BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17325
(461 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242019639|ref|XP_002430267.1| low-density lipoprotein receptor, putative [Pediculus humanus
corporis]
gi|212515374|gb|EEB17529.1| low-density lipoprotein receptor, putative [Pediculus humanus
corporis]
Length = 4568
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/377 (56%), Positives = 260/377 (68%), Gaps = 56/377 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V++RCVN++ VCDGK DCPNGADEGPGCDLAEC H+ GLCSN C TP+GA+CTCPPGE
Sbjct: 1269 VSERCVNISVVCDGKADCPNGADEGPGCDLAECNHRSGLCSNGCKQTPVGAVCTCPPGET 1328
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
LSND+ TCQD+NECE+P CSQ C NTKGSY C+C++GY LE + H CKAINHS+AFLII
Sbjct: 1329 LSNDTYTCQDLNECEKPESCSQHCHNTKGSYYCTCDDGYELELNKHFCKAINHSSAFLII 1388
Query: 121 SNRHSILVADLEEKG-------------------------------------KDHRAQDI 143
SNRHSILVADL+E+G + +DI
Sbjct: 1389 SNRHSILVADLKEQGLERVPIIVENVVATASNMHTGTIFWSDMKLKKISRLDRSSEPKDI 1448
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ +GLDLVEGLAYDWIGG+IYWLDSRLN IEV ENG++R+VL K+NITQPRGM LDPSP
Sbjct: 1449 ITNGLDLVEGLAYDWIGGNIYWLDSRLNTIEVARENGSDRMVLLKENITQPRGMCLDPSP 1508
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G WLFW+DWGENPRIER+GMDG NRSTII+TKIYWPNGLTLD+AT+R+YFADSKLD+ID
Sbjct: 1509 G--WLFWSDWGENPRIERVGMDGLNRSTIINTKIYWPNGLTLDVATKRIYFADSKLDYID 1566
Query: 264 ------CKSLEIKTNVNY------STIFR-KLYWIDEGGNGVPLKIGKANMDGSNASILV 310
++ +Y T+F LYW D N V + G N ++ V
Sbjct: 1567 FCYYNGSGRQQVLAGSHYLLHPHSLTLFEDTLYWTDRQLNRV---LSAQKFRGKNQTV-V 1622
Query: 311 SGQLYEALALDLENGML 327
S + + L++ + + L
Sbjct: 1623 SHLISQPLSIHVHHPAL 1639
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 155/311 (49%), Gaps = 47/311 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C++ VC+ +DC + +DE C++ EC K + C++ C T C C G L
Sbjct: 3039 KCIDYHLVCNKVSDCADDSDEPLHCNVDECAKVEIHQCNHKCVNTLTSYYCECNQGYKLM 3098
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYV-LEYDNHTCKAINHSAAFLII 120
D C+D++EC E PG CSQ C+NT G Y C CN+ Y E D +CK + +LI
Sbjct: 3099 PDGKACRDIDECTELPGACSQYCSNTPGGYYCKCNDKYYEREQDERSCKRKDRIQPWLIF 3158
Query: 121 SNRH--------------------SILVADLEEKGK-----DHRAQDIVVSGLDLV---- 151
+N++ +++ D + K K D A+ I S +D +
Sbjct: 3159 TNKYYVRNMSTDASVYSLVHKDLINVVALDYDLKDKKLYFCDVSAKTIFRSDIDGIDVKE 3218
Query: 152 ----------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
EG+A DW+G +YWLD +EV + NG NR L K I PR + +
Sbjct: 3219 PVIRHDSHGLEGIAVDWVGRKLYWLDRHSKHLEVSELNGVNRKTL-KSGIADPRAIAV-- 3275
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKL 259
PG +L++T W I +IGMDGSN + I++ I WPN LT+D T R+YFAD+ L
Sbjct: 3276 HPGVGYLYFTSWHLQAYIGKIGMDGSNFTRILTWNDDIAWPNALTIDYFTDRIYFADAHL 3335
Query: 260 DFIDCKSLEIK 270
D+I LE K
Sbjct: 3336 DYIAYTDLEGK 3346
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 166/365 (45%), Gaps = 70/365 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C++ +++CDGK DC + ADE GC C C C + G C CP G +SN
Sbjct: 223 KCISRSQLCDGKKDCEDSADEETGC----CNCPLLGCEYKCQASLTGGSCYCPEGSTISN 278
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC D +EC + G+C Q+C+N G+Y CSC GYVL +N C+A N S ++ +
Sbjct: 279 DTKTCVDRDECSEWGFCEQLCSNFPGNYKCSCTSGYVL-LENSYCRAPNGSNVKILFA-- 335
Query: 124 HSILVADLEEKGKDHR--AQDIVVSGLDL------------------------------- 150
H V LE++G A SGLD
Sbjct: 336 HDKSVWSLEQQGGSQTLLANATQASGLDYHYERKLLFWSDTKTRKVYSQPLFGEGSEGSG 395
Query: 151 ----------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+A DWIG +Y D +I+V + +G ++ N+T P + LD
Sbjct: 396 SEISLPGTWSPVSIAIDWIGDKVYVTDGIGQKIDVFEIDGRWHAIVLGSNLTSPADIGLD 455
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G ++F D + + R MDG+N I++ Y +G+++DI ++RV++ DS LD
Sbjct: 456 PTSG--YMFIADGNQ---VLRANMDGTNVRAIVADATYKASGVSIDIISKRVFWCDSLLD 510
Query: 261 FIDCKSLEIKTNV------------NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
+I+ E K V +T +L+W D GV + + K G+N+ +
Sbjct: 511 YIETVDYEGKGRVLILRGQSVPSPSRLTTFENRLFWSDSTKQGV-MSVDK--YQGANSIL 567
Query: 309 LVSGQ 313
V Q
Sbjct: 568 AVYRQ 572
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 173/392 (44%), Gaps = 91/392 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLA-ECKHKF-GLCSNTCH------PTPLGALCTC 55
+C++++KVCD DC + +DE GC A EC + G C C + G +CTC
Sbjct: 3906 KCIDISKVCDFGDDCGDASDEK-GCHRAHECDAETRGGCEQNCENIDGPGSSLKGFICTC 3964
Query: 56 PPG-EILSNDSVTCQDMNECEQPGY-CSQMCTNTKGSYICSCNEGYVLEYDNHT--CKAI 111
PG +I + C D++ECE + CSQ+CTN G+Y+CSC EG+ L D T CK
Sbjct: 3965 LPGFKISDKNKKKCDDVDECETGTHKCSQICTNLNGTYVCSCREGFTLS-DTLTGVCKLN 4023
Query: 112 NHSAAFLIISNRHSILVADLEEKGK----------------------------------- 136
+ L+ SN I +E++ +
Sbjct: 4024 EPESLTLLFSNGPQIRAYKMEKREELNVISEEKRISSIDFDPKQEMIFWVDSYDNTLKRS 4083
Query: 137 ---DHR--------AQDIVVSGLDLVEGLAYDWIGGHIYWLD----SRLN--RIEVCDEN 179
D R QD+ + ++ DW+ +IYW + S+ N ++ V +
Sbjct: 4084 YMVDARQGVVKAGYPQDLNIRAHAKPTSVSVDWVSNNIYWTEVQPTSQKNKGKVVVAKSD 4143
Query: 180 GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYW 239
G R L +N+ P + +DP G +FW D G +P+IE +DGS R+TI + +
Sbjct: 4144 GRYRRSLVSNNLESPTSIAVDPELGK--MFWADSGYSPKIESSWLDGSMRTTIATDGVGH 4201
Query: 240 PNGLTLDIAT-RRVYFADSKLDFIDCKSLE------------IKTNVNYSTIFRKLYWI- 285
P GL +D + ++Y+AD+KL+ I+ + + +K V+ ++W+
Sbjct: 4202 PTGLAIDFSMDNKIYWADTKLNTIESMNYDGSGRQVIIKGDYLKHPVSLDVFESSVFWVT 4261
Query: 286 ---------DEGGNGVPLKIGKANMDGSNASI 308
D+ G G P+ + K ++ S+ +
Sbjct: 4262 RDTGEVVKQDKFGRGDPVVVAKDLLNPSDVKV 4293
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 116/463 (25%), Positives = 178/463 (38%), Gaps = 126/463 (27%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLA--------------ECKHKFGLC--SNTCHPT 47
RC+N+ +CD DC +G DEG C+ +C K C + C
Sbjct: 2956 RCINMGWLCDHDNDCGDGTDEGKFCNAQYKTCTPEEFSCQNFKCIRKIYQCDGEDDCGDN 3015
Query: 48 PLGALC-----TCPPGEILSNDS------VTCQDMNEC----EQPGYCS----------- 81
C TCP G+ ND + C +++C ++P +C+
Sbjct: 3016 SDEVGCSKTNSTCPNGQFRCNDGKCIDYHLVCNKVSDCADDSDEPLHCNVDECAKVEIHQ 3075
Query: 82 --QMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHR 139
C NT SY C CN+GY L D GK R
Sbjct: 3076 CNHKCVNTLTSYYCECNQGYKLMPD------------------------------GKACR 3105
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
D + GG+ + + E DE R KD I QP
Sbjct: 3106 DIDECTELPGACSQYCSNTPGGYYCKCNDKYYEREQ-DERSCKR----KDRI-QP----- 3154
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--- 256
WL +T+ + + D S S ++ + L D+ +++YF D
Sbjct: 3155 -------WLIFTN---KYYVRNMSTDASVYS-LVHKDLINVVALDYDLKDKKLYFCDVSA 3203
Query: 257 -----SKLDFIDCKSLEIKTN------VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305
S +D ID K I+ + + + RKLYW+D + + + ++G N
Sbjct: 3204 KTIFRSDIDGIDVKEPVIRHDSHGLEGIAVDWVGRKLYWLDRHSKHLEV----SELNGVN 3259
Query: 306 ASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS- 364
L SG + + A+ + G+ Y L++T W I +IGMDGSN + I++
Sbjct: 3260 RKTLKSG-IADPRAIAVHPGVGY---------LYFTSWHLQAYIGKIGMDGSNFTRILTW 3309
Query: 365 -TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I WPN LT+D T R+YFAD+ LD+I + + +G R V+
Sbjct: 3310 NDDIAWPNALTIDYFTDRIYFADAHLDYIAYTDLEGKHRHIVL 3352
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 112/229 (48%), Gaps = 46/229 (20%)
Query: 78 GYCSQMCTNTKG-SYICSCNEGYVLEYDNHTCK----------------AINHSAAFL-- 118
G CSQ+C ++G S +C+C+ GY E + + ++ SA +
Sbjct: 1976 GGCSQICIPSEGNSRVCACSVGYKKENEVNCSPYKTFAVVSQLDLIRGYSLKDSAEAMVP 2035
Query: 119 IISNRHSILVADLE---------EKGKDH------------RAQDIVVSGL--DLVEGLA 155
I H IL D+ E + H Q ++ G+ + + G+A
Sbjct: 2036 ITGPGHHILHVDVHFAQNWIYWVEFNRGHWNGIFRIRPNGSEIQSVIKEGIGSNGIRGIA 2095
Query: 156 YDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
DWI G++Y+ + N +EVC +G+NR V+ K PR + ++P ++L+W D+
Sbjct: 2096 IDWIAGNLYFTNVFPHENYLEVCWLDGSNRKVIYKTTTDAPRELAVNPI--KKYLYWIDY 2153
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G+ PRI + +DG++ + ++++ I P LT+D+ T VY+ DSK+D I
Sbjct: 2154 GQYPRIGKAYLDGTHWTPVVTSGITNPRDLTVDMLTHDVYWVDSKMDVI 2202
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 183/484 (37%), Gaps = 107/484 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALC-----TCPPG 58
RC+ +CDG +C +G+DE + C + C+ C C G
Sbjct: 3861 RCIPRYHLCDGVDNCGDGSDER---NSTVCSFRNKPCNRDREFQCANKKCIDISKVCDFG 3917
Query: 59 EIL--SNDSVTCQDMNEC--EQPGYCSQMCTNTKGS------YICSCNEGYVLEYDNHT- 107
+ ++D C +EC E G C Q C N G +IC+C G+ + N
Sbjct: 3918 DDCGDASDEKGCHRAHECDAETRGGCEQNCENIDGPGSSLKGFICTCLPGFKISDKNKKK 3977
Query: 108 ------CKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGG 161
C+ H + I +N + V E G L + L
Sbjct: 3978 CDDVDECETGTHKCS-QICTNLNGTYVCSCRE-------------GFTLSDTLT------ 4017
Query: 162 HIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIER 221
VC N + L N Q R ++ + E RI
Sbjct: 4018 ------------GVCKLNEPESLTLLFSNGPQIRAYKMEKREELNVI-----SEEKRISS 4060
Query: 222 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC---KSLEIK-----TNV 273
I D I+W + + D +R Y D++ + + L I+ T+V
Sbjct: 4061 IDFDPKQE------MIFWVD--SYDNTLKRSYMVDARQGVVKAGYPQDLNIRAHAKPTSV 4112
Query: 274 NYSTIFRKLYW--IDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYY 329
+ + +YW + K+ A DG LVS L ++A+D E G +
Sbjct: 4113 SVDWVSNNIYWTEVQPTSQKNKGKVVVAKSDGRYRRSLVSNNLESPTSIAVDPELGKM-- 4170
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT-RRVYFADSK 388
FW D G +P+IE +DGS R+TI + + P GL +D + ++Y+AD+K
Sbjct: 4171 ---------FWADSGYSPKIESSWLDGSMRTTIATDGVGHPTGLAIDFSMDNKIYWADTK 4221
Query: 389 LDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDL-ENGMLYYSTEGAEFLK 447
L+ I+ NYDG+GRQ +I D + ++LD+ E+ + + + + E +K
Sbjct: 4222 LNTIESMNYDGSGRQVIIKGDYLKH------------PVSLDVFESSVFWVTRDTGEVVK 4269
Query: 448 TPLF 451
F
Sbjct: 4270 QDKF 4273
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 96/234 (41%), Gaps = 52/234 (22%)
Query: 78 GYCSQMCTNTKG-------SYICSCNEGYVLEYDNHTCKAINH----------------- 113
G C MC T +Y C+CN G+ L D C +
Sbjct: 601 GGCQHMCIVTAPTEGTGHLAYRCACNIGWRLASDQRNCNLVTEFLMYSQQRFIKGRVLDP 660
Query: 114 ------SAAFLIISNRHSILVADLEEKGKDHRAQDIV------------------VSGLD 149
A ++S R + D + + + D++ S +
Sbjct: 661 VIKGFAEAMLPVVSRRARFVGLDFDAQDQHVYYSDVLQDVIYRTHLNGTGREIVLASQNE 720
Query: 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
VEGLA DW ++Y++DSR + V N T + L K N+ +PR +++ P+ G ++
Sbjct: 721 GVEGLAVDWAAKNLYYIDSRKGTLNVLSMRNVTYKRTLLK-NLKRPRAIVVHPNKG--YI 777
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
F+++W I R DGS + + WPNGL LD T R+Y+ D+ LD +
Sbjct: 778 FFSEWDRPANISRANSDGSGLMVFKNVTLGWPNGLALDYETDRLYWCDALLDHV 831
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 110/251 (43%), Gaps = 64/251 (25%)
Query: 69 QDMNECEQ--PGYCSQMCTN--TKGSYI------CSCNEGYVLEYDNHTCKAINHSAAFL 118
+D N C++ G CSQ+C + T GSY C C G V D C + FL
Sbjct: 2279 EDYNPCKRLGNGGCSQLCFSYPTNGSYSSAPSFKCDCAIGSVSPDDQKKCTTYDE---FL 2335
Query: 119 IISNRHSILVADLEEK----------------GKDHRAQD-------------------- 142
+ S R I DL+ + G D D
Sbjct: 2336 VFSTRTEIRAIDLDPRSTVIPFKPLANLTNVVGVDFDYDDKKLLFTQIRPWARIAWTSSK 2395
Query: 143 -------IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
I+ G++ EG+AYDW IYW DS N I + + ++ +++A+ + +PR
Sbjct: 2396 NPDTIHNIINRGIN-PEGIAYDWTQKKIYWTDSSNNSIYAMNLDNSDLVMIAR--VERPR 2452
Query: 196 GMMLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
++LDP G+ L++TDWG + +I R M GS + II + P+GL +D + R +
Sbjct: 2453 AIVLDPCNGS--LYYTDWGRFGTSGKIYRTTMAGSLKKAIIEKDLSQPSGLAIDYSERML 2510
Query: 253 YFADSKLDFID 263
Y+ D+ + I+
Sbjct: 2511 YWTDAVREKIE 2521
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 132/341 (38%), Gaps = 68/341 (19%)
Query: 91 YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDL 150
Y C C G+ + K +AFL++ I+ L K VV G++
Sbjct: 1666 YTCKCKPGFKTSPNG---KCTEEESAFLMVMKGSQIIDVSLTPGDKTGGFLTAVV-GIEG 1721
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCD------ENGTNRIVLAKDNITQPRGMMLDPSPG 204
L YD IYW++ + + E C G L KD+ G++ G
Sbjct: 1722 GLHLDYDRKMQTIYWVEGKEDDEENCTIYVTPYGGGNKTEFLGKDS-----GLV-----G 1771
Query: 205 TRWLFWTDW-GENPRI--------ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ DW G N I E I +DG + I I +G L +A +
Sbjct: 1772 AAYTIAFDWLGRNLYIANRIASNFELIKVDGKVKHRTI---ILANDGNKLSVAKPKSMCL 1828
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG-QL 314
D KLYW+DEGG GVP K+ K NMDGSN IL + +
Sbjct: 1829 DPSEG--------------------KLYWVDEGGYGVPAKVAKVNMDGSNPEILTTDIER 1868
Query: 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPNGL 373
EA+ +DL+ +LYYS +P I+ + +G N ++S +
Sbjct: 1869 PEAITIDLDKKILYYSM-------------RHPGYIKSMATNGENIRVLLSEENNLQQPK 1915
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
L + R+++ D D I+ + TG +++D V+
Sbjct: 1916 ALAVVDSRLFYLDPIYDKIERVDLP-TGENPKLILDNEVDL 1955
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+ Y +K+YW D N I N+D S+ ++ + A+ LD NG LYY+
Sbjct: 2413 IAYDWTQKKIYWTDSSNNS----IYAMNLDNSDLVMIARVERPRAIVLDPCNGSLYYTD- 2467
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
W +G + +I R M GS + II + P+GL +D + R +Y+ D+ + I
Sbjct: 2468 -------WGRFGTSGKIYRTTMAGSLKKAIIEKDLSQPSGLAIDYSERMLYWTDAVREKI 2520
Query: 393 DFCNYDGTGRQQVI 406
+ +GT RQ ++
Sbjct: 2521 ERSFLNGTFRQVLV 2534
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 45/70 (64%)
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
++L+W D+G+ PRI + +DG++ + ++++ I P LT+D+ T VY+ DSK+D I
Sbjct: 2146 KYLYWIDYGQYPRIGKAYLDGTHWTPVVTSGITNPRDLTVDMLTHDVYWVDSKMDVIQKI 2205
Query: 396 NYDGTGRQQV 405
+ G RQ +
Sbjct: 2206 GFSGGARQVI 2215
>gi|328709384|ref|XP_001944217.2| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Acyrthosiphon pisum]
Length = 4640
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/377 (56%), Positives = 247/377 (65%), Gaps = 55/377 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
+RCVN+T VCDG CPNGADEGP CDL EC + CSN C TP+G LCTCP GE+
Sbjct: 1331 ATNRCVNITNVCDGIPHCPNGADEGPNCDLPECDKEGSYCSNGCKQTPVGPLCTCPHGEV 1390
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
L N + C D+NEC+ PG CSQ C NTKGSY CSC GYVLE D HTCKA+NHSAAFLII
Sbjct: 1391 L-NTTYECMDLNECDPPGLCSQHCVNTKGSYFCSCAPGYVLESDKHTCKALNHSAAFLII 1449
Query: 121 SNRHSILVADLEEKG-------------------------------------KDHRAQDI 143
SNRHSILVADL+E+G K +DI
Sbjct: 1450 SNRHSILVADLKEQGLERVPIIVENVVATASNMHTGTIFWSDMKLKKISRLDKSSEPKDI 1509
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ SGLDLVEGLAYDWIGGHIYWLDSRLN +EV +ENGTNRI+L K+NITQPRGMMLDPSP
Sbjct: 1510 ITSGLDLVEGLAYDWIGGHIYWLDSRLNTVEVANENGTNRIILLKENITQPRGMMLDPSP 1569
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G RWLFWTDWGENPRIER+GMDGSNRS IIS+KIYWPNGLTLDI +RVYFADSKLDFID
Sbjct: 1570 GARWLFWTDWGENPRIERVGMDGSNRSVIISSKIYWPNGLTLDIVNQRVYFADSKLDFID 1629
Query: 264 ------CKSLEIKTNVNY------STIFR-KLYWIDEGGNGVPLKIGKANMDGSNASILV 310
++ +Y T+F LYW D N V + G N ++ V
Sbjct: 1630 FCYYNGTGRQQVIAGSHYLLHPHSLTLFEDTLYWTDRQLNRV---LSAHKFKGKNQTV-V 1685
Query: 311 SGQLYEALALDLENGML 327
S + + L++ + + L
Sbjct: 1686 SHLISQPLSIHVHHPSL 1702
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 133/449 (29%), Positives = 196/449 (43%), Gaps = 100/449 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+N T VC+ +DC + +DE C++ EC + C++ C TP G C C G L
Sbjct: 3115 QCINATLVCNKVSDCADDSDEPAHCNVDECARVELNQCAHRCVDTPTGFTCECNEGYKLM 3174
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYV-LEYDNHTCKAINHSAAFLII 120
D C D+NEC E PG CSQ C NT GS+ C C+E Y D TCK + + +LI
Sbjct: 3175 EDGKACDDINECVEVPGACSQYCLNTPGSFYCKCDETYYDRTSDERTCKRRDRNKPWLIF 3234
Query: 121 SNRHSILVADLEEKGKDHRAQDIV-VSGLDL----------------------------- 150
+N++ + L+ QD++ V LD
Sbjct: 3235 TNKYYVRNMSLDASEYSLNHQDLLNVVALDFDYSEEKLYFCDVSAKTIYRTKVGSTEREK 3294
Query: 151 --------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+EG+A DW+G +YWLD +EV + NGTNR L K I PR + +
Sbjct: 3295 IIRHDSHGLEGIAVDWVGRKLYWLDRHSKHLEVAELNGTNRRTL-KAGIQDPRALAV--H 3351
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK--IYWPNGLTLDIATRRVYFADSKLD 260
PGT +L++T W I +IGMDGSN + I++ + I WPN LT+D T R+Y+AD+ LD
Sbjct: 3352 PGTGYLYFTSWHLQAYIGKIGMDGSNFTQILTHENDIAWPNALTIDYFTERIYWADAHLD 3411
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ-LYEALA 319
+ I A+++G + I++SG+ + A
Sbjct: 3412 Y----------------------------------IASADLEGRHKHIVLSGERVPHVFA 3437
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L L + LFWTDW ++ G N I+ + P L
Sbjct: 3438 LTLFDDE-----------LFWTDWNLKAIVKSNKFTGQNYR-ILRNTTHRPYDL------ 3479
Query: 380 RRVYFADSKLDFIDFCNYDGTGRQQVILI 408
VY ++ F + C D G + L+
Sbjct: 3480 -HVYHNLRQIPFSNPCGDDNGGCSHLCLL 3507
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 157/348 (45%), Gaps = 67/348 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C+N +++CDG DC + ADE C C G C C +P G C C G ++N
Sbjct: 278 KCINKSQLCDGHKDCEDNADEEAACSTLSCP-ALG-CEYKCQASPTGGSCYCAEGRKIAN 335
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF------ 117
DS TC D +EC + G+C QMC N++GSY CSC GYVL D C A N + F
Sbjct: 336 DSKTCIDRDECSEWGFCEQMCKNSEGSYTCSCYPGYVL-MDRKKCVANNRTQPFQVYFAQ 394
Query: 118 --------------LIISNRHS---------------------------ILVADLEEKGK 136
++++N S +L AD +
Sbjct: 395 DKNIMKMDSKYQNQVVVANATSASGMDYHYAFNTLYWSDVKLKKIKSVRLLDADKFVRDG 454
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ +I + G+ +A DW+G +Y +D +++V + NG ++ N+T P
Sbjct: 455 NAMPPEITLPGMWEPISVAVDWVGNKLYVVDGVGQKVDVFELNGQYHAIVLSSNLTNPSD 514
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ LDP+ G ++F D + + R MDGS+ I++ +Y +G++ DI RR+Y+ D
Sbjct: 515 IALDPTQG--YMFIADGNQ---LIRANMDGSDTKAIVTDAVYKASGVSADILDRRLYWCD 569
Query: 257 SKLDFIDC------------KSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
S LD+++ + ++ + + ++YW D G+
Sbjct: 570 SLLDYVETVDYDGNDRHLILRGPQVPSPSRLAVFENRVYWSDGTKQGI 617
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 166/376 (44%), Gaps = 84/376 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC--KHKFGLCSNTCHPTPLGA--LCTCPPGE 59
CVN +K+C+ + DC + +DE GC + + G C + C G C C G
Sbjct: 3986 ECVNKSKLCNLQYDCGDLSDE-KGCHYSGTCLESTKGGCEHYCLNVTSGKGFSCACYAGY 4044
Query: 60 ILSNDSVTCQDMNECEQP-GYCSQMCTNTKGSYICSCNEGYVL-EYDNHTCKAI------ 111
+ +S C+D++EC+ +CSQ CTN GS+ICSC EG+VL + + CKA+
Sbjct: 4045 EIGENSKKCEDLDECQLGLHHCSQDCTNINGSFICSCREGFVLSDLFSGVCKAVDPMLTI 4104
Query: 112 -------------NHSAAFLIISNRHSILVADLEEKG----------------------- 135
N I+SN I D + K
Sbjct: 4105 VYTNGPELRGYESNERKHLSILSNEKRIRAIDFDPKSEILYWADSYDQSIKRSYMINAKS 4164
Query: 136 ---KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN-------RIEVCDENGTNRIV 185
K QD+ + G +A DW+G ++YW + L+ RI V ++G R
Sbjct: 4165 GQVKVGYPQDLDIKGPFKPVAVAIDWMGDNLYWAEVDLSKEDKPAGRIMVAKQDGRYRRS 4224
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
+ + P ++LDP G +FW D GE P+IE MDGS + ++++T++++P GLT+
Sbjct: 4225 IVSSGLDTPSSLVLDPEMGK--MFWADVGETPKIEMSWMDGSRQKSLVTTRLHYPTGLTV 4282
Query: 246 DIAT-RRVYFADSKLDFIDCKSLEIKTNV------------NYSTIFRKLYWI------- 285
D A +Y+ D+KL+ I+ + K V + +LYW+
Sbjct: 4283 DTAMDHSLYWVDTKLNVIESIKYDQKNRVVVIRGEHLHHPISLDLFENQLYWLSRETGEL 4342
Query: 286 ---DEGGNGVPLKIGK 298
D+ G GVP+ I K
Sbjct: 4343 IKQDKFGRGVPVTIAK 4358
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 124/256 (48%), Gaps = 55/256 (21%)
Query: 80 CSQMCTNTKGS-----YICSCNEGYVLEYDNHTC-----------------KAINHSA-- 115
C MC T+GS + C+CN GY L D H C K +N +
Sbjct: 665 CHHMCIVTRGSDNLLAHRCACNMGYQLAQDMHNCILVDEFLLYSQQRFIKGKVLNKVSQG 724
Query: 116 ---AFLIISNRHSILVADLEEKGKD----------------HR---AQDIVVSGLDL-VE 152
A L +S+R + V L+ +D HR ++IV++ + VE
Sbjct: 725 FTDAILPVSSRRARFVG-LDFDARDNYIYYSDVLQDVIYRIHRNGTGREIVLASQNEGVE 783
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
GLA DW+ ++Y++DSR + V N TN+ VL K N+ +PR +++ P+ G ++F++
Sbjct: 784 GLAVDWVAKNLYYIDSRKGTLNVLSTRNVTNKRVLLK-NMKRPRAIVVHPNKG--YIFFS 840
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
+W I R DGSN + + WPNGL +D AT R+Y+ D+ LD + +L+ T
Sbjct: 841 EWDRPANISRAYTDGSNLIVFRNITLGWPNGLAVDFATDRLYWCDALLDHVQHSNLD-GT 899
Query: 272 NVNY--STIFRKLYWI 285
+V ST+ R + I
Sbjct: 900 DVRTINSTLIRHPFSI 915
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 114/268 (42%), Gaps = 64/268 (23%)
Query: 78 GYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIISN-------------- 122
G C Q C ++ S +C+C+ GY E+D K HS+ F I+S
Sbjct: 2046 GGCQQFCIPSENSNRVCACSVGYKKEFD---IKCTPHSS-FAIVSQVDLVRGYSLTDTLD 2101
Query: 123 --------RHSILVADLEE---------------------KGKDHRAQDIVVSGL--DLV 151
H IL D+ + Q I+ G+ + +
Sbjct: 2102 AIVPISGPGHHILHVDVHVSQNWIYWVEFNRGIWNGIYRIRPNGTELQHIIKDGIGSNGI 2161
Query: 152 EGLAYDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
GL DWI G++Y+ + N +EVC +G+ R VL K P+ + ++P R L+
Sbjct: 2162 RGLTIDWIAGNMYFTNVFPHENYVEVCWLDGSMRKVLVKTTTDAPKELAVNPI--KRLLY 2219
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE- 268
W D+G+ P+I + +DGSN I++T I P LT+D+ T VY+ D++LD I S
Sbjct: 2220 WIDYGQYPKIGKAYLDGSNWMPIVTTGISQPRDLTVDMVTHDVYWVDARLDLIQKVSASG 2279
Query: 269 ---------IKTNVNYSTIFRKLYWIDE 287
I + + +YW+D
Sbjct: 2280 GERQVVRRNIPNPMGIAIHLSDMYWVDR 2307
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 150/354 (42%), Gaps = 62/354 (17%)
Query: 72 NECEQPGYCSQMC---TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILV 128
N CE C Q+C +T Y C C GY + D C I + + FL++ + I+
Sbjct: 1708 NPCEN-ATCEQLCLLSPSTPNGYTCKCKPGYRV--DGGQC--IENESPFLLVMRGYQIID 1762
Query: 129 ADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK 188
L G + + G++ + YD ++W++ E N N ++
Sbjct: 1763 VSLT-PGDKTTGHIVPIVGIEGGTQVDYDTETKSLFWVEGLKVNEEDESVNSVNCTLMMS 1821
Query: 189 DNITQPRGMMLDPSPG---TRWLFWTDWG---------ENPRIERIGMDGSNRSTIISTK 236
+ +L G ++ DW E+ +E + +DG N+ ++
Sbjct: 1822 PYHGGNKSSLLGELTGFVGAPYVIAFDWNGRNLYIGNRESSSLEVVKVDGMNKYRMV--- 1878
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI 296
+ NG + +AT T + KLYW D+GG GVP KI
Sbjct: 1879 LLSNNGKDISVAT--------------------PTGIVLDPNEGKLYWADQGGFGVPPKI 1918
Query: 297 GKANMDGSNASILVS-GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
GK NMDGSN +L++ G EA+A+DLE +YYST + N I+ + +
Sbjct: 1919 GKINMDGSNPQVLINDGHTPEAIAIDLEQKNIYYST----------QYPSN--IKVMSVS 1966
Query: 356 GSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY-DGTGRQQVI 406
G N T++S I +P ++ I R +YF DS+ D + N DG+ ++++
Sbjct: 1967 GMNHRTLMSDYNSIAFPK--SMGIYDRYLYFIDSRYDHLVRVNAEDGSNMEKIL 2018
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 42/185 (22%)
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EG++YDW IYW DS N I + +GT +++A+ + +PR +++DP GT L++T
Sbjct: 2482 EGISYDWTQKKIYWTDSSNNSIYAMNIDGTEVVMIAR--VERPRAIVVDPCNGT--LYFT 2537
Query: 212 DWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
DWG +I R M GS + II + P+GLT+D + +Y++D+
Sbjct: 2538 DWGRFGTAGKIFRTTMAGSLKKAIIDRDLSQPSGLTIDFDDQMLYWSDA----------- 2586
Query: 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLY 328
V KI ++ +DG N +L++ +Y AL + +Y
Sbjct: 2587 -----------------------VREKIERSTLDGGNREVLITATIY-PFALTVHGNYIY 2622
Query: 329 YSTLK 333
++ L+
Sbjct: 2623 WTDLQ 2627
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 13/149 (8%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
++Y +K+YW D N I N+DG+ ++ + A+ +D NG LY++
Sbjct: 2484 ISYDWTQKKIYWTDSSNNS----IYAMNIDGTEVVMIARVERPRAIVVDPCNGTLYFTD- 2538
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
W +G +I R M GS + II + P+GLT+D + +Y++D+ + I
Sbjct: 2539 -------WGRFGTAGKIFRTTMAGSLKKAIIDRDLSQPSGLTIDFDDQMLYWSDAVREKI 2591
Query: 393 DFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+ DG G ++V++ + F + G+
Sbjct: 2592 ERSTLDG-GNREVLITATIYPFALTVHGN 2619
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 34/168 (20%)
Query: 240 PNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRK-----------LYWIDEG 288
P G++ D +++Y+ DS + I +++ V + + R LY+ D G
Sbjct: 2481 PEGISYDWTQKKIYWTDSSNNSIYAMNIDGTEVVMIARVERPRAIVVDPCNGTLYFTDWG 2540
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
G KI + M GS ++ L + L +D ++ MLY W+D
Sbjct: 2541 RFGTAGKIFRTTMAGSLKKAIIDRDLSQPSGLTIDFDDQMLY-----------WSD-AVR 2588
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTL--------DIATRRVYFAD 386
+IER +DG NR +I+ IY P LT+ D+ R VY A+
Sbjct: 2589 EKIERSTLDGGNREVLITATIY-PFALTVHGNYIYWTDLQLRGVYRAE 2635
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 79/208 (37%), Gaps = 52/208 (25%)
Query: 267 LEIKTNVNYSTIFRKLYWI--------DEGGNGVPLKIGKANMDGSNASILVS------G 312
+E T V+Y T + L+W+ DE N V + + G N S L+ G
Sbjct: 1781 IEGGTQVDYDTETKSLFWVEGLKVNEEDESVNSVNCTLMMSPYHGGNKSSLLGELTGFVG 1840
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII-------ST 365
Y +A D LY E+ +E + +DG N+ ++
Sbjct: 1841 APY-VIAFDWNGRNLYIGNR------------ESSSLEVVKVDGMNKYRMVLLSNNGKDI 1887
Query: 366 KIYWPNGLTLDIATRRVYFADSK----LDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+ P G+ LD ++Y+AD I N DG+ Q L+ D
Sbjct: 1888 SVATPTGIVLDPNEGKLYWADQGGFGVPPKIGKINMDGSNPQV-------------LIND 1934
Query: 422 NGVP-ALALDLENGMLYYSTEGAEFLKT 448
P A+A+DLE +YYST+ +K
Sbjct: 1935 GHTPEAIAIDLEQKNIYYSTQYPSNIKV 1962
>gi|307171853|gb|EFN63508.1| Low-density lipoprotein receptor-related protein 2 [Camponotus
floridanus]
Length = 4578
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/382 (54%), Positives = 252/382 (65%), Gaps = 54/382 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V + CVN++ VCDGK DCPNGADEGPGCD AEC H+ GLCSN C TPLGA C CP GE
Sbjct: 1291 VTNVCVNVSTVCDGKLDCPNGADEGPGCDFAECNHQSGLCSNGCIRTPLGAQCVCPAGEE 1350
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
L++D TCQDMNECE PG CSQ+C NTKGSY C+C +GY L+ D HTCKA NH+ AFLII
Sbjct: 1351 LTSDGYTCQDMNECETPGRCSQICVNTKGSYFCNCVDGYTLQKDKHTCKAYNHTTAFLII 1410
Query: 121 SNRHSILVADLEEKG-------------------------------------KDHRAQDI 143
SNRH+ILVADL+E+ + QDI
Sbjct: 1411 SNRHTILVADLQEQALERVPINVENVVATASNMHTGTIFWSDMKLKRISRLDRGSDPQDI 1470
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ +GLDLVEGLAYDWIG ++YWLDS+LN IEV E G R++L K+NITQPRGM LDPSP
Sbjct: 1471 ISTGLDLVEGLAYDWIGQNLYWLDSKLNTIEVAKETGIGRMILVKENITQPRGMCLDPSP 1530
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G RWLFWTDWGENPRIERIGMDG+NRSTIISTKIYWPNGL LDIA RR+YFADSKLDFID
Sbjct: 1531 GARWLFWTDWGENPRIERIGMDGTNRSTIISTKIYWPNGLALDIANRRIYFADSKLDFID 1590
Query: 264 ------CKSLEIKTNVNY------STIFR-KLYWIDEGGNGVPLKIGKANMDGSNASILV 310
K +++ +Y T+F +YW D N V + G N ++ V
Sbjct: 1591 TCLYDGSKRIQVLAGSHYLLHPHSLTLFEDTMYWTDRQLNRV---LSAHKFKGVNQTV-V 1646
Query: 311 SGQLYEALALDLENGMLYYSTL 332
S + + L++ + + +L T+
Sbjct: 1647 SHLISQPLSIHVHHPVLQPITV 1668
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 179/377 (47%), Gaps = 68/377 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+N +++CD K DC +GADEG C ++ C G C + C +P+G C CP G IL+ND
Sbjct: 234 CINRSQLCDEKQDCEDGADEGATCSMSMCD-SLG-CQHKCQASPIGGTCYCPEGRILAND 291
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC D +EC + G+C Q+C NT GSYIC C GY+L N C+A N S L+++
Sbjct: 292 SRTCIDRDECSEWGFCEQLCENTDGSYICHCASGYILHGRN-KCRAQNISVLELLLAQDR 350
Query: 125 SILVADLEEKGKDHR--AQDIVVSGLDLVE------------------------------ 152
++ L G+D R A SG+D +
Sbjct: 351 AVWR--LSATGEDRRIIANTTGASGIDYLYSRNLLFWSDTKTRKVHSESFYGNGEIPKVD 408
Query: 153 ----------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+A DWIG +Y +DS + +I+V + NG ++ N+T P + LDP+
Sbjct: 409 ISMAGSWGPVSIAVDWIGEKLYVVDSIVQKIDVFELNGRYHGIVVGSNLTSPADIALDPT 468
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G ++ ++ ++ R MDG+N ++S Y +G+ +DI +R+Y+ DS LD+I
Sbjct: 469 RGVMFI-----ADSKQVLRTNMDGTNAFPVVSEAAYKVSGVAVDIIAKRIYWCDSLLDYI 523
Query: 263 DC------------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
+ + L++ + + + +++W D G + + N SI
Sbjct: 524 ETADYRGHNRIMILRGLQVPSPIRLTLFENRIFWTD----GTKQAVMSVDKTQGNYSIQS 579
Query: 311 SGQLYEALALDLENGML 327
++ +A A+ + +L
Sbjct: 580 VFKVRDAKAIKALHPLL 596
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 160/380 (42%), Gaps = 88/380 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTCHP-TPLGALCTCPPGEIL 61
+C+ T++CD DC + +DE C + G C++ CH T G +C C PG I+
Sbjct: 3932 KCIARTRLCDLADDCGDLSDELGCHHTHHCSMNDRGGCAHECHNITNGGYICACYPGYII 3991
Query: 62 SNDSVT-CQDMNECEQPGY-CSQMCTNTKGSYICSCNEGYVLEYDNHT--CKAINHSAAF 117
S D+ C D++EC+ + CS +CTN GSY CSC +G+ L D H+ C+ + +
Sbjct: 3992 SPDNRKHCVDVDECQTDQHQCSHICTNLNGSYTCSCRQGFQLS-DRHSGVCRVEDDNIVV 4050
Query: 118 L-------------------IISNRHSILVADL--------------------------E 132
L +I N + D E
Sbjct: 4051 LFANGPELRAYDLRAREEMDVIDNEKRVQAIDFDPRSEFVFWIDSYDNTIKRSYMINAKE 4110
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD------SRLNRIEVCDENGTNRIVL 186
+ K AQD+ + LA DWI G++YW + RI + +G R ++
Sbjct: 4111 GQAKIGHAQDLNMKIDSKPTNLAVDWISGNLYWSEVDQTVVPSQGRIMMSKSDGRYRRMI 4170
Query: 187 AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 246
N+ QP +++DP G L W D G P+IE MDG R ++ +I P+ LT+D
Sbjct: 4171 VTTNLEQPTSVVVDPERGE--LVWADAGTQPKIEIAWMDGDRRKLLVIERIASPSALTID 4228
Query: 247 IATRR-VYFADSKLDFIDCKSLE-------IKTNVNYSTIFRK----------LYWI--- 285
A +Y++D KLD I+ +L ++ IFR LYW+
Sbjct: 4229 YAMEHTLYWSDVKLDTIEAINLSGTNRRIVLRIGAPRIGIFRHPVALDVFENNLYWVTKQ 4288
Query: 286 -------DEGGNGVPLKIGK 298
D+ G GVP I K
Sbjct: 4289 TGELVRQDKFGRGVPHTIIK 4308
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 78/126 (61%), Gaps = 6/126 (4%)
Query: 141 QDIVVSGL--DLVEGLAYDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRG 196
Q I+ G+ + + GLA DWI G++Y+ + N +EVC +G++R VL K PR
Sbjct: 2106 QQIIKQGIGSNGIRGLAVDWIAGNLYFANVFPHDNYVEVCRLDGSHRKVLVKTTTDSPRE 2165
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ ++P R+L+W D+G+ PRI + +DGSN S I+++ I P LT+D AT +Y+ D
Sbjct: 2166 LAVNPI--KRYLYWIDYGQYPRIGKAFLDGSNWSPIVTSGISTPRDLTIDFATHDIYWVD 2223
Query: 257 SKLDFI 262
SKLD I
Sbjct: 2224 SKLDTI 2229
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 171/433 (39%), Gaps = 106/433 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT---CPPGEI 60
+C+ CDG+ DC + +DE GC NT P P +C C ++
Sbjct: 3024 KCIRKQFRCDGQDDCGDYSDE-VGCP--------SRTKNTTCPNPKDFMCANGNCIDSQL 3074
Query: 61 LSNDSVTCQD---------MNECE--QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
+ N C D ++EC + C C +T S+ C CN GY L D C
Sbjct: 3075 VCNKVSDCADDSDEPLHCNVDECAHIEMNQCGHKCVDTPTSFYCECNPGYKLLADGKACD 3134
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I D + + + GG+ + R
Sbjct: 3135 DI------------------------------DECIETPQVCSQQCENTPGGYYCKCNER 3164
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
E DE+ R +DNI QP W+ +T+ + + +D SN
Sbjct: 3165 WYEREA-DEHTCKR----RDNI-QP------------WVVFTN---KYYVRNMSVDASNY 3203
Query: 230 STIISTKIYWPNGLTLDIATRRVYFAD--------------SKLDFIDCKSLEIKTNVNY 275
S ++ + L D A + +YF D + I SL ++ +
Sbjct: 3204 S-LMHQDLVNVVALDADYAQQMLYFCDVTAKTIYRAPVNGGEREPIIRHDSLGLE-GIAI 3261
Query: 276 STIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCT 335
I RKLYW+D + + A +DG+N L +G + + A+ + G T
Sbjct: 3262 DWIGRKLYWLDRHAKHLDV----AELDGTNRKTLQTG-IADPRAIAIHPG---------T 3307
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDFID 393
+L++T W I ++GMDGSN + I++ I WPN LT+D T R+++AD+ LD+I
Sbjct: 3308 GYLYFTSWHLQAYIGKMGMDGSNFTRILTWEDDIAWPNALTIDYFTDRIFWADAHLDYIA 3367
Query: 394 FCNYDGTGRQQVI 406
F + +G R+ V+
Sbjct: 3368 FADLEGHNRRIVL 3380
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 125/305 (40%), Gaps = 94/305 (30%)
Query: 80 CSQMC----TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK- 134
CSQ+C S+ C C G L DNHTC+ + +L+ + R I +++
Sbjct: 2320 CSQLCFAFPKENPTSFTCDCAVGK-LSSDNHTCENVEE---YLVFATRTEIRAINIDPHN 2375
Query: 135 ---------------GKDHRAQDIVV-------------------SGLDL---------V 151
G D QD + S DL
Sbjct: 2376 TNIPFTPIGNLTNVVGVDFDYQDKKLLFTQIRPWAKIAWTPSDRPSSADLHTLISKGINP 2435
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EG++YDW +YW DS N I D +G+N +++A+ + +PR +++DP G+ L++T
Sbjct: 2436 EGISYDWTQKKVYWTDSSNNSIYAMDIDGSNLVMIAR--VDRPRAIVVDPCNGS--LYFT 2491
Query: 212 DWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
DWG + +I + M GS + II + P+GL +D R
Sbjct: 2492 DWGRFGTSGKIFKATMAGSLKRAIIDKDLSQPSGLAIDYDDR------------------ 2533
Query: 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLY 328
LYW D V KI +++++G+N IL+S +Y A+ + +Y
Sbjct: 2534 ------------MLYWTD----AVREKIERSDLEGNNRKILISATIY-PFAITVFREHIY 2576
Query: 329 YSTLK 333
++ L+
Sbjct: 2577 WTDLQ 2581
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 71/127 (55%), Gaps = 4/127 (3%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDP 201
++ S + VEGLA DW ++Y++DSR + V N T R L K N+ +PR +++ P
Sbjct: 723 VLASQNEGVEGLAVDWAAKNLYYIDSRKGTLNVLSTRNVTYRRTLLK-NLKRPRAIVIHP 781
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
+ G ++F+++W I R DGSN + + WPNGL +D R+Y+ D+ LD
Sbjct: 782 NHG--YIFFSEWDRPANISRAHADGSNLVVFRNLTLGWPNGLAIDFNKDRLYWCDALLDH 839
Query: 262 IDCKSLE 268
+ +L+
Sbjct: 840 VQHSNLD 846
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 49/232 (21%)
Query: 196 GMMLDPSPGTRWLFW----TDWGENPRIERIGMDGSNRSTIISTK-----IYWPNGLTLD 246
G +D R ++W D EN I I G NR+ + + P+ + LD
Sbjct: 1746 GRFIDYDRSARKIYWLQGKDDDSENGTIYSISYRGENRTEFPNPSGNTGIVGSPSTMALD 1805
Query: 247 IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRK----------------------LYW 284
R ++ + I+ ++++ Y TI ++W
Sbjct: 1806 WLGRNMFIGNKFASNIE--AIKLDDKARYRTIVLANDGSRTSVSKPKAMCVDPIDGVVFW 1863
Query: 285 IDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTRWLFWTD 342
+DEGG GVP KIG+ NMDGSN IL+ L EAL +DL + LY+S+
Sbjct: 1864 VDEGGFGVPQKIGRVNMDGSNPLILIEKNLERPEALIIDLTSKTLYFSS----------- 1912
Query: 343 WGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
+NP I+ + DG N TI++T L + R+Y+ D + + I+
Sbjct: 1913 --QNPAFIKSMSTDGQNVRTILTTANNMALPKALAVHDSRLYYLDPQYEKIE 1962
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 45/201 (22%)
Query: 207 WLFWTDWGEN--PRIERIGMDGSNRSTIISTKI--YWPNGLTLDIATRRVYFADSKLDFI 262
W++W ++ I RI +G+ II I GL +D +YFA+
Sbjct: 2081 WIYWVEFNRGIWNGIFRIRPNGTELQQIIKQGIGSNGIRGLAVDWIAGNLYFAN------ 2134
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+ + NY + R +DGS+ +LV L +
Sbjct: 2135 ------VFPHDNYVEVCR--------------------LDGSHRKVLVKTTTDSPRELAV 2168
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
R+L+W D+G+ PRI + +DGSN S I+++ I P LT+D AT +
Sbjct: 2169 N---------PIKRYLYWIDYGQYPRIGKAFLDGSNWSPIVTSGISTPRDLTIDFATHDI 2219
Query: 383 YFADSKLDFIDFCNYDGTGRQ 403
Y+ DSKLD I +Y G R+
Sbjct: 2220 YWVDSKLDTIQKVSYTGGNRE 2240
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 86/213 (40%), Gaps = 44/213 (20%)
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
+ R + LD ++++++D ++ I R+ + + R +++++ GL +D A + +
Sbjct: 685 RARFVGLDYDAYDQYIYYSDVLQD-VIYRVHQNATGREIVLASQNEGVEGLAVDWAAKNL 743
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+ DS+ ++ S NV Y K N+ A ++
Sbjct: 744 YYIDSRKGTLNVLSTR---NVTYRRTLLK------------------NLKRPRAIVIHPN 782
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
Y +F+++W I R DGSN + + WPNG
Sbjct: 783 HGY----------------------IFFSEWDRPANISRAHADGSNLVVFRNLTLGWPNG 820
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
L +D R+Y+ D+ LD + N DGT + V
Sbjct: 821 LAIDFNKDRLYWCDALLDHVQHSNLDGTDVRTV 853
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 122/319 (38%), Gaps = 62/319 (19%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G C Q+C + G+ +C+C ++Y T F +++ L K
Sbjct: 2003 GDCDQLCLPASGGTRVCACG----MDYRKVTDTKCEPYKTFAVVTQLDVARGYSL----K 2054
Query: 137 DHRAQDIVVSGL-DLVEGLAYDWIGGHIYWLDSRL---NRIEVCDENGTNRIVLAKDNIT 192
D + I ++G+ + + + G IYW++ N I NGT + K I
Sbjct: 2055 DSKEAMIPIAGVGHHILHVDVHYAGNWIYWVEFNRGIWNGIFRIRPNGTELQQIIKQGIG 2114
Query: 193 QP--RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
RG+ +D G + F + + +E +DGS+R ++ T P L ++
Sbjct: 2115 SNGIRGLAVDWIAGNLY-FANVFPHDNYVEVCRLDGSHRKVLVKTTTDSPRELAVN---- 2169
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
I R LYWID G +IGKA +DGSN S +V
Sbjct: 2170 --------------------------PIKRYLYWIDYGQYP---RIGKAFLDGSNWSPIV 2200
Query: 311 SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 370
+ + L ++ T ++W D + I+++ G NR I + P
Sbjct: 2201 TSGISTPRDLTIDFA---------THDIYWVD-SKLDTIQKVSYTGGNREII---RRNLP 2247
Query: 371 NGLTLDIATRRVYFADSKL 389
N + + I VY+ D L
Sbjct: 2248 NPMGVAIFGGDVYWVDRNL 2266
>gi|347963623|ref|XP_310784.4| AGAP000331-PA [Anopheles gambiae str. PEST]
gi|333467112|gb|EAA06237.5| AGAP000331-PA [Anopheles gambiae str. PEST]
Length = 4655
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/300 (65%), Positives = 226/300 (75%), Gaps = 37/300 (12%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V +RCVNLT VCD DCPNGADEG GCDLA+C+H+ GLCSN C TPLGALC CPPGE
Sbjct: 1322 VTERCVNLTSVCDDVPDCPNGADEGLGCDLAQCQHQTGLCSNGCQKTPLGALCICPPGEE 1381
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
L+ D+ TC+D+NEC+ PG CSQ CTNTKGSY CSC +GYVLE + HTCKA+NH AAFLII
Sbjct: 1382 LAPDNFTCKDLNECDPPGLCSQRCTNTKGSYFCSCVDGYVLEPNKHTCKAVNHPAAFLII 1441
Query: 121 SNRHSILVADLEEKG-------------------------------------KDHRAQDI 143
SNRHSILVADL+E+G + Q+I
Sbjct: 1442 SNRHSILVADLKEQGLERVPIIVENVVATASNMHTGTIFWSDMKLKKISRLDRGMEPQEI 1501
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ +GLDLVEGLAYDWIG ++YWLDS+LN IEV ENG+NR+VL ++NITQPRGM LDPSP
Sbjct: 1502 ISTGLDLVEGLAYDWIGQNLYWLDSKLNTIEVAHENGSNRLVLVRENITQPRGMCLDPSP 1561
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+WLFWTDWGENPRIERIGMDG+ R TI+STKIYWPNGLTLD+AT+RVYFADSKLDFID
Sbjct: 1562 TAKWLFWTDWGENPRIERIGMDGTMRETIVSTKIYWPNGLTLDVATQRVYFADSKLDFID 1621
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 184/434 (42%), Gaps = 100/434 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C++ VC+ DC + +DE C++ EC K + C + C T C C G L
Sbjct: 3094 QCIDYHLVCNKVPDCTDESDEPLHCNVDECAKVEIHRCGHKCVDTLTSYYCDCNQGYKLL 3153
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYV-LEYDNHTCKAINHSAAFLII 120
D C D++EC E PG CSQ C+NT G Y C C+E Y + D HTCK + + +LI
Sbjct: 3154 EDGKACADIDECIETPGVCSQHCSNTPGGYYCKCDERYYERQNDEHTCKRKDDTKPWLIF 3213
Query: 121 SNR--------------------------------HSILVAD-------------LEEKG 135
SN+ H + D L E G
Sbjct: 3214 SNKYYVRNMSTDGHQYNLIHQDLMNVVAIDFDMQQHEMYFCDVTAKTIFKSSFGSLVEDG 3273
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
++ +EG+A DW+G +YWLD ++V + +GT R L + + PR
Sbjct: 3274 VRIEKTPVIKHDSHGLEGIAIDWVGRKLYWLDRHSKNLDVAELDGTRRKTL-RSGVVDPR 3332
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVY 253
+++ PG +L++T W I ++GMDGSN + I++ I WPN LT+D T R+Y
Sbjct: 3333 AIVV--HPGIGYLYFTSWHLQAYIAKMGMDGSNFTRILTWEDDIAWPNALTIDYFTDRIY 3390
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG- 312
+AD+ LD+ I A+++G + +++SG
Sbjct: 3391 WADAHLDY----------------------------------IAFADLEGRHRHVVLSGA 3416
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
++ AL + + LY WTDW + G+N T++ + P
Sbjct: 3417 RVPHVFALSIFDDSLY-----------WTDWNLKAILRANKFTGANY-TVVRNTTHRPYD 3464
Query: 373 LTLDIATRRVYFAD 386
+ + R++ F +
Sbjct: 3465 VHISHPLRQIPFPN 3478
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 166/370 (44%), Gaps = 64/370 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C+ +K+CDGK DC +G DE C C G C + C P+ G +C CP G LS
Sbjct: 266 KCIVKSKLCDGKRDCDDGTDEETACSTTSCP-ALG-CEHKCGPSLTGGVCYCPAGRTLSP 323
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC D++EC G+C Q+CTNT GS+ C+C GY L + C A S+ L +
Sbjct: 324 DNRTCADLDECTVWGHCDQLCTNTDGSFSCACATGYTL-MEKTRCVAPTASSLELFFAYD 382
Query: 124 HSILVADLEEKGKDHR--AQDIVVSGLD----------------------LVEG------ 153
+IL + G+D R A SGL LV+G
Sbjct: 383 RAIL--RMSAHGQDSRIIANATGASGLSYHYAKNLLYWSDIKTRKVQSQVLVDGGFGGHD 440
Query: 154 -----------LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+A DW+G +Y D +++V + +G V+ N+T P + LDP+
Sbjct: 441 FTLPGTWAPVAIAIDWVGDKLYVADLVGQKVDVFELDGRWHAVVLGSNLTSPADLALDPT 500
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G ++ + + R MDG++ +I+S Y +G+ +D+ RRV++ DS LD+I
Sbjct: 501 AGLMFV-----ADGSHVLRAHMDGTHAKSIVSEAAYKASGVAVDVIARRVFWCDSLLDYI 555
Query: 263 DCKSLE------------IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
+ S E + + + +++W D G+ + + + S SI
Sbjct: 556 ESVSYEGERRVMILRGQQVPSPSRLALFENRVFWSDATKQGI-MSVDRFEGSSSIQSIFK 614
Query: 311 SGQLYEALAL 320
+ + E AL
Sbjct: 615 AKDIREPRAL 624
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 165/399 (41%), Gaps = 78/399 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEIL- 61
+C++ +VCD DC +G+DE A C G C + C G +C C G I+
Sbjct: 3967 KCIDRAQVCDYADDCGDGSDELGCHRTASCSALNKGGCEHHCVNLTDGYICACYAGFIID 4026
Query: 62 SNDSVTCQDMNECEQPGY-CSQMCTNTKGSYICSCNEGYVL-EYDNHTCKAIN------- 112
+++ C D++EC + CS +CTN G+Y C C EG+ L + + CKA+
Sbjct: 4027 ASNKKRCTDIDECATGTHGCSHLCTNLNGTYECGCREGFRLSDRVSGVCKALKGEPLLVL 4086
Query: 113 ------------HSAAFLIISN--------------------------RHSILVADLEEK 134
+ F +I+ + S +V +
Sbjct: 4087 SGGPEIRAYEPAQNRQFDVIAGEKRIEALDYNPESQMIFWTDSYDKTIKRSYMVNAMNGD 4146
Query: 135 GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN------RIEVCDENGTNRIVLAK 188
K AQD+ + G LA DW+ ++YW ++ RI V +G R L +
Sbjct: 4147 AKVGYAQDLNMKGGTKPTALAVDWVADNLYWAETDRTGSKPRGRIMVAKTDGRYRRALVQ 4206
Query: 189 DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248
+ P + +DP G +FW D G P+IE MDGS R II+ I P GLT+D +
Sbjct: 4207 AGLEVPTAIAVDPQLGR--MFWADAGSAPKIEVSWMDGSKRRPIITEAIRHPAGLTVDYS 4264
Query: 249 T-RRVYFADSKLDFIDC------------KSLEIKTNVNYSTIFRKLYWI--DEGGNGVP 293
VY+ D+KL+ I+ K +K V+ LYW+ D G
Sbjct: 4265 QDHAVYWVDTKLNTIEVMKPDGTMRRTVLKGDLLKHPVSLDVFESSLYWVTRDTG----- 4319
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
++ + + G + V L ++ + + + Y +TL
Sbjct: 4320 -ELLRQDKFGRGVQVTVQRNLANPSSIKVYHELRYNTTL 4357
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 128/280 (45%), Gaps = 38/280 (13%)
Query: 141 QDIVVSGL--DLVEGLAYDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRG 196
Q IV G+ + + G+A DW+ G++Y+ + N +EV +GT+R VL K PR
Sbjct: 2135 QHIVKDGIGSNGIRGIAIDWVAGNLYFTNVFPHENYVEVAWLDGTHRKVLVKTTNDAPRE 2194
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ ++P R L+W D+G+ PRI + +DGSN + ++++ I P LT+D+ T VY+ D
Sbjct: 2195 LAVNPI--KRLLYWIDYGQYPRIGKCFLDGSNWTPVVTSGISNPRDLTVDMLTHDVYWVD 2252
Query: 257 SKLDFIDCKSLE------IKTNV----NYSTIFRKLYWIDEG------GNGVPLKIGKAN 300
SKLD I S I+ N+ + +YW+D + P +
Sbjct: 2253 SKLDMIQKVSYSGGHRQVIRRNLANPMALAVFLTDVYWVDRNLASVFRASKFPGNSTRPE 2312
Query: 301 MDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFW--TDWGENPR------IE 350
+N L +Y+ + +D N L C + F D+ + P +
Sbjct: 2313 RLRTNLPKLRDITIYDINSQPMDDANPCLRLGNGGCDQLCFALPPDYSQKPSFRCDCAVG 2372
Query: 351 RIGMDG-----SNRSTIISTKIYWPNGLTLDIATRRVYFA 385
R+G DG ++ I +T+ + LD A+ V FA
Sbjct: 2373 RLGADGRHCELTDEYIIFATRTEI-RAIDLDPASTNVPFA 2411
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 87/185 (47%), Gaps = 42/185 (22%)
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EG+AYDW IYW DS N I + +GT +++A+ + +PR ++LDP GT L++T
Sbjct: 2466 EGIAYDWTQRKIYWTDSSNNSIYAMNTDGTELVMIAR--VERPRAIVLDPCNGT--LYFT 2521
Query: 212 DWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
DWG + +I R M GS + II + P+GL +D
Sbjct: 2522 DWGRFGTSGKIFRTTMAGSLKRAIIDRDLSQPSGLAIDYDD------------------- 2562
Query: 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLY 328
R LYW D V KI ++ +DG N +L+S +Y A+ + +Y
Sbjct: 2563 -----------RMLYWTD----AVREKIERSQLDGRNREVLISATIY-PFAITVFRNYIY 2606
Query: 329 YSTLK 333
++ L+
Sbjct: 2607 WTDLQ 2611
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 50/239 (20%)
Query: 78 GYCSQMC--TNTKGS-----YICSCNEGYVLEYDNHTCKAINH----------------- 113
G CSQMC T +G+ Y C+C+ G+ L D C +
Sbjct: 644 GGCSQMCVVTAVQGAPSGLGYRCACHTGWQLSKDLMNCHLVRQFLMYSQQRFIKGKVLDP 703
Query: 114 ------SAAFLIISNRHSILVADLEEKGKD--------------HR---AQDIVVSGLDL 150
A ++S R + D + + HR ++IV++ +
Sbjct: 704 VIEGFSDAILPVVSRRARFVGLDFDAVDEHIYYSDVLQDVIYRVHRNGTGREIVLASQNE 763
Query: 151 -VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
VEGLA DW+ ++Y++DSR + V T+ N+ +PR +++ P+ G +++
Sbjct: 764 GVEGLAVDWVSKNLYYIDSRKGTLNVLSTRNTSYRRTLLKNLKRPRAIVVHPNRG--YIY 821
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
+++W I R DGS + + WPNGL++D RVY+ D+ LD + +L+
Sbjct: 822 FSEWDRPANISRANADGSGLIVFRNLTLGWPNGLSIDFREDRVYWCDALLDHVQHANLD 880
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 16/131 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRW 337
+ RKLYW+D + + A +DG+ L SG + + A+ + G+ Y
Sbjct: 3297 VGRKLYWLDRHSKNLDV----AELDGTRRKTLRSG-VVDPRAIVVHPGIGY--------- 3342
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
L++T W I ++GMDGSN + I++ I WPN LT+D T R+Y+AD+ LD+I F
Sbjct: 3343 LYFTSWHLQAYIAKMGMDGSNFTRILTWEDDIAWPNALTIDYFTDRIYWADAHLDYIAFA 3402
Query: 396 NYDGTGRQQVI 406
+ +G R V+
Sbjct: 3403 DLEGRHRHVVL 3413
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 133/346 (38%), Gaps = 80/346 (23%)
Query: 80 CSQMC---TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
C +C + Y C C GY L + + N AF+++ + I+ D+ G
Sbjct: 1707 CQHVCLLSPSEPAGYACKCRPGYRLLPEGRCTEEEN---AFIMLLKGNQIV--DVPFNGG 1761
Query: 137 DHRAQDIV-VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D R+ ++ V G++ L YD G +YW+ R E DEN T + A R
Sbjct: 1762 DARSSGLMPVVGIEGGISLDYDRKGEMVYWVQGR---DESDDENCT---IYATPYGGGNR 1815
Query: 196 GMMLDPSPGTRWLFWT---DW-GEN--------PRIERIGMDGSNRSTII-------STK 236
L P G +T DW G N IE I +DG R + T
Sbjct: 1816 TEFLGPDTGLVGAAYTIAFDWIGRNLYVGNRLASNIEAISVDGKVRYRTVVLANDGNRTS 1875
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI 296
+ P L LD A R L+WIDEGG GV K+
Sbjct: 1876 VAKPKQLALDPADGR------------------------------LFWIDEGGFGVLTKV 1905
Query: 297 GKANMDGSNASIL-VSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A MDGS+ +L + Q E++ +D E +YYST P + I D
Sbjct: 1906 ASAGMDGSDPRVLDDTVQFPESITVDAEKRRVYYSTRL------------PPAVLSIEYD 1953
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFAD---SKLDFIDFCNYD 398
G+ + TI+S + L + R+YF D KL +D N D
Sbjct: 1954 GTGQRTILSEENAISKPRALAVLESRLYFLDPTYEKLARVDLPNGD 1999
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
R L+W D+G+ PRI + +DGSN + ++++ I P LT+D+ T VY+ DSKLD I
Sbjct: 2202 RLLYWIDYGQYPRIGKCFLDGSNWTPVVTSGISNPRDLTVDMLTHDVYWVDSKLDMIQKV 2261
Query: 396 NYDGTGRQQVILIDL 410
+Y G G +QVI +L
Sbjct: 2262 SYSG-GHRQVIRRNL 2275
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+ Y RK+YW D N I N DG+ ++ + A+ LD NG LY++
Sbjct: 2468 IAYDWTQRKIYWTDSSNN----SIYAMNTDGTELVMIARVERPRAIVLDPCNGTLYFTD- 2522
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
W +G + +I R M GS + II + P+GL +D R +Y+ D+ + I
Sbjct: 2523 -------WGRFGTSGKIFRTTMAGSLKRAIIDRDLSQPSGLAIDYDDRMLYWTDAVREKI 2575
Query: 393 DFCNYDGTGRQQVI 406
+ DG R+ +I
Sbjct: 2576 ERSQLDGRNREVLI 2589
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 125/328 (38%), Gaps = 73/328 (22%)
Query: 78 GYCSQMC------TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADL 131
G C Q+C + K S+ C C G L D C+ + ++I + R I DL
Sbjct: 2346 GGCDQLCFALPPDYSQKPSFRCDCAVGR-LGADGRHCELTDE---YIIFATRTEIRAIDL 2401
Query: 132 EEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-NRIE--VCDENGTNRIVLAK 188
+ + V+ L V GL +D+ +++ R ++I D+ I
Sbjct: 2402 DPASTN--VPFAPVANLTNVVGLDFDYADNKLFFTQIRPWSKIAWLRGDKPDAAAITPVM 2459
Query: 189 DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248
P G+ D + R ++WTD N I + DG+ ++ ++ P + LD
Sbjct: 2460 TRGINPEGIAYDWT--QRKIYWTDSSNN-SIYAMNTDGT--ELVMIARVERPRAIVLDPC 2514
Query: 249 TRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
+YF D W G G KI + M GS
Sbjct: 2515 NGTLYFTD---------------------------W---GRFGTSGKIFRTTMAGSLKRA 2544
Query: 309 LVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 366
++ L + LA+D ++ MLY WTD +IER +DG NR +IS
Sbjct: 2545 IIDRDLSQPSGLAIDYDDRMLY-----------WTD-AVREKIERSQLDGRNREVLISAT 2592
Query: 367 IYWPNGLTL--------DIATRRVYFAD 386
IY P +T+ D+ R VY A+
Sbjct: 2593 IY-PFAITVFRNYIYWTDLQLRGVYRAE 2619
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 26/147 (17%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA--LALDLENGMLYYSTLKCTRWL 338
KLY D G K+ +DG ++++ L LALD G+++ +
Sbjct: 460 KLYVADLVGQ----KVDVFELDGRWHAVVLGSNLTSPADLALDPTAGLMFVA-------- 507
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
+ + R MDG++ +I+S Y +G+ +D+ RRV++ DS LD+I+ +Y+
Sbjct: 508 ------DGSHVLRAHMDGTHAKSIVSEAAYKASGVAVDVIARRVFWCDSLLDYIESVSYE 561
Query: 399 GTGR------QQVILIDLMVEFTNDLM 419
G R QQV + F N +
Sbjct: 562 GERRVMILRGQQVPSPSRLALFENRVF 588
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 15/91 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALC---------- 53
RC+ CD + DC +G+DEGP C C + C T H P +C
Sbjct: 1115 RCIPNIWKCDSENDCGDGSDEGPFCAEKTCAYFQFTCPRTGHCIPQSWVCDGDDDCFDKQ 1174
Query: 54 ---TCPPGEILSNDSVTCQDMNEC-EQPGYC 80
CPP L+N C D+ +C E+P C
Sbjct: 1175 DEKDCPPITCLAN-QFKCADLRQCVEEPYKC 1204
>gi|157124457|ref|XP_001660469.1| low-density lipoprotein receptor (ldl) [Aedes aegypti]
gi|108873980|gb|EAT38205.1| AAEL009869-PA [Aedes aegypti]
Length = 4525
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/377 (55%), Positives = 253/377 (67%), Gaps = 54/377 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
+ +RCVNLT VCD DCPNGADEG GCDLA+C H+ GLCSN C TPLGALC CPPGE
Sbjct: 1212 ITERCVNLTSVCDDVEDCPNGADEGLGCDLAQCTHQTGLCSNGCQKTPLGALCICPPGEE 1271
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
L+ D+ TC+D+NEC+ PG CSQ+CTNTKGSY CSC +GY+LE + HTCKA+NHS+AFLII
Sbjct: 1272 LAPDNFTCKDLNECDPPGLCSQICTNTKGSYFCSCTDGYILEPNKHTCKAVNHSSAFLII 1331
Query: 121 SNRHSILVADLEEKG-------------------------------------KDHRAQDI 143
SNRHSILVADL E+G + ++I
Sbjct: 1332 SNRHSILVADLNEQGLERVPIIVENVVATASNMHTGTIFWSDMKLKKISRLDRGQEPREI 1391
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ +GLDLVEGLAYDWIG ++YWLDS+LN IEVC ENG+NR+VL ++NITQPRGM LDPSP
Sbjct: 1392 ISTGLDLVEGLAYDWIGQNLYWLDSKLNTIEVCSENGSNRLVLVRENITQPRGMCLDPSP 1451
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
++LFWTDWGENPRIERIGMDG+ R TII+TKIYWPNGLTLDI+T+RVYFADSKLDFID
Sbjct: 1452 NAKFLFWTDWGENPRIERIGMDGTMRETIINTKIYWPNGLTLDISTQRVYFADSKLDFID 1511
Query: 264 -------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
S + + S LYW D N V + GSN ++ V
Sbjct: 1512 FCYYNGTGRQQVLAASHYLLHAHSLSLFEDTLYWTDRQLNRV---LSANKYRGSNQTV-V 1567
Query: 311 SGQLYEALALDLENGML 327
S + + L++ + + L
Sbjct: 1568 SHLISQPLSIHVHHPSL 1584
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 190/431 (44%), Gaps = 99/431 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C++ VC+ DC + +DE C++ EC K + C + C TP G C C G L
Sbjct: 2983 QCIDSHLVCNKVPDCSDESDEPLHCNVDECAKVEIHRCGHKCVDTPTGYYCDCNSGYKLL 3042
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYV-LEYDNHTCKAINHSAAFLII 120
D C D++EC E PG CSQ C+NT GSY C C++ Y + D HTCK + + +LI
Sbjct: 3043 EDGKACADIDECIETPGVCSQHCSNTPGSYYCKCDDRYYERQNDEHTCKRKDATKPWLIF 3102
Query: 121 SNRH--------------------SILVADLEEKGK-----DHRAQDIVVSGLDLV---- 151
SN++ +++ D + K + D A+ I S +
Sbjct: 3103 SNKYYVRNMSVDGHQYNLIHQDLMNVVAIDFDMKEEEMYFCDVTAKTIFKSKFGSIQDDV 3162
Query: 152 ---------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
EG+A DW+G +YWLD ++V + +GT R L K + PR
Sbjct: 3163 KIEKVPVIKHDSHGLEGIAIDWVGRKLYWLDRHSKNLDVSELDGTKRKTL-KSGVVDPRA 3221
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYF 254
+ + PG +L++T W I ++GMDGSN + I++ I WPN LT+D T R+Y+
Sbjct: 3222 IAV--HPGIGYLYFTSWHLQAYIAKMGMDGSNFTRILTWEQDIAWPNALTIDYFTDRIYW 3279
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG-Q 313
AD+ LD+ I ++++G + +++SG +
Sbjct: 3280 ADAHLDY----------------------------------IAFSDLEGRHRHVVLSGSK 3305
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
+ AL + + MLY WTDW I G N TII + P +
Sbjct: 3306 VPHVFALSIFDDMLY-----------WTDWNLKAIIRANKFTGEN-FTIIRNTTHRPYDV 3353
Query: 374 TLDIATRRVYF 384
+ R++ +
Sbjct: 3354 HISHPLRQLPY 3364
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 167/367 (45%), Gaps = 58/367 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C+ TK+CDGK DC +G DE C A C G C C P+ G +C C PG LS+
Sbjct: 169 KCIAKTKLCDGKRDCEDGTDEETACSTASCP-ALG-CEYKCGPSLTGGVCYCQPGRTLSS 226
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVL------------------EYDN 105
D+ TC D++EC + G+C Q+CTNT GSY C+C GY L YD
Sbjct: 227 DNRTCSDLDECNEWGHCDQLCTNTDGSYFCACASGYTLMDKSRCVAPTASNLELIFAYDR 286
Query: 106 HTCKAINHSAAFLIISN---------RHS---ILVADLEEKGKDHR--------AQDIVV 145
+ +H F I+N HS + +D++ + + D +
Sbjct: 287 AIVRMSSHGQDFRTIANATGASGLAYHHSKNLLFWSDIKTRKVQSQVLENGGYGGHDFSL 346
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
G +A DWIG +Y D +++V + +G R V+ N+T P + LDP+ G
Sbjct: 347 PGTWAPVAIAIDWIGDKLYVADLVGQKVDVFELDGRWRAVVLGSNLTSPADLALDPTSGL 406
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC- 264
++ + + R MDG++ +I+S Y +G+ +D+ +RV++ DS LD+I+
Sbjct: 407 MFV-----ADGSHVLRAHMDGTHAKSIVSEAAYKASGVAVDVIAKRVFWCDSLLDYIESV 461
Query: 265 -----------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+ ++ + + +++W D G+ + + K S SI +
Sbjct: 462 NYDGQYRVMILRGQQVPSPSRLALFENRVFWTDATKQGI-MSVDKFEGSSSIQSIFKAKD 520
Query: 314 LYEALAL 320
+ E A+
Sbjct: 521 IREPKAI 527
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 166/400 (41%), Gaps = 79/400 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHP-TPLGALCTCPPGEIL 61
+C++ ++CD DC + +DE + C G C + CH T G +C C PG I+
Sbjct: 3855 KCIDRAQICDYADDCGDSSDELGCHHTSTCSALTKGGCEHHCHNLTDGGYICACYPGFII 3914
Query: 62 -SNDSVTCQDMNECEQPGY-CSQMCTNTKGSYICSCNEGYVL-EYDNHTCKAINHSAAF- 117
+ + C D++EC + CS +CTN G+Y CSC +G+ L + + CKA+
Sbjct: 3915 DAENKKHCLDIDECATGTHKCSHICTNLNGTYACSCRDGFRLADAVSGVCKALKDDVTVV 3974
Query: 118 -----------LIISNRHSILVADLEEKGKDHR--------------------------- 139
L I+++ ++ + + D+
Sbjct: 3975 FSSGPEIRAYDLKINDQFDVIAGEKRIEALDYSPSTQMIFWADSYDKTIKRSYMVNARNG 4034
Query: 140 ------AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN------RIEVCDENGTNRIVLA 187
AQD+ + G LA DWI ++YW ++ RI V +G R L
Sbjct: 4035 EVKIGFAQDLNMKGNSKPTALAVDWIADNLYWAETDRTGSKPRGRIMVAKTDGRYRRALV 4094
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P + +DP G +FW D G P+IE MDGS R +I+ I P GLT+D
Sbjct: 4095 NAGLEVPTSIAVDPQLGR--MFWADAGSAPKIEVSWMDGSKRRPLITEAIRHPAGLTIDY 4152
Query: 248 AT-RRVYFADSKLDFIDC------------KSLEIKTNVNYSTIFRKLYWI--DEGGNGV 292
A VY+ D+KL+ I+ K +K V+ LYWI D G
Sbjct: 4153 AQDHMVYWVDTKLNTIEVMKPDGSMRRSILKGEMLKHPVSLDVFESFLYWITRDTG---- 4208
Query: 293 PLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
++ + + G + V L +L + + + Y ++L
Sbjct: 4209 --ELLRQDKFGRGVQVAVQRSLANPSSLKVYHDLRYNTSL 4246
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 145/346 (41%), Gaps = 81/346 (23%)
Query: 80 CSQMC---TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
C +C + K Y C C GY L D + + A+L++ + I+ D+ G
Sbjct: 1597 CQHICLLSPSEKSGYSCKCKPGYKLMSDG---RCVEEENAYLMVLRNNQIV--DVPFNGG 1651
Query: 137 DHRAQDIV-VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD------ENGTNRIVLAKD 189
D RA ++ V G++ + YD G ++W+ + E C G L D
Sbjct: 1652 DVRAGSMIPVVGIESGISVDYDRKGETLFWVQGKEEDDENCTIYITPYGGGNKTRFLGAD 1711
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
N G++ G + DW I ++ N L +I
Sbjct: 1712 N-----GLV-----GAAYTIAFDW-------------------IGRNLFIGNRLASNIEA 1742
Query: 250 RRVYFADSKLDFIDCKSLEIKTNVNYSTIFR-----------KLYWIDEGGNGVPLKIGK 298
+V D K+ + +++ + + N +++ + KL+WIDEGG GVP K+
Sbjct: 1743 IKV---DGKVKY---RTVVLVNDGNRTSVSKPKQIALDPTNGKLFWIDEGGYGVPTKVAM 1796
Query: 299 ANMDGSNASILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGS 357
ANMDGSN IL Q EA+ LD+E M+YYS+ P + I DG+
Sbjct: 1797 ANMDGSNPMILEETVQFPEAITLDIEKRMVYYSSQ------------HPPEVTSIDYDGN 1844
Query: 358 NRSTIISTK--IYWPNGLTLDIATRRVYFAD---SKLDFIDFCNYD 398
N+ TI++ + I P GL + R+YF D K+ +D N D
Sbjct: 1845 NKKTILTEQNGIAKPRGLG--VLESRLYFMDPVYEKIVRVDLPNGD 1888
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 34/178 (19%)
Query: 147 GLDLVEGLAYDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
G + + G+A DW+ G++Y+ + N +EV +GT+R ++ K PR + ++P
Sbjct: 2032 GSNGIRGIAIDWVAGNMYFTNVFPHENYVEVSWLDGTHRKIIVKTTNDAPRELAVNPI-- 2089
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
R L+W D+G+ PRI + +DGSN + ++++ I P LT+D+ T VY+ DSKLD I
Sbjct: 2090 KRLLYWIDYGQYPRIGKCYLDGSNWTPVVTSGISNPRDLTVDMLTHDVYWVDSKLDMIQ- 2148
Query: 265 KSLEIKTNVNYSTIFRK--------------LYWIDE------------GGNGVPLKI 296
+I N + R+ +YW+D G N +P K+
Sbjct: 2149 ---KISYNGGNRQVIRRNLANPMAIAVHLTDIYWVDRNLLTVFKATKFPGNNTLPEKV 2203
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 88/163 (53%), Gaps = 18/163 (11%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ G++ EG+AYDW IYW DS N I + +G++ +++ + + +PR ++LDP
Sbjct: 2347 VITRGIN-PEGIAYDWTQKKIYWTDSSNNSIYAMNLDGSDLVMITR--VERPRAIVLDPC 2403
Query: 203 PGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--- 256
GT L++TDWG + +I R M GS + II + P+GL +D R +Y+ D
Sbjct: 2404 NGT--LYYTDWGRFGTSGKIFRTTMAGSLKRAIIDKDLSQPSGLAIDYDERMLYWTDAVR 2461
Query: 257 -----SKLDFIDCKSLEIKTNVNYS-TIFRK-LYWIDEGGNGV 292
S+LD D + L T ++ T+FR +YW D GV
Sbjct: 2462 EKIERSRLDGKDREVLVSATIYPFAITVFRNYIYWTDLQLRGV 2504
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 107/240 (44%), Gaps = 52/240 (21%)
Query: 78 GYCSQMC--TNTKGS-----YICSCNEGYVLEYDNHTCKAINH----------------- 113
G CSQMC T +G+ Y C+C G+ L D C+ +
Sbjct: 547 GGCSQMCVVTAVQGAPSGLGYRCACTTGWQLSKDLMNCELVRQFLMYSQQRFIKGKVLDP 606
Query: 114 ------SAAFLIISNRHSILVADLEEKGKD--------------HR---AQDIVVSGLDL 150
A ++S R + D + + HR ++IV++ +
Sbjct: 607 VIEGFSDAILPVVSRRARFVGLDFDAVDEHIYYSDVLQDVIYRVHRNGTGREIVLASQNE 666
Query: 151 -VEGLAYDWIGGHIYWLDSRLNRIEVCDENG-TNRIVLAKDNITQPRGMMLDPSPGTRWL 208
VEGLA DW+ ++Y++DSR + V T+R L K N+ +PR +++ P+ G ++
Sbjct: 667 GVEGLAVDWVSKNLYYIDSRKGTLNVLSTRTVTHRRTLLK-NLKRPRAIVVHPNKG--YI 723
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
++++W I R DG+ + + WPNGL++D RVY+ D+ LD + +L+
Sbjct: 724 YFSEWDRPANISRANSDGTGLMVFKNVTLGWPNGLSIDFKEDRVYWCDALLDHVQHSNLD 783
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 28/164 (17%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRW 337
+ RKLYW+D + + + +DG+ L SG + + A+ + G+ Y
Sbjct: 3185 VGRKLYWLDRHSKNLDV----SELDGTKRKTLKSG-VVDPRAIAVHPGIGY--------- 3230
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
L++T W I ++GMDGSN + I++ I WPN LT+D T R+Y+AD+ LD+I F
Sbjct: 3231 LYFTSWHLQAYIAKMGMDGSNFTRILTWEQDIAWPNALTIDYFTDRIYWADAHLDYIAFS 3290
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYS 439
+ +G R V L G AL + + MLY++
Sbjct: 3291 DLEGRHRHVV------------LSGSKVPHVFALSIFDDMLYWT 3322
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
R L+W D+G+ PRI + +DGSN + ++++ I P LT+D+ T VY+ DSKLD I
Sbjct: 2091 RLLYWIDYGQYPRIGKCYLDGSNWTPVVTSGISNPRDLTVDMLTHDVYWVDSKLDMIQKI 2150
Query: 396 NYDGTGRQQVILIDL 410
+Y+G G +QVI +L
Sbjct: 2151 SYNG-GNRQVIRRNL 2164
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 28/181 (15%)
Query: 242 GLTLDIATRRVYF---------ADSKLDFIDCKSLE--IKTNVN-----YSTIFRKLYWI 285
GL D A +++F A +K D D S++ I +N Y +K+YW
Sbjct: 2310 GLDFDYADNKLFFTQIRPWAKIAYTKGDKPDATSIKPVITRGINPEGIAYDWTQKKIYWT 2369
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
D N I N+DGS+ ++ + A+ LD NG LYY+ W +G
Sbjct: 2370 DSSNNS----IYAMNLDGSDLVMITRVERPRAIVLDPCNGTLYYTD--------WGRFGT 2417
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+ +I R M GS + II + P+GL +D R +Y+ D+ + I+ DG R+ +
Sbjct: 2418 SGKIFRTTMAGSLKRAIIDKDLSQPSGLAIDYDERMLYWTDAVREKIERSRLDGKDREVL 2477
Query: 406 I 406
+
Sbjct: 2478 V 2478
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 26/150 (17%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA--LALDLENGMLYYSTLKCT 335
I KLY D G K+ +DG ++++ L LALD +G+++ +
Sbjct: 360 IGDKLYVADLVGQ----KVDVFELDGRWRAVVLGSNLTSPADLALDPTSGLMFVA----- 410
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ + R MDG++ +I+S Y +G+ +D+ +RV++ DS LD+I+
Sbjct: 411 ---------DGSHVLRAHMDGTHAKSIVSEAAYKASGVAVDVIAKRVFWCDSLLDYIESV 461
Query: 396 NYDGTGR------QQVILIDLMVEFTNDLM 419
NYDG R QQV + F N +
Sbjct: 462 NYDGQYRVMILRGQQVPSPSRLALFENRVF 491
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 126/331 (38%), Gaps = 79/331 (23%)
Query: 78 GYCSQMC------TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADL 131
G C Q+C N K ++ C C+ G L D C+ + +++ S R I +L
Sbjct: 2235 GGCDQLCFSFPPEYNQKPNFKCDCSVGR-LSTDGRRCELADE---YVVFSTRTEIRAIEL 2290
Query: 132 EEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIY------WLDSRLNRIEVCDENGTNRIV 185
+ +V L V GL +D+ ++ W + + D ++
Sbjct: 2291 NPASTNVPFAPVV--NLTNVVGLDFDYADNKLFFTQIRPWAKIAYTKGDKPDATSIKPVI 2348
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
N P G+ D + + ++WTD N I + +DGS+ ++ T++ P + L
Sbjct: 2349 TRGIN---PEGIAYDWT--QKKIYWTDSSNN-SIYAMNLDGSD--LVMITRVERPRAIVL 2400
Query: 246 DIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305
D +Y+ D W G G KI + M GS
Sbjct: 2401 DPCNGTLYYTD---------------------------W---GRFGTSGKIFRTTMAGSL 2430
Query: 306 ASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
++ L + LA+D + MLY WTD +IER +DG +R ++
Sbjct: 2431 KRAIIDKDLSQPSGLAIDYDERMLY-----------WTD-AVREKIERSRLDGKDREVLV 2478
Query: 364 STKIYWPNGLTL--------DIATRRVYFAD 386
S IY P +T+ D+ R VY A+
Sbjct: 2479 SATIY-PFAITVFRNYIYWTDLQLRGVYRAE 2508
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 307 SILVSG---QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
SILV+ Q E + + +EN + S + T +FW+D + +I R+ G II
Sbjct: 1336 SILVADLNEQGLERVPIIVENVVATASNMH-TGTIFWSDM-KLKKISRLDR-GQEPREII 1392
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
ST + GL D + +Y+ DSKL+ I+ C+ +G+ R
Sbjct: 1393 STGLDLVEGLAYDWIGQNLYWLDSKLNTIEVCSENGSNR 1431
>gi|270015974|gb|EFA12422.1| hypothetical protein TcasGA2_TC004414 [Tribolium castaneum]
Length = 2145
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/377 (55%), Positives = 251/377 (66%), Gaps = 54/377 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V++RCVNLT VCDGK CPNGADEGP CD EC+H+ GLCSN C TP G LC CP GE
Sbjct: 1277 VSERCVNLTNVCDGKPHCPNGADEGPDCDFKECQHQGGLCSNGCKQTPNGPLCLCPSGET 1336
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
L +D C+D+NECE PG CSQ CTNTKGSY CSC GY+LE + H+CKA NHS+AFLII
Sbjct: 1337 LKDDGFACEDLNECEPPGICSQTCTNTKGSYFCSCVPGYLLEPNKHSCKAYNHSSAFLII 1396
Query: 121 SNRHSILVADLEEKGKDH-------------------------------------RAQDI 143
SNRHSILVADL+++G + ++
Sbjct: 1397 SNRHSILVADLKDQGLERVPIIVENVVATASNMHTGTIFWSDMKLKKISRLDRGGEPVEV 1456
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ +GLDLVEGLAYDWIGG+IYWLDS+LN IEV ENG+NRIVL K+NITQPRGM LDPSP
Sbjct: 1457 ISNGLDLVEGLAYDWIGGNIYWLDSKLNTIEVAKENGSNRIVLVKENITQPRGMCLDPSP 1516
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
GTRWLFWTDWGENPRIERIGMDG+ RSTII+TKIYWPNGLTLD AT+RVYFADSKLDFID
Sbjct: 1517 GTRWLFWTDWGENPRIERIGMDGTKRSTIINTKIYWPNGLTLDTATQRVYFADSKLDFID 1576
Query: 264 ------CKSLEIKTNVNY------STIFR-KLYWIDEGGNGVPLKIGKANMDGSNASILV 310
++ +Y T+F LYW D N V + G+N ++ V
Sbjct: 1577 FCYYNGTGRQQVLAGSHYLLHPHSLTLFEDTLYWTDRQLNRV---LSAHKFKGNNQTV-V 1632
Query: 311 SGQLYEALALDLENGML 327
S + + L++ + + L
Sbjct: 1633 SHLISQPLSIHVHHPSL 1649
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 158/347 (45%), Gaps = 67/347 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C+ K+CDGK DC +GADE C C G C C + G C CP G L+
Sbjct: 232 KCIPKNKLCDGKRDCEDGADEETACSKLSCP-SLG-CEYKCQASLTGGSCYCPDGRKLAP 289
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL----- 118
D+ TC D +EC + G+C Q+CTN+ G Y CSC GY L+ D + C A+N S+ L
Sbjct: 290 DNRTCVDRDECLEWGFCDQICTNSDGGYKCSCAPGYALK-DKNKCNALNASSMMLYFVHD 348
Query: 119 --------------IIS------------NRHSILVADLEEKGKDHRAQ----------- 141
+I+ N++ + +D + K + H Q
Sbjct: 349 KAIFRMSPTGQDVQVIANTTGASGLDFHYNKNMLFWSDTKTK-RIHSQQLKMSSNGITTI 407
Query: 142 ---DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNITQPRGM 197
D+ + G+ L +A DW+G +Y DS +++V + ++ N+T P +
Sbjct: 408 TDIDVALPGMWLPVAIAVDWVGNKLYVADSVGQKVDVFELPSARWHAIVLGSNLTNPADL 467
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP+ G +LF D + ++ R MDG+N I+S Y +G+ +DI +RV++ DS
Sbjct: 468 ALDPTVG--YLFVAD---SSQVLRANMDGTNAHAIVSEAAYKASGIAVDIIAKRVFWCDS 522
Query: 258 KLDFID------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
LD+I+ + + + + ++YW D GV
Sbjct: 523 LLDYIETVDYNGQRRFLVVRGQSVPSPARLALFESRVYWTDGTKQGV 569
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 110/237 (46%), Gaps = 49/237 (20%)
Query: 78 GYCSQMC--TNTKGS--YICSCNEGYVLEYDNHTCKAINH-------------------- 113
G C MC TNT GS + C+C+ G+ L D TC +
Sbjct: 615 GACHHMCIITNTGGSLGFRCACDTGFRLTADERTCDLVTEFLMYSQQRFIKGKVLDPVIE 674
Query: 114 ---SAAFLIISNRHSILVADLEEKGKD--------------HR---AQDIVVSGLDL-VE 152
A ++S R + D + + + HR +++IV++ + VE
Sbjct: 675 GFSDAMLPVVSRRARFVGLDFDARDQHIYYSDVLQDVIYRVHRNGTSREIVLASQNEGVE 734
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
GLA DW ++Y++DSR + V N T R L K N+ +PR +++ P+ G +LF++
Sbjct: 735 GLAVDWASKNLYYIDSRKGTLNVLSTRNVTYRRTLLK-NLKRPRAIVVHPNKG--YLFFS 791
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
+W I R DG+N + + + WPNGL++D R+Y+ D+ LD + +L+
Sbjct: 792 EWDRPANISRAASDGTNLTVFKNLTLGWPNGLSIDFQQDRLYWCDALLDHVQHSNLD 848
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 13/107 (12%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSG-QLYEALALDLENGMLYYSTLKCTRWLF 339
KL+W D+GG+GVP KIGK NMDGSNA +LV + A+ +D++ +LYYST
Sbjct: 1844 KLFWTDDGGSGVPQKIGKVNMDGSNAVVLVDEVERPNAITVDIDTKILYYSTQF------ 1897
Query: 340 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 386
P I I GSN I++ + L + R+++ D
Sbjct: 1898 ------PPSIVSIDYYGSNSKVILTEENAISKPKALGVMGSRLFYLD 1938
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 13/115 (11%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR---IVLAKD----NITQPRGMMLDPSP 203
+A+DW+G +++ + + E +G + ++LA D ++ +PR M LDP+
Sbjct: 1783 ASAIAFDWLGRNLFIGNRVASNFEAVRVDGKVKHRTVILANDGNKTSVAKPRAMCLDPTE 1842
Query: 204 GTRWLFWTDWGEN---PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G LFWTD G + +I ++ MDGSN + ++ ++ PN +T+DI T+ +Y++
Sbjct: 1843 GK--LFWTDDGGSGVPQKIGKVNMDGSN-AVVLVDEVERPNAITVDIDTKILYYS 1894
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 14/89 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALC---------- 53
RC+ + CD + DC +G+DEG C C + C T H P +C
Sbjct: 1069 RCIPNSWKCDSENDCGDGSDEGESCAEKTCAYYQFTCPRTGHCIPQNWVCDGDDDCFDKQ 1128
Query: 54 ---TCPPGEILSNDSVTCQDMNECEQPGY 79
CPP N C D+ +C Q Y
Sbjct: 1129 DEQDCPPITCQPN-QFKCADLRQCVQESY 1156
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 338 LFWTDWGEN---PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDF 394
LFWTD G + +I ++ MDGSN + ++ ++ PN +T+DI T+ +Y++ I
Sbjct: 1845 LFWTDDGGSGVPQKIGKVNMDGSN-AVVLVDEVERPNAITVDIDTKILYYSTQFPPSIVS 1903
Query: 395 CNYDGTGRQQVI 406
+Y G+ + ++
Sbjct: 1904 IDYYGSNSKVIL 1915
>gi|312381670|gb|EFR27366.1| hypothetical protein AND_05975 [Anopheles darlingi]
Length = 4689
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/377 (55%), Positives = 249/377 (66%), Gaps = 54/377 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V RCVNLT VCD DCPNGADEG GCDLA+C+H+ GLC+N C TPLGALC CPPGE
Sbjct: 1318 VTGRCVNLTSVCDDTPDCPNGADEGLGCDLAQCQHQAGLCTNGCQKTPLGALCICPPGEE 1377
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
L D TCQD++EC PG CSQ CTNTKGSY CSC +GYVLE + HTCKA+NHSAAFLII
Sbjct: 1378 LGPDGRTCQDLDECAPPGLCSQRCTNTKGSYFCSCVDGYVLEPNKHTCKAVNHSAAFLII 1437
Query: 121 SNRHSILVADLEEKG-------------------------------------KDHRAQDI 143
SNRHSILVADL E+G + Q++
Sbjct: 1438 SNRHSILVADLREQGLERVPIIVENVVATASNMHTGTIFWSDMKLKKISRLDRGQEPQEL 1497
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ +GLDLVEGLAYDWIG ++YWLDS+LN IEV ENG+NR+VL ++NITQPRGM LDP+P
Sbjct: 1498 ITTGLDLVEGLAYDWIGQNLYWLDSKLNTIEVAHENGSNRLVLVRENITQPRGMCLDPAP 1557
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
RWLFWTDWGENPRIERIG+DG+ R+TIISTKIYWPNGLTLD+AT+RVYFADSKLDFID
Sbjct: 1558 SARWLFWTDWGENPRIERIGLDGTMRATIISTKIYWPNGLTLDVATQRVYFADSKLDFID 1617
Query: 264 -------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
S + + S LYW D N V + G+N ++ V
Sbjct: 1618 FCYYNGTGRQQVLAASHYLLHAHSLSLFEDTLYWTDRQLNRV---LSAHKYRGTNQTV-V 1673
Query: 311 SGQLYEALALDLENGML 327
S + + L++ + + L
Sbjct: 1674 SHLISQPLSIHVHHPSL 1690
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 190/433 (43%), Gaps = 99/433 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C++ VC+ DC + +DE C++ EC K + C + C T G C C G L
Sbjct: 3103 QCIDYQLVCNKVPDCADESDEPLHCNVDECAKVEIHRCGHKCVDTLTGYYCDCNQGYKLL 3162
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYV-LEYDNHTCKAINHSAAFLII 120
D C D++EC E PG CSQ C+NT G Y C C+E Y + D HTCK + + +LI
Sbjct: 3163 EDGKACADIDECIETPGVCSQHCSNTPGGYYCKCDERYYERQNDEHTCKRKDRTEPWLIF 3222
Query: 121 SNRHSILVADLEEKGKDHRAQDIV-VSGLDL----------------------------- 150
SN++ + ++ + QD++ V +D
Sbjct: 3223 SNKYYVRNMSIDGHQYNLIHQDLMNVVAIDFDMQRQEMYFCDVTAKTIFRSRFGSLVDDV 3282
Query: 151 --------------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+EG+A DW+G +YWLD ++V + +GT R L + + PR
Sbjct: 3283 RIEKEPVIKHDSHGLEGIAIDWVGRKLYWLDRHSKNLDVAELDGTRRKTL-RSGVVDPRA 3341
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYF 254
+++ PG +L++T W I ++GMDGSN S I++ I WPN LT+D T R+Y+
Sbjct: 3342 IVV--HPGIGYLYFTSWHLQAYIAKMGMDGSNFSRILTWEDNIAWPNALTIDYFTDRIYW 3399
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG-Q 313
AD+ LD+ I A+++G + I++SG
Sbjct: 3400 ADAHLDY----------------------------------IAFADLEGRHRHIVLSGTS 3425
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
+ AL + + LY WTDW + G+N T+I + P +
Sbjct: 3426 VPHVFALAIFDDSLY-----------WTDWNLKAILRANKFTGAN-YTVIRNTTHRPYDI 3473
Query: 374 TLDIATRRVYFAD 386
+ A R++ +A+
Sbjct: 3474 HISHALRQIPYAN 3486
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 165/367 (44%), Gaps = 58/367 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C+ K+CDGK DC +G DE C A C G C + C P+ G +C CPPG LS
Sbjct: 269 KCIMKAKLCDGKRDCEDGTDEETACSTASCP-ALG-CEHKCGPSLTGGICYCPPGRTLSP 326
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY------------------VLEYDN 105
D+ TC D++EC G+C Q+CTNT GS+ C+C GY V YD
Sbjct: 327 DNRTCADLDECSVWGHCDQLCTNTDGSFSCACATGYQLIETQRCVAPTASSLELVFAYDR 386
Query: 106 HTCKAINHSAAFLIISN------------RHSILVADLEEKGKDHR--------AQDIVV 145
+ H II+N ++ + +D++ + + D +
Sbjct: 387 AIVRMSAHGQDSRIIANATGASGLALHYAKNLLYWSDVKTRKVQSQVLTDGGFGGHDFTL 446
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
G +A DW+G +Y D +++V + +G V+ N+T P + LDP+ G
Sbjct: 447 PGTWAPVAIAIDWVGDKLYVADLVGQKVDVFELDGRWHAVVLGSNLTSPADLALDPTAGL 506
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
++ + + R MDG++ +I+S Y +G+ +D+ +RV++ DS LD+I+
Sbjct: 507 MFV-----ADGSHVLRAHMDGTHAKSIVSEAAYKASGVAVDVIAKRVFWCDSLLDYIESV 561
Query: 266 SLEIKTNV------------NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
S E + V + +++W D G+ + + K + S SI +
Sbjct: 562 SYEGEQRVMILRGQQVPSPSRLALFENRVFWSDATKQGI-MSVDKFDGSTSIQSIFKAKD 620
Query: 314 LYEALAL 320
+ E A+
Sbjct: 621 IREPRAI 627
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 160/401 (39%), Gaps = 80/401 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTC-HPTPLGALCTCPPGEIL 61
+C+ ++CD DC +G+DE + C G C + C + T G +C C G I+
Sbjct: 3964 KCIERAQICDYADDCGDGSDELGCHHTSSCTAVARGGCEHQCVNLTDGGYICACHAGFII 4023
Query: 62 -SNDSVTCQDMNECEQPGY-CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI 119
+ + C D++EC + CS +CTN G+Y CSC EG+ L + L+
Sbjct: 4024 DAGNKKRCTDIDECATGTHGCSHLCTNLNGTYECSCREGFQLSDSVSGVCRVLRDDPLLV 4083
Query: 120 ISNRHSILVADLEEK------GKDHR---------------------------------- 139
+S I D+ + G + R
Sbjct: 4084 LSGGTEIRAYDVGQAHQYGVIGGEKRIEALDYNPESQMIFWTDSYDKTIKRSYMLNAMNG 4143
Query: 140 ------AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN------RIEVCDENGTNRIVLA 187
AQD+ + G LA DW+ ++YW ++ RI V +G R L
Sbjct: 4144 EAKVGFAQDLNMKGNSKPTALAVDWVADNLYWAETDRTGSKPRGRIMVAKTDGRYRRALV 4203
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ + P + +DP G LF D G P+IE MDGS R II+ I P GLT+D
Sbjct: 4204 QAGLEVPTAIAVDPQFGR--LFVADAGSAPKIEISWMDGSKRRPIITEAIRHPAGLTIDY 4261
Query: 248 ATRR--VYFADSKLDFIDC------------KSLEIKTNVNYSTIFRKLYWI--DEGGNG 291
A VY+ D+KL+ I+ K +K V+ LYWI D G
Sbjct: 4262 AQEHHMVYWVDTKLNTIEVMKPDGTMRRTVLKGELLKHPVSLDVFESSLYWITRDTG--- 4318
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
++ + + G + V L ++ + + + Y +TL
Sbjct: 4319 ---ELLRQDKFGRGVQVTVQRNLANPSSIKVYHELRYNTTL 4356
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 178/468 (38%), Gaps = 131/468 (27%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD--LAECKHKFGLCSN-TC---------------H 45
RC+N VCD DC +G+DEG C+ C + C N C H
Sbjct: 3020 RCINRGWVCDHDNDCGDGSDEGKSCNSQYKTCTPQEFTCQNFKCIRNQYRCDGEDDCGDH 3079
Query: 46 PTPLGAL---CTCPPG------------EILSNDSVTCQD---------MNECEQP--GY 79
+G TCP G +++ N C D ++EC +
Sbjct: 3080 SDEVGCRKENATCPDGKFTCTSGQCIDYQLVCNKVPDCADESDEPLHCNVDECAKVEIHR 3139
Query: 80 CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHR 139
C C +T Y C CN+GY L D C I+ + ++H
Sbjct: 3140 CGHKCVDTLTGYYCDCNQGYKLLEDGKACADIDECIETPGVCSQH--------------- 3184
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+ GG+ D R E + + + T+P
Sbjct: 3185 ---------------CSNTPGGYYCKCDERYY------ERQNDEHTCKRKDRTEP----- 3218
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--S 257
WL +++ + + +DG ++ +I + + D+ + +YF D +
Sbjct: 3219 -------WLIFSN---KYYVRNMSIDG-HQYNLIHQDLMNVVAIDFDMQRQEMYFCDVTA 3267
Query: 258 KLDF-------IDCKSLEIKTNVNYST----------IFRKLYWIDEGGNGVPLKIGKAN 300
K F +D +E + + + + + RKLYW+D + + A
Sbjct: 3268 KTIFRSRFGSLVDDVRIEKEPVIKHDSHGLEGIAIDWVGRKLYWLDRHSKNLDV----AE 3323
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DG+ L SG + + A+ + G+ Y L++T W I ++GMDGSN S
Sbjct: 3324 LDGTRRKTLRSG-VVDPRAIVVHPGIGY---------LYFTSWHLQAYIAKMGMDGSNFS 3373
Query: 361 TIIS--TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I++ I WPN LT+D T R+Y+AD+ LD+I F + +G R V+
Sbjct: 3374 RILTWEDNIAWPNALTIDYFTDRIYWADAHLDYIAFADLEGRHRHIVL 3421
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 16/161 (9%)
Query: 141 QDIVVSGL--DLVEGLAYDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRG 196
Q IV G+ + + GLA DW+ G++Y+ + N +EV +GT+R VL + PR
Sbjct: 2144 QHIVRDGIGSNGIRGLAIDWVAGNLYFTNVFPHENYVEVAWLDGTHRKVLVRTTNDAPRE 2203
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ ++P R L+W D+G+ PRI + +DG N + ++++ I P LT+D+ T VY+ D
Sbjct: 2204 LAVNPI--KRLLYWIDYGQFPRIGKCHLDGGNWTPVVTSGISNPRDLTVDMLTHDVYWVD 2261
Query: 257 SKLDFIDCKSLE------IKTNV----NYSTIFRKLYWIDE 287
SKLD I S I+ N+ + +YW+D
Sbjct: 2262 SKLDMIQKVSYSGGNRQVIRRNLANPMAIAVFLSDVYWVDR 2302
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 137/349 (39%), Gaps = 79/349 (22%)
Query: 79 YCSQMC---TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
+C +C + Y C C GY L + + N AF+++ + I+ D+ G
Sbjct: 1709 HCQHLCLLSPSAPAGYACKCRPGYRLVEEERCVEEEN---AFIVLMKGNQIV--DVPFNG 1763
Query: 136 KDHRAQDIV-VSGLDLVEGLAYDWIGGHIYWLDSRLNRI-EVCDENGTNRIVL--AKDNI 191
D R+ ++ V G+D GL YD G +YW+ R E DEN T N
Sbjct: 1764 GDVRSSALLPVVGIDGGLGLDYDRQGEQLYWIQGRAGSTDESDDENCTIYTTPYGGGGNR 1823
Query: 192 TQPRGMMLDPSPGTRWLFWTDW-GEN--------PRIERIGMDGSNRSTII-------ST 235
T+ G D G + DW G N IE I +DG R I T
Sbjct: 1824 TEFLGGA-DGLVGAAYTLAFDWIGRNLYIGNRIASNIETISVDGKQRYRAIILSNDGNRT 1882
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
+ P L LD A R L+W+D+GG GV K
Sbjct: 1883 SVAKPRQLALDPAAGR------------------------------LFWLDDGGFGVLTK 1912
Query: 296 IGKANMDGSNASILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+ A MDGS +IL Q E++ +D E +YYST P + IG
Sbjct: 1913 LAAAGMDGSEPTILDDTIQYVESVTVDAERRTVYYSTQF------------PPAVHAIGY 1960
Query: 355 DGSNRSTIISTK--IYWPNGLTLDIATRRVYFAD---SKLDFIDFCNYD 398
DG+ R T++S + I P GL + R+YF D KL +D N D
Sbjct: 1961 DGTGRRTVLSEENAIARPRGLA--VHESRLYFIDPTYEKLVRVDLPNGD 2007
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 91/194 (46%), Gaps = 43/194 (22%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ G++ EG+AYDW IYW DS N I + +GT +++A+ + +PR ++LDP
Sbjct: 2467 VITRGIN-PEGIAYDWTQRKIYWTDSSNNSIYAMNTDGTELVMIAR--VERPRAIVLDPC 2523
Query: 203 PGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
GT L++TDWG + +I R M GS + I+ + P+GL +D
Sbjct: 2524 NGT--LYYTDWGRFGTSGKIFRTTMAGSLKRAIVDRDLSQPSGLAIDYDD---------- 2571
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
R LYW D V KI +A +DG +L+S +Y A
Sbjct: 2572 --------------------RMLYWTD----AVREKIERAQLDGRGREVLISATIY-PFA 2606
Query: 320 LDLENGMLYYSTLK 333
+ + +Y++ L+
Sbjct: 2607 ITVFRNYIYWTDLQ 2620
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 50/239 (20%)
Query: 78 GYCSQMC--TNTKGS-----YICSCNEGYVLEYDNHTCKAINH----------------- 113
G CSQMC T +G+ Y C+C+ G+ L D C +
Sbjct: 647 GGCSQMCVVTAVQGAPSGLGYRCACHTGWQLSKDLMNCNLVRQFLMYSQQRFIKGKVLDP 706
Query: 114 ------SAAFLIISNRHSILVADLEEKGKD--------------HR---AQDIVVSGLDL 150
A ++S R + D + + HR ++IV++ +
Sbjct: 707 VIEGFSDAILPVVSRRARFVGLDFDAVDEHIYYSDVLQDVIYRVHRNGTGREIVLASQNE 766
Query: 151 -VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
VEGLA DW+ ++Y++DSR + V T+ N+ +PR +++ P+ G +L+
Sbjct: 767 GVEGLAVDWVSKNLYYIDSRKGTLNVLSTRNTSYRRTLLKNLKRPRAIVVHPNRG--YLY 824
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
+++W I R DG+ + + WPNGL++D RVY+ D+ LD + +L+
Sbjct: 825 FSEWDRPANISRANADGTGLMVFRNVTLGWPNGLSIDFREDRVYWCDALLDHVQHANLD 883
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+ Y RK+YW D N I N DG+ ++ + A+ LD NG LYY+
Sbjct: 2477 IAYDWTQRKIYWTDSSNN----SIYAMNTDGTELVMIARVERPRAIVLDPCNGTLYYTD- 2531
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
W +G + +I R M GS + I+ + P+GL +D R +Y+ D+ + I
Sbjct: 2532 -------WGRFGTSGKIFRTTMAGSLKRAIVDRDLSQPSGLAIDYDDRMLYWTDAVREKI 2584
Query: 393 DFCNYDGTGRQQVI 406
+ DG GR+ +I
Sbjct: 2585 ERAQLDGRGREVLI 2598
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
R L+W D+G+ PRI + +DG N + ++++ I P LT+D+ T VY+ DSKLD I
Sbjct: 2211 RLLYWIDYGQFPRIGKCHLDGGNWTPVVTSGISNPRDLTVDMLTHDVYWVDSKLDMIQKV 2270
Query: 396 NYDGTGRQQVILIDL 410
+Y G G +QVI +L
Sbjct: 2271 SYSG-GNRQVIRRNL 2284
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 102/248 (41%), Gaps = 41/248 (16%)
Query: 163 IYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD---WGENPRI 219
I+ + + IE+ D TN N+T G+ D + LF+T W + +
Sbjct: 2398 IFATRTEIRSIEL-DPTSTNVPFAPVVNLTNVVGLDFDYADNK--LFFTQIRPWSKIAYL 2454
Query: 220 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIF 279
D + + +I+ I P G+ D R++Y+ DS + I + + V + +
Sbjct: 2455 RGDKPDAAGVTAVITRGIN-PEGIAYDWTQRKIYWTDSSNNSIYAMNTDGTELVMIARVE 2513
Query: 280 RK-----------LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGM 326
R LY+ D G G KI + M GS +V L + LA+D ++ M
Sbjct: 2514 RPRAIVLDPCNGTLYYTDWGRFGTSGKIFRTTMAGSLKRAIVDRDLSQPSGLAIDYDDRM 2573
Query: 327 LYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL--------DIA 378
LY WTD +IER +DG R +IS IY P +T+ D+
Sbjct: 2574 LY-----------WTD-AVREKIERAQLDGRGREVLISATIY-PFAITVFRNYIYWTDLQ 2620
Query: 379 TRRVYFAD 386
R VY A+
Sbjct: 2621 LRGVYRAE 2628
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 42/101 (41%), Gaps = 15/101 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALC---------- 53
RC+ CD + DC +G+DEGP C C + C T H P +C
Sbjct: 1111 RCIPNIWKCDSENDCGDGSDEGPFCAEKTCAYFQFTCPRTGHCIPQSWVCDGDDDCFDKQ 1170
Query: 54 ---TCPPGEILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGS 90
CPP L+N C D+ +C E+P C + GS
Sbjct: 1171 DEKDCPPITCLAN-QFKCADLRQCVEEPYKCDSIPDCNDGS 1210
>gi|383859306|ref|XP_003705136.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Megachile rotundata]
Length = 4572
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/377 (54%), Positives = 252/377 (66%), Gaps = 54/377 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V DRCVN+T VCDGK DCPNGADEGPGCD+ ECK++ G CSN C TPLG CTCP GE
Sbjct: 1335 VTDRCVNVTSVCDGKFDCPNGADEGPGCDIPECKYRGGYCSNGCIQTPLGKQCTCPAGEE 1394
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
L D CQD++ECE PG CSQ+C N KGSY C+C +GY LE D HTCKA NHSAAFLII
Sbjct: 1395 LGADGYACQDVDECEPPGRCSQICVNVKGSYYCNCVDGYSLEGDKHTCKAFNHSAAFLII 1454
Query: 121 SNRHSILVADLEEKG-------------------------------------KDHRAQDI 143
SNRH+ILVADL+++ + +D+
Sbjct: 1455 SNRHTILVADLQDQALERVPINVENVVATVSNMHTGTIFWSDMKLKKISRLDRGSDPEDV 1514
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+++GLDLVEGLAYDWIG ++YWLDS+LN IEV ENG +R++L K+NITQPRGM LDPSP
Sbjct: 1515 ILTGLDLVEGLAYDWIGQNLYWLDSKLNTIEVARENGADRMILVKENITQPRGMCLDPSP 1574
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G RWLFWTDWGENPRIERIGMDG+NRSTIISTKIYWPNGL LDIA +R+YFADSKLDFID
Sbjct: 1575 GARWLFWTDWGENPRIERIGMDGTNRSTIISTKIYWPNGLALDIANKRIYFADSKLDFID 1634
Query: 264 ------CKSLEIKTNVNY------STIFR-KLYWIDEGGNGVPLKIGKANMDGSNASILV 310
K +++ + +Y T+F +YW D N V + G N ++ V
Sbjct: 1635 TCLYDGTKRIQVLASSHYLLHPHSLTLFEDTMYWTDRQLNRV---LSAHKFYGVNQTV-V 1690
Query: 311 SGQLYEALALDLENGML 327
S + + L++ + + +L
Sbjct: 1691 SHLISQPLSIHVHHPVL 1707
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 151/307 (49%), Gaps = 46/307 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++ VC+ + DC + +DE C++ EC + C++ C TP C C PG L
Sbjct: 3066 CIDQQLVCNKEVDCADESDEPAHCNVDECARVEMNQCAHKCVDTPTSYYCECNPGYRLLA 3125
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEG-YVLEYDNHTCKAINHSAAFLIIS 121
D C+D++EC E P CSQ C NT GS+ C CN Y D HTCK ++ ++I +
Sbjct: 3126 DGKACEDIDECTETPQVCSQQCQNTPGSFYCKCNHYWYERASDEHTCKRRDNIKPWIIFT 3185
Query: 122 NRHSILVADLEEKGKDHRAQDIV-VSGLDL------------------------------ 150
N++ + ++ QD++ V LD
Sbjct: 3186 NKYYVRNMSIDAHNYSLMHQDLINVVALDADYSEQMLYFCDVTAKTIFRAPIAGGEREAI 3245
Query: 151 -------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+EG+A DW+G +YWLD ++V + NGTNR L I PR +++ P
Sbjct: 3246 IRHDSLGLEGIAIDWVGRKLYWLDRHAKHLDVAELNGTNRKTLLT-GIADPRAIVV--HP 3302
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDF 261
GT +L++T W I ++GMDGSN S I++ I WPN LT+D T R+++AD+ LD+
Sbjct: 3303 GTGYLYFTSWHLQAYIGKMGMDGSNFSRILTWEDDIAWPNALTIDYFTDRIFWADAHLDY 3362
Query: 262 IDCKSLE 268
I LE
Sbjct: 3363 IAFADLE 3369
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 136/537 (25%), Positives = 216/537 (40%), Gaps = 126/537 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C++ +++CDGK DC + DEG C C C C +P G +C CP G +L+ND
Sbjct: 286 CIDRSQLCDGKPDCEDETDEGFACSTNMCNTL--RCHYKCRASPTGGVCYCPAGWVLAND 343
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC D +EC + G+C Q+C NT+ SYICSC G+VL+ N C+A+ H L +
Sbjct: 344 SRTCVDRDECSEWGFCEQLCENTESSYICSCASGFVLQGHNK-CRAVQHPGVKLELLIAQ 402
Query: 125 SILVADLEEKGKDHR--AQDIVVSGLDLV------------------------EG----- 153
V + G+D A SG+D + EG
Sbjct: 403 ERAVWRMSANGEDRSIIANTTGASGVDYLYSRDLLFWSDVKTRKVHSEPLTGSEGTGSNV 462
Query: 154 ------------LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+A DWIG +Y +DS + +I+V + +G + N+T P + LDP
Sbjct: 463 DIFLASSWGPVAIAVDWIGEKLYVVDSIVQKIDVFELDGRYHGIALGSNLTNPTDIGLDP 522
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
+ G ++ ++ ++ R MDG+ ++S Y +G+ +D+ RR+++ DS+LD+
Sbjct: 523 TVGLMFV-----ADSKQVLRANMDGTVAFPVVSEAAYKVSGIAVDVIARRIFWCDSQLDY 577
Query: 262 IDCKSLEIKTNV-----------NYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASI- 308
I+ + V T+F K+YW D G + + K D S +I
Sbjct: 578 IETADYLGRNRVMVLRGPHTPSPTRLTLFENKIYWTD-GTKQAIMSVDKTEGDYSIQTIY 636
Query: 309 -LVSGQLYEAL---------------------------ALDLENGMLYYSTLKCTRWLFW 340
+ + +AL A D EN + Y W
Sbjct: 637 KMRDAKAIKALHPLTQPSVSNPCGNNNGGCQHMCIVTAASDQENRLGYRCACD-IGWRLS 695
Query: 341 TDWGENPRIERIGMDGSNRSTIISTKIYWP-------------------NGLTLDIATRR 381
+D ++ M R I ++ P GL D +
Sbjct: 696 SDQRNCNLVQEFLMYSQQR--FIKGRVLDPVMEGFSDAILPVVSRRARFVGLDYDAHDQY 753
Query: 382 VYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYY 438
+Y++D D I + +GTGR+ V+ + GV LA+D LYY
Sbjct: 754 IYYSDVLQDVIYRIHQNGTGREIVLASQ-----------NEGVEGLAVDWAAKNLYY 799
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 173/390 (44%), Gaps = 98/390 (25%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE--CKHKFGLCSNTCHP-TPLGALCTCPPGEI 60
+CV+ +K+CD DC + +DE GC + + G CS+ CH T G +C C G I
Sbjct: 3929 KCVDRSKLCDFADDCGDSSDE-LGCHHNKPCLESNKGGCSHYCHNITDGGYICACYSGYI 3987
Query: 61 LS-NDSVTCQDMNECEQPGY-CSQMCTNTKGSYICSCNEGYVLEYDNHT--CKAINHSAA 116
+S ++ C+D++EC + CSQ+CTN G+Y CSC +G+ L DN + CKA++ A
Sbjct: 3988 ISQSNRKHCEDVDECATGQHQCSQICTNMNGTYSCSCRQGFQLS-DNRSGVCKALDTEAM 4046
Query: 117 FL-------------------IISNRHSILVADLEEK--------GKDHR---------- 139
L +I+N + D + K G D+
Sbjct: 4047 VLFANGPGIRAYDVRDKEEIEVITNEKRVQAVDFDPKAEYVFWIDGPDNSIRRSYMVNAK 4106
Query: 140 --------AQDIVVSGLDLVEGLAYDWIGGHIYWLD------SRLNRIEVCDENGTNRIV 185
AQD+ + L GLA DWI G++YW + ++ R+ V +G R
Sbjct: 4107 GGQVQIGYAQDLNIKSDSLPTGLAVDWISGNLYWTEVDTSGATQSGRVMVSKSDGRYRRS 4166
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
L + P ++LDP G W D G P+IE MDG R ++S +I P L +
Sbjct: 4167 LVTVGLELPTAIVLDPERGR--AIWADAGGQPKIEIAWMDGDRRKQLVSDRIEQPIALAI 4224
Query: 246 DIATRRV-YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
D + V Y+AD KL+ I+ S+E DGS
Sbjct: 4225 DYSMNHVLYWADRKLNTIE--SIE--------------------------------QDGS 4250
Query: 305 NASILVSGQ-LYEALALDLENGMLYYSTLK 333
N +++ G+ L+ ++LD+ LY++T +
Sbjct: 4251 NRKVILKGEGLHHPVSLDVFESSLYWTTWR 4280
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 91/178 (51%), Gaps = 22/178 (12%)
Query: 141 QDIVVSGL--DLVEGLAYDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRG 196
Q IV G+ + + GLA DW+ ++Y+ + N +EVC +G+NR VL K PR
Sbjct: 2147 QHIVKQGIGSNGIRGLAIDWVAENLYFTNVFPHDNYVEVCKLDGSNRKVLVKKTTDSPRE 2206
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ ++P R+L+W D+G+ PR+ + +DGSN I+++ I P +T+D+AT VY+ D
Sbjct: 2207 LAVNPI--KRYLYWIDYGQYPRLGKAYLDGSNWVPIVTSGISTPRDITIDLATHDVYWVD 2264
Query: 257 SKLDFIDCKSLEIKTNVNYSTIFRKL-------------YWIDEGGNGVPLKIGKANM 301
SK D I S T N I R L YW+D V +AN+
Sbjct: 2265 SKQDTIQKVSY---TGANREIIRRNLPNPMGVAIYGNDVYWVDRNLATVFKASKRANV 2319
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 102/245 (41%), Gaps = 64/245 (26%)
Query: 78 GYCSQMCTNTKGS-------YICSCNEGYVLEYDNHTCKAINH----------------- 113
G C MC T S Y C+C+ G+ L D C +
Sbjct: 664 GGCQHMCIVTAASDQENRLGYRCACDIGWRLSSDQRNCNLVQEFLMYSQQRFIKGRVLDP 723
Query: 114 -----SAAFLIISNRHSILVADLEEKGKDHRAQD-------------------------I 143
S A L + +R + V G D+ A D +
Sbjct: 724 VMEGFSDAILPVVSRRARFV------GLDYDAHDQYIYYSDVLQDVIYRIHQNGTGREIV 777
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPS 202
+ S + VEGLA DW ++Y++DSR + V +N T R L K N+ +PR +++ P+
Sbjct: 778 LASQNEGVEGLAVDWAAKNLYYIDSRKGTLNVLSTQNVTYRRTLLK-NLKRPRAIVIHPN 836
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G ++F+++W I R DGSN + + WPNGL +D A R+Y+ D+ LD +
Sbjct: 837 HG--YIFFSEWDRPANISRAYTDGSNLIVFRNLTLGWPNGLAIDFAKDRLYWCDALLDHV 894
Query: 263 DCKSL 267
+L
Sbjct: 895 QHSNL 899
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 42/185 (22%)
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EG++YDW +YW DS N I D +G+N +++A+ + +PR +++DP G+ L++T
Sbjct: 2479 EGISYDWTQKKVYWTDSSNNSIYAMDIDGSNLVMIAR--VDRPRAIVVDPCNGS--LYFT 2534
Query: 212 DWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
DWG + +I R M GS + II + P+GL +D
Sbjct: 2535 DWGRFGTSGKIFRTTMAGSLKKAIIDKDLSQPSGLAIDYED------------------- 2575
Query: 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLY 328
R LYW D V KI ++ +DG N +LVS +Y A+ + +Y
Sbjct: 2576 -----------RMLYWTD----AVREKIERSELDGKNRQVLVSATIY-PFAITVFREHIY 2619
Query: 329 YSTLK 333
++ L+
Sbjct: 2620 WTDLQ 2624
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 173/423 (40%), Gaps = 86/423 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT---CPPGEI 60
+C+ CDG+ DC + +DE C K NT P P +C C ++
Sbjct: 3021 KCIRKQFRCDGQDDCGDHSDED------GCPSKV---KNTTCPNPGEFMCANGNCIDQQL 3071
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
+ N V C D E ++P +C+ +E +E + K ++ ++
Sbjct: 3072 VCNKEVDCAD--ESDEPAHCNV-------------DECARVEMNQCAHKCVDTPTSYYCE 3116
Query: 121 SNRHSILVADLEE-KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDEN 179
N L+AD + + D + V + + YW + DE+
Sbjct: 3117 CNPGYRLLADGKACEDIDECTETPQVCSQQCQNTPGSFYCKCNHYWYE------RASDEH 3170
Query: 180 GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYW 239
R +DNI W+ +T+ + + +D N S ++ +
Sbjct: 3171 TCKR----RDNIKP-------------WIIFTN---KYYVRNMSIDAHNYS-LMHQDLIN 3209
Query: 240 PNGLTLDIATRRVYFAD--------------SKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
L D + + +YF D + I SL ++ + + RKLYW+
Sbjct: 3210 VVALDADYSEQMLYFCDVTAKTIFRAPIAGGEREAIIRHDSLGLE-GIAIDWVGRKLYWL 3268
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
D + + A ++G+N L++G + + A+ + G T +L++T W
Sbjct: 3269 DRHAKHLDV----AELNGTNRKTLLTG-IADPRAIVVHPG---------TGYLYFTSWHL 3314
Query: 346 NPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403
I ++GMDGSN S I++ I WPN LT+D T R+++AD+ LD+I F + +G R+
Sbjct: 3315 QAYIGKMGMDGSNFSRILTWEDDIAWPNALTIDYFTDRIFWADAHLDYIAFADLEGHNRR 3374
Query: 404 QVI 406
+V+
Sbjct: 3375 KVL 3377
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 137/355 (38%), Gaps = 69/355 (19%)
Query: 72 NECEQPGYCSQMCTNTKGS---YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILV 128
N CE C +C + S Y C C G+ L N C + +L++ I+
Sbjct: 1713 NPCEN-ASCGHLCLLSPTSPEGYSCKCQVGFRL-LPNGQC--LEEETPYLMVLRGSQIVD 1768
Query: 129 ADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT------- 181
L G + V G++ + + YD IYWL ++ + DENGT
Sbjct: 1769 VSLI-PGSTNTGYITPVVGVEGGKFVDYDRKERTIYWLQTKDDD----DENGTIYTTPYS 1823
Query: 182 --NRIVLAKDNITQPRGMMLDPSP------GTRWLFWTDWGENPRIERIGMDGSNRSTII 233
NR N + G++ PS G + N IE I +DG R I
Sbjct: 1824 GGNRTEFP--NPSGESGIVGAPSAMAFDWLGRNLFIGNKYASN--IEAIKVDGKIRYRTI 1879
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
+ +G +A + D + ++WID+G G+P
Sbjct: 1880 ---VLANDGNKSSVAKPKAMCVDP--------------------LEGHIFWIDDGSFGIP 1916
Query: 294 LKIGKANMDGSNASILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
KIG+ NMDG+N ILV+ + EA+ +D+ +Y+S+L + I
Sbjct: 1917 TKIGRVNMDGTNPMILVNKVERLEAITIDIPTKTIYFSSLY------------PALVMAI 1964
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
DG N TI+S I P L + R+Y D + D I+ + G +I+
Sbjct: 1965 STDGRNLRTIVSENIALPKALA--VHESRLYLLDPRYDKIERVDLPDGGNPTIII 2017
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGSN +LV L + R+L+W D+G+ PR+ + +DGSN
Sbjct: 2188 LDGSNRKVLVKKTTDSPRELAVN---------PIKRYLYWIDYGQYPRLGKAYLDGSNWV 2238
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403
I+++ I P +T+D+AT VY+ DSK D I +Y G R+
Sbjct: 2239 PIVTSGISTPRDITIDLATHDVYWVDSKQDTIQKVSYTGANRE 2281
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 12/134 (8%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
++Y +K+YW D N I ++DGSN ++ A+ +D NG LY++
Sbjct: 2481 ISYDWTQKKVYWTDSSNNS----IYAMDIDGSNLVMIARVDRPRAIVVDPCNGSLYFTD- 2535
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
W +G + +I R M GS + II + P+GL +D R +Y+ D+ + I
Sbjct: 2536 -------WGRFGTSGKIFRTTMAGSLKKAIIDKDLSQPSGLAIDYEDRMLYWTDAVREKI 2588
Query: 393 DFCNYDGTGRQQVI 406
+ DG RQ ++
Sbjct: 2589 ERSELDGKNRQVLV 2602
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 30/201 (14%)
Query: 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFR---------- 280
T+IS I P G++ D ++VY+ DS + I ++ V + + R
Sbjct: 2470 TLISKGIN-PEGISYDWTQKKVYWTDSSNNSIYAMDIDGSNLVMIARVDRPRAIVVDPCN 2528
Query: 281 -KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRW 337
LY+ D G G KI + M GS ++ L + LA+D E+ MLY
Sbjct: 2529 GSLYFTDWGRFGTSGKIFRTTMAGSLKKAIIDKDLSQPSGLAIDYEDRMLY--------- 2579
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
WTD +IER +DG NR ++S IY + + +Y+ D +L + +
Sbjct: 2580 --WTD-AVREKIERSELDGKNRQVLVSATIY---PFAITVFREHIYWTDLQLRGV-YRAE 2632
Query: 398 DGTGRQQVILIDLMVEFTNDL 418
TG +V L+ + + DL
Sbjct: 2633 KHTGANKVELVKRLEDSPRDL 2653
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 129/326 (39%), Gaps = 76/326 (23%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G C Q+C + G+ +C+C +EY + A +F +++ L
Sbjct: 2044 GGCEQICLPASGGTRVCACG----MEYRKVSDTACEPFKSFAVVTQLDVARGYSL----N 2095
Query: 137 DHRAQDIVVSGL-DLVEGLAYDWIGGHIYWLD-SR--LNRIEVCDENGTNRIVLAKDNIT 192
D + + +SG+ + + + G IYW++ SR N + NGT + K I
Sbjct: 2096 DAKEAMVPISGVGHHILHVDVHYAGNWIYWVEFSREIWNGVFRVRPNGTELQHIVKQGIG 2155
Query: 193 QP--RGMMLDPSPGTRW----LFWTD-WGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
RG+ +D W L++T+ + + +E +DGSNR ++ P L +
Sbjct: 2156 SNGIRGLAID------WVAENLYFTNVFPHDNYVEVCKLDGSNRKVLVKKTTDSPRELAV 2209
Query: 246 DIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305
+ I R LYWID G ++GKA +DGSN
Sbjct: 2210 N------------------------------PIKRYLYWIDYGQYP---RLGKAYLDGSN 2236
Query: 306 -ASILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
I+ SG + +DL T ++W D ++ I+++ G+NR I
Sbjct: 2237 WVPIVTSGISTPRDITIDLA-----------THDVYWVDSKQD-TIQKVSYTGANREII- 2283
Query: 364 STKIYWPNGLTLDIATRRVYFADSKL 389
+ PN + + I VY+ D L
Sbjct: 2284 --RRNLPNPMGVAIYGNDVYWVDRNL 2307
>gi|307208125|gb|EFN85629.1| Low-density lipoprotein receptor-related protein 2 [Harpegnathos
saltator]
Length = 4539
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/377 (54%), Positives = 249/377 (66%), Gaps = 54/377 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V +RC+ VCDGK DCPNG DEG GCDL+EC H+ GLC+N C TP+GA C+CP GE
Sbjct: 1260 VTNRCIPTVNVCDGKPDCPNGGDEGFGCDLSECTHQAGLCTNDCFQTPIGAQCSCPAGEE 1319
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
L++D TCQDMNECE PG CSQ+C NTKGSY C+C EGY LE D HTCKA NHSAAFLII
Sbjct: 1320 LTSDGYTCQDMNECEPPGRCSQICVNTKGSYYCNCVEGYTLEKDKHTCKAFNHSAAFLII 1379
Query: 121 SNRHSILVADLEEKG-------------------------------------KDHRAQDI 143
SNRH+ILVADL+++ + QDI
Sbjct: 1380 SNRHTILVADLQDQALERVPINVENVVATASNMHTGTIFWSDMKLKRISRLDRGSDPQDI 1439
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ +GLDLVEGLAYDWIG ++YWLDS+LN IEV E G R++L K NITQPRGM LDPSP
Sbjct: 1440 ISTGLDLVEGLAYDWIGHNLYWLDSKLNTIEVAKETGAGRMILVKANITQPRGMCLDPSP 1499
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
RWLFWTDWGENPRIERIGMDG+NRSTIISTKIYWPNGL LDIA RR+YFADSKLDFID
Sbjct: 1500 RARWLFWTDWGENPRIERIGMDGNNRSTIISTKIYWPNGLALDIANRRIYFADSKLDFID 1559
Query: 264 ------CKSLEIKTNVNY------STIFR-KLYWIDEGGNGVPLKIGKANMDGSNASILV 310
K +++ + +Y T+F +YW D N V + GSN ++ V
Sbjct: 1560 TCLYDGSKRIQVLASSHYLLHPHSLTLFEDTMYWTDRQLNRV---LSAHKFMGSNQTV-V 1615
Query: 311 SGQLYEALALDLENGML 327
S + + L++ + + +L
Sbjct: 1616 SHLISQPLSIHVHHPVL 1632
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 154/307 (50%), Gaps = 46/307 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++ VC+ + DC + +DE C++ EC + C + C TP C C PG L +
Sbjct: 3036 CIDSQLVCNKEPDCADESDEPLHCNVDECARIELNQCGHKCVDTPTSFYCECNPGYKLLD 3095
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEG-YVLEYDNHTCKAINHSAAFLIIS 121
D C+D++EC E P CSQ C NT GSY C CNE Y E D HTCK ++ ++I +
Sbjct: 3096 DGKACEDIDECIETPQVCSQQCENTPGSYYCKCNERWYEREADEHTCKRRDNIQPWIIFT 3155
Query: 122 NRHSILVADLEEKGKDHRAQDIV-VSGLDL------------------------------ 150
N++ + ++ + QD++ V LD
Sbjct: 3156 NKYYVRNMSIDARNYSLMHQDLINVVALDADYTEQMLYFCDVTAKTIYRAPINGGEREAI 3215
Query: 151 -------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+EG+A DW+G +YWLD ++V + +GTNR L + I PR + + P
Sbjct: 3216 IRHDSLGLEGIAIDWVGRKLYWLDRHAKHLDVSELDGTNRKTL-QSGIADPRAIAV--HP 3272
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDF 261
GT +LF+T W I ++GMDGSN + I++ I WPN LT+D T R+++AD+ LD+
Sbjct: 3273 GTGYLFFTSWHLQAYIGKMGMDGSNFTRILTWEDDIAWPNALTIDYFTDRIFWADAHLDY 3332
Query: 262 IDCKSLE 268
I LE
Sbjct: 3333 IAFADLE 3339
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 173/360 (48%), Gaps = 66/360 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGL--CSNTCHPTPLGALCTCPPGEILS 62
C+N +++CD K DC +GADE C ++ C GL C + C +P G C CP G IL+
Sbjct: 202 CINRSQLCDEKQDCEDGADEEAACSMSMC----GLLNCQHKCQASPTGGACYCPEGRILA 257
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
NDS TC D +EC + G+C Q+C NT GSY+CSC GY L N C+A N S+ L+++
Sbjct: 258 NDSRTCVDRDECSEWGFCEQLCDNTDGSYMCSCALGYTLHGRN-KCRAQNFSSLELLLAQ 316
Query: 123 RHSI--LVADLEEK----------GKDH-----------------------------RAQ 141
++ L A E++ G D+ R
Sbjct: 317 DRAVWRLSATGEDRKVIANTTGASGLDYMYSRGLLFWSDMKTRKVHSESLNLGNVVPRKV 376
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
DI ++G +A DW+G +Y DS + +++V + +G ++ N+T P + LDP
Sbjct: 377 DISMAGSWGPVSIAVDWVGDKLYVADSIVQKVDVFELDGRYHGIVVGSNLTNPADIALDP 436
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
+ G ++ ++ ++ R MDG+N ++S Y +G+ +DI +R+Y+ DS LD+
Sbjct: 437 TRGLMFI-----ADSKQVLRTNMDGTNAFPVVSEAAYKVSGVAVDIIAKRIYWCDSLLDY 491
Query: 262 IDC------------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL 309
I+ + ++ + + + ++YW D V + + K D S S+
Sbjct: 492 IETTDYRGRNRVMILRGPQVPSPIRLTLFENRIYWSDSTKQAV-MSVDKTQGDYSIQSVF 550
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 158/376 (42%), Gaps = 85/376 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE--CKHKFGLCSNTCHP-TPLGALCTCPPGEI 60
+C+ K+CD DC + +DE GC + + G C++ CH T G +C C PG I
Sbjct: 3899 KCIERQKLCDLANDCGDLSDE-LGCHHNQHCLETDRGGCAHQCHNITDGGYICACYPGYI 3957
Query: 61 LSNDSVT-CQDMNECEQPGY-CSQMCTNTKGSYICSCNEGYVLEYDNHT--CKAINHSAA 116
+S D+ C D++EC+ + CS +CTN GSY CSC +G+ L D H+ C+ +
Sbjct: 3958 ISPDNRKHCVDIDECQTGQHQCSHICTNLNGSYACSCRQGFQLS-DGHSGVCRVEDDDVV 4016
Query: 117 FL-------------------IISNRHSILVADLEEKG---------------------- 135
L +IS+ + D + K
Sbjct: 4017 VLFANGPEVRAYGLHTNEEMDVISDEKKVQAIDFDPKAEYVFWIDSYDNTIKRSYMVNAK 4076
Query: 136 ----KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD------SRLNRIEVCDENGTNRIV 185
K AQD+ + LA DWI ++YW + + RI V +G R
Sbjct: 4077 KGEAKIGYAQDLNMKTESKPTSLAVDWISDNLYWSELDETGATSHGRIMVSKSDGRYRRS 4136
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
L N+ QP + +DP G L W D G P+IE MDG R ++S +I P+ LT+
Sbjct: 4137 LVTVNLEQPTSVAVDPERGE--LLWADAGSQPKIEIAWMDGDRRQMLVSERIANPSALTI 4194
Query: 246 DIATRR-VYFADSKLDFIDCKSL------------EIKTNVNYSTIFRKLYWI------- 285
D A +Y++DSKLD I+ SL +K V LYW
Sbjct: 4195 DYAMEHTLYWSDSKLDTIEAISLTGTNRRVVLKGRSLKNPVALDVFENNLYWTTRQTGEL 4254
Query: 286 ---DEGGNGVPLKIGK 298
D+ G GVP I K
Sbjct: 4255 IRQDKFGRGVPNVIVK 4270
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 78/126 (61%), Gaps = 6/126 (4%)
Query: 141 QDIVVSGL--DLVEGLAYDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRG 196
Q ++ G+ + + GLA DWI G++Y+ + N +EVC +G+NR VL K PR
Sbjct: 2074 QQVIKQGIGSNGIRGLAVDWIAGNLYFANVFPHDNYVEVCRLDGSNRKVLVKTTTDAPRE 2133
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ ++P R+L+W D+G+ PRI + +DGSN S I+++ I P LT+D AT +Y+ D
Sbjct: 2134 LAVNPI--KRYLYWIDYGQYPRIGKAYLDGSNWSPIVTSGISTPRDLTIDPATHDIYWVD 2191
Query: 257 SKLDFI 262
SKLD I
Sbjct: 2192 SKLDTI 2197
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 167/424 (39%), Gaps = 88/424 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT---CPPGEI 60
+C+ CDG+ DC + +DE C K NT P P +C C ++
Sbjct: 2991 KCIRKQFRCDGQDDCGDHSDE------VGCPSKG---KNTTCPNPKDFMCANGNCIDSQL 3041
Query: 61 LSNDSVTCQD---------MNECE--QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
+ N C D ++EC + C C +T S+ C CN GY L D C+
Sbjct: 3042 VCNKEPDCADESDEPLHCNVDECARIELNQCGHKCVDTPTSFYCECNPGYKLLDDGKACE 3101
Query: 110 AINHSAAFLII-----SNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIY 164
I+ + N E+ + A + D ++ WI I+
Sbjct: 3102 DIDECIETPQVCSQQCENTPGSYYCKCNERWYEREADEHTCKRRDNIQ----PWI---IF 3154
Query: 165 WLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGM 224
+ + + + N ++ +D I + LD + L++ D I R +
Sbjct: 3155 TNKYYVRNMSI---DARNYSLMHQDLINV---VALDADYTEQMLYFCDVTAK-TIYRAPI 3207
Query: 225 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYW 284
+G R II G+ +D + RKLYW
Sbjct: 3208 NGGEREAIIRHDSLGLEGIAIDW------------------------------VGRKLYW 3237
Query: 285 IDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWG 344
+D + + + +DG+N L SG + + A+ + G T +LF+T W
Sbjct: 3238 LDRHAKHLDV----SELDGTNRKTLQSG-IADPRAIAVHPG---------TGYLFFTSWH 3283
Query: 345 ENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
I ++GMDGSN + I++ I WPN LT+D T R+++AD+ LD+I F + +G R
Sbjct: 3284 LQAYIGKMGMDGSNFTRILTWEDDIAWPNALTIDYFTDRIFWADAHLDYIAFADLEGHNR 3343
Query: 403 QQVI 406
+ V+
Sbjct: 3344 RIVL 3347
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 91/185 (49%), Gaps = 42/185 (22%)
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EG++YDW +YW DS N I D +G+N +++A+ + +PR +++DP G+ L++T
Sbjct: 2404 EGISYDWTQKKVYWTDSSNNSIYAMDIDGSNLVMIAR--VDRPRAIVVDPCNGS--LYFT 2459
Query: 212 DWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
DWG + ++ + M GS + II + P+GL +D R
Sbjct: 2460 DWGRFGTSGKVFKTTMGGSLKRAIIDKDLSQPSGLAIDYDDR------------------ 2501
Query: 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLY 328
LYW D V KI +++++G+N ILVS +Y A+ + G +Y
Sbjct: 2502 ------------MLYWTD----AVREKIERSDLEGNNREILVSATIY-PFAITVFRGHIY 2544
Query: 329 YSTLK 333
++ L+
Sbjct: 2545 WTDLQ 2549
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 71/127 (55%), Gaps = 4/127 (3%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDP 201
++ S + VEGLA DW ++Y++DSR + V N T R L K N+ +PR +++ P
Sbjct: 691 VLASQNEGVEGLAVDWAAKNLYYIDSRKGTLNVLSTRNVTYRRTLLK-NLKRPRAIVIHP 749
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
+ G ++F+++W I R DGSN + + WPNGL +D R+Y+ D+ LD
Sbjct: 750 NHG--YIFFSEWDRPANISRAHADGSNLVVFQNLTLGWPNGLAIDFNKDRLYWCDALLDH 807
Query: 262 IDCKSLE 268
+ +L+
Sbjct: 808 VQHSNLD 814
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 45/201 (22%)
Query: 207 WLFWTDWGEN--PRIERIGMDGSNRSTIISTKI--YWPNGLTLDIATRRVYFADSKLDFI 262
W++W ++ I RI +G+ +I I GL +D +YFA+
Sbjct: 2049 WIYWVEFNRGIWNGIFRIRPNGTELQQVIKQGIGSNGIRGLAVDWIAGNLYFAN------ 2102
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+ + NY + R +DGSN +LV L +
Sbjct: 2103 ------VFPHDNYVEVCR--------------------LDGSNRKVLVKTTTDAPRELAV 2136
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
R+L+W D+G+ PRI + +DGSN S I+++ I P LT+D AT +
Sbjct: 2137 N---------PIKRYLYWIDYGQYPRIGKAYLDGSNWSPIVTSGISTPRDLTIDPATHDI 2187
Query: 383 YFADSKLDFIDFCNYDGTGRQ 403
Y+ DSKLD I +Y G GR+
Sbjct: 2188 YWVDSKLDTIQKVSYTGGGRE 2208
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 110/251 (43%), Gaps = 57/251 (22%)
Query: 196 GMMLDPSPGTRWLFWTDWG----ENPRIERIGMDGSNRSTIISTK-----IYWPNGLTLD 246
G +D R ++W EN + I +G NR+ + + + P+ + LD
Sbjct: 1715 GRFIDYDRNNRVIYWLQGKDGDDENGTVYTIPYNGGNRTEFPNPEGDSGIVGSPSTMALD 1774
Query: 247 IATRRVYFA------------DSKLDFIDCKSLEIKTNVNYSTIFR-----------KLY 283
R ++ DSK+ F +++ + + N +++ + +++
Sbjct: 1775 WLGRNLFIGNKFASNIEAIKLDSKMRF---RTIILANDGNRTSVSKPKAMCVDPIDGQVF 1831
Query: 284 WIDEGGNGVPLKIGKANMDGSNASILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTD 342
W+DEGG GVP KIG+ NMDGSN +LV + EA+ +D+ + LY+S
Sbjct: 1832 WVDEGGFGVPQKIGRVNMDGSNPLVLVENLERPEAITIDIPSKTLYFSC----------- 1880
Query: 343 WGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS---KLDFIDFCNYD 398
+NP I+ + DG N TI++ L + R+Y+ D K++ +D N
Sbjct: 1881 --QNPAFIKAMSTDGLNVRTILTAANNLALPKALAVHDSRLYYLDPLYDKIERVDLPN-- 1936
Query: 399 GTGRQQVILID 409
G V LID
Sbjct: 1937 --GDNPVTLID 1945
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 88/199 (44%), Gaps = 27/199 (13%)
Query: 221 RIGMDGSNRSTIISTK------IYWPNGLTL--DIATRRVYFADSKLDFIDCKSLEIKTN 272
R+ G +R I +T + GL D+ TR+V+ L + + ++I
Sbjct: 322 RLSATGEDRKVIANTTGASGLDYMYSRGLLFWSDMKTRKVHSESLNLGNVVPRKVDISMA 381
Query: 273 VNYSTIFRKLYWIDEG---GNGVPLKIGKANMDGSNASILVSGQLYEA--LALDLENGML 327
++ + + W+ + + + K+ +DG I+V L +ALD G++
Sbjct: 382 GSWGPVSIAVDWVGDKLYVADSIVQKVDVFELDGRYHGIVVGSNLTNPADIALDPTRGLM 441
Query: 328 YYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 387
+ + K ++ R MDG+N ++S Y +G+ +DI +R+Y+ DS
Sbjct: 442 FIADSK--------------QVLRTNMDGTNAFPVVSEAAYKVSGVAVDIIAKRIYWCDS 487
Query: 388 KLDFIDFCNYDGTGRQQVI 406
LD+I+ +Y G R ++
Sbjct: 488 LLDYIETTDYRGRNRVMIL 506
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 86/213 (40%), Gaps = 44/213 (20%)
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
+ R + LD ++++++D ++ I R+ + + R +++++ GL +D A + +
Sbjct: 653 RARFVGLDYDAHDQYIYYSDVLQD-VIYRVHQNATGREIVLASQNEGVEGLAVDWAAKNL 711
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+ DS+ ++ S NV Y K N+ A ++
Sbjct: 712 YYIDSRKGTLNVLSTR---NVTYRRTLLK------------------NLKRPRAIVIHPN 750
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
Y +F+++W I R DGSN + + WPNG
Sbjct: 751 HGY----------------------IFFSEWDRPANISRAHADGSNLVVFQNLTLGWPNG 788
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
L +D R+Y+ D+ LD + N DGT + V
Sbjct: 789 LAIDFNKDRLYWCDALLDHVQHSNLDGTDVRTV 821
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 30/205 (14%)
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFR------ 280
S+ T+IS I P G++ D ++VY+ DS + I ++ V + + R
Sbjct: 2391 SDLHTLISKGIN-PEGISYDWTQKKVYWTDSSNNSIYAMDIDGSNLVMIARVDRPRAIVV 2449
Query: 281 -----KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLK 333
LY+ D G G K+ K M GS ++ L + LA+D ++ MLY
Sbjct: 2450 DPCNGSLYFTDWGRFGTSGKVFKTTMGGSLKRAIIDKDLSQPSGLAIDYDDRMLY----- 2504
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
WTD +IER ++G+NR ++S IY + + +Y+ D +L +
Sbjct: 2505 ------WTD-AVREKIERSDLEGNNREILVSATIY---PFAITVFRGHIYWTDLQLRGV- 2553
Query: 394 FCNYDGTGRQQVILIDLMVEFTNDL 418
+ TG ++ L+ + + DL
Sbjct: 2554 YRAEKHTGADKIELVKRLEDSPRDL 2578
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 120/319 (37%), Gaps = 62/319 (19%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G C Q+C + G+ +C+C +EY F +++ L K
Sbjct: 1971 GGCEQICLPASGGTRVCACG----IEYRKVADGKCEPYKTFAVVTQLDVARGYSL----K 2022
Query: 137 DHRAQDIVVSGL-DLVEGLAYDWIGGHIYWLDSRL---NRIEVCDENGTNRIVLAKDNIT 192
D + + ++G+ + + + G IYW++ N I NGT + K I
Sbjct: 2023 DSKEAMVPIAGVGHHILHVDVHYAGNWIYWVEFNRGIWNGIFRIRPNGTELQQVIKQGIG 2082
Query: 193 QP--RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
RG+ +D G + F + + +E +DGSNR ++ T P L ++
Sbjct: 2083 SNGIRGLAVDWIAGNLY-FANVFPHDNYVEVCRLDGSNRKVLVKTTTDAPRELAVN---- 2137
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
I R LYWID G +IGKA +DGSN S +V
Sbjct: 2138 --------------------------PIKRYLYWIDYGQYP---RIGKAYLDGSNWSPIV 2168
Query: 311 SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 370
+ + L ++ T ++W D + I+++ G R I + P
Sbjct: 2169 TSGISTPRDLTIDPA---------THDIYWVD-SKLDTIQKVSYTGGGREII---RRNLP 2215
Query: 371 NGLTLDIATRRVYFADSKL 389
N + + I VY+ D L
Sbjct: 2216 NPMGVAIFIGDVYWVDRNL 2234
>gi|332024241|gb|EGI64445.1| Low-density lipoprotein receptor-related protein 2 [Acromyrmex
echinatior]
Length = 4558
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/377 (56%), Positives = 250/377 (66%), Gaps = 55/377 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V +RCVN T VCDGK DCPNGADEGPGCD AEC H+ GLC+N C TP GA C CP GE
Sbjct: 1278 VKNRCVNTTSVCDGKLDCPNGADEGPGCDTAECHHQDGLCTNGCIQTPFGAQCICPAGEE 1337
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
L NDS TCQD+NEC+ G CSQ+C NTKGSY CSC GY L+ D HTCKA NHSAAFLII
Sbjct: 1338 L-NDSFTCQDINECDPDGRCSQLCKNTKGSYYCSCVNGYTLDADKHTCKAFNHSAAFLII 1396
Query: 121 SNRHSILVADLEEKG-------------------------------------KDHRAQDI 143
SNRH+ILVADL+++ + QDI
Sbjct: 1397 SNRHTILVADLQDQALERVPINVENVVATASNMHTGTIFWSDMKLKRISRLDRGSDPQDI 1456
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ +GLDLVEGLAYDWIG ++YWLDS+LN IEV E G R++L K+NITQPRGM LDPS
Sbjct: 1457 ISTGLDLVEGLAYDWIGQNLYWLDSKLNTIEVAKETGVGRMILVKENITQPRGMCLDPSE 1516
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G RWLFWTDWGENPRIERIGMDG+NRSTIISTKIYWPNGL LDIA RR+YFADSKLDFID
Sbjct: 1517 GARWLFWTDWGENPRIERIGMDGTNRSTIISTKIYWPNGLALDIANRRIYFADSKLDFID 1576
Query: 264 -CK-----SLEIKTNVNY------STIFR-KLYWIDEGGNGVPLKIGKANMDGSNASILV 310
CK L++ + +Y T+F +YW D N V + GSN ++ V
Sbjct: 1577 TCKYDGSQRLQVLASSHYLLHPHSLTLFEDTMYWTDRQLNRV---LSAHKFKGSNQTV-V 1632
Query: 311 SGQLYEALALDLENGML 327
S + + L++ + + +L
Sbjct: 1633 SHLISQPLSIHVHHAVL 1649
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 148/307 (48%), Gaps = 46/307 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++ VC+ + DC + +DE C++ EC + C C TP C C PG L
Sbjct: 3051 CIDSQLVCNKEPDCADESDEPLHCNVDECARVEINQCGQKCVDTPTSFYCECNPGYKLLA 3110
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEG-YVLEYDNHTCKAINHSAAFLIIS 121
D C D++EC E P CSQ C NT G Y C CNE Y E D HTCK ++ +++ +
Sbjct: 3111 DGKACDDIDECIETPQVCSQQCENTPGGYYCKCNERWYEREADEHTCKRRDNVQPWIVFT 3170
Query: 122 NRHSILVADLEEKGKDHRAQDIV-VSGLDL------------------------------ 150
N++ + ++ QD++ V LD
Sbjct: 3171 NKYYVRNMSIDASQYSLMHQDLINVVALDADYAQQMLYFCDVTAKTIYRAPVNGGEREPI 3230
Query: 151 -------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+EG+A DW+G +YWLD ++V + +GTNR L + I PR + + P
Sbjct: 3231 IRHDSLGLEGIAIDWVGRKLYWLDRHAKHLDVAELDGTNRKTL-QSGIADPRAIAVHPGA 3289
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L++T W I ++GMDGSN + I++ I WPN LT+D T R+++AD+ LD+
Sbjct: 3290 G--YLYFTSWHLQAYIGKMGMDGSNFTRILTWEDDIAWPNALTIDYFTDRIFWADAHLDY 3347
Query: 262 IDCKSLE 268
I LE
Sbjct: 3348 IAFADLE 3354
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 173/358 (48%), Gaps = 62/358 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+N +++CDGK DC +GADE C + C G C + C +P G +C CP G IL+ND
Sbjct: 223 CINRSQLCDGKQDCEDGADEEAACSTSMCG-SLG-CQHKCQASPTGGICYCPEGRILAND 280
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS--- 121
S TC D +EC + G+C Q+C NT G Y C C GY+L N C+A N S+ L+++
Sbjct: 281 SRTCVDRDECFEWGFCEQLCENTDGWYTCYCAPGYILHGVN-KCRAQNTSSLELLLAQDR 339
Query: 122 ----------------------------NRHSILVADLEEK---------GKDHRAQ-DI 143
+R+ + +D++ + G D A+ DI
Sbjct: 340 AIWRLSSTAEDRRIIANATGASGVDYLYSRNLVFWSDMKTRKVHSESLNLGSDTPAKVDI 399
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
++G +A DWIG +Y DS + +++V + +G ++ N+T P + LDP+
Sbjct: 400 SMAGSWGPVSIAIDWIGEKLYVADSIVQKVDVFELDGRYHGIVVGSNLTNPTDIALDPTK 459
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G ++ ++ ++ R MDG+N ++S Y +G+ +DI +R+Y+ DS LD+I+
Sbjct: 460 GLMFI-----ADSKQVLRTNMDGTNAFPVVSQAAYKVSGVAVDIIAKRIYWCDSLLDYIE 514
Query: 264 C------------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL 309
+ ++ + + + +++W D V + + K D S S+
Sbjct: 515 TADYRGHNRVMILRGSQVPSAIRLTLFENRIFWTDSTKQAV-MSVDKTQGDYSIQSVF 571
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 166/376 (44%), Gaps = 85/376 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE--CKHKFGLCSNTCHP-TPLGALCTCPPGEI 60
+C++ K+CD DC + +DE GC + + G C++ CH + G +CTC PG I
Sbjct: 3915 KCIDHLKLCDLADDCGDLSDE-LGCHHSHHCSDNDRGGCAHVCHNLSDSGYICTCYPGYI 3973
Query: 61 LSNDSVT-CQDMNECEQPGY-CSQMCTNTKGSYICSCNEGYVLEYDNHT--CKAINHSAA 116
+S D+ C D++EC+ + CS +CTN G+Y CSC G+ L D H+ C+A + +
Sbjct: 3974 ISQDNRKHCVDVDECQTGNHQCSHICTNLNGTYACSCRHGFQLS-DRHSGVCRAEDDNVV 4032
Query: 117 FL-------------------IISN--------------------------RHSILVADL 131
L +I N + S +V
Sbjct: 4033 VLFANGPELRAYDLRTREEMDVIDNEKRVEAIDFDPRTEYVFWIDSYDNTIKRSYMVNAK 4092
Query: 132 EEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD------SRLNRIEVCDENGTNRIV 185
E + K AQD+ + LA DWI G++YW + + +I V +G R
Sbjct: 4093 EGEAKIGHAQDLNMKTDSRPTSLAVDWISGNLYWSEIDQSGTTPRGQIMVAKSDGRYRRS 4152
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
L N+ QP +++DP G + W D G P+IE MDG+ R ++++ +I P+ LT+
Sbjct: 4153 LITTNLEQPTAVVVDPERGE--VVWADSGNQPKIEIAWMDGARRKSLVTERIASPSSLTI 4210
Query: 246 DIATRR-VYFADSKLDFIDCKSLE------------IKTNVNYSTIFRKLYWI------- 285
D A +Y++DSKLD I+ SL +K + LYW
Sbjct: 4211 DYAMEHTLYWSDSKLDTIEAISLAGTNRRTVLKGRLLKNPIALDVFENNLYWTTKQTGEL 4270
Query: 286 ---DEGGNGVPLKIGK 298
D+ G GVP I K
Sbjct: 4271 IRQDKFGRGVPHIIIK 4286
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 79/126 (62%), Gaps = 6/126 (4%)
Query: 141 QDIVVSGL--DLVEGLAYDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRG 196
Q I+ G+ + + GLA DWI G++Y+ + N +EVC +G+NR VL K PR
Sbjct: 2090 QQIIKQGIGSNGIRGLAVDWIAGNLYFANVFPHDNYVEVCWLDGSNRKVLVKMTTDAPRE 2149
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ ++P R+L+W D+G+ PRI + +DGSN S I+++ I P LT+D+AT VY+ D
Sbjct: 2150 LAVNPI--KRYLYWIDYGQYPRIGKAFLDGSNWSPIVTSGISTPRDLTIDLATHDVYWVD 2207
Query: 257 SKLDFI 262
SKLD I
Sbjct: 2208 SKLDTI 2213
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 170/433 (39%), Gaps = 106/433 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT---CPPGEI 60
+C+ CDG+ DC + +DE C K NT P P +C C ++
Sbjct: 3006 KCIRKQFRCDGQDDCGDHSDE------VGCPSKG---KNTTCPNPKDFMCANGNCIDSQL 3056
Query: 61 LSNDSVTCQD---------MNECE--QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
+ N C D ++EC + C Q C +T S+ C CN GY L D C
Sbjct: 3057 VCNKEPDCADESDEPLHCNVDECARVEINQCGQKCVDTPTSFYCECNPGYKLLADGKACD 3116
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I D + + + GG+ + R
Sbjct: 3117 DI------------------------------DECIETPQVCSQQCENTPGGYYCKCNER 3146
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
E DE+ R +DN+ QP W+ +T+ + + +D S
Sbjct: 3147 WYEREA-DEHTCKR----RDNV-QP------------WIVFTN---KYYVRNMSIDASQY 3185
Query: 230 STIISTKIYWPNGLTLDIATRRVYFAD--------------SKLDFIDCKSLEIKTNVNY 275
S ++ + L D A + +YF D + I SL ++ +
Sbjct: 3186 S-LMHQDLINVVALDADYAQQMLYFCDVTAKTIYRAPVNGGEREPIIRHDSLGLE-GIAI 3243
Query: 276 STIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCT 335
+ RKLYW+D + + A +DG+N L SG + + A+ + G Y
Sbjct: 3244 DWVGRKLYWLDRHAKHLDV----AELDGTNRKTLQSG-IADPRAIAVHPGAGY------- 3291
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDFID 393
L++T W I ++GMDGSN + I++ I WPN LT+D T R+++AD+ LD+I
Sbjct: 3292 --LYFTSWHLQAYIGKMGMDGSNFTRILTWEDDIAWPNALTIDYFTDRIFWADAHLDYIA 3349
Query: 394 FCNYDGTGRQQVI 406
F + +G R+ V+
Sbjct: 3350 FADLEGHNRRIVL 3362
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 42/185 (22%)
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EG++YDW +YW DS N I D +G+N +++A+ + +PR +++DP G+ L++T
Sbjct: 2419 EGISYDWTQKKVYWTDSSNNSIYAMDIDGSNLVMIAR--VDRPRAIVVDPCNGS--LYFT 2474
Query: 212 DWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
DWG + +I + M GS + TII + P+GL +D R
Sbjct: 2475 DWGRFGTSGKIFKTTMAGSLKRTIIDKDLSQPSGLAIDYEDR------------------ 2516
Query: 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLY 328
LYW D V KI +++++G + ILVS +Y A+ + +Y
Sbjct: 2517 ------------MLYWTD----AVREKIERSDLEGKHREILVSATIY-PFAITVYKEHIY 2559
Query: 329 YSTLK 333
++ L+
Sbjct: 2560 WTDLQ 2564
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 139/347 (40%), Gaps = 64/347 (18%)
Query: 80 CSQMC---TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
C +C N KG Y C C G+ L D + + +L++ I+ L K
Sbjct: 1662 CEHLCLLSPNPKG-YSCKCQVGFKLLSDG---RCMEEETPYLMVLRGSQIIDVSLTPK-- 1715
Query: 137 DHRAQDIVVSGLDLVEG---LAYDWIGGHIYWLDSRLN-----RIEVCDENGTNRIVLAK 188
+ ++ + VEG + YD IYWL S+ + I V NG NR
Sbjct: 1716 --ETKTGYITPIVGVEGGRFIEYDRRDRTIYWLQSKDSDNENGTIYVTPYNGGNRTEFPN 1773
Query: 189 DN-----ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ + P M LD G + N IE I +DG R I
Sbjct: 1774 PSGDTGIVGSPSTMALD-WLGRNMFIGNKFASN--IEAIKLDGKTRFRTI---------- 1820
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
L R + K +D I +++W+D+GG GVP KIG+ NMDG
Sbjct: 1821 VLSNDGNRTSVSKPKAMCVD-------------PIDGQVFWVDDGGFGVPQKIGRVNMDG 1867
Query: 304 SNASILV-SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
SN +LV S + EA+ +D+ + LY+S C +F I+ + DG N TI
Sbjct: 1868 SNPLVLVESLERPEAITIDIPSKTLYFS---CKNPVF---------IKSMSTDGQNIRTI 1915
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
++ + + R+Y+ DS D I+ + G VI+ID
Sbjct: 1916 LTAANNIAMPKAIAVHESRLYYLDSLFDKIERVDL-SNGDNPVIIID 1961
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 102/246 (41%), Gaps = 64/246 (26%)
Query: 78 GYCSQMCTNTKGS-------YICSCNEGYVLEYDNHTCKAINH----------------- 113
G C MC T S Y C+C+ G+ L D C +
Sbjct: 599 GGCQHMCIVTASSDQNNRLGYRCACHIGWRLAGDMRNCNLVQEFLMYSQQRFIKGRVLNP 658
Query: 114 -----SAAFLIISNRHSILVADLEEKGKDHRAQD-------------------------I 143
S A L +++R + V G D+ A D +
Sbjct: 659 VMEGFSDAILPVASRRARFV------GLDYDAHDQYIYYSDVLQDVIYRVHQNATGREIV 712
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPS 202
+ S + VEGLA DW ++Y++DSR + V N T R L K N+ +PR +++ P+
Sbjct: 713 LASQNEGVEGLAVDWAAKNLYYIDSRKGTLNVLSTRNVTYRRTLVK-NLKRPRAIVIHPN 771
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G ++F+++W I R DGSN + + WPNGL +D R+Y+ D+ LD +
Sbjct: 772 QG--YIFFSEWDRPANISRSHADGSNVVVFRNLTLGWPNGLAIDFTEDRLYWCDALLDNV 829
Query: 263 DCKSLE 268
+L+
Sbjct: 830 QHSNLD 835
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 10/106 (9%)
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGSN +LV + D L + +K R+L+W D+G+ PRI + +DGSN S
Sbjct: 2131 LDGSNRKVLVK------MTTDAPR-ELAVNPIK--RYLYWIDYGQYPRIGKAFLDGSNWS 2181
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I+++ I P LT+D+AT VY+ DSKLD I +Y G G Q++I
Sbjct: 2182 PIVTSGISTPRDLTIDLATHDVYWVDSKLDTIQKVSYTG-GNQEII 2226
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
++Y +K+YW D N I ++DGSN ++ A+ +D NG LY++
Sbjct: 2421 ISYDWTQKKVYWTDSSNNS----IYAMDIDGSNLVMIARVDRPRAIVVDPCNGSLYFTD- 2475
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
W +G + +I + M GS + TII + P+GL +D R +Y+ D+ + I
Sbjct: 2476 -------WGRFGTSGKIFKTTMAGSLKRTIIDKDLSQPSGLAIDYEDRMLYWTDAVREKI 2528
Query: 393 DFCNYDGTGRQQVI 406
+ + +G R+ ++
Sbjct: 2529 ERSDLEGKHREILV 2542
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 246 DIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG---GNGVPLKIGKANMD 302
D+ TR+V+ L ++I ++ + + WI E + + K+ +D
Sbjct: 376 DMKTRKVHSESLNLGSDTPAKVDISMAGSWGPVSIAIDWIGEKLYVADSIVQKVDVFELD 435
Query: 303 GSNASILVSGQLYEA--LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
G I+V L +ALD G+++ + K ++ R MDG+N
Sbjct: 436 GRYHGIVVGSNLTNPTDIALDPTKGLMFIADSK--------------QVLRTNMDGTNAF 481
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
++S Y +G+ +DI +R+Y+ DS LD+I+ +Y G R ++
Sbjct: 482 PVVSQAAYKVSGVAVDIIAKRIYWCDSLLDYIETADYRGHNRVMIL 527
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 86/213 (40%), Gaps = 44/213 (20%)
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
+ R + LD ++++++D ++ I R+ + + R +++++ GL +D A + +
Sbjct: 674 RARFVGLDYDAHDQYIYYSDVLQD-VIYRVHQNATGREIVLASQNEGVEGLAVDWAAKNL 732
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+ DS+ ++ S NV Y K N+ A ++
Sbjct: 733 YYIDSRKGTLNVLSTR---NVTYRRTLVK------------------NLKRPRAIVIHPN 771
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
Q Y +F+++W I R DGSN + + WPNG
Sbjct: 772 QGY----------------------IFFSEWDRPANISRSHADGSNVVVFRNLTLGWPNG 809
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
L +D R+Y+ D+ LD + N DG + V
Sbjct: 810 LAIDFTEDRLYWCDALLDNVQHSNLDGMDVRTV 842
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 30/205 (14%)
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFR------ 280
S+ T+IS I P G++ D ++VY+ DS + I ++ V + + R
Sbjct: 2406 SDLHTLISKGIN-PEGISYDWTQKKVYWTDSSNNSIYAMDIDGSNLVMIARVDRPRAIVV 2464
Query: 281 -----KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLK 333
LY+ D G G KI K M GS ++ L + LA+D E+ MLY
Sbjct: 2465 DPCNGSLYFTDWGRFGTSGKIFKTTMAGSLKRTIIDKDLSQPSGLAIDYEDRMLY----- 2519
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
WTD +IER ++G +R ++S IY P +T + +Y+ D +L +
Sbjct: 2520 ------WTD-AVREKIERSDLEGKHREILVSATIY-PFAIT--VYKEHIYWTDLQLRGV- 2568
Query: 394 FCNYDGTGRQQVILIDLMVEFTNDL 418
+ TG ++ L + + DL
Sbjct: 2569 YRAEKHTGADKIELAKRLEDSPRDL 2593
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 121/321 (37%), Gaps = 66/321 (20%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G C Q+C + G+ +C+C +EY T F +++ L K
Sbjct: 1987 GGCEQLCLPASGGTRVCACG----MEYKKVTETRCEPYKTFAVVTQLDVARGYSL----K 2038
Query: 137 DHRAQDIVVSGL-DLVEGLAYDWIGGHIYWLDSRL---NRIEVCDENGTNRIVLAKDNIT 192
D + I ++G + + + G IYW++ N I NGT + K I
Sbjct: 2039 DSKEAMIPITGPGHHILHVDVHYAGNWIYWVEFNRGFWNGIFRIRPNGTELQQIIKQGIG 2098
Query: 193 QP--RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
RG+ +D G + F + + +E +DGSNR ++ P L ++
Sbjct: 2099 SNGIRGLAVDWIAGNLY-FANVFPHDNYVEVCWLDGSNRKVLVKMTTDAPRELAVN---- 2153
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
I R LYWID G +IGKA +DGSN S +V
Sbjct: 2154 --------------------------PIKRYLYWIDYGQYP---RIGKAFLDGSNWSPIV 2184
Query: 311 SGQLYEA--LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY 368
+ + L +DL T ++W D + I+++ G N+ I +
Sbjct: 2185 TSGISTPRDLTIDLA-----------THDVYWVD-SKLDTIQKVSYTGGNQEII---RRN 2229
Query: 369 WPNGLTLDIATRRVYFADSKL 389
PN + + I VY+ D L
Sbjct: 2230 VPNPMGVAIFGGDVYWVDRNL 2250
>gi|198471567|ref|XP_001355664.2| GA11430 [Drosophila pseudoobscura pseudoobscura]
gi|198145975|gb|EAL32723.2| GA11430 [Drosophila pseudoobscura pseudoobscura]
Length = 4543
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/377 (54%), Positives = 249/377 (66%), Gaps = 54/377 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V++RCVN+T VCD DCPNGADEG GCDLAEC+H+ G CS+ C TP GALC CPPG
Sbjct: 1221 VSERCVNITSVCDDTPDCPNGADEGEGCDLAECEHQTGQCSSFCQKTPNGALCVCPPGSE 1280
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
+ +D TC D NEC+ PG CSQ CTNTKGSY CSC +GYVLE + HTCKA+NH+AAFLII
Sbjct: 1281 IGDDGFTCNDTNECDPPGLCSQQCTNTKGSYFCSCQDGYVLEPNKHTCKAVNHTAAFLII 1340
Query: 121 SNRHSILVADLEEKG-------------------------------------KDHRAQDI 143
SNRHSILVADL+E+G + Q+I
Sbjct: 1341 SNRHSILVADLKEQGLERVPIIVENVVATASNMHTGTIFWSDMKLKKISRLDRGMEPQEI 1400
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ +GLDLVEGLAYDWI ++YWLDS+LN IEV ENG+NR+VL ++NITQPRGM +DPSP
Sbjct: 1401 INTGLDLVEGLAYDWIAQNLYWLDSKLNTIEVSAENGSNRLVLVRENITQPRGMCIDPSP 1460
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G RW+FWTDWGENPR+ERIGMDG+ R TII+TKIYWPNGLTLDIAT+RVYFADSKLDFID
Sbjct: 1461 GARWIFWTDWGENPRVERIGMDGTMRKTIINTKIYWPNGLTLDIATKRVYFADSKLDFID 1520
Query: 264 ------CKSLEIKTNVNY-------STIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
++ + +Y S LYW D N V + G N ++ V
Sbjct: 1521 FCYYNGTGRQQVLASSHYLLHPHSLSLFEDTLYWTDRQLNRV---LSANKFRGKNQTV-V 1576
Query: 311 SGQLYEALALDLENGML 327
S + + L++ + + L
Sbjct: 1577 SHLISQPLSIHVHHASL 1593
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 154/314 (49%), Gaps = 52/314 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C++ + VC+ DC + +DE C++ EC K + C + C T C C G L
Sbjct: 2995 QCIDYSLVCNKYPDCSDESDEPAHCNVDECAKVEINQCGHKCVDTLTSYYCDCNEGYKLL 3054
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYV-LEYDNHTCKAINHSAAFLII 120
D C D++EC EQPG CSQ C+NT GS+ C C+E Y + D HTCK ++ +LI
Sbjct: 3055 ADGKACADVDECLEQPGACSQHCSNTPGSFYCKCDETYYERQNDEHTCKRKDNIPPWLIF 3114
Query: 121 SNRHSILVADLEEKGKDHRAQDIV-VSGLDL----------------------------- 150
+N++ + ++ + QD++ V LD
Sbjct: 3115 TNKYYVRNMSVDGHQYNLMHQDLMNVVALDFDIREEYMYFCDVTAKTIFRAKYTGPEDET 3174
Query: 151 --------------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+EG+A DW+G +YWLD ++V + +GT R L + + PR
Sbjct: 3175 PPEREAVIRHDSHGLEGIAIDWVGRKLYWLDRHSKNLDVSELDGTKRKTL-RSGVVDPRA 3233
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYF 254
+++ PG +L++T W I ++GMDGSN + I+ + I WPN L++D T R+Y+
Sbjct: 3234 IVV--HPGIGYLYFTSWHLQAYIAKMGMDGSNFTRILNWNDGIAWPNALSIDYFTDRIYW 3291
Query: 255 ADSKLDFIDCKSLE 268
AD+ LD+I LE
Sbjct: 3292 ADAHLDYIAYADLE 3305
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 131/516 (25%), Positives = 224/516 (43%), Gaps = 88/516 (17%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
A +C+ +++CDGK DC +G+DE C +A C C C P+ G +C C PG+ L
Sbjct: 161 APKCILKSQLCDGKRDCEDGSDEETNCSIASCPALS--CEFKCGPSLTGGVCYCRPGQSL 218
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVL------------------EY 103
+ D+ TC D++EC + G+C Q+CTNT GSY C C +GY L +
Sbjct: 219 APDNRTCVDLDECAEWGHCDQLCTNTLGSYTCQCAQGYTLINESKCIAPNANNLQLIFAH 278
Query: 104 DNHTCKAINHSAAFLIISN------------RHSILVADLEEKGKDHRAQDIVVSGLDLV 151
D + H A I++N R+++ +D++ + + + GL
Sbjct: 279 DRAIMRMFAHGADPRILANATAAAGVSFHYARNTLYWSDIKTRKVQSLPLNPLNKGLSSF 338
Query: 152 E----------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+ LA DW+G IY D +I+V + +G V+ N+T P + LDP
Sbjct: 339 DQTLPGTWAPVALAVDWVGDKIYVADLVGQKIDVFELSGQWHAVVLGSNLTSPADLALDP 398
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
+ G +F D G+ + R MDG++ +I+S Y +G+T+DI ++RV++ DS LD+
Sbjct: 399 TSGL--MFVADGGQ---VLRAHMDGTHARSIVSEAAYKASGVTVDIISKRVFWCDSLLDY 453
Query: 262 IDC------------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL 309
I+ + ++ + + ++YW D G+ + + K +G +SI
Sbjct: 454 IESVDYEGAHRVMVLRGQQVPSPSRLALFENRIYWTDATKQGI-MSVDK--FEGP-SSIQ 509
Query: 310 VSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYW 369
V+ Y+A + G++ L R NP G G N I++
Sbjct: 510 VT---YKAKDIREPKGIIAVHALSQPRV-------SNPCGNNNG--GCNHMCIVTAVKGA 557
Query: 370 PNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALA- 428
P GL A Y ++ L QQ + ++E + D +P ++
Sbjct: 558 PTGLGFRCACSTGYQLETDLKLCKPVGEFLMYSQQRFIKGKVLEPVIEGFSDAIMPVVSR 617
Query: 429 --------LDLENGMLYYSTEGAEFLKTPLFCITRN 456
D + +YYS + L+ ++ + RN
Sbjct: 618 RARFVGLDFDARDEFIYYS----DVLQDVIYRVHRN 649
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 59/317 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHK-FGLCSNTCHP-TPLGALCTCPPGEIL 61
C+ ++VCD DC + +DE A C + G C + CH T G +CTC PG I+
Sbjct: 3867 HCIERSQVCDFSDDCTDASDELGCHHTASCSEQNRGGCQHHCHNLTDGGYICTCYPGYII 3926
Query: 62 SNDSVT-CQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVL------------------ 101
S+D+ C D++EC + CS C N G+Y CSC EG+ L
Sbjct: 3927 SHDNKKRCADVDECLTRQHTCSHQCHNLNGTYSCSCREGFRLADGASGVCRAEKEDVVLV 3986
Query: 102 ----------------EYD----NHTCKAINHSAAFLII--------SNRHSILVADLEE 133
E+D +A+++ A II + + S +V ++
Sbjct: 3987 FANGQEIRGLDLQKREEFDVIAAEKRIEALDYDAQQQIIFWADSYDKTIKRSYMVNAIDG 4046
Query: 134 KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD------SRLNRIEVCDENGTNRIVLA 187
+ K AQD+ + G +A DW+ ++YW + R+ V +G R +
Sbjct: 4047 RAKIGFAQDLNMKGGSKPTAVAVDWLASNLYWTEMDRTGSKPRGRVMVAKTDGRYRRSIV 4106
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P + ++P G ++W+D G P+IE MDGS R +I+ +I P GLT+D
Sbjct: 4107 NAGLEVPTSIAVNPQLGR--IYWSDAGSAPKIEVSWMDGSKRRPLITEQIRHPAGLTIDY 4164
Query: 248 ATRR-VYFADSKLDFID 263
+ +Y+ D+KL+ I+
Sbjct: 4165 SQDHIIYWVDTKLNAIE 4181
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 96/184 (52%), Gaps = 20/184 (10%)
Query: 141 QDIVVSGL--DLVEGLAYDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRG 196
Q +V G+ + + GL DW+ G++Y+ + N +EV +G+NR VL K PR
Sbjct: 2033 QHVVKDGIGSNGIRGLTIDWVAGNMYFTNVYPHENYVEVSWLDGSNRKVLVKTTNDAPRE 2092
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ +DP R L+W D+G++PRI + +DGS + ++++ I P LT+D+ T +Y+ D
Sbjct: 2093 LAVDPI--KRLLYWIDYGQHPRIGKALLDGSKWTPLVTSGISLPRDLTIDMQTHDIYWVD 2150
Query: 257 SKLDFIDCKSL----------EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
SKLD I S ++ + + + +YW+D + + KA+ +N
Sbjct: 2151 SKLDTIQKISYSGANRKVIRRDLPSPMGIAVYLNDVYWVDRN----LMTVFKASKHNTND 2206
Query: 307 SILV 310
S++
Sbjct: 2207 SVVT 2210
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EG+AYDW IYW DS N I + +GT +++A+ + +PR ++LDP GT LF+T
Sbjct: 2367 EGIAYDWTQHKIYWTDSSNNSIYAMNLDGTELVMIAR--VERPRAIVLDPCNGT--LFFT 2422
Query: 212 DWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
DWG + +I R M GS + I+ + P+GL +D RR+Y+ D+ + I+ LE
Sbjct: 2423 DWGRFGTSGKIFRTTMAGSLKRAIVDKDLSQPSGLAIDYDERRLYWTDAVREKIERSDLE 2482
Query: 269 IK--------TNVNYS-TIFRK-LYWIDEGGNGV 292
+ T ++ T+FR +YW D GV
Sbjct: 2483 GRNRELLVAATIYPFAITVFRNYIYWTDLQLRGV 2516
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 52/240 (21%)
Query: 78 GYCSQMC--TNTKGS-----YICSCNEGYVLEYDNHTCKAINH----------------- 113
G C+ MC T KG+ + C+C+ GY LE D CK +
Sbjct: 543 GGCNHMCIVTAVKGAPTGLGFRCACSTGYQLETDLKLCKPVGEFLMYSQQRFIKGKVLEP 602
Query: 114 ------SAAFLIISNRHSILVADLEEKG--------------KDHR---AQDIVVSGLDL 150
A ++S R + D + + + HR ++IV++ +
Sbjct: 603 VIEGFSDAIMPVVSRRARFVGLDFDARDEFIYYSDVLQDVIYRVHRNGTGREIVLASQNE 662
Query: 151 -VEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
VEGLA DW ++Y++DSR + V N T+R L K N+ +PR +++ P+ G ++
Sbjct: 663 GVEGLAVDWASKNLYYIDSRKGTLNVLSTRNVTHRRTLLK-NLKRPRAIVVHPNRG--FI 719
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
F+++W I R DG+ + + WPNGL++D RVY+ D+ LD + +L+
Sbjct: 720 FFSEWDRPANITRANTDGTGLLVFKNVTLGWPNGLSIDFKEDRVYWCDALLDHVQHANLD 779
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 28/164 (17%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRW 337
+ RKLYW+D + + + +DG+ L SG + + A+ + G+ Y
Sbjct: 3197 VGRKLYWLDRHSKNLDV----SELDGTKRKTLRSG-VVDPRAIVVHPGIGY--------- 3242
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
L++T W I ++GMDGSN + I++ I WPN L++D T R+Y+AD+ LD+I +
Sbjct: 3243 LYFTSWHLQAYIAKMGMDGSNFTRILNWNDGIAWPNALSIDYFTDRIYWADAHLDYIAYA 3302
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYS 439
+ +G R V L G+ AL L + +Y+S
Sbjct: 3303 DLEGRHRHTV------------LSGNRVPHVFALSLFDDFIYWS 3334
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 143/355 (40%), Gaps = 70/355 (19%)
Query: 72 NECEQPGYCSQMC---TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILV 128
N C Q C +C + Y C C G+ L + + I FL++ I+
Sbjct: 1599 NPCAQ-AKCQHLCLLSPSVTEGYSCKCKPGFKLLSEG---RCIEEENPFLMVVKGTQIV- 1653
Query: 129 ADLEEKGKDHRAQDIV-VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD------ENGT 181
DL G D RA + V G++ GL +D G +YW+ R + E C G
Sbjct: 1654 -DLPLNGGDARAGALAPVIGIESSTGLDFDRKGETLYWVQGREDDDENCTIYTTPYGGGN 1712
Query: 182 NRIVLAKDN--ITQPRGMMLDPSPGTRWLFWTDWGEN---PRIERIGMDGSNR-STIIST 235
+ L DN + P + D WL + N IE + +DG + TII
Sbjct: 1713 KTLFLGADNGIVGAPYTIAFD------WLGRNLYIGNRVASNIEAVRVDGKQKYRTIILA 1766
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
+PN ++ + +I + + +F WID G VP+K
Sbjct: 1767 NDGYPNSVS--------------------RPKQIVLDPSEGKLF----WIDNGVLEVPVK 1802
Query: 296 IGKANMDGSNASILVSGQLY-EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
IG+ +M+G NA +L + E++A+D++ MLYYS+ P I +
Sbjct: 1803 IGRVDMNGQNAQLLFQDLTHPESIAVDIDKKMLYYSS------------SNPPVIGSMDY 1850
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFAD---SKLDFIDFCNYDGTGRQQVI 406
+G + + I++ +L I R+Y+ D K+ +D N G R+ ++
Sbjct: 1851 NGEDHTIIMTDGHPIAKPRSLGILDHRLYYLDPVYEKIVRVDLPN--GDNRKTIV 1903
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 142/354 (40%), Gaps = 60/354 (16%)
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
A++ L S+ + ++ ++ G+DH I+ G + + + + +Y+LD
Sbjct: 1827 AVDIDKKMLYYSSSNPPVIGSMDYNGEDHTI--IMTDGHPIAKPRSLGILDHRLYYLDPV 1884
Query: 170 LNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+I D NG NR + DN R MM+ T + N + + + G
Sbjct: 1885 YEKIVRVDLPNGDNRKTIV-DNEPDLRSMMIYKKRAT--MQHPCQTNNGGCKHLCIPGPA 1941
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN------------VNYS 276
+ + I + ++ + + S+LD I SL + ++
Sbjct: 1942 ATRTCACGIGYRKENEINCVAYKTFAVVSQLDMIRGYSLSDSSEAMVPVSGPGHHILHVD 2001
Query: 277 TIFRK--LYWIDEGGNGVPLKIGKANMDGSNASILVSGQL----YEALALDLENGMLYYS 330
++R+ +YW E G I ++ +G++ +V + L +D G +Y++
Sbjct: 2002 VMYREQWIYWA-EFNRGYWNGIFRSRPNGTDLQHVVKDGIGSNGIRGLTIDWVAGNMYFT 2060
Query: 331 TL----------------------------------KCTRWLFWTDWGENPRIERIGMDG 356
+ R L+W D+G++PRI + +DG
Sbjct: 2061 NVYPHENYVEVSWLDGSNRKVLVKTTNDAPRELAVDPIKRLLYWIDYGQHPRIGKALLDG 2120
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
S + ++++ I P LT+D+ T +Y+ DSKLD I +Y G R +VI DL
Sbjct: 2121 SKWTPLVTSGISLPRDLTIDMQTHDIYWVDSKLDTIQKISYSGANR-KVIRRDL 2173
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 12/134 (8%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+ Y K+YW D N I N+DG+ ++ + A+ LD NG L+++
Sbjct: 2369 IAYDWTQHKIYWTDSSNN----SIYAMNLDGTELVMIARVERPRAIVLDPCNGTLFFTD- 2423
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
W +G + +I R M GS + I+ + P+GL +D RR+Y+ D+ + I
Sbjct: 2424 -------WGRFGTSGKIFRTTMAGSLKRAIVDKDLSQPSGLAIDYDERRLYWTDAVREKI 2476
Query: 393 DFCNYDGTGRQQVI 406
+ + +G R+ ++
Sbjct: 2477 ERSDLEGRNRELLV 2490
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 130/341 (38%), Gaps = 78/341 (22%)
Query: 70 DMNECEQ--PGYCSQMC--------TNTKG-SYICSCNEGYVLEYDNHTCKAINHSAAFL 118
D N C G C Q+C +T G ++ C C G L D C+++N +L
Sbjct: 2234 DTNPCAHLGNGGCDQLCFSFPPDSGASTGGRNFRCECATGK-LGADERKCESVNE---YL 2289
Query: 119 IISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-NRIEVCD 177
+ + R I +L+ + ++ L V GL +D+ + + R +I
Sbjct: 2290 VFATRTEIRAVNLDPHSTE--VPFTPLTNLTNVVGLDFDFADNRMLYTQIRPWAKIAYTK 2347
Query: 178 ENGTNR--IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST 235
N + I + + P G+ D + ++WTD N I + +DG+ ++
Sbjct: 2348 ANKPSHSDITVVLNKGINPEGIAYDWT--QHKIYWTDSSNN-SIYAMNLDGT--ELVMIA 2402
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
++ P + LD ++F D W G G K
Sbjct: 2403 RVERPRAIVLDPCNGTLFFTD---------------------------W---GRFGTSGK 2432
Query: 296 IGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
I + M GS +V L + LA+D + R L+WTD +IER
Sbjct: 2433 IFRTTMAGSLKRAIVDKDLSQPSGLAIDYDE-----------RRLYWTD-AVREKIERSD 2480
Query: 354 MDGSNRSTIISTKIYWPNGLTL--------DIATRRVYFAD 386
++G NR +++ IY P +T+ D+ R VY A+
Sbjct: 2481 LEGRNRELLVAATIY-PFAITVFRNYIYWTDLQLRGVYRAE 2520
>gi|195446934|ref|XP_002070989.1| GK25553 [Drosophila willistoni]
gi|194167074|gb|EDW81975.1| GK25553 [Drosophila willistoni]
Length = 4521
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/377 (54%), Positives = 245/377 (64%), Gaps = 54/377 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V +RCVN+T VCD DCPNGADEG GCDLAEC H+ G CSN C TP GALC CPPG
Sbjct: 1204 VTERCVNITSVCDDTPDCPNGADEGEGCDLAECVHQTGQCSNFCQKTPNGALCVCPPGSE 1263
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
+ D TC D NEC+ PG CSQ CTNTKGSY CSC +GY+LE + HTCKA+NH+AAFLII
Sbjct: 1264 IGEDGFTCVDTNECDPPGLCSQQCTNTKGSYFCSCTDGYILEPNKHTCKAVNHTAAFLII 1323
Query: 121 SNRHSILVADLEEKG-------------------------------------KDHRAQDI 143
SNRHSILVADL+E+G + Q+I
Sbjct: 1324 SNRHSILVADLKEQGLERVPIIVENVVATASNMHTGTIFWSDMKLKKISRLDRGMEPQEI 1383
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ +GLDLVEGLAYDWI ++YWLDS+LN IEV ENG+NR+VL ++NITQPRGM +DPSP
Sbjct: 1384 ITTGLDLVEGLAYDWIAQNLYWLDSKLNTIEVSAENGSNRLVLVRENITQPRGMCIDPSP 1443
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G RW+FWTDWGENPR+ERIGMDG+ R TII+TKIYWPNGLTLDIAT+RVYFADSKLDFID
Sbjct: 1444 GARWIFWTDWGENPRVERIGMDGTMRKTIINTKIYWPNGLTLDIATKRVYFADSKLDFID 1503
Query: 264 -------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
+S + + S LYW D N V + G N ++ V
Sbjct: 1504 FCYYNGTGRQQVLARSHYLLHPHSLSLFEDTLYWTDRQLNRV---LSANKFRGKNQTV-V 1559
Query: 311 SGQLYEALALDLENGML 327
S + + L++ + + L
Sbjct: 1560 SHLISQPLSIHVHHASL 1576
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 154/315 (48%), Gaps = 53/315 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C++ + VC+ DC + +DE C++ EC K + C + C T C C G L
Sbjct: 2977 QCIDYSLVCNKIPDCADESDEPAHCNVDECAKVEINQCGHKCVDTLTSYYCDCNEGYKLL 3036
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYV-LEYDNHTCKAINHSAAFLII 120
D C D++EC EQPG CSQ C+NT GS+ C C+E Y + D HTCK ++ +LI
Sbjct: 3037 ADGKACADVDECLEQPGACSQHCSNTPGSFYCKCDENYYERQNDEHTCKRKDNIPPWLIF 3096
Query: 121 SNRHSILVADLEEKGKDHRAQDIV-VSGLDL----------------------------- 150
+N++ + ++ + QD++ V LD
Sbjct: 3097 TNKYYVRNMSVDGHQYNLMHQDLMNVVALDFDIKDQYMYFCDVTAKTIFRAKYTDPQVDD 3156
Query: 151 ---------------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
+EG+A DW+G +YWLD ++V + +GT R L + + PR
Sbjct: 3157 TPPEREAIIRHDSHGLEGIAIDWVGRKLYWLDRHSKNLDVSELDGTKRKTL-RSGVVDPR 3215
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVY 253
+++ PG +L++T W I ++GMDGSN + I+ + I WPN L++D T R+Y
Sbjct: 3216 AIVV--HPGIGYLYFTSWHLQAYIAKMGMDGSNFTRILNWNDGIAWPNALSIDYFTDRIY 3273
Query: 254 FADSKLDFIDCKSLE 268
+AD+ LD++ LE
Sbjct: 3274 WADAHLDYVAYADLE 3288
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 135/518 (26%), Positives = 224/518 (43%), Gaps = 93/518 (17%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
A +C+ +K+CDGK DC +G+DE C +A C C C P+ G +C C PG+ L
Sbjct: 154 APKCIFKSKLCDGKRDCEDGSDEETNCSIASCPALS--CEYKCGPSLTGGVCYCRPGQSL 211
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+ D+ TC D++EC + G+C Q+CTNT GSY C C +GY L + C A + + LI +
Sbjct: 212 APDNRTCADLDECAEWGHCDQLCTNTLGSYSCQCAQGYTL-INESKCIAPDANNLQLIFA 270
Query: 122 NRHSILVADLEEKGKD---------------HRAQDIV--------------------VS 146
+ +I+ ++ G D H A++ + V+
Sbjct: 271 HDRAIMR--MKAHGGDPQILANATAAAGVAFHYARNTLYWSDIKTRKVQSLPLDPSNGVA 328
Query: 147 GLDLV-------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
LD LA DW+G IY D +I+V + +G V+ N+T P + L
Sbjct: 329 PLDQTLPGTWAPVALAVDWVGDKIYVADLVGQKIDVFELSGNWHAVVLGSNLTSPADLAL 388
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP+ G +F D G+ + R MDG++ +I+S Y +G+T+DI +RV++ DS L
Sbjct: 389 DPTAGL--MFVADGGQ---VLRAHMDGTHARSIVSEAAYKASGVTVDIIAKRVFWCDSLL 443
Query: 260 DFIDC------------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307
D+I+ + ++ + + ++YW D G+ + + K +G +S
Sbjct: 444 DYIESVDYEGSQRVMVLRGQQVPSPSRLALFENRIYWTDATKQGI-MSVDK--FEGP-SS 499
Query: 308 ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 367
I V+ Y+A + G++ L R NP G G N I++
Sbjct: 500 IQVT---YKAKDIREPKGIIAVHALSQPRV-------SNPCGNNNG--GCNHMCIVTAVK 547
Query: 368 YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPAL 427
P GL A Y + L QQ + ++E + D +P +
Sbjct: 548 GAPTGLGFRCACHTGYQLQTDLKNCKLVREFLMYSQQRFIKGKVLEPVIEGFSDAILPVV 607
Query: 428 A---------LDLENGMLYYSTEGAEFLKTPLFCITRN 456
+ D + +YYS + L+ ++ + RN
Sbjct: 608 SRRARFVGLDFDARDEFIYYS----DVLQDVIYRVHRN 641
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 172/429 (40%), Gaps = 104/429 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHK-FGLCSNTCHP-TPLGALCTCPPGEIL 61
+CV ++VCD DC + +DE + C + G C + CH T G +CTC PG I+
Sbjct: 3850 KCVERSQVCDFSDDCGDASDELGCHHTSSCSEQNRGGCQHHCHNLTEGGYICTCYPGYII 3909
Query: 62 SNDSVT-CQDMNECEQPGY-CSQMCTNTKGSYICSCNEGY-----------------VLE 102
+ D+ C D++EC + CS C N G+Y CSC EG+ +L
Sbjct: 3910 AADNKKKCVDVDECATRQHTCSHQCHNMNGTYSCSCREGFRLSDGASGVCKAEKDDVILV 3969
Query: 103 YDN---------------------HTCKAINHSAAFLII--------SNRHSILVADLEE 133
Y N +A+++ A I+ + + S +V L+
Sbjct: 3970 YANGPEIRGLDLQKQEDFDVVAAEKRIEALDYDAQQQIVFWADSYDKTIKRSYMVNALDG 4029
Query: 134 KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD------SRLNRIEVCDENGTNRIVLA 187
+ K AQD+ + G +A DW+ ++YW + R+ V +G R +
Sbjct: 4030 QAKIGFAQDLNMKGGSKPTAVAVDWLASNLYWTEMDRTGSKPRGRVMVAKTDGRYRRSIV 4089
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P + ++P G ++W D G P+IE MDGS R +I+ +I P GLT+D
Sbjct: 4090 NAGLEVPTSIAVNPQLGR--IYWADAGSAPKIEVSWMDGSKRRPLITEQIRHPAGLTIDY 4147
Query: 248 ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307
A + +YW+D N I DGS
Sbjct: 4148 AQDHI-----------------------------IYWVDTKLNA----IESMRADGSRRK 4174
Query: 308 ILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 366
++ G QL ++LDL +Y+ T D GE R ++ G ++
Sbjct: 4175 AIIKGDQLRHPVSLDLFESNMYWVT---------RDTGELLRQDKFGR---GVQVVVHRN 4222
Query: 367 IYWPNGLTL 375
+ P+GL +
Sbjct: 4223 LVNPSGLKV 4231
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 110/240 (45%), Gaps = 52/240 (21%)
Query: 78 GYCSQMC--TNTKGS-----YICSCNEGYVLEYDNHTCKAINH----------------- 113
G C+ MC T KG+ + C+C+ GY L+ D CK +
Sbjct: 535 GGCNHMCIVTAVKGAPTGLGFRCACHTGYQLQTDLKNCKLVREFLMYSQQRFIKGKVLEP 594
Query: 114 ------SAAFLIISNRHSILVADLEEKG--------------KDHR---AQDIVVSGLDL 150
A ++S R + D + + + HR ++IV++ +
Sbjct: 595 VIEGFSDAILPVVSRRARFVGLDFDARDEFIYYSDVLQDVIYRVHRNGTGREIVLASQNE 654
Query: 151 -VEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
VEGLA DW ++Y++DSR + V N T+R L K N+ +PR +++ P+ G ++
Sbjct: 655 GVEGLAVDWASKNLYYIDSRKGTLNVLSTRNVTHRRTLLK-NLKRPRAIVVHPNRG--YI 711
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
F+++W I R DGSN + + WPNGL++D RVY+ D+ LD + SL+
Sbjct: 712 FFSEWDRPANITRANTDGSNLLVFRNVTLGWPNGLSIDFKEDRVYWCDALLDHVQHASLD 771
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 24/165 (14%)
Query: 141 QDIVVSGL--DLVEGLAYDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRG 196
Q +V G+ + + GL DW+ G++Y+ + N +EVC +G+NR VL K PR
Sbjct: 2016 QHVVKDGIGSNGIRGLTIDWVAGNMYFTNVYPHENYVEVCWLDGSNRKVLVKTTNDAPRE 2075
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ ++P R L+W D+G++PRI + +DG + ++++ I P LT+D+ T VY+ D
Sbjct: 2076 LAVNPI--KRLLYWIDYGQHPRIGKALLDGDKWTPLVTSGISLPRDLTIDMQTHDVYWVD 2133
Query: 257 SKLDFIDCKSLEIKTN-VNYSTIFRKL-------------YWIDE 287
SKLD I +I N VN I R L YW+D
Sbjct: 2134 SKLDTIQ----KISYNGVNRKVIRRDLPNPMGIAIYLNDVYWVDR 2174
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 119/509 (23%), Positives = 192/509 (37%), Gaps = 158/509 (31%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSN---TC---------------- 44
RC+N +CD DC +G DEG C+ K+ CSN TC
Sbjct: 2894 RCINKGWLCDHDNDCGDGTDEGKFCNT-----KYKACSNQEFTCQNFKCIRNQYRCDGED 2948
Query: 45 ----HPTPLGAL---CTCPPGEILSND------SVTCQDMNEC----EQPGYCS------ 81
H + TCP G+ + S+ C + +C ++P +C+
Sbjct: 2949 DCGDHSDEVDCKKDNTTCPQGQFACTNGQCIDYSLVCNKIPDCADESDEPAHCNVDECAK 3008
Query: 82 -------QMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK 134
C +T SY C CNEGY L D C ++ LE+
Sbjct: 3009 VEINQCGHKCVDTLTSYYCDCNEGYKLLADGKACADVDEC----------------LEQP 3052
Query: 135 G--KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
G H + G Y CDEN R D T
Sbjct: 3053 GACSQHCSN-----------------TPGSFYCK---------CDENYYER---QNDEHT 3083
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
R + P WL +T+ + + +DG ++ ++ + L DI + +
Sbjct: 3084 CKRKDNIPP-----WLIFTN---KYYVRNMSVDG-HQYNLMHQDLMNVVALDFDIKDQYM 3134
Query: 253 YFAD--SKLDF--------IDCKSLEIKTNVNYST----------IFRKLYWIDEGGNGV 292
YF D +K F +D E + + + + + RKLYW+D +
Sbjct: 3135 YFCDVTAKTIFRAKYTDPQVDDTPPEREAIIRHDSHGLEGIAIDWVGRKLYWLDRHSKNL 3194
Query: 293 PLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+ + +DG+ L SG + + A+ + G+ Y L++T W I ++
Sbjct: 3195 DV----SELDGTKRKTLRSG-VVDPRAIVVHPGIGY---------LYFTSWHLQAYIAKM 3240
Query: 353 GMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
GMDGSN + I++ I WPN L++D T R+Y+AD+ LD++ + + +G R +V
Sbjct: 3241 GMDGSNFTRILNWNDGIAWPNALSIDYFTDRIYWADAHLDYVAYADLEGRHRHKV----- 3295
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYS 439
L G+ AL L + +Y+S
Sbjct: 3296 -------LTGNQVPHVFALSLFDDYVYWS 3317
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 89/185 (48%), Gaps = 42/185 (22%)
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EG+AYDW IYW DS N I + +G+ +++A+ + +PR ++LDP GT LF+T
Sbjct: 2349 EGIAYDWTQQKIYWTDSSNNSIYAMNLDGSELVMIAR--VERPRAIVLDPCNGT--LFFT 2404
Query: 212 DWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
DWG + +I R M GS + I+ + P+GL +D RR
Sbjct: 2405 DWGRFGTSGKIFRTTMAGSLKRAIVDKDLSQPSGLAIDYDERR----------------- 2447
Query: 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLY 328
LYW D V KI ++++DG N +LV+ +Y A+ + +Y
Sbjct: 2448 -------------LYWTD----AVREKIERSDLDGRNRELLVAATIY-PFAITVFRDYIY 2489
Query: 329 YSTLK 333
++ L+
Sbjct: 2490 WTDLQ 2494
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 135/345 (39%), Gaps = 79/345 (22%)
Query: 72 NECEQPGYCSQMC----TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL 127
N C Q C +C + T+G Y C C G+ L + + I +L++ I+
Sbjct: 1582 NPCAQ-AKCQHLCLLSPSATEG-YSCKCKPGFKLLSEG---RCIEEENPYLMVVKGTQIV 1636
Query: 128 VADLEEKGKDHRAQDIV-VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD------ENG 180
DL G D RA + V G++ GL +D G +YW+ R + E C G
Sbjct: 1637 --DLPLNGGDARAGALAPVIGIESSTGLDFDRKGETLYWVQGREDDDENCTIFTTPYGGG 1694
Query: 181 TNRIVLAKDN--ITQPRGMMLDPSPGTRWLFWTDWGEN---PRIERIGMDGSNR-STII- 233
+ L D + P + D WL + N IE + +DG R T+I
Sbjct: 1695 NKTLFLGIDTGIVGAPYTIAFD------WLGRNLYIGNRVASNIEAVRVDGKQRYRTVIL 1748
Query: 234 -----STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
+ + P L LD + KL+WIDEG
Sbjct: 1749 ANDGNANAVSKPKQLVLDPSD------------------------------GKLFWIDEG 1778
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLY-EALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
VP+KIG+ NM+G +A +L + + E++A+D+E +YYST
Sbjct: 1779 VLEVPVKIGRVNMNGEDAKVLRADLKHPESIAVDIEKKTIYYSTRA------------PA 1826
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
I + +G + + IIS +L I R+Y+ D + I
Sbjct: 1827 TICSMDYNGDDHTIIISEDQAISRPRSLGILDHRLYYLDPVYEKI 1871
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 14/112 (12%)
Query: 301 MDGSNASILV--SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSN 358
+DGSN +LV + LA++ R L+W D+G++PRI + +DG
Sbjct: 2057 LDGSNRKVLVKTTNDAPRELAVN-----------PIKRLLYWIDYGQHPRIGKALLDGDK 2105
Query: 359 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ ++++ I P LT+D+ T VY+ DSKLD I +Y+G R +VI DL
Sbjct: 2106 WTPLVTSGISLPRDLTIDMQTHDVYWVDSKLDTIQKISYNGVNR-KVIRRDL 2156
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+ Y +K+YW D N I N+DGS ++ + A+ LD NG L+++
Sbjct: 2351 IAYDWTQQKIYWTDSSNNS----IYAMNLDGSELVMIARVERPRAIVLDPCNGTLFFTD- 2405
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
W +G + +I R M GS + I+ + P+GL +D RR+Y+ D+ + I
Sbjct: 2406 -------WGRFGTSGKIFRTTMAGSLKRAIVDKDLSQPSGLAIDYDERRLYWTDAVREKI 2458
Query: 393 DFCNYDGTGRQQVI 406
+ + DG R+ ++
Sbjct: 2459 ERSDLDGRNRELLV 2472
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 131/346 (37%), Gaps = 89/346 (25%)
Query: 70 DMNECEQ--PGYCSQMC--------TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI 119
D N C G C Q+C + T ++ C C G L D C+ +N +L+
Sbjct: 2217 DSNPCAHLGNGGCDQLCFSFPPDPSSTTGRNFRCDCATGK-LSSDERKCETVNE---YLV 2272
Query: 120 ISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD---------SRL 170
+ R I +L+ + ++ L V GL +D+ + + ++
Sbjct: 2273 FATRTEIRAVNLDPHSTE--VPFTPLTNLTNVVGLDFDFADNRMLYTQIRPWAKIAYTKA 2330
Query: 171 NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS 230
N+ D N +VL K P G+ D + + ++WTD N I + +DGS
Sbjct: 2331 NKPSYSDIN----VVLNKG--INPEGIAYDWT--QQKIYWTDSSNN-SIYAMNLDGS--E 2379
Query: 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN 290
++ ++ P + LD ++F D W G
Sbjct: 2380 LVMIARVERPRAIVLDPCNGTLFFTD---------------------------W---GRF 2409
Query: 291 GVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
G KI + M GS +V L + LA+D + R L+WTD +
Sbjct: 2410 GTSGKIFRTTMAGSLKRAIVDKDLSQPSGLAIDYDE-----------RRLYWTD-AVREK 2457
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTL--------DIATRRVYFAD 386
IER +DG NR +++ IY P +T+ D+ R VY A+
Sbjct: 2458 IERSDLDGRNRELLVAATIY-PFAITVFRDYIYWTDLQLRGVYRAE 2502
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 14/89 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALC---------- 53
RC+ CD + DC + +DEG C C + C T H P +C
Sbjct: 997 RCIPNMWKCDSENDCGDSSDEGEFCAEKTCAYFQFTCPRTGHCIPQSWVCDGDDDCFDKQ 1056
Query: 54 ---TCPPGEILSNDSVTCQDMNECEQPGY 79
CPP L+N C DM +C + Y
Sbjct: 1057 DEKDCPPISCLAN-QFKCSDMRQCVEESY 1084
>gi|195565939|ref|XP_002106552.1| GD16065 [Drosophila simulans]
gi|194203931|gb|EDX17507.1| GD16065 [Drosophila simulans]
Length = 1626
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/377 (53%), Positives = 248/377 (65%), Gaps = 54/377 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V++RCVN+T VCD DCPNG+DEG GCDLAEC+H+ G CS+ C TP GALC CPPG
Sbjct: 819 VSERCVNITSVCDDTPDCPNGSDEGEGCDLAECEHQAGQCSSFCQKTPNGALCVCPPGSE 878
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
+ D TC D NEC+ PG CSQ CTNTKGSY CSC +GYVLE + HTCKA+NH+AAFLII
Sbjct: 879 IGEDGFTCVDSNECDPPGLCSQQCTNTKGSYFCSCTDGYVLEPNKHTCKAVNHTAAFLII 938
Query: 121 SNRHSILVADLEEKG-------------------------------------KDHRAQDI 143
SNRHSILVADL+E+G + Q+I
Sbjct: 939 SNRHSILVADLKEQGLERVPIIVENVVATASNMHTGTIFWSDMKLKKISRLDRGMEPQEI 998
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ +GLDLVEGLAYDWI ++YWLDS+LN IEV ENG+NR+VL ++NITQPRGM +DPSP
Sbjct: 999 INTGLDLVEGLAYDWIAQNLYWLDSKLNTIEVSAENGSNRLVLVRENITQPRGMCIDPSP 1058
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G RW+FWTDWGENPR+ERIGMDG+ R TII+TKIYWPNGLTLDIAT+RVYFADSKLDFID
Sbjct: 1059 GARWIFWTDWGENPRVERIGMDGTMRKTIINTKIYWPNGLTLDIATKRVYFADSKLDFID 1118
Query: 264 ------CKSLEIKTNVNY-------STIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
++ + +Y S LYW D N V + G N ++ V
Sbjct: 1119 FCYYNGTGRQQVLASSHYLLHPHSLSLFEDTLYWTDRQLNRV---LSANKFRGKNQTV-V 1174
Query: 311 SGQLYEALALDLENGML 327
S + + L++ + + L
Sbjct: 1175 SHLISQPLSIHVHHASL 1191
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 52/240 (21%)
Query: 78 GYCSQMC--TNTKGS-----YICSCNEGYVLEYDNHTCKAINH----------------- 113
G C+ MC T KG+ + C+C+ GY LE D CK ++
Sbjct: 141 GGCNHMCIVTAVKGAPTGLGFRCACSTGYQLETDLKLCKPVSEFLMYSQQRFIKGKVLEP 200
Query: 114 ------SAAFLIISNRHSILVADLEEKG--------------KDHR---AQDIVVSGLDL 150
A ++S R + D + + + HR ++IV++ +
Sbjct: 201 VIEGFSDAIMPVVSRRARFVGLDFDARDEFIYYSDVLQDVIYRVHRNGTGREIVLASQNE 260
Query: 151 -VEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
VEGLA DW ++Y++DSR + V N T+R L K N+ +PR +++ P+ G ++
Sbjct: 261 GVEGLAVDWASKNLYYIDSRKGTLNVLSTRNVTHRRTLLK-NLKRPRAIVVHPNRG--FI 317
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
F+++W I R DGS + + WPNGL++D RVY+ D+ LD + +L+
Sbjct: 318 FFSEWDRPANITRANTDGSGLLVFKNVTLGWPNGLSIDFKEDRVYWCDALLDHVQHANLD 377
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 94/248 (37%), Gaps = 73/248 (29%)
Query: 80 CSQMC---TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
C +C + Y C C G+ L + + I FL++ I+ DL G
Sbjct: 1204 CQHLCLLSPSAPEGYSCKCKPGFKLLSEG---RCIEEENPFLMVVKGTQIV--DLPLNGG 1258
Query: 137 DHRAQDIV-VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-----------------E 178
D RA + V G++ GL +D G +YW+ R + E C E
Sbjct: 1259 DARAGALAPVIGIESSTGLDFDRKGETLYWVQGREDDDENCTIYTTPYGGGNKTLFLGIE 1318
Query: 179 NGT-------------------NR------------------IVLAKD----NITQPRGM 197
NG NR I+LA D ++++P+ +
Sbjct: 1319 NGIVGAPYTIAFDWLGRNLYIGNRVASNIEAVRVDGKQKYRTIILANDGYPNSVSRPKQI 1378
Query: 198 MLDPSPGTRWLFWTDWG--ENP-RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
LDP+ G LFW D G E P +I R+ M+G N ++ + P L +D + VY+
Sbjct: 1379 ALDPTDGK--LFWIDEGVLEVPIKIGRVDMNGQN-PIVVFQDVSHPESLAVDTEKKMVYY 1435
Query: 255 ADSKLDFI 262
+ S I
Sbjct: 1436 SASNRAVI 1443
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
+F D G+ + MDG++ +I+S Y +G+T+DI ++RV++ DS LD+I+ +Y
Sbjct: 1 MFVADGGQ---VLPAHMDGTHARSIVSEAAYNASGVTVDIISKRVFWCDSLLDYIESVDY 57
Query: 398 DGTGRQQVI 406
+G R V+
Sbjct: 58 EGAHRVMVL 66
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 105/270 (38%), Gaps = 44/270 (16%)
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC--- 264
+F D G+ + MDG++ +I+S Y +G+T+DI ++RV++ DS LD+I+
Sbjct: 1 MFVADGGQ---VLPAHMDGTHARSIVSEAAYNASGVTVDIISKRVFWCDSLLDYIESVDY 57
Query: 265 ---------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ ++ + + +YW D G+ + + K SI V+ Y
Sbjct: 58 EGAHRVMVLRGQQVPSPSRLALFQNPIYWTDATERGI-MSVDKFQ---GPTSIPVT---Y 110
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
A + G++ L R NP G G N I++ P GL
Sbjct: 111 NAKDITEPKGIIAVHALSQPRV-------SNPCGNNNG--GCNHMCIVTAVKGAPTGLGF 161
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALA------- 428
A Y ++ L + QQ + ++E + D +P ++
Sbjct: 162 RCACSTGYQLETDLKLCKPVSEFLMYSQQRFIKGKVLEPVIEGFSDAIMPVVSRRARFVG 221
Query: 429 --LDLENGMLYYSTEGAEFLKTPLFCITRN 456
D + +YYS + L+ ++ + RN
Sbjct: 222 LDFDARDEFIYYS----DVLQDVIYRVHRN 247
>gi|194769742|ref|XP_001966960.1| GF21799 [Drosophila ananassae]
gi|190622755|gb|EDV38279.1| GF21799 [Drosophila ananassae]
Length = 4648
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/377 (53%), Positives = 248/377 (65%), Gaps = 54/377 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V++RCVN+T VCD DCPNG+DEG GCDLAEC+H+ G CSN C TP GALC CPPG
Sbjct: 1326 VSERCVNITSVCDDTPDCPNGSDEGEGCDLAECEHQAGRCSNFCQKTPNGALCVCPPGSE 1385
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
+ D TC D NEC+ PG CSQ CTNTKGSY CSC +GY+LE + HTCKA+NH+AAFLII
Sbjct: 1386 IGEDGYTCIDTNECDPPGLCSQQCTNTKGSYFCSCTDGYILEPNKHTCKAVNHTAAFLII 1445
Query: 121 SNRHSILVADLEEKG-------------------------------------KDHRAQDI 143
SNRHSILVADL+E+G + Q+I
Sbjct: 1446 SNRHSILVADLKEQGLERVPIIVENVVATASNMHTGTIFWSDMKLKKISRLDRGMEPQEI 1505
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ +GLDLVEGLAYDWI ++YWLDS+LN IEV ENG+NR+VL ++NITQPRGM +DPSP
Sbjct: 1506 ITTGLDLVEGLAYDWIAQNLYWLDSKLNTIEVSAENGSNRLVLVRENITQPRGMCIDPSP 1565
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G RW+FWTDWGENPR+ERIGMDG+ R TII+TKIYWPNGLTLDIAT+RVYFADSKLDFID
Sbjct: 1566 GARWIFWTDWGENPRVERIGMDGTMRKTIINTKIYWPNGLTLDIATKRVYFADSKLDFID 1625
Query: 264 ------CKSLEIKTNVNY-------STIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
++ + +Y S LYW D N V + G N ++ V
Sbjct: 1626 FCYYNGTGRQQVLASSHYLLHPHSLSLFEDTLYWTDRQLNRV---LSANKFRGKNQTV-V 1681
Query: 311 SGQLYEALALDLENGML 327
S + + L++ + + L
Sbjct: 1682 SHLISQPLSIHVHHASL 1698
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 135/514 (26%), Positives = 226/514 (43%), Gaps = 88/514 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C+ +++CDGK DC +G+DE C +A C G C C P+ G +C C PG+ LSN
Sbjct: 263 KCILKSQLCDGKRDCEDGSDEETNCSIASCP-ALG-CEFKCGPSLTGGVCYCKPGQSLSN 320
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVL------------------EYDN 105
D+ TC D++EC + G+C Q+CTNT GSY C C +GY L +D
Sbjct: 321 DNRTCVDLDECAEWGHCDQLCTNTLGSYTCQCAQGYTLINDSKCIAPDASNLQLIFAHDR 380
Query: 106 HTCKAINHSAAFLIISN------------RHSILVADLEEKGKDH---RAQDIVVSGLDL 150
+ + H + I++N R+++ +D++ + Q+ VS D
Sbjct: 381 AVMRMLAHGSDPKILANATAAAGVTFHYARNTLYWSDIKTRKVQSLPLDPQNKAVSPFDQ 440
Query: 151 V-------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
LA DW+G IY D +I+V + +G V+ N+T P + LDP+
Sbjct: 441 TLPGTWAPVALAVDWVGDKIYVADLVGQKIDVFELSGQWHAVVLGSNLTSPADLALDPTA 500
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +F D G+ + R MDG++ +I+S Y +G+T+DI +RV++ DS LD+I+
Sbjct: 501 GL--MFVADGGQ---VLRAHMDGTHARSIVSEAAYKASGVTVDIIGKRVFWCDSLLDYIE 555
Query: 264 C------------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+ ++ + + ++YW D G+ + + K +G ASI V+
Sbjct: 556 SVDYEGAHRVMVLRGQQVPSPSRLALFENRIYWTDATKQGI-MSVDK--FEGP-ASIQVT 611
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
Y+A + G++ L R NP G G N I++ P
Sbjct: 612 ---YKAKDIREPKGIIAVHALSQPRV-------SNPCGNNNG--GCNHMCIVTAVKGAPT 659
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALA--- 428
GL A Y ++ L + QQ + ++E + D +P ++
Sbjct: 660 GLGFRCACSTGYQLETDLKLCKPVSEFLMYSQQRFIKGKVLEPVIEGFSDAIMPVVSRRA 719
Query: 429 ------LDLENGMLYYSTEGAEFLKTPLFCITRN 456
D + +YYS + L+ ++ + RN
Sbjct: 720 RFVGLDFDARDEFIYYS----DVLQDVIYRVHRN 749
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 155/314 (49%), Gaps = 52/314 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C++ + VC+ DC + +DE C++ EC K + C + C T G C C G L
Sbjct: 3101 QCIDYSLVCNKYPDCADESDEPAHCNVDECAKVEINQCGHKCVDTLTGYYCDCNEGYKLL 3160
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEG-YVLEYDNHTCKAINHSAAFLII 120
D C D++EC EQPG CSQ C+NT G + C C+E Y + D HTCK ++ +LI
Sbjct: 3161 ADGKACADVDECLEQPGACSQHCSNTPGGFYCKCDENHYERQNDEHTCKRKDNIPPWLIF 3220
Query: 121 SNRHSILVADLEEKGKDHRAQDIV-VSGLDL----------------------------- 150
+N++ + ++ + QD++ V LD
Sbjct: 3221 TNKYYVRNMSVDGHQYNLMHQDLMNVVALDFDIREEYMYFCDVTAKTIFRAKYGSADDET 3280
Query: 151 --------------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+EG+A DW+G +YWLD ++V + +GT R L + + PR
Sbjct: 3281 PPEREAVIRHDSHGLEGIAIDWVGRKLYWLDRHSKNLDVAELDGTKRKTL-RSGVVDPRA 3339
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYF 254
+++ PG +L++T W I ++GMDGSN +TI+ + I WPN L++D T R+Y+
Sbjct: 3340 IVV--HPGIGYLYFTSWHLQAYIAKMGMDGSNFTTILNWNDGIAWPNALSIDYFTDRIYW 3397
Query: 255 ADSKLDFIDCKSLE 268
AD+ LD+I LE
Sbjct: 3398 ADAHLDYIAYADLE 3411
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 173/429 (40%), Gaps = 104/429 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHK-FGLCSNTCHP-TPLGALCTCPPGEIL 61
C+ ++VCD DC + +DE ++ C + G C + CH T G +CTC PG I+
Sbjct: 3973 HCIERSQVCDFSDDCGDASDELGCHHVSSCSEQNRGGCQHHCHNLTDGGYICTCYPGYII 4032
Query: 62 SNDSVT-CQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVL------------------ 101
+ D+ C D++EC + CS C N G+Y CSC EG+ L
Sbjct: 4033 APDNKKKCTDVDECLTRQHTCSHQCHNLNGTYSCSCREGFHLTDGASGVCRAEKEDVILV 4092
Query: 102 ----------------EYD----NHTCKAINHSAAFLII--------SNRHSILVADLEE 133
E+D +A+++ A I+ + + S +V ++
Sbjct: 4093 FANGQEIRGLDLQKREEFDVIAAEKRIEALDYDAQQQIVFWADSYDKTIKRSYMVNAIDG 4152
Query: 134 KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD------SRLNRIEVCDENGTNRIVLA 187
+ K AQD+ + G +A DW+ ++YW + R+ V +G R +
Sbjct: 4153 RAKIGFAQDLNMKGGSKPTAVAVDWLASNLYWTEMDRTGSKPRGRVMVAKTDGRYRRSIV 4212
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P + ++P G ++W+D G P+IE MDGS R +I+ +I P GLT+D
Sbjct: 4213 NAGLEVPTSIAVNPQLGR--IYWSDAGSAPKIEVSWMDGSKRRPLITEQIRHPAGLTIDY 4270
Query: 248 ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307
+ + +YW+D N I DGS
Sbjct: 4271 SQDHI-----------------------------IYWVDTKLNA----IESMRADGSRRK 4297
Query: 308 ILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 366
+V G QL ++LDL +++ T D GE R ++ G ++
Sbjct: 4298 AIVKGDQLRHPVSLDLFESNMFWMT---------RDTGELLRQDKFGR---GVQVVLHQN 4345
Query: 367 IYWPNGLTL 375
+ P+GL +
Sbjct: 4346 LINPSGLKV 4354
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 82/153 (53%), Gaps = 14/153 (9%)
Query: 147 GLDLVEGLAYDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
G + + GL DW+ G++Y+ + N +EVC +G+NR VL K PR + ++P
Sbjct: 2147 GSNGIRGLTIDWVAGNLYFTNVYPHENYVEVCWLDGSNRKVLVKTTTDAPRELAVNPI-- 2204
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
R L+W D+G++PRI + +DGS + ++++ I P LT+D+ T +++ DSKLD I
Sbjct: 2205 KRLLYWIDYGQHPRIGKALLDGSKWTPLVTSGISMPRDLTIDMQTHDIFWVDSKLDTIQK 2264
Query: 265 KSL----------EIKTNVNYSTIFRKLYWIDE 287
S ++ + + +YW+D
Sbjct: 2265 ISYNGANRKVIRRDLPNPMGIAVYLNDVYWVDR 2297
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 118/502 (23%), Positives = 184/502 (36%), Gaps = 145/502 (28%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD--LAECKHKFGLCSN-TC---------------H 45
RC+N +CD DC +G DEG C+ C + C N C H
Sbjct: 3018 RCINKGWICDHDNDCGDGTDEGKFCNSKYKTCSTQEFTCQNFKCIRNQYRCDGEDDCGDH 3077
Query: 46 PTPLGAL---CTCPPGEILSND------SVTCQDMNEC----EQPGYCS----------- 81
+G TCP G+ + S+ C +C ++P +C+
Sbjct: 3078 SDEVGCKKDNVTCPQGQFACTNGQCIDYSLVCNKYPDCADESDEPAHCNVDECAKVEINQ 3137
Query: 82 --QMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHR 139
C +T Y C CNEGY L D C ++ LE+ G +
Sbjct: 3138 CGHKCVDTLTGYYCDCNEGYKLLADGKACADVDEC----------------LEQPGACSQ 3181
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
G CDEN R D T R +
Sbjct: 3182 HCSNTPGGFYCK------------------------CDENHYER---QNDEHTCKRKDNI 3214
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P WL +T+ + + +DG ++ ++ + L DI +YF D
Sbjct: 3215 PP-----WLIFTN---KYYVRNMSVDG-HQYNLMHQDLMNVVALDFDIREEYMYFCDVTA 3265
Query: 260 DFI---------DCKSLEIKTNVNYST----------IFRKLYWIDEGGNGVPLKIGKAN 300
I D E + + + + + RKLYW+D + + A
Sbjct: 3266 KTIFRAKYGSADDETPPEREAVIRHDSHGLEGIAIDWVGRKLYWLDRHSKNLDV----AE 3321
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DG+ L SG + + A+ + G+ Y L++T W I ++GMDGSN +
Sbjct: 3322 LDGTKRKTLRSG-VVDPRAIVVHPGIGY---------LYFTSWHLQAYIAKMGMDGSNFT 3371
Query: 361 TIIS--TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
TI++ I WPN L++D T R+Y+AD+ LD+I + + +G R V
Sbjct: 3372 TILNWNDGIAWPNALSIDYFTDRIYWADAHLDYIAYADLEGRHRHTV------------- 3418
Query: 419 MGDNGVP-ALALDLENGMLYYS 439
M + VP AL L + +Y+S
Sbjct: 3419 MSGSKVPHVFALSLFDDYIYWS 3440
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 52/240 (21%)
Query: 78 GYCSQMC--TNTKGS-----YICSCNEGYVLEYDNHTCKAINH----------------- 113
G C+ MC T KG+ + C+C+ GY LE D CK ++
Sbjct: 643 GGCNHMCIVTAVKGAPTGLGFRCACSTGYQLETDLKLCKPVSEFLMYSQQRFIKGKVLEP 702
Query: 114 ------SAAFLIISNRHSILVADLEEKG--------------KDHR---AQDIVVSGLDL 150
A ++S R + D + + + HR ++IV++ +
Sbjct: 703 VIEGFSDAIMPVVSRRARFVGLDFDARDEFIYYSDVLQDVIYRVHRNGTGREIVLASQNE 762
Query: 151 -VEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
VEGLA DW ++Y++DSR + V N T+R L K N+ +PR +++ P+ G ++
Sbjct: 763 GVEGLAVDWASKNLYYIDSRKGTLNVLSTRNVTHRRTLLK-NLKRPRAIVVHPNRG--FI 819
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
F+++W I R DGS + + WPNGL++D RVY+ D+ LD + +L+
Sbjct: 820 FFSEWDRPANITRANTDGSGLLVFKNVTLGWPNGLSIDFKEDRVYWCDALLDHVQHANLD 879
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 88/185 (47%), Gaps = 42/185 (22%)
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EG+AYDW IYW DS N I + +GT +++ + + +PR ++LDP GT LF+T
Sbjct: 2473 EGIAYDWTQKKIYWTDSSNNSIYAMNLDGTELVMITR--VERPRAIVLDPCNGT--LFFT 2528
Query: 212 DWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
DWG + +I R M GS + I+ + P+GL +D R
Sbjct: 2529 DWGRFGTSGKIFRTTMAGSLKRAIVDKDLSQPSGLAIDYDER------------------ 2570
Query: 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLY 328
KLYW D V KI ++++DG N +LV+ +Y A+ + +Y
Sbjct: 2571 ------------KLYWTD----AVREKIERSDLDGQNRELLVAATIY-PFAITVFRNYIY 2613
Query: 329 YSTLK 333
++ L+
Sbjct: 2614 WTDLQ 2618
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGSN +LV L + R L+W D+G++PRI + +DGS +
Sbjct: 2180 LDGSNRKVLVKTTTDAPRELAVN---------PIKRLLYWIDYGQHPRIGKALLDGSKWT 2230
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
++++ I P LT+D+ T +++ DSKLD I +Y+G R +VI DL
Sbjct: 2231 PLVTSGISMPRDLTIDMQTHDIFWVDSKLDTIQKISYNGANR-KVIRRDL 2279
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+ Y +K+YW D N I N+DG+ ++ + A+ LD NG L+++
Sbjct: 2475 IAYDWTQKKIYWTDSSNN----SIYAMNLDGTELVMITRVERPRAIVLDPCNGTLFFTD- 2529
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
W +G + +I R M GS + I+ + P+GL +D R++Y+ D+ + I
Sbjct: 2530 -------WGRFGTSGKIFRTTMAGSLKRAIVDKDLSQPSGLAIDYDERKLYWTDAVREKI 2582
Query: 393 DFCNYDGTGRQQVI 406
+ + DG R+ ++
Sbjct: 2583 ERSDLDGQNRELLV 2596
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 101/263 (38%), Gaps = 74/263 (28%)
Query: 65 SVTCQDMNECEQPGYCSQMC---TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
S+ Q N C +C +C + Y C C G+ L + + I FL++
Sbjct: 1697 SLQPQHPNPCAA-SHCQHLCLLSPSAPEGYSCKCKPGFKLLSEG---RCIEDEKPFLMVV 1752
Query: 122 NRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGLAYDWIGGHIYWLDSR----------- 169
I+ DL KG D RA + V G++ GL +D G +YW+ R
Sbjct: 1753 KGTQIV--DLPLKGGDARAGALTPVIGIESSTGLDFDRKGETLYWVQGREEDEENCTIYT 1810
Query: 170 ----------------------------------------LNRIEVCDENGTNR---IVL 186
+ IE +G R I+L
Sbjct: 1811 TPYGGGNKTLFLGPDSGIVGAPYTIAFDWLGRNLYIGNRVASNIEAVRVDGKQRYRAIIL 1870
Query: 187 AKD----NITQPRGMMLDPSPGTRWLFWTDWG--ENP-RIERIGMDGSNRSTIISTKIYW 239
A D ++++P+ M LDP+ G LFW D G E P +I R+ M+G N I+ +
Sbjct: 1871 ANDGYPNSVSRPKQMALDPTDGK--LFWIDEGVLEVPVKIGRVDMNGQNPKVILD-DVPH 1927
Query: 240 PNGLTLDIATRRVYFADSKLDFI 262
P L +DI +++Y++ S I
Sbjct: 1928 PESLVVDIEKKQLYYSASNPGLI 1950
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 134/344 (38%), Gaps = 83/344 (24%)
Query: 70 DMNECEQ--PGYCSQMC------TNTKG----SYICSCNEGYVLEYDNHTCKAINHSAAF 117
D N C G C Q+C + T G ++ C C G L D C+ +N +
Sbjct: 2339 DANPCAHLGNGGCDQLCFSFPPDSGTTGPSGRNFRCDCATGK-LSSDERKCETVNE---Y 2394
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-NRIEVC 176
L+ + R I +L+ + ++ L V GL +D+ H+ + R +I
Sbjct: 2395 LVFATRTEIRAVNLDPHSTE--VPFTPLTNLTNVVGLDFDFAENHMLYTQIRPWAKIAYT 2452
Query: 177 DENGTN----RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI 232
N + ++VL K P G+ D + + ++WTD N I + +DG+ +
Sbjct: 2453 KANKPSHDDIKVVLNKG--INPEGIAYDWT--QKKIYWTDSSNN-SIYAMNLDGT--ELV 2505
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
+ T++ P + LD ++F D W G G
Sbjct: 2506 MITRVERPRAIVLDPCNGTLFFTD---------------------------W---GRFGT 2535
Query: 293 PLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
KI + M GS +V L + LA+D + R L+WTD +IE
Sbjct: 2536 SGKIFRTTMAGSLKRAIVDKDLSQPSGLAIDYDE-----------RKLYWTD-AVREKIE 2583
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTL--------DIATRRVYFAD 386
R +DG NR +++ IY P +T+ D+ R VY A+
Sbjct: 2584 RSDLDGQNRELLVAATIY-PFAITVFRNYIYWTDLQLRGVYRAE 2626
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 126/334 (37%), Gaps = 68/334 (20%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V SG+ + L D I+W+DS+L+ I+ NG NR V+ +D + P G+ + +
Sbjct: 2232 LVTSGISMPRDLTIDMQTHDIFWVDSKLDTIQKISYNGANRKVIRRD-LPNPMGIAVYLN 2290
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK--------IYWPNGLTLDIATRRVYF 254
++W D + + +T + T IY N D A +
Sbjct: 2291 D----VYWVDRNLMTVFKASKHSANETATRVRTNLEKLRDIAIYNINNQPTDDANPCAHL 2346
Query: 255 ADSKLDFIDCKSLEIKTNV---------------NYSTIFRKLYWIDEG-GNGVPLKIGK 298
+ D + C S + S+ RK ++E +I
Sbjct: 2347 GNGGCDQL-CFSFPPDSGTTGPSGRNFRCDCATGKLSSDERKCETVNEYLVFATRTEIRA 2405
Query: 299 ANMDGSNASILVSG--QLYEALALDL---ENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
N+D + + + L + LD EN MLY T+ W +I
Sbjct: 2406 VNLDPHSTEVPFTPLTNLTNVVGLDFDFAENHMLY------TQIRPWA---------KIA 2450
Query: 354 MDGSNRST-----IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
+N+ + ++ K P G+ D +++Y+ DS + I N DGT ++++I
Sbjct: 2451 YTKANKPSHDDIKVVLNKGINPEGIAYDWTQKKIYWTDSSNNSIYAMNLDGT---ELVMI 2507
Query: 409 DLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
VE A+ LD NG L+++ G
Sbjct: 2508 -TRVERPR---------AIVLDPCNGTLFFTDWG 2531
>gi|195350486|ref|XP_002041771.1| GM11364 [Drosophila sechellia]
gi|194123576|gb|EDW45619.1| GM11364 [Drosophila sechellia]
Length = 1676
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/377 (53%), Positives = 248/377 (65%), Gaps = 54/377 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
+++RCVN+T VCD DCPNG+DEG GCDLAEC+H+ G CS+ C TP GALC CPPG
Sbjct: 886 ISERCVNITSVCDDTPDCPNGSDEGEGCDLAECEHQAGQCSSFCQKTPNGALCVCPPGSE 945
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
+ D TC D NEC+ PG CSQ CTNTKGSY CSC +GYVLE + HTCKA+NH+AAFLII
Sbjct: 946 IGEDGFTCVDSNECDPPGLCSQQCTNTKGSYFCSCTDGYVLEPNKHTCKAVNHTAAFLII 1005
Query: 121 SNRHSILVADLEEKG-------------------------------------KDHRAQDI 143
SNRHSILVADL+E+G + Q+I
Sbjct: 1006 SNRHSILVADLKEQGLERVPIIVENVVATASNMHTGTIFWSDMKLKKISRLDRGMEPQEI 1065
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ +GLDLVEGLAYDWI ++YWLDS+LN IEV ENG+NR+VL ++NITQPRGM +DPSP
Sbjct: 1066 INTGLDLVEGLAYDWIAQNLYWLDSKLNTIEVSAENGSNRLVLVRENITQPRGMCIDPSP 1125
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G RW+FWTDWGENPR+ERIGMDG+ R TII+TKIYWPNGLTLDIAT+RVYFADSKLDFID
Sbjct: 1126 GARWIFWTDWGENPRVERIGMDGTMRKTIINTKIYWPNGLTLDIATKRVYFADSKLDFID 1185
Query: 264 ------CKSLEIKTNVNY-------STIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
++ + +Y S LYW D N V + G N ++ V
Sbjct: 1186 FCYYNGTGRQQVLASSHYLLHPHSLSLFEDTLYWTDRQLNRV---LSANKFRGKNQTV-V 1241
Query: 311 SGQLYEALALDLENGML 327
S + + L++ + + L
Sbjct: 1242 SHLISQPLSIHVHHASL 1258
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 157/286 (54%), Gaps = 27/286 (9%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C+ +++CDGK DC +G+DE C +A C C C P+ G +C C PG+ L+
Sbjct: 166 KCILKSQLCDGKRDCEDGSDEETNCSIASCPALS--CEFKCGPSLTGGVCYCKPGQSLAP 223
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC D++EC + G+C Q+CTNT GSY C C +GY L D+ C A + + LII++
Sbjct: 224 DNRTCVDLDECAEWGHCDQLCTNTLGSYTCQCAQGYTLINDSQ-CTAPDANNLPLIIAHD 282
Query: 124 HSIL-----------VADLEEKGKD-----HR---AQDIVVSGLDL-VEGLAYDWIGGHI 163
+I+ +A+ D HR ++IV++ + VEGLA DW ++
Sbjct: 283 RAIMRNAPHARELKGLANATAAASDVIYRVHRNGTGREIVLASQNEGVEGLAVDWASKNL 342
Query: 164 YWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI 222
Y++DSR + V N T+R L K N+ +PR +++ P+ G ++F+++W I R
Sbjct: 343 YYIDSRKGTLNVLSTRNVTHRRTLLK-NLKRPRAIVVHPNRG--FIFFSEWDRPANITRA 399
Query: 223 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
DGS + + WPNGL++D RVY+ D+ LD + +L+
Sbjct: 400 NTDGSGLLVFKNVTLGWPNGLSIDFKEDRVYWCDALLDHVQHANLD 445
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 76/187 (40%), Gaps = 43/187 (22%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
I R+ +G+ R +++++ GL +D A++ +Y+ DS+ ++ L + + T+
Sbjct: 309 IYRVHRNGTGREIVLASQNEGVEGLAVDWASKNLYYIDSRKGTLN--VLSTRNVTHRRTL 366
Query: 279 FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWL 338
+ L + A+ + G ++
Sbjct: 367 LKNL------------------------------KRPRAIVVHPNRG-----------FI 385
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
F+++W I R DGS + + WPNGL++D RVY+ D+ LD + N D
Sbjct: 386 FFSEWDRPANITRANTDGSGLLVFKNVTLGWPNGLSIDFKEDRVYWCDALLDHVQHANLD 445
Query: 399 GTGRQQV 405
GT + V
Sbjct: 446 GTDIKTV 452
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 94/248 (37%), Gaps = 73/248 (29%)
Query: 80 CSQMC---TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
C +C + Y C C G+ L + + I FL++ I+ DL G
Sbjct: 1271 CQHLCLLSPSAPEGYSCKCKPGFKLLSEG---RCIEEENPFLMVVKGTQIV--DLPLNGG 1325
Query: 137 DHRAQDIV-VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-----------------E 178
D RA + V G++ GL +D G +YW+ R + E C E
Sbjct: 1326 DARAGALAPVIGIESSTGLDFDRKGETLYWVQGREDDDENCTIYTTPYGGGNKTLFLGIE 1385
Query: 179 NGT-------------------NR------------------IVLAKD----NITQPRGM 197
NG NR I+LA D ++++P+ +
Sbjct: 1386 NGIVGAPYTIAFDWLGRNLYIGNRVASNIEAVRVDGKQKYRTIILANDGYPNSVSRPKQI 1445
Query: 198 MLDPSPGTRWLFWTDWG--ENP-RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
LDP+ G LFW D G E P +I R+ M+G N ++ + P L +D + VY+
Sbjct: 1446 ALDPTDGK--LFWIDEGVLEVPIKIGRVDMNGQN-PIVVFQDVSHPESLAVDTEKKMVYY 1502
Query: 255 ADSKLDFI 262
+ S I
Sbjct: 1503 SASNPAVI 1510
>gi|281360654|ref|NP_001096924.2| megalin, isoform A [Drosophila melanogaster]
gi|272506047|gb|ABW09371.2| megalin, isoform A [Drosophila melanogaster]
Length = 4769
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/377 (53%), Positives = 248/377 (65%), Gaps = 54/377 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V++RCVN+T VCD DCPNG+DEG GCDLAEC+H+ G CS+ C TP GALC CPPG
Sbjct: 1446 VSERCVNITSVCDDTPDCPNGSDEGEGCDLAECEHQAGQCSSFCQKTPNGALCVCPPGSE 1505
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
+ D TC D NEC+ PG CSQ CTNTKGSY CSC +GYVLE + HTCKA+NH+AAFLII
Sbjct: 1506 IGEDGYTCIDSNECDPPGLCSQQCTNTKGSYFCSCTDGYVLEPNKHTCKAVNHTAAFLII 1565
Query: 121 SNRHSILVADLEEKG-------------------------------------KDHRAQDI 143
SNRHSILVADL+E+G + Q+I
Sbjct: 1566 SNRHSILVADLKEQGLERVPIIVENVVATASNMHTGTIFWSDMKLKKISRLDRGMEPQEI 1625
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ +GLDLVEGLAYDWI ++YWLDS+LN IEV ENG+NR+VL ++NITQPRGM +DPSP
Sbjct: 1626 INTGLDLVEGLAYDWIAQNLYWLDSKLNTIEVSAENGSNRLVLVRENITQPRGMCIDPSP 1685
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G RW+FWTDWGENPR+ERIGMDG+ R TII+TKIYWPNGLTLDIAT+RVYFADSKLDFID
Sbjct: 1686 GARWIFWTDWGENPRVERIGMDGTMRKTIINTKIYWPNGLTLDIATKRVYFADSKLDFID 1745
Query: 264 ------CKSLEIKTNVNY-------STIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
++ + +Y S LYW D N V + G N ++ V
Sbjct: 1746 FCYYNGTGRQQVLASSHYLLHPHSLSLFEDTLYWTDRQLNRV---LSANKFRGKNQTV-V 1801
Query: 311 SGQLYEALALDLENGML 327
S + + L++ + + L
Sbjct: 1802 SHLISQPLSIHVHHASL 1818
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 132/514 (25%), Positives = 225/514 (43%), Gaps = 88/514 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C+ +++CDGK DC +G+DE C +A C C C P+ G +C C PG+ L+
Sbjct: 388 KCILKSQLCDGKRDCEDGSDEETNCSIASCPALS--CEFKCGPSLTGGVCYCKPGQSLAP 445
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVL------------------EYDN 105
D+ TC D++EC + G+C Q+CTNT GSY C C +GY L +D
Sbjct: 446 DNRTCVDLDECAEWGHCDQLCTNTLGSYTCQCAQGYTLINDSKCIAPDANNLQLIFAHDR 505
Query: 106 HTCKAINHSAAFLIISN------------RHSILVADLEEKGKDH---RAQDIVVSGLDL 150
+ + H + I++N R+++ +D++ + AQ+ VS D
Sbjct: 506 AIMRMLPHGSEPKILANATAAAGVTFHYARNTLYWSDIKTRKVQSLPLDAQNKAVSPFDQ 565
Query: 151 V-------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
LA DW+G IY D +I+V + +G V+ N+T P + LDP+
Sbjct: 566 TLPGTWAPVALAVDWVGDKIYVADLVGQKIDVFELSGQWHAVVLGSNLTSPADLALDPTA 625
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +F D G+ + R MDG++ +I+S Y +G+T+DI ++RV++ DS LD+I+
Sbjct: 626 GL--MFVADGGQ---VLRAHMDGTHARSIVSEAAYKASGVTVDIISKRVFWCDSLLDYIE 680
Query: 264 C------------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+ ++ + + ++YW D G+ + + K +G SI V+
Sbjct: 681 SVDYEGAHRVMVLRGQQVPSPSRLALFENRIYWTDATKQGI-MSVDK--FEGP-TSIQVT 736
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
Y+A + G++ L R NP G G N I++ P
Sbjct: 737 ---YKAKDIREPKGIIAVHALSQPRV-------SNPCGNNNG--GCNHMCIVTAVKGAPT 784
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALA--- 428
GL A Y ++ L + QQ + ++E + D +P ++
Sbjct: 785 GLGFRCACSTGYQLETDLKLCKPVSEFLMYSQQRFIKGKVLEPVIEGFSDAIMPVVSRRA 844
Query: 429 ------LDLENGMLYYSTEGAEFLKTPLFCITRN 456
D + +YYS + L+ ++ + RN
Sbjct: 845 RFVGLDFDARDEFIYYS----DVLQDVIYRVHRN 874
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 152/314 (48%), Gaps = 52/314 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C++ VC+ DC + +DE C++ EC K + C + C T G C C G L
Sbjct: 3222 QCIDYNLVCNKYPDCADESDEPAHCNVDECAKVEINQCGHKCVDTLTGYYCDCNEGYKLL 3281
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYV-LEYDNHTCKAINHSAAFLII 120
D C D++EC EQPG CSQ C+NT G + C C+E Y + D HTCK + +LI
Sbjct: 3282 ADGKACADVDECLEQPGACSQHCSNTPGGFYCKCDETYYERQNDEHTCKRKDKIPPWLIF 3341
Query: 121 SNRHSILVADLEEKGKDHRAQDIV-VSGLDL----------------------------- 150
+N++ + ++ + QD++ V LD
Sbjct: 3342 TNKYYVRNMSVDGHQYNLMHQDLMNVVALDFDIREEYMYFCDVTAKTIFRAKYGEADDEM 3401
Query: 151 --------------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+EG+A DW+G +YWLD ++V + +G+ R L + + PR
Sbjct: 3402 PPEREAVIRHDSHGLEGIAIDWVGRKLYWLDRHSKNLDVSELDGSKRKTL-RSGVVDPRA 3460
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYF 254
+++ PG +L++T W I ++GMDGSN S I+ + I WPN L++D T R+Y+
Sbjct: 3461 IVV--HPGIGYLYFTSWHLQAYIAKMGMDGSNFSRILNWNDGIAWPNALSIDYFTDRIYW 3518
Query: 255 ADSKLDFIDCKSLE 268
AD+ LD+I LE
Sbjct: 3519 ADAHLDYIAYADLE 3532
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 165/429 (38%), Gaps = 104/429 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHP-TPLGALCTCPPGEIL 61
C+ ++VCD DC + +DE + C G C CH T G +CTC PG I+
Sbjct: 4094 HCIERSQVCDFSDDCGDASDELGCHHTSSCSEANRGGCQQHCHNLTDGGYICTCYPGYII 4153
Query: 62 SNDSVT-CQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVL-EYDNHTCKAINHSAAFL 118
+ D+ C D++EC + CS C N G+Y CSC EG+ L + + C+A L
Sbjct: 4154 AADNKKKCSDVDECLTRQHTCSHQCHNLNGTYSCSCREGFHLTDGASGVCRAEKEDVILL 4213
Query: 119 IISN---------------------------------------------RHSILVADLEE 133
++ + S +V ++
Sbjct: 4214 FVNGQEIRGLNWHKSEEFAVIAAEKRIEALDYDAQQQIVFWADSYDKTIKRSYMVNAIDG 4273
Query: 134 KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD------SRLNRIEVCDENGTNRIVLA 187
+ K AQD+ + G +A DW+ ++YW + R+ V +G R +
Sbjct: 4274 RAKIGFAQDLNMKGGSKPTAVAVDWLASNLYWTEMDRTGSKPRGRVMVAKTDGRYRRSIV 4333
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P + ++P G ++W+D G P+IE MDGS R +I+ I P GLT+D
Sbjct: 4334 NAGLEVPTSIAVNPQLGR--IYWSDAGSAPKIEVSWMDGSKRRPLITEMIRHPAGLTIDY 4391
Query: 248 ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307
+ + +YW+D N I DGS
Sbjct: 4392 SQDHI-----------------------------IYWVDTKLNA----IESMRADGSRRK 4418
Query: 308 ILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 366
+V G QL ++LDL +++ T D GE R ++ G ++
Sbjct: 4419 AIVRGDQLRHPVSLDLFESNMFWMT---------RDTGELVRQDKFGR---GVQVVLHRY 4466
Query: 367 IYWPNGLTL 375
I P+GL +
Sbjct: 4467 IVNPSGLKV 4475
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 86/161 (53%), Gaps = 16/161 (9%)
Query: 141 QDIVVSGL--DLVEGLAYDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRG 196
Q +V G+ + + GL DW+ G++Y+ + N +EVC +G+NR VL K PR
Sbjct: 2259 QHVVKDGIGSNGIRGLTIDWVAGNMYFTNVYPHENYVEVCWLDGSNRKVLVKTTTDAPRE 2318
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ ++P R L+W D+G++PRI + +DGS + ++++ I P LT+D+ T +Y+ D
Sbjct: 2319 LAVNPI--KRLLYWIDYGQHPRIGKALLDGSKWTPLVTSGISLPRDLTIDMQTHDIYWVD 2376
Query: 257 SKLDFIDCKSL----------EIKTNVNYSTIFRKLYWIDE 287
SKLD I S ++ + + +YW+D
Sbjct: 2377 SKLDTIQKISYNGANRKIIRRDLPNPMGIAVYLNDVYWVDR 2417
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 52/240 (21%)
Query: 78 GYCSQMC--TNTKGS-----YICSCNEGYVLEYDNHTCKAINH----------------- 113
G C+ MC T KG+ + C+C+ GY LE D CK ++
Sbjct: 768 GGCNHMCIVTAVKGAPTGLGFRCACSTGYQLETDLKLCKPVSEFLMYSQQRFIKGKVLEP 827
Query: 114 ------SAAFLIISNRHSILVADLEEKG--------------KDHR---AQDIVVSGLDL 150
A ++S R + D + + + HR ++IV++ +
Sbjct: 828 VIEGFSDAIMPVVSRRARFVGLDFDARDEFIYYSDVLQDVIYRVHRNGTGREIVLASQNE 887
Query: 151 -VEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
VEGLA DW ++Y++DSR + V N T+R L K N+ +PR +++ P+ G ++
Sbjct: 888 GVEGLAVDWASKNLYYIDSRKGTLNVLSTRNVTHRRTLLK-NLKRPRAIVVHPNRG--FI 944
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
F+++W I R DGS + + WPNGL++D RVY+ D+ LD + +L+
Sbjct: 945 FFSEWDRPANITRANTDGSGLLVFKNVTLGWPNGLSIDFKEDRVYWCDALLDHVQHANLD 1004
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 89/185 (48%), Gaps = 42/185 (22%)
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EG+AYDW IYW DS N I + +G+ +++A+ + +PR ++LDP GT LF+T
Sbjct: 2594 EGIAYDWTQQKIYWTDSSNNSIYAMNLDGSELVMIAR--VERPRAIVLDPCNGT--LFFT 2649
Query: 212 DWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
DWG + +I R M GS + I+ + P+GL +D RR
Sbjct: 2650 DWGRFGTSGKIFRTTMAGSLKRAIVDKDLSQPSGLAIDYDERR----------------- 2692
Query: 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLY 328
LYW D V KI ++++DG N +LV+ +Y A+ + +Y
Sbjct: 2693 -------------LYWTD----AVREKIERSDLDGQNRELLVAATIY-PFAITVFRNYIY 2734
Query: 329 YSTLK 333
++ L+
Sbjct: 2735 WTDLQ 2739
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 185/474 (39%), Gaps = 89/474 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
RC+N +CD DC +G DEG C+ K+ CS TC + + N
Sbjct: 3139 RCINKGWICDHDNDCGDGTDEGKFCN-----SKYKTCS--------AQEFTCQNFKCIRN 3185
Query: 64 DSVTCQDMNEC----EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI 119
S C ++C ++ G + T +G + +C G ++Y+ K + +
Sbjct: 3186 QS-RCDGEDDCGDHSDEVGCAKENITCPQGQF--ACTNGQCIDYNLVCNKYPDCADESDE 3242
Query: 120 ISNRHSILVADLEEKGKDHRAQDIVVSGL-DLVEGLAYDWIGGHIYWLDSRLNRIEVCDE 178
++ + A +E H+ D + D EG G +D L + C +
Sbjct: 3243 PAHCNVDECAKVEINQCGHKCVDTLTGYYCDCNEGYKLLADGKACADVDECLEQPGACSQ 3302
Query: 179 NGTNR------------IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226
+ +N D T R + P WL +T+ + + +DG
Sbjct: 3303 HCSNTPGGFYCKCDETYYERQNDEHTCKRKDKIPP-----WLIFTN---KYYVRNMSVDG 3354
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI---------DCKSLEIKTNVNYST 277
++ ++ + L DI +YF D I D E + + + +
Sbjct: 3355 -HQYNLMHQDLMNVVALDFDIREEYMYFCDVTAKTIFRAKYGEADDEMPPEREAVIRHDS 3413
Query: 278 ----------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGML 327
+ RKLYW+D + + + +DGS L SG + + A+ + G+
Sbjct: 3414 HGLEGIAIDWVGRKLYWLDRHSKNLDV----SELDGSKRKTLRSG-VVDPRAIVVHPGIG 3468
Query: 328 YYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFA 385
Y L++T W I ++GMDGSN S I++ I WPN L++D T R+Y+A
Sbjct: 3469 Y---------LYFTSWHLQAYIAKMGMDGSNFSRILNWNDGIAWPNALSIDYFTDRIYWA 3519
Query: 386 DSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYS 439
D+ LD+I + + +G R V L G AL L + +Y+S
Sbjct: 3520 DAHLDYIAYADLEGRHRHTV------------LSGSKVPHVFALSLFDDYIYWS 3561
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGSN +LV L + R L+W D+G++PRI + +DGS +
Sbjct: 2300 LDGSNRKVLVKTTTDAPRELAVN---------PIKRLLYWIDYGQHPRIGKALLDGSKWT 2350
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
++++ I P LT+D+ T +Y+ DSKLD I +Y+G R ++I DL
Sbjct: 2351 PLVTSGISLPRDLTIDMQTHDIYWVDSKLDTIQKISYNGANR-KIIRRDL 2399
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+ Y +K+YW D N I N+DGS ++ + A+ LD NG L+++
Sbjct: 2596 IAYDWTQQKIYWTDSSNN----SIYAMNLDGSELVMIARVERPRAIVLDPCNGTLFFTD- 2650
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
W +G + +I R M GS + I+ + P+GL +D RR+Y+ D+ + I
Sbjct: 2651 -------WGRFGTSGKIFRTTMAGSLKRAIVDKDLSQPSGLAIDYDERRLYWTDAVREKI 2703
Query: 393 DFCNYDGTGRQQVI 406
+ + DG R+ ++
Sbjct: 2704 ERSDLDGQNRELLV 2717
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 130/343 (37%), Gaps = 80/343 (23%)
Query: 70 DMNECEQ--PGYCSQMC-----------TNTKGSYICSCNEGYVLEYDNHTCKAINHSAA 116
D N C G C Q+C T+ ++ C C G L D C+ +N
Sbjct: 2459 DTNPCAHLGNGGCDQLCFSFPPDGGASGTSGGRNFRCECATGK-LSADERKCEVVNE--- 2514
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-NRIEV 175
+L+ + R I +L+ + ++ L V GL +D+ + + R +I
Sbjct: 2515 YLVFATRTEIRAVNLDPHSTE--VPFTPLTNLTNVVGLDFDFAHNRMLYTQIRPWAKIAY 2572
Query: 176 CDEN--GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
N G + I + + P G+ D + + ++WTD N I + +DGS ++
Sbjct: 2573 TKANKPGHDDITVVLNKGINPEGIAYDWT--QQKIYWTDSSNN-SIYAMNLDGS--ELVM 2627
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
++ P + LD ++F D W G G
Sbjct: 2628 IARVERPRAIVLDPCNGTLFFTD---------------------------W---GRFGTS 2657
Query: 294 LKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
KI + M GS +V L + LA+D + R L+WTD +IER
Sbjct: 2658 GKIFRTTMAGSLKRAIVDKDLSQPSGLAIDYDE-----------RRLYWTD-AVREKIER 2705
Query: 352 IGMDGSNRSTIISTKIYWPNGLTL--------DIATRRVYFAD 386
+DG NR +++ IY P +T+ D+ R VY A+
Sbjct: 2706 SDLDGQNRELLVAATIY-PFAITVFRNYIYWTDLQLRGVYRAE 2747
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 94/248 (37%), Gaps = 73/248 (29%)
Query: 80 CSQMC---TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
C +C + Y C C G+ L + + I FL++ I+ DL G
Sbjct: 1831 CQHLCLLSPSAPEGYSCKCRPGFKLLSEG---RCIEEENPFLMVVKGTQIV--DLPLNGG 1885
Query: 137 DHRAQDIV-VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-----------------E 178
D RA + V G++ GL +D G +YW+ R + E C E
Sbjct: 1886 DARAGALAPVIGIESSTGLDFDRKGETLYWVQGREDDDENCTIYTTPYGGGNKTLFLGIE 1945
Query: 179 NGT-------------------NR------------------IVLAKD----NITQPRGM 197
NG NR I+LA D ++++P+ +
Sbjct: 1946 NGIVGAPYTIAFDWLGRNLYIGNRVASNIEAVRVDGKQKYRTIILANDGYPNSVSRPKQI 2005
Query: 198 MLDPSPGTRWLFWTDWG--ENP-RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
LDP+ G LFW D G E P +I R+ M+G N ++ + P L +D + VY+
Sbjct: 2006 ALDPTEGK--LFWIDEGVLEVPIKIGRVDMNGQN-PIVVFQEFAHPESLAVDTEKKMVYY 2062
Query: 255 ADSKLDFI 262
+ S I
Sbjct: 2063 SASNPAVI 2070
>gi|194890512|ref|XP_001977327.1| GG18978 [Drosophila erecta]
gi|190648976|gb|EDV46254.1| GG18978 [Drosophila erecta]
Length = 4502
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/377 (53%), Positives = 248/377 (65%), Gaps = 54/377 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V++RCVN+T VCD DCPNG+DEG GCDLAEC+H+ G CS+ C TP GALC CPPG
Sbjct: 1179 VSERCVNITSVCDDTPDCPNGSDEGEGCDLAECEHQAGQCSSFCQKTPNGALCVCPPGSE 1238
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
+ D TC D NEC+ PG CSQ CTNTKGSY CSC +GYVLE + HTCKA+NH+AAFLII
Sbjct: 1239 IGEDGYTCIDSNECDPPGLCSQQCTNTKGSYFCSCTDGYVLEPNKHTCKAVNHTAAFLII 1298
Query: 121 SNRHSILVADLEEKG-------------------------------------KDHRAQDI 143
SNRHSILVADL+E+G + Q+I
Sbjct: 1299 SNRHSILVADLKEQGLERVPIIVENVVATASNMHTGTIFWSDMKLKKISRLDRGMEPQEI 1358
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ +GLDLVEGLAYDWI ++YWLDS+LN IEV ENG+NR+VL ++NITQPRGM +DPSP
Sbjct: 1359 INTGLDLVEGLAYDWIAQNLYWLDSKLNTIEVSAENGSNRLVLVRENITQPRGMCIDPSP 1418
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G RW+FWTDWGENPR+ERIGMDG+ R TII+TKIYWPNGLTLDIAT+RVYFADSKLDFID
Sbjct: 1419 GARWIFWTDWGENPRVERIGMDGTMRKTIINTKIYWPNGLTLDIATKRVYFADSKLDFID 1478
Query: 264 ------CKSLEIKTNVNY-------STIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
++ + +Y S LYW D N V + G N ++ V
Sbjct: 1479 FCYYNGTGRQQVLASSHYLLHPHSLSLFEDTLYWTDRQLNRV---LSANKFRGKNQTV-V 1534
Query: 311 SGQLYEALALDLENGML 327
S + + L++ + + L
Sbjct: 1535 SHLISQPLSIHVHHASL 1551
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 153/314 (48%), Gaps = 52/314 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C++ + VC+ DC + +DE C++ EC K + C + C T G C C G L
Sbjct: 2955 QCIDYSLVCNKYPDCADESDEPAHCNVNECAKVEINQCGHKCVDTLTGYYCDCNEGYKLL 3014
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYV-LEYDNHTCKAINHSAAFLII 120
D C D++EC EQPG CSQ C+NT G + C C+E Y + D HTCK + +LI
Sbjct: 3015 ADGKACADVDECLEQPGACSQHCSNTPGGFYCKCDETYYERQNDEHTCKRKDTIPPWLIF 3074
Query: 121 SNRHSILVADLEEKGKDHRAQDIV-VSGLDL----------------------------- 150
+N++ + ++ + QD++ V LD
Sbjct: 3075 TNKYYVRNMSVDGHQYNLMHQDLMNVVALDFDIREQYMYFCDVTAKTIFRAKYGEADDEL 3134
Query: 151 --------------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+EG+A DW+G +YWLD ++V + +GT R L + + PR
Sbjct: 3135 PPEREAVIRHDSHGLEGIAIDWVGRKLYWLDRHSKNLDVSELDGTKRKTL-RSGVVDPRA 3193
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYF 254
+++ PG +L++T W I ++GMDGSN S I+ + I WPN L++D T R+Y+
Sbjct: 3194 IVV--HPGIGYLYFTSWHLQAYIAKMGMDGSNFSRILNWNDGIAWPNALSIDYFTDRIYW 3251
Query: 255 ADSKLDFIDCKSLE 268
AD+ LD+I LE
Sbjct: 3252 ADAHLDYIAYADLE 3265
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 130/514 (25%), Positives = 225/514 (43%), Gaps = 88/514 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C+ +++CDGK DC +G+DE C +A C C C P+ G +C C PG+ L+
Sbjct: 121 KCILKSQLCDGKRDCEDGSDEETNCSIASCPALS--CEFKCGPSLTGGVCYCKPGQSLAP 178
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVL------------------EYDN 105
D+ TC D++EC + G+C Q+CTNT GSY C C +GY L +D
Sbjct: 179 DNRTCVDLDECAEWGHCDQLCTNTLGSYTCQCAQGYTLINDSKCIAPDANNLQLIFAHDR 238
Query: 106 HTCKAINHSAAFLIISN------------RHSILVADLEEKGKDH---RAQDIVVSGLDL 150
+ + H + +++N R+++ +D++ + AQ+ VS D
Sbjct: 239 AIMRMLPHGSEPKVLANATAAAGVTFHYARNTLYWSDIKTRKVQSLPLDAQNKAVSPFDQ 298
Query: 151 V-------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
LA DW+G IY D +I+V + +G V+ N+T P + LDP+
Sbjct: 299 TLPGTWAPVALAVDWVGDKIYVADLVGQKIDVFELSGQWHAVVLGSNLTSPADLALDPTA 358
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +F D G+ + R MDG++ +I+S Y +G+T+DI ++RV++ DS LD+I+
Sbjct: 359 GL--MFVADGGQ---VLRAHMDGTHARSIVSEAAYKASGVTVDIISKRVFWCDSLLDYIE 413
Query: 264 C------------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+ ++ + + +++W D G+ + + K +G SI V+
Sbjct: 414 SVDYEGAHRVMVLRGQQVPSPSRLALFENRIFWTDATKQGI-MSVDK--FEGP-TSIQVT 469
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
Y+A + G++ L R NP G G N I++ P
Sbjct: 470 ---YKAKDIREPKGIIAVHALSQPRV-------SNPCGNNNG--GCNHMCIVTAVKGAPT 517
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALA--- 428
GL A Y ++ L + QQ + ++E + D +P ++
Sbjct: 518 GLGFRCACSTGYQLETDLKLCKPVSEFLMYSQQRFIKGKVLEPVIEGFSDAIMPVVSRRA 577
Query: 429 ------LDLENGMLYYSTEGAEFLKTPLFCITRN 456
D + +YYS + L+ ++ + RN
Sbjct: 578 RFVGLDFDARDEFIYYS----DVLQDVIYRVHRN 607
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 170/429 (39%), Gaps = 104/429 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHP-TPLGALCTCPPGEIL 61
C+ ++VCD DC + +DE + C G C + CH T G +CTC PG I+
Sbjct: 3827 HCIERSQVCDFSDDCEDASDELGCHHTSSCSEANRGGCQHHCHNLTDGGYICTCYPGYII 3886
Query: 62 SNDSVT-CQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVL------------------ 101
+ D+ C D++EC + CS C N G+Y CSC EG+ L
Sbjct: 3887 AADNKKKCSDVDECLTRQHTCSHQCHNLNGTYSCSCREGFHLTDGASGVCRAEKEDVVLV 3946
Query: 102 ----------------EYD----NHTCKAINHSAAFLII--------SNRHSILVADLEE 133
E+D +A+++ A II + + S +V ++
Sbjct: 3947 FANGQEIRGLDLQKREEFDVIAAEKRIEALDYDAQQQIIFWADSYDKTIKRSYMVNAIDG 4006
Query: 134 KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD------SRLNRIEVCDENGTNRIVLA 187
+ K AQD+ + G +A DW+ ++YW + R+ V +G R +
Sbjct: 4007 RAKIGFAQDLNMKGGSKPTAVAVDWLASNLYWTEMDRTGSKPRGRVMVAKTDGRYRRSIV 4066
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P + ++P G ++W+D G P+IE MDGS R +I+ I P GLT+D
Sbjct: 4067 NAGLEVPTSIAVNPQLGR--IYWSDAGSAPKIEVSWMDGSKRRPLITELIRHPAGLTIDY 4124
Query: 248 ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307
+ + +YW+D N I DGS
Sbjct: 4125 SQDHI-----------------------------IYWVDTKLNA----IESMRADGSRRK 4151
Query: 308 ILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 366
+V G QL ++LDL +++ T D GE R ++ G ++
Sbjct: 4152 AIVRGDQLRHPVSLDLFESNMFWMT---------RDTGELVRQDKFGR---GVQVVLHRN 4199
Query: 367 IYWPNGLTL 375
+ P+GL +
Sbjct: 4200 LVNPSGLKV 4208
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 88/165 (53%), Gaps = 24/165 (14%)
Query: 141 QDIVVSGL--DLVEGLAYDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRG 196
Q +V G+ + + GL DW+ G++Y+ + N +EVC +G+NR VL K PR
Sbjct: 1992 QHVVKDGIGSNGIRGLTIDWVAGNMYFTNVYPHENYVEVCWLDGSNRKVLVKTTTDAPRE 2051
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ ++P R L+W D+G++PRI + +DGS + ++++ I P LT+D+ T +Y+ D
Sbjct: 2052 LAVNPI--KRLLYWIDYGQHPRIGKALLDGSKWTPLVTSGISLPRDLTIDMQTHDIYWVD 2109
Query: 257 SKLDFIDCKSLEIKTN-VNYSTIFRKL-------------YWIDE 287
SKLD I +I N VN I R L YW+D
Sbjct: 2110 SKLDTIQ----KISYNGVNRKVIRRDLPNPMGIAVYLNDVYWVDR 2150
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 52/240 (21%)
Query: 78 GYCSQMC--TNTKGS-----YICSCNEGYVLEYDNHTCKAINH----------------- 113
G C+ MC T KG+ + C+C+ GY LE D CK ++
Sbjct: 501 GGCNHMCIVTAVKGAPTGLGFRCACSTGYQLETDLKLCKPVSEFLMYSQQRFIKGKVLEP 560
Query: 114 ------SAAFLIISNRHSILVADLEEKG--------------KDHR---AQDIVVSGLDL 150
A ++S R + D + + + HR ++IV++ +
Sbjct: 561 VIEGFSDAIMPVVSRRARFVGLDFDARDEFIYYSDVLQDVIYRVHRNGTGREIVLASQNE 620
Query: 151 -VEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
VEGLA DW ++Y++DSR + V N T+R L K N+ +PR +++ P+ G ++
Sbjct: 621 GVEGLAVDWASKNLYYIDSRKGTLNVLSTRNVTHRRTLLK-NLKRPRAIVVHPNRG--FI 677
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
F+++W I R DGS + + WPNGL++D RVY+ D+ LD + +L+
Sbjct: 678 FFSEWDRPANITRANTDGSGLLVFKNVTLGWPNGLSIDFKEDRVYWCDALLDHVQHANLD 737
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 88/185 (47%), Gaps = 42/185 (22%)
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EG+AYDW IYW DS N I + +G+ +++A+ + +PR ++LDP GT LF+T
Sbjct: 2327 EGIAYDWTQQKIYWTDSSNNSIYAMNLDGSELVMIAR--VERPRAIVLDPCNGT--LFFT 2382
Query: 212 DWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
DWG + +I R M GS + I+ + P+GL +D RR
Sbjct: 2383 DWGRFGTSGKIFRTTMAGSLKRAIVDKDLSQPSGLAIDYDERR----------------- 2425
Query: 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLY 328
LYW D V KI ++++DG N +LV +Y A+ + +Y
Sbjct: 2426 -------------LYWTD----AVREKIERSDLDGQNRELLVGATIY-PFAITVFRNYMY 2467
Query: 329 YSTLK 333
++ L+
Sbjct: 2468 WTDLQ 2472
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 108/474 (22%), Positives = 185/474 (39%), Gaps = 89/474 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
RC+N +CD DC +G DEG C+ K+ CS TC + + N
Sbjct: 2872 RCINKGWICDHDNDCGDGTDEGKFCN-----SKYKTCS--------AQEFTCQNFKCIRN 2918
Query: 64 DSVTCQDMNEC----EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI 119
S C ++C ++ G + T +G + +C G ++Y K + +
Sbjct: 2919 QS-RCDGEDDCGDHSDEVGCTKENITCPQGQF--ACTNGQCIDYSLVCNKYPDCADESDE 2975
Query: 120 ISNRHSILVADLEEKGKDHRAQDIVVSGL-DLVEGLAYDWIGGHIYWLDSRLNRIEVCDE 178
++ + A +E H+ D + D EG G +D L + C +
Sbjct: 2976 PAHCNVNECAKVEINQCGHKCVDTLTGYYCDCNEGYKLLADGKACADVDECLEQPGACSQ 3035
Query: 179 NGTNR------------IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226
+ +N D T R + P WL +T+ + + +DG
Sbjct: 3036 HCSNTPGGFYCKCDETYYERQNDEHTCKRKDTIPP-----WLIFTN---KYYVRNMSVDG 3087
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI---------DCKSLEIKTNVNYST 277
++ ++ + L DI + +YF D I D E + + + +
Sbjct: 3088 -HQYNLMHQDLMNVVALDFDIREQYMYFCDVTAKTIFRAKYGEADDELPPEREAVIRHDS 3146
Query: 278 ----------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGML 327
+ RKLYW+D + + + +DG+ L SG + + A+ + G+
Sbjct: 3147 HGLEGIAIDWVGRKLYWLDRHSKNLDV----SELDGTKRKTLRSG-VVDPRAIVVHPGIG 3201
Query: 328 YYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFA 385
Y L++T W I ++GMDGSN S I++ I WPN L++D T R+Y+A
Sbjct: 3202 Y---------LYFTSWHLQAYIAKMGMDGSNFSRILNWNDGIAWPNALSIDYFTDRIYWA 3252
Query: 386 DSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYS 439
D+ LD+I + + +G R V L G AL L + +Y+S
Sbjct: 3253 DAHLDYIAYADLEGRHRHTV------------LSGSKVPHVFALSLFDDYIYWS 3294
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGSN +LV L + R L+W D+G++PRI + +DGS +
Sbjct: 2033 LDGSNRKVLVKTTTDAPRELAVN---------PIKRLLYWIDYGQHPRIGKALLDGSKWT 2083
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
++++ I P LT+D+ T +Y+ DSKLD I +Y+G R +VI DL
Sbjct: 2084 PLVTSGISLPRDLTIDMQTHDIYWVDSKLDTIQKISYNGVNR-KVIRRDL 2132
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+ Y +K+YW D N I N+DGS ++ + A+ LD NG L+++
Sbjct: 2329 IAYDWTQQKIYWTDSSNN----SIYAMNLDGSELVMIARVERPRAIVLDPCNGTLFFTD- 2383
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
W +G + +I R M GS + I+ + P+GL +D RR+Y+ D+ + I
Sbjct: 2384 -------WGRFGTSGKIFRTTMAGSLKRAIVDKDLSQPSGLAIDYDERRLYWTDAVREKI 2436
Query: 393 DFCNYDGTGRQQVI 406
+ + DG R+ ++
Sbjct: 2437 ERSDLDGQNRELLV 2450
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 134/336 (39%), Gaps = 75/336 (22%)
Query: 80 CSQMC---TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
C +C + + Y C C G+ L + + I FL++ I+ DL G
Sbjct: 1564 CQHLCLLSPSAQEGYSCKCKPGFKLLSEG---RCIEEENPFLMVVKGTQIV--DLPLNGG 1618
Query: 137 DHRAQDIV-VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD------ENGTNRIVLAKD 189
D RA + V G++ GL +D G +YW+ R + E C G + L +
Sbjct: 1619 DARAGALAPVIGIESSTGLDFDRKGETLYWVQGREDDDENCTIYTTPYGGGNKTLFLGTE 1678
Query: 190 N--ITQPRGMMLDPSPGTRWLFWTDWGEN---PRIERIGMDGSNR-STIISTKIYWPNGL 243
N + P + D WL + N IE + +DG + TII +PN +
Sbjct: 1679 NGIVGAPYTIAFD------WLGRNLYIGNRVASNIEAVRVDGKQKYRTIILANDGYPNSV 1732
Query: 244 TLDIATRRVYF--ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ +++ D KL +ID LE+ P+KIG+ +M
Sbjct: 1733 S---RPKQIALDPTDGKLFWIDEGVLEV-----------------------PIKIGRVDM 1766
Query: 302 DGSNASILVSGQLY-EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG-MD-GSN 358
+G N ++ + E+LA+D + MLYYS NP + IG MD +
Sbjct: 1767 NGQNPIVVFEKFAHPESLAVDTDKKMLYYS-------------ASNPAV--IGSMDYNGD 1811
Query: 359 RSTIISTKIYWP--NGLTLDIATRRVYFADSKLDFI 392
T+I+ K P +L I R+Y+ D + I
Sbjct: 1812 DHTLIAMKDSHPMAKPKSLGILDHRLYYLDPLYERI 1847
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 130/343 (37%), Gaps = 80/343 (23%)
Query: 70 DMNECEQ--PGYCSQMC----------TNTKG-SYICSCNEGYVLEYDNHTCKAINHSAA 116
D N C G C Q+C T G ++ C C G L D C+ +N
Sbjct: 2192 DTNPCAHLGNGGCDQLCFSFPPDGGATAGTSGRNFRCECATGK-LGADERKCEVVNE--- 2247
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-NRIEV 175
+L+ + R I +L+ + + ++ L V GL +D+ + + R +I
Sbjct: 2248 YLVFATRTEIRAVNLDPQSTE--VPFTPLTNLTNVVGLDFDFAHNRMLYTQIRPWAKIAY 2305
Query: 176 CDEN--GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
N G + I + + P G+ D + + ++WTD N I + +DGS ++
Sbjct: 2306 TKANKPGHDDITVVLNKGINPEGIAYDWT--QQKIYWTDSSNN-SIYAMNLDGS--ELVM 2360
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
++ P + LD ++F D W G G
Sbjct: 2361 IARVERPRAIVLDPCNGTLFFTD---------------------------W---GRFGTS 2390
Query: 294 LKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
KI + M GS +V L + LA+D + R L+WTD +IER
Sbjct: 2391 GKIFRTTMAGSLKRAIVDKDLSQPSGLAIDYDE-----------RRLYWTD-AVREKIER 2438
Query: 352 IGMDGSNRSTIISTKIYWPNGLTL--------DIATRRVYFAD 386
+DG NR ++ IY P +T+ D+ R VY A+
Sbjct: 2439 SDLDGQNRELLVGATIY-PFAITVFRNYMYWTDLQLRGVYRAE 2480
>gi|195049411|ref|XP_001992716.1| GH24913 [Drosophila grimshawi]
gi|193893557|gb|EDV92423.1| GH24913 [Drosophila grimshawi]
Length = 4576
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/377 (54%), Positives = 245/377 (64%), Gaps = 54/377 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
VA+RCVN+T VCD DCPNGADEG GCDLAEC H+ G CS+ C TP GALC CPPG
Sbjct: 1261 VAERCVNITSVCDDTMDCPNGADEGEGCDLAECAHQTGQCSSFCQKTPSGALCVCPPGSE 1320
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
+ D TC D NEC+ PG CSQ CTNTKGSY CSC GYVL + HTCKA+NH+AAFLII
Sbjct: 1321 IGQDGFTCVDTNECDPPGLCSQECTNTKGSYFCSCTPGYVLGPNKHTCKAVNHTAAFLII 1380
Query: 121 SNRHSILVADLEEKGK-----------------------------------DH--RAQDI 143
SNRHSILVADL+E+G DH Q+I
Sbjct: 1381 SNRHSILVADLKEQGLERVPIIVENVVATASNMHTGTIFWSDMKLKKISRLDHGMEPQEI 1440
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ +GLDLVEGLAYDWI ++YWLDS+LN IEV ENG+NR+VL ++NITQPRGM +DPSP
Sbjct: 1441 INTGLDLVEGLAYDWIAKNLYWLDSKLNTIEVSAENGSNRLVLVRENITQPRGMCIDPSP 1500
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
R++FWTDWGENPR+ERIGMDG+ R TII+TKIYWPNGLTLDIAT+RVYFADSKLDFID
Sbjct: 1501 EARFIFWTDWGENPRVERIGMDGTMRKTIINTKIYWPNGLTLDIATKRVYFADSKLDFID 1560
Query: 264 ------CKSLEIKTNVNY-------STIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
++ + +Y S LYW D N V + G N ++ V
Sbjct: 1561 FCYYNGTGRQQVLASSHYLLHPHSLSLFEDTLYWTDRQLNRV---LSANKFRGKNQTV-V 1616
Query: 311 SGQLYEALALDLENGML 327
S + + L++ + + L
Sbjct: 1617 SHLISQPLSIHVHHASL 1633
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 199/462 (43%), Gaps = 106/462 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C++ + VC+ DC + +DE C++ EC K + C + C T G C C G L
Sbjct: 3032 QCIDYSLVCNKVADCTDESDEPAHCNVDECAKVEINQCGHKCVDTLTGYYCDCNEGYKLL 3091
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYV-LEYDNHTCKAINHSAAFLII 120
D C D++EC EQPG CSQ C+NT GS+ C C+E Y + D HTCK ++ +LI
Sbjct: 3092 ADGKACADVDECLEQPGACSQHCSNTPGSFYCKCDETYYERQNDEHTCKRKDNIPPWLIF 3151
Query: 121 SNRHSILVADLEEKGKDHRAQDIV-VSGLDL----------------------------- 150
+N++ + ++ + QD++ V LD
Sbjct: 3152 TNKYYVRNMSVDGHQYNLMHQDLMNVVALDFDIKDQYMYFCDVTAKTIFRAKYSDASVDL 3211
Query: 151 --------------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+EG+A DW+G +YWLD ++V + +GT R L + + PR
Sbjct: 3212 PTEREAVIRHDSHGLEGIAIDWVGRKLYWLDRHSKNLDVSELDGTKRKTL-RSGVVDPRA 3270
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYF 254
+++ PG +L++T W I ++GMDGSN + I+ + I WPN L++D T R+Y+
Sbjct: 3271 IVV--HPGIGYLYFTSWHLQAYIAKMGMDGSNFTRILNWNDGIAWPNALSIDYFTDRIYW 3328
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG-Q 313
AD+ LD+ I +++G + I++SG
Sbjct: 3329 ADAHLDY----------------------------------IAYTDLEGRHRHIVLSGNS 3354
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
+ AL L + +Y W+DW + G+N T++ + P L
Sbjct: 3355 VPHVFALSLFDDFIY-----------WSDWNLKAIVRANKFHGANY-TVLRNTTHRPYDL 3402
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFT 415
++ R +L + + C + G + LI E T
Sbjct: 3403 HINHPLR-------QLPYTNPCGTNNGGCSHLCLIAPPPEST 3437
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 164/344 (47%), Gaps = 61/344 (17%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
A +C+ +++CDGK DC +G+DE C +A C C C P+ G +C C PG+ L
Sbjct: 203 APKCILKSQLCDGKRDCEDGSDEETACSIASCPALS--CEFKCGPSLTGGVCYCRPGQSL 260
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+ D+ TC D++EC + G+C Q+CTNT GSY C C +GY L + C A + + LI +
Sbjct: 261 APDNRTCIDLDECAEWGHCDQLCTNTPGSYTCQCAQGYTL-INESKCIAPDANNLQLIFA 319
Query: 122 N-------------------------------RHSILVADLEEKGKDHRAQDIVVSGLDL 150
+ R+++ +D++ + D++ S +
Sbjct: 320 HDRAIMRMFAHDSDPKVLANATAAAGVAFHYARNTLYWSDIKTRKVQSLPLDVLNSAVAP 379
Query: 151 VE----------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++ LA DW+G IY D +I+V + +G V+ N+T P + LD
Sbjct: 380 LDQTLPGTWAPVALAVDWVGDKIYVADLVGQKIDVFELSGHWHAVVLGSNLTSPADLALD 439
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +F D G+ + R MDG++ +I+S Y +G+T+DI +RV++ DS LD
Sbjct: 440 PTAGL--MFVADGGQ---VLRAHMDGTHARSIVSEAAYKASGVTVDIIGKRVFWCDSLLD 494
Query: 261 FIDC------------KSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
+I+ + ++ + + ++YW D G+
Sbjct: 495 YIESVDYEGGQRVMVLRGQQVPSPSRLALFENRIYWTDATKQGI 538
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 166/430 (38%), Gaps = 106/430 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHK-FGLCSNTCHP-TPLGALCTCPPGEIL 61
C+ +VCD DC + +DE + C + G C + CH T G +CTC PG I+
Sbjct: 3904 HCIERAQVCDFSDDCGDASDELGCHHTSSCSEQNRGGCQHHCHNLTDGGYICTCYPGYII 3963
Query: 62 SNDSVT-CQDMNECEQPGY-CSQMCTNTKGSYICSCNEGYVL-EYDNHTCKAINHSAAFL 118
+ D+ C D++EC + CS C N G+Y CSC +G+ L + + CKA L
Sbjct: 3964 APDNKKRCADVDECATRQHTCSHQCHNMNGTYSCSCRDGFHLSDGSSGVCKA-EKDDVIL 4022
Query: 119 IISNRHSILVADLEEK-------------------------------------------- 134
+ +N I DL++K
Sbjct: 4023 VFANGPEIRGLDLQKKEEFDVIAAEKRIEALDYDAQQQIVFWADSYDKTIKRSYMVNAAD 4082
Query: 135 --GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD------SRLNRIEVCDENGTNRIVL 186
K AQD+ + G +A DW+ ++YW + R+ V +G R +
Sbjct: 4083 GQAKIGFAQDLNMKGGSKPTAVAVDWLASNLYWTEVDRTGSKPRGRVMVAKTDGRYRRSI 4142
Query: 187 AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 246
+ P + ++P G ++W D G P+IE MDGS R +I+ +I P GLT+D
Sbjct: 4143 VNAGLEVPTSIAVNPQLGR--IYWADAGSAPKIEVSWMDGSKRRPLITEQIRHPAGLTID 4200
Query: 247 IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
A + +YW+D N I DGS
Sbjct: 4201 YAQDHI-----------------------------IYWVDTKLNA----IESMRADGSRR 4227
Query: 307 SILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
+V G QL ++LDL +++ T D GE R ++ G ++
Sbjct: 4228 KAIVKGDQLRHPVSLDLFESNMFWVT---------RDTGELLRQDKFGR---GVQVVVHR 4275
Query: 366 KIYWPNGLTL 375
+ P+GL +
Sbjct: 4276 NLVNPSGLKV 4285
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 131/316 (41%), Gaps = 92/316 (29%)
Query: 70 DMNECEQ--PGYCSQMC------TNTKGSYICSCNEGYVLEYDNHTCKAIN--------- 112
D N C Q G C Q+C +T +Y C C G L DNHTC+ +N
Sbjct: 2274 DNNPCAQLGNGGCDQLCFSFPPEPSTAKNYRCDCATGK-LGADNHTCETVNEYLVFATRT 2332
Query: 113 ---------HS--AAFLIISNRHSILVADLEEKGK---------------------DHRA 140
HS F +SN +++ D + G H
Sbjct: 2333 EIRAVNLNPHSTEVPFTPLSNLTNVVGVDFDFAGNRMLYTQIRPWAKIAYTQANKPSHSD 2392
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+V++ EG+AYDW IYW DS N I + GT +++A+ + +PR ++LD
Sbjct: 2393 ITVVLNKGINPEGIAYDWTQSKIYWTDSSNNSIYAMNLVGTELVMIAR--VERPRAIVLD 2450
Query: 201 PSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
P GT LF+TDWG + +I R M GS + I+ ++ P+GL +D R
Sbjct: 2451 PCNGT--LFFTDWGRFGTSGKIFRTTMAGSLKRAIVDKELSQPSGLAIDYDDR------- 2501
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KLYW D V KI +A++DG N +LV+ +Y
Sbjct: 2502 -----------------------KLYWTD----AVREKIERADLDGRNRELLVAATIY-P 2533
Query: 318 LALDLENGMLYYSTLK 333
A+ + +Y++ ++
Sbjct: 2534 FAITVFRNYIYWTDVQ 2549
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 24/165 (14%)
Query: 141 QDIVVSGL--DLVEGLAYDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRG 196
Q +V G+ + + GL DW+ G++Y+ + N +EVC +G+NR VL K PR
Sbjct: 2073 QHVVKDGIGSNGIRGLTIDWVAGNMYFTNVYPHENYVEVCWLDGSNRKVLVKTTNDAPRE 2132
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ ++P R L+W D+G++PRI + +DGS ++++ I P LT+D+ T V++ D
Sbjct: 2133 LAVNPI--KRLLYWIDYGQHPRIGKAMLDGSKWQPLVTSGISLPRDLTIDMQTHDVFWVD 2190
Query: 257 SKLDFIDCKSLEIKTN-VNYSTIFRKL-------------YWIDE 287
SKLD I +I N VN I R L YW+D
Sbjct: 2191 SKLDTIQ----KISYNGVNRKVIRRDLPNPMGIAIFRNDVYWVDR 2231
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 52/240 (21%)
Query: 78 GYCSQMC--TNTKGS-----YICSCNEGYVLEYDNHTCKAINH----------------- 113
G C+ MC T KG+ + C+C+ GY L+ D CK +
Sbjct: 585 GGCNHMCIVTAVKGAPTGLGFRCACHTGYQLQTDLKNCKLVREFLMYSQQRFIKGKVLEP 644
Query: 114 ------SAAFLIISNRHSILVADLEEKG--------------KDHR---AQDIVVSGLDL 150
A ++S R + D + + + HR ++IV++ +
Sbjct: 645 VIEGFSDAILPVVSRRARFVGLDFDARDEFIYYSDVLQDVIYRVHRNGTGREIVLASQNE 704
Query: 151 -VEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
VEGLA DW ++Y++DSR + V N T+R L K N+ +PR +++ P+ G ++
Sbjct: 705 GVEGLAVDWASKNLYYIDSRKGTLNVLSTRNVTHRRTLLK-NLKRPRAIVVHPNRG--YI 761
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
F+++W I R DG+ + + WPNGL++D RVY+ D+ LD + +L+
Sbjct: 762 FFSEWDRPANITRANTDGTGLLVFRNVTLGWPNGLSIDFKEDRVYWCDALLDHVQHANLD 821
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 36/198 (18%)
Query: 251 RVYFADSKLDFIDCKSLEIKTN------VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
R ++D+ +D + I+ + + + RKLYW+D + + + +DG+
Sbjct: 3201 RAKYSDASVDLPTEREAVIRHDSHGLEGIAIDWVGRKLYWLDRHSKNLDV----SELDGT 3256
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
L SG + + A+ + G+ Y L++T W I ++GMDGSN + I++
Sbjct: 3257 KRKTLRSG-VVDPRAIVVHPGIGY---------LYFTSWHLQAYIAKMGMDGSNFTRILN 3306
Query: 365 --TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I WPN L++D T R+Y+AD+ LD+I + + +G R V + N
Sbjct: 3307 WNDGIAWPNALSIDYFTDRIYWADAHLDYIAYTDLEGRHRHIV-------------LSGN 3353
Query: 423 GVP-ALALDLENGMLYYS 439
VP AL L + +Y+S
Sbjct: 3354 SVPHVFALSLFDDFIYWS 3371
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 135/350 (38%), Gaps = 89/350 (25%)
Query: 72 NECEQPGYCSQMC---TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILV 128
N C Q C +C + Y C C GY L + + I +L++ I+
Sbjct: 1639 NPCAQ-ARCQHLCLLSPSASEGYSCKCKPGYRLLSEG---RCIEEENPYLMVVKGTQIV- 1693
Query: 129 ADLEEKGKDHRAQDIV-VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
DL G D RA + V G++ GL +D G +YW+ R E DEN T
Sbjct: 1694 -DLPLNGGDARAGALAPVIGIESSTGLDFDRKGETLYWVQGR----EDDDENCTI----- 1743
Query: 188 KDNITQPRG-----MMLDPSPGTRWLFWT---DW-GEN--------PRIERIGMDGSN-- 228
T P G + LD G +T DW G N IE + +DG
Sbjct: 1744 ---FTTPYGGGNKTLFLDIDTGIVGAPYTIAFDWLGRNLYIGNRVASNIEAVRVDGKQKY 1800
Query: 229 RSTIIST-----KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLY 283
R+ I++ + P L LD + KL+
Sbjct: 1801 RTVILANDGSENSVSKPKQLVLDPSEG------------------------------KLF 1830
Query: 284 WIDEGGNGVPLKIGKANMDGSNASILVSGQLY-EALALDLENGMLYYSTLKCTRWLFWTD 342
WIDEG VP+KI + +M+G +A +L + E++ALD+E M+YYST
Sbjct: 1831 WIDEGVLEVPVKIARVDMNGQDARVLRKDLKHPESIALDIEKKMIYYST----------- 1879
Query: 343 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
+ I + +G + + I++ +L + R+Y+ D + I
Sbjct: 1880 -SHSASICSMDYNGEDHTIILNEDQAISRPRSLGVLDHRLYYLDPVYEKI 1928
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 19/125 (15%)
Query: 301 MDGSNASILV--SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSN 358
+DGSN +LV + LA++ R L+W D+G++PRI + +DGS
Sbjct: 2114 LDGSNRKVLVKTTNDAPRELAVN-----------PIKRLLYWIDYGQHPRIGKAMLDGSK 2162
Query: 359 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL-----MVE 413
++++ I P LT+D+ T V++ DSKLD I +Y+G R +VI DL +
Sbjct: 2163 WQPLVTSGISLPRDLTIDMQTHDVFWVDSKLDTIQKISYNGVNR-KVIRRDLPNPMGIAI 2221
Query: 414 FTNDL 418
F ND+
Sbjct: 2222 FRNDV 2226
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 12/134 (8%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+ Y K+YW D N I N+ G+ ++ + A+ LD NG L+++
Sbjct: 2406 IAYDWTQSKIYWTDSSNNS----IYAMNLVGTELVMIARVERPRAIVLDPCNGTLFFTD- 2460
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
W +G + +I R M GS + I+ ++ P+GL +D R++Y+ D+ + I
Sbjct: 2461 -------WGRFGTSGKIFRTTMAGSLKRAIVDKELSQPSGLAIDYDDRKLYWTDAVREKI 2513
Query: 393 DFCNYDGTGRQQVI 406
+ + DG R+ ++
Sbjct: 2514 ERADLDGRNRELLV 2527
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 20/128 (15%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA--LALDLENGMLYYSTLKCTRWL 338
K+Y D G KI + G ++++ L LALD G++
Sbjct: 401 KIYVADLVGQ----KIDVFELSGHWHAVVLGSNLTSPADLALDPTAGLM----------- 445
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
F D G+ + R MDG++ +I+S Y +G+T+DI +RV++ DS LD+I+ +Y+
Sbjct: 446 FVADGGQ---VLRAHMDGTHARSIVSEAAYKASGVTVDIIGKRVFWCDSLLDYIESVDYE 502
Query: 399 GTGRQQVI 406
G R V+
Sbjct: 503 GGQRVMVL 510
>gi|195393330|ref|XP_002055307.1| GJ18862 [Drosophila virilis]
gi|194149817|gb|EDW65508.1| GJ18862 [Drosophila virilis]
Length = 4631
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/377 (53%), Positives = 245/377 (64%), Gaps = 54/377 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V +RCVN+T VCD DCPNGADEG GCDLAEC+H+ G CS+ C TP GALC CPPG
Sbjct: 1317 VTERCVNITSVCDDTIDCPNGADEGEGCDLAECEHQTGQCSSFCQKTPNGALCVCPPGSE 1376
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
+ D TC D NEC+ PG CSQ CTNTKGSY CSC GYVL + HTCKA+NH+AAFLII
Sbjct: 1377 IGPDGFTCVDTNECDPPGLCSQQCTNTKGSYFCSCTPGYVLGPNKHTCKAVNHTAAFLII 1436
Query: 121 SNRHSILVADLEEKGK-----------------------------------DH--RAQDI 143
SNRHSILVADL+E+G DH Q+I
Sbjct: 1437 SNRHSILVADLKEQGLERVPIIVENVVATASNMHTGTIFWSDMKLKKISRLDHGMEPQEI 1496
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ +GLDLVEGLAYDWI ++YWLDS+LN IEV ENG+NR+VL ++NITQPRGM +DPSP
Sbjct: 1497 ITTGLDLVEGLAYDWIAQNLYWLDSKLNTIEVSAENGSNRLVLVRENITQPRGMCIDPSP 1556
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
R++FWTDWGENPR+ERIGMDG+ R TII+TKIYWPNGLTLDIAT+RVYFADSKLDFID
Sbjct: 1557 DARFIFWTDWGENPRVERIGMDGTMRKTIINTKIYWPNGLTLDIATKRVYFADSKLDFID 1616
Query: 264 ------CKSLEIKTNVNY-------STIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
++ + +Y S LYW D N V + G N ++ V
Sbjct: 1617 FCYYNGTGRQQVLASSHYLLHPHSLSLFEDTLYWTDRQLNRV---LSANKFRGKNQTV-V 1672
Query: 311 SGQLYEALALDLENGML 327
S + + L++ + + L
Sbjct: 1673 SHLISQPLSIHVHHASL 1689
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 201/462 (43%), Gaps = 106/462 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C++ + VC+ DC + +DE C++ EC K + C + C T G C C G L
Sbjct: 3087 QCIDYSLVCNKVADCTDESDEPAHCNVDECAKVEINQCGHKCVDTLTGYYCDCNEGYKLL 3146
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYV-LEYDNHTCKAINHSAAFLII 120
D C D++EC EQPG CSQ C+NT GS+ C C+E Y + D HTCK ++ +LI
Sbjct: 3147 ADGKACADVDECLEQPGACSQHCSNTPGSFYCKCDETYYERQNDEHTCKRKDNIPPWLIF 3206
Query: 121 SNRHSI----------------------LVADLEE--------------KGKDHRAQDIV 144
+N++ + L D++E + K A D V
Sbjct: 3207 TNKYYVRNMSVDGHQYNLMHQDLMNVVALDFDIKEQYMYFCDVTAKTIFRAKYSDANDDV 3266
Query: 145 VSGLDLV--------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ + V EG+A DW+G +YWLD ++V + +GT R L + + PR
Sbjct: 3267 PTEREAVIRHDSHGLEGIAIDWVGRKLYWLDRHSKNLDVSELDGTKRKTL-RSGVVDPRA 3325
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYF 254
+++ PG +L++T W I ++GMDGSN + I+ + I WPN L++D T R+Y+
Sbjct: 3326 IVV--HPGIGYLYFTSWHLQAYIAKMGMDGSNFTRILNWNDGIAWPNALSIDYFTDRIYW 3383
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG-Q 313
AD+ LD+ I +++G + I++SG
Sbjct: 3384 ADAHLDY----------------------------------IAYTDLEGRHRHIVLSGNS 3409
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
+ AL L + +Y W+DW + G+N T++ + P L
Sbjct: 3410 VPHVFALSLFDDFIY-----------WSDWNLKAIVRANKFHGANY-TVLRNTTHRPYDL 3457
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFT 415
++ R +L + + C + G + LI E T
Sbjct: 3458 HINHPLR-------QLPYTNPCGTNNGGCSHLCLIAPPPEST 3492
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 165/343 (48%), Gaps = 59/343 (17%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
A +C+ +++CDGK DC +G+DE C +A C C C P+ G +C C PG+ L
Sbjct: 262 APKCILKSQLCDGKRDCEDGSDEETACSIASCPALS--CEFKCGPSLTGGVCYCRPGQSL 319
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY------------------VLEY 103
+ D+ TC D++EC + G+C Q+CTNT GSY C C +GY + +
Sbjct: 320 AADNRTCVDLDECAEWGHCDQLCTNTPGSYTCQCAQGYRLMNASKCIAPDANNLQLIFAH 379
Query: 104 DNHTCKAINHSAAFLIISN------------RHSILVADLEEKGKDHRAQDIVVSGLDLV 151
D + H + +++N R+++ +D++ + D++ S + +
Sbjct: 380 DRAIMRMYAHDSEPKVLANATAAAGVAFHYARNTLYWSDIKTRKVQSLPLDVLNSAVAPL 439
Query: 152 E----------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+ LA DW+G IY D +I+V + +G V+ N+T P + LDP
Sbjct: 440 DQTLPGTWAPVALAVDWVGDKIYVADLVGQKIDVFELSGHWHAVVLGSNLTSPADLALDP 499
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
+ G +F D G+ + R MDG++ +I+S Y +G+T+DI ++RV++ DS LD+
Sbjct: 500 TSGL--MFVADGGQ---VLRAHMDGTHARSIVSEAAYKASGVTVDIISKRVFWCDSLLDY 554
Query: 262 IDC------------KSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
I+ + ++ + + ++YW D G+
Sbjct: 555 IESVDYEGGQRVMVLRGQQVPSPSRLALFENRIYWTDATKQGI 597
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 169/429 (39%), Gaps = 104/429 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKF-GLCSNTCHP-TPLGALCTCPPGEIL 61
C+ +VCD DC + +DE + C + G C + CH T G +CTC PG I+
Sbjct: 3959 HCIERAQVCDYSDDCGDASDELGCHHTSSCSEQSRGGCQHHCHNLTDGGYICTCYPGYII 4018
Query: 62 SNDSVT-CQDMNECEQPGY-CSQMCTNTKGSYICSCNEGYVL-EYDNHTCKA-------- 110
+ D+ C D++EC + CS C N G+Y CSC EG+ L + + CKA
Sbjct: 4019 APDNKKKCADVDECATRQHTCSHQCHNMNGTYSCSCREGFHLSDGASGVCKAEKEDVVLV 4078
Query: 111 -----------INHSAAFLIISN--------------------------RHSILVADLEE 133
+ F +I++ + S +V L+
Sbjct: 4079 FANGPEIRGLDLQKKEEFDVIASEKRIEALDYDAQQQIVFWADSYDKTIKRSYMVNALDG 4138
Query: 134 KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD------SRLNRIEVCDENGTNRIVLA 187
+ K AQD+ + G +A DW+ ++YW + R+ V +G R +
Sbjct: 4139 QAKIGFAQDLNMKGGSKPTAVAVDWLASNLYWTEVDRTGSKPRGRVMVAKTDGRYRRSIV 4198
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P + ++P G ++W D G P+IE MDGS R +I+ +I P GLT+D
Sbjct: 4199 NAGLEVPTSIAVNPQLGR--IYWADAGSAPKIEVSWMDGSKRRPLITEQIRHPAGLTIDY 4256
Query: 248 ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307
+ + +YW+D N I DGS
Sbjct: 4257 SQDHI-----------------------------IYWVDTKLNA----IESMRADGSRRK 4283
Query: 308 ILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 366
+V G QL ++LDL +Y+ T D GE R ++ G ++
Sbjct: 4284 AIVKGDQLRHPVSLDLFESNMYWVT---------RDTGELLRQDKF---GRGVQVVVHRN 4331
Query: 367 IYWPNGLTL 375
+ P+GL +
Sbjct: 4332 LVNPSGLKV 4340
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 42/209 (20%)
Query: 128 VADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
+A + H ++V+S EG+AYDW IYW DS N I + G+ +++A
Sbjct: 2435 IAYTQANKPSHSDINVVLSKGINPEGIAYDWTQNKIYWTDSSNNSIYAMNLVGSELVMIA 2494
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLT 244
+ + +PR ++LDP GT LF+TDWG + +I R M GS + I+ ++ P+GL
Sbjct: 2495 R--VERPRAIVLDPCNGT--LFFTDWGRFGTSGKIFRTTMAGSLKRAIVDKELSQPSGLA 2550
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D R KLYW D V KI +A++DG
Sbjct: 2551 IDYDDR------------------------------KLYWTD----AVREKIERADLDGR 2576
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLK 333
N +LV+ +Y A+ + +Y++ L+
Sbjct: 2577 NRELLVAATIY-PFAITVFRDYIYWTDLQ 2604
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 52/240 (21%)
Query: 78 GYCSQMC--TNTKGS-----YICSCNEGYVLEYDNHTCKAINH----------------- 113
G C+ MC T KG+ + C+C+ GY L+ D CK +
Sbjct: 644 GACNHMCIVTAVKGAPTGLGFRCACHTGYQLQTDLKNCKLVREFLMYSQQRFIKGKVLEP 703
Query: 114 ------SAAFLIISNRHSILVADLEEKG--------------KDHR---AQDIVVSGLDL 150
A ++S R + D + + + HR ++IV++ +
Sbjct: 704 VIEGFSDAILPVVSRRARFVGLDFDARDEFIYYSDVLQDVIYRVHRNGTGREIVLASQNE 763
Query: 151 -VEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
VEGLA DW ++Y++DSR + V N T+R L K N+ +PR +++ P+ G ++
Sbjct: 764 GVEGLAVDWASKNLYYIDSRKGTLNVLSTRNVTHRRTLLK-NLKRPRAIVVHPNRG--YI 820
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
F+++W I R DGS + + WPNGL++D RVY+ D+ LD + +L+
Sbjct: 821 FFSEWDRPANITRANTDGSGLLVFRNVTLGWPNGLSIDFKEDRVYWCDALLDHVQHANLD 880
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 14/153 (9%)
Query: 147 GLDLVEGLAYDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
G + + GL DW+ G++Y+ + N +EVC +G+NR VL K PR + ++P
Sbjct: 2137 GSNGIRGLTIDWVAGNMYFTNVYPHENYVEVCWLDGSNRKVLVKTTNDAPRELAVNPI-- 2194
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
R L+W D+G++P I R +DG+ ++++ I P LT+D+ T V++ DSKLD I
Sbjct: 2195 KRLLYWIDYGQHPGIGRALLDGTKWQPLVTSDISMPRDLTIDMQTHDVFWVDSKLDTIQK 2254
Query: 265 KSL----------EIKTNVNYSTIFRKLYWIDE 287
S ++ + + +YW+D
Sbjct: 2255 ISYNGANRKIIRRDLPNPMGIAIFLNDVYWVDR 2287
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 30/165 (18%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRW 337
+ RKLYW+D + + + +DG+ L SG + + A+ + G+ Y
Sbjct: 3289 VGRKLYWLDRHSKNLDV----SELDGTKRKTLRSG-VVDPRAIVVHPGIGY--------- 3334
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
L++T W I ++GMDGSN + I++ I WPN L++D T R+Y+AD+ LD+I +
Sbjct: 3335 LYFTSWHLQAYIAKMGMDGSNFTRILNWNDGIAWPNALSIDYFTDRIYWADAHLDYIAYT 3394
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGDNGVP-ALALDLENGMLYYS 439
+ +G R V + N VP AL L + +Y+S
Sbjct: 3395 DLEGRHRHIV-------------LSGNSVPHVFALSLFDDFIYWS 3426
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 135/347 (38%), Gaps = 83/347 (23%)
Query: 72 NECEQPGYCSQMC---TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILV 128
N C Q C +C + Y C C GY L + + I +L++ I+
Sbjct: 1695 NPCAQ-ARCQHLCLLSPSANEGYSCKCKPGYRLLSEG---RCIEEENPYLMVVKGTQIV- 1749
Query: 129 ADLEEKGKDHRAQDIV-VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC-----DENGTN 182
DL G D RA + V G++ GL +D G +YW+ R N E C G N
Sbjct: 1750 -DLPLNGGDARAGALAPVIGIESSTGLDFDRKGETLYWVQGRENDDENCTIYTTPYGGGN 1808
Query: 183 RIVLAKDNITQPRGMMLDPSPGTRWLFWTDW-GEN--------PRIERIGMDGSN--RST 231
+ + + G++ G + DW G N IE + +DG R+
Sbjct: 1809 KTLF----LGIETGIV-----GAPYTIAFDWLGRNLYIGNRVASNIEAVRVDGKQKYRTV 1859
Query: 232 IIS-----TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWID 286
I++ T + P L LD + KL+WID
Sbjct: 1860 ILANDGSETSVSKPKQLVLDPSEG------------------------------KLFWID 1889
Query: 287 EGGNGVPLKIGKANMDGSNASILVSGQLY-EALALDLENGMLYYSTLKCTRWLFWTDWGE 345
EG VP+KIG+ +M+G +A +L + E++ALD+E +YYST
Sbjct: 1890 EGVLEVPVKIGRVDMNGQDARVLRKDLKHPESIALDIEKQRIYYST------------SH 1937
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
+ I + +G + I++ K +L I R+Y+ D + I
Sbjct: 1938 SASICSMDYNGDEHTIILTEKQAIARPRSLGILDHRLYYLDPDFEKI 1984
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 15/123 (12%)
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGSN +LV + L + +K R L+W D+G++P I R +DG+
Sbjct: 2170 LDGSNRKVLVK-------TTNDAPRELAVNPIK--RLLYWIDYGQHPGIGRALLDGTKWQ 2220
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL-----MVEFT 415
++++ I P LT+D+ T V++ DSKLD I +Y+G R ++I DL + F
Sbjct: 2221 PLVTSDISMPRDLTIDMQTHDVFWVDSKLDTIQKISYNGANR-KIIRRDLPNPMGIAIFL 2279
Query: 416 NDL 418
ND+
Sbjct: 2280 NDV 2282
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 12/134 (8%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+ Y K+YW D N I N+ GS ++ + A+ LD NG L+++
Sbjct: 2461 IAYDWTQNKIYWTDSSNNS----IYAMNLVGSELVMIARVERPRAIVLDPCNGTLFFTD- 2515
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
W +G + +I R M GS + I+ ++ P+GL +D R++Y+ D+ + I
Sbjct: 2516 -------WGRFGTSGKIFRTTMAGSLKRAIVDKELSQPSGLAIDYDDRKLYWTDAVREKI 2568
Query: 393 DFCNYDGTGRQQVI 406
+ + DG R+ ++
Sbjct: 2569 ERADLDGRNRELLV 2582
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 133/339 (39%), Gaps = 78/339 (23%)
Query: 70 DMNECEQ--PGYCSQMCTN-----TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D N C Q G C Q+C + + +Y C C G L D+ C+ +N +L+ +
Sbjct: 2330 DNNPCAQLGNGGCDQLCFSFPPEPSSKNYRCECATGK-LGADSRKCETVNE---YLVFAT 2385
Query: 123 RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-NRIEVCDENGT 181
R I +L+ + ++ L V GL +D+ + + R +I N
Sbjct: 2386 RTEIRAVNLDPHSTE--VPFTPLTNLTNVVGLDFDFADNRMLYTQIRPWAKIAYTQANKP 2443
Query: 182 NR----IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ +VL+K P G+ D + ++WTD N I + + GS ++ ++
Sbjct: 2444 SHSDINVVLSKG--INPEGIAYDWTQNK--IYWTDSSNN-SIYAMNLVGS--ELVMIARV 2496
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P + LD ++F D W G G KI
Sbjct: 2497 ERPRAIVLDPCNGTLFFTD---------------------------W---GRFGTSGKIF 2526
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
+ M GS +V +L + LA+D ++ R L+WTD +IER +D
Sbjct: 2527 RTTMAGSLKRAIVDKELSQPSGLAIDYDD-----------RKLYWTD-AVREKIERADLD 2574
Query: 356 GSNRSTIISTKIYWPNGLTL--------DIATRRVYFAD 386
G NR +++ IY P +T+ D+ R VY A+
Sbjct: 2575 GRNRELLVAATIY-PFAITVFRDYIYWTDLQLRGVYRAE 2612
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 20/128 (15%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA--LALDLENGMLYYSTLKCTRWL 338
K+Y D G KI + G ++++ L LALD +G++
Sbjct: 460 KIYVADLVGQ----KIDVFELSGHWHAVVLGSNLTSPADLALDPTSGLM----------- 504
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
F D G+ + R MDG++ +I+S Y +G+T+DI ++RV++ DS LD+I+ +Y+
Sbjct: 505 FVADGGQ---VLRAHMDGTHARSIVSEAAYKASGVTVDIISKRVFWCDSLLDYIESVDYE 561
Query: 399 GTGRQQVI 406
G R V+
Sbjct: 562 GGQRVMVL 569
>gi|195132161|ref|XP_002010512.1| GI15973 [Drosophila mojavensis]
gi|193908962|gb|EDW07829.1| GI15973 [Drosophila mojavensis]
Length = 4555
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/377 (53%), Positives = 245/377 (64%), Gaps = 54/377 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V +RCVN+T VCD DCPNGADEG GCDLAEC+H+ G CS C TP GALC CPPG
Sbjct: 1243 VTERCVNITSVCDDTPDCPNGADEGEGCDLAECEHQSGQCSTLCQKTPNGALCVCPPGSE 1302
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
+ D TC D NEC+ PG CSQ CTNTKGSY CSC +GYVL + HTCKA+NH+AAFLII
Sbjct: 1303 IGPDGFTCVDTNECDPPGLCSQQCTNTKGSYFCSCTQGYVLGPNKHTCKAVNHTAAFLII 1362
Query: 121 SNRHSILVADLEEKGK-----------------------------------DH--RAQDI 143
SNRHSILVADL+E+G DH Q+I
Sbjct: 1363 SNRHSILVADLKEQGLERVPIIVENVVATASNMHTGTIFWSDMKLKKISRLDHGMEPQEI 1422
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ +GLDLVEGLAYDWI ++YWLDS+LN IEV ENG+NR+VL +++ITQPRGM +DPSP
Sbjct: 1423 ITTGLDLVEGLAYDWIAQNLYWLDSKLNTIEVSAENGSNRLVLVRESITQPRGMCIDPSP 1482
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
R++FWTDWGENPR+ERIGMDG+ R TII+TKIYWPNGLTLDIAT+RVYFADSKLDFID
Sbjct: 1483 DARFIFWTDWGENPRVERIGMDGTMRKTIINTKIYWPNGLTLDIATKRVYFADSKLDFID 1542
Query: 264 ------CKSLEIKTNVNY-------STIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
++ + +Y S LYW D N V + G N ++ V
Sbjct: 1543 FCYYNGTGRQQVLASSHYLLHPHSLSLFEDTLYWTDRQLNRV---LSANKFRGKNQTV-V 1598
Query: 311 SGQLYEALALDLENGML 327
S + + L++ + + L
Sbjct: 1599 SHLISQPLSIHVHHASL 1615
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 155/314 (49%), Gaps = 52/314 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C++ + VC+ DC + +DE C++ EC K + C + C T G C C G L
Sbjct: 3011 QCIDYSLVCNKVPDCTDESDEPAHCNVDECAKVEINQCGHKCVDTLTGYYCDCNEGYKLL 3070
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYV-LEYDNHTCKAINHSAAFLII 120
D C D++EC E PG CSQ C+NT GS+ C C+E Y + D HTCK ++ +LI
Sbjct: 3071 ADGKACADVDECLELPGACSQHCSNTPGSFYCKCDENYYERQNDEHTCKRKDNIPPWLIF 3130
Query: 121 SNRHSILVADLEEKGKDHRAQDIV-VSGLDL----------------------------- 150
+N++ + ++ + QD++ V LD
Sbjct: 3131 TNKYYVRNMSVDGHQYNLMHQDLMNVVALDFDIKDEYMYFCDVTAKTIFRAKYSGRSDEQ 3190
Query: 151 --------------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+EG+A DW+G +YWLD ++V + +GT R L + + PR
Sbjct: 3191 PTEREAVIRHDSHGLEGIAIDWVGRKLYWLDRHSKNLDVSELDGTKRKTL-RSGVVDPRA 3249
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYF 254
+++ PGT +L++T W I ++GMDGSN + I+ + I WPN L++D T R+Y+
Sbjct: 3250 IVV--HPGTGYLYFTSWHLQAYIAKMGMDGSNFTRILNWNDGIAWPNALSIDYFTDRIYW 3307
Query: 255 ADSKLDFIDCKSLE 268
AD+ LD+I LE
Sbjct: 3308 ADAHLDYIAYTDLE 3321
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 131/517 (25%), Positives = 219/517 (42%), Gaps = 90/517 (17%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
A +C+ +++CDGK DC +G+DE C + C C C P+ G +C C G+ L
Sbjct: 190 APKCILKSQLCDGKRDCEDGSDEETACSIDSCPALS--CEFKCGPSLTGGVCYCRQGQSL 247
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+ D+ TC D++EC + G+C Q+CTNT GSY C C +GY+L ++ C A + + LI +
Sbjct: 248 APDNRTCIDLDECAEWGHCDQLCTNTPGSYTCQCAQGYML-INSSKCIAPDANNLQLIFA 306
Query: 122 NRHSIL---VADLEEKG------------------------KDHRAQDIVVSGLDLV--- 151
+ +I+ D E K K + Q + + L+
Sbjct: 307 HDRAIMRMNAHDSEPKVVANATAAAGVAFHYARNTLYWSDIKTRKVQSLPLDALNSAVAP 366
Query: 152 -----------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
LA DW+G IY D +I+V + +G V+ N+T P + LD
Sbjct: 367 LDQTLPGTWAPVALAVDWVGDKIYVADLVGQKIDVFELSGHWHAVVLGSNLTSPADLALD 426
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +F D G+ + R MDG++ +I+S Y +G+T+DI +RV++ DS LD
Sbjct: 427 PTAGL--MFVADGGQ---VLRAHMDGTHARSIVSEAAYKASGVTVDIIGKRVFWCDSLLD 481
Query: 261 FIDCKSLE------------IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
+I+ E + + + ++YW D G+ + + K +G +SI
Sbjct: 482 YIESVDYEGAQRVMVLRGQNVPSPSRLALFENRIYWTDATKKGI-MSVDK--FEGP-SSI 537
Query: 309 LVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY 368
V+ Y+A + G++ L NP G G N I++
Sbjct: 538 QVT---YKAKDIHEPKGIIAVHALS-------QPHVSNPCGNNNG--GCNHMCIVTAVKG 585
Query: 369 WPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALA 428
P GL A Y + L QQ + ++E + D +P ++
Sbjct: 586 APTGLGFRCACHTGYQLQTDLKNCKLVREFLMYSQQRFIKGKVLEPVIEGFSDAILPVVS 645
Query: 429 ---------LDLENGMLYYSTEGAEFLKTPLFCITRN 456
D + +YYS + L+ ++ + RN
Sbjct: 646 RRARFVGLDFDARDEFIYYS----DVLQDVIYRVHRN 678
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 169/429 (39%), Gaps = 104/429 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHK-FGLCSNTCHP-TPLGALCTCPPGEIL 61
C+ +VCD DC + +DE + C + G C + CH T G +CTC PG I+
Sbjct: 3883 HCIERAQVCDYSDDCGDASDELGCHHTSSCSEQNRGGCQHHCHNLTDDGYICTCYPGYII 3942
Query: 62 SNDSVT-CQDMNECEQPGY-CSQMCTNTKGSYICSCNEGYVL-EYDNHTCKA-------- 110
+ D+ C D++EC + CS C N G+Y CSC EG+ L + + CKA
Sbjct: 3943 APDNKKKCADVDECATRQHTCSHQCHNMNGTYSCSCREGFHLSDSASGVCKAEKEDVVLV 4002
Query: 111 -----------INHSAAFLIISN--------------------------RHSILVADLEE 133
+ F +I++ + S +V L+
Sbjct: 4003 FANGPEIRGLDLQKKEEFDVIASEKRIEALDYDAQQQIVFWADSYDKTIKRSYMVNALDG 4062
Query: 134 KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD------SRLNRIEVCDENGTNRIVLA 187
+ K AQD+ + G +A DW+ ++YW + R+ V +G R +
Sbjct: 4063 QAKIGFAQDLNMKGGSKPTAVAVDWLASNLYWAEVDRTGSKPRGRVMVAKTDGRYRRSIV 4122
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P + ++P G ++W D G P+IE MDGS R +I+ +I P GLT+D
Sbjct: 4123 NAGLEVPTSIAVNPQLGR--IYWADAGSAPKIEVSWMDGSKRRPLITEQIRHPAGLTIDY 4180
Query: 248 ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307
+ + +YW+D N I DGS
Sbjct: 4181 SQDHI-----------------------------IYWVDTKLN----TIESMRADGSRRK 4207
Query: 308 ILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 366
+V G QL +ALDL +++ T D GE R ++ G ++
Sbjct: 4208 SIVKGDQLRHPVALDLFESSMFWVT---------RDTGELLRQDKFGR---GVQVVVHRN 4255
Query: 367 IYWPNGLTL 375
+ P+GL +
Sbjct: 4256 LVNPSGLKV 4264
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 147 GLDLVEGLAYDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
G + + GL DW+ G++Y+ + N +EVC +GTNR VL K PR + ++P
Sbjct: 2061 GSNGIHGLTIDWVAGNMYFANVYPHENYVEVCWLDGTNRKVLVKKTNDAPRELAVNPI-- 2118
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
R L+W D G++PRI + +DGS+ ++++ I P LT+D+ T VY+ DSKLD I
Sbjct: 2119 KRLLYWIDHGQHPRIGKALLDGSDWIPLVTSGISQPRDLTIDMQTHDVYWVDSKLDTIQK 2178
Query: 265 KSL----------EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
S ++ V + +YW+D N V + + G+N+ +
Sbjct: 2179 ISYNGVNAKVIRRDLPNPVGIAIYLNDVYWVDGNLNSV---FKASKLYGNNSEV 2229
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 42/199 (21%)
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
H ++V+S EG+AYDW IYW DS N I + GT +++A+ + +PR +
Sbjct: 2369 HSDINVVLSKGINPEGIAYDWTQNKIYWTDSSNNSIYAMNLLGTEPVMIAR--VERPRAI 2426
Query: 198 MLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
+LDP GT LF+TDWG + +I R M GS + I+ ++ P+GL +D R
Sbjct: 2427 VLDPCNGT--LFFTDWGRYSTSGKIFRTTMAGSLKRAIVDKELSQPSGLAIDYDDR---- 2480
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
KLYW D V KI +A++DG N +LV+ +
Sbjct: 2481 --------------------------KLYWTD----AVREKIERADLDGRNRELLVAATI 2510
Query: 315 YEALALDLENGMLYYSTLK 333
Y A+ + +Y++ L+
Sbjct: 2511 Y-PFAITVFRDYIYWTDLQ 2528
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 52/240 (21%)
Query: 78 GYCSQMC--TNTKGS-----YICSCNEGYVLEYDNHTCKAINH----------------- 113
G C+ MC T KG+ + C+C+ GY L+ D CK +
Sbjct: 572 GGCNHMCIVTAVKGAPTGLGFRCACHTGYQLQTDLKNCKLVREFLMYSQQRFIKGKVLEP 631
Query: 114 ------SAAFLIISNRHSILVADLEEKG--------------KDHR---AQDIVVSGLDL 150
A ++S R + D + + + HR ++IV++ +
Sbjct: 632 VIEGFSDAILPVVSRRARFVGLDFDARDEFIYYSDVLQDVIYRVHRNGTGREIVLASQNE 691
Query: 151 -VEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
VEGLA DW ++Y++DSR + V N T+R L K N+ +PR +++ P+ G ++
Sbjct: 692 GVEGLAVDWASKNLYYIDSRKGTLNVLSTRNVTHRRTLLK-NLKRPRAIVVHPNRG--YI 748
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
F+++W I R DGS + + WPNGL++D RVY+ D+ LD + +L+
Sbjct: 749 FFSEWDRPANITRANTDGSGLLVFRNVTLGWPNGLSIDFKEDRVYWCDALLDHVQHANLD 808
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 106/462 (22%), Positives = 176/462 (38%), Gaps = 107/462 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGC---DLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
+C+ CDG+ DC + +DE GC ++ + +F + C L +C P
Sbjct: 2970 KCIRNQYRCDGEDDCGDHSDE-VGCKKENVTCAQGQFACTNGQCIDYSL--VCNKVPDCT 3026
Query: 61 LSNDSVTCQDMNECEQP--GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL 118
+D +++EC + C C +T Y C CNEGY L D C ++
Sbjct: 3027 DESDEPAHCNVDECAKVEINQCGHKCVDTLTGYYCDCNEGYKLLADGKACADVDECLELP 3086
Query: 119 IISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDE 178
++H G Y CDE
Sbjct: 3087 GACSQHCSNTP-------------------------------GSFYCK---------CDE 3106
Query: 179 NGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY 238
N R D T R + P WL +T+ + + +DG ++ ++ +
Sbjct: 3107 NYYER---QNDEHTCKRKDNIPP-----WLIFTN---KYYVRNMSVDG-HQYNLMHQDLM 3154
Query: 239 WPNGLTLDIATRRVYFADSKLDFI---------DCKSLEIKTNVNYST----------IF 279
L DI +YF D I D + E + + + + +
Sbjct: 3155 NVVALDFDIKDEYMYFCDVTAKTIFRAKYSGRSDEQPTEREAVIRHDSHGLEGIAIDWVG 3214
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLF 339
RKLYW+D + + + +DG+ L SG + + A+ + G T +L+
Sbjct: 3215 RKLYWLDRHSKNLDV----SELDGTKRKTLRSG-VVDPRAIVVHPG---------TGYLY 3260
Query: 340 WTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
+T W I ++GMDGSN + I++ I WPN L++D T R+Y+AD+ LD+I + +
Sbjct: 3261 FTSWHLQAYIAKMGMDGSNFTRILNWNDGIAWPNALSIDYFTDRIYWADAHLDYIAYTDL 3320
Query: 398 DGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYS 439
+G R V L G + AL L + +Y+S
Sbjct: 3321 EGRHRHIV------------LSGSSVPHVFALSLFDDYIYWS 3350
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 127/337 (37%), Gaps = 65/337 (19%)
Query: 72 NECEQPGYCSQMC---TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILV 128
N C Q C +C +T+ Y C C G+ L + + I +L++ I+
Sbjct: 1621 NPCAQ-ARCQHLCLLSPSTQEGYSCKCKPGFRLHSEG---RCIEEENPYLMVVKGTQIV- 1675
Query: 129 ADLEEKGKDHRAQDIV-VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD------ENGT 181
DL G D RA + V G++ GL +D G +YW+ R + E C G
Sbjct: 1676 -DLPLNGGDARAGALAPVIGIESSTGLDFDRKGETLYWVQGREDDDENCTIYTTPYGGGN 1734
Query: 182 NRIVLAKDN--ITQPRGMMLDPSPGTRWLFWTDWGEN---PRIERIGMDGSNRSTIISTK 236
+ L +N + P + D WL + N IE + +DG + T
Sbjct: 1735 KTLFLGVENGIVGAPYTIAFD------WLGRNLYIGNRVASNIEAVRVDGKQK---YRTV 1785
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI 296
I NG ++ + D KL+WIDEG + +KI
Sbjct: 1786 ILANNGSENSVSKPKQLVLDPSEG--------------------KLFWIDEGV--LEIKI 1823
Query: 297 GKANMDGSNASILVSGQLY-EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
+ +M+G +A +L + E++ LD + M+YYST I + +
Sbjct: 1824 ARVDMNGQDARVLRKDLKHPESITLDTDKKMIYYST------------SSTASICAMDYN 1871
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
G I+ K +L + R+Y+ D + I
Sbjct: 1872 GDQHRVILDEKHAISRVRSLGVLDHRLYYLDPTYEKI 1908
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
R L+W D G++PRI + +DGS+ ++++ I P LT+D+ T VY+ DSKLD I
Sbjct: 2120 RLLYWIDHGQHPRIGKALLDGSDWIPLVTSGISQPRDLTIDMQTHDVYWVDSKLDTIQKI 2179
Query: 396 NYDGTGRQQVILIDL 410
+Y+G +VI DL
Sbjct: 2180 SYNGVN-AKVIRRDL 2193
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 18/137 (13%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+ Y K+YW D N I N+ G+ ++ + A+ LD NG L
Sbjct: 2385 IAYDWTQNKIYWTDSSNNS----IYAMNLLGTEPVMIARVERPRAIVLDPCNGTL----- 2435
Query: 333 KCTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
F+TDWG + +I R M GS + I+ ++ P+GL +D R++Y+ D+
Sbjct: 2436 ------FFTDWGRYSTSGKIFRTTMAGSLKRAIVDKELSQPSGLAIDYDDRKLYWTDAVR 2489
Query: 390 DFIDFCNYDGTGRQQVI 406
+ I+ + DG R+ ++
Sbjct: 2490 EKIERADLDGRNRELLV 2506
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 132/339 (38%), Gaps = 78/339 (23%)
Query: 70 DMNECEQPGY--CSQMCTN-----TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D N C + G C Q+C + + +Y C C G L D C+ +N +L+ +
Sbjct: 2254 DNNPCAKLGNGGCHQLCFSFPQEPSNRNYRCDCATGK-LSADGRKCETVNE---YLVFAT 2309
Query: 123 RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-NRIEVCDENGT 181
R I +L+ + ++ L V GL +D+ H+ + R +I N
Sbjct: 2310 RTEIRAVNLDPHSTE--VPFTPLTNLTNVVGLDFDFADNHMLFTQIRPWAKIAYTSANKP 2367
Query: 182 NR----IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ +VL+K P G+ D + ++WTD N I + + G+ ++ ++
Sbjct: 2368 SHSDINVVLSKG--INPEGIAYDWTQNK--IYWTDSSNN-SIYAMNLLGT--EPVMIARV 2420
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P + LD ++F D W G KI
Sbjct: 2421 ERPRAIVLDPCNGTLFFTD---------------------------W---GRYSTSGKIF 2450
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
+ M GS +V +L + LA+D ++ R L+WTD +IER +D
Sbjct: 2451 RTTMAGSLKRAIVDKELSQPSGLAIDYDD-----------RKLYWTD-AVREKIERADLD 2498
Query: 356 GSNRSTIISTKIYWPNGLTL--------DIATRRVYFAD 386
G NR +++ IY P +T+ D+ R VY A+
Sbjct: 2499 GRNRELLVAATIY-PFAITVFRDYIYWTDLQLRGVYRAE 2536
>gi|328778687|ref|XP_624737.2| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Apis mellifera]
Length = 4546
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/377 (52%), Positives = 246/377 (65%), Gaps = 54/377 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V + CVN+T VCD K DCPNGADEGP C+ EC+++ G CSN C TPLG CTCP GE
Sbjct: 1332 VTNICVNITSVCDNKFDCPNGADEGPACNFQECEYRGGYCSNDCIETPLGKQCTCPSGEE 1391
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
L+ D TC+D+NECE PG CSQ+C N K Y C+C EGY LE D HTCKA NHS AFLII
Sbjct: 1392 LNKDGYTCEDLNECEPPGRCSQICVNIKRGYYCNCVEGYTLEKDKHTCKAFNHSVAFLII 1451
Query: 121 SNRHSILVADLEEKG-------------------------------------KDHRAQDI 143
SNRH+ILVADL+++ + +D+
Sbjct: 1452 SNRHTILVADLQDQALERVPINVENVVATASNMHTGTIFWSDMKLKKISRLDRGSDPEDV 1511
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ +GLDLVEGLAYDWIG ++YWLDS+LN IEV E G+NR++L K+NITQPRGM LDPSP
Sbjct: 1512 ISTGLDLVEGLAYDWIGHNLYWLDSKLNTIEVAKETGSNRMILVKENITQPRGMCLDPSP 1571
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G RWLFWTDWGENPRIERIGMDG+NRSTII+TKIYWPNGL LDIA +R+YFADSKLDFID
Sbjct: 1572 GARWLFWTDWGENPRIERIGMDGTNRSTIINTKIYWPNGLALDIANKRIYFADSKLDFID 1631
Query: 264 ------CKSLEIKTNVNY------STIFR-KLYWIDEGGNGVPLKIGKANMDGSNASILV 310
K +++ + +Y T+F +YW D N V + G N ++ V
Sbjct: 1632 TCLYDGSKRIQVLASSHYLLHPHSLTLFEDTMYWTDRQLNRV---LSAHKFYGVNQTV-V 1687
Query: 311 SGQLYEALALDLENGML 327
S + + L++ + + +L
Sbjct: 1688 SHLISQPLSIHVHHPVL 1704
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 151/307 (49%), Gaps = 46/307 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++ VC+ + DC + +DE C++ EC + C++ C TP C C PG L
Sbjct: 3041 CIDQQLVCNKEPDCADESDEPAHCNVDECAMVEMNQCAHKCIDTPTSYYCECNPGYRLLA 3100
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEG-YVLEYDNHTCKAINHSAAFLIIS 121
D C+D++EC E P CSQ C NT GS+ C CN Y D HTCK ++ ++I +
Sbjct: 3101 DGKACEDIDECVETPQVCSQQCQNTPGSFYCKCNHYWYERAADEHTCKRRDNIIPWIIFT 3160
Query: 122 NRHSILVADLEEKGKDHRAQDIV-VSGLDL------------------------------ 150
N++ + ++ QD++ V LD
Sbjct: 3161 NKYYVRNMSIDALNYSLMHQDLINVVALDADYGDQMLYFCDVTAKTIFRAPIAGGEKEAI 3220
Query: 151 -------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+EG+A DWIG +YWLD ++V + NGTNR L I PR +++ P
Sbjct: 3221 IRHDSLGLEGIAVDWIGRKLYWLDRHAKHLDVAELNGTNRKTLLT-GIADPRAIVV--HP 3277
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDF 261
GT +L++T W I ++GMDGSN + I++ I WPN LT+D T R+++AD+ LD+
Sbjct: 3278 GTGYLYFTSWHLQAYIGKMGMDGSNFTRILTWEDDIAWPNALTIDYFTDRIFWADAHLDY 3337
Query: 262 IDCKSLE 268
I LE
Sbjct: 3338 IAFADLE 3344
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 145/301 (48%), Gaps = 50/301 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C++ +++CDGKTDC + ADE C C C C +P G +C CP G IL+ND
Sbjct: 284 CIDRSQICDGKTDCEDKADEEATCSSVICTSL--ACRYKCRASPTGGVCYCPAGWILAND 341
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC D +EC + G+C Q+C NT+GSY CSC G++L+ N C+A H L +
Sbjct: 342 STTCIDRDECSEWGFCEQLCKNTEGSYTCSCAPGFILQGLNK-CRAQQHPGVKLELLVAQ 400
Query: 125 SILVADLEEKGKDHR--AQDIVVSGLDLV-----------------------EG------ 153
V + G+D A SG+D + EG
Sbjct: 401 EKAVWRMSSNGEDRTIVANTTSASGVDYLYSRDLLFWSDVKTKKVHSEPLNGEGSSSRVA 460
Query: 154 -----------LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+A DWIG +Y +DS + +I+V + +G + N+T P + LDP+
Sbjct: 461 IYLTSSWGPVSIAVDWIGEKLYVVDSVVQKIDVLELDGRYHGIALSSNLTNPTDIGLDPT 520
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G ++ ++ R+ R MDG+ I+ Y +G+ +D+ RR+++ DS+LD+I
Sbjct: 521 VGLMFI-----ADSKRVLRANMDGTVDFPIVFEAAYKVSGIAVDVIARRIFWCDSQLDYI 575
Query: 263 D 263
+
Sbjct: 576 E 576
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 165/376 (43%), Gaps = 85/376 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE--CKHKFGLCSNTCHP-TPLGALCTCPPGEI 60
+C+ TK+CD DC + +DE GC + G CS+ CH T G +C C PG I
Sbjct: 3904 KCIERTKLCDFADDCGDSSDE-LGCHHNKPCLDSNKGGCSHYCHNITEGGYICACYPGYI 3962
Query: 61 LS-NDSVTCQDMNECEQPGY-CSQMCTNTKGSYICSCNEGYVLEYDNHT--CKAINHSAA 116
+S N+ C+D+NEC + CSQ+CTN G+Y CSC +G+ L DN + C+A++ +
Sbjct: 3963 ISQNNRKHCEDINECVTGQHQCSQLCTNLNGTYSCSCRQGFELS-DNRSGVCRAVDTNMM 4021
Query: 117 FL-------------------IISNRHSILVADLEEK---------------------GK 136
L +I+N + D + + K
Sbjct: 4022 ILFANGPGIRAYDPYDKQEIEVIANEKRVQALDFDPRSEYVFWIDGYDNSIKRSYMVNAK 4081
Query: 137 DHR-----AQDIVVSGLDLVEGLAYDWIGGHIYWLD------SRLNRIEVCDENGTNRIV 185
D + AQD+ + + LA DWI G++YW + + R+ V +G R
Sbjct: 4082 DGQVKIGYAQDLNIKSESGLTSLAMDWISGNLYWTEFDSSGTTLFGRVMVSKADGRYRRS 4141
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
L + P +++DP G W D G P+IE MDG R ++S +I P LT+
Sbjct: 4142 LITVGLEIPTSIVVDPELGK--AIWADAGSQPKIEIAWMDGDRRKQLVSDRIGQPIALTI 4199
Query: 246 DIATRRV-YFADSKLDFIDC------------KSLEIKTNVNYSTIFRKLYWI------- 285
D + + V Y+ADSKL+ I+ K +K ++ LYWI
Sbjct: 4200 DYSMQHVLYWADSKLNTIESIEQDGSNRKIILKGDSLKHPISLDVFENSLYWITKRTGEL 4259
Query: 286 ---DEGGNGVPLKIGK 298
D+ G GVP I K
Sbjct: 4260 IRQDKFGRGVPEIIVK 4275
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 96/191 (50%), Gaps = 25/191 (13%)
Query: 141 QDIVVSGL--DLVEGLAYDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRG 196
Q +V G+ + + GLA DW+ ++Y+ + N +EVC +G+NR VL K PR
Sbjct: 2143 QHVVKQGIGSNGIRGLAIDWVAENMYFTNVFPHDNYVEVCKLDGSNRKVLVKKTTDSPRE 2202
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ ++P ++L+W D+G+ PR+ + +DGSN I+++ I P +T+D T VY+ D
Sbjct: 2203 LAVNPI--KKYLYWIDYGQYPRLGKAYLDGSNWMPIVTSGISTPRDITIDPITHDVYWVD 2260
Query: 257 SKLDFIDCKSLEIKTNVNYSTIFRKL-------------YWIDEGGNGVPLKIGKANMDG 303
SK D I S T N I R L YW+D G+ K K N
Sbjct: 2261 SKQDTIQKVSY---TGGNRQIIRRNLPNPMGVAIYGNDVYWVDRNL-GIVFKASKQN--D 2314
Query: 304 SNASILVSGQL 314
+N+S+ V L
Sbjct: 2315 NNSSVTVRSNL 2325
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 89/185 (48%), Gaps = 42/185 (22%)
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EG++YDW +YW DS N I D NG+N +++A+ + +PR +++DP G+ L++T
Sbjct: 2471 EGISYDWTQKKVYWTDSSNNSIYAMDLNGSNLVMIAR--VDRPRAIVVDPCNGS--LYFT 2526
Query: 212 DWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
DWG + +I + M GS + +I + P+GL +D
Sbjct: 2527 DWGRFGTSGKIFKTTMAGSLKKAVIDKDLSQPSGLAIDYED------------------- 2567
Query: 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLY 328
R LYW D V KI ++ +DGSN ILVS +Y A+ + +Y
Sbjct: 2568 -----------RMLYWTD----AVREKIERSELDGSNRQILVSATIY-PFAITVFREHIY 2611
Query: 329 YSTLK 333
++ L+
Sbjct: 2612 WTDLQ 2616
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 72/126 (57%), Gaps = 4/126 (3%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDP 201
++ S + VEGLA DW+ ++Y++DSR + V N T R L K N+ +PR +++ P
Sbjct: 774 VLASQNEGVEGLAVDWVAKNLYYIDSRKGTLNVLSTRNVTYRRTLLK-NLKRPRAIVIHP 832
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
+ G ++F+++W I R DGSN + + WPNGL +D A R+Y+ D+ LD
Sbjct: 833 NQG--YIFFSEWDRPANISRAYTDGSNLIVFKNLSLGWPNGLAIDFAKDRLYWCDALLDH 890
Query: 262 IDCKSL 267
+ +L
Sbjct: 891 VQHSNL 896
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 175/427 (40%), Gaps = 94/427 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT---CPPGEI 60
+C+ CDG+ DC + +DE GC K K CSN P +C C ++
Sbjct: 2996 KCIRKQFHCDGQDDCGDHSDED-GCPP---KMKNMTCSN-----PKEFMCANGICIDQQL 3046
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
+ N C D E ++P +C+ +E ++E + K I+ ++
Sbjct: 3047 VCNKEPDCAD--ESDEPAHCN-------------VDECAMVEMNQCAHKCIDTPTSYYCE 3091
Query: 121 SNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGG-----HIYWLDSRLNRIEV 175
N L+AD GK D V + + G + YW +
Sbjct: 3092 CNPGYRLLAD----GKACEDIDECVETPQVCSQQCQNTPGSFYCKCNHYWYE------RA 3141
Query: 176 CDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST 235
DE+ R +DNI W+ +T+ + + +D N S ++
Sbjct: 3142 ADEHTCKR----RDNIIP-------------WIIFTN---KYYVRNMSIDALNYS-LMHQ 3180
Query: 236 KIYWPNGLTLDIATRRVYFAD--------------SKLDFIDCKSLEIKTNVNYSTIFRK 281
+ L D + +YF D K I SL ++ + I RK
Sbjct: 3181 DLINVVALDADYGDQMLYFCDVTAKTIFRAPIAGGEKEAIIRHDSLGLE-GIAVDWIGRK 3239
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
LYW+D + + A ++G+N L++G + + A+ + G T +L++T
Sbjct: 3240 LYWLDRHAKHLDV----AELNGTNRKTLLTG-IADPRAIVVHPG---------TGYLYFT 3285
Query: 342 DWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
W I ++GMDGSN + I++ I WPN LT+D T R+++AD+ LD+I F + +G
Sbjct: 3286 SWHLQAYIGKMGMDGSNFTRILTWEDDIAWPNALTIDYFTDRIFWADAHLDYIAFADLEG 3345
Query: 400 TGRQQVI 406
R++V+
Sbjct: 3346 HNRRKVL 3352
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 130/348 (37%), Gaps = 71/348 (20%)
Query: 80 CSQMC----TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
C +C T +G Y C C G+ L + + +L++ I+ L +
Sbjct: 1717 CDHLCLLSPTKPQG-YTCKCQVGFRL----FNGQCLEEEIPYLMVLRGSQIVDVSLLPRS 1771
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT---------NRIVL 186
VV G++ + + YD IYWL ++ + DENGT NR
Sbjct: 1772 IKTGYITPVV-GVESGKFIDYDRKEKMIYWLQTKDDD----DENGTIYTTPYNGGNRTEF 1826
Query: 187 AKDNITQPRGMMLDPSP------GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 240
N + G++ PS G + N IE I +DG + I +
Sbjct: 1827 P--NASGESGIVGAPSAMAFDWLGRNLFIGNKYASN--IEAIKIDGKTKYRTI---VLAN 1879
Query: 241 NGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+G +A + D + ++W+D G G+P KIG+ N
Sbjct: 1880 DGNKTSVAKPKAMCVDP--------------------LEGHIFWVDGGSFGIPTKIGRVN 1919
Query: 301 MDGSNASILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNR 359
MDG+N ILV + EA+ +D+ +Y+S+L I + DG N
Sbjct: 1920 MDGTNPIILVDNVERPEAITIDIPTKTIYFSSLY------------PALIMALSTDGQNL 1967
Query: 360 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
TI+S I P L + R+Y D D I+ + G I+
Sbjct: 1968 RTIVSQNIALPKALA--VHDSRLYLLDPLYDKIERVDLPDGGNPTTII 2013
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGSN +LV L + ++L+W D+G+ PR+ + +DGSN
Sbjct: 2184 LDGSNRKVLVKKTTDSPRELAVN---------PIKKYLYWIDYGQYPRLGKAYLDGSNWM 2234
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
I+++ I P +T+D T VY+ DSK D I +Y G RQ +
Sbjct: 2235 PIVTSGISTPRDITIDPITHDVYWVDSKQDTIQKVSYTGGNRQII 2279
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
++Y +K+YW D N I +++GSN ++ A+ +D NG LY++
Sbjct: 2473 ISYDWTQKKVYWTDSSNNS----IYAMDLNGSNLVMIARVDRPRAIVVDPCNGSLYFTD- 2527
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
W +G + +I + M GS + +I + P+GL +D R +Y+ D+ + I
Sbjct: 2528 -------WGRFGTSGKIFKTTMAGSLKKAVIDKDLSQPSGLAIDYEDRMLYWTDAVREKI 2580
Query: 393 DFCNYDGTGRQQVI 406
+ DG+ RQ ++
Sbjct: 2581 ERSELDGSNRQILV 2594
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 120/335 (35%), Gaps = 98/335 (29%)
Query: 78 GYCSQMCTNTKGS-------YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
G C MC T S Y C+C+ G+ L D C + FL+ S + I
Sbjct: 661 GGCQHMCIVTAASDQENRLGYRCACDIGWRLSSDQRNCNLVQE---FLMYSQQRFI---- 713
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
KG R D V+ G I + SR R
Sbjct: 714 ---KG---RVLDPVMEGF-----------SDAISPVVSRRARF----------------- 739
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ LD ++++++D ++ I R+ G+ R +++++ GL +D +
Sbjct: 740 ------VGLDYDAYDQYIYYSDVLQD-VIYRVRQSGAGREVVLASQNEGVEGLAVDWVAK 792
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
+Y+ DS+ ++ S NV Y K N+ A ++
Sbjct: 793 NLYYIDSRKGTLNVLSTR---NVTYRRTLLK------------------NLKRPRAIVIH 831
Query: 311 SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 370
Q Y +F+++W I R DGSN + + WP
Sbjct: 832 PNQGY----------------------IFFSEWDRPANISRAYTDGSNLIVFKNLSLGWP 869
Query: 371 NGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
NGL +D A R+Y+ D+ LD + N +GT + V
Sbjct: 870 NGLAIDFAKDRLYWCDALLDHVQHSNLNGTDVRSV 904
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 81/189 (42%), Gaps = 36/189 (19%)
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
ENP I T+IS I P G++ D ++VY+ DS + I L V
Sbjct: 2452 AENPSSSEI-------HTLISKGIN-PEGISYDWTQKKVYWTDSSNNSIYAMDLNGSNLV 2503
Query: 274 NYSTIFR-----------KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALAL 320
+ + R LY+ D G G KI K M GS ++ L + LA+
Sbjct: 2504 MIARVDRPRAIVVDPCNGSLYFTDWGRFGTSGKIFKTTMAGSLKKAVIDKDLSQPSGLAI 2563
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
D E+ MLY WTD +IER +DGSNR ++S IY P +T +
Sbjct: 2564 DYEDRMLY-----------WTD-AVREKIERSELDGSNRQILVSATIY-PFAIT--VFRE 2608
Query: 381 RVYFADSKL 389
+Y+ D +L
Sbjct: 2609 HIYWTDLQL 2617
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 30/220 (13%)
Query: 118 LIISNRHSILVADLEEKGKDHR-----AQDIVVSGLDLVEGLAYDWIGGHIYWLD----- 167
L I N+++ + ++ GK A D + + + + D + GHI+W+D
Sbjct: 1851 LFIGNKYASNIEAIKIDGKTKYRTIVLANDGNKTSVAKPKAMCVDPLEGHIFWVDGGSFG 1910
Query: 168 --SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD 225
+++ R+ + +GTN I+L DN+ +P + +D T+ ++++ I + D
Sbjct: 1911 IPTKIGRVNM---DGTNPIILV-DNVERPEAITIDIP--TKTIYFSSLYP-ALIMALSTD 1963
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
G N TI+S I P L + R+Y D D I+ +++ N +TI I
Sbjct: 1964 GQNLRTIVSQNIALPKALA--VHDSRLYLLDPLYDKIE--RVDLPDGGNPTTI------I 2013
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
D L I K + G + + +G E + L G
Sbjct: 2014 DNDSELKTLTIYKKRITGDHPCFINNGDC-EQICLPASGG 2052
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 106/301 (35%), Gaps = 54/301 (17%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
IV V G+A D I I+W DS+L+ IE D G NR+++ + T PS
Sbjct: 545 IVFEAAYKVSGIAVDVIARRIFWCDSQLDYIETADYLGRNRVMVLRGTHT--------PS 596
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
P R T+ +IYW +G I + D + I
Sbjct: 597 P------------------------TRLTLFENRIYWTDGTKQAIMSVDKTEGDYSIRTI 632
Query: 263 ----DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA-SILVSGQLYEA 317
D K+++ + + + G + I A D N + +
Sbjct: 633 YKMRDAKAIKTLHPLTQPMVSNPCG--NNNGGCQHMCIVTAASDQENRLGYRCACDIGWR 690
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
L+ D N L L ++ F +P +E S ++S + + GL D
Sbjct: 691 LSSDQRNCNLVQEFLMYSQQRFIKGRVLDPVMEGF---SDAISPVVSRRARFV-GLDYDA 746
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLY 437
+ +Y++D D I G GR+ V+ + GV LA+D LY
Sbjct: 747 YDQYIYYSDVLQDVIYRVRQSGAGREVVL-----------ASQNEGVEGLAVDWVAKNLY 795
Query: 438 Y 438
Y
Sbjct: 796 Y 796
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 61/142 (42%), Gaps = 26/142 (18%)
Query: 317 ALALDLENGMLYYSTLKCTRW----LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
+ LDL G+ Y W L+W D N IE GSNR ++ I P G
Sbjct: 1513 STGLDLVEGLAY-------DWIGHNLYWLDSKLN-TIEVAKETGSNRMILVKENITQPRG 1564
Query: 373 LTLDIA--TRRVYFAD-SKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALAL 429
+ LD + R +++ D + I+ DGT R +I + NG LAL
Sbjct: 1565 MCLDPSPGARWLFWTDWGENPRIERIGMDGTNRSTII--------NTKIYWPNG---LAL 1613
Query: 430 DLENGMLYYSTEGAEFLKTPLF 451
D+ N +Y++ +F+ T L+
Sbjct: 1614 DIANKRIYFADSKLDFIDTCLY 1635
>gi|380017337|ref|XP_003692614.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 2-like [Apis florea]
Length = 4608
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/377 (52%), Positives = 246/377 (65%), Gaps = 54/377 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V + CVN+T VCD K DCPNGADEGP C+ EC+++ G CSN C TPLG CTCP GE
Sbjct: 1333 VTNICVNITSVCDNKFDCPNGADEGPACNFQECEYRGGYCSNDCIETPLGKQCTCPSGEE 1392
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
L+ D TC+D+NECE PG CSQ+C N K Y C+C EGY LE D HTCKA NHS AFLII
Sbjct: 1393 LNKDGYTCEDLNECEPPGRCSQICVNIKRGYYCNCVEGYTLEKDKHTCKAFNHSVAFLII 1452
Query: 121 SNRHSILVADLEEKG-------------------------------------KDHRAQDI 143
SNRH+ILVADL+++ + +D+
Sbjct: 1453 SNRHTILVADLQDQALERVPINVENVVATASNMHTGTIFWSDMKLKKISRLDRGSDPEDV 1512
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ +GLDLVEGLAYDWIG ++YWLDS+LN IEV E G+NR++L K+NITQPRGM LDPSP
Sbjct: 1513 ISTGLDLVEGLAYDWIGHNLYWLDSKLNTIEVAKETGSNRMILVKENITQPRGMCLDPSP 1572
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G RWLFWTDWGENPRIERIGMDG+NRSTII+TKIYWPNGL LDIA +R+YFADSKLDFID
Sbjct: 1573 GARWLFWTDWGENPRIERIGMDGTNRSTIINTKIYWPNGLALDIANKRIYFADSKLDFID 1632
Query: 264 ------CKSLEIKTNVNY------STIFR-KLYWIDEGGNGVPLKIGKANMDGSNASILV 310
K +++ + +Y T+F +YW D N V + G N ++ V
Sbjct: 1633 TCLYDGSKRIQVLASSHYLLHPHSLTLFEDTMYWTDRQLNRV---LSAHKFYGVNQTV-V 1688
Query: 311 SGQLYEALALDLENGML 327
S + + L++ + + +L
Sbjct: 1689 SHLISQPLSIHVHHPVL 1705
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 151/307 (49%), Gaps = 46/307 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++ VC+ + DC + +DE C++ EC + C++ C TP C C PG L
Sbjct: 3103 CIDQQLVCNKEPDCADESDEPAHCNVDECAMVEMNQCAHKCIDTPTSYYCECNPGYRLLA 3162
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEG-YVLEYDNHTCKAINHSAAFLIIS 121
D C+D++EC E P CSQ C NT GS+ C CN Y D HTCK ++ ++I +
Sbjct: 3163 DGKACEDIDECVETPQVCSQQCQNTPGSFYCKCNHYWYERAADEHTCKRRDNITPWIIFT 3222
Query: 122 NRHSILVADLEEKGKDHRAQDIV-VSGLDL------------------------------ 150
N++ + ++ QD++ V LD
Sbjct: 3223 NKYYVRNMSIDALNYSLMHQDLINVVALDADYADQMLYFCDVTAKTIFRAPIAGGEKEAI 3282
Query: 151 -------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+EG+A DWIG +YWLD ++V + NGTNR L I PR +++ P
Sbjct: 3283 IRHDSLGLEGIAIDWIGRKLYWLDRHAKHLDVAELNGTNRKTLLT-GIADPRAIVV--HP 3339
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDF 261
GT +L++T W I ++GMDGSN + I++ I WPN LT+D T R+++AD+ LD+
Sbjct: 3340 GTGYLYFTSWHLQAYIGKMGMDGSNFTRILTWEDDIAWPNALTIDYFTDRIFWADAHLDY 3399
Query: 262 IDCKSLE 268
I LE
Sbjct: 3400 IAFADLE 3406
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 145/301 (48%), Gaps = 50/301 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C++ +++CDGKTDC + ADE C C C C +P G +C CP G IL+ND
Sbjct: 285 CIDRSQICDGKTDCEDKADEEATCSSVICTSL--ACGYKCRASPTGGVCYCPAGWILAND 342
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC D +EC + G+C Q+C NT+GSY CSC G++L+ N C+A H L +
Sbjct: 343 STTCIDRDECSEWGFCEQLCKNTEGSYTCSCAPGFILQGLNK-CRAQQHPGVKLELLVAQ 401
Query: 125 SILVADLEEKGKDHR--AQDIVVSGLDLV-----------------------EG------ 153
V + G+D A SG+D + EG
Sbjct: 402 EKAVWRMSSNGEDRTIVANTTSASGVDYLYSRDLLLWSDVKTKKVHSEPLNGEGSSSRVA 461
Query: 154 -----------LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+A DWIG +Y +DS + +I+V + +G + N+T P + LDP+
Sbjct: 462 IYLTSSWGPVSIAVDWIGEKLYVVDSVVQKIDVLELDGRYHGIALSSNLTNPTDIGLDPT 521
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G ++ ++ R+ R MDG+ I+ Y +G+ +D+ RR+++ DS+LD+I
Sbjct: 522 VGLMFI-----ADSKRVLRANMDGTVDFPIVFEAAYKVSGIAVDVIARRIFWCDSQLDYI 576
Query: 263 D 263
+
Sbjct: 577 E 577
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 166/376 (44%), Gaps = 85/376 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE--CKHKFGLCSNTCHP-TPLGALCTCPPGEI 60
+C++ TK+CD DC + +DE GC + G CS+ CH T G +C C PG I
Sbjct: 3966 KCIDRTKLCDFADDCGDSSDE-LGCHHNKPCLDSNKGGCSHYCHNITEGGYICACYPGYI 4024
Query: 61 LS-NDSVTCQDMNECEQPGY-CSQMCTNTKGSYICSCNEGYVLEYDNHT--CKAINHSAA 116
+S N+ C+D++EC + CSQ+CTN G+Y CSC +G+ L DN + C+A++ +
Sbjct: 4025 ISQNNRKHCEDIDECVTGQHQCSQLCTNLNGTYSCSCRQGFELS-DNRSGVCRAVDTNMM 4083
Query: 117 FL-------------------IISNRHSILVADLEEK--------GKDHR---------- 139
L +I+N + D + + G D+
Sbjct: 4084 ILFANGPGIRAYDPYDKQEIEVIANEKRVQALDFDPRSEYVFWIDGYDNSIKRSYMVNAK 4143
Query: 140 --------AQDIVVSGLDLVEGLAYDWIGGHIYWLD------SRLNRIEVCDENGTNRIV 185
AQD+ + + LA DWI G++YW + + RI V +G R
Sbjct: 4144 GGQVKIGYAQDLNIKSESGLTSLAMDWISGNLYWTEFDSSGTTLFGRIMVSKADGRYRRS 4203
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
L + P +++DP G W D G P+IE MDG R ++S +I P LT+
Sbjct: 4204 LITVGLEIPTSIVVDPELGK--AIWADAGSQPKIEIAWMDGDRRKQLVSDRIGQPIALTI 4261
Query: 246 DIATRRV-YFADSKLDFIDC------------KSLEIKTNVNYSTIFRKLYWI------- 285
D + + V Y+ADSKL+ I+ K +K ++ LYWI
Sbjct: 4262 DYSMQHVLYWADSKLNTIESIEQDGSNRKIILKGDSLKHPISLDVFENSLYWITRRTGEL 4321
Query: 286 ---DEGGNGVPLKIGK 298
D+ G GVP I K
Sbjct: 4322 IRQDKFGRGVPEIIIK 4337
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 178/435 (40%), Gaps = 110/435 (25%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT---CPPGEI 60
+C+ CDG+ DC + +DE GC K K CSN P +C C ++
Sbjct: 3058 KCIRKQFHCDGQDDCGDHSDED-GCPP---KMKNMTCSN-----PKEFMCANGNCIDQQL 3108
Query: 61 LSNDSVTCQDMNECEQPGYC-------------SQMCTNTKGSYICSCNEGYVLEYDNHT 107
+ N C D E ++P +C + C +T SY C CN GY L D
Sbjct: 3109 VCNKEPDCAD--ESDEPAHCNVDECAMVEMNQCAHKCIDTPTSYYCECNPGYRLLADGKA 3166
Query: 108 CKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD 167
C+ I+ + ++ + Q+ S + + YW +
Sbjct: 3167 CEDIDECVETPQVCSQ---------------QCQNTPGSF----------YCKCNHYWYE 3201
Query: 168 SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227
DE+ R +DNIT W+ +T+ + + +D
Sbjct: 3202 ------RAADEHTCKR----RDNITP-------------WIIFTN---KYYVRNMSIDAL 3235
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFAD--------------SKLDFIDCKSLEIKTNV 273
N S ++ + L D A + +YF D K I SL ++ +
Sbjct: 3236 NYS-LMHQDLINVVALDADYADQMLYFCDVTAKTIFRAPIAGGEKEAIIRHDSLGLE-GI 3293
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
I RKLYW+D + + A ++G+N L++G + + A+ + G
Sbjct: 3294 AIDWIGRKLYWLDRHAKHLDV----AELNGTNRKTLLTG-IADPRAIVVHPG-------- 3340
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDF 391
T +L++T W I ++GMDGSN + I++ I WPN LT+D T R+++AD+ LD+
Sbjct: 3341 -TGYLYFTSWHLQAYIGKMGMDGSNFTRILTWEDDIAWPNALTIDYFTDRIFWADAHLDY 3399
Query: 392 IDFCNYDGTGRQQVI 406
I F + +G R++V+
Sbjct: 3400 IAFADLEGHNRRKVL 3414
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 75/126 (59%), Gaps = 6/126 (4%)
Query: 141 QDIVVSGL--DLVEGLAYDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRG 196
Q IV G+ + + GLA DW+ ++Y+ + N +EVC +G+NR VL K PR
Sbjct: 2143 QHIVKQGIGSNGIRGLAIDWVAENMYFTNVFPHDNYVEVCKLDGSNRKVLVKKTTDSPRE 2202
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ ++P ++L+W D+G+ PR+ + +DGSN +I+++ I P +T+D T VY+ D
Sbjct: 2203 LAVNPI--KKYLYWIDYGQYPRLGKAYLDGSNWMSIVTSGISTPRDITIDPITHDVYWVD 2260
Query: 257 SKLDFI 262
SK D I
Sbjct: 2261 SKQDTI 2266
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 89/185 (48%), Gaps = 42/185 (22%)
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EG++YDW +YW DS N I D NG+N +++A+ + +PR +++DP G+ L++T
Sbjct: 2471 EGISYDWTQKKVYWTDSSNNSIYAMDLNGSNLVMIAR--VDRPRAIVVDPCNGS--LYFT 2526
Query: 212 DWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
DWG + +I + M GS + II + P+GL +D
Sbjct: 2527 DWGRFGTSGKIFKTTMAGSLKKAIIDKDLSQPSGLAIDYED------------------- 2567
Query: 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLY 328
R LYW D V KI ++ +DGSN ILVS +Y A+ + +Y
Sbjct: 2568 -----------RMLYWTD----AVREKIERSELDGSNRQILVSATIY-PFAITVFREHIY 2611
Query: 329 YSTLK 333
++ L+
Sbjct: 2612 WTDLQ 2616
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 72/126 (57%), Gaps = 4/126 (3%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDP 201
++ S + VEGLA DW+ ++Y++DSR + V N T R L K N+ +PR +++ P
Sbjct: 775 VLASQNEGVEGLAVDWVAKNLYYIDSRKGTLNVLSTRNVTYRRTLLK-NLKRPRAIVIHP 833
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
+ G ++F+++W I R DGSN + + WPNGL +D A R+Y+ D+ LD
Sbjct: 834 NQG--YIFFSEWDRPANISRAYTDGSNLIVFKNXSLGWPNGLAIDFAKDRLYWCDALLDH 891
Query: 262 IDCKSL 267
+ +L
Sbjct: 892 VQHSNL 897
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 133/334 (39%), Gaps = 72/334 (21%)
Query: 80 CSQMC----TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL-VADLEEK 134
C +C T +G Y C C G+ L + + +L++ I+ VA L
Sbjct: 1718 CDHLCLLSPTKPQG-YTCKCQVGFRL----FNGQCLEEEIPYLMVLRGSQIVDVALLPRS 1772
Query: 135 GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT---------NRIV 185
K +V G++ + + YD IYWL ++ + DENGT NR
Sbjct: 1773 IKTGYITPVV--GVESGKFIDYDRXEKMIYWLQTKDDD----DENGTIYTTPYNGGNRTE 1826
Query: 186 LAKDNITQPRGMMLDPSP-GTRWL----FWTDWGENPRIERIGMDGSNRSTIISTKIYWP 240
N + G++ PS WL +W + N IE I +DG R I +
Sbjct: 1827 FP--NASGESGIVGAPSAMAFDWLGRNCYWNKYASN--IEAIKIDGKIRYRTI---VLAN 1879
Query: 241 NGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+G +A + D + ++W+D+G G+P+KIG+ N
Sbjct: 1880 DGNKTSVAKPKAMCVDP--------------------LEGHIFWVDDGSFGIPMKIGRVN 1919
Query: 301 MDGSNASILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNR 359
MDG+N ILV + EA+ +D+ +Y+S+L I I DG N
Sbjct: 1920 MDGTNPIILVDNVERPEAITIDIPTKTIYFSSLY------------PALIMAISTDGQNL 1967
Query: 360 STIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
TI+S I P L + ++Y D D I+
Sbjct: 1968 RTIVSQNIALPKALA--VHDSKLYLLDPLYDKIE 1999
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGSN +LV L + ++L+W D+G+ PR+ + +DGSN
Sbjct: 2184 LDGSNRKVLVKKTTDSPRELAVN---------PIKKYLYWIDYGQYPRLGKAYLDGSNWM 2234
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403
+I+++ I P +T+D T VY+ DSK D I +Y G RQ
Sbjct: 2235 SIVTSGISTPRDITIDPITHDVYWVDSKQDTIQKVSYTGGNRQ 2277
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
++Y +K+YW D N I +++GSN ++ A+ +D NG LY++
Sbjct: 2473 ISYDWTQKKVYWTDSSNNS----IYAMDLNGSNLVMIARVDRPRAIVVDPCNGSLYFTD- 2527
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
W +G + +I + M GS + II + P+GL +D R +Y+ D+ + I
Sbjct: 2528 -------WGRFGTSGKIFKTTMAGSLKKAIIDKDLSQPSGLAIDYEDRMLYWTDAVREKI 2580
Query: 393 DFCNYDGTGRQQVI 406
+ DG+ RQ ++
Sbjct: 2581 ERSELDGSNRQILV 2594
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 93/217 (42%), Gaps = 37/217 (17%)
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
ENP I T+IS I P G++ D ++VY+ DS + I L V
Sbjct: 2453 ENPSSSEI-------HTLISKGIN-PEGISYDWTQKKVYWTDSSNNSIYAMDLNGSNLVM 2504
Query: 275 YSTIFR-----------KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALD 321
+ + R LY+ D G G KI K M GS ++ L + LA+D
Sbjct: 2505 IARVDRPRAIVVDPCNGSLYFTDWGRFGTSGKIFKTTMAGSLKKAIIDKDLSQPSGLAID 2564
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 381
E+ MLY WTD +IER +DGSNR ++S IY P +T +
Sbjct: 2565 YEDRMLY-----------WTD-AVREKIERSELDGSNRQILVSATIY-PFAIT--VFREH 2609
Query: 382 VYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+Y+ D +L + + TG +V L+ + + DL
Sbjct: 2610 IYWTDLQLRGV-YRAEKHTGANKVELVKRLEDSPRDL 2645
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 120/335 (35%), Gaps = 98/335 (29%)
Query: 78 GYCSQMCTNTKGS-------YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
G C MC T S Y C+C+ G+ L D C + FL+ S + I
Sbjct: 662 GGCQHMCIVTAASDQENRLGYRCACDIGWRLSSDQRNCNLVQE---FLMYSQQRFI---- 714
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
KG R D V+ G I + SR R
Sbjct: 715 ---KG---RVLDPVMEGF-----------SDAISPVVSRRARF----------------- 740
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ LD ++++++D ++ I R+ G+ R +++++ GL +D +
Sbjct: 741 ------VGLDYDAYDQYIYYSDVLQD-VIYRVRQSGAGREVVLASQNEGVEGLAVDWVAK 793
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
+Y+ DS+ ++ S NV Y K N+ A ++
Sbjct: 794 NLYYIDSRKGTLNVLSTR---NVTYRRTLLK------------------NLKRPRAIVIH 832
Query: 311 SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 370
Q Y +F+++W I R DGSN + + WP
Sbjct: 833 PNQGY----------------------IFFSEWDRPANISRAYTDGSNLIVFKNXSLGWP 870
Query: 371 NGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
NGL +D A R+Y+ D+ LD + N +GT + V
Sbjct: 871 NGLAIDFAKDRLYWCDALLDHVQHSNLNGTDVRSV 905
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 152 EGLAYDWIGGHIYWLDS-------RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ + D + GHI+W+D ++ R+ + +GTN I+L DN+ +P + +D
Sbjct: 1890 KAMCVDPLEGHIFWVDDGSFGIPMKIGRVNM---DGTNPIILV-DNVERPEAITIDIP-- 1943
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
T+ ++++ I I DG N TI+S I P L + ++Y D D I+
Sbjct: 1944 TKTIYFSSLYP-ALIMAISTDGQNLRTIVSQNIALPKALA--VHDSKLYLLDPLYDKIE- 1999
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+++ N +TI ID L I K + G + + +G
Sbjct: 2000 -RVDLPDGSNPTTI------IDNDSELKTLTIYKKRVTGDHPCFVNNG 2040
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 107/301 (35%), Gaps = 54/301 (17%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
IV V G+A D I I+W DS+L+ IE D G NR+++ + T PS
Sbjct: 546 IVFEAAYKVSGIAVDVIARRIFWCDSQLDYIETADYLGRNRVMVLRGTHT--------PS 597
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
P R T+ +IYW +G I + D + I
Sbjct: 598 P------------------------TRLTLFENRIYWTDGTKQAIMSVDKTEGDYSIRTI 633
Query: 263 ----DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA-SILVSGQLYEA 317
D K+++I + + + G + I A D N + +
Sbjct: 634 YKMRDAKAIKILHPLTQPMVSNPCG--NNNGGCQHMCIVTAASDQENRLGYRCACDIGWR 691
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
L+ D N L L ++ F +P +E S ++S + + GL D
Sbjct: 692 LSSDQRNCNLVQEFLMYSQQRFIKGRVLDPVMEGF---SDAISPVVSRRARFV-GLDYDA 747
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLY 437
+ +Y++D D I G GR+ V+ + GV LA+D LY
Sbjct: 748 YDQYIYYSDVLQDVIYRVRQSGAGREVVL-----------ASQNEGVEGLAVDWVAKNLY 796
Query: 438 Y 438
Y
Sbjct: 797 Y 797
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 87/212 (41%), Gaps = 35/212 (16%)
Query: 197 MMLDPSPGTRWLFWTDWGEN--PRIERIGMDGSNRSTIISTKI--YWPNGLTLDIATRRV 252
+ +D W++W ++ I R+ +G+ I+ I GL +D +
Sbjct: 2108 LHVDVYTAGNWIYWVEFNRGMWNGIFRVRPNGTELQHIVKQGIGSNGIRGLAIDWVAENM 2167
Query: 253 YFAD----------SKLDFIDCKSLEIKT-----NVNYSTIFRKLYWIDEGGNGVPLKIG 297
YF + KLD + K L KT + + I + LYWID G ++G
Sbjct: 2168 YFTNVFPHDNYVEVCKLDGSNRKVLVKKTTDSPRELAVNPIKKYLYWIDYGQYP---RLG 2224
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGS 357
KA +DGSN +V+ + + ++ T ++W D ++ I+++ G
Sbjct: 2225 KAYLDGSNWMSIVTSGISTPRDITID---------PITHDVYWVDSKQD-TIQKVSYTGG 2274
Query: 358 NRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
NR I + PN + + I VY+ D L
Sbjct: 2275 NRQII---RRNLPNPMGVAIYGNDVYWVDRNL 2303
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 61/142 (42%), Gaps = 26/142 (18%)
Query: 317 ALALDLENGMLYYSTLKCTRW----LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
+ LDL G+ Y W L+W D N IE GSNR ++ I P G
Sbjct: 1514 STGLDLVEGLAY-------DWIGHNLYWLDSKLN-TIEVAKETGSNRMILVKENITQPRG 1565
Query: 373 LTLDIA--TRRVYFAD-SKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALAL 429
+ LD + R +++ D + I+ DGT R +I + NG LAL
Sbjct: 1566 MCLDPSPGARWLFWTDWGENPRIERIGMDGTNRSTII--------NTKIYWPNG---LAL 1614
Query: 430 DLENGMLYYSTEGAEFLKTPLF 451
D+ N +Y++ +F+ T L+
Sbjct: 1615 DIANKRIYFADSKLDFIDTCLY 1636
>gi|340729715|ref|XP_003403142.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Bombus terrestris]
Length = 4608
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/377 (52%), Positives = 239/377 (63%), Gaps = 56/377 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V DRCVN++ VCDGK DCPNGADEGP CD EC+ + CS C TPLG CTCPPG+
Sbjct: 1333 VTDRCVNISSVCDGKFDCPNGADEGPACDFEECRGAY--CSYHCIQTPLGKQCTCPPGQE 1390
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
L D CQD+NECE PG CSQ C N K Y C C +GY LE D HTCKA N SAAFLII
Sbjct: 1391 LGKDGYDCQDVNECEPPGRCSQTCVNIKRGYYCGCVDGYTLEKDKHTCKAFNRSAAFLII 1450
Query: 121 SNRHSILVADLEEKG-------------------------------------KDHRAQDI 143
SNRH+ILVADL+E+ ++ D+
Sbjct: 1451 SNRHTILVADLQEQALERVPINVENVVATASNMHTGTIFWSDMKLKKISRLDRNSDPVDV 1510
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ +GLDLVEGLAYDWIG ++YWLDS+LN IEV E GTNR++L K+NITQPRGM LDPSP
Sbjct: 1511 ISTGLDLVEGLAYDWIGQNLYWLDSKLNTIEVVKETGTNRMILVKENITQPRGMCLDPSP 1570
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G RWLFWTDWGENPRIERIGMDG+NRSTII+TKIYWPNGL LDIA +R+YFADSK DFID
Sbjct: 1571 GARWLFWTDWGENPRIERIGMDGTNRSTIINTKIYWPNGLALDIANKRIYFADSKFDFID 1630
Query: 264 ------CKSLEIKTNVNY------STIFR-KLYWIDEGGNGVPLKIGKANMDGSNASILV 310
K +++ +Y T+F +YW D N V + G N ++ V
Sbjct: 1631 TCLYDGTKRIQVLAGSHYLLHPHSLTLFEDTMYWTDRQLNRV---LSAHKFYGVNQTV-V 1686
Query: 311 SGQLYEALALDLENGML 327
S + + L++ + + L
Sbjct: 1687 SHLISQPLSIHVNHPAL 1703
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 46/307 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++ VC+ + DC + +DE C++ EC + C++ C TP C C PG L
Sbjct: 3103 CIDAQLVCNKEPDCADESDEPAHCNIDECAVVEMNQCAHKCIDTPTSYYCECNPGYRLLE 3162
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEG-YVLEYDNHTCKAINHSAAFLIIS 121
D C+D++EC E P CSQ C NT GS+ C CN Y D HTCK ++ +++ +
Sbjct: 3163 DGKACEDIDECMETPQVCSQQCQNTPGSFYCKCNHYWYERAADEHTCKRRDNIIPWIVFT 3222
Query: 122 NRHSILVADLEEKGKDHRAQDIV-VSGLDL------------------------------ 150
N++ + ++ QD++ V LD
Sbjct: 3223 NKYYVRNMSIDASNYSLMHQDLINVVALDADYAEQMLYFCDVTAKTIFRAPIAGGEKEAI 3282
Query: 151 -------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+EG+A DW+G +YWLD ++V + NGTNR L I PR +++ P
Sbjct: 3283 IRHDSLGLEGIAIDWVGKKLYWLDRHAKHLDVAELNGTNRKTLLT-GIADPRAIVV--HP 3339
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDF 261
GT +L++T W I ++GMDGSN + I++ I WPN LT+D T R+++AD+ LD+
Sbjct: 3340 GTGYLYFTSWHLQAYIGKMGMDGSNFTRILTWEDDIAWPNALTIDYFTDRIFYADAHLDY 3399
Query: 262 IDCKSLE 268
I LE
Sbjct: 3400 IAFADLE 3406
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 162/353 (45%), Gaps = 65/353 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C++ +++CDGK+DC + ADE C C LC C +P G +C CPPG +L+ND
Sbjct: 286 CIDRSQICDGKSDCEDKADEEATCSSVICTSL--LCRYKCRASPTGGVCYCPPGWVLAND 343
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL------ 118
S TC D +EC + G+C Q+C NT+GSY CSC G+ L+ N C+A H L
Sbjct: 344 STTCIDRDECSEWGFCEQLCQNTEGSYTCSCAPGFTLQARNK-CRAQQHPGVKLELLVAQ 402
Query: 119 ---------------IISN------------RHSILVADLEEK----------GKDHRAQ 141
I+ N R + +D++ K G R
Sbjct: 403 ERAVWRMSSSAEDRTIVVNTTGASGVDYFYSRDLLFWSDVKTKKVHSEPLNGEGSSSRVA 462
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+ S V +A DWIG +Y +DS + +I+V + +G + N+T P + LDP
Sbjct: 463 IYLTSSWGPV-AIAVDWIGEKLYVVDSVVQKIDVLELDGRFHGIALSSNLTNPADIGLDP 521
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
+ G ++ +N ++ R MDG+ I+ Y +G+ +D+ RR+++ DS+LD+
Sbjct: 522 TVGLMFI-----ADNKQVLRANMDGTADFPIVFEAAYKVSGIAVDVIARRIFWCDSQLDY 576
Query: 262 IDC------------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMD 302
I+ + + + + K+YW D G + + K + D
Sbjct: 577 IETADYFGRNRVMVLRGQQTPSPTRLTLFENKIYWTD-GTKQAIMSVDKTDSD 628
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 114/196 (58%), Gaps = 26/196 (13%)
Query: 219 IERIGMDGSN----RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKS--LEIKTN 272
+ER+ ++ N S + + I+W D+ +++ D D +D S L++
Sbjct: 1466 LERVPINVENVVATASNMHTGTIFWS-----DMKLKKISRLDRNSDPVDVISTGLDLVEG 1520
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYS 330
+ Y I + LYW+D N + + G+N ILV + + + LD G
Sbjct: 1521 LAYDWIGQNLYWLDSKLNTIEV----VKETGTNRMILVKENITQPRGMCLDPSPG----- 1571
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 390
RWLFWTDWGENPRIERIGMDG+NRSTII+TKIYWPNGL LDIA +R+YFADSK D
Sbjct: 1572 ----ARWLFWTDWGENPRIERIGMDGTNRSTIINTKIYWPNGLALDIANKRIYFADSKFD 1627
Query: 391 FIDFCNYDGTGRQQVI 406
FID C YDGT R QV+
Sbjct: 1628 FIDTCLYDGTKRIQVL 1643
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 165/376 (43%), Gaps = 85/376 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE--CKHKFGLCSNTCHP-TPLGALCTCPPGEI 60
+C++ +K+CD DC + +DE GC + + G CS+ CH T G +C C G I
Sbjct: 3966 KCIDRSKLCDFADDCGDSSDE-LGCHHNKPCLESNKGGCSHYCHNITDAGYICACYLGYI 4024
Query: 61 LS-NDSVTCQDMNECEQPGY-CSQMCTNTKGSYICSCNEGYVLEYDNHT--CKAINHSAA 116
++ +D C+D++EC + CSQ+CTN G+Y CSC +G+ L DN + CKA++
Sbjct: 4025 IAQDDRKHCEDIDECATGQHQCSQLCTNLNGTYSCSCRQGFELS-DNRSGVCKALDTDMM 4083
Query: 117 FL-------------------IISNRHSILVADLEEK--------GKDHR---------- 139
L +I+N + D + K G D+
Sbjct: 4084 ILFANGPGIRAYDPHSKEEIDVIANEKRVQALDFDPKSEYVFWIDGYDNSIKRSYMVNAK 4143
Query: 140 --------AQDIVVSGLDLVEGLAYDWIGGHIYWLD------SRLNRIEVCDENGTNRIV 185
AQD+ + + LA DWI G++YW + + R+ V +G R
Sbjct: 4144 GGQVKIGYAQDLNIKSESGLTSLAVDWISGNLYWTEIDSSGATLFGRVMVSKADGRYRRS 4203
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
L + P +++DP G W D G P+IE MDG R ++ +I P LT+
Sbjct: 4204 LITVGLEIPTSIVVDPELGR--AIWADVGSQPKIEIAWMDGDRRKQLVYDRIGQPIALTI 4261
Query: 246 DIATRRV-YFADSKLDFIDC------------KSLEIKTNVNYSTIFRKLYWI------- 285
D + + V Y+ADSKL+ I+ K ++ V+ T LYW+
Sbjct: 4262 DYSMQHVLYWADSKLNTIESIEQDGSNRKVILKGDSLRHPVSLDTFENNLYWVTRRSAEL 4321
Query: 286 ---DEGGNGVPLKIGK 298
D+ G GVP I K
Sbjct: 4322 FRQDKFGRGVPELIVK 4337
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 177/435 (40%), Gaps = 110/435 (25%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT---CPPGEI 60
+C+ CDG+ DC + +DE GC K K C P P +C C ++
Sbjct: 3058 KCIRKQFHCDGQDDCGDHSDED-GCPP---KTKSMTC-----PNPKDFMCANGNCIDAQL 3108
Query: 61 LSNDSVTCQDMNECEQPGYC-------------SQMCTNTKGSYICSCNEGYVLEYDNHT 107
+ N C D E ++P +C + C +T SY C CN GY L D
Sbjct: 3109 VCNKEPDCAD--ESDEPAHCNIDECAVVEMNQCAHKCIDTPTSYYCECNPGYRLLEDGKA 3166
Query: 108 CKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD 167
C+ I+ + ++ + Q+ S + + YW +
Sbjct: 3167 CEDIDECMETPQVCSQ---------------QCQNTPGSF----------YCKCNHYWYE 3201
Query: 168 SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227
DE+ R +DNI W+ +T+ + + +D S
Sbjct: 3202 ------RAADEHTCKR----RDNIIP-------------WIVFTN---KYYVRNMSIDAS 3235
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFAD--------------SKLDFIDCKSLEIKTNV 273
N S ++ + L D A + +YF D K I SL ++ +
Sbjct: 3236 NYS-LMHQDLINVVALDADYAEQMLYFCDVTAKTIFRAPIAGGEKEAIIRHDSLGLE-GI 3293
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
+ +KLYW+D + + A ++G+N L++G + + A+ + G
Sbjct: 3294 AIDWVGKKLYWLDRHAKHLDV----AELNGTNRKTLLTG-IADPRAIVVHPG-------- 3340
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDF 391
T +L++T W I ++GMDGSN + I++ I WPN LT+D T R+++AD+ LD+
Sbjct: 3341 -TGYLYFTSWHLQAYIGKMGMDGSNFTRILTWEDDIAWPNALTIDYFTDRIFYADAHLDY 3399
Query: 392 IDFCNYDGTGRQQVI 406
I F + +G R++V+
Sbjct: 3400 IAFADLEGHNRRKVL 3414
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 141 QDIVVSGL--DLVEGLAYDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRG 196
Q +V G+ + + GLA DW+ G++Y+ + N +EVC +G+NR VL K PR
Sbjct: 2143 QHVVKQGIGSNGIRGLAIDWVAGNMYFTNVFPHDNYVEVCKLDGSNRKVLVKKTTDSPRE 2202
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ ++P ++L+W D+G+ PR+ + +DGSN + I+++ I P +T+D T VY+ D
Sbjct: 2203 LAVNPI--KKYLYWIDYGQYPRLGKAYLDGSNWTPIVTSGISTPRDITIDPDTHDVYWVD 2260
Query: 257 SKLDFI 262
SK D I
Sbjct: 2261 SKQDTI 2266
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 100/233 (42%), Gaps = 53/233 (22%)
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EG++YDW +YW DS N I D +G+N +++A+ + +PR +++DP G+ L++T
Sbjct: 2471 EGISYDWTQKKVYWTDSSNNSIYAMDLDGSNLVMIAR--VDRPRAIVVDPCNGS--LYFT 2526
Query: 212 DWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
DWG + +I R M GS + II + P+GL +D
Sbjct: 2527 DWGRFGTSGKIFRTTMAGSLKKAIIDKDLSQPSGLAIDYED------------------- 2567
Query: 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLY 328
R LYW D V KI ++ +DG+N ILVS +Y
Sbjct: 2568 -----------RMLYWTD----AVREKIERSELDGNNRQILVSATIYP------------ 2600
Query: 329 YSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 381
++ ++FWTD G+N+ ++ P L + A R+
Sbjct: 2601 FAITVFGEYIFWTDLQLRGVYRAEKHTGANKVELVKRLEDSPRDLHIYSAARQ 2653
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 99/237 (41%), Gaps = 58/237 (24%)
Query: 78 GYCSQMCTNTKGS-------YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
G C MC T S Y C+C+ G+ L D C + FL+ S + I
Sbjct: 662 GGCQHMCIVTAASDQENRLGYRCACDIGWRLSSDQRNCNLVQE---FLMYSQQRFIKGRV 718
Query: 131 LEEK-------------------GKDHRAQD-------------------------IVVS 146
L+ G D+ A D ++ S
Sbjct: 719 LDPVMEGFSDAISPVVSRRARFVGLDYDAHDQYIYYSDVLQDVIYRVRQSGTGRDVVLAS 778
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+ VEGLA DW ++Y++DSR + V N T R L K N+ +PR +++ P+ G
Sbjct: 779 QNEGVEGLAVDWAAKNLYYIDSRKGTLNVLSTRNVTYRRTLLK-NLKRPRAIVIHPNQG- 836
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
++F+++W I R DGSN + + WPNGL +D A R+Y+ D+ LD +
Sbjct: 837 -YIFFSEWDRPANISRAYTDGSNLVVFKNLTLGWPNGLAIDFAKDRLYWCDALLDHV 892
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 138/350 (39%), Gaps = 71/350 (20%)
Query: 80 CSQMC----TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
C+ +C TN +G Y C C G+ L+Y+ + +L++ I+ L G
Sbjct: 1716 CAHLCLLSPTNPQG-YTCKCQVGFKLQYNG---QCTEEEMPYLMVLRGSQIVDVSLI-PG 1770
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT---------NRIVL 186
V G++ + + YD IYWL ++ + DENGT NR
Sbjct: 1771 STKTGYITPVVGVEGGKFIDYDRKERMIYWLQTKDDD----DENGTIYTTPYNGGNRTEF 1826
Query: 187 AKDNITQPRGMMLDPSP------GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 240
N T G++ PS G + N IE I +DG R I +
Sbjct: 1827 P--NPTGESGIVGAPSAMAFDWLGRNLFIGNKYASN--IEAIKVDGKIRYRTI---VLVN 1879
Query: 241 NGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+G +A + D + ++W+D+G G+P+KIG+ N
Sbjct: 1880 DGNKTSVAKPKAMCVDP--------------------LEGHIFWVDDGSFGIPMKIGRVN 1919
Query: 301 MDGSNASILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNR 359
MDG+N ILV EA+ +D+ + +Y+S+L RI I DG N
Sbjct: 1920 MDGTNPIILVDNVGRPEAITIDIPSKTIYFSSLY------------PARITAISTDGRNL 1967
Query: 360 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
TI+S I P L + ++Y D D I+ + G G +ID
Sbjct: 1968 RTIVSENIALPKALA--VHDNKLYLLDPSYDKIERVDLPG-GSNPTTIID 2014
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 30/206 (14%)
Query: 219 IERIGMDGSNRSTIISTKIYWPN--GLTLDIATRRVYFAD----SKLDFIDC---KSLEI 269
I IG+D N S ++ N G+ D +++ F +K+ ++ S EI
Sbjct: 2401 IRAIGLDPQNTSVPFNSIGNLTNVVGVDFDYRDKKLLFTQIRPWAKIAWMQADNPSSSEI 2460
Query: 270 KT---------NVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
T ++Y +K+YW D N I ++DGSN ++ A+ +
Sbjct: 2461 HTLISKGINPEGISYDWTQKKVYWTDSSNNS----IYAMDLDGSNLVMIARVDRPRAIVV 2516
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
D NG LY++ W +G + +I R M GS + II + P+GL +D R
Sbjct: 2517 DPCNGSLYFTD--------WGRFGTSGKIFRTTMAGSLKKAIIDKDLSQPSGLAIDYEDR 2568
Query: 381 RVYFADSKLDFIDFCNYDGTGRQQVI 406
+Y+ D+ + I+ DG RQ ++
Sbjct: 2569 MLYWTDAVREKIERSELDGNNRQILV 2594
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGSN +LV L + ++L+W D+G+ PR+ + +DGSN +
Sbjct: 2184 LDGSNRKVLVKKTTDSPRELAVN---------PIKKYLYWIDYGQYPRLGKAYLDGSNWT 2234
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMG 420
I+++ I P +T+D T VY+ DSK D I +Y G G +Q+I +L + G
Sbjct: 2235 PIVTSGISTPRDITIDPDTHDVYWVDSKQDTIQKVSYTG-GSRQIIRRNLPNPMGVAIYG 2293
Query: 421 D 421
D
Sbjct: 2294 D 2294
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 94/227 (41%), Gaps = 46/227 (20%)
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN 272
W + ++ S T+IS I P G++ D ++VY+ DS + I L+
Sbjct: 2444 WAKIAWMQADNPSSSEIHTLISKGIN-PEGISYDWTQKKVYWTDSSNNSIYAMDLDGSNL 2502
Query: 273 VNYSTIFR-----------KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALA 319
V + + R LY+ D G G KI + M GS ++ L + LA
Sbjct: 2503 VMIARVDRPRAIVVDPCNGSLYFTDWGRFGTSGKIFRTTMAGSLKKAIIDKDLSQPSGLA 2562
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL---- 375
+D E+ MLY WTD +IER +DG+NR ++S IY P +T+
Sbjct: 2563 IDYEDRMLY-----------WTD-AVREKIERSELDGNNRQILVSATIY-PFAITVFGEY 2609
Query: 376 ----DIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
D+ R VY A+ TG +V L+ + + DL
Sbjct: 2610 IFWTDLQLRGVYRAEKH-----------TGANKVELVKRLEDSPRDL 2645
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 153/422 (36%), Gaps = 91/422 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ + VCDG DC +G+DE C C +C P G+ P G+ L D
Sbjct: 241 CIPRSYVCDGYKDCHDGSDEK-SCTTTACPPNKFVC-------PRGS----PDGKPLCID 288
Query: 65 -SVTCQDMNECEQPG--------------YCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
S C ++CE C C + +C C G+VL D+ TC
Sbjct: 289 RSQICDGKSDCEDKADEEATCSSVICTSLLCRYKCRASPTGGVCYCPPGWVLANDSTTCI 348
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
+ + + L + E A + + + G + L ++
Sbjct: 349 DRDECSEWGFCEQ----LCQNTEGSYTCSCAPGFTLQARNKCRAQQHP--GVKLELLVAQ 402
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG--- 226
+ + +R ++ N T G +D LFW+D + ++ ++G
Sbjct: 403 ERAVWRMSSSAEDRTIVV--NTTGASG--VDYFYSRDLLFWSDV-KTKKVHSEPLNGEGS 457
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWID 286
S+R I T + P + +D ++Y DS
Sbjct: 458 SSRVAIYLTSSWGPVAIAVDWIGEKLYVVDS----------------------------- 488
Query: 287 EGGNGVPLKIGKANMDGSNASILVSGQLYEA--LALDLENGMLYYSTLKCTRWLFWTDWG 344
V KI +DG I +S L + LD G+++ +
Sbjct: 489 -----VVQKIDVLELDGRFHGIALSSNLTNPADIGLDPTVGLMFIA-------------- 529
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
+N ++ R MDG+ I+ Y +G+ +D+ RR+++ DS+LD+I+ +Y G R
Sbjct: 530 DNKQVLRANMDGTADFPIVFEAAYKVSGIAVDVIARRIFWCDSQLDYIETADYFGRNRVM 589
Query: 405 VI 406
V+
Sbjct: 590 VL 591
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 29/207 (14%)
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVV-----SGLDLVEGLAYDWIGGHIYWLDS---- 168
L I N+++ + ++ GK ++V + + + + D + GHI+W+D
Sbjct: 1851 LFIGNKYASNIEAIKVDGKIRYRTIVLVNDGNKTSVAKPKAMCVDPLEGHIFWVDDGSFG 1910
Query: 169 ---RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD 225
++ R+ + +GTN I+L DN+ +P + +D P F + + RI I D
Sbjct: 1911 IPMKIGRVNM---DGTNPIILV-DNVGRPEAITID-IPSKTIYFSSLYPA--RITAISTD 1963
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
G N TI+S I P L + ++Y D D I+ +++ N +TI I
Sbjct: 1964 GRNLRTIVSENIALPKALA--VHDNKLYLLDPSYDKIE--RVDLPGGSNPTTI------I 2013
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSG 312
D L I K + G + + +G
Sbjct: 2014 DNDSELKTLTIYKKRVTGDHPCFIRNG 2040
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 120/318 (37%), Gaps = 60/318 (18%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G C Q+C + G+ +C+C Y + ++ +C+ A + + D +E
Sbjct: 2040 GGCEQICLPASGGTRVCACGMEY-RKVNDTSCEPFKSFAVVTQLDVARGYSLKDAKEA-- 2096
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD---SRLNRIEVCDENGTNRIVLAKDNITQ 193
I G ++ Y G IYW++ N I NGT + K I
Sbjct: 2097 ---MVPIAGVGHHILHVDVYS-AGNWIYWVEFNRGMWNGIFRVRPNGTELQHVVKQGIGS 2152
Query: 194 P--RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
RG+ +D G + F + + +E +DGSNR ++ P L ++
Sbjct: 2153 NGIRGLAIDWVAGNMY-FTNVFPHDNYVEVCKLDGSNRKVLVKKTTDSPRELAVN----- 2206
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
I + LYWID G ++GKA +DGSN + +V+
Sbjct: 2207 -------------------------PIKKYLYWIDYGQYP---RLGKAYLDGSNWTPIVT 2238
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
+ + ++ T ++W D ++ I+++ G +R I + PN
Sbjct: 2239 SGISTPRDITIDPD---------THDVYWVDSKQD-TIQKVSYTGGSRQII---RRNLPN 2285
Query: 372 GLTLDIATRRVYFADSKL 389
+ + I VY+ D L
Sbjct: 2286 PMGVAIYGDYVYWVDRNL 2303
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 33/164 (20%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRW----LFWTDWGENPRIE 350
KI + + + ++ +G LDL G+ Y W L+W D N IE
Sbjct: 1497 KISRLDRNSDPVDVISTG-------LDLVEGLAY-------DWIGQNLYWLDSKLN-TIE 1541
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIA--TRRVYFAD-SKLDFIDFCNYDGTGRQQVIL 407
+ G+NR ++ I P G+ LD + R +++ D + I+ DGT R +I
Sbjct: 1542 VVKETGTNRMILVKENITQPRGMCLDPSPGARWLFWTDWGENPRIERIGMDGTNRSTII- 1600
Query: 408 IDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKTPLF 451
+ NG LALD+ N +Y++ +F+ T L+
Sbjct: 1601 -------NTKIYWPNG---LALDIANKRIYFADSKFDFIDTCLY 1634
>gi|350411403|ref|XP_003489337.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Bombus impatiens]
Length = 4608
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/377 (52%), Positives = 239/377 (63%), Gaps = 56/377 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V DRCVN++ VCDGK DCPNGADEGP CD EC+ + CS C TPLG CTCPPG+
Sbjct: 1333 VTDRCVNISSVCDGKFDCPNGADEGPACDFEECRGAY--CSYHCIQTPLGKQCTCPPGQE 1390
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
L D CQD+NECE PG CSQ C N K Y C C +GY LE D HTCKA N SAAFLII
Sbjct: 1391 LGKDGYDCQDVNECEPPGRCSQTCVNIKRGYYCGCVDGYTLEKDKHTCKAFNRSAAFLII 1450
Query: 121 SNRHSILVADLEEKG-------------------------------------KDHRAQDI 143
SNRH+ILVADL+E+ ++ D+
Sbjct: 1451 SNRHTILVADLQEQALERVPINVENVVATASNMHTGTIFWSDMKLKKISRLDRNSDPVDV 1510
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ +GLDLVEGLAYDWIG ++YWLDS+LN IEV E GTNR++L K+NITQPRGM LDPSP
Sbjct: 1511 ISTGLDLVEGLAYDWIGQNLYWLDSKLNTIEVVKETGTNRMILVKENITQPRGMCLDPSP 1570
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G RWLFWTDWGENPRIERIGMDG+NRSTII+TKIYWPNGL LDIA +R+YFADSK DFID
Sbjct: 1571 GARWLFWTDWGENPRIERIGMDGTNRSTIINTKIYWPNGLALDIANKRIYFADSKFDFID 1630
Query: 264 ------CKSLEIKTNVNY------STIFR-KLYWIDEGGNGVPLKIGKANMDGSNASILV 310
K +++ +Y T+F +YW D N V + G N ++ V
Sbjct: 1631 TCLYDGTKRIQVLAGSHYLLHPHSLTLFEDTMYWTDRQLNRV---LSAHKFYGVNQTV-V 1686
Query: 311 SGQLYEALALDLENGML 327
S + + L++ + + L
Sbjct: 1687 SHLISQPLSIHVNHPAL 1703
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 152/307 (49%), Gaps = 46/307 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+++ VC+ + DC + +DE C++ EC + C++ C TP C C PG L
Sbjct: 3103 CIDMQLVCNKEPDCADESDEPAHCNIDECAVVEMNQCAHKCIDTPTSYYCECNPGYRLLE 3162
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEG-YVLEYDNHTCKAINHSAAFLIIS 121
D C+D++EC E P CSQ C NT GS+ C CN Y D HTCK ++ ++I +
Sbjct: 3163 DGKACEDIDECMETPQVCSQQCQNTPGSFYCKCNHYWYERAADEHTCKRRDNIIPWIIFT 3222
Query: 122 NRHSILVADLEEKGKDHRAQDIV-VSGLDL------------------------------ 150
N++ + ++ QD++ V LD
Sbjct: 3223 NKYYVRNMSIDASNYSLMHQDLINVVALDADYAEQMLYFCDVTAKTIFRAPIAGGEKEAI 3282
Query: 151 -------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+EG+A DW+G +YWLD ++V + NGTNR L I PR +++ P
Sbjct: 3283 IRHDSLGLEGIAIDWVGKKLYWLDRHAKHLDVAELNGTNRKTLLT-GIADPRAIVV--HP 3339
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDF 261
GT +L++T W I ++GMDGSN + I++ I WPN LT+D T R+++AD+ LD+
Sbjct: 3340 GTGYLYFTSWHLQAYIGKMGMDGSNFTRILTWEDDIAWPNALTIDYFTDRIFYADAHLDY 3399
Query: 262 IDCKSLE 268
I LE
Sbjct: 3400 IAFADLE 3406
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 162/353 (45%), Gaps = 65/353 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C++ +++CDGK+DC + ADE C C LC C +P G +C CPPG +L+ND
Sbjct: 286 CIDRSQICDGKSDCEDKADEEATCSSVICTSL--LCRYKCRASPTGGVCYCPPGWVLAND 343
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL------ 118
S TC D +EC + G+C Q+C NT+GSY CSC G+ L+ N C+A H L
Sbjct: 344 STTCIDRDECSEWGFCEQLCQNTEGSYTCSCAPGFTLQARNK-CRAQQHPGVKLELLVAQ 402
Query: 119 ---------------IISN------------RHSILVADLEEK----------GKDHRAQ 141
I+ N R + +D++ K G R
Sbjct: 403 ERAVWRMSSSAEDRTIVVNTTGASGVDYFYSRDLLFWSDVKTKKVHSEPLNGEGSSSRVA 462
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+ S V +A DWIG +Y +DS + +I+V + +G + N+T P + LDP
Sbjct: 463 IYLTSSWGPV-AIAVDWIGEKLYVVDSVVQKIDVLELDGRFHGIALSSNLTNPADIGLDP 521
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
+ G ++ +N ++ R MDG+ I+ Y +G+ +D+ RR+++ DS+LD+
Sbjct: 522 TVGLMFI-----ADNKQVLRANMDGTADFPIVFEAAYKVSGIAVDVIARRIFWCDSQLDY 576
Query: 262 IDC------------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMD 302
I+ + + + + K+YW D G + + K + D
Sbjct: 577 IETADYFGRNRVMVLRGQQTPSPTRLTLFENKIYWTD-GTKQAIMSVDKTDSD 628
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 114/196 (58%), Gaps = 26/196 (13%)
Query: 219 IERIGMDGSN----RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKS--LEIKTN 272
+ER+ ++ N S + + I+W D+ +++ D D +D S L++
Sbjct: 1466 LERVPINVENVVATASNMHTGTIFWS-----DMKLKKISRLDRNSDPVDVISTGLDLVEG 1520
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYS 330
+ Y I + LYW+D N + + G+N ILV + + + LD G
Sbjct: 1521 LAYDWIGQNLYWLDSKLNTIEV----VKETGTNRMILVKENITQPRGMCLDPSPG----- 1571
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 390
RWLFWTDWGENPRIERIGMDG+NRSTII+TKIYWPNGL LDIA +R+YFADSK D
Sbjct: 1572 ----ARWLFWTDWGENPRIERIGMDGTNRSTIINTKIYWPNGLALDIANKRIYFADSKFD 1627
Query: 391 FIDFCNYDGTGRQQVI 406
FID C YDGT R QV+
Sbjct: 1628 FIDTCLYDGTKRIQVL 1643
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 166/376 (44%), Gaps = 85/376 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE--CKHKFGLCSNTCHP-TPLGALCTCPPGEI 60
+C++ +K+CD DC + +DE GC + + G CS+ CH T G +C C PG I
Sbjct: 3966 KCIDRSKLCDFADDCGDSSDE-LGCHHNKPCLESNKGGCSHYCHNITDAGYICACYPGYI 4024
Query: 61 LS-NDSVTCQDMNECEQPGY-CSQMCTNTKGSYICSCNEGYVLEYDNHT--CKAINHSAA 116
++ +D C+D++EC + CSQ+CTN G+Y CSC +G+ L DN + CKA++
Sbjct: 4025 IAQDDRKHCEDIDECATGQHQCSQLCTNLNGTYSCSCRQGFELS-DNRSGVCKALDTDMM 4083
Query: 117 FL-------------------IISNRHSILVADLEEK--------GKDHR---------- 139
L +I+N + D + K G D+
Sbjct: 4084 ILFANGPGIRAYDPHNKEEIDVIANEKRVQALDFDPKSEYVFWIDGYDNSIKRSYMVNAK 4143
Query: 140 --------AQDIVVSGLDLVEGLAYDWIGGHIYWLD------SRLNRIEVCDENGTNRIV 185
AQD+ + + LA DWI G++YW + + R+ V +G R
Sbjct: 4144 GGQVKIGYAQDLNIKSESGLTSLAVDWISGNLYWTEIDSSGATLFGRVMVSKADGRYRRS 4203
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
L + P +++DP G W D G P+IE MDG R ++ +I P LT+
Sbjct: 4204 LITVGLEIPTSIVVDPELGR--AIWADVGSQPKIEIAWMDGDRRKQLVYDRIGQPIALTI 4261
Query: 246 DIATRRV-YFADSKLDFIDC------------KSLEIKTNVNYSTIFRKLYWI------- 285
D + + V Y+ADSKL+ I+ K ++ V+ T LYW+
Sbjct: 4262 DYSMQHVLYWADSKLNTIESIEQDGSNRKVILKGDSLRHPVSLDTFENNLYWVTRRSAEL 4321
Query: 286 ---DEGGNGVPLKIGK 298
D+ G GVP I K
Sbjct: 4322 FRQDKFGRGVPELIVK 4337
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 176/435 (40%), Gaps = 110/435 (25%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT---CPPGEI 60
+C+ CDG+ DC + +DE C K NT P P +C C ++
Sbjct: 3058 KCIRKQFHCDGQDDCGDHSDED------GCPPKV---KNTVCPNPKDFMCANGNCIDMQL 3108
Query: 61 LSNDSVTCQDMNECEQPGYC-------------SQMCTNTKGSYICSCNEGYVLEYDNHT 107
+ N C D E ++P +C + C +T SY C CN GY L D
Sbjct: 3109 VCNKEPDCAD--ESDEPAHCNIDECAVVEMNQCAHKCIDTPTSYYCECNPGYRLLEDGKA 3166
Query: 108 CKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD 167
C+ I+ + ++ + Q+ S + + YW +
Sbjct: 3167 CEDIDECMETPQVCSQ---------------QCQNTPGSF----------YCKCNHYWYE 3201
Query: 168 SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227
DE+ R +DNI W+ +T+ + + +D S
Sbjct: 3202 ------RAADEHTCKR----RDNIIP-------------WIIFTN---KYYVRNMSIDAS 3235
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFAD--------------SKLDFIDCKSLEIKTNV 273
N S ++ + L D A + +YF D K I SL ++ +
Sbjct: 3236 NYS-LMHQDLINVVALDADYAEQMLYFCDVTAKTIFRAPIAGGEKEAIIRHDSLGLE-GI 3293
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
+ +KLYW+D + + A ++G+N L++G + + A+ + G
Sbjct: 3294 AIDWVGKKLYWLDRHAKHLDV----AELNGTNRKTLLTG-IADPRAIVVHPG-------- 3340
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDF 391
T +L++T W I ++GMDGSN + I++ I WPN LT+D T R+++AD+ LD+
Sbjct: 3341 -TGYLYFTSWHLQAYIGKMGMDGSNFTRILTWEDDIAWPNALTIDYFTDRIFYADAHLDY 3399
Query: 392 IDFCNYDGTGRQQVI 406
I F + +G R++V+
Sbjct: 3400 IAFADLEGHNRRKVL 3414
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 141 QDIVVSGL--DLVEGLAYDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRG 196
Q +V G+ + + GLA DW+ G++Y+ + N +EVC +G+NR VL K PR
Sbjct: 2143 QHVVKQGIGSNGIRGLAIDWVAGNMYFTNVFPHDNYVEVCKLDGSNRKVLVKKTTDSPRE 2202
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ ++P ++L+W D+G+ PR+ + +DGSN + I+++ I P +T+D T VY+ D
Sbjct: 2203 LAVNPI--KKYLYWIDYGQYPRLGKAYLDGSNWTPIVTSGISTPRDITIDPDTHDVYWVD 2260
Query: 257 SKLDFI 262
SK D I
Sbjct: 2261 SKQDTI 2266
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 100/233 (42%), Gaps = 53/233 (22%)
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EG++YDW +YW DS N I D +G+N +++A+ + +PR +++DP G+ L++T
Sbjct: 2471 EGISYDWTQKKVYWTDSSNNSIYAMDLDGSNLVMIAR--VDRPRAIVVDPCNGS--LYFT 2526
Query: 212 DWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
DWG + +I R M GS + II + P+GL +D
Sbjct: 2527 DWGRFGTSGKIFRTTMAGSLKKAIIDKDLSQPSGLAIDYED------------------- 2567
Query: 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLY 328
R LYW D V KI ++ +DG+N ILVS +Y
Sbjct: 2568 -----------RMLYWTD----AVREKIERSELDGNNRQILVSATIYP------------ 2600
Query: 329 YSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 381
++ ++FWTD G+N+ ++ P L + A R+
Sbjct: 2601 FAITVFGEYIFWTDLQLRGVYRAEKHTGANKVELVKRLEDSPRDLHIYSAARQ 2653
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 136/348 (39%), Gaps = 70/348 (20%)
Query: 80 CSQMC----TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
C +C TN +G Y C C G+ L+Y N CK +L++ I+ L G
Sbjct: 1716 CDHLCLLSPTNPQG-YTCKCQVGFKLQY-NGQCK--EEEMPYLMVLRGSQIVDVSLV-PG 1770
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT---------NRIVL 186
V G++ + + YD IYWL ++ + DENGT NR
Sbjct: 1771 STKTGYITPVVGVEGGKFIDYDKRERMIYWLQTKDDD----DENGTIYTTPYNGGNRTEF 1826
Query: 187 AKDNITQPRGMMLDPSP------GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 240
N T G++ PS G + N IE I +DG R I +
Sbjct: 1827 P--NPTGESGIVGAPSAMAFDWLGRNLFIGNKYASN--IEAIKVDGKIRYRTI---VLVN 1879
Query: 241 NGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+G +A + D + ++W+D+G G+P+KIG+ N
Sbjct: 1880 DGNKTSVAKPKAMCVDP--------------------LEGHIFWVDDGSFGIPMKIGRVN 1919
Query: 301 MDGSNASILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNR 359
MDG+N ILV EA+ +D+ + +Y+S+L RI I DG N
Sbjct: 1920 MDGTNPIILVDNVGRPEAITIDIPSKTIYFSSLY------------PARITAISTDGRNL 1967
Query: 360 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
TI+S I P L + ++Y D D I+ G G I+
Sbjct: 1968 RTIVSENIALPKALA--VHDNKLYLLDPSYDKIERVELPGGGNPTTII 2013
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 99/237 (41%), Gaps = 58/237 (24%)
Query: 78 GYCSQMCTNTKGS-------YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
G C MC T S Y C+C+ G+ L D C + FL+ S + I
Sbjct: 662 GGCQHMCIVTAASDQENRLGYRCACDIGWRLSSDQRNCNLVQE---FLMYSQQRFIKGRV 718
Query: 131 LEEK-------------------GKDHRAQD-------------------------IVVS 146
L+ G D+ A D ++ S
Sbjct: 719 LDPVMEGFSDAISPVVSRRARFVGLDYDAHDQYIYYSDVLQDVIYRVRQSGTGRDVVLAS 778
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+ VEGLA DW ++Y++DSR + V N T R L K N+ +PR +++ P+ G
Sbjct: 779 QNEGVEGLAVDWAAKNLYYIDSRKGTLNVLSTRNVTYRRTLLK-NLKRPRAIVIHPNQG- 836
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
++F+++W I R DGSN + + WPNGL +D A R+Y+ D+ LD +
Sbjct: 837 -YIFFSEWDRPANISRAYTDGSNLVVFKNLTLGWPNGLAIDFAKDRLYWCDALLDHV 892
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 30/206 (14%)
Query: 219 IERIGMDGSNRSTIISTKIYWPN--GLTLDIATRRVYFAD----SKLDFIDC---KSLEI 269
I IG+D N S ++ N G+ D +++ F +K+ ++ S EI
Sbjct: 2401 IRAIGLDPQNTSVPFNSIGNLTNVVGVDFDYRDKKLLFTQIRPWAKIAWMQADNPSSSEI 2460
Query: 270 KT---------NVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
T ++Y +K+YW D N I ++DGSN ++ A+ +
Sbjct: 2461 HTLISKGINPEGISYDWTQKKVYWTDSSNNS----IYAMDLDGSNLVMIARVDRPRAIVV 2516
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
D NG LY++ W +G + +I R M GS + II + P+GL +D R
Sbjct: 2517 DPCNGSLYFTD--------WGRFGTSGKIFRTTMAGSLKKAIIDKDLSQPSGLAIDYEDR 2568
Query: 381 RVYFADSKLDFIDFCNYDGTGRQQVI 406
+Y+ D+ + I+ DG RQ ++
Sbjct: 2569 MLYWTDAVREKIERSELDGNNRQILV 2594
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGSN +LV L + ++L+W D+G+ PR+ + +DGSN +
Sbjct: 2184 LDGSNRKVLVKKTTDSPRELAVN---------PIKKYLYWIDYGQYPRLGKAYLDGSNWT 2234
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMG 420
I+++ I P +T+D T VY+ DSK D I +Y G G +Q+I +L + G
Sbjct: 2235 PIVTSGISTPRDITIDPDTHDVYWVDSKQDTIQKVSYTG-GSRQIIRRNLPNPMGVAIYG 2293
Query: 421 D 421
D
Sbjct: 2294 D 2294
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 94/227 (41%), Gaps = 46/227 (20%)
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN 272
W + ++ S T+IS I P G++ D ++VY+ DS + I L+
Sbjct: 2444 WAKIAWMQADNPSSSEIHTLISKGIN-PEGISYDWTQKKVYWTDSSNNSIYAMDLDGSNL 2502
Query: 273 VNYSTIFR-----------KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALA 319
V + + R LY+ D G G KI + M GS ++ L + LA
Sbjct: 2503 VMIARVDRPRAIVVDPCNGSLYFTDWGRFGTSGKIFRTTMAGSLKKAIIDKDLSQPSGLA 2562
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL---- 375
+D E+ MLY WTD +IER +DG+NR ++S IY P +T+
Sbjct: 2563 IDYEDRMLY-----------WTD-AVREKIERSELDGNNRQILVSATIY-PFAITVFGEY 2609
Query: 376 ----DIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
D+ R VY A+ TG +V L+ + + DL
Sbjct: 2610 IFWTDLQLRGVYRAEKH-----------TGANKVELVKRLEDSPRDL 2645
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 153/422 (36%), Gaps = 91/422 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ + VCDG DC +G+DE C C +C P G+ P G+ L D
Sbjct: 241 CIPRSYVCDGYKDCHDGSDEK-SCTTTACPPNKFVC-------PRGS----PDGKPLCID 288
Query: 65 -SVTCQDMNECEQPG--------------YCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
S C ++CE C C + +C C G+VL D+ TC
Sbjct: 289 RSQICDGKSDCEDKADEEATCSSVICTSLLCRYKCRASPTGGVCYCPPGWVLANDSTTCI 348
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
+ + + L + E A + + + G + L ++
Sbjct: 349 DRDECSEWGFCEQ----LCQNTEGSYTCSCAPGFTLQARNKCRAQQHP--GVKLELLVAQ 402
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG--- 226
+ + +R ++ N T G +D LFW+D + ++ ++G
Sbjct: 403 ERAVWRMSSSAEDRTIVV--NTTGASG--VDYFYSRDLLFWSDV-KTKKVHSEPLNGEGS 457
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWID 286
S+R I T + P + +D ++Y DS
Sbjct: 458 SSRVAIYLTSSWGPVAIAVDWIGEKLYVVDS----------------------------- 488
Query: 287 EGGNGVPLKIGKANMDGSNASILVSGQLYEA--LALDLENGMLYYSTLKCTRWLFWTDWG 344
V KI +DG I +S L + LD G+++ +
Sbjct: 489 -----VVQKIDVLELDGRFHGIALSSNLTNPADIGLDPTVGLMFIA-------------- 529
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
+N ++ R MDG+ I+ Y +G+ +D+ RR+++ DS+LD+I+ +Y G R
Sbjct: 530 DNKQVLRANMDGTADFPIVFEAAYKVSGIAVDVIARRIFWCDSQLDYIETADYFGRNRVM 589
Query: 405 VI 406
V+
Sbjct: 590 VL 591
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 29/207 (14%)
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVV-----SGLDLVEGLAYDWIGGHIYWLDS---- 168
L I N+++ + ++ GK ++V + + + + D + GHI+W+D
Sbjct: 1851 LFIGNKYASNIEAIKVDGKIRYRTIVLVNDGNKTSVAKPKAMCVDPLEGHIFWVDDGSFG 1910
Query: 169 ---RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD 225
++ R+ + +GTN I+L DN+ +P + +D P F + + RI I D
Sbjct: 1911 IPMKIGRVNM---DGTNPIILV-DNVGRPEAITID-IPSKTIYFSSLYPA--RITAISTD 1963
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
G N TI+S I P L + ++Y D D I+ +E+ N +TI I
Sbjct: 1964 GRNLRTIVSENIALPKALA--VHDNKLYLLDPSYDKIE--RVELPGGGNPTTI------I 2013
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSG 312
D L I K + G + + +G
Sbjct: 2014 DNDSELKTLTIYKKRVTGDHPCFIKNG 2040
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 120/318 (37%), Gaps = 60/318 (18%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G C Q+C + G+ +C+C Y + ++ +C+ A + + D +E
Sbjct: 2040 GGCEQICLPASGGTRVCACGMEY-RKVNDTSCEPFKSFAVVTQLDVARGYSLKDAKEA-- 2096
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD---SRLNRIEVCDENGTNRIVLAKDNITQ 193
I G ++ Y G IYW++ N I NGT + K I
Sbjct: 2097 ---MVPIAGVGHHILHVDVYS-AGNWIYWVEFNRGMWNGIFRVRPNGTELQHVVKQGIGS 2152
Query: 194 P--RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
RG+ +D G + F + + +E +DGSNR ++ P L ++
Sbjct: 2153 NGIRGLAIDWVAGNMY-FTNVFPHDNYVEVCKLDGSNRKVLVKKTTDSPRELAVN----- 2206
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
I + LYWID G ++GKA +DGSN + +V+
Sbjct: 2207 -------------------------PIKKYLYWIDYGQYP---RLGKAYLDGSNWTPIVT 2238
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
+ + ++ T ++W D ++ I+++ G +R I + PN
Sbjct: 2239 SGISTPRDITIDPD---------THDVYWVDSKQD-TIQKVSYTGGSRQII---RRNLPN 2285
Query: 372 GLTLDIATRRVYFADSKL 389
+ + I VY+ D L
Sbjct: 2286 PMGVAIYGDYVYWVDRNL 2303
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 26/142 (18%)
Query: 317 ALALDLENGMLYYSTLKCTRW----LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
+ LDL G+ Y W L+W D N IE + G+NR ++ I P G
Sbjct: 1512 STGLDLVEGLAY-------DWIGQNLYWLDSKLN-TIEVVKETGTNRMILVKENITQPRG 1563
Query: 373 LTLDIA--TRRVYFAD-SKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALAL 429
+ LD + R +++ D + I+ DGT R +I + NG LAL
Sbjct: 1564 MCLDPSPGARWLFWTDWGENPRIERIGMDGTNRSTII--------NTKIYWPNG---LAL 1612
Query: 430 DLENGMLYYSTEGAEFLKTPLF 451
D+ N +Y++ +F+ T L+
Sbjct: 1613 DIANKRIYFADSKFDFIDTCLY 1634
>gi|322797679|gb|EFZ19688.1| hypothetical protein SINV_80786 [Solenopsis invicta]
Length = 612
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/378 (52%), Positives = 242/378 (64%), Gaps = 59/378 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECK-----HKFGLCSNTCHPTPLGALCTCPPGE 59
C+ + CDG DCP+ +DE C +C+ H+ GLC+N C TPLGA CTCP GE
Sbjct: 206 CIPRSWYCDGTADCPDKSDEPESCGKVDCQPGFFSHQGGLCTNACFQTPLGAQCTCPTGE 265
Query: 60 ILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI 119
LS+D TCQD+NECE G CSQ+C NTKGSY CSC EGY L+ D HTCKA NHSAAFLI
Sbjct: 266 ELSSDGFTCQDINECEPQGKCSQLCVNTKGSYYCSCVEGYTLDADKHTCKAFNHSAAFLI 325
Query: 120 ISNRHSILVADLEEKG-------------------------------------KDHRAQD 142
ISNRH+ILVADL+++ + QD
Sbjct: 326 ISNRHTILVADLQDQALERVPINVENVVATASNMHTGTIFWSDMKLKRISRLDRGSDPQD 385
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ +GLDLVEGLAYDWIG ++YWLDS+LN IEV E G R++L K+NITQPRGM LDPS
Sbjct: 386 IISTGLDLVEGLAYDWIGQNLYWLDSKLNTIEVAKETGVGRMILVKENITQPRGMCLDPS 445
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
PG RWLFWTDWGENPRIERIGMDG+NRSTIISTKIYWPNGL LDIA RR+YFADSKLDFI
Sbjct: 446 PGARWLFWTDWGENPRIERIGMDGTNRSTIISTKIYWPNGLALDIANRRIYFADSKLDFI 505
Query: 263 D------CKSLEIKTNVNY------STIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
D K L++ + +Y T+F +YW D N V + GSN ++
Sbjct: 506 DTCLYDGSKRLQVLASSHYLLHPHSLTLFEDTMYWTDRQLNRV---LSAHKFKGSNQTV- 561
Query: 310 VSGQLYEALALDLENGML 327
VS + + L++ + + +L
Sbjct: 562 VSHLISQPLSIHVHHAVL 579
>gi|357622730|gb|EHJ74141.1| hypothetical protein KGM_12959 [Danaus plexippus]
Length = 4358
Score = 360 bits (924), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 194/377 (51%), Positives = 236/377 (62%), Gaps = 55/377 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V++RCVN+T+VCD DCPNGADEGP CD C+ LC N C TP G LC CP GE
Sbjct: 1301 VSNRCVNITQVCDRNFDCPNGADEGPACDFDNCQRGATLC-NECIQTPEGPLCLCPSGEE 1359
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
L ++ TC+D++EC PG CSQ+CTNTK SY CSC EGY L D H+CKA NHS+AFLII
Sbjct: 1360 LESNGYTCKDIDECNPPGLCSQVCTNTKRSYFCSCVEGYQLAPDKHSCKANNHSSAFLII 1419
Query: 121 SNRHSILVADLEEKG-------------------------------------KDHRAQDI 143
SNRHSILVADL+E+G + Q I
Sbjct: 1420 SNRHSILVADLDEQGLERVPINVENVVATASNMHTGTIFWSDMKLKKISRLDRGSEPQVI 1479
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ +GLDLVEGLAYDW+GG+IYWLDS+LN IEV E+G+ R L NITQPRGM LDP+P
Sbjct: 1480 ISTGLDLVEGLAYDWVGGNIYWLDSKLNTIEVAKEDGSARTALLSGNITQPRGMCLDPAP 1539
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
RWLFWTDWGENPRIER+GMDG+ R II+TKIYWPNGLTLD AT+RVYFADSKLDFID
Sbjct: 1540 NARWLFWTDWGENPRIERVGMDGTQRMAIINTKIYWPNGLTLDTATQRVYFADSKLDFID 1599
Query: 264 ------CKSLEIKTNVNY------STIFR-KLYWIDEGGNGVPLKIGKANMDGSNASILV 310
++ +Y T+F LYW D N V + G+N ++ V
Sbjct: 1600 FCYYNGTGRQQVLAGSHYLLHPHSLTLFEDTLYWTDRQLNRV---LSAHKFKGTNQTV-V 1655
Query: 311 SGQLYEALALDLENGML 327
S + + L++ + + L
Sbjct: 1656 SHLISQPLSIHVHHPSL 1672
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 108/313 (34%), Positives = 160/313 (51%), Gaps = 48/313 (15%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEIL 61
++C++ VC+ +DC + +DE C++ EC K + C + C T G C C G L
Sbjct: 3073 NQCIDNRLVCNKVSDCTDDSDEPAHCNVDECAKLEIHQCGHKCIDTLTGYYCECNQGYKL 3132
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYV-LEYDNHTCKAINHSAAFLI 119
+D C D++EC E PG CSQ C+NT GSY C CNE Y E D HTCK +++ A++I
Sbjct: 3133 LSDGKACADIDECLETPGVCSQYCSNTPGSYYCKCNEQYYEREADEHTCKRKDNTTAWII 3192
Query: 120 ISNR--------------------------------HSILVADLEEK-------GKDHRA 140
+N+ H + AD+ K +
Sbjct: 3193 FTNKYYVRNMSTDATLYNLMHQDLMNVVAIDFDIKEHKMYFADVSAKTIYRSDYTDPNPT 3252
Query: 141 QDIVVSGLDL-VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
++IV+ +EG+A DWIG +YWLD ++V + +GT R L K I PR +++
Sbjct: 3253 KEIVIRHDSHGLEGIAVDWIGRKLYWLDRHSKNLDVSELDGTRRKTL-KTGIADPRAIVV 3311
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADS 257
PGT +L++T W I ++GMDGSN + I++ I WPN LT+D T R+Y+AD+
Sbjct: 3312 --HPGTGYLYYTSWHLQAYIGKMGMDGSNYTVILNWEDDIAWPNALTIDYFTDRIYWADA 3369
Query: 258 KLDFIDCKSLEIK 270
LD+I LE K
Sbjct: 3370 HLDYIGSADLEGK 3382
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 163/390 (41%), Gaps = 78/390 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C+ +++CD K DC +GADE C C C C +P G C+C G L++
Sbjct: 246 KCIARSQLCDNKRDCEDGADEEAACSTLSCPAL--ECEYKCVASPSGGACSCGSGLTLAS 303
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC D +EC + G C Q+C NT GSY C+C GY L ++ A+L +++
Sbjct: 304 DNKTCVDRDECREWGPCHQLCINTPGSYNCACAPGYTLGARG---DCLSAGGAWLALAHE 360
Query: 124 HSIL-------------------------VADLEEKGKDHR------------------- 139
+L +A+ G D+
Sbjct: 361 RGVLRLELPPPSPPSPALPPATPLRPPSTLANATATGIDYHYRRNLLFWSDVKTRKIHSM 420
Query: 140 -----------AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK 188
DI V+G LA DW+G +Y D+ +++V + +G V+
Sbjct: 421 QLNAPVGSNYVGNDISVAGSWAPVALAVDWVGDKLYVADALGQKVDVFELDGRWHAVVLG 480
Query: 189 DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248
N+T P + LDP+ G ++ ++ +I R MDG+N I+S Y +G+ +D
Sbjct: 481 SNLTSPADLALDPTLGLMFV-----ADSSQIVRANMDGTNVKAIVSEATYKASGIAVDTI 535
Query: 249 TRRVYFADSKLDFIDC------------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI 296
RR+++ DS LD+I+ + ++ + + ++YW D GV +
Sbjct: 536 ARRIFWCDSLLDYIETVDYDGNYRFLVLRGQQVPSPNRLALFEDRVYWSDSTKQGVS-SV 594
Query: 297 GKANMDGSNASILVSGQLYEALALDLENGM 326
K S SI + + E AL + + +
Sbjct: 595 NKYEGSSSIQSIYKTKDIREPKALTVVHSL 624
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 161/386 (41%), Gaps = 97/386 (25%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE---------CKHKFGLCSN-----TCHPTPL 49
+CVN K+CD DC + +DE GC A C+H C+N + P
Sbjct: 3692 QCVNREKLCDLADDCGDSSDE-LGCHHAHSCSVQDKGGCEH---FCTNLTLPDSSVPGTG 3747
Query: 50 GALCTCPPGEILSN-DSVTCQDMNECEQPGY-CSQMCTNTKGSYICSCNEGYVL-EYDNH 106
G +CTC G I+S DS C D++EC + CS +CTN GSY CSC +G+ L + +
Sbjct: 3748 GYICTCFQGWIISKADSKRCTDVDECATGAHHCSHICTNLNGSYSCSCKDGFRLADSLSG 3807
Query: 107 TCKAI-------------------NHSAAFLIISNRHSILVADLEEKG------------ 135
CK + + + F +I++ I D + K
Sbjct: 3808 ICKVMEDEVVLMFANGPEIRAFVQDKNEEFDVITSEKRIEAIDYDPKQEMVFWADSYDKT 3867
Query: 136 --------------KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN------RIEV 175
K AQD+ + G LA D+IG ++YW ++ R+ V
Sbjct: 3868 IKRSYMINALNGQVKSGFAQDLNMKGSSKPTALAVDYIGENLYWTETDRTGAKPRGRVMV 3927
Query: 176 CDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST 235
+G R L I P + L P G ++WTD G P+IE MDGS R II+
Sbjct: 3928 ARTDGRYRRALVSAGIESPTSLALAPQLGK--MYWTDAGSAPKIEIAWMDGSQRRPIITE 3985
Query: 236 KIYWPNGLTLDIAT-RRVYFADSKLDFID------------CKSLEIKTNVNYSTIFRKL 282
I P GL +D A +Y+AD+KL+ I+ K +K ++ L
Sbjct: 3986 NIRHPTGLAIDQAMDHAIYWADAKLNTIEMMKHDGTNRRVILKGDFLKHPLSLDVFESSL 4045
Query: 283 YWI----------DEGGNGVPLKIGK 298
YW+ D+ G GVPL I K
Sbjct: 4046 YWVTRDTGELVRQDKFGRGVPLVISK 4071
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 73/118 (61%), Gaps = 4/118 (3%)
Query: 147 GLDLVEGLAYDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
G + + GLA DW+ G++Y+ + N +E+ +GTNR V+ K + PR + ++P
Sbjct: 2122 GSNGIRGLAIDWVAGNLYFTNVFPHENYVEMSWLDGTNRKVIVKTTMDAPRELAVNPL-- 2179
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
R L+W D+G+ PRI + +DGSN T++S+ I P LT+D+ T VY+ DSKLD I
Sbjct: 2180 KRLLYWIDYGQYPRIGKAYLDGSNWQTVVSSGISNPRDLTIDMLTHDVYWVDSKLDQI 2237
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 186/482 (38%), Gaps = 101/482 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPT-PLGAL-CT---CPPG 58
RCV +VCDG +C +G+DE + LC+ P PL C C
Sbjct: 3647 RCVPRYQVCDGVDNCGDGSDE----------NNMTLCAARTKPCDPLTQFQCANRQCVNR 3696
Query: 59 EIL---------SNDSVTCQDMNEC--EQPGYCSQMCTNTK---------GSYICSCNEG 98
E L S+D + C + C + G C CTN G YIC+C +G
Sbjct: 3697 EKLCDLADDCGDSSDELGCHHAHSCSVQDKGGCEHFCTNLTLPDSSVPGTGGYICTCFQG 3756
Query: 99 YVL-EYDNHTCKAINHSA-AFLIISNRHSILVADLEEKGKD-HRAQDIVVSGLDLVEGLA 155
+++ + D+ C ++ A S+ + L KD R D + ++E
Sbjct: 3757 WIISKADSKRCTDVDECATGAHHCSHICTNLNGSYSCSCKDGFRLADSLSGICKVMEDEV 3816
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
+ + + R V D+N ++ ++ I +D P +FW D
Sbjct: 3817 V------LMFANGPEIRAFVQDKNEEFDVITSEKRIE-----AIDYDPKQEMVFWAD--- 3862
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNY 275
S TI + Y N L + + FA ++ K T +
Sbjct: 3863 -----------SYDKTI--KRSYMINALNGQVKSG---FAQD----LNMKGSSKPTALAV 3902
Query: 276 STIFRKLYWI--DEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYST 331
I LYW D G ++ A DG LVS + +LAL + G +Y
Sbjct: 3903 DYIGENLYWTETDRTGAKPRGRVMVARTDGRYRRALVSAGIESPTSLALAPQLGKMY--- 3959
Query: 332 LKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT-RRVYFADSKLD 390
WTD G P+IE MDGS R II+ I P GL +D A +Y+AD+KL+
Sbjct: 3960 --------WTDAGSAPKIEIAWMDGSQRRPIITENIRHPTGLAIDQAMDHAIYWADAKLN 4011
Query: 391 FIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYST-EGAEFLKTP 449
I+ +DGT R+ ++ D + L+LD+ LY+ T + E ++
Sbjct: 4012 TIEMMKHDGTNRRVILKGDFLKH------------PLSLDVFESSLYWVTRDTGELVRQD 4059
Query: 450 LF 451
F
Sbjct: 4060 KF 4061
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 135/339 (39%), Gaps = 80/339 (23%)
Query: 80 CSQMC---TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
C +C N Y C C GY L D K I +A+L++ I+ DL G
Sbjct: 1685 CQHLCLLSPNQSIPYTCMCKPGYKLLPDG---KCIEEESAYLMVLKGSQII--DLSPDGS 1739
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA-------KD 189
Q V G+ L YD G +YWL + I +E+ N + + K
Sbjct: 1740 GRAGQLPPVVGIQGGIQLDYDRQGHMLYWLQA----INAENEDDGNYTIYSMPYGGGNKV 1795
Query: 190 NIT-QPRGMMLDPSPGT-----RWLFWTDWGENPRIERIGMDGSNRSTII-------STK 236
T Q G++ PS R LF + + IE I +DG + I T
Sbjct: 1796 EFTGQDTGIVGSPSAIAFDWLGRNLFIANKAAS-NIELIRVDGKLKYRTIVFANDGSKTS 1854
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI 296
I P GL LD K+YW DEGG GVP KI
Sbjct: 1855 IAKPKGLCLDPTEG------------------------------KIYWSDEGGYGVPAKI 1884
Query: 297 GKANMDGSNASILV-SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
GK NMDG+N ILV S + EA+ +D++ ++Y+ST I + +
Sbjct: 1885 GKVNMDGTNPVILVNSIERPEAVTIDVDKKIVYFSTQY------------PASINSVNTE 1932
Query: 356 GSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDFI 392
G++R TI+S I +P + + R+Y D++ + I
Sbjct: 1933 GNDRKTILSEANAIAYPK--VIAVLDSRLYVLDTQYEKI 1969
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 43/196 (21%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q+I+ ++ EG++YDW +YW DS N I + +G+ +++A+ + +PR +++D
Sbjct: 2436 QNIISKNIN-PEGISYDWTQKKVYWTDSSNNSIYAMNLDGSELVMIAR--VERPRAIVVD 2492
Query: 201 PSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
P GT L++TDWG + +I R M GS + II + P+GLT+D F D+
Sbjct: 2493 PCNGT--LYYTDWGRFGTSGKIYRTTMAGSLKKAIIDKDLSQPSGLTID-------FDDN 2543
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
LYW D V KI ++ +DG++ +L+S +Y
Sbjct: 2544 -----------------------MLYWTD----AVREKIERSKLDGTDREVLISATIY-P 2575
Query: 318 LALDLENGMLYYSTLK 333
A+ + +Y++ L+
Sbjct: 2576 FAITVFGDYIYWTDLQ 2591
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 50/235 (21%)
Query: 81 SQMCTNTKG-----SYICSCNEGYVLEYDNHTCKAINH---------------------- 113
SQMC T Y C+CN GY LE D C +
Sbjct: 641 SQMCIVTALFMAGLGYRCACNIGYRLEADLRNCDIVKEFLMYSQQRFIKGKVLNPVIEGF 700
Query: 114 -SAAFLIISNRHSILVADLEEKGKD--------------HR---AQDIVVSGLDL-VEGL 154
A ++S R + D + + + HR ++IV++ + VEGL
Sbjct: 701 SDAILPVVSRRARFVGLDFDARDEHIYYSDVLQDVIYRVHRNGTTREIVLASQNEGVEGL 760
Query: 155 AYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
A DW ++Y++DSR + V N + + L KD + +PR +++ P+ G ++F+++W
Sbjct: 761 AVDWASKNLYYIDSRKGTLNVLSTRNFSYKRTLLKD-LKRPRAIVVHPNRG--YIFFSEW 817
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
I R DG+ + + WPNGL++D RVY+ D+ LD + L+
Sbjct: 818 DRPANISRANTDGTGLLVFENVTLGWPNGLSIDFEADRVYWCDALLDHVQHAKLD 872
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 112/477 (23%), Positives = 184/477 (38%), Gaps = 90/477 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD--LAECKHKFGLCSN--------------TCHPT 47
RC+N VCD DC +G+DEG C+ +C + C N C
Sbjct: 2991 RCINEGWVCDHDNDCGDGSDEGKQCNTQYKQCSAQEFRCQNFKCIRTHFRCDGEDDCGDH 3050
Query: 48 PLGALC-----TCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE 102
C TCP G+ N++ + C + C+ ++ C+ +E LE
Sbjct: 3051 SDEVDCMKENKTCPTGQFKCNNNQCIDNRLVCNKVSDCTD---DSDEPAHCNVDECAKLE 3107
Query: 103 YDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGH 162
K I+ + N+ L++D GK D + + + G +
Sbjct: 3108 IHQCGHKCIDTLTGYYCECNQGYKLLSD----GKACADIDECLETPGVCSQYCSNTPGSY 3163
Query: 163 IYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI 222
+ + E DE+ R KDN T W+ +T N R
Sbjct: 3164 YCKCNEQYYEREA-DEHTCKR----KDNTTA-------------WIIFT----NKYYVRN 3201
Query: 223 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS------KLDFID---CKSLEIKTN- 272
+ ++ + + DI ++YFAD + D+ D K + I+ +
Sbjct: 3202 MSTDATLYNLMHQDLMNVVAIDFDIKEHKMYFADVSAKTIYRSDYTDPNPTKEIVIRHDS 3261
Query: 273 -----VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGML 327
+ I RKLYW+D + + + +DG+ L +G + + A+ + G
Sbjct: 3262 HGLEGIAVDWIGRKLYWLDRHSKNLDV----SELDGTRRKTLKTG-IADPRAIVVHPG-- 3314
Query: 328 YYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFA 385
T +L++T W I ++GMDGSN + I++ I WPN LT+D T R+Y+A
Sbjct: 3315 -------TGYLYYTSWHLQAYIGKMGMDGSNYTVILNWEDDIAWPNALTIDYFTDRIYWA 3367
Query: 386 DSKLDFIDFCNYDGTGRQQV---------ILIDLMVEFTNDLMGDNGVPALALDLEN 433
D+ LD+I + +G R V I M +F ND D+ PA +N
Sbjct: 3368 DAHLDYIGSADLEGKHRHIVLSGSKNGRCIPKLWMCDFDNDCGDDSDEPAYMCRQKN 3424
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 60/105 (57%), Gaps = 9/105 (8%)
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DG+N ++V + L + + LK R L+W D+G+ PRI + +DGSN
Sbjct: 2155 LDGTNRKVIVKTTMDAPRELAV-------NPLK--RLLYWIDYGQYPRIGKAYLDGSNWQ 2205
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
T++S+ I P LT+D+ T VY+ DSKLD I +Y+G RQ +
Sbjct: 2206 TVVSSGISNPRDLTIDMLTHDVYWVDSKLDQIQKISYNGGNRQLI 2250
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
++Y +K+YW D N I N+DGS ++ + A+ +D NG LYY+
Sbjct: 2448 ISYDWTQKKVYWTDSSNN----SIYAMNLDGSELVMIARVERPRAIVVDPCNGTLYYTD- 2502
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
W +G + +I R M GS + II + P+GLT+D +Y+ D+ + I
Sbjct: 2503 -------WGRFGTSGKIYRTTMAGSLKKAIIDKDLSQPSGLTIDFDDNMLYWTDAVREKI 2555
Query: 393 DFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+ DGT R +V++ + F + GD
Sbjct: 2556 ERSKLDGTDR-EVLISATIYPFAITVFGD 2583
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 154/350 (44%), Gaps = 81/350 (23%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNR---IVLAKD----NITQPRGMMLDPSPGT 205
+A+DW+G +++ + + IE+ +G + IV A D +I +P+G+ LDP+ G
Sbjct: 1810 AIAFDWLGRNLFIANKAASNIELIRVDGKLKYRTIVFANDGSKTSIAKPKGLCLDPTEGK 1869
Query: 206 RWLFWTD---WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA---DSKL 259
++W+D +G +I ++ MDG+N I+ I P +T+D+ + VYF+ + +
Sbjct: 1870 --IYWSDEGGYGVPAKIGKVNMDGTN-PVILVNSIERPEAVTIDVDKKIVYFSTQYPASI 1926
Query: 260 DFIDCKSLEIKT------NVNYSTIF----RKLYWIDEGGNGVPLKIGKANM-DGSNASI 308
+ ++ + + KT + Y + +LY +D KI KA++ +G N +
Sbjct: 1927 NSVNTEGNDRKTILSEANAIAYPKVIAVLDSRLYVLDTQYE----KIFKADLPNGDNIKV 1982
Query: 309 LVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 367
++ + ++L + + M+++ CT+ N E+I + RS + I
Sbjct: 1983 ILDNESDLKSLTIFQKRKMIHHP---CTQ--------NNGGCEQICIPSEGRSRVCGCSI 2031
Query: 368 YWPNGLTLDIATRRVYFADSKLDFIDFCNYDG--------TGRQQVIL-IDLM------- 411
+ ++ + + S+LD I + +G TG+ IL +D+
Sbjct: 2032 GYRKENEVNCVPYKTFAVVSQLDLIRGYSLEGSAEAMIPVTGQGHYILHVDVHFAENYIY 2091
Query: 412 -VEFT---------------------NDLMGDNGVPALALDLENGMLYYS 439
+EF D +G NG+ LA+D G LY++
Sbjct: 2092 WIEFNRGQWNGIFRIRPNGSELQHVIKDGIGSNGIRGLAIDWVAGNLYFT 2141
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 131/322 (40%), Gaps = 62/322 (19%)
Query: 78 GYCSQMCTNTKG-SYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G C Q+C ++G S +C C+ GY E + + F ++S I LE +
Sbjct: 2011 GGCEQICIPSEGRSRVCGCSIGYRKENEVNCVPY----KTFAVVSQLDLIRGYSLEGSAE 2066
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD---SRLNRIEVCDENGTNRIVLAKDNITQ 193
A V + + + +IYW++ + N I NG+ + KD I
Sbjct: 2067 ---AMIPVTGQGHYILHVDVHFAENYIYWIEFNRGQWNGIFRIRPNGSELQHVIKDGIGS 2123
Query: 194 P--RGMMLDPSPGTRWLFWTD-WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
RG+ +D G L++T+ + +E +DG+NR I+ T + P L ++
Sbjct: 2124 NGIRGLAIDWVAGN--LYFTNVFPHENYVEMSWLDGTNRKVIVKTTMDAPRELAVN---- 2177
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
+ R LYWID G +IGKA +DGSN +V
Sbjct: 2178 --------------------------PLKRLLYWIDYGQYP---RIGKAYLDGSNWQTVV 2208
Query: 311 SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 370
S + L ++ ML T ++W D + +I++I +G NR I S P
Sbjct: 2209 SSGISNPRDLTID--ML-------THDVYWVD-SKLDQIQKISYNGGNRQLIRSN---LP 2255
Query: 371 NGLTLDIATRRVYFADSKLDFI 392
N + + I T VY+ D L +
Sbjct: 2256 NVMGIAIHTSSVYWVDRNLQTV 2277
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 20/128 (15%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA--LALDLENGMLYYSTLKCTRWL 338
KLY D G K+ +DG ++++ L LALD G+++ +
Sbjct: 454 KLYVADALGQ----KVDVFELDGRWHAVVLGSNLTSPADLALDPTLGLMFVA-------- 501
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
++ +I R MDG+N I+S Y +G+ +D RR+++ DS LD+I+ +YD
Sbjct: 502 ------DSSQIVRANMDGTNVKAIVSEATYKASGIAVDTIARRIFWCDSLLDYIETVDYD 555
Query: 399 GTGRQQVI 406
G R V+
Sbjct: 556 GNYRFLVL 563
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 14/89 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALC---------- 53
RCV T CD + DC +G+DEG C C + C T H P +C
Sbjct: 1093 RCVPNTWKCDSENDCGDGSDEGSHCADKTCAYFQFTCPRTGHCIPASWVCDGDDDCFDKQ 1152
Query: 54 ---TCPPGEILSNDSVTCQDMNECEQPGY 79
CPP L++ C D+ +C Q Y
Sbjct: 1153 DEADCPPVACLAS-QFKCADLKQCVQEAY 1180
>gi|321476336|gb|EFX87297.1| hypothetical protein DAPPUDRAFT_43397 [Daphnia pulex]
Length = 4507
Score = 343 bits (881), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 167/301 (55%), Positives = 213/301 (70%), Gaps = 38/301 (12%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V DRC+N+T+VCDGK DCP+G+DEGPGCD +C+ CSN C TP G LC CPPGE+
Sbjct: 1199 VTDRCINVTQVCDGKRDCPSGSDEGPGCDTKDCEDHGASCSNGCMQTPAGPLCLCPPGEV 1258
Query: 61 L-SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI 119
L +ND+ C D++EC+ PG CSQ C NTK ++ICSC+EGY+LE D HTCKAIN S+AFL+
Sbjct: 1259 LLANDTKACVDLDECQFPGSCSQSCRNTKATFICSCSEGYLLEEDKHTCKAINSSSAFLL 1318
Query: 120 ISNRHSILVADLEEKG-------------------------KDHRAQDI----------- 143
ISNR S+LV+DL+EK D + + I
Sbjct: 1319 ISNRRSLLVSDLKEKSIEVVPVEVENVVALASDTHSNVLYWYDMKTKKIFRKELSGTPKV 1378
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ SG DL+EGLA DWI ++YW+DSRLN IEV ENG+NR+VL +I QPRG+ LDPS
Sbjct: 1379 IISSGADLIEGLALDWIAQNLYWVDSRLNTIEVSRENGSNRMVLLSKDIDQPRGIALDPS 1438
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
P R LFWTDWG++PRIER+ MDGSNR++I+++KI+WPNGLTLD+ T+RVYFADSK+D+I
Sbjct: 1439 PDARVLFWTDWGDHPRIERVNMDGSNRTSILTSKIFWPNGLTLDLPTKRVYFADSKVDYI 1498
Query: 263 D 263
D
Sbjct: 1499 D 1499
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 152/305 (49%), Gaps = 46/305 (15%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEI 60
+ +C++ + VC+ +DCP+ +DE C + EC K + C C P+ C C PG
Sbjct: 2990 SSQCIDESLVCNKVSDCPDDSDESHLCGVNECLKVEVHQCGQLCIDAPIKYKCACNPGYR 3049
Query: 61 LSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYV-LEYDNHTCKAINHSAAFL 118
L D C D++EC + PG CSQ C N+ GSY C CNE Y E D HTCK + +L
Sbjct: 3050 LMADGKACTDVDECTDTPGVCSQYCVNSPGSYYCKCNETYYEREADEHTCKRKDSITPWL 3109
Query: 119 IISNRHSILVADLEEKGKDHRAQD---IVVSGLDL------------------------- 150
+ +N+ + ++ K QD +V D
Sbjct: 3110 VFTNKFYVRNMSIDAKQYAVVHQDLRNVVAVDFDFREDRLYFADVNAKTIYRAFVNGTST 3169
Query: 151 -----------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+EGLA DW+G +YWLD +EV + +GT+R L D I+ PR +++
Sbjct: 3170 KETIIKHDSMGLEGLAVDWVGRKLYWLDRHSKHVEVSELDGTHRKTLKADGISDPRAIVV 3229
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADS 257
P G +LF+T W I R+GMDGSN + I++ ++ WPN LT+D T ++Y+AD+
Sbjct: 3230 HPGAG--YLFFTTWHLQAYIGRLGMDGSNFTRIVTYEQRLAWPNALTIDYMTDKLYWADA 3287
Query: 258 KLDFI 262
LD+I
Sbjct: 3288 HLDYI 3292
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 172/431 (39%), Gaps = 89/431 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+CV TK+CDG DC + ADE C C G C++ C P+P G +C C G++LS
Sbjct: 131 KCVERTKLCDGHGDCSDLADEKVECSNHLCT-SIG-CAHQCRPSPEGGICICAEGQVLST 188
Query: 64 -DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D+ TC D +EC++ G+C Q CTN + S+ CSC +GY L D + C A N S L ++
Sbjct: 189 TDNRTCSDRDECKEWGFCDQTCTNVERSFECSCQDGYEL-IDGNQCAASNASQFRLYFAH 247
Query: 123 RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
++ D + + + GLD Y + G + W D +I + +
Sbjct: 248 HQRVVKIDATGQSIETVSNSTSAGGLD------YHFRRGMLLWSDLETRKIYSAPLDSS- 300
Query: 183 RIVLAKDNITQPRG------------MMLDPSPGTRWL---FWTDW---------GENPR 218
L +D G D S T WL DW +
Sbjct: 301 ---LGQDKPPSTTGGGGASSRESRSSSSSDISVPTAWLPVAIAVDWIGDKLFVADALGQK 357
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
I+ +DG + +IS + P L LD T+ V F S I
Sbjct: 358 IDVFELDGRWHAIVISNNMSEPTDLALD-PTQGVMFVSEN-----------------SRI 399
Query: 279 FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA--LALDLENGMLYYSTLKCTR 336
FR ANMDGS LV+ +Y+A LA+DL T+
Sbjct: 400 FR------------------ANMDGSKMKDLVTDAIYKASGLAVDLP-----------TK 430
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD-SKLDFIDFC 395
+FW D + IE + DG NR ++ P L + R V++ D +K +
Sbjct: 431 RIFWCDSLLD-YIETVDYDGKNRFLVVRGAANVPAASRLAVFERSVFWTDGTKQGVLSVS 489
Query: 396 NYDGTGRQQVI 406
+ G Q I
Sbjct: 490 KFKGESTIQTI 500
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 179/463 (38%), Gaps = 83/463 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCP-----PG 58
RC+ ++CDG DC +G+DE + LC+ P TC P
Sbjct: 3805 RCILRWQICDGHNDCEDGSDE----------NNVTLCAKRPKPCNPNEQFTCANRNCVPK 3854
Query: 59 EILSN---------DSVTCQDMNECEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDN- 105
E++ N D C + C G C C N T G YICSCN GY+ +N
Sbjct: 3855 ELVCNLQNDCEDESDERGCHSASSCTDSSNGGCEHRCQNLTGGGYICSCNRGYIASKENP 3914
Query: 106 HTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYW 165
C+ ++ A +H+ + KG +D V G+ ++ +
Sbjct: 3915 KICEDVDECATL-----QHNCSQICINLKGSYKCGCHSGFDSVDNVSGVCKSPGPWNLLF 3969
Query: 166 LDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD 225
D N I + R V+ + R LD P + +FWTD MD
Sbjct: 3970 SDGS-NVISLNTTQRKEREVI----FGEKRIQSLDFDPHSHIVFWTD----------PMD 4014
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
S + + I + ++I +V + +K + +++ + + LYW+
Sbjct: 4015 LSIKRSYIPE-----SSNQVEIGHPQVIVSFTKT--------AVPVDLSVDWVAQNLYWL 4061
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
+ G ++ A DG +V +D ++ L L+WT G
Sbjct: 4062 EMDGQTSKGQVVTAKNDGRYRRSVV------PRGIDTPTSIVVNPILG---ELYWTQAGS 4112
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT-RRVYFADSKLDFIDFCNYDGTGRQQ 404
NPRIE MDG+ R ++S ++ P +T+D + +++AD L I+ DGTGR
Sbjct: 4113 NPRIEMSWMDGTKRKVLVSERLAHPTAITIDFSMDNTIFWADHTLSTIEMMKRDGTGRTT 4172
Query: 405 VILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
V L GDN +LD+ LY+ + G L+
Sbjct: 4173 V------------LRGDNIDRPSSLDVFESTLYWISTGKGELR 4203
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 183/463 (39%), Gaps = 104/463 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNT---CHPTPLGA--------- 51
RC++ CD DC +G+DEGP EC K+ CS T C A
Sbjct: 2900 RCIHRNWTCDHDNDCGDGSDEGP-----ECNGKYRTCSPTEFACQNAKCVAKSYHCDKEN 2954
Query: 52 ----------------------LCTCPPGEILSNDSVTCQDMN-ECEQPGYCSQMCTNTK 88
+ TCP G+ +S C D + C + C ++
Sbjct: 2955 DCGDWSDEWNCTYSGGKSGSTPVATCPDGQFKCANSSQCIDESLVCNKVSDCPD---DSD 3011
Query: 89 GSYICSCNEGYVLEYDNHTCK--AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVS 146
S++C NE L+ + H C I+ + N L+AD GK D
Sbjct: 3012 ESHLCGVNE--CLKVEVHQCGQLCIDAPIKYKCACNPGYRLMAD----GKACTDVDECTD 3065
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTR 206
+ + G + + E DE+ R KD+IT
Sbjct: 3066 TPGVCSQYCVNSPGSYYCKCNETYYEREA-DEHTCKR----KDSITP------------- 3107
Query: 207 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD-----F 261
WL +T+ + + +D + + ++ + + D R+YFAD F
Sbjct: 3108 WLVFTN---KFYVRNMSID-AKQYAVVHQDLRNVVAVDFDFREDRLYFADVNAKTIYRAF 3163
Query: 262 IDCKSLEIKTNVNYST----------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
++ S + +T + + + + RKLYW+D V + + +DG++ L +
Sbjct: 3164 VNGTSTK-ETIIKHDSMGLEGLAVDWVGRKLYWLDRHSKHVEV----SELDGTHRKTLKA 3218
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS--TKIYW 369
+ + A+ + G Y LF+T W I R+GMDGSN + I++ ++ W
Sbjct: 3219 DGISDPRAIVVHPGAGY---------LFFTTWHLQAYIGRLGMDGSNFTRIVTYEQRLAW 3269
Query: 370 PNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
PN LT+D T ++Y+AD+ LD+I + + DG R+ V+ L V
Sbjct: 3270 PNALTIDYMTDKLYWADAHLDYIAYSDLDGRNRRYVVQDTLKV 3312
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 42/194 (21%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ SG EG+AYDW IYW DS + I + +GT + +A+ + +PR ++L P
Sbjct: 2345 LIKSGPINPEGIAYDWTHKKIYWTDSANSSIYAMNLDGTQVVNIAR--VDRPRAIVLHPC 2402
Query: 203 PGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G ++F+TDWG N +I R M G+ + IIS + P+GL +D Y D
Sbjct: 2403 RG--YMFFTDWGRFGPNGKIFRATMAGTMKEAIISQDLTQPSGLAID------YDDD--- 2451
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
LYW D V KI ++N+DG+N +L++ +Y A
Sbjct: 2452 ---------------------MLYWTD----AVREKIERSNLDGTNREVLITATIY-PFA 2485
Query: 320 LDLENGMLYYSTLK 333
+ + +Y++ L+
Sbjct: 2486 ITVFGNFIYWTDLQ 2499
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 75/129 (58%), Gaps = 4/129 (3%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMML 199
++++ S + VEGLA DW ++Y++DSR + V + N T R L +D + +PR +++
Sbjct: 643 ENVLASQNEGVEGLALDWASKNLYYIDSRKGTLNVLNTRNSTYRRTLLRD-LKRPRAIVV 701
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P+ G ++F+++W I R +DG++ + + WPNGL +D T R+Y+ D+ L
Sbjct: 702 HPNKG--FIFYSEWDRPANISRAYLDGTHLMVFKNILLGWPNGLAIDFETDRLYWCDALL 759
Query: 260 DFIDCKSLE 268
D I L+
Sbjct: 760 DHIQHSKLD 768
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 131/315 (41%), Gaps = 64/315 (20%)
Query: 91 YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----LVADLEEKGKDHRAQDIVVS 146
Y C C GY L T + I + +LI+ I L + + + R +V
Sbjct: 1599 YTCRCRPGYRLNPLGTTGQCIEEESPYLILMKGSQIIDLGLTPNSDSDSRGGRLTPVVEV 1658
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT-NRIVLAKDNITQPRGMMLDPSPGT 205
G L +D G +YW++ +E +ENGT ++ L N T + G
Sbjct: 1659 GAG--RELDFDRKGEAMYWIEV----LEGDEENGTLYKMNLGGGNKTSFLSDLDTGIVGA 1712
Query: 206 RWLFWTDW-GEN--------PRIERIGMDGS--NRSTIISTKIYWPNGLTLDIATRRVYF 254
+ DW G N IE I +DG +R+ I+S +G + +A R
Sbjct: 1713 PYTLAFDWVGRNLYLGNKKASNIEAIRVDGKTKHRTVILSN-----DGTDVSVAKPRAIA 1767
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS--G 312
D KLYW+DEGG G+P KI KANMDG+ L + G
Sbjct: 1768 LDP--------------------YEGKLYWLDEGGFGIPRKISKANMDGTEVRNLFTDIG 1807
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
Q +L +DL N LY+ST+ IE ++G+NR IIS+ I P
Sbjct: 1808 QPL-SLTIDLANKQLYWSTIN------------EAEIEASDVEGNNRRKIISSGINKP-- 1852
Query: 373 LTLDIATRRVYFADS 387
++L + R+Y+ D+
Sbjct: 1853 VSLAVFESRMYYLDT 1867
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 71/124 (57%), Gaps = 6/124 (4%)
Query: 143 IVVSGL--DLVEGLAYDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
+V SG+ + + GLA DW+ G++Y+ + IEV +G+ R+ L + PR +
Sbjct: 2021 VVSSGIGSNGIRGLAVDWLAGNLYFTNVFPHETYIEVAWLDGSKRMELLRSTKESPRELA 2080
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
++P R+L+W D G+ P I + +DGS + ++++ I P LT+D+ T VY+ DS+
Sbjct: 2081 VNPI--KRFLYWIDNGQFPVIGKALLDGSQWTPLVTSGISSPRDLTVDMQTHDVYWVDSR 2138
Query: 259 LDFI 262
D I
Sbjct: 2139 EDAI 2142
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 120/332 (36%), Gaps = 103/332 (31%)
Query: 78 GYCSQMCTNTKGS------YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---LV 128
G C MC ++ + + C+CN GY L D C + FL+ S + I ++
Sbjct: 533 GGCQHMCIVSQRADGQGLGFRCACNIGYRLADDRMWCSPVED---FLMYSQQKFIKGRVI 589
Query: 129 ADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK 188
+ E D A +VS GL +D HIY+ D
Sbjct: 590 LPVSEGFDD--AISPIVSRTARFVGLDFDSYDDHIYYSD--------------------- 626
Query: 189 DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248
++LD I RI +G+ R +++++ GL LD A
Sbjct: 627 --------VILD-----------------VIYRIRRNGTGRENVLASQNEGVEGLALDWA 661
Query: 249 TRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
++ +Y+ DS+ ++ L + + T+ R L
Sbjct: 662 SKNLYYIDSRKGTLN--VLNTRNSTYRRTLLRDL-------------------------- 693
Query: 309 LVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY 368
+ A+ + G ++YS +W I R +DG++ + +
Sbjct: 694 ----KRPRAIVVHPNKGFIFYS-----------EWDRPANISRAYLDGTHLMVFKNILLG 738
Query: 369 WPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
WPNGL +D T R+Y+ D+ LD I DGT
Sbjct: 739 WPNGLAIDFETDRLYWCDALLDHIQHSKLDGT 770
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+ Y +K+YW D + I N+DG+ Q+ +D ++ +
Sbjct: 2356 IAYDWTHKKIYWTDSANS----SIYAMNLDGT--------QVVNIARVDRPRAIVLH--- 2400
Query: 333 KCTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
C ++F+TDWG N +I R M G+ + IIS + P+GL +D +Y+ D+
Sbjct: 2401 PCRGYMFFTDWGRFGPNGKIFRATMAGTMKEAIISQDLTQPSGLAIDYDDDMLYWTDAVR 2460
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+ I+ N DGT R +V++ + F + G+
Sbjct: 2461 EKIERSNLDGTNR-EVLITATIYPFAITVFGN 2491
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 95/198 (47%), Gaps = 35/198 (17%)
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNR---IVLAKD----NITQPRGMMLDPSPGTR 206
LA+DW+G ++Y + + + IE +G + ++L+ D ++ +PR + LDP G
Sbjct: 1716 LAFDWVGRNLYLGNKKASNIEAIRVDGKTKHRTVILSNDGTDVSVAKPRAIALDPYEGK- 1774
Query: 207 WLFWTD---WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
L+W D +G +I + MDG+ + T I P LT+D+A +++Y++ I+
Sbjct: 1775 -LYWLDEGGFGIPRKISKANMDGTEVRNLF-TDIGQPLSLTIDLANKQLYWSTINEAEIE 1832
Query: 264 CKSLE-----------IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM-DGSNASILVS 311
+E I V+ + ++Y++D V ++ + ++ +G N IL +
Sbjct: 1833 ASDVEGNNRRKIISSGINKPVSLAVFESRMYYLDT----VYEEVARVDLPNGDNKQILKN 1888
Query: 312 GQLYEALALDLENGMLYY 329
Q DL+ LY+
Sbjct: 1889 NQ------PDLKTFRLYH 1900
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 34/181 (18%)
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRK----- 281
++ +T+I + P G+ D +++Y+ DS I +L+ VN + + R
Sbjct: 2340 ASNATLIKSGPINPEGIAYDWTHKKIYWTDSANSSIYAMNLDGTQVVNIARVDRPRAIVL 2399
Query: 282 ------LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLK 333
+++ D G G KI +A M G+ ++S L + LA+D ++ MLY
Sbjct: 2400 HPCRGYMFFTDWGRFGPNGKIFRATMAGTMKEAIISQDLTQPSGLAIDYDDDMLY----- 2454
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL--------DIATRRVYFA 385
WTD +IER +DG+NR +I+ IY P +T+ D+ R +Y A
Sbjct: 2455 ------WTD-AVREKIERSNLDGTNREVLITATIY-PFAITVFGNFIYWTDLQLRGLYRA 2506
Query: 386 D 386
+
Sbjct: 2507 E 2507
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 45/213 (21%)
Query: 197 MMLDPSPGTRWLFWTDWGENP--RIERIGMDGSNRSTIISTKI--YWPNGLTLDIATRRV 252
+ +D W++W ++ ++ I RI +GS + ++S+ I GL +D +
Sbjct: 1984 LHVDVHCADNWIYWVEFNKDKLNGIFRIRPNGSELTHVVSSGIGSNGIRGLAVDWLAGNL 2043
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
YF TNV + ++ W +DGS L+
Sbjct: 2044 YF----------------TNVFPHETYIEVAW----------------LDGSKRMELLRS 2071
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
L + R+L+W D G+ P I + +DGS + ++++ I P
Sbjct: 2072 TKESPRELAVN---------PIKRFLYWIDNGQFPVIGKALLDGSQWTPLVTSGISSPRD 2122
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
LT+D+ T VY+ DS+ D I +Y G RQ +
Sbjct: 2123 LTVDMQTHDVYWVDSREDAIQRISYTGGNRQLI 2155
>gi|241287401|ref|XP_002407037.1| low density lipid receptor-related protein, putative [Ixodes
scapularis]
gi|215496981|gb|EEC06621.1| low density lipid receptor-related protein, putative [Ixodes
scapularis]
Length = 4124
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 178/379 (46%), Positives = 229/379 (60%), Gaps = 60/379 (15%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V +RCVN++ +CDGK+DCPNGADEGPGC CK C++ CH TP+G LC CP GE+
Sbjct: 1101 VTERCVNISSICDGKSDCPNGADEGPGCASTPCKENKAGCTHDCHVTPMGPLCVCPKGEV 1160
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
L NDS TC D+NEC G CSQ CTN+KGS+ C+C +GY LE H CKA N S AFL+I
Sbjct: 1161 L-NDSTTCVDLNECNIAGSCSQHCTNSKGSFTCACEDGYQLEL-KHKCKATNRSEAFLVI 1218
Query: 121 SNRHSILVADLE---------------------------------------EKGKDHRAQ 141
SNR SILVA+L+ KG D Q
Sbjct: 1219 SNRRSILVANLDTSFLERVPVKVENVVATASDMASNTIYWSDMSVKKVFRLTKGGD--PQ 1276
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ SGLDLVEGLA DW+ ++YW+DSRL IEV +G N IVL K+NI+QPRG+ LDP
Sbjct: 1277 VVISSGLDLVEGLAVDWVARNLYWVDSRLKTIEVSTLDGRNHIVLLKENISQPRGLSLDP 1336
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G R +FWTDWGENPR+E +G+DG+ R TI+ TKIYWPNGLTLD+ +R+YFADSKLD+
Sbjct: 1337 REGVRLMFWTDWGENPRVESVGLDGTMRKTIVHTKIYWPNGLTLDLPNKRIYFADSKLDY 1396
Query: 262 ID------CKSLEIKTNVNY------STIFR-KLYWIDEGGNGVPLKIGKANMDGSNASI 308
ID ++ + +Y TIF LYW D N V + G+N ++
Sbjct: 1397 IDFCNYDGSGRQQVLAHNHYLLHPHSLTIFEDTLYWTDRQLNRV---LSCQKFRGTNQTV 1453
Query: 309 LVSGQLYEALALDLENGML 327
VS + + L + + + +L
Sbjct: 1454 -VSHLVSQPLGIHVNHPVL 1471
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 173/384 (45%), Gaps = 91/384 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ +VC+ + DC +G+DE C++ EC K + C + C T C C G L
Sbjct: 2604 QCIPYERVCNKQQDCSDGSDEPTHCNVDECAKVEMNQCEHKCVNTLTSFYCECNEGYELL 2663
Query: 63 NDSVTCQDMNECE-QPGYCSQMCTNTKGSYICSCNEGYV-LEYDNHTCKAINHSAAFLII 120
D C D NEC +P CSQ C NT GSY C C++ Y E D HTCK + +LI
Sbjct: 2664 KDGKACADRNECRVKPSVCSQYCINTPGSYFCKCSQTYYDRELDGHTCKRKDDVTPWLIF 2723
Query: 121 SNRH--------------------------------SILVADLEEKGKDH------RAQD 142
SNR+ I AD+ K Q
Sbjct: 2724 SNRYYLRNTSLDGTQYNLVKMNLRNVVAIDFDIREQRIYFADVGNKTIQRIFTNGTGEQV 2783
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V + +EGLA DWIG +YWLD ++ V + +GT+R + I+ PR + +
Sbjct: 2784 LVRHDVHGLEGLAVDWIGRKMYWLDRTSKQMYVAELDGTSRKTVLPKGISDPRAIAV--H 2841
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSKLD 260
PG +LF+TDWG + I R+G+DGSN + I+ K+ WPN LT+D + ++++AD+ LD
Sbjct: 2842 PGIGYLFFTDWGHHAFIGRMGLDGSNFTRIVLYENKLVWPNALTIDYFSDKLFWADAHLD 2901
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ-LYEALA 319
+I+ +++DGSN ++ G+ + A
Sbjct: 2902 YIE----------------------------------FSDLDGSNRHTVLQGRSVPHVFA 2927
Query: 320 LDLENGMLYYSTLKCTRWLFWTDW 343
L + + WLFWTDW
Sbjct: 2928 LSVFDD-----------WLFWTDW 2940
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 168/340 (49%), Gaps = 60/340 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EILS 62
+C++ +K+CDGK DC +GADE C C+ C C + G C C PG I +
Sbjct: 55 KCIDKSKLCDGKQDCDDGADEKKNCSSNLCRTL--SCEYGCRASLDGGDCFCAPGMTINT 112
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D+NEC + GYC Q+CTN+ GS+ C C GY L+ H CKA N S+ L+ +
Sbjct: 113 KDKRTCVDLNECSEWGYCDQLCTNSPGSFQCLCVRGYTLDPPRH-CKADNSSSMRLLFTR 171
Query: 123 RHSILV-----ADL------------------------EEKGKDHRAQDIVVSGLDLVE- 152
++I ADL + + K RA+ ++ + +
Sbjct: 172 HNAIYSVSADGADLSILANASSASGLDYHYERNTVYWTDTETKQVRAKPMLAASRPPISV 231
Query: 153 -------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+A DW+G +Y D+ +I++ + +G ++ N++ P+ + LDP+ G
Sbjct: 232 VFTWNPVSMAVDWVGNKLYVCDTLGQKIDLLEMDGLRHAIVLSRNLSNPQDIALDPTVG- 290
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI--- 262
++F++D I+R MDGS+RST++ T IY GLT+D T+ + + DS+LD I
Sbjct: 291 -YMFFSD---GDHIDRAHMDGSHRSTVV-TAIYKATGLTVDYVTKFLVWCDSQLDQIVAV 345
Query: 263 ----DCKSLEIKTNV-----NYSTIFR-KLYWIDEGGNGV 292
+++ I+ + N T+F K+YW D GV
Sbjct: 346 DYTGSNRNIIIRGSTRVPSPNKITLFEDKVYWTDGTRQGV 385
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 190/446 (42%), Gaps = 106/446 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGA----LCTCPPG 58
+CV VC+ + DC + +DE GC C G C + C T LG +CTC G
Sbjct: 3456 KCVPRMDVCNHEDDCGDLSDER-GCHEGTCDATSRGNCEHNC--TTLGDANGYICTCANG 3512
Query: 59 -EILSNDSVTCQDMNECEQPGY-CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAA 116
+I +D C+D+NEC G+ CSQ+C N G Y C C +GY + + +H C A A
Sbjct: 3513 YKIKEDDPKRCEDINECATFGHNCSQICENLMGDYGCRCRDGYEM-FKSH-CHA-KGPAP 3569
Query: 117 FLIISNRHSILVADLEEKGK---------------DHR---------------------- 139
++ +N + + D++ + + D R
Sbjct: 3570 IILYTNGPDVRMLDMKNEIQSSVITGESRVQSLDFDPRENVLYWTDSYEKTIKRAFLPNL 3629
Query: 140 ---------AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN------RIEVCDENGTNRI 184
Q++ + GL+ +A DW+G IYW+D+ L+ RI V +G R
Sbjct: 3630 TDVSSGIGFPQNLELKGLNKPNAIAVDWVGRTIYWMDTDLSNTRPKGRILVSLIDGRYRR 3689
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L N+ +P M +DP G W+FW+D G NP+IE MDGS R I+ K+ +P GLT
Sbjct: 3690 TLLSTNLERPTSMAVDPEMG--WMFWSDAGSNPKIETAWMDGSKRRIIVGDKVGYPTGLT 3747
Query: 245 LDIAT-RRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
+D A+ RVY+ DSKL+ I+ + DG
Sbjct: 3748 IDYASDHRVYWCDSKLNTIE----------------------------------TSKQDG 3773
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
SN +L SG+L A+DL +++ T G ++ R+ + N + +
Sbjct: 3774 SNRVVLASGELLHPFAMDLFEDSIFWVTRDSGEIFRQDKHGRGVKV-RVKRNVENPTGV- 3831
Query: 364 STKIYWPNGLTLDIATRRVYFADSKL 389
KI+ P L + R A S L
Sbjct: 3832 --KIFQPLKYNLTVLNRCPSSACSHL 3855
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 73/124 (58%), Gaps = 10/124 (8%)
Query: 147 GLDLVEGLAYDWIGGH------IYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
G + + G+A DW+ G IY+ + +EVC+ +G+NR++L K PR +
Sbjct: 1908 GSNGIRGVAVDWVAGKKNPIKIIYFTNVFPHETYMEVCELDGSNRVILLKTTTDSPREIA 1967
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
++P R+L+W D+G+ P+IE+ +DG+NR I+ T I P LT+DI T VY+ DS+
Sbjct: 1968 VNPI--KRYLYWIDYGQYPKIEKAYLDGTNRVPIVVTGISNPRDLTIDIVTHDVYWVDSR 2025
Query: 259 LDFI 262
D +
Sbjct: 2026 EDAV 2029
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 155/389 (39%), Gaps = 122/389 (31%)
Query: 78 GYCSQMCTNTKGS-------YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH------ 124
G C MC T+GS Y C C+ G+ L + C + + FL+ S +
Sbjct: 433 GGCQHMCIVTRGSGGFGLLGYRCVCHTGFELAPNGKDCSRV---STFLLYSQQKFVRGSL 489
Query: 125 -------------SILVADLEEKGKDHRAQD-------------------------IVVS 146
I+ G D A+D ++ S
Sbjct: 490 MNITHEGFTDAMVPIVSKSARFVGLDFDARDNFIYYSDVILDVIYRVTIDGSGKENVLAS 549
Query: 147 GLDLVEGLAYDWIGGHIYWLDSR---LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ VEGLA DW+ ++Y++DSR LN I V +N R L K N+ +PR +++ P+
Sbjct: 550 QNEGVEGLALDWVSHNLYYIDSRKGTLNVISV--KNFQYRRTLLK-NLKRPRAIVVHPNK 606
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G ++F+++W I R +DG+N + WPNGL++D T R+Y+ D+ LD I
Sbjct: 607 G--YVFYSEWDRPANISRAYLDGTNVMVFRGVLLGWPNGLSIDFQTDRLYWCDALLDHIQ 664
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
AN+DG++ + S ++ +L +
Sbjct: 665 ----------------------------------HANLDGTDVQTINSPRIKHPFSLVIH 690
Query: 324 NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR--- 380
WLF TDW R++ I M +++T KI T++ +R
Sbjct: 691 GD-----------WLFVTDW----RLDAILM--MHKTTGADEKIV----TTVEEGSRLYG 729
Query: 381 -RVYFADS-KLDFIDFCNYDGTGRQQVIL 407
+VY ++ K+D C ++ G Q++
Sbjct: 730 IKVYSRENQKVDSRHPCQFNNGGCQKLCF 758
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 150/375 (40%), Gaps = 59/375 (15%)
Query: 47 TPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMC---TNTKGSYICSCNEGYVLEY 103
T + L + P G +++ + Q N C CS +C + Y C C GY +
Sbjct: 1452 TVVSHLVSQPLGIHVNHPVLQPQSSNPCSS-APCSHLCLLSPSRPSQYSCRCPPGYTQDR 1510
Query: 104 DNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHI 163
+ I FL++ + ++ L K Q + V G++ YD G I
Sbjct: 1511 ASAGGSCIPVDTPFLMLMKANQLIDMSLSPDEKS-AGQIVPVIGIENGYDFDYDKQEGII 1569
Query: 164 YWLDSRLNRIEVCDENGTNRIV-LAKDNITQPRGMMLDPSPGTRWLFWTDW-GEN----- 216
YW+ +L+ + ENGT V L N+T+ ++D G + DW G N
Sbjct: 1570 YWV--QLSEDD--KENGTIYTVSLKGGNVTK---FLVDSIIGAPYALAFDWVGRNLYIGN 1622
Query: 217 ---PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
IE + +DG + I + +G + + D +
Sbjct: 1623 RKASNIEIVKVDGERKFRRI---LLTNDGSEKGVGKPKAMVVDPEQG------------- 1666
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDLENGMLYYST 331
KL+W+DEGG GVP K+ + +MDG N ILV L EAL +DL +Y
Sbjct: 1667 -------KLFWLDEGGIGVPRKLARVSMDGKNPIILVKENLRRLEALTIDLTGKRIY--- 1716
Query: 332 LKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
W+ E IE + +DG+ R T++ + + L + + ++Y+ DS +
Sbjct: 1717 --------WSQSFEG-IIESVDLDGNGRKTLVPSTLGLAKPQGLTVFSNKLYYLDSVHEK 1767
Query: 392 IDFCNYDGTGRQQVI 406
I + G Q V+
Sbjct: 1768 IARVDLPDGGNQVVL 1782
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 35/211 (16%)
Query: 197 MMLDPSPGTRWLFWTDWGENPR--IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
+ LD ++W ++ + R I RI DG++ +I+ I NG+ R V
Sbjct: 1865 LHLDVHVAMNHIYWIEFNQGERNGIYRIKPDGTDLKRVIADGI-GSNGI------RGV-- 1915
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
+D++ K IK + ++ +F +++ +DGSN IL+
Sbjct: 1916 ---AVDWVAGKKNPIKI-IYFTNVFPHETYME-----------VCELDGSNRVILLKTTT 1960
Query: 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
+ + R+L+W D+G+ P+IE+ +DG+NR I+ T I P LT
Sbjct: 1961 DSPREIAVN---------PIKRYLYWIDYGQYPKIEKAYLDGTNRVPIVVTGISNPRDLT 2011
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+DI T VY+ DS+ D + + G RQ V
Sbjct: 2012 IDIVTHDVYWVDSREDAVQKVAFSGGSRQYV 2042
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 101/240 (42%), Gaps = 40/240 (16%)
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
PR D S R LF + I + DG++ S + + +GL VY
Sbjct: 154 PRHCKADNSSSMRLLF----TRHNAIYSVSADGADLSILANASS--ASGLDYHYERNTVY 207
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIF-------------RKLYWIDEGGNGVPLKIGKAN 300
+ D++ + K + + S +F KLY D G KI
Sbjct: 208 WTDTETKQVRAKPMLAASRPPISVVFTWNPVSMAVDWVGNKLYVCDTLGQ----KIDLLE 263
Query: 301 MDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSN 358
MDG +I++S L + +ALD G +++S + I+R MDGS+
Sbjct: 264 MDGLRHAIVLSRNLSNPQDIALDPTVGYMFFS--------------DGDHIDRAHMDGSH 309
Query: 359 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
RST++ T IY GLT+D T+ + + DS+LD I +Y G+ R +I V N +
Sbjct: 310 RSTVV-TAIYKATGLTVDYVTKFLVWCDSQLDQIVAVDYTGSNRNIIIRGSTRVPSPNKI 368
>gi|427788305|gb|JAA59604.1| Putative megalin [Rhipicephalus pulchellus]
Length = 4586
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 179/377 (47%), Positives = 226/377 (59%), Gaps = 56/377 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V DRCVN++ VCDGK DCPNGADEGPGC CK C++ CH TP+G LCTCP GE+
Sbjct: 1300 VTDRCVNISSVCDGKPDCPNGADEGPGCASTPCKGNKAGCTHGCHVTPVGPLCTCPKGEV 1359
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
L ND+ TC D+NEC G CSQ CTN+KGS+ CSC GY LE H CKA N S AFL+I
Sbjct: 1360 L-NDTTTCVDLNECLIAGTCSQHCTNSKGSFTCSCEPGYTLEL-KHRCKATNRSDAFLVI 1417
Query: 121 SNRHSILVADLEEK-------------------------------------GKDHRAQDI 143
SNR SILVA+L+ K Q +
Sbjct: 1418 SNRRSILVANLDTSFLERVPVKVENVVATASDMATNTIYWSDMSVKKVFRLTKGGEPQVV 1477
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ SGLDLVEGLA DW+ ++YW+DSRL IEV +G N IVL K+NI+QPRG+ LDP
Sbjct: 1478 ISSGLDLVEGLAVDWVARNLYWVDSRLKTIEVSTLDGKNHIVLLKENISQPRGLSLDPRE 1537
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G R +FWTDWGENPR+E +G+DG+ R TI+ TKIYWPNGLTLD+ +R+YFADSKLD+ID
Sbjct: 1538 GVRLMFWTDWGENPRVESVGLDGTMRKTIVHTKIYWPNGLTLDLPNKRIYFADSKLDYID 1597
Query: 264 ------CKSLEIKTNVNY------STIFR-KLYWIDEGGNGVPLKIGKANMDGSNASILV 310
++ + +Y TIF LYW D N V + G+N ++ V
Sbjct: 1598 FCNYDGSGRQQVLAHNHYLLHPHSLTIFEDTLYWTDRQLNRV---LSCQKFRGTNQTV-V 1653
Query: 311 SGQLYEALALDLENGML 327
S + + L + + + +L
Sbjct: 1654 SHLVSQPLGIHVNHPVL 1670
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 169/344 (49%), Gaps = 57/344 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ +VC+ + DC +G+DE C++ EC K + C + C T C C G L
Sbjct: 3065 QCIPYERVCNKQQDCSDGSDEPAHCNVDECAKVELNQCEHKCVNTLTSFYCECNEGYELL 3124
Query: 63 NDSVTCQDMNECE-QPGYCSQMCTNTKGSYICSCNEGYV-LEYDNHTCKAINHSAAFLII 120
D C D+NEC+ +P CSQ C N+ GSY C CN+ Y E+D TCK + +LI
Sbjct: 3125 KDGKACADINECQVKPSVCSQYCVNSPGSYFCKCNQTYYDREFDGRTCKRKDDIVPWLIF 3184
Query: 121 SNRHSILVADLE---------------------EKGKDHRA-----------------QD 142
SNR+ + L+ +G+ + A Q
Sbjct: 3185 SNRYYLRNTSLDGSLYNLVKMNLRNVVAIDFDIREGRIYFADVGNKTIQRIYTNGSGEQV 3244
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V + +EGLA DWIG +YWLD ++ V + +GT+R + I+ PR + +
Sbjct: 3245 LVRHDVHGLEGLAVDWIGRKMYWLDRTSKQMYVSELDGTSRKTILPKGISDPRAVAV--H 3302
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSKLD 260
PG +LF+TDWG + I R+G+DG+N + I+ K+ WPN LT+D + ++++AD+ LD
Sbjct: 3303 PGIGYLFFTDWGHHAFIGRMGLDGTNFTRIVLYENKLVWPNALTIDYFSDKLFWADAHLD 3362
Query: 261 FIDCKSLEIKT-----------NVNYSTIFRK-LYWIDEGGNGV 292
+I+ L+ K +V T+F L+W D GV
Sbjct: 3363 YIEFSDLDGKNRHTVLQGRTVPHVFALTVFDDWLFWTDWNMKGV 3406
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 164/342 (47%), Gaps = 62/342 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EILS 62
+C++ +K+CDGK DC +GADE C + C+ C + C + G C CPPG I +
Sbjct: 252 KCIDKSKLCDGKQDCDDGADEKKNCSSSLCRTLS--CEHGCRASLEGGDCFCPPGMTINT 309
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D +C D+NEC + GYC Q+CTN+ GSY C C GY L+ H CKA N SA L+ +
Sbjct: 310 KDKRSCMDLNECSEWGYCDQLCTNSPGSYQCLCVRGYTLDPPRH-CKADNSSAMRLLFTR 368
Query: 123 RHSILVADLEEKGKDHRAQDIVVSGLDLVE------------------------------ 152
++I + A SGLD
Sbjct: 369 HNAIYSVSSDGADLSILANASSASGLDYHHDRKLLFWTDTETKQIHSMRLAGDKELRSPI 428
Query: 153 ---------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+A DW+G +Y DS +I++ + +G ++ N++ P+ + LDP+
Sbjct: 429 SVVFSWNPVSMAVDWVGNKLYVCDSLGQKIDLLELDGLRHAIVLSRNLSNPQDIALDPTV 488
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI- 262
G ++F++D I+R MDGS+R+TI+ T IY GLT+D T+ + + DS+LD I
Sbjct: 489 G--YMFFSD---GDHIDRAHMDGSHRTTIV-TAIYKATGLTVDYVTKFLVWCDSQLDQIV 542
Query: 263 ------DCKSLEIKTNV-----NYSTIFR-KLYWIDEGGNGV 292
+++ I+ + N T+F K+YW D GV
Sbjct: 543 AIDYTGSNRNIIIRGSTRVPSPNKITLFEDKVYWTDGTRQGV 584
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 187/437 (42%), Gaps = 106/437 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKF-GLCSNTCHPTPLGA----LCTCPPG 58
+C+ +VC+ K DC + +DE GC C G C + C T LG +CTC G
Sbjct: 3918 KCIPRVEVCNRKDDCGDLSDER-GCHEGTCDAATRGGCEHNC--TTLGDSNGYICTCASG 3974
Query: 59 -EILSNDSVTCQDMNECEQPGY-CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAA 116
+I +D C+D+NEC G+ CSQ+C N G Y C C EGY + + +H C A A
Sbjct: 3975 YKIKDDDPKRCEDINECATFGHNCSQICENLMGDYGCRCKEGYEM-FKSH-CHA-KGPAP 4031
Query: 117 FLIISNRHSILVADLEEKGKD-------------------------------HRA----- 140
++ +N I + DL+ + + RA
Sbjct: 4032 IVLYTNGPDIRMLDLKNEVQSAVITGESRVQALDYDPRDQMLYWTDSYEKTIKRAFLPNL 4091
Query: 141 ----------QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN------RIEVCDENGTNRI 184
Q++ + GL +A DW+G IYW+D+ L+ RI V +G R
Sbjct: 4092 TDVSAGIGFPQNLELKGLTKPNAIAVDWVGRTIYWMDADLSSTRPKGRIFVSLIDGRYRK 4151
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L N+ +P M +DP G W+FW+D G NP+IE MDGS R I+ KI +P GLT
Sbjct: 4152 TLLSSNLERPTSMAVDPDMG--WMFWSDSGSNPKIETAWMDGSKRRIIVGDKIGYPTGLT 4209
Query: 245 LDIAT-RRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
+D A+ R+Y+ DSKL+ I+ A DG
Sbjct: 4210 IDYASDHRIYWCDSKLNTIE----------------------------------TAKQDG 4235
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
SN +++SG L A+DL +++ T G ++ R+ + N + +
Sbjct: 4236 SNRVVIISGDLMHPFAMDLFEDSIFWMTRDSGEIYRQDKHGRGVKV-RVKRNVENPTGV- 4293
Query: 364 STKIYWPNGLTLDIATR 380
KI+ P L + R
Sbjct: 4294 --KIFQPLKYNLSVPNR 4308
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
Query: 147 GLDLVEGLAYDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
G + + G+A DW+ G IY+ + IEVC +G+NR++L K PR + ++P
Sbjct: 2120 GSNGIRGVAVDWVAGSIYFTNVFPHETYIEVCLLDGSNRVILLKTTTDSPREIAVNPV-- 2177
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
R+L+W D+G+ P+IE+ +DG+NR I+ T I P LT+DI T VY+ DS+ D +
Sbjct: 2178 KRFLYWIDYGQYPKIEKAYLDGTNRVPIVVTGISNPRDLTIDIVTHDVYWVDSREDAV 2235
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 123/275 (44%), Gaps = 68/275 (24%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSR---LNRIEVCDENGTNRIVLAKDNITQPRGM 197
++++ S + VEGLA DW+ ++Y++DSR LN I V +N R L K N+ +PR +
Sbjct: 743 ENVLASQNEGVEGLALDWVSHNLYYIDSRKGTLNVISV--KNFQYRRTLLK-NLKRPRAI 799
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++ P+ G ++F+++W I R +DGSN + WPNGL++D T R+Y+ D+
Sbjct: 800 VVHPNKG--YVFYSEWDRPANISRAYLDGSNVMVFRGVLLGWPNGLSIDFQTDRLYWCDA 857
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
LD I AN+DG++ + S ++
Sbjct: 858 LLDHIQ----------------------------------HANLDGTDVQTINSPRIKHP 883
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
+L + WLF TDW + ++ + G++ I T++
Sbjct: 884 FSLVIHGD-----------WLFVTDWRLDAILKMHKITGADEKIIT----------TVEE 922
Query: 378 ATR----RVYFADS-KLDFIDFCNYDGTGRQQVIL 407
+R +VY D+ K+D C ++ G Q++
Sbjct: 923 GSRLYGIKVYSRDNQKVDSRHPCQFNNGGCQKLCF 957
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 42/185 (22%)
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EG+A+DW IYW DS I + +GT +++A ++ +PR ++LDP G ++++T
Sbjct: 2436 EGIAFDWTAKKIYWTDSANRSIYAMNRDGTQLVMIA--HVERPRAIVLDPCQG--YMYYT 2491
Query: 212 DWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
DWG +I R M G+N+ I+ + P+GL LD
Sbjct: 2492 DWGRYGNTGKIYRATMAGNNKQAIVEQNLTQPSGLALDYDD------------------- 2532
Query: 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLY 328
+KLYW D + KI ++++DG+N LVS +Y A+ + +Y
Sbjct: 2533 -----------KKLYWTD----ALREKIERSDLDGNNRETLVSATIY-PFAITVYENYIY 2576
Query: 329 YSTLK 333
++ L+
Sbjct: 2577 WTDLQ 2581
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 148/345 (42%), Gaps = 59/345 (17%)
Query: 80 CSQMC---TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
CS +C + Y C C GY + + + + FL++ + ++ L K
Sbjct: 1683 CSHLCLLSPSRPTQYSCRCPPGYTQDRASASGSCVPVDTPFLMLMKANQLIDISLTPDDK 1742
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN----RIVLAKDNIT 192
Q + + G++ YD G+IYW I++ DE+ N + L N+T
Sbjct: 1743 S-SGQIVPIIGIENGYDFDYDKQEGNIYW-------IQLADEDKENGTIYTVSLKGGNVT 1794
Query: 193 QPRGMMLDPSPGTRWLFWTDW-GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
+ ++D G + DW G N I G+ +++ I +I +G + RR
Sbjct: 1795 K---FLMDGIIGAPYAIAFDWVGRNLYI------GNRKASNI--EIVKVDG---EKQYRR 1840
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
V + + K + + KL+W+D+GG GVP K+ + +MDG N ILV
Sbjct: 1841 VLLTNDGSE----KGIGKPKAIVLDPEQGKLFWLDDGGIGVPRKLARVSMDGKNPIILVK 1896
Query: 312 GQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST--KI 367
L EAL +DL +Y+S IE + +DG+ R T++S+ +
Sbjct: 1897 DNLRRLEALTIDLTGKRVYWSQ------------SYEGIIESVDLDGNGRKTLLSSVAGL 1944
Query: 368 YWPNGLTLDIATRRVYFADS---KLDFIDFCNYDGTGRQQVILID 409
P GLT + + ++Y+ DS K+ +D G QV+L D
Sbjct: 1945 AKPQGLT--VFSNKLYYLDSVHEKIARVDL----PDGGNQVVLED 1983
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 25/178 (14%)
Query: 242 GLTLDIATRRVYFA----DSKLDFIDCKSLEIKTNVN---------YSTIFRKLYWIDEG 288
GL D A +R+YF D + +++ ++I +N + +K+YW D
Sbjct: 2394 GLDFDYADKRMYFTQIRPDGSISWVNPDKMDIHVVLNKTINPEGIAFDWTAKKIYWTDSA 2453
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
I N DG+ ++ + A+ LD G +YY+ W +G +
Sbjct: 2454 NRS----IYAMNRDGTQLVMIAHVERPRAIVLDPCQGYMYYTD--------WGRYGNTGK 2501
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I R M G+N+ I+ + P+GL LD +++Y+ D+ + I+ + DG R+ ++
Sbjct: 2502 IYRATMAGNNKQAIVEQNLTQPSGLALDYDDKKLYWTDALREKIERSDLDGNNRETLV 2559
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
R+L+W D+G+ P+IE+ +DG+NR I+ T I P LT+DI T VY+ DS+ D +
Sbjct: 2179 RFLYWIDYGQYPKIEKAYLDGTNRVPIVVTGISNPRDLTIDIVTHDVYWVDSREDAVQKV 2238
Query: 396 NYDGTGRQQV 405
++ G RQ V
Sbjct: 2239 SFSGGNRQYV 2248
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 129/356 (36%), Gaps = 108/356 (30%)
Query: 78 GYCSQMCTNTKGS-------YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL--V 128
G C MC T+GS Y C C+ G+ L + C + + FL+ S + + +
Sbjct: 632 GGCQHMCIVTRGSGGFGLLGYRCVCHTGFELLSNRKDCTRV---STFLLYSQQKFVRGSL 688
Query: 129 ADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK 188
++ + G IV V GL +D IY+ D
Sbjct: 689 MNITQDGFTDAMVPIVSKSARFV-GLDFDARERFIYYSD--------------------- 726
Query: 189 DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248
++LD I R+ +DGS + +++++ GL LD
Sbjct: 727 --------VILD-----------------VIYRVTIDGSGKENVLASQNEGVEGLALDWV 761
Query: 249 TRRVYFADSK---LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305
+ +Y+ DS+ L+ I K+ + + T+ + L
Sbjct: 762 SHNLYYIDSRKGTLNVISVKNFQYR-----RTLLKNL----------------------- 793
Query: 306 ASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
+ A+ + G ++YS +W I R +DGSN
Sbjct: 794 -------KRPRAIVVHPNKGYVFYS-----------EWDRPANISRAYLDGSNVMVFRGV 835
Query: 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+ WPNGL++D T R+Y+ D+ LD I N DGT Q + + F+ + GD
Sbjct: 836 LLGWPNGLSIDFQTDRLYWCDALLDHIQHANLDGTDVQTINSPRIKHPFSLVIHGD 891
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 40/220 (18%)
Query: 193 QPRGMM-----LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
QPRG + LD + +++T + I + D + +++ I P G+ D
Sbjct: 2384 QPRGNLTNVVGLDFDYADKRMYFTQIRPDGSISWVNPDKMDIHVVLNKTIN-PEGIAFDW 2442
Query: 248 ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRK-----------LYWIDEGGNGVPLKI 296
+++Y+ DS I + + V + + R +Y+ D G G KI
Sbjct: 2443 TAKKIYWTDSANRSIYAMNRDGTQLVMIAHVERPRAIVLDPCQGYMYYTDWGRYGNTGKI 2502
Query: 297 GKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+A M G+N +V L + LALD ++ LY WTD +IER +
Sbjct: 2503 YRATMAGNNKQAIVEQNLTQPSGLALDYDDKKLY-----------WTD-ALREKIERSDL 2550
Query: 355 DGSNRSTIISTKIYWPNGLTL--------DIATRRVYFAD 386
DG+NR T++S IY P +T+ D+ R VY A+
Sbjct: 2551 DGNNRETLVSATIY-PFAITVYENYIYWTDLQLRGVYRAE 2589
>gi|391338536|ref|XP_003743614.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Metaseiulus occidentalis]
Length = 4584
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 147/302 (48%), Positives = 188/302 (62%), Gaps = 40/302 (13%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V DRC+N T VC+GK DCP+G DEGP CD +C + C++ C TP+G +CTC GE
Sbjct: 1302 VTDRCINNTLVCNGKFDCPDGLDEGPVCDSGKCDPEAVGCTHKCIQTPMGPVCTCRAGER 1361
Query: 61 LSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH-TCKAINHSAAFL 118
L N + TC D++EC E G CSQ C NTKGSY C C+ GY+ + NH CKA + S A+L
Sbjct: 1362 L-NSTTTCVDLDECTELVGACSQHCFNTKGSYTCKCDPGYLEDPANHHKCKAADRSQAYL 1420
Query: 119 IISNRHSILVADLEEKG-------------------------------------KDHRAQ 141
+ISNR SILV DL+ K
Sbjct: 1421 VISNRRSILVGDLDTSSLERLPVKVDNVVATASYMKNNTIYWFDMNAKKIFKLMKGKELT 1480
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ SGLDL+EGLA DWI ++YW+DS+L IEV + G N I+L NI+QPRG+ +DP
Sbjct: 1481 TVISSGLDLIEGLAVDWIASNLYWVDSKLKTIEVSNLEGKNHIILLNSNISQPRGLSIDP 1540
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
R +F++DWGENPRIE +G+DGS R TII T+I+WPNGLTLD+ T+RVYFADSKLD+
Sbjct: 1541 RKDARVMFFSDWGENPRIESVGLDGSMRRTIIDTRIFWPNGLTLDLPTKRVYFADSKLDY 1600
Query: 262 ID 263
ID
Sbjct: 1601 ID 1602
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 184/386 (47%), Gaps = 92/386 (23%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTCHPTPLGALCTCPPGEIL 61
DRC+ LTKVCD DC +G+DE P C++ EC + C + C TPL C C PG L
Sbjct: 3073 DRCIPLTKVCDKNRDCSDGSDESPRCNINECATPESNGCEHKCVDTPLSYRCECNPGYKL 3132
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNE-GYVLEYDNHTCKAIN-HSAAFL 118
D C D++EC E CSQ+C NT GS+ C CNE Y+ E D TCK + + ++
Sbjct: 3133 MPDGKACIDVDECTEMLSVCSQICVNTPGSFFCKCNETHYLREPDGKTCKRLETYPEPWI 3192
Query: 119 IISNRH--------------------SILVADLEEKGKD-----------HR------AQ 141
+ SNR+ +++ D + K HR +
Sbjct: 3193 VFSNRYYLRNASIDGTKYNLVKMDLKNVVAIDFDVKEDRLYYADVGNRTIHRMYTNGSGE 3252
Query: 142 DIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++V+ + +EG+A DW+ +YWLD ++ V NGT++ VL I+ PR + +
Sbjct: 3253 EVVIKYDVQGLEGMAVDWVSRKLYWLDRTSKQLFVSHLNGTSKKVLLPRGISDPRALAV- 3311
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK--IYWPNGLTLDIATRRVYFADSK 258
PG +LF+TDWG + I R+GMDGSN + +I+ + + WPN LT+D + ++++AD+
Sbjct: 3312 -HPGIGYLFFTDWGHHAFIGRLGMDGSNMTLLITYRKNLVWPNALTIDYFSDKIFWADAH 3370
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG-QLYEA 317
LD+I+ A+ +G N ++SG ++
Sbjct: 3371 LDYIE----------------------------------YADFEGKNRHTVLSGSKVPHV 3396
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDW 343
AL + + WLFWTDW
Sbjct: 3397 FALSVFDD-----------WLFWTDW 3411
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 111/345 (32%), Positives = 160/345 (46%), Gaps = 67/345 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EILSN 63
C++ TK+CDGK DC +GADE C C C C P+ G CTC G I
Sbjct: 254 CIDRTKICDGKEDCSDGADEKLNCTSTLCPSLS--CQQGCRPSLQGGECTCNLGMRINPE 311
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D +C D+NECE+ GYC Q+C N+ GSY CSC GY L +D CKAI+ S L+ + R
Sbjct: 312 DKRSCIDLNECEEWGYCDQLCQNSPGSYKCSCTAGYEL-HDKVGCKAIDSSEMRLVFA-R 369
Query: 124 HSIL--VADLEEKGKDHRAQDIVVSGLDLVEG---------------------------- 153
H+++ + L++ K+ V GLD G
Sbjct: 370 HAVIYELDPLDKSLKELSTIAGQVGGLDFHYGRRELYWTMLENRTIHSIRLGKDGVNERR 429
Query: 154 -------------LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+A DWI +Y DS +I+V + ++ N+T + + LD
Sbjct: 430 SPVIVPFAWNPVAIAIDWIANKLYVADSLGQKIDVMQFDNYRHSIILSRNLTNLQDIALD 489
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
+ G ++F++D IER MDGS+R I+S+ +Y NG+TLD V + DS+LD
Sbjct: 490 SALG--YMFFSD---GDHIERANMDGSDRKVIVSS-LYRANGITLDTVQNLVVWCDSQLD 543
Query: 261 FI-------DCKSLEIK-----TNVNYSTIFR-KLYWIDEGGNGV 292
I + K + IK + N T+F K++W D GV
Sbjct: 544 EIVAVNYAGELKHIIIKGSTKVPSANKLTLFENKIFWSDATKQGV 588
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 161/392 (41%), Gaps = 102/392 (26%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKF-GLCSNTCHPTPLGA------LCTCP 56
+C++ KVCD DC + +DE + + C G C + C T LGA +C CP
Sbjct: 3938 QCIDKNKVCDHNLDCDDESDELGCREYSRCSPPLNGGCQHNC--TSLGASSAHDYVCVCP 3995
Query: 57 PG-EILSNDSVTCQDMNECEQP-GYCSQMCTNTKGSYICSCNEGY--------------V 100
G I + ++ TC D++EC YC+ +C NT GSY C C G+ V
Sbjct: 3996 SGYRINATNTKTCADIDECASSLHYCAHICHNTVGSYGCECRPGFKRVNMDCHPPGDPPV 4055
Query: 101 LEYDNH-----TCKAINHSAAFLIISNRHSILVADLE----------------------- 132
+ Y N + S +IS +I D +
Sbjct: 4056 IMYTNGREVRLVISSPETSKQVALISGESNIFGVDFDPVQKFVYWVDVDAKTIKRAFIPD 4115
Query: 133 -----EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-------NRIEVCDENG 180
EK QD+ +S L + LA DW+G ++Y LD + R+ V +G
Sbjct: 4116 LSVEPEKLGSQYPQDLEISDLKIPTALAVDWLGRNLYILDFQTFTDRPPKGRLLVTKLDG 4175
Query: 181 TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK--IY 238
R L +I P + +DP G LFW+D G+NP+IE +DGS R TI+S+K +
Sbjct: 4176 RYRRTLHDTDIEMPTSVAVDPEAGV--LFWSDAGKNPKIETSWLDGSRRQTILSSKNRVI 4233
Query: 239 WPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGK 298
P GL +D Y + R+LYW+D + I
Sbjct: 4234 SPGGLVID----------------------------YVSGDRRLYWVDPKLS----TIES 4261
Query: 299 ANMDGSNASILVSGQLYEALALDLENGMLYYS 330
A DGS +++ Q +ALDL +Y+S
Sbjct: 4262 ARPDGS-GRLVIKNQTVHPIALDLFGDTMYWS 4292
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 99/197 (50%), Gaps = 22/197 (11%)
Query: 147 GLDLVEGLAYDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
G + + GLA DWI +Y+ + N IEV D NG +R+VL K PR + +DP
Sbjct: 2130 GSNGIRGLAVDWINHLLYFSNVFPHENFIEVSDLNGGSRMVLLKTTTEAPRELAVDPV-- 2187
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
R+L+W D G+ P+IER MD +NR++I+ I P+ + +DIA+ +Y+ D ++D ++
Sbjct: 2188 KRYLYWIDSGQYPKIERALMDCTNRTSIVVEDIISPSDIAVDIASGDIYWVDKRVDRLES 2247
Query: 265 KSLEIKTNVNYSTIFRK----------LYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
+ ++ K ++W D + KI K+ +G+ ++ +
Sbjct: 2248 CRFDGSNRRTLASRLPKPMGVAIYGDWVFWADRNLRSI-FKIRKSETNGTVYTVKSDLNM 2306
Query: 315 YEALALDLENGMLYYST 331
L + M+YY+T
Sbjct: 2307 -------LRDVMVYYNT 2316
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 106/240 (44%), Gaps = 51/240 (21%)
Query: 78 GYCSQMCTNTKGS--------YICSCNEGYVLEYDNHTCKAIN----------------- 112
G C MC ++G+ Y C C+ GY L D +C+ +
Sbjct: 636 GNCDHMCILSRGTGSGVYRLGYKCVCDTGYELAEDRKSCRKVETFLLYSQQKSVRGTLMD 695
Query: 113 -----HSAAFLIISNRHSILVA---DLEE----------------KGKDHRAQDIVVSGL 148
S A + I+++ + V D E K ++++ +
Sbjct: 696 LRSDAFSDAMIPIASKSARFVGIDFDAHEGFIYTSDVILDVIARVKPDGSGKENVLAAQH 755
Query: 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
+ VEG+A DW+ ++Y++DSR + V + T + + N+ +PR +++ P+ G ++
Sbjct: 756 EGVEGIALDWVTKNLYFVDSRKGTMVVINTRDTQQRKILMSNLRRPRAIVVHPNKG--YI 813
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
F++ W I R +DG+N+ + + WPNGL +D RVY+ D+ LD I +L+
Sbjct: 814 FYSVWDRPANISRAHLDGTNQQVVRGVSLGWPNGLAIDYELDRVYWCDALLDHIQHSNLD 873
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 138/350 (39%), Gaps = 70/350 (20%)
Query: 70 DMNECEQPGYCSQMC---TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
D N C + C+ +C + K Y C C GY L+ + + FL++ +
Sbjct: 1680 DANPCAE-APCTHLCLLSPSRKEGYACKCPPGYTLDRSSANGACVPLDKPFLMVLRGSQL 1738
Query: 127 LVADLEEK-GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT-NRI 184
+ +LE K GK Q + GL+ YD G IY + + ++ +NGT RI
Sbjct: 1739 VDMNLEPKAGKSSAGQISSIIGLEKAREFDYDQKDGFIYLVKT----VDDDKDNGTLFRI 1794
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFW--------TDWGENPRIERIGMDGSNRSTIIS-- 234
L N+T+ +P T + W N + ++G + R+ I+S
Sbjct: 1795 SLKDANVTKFLSSAFVGAPYTVAVDWIGRNLYVGNRKASNIEVVKLGERKNFRTVILSND 1854
Query: 235 ---TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
T + P + LD I+ KL+W+D GG
Sbjct: 1855 GRDTGVGKPQAIALD------------------------------PIYGKLFWLDSGGVN 1884
Query: 292 VPLKIGKANMDGSNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
VP K+ A+M G + +L+ L E+L++D +Y+S + I
Sbjct: 1885 VPTKLASASMSGEDPKVLLLNGLGNIESLSIDPTAQRIYFSR------------SHSGAI 1932
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS---KLDFIDFCN 396
E + G+ R TI S + L++ + +VYF DS K+ +ID N
Sbjct: 1933 ESVDYAGNGRRTIYSDDVRIQRPLSIAVYNHKVYFLDSAHEKVSYIDLQN 1982
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 45/224 (20%)
Query: 113 HSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNR 172
H F I +IL D + G++ I+ ++ EG+A+DW IY+ DS
Sbjct: 2410 HRMYFTKIRPDGAILWMDSD--GQNQEVHVILNKTVN-PEGIAFDWTHKKIYFADSANRS 2466
Query: 173 IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG---ENPRIERIGMDGSNR 229
I + +G++ +++A N+ +PR ++LDP G ++++TDWG +I R M G+N+
Sbjct: 2467 IYAMNTDGSDIVMIA--NVERPRAIVLDPCEG--FMYYTDWGRYGHTGKIYRSTMAGNNK 2522
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+ I+S + P+GL +D R KLYW D
Sbjct: 2523 TAIVSGNLTQPSGLAVDYEDR------------------------------KLYWTD--- 2549
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
+ KI ++N+DG++ L+S +Y A+ + +Y++ L+
Sbjct: 2550 -ALREKIERSNLDGTDREELISATIY-PFAITVFGPYIYWTDLQ 2591
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 114/273 (41%), Gaps = 47/273 (17%)
Query: 135 GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
G+D R SG G + + +I + + R D T + N T
Sbjct: 2343 GRDFRC--ACASGELDANGRSCSSVKQYIVFATRKEIRSMFLDPMKTAVPFPPRANFTNL 2400
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRST-IISTKIYWPNGLTLDIATRRVY 253
GM D + G R +++T + I + DG N+ +I K P G+ D +++Y
Sbjct: 2401 VGMDFDYA-GHR-MYFTKIRPDGAILWMDSDGQNQEVHVILNKTVNPEGIAFDWTHKKIY 2458
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
FADS R +Y + N DGS+ ++ + +
Sbjct: 2459 FADS--------------------ANRSIYAM--------------NTDGSDIVMIANVE 2484
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
A+ LD G +YY+ W +G +I R M G+N++ I+S + P+GL
Sbjct: 2485 RPRAIVLDPCEGFMYYTD--------WGRYGHTGKIYRSTMAGNNKTAIVSGNLTQPSGL 2536
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+D R++Y+ D+ + I+ N DGT R+++I
Sbjct: 2537 AVDYEDRKLYWTDALREKIERSNLDGTDREELI 2569
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 45/213 (21%)
Query: 197 MMLDPSPGTRWLFWTDWGENPR--IERIGMDGSNRSTIISTKI--YWPNGLTLDIATRRV 252
+ LD + + ++W ++ + PR I I DGS+ +I I GL +D +
Sbjct: 2087 LHLDMTYSDKRIYWIEFNQGPRNGIFSILTDGSDTKHVIKDGIGSNGIRGLAVDWINHLL 2146
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
YF +NV F ++ ++ G V LK +
Sbjct: 2147 YF----------------SNVFPHENFIEVSDLNGGSRMVLLK--------------TTT 2176
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
+ LA+D R+L+W D G+ P+IER MD +NR++I+ I P+
Sbjct: 2177 EAPRELAVD-----------PVKRYLYWIDSGQYPKIERALMDCTNRTSIVVEDIISPSD 2225
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+ +DIA+ +Y+ D ++D ++ C +DG+ R+ +
Sbjct: 2226 IAVDIASGDIYWVDKRVDRLESCRFDGSNRRTL 2258
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 138/358 (38%), Gaps = 89/358 (24%)
Query: 116 AFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEV 175
A + +NR SI+V D ++S D+ A D G IYW+D R++R+E
Sbjct: 2205 ALMDCTNRTSIVVED-------------IISPSDI----AVDIASGDIYWVDKRVDRLES 2247
Query: 176 CDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP--RIERIGMDG------S 227
C +G+NR LA + +P G+ + W+FW D +I + +G S
Sbjct: 2248 CRFDGSNRRTLAS-RLPKPMGVAI----YGDWVFWADRNLRSIFKIRKSETNGTVYTVKS 2302
Query: 228 NRSTIISTKIYWPNG-------------------LTLDIATR--RVYFADSKLDFIDCKS 266
+ + + +Y+ G L ++I R R A +LD
Sbjct: 2303 DLNMLRDVMVYYNTGQIQADSPCNSAGCDQLCFPLPMNINGRDFRCACASGELDANGRSC 2362
Query: 267 LEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
+K + ++T + ++D VP +N + LV + D
Sbjct: 2363 SSVKQYIVFATRKEIRSMFLDPMKTAVPFP------PRANFTNLV------GMDFDYAGH 2410
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST-IISTKIYWPNGLTLDIATRRVYF 384
+Y++ ++ + W D DG N+ +I K P G+ D +++YF
Sbjct: 2411 RMYFTKIRPDGAILWMD-----------SDGQNQEVHVILNKTVNPEGIAFDWTHKKIYF 2459
Query: 385 ADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
ADS I N DG+ I++ VE A+ LD G +YY+ G
Sbjct: 2460 ADSANRSIYAMNTDGSD----IVMIANVERPR---------AIVLDPCEGFMYYTDWG 2504
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 144/345 (41%), Gaps = 43/345 (12%)
Query: 118 LIISNRHS--ILVADLEEKGKDHR----AQDIVVSGLDLVEGLAYDWIGGHIYWLDSR-- 169
L + NR + I V L E+ K+ R + D +G+ + +A D I G ++WLDS
Sbjct: 1825 LYVGNRKASNIEVVKLGER-KNFRTVILSNDGRDTGVGKPQAIALDPIYGKLFWLDSGGV 1883
Query: 170 --LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227
++ +G + VL + + + +DP+ + + G IE + G+
Sbjct: 1884 NVPTKLASASMSGEDPKVLLLNGLGNIESLSIDPTAQRIYFSRSHSGA---IESVDYAGN 1940
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADS---KLDFIDCKSLEIKTNV--NYSTI-FRK 281
R TI S + L++ + +VYF DS K+ +ID ++ +T + N S + F K
Sbjct: 1941 GRRTIYSDDVRIQRPLSIAVYNHKVYFLDSAHEKVSYIDLQNGNTETVIEDNLSDLQFLK 2000
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILV--SGQLYEALALDLENGMLYYSTLKCTRWLF 339
+Y P +G A I V SG + L G + + C+ +
Sbjct: 2001 VYGKRPEAPQHPCLTN----NGGCAQICVPTSGNSRKCLC---SIGFTVSAEVFCSPYNE 2053
Query: 340 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI--ATRRVY---FADSKLDFIDF 394
+ + E + + ++ S + N L LD+ + +R+Y F + I
Sbjct: 2054 FLVYSELEKASAVSLENSGSEAMPPIAGPGHNILHLDMTYSDKRIYWIEFNQGPRNGIFS 2113
Query: 395 CNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYS 439
DG+ + VI D +G NG+ LA+D N +LY+S
Sbjct: 2114 ILTDGSDTKHVI---------KDGIGSNGIRGLAVDWINHLLYFS 2149
>gi|348508901|ref|XP_003441991.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Oreochromis niloticus]
Length = 4633
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 140/304 (46%), Positives = 179/304 (58%), Gaps = 43/304 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
+++ C++ KVCDG+ DCPNGADE P C+ +C G CS+ C P GA CTCPPG
Sbjct: 1325 ISEVCIDQDKVCDGQRDCPNGADESPICNEDDCSLSNGGCSDGCVQGPFGAECTCPPGYQ 1384
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
L NDS TC D+NEC PG+CSQ C N +GS+ C C++GY+LE D TCKA N SAA L++
Sbjct: 1385 LLNDSKTCDDINECLVPGFCSQQCYNERGSFRCHCSDGYLLEPDGRTCKATNPSAAVLLL 1444
Query: 121 SNRHSILV---------------------------------ADLEEK--------GKDHR 139
+ R I+ AD EK G D +
Sbjct: 1445 AKRSQIIANRVNIRPPLMSPVITGSSIVTVDFDSVTNKIYWADTTEKKIWSAYQNGTDKQ 1504
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
A + SGL + E +A DW+G ++YW DS + IEV +G R VL NIT PRG+ L
Sbjct: 1505 A--VFSSGLMVTESIAVDWVGRNLYWTDSVMENIEVSTLDGRFRKVLLSKNITNPRGLAL 1562
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP T +FW+DWG+NPRIE+ MDG+ R I+STKIYWPNGL LD T+RVYFAD+ L
Sbjct: 1563 DPRNHTNLMFWSDWGQNPRIEQASMDGTMRKVIVSTKIYWPNGLALDYTTQRVYFADAYL 1622
Query: 260 DFID 263
+ID
Sbjct: 1623 RYID 1626
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/345 (34%), Positives = 175/345 (50%), Gaps = 66/345 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGE 59
C+ + VCD K DCP G DE C L C C CHP+P G C CP G
Sbjct: 282 CIPVGNVCDDKPDCPGGTDETNTTAQQTCGLERCAAL--SCEFYCHPSPQGGACYCPDGF 339
Query: 60 ILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF-- 117
I++NDS +C D N+C+ G C Q+C + G++ CSC +GYVLE H C+A N SA
Sbjct: 340 IVANDSRSCVDYNDCQIWGICDQLCEDRPGTHHCSCADGYVLE-QGHVCRA-NVSAGLPQ 397
Query: 118 LIISNRHSILVADLE---------EKGKDHRA---------------------------- 140
LI +N +++ADL +GK
Sbjct: 398 LIFTNGGDVMIADLHGRIVRILVPSQGKGLAVAVDYSWHNDKVFWSDTYTKKVYSANYYG 457
Query: 141 ---QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
++I+ + + V+ +A DWI +Y L++R+ RI+VCD +G NR+ L +N+ P G+
Sbjct: 458 GDIKEILTNSVHSVQNIAVDWINLKLYVLEARVERIDVCDFDGGNRVTLVAENLRTPHGL 517
Query: 198 MLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
LDP+ G ++F+TD G ++ER MDGSNR ++ +++ P G+TLDI T+RVY+
Sbjct: 518 ALDPTVG--YMFFTDMGGTNVQSKLERAFMDGSNRFELVKSRLGTPTGITLDIITQRVYW 575
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKA 299
+DS D ++ V YS + RKL + GG P G A
Sbjct: 576 SDSHFDTVE--------TVTYSGLDRKL--VLNGGTQSPHPFGIA 610
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 126/419 (30%), Positives = 186/419 (44%), Gaps = 104/419 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC----KHKFGLCSNTCHPTPLGALCTCPPGE 59
C++ KVC+G+ DC + +DE GC + EC HK C+ C T G C+C PG
Sbjct: 3089 ECIDSNKVCNGQKDCQDDSDE-KGCGINECLDPAVHK---CAQICTDTLTGYYCSCNPGY 3144
Query: 60 ILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL 118
L D C+D++EC P CSQ+C N+ GSY C C GY+ E D TC+ + +L
Sbjct: 3145 QLMPDGKACEDLDECVSTPAVCSQICENSFGSYHCKCAPGYIREPDGRTCRQNSGINPYL 3204
Query: 119 IISNRHSI----------------------LVADLEEK---------GKDHRA------- 140
+ +NR+ I L D EK GK R
Sbjct: 3205 LYTNRYYIRNLTTDGLQLSIVLQGLTNVVALEFDHYEKRLYWLDVGAGKIERMRFDGSDR 3264
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN---------I 191
+ +V + + EGLA DW+G +YW+D + V + +G + L + I
Sbjct: 3265 ETLVSNDIGGAEGLALDWVGRKLYWVDRYYGSVHVIELDGRYQKKLLSGHFTDRNHTYVI 3324
Query: 192 TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
T+PR + ++P G WL+WTDWG+ I R GMDG+N S II+TK+ WPN LT+D +
Sbjct: 3325 TRPRAVAVNPKYG--WLYWTDWGDAAYIGRAGMDGTNVSAIITTKLEWPNALTIDYTNNK 3382
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
++FADS L+F+D A+MDG N ++
Sbjct: 3383 IFFADSHLNFLD----------------------------------FADMDGQNRHRAIA 3408
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 370
G L A+ L W++WTDW + +E+ T++ + P
Sbjct: 3409 GSLPHVYAISLFE-----------DWVYWTDWNTH-TVEKAHKYTGEERTVMGNNTHRP 3455
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 138/323 (42%), Gaps = 71/323 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-------GPGCDLAECKHKFGLCSNTCHPTPLGALCTCP 56
CV L VCD +C + DE CD C+HK C+N G +C+C
Sbjct: 3943 HCVALPYVCDHNDNCGDRTDEMGCNFGLDRNCDENLCQHK---CTNL---NGTGFICSCR 3996
Query: 57 PGEILSNDSV-TCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA 115
PG + DS TC D+NECE G C Q+C NTKG Y C C GY + C+A +
Sbjct: 3997 PGYTVDPDSTYTCLDINECEVYGTCPQVCKNTKGGYDCECAPGYRKVGNGKMCEAAGAAP 4056
Query: 116 AFLI-------------------ISNRHSILVADLE--------------EKGKDH---- 138
L+ I + I+ D + GKD
Sbjct: 4057 MLLLPENIRIRRFNLQTEGYHDFIEEQEHIMALDYDWDHNNTGFSMVYFTVAGKDAIPGA 4116
Query: 139 -----------------RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
A D+ + + +G+A DW+G ++YW DS L R+EV +G
Sbjct: 4117 IKRAYIPSVDDGSNNIGAAVDLGIKYITSPDGIAVDWVGRNLYWADSTLQRLEVALLDGR 4176
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
R L K ++ P + ++P G L+W D G +IE +DG R ++S + WP
Sbjct: 4177 YRKHLVKTDLGHPSAVAVNPRLGM--LYWADRGTTAKIECSWLDGQERKVLVSDGLGWPT 4234
Query: 242 GLTLDIATR-RVYFADSKLDFID 263
GL++D R+Y++DSK I+
Sbjct: 4235 GLSIDFTNNDRIYWSDSKESRIE 4257
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 108/238 (45%), Gaps = 50/238 (21%)
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
++S LD EGLA+DWI IY+ D ++ +G NR ++A N P+G+++DP
Sbjct: 2464 IISNLDDPEGLAFDWINKRIYFTDYFKRNVQSIGVDGGNRSIIAPAN--WPKGIIVDPCY 2521
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +L+WTDWG +IER + G+ R+ IIST + PNGL++D R +Y+AD LD
Sbjct: 2522 G--YLYWTDWGSPAKIERATLGGNFRTVIISTGLTSPNGLSIDYEERMLYWADVSLD--- 2576
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
KI ++ + G N +++ G Y
Sbjct: 2577 -------------------------------KIERSTLTGENREVIMQGLSYPF------ 2599
Query: 324 NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 381
GM Y + +FWTDW E DGS + + Y P + + +++
Sbjct: 2600 -GMTIYK-----QDIFWTDWTERGVFRASKNDGSGFTVLAQNLEYLPKDIHIHAESKQ 2651
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 116/252 (46%), Gaps = 37/252 (14%)
Query: 33 CKHKFGLCSNTCHPTPLGA-LCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
C G C + C P P C C G S D +CQ+ Y S +T+ SY
Sbjct: 2025 CSSNNGGCPHLCLPKPDNKKTCACTTGFHPSPDGSSCQE--------YESFAVVSTR-SY 2075
Query: 92 ICSCNEGYVLEYDNHTCKAINHSAAFLIISNR-----------------HSILVADLEEK 134
I G+ + +H+ + + +I ++ +S + +
Sbjct: 2076 I----RGFHVNSSDHSEAMVPVGGSSYVIHDKVDAHIESGYVYWTENSTYSTYKGIFKAR 2131
Query: 135 GKDHRAQDIVVSGLDL--VEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDN 190
++ SG+ + ++GLA DWI ++Y+ ++ +EV N T R++L K +
Sbjct: 2132 TDGGHYTRVLPSGVGVRGIQGLAVDWIANNLYFTNAHKTETYLEVMAINTTFRMILIKSS 2191
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
QPR + + SP R+LFWTD G+ P+IER +DG+NR+ + S + P GLT+D +
Sbjct: 2192 EDQPRDVAV--SPKLRYLFWTDAGQTPKIERALLDGTNRTVLASESLASPRGLTVDYSNN 2249
Query: 251 RVYFADSKLDFI 262
+Y+ D LD I
Sbjct: 2250 FLYWTDDVLDMI 2261
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 155/371 (41%), Gaps = 70/371 (18%)
Query: 56 PPGEILSNDSVTCQDMNECEQPGYCSQMC---TNTKGSYICSCNEGYVLEYDNHTCKAIN 112
P G ++++ +N C + C+Q+C T Y C C G+ L+ D TC +
Sbjct: 1689 PMGIVMAHPIKQPTAINPCSE-HLCTQLCLLSTLRPRYYTCHCQSGWKLDADKRTC--VK 1745
Query: 113 HSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNR 172
AFL++ I L+ + A VSG+ + +D +YW+ S +
Sbjct: 1746 DETAFLMVVRDTVIFGIPLDPTDPSNNAM-TPVSGISQGRDIDFDDQEQFVYWVQS-TDS 1803
Query: 173 IEVCDENGTNRIVLAKDN-ITQPRGMMLDPSPGTRWLFWTDWGENPR---IERIGMDGSN 228
I +GTN+ A + P G+ D W+ + NP IE I +DGS
Sbjct: 1804 IWRVKTDGTNKTQFAPAAFMGSPAGLAFD------WIGRIMYYTNPTAKTIEVIRVDGSE 1857
Query: 229 --RSTIISTK-----IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRK 281
R +I++ + P G+ LD A K
Sbjct: 1858 HYRKILITSNGKPEGVGEPIGIVLDPARG------------------------------K 1887
Query: 282 LYWIDEGGN-GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFW 340
L+W D+G + GVP K+ A+MDGSN L +G + + + ST+K L+W
Sbjct: 1888 LFWSDKGSDSGVPPKVASADMDGSNLVNLYTGNMANIGFITAD-----ISTMK----LYW 1938
Query: 341 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
G IER MDG++R T++S+ + P GLT I +Y+ D + I+ + + T
Sbjct: 1939 GVAGTG-VIERGTMDGASRVTVVSS-LSHPWGLT--IYQNYLYYTDLDYEVIERVDKE-T 1993
Query: 401 GRQQVILIDLM 411
G V++ M
Sbjct: 1994 GANMVVMRSGM 2004
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 27/219 (12%)
Query: 202 SPGTRWLFWTDWGE------NPRIERIGMDGSNRSTIISTKIYWPNGLTL--DIATRRVY 253
S G L +T+ G+ + RI RI + + ++ W N D T++VY
Sbjct: 392 SAGLPQLIFTNGGDVMIADLHGRIVRILVPSQGKGLAVAVDYSWHNDKVFWSDTYTKKVY 451
Query: 254 FAD---SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
A+ + I S+ N+ I KLY ++ +I + DG N LV
Sbjct: 452 SANYYGGDIKEILTNSVHSVQNIAVDWINLKLYVLE----ARVERIDVCDFDGGNRVTLV 507
Query: 311 SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKI 367
+ L L L+ + Y +F+TD G ++ER MDGSNR ++ +++
Sbjct: 508 AENLRTPHGLALDPTVGY---------MFFTDMGGTNVQSKLERAFMDGSNRFELVKSRL 558
Query: 368 YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
P G+TLDI T+RVY++DS D ++ Y G R+ V+
Sbjct: 559 GTPTGITLDIITQRVYWSDSHFDTVETVTYSGLDRKLVL 597
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 33/190 (17%)
Query: 242 GLTLDIATRRVYFAD------SKLDFIDCKS-----------LEIKTNVNYSTIFRKLYW 284
GL D +R++F S++ +I S L+ + + I +++Y+
Sbjct: 2426 GLDYDFREKRIFFTQYVGIGRSRIGYITTTSVTSPPVTIISNLDDPEGLAFDWINKRIYF 2485
Query: 285 IDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWG 344
D + +DG N SI+ + + +D C +L+WTDWG
Sbjct: 2486 TDY----FKRNVQSIGVDGGNRSIIAPANWPKGIIVD-----------PCYGYLYWTDWG 2530
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
+IER + G+ R+ IIST + PNGL++D R +Y+AD LD I+ G R +
Sbjct: 2531 SPAKIERATLGGNFRTVIISTGLTSPNGLSIDYEERMLYWADVSLDKIERSTLTGENR-E 2589
Query: 405 VILIDLMVEF 414
VI+ L F
Sbjct: 2590 VIMQGLSYPF 2599
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 18/185 (9%)
Query: 98 GYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVS-GLDLVEGLAY 156
G +E+D N A F ++ I ++L D Q I+ + +V+ +AY
Sbjct: 747 GSAVEFDG------NEEAVFYNDRSKGLIYKSNL-----DGSVQQILTGYRVGIVDAMAY 795
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW ++W S + + +R + + P+G+ + PS G +LFW+DW
Sbjct: 796 DWTSKVLFWTTSTYSSVVAFRVTDKSRRDIVT-GLGNPKGIAVHPSAG--YLFWSDWYRP 852
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD---FIDCKSLEIKTNV 273
I R DGSN +++T + WP GL +D R+Y+ D+ LD ID + + KT
Sbjct: 853 AVITRGFTDGSNAVPLVNTTLGWPFGLAVDYMNDRLYWVDTLLDQIGHIDIEGSDRKTFT 912
Query: 274 NYSTI 278
N I
Sbjct: 913 NIGQI 917
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 125/323 (38%), Gaps = 64/323 (19%)
Query: 145 VSGLDLVEGLAYDW----IGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML- 199
S + +V L++ W ++Y+ D IE D+ +V+ + ++ G+ +
Sbjct: 1954 ASRVTVVSSLSHPWGLTIYQNYLYYTDLDYEVIERVDKETGANMVVMRSGMSGLHGLKVH 2013
Query: 200 --DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG--------LTLDIAT 249
D S GT ++ G P + D N+ T T + P+ + + +
Sbjct: 2014 ARDNSAGTTNACSSNNGGCPHLCLPKPD--NKKTCACTTGFHPSPDGSSCQEYESFAVVS 2071
Query: 250 RRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKL---------YWIDEGGNGVPLKIGKAN 300
R Y ++ D + + I K+ YW + I KA
Sbjct: 2072 TRSYIRGFHVNSSDHSEAMVPVGGSSYVIHDKVDAHIESGYVYWTENSTYSTYKGIFKAR 2131
Query: 301 MDGSNAS-ILVSG---QLYEALALDLENGMLYYSTLKCT--------------------- 335
DG + + +L SG + + LA+D LY++ T
Sbjct: 2132 TDGGHYTRVLPSGVGVRGIQGLAVDWIANNLYFTNAHKTETYLEVMAINTTFRMILIKSS 2191
Query: 336 -------------RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
R+LFWTD G+ P+IER +DG+NR+ + S + P GLT+D + +
Sbjct: 2192 EDQPRDVAVSPKLRYLFWTDAGQTPKIERALLDGTNRTVLASESLASPRGLTVDYSNNFL 2251
Query: 383 YFADSKLDFIDFCNYDGTGRQQV 405
Y+ D LD I DGT RQ +
Sbjct: 2252 YWTDDVLDMISRMAIDGTERQII 2274
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 33/151 (21%)
Query: 296 IGKANMDGSNASILVSGQ--LYEALALDLENGMLY-----YSTLKCTR------------ 336
I K+N+DGS IL + + +A+A D + +L+ YS++ R
Sbjct: 769 IYKSNLDGSVQQILTGYRVGIVDAMAYDWTSKVLFWTTSTYSSVVAFRVTDKSRRDIVTG 828
Query: 337 --------------WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+LFW+DW I R DGSN +++T + WP GL +D R+
Sbjct: 829 LGNPKGIAVHPSAGYLFWSDWYRPAVITRGFTDGSNAVPLVNTTLGWPFGLAVDYMNDRL 888
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
Y+ D+ LD I + +G+ R+ I + +
Sbjct: 889 YWVDTLLDQIGHIDIEGSDRKTFTNIGQITQ 919
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 137/339 (40%), Gaps = 39/339 (11%)
Query: 131 LEEKGKDHRAQDIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI-VLAK 188
+E+ D + ++VS + GLA D+ +Y+ D+ L I+ CD +G NR V+A
Sbjct: 1582 IEQASMDGTMRKVIVSTKIYWPNGLALDYTTQRVYFADAYLRYIDYCDYDGNNRYQVMAS 1641
Query: 189 DNITQ-PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
D + Q P M + ++W++ + + G N +T ++ +Y P G+ +
Sbjct: 1642 DVVLQHPYSMTIFEDT----IYWSEHYTSKVMSTNKFHGGNITTHMN-NVYQPMGIVMAH 1696
Query: 248 ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN--MDGSN 305
+ + I+ S + T + + R Y+ +G L K D +
Sbjct: 1697 PIK-------QPTAINPCSEHLCTQLCLLSTLRPRYYTCHCQSGWKLDADKRTCVKDETA 1749
Query: 306 ASILVSGQLYEALALD----LENGMLYYSTLKCTR---------WLFWTDWGENPRIERI 352
++V + + LD N M S + R +++W ++ I R+
Sbjct: 1750 FLMVVRDTVIFGIPLDPTDPSNNAMTPVSGISQGRDIDFDDQEQFVYWVQSTDS--IWRV 1807
Query: 353 GMDGSNRSTIISTKIYW-PNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
DG+N++ P GL D R +Y+ + I+ DG+ + ILI
Sbjct: 1808 KTDGTNKTQFAPAAFMGSPAGLAFDWIGRIMYYTNPTAKTIEVIRVDGSEHYRKILIT-- 1865
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYSTEGAEFLKTP 449
+N G P + LD G L++S +G++ P
Sbjct: 1866 ---SNGKPEGVGEPIGIVLDPARGKLFWSDKGSDSGVPP 1901
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ +GL GL+ D+ +YW D L++IE G NR V+ + ++ P GM +
Sbjct: 2548 IISTGLTSPNGLSIDYEERMLYWADVSLDKIERSTLTGENREVIMQ-GLSYPFGMTI--- 2603
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
+ +FWTDW E DGS + + Y P + + +++
Sbjct: 2604 -YKQDIFWTDWTERGVFRASKNDGSGFTVLAQNLEYLPKDIHIHAESKQ 2651
>gi|47219712|emb|CAG12634.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3848
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 152/418 (36%), Positives = 217/418 (51%), Gaps = 87/418 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C++L KVCDG++DCPNGADE P C+ +C G CS+ C P GA C+CP G L ND
Sbjct: 1143 CIDLDKVCDGQSDCPNGADESPICNQDDCILNNGGCSDICTQGPFGAQCSCPSGFQLLND 1202
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D+NEC PG+CSQ C N +GS+ C C+EGY+LE D TCKAI+ A L+I+ R
Sbjct: 1203 SKTCEDINECLIPGFCSQECYNERGSFRCYCSEGYLLEPDGRTCKAIDTQDAVLLIAKRS 1262
Query: 125 SILV---------------------------------ADLEEK--------GKDHRAQDI 143
I+ AD +K G D R ++
Sbjct: 1263 QIIANWVNKKPPQMKPVVSGSSIVTVDFDRVTSRIYWADASQKKIWSSYQNGTDKR--EV 1320
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+GL + E +A DW+G ++YW DS + IEV +G R VL N+T PRG++LDP
Sbjct: 1321 FSTGLMVPESIAVDWVGRNLYWTDSVMENIEVSTLDGRFRKVLLSKNVTSPRGLVLDPRN 1380
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
T +FW+DWG+NPRIER MDG+ R I+STK+YWPNGL LD T R+YFAD+ L +ID
Sbjct: 1381 HTNLMFWSDWGQNPRIERAFMDGTVRQVIVSTKLYWPNGLALDYTTHRIYFADAYLKYID 1440
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
+ DGSN +++ + L
Sbjct: 1441 ----------------------------------YCSYDGSNRHQVMASN----MVLQHP 1462
Query: 324 NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 381
+GM + +++W++ + + GSN +T++S+ +Y P G+ +D ++
Sbjct: 1463 HGMTIFEN-----YVYWSERYTSKVMRTNKFHGSNFTTVMSS-VYQPMGIVMDHPIKQ 1514
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/415 (29%), Positives = 184/415 (44%), Gaps = 97/415 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
+C++ +VCDG+ DCP+ +DE GC + EC + C+ C T G C+C PG L
Sbjct: 2840 QCIDTNRVCDGQKDCPDNSDE-KGCGINECTNPSVHKCAQLCTDTLTGYYCSCQPGYRLM 2898
Query: 63 NDSVTCQDMNECEQ-PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D C+D+NEC P CSQ+C N GSY C C GY+ E D TC+ + A +L+ S
Sbjct: 2899 PDGKACEDINECSSTPAVCSQICENVVGSYYCKCAPGYIREADGRTCRQNSGIAPYLLYS 2958
Query: 122 NRHSI--------------------LVADLEEKGK-----------------DHRAQDIV 144
NR+ I + D + K D ++++
Sbjct: 2959 NRYYIRNLTTDGSHLSIVLQGLTNAVALDFDHSEKRLYWLDAGTRKIERMRFDGTDREVL 3018
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN---------ITQPR 195
+ + EGLA DW+G +YW DS + V + NG + L + I++PR
Sbjct: 3019 ANDVMAAEGLALDWVGRKLYWTDSYYGSVHVMELNGLYQRKLLSGHFKEGNSTYIISRPR 3078
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ ++P G W++WTDW + I R GMDG N S II+TK+ WP+ LT+D T R++FA
Sbjct: 3079 AVAVNPKYG--WVYWTDWADMAYIGRAGMDGRNVSAIITTKLEWPSALTIDYTTNRIFFA 3136
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
DS L+F+D A+MDG N V G L
Sbjct: 3137 DSHLNFLD----------------------------------FADMDGQNRHRAVGGTLP 3162
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 370
A+ L W++WTDW + +E+ T++ + P
Sbjct: 3163 HVFAVSLFED-----------WVYWTDWNTH-TVEKAHKYTGEMRTVMGNNTHRP 3205
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 167/395 (42%), Gaps = 47/395 (11%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C N ++ C+G DC +G+DE C L C C CHP+P G C CP G ++ND
Sbjct: 76 CYNNSQHCNGLQDCRDGSDEF-NCSLQRCATL--SCEYMCHPSPQGGACYCPDGFTVAND 132
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA-INHSAAFLIISNR 123
S +C D ++C+ G C +C + GS+ CSC +GY LE H CKA ++ LI +N
Sbjct: 133 SRSCVDYDDCQIWGICDHLCEDRPGSHQCSCADGYFLE-QGHICKANVSGGLPQLIFTNG 191
Query: 124 HSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR 183
+++AD+ G+ R + G G+AY W ++W D+ +
Sbjct: 192 GDVMMADIH--GRFVRTL-VPSQGRGYAVGVAYHWHSSTVFWSDTNTQK----------- 237
Query: 184 IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN---RSTIISTKIYWP 240
Q G L+ T W W W + + +G S+ + + T +W
Sbjct: 238 -QFTASRTLQWTGSTLN---STSWRPW--WNASMCVISVGRTASHWWLKICRVLTVSHWT 291
Query: 241 N--------GLT-LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
G T + + T++ + + +LE + + +++ D G
Sbjct: 292 RQWGAFTFCGFTNITVNTQKHSWNRRCILLKSFLTLEKPRILTLLCVCSYMFFTDMGTAT 351
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
+K+ +A MDGSN LV +L A+ ++ T+ ++WTD + +E
Sbjct: 352 EQVKLERAFMDGSNRVELVKKRLGIPAAITVD---------IVTKRVYWTDIHFD-TVET 401
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 386
+ G +R +++ P + ++F D
Sbjct: 402 VTYSGLDRKIVLNGGTKAPYPFGIATFENHLFFTD 436
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 122/255 (47%), Gaps = 24/255 (9%)
Query: 23 DEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSNDSVTCQDMNECEQPGYCS 81
D+ G D A C G C+ C P P C C G I+S D CEQ +
Sbjct: 1824 DDSAGTDNA-CSSNNGGCAQLCLPKPDHQKTCACTTGFIMSPDGT------RCEQYESYA 1876
Query: 82 QMCTNT--KGSYICSCNEGYVL---EYDNHTCKA-----INHSAAFLIISNRHSILVADL 131
+ T+ +G +I S + + +++ K I + I ++ +S
Sbjct: 1877 VVSTDKYIRGFHINSSDHSEAMVPISGSSYSVKGTMDLHIQSGFVYYIDNSTYSSYRGIY 1936
Query: 132 EEKGKDHRAQDIVVSGLDL--VEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLA 187
K ++ SG+ ++GLA DWI G++Y+ ++ + +EV N TNR++L
Sbjct: 1937 RTKTSGGFTTRVIGSGIGKLGIQGLAVDWITGNLYFTNAFESETLLEVHVINTTNRMILL 1996
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
K + QPR + + SP R+LFWTD G+ P+IER +DG+NR+ + S + P GLT+D
Sbjct: 1997 KSSHDQPRDLAV--SPKLRYLFWTDGGQTPKIERALLDGTNRTVLASESLASPRGLTVDY 2054
Query: 248 ATRRVYFADSKLDFI 262
+Y+ D LD I
Sbjct: 2055 TNDFLYWTDDVLDMI 2069
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 112/277 (40%), Gaps = 61/277 (22%)
Query: 57 PGEILSNDSVTCQD-MNEC-EQPGYCSQMCT------NTKGSYICSCNEGYVLEYDNHTC 108
PG ++ + SV MN C G C +C N + C C GY L D+ TC
Sbjct: 463 PGHVVVSHSVLQPVVMNPCGRHNGGCQHICVLSHRTDNDGLGFRCKCRHGYDLHSDHRTC 522
Query: 109 KAINHSAAFLIISNRHSI--------LVADL----------------------EEKGKDH 138
+ FL+I++ ++ L DL E +
Sbjct: 523 FKVKD---FLLIASSLAVRGIPLNLSLQEDLTLPLSGLATSFSGSAVEFDGIKESIFYND 579
Query: 139 RAQDIVVSG--------------LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
R++ +V + +++ +AYDW ++W S + +R
Sbjct: 580 RSRGLVYKSNLNGTVQEILTGYRVGVIDAMAYDWTSNILFWTTSTYQSVVAFKVTDKSRR 639
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
+ + P+G+ + PS G +LFW+DW I R DGSN +++T + WP GL
Sbjct: 640 DIVT-GLRYPKGIAVHPSAG--YLFWSDWYRPAVIMRAFTDGSNAIPLVNTTLGWPYGLA 696
Query: 245 LDIATRRVYFADSKLD---FIDCKSLEIKTNVNYSTI 278
LD T R+Y+ DS+LD ID + + +T N I
Sbjct: 697 LDYITDRLYWVDSQLDQVGHIDIQGSDRQTFTNIGEI 733
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 80/175 (45%), Gaps = 10/175 (5%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE---CKHKFGLCSNTC-HPTPLGALCTCPPGE 59
CV L VCD +C + DE GC+ C+ K LC + C + G +C+C PG
Sbjct: 3649 HCVPLPYVCDHNDNCGDLTDE-LGCNFGNDRNCEEK--LCQHVCTNLNGTGFICSCKPGY 3705
Query: 60 ILSNDSVT-CQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL 118
++ DS T C D++EC+ G C Q C NTKGSY C C GY D C+A + F
Sbjct: 3706 KVNPDSTTTCLDIDECQIYGTCPQFCKNTKGSYDCECAPGYRKVGDGKMCEAEDVRNPFS 3765
Query: 119 IISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI 173
+ + + +EKG+ R QD G+ W+ + R N +
Sbjct: 3766 VCVFEDHVYWS-TQEKGEVFR-QDKFGRGIKTKLLTGGPWLTQVSVYQQQRYNSM 3818
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 12/119 (10%)
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
R+LFWTD G+ P+IER +DG+NR+ + S + P GLT+D +Y+ D LD I
Sbjct: 2013 RYLFWTDGGQTPKIERALLDGTNRTVLASESLASPRGLTVDYTNDFLYWTDDVLDMISRM 2072
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGDNGVPALA-----LDLENGMLYYSTEGAEFLKTP 449
DG+ RQ ++ + + GV L +D + G L+ +++G P
Sbjct: 2073 ASDGSQRQ-------IIRYGSRYPSPVGVAILGNNMLWVDKKLGKLFQASKGNTSSAQP 2124
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 133/329 (40%), Gaps = 69/329 (20%)
Query: 80 CSQMCTNT---KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
C+Q+C + Y C C G+ L+ D TC I + FL++ I L+
Sbjct: 1521 CTQLCLLSGLRPRYYTCHCQSGWKLDADKRTC--IKDESTFLMVVRESVIFGIPLDPNDP 1578
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT-QPR 195
+ A VSG+ + + +D +YW+ + + +V +GTNR A I P
Sbjct: 1579 SNNAM-TPVSGISQGQDIDFDDQEELVYWVQNTGSIWKV-KTSGTNRSEFAPAAIMGSPS 1636
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN--RSTIIST-----KIYWPNGLTLDIA 248
G+ D TR +F+T+ IE I +DGS R T+I++ + P G+ +D A
Sbjct: 1637 GLAFDWI--TRMMFYTN-PTGKSIEVIRVDGSQHYRKTLITSTGKPEETGQPIGIAVDPA 1693
Query: 249 TRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
++++ D +G VP K+G A+MDG N
Sbjct: 1694 RGKLFWTD------------------------------KGSENVPPKVGSADMDGGNLKN 1723
Query: 309 LVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPR--IERIGMDGSNRSTIIS 364
L + L L D+ LY WG + IE MDG + T++S
Sbjct: 1724 LYTENLANIGVLTADISASKLY--------------WGVSGSGVIECGTMDGLTKVTVVS 1769
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFID 393
+ P GLT + +Y+ D + I+
Sbjct: 1770 -GLSHPWGLT--VHQNYLYYTDLDYEVIE 1795
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
+LFW+DW I R DGSN +++T + WP GL LD T R+Y+ DS+LD + +
Sbjct: 659 YLFWSDWYRPAVIMRAFTDGSNAIPLVNTTLGWPYGLALDYITDRLYWVDSQLDQVGHID 718
Query: 397 YDGTGRQQVILIDLMVE 413
G+ RQ I + +
Sbjct: 719 IQGSDRQTFTNIGEITQ 735
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 331 TLKCT-RWLFWTDWG---ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 386
TL C ++F+TD G E ++ER MDGSNR ++ ++ P +T+DI T+RVY+ D
Sbjct: 334 TLLCVCSYMFFTDMGTATEQVKLERAFMDGSNRVELVKKRLGIPAAITVDIVTKRVYWTD 393
Query: 387 SKLDFIDFCNYDGTGRQQVI 406
D ++ Y G R+ V+
Sbjct: 394 IHFDTVETVTYSGLDRKIVL 413
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
S L GL+ D+ +YW D+ L++IE G NR ++ + P M +
Sbjct: 2274 SSLTTPNGLSIDYEERMLYWADASLDKIERATLTGENRHIILH-GVVYPYAMTV----FQ 2328
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
+ +FWTDW E GS + + Y PN + + +++ + S F
Sbjct: 2329 QDIFWTDWTERAVFRARKDGGSGFAVLAQDLQYRPNDIHVYAGSKQEMCSSSCQQF 2384
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 57/158 (36%), Gaps = 46/158 (29%)
Query: 240 PNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKA 299
PNGL++D R +Y+AD+ LD KI +A
Sbjct: 2279 PNGLSIDYEERMLYWADASLD----------------------------------KIERA 2304
Query: 300 NMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNR 359
+ G N I++ G +Y Y+ + +FWTDW E GS
Sbjct: 2305 TLTGENRHIILHGVVYP------------YAMTVFQQDIFWTDWTERAVFRARKDGGSGF 2352
Query: 360 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
+ + Y PN + + +++ + S F C++
Sbjct: 2353 AVLAQDLQYRPNDIHVYAGSKQEMCSSSCQQFNGGCSH 2390
>gi|317419385|emb|CBN81422.1| Low-density lipoprotein receptor-related protein 2 [Dicentrarchus
labrax]
Length = 4562
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 137/300 (45%), Positives = 176/300 (58%), Gaps = 43/300 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C++L KVC+G+ DCPNGADE P C+ +C G CS+ C P G+ CTCP G L ND
Sbjct: 1320 CIDLDKVCNGQRDCPNGADESPICNQDDCALNNGGCSHGCVQGPFGSQCTCPSGFQLLND 1379
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D+NEC PG+CSQ C N +GS+ C C+EGY+LE D TCKA N AA L+++ R
Sbjct: 1380 SKTCEDINECLIPGFCSQQCYNERGSFRCYCSEGYLLEPDGRTCKATNPLAAVLLVAKRS 1439
Query: 125 SILV---------------------------------ADLEEK--------GKDHRAQDI 143
I+ AD +K G D R ++
Sbjct: 1440 QIISQKINMRPPLMNPVVSGSSIVTVDFDRTTSKIYWADASQKKIWSAYQNGTDRR--EV 1497
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
SGL + E +A DW+ ++YW DS L IEV +G R VL N+T PRG++LDP
Sbjct: 1498 FSSGLMVPESIAVDWVARNLYWTDSVLENIEVSTLDGRFRKVLLTKNVTSPRGLVLDPRN 1557
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
T +FW+DWG+NPRIER MDG+ R I+STK+YWPNGL LD TRRVYFAD+ L +ID
Sbjct: 1558 YTNLMFWSDWGQNPRIERADMDGNMRRVIVSTKLYWPNGLALDYTTRRVYFADAYLKYID 1617
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 185/415 (44%), Gaps = 97/415 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ KVC+G+ DC + +DE GC + EC++ C+ C T G C+C PG L
Sbjct: 3087 ECIDANKVCNGQKDCQDNSDE-KGCGINECRNPSVHRCAQICTDTLTGYYCSCHPGYRLM 3145
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D C+D+NEC P CSQ+C N GSY C C GY+ E D TC+ + A +L+ S
Sbjct: 3146 PDGKACEDLNECVSTPAVCSQICENAAGSYHCKCAPGYIREADGRTCRQNSGIAPYLLYS 3205
Query: 122 NRH--------------------SILVADLEEKGK-----------------DHRAQDIV 144
NR+ S++ D + K D ++ +
Sbjct: 3206 NRYYIRNLTTDGSHLSIVVQGLSSVVALDFDHAEKRLYWLDAGTGKIERMRFDGTDRETL 3265
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN---------ITQPR 195
+ EGLA DW+G +YW D + V + +G + L I++PR
Sbjct: 3266 AEDVIGAEGLALDWVGRKLYWSDGYYGSLHVSELDGRFQKKLLSGEFTIGNVTYIISRPR 3325
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ ++P G WL+WTDWG+ I R+GMDGSN + II+TK+ WPN LT+D T +++FA
Sbjct: 3326 AVAVNPKYG--WLYWTDWGDKAYIGRVGMDGSNVTAIITTKLEWPNALTIDYTTNKIFFA 3383
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
DS L+F+D A+MDG N ++G L
Sbjct: 3384 DSHLNFLD----------------------------------FADMDGQNRHRAIAGTLP 3409
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 370
A+ L W++WTDW + +E+ + T++ + P
Sbjct: 3410 HVFAVSLFED-----------WVYWTDWNTH-TVEKAHKYTGEQRTVMGNNTHRP 3452
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/345 (34%), Positives = 179/345 (51%), Gaps = 66/345 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-----CDLAECKHKFGLCSNTCHPTPLGALCTCPPGE 59
C+++ KVCDGK DCP G DE C L +C C CH +P G C CP G
Sbjct: 274 CISVAKVCDGKPDCPGGTDETNSTAEQTCSLEQCSAL--SCEFHCHLSPQGGACYCPDGF 331
Query: 60 ILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF-- 117
I++NDS +C D ++C+ G C QMC + G++ CSC +GY LE H CKA N SA
Sbjct: 332 IVANDSRSCVDYDDCQMWGICDQMCEDRPGTHHCSCADGYFLE-QGHVCKA-NVSAGLPQ 389
Query: 118 LIISNRHSILVADLE---------EKGKDHRA---------------------------- 140
LI + +++AD+ +GK +
Sbjct: 390 LIFTGGGDVMMADIHGRFIRTLVPSQGKGYAVGVAYHWHSNTVFWSDTYTKKVYSANYNG 449
Query: 141 ---QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
++I+ + + V+ LA DW+ +Y L++ + RI++CD +G NR+ L +N+ P G+
Sbjct: 450 DDIKEILTTAVHNVQNLAVDWVNFKLYVLEAMVERIDMCDFDGGNRVTLVAENLQTPHGL 509
Query: 198 MLDPSPGTRWLFWTDWG---ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
+LDP+ G ++F+TD G EN ++ER MDGSNR ++ +++ P G+TLDI T+RVY+
Sbjct: 510 VLDPTVG--YMFFTDMGISSENMKLERAFMDGSNRLELVKSRLGTPTGITLDIVTQRVYW 567
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKA 299
+DS D ++ V YS + RK+ + GG P G A
Sbjct: 568 SDSHFDTVE--------TVTYSGLDRKI--VLNGGTQAPHPFGIA 602
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 146/320 (45%), Gaps = 65/320 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE---CKHKFGLCSNTC-HPTPLGALCTCPPGE 59
CV L VCD +C + DE GC+ C+ K LC + C + G +C+C PG
Sbjct: 3940 HCVALPYVCDHNDNCGDRTDE-LGCNFGHDRNCEEK--LCQHECTNLNGTGFICSCRPGY 3996
Query: 60 ILSNDSV-TCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL 118
+ DS TC D+NECE G C Q+C NTKGSY C C GY + + C+A + L
Sbjct: 3997 RVDPDSTYTCLDINECEVYGTCPQVCKNTKGSYDCECASGYRKVGNGNMCEAEGPTPLLL 4056
Query: 119 IISN---RHSILVAD-----LEEKGK--------DHRAQDI-----VVSGLDLV------ 151
+ N R L + L+E+ DH + V+G D V
Sbjct: 4057 LPENIRIRRFNLQTEAYHDFLQEQEHITALDYDWDHNNTGLSMVYFTVAGKDSVPGAIKR 4116
Query: 152 ---------------------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
+G+A DW+G ++YW DSR+ R+EV +G R
Sbjct: 4117 AYIPSVDDGSNNIGAAVDLGIKYITKPDGIAVDWVGRNLYWADSRVKRLEVAMLDGRYRK 4176
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L K + P + ++P G L+W D GE +IE +DG R ++S + WP GL+
Sbjct: 4177 HLVKTELGHPSAVAVNPQLGM--LYWADRGEAAKIECSWLDGQERKVLVSDGLGWPTGLS 4234
Query: 245 LDIAT-RRVYFADSKLDFID 263
+D A R+Y++DSK I+
Sbjct: 4235 IDFANGDRIYWSDSKESRIE 4254
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 115/254 (45%), Gaps = 50/254 (19%)
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ + LD EGLAYDW+ +Y+ D ++ +G NR ++A N +PRG+++DP
Sbjct: 2462 IATNLDDPEGLAYDWVNKRLYFTDYYSRNVQSIGVDGMNRSIIAHAN--RPRGIVVDPCY 2519
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +L+WTDWG +IER + G+ R+ II+T + PNGL+LD R +Y+AD+ LD
Sbjct: 2520 G--YLYWTDWGFPAKIERATLGGNFRTAIINTGLTTPNGLSLDYEERMLYWADASLD--- 2574
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
KI +A++ G N ++V G Y +
Sbjct: 2575 -------------------------------KIERASLTGENRQVIVQGVQYPFAMTVFQ 2603
Query: 324 NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 383
+FWTDW E DGS+ + + Y PN + + +++
Sbjct: 2604 QD------------IFWTDWTERGVFRARKDDGSDFAVLTQDMQYRPNDIHVYAESKQES 2651
Query: 384 FADSKLDFIDFCNY 397
+ S F C++
Sbjct: 2652 CSSSCQQFNGGCSH 2665
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 72/114 (63%), Gaps = 4/114 (3%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
++GLA DW+ G++Y+ ++ + +EV N T R++L K + QPR + + SP R+L
Sbjct: 2148 IQGLAVDWVAGNLYFTNAFESETFLEVLAINTTYRMILLKTSQDQPRDVAV--SPKLRYL 2205
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
FWTD G+ P+IER +DG+NR+ + S I P+GLT+D +Y+ D LD I
Sbjct: 2206 FWTDGGQTPKIERSLLDGTNRTVLASDGIASPHGLTVDYTNNFLYWTDDVLDII 2259
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 88/182 (48%), Gaps = 32/182 (17%)
Query: 242 GLTLDIATRRVYFAD------SKLDFIDCKSL-----EIKTNVN------YSTIFRKLYW 284
L D +R++FA S++ +I S+ I TN++ Y + ++LY+
Sbjct: 2424 ALDYDFKGKRIFFAQYMGIGRSRIGYITTTSITSPPVNIATNLDDPEGLAYDWVNKRLYF 2483
Query: 285 IDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWG 344
D V IG +DG N SI+ + +D C +L+WTDWG
Sbjct: 2484 TDYYSRNV-QSIG---VDGMNRSIIAHANRPRGIVVD-----------PCYGYLYWTDWG 2528
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
+IER + G+ R+ II+T + PNGL+LD R +Y+AD+ LD I+ + G RQ
Sbjct: 2529 FPAKIERATLGGNFRTAIINTGLTTPNGLSLDYEERMLYWADASLDKIERASLTGENRQV 2588
Query: 405 VI 406
++
Sbjct: 2589 IV 2590
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 21/197 (10%)
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTL--DIATRRVYFADSKLDFID---CKSLEIKTN 272
R R + + + +W + D T++VY A+ D I ++ N
Sbjct: 406 RFIRTLVPSQGKGYAVGVAYHWHSNTVFWSDTYTKKVYSANYNGDDIKEILTTAVHNVQN 465
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+ + KLY ++ + +I + DG N LV+ L L L+ + Y
Sbjct: 466 LAVDWVNFKLYVLE----AMVERIDMCDFDGGNRVTLVAENLQTPHGLVLDPTVGY---- 517
Query: 333 KCTRWLFWTDWG---ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
+F+TD G EN ++ER MDGSNR ++ +++ P G+TLDI T+RVY++DS
Sbjct: 518 -----MFFTDMGISSENMKLERAFMDGSNRLELVKSRLGTPTGITLDIVTQRVYWSDSHF 572
Query: 390 DFIDFCNYDGTGRQQVI 406
D ++ Y G R+ V+
Sbjct: 573 DTVETVTYSGLDRKIVL 589
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 3/128 (2%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
++ +AYDW ++W S + +R + + P+G+ + PS G +LFW
Sbjct: 782 IDAMAYDWTSKVLFWTTSTYRSVVAFRVTDKSRRDIVT-GLRNPKGIAVHPSAG--YLFW 838
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
+DW I + DGSN +++T + WP GL +D R+Y+ DS+LD I +E
Sbjct: 839 SDWYRPAVIMKGFTDGSNAVPLVNTTLGWPYGLAVDYMMNRLYWVDSQLDQIGHIGIEGF 898
Query: 271 TNVNYSTI 278
+S+I
Sbjct: 899 DRQTFSSI 906
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 121/298 (40%), Gaps = 58/298 (19%)
Query: 162 HIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML---DPSPGTRWLFWTDWGENPR 218
H+Y+ D IE D++ +V+ + ++ R + + D S GT ++ G P
Sbjct: 1973 HLYYTDLDYEVIERVDKDSGANMVVMRSGMSGLRALKVHARDNSAGTTNACSSNNGGCPH 2032
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTL-------DIATRRVYFADSKLDFIDCK------ 265
+ + G+ ++ +T Y + +L I + Y ++ D
Sbjct: 2033 L-CLPKPGNQKTCACTTGFYPSHDGSLCEQYDSFAIVSTAKYIRGFHINSSDHSEAMVPV 2091
Query: 266 ---SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN-ASILVSG---QLYEAL 318
S IK ++ LYW D + I +A DG S++ SG + + L
Sbjct: 2092 GGPSYSIKGKLDLHIESGFLYWTDNSTSTSYRGIFRAKTDGGGYRSVINSGVGRRGIQGL 2151
Query: 319 ALDLENGMLYYST---------------------LKCT-------------RWLFWTDWG 344
A+D G LY++ LK + R+LFWTD G
Sbjct: 2152 AVDWVAGNLYFTNAFESETFLEVLAINTTYRMILLKTSQDQPRDVAVSPKLRYLFWTDGG 2211
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
+ P+IER +DG+NR+ + S I P+GLT+D +Y+ D LD I +GT R
Sbjct: 2212 QTPKIERSLLDGTNRTVLASDGIASPHGLTVDYTNNFLYWTDDVLDIISRMAINGTQR 2269
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 110/276 (39%), Gaps = 58/276 (21%)
Query: 71 MNECEQPGYCSQMCTNT---KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL 127
+N C + CSQ+C + Y C C G+ L+ D TC I FL++ I
Sbjct: 1695 INPCRE-HLCSQLCLLSGLRPRYYTCHCQSGWKLDADKRTC--IKDETPFLMVVRDSVIF 1751
Query: 128 VADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
L+ + A VSG+ + +D +YW+ S + +V +GTNR A
Sbjct: 1752 GIPLDPADPSNNAM-APVSGISQGRDIDFDDQEQLVYWVQSTGSIWQV-KTSGTNRSEFA 1809
Query: 188 KDN-ITQPRGMMLDPSPGTRWLFWTDWGENP---RIERIGMDGSN--RSTII-----STK 236
+ P G+ D W+ + NP IE I +DG+ R T+I S +
Sbjct: 1810 PAAFMGSPSGLAFD------WISRVMYYTNPLVKTIEVIRVDGNQHYRKTLITSTGKSEE 1863
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG-NGVPLK 295
+ P G+ LD A +++ W D+G NGVP K
Sbjct: 1864 VGEPIGIALDPARGKLF------------------------------WTDKGSDNGVPPK 1893
Query: 296 IGKANMDGSNASILVSGQLYEA--LALDLENGMLYY 329
+G +MDG N L +G L + D+ LY+
Sbjct: 1894 VGSGDMDGGNLRNLYTGGLANIGYITADISTAKLYW 1929
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
+LFW+DW I + DGSN +++T + WP GL +D R+Y+ DS+LD I
Sbjct: 835 YLFWSDWYRPAVIMKGFTDGSNAVPLVNTTLGWPYGLAVDYMMNRLYWVDSQLDQIGHIG 894
Query: 397 YDGTGRQQVILIDLMVE 413
+G RQ I + +
Sbjct: 895 IEGFDRQTFSSIGQITQ 911
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ +GL GL+ D+ +YW D+ L++IE G NR V+ + + P M +
Sbjct: 2546 IINTGLTTPNGLSLDYEERMLYWADASLDKIERASLTGENRQVIVQ-GVQYPFAMTV--- 2601
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
+ +FWTDW E DGS+ + + Y PN + + +++ + S F
Sbjct: 2602 -FQQDIFWTDWTERGVFRARKDDGSDFAVLTQDMQYRPNDIHVYAESKQESCSSSCQQF 2659
>gi|301614657|ref|XP_002936802.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Xenopus (Silurana) tropicalis]
Length = 4553
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/299 (43%), Positives = 174/299 (58%), Gaps = 40/299 (13%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+N++KVCD DCPNGADE P C+ C C++ C P GA CTCP G LSND
Sbjct: 1351 CINVSKVCDNTPDCPNGADESPLCNQESCTDNNAGCTHQCIQGPFGAQCTCPEGYSLSND 1410
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D+NEC PG+CSQ C N +GSY C C +GY+LE + TCKA + L++++R+
Sbjct: 1411 SKTCEDINECLTPGFCSQTCYNERGSYRCYCEDGYILEPNGRTCKAAGSANLLLLVASRN 1470
Query: 125 SILVADLEEKG-------KDHR-------------------AQD--------------IV 144
I+ ++ + +D R AQD I
Sbjct: 1471 QIIADNITTQAHNIYPVIRDGRTIVAIDFDSVTNRIFWSDIAQDKIWSAFVNGTDRKVIF 1530
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
SG+ + E +A DW+G ++YW D L IEV +GT+R VL +N+T PRG++LDP
Sbjct: 1531 DSGVTVTESIAVDWVGRNLYWTDYVLETIEVSQLDGTHRTVLISENVTNPRGLVLDPRTD 1590
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+FWTDWG NPRIER MDG R+ I+S KIYWPNGL +D +R+YFAD+ LD+ID
Sbjct: 1591 AHVMFWTDWGRNPRIERASMDGKMRTVIVSNKIYWPNGLAIDYPNKRLYFADAYLDYID 1649
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/343 (33%), Positives = 168/343 (48%), Gaps = 63/343 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+C+ + KVCDG C G DE G C C C + CH +P G LC CP G
Sbjct: 304 QCIPVDKVCDGIVHCRFGEDESNITAGRNCSTNNCASL--SCQHRCHSSPAGGLCYCPAG 361
Query: 59 EILS-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
++S NDS TC D ++C+ G C Q C + GSY CSC EGY+LE+ H
Sbjct: 362 YVISSNDSRTCIDFDDCKMWGICDQFCEDRIGSYRCSCAEGYILEHHKHCRANSTRGPPS 421
Query: 118 LIISNRHSILVADLE---------------EKGKDHRAQ--------------------- 141
+I SN +L+ D+ G D Q
Sbjct: 422 IIFSNGRDLLIGDIHGGNSRILVQSHNRGVAVGVDFHFQLRRVFWTDTVQNKVFSVDIDG 481
Query: 142 ----DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+++ ++ E LA DW+ IY +++ + RI++ D +G NRI L +++ PRG+
Sbjct: 482 SNVREVLNISIETPENLAVDWVSNKIYVVETSIKRIDMVDLDGQNRITLIAEDLGNPRGI 541
Query: 198 MLDPSPGTRWLFWTDWGEN---PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
LDPS G +LF++DWG N ++ER MDG+NR II TK+ WP G+TLDI T+R+Y+
Sbjct: 542 ALDPSVG--YLFFSDWGSNSEESKLERAFMDGTNRHDIIKTKLGWPAGMTLDIITKRLYW 599
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
DS+ D+I+ Y + R+ + GGN +P G
Sbjct: 600 VDSRYDYIE--------TTTYDGLDRRT--VVHGGNVIPHPYG 632
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 128/420 (30%), Positives = 191/420 (45%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ VC+G DC + +DE C + EC C + C T CTC PG L +
Sbjct: 3113 CIAQGSVCNGNDDCGDNSDEK-ACGINECNDPSISGCDHNCTDTQTSFFCTCRPGYRLMS 3171
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC E P CSQ+C NT GSYIC C GY+ E + C+ ++ +LI SN
Sbjct: 3172 DKRTCDDIDECSETPSVCSQICENTAGSYICKCAPGYIREPNGRNCRQNSNINPYLIFSN 3231
Query: 123 RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
R+ + L D ++ +++ GL +V L +D + +SRL
Sbjct: 3232 RYYLRNLSL-----DGQSYSLILQGLSIVAALDFDRV-------ESRL------------ 3267
Query: 183 RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 242
+W D G IER+ ++G+N+ TII+ I G
Sbjct: 3268 --------------------------YWIDAGRR-VIERMFLNGTNKETIINNDIPAGEG 3300
Query: 243 LTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMD 302
L +D R++Y+ DS D ++ L+ + FRK K+ +D
Sbjct: 3301 LAVDWIGRKIYWLDSYKDCLNVADLDGR--------FRK-------------KLIDRCID 3339
Query: 303 GSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
+N Q A+ + + G +Y WTDW + P I R GMDG N++ I
Sbjct: 3340 ANNTFCF---QYPRAIVVHPKKGYVY-----------WTDWADKPFIGRAGMDGKNKTVI 3385
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
ISTKI WPNGLT+D +Y+AD+ L++I++ + DG R V +L F + DN
Sbjct: 3386 ISTKIEWPNGLTIDYTNDMLYWADAHLNYIEYSDLDGRHRHTVYDGNLPHPFAITVFEDN 3445
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 165/387 (42%), Gaps = 97/387 (25%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTC-HPTPLGALCTCPPGEILS 62
CV L VCD DC + +DE GC+ + +C + C + + G +C+C PG S
Sbjct: 3966 CVPLHYVCDDYDDCGDHSDEA-GCNRGTQRSCSENICEHNCTNLSEGGFICSCRPGYKAS 4024
Query: 63 -NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK-AINHSAAFLII 120
+D +C+D+NECE C Q C N+KGSY C C EGY D + A + L++
Sbjct: 4025 ESDRNSCEDINECELYRKCPQDCKNSKGSYECFCAEGYRSVGDQQGTQCAAEGTPPLLLL 4084
Query: 121 SNRHSILVADL-EEKGKDHRAQDIVVSGLD------------------------------ 149
+ I +L E+ D+ V LD
Sbjct: 4085 PDNVRIRRYNLSSEQYSDYIEDQQHVQALDYDWDPEGIGLSVVYYSIRGQGSTFGSIRRA 4144
Query: 150 -----------LVEGLAYD-------------WIGGHIYWLDSRLNRIEVCDENGTNRIV 185
LV+ + D W+G HIYW D+ NRIEV +G R
Sbjct: 4145 YLPTFEDYGNNLVKDVDLDLRYIGNPDGLAVDWVGRHIYWTDAGTNRIEVAKLDGRYRKW 4204
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
L I QP ++++P G +++WTDWG P+IE MDG R ++S + WP GLT+
Sbjct: 4205 LIYTQIDQPAAIVVNPELG--FMYWTDWGRQPKIECAWMDGQQRQVLVSEDLGWPTGLTI 4262
Query: 246 D-IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
D I R+Y++DSK + I+ IK DG+
Sbjct: 4263 DYINKNRIYWSDSKENIIE----SIKP------------------------------DGT 4288
Query: 305 NASILVSGQLYEALALDLENGMLYYST 331
+ +++G L +LD+ G LY++T
Sbjct: 4289 DRQTVITGDLGNPYSLDVFEGHLYWTT 4315
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 105/220 (47%), Gaps = 50/220 (22%)
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
V S L +G+A+DWI +Y+ D I NG++R V+A+ + +PR +MLDP
Sbjct: 2487 VASDLGAPDGIAFDWIHKRVYYSDYLNQTINSMAVNGSDRTVIAR--VQRPRAIMLDPCR 2544
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +++WTDWG N +IER + G+ R+ I++T + WPNGLTLD R+Y+AD+ L
Sbjct: 2545 G--YMYWTDWGTNAKIERATLGGNFRTAIVNTSLVWPNGLTLDYEEERLYWADANLQ--- 2599
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
KI + ++ G+N ++VS +Y A+ L
Sbjct: 2600 -------------------------------KIERCSLTGTNREVVVSTAVY-PFAMTLY 2627
Query: 324 NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+ +Y WTDW DGS++ +I
Sbjct: 2628 DQHIY-----------WTDWNTRSIYRANKHDGSDQIIMI 2656
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 106/235 (45%), Gaps = 51/235 (21%)
Query: 77 PGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTC--------------------KAINHSA 115
P C Q+C +G + CSC G+ + DN TC +A +HS
Sbjct: 2052 PDACQQLCFPKPQGQFSCSCATGFKINADNRTCSPYSSFIVVSMLTAIKGFSLEAADHSE 2111
Query: 116 AFLIISNR-HSILVADL-------------------------EEKGKDHRAQDIVVSGLD 149
A + ++ R + L D+ + G R G +
Sbjct: 2112 AMVPMAGRGRNALHVDVHMPSGYIYWCDFSSTPGANNGIRRVKPNGSSFRNIVTGGIGRN 2171
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
+ G+A DW+ G++Y+ ++ L IEV N + R VL K + PR +++DP R+
Sbjct: 2172 GIRGIAVDWVAGNLYFTNAFLTETFIEVLRLNTSYRRVLMKTTVDMPRHIVVDPK--NRY 2229
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+FW D+G++P+IER +D +NR+ ++S I P GL +D VY+ D LD I
Sbjct: 2230 IFWADYGQSPKIERAFLDCTNRTVLVSEGIVTPRGLAVDRTNGYVYWVDDSLDMI 2284
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 81/142 (57%), Gaps = 5/142 (3%)
Query: 124 HSILVADLEEKGK-DHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
+S V D+ K K D ++I+ + ++ VE LAYDWI ++YW D R I V
Sbjct: 783 YSDTVKDMIYKQKTDGTGKEILTANRVEGVEDLAYDWISKNLYWTDPRYRSISVMKLADK 842
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
+R + + N+ PR +++ P G ++FWTDW +I R DGS+ I+++ + WPN
Sbjct: 843 SRRAIIQ-NLNNPRSIVVHPVIG--YIFWTDWYRPAKIMRAWCDGSHLQPIVNSSLGWPN 899
Query: 242 GLTLDIATRRVYFADSKLDFID 263
GL +D ++ R+Y+ D+ D ++
Sbjct: 900 GLAMDWSSLRLYWVDAFFDKVE 921
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 38/228 (16%)
Query: 202 SPGTRWLFWTD----WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVYFA 255
S GTR + TD + I + +D N S + + LD + RVYF
Sbjct: 2403 SDGTRCVISTDDYLIFALEGSIRSLLLDPENHSPPFPPVNVFRTAVALDYDSLDNRVYFT 2462
Query: 256 DS------KLDFIDCKS-----------LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGK 298
S ++ + S L + + I +++Y+ D + I
Sbjct: 2463 QSSGAGRSRISYFSLSSPSGPRTTVASDLGAPDGIAFDWIHKRVYYSDY----LNQTINS 2518
Query: 299 ANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSN 358
++GS+ +++ Q A+ LD C +++WTDWG N +IER + G+
Sbjct: 2519 MAVNGSDRTVIARVQRPRAIMLD-----------PCRGYMYWTDWGTNAKIERATLGGNF 2567
Query: 359 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
R+ I++T + WPNGLTLD R+Y+AD+ L I+ C+ GT R+ V+
Sbjct: 2568 RTAIVNTSLVWPNGLTLDYEEERLYWADANLQKIERCSLTGTNREVVV 2615
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 41/222 (18%)
Query: 213 WGENP-RIERIGMDGSNRSTIISTKIY-WPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DG+NR+ I P GL LD + +Y+ + + I+ L +
Sbjct: 1820 WIENPGEIHRVKSDGTNRTVFAPAAIIGAPVGLALDWISGNLYYTNPRTQSIEVIKLRGE 1879
Query: 271 TNVNYSTIFR--------------------KLYWIDEG-GNGVPLKIGKANMDGSNASIL 309
+ I K+YW D+G G P K+ A+MDGSN S+L
Sbjct: 1880 VKHRKTLITNDGTQTGAGAPIGIAVDPARGKMYWTDQGIDGGTPAKVASADMDGSNPSVL 1939
Query: 310 VSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 367
+ L E + +D LY WT G IER MDG+NR T+++ +
Sbjct: 1940 FTNNLDHIEFITIDTAEQKLY-----------WTVTGTG-MIERGNMDGTNRVTVVN-HL 1986
Query: 368 YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
P G+ + A +Y++D + I+ + TG +V++ D
Sbjct: 1987 SHPWGIAIHEAF--LYYSDRDYEVIERVD-KSTGANKVVMRD 2025
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 31/187 (16%)
Query: 242 GLTLDIATRRVYFADSKLDFI-----DCKSLEIKT--------NVNYSTIFRKLYWIDEG 288
G+ D ++++D+ D I D EI T ++ Y I + LYW D
Sbjct: 771 GIDFDAQDNAIFYSDTVKDMIYKQKTDGTGKEILTANRVEGVEDLAYDWISKNLYWTDPR 830
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN--GMLYYSTLKCTRWLFWTDWGEN 346
+ + + ++ + A+ +L N ++ + + ++FWTDW
Sbjct: 831 YRSISV-------------MKLADKSRRAIIQNLNNPRSIVVHPVIG---YIFWTDWYRP 874
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I R DGS+ I+++ + WPNGL +D ++ R+Y+ D+ D ++ +DG RQ +
Sbjct: 875 AKIMRAWCDGSHLQPIVNSSLGWPNGLAMDWSSLRLYWVDAFFDKVEHSTFDGLDRQTLN 934
Query: 407 LIDLMVE 413
I M
Sbjct: 935 RITQMTH 941
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 127/323 (39%), Gaps = 81/323 (25%)
Query: 37 FGLCSNTCHPTPLGAL---CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYIC 93
F CS+ C + +G C CP G L +DSV CQ E+P + S I
Sbjct: 1732 FNPCSHICLLSSIGPKFYSCACPSGWTLVSDSVNCQRD---EKP-----FLVVVRDSII- 1782
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD-------LEEKGKDHRAQD---- 142
G L D+ T A+ A I N + + D +E G+ HR +
Sbjct: 1783 ---FGMSLNPDDKTNDAMVPVAG---IRNGYDVDFDDSEQMIYWIENPGEIHRVKSDGTN 1836
Query: 143 -IVVSGLDLVE---GLAYDWIGGHIYWLDSRLNRIEVCDENG--TNRIVLAKDNITQ--- 193
V + ++ GLA DWI G++Y+ + R IEV G +R L ++ TQ
Sbjct: 1837 RTVFAPAAIIGAPVGLALDWISGNLYYTNPRTQSIEVIKLRGEVKHRKTLITNDGTQTGA 1896
Query: 194 --PRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
P G+ +DP+ G ++WTD G + ++ MDGSN S + + + +T+D
Sbjct: 1897 GAPIGIAVDPARGK--MYWTDQGIDGGTPAKVASADMDGSNPSVLFTNNLDHIEFITIDT 1954
Query: 248 ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307
A +KLYW G I + NMDG+N
Sbjct: 1955 AE------------------------------QKLYWTVTGTG----MIERGNMDGTN-R 1979
Query: 308 ILVSGQLYEALALDLENGMLYYS 330
+ V L + + LYYS
Sbjct: 1980 VTVVNHLSHPWGIAIHEAFLYYS 2002
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 24/162 (14%)
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
NG L IG ++ G N+ ILV +A+ G+ ++ L R +FWTD +N ++
Sbjct: 426 NGRDLLIG--DIHGGNSRILVQSH-NRGVAV----GVDFHFQL---RRVFWTDTVQN-KV 474
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
+ +DGSN +++ I P L +D + ++Y ++ + ID + DG R +I D
Sbjct: 475 FSVDIDGSNVREVLNISIETPENLAVDWVSNKIYVVETSIKRIDMVDLDGQNRITLIAED 534
Query: 410 LMVEFTNDLMGDNGVP-ALALDLENGMLYYSTEGAEFLKTPL 450
L G P +ALD G L++S G+ ++ L
Sbjct: 535 L------------GNPRGIALDPSVGYLFFSDWGSNSEESKL 564
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 87/213 (40%), Gaps = 48/213 (22%)
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRK----- 281
S T +++ + P+G+ D +RVY++D I+ ++ + + R
Sbjct: 2481 SGPRTTVASDLGAPDGIAFDWIHKRVYYSDYLNQTINSMAVNGSDRTVIARVQRPRAIML 2540
Query: 282 ------LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLK 333
+YW D G N KI +A + G+ + +V+ L L LD E LY
Sbjct: 2541 DPCRGYMYWTDWGTNA---KIERATLGGNFRTAIVNTSLVWPNGLTLDYEEERLY----- 2592
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL--------DIATRRVYFA 385
W D +IER + G+NR ++ST +Y P +TL D TR +Y A
Sbjct: 2593 ------WAD-ANLQKIERCSLTGTNREVVVSTAVY-PFAMTLYDQHIYWTDWNTRSIYRA 2644
Query: 386 DSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ G Q+I+I + + D+
Sbjct: 2645 NKH-----------DGSDQIIMIQNLPQRPMDI 2666
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 135 GKDHRAQDIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
G D + + +++S ++ GL D+ +YW D+ LN IE D +G +R + N+
Sbjct: 3376 GMDGKNKTVIISTKIEWPNGLTIDYTNDMLYWADAHLNYIEYSDLDGRHRHTVYDGNLPH 3435
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST 235
P + + ++WTDW + DGS R+ + +T
Sbjct: 3436 PFAITVFEDN----IYWTDWNTRTVEKGNKYDGSGRTMLANT 3473
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
IV + L GL D+ +YW D+ L +IE C GTNR V+ + P M L
Sbjct: 2571 IVNTSLVWPNGLTLDYEEERLYWADANLQKIERCSLTGTNREVVVSTAV-YPFAMTL--- 2626
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
+ ++WTDW DGS++ +I
Sbjct: 2627 -YDQHIYWTDWNTRSIYRANKHDGSDQIIMI 2656
>gi|339248623|ref|XP_003373299.1| putative Low-density lipoprotein receptor domain class A [Trichinella
spiralis]
gi|316970626|gb|EFV54529.1| putative Low-density lipoprotein receptor domain class A [Trichinella
spiralis]
Length = 4939
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 132/298 (44%), Positives = 174/298 (58%), Gaps = 40/298 (13%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ L KVCDGK DCPNG DEGPGC L C CS CH P G+ C CP GE L +D
Sbjct: 1660 CLPLDKVCDGKADCPNGDDEGPGCTLNSCISGQRYCSYQCHAGPDGSFCICPRGEALIDD 1719
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S+ C D+NEC CSQ+C NTKGSYICSC++ Y L D TCKAI L +SNR+
Sbjct: 1720 SI-CADVNECNDHASCSQLCENTKGSYICSCDKQYELRSDKQTCKAIGKEPMRLYVSNRY 1778
Query: 125 SIL--VADLEEKGKDHRAQDIVVS------------------------------------ 146
I +AD+++ A D ++
Sbjct: 1779 RIYWSLADMQDWSTFGAAVDNAIALAWDSVEQRIYWSDFKSKAIYYATLNGMNKTVFLDT 1838
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGT 205
GLD+ EGLA DW+G ++YW+D +L +EV + + +R VL N+++PRG+ LDP G
Sbjct: 1839 GLDVTEGLAVDWVGRNLYWVDGKLQTLEVANLDPPHHRSVLISKNMSRPRGLALDPRDGI 1898
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
R +FW+DWG P+I R MDGS+ + I+ KIYWPNGL LD+ T+R+YF+DSKLD+I+
Sbjct: 1899 RLMFWSDWGMKPKISRASMDGSDPTVILDVKIYWPNGLALDLPTKRLYFSDSKLDYIE 1956
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/308 (32%), Positives = 154/308 (50%), Gaps = 52/308 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKF-GLCSNTCHPTPLGALCTCPPGEILSN 63
C+ KVC+G+ DC +G+DE C + ECK LC + C P+G C C PG L
Sbjct: 3447 CIPEEKVCNGRADCEDGSDESSLCGINECKSAAKALCEHKCVDKPIGYECQCLPGFRLDQ 3506
Query: 64 -DSVTCQDMNECE-QPGYCSQMCTNTKGSYICSCNEGYV-LEYDNHTCKAINHSA-AFLI 119
D +C D+NECE CSQ C N GS+ C+CNE Y + D+ +CK I+ S FL+
Sbjct: 3507 GDKKSCIDINECEIDLPPCSQYCINKIGSFKCACNETYYEVAADSQSCKRIDESVEPFLL 3566
Query: 120 ISNRHSIL------------------VADLEEKGKDHR---------------------- 139
++NR+ I +A L+ K+ +
Sbjct: 3567 LANRYYIRKISMDGQNVRLVAMGFENIASLDYDYKEQKIYFADIGRQRIYRLPISQQEPE 3626
Query: 140 -----AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
A++++ + VEGLA DW+G +Y+L+ + VC+ +G VL D TQP
Sbjct: 3627 TAVQNAEEVMRHTVFGVEGLALDWVGRKLYFLNRLERTLRVCELDGRYSQVLLADRFTQP 3686
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
R ++ P G +LF+T+W +P + RIGMDG++ ++ I WPN +T+D T R+++
Sbjct: 3687 RALVAYPKKG--YLFFTEWSLSPYVARIGMDGTDFVKLVERDIVWPNAITVDYFTERIFW 3744
Query: 255 ADSKLDFI 262
D+ + I
Sbjct: 3745 GDAHFNEI 3752
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 141/310 (45%), Gaps = 60/310 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EILS 62
C+ L+ +CD DC NGADE C + C CS C +P G +C CP G +
Sbjct: 566 HCIPLSNLCDSHNDCANGADEK-NCSRSLCSAL--SCSFVCRASPDGGVCDCPSGYRVNQ 622
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEG---YVLEYDNHTCKAINHSAAFLI 119
+ C+D++EC++ GYC Q C N + Y C C VL+ C++ ++ + L+
Sbjct: 623 QNRRNCEDVDECKEYGYCDQKCFNAEPGYHCECYSDCFELVLKSGRGYCRSRDYQSMRLL 682
Query: 120 ISNR--------------------------------------------HSILVA--DLEE 133
++ R H + A D +E
Sbjct: 683 VARREGLYLVNPYEAPDQKALRLVGGKFIYGVDFDYESRKVFWVERETHEVFEATLDHDE 742
Query: 134 KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
+ K+HR + + L +A DWI +Y ++S RI+V + G R VL D++T
Sbjct: 743 ELKNHRK--LPLRHLVQPRNIAVDWITKKLYIVESGSRRIDVSNFAGDRRTVLLIDDLTL 800
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
P + LDP+ G +F+T+ ++ER MDG NR I+S Y + LD+ +RRVY
Sbjct: 801 PVDVALDPTRGI--MFFTN---EKKLERAAMDGRNRQVIVSNHTYQITSVALDLISRRVY 855
Query: 254 FADSKLDFID 263
+ D K+D I+
Sbjct: 856 WCDPKIDLIE 865
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 178/447 (39%), Gaps = 90/447 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++ + VCD DC +G+DE C C + C N C P + +
Sbjct: 3364 HCIHNSWVCDHDNDCLDGSDEPENCTYTSCSASYFQCRNK----------KCIPSQWV-- 3411
Query: 64 DSVTCQDMNECEQPGYCSQMCTNT------KGSYICSCNEGYVLEYDN-----HTCKAIN 112
C N+C Y + CT+T KG Y C++G + + C+ +
Sbjct: 3412 ----CDGHNDCGD-NYDEENCTHTGDAGCMKGQY--ECHDGTCIPEEKVCNGRADCEDGS 3464
Query: 113 HSAAFLIISNRHSILVADLEEKGKDHRA--QDIVVSGLDLVEGLAYDWIGGHIYWLDSRL 170
++ I+ S A E K D + + G L +G I + +D
Sbjct: 3465 DESSLCGINECKSAAKALCEHKCVDKPIGYECQCLPGFRLDQGDKKSCIDINECEID--- 3521
Query: 171 NRIEVCDENGTNRI------------VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPR 218
+ C + N+I +A D+ + R +D S L +
Sbjct: 3522 --LPPCSQYCINKIGSFKCACNETYYEVAADSQSCKR---IDESVEPFLLLANRY----Y 3572
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD---SKLDFIDCKSLEIKTNVNY 275
I +I MDG N +++ L D +++YFAD ++ + E +T V
Sbjct: 3573 IRKISMDGQN-VRLVAMGFENIASLDYDYKEQKIYFADIGRQRIYRLPISQQEPETAVQN 3631
Query: 276 S------TIF-----------RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
+ T+F RKLY++ N + + +DG + +L++ + +
Sbjct: 3632 AEEVMRHTVFGVEGLALDWVGRKLYFL----NRLERTLRVCELDGRYSQVLLADRFTQPR 3687
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 378
AL + Y +LF+T+W +P + RIGMDG++ ++ I WPN +T+D
Sbjct: 3688 AL------VAYPK---KGYLFFTEWSLSPYVARIGMDGTDFVKLVERDIVWPNAITVDYF 3738
Query: 379 TRRVYFADSKLDFIDFCNYDGTGRQQV 405
T R+++ D+ + I + + DG+ + +
Sbjct: 3739 TERIFWGDAHFNEIWYMDMDGSRIEHI 3765
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 109/470 (23%), Positives = 186/470 (39%), Gaps = 104/470 (22%)
Query: 5 CVNLTKVCDGKTDCPNG--ADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ T+VCDG DC + +DEG +C + C +C PP ++
Sbjct: 4232 CLSFTRVCDGSYDCGDFDVSDEG-----IQCHNPTFQCDENAFKCATAGICI-PPEKVCD 4285
Query: 63 N--------DSVTCQDMNECEQ-PGYCSQMCTNTKGSYICSCNEGY-----VLEYDNHTC 108
+ D C ++EC CSQ+C N KGSY C C + Y + + C
Sbjct: 4286 HVDDCGDRSDEDGCH-IDECATFNNTCSQICVNRKGSYDCLCAKNYTSAIHIGDMLGKDC 4344
Query: 109 KAINHSA-AFLIISNRHSIL----VADLEEKGKDHRAQDIVVSGLDLVEGLAY--DWIGG 161
+A A FL SN ++L +L K D A I+ + V+ L Y D + G
Sbjct: 4345 RAEGDPADLFLATSNSVNMLEISRQRNLYSKSIDAEAGMIIDVDYNPVKRLMYWIDDVNG 4404
Query: 162 HIYWLDSRLNRIEVCDE--NGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRI 219
I+W + I V ++ NG + V N + ++ + T DW
Sbjct: 4405 QIWW-----SSIPVGNQTHNGASLDVDFLINTAEDHSILGPMNSLTPLALAVDW------ 4453
Query: 220 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIF 279
++ +Y G D+ R D++ S +K + +
Sbjct: 4454 -------------VTGNLYISAG--DDVVAR---------DYVTAASRRMKRSTSNKETT 4489
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSG--QLYEALALDLENGMLYYSTLKCTRW 337
+ +P I DG +V+ Q+ ++ALD E G LY +
Sbjct: 4490 SSM---------LPGHIFVTREDGHYRKTIVNTGFQIPISIALDPELGQLYVA------- 4533
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR-RVYFADSKLDFIDFCN 396
D G+ P IE + +DGS R ++++ ++ P LT+D A + R+++A KL I+
Sbjct: 4534 ----DTGDKPVIEALSLDGSVRKVLVNSMLFSPRSLTIDYAKQHRIFWASPKLGRIESVL 4589
Query: 397 YDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFL 446
DG+ R ++ + A ++DL +Y+ST+ + +
Sbjct: 4590 PDGSDRV--------------VVSSDAHHAYSIDLFENWIYWSTKDSPHV 4625
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 11/113 (9%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
VE + DW+ IYW R R+ D +G + +V+A+ + G LDP G ++FW
Sbjct: 2800 VEDMKLDWVTQKIYWTTGRTGRLYSIDTDGQHIVVVARGDWLAALG--LDPCKG--YVFW 2855
Query: 211 TDWG-------ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+D G PRIER M G+NR I++T+I + +++D + +YF+D
Sbjct: 2856 SDTGFKAKGGAYQPRIERATMAGTNRRVIVNTEISLVSVMSVDTEKQTLYFSD 2908
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 32/181 (17%)
Query: 234 STKIYWPNGLTLDIATRRVYFA--DSKLDFIDCKSLEIK-----TNVNYSTIFRKLYWID 286
S K++W ++ T V+ A D + + + L ++ N+ I +KLY ++
Sbjct: 720 SRKVFW-----VERETHEVFEATLDHDEELKNHRKLPLRHLVQPRNIAVDWITKKLYIVE 774
Query: 287 EGGNGVPLKIGKANMDGSNASILVSGQLYEAL--ALDLENGMLYYSTLKCTRWLFWTDWG 344
G +I +N G ++L+ L + ALD G+++++ K
Sbjct: 775 SGSR----RIDVSNFAGDRRTVLLIDDLTLPVDVALDPTRGIMFFTNEK----------- 819
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
++ER MDG NR I+S Y + LD+ +RRVY+ D K+D I+ YDGT R+
Sbjct: 820 ---KLERAAMDGRNRQVIVSNHTYQITSVALDLISRRVYWCDPKIDLIETILYDGTDRRV 876
Query: 405 V 405
+
Sbjct: 877 I 877
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 67/123 (54%), Gaps = 5/123 (4%)
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYW--LDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
D++V L V+ LA DWI ++Y+ + S +EV +G R++L R +++
Sbjct: 2492 DMLVGSLS-VQSLAVDWINYNLYFTSIASEETNVEVVRLDGQYRMILFSSKTEFMRSIVV 2550
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP R+++ G+ P I++ +D S R ++S + P L +D+ T +Y+ADS++
Sbjct: 2551 DPL--QRFVYVVCRGQRPNIQQANLDFSGRKVLVSHNVIEPRDLVVDMNTHHIYWADSRM 2608
Query: 260 DFI 262
D I
Sbjct: 2609 DMI 2611
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 140/340 (41%), Gaps = 51/340 (15%)
Query: 63 NDSVTCQDMNECE-QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI 119
++++ Q N C QP CS +C T + C C G+ L+ C I FL+
Sbjct: 2026 HEALQPQAENSCRGQP--CSHICLLTTRAPGFSCQCPVGFKLDSTYRNC--IVEDKPFLM 2081
Query: 120 ISNRHSILVADLEEK-GKDHRAQDIVVSG------LDLVEGLAYDWIGGHIYWLDSRLNR 172
+ +++I L E + AQ I + G L V L +D + +Y++ + +
Sbjct: 2082 VVKQNAIHGYSLHEIIMSNGSAQQIELGGMIPFSSLQNVRDLDFDELSFSMYYVQLPV-K 2140
Query: 173 IEVCDENGTNRIVLAKDNITQPRGMMLDPS--PGTRWLFWTDW-GENPRIERIGMDGSNR 229
++ T + + + + + P+ P + DW G N I G+
Sbjct: 2141 DKILVARLTRKAFVYRSLMDGSNNTIFLPNSRPADAYCLAYDWLGRNLYI------GNKE 2194
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
S+ I + N I DS+ K + ++ + L+W+DEGG
Sbjct: 2195 SSTIEVVQTFGNKYRTIILNNN----DSE------KGVVFPVSIALHPVMGLLFWLDEGG 2244
Query: 290 NGVPLKIGKANMDGSNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
V K+ +A MDGSN +++VS L + L +DL+ MLY+S E
Sbjct: 2245 PSVARKLARAEMDGSNPTVIVSSDLARLDFLTIDLDAQMLYFSQ------------SERG 2292
Query: 348 RIERIGMDGSNRSTII-STKIYWPNGLTLDIATRRVYFAD 386
IER +G+ R I S +Y P GL +++FAD
Sbjct: 2293 VIERCDYNGAGRVAIFDSGGLYQPLGLQF--FDNQLFFAD 2330
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 46/218 (21%)
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV---NYSTIFRKLYWIDEGGNGV 292
K++ +D +R+Y F+D + E ++V + +K+YW G
Sbjct: 2769 KMFGLKRFEVDANFKRIYA------FVDADAQEKFSSVEDMKLDWVTQKIYWT----TGR 2818
Query: 293 PLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWG-------E 345
++ + DG + ++ G AL LD C ++FW+D G
Sbjct: 2819 TGRLYSIDTDGQHIVVVARGDWLAALGLD-----------PCKGYVFWSDTGFKAKGGAY 2867
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
PRIER M G+NR I++T+I + +++D + +YF+D I+ +YDG R +V
Sbjct: 2868 QPRIERATMAGTNRRVIVNTEISLVSVMSVDTEKQTLYFSDLNRLKIERVDYDGRNR-RV 2926
Query: 406 ILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGA 443
IL D+ A LDL LY++ A
Sbjct: 2927 ILEDIR--------------ATGLDLYKNWLYFTDSSA 2950
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 136/385 (35%), Gaps = 113/385 (29%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI-VLAKDNITQPRGMML-- 199
IV S L ++ L D +Y+ S IE CD NG R+ + + QP G+
Sbjct: 2264 IVSSDLARLDFLTIDLDAQMLYFSQSERGVIERCDYNGAGRVAIFDSGGLYQPLGLQFFD 2323
Query: 200 ------DPSPGTRWLFWTDWGENPRIERIGMDGS--------NRSTIISTKIYWPN---- 241
DP+ G + +G P DG N++ I+S +IY
Sbjct: 2324 NQLFFADPAHGAVF-----YGNVPLTAEGNYDGQMKVKKLLDNQNDIVSIRIYHSRPFVQ 2378
Query: 242 ----------------------------GLTLDIATRRVYFADSKLDFIDCKS---LEIK 270
G +D T + DS L + L+
Sbjct: 2379 HVCQTKNGDCEHLCIPVKSRFRKCVCQIGYQMDTVTGQCKGFDSFLMATTSREIYGLQFD 2438
Query: 271 TNVNYSTI---------------FRKLYWIDEGGNGVPLKIGKANMDGSN----ASILVS 311
TN N++ R +++ D G+ I + ++G +LV
Sbjct: 2439 TNKNFAMTPISGTKLISVGAEVRTRNVFFADVAGSR--RGISRTTVNGGEIKPVVDMLVG 2496
Query: 312 GQLYEALALDLENGMLYYSTLKC----------------------------------TRW 337
++LA+D N LY++++ R+
Sbjct: 2497 SLSVQSLAVDWINYNLYFTSIASEETNVEVVRLDGQYRMILFSSKTEFMRSIVVDPLQRF 2556
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
++ G+ P I++ +D S R ++S + P L +D+ T +Y+ADS++D I
Sbjct: 2557 VYVVCRGQRPNIQQANLDFSGRKVLVSHNVIEPRDLVVDMNTHHIYWADSRMDMIQRVKP 2616
Query: 398 DGTGRQQVILIDLMVEFTNDLMGDN 422
G G +Q+I +L + ++G N
Sbjct: 2617 SG-GDRQIIRRNLPNPYGIAIVGRN 2640
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 126/310 (40%), Gaps = 52/310 (16%)
Query: 47 TPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYD-- 104
TP G +C C G++ +ND TC+ + S+ + I G VL+ +
Sbjct: 980 TP-GHVCACEIGQVSTNDVRTCEPV---------SEFLLFSSNKVI----RGIVLDREVF 1025
Query: 105 NHTCKAINHSAAFL--------IISNRHSILVADLEE----KGKDHRAQD--IVVSGLDL 150
N+ + + + A L R I AD+ E K + + +QD ++V+ D
Sbjct: 1026 NNAIQPVTPNGARLSGLFYDVGCDVRRQWIFYADIMENIIYKMRPNGSQDTTVLVNHNDG 1085
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
+ YDWI IY++D+ N ++V N + P +++ P G ++F+
Sbjct: 1086 LVSFTYDWISQLIYYVDNIRNTLDVVHSELRNTHRTLVRQLRAPTSVVVHPGKG--FIFY 1143
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC------ 264
+ +I + D S + + P GL +D + +ADS L I C
Sbjct: 1144 AEARRPAKITKCTSDASLCLVYRNISLGRPGGLVIDFDRDELCWADSALKHIHCGNMLGS 1203
Query: 265 --KSLEIKTN---VNYSTIFRKLYWIDEGGNGVPLKIGKAN-MDGSNASILVS----GQL 314
+++EI + + LY+I + P I K N + G +++L S G L
Sbjct: 1204 KIRAIEISPRPIPQALAILGNDLYFI----HSQPSSIRKVNKITGGQSTVLQSFSSLGNL 1259
Query: 315 YEALALDLEN 324
Y A L N
Sbjct: 1260 YGLKACSLLN 1269
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 291 GVPLKIGKANMDGSNASILVS-GQLYEALAL---DLENGMLYYSTLK---CTRWLFWTDW 343
G L IG N + S ++ + G Y + L D E G+++ ++ LFW D
Sbjct: 2185 GRNLYIG--NKESSTIEVVQTFGNKYRTIILNNNDSEKGVVFPVSIALHPVMGLLFWLDE 2242
Query: 344 GENP---RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
G ++ R MDGSN + I+S+ + + LT+D+ + +YF+ S+ I+ C+Y+G
Sbjct: 2243 GGPSVARKLARAEMDGSNPTVIVSSDLARLDFLTIDLDAQMLYFSQSERGVIERCDYNGA 2302
Query: 401 GRQQVI 406
GR +
Sbjct: 2303 GRVAIF 2308
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 15/128 (11%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLN--------RIEVCDENGTNRIVLAKDNITQP 194
+VV+ D + L D G+++W D+ RIE GTNR V+ I+
Sbjct: 2833 VVVARGDWLAALGLDPCKGYVFWSDTGFKAKGGAYQPRIERATMAGTNRRVIVNTEISLV 2892
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
M +D T L+++D +IER+ DG NR I+ LD+ +YF
Sbjct: 2893 SVMSVDTEKQT--LYFSDLNR-LKIERVDYDGRNRRVILEDI----RATGLDLYKNWLYF 2945
Query: 255 ADSKLDFI 262
DS + I
Sbjct: 2946 TDSSANGI 2953
>gi|344239540|gb|EGV95643.1| Low-density lipoprotein receptor-related protein 2 [Cricetulus
griseus]
Length = 4664
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 170/542 (31%), Positives = 252/542 (46%), Gaps = 120/542 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+NL+ +CDG DCPNG DE P C+ C H G C++ C P GA C CP G L+ND
Sbjct: 1622 CINLSALCDGNFDCPNGTDESPLCNQDSCLHYNGGCTHQCVQGPFGATCVCPSGYQLAND 1681
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
+ TC+D++EC+ PG+CSQ C N +G++ C+C+ Y LE D TCK + L I++R
Sbjct: 1682 TKTCEDIDECDSPGFCSQHCVNMRGTFRCTCDPEYTLEGDRRTCKVTASESLLLAIASRD 1741
Query: 125 SILV----------------------------------ADLE--------EKGKDHRAQD 142
I+V +DL+ + G D R
Sbjct: 1742 KIIVDNITAHMHNIYSLVQDVSFVVALDFDSVTGRVFWSDLQQGKTWSVFQNGTDQRV-- 1799
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ SGL + E +A DWIG ++YW D L IEV +G++R VL N++ PRG+ LDP
Sbjct: 1800 VHDSGLSVTETVAVDWIGRNLYWTDYALETIEVSKIDGSHRTVLISKNVSNPRGLALDPR 1859
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +FW+DWG +PRIER MDG+ R+ I+ KIYWP GL++D R +YF D+ LD+I
Sbjct: 1860 IGNHLMFWSDWGRHPRIERASMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYI 1919
Query: 263 D------------CKSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANM-DGSNASI 308
+ S + + + T+F +YW D ++ +AN G N SI
Sbjct: 1920 EFCDYDGHSRRQVIASDLVLRHPHALTLFEDSVYWTDRATR----RVMQANKWHGGNQSI 1975
Query: 309 L----------------------------VSGQLYEALALDLE----NGMLYYSTLKCTR 336
+ V + + LD E + M+ + ++
Sbjct: 1976 VMYSINQPLGIIAIHPSRQPSCEQPFLMSVRNSVIFGIPLDPEVKSNDAMVPIAGIQNGF 2035
Query: 337 WLFWTD------WGENP-RIERIGMDGSNRSTIISTKIYWPN-GLTLDIATRRVYFADSK 388
+ + D W ENP I R+ DGSNR+ + + GL LD +R +Y+ S
Sbjct: 2036 DVEFDDSEQFIYWVENPGEIHRVKTDGSNRTVFAPLSLLGSSYGLALDWVSRNLYYTTSA 2095
Query: 389 LDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVP-------ALALDLENGMLYYSTE 441
I+ G R + L+ ++G P ++ALD G LY+S +
Sbjct: 2096 SRSIEVVTLQGDTR-----------YGKTLIANDGTPLGVGFPMSIALDPVRGKLYWSDQ 2144
Query: 442 GA 443
G
Sbjct: 2145 GT 2146
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 171/338 (50%), Gaps = 59/338 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS- 62
+C+N VCDG+ DC + DE GC C C CH TP G C CPP I++
Sbjct: 622 QCINQNWVCDGEDDCQDSGDED-GCGTGICS--VLNCEYQCHQTPYGGECFCPPSHIINV 678
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
NDS TC D ++C+ G C Q C N +G + C C EGY+LE H + S A +I SN
Sbjct: 679 NDSRTCIDFDDCQIWGTCDQKCENRQGRHQCLCEEGYILERGQHCKANSSFSVASIIFSN 738
Query: 123 RHSILVADL---------EEKGKDH-------------------------------RAQD 142
+L+ DL E K + Q+
Sbjct: 739 GRDLLIGDLHGRNFQILVESKNRGQAMGVDFHYQKRRVFWTDPVQDKVFSTDINGLNTQE 798
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ ++ E LA DWI +Y +++++NRI++ + +G+ RI L +N+ +PRG+ +DP+
Sbjct: 799 ILNVSVEAPENLAVDWINNKLYLVETKVNRIDMVNLDGSQRITLITENLGRPRGIAVDPT 858
Query: 203 PGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +LF++DW P++ER MDGSNR ++ TK+ WP G+TLD+ ++RVY+ DS+
Sbjct: 859 VG--YLFFSDWASLSGQPKVERAFMDGSNRKDLVKTKVGWPAGITLDLVSKRVYWVDSRY 916
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
D+I+ V Y + R + GG+ VP G
Sbjct: 917 DYIE--------TVTYDGVQRMT--VARGGSLVPHPFG 944
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/369 (34%), Positives = 173/369 (46%), Gaps = 69/369 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + KVC+ DC + +DE GC + EC+ C + C T C+C PG L
Sbjct: 3219 HCIEMGKVCNHVDDCLDNSDE-KGCGINECQDTSISRCDHNCTDTITSFYCSCLPGYKLM 3277
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P CSQ C N GSYIC C GY+ E D TC+ ++ +LI S
Sbjct: 3278 SDKRTCVDIDECKESPQLCSQKCENVVGSYICKCAPGYIREPDGKTCRQNSNIEPYLIFS 3337
Query: 122 NRHSI----------------------LVADLEEK-----------------GKDHRAQD 142
NR+ + L D EK K +R +
Sbjct: 3338 NRYYLRNLTTDGVLYSLILQGLGNAVALDFDRVEKRLYWIDTDKKIIERMFLNKTNR-ET 3396
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQP 194
I+ L E LA DW+ +YWLD+ L+ + V D G NR +LA+ + P
Sbjct: 3397 IISHRLLRAESLAVDWVSRKLYWLDATLDCLFVSDLEGRNRKMLAQHCVDANNTFCFRNP 3456
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
RG++L P G ++W DWG I R GMDG+N S IISTKI WPN +T+D +Y+
Sbjct: 3457 RGIVLHPKNGH--VYWADWGSRAFIARTGMDGTNMSVIISTKITWPNAITIDYTNDLLYW 3514
Query: 255 ADSKLDFIDCKSLE-IKTNVNYS---------TIFR-KLYWIDEGGNGVPLKIGKAN-MD 302
AD+ L +I+ LE + Y TIF +YW D V K N D
Sbjct: 3515 ADAHLGYIEFSDLEGHHRHTVYDGTLPHPYAITIFEDTVYWTDWNTRTVE----KGNKYD 3570
Query: 303 GSNASILVS 311
GSN +LV+
Sbjct: 3571 GSNRVVLVN 3579
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 131/276 (47%), Gaps = 21/276 (7%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C++ VCD DC + +DE GC++ EC+ +FG+C +C + C C G +
Sbjct: 4033 CISQHYVCDNVDDCGDLSDES-GCNINECE-QFGICPQSCRNSKGSYECLCADGFKSMDS 4090
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT--------CKAINHSAA 116
+ + + P + + S LE + H + I
Sbjct: 4091 HFGERCAADGDPPLLLLPENVRIRKYNVSSEKFSEYLEEEEHIQTIDYDWDPEGIGLGVV 4150
Query: 117 FLIISNRHS-------ILVADLEEKGKDH-RAQDIVVSGLDLVEGLAYDWIGGHIYWLDS 168
+ + + S + D E + R D+ + + +GLA DW+G HIYW D+
Sbjct: 4151 YYTVLGQGSEFGAIKRAYIPDFESGSNNPIREVDLGLKYIMQPDGLAVDWVGRHIYWSDA 4210
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ RIEV +G R L ++ QP ++++P G +FWTD G+ P+IE M+G +
Sbjct: 4211 KSQRIEVATLDGRYRKWLITTDLDQPGAIVVNPKLGL--MFWTDQGKQPKIESAWMNGEH 4268
Query: 229 RSTIISTKIYWPNGLTLD-IATRRVYFADSKLDFID 263
RS ++S + WPNGL++D + R+Y++DSK D I+
Sbjct: 4269 RSVLVSEDLGWPNGLSIDYLNDDRIYWSDSKEDVIE 4304
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 114/456 (25%), Positives = 172/456 (37%), Gaps = 77/456 (16%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V C++ + VCD + DC +GADE C C + CSN C P E
Sbjct: 503 VEGTCISRSWVCDQEKDCSDGADEHQNCAGTTCSSQQMACSNG----------QCIPREY 552
Query: 61 LSNDSVTCQDMNE--------CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN 112
+ C D ++ C+Q + C NT S C D C
Sbjct: 553 RCDHVSDCSDGSDERNCYYPTCDQLTCANGACYNT--SQKCDQKVDCRDASDEANCTYDT 610
Query: 113 HSAAFLIISNRHSI---LVADLEEKGKDHRAQDIVVSGLDLVEGLAYDW----IGGHIYW 165
SN I V D E+ +D +D +G+ V Y GG +
Sbjct: 611 CGGHHFTCSNGQCINQNWVCDGEDDCQDSGDEDGCGTGICSVLNCEYQCHQTPYGGECFC 670
Query: 166 LDSRLNRIE---------------VCDENGTNR----IVLAKDNITQPRGMMLDPSPGTR 206
S + + CD+ NR L ++ RG +
Sbjct: 671 PPSHIINVNDSRTCIDFDDCQIWGTCDQKCENRQGRHQCLCEEGYILERGQHC--KANSS 728
Query: 207 WLFWTDWGENPRIERIG-MDGSNRSTIISTKIY-WPNGLTLDIATRRVYFADSKLDFIDC 264
+ + N R IG + G N ++ +K G+ RRV++ D D +
Sbjct: 729 FSVASIIFSNGRDLLIGDLHGRNFQILVESKNRGQAMGVDFHYQKRRVFWTDPVQDKVFS 788
Query: 265 K-------------SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
S+E N+ I KLY ++ N +I N+DGS L++
Sbjct: 789 TDINGLNTQEILNVSVEAPENLAVDWINNKLYLVETKVN----RIDMVNLDGSQRITLIT 844
Query: 312 GQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYW 369
L +A+D G L++S W P++ER MDGSNR ++ TK+ W
Sbjct: 845 ENLGRPRGIAVDPTVGYLFFSD--------WASLSGQPKVERAFMDGSNRKDLVKTKVGW 896
Query: 370 PNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
P G+TLD+ ++RVY+ DS+ D+I+ YDG R V
Sbjct: 897 PAGITLDLVSKRVYWVDSRYDYIETVTYDGVQRMTV 932
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 100/174 (57%), Gaps = 19/174 (10%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+++S + +++G+A+DWI IY+ D I E+G+NR V+A ++ +PR ++LDP
Sbjct: 2634 VLLSDIGIIDGIAFDWINRRIYYSDYSNQTINSVAEDGSNRAVIA--HVPKPRAIVLDPC 2691
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWG N +IER + G+ R I++T + WPNGLTLD+ T +Y+AD+ I
Sbjct: 2692 RG--YMYWTDWGTNAKIERATLAGNFRVPIVNTSLVWPNGLTLDLETDLLYWADASRQKI 2749
Query: 263 DCKSLE-IKTNVNYSTIF---------RKLYWIDEGGNGVPLKIGKAN-MDGSN 305
+ SL V ST F + +YW D KI +AN DGS+
Sbjct: 2750 ERSSLTGTNREVIVSTAFNSFGLTVYGQYIYWTDY----FTRKIYRANKYDGSD 2799
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
G + + G+A DW+ G++Y+ ++ ++ IEV N T R VL K ++ PR +++DP
Sbjct: 2317 GANGIRGIAVDWVAGNLYFTNAFVSETLIEVLRINTTYRRVLLKVSVDMPRHIVVDPK-- 2374
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
+R+LFW D+G+ P+IER +D +NR+ ++S I P GL +D +T +Y+ D LD I
Sbjct: 2375 SRYLFWADYGQKPKIERSFLDCTNRTVLVSEGIVTPRGLAMDHSTGYIYWVDDSLDIIAR 2434
Query: 265 KSLE------IKTNVNYSTIF------RKLYWID-----------EGGNGVPLKIGKANM 301
L+ ++ Y T + + W+D E GN P ++ + N+
Sbjct: 2435 IHLDGGESQVVRYGSRYPTPYGITVFGESIIWVDRNLKKIFQASKEPGNTDPPEVIRDNI 2494
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLF 339
+ + A +L N S C+ + F
Sbjct: 2495 NLLRDVTIFDEHAQPLSAAELNNNPCLQSNGGCSHFCF 2532
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 126/280 (45%), Gaps = 67/280 (23%)
Query: 150 LVEGLAYDW----IGGHIYWLDSRLNRIEVCDE-NGTNRIVLAKDNITQPRGM------- 197
LV LA+ W G +Y+ D + IE D+ +G+N+++L +DNI RG+
Sbjct: 2210 LVHHLAHPWGLALHGPFLYYSDEQYEVIERVDKFSGSNKVIL-RDNIPNLRGLRVYHRRR 2268
Query: 198 ----MLDPSPGTRWLFWTDWGENPR----IERIGMDGSNRSTIISTKIYWP--NGLTLDI 247
+D + +++W D+ + R I RI DGSN + I++ I G+ +D
Sbjct: 2269 RNVLHVDVDVASGFIYWCDFSNSARFSNGIRRIKPDGSNFTNIVTYGIGANGIRGIAVDW 2328
Query: 248 ATRRVYFADSKLDFIDCKSLEI-KTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
+YF ++ F+ +E+ + N Y + K
Sbjct: 2329 VAGNLYFTNA---FVSETLIEVLRINTTYRRVLLK------------------------- 2360
Query: 307 SILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 366
VS + + +D + +R+LFW D+G+ P+IER +D +NR+ ++S
Sbjct: 2361 ---VSVDMPRHIVVDPK-----------SRYLFWADYGQKPKIERSFLDCTNRTVLVSEG 2406
Query: 367 IYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I P GL +D +T +Y+ D LD I + DG G QV+
Sbjct: 2407 IVTPRGLAMDHSTGYIYWVDDSLDIIARIHLDG-GESQVV 2445
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 19/148 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ R +YW D +I A +DG L++ L + A+ ++ + G++
Sbjct: 4201 VGRHIYWSDAKSQ----RIEVATLDGRYRKWLITTDLDQPGAIVVNPKLGLM-------- 4248
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDF 394
FWTD G+ P+IE M+G +RS ++S + WPNGL++D + R+Y++DSK D I+
Sbjct: 4249 ---FWTDQGKQPKIESAWMNGEHRSVLVSEDLGWPNGLSIDYLNDDRIYWSDSKEDVIET 4305
Query: 395 CNYDGTGRQQVILIDLMVEFTNDLMGDN 422
YDGT R ++IL + M F+ D+ D
Sbjct: 4306 IKYDGTDR-RLILNEAMKPFSLDIFEDQ 4332
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 100/224 (44%), Gaps = 45/224 (20%)
Query: 213 WGENP-RIERIGMDGSNRSTIISTKIYWPN-GLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DGSNR+ + + GL LD +R +Y+ S I+ +L+
Sbjct: 2048 WVENPGEIHRVKTDGSNRTVFAPLSLLGSSYGLALDWVSRNLYYTTSASRSIEVVTLQGD 2107
Query: 271 TNVNYSTIFR--------------------KLYWIDEGGN-GVPLKIGKANMDGSNASIL 309
T + I KLYW D+G N GVP KI ANMDG++ IL
Sbjct: 2108 TRYGKTLIANDGTPLGVGFPMSIALDPVRGKLYWSDQGTNSGVPAKIASANMDGTSLKIL 2167
Query: 310 VSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPR--IERIGMDGSNRSTIIST 365
+G L E + LD++ LY W R IER +DG+ R I+
Sbjct: 2168 FTGNLEHLEVVTLDIQAQKLY--------------WAVTSRGVIERGNVDGTER-IILVH 2212
Query: 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
+ P GL L +Y++D + + I+ + +G +VIL D
Sbjct: 2213 HLAHPWGLALHGPF--LYYSDEQYEVIERVD-KFSGSNKVILRD 2253
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 15/134 (11%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+ + I R++Y+ D I DGSN +++ A+ LD
Sbjct: 2645 IAFDWINRRIYYSDYSNQ----TINSVAEDGSNRAVIAHVPKPRAIVLD----------- 2689
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
C +++WTDWG N +IER + G+ R I++T + WPNGLTLD+ T +Y+AD+ I
Sbjct: 2690 PCRGYMYWTDWGTNAKIERATLAGNFRVPIVNTSLVWPNGLTLDLETDLLYWADASRQKI 2749
Query: 393 DFCNYDGTGRQQVI 406
+ + GT R+ ++
Sbjct: 2750 ERSSLTGTNREVIV 2763
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 169/447 (37%), Gaps = 117/447 (26%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
RC+ ++C+G DC +G DE + C H C G +S
Sbjct: 3988 RCIYGHQLCNGVDDCGDGTDE-----------REEHCRKPTHKPCTQTEYKCGNGNCISQ 4036
Query: 64 DSVT-----CQDM--------NECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH---T 107
V C D+ NECEQ G C Q C N+KGSY C C +G+ D+H
Sbjct: 4037 HYVCDNVDDCGDLSDESGCNINECEQFGICPQSCRNSKGSYECLCADGFK-SMDSHFGER 4095
Query: 108 CKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD 167
C A L+ N EK ++ ++ + +D YDW
Sbjct: 4096 CAADGDPPLLLLPENVRIRKYNVSSEKFSEYLEEEEHIQTID------YDW--------- 4140
Query: 168 SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGM--- 224
P G+ G +++T G+ I
Sbjct: 4141 -------------------------DPEGI------GLGVVYYTVLGQGSEFGAIKRAYI 4169
Query: 225 ----DGSN---RSTIISTK-IYWPNGLTLDIATRRVYFADSKLDFIDCKSLE-------I 269
GSN R + K I P+GL +D R +Y++D+K I+ +L+ I
Sbjct: 4170 PDFESGSNNPIREVDLGLKYIMQPDGLAVDWVGRHIYWSDAKSQRIEVATLDGRYRKWLI 4229
Query: 270 KTNVNYS---TIFRKL---YWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALD 321
T+++ + KL +W D+G KI A M+G + S+LVS L L++D
Sbjct: 4230 TTDLDQPGAIVVNPKLGLMFWTDQGKQP---KIESAWMNGEHRSVLVSEDLGWPNGLSID 4286
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 381
N Y W+D E+ IE I DG++R I++ + +LDI +
Sbjct: 4287 YLNDDRIY----------WSDSKED-VIETIKYDGTDRRLILNEAM---KPFSLDIFEDQ 4332
Query: 382 VYFADSKLDFIDFCNYDGTGRQQVILI 408
+Y+ + + N G G ++ +L+
Sbjct: 4333 LYWVAKEKGEVWRQNKFGKGNKEKVLV 4359
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 130/337 (38%), Gaps = 77/337 (22%)
Query: 131 LEEKGKDHRAQD-----IVVSGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
+E G+ HR + V + L L+ GLA DW+ ++Y+ S IEV G
Sbjct: 2049 VENPGEIHRVKTDGSNRTVFAPLSLLGSSYGLALDWVSRNLYYTTSASRSIEVVTLQGDT 2108
Query: 183 R---IVLAKD----NITQPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRST 231
R ++A D + P + LDP G L+W+D G N +I MDG++
Sbjct: 2109 RYGKTLIANDGTPLGVGFPMSIALDPVRGK--LYWSDQGTNSGVPAKIASANMDGTSLKI 2166
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+ + + +TLDI +++Y+A + I+
Sbjct: 2167 LFTGNLEHLEVVTLDIQAQKLYWAVTSRGVIE---------------------------- 2198
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
+ N+DG+ ILV L L L LYYS + IER
Sbjct: 2199 ------RGNVDGTERIILVH-HLAHPWGLALHGPFLYYSD------------EQYEVIER 2239
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF---ADSKLDFIDFCNYDGTGRQQVILI 408
+ + I+ I GL + RR D FI +C++ + R +
Sbjct: 2240 VDKFSGSNKVILRDNIPNLRGLRVYHRRRRNVLHVDVDVASGFIYWCDFSNSARFSNGIR 2299
Query: 409 DLMVE---FTNDL---MGDNGVPALALDLENGMLYYS 439
+ + FTN + +G NG+ +A+D G LY++
Sbjct: 2300 RIKPDGSNFTNIVTYGIGANGIRGIAVDWVAGNLYFT 2336
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 82/213 (38%), Gaps = 44/213 (20%)
Query: 74 CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF----------LIISNR 123
CEQ S N Y C C G+ L+ D C A+ + F +S +
Sbjct: 1008 CEQVCVLSHRTDNGGLGYRCKCEFGFELDTDERHCVAVRNFLLFSSKTAVRGIPFTLSTQ 1067
Query: 124 HSILVADLEE----KGKDHRAQDIVVSGLDL-------------------------VEGL 154
++V G D AQ + D+ VE L
Sbjct: 1068 EDVMVPITGSPSYFSGIDFDAQSSTIFFSDIAKDIIYKQKIDGTGKEVLAANRLGNVESL 1127
Query: 155 AYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
+DWI ++YW D L + V + + R +++ N+ PR +++ P+ G L+W D
Sbjct: 1128 TFDWISRNLYWTDGGLKSVSVMKLADKSRRQIIS--NLNNPRSIVVHPTAGASRLYWVDA 1185
Query: 214 GENPRIERIGMDGSNRSTIIST-KIYWPNGLTL 245
+ +IE DG +R + ++ P GLT+
Sbjct: 1186 FFD-KIEHSTFDGLDRKRLGHIDQMTHPFGLTI 1217
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 125/335 (37%), Gaps = 79/335 (23%)
Query: 72 NECEQP-GYCSQMCTNTK--GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILV 128
N C Q G CS C + C+C G LE D +C FLI + +S+
Sbjct: 2518 NPCLQSNGGCSHFCFALPELSTPKCACAFG-ALENDGKSCATSRED--FLIYALNNSLRS 2574
Query: 129 ADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE-----VCDENGTNR 183
+ + Q++ V + L YD I++ +LN + V +GT+
Sbjct: 2575 LHFDPQDHSPPFQEMNVGRTAI--ALDYDRRNNRIFFT-QKLNSVSGQISYVSLYSGTSS 2631
Query: 184 IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
++ +I G+ D R ++++D+ N I + DGSNR+ I + P +
Sbjct: 2632 PIVLLSDIGIIDGIAFDWI--NRRIYYSDYS-NQTINSVAEDGSNRAVI--AHVPKPRAI 2686
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
LD R Y +YW D G N KI +A + G
Sbjct: 2687 VLDPC--RGY----------------------------MYWTDWGTNA---KIERATLAG 2713
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+ +V+ L NG+ L+W D +IER + G+NR I+
Sbjct: 2714 NFRVPIVNTSLV------WPNGLTLDLETD---LLYWAD-ASRQKIERSSLTGTNREVIV 2763
Query: 364 STK------------IYWPNGLTLDIATRRVYFAD 386
ST IYW D TR++Y A+
Sbjct: 2764 STAFNSFGLTVYGQYIYW-----TDYFTRKIYRAN 2793
>gi|348519841|ref|XP_003447438.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 2-like [Oreochromis niloticus]
Length = 4657
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 135/304 (44%), Positives = 173/304 (56%), Gaps = 45/304 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-----DLAECKHKFGLCSNTCHPTPLGALCTCPPGE 59
C+NLT VCD DCPNGADE P C D C C++ C P GA CTCP G
Sbjct: 1298 CINLTTVCDNTPDCPNGADESPLCNEPLPDQESCSDNNAGCTHGCIQGPFGAQCTCPVGY 1357
Query: 60 ILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI 119
LSNDS TC+D++EC PG CSQ C N +GS+ C C +GY LE D TCKA + AFL+
Sbjct: 1358 QLSNDSKTCEDIDECNPPGLCSQHCFNERGSFRCHCQDGYTLEADQRTCKASDSRQAFLL 1417
Query: 120 ISNRHSILVADLEEKG-------KDHR-------------------AQD----------- 142
+++R+ I+ D+ + +D R +QD
Sbjct: 1418 VASRNQIVQDDITTQPNVVRSLVRDGRNIVALDFDSVTERVYWSDTSQDRIWSAHKNGSD 1477
Query: 143 ---IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
I SG+ + E LA DW+G ++YW D L IEV +GT+R VL +N+T PRG++L
Sbjct: 1478 RVVIFDSGVTVTESLAVDWVGRNLYWTDYVLETIEVSKLDGTHRTVLVSENVTNPRGLVL 1537
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP +FWTDWG NPRIER MDG R+ IIS+K+YWPNGLT+D +YFAD+ L
Sbjct: 1538 DPRDSAHLMFWTDWGRNPRIERASMDGKQRTVIISSKLYWPNGLTIDYPNNLLYFADAYL 1597
Query: 260 DFID 263
DFID
Sbjct: 1598 DFID 1601
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 196/409 (47%), Gaps = 95/409 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L++VCD DC + +DE GC + EC C + C TP +CTC PG L
Sbjct: 3088 HCISLSQVCDRSDDCSDNSDEK-GCGINECTDPSIHHCDHNCTDTPTSFICTCRPGYRLM 3146
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P CSQ+C NT GS++C C+ G++ E D +C+ ++ + +LI S
Sbjct: 3147 SDGKTCDDVDECTETPSVCSQLCENTVGSHMCKCSPGFLREPDGRSCRQNSNISPYLIFS 3206
Query: 122 NRH--------------------SILVADLEEKGK-----------------DHRAQDIV 144
NR+ S++ D + K + +++V
Sbjct: 3207 NRYYLRNLSTDGAAYSLILQGLTSVVATDFDRVDKRLYWIDVSRRVIERMYNNGSNREVV 3266
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPRG 196
V+G+ EGLA DW+ +YW+DS L+ ++V + +G LA+ + PRG
Sbjct: 3267 VNGVLHGEGLAVDWVARKLYWVDSFLDCLKVSELDGRFVKKLAEHCVDANNTYCFENPRG 3326
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
++L P G +++WTDWG+ I R+GMDG+N+S II+TKI WPNG+T+D R+Y++D
Sbjct: 3327 IVLHPKYG--FVYWTDWGDKAFIGRVGMDGTNKSAIITTKIEWPNGITIDYTNDRLYWSD 3384
Query: 257 SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE 316
+ L++I+ +++DG + + G L
Sbjct: 3385 AHLNYIE----------------------------------YSDLDGQHRHTVYDGDLPH 3410
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
AL + +Y WTDW + DGS R +++T
Sbjct: 3411 PFALTVFEDTVY-----------WTDWNTRTVEKGNKYDGSGRQVLVNT 3448
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/376 (31%), Positives = 186/376 (49%), Gaps = 64/376 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGE 59
C+ L K+CDG +CP+G DE G C + C C + CH +P G C+CP G
Sbjct: 251 CIPLDKLCDGMPNCPDGEDETNTTAGRNCSIWRCASL--SCEHHCHASPDGGTCSCPSGY 308
Query: 60 IL-SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL 118
I+ SN+S TC D ++C G C Q+C + GS+ CSC EGY+LE + + L
Sbjct: 309 IVNSNNSRTCIDFDDCSMWGVCDQLCEDRIGSHRCSCREGYILEQHRYCRADSSTGVPSL 368
Query: 119 IISNRHSILVADL-----------EEKG-----------------------------KDH 138
I SN +L+ D+ + +G
Sbjct: 369 IFSNGRDLLIGDIHGNNLRTLVNSQNRGIAVGVDFHYSLNMIFWTDTIQNKVFSVDMAGS 428
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
Q ++ +D E LA DW+ +Y +++ +NRI++ D +G+NR+ L +N+ PRG+
Sbjct: 429 NMQVVLNVSVDYPENLAVDWVNNKLYVVEASVNRIDMVDFDGSNRVTLITENLGNPRGLA 488
Query: 199 LDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+DP+ G ++F++DW P +ER MDG+NR IIS+K+ WP G+TLDI +RVY+
Sbjct: 489 VDPTVG--YMFFSDWESLNGQPGLERAFMDGTNRYGIISSKLGWPAGITLDIEAKRVYWV 546
Query: 256 DSKLDFIDCKS---LEIKTNVNYSTIFRKLYWIDEGGNGV------PLKIGKAN--MDGS 304
DS+ D+I+ + L KT V+ T+ + I + V + + KAN D S
Sbjct: 547 DSRYDYIETATYDGLHRKTVVHGGTVIPHPFGISLFEHNVYFTDWTKMAVMKANKFTDSS 606
Query: 305 NASILVSGQLYEALAL 320
+ + + Q +A+
Sbjct: 607 SEVVYRTSQTPHGVAV 622
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 168/422 (39%), Gaps = 129/422 (30%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-------GPGCDLAECKHKFGLCSNTCHPTPLGALCTCP 56
+C+ L CD DC + +DE G C C+H N T G LC+C
Sbjct: 3940 QCIPLQYACDDYDDCGDQSDELGCHQTSGHSCSANICEH------NCTDLTGGGFLCSCR 3993
Query: 57 PG-EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH--TCKAINH 113
PG + S + C+D+NECE G C Q C NTKGSY C C +G++ + H C A +
Sbjct: 3994 PGYKPKSTERHNCEDVNECEVYGTCPQDCKNTKGSYECFCADGFLSFGEPHGTECAAQGN 4053
Query: 114 SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLV-----EGLAYDWIGGHIYWL-- 166
L+ N E+ D+ + LD + +GL+ +YW
Sbjct: 4054 PPVMLLPDNVRIRRYNLSSEQYSDYVDNTEHIQALDYLWDPDGQGLSI------VYWTVL 4107
Query: 167 ------------------DSRLNRIEVCDEN------------------------GTNRI 184
D+ N ++ D N GTNRI
Sbjct: 4108 GRGSQFGSIKRAYMTTFNDNGNNPVKEVDLNLRYIANPDGIAVDWVGRHIYWTDAGTNRI 4167
Query: 185 VLAK-----------DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
+AK ++ QP ++++PS G ++WTDWG NPRIE MDG +R ++
Sbjct: 4168 EVAKLDGRYRKWLIHTDLDQPAAIVVNPSLGM--MYWTDWGRNPRIESAWMDGQHRQVLV 4225
Query: 234 STK-IYWPNGLTLD-IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+ + WP GLT+D + R+Y+ DSK + I+
Sbjct: 4226 QKEDLGWPTGLTVDYLNGNRIYWCDSKENIIE---------------------------- 4257
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
DG++ I++SG + +LD+ G +Y++T D GE RI +
Sbjct: 4258 ------SMKPDGTDRRIVISGDIGHPYSLDVFEGHVYWTT---------KDKGEVWRINK 4302
Query: 352 IG 353
G
Sbjct: 4303 FG 4304
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 114/245 (46%), Gaps = 51/245 (20%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V S L +G+AYDWI IY+ D I +G R ++A ++++PR +MLDP
Sbjct: 2442 VVASDLGAPDGIAYDWINRRIYYSDYVNQSISSMSVDGFQRTIIA--HVSRPRAIMLDPC 2499
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWG + +IER + G+ R I+++ + WPNGLTLD R+Y+AD+ L
Sbjct: 2500 RG--YMYWTDWGTHAKIERATLGGNFRIEIVNSSLVWPNGLTLDYEEERLYWADASLQ-- 2555
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
KI ++++ GSN ++VS +Y
Sbjct: 2556 --------------------------------KIERSSLTGSNREVIVSTAIYP------ 2577
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
++ ++++WTDW DGS++ +I P + + +A R+
Sbjct: 2578 ------FAMTMFGQFIYWTDWNTRSIYRANKHDGSDQRVMIQNLPSRPMDIHV-LAGRKQ 2630
Query: 383 YFADS 387
DS
Sbjct: 2631 QQCDS 2635
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 111/234 (47%), Gaps = 51/234 (21%)
Query: 78 GYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCK---------AINHSAAFLIISNRHSIL 127
G C Q+C S + C+C G+ + DN TC ++ F + + HS
Sbjct: 2005 GACEQLCLPRPQSLFTCACATGFKVNADNRTCSPYQSYVVISTLSAIKGFSLEGSDHSEA 2064
Query: 128 VADLEEKGKD------HRA-----------------------------QDIVVSGL--DL 150
+ + +G++ H A + IV SG+ +
Sbjct: 2065 MVPVAGRGRNALHIDVHMASGFIYWCDFSSTVAIQNGVRRIKPDGSGLRSIVTSGIGRNG 2124
Query: 151 VEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
+ G+A DW+ G++Y+ ++ L +EV N T R VL K + PR +++DP R+L
Sbjct: 2125 IRGIAVDWVAGNLYFTNAFLTETYVEVLHLNTTFRRVLLKTQVDMPRHIIVDPR--NRYL 2182
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
FW D+G+NP+IER +DG+NR+ ++S+ I P GL LD T VY+ D LD I
Sbjct: 2183 FWADYGQNPKIERALLDGTNRTVLVSSGIITPRGLALDFQTGYVYWVDDSLDMI 2236
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 110/251 (43%), Gaps = 48/251 (19%)
Query: 70 DMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI--L 127
D CEQ S N Y C C GY L D C A+ FL+ S++ +I +
Sbjct: 638 DRGGCEQICVLSHRSDNGGLGYRCKCRMGYDLHADGKRCLAVRQ---FLLFSSQLAIRGI 694
Query: 128 VADLEEK---------------GKDHRAQD-------------------------IVVSG 147
+L + G D A+D + +
Sbjct: 695 PFNLSTQEDIILPVTGSPSYFVGVDFSAEDDAIFFSDTAKDIIYKQKVDGTGREVLAANR 754
Query: 148 LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
+D VE LAYDWI ++YW D R I V +R + + N+ PR +++ P G +
Sbjct: 755 VDGVEDLAYDWISKNLYWTDPRYRSISVMKLADKSRRAIIR-NLNNPRAIVVHPLIG--Y 811
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
+FWTDW +I R DGS+ +I++T + WPNGL +D ++ R+Y+ D+ D I+ +
Sbjct: 812 IFWTDWYRPAKIMRAWGDGSHALSIVNTTLGWPNGLAIDWSSMRLYWVDAFFDKIEHSNF 871
Query: 268 EIKTNVNYSTI 278
+ + ++ I
Sbjct: 872 DGRNRLSLDRI 882
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 115/463 (24%), Positives = 182/463 (39%), Gaps = 89/463 (19%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEIL 61
+RC+ ++C+ DC +G+DE C K G C++ + G C P +
Sbjct: 3895 NRCIYSHELCNSVDDCGDGSDE----RQENCQKPTHGPCTDDEYKCSNGQ---CIPLQYA 3947
Query: 62 SNDSVTCQDMNE---CEQ-------PGYCSQMCTN-TKGSYICSCNEGYVLEY-DNHTCK 109
+D C D ++ C Q C CT+ T G ++CSC GY + + H C+
Sbjct: 3948 CDDYDDCGDQSDELGCHQTSGHSCSANICEHNCTDLTGGGFLCSCRPGYKPKSTERHNCE 4007
Query: 110 AINHSAAFLIISN-------RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGH 162
+N + + AD + + G V L D +
Sbjct: 4008 DVNECEVYGTCPQDCKNTKGSYECFCADGFLSFGEPHGTECAAQGNPPVM-LLPDNVRIR 4066
Query: 163 IYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI 222
Y L S + D + A D + P G G ++WT G +
Sbjct: 4067 RYNLSSE----QYSDYVDNTEHIQALDYLWDPDGQ------GLSIVYWTVLGRGSQF--- 4113
Query: 223 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
GS + ++T N ++ Y A+ +D + R +
Sbjct: 4114 ---GSIKRAYMTTFNDNGNNPVKEVDLNLRYIANPDGIAVD-------------WVGRHI 4157
Query: 283 YWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFW 340
YW D G N +I A +DG L+ L + A+ ++ GM+Y W
Sbjct: 4158 YWTDAGTN----RIEVAKLDGRYRKWLIHTDLDQPAAIVVNPSLGMMY-----------W 4202
Query: 341 TDWGENPRIERIGMDGSNRSTIISTK-IYWPNGLTLD-IATRRVYFADSKLDFIDFCNYD 398
TDWG NPRIE MDG +R ++ + + WP GLT+D + R+Y+ DSK + I+ D
Sbjct: 4203 TDWGRNPRIESAWMDGQHRQVLVQKEDLGWPTGLTVDYLNGNRIYWCDSKENIIESMKPD 4262
Query: 399 GTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTE 441
GT R+ VI GD G P +LD+ G +Y++T+
Sbjct: 4263 GTDRRIVI------------SGDIGHP-YSLDVFEGHVYWTTK 4292
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 90/196 (45%), Gaps = 33/196 (16%)
Query: 242 GLTLDIATRRVYF------ADSKLDFIDCKS-----------LEIKTNVNYSTIFRKLYW 284
L DI RRVYF SK+ +I S L + Y I R++Y+
Sbjct: 2405 ALDFDIVDRRVYFTQSSGAGSSKISYISLSSPISAPVVVASDLGAPDGIAYDWINRRIYY 2464
Query: 285 IDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWG 344
D V I ++DG +I+ A+ LD C +++WTDWG
Sbjct: 2465 SDY----VNQSISSMSVDGFQRTIIAHVSRPRAIMLD-----------PCRGYMYWTDWG 2509
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
+ +IER + G+ R I+++ + WPNGLTLD R+Y+AD+ L I+ + G+ R +
Sbjct: 2510 THAKIERATLGGNFRIEIVNSSLVWPNGLTLDYEEERLYWADASLQKIERSSLTGSNR-E 2568
Query: 405 VILIDLMVEFTNDLMG 420
VI+ + F + G
Sbjct: 2569 VIVSTAIYPFAMTMFG 2584
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 95/224 (42%), Gaps = 45/224 (20%)
Query: 213 WGENP-RIERIGMDGSNRSTIISTKIYW-PNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W E+P I R+ DG+NR+ I P GL LD T +Y+ + I + L+++
Sbjct: 1772 WVEHPGEIHRVKSDGTNRTEFAPAAILGSPVGLALDWITENLYYTNPATQSI--EVLKLR 1829
Query: 271 TNVNYSTIF----------------------RKLYWIDEGG-NGVPLKIGKANMDGSNAS 307
V Y KLYW D+G +G+P K+ A+MDG N
Sbjct: 1830 GEVQYRKTLITNNGSPTGAGSPVGIAVDPARGKLYWTDQGTESGIPAKVASADMDGLNPV 1889
Query: 308 ILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
L + L E + +D+ LY++ IER DGSNR TI+ T
Sbjct: 1890 TLFTNNLDHIEFITVDIRENKLYWAVTS------------TGVIERGDPDGSNRITIV-T 1936
Query: 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
+ P G+ + +Y+ D + I+ + TG +V++ D
Sbjct: 1937 GLSHPWGVA--VYQNYLYYTDRNFEVIERVD-KSTGANKVVMRD 1977
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
++FWTDW +I R DGS+ +I++T + WPNGL +D ++ R+Y+ D+ D I+ N
Sbjct: 811 YIFWTDWYRPAKIMRAWGDGSHALSIVNTTLGWPNGLAIDWSSMRLYWVDAFFDKIEHSN 870
Query: 397 YDGTGR 402
+DG R
Sbjct: 871 FDGRNR 876
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 137/344 (39%), Gaps = 59/344 (17%)
Query: 131 LEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLAK 188
+E D + + +++S L GL D+ +Y+ D+ L+ I+ CD NG NR VLA
Sbjct: 1557 IERASMDGKQRTVIISSKLYWPNGLTIDYPNNLLYFADAYLDFIDYCDYNGNNRKQVLAS 1616
Query: 189 DNITQ-PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
D + Q P + + +++WTD N + G N+ T++ + P GL + +
Sbjct: 1617 DLVLQHPHAITI----FEDFVYWTDRYINRVMRAHKWHGENQ-TVMLFNLPQPMGL-VAV 1670
Query: 248 ATRRVYFADSKLDFIDCKSLEIKTNV--NYSTIFRKLYWIDEGG---------------- 289
R ++ C + + + V Y + W+
Sbjct: 1671 HPARQPAGENHCLRSSCTHICLLSAVGPRYYSCACPSGWMLAADQITCTRVEDPFLVVVR 1730
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP-R 348
+ + I D SN +++ L +D ++ + ++W E+P
Sbjct: 1731 DSIIYGISLNPNDKSNDAMVPVAGLQNGYDVDFDDN---------EQTIYWV---EHPGE 1778
Query: 349 IERIGMDGSNRSTIISTKIYW-PNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
I R+ DG+NR+ I P GL LD T +Y+ + I +V+
Sbjct: 1779 IHRVKSDGTNRTEFAPAAILGSPVGLALDWITENLYYTNPATQSI-----------EVLK 1827
Query: 408 IDLMVEFTNDLMGDNGVP-------ALALDLENGMLYYSTEGAE 444
+ V++ L+ +NG P +A+D G LY++ +G E
Sbjct: 1828 LRGEVQYRKTLITNNGSPTGAGSPVGIAVDPARGKLYWTDQGTE 1871
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 87/226 (38%), Gaps = 57/226 (25%)
Query: 91 YICSCNEGYVLEYDNHTCKAINHSAAFLII----------------SNRHSILVADL--- 131
Y C+C G++L D TC + FL++ SN + VA L
Sbjct: 1701 YSCACPSGWMLAADQITCTRVED--PFLVVVRDSIIYGISLNPNDKSNDAMVPVAGLQNG 1758
Query: 132 ---------------EEKGKDHRAQDIVVSGLDLVE--------GLAYDWIGGHIYWLDS 168
E G+ HR + + + GLA DWI ++Y+ +
Sbjct: 1759 YDVDFDDNEQTIYWVEHPGEIHRVKSDGTNRTEFAPAAILGSPVGLALDWITENLYYTNP 1818
Query: 169 RLNRIEVCDENG--TNRIVLAKDNIT-----QPRGMMLDPSPGTRWLFWTDWGEN----P 217
IEV G R L +N + P G+ +DP+ G L+WTD G
Sbjct: 1819 ATQSIEVLKLRGEVQYRKTLITNNGSPTGAGSPVGIAVDPARGK--LYWTDQGTESGIPA 1876
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
++ MDG N T+ + + +T+DI ++Y+A + I+
Sbjct: 1877 KVASADMDGLNPVTLFTNNLDHIEFITVDIRENKLYWAVTSTGVIE 1922
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+IV S L GL D+ +YW D+ L +IE G+NR V+ I P M +
Sbjct: 2526 EIVNSSLVWPNGLTLDYEEERLYWADASLQKIERSSLTGSNREVIVSTAI-YPFAMTM-- 2582
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++++WTDW DGS++ +I P + + +A R+ DS
Sbjct: 2583 --FGQFIYWTDWNTRSIYRANKHDGSDQRVMIQNLPSRPMDIHV-LAGRKQQQCDS 2635
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 135 GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK-DNITQ 193
G A IV + L GLA DW +YW+D+ ++IE + +G NR+ L + I+
Sbjct: 828 GDGSHALSIVNTTLGWPNGLAIDWSSMRLYWVDAFFDKIEHSNFDGRNRLSLDRISQISH 887
Query: 194 PRGMMLDPSPGTRWLFWTDW 213
P G+ + + ++TDW
Sbjct: 888 PFGLTIFEG----YAYFTDW 903
>gi|260807227|ref|XP_002598410.1| low-density lipoprotein receptor-related protein 2 [Branchiostoma
floridae]
gi|229283683|gb|EEN54422.1| low-density lipoprotein receptor-related protein 2 [Branchiostoma
floridae]
Length = 4094
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 141/333 (42%), Positives = 192/333 (57%), Gaps = 28/333 (8%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EI 60
D C+ +VCDG DC NGADEGP C+ C G CS+ C T GA C C G ++
Sbjct: 911 VDECIPYGQVCDGTEDCSNGADEGP-CNTDVCHEGNGGCSDICVVTVFGADCECNVGRQL 969
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
+ N + C+D+NEC+ PG+CSQ+CTN +GS+ C C++GY LE D TCK + +
Sbjct: 970 VENSTKVCEDINECDPPGHCSQICTNLEGSFKCECDDGYQLEPDQRTCKV---TGKLVNT 1026
Query: 121 SNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG 180
HS V ++ K I+ SGL + EG+ DW+G ++YW D L IEV D G
Sbjct: 1027 WGGHST-VKPMDASDK------IISSGLQVPEGVVVDWVGRNLYWADYGLQTIEVSDLAG 1079
Query: 181 TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 240
TNR VL N+T PRG+++DP R +FWTDWG+NPRIER GMDGS R+TI++ K+YWP
Sbjct: 1080 TNRAVLFNQNVTYPRGLVIDPRDSYRLMFWTDWGQNPRIERAGMDGSGRTTIVTEKLYWP 1139
Query: 241 NGLTLDIATRRVYFADSKLDFID------------CKSLEIKTNVNYSTIFRKL-YWIDE 287
NGL +D T+++YFAD++LD+ID S ++ + + TIF + YW D
Sbjct: 1140 NGLAIDFPTQKLYFADARLDYIDFCNYDGTGRRQVLASNQLIQHPHSITIFEDMVYWSDR 1199
Query: 288 GGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
N V G DG+ V L+ L L
Sbjct: 1200 TANRV---YGVNKFDGTQNQTTVIRYLWGPLDL 1229
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 203/454 (44%), Gaps = 101/454 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
+C++ + VCDG+ DCP+ +DE C + EC++ C + C T C C G +L
Sbjct: 2621 QCISNSLVCDGRYDCPDNSDEF-HCGINECQNPAVSRCEHRCVDTQTSYRCVCNAGYVLM 2679
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D C D++EC + P CSQ C NT GSYIC C +GY+ E D TCK +L+ S
Sbjct: 2680 ADGKACTDIDECTDTPWVCSQGCENTPGSYICKCGDGYLREPDGFTCKHTATVEPYLVFS 2739
Query: 122 NRHSI----------------------LVADLEEKGKDHR----------------AQDI 143
NR+ I L DL+E+ + + I
Sbjct: 2740 NRYYIRNLTVDGSSYNLVKQGLTNAIALDYDLQEQRYYYSDIGANLIKRMFMNGTGEETI 2799
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT---------QP 194
+ + LVEG+A DWIG +YW D R+ ++ V + G +R + I +P
Sbjct: 2800 IDQNIPLVEGMAVDWIGRKLYWNDRRMKKMFVSELTGRSRRTHHQRCINKNGTDYCMQEP 2859
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
R + +DP ++++TDWG I RI DGS + +I+ K+ WPN LT++ AT R+++
Sbjct: 2860 RALAVDPKEA--FIYFTDWGYRAYIARISADGSQKEVLITEKVSWPNALTIEYATGRLFW 2917
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
AD+ LDFI+ N DGSN ++ G
Sbjct: 2918 ADAHLDFIE----------------------------------FCNKDGSNRHTII-GPT 2942
Query: 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
+ A L+ W++W+DW + ++G+ R+T+++T ++ P
Sbjct: 2943 ADGTAPHPFAMTLFED------WIYWSDWNTKTVEKARKLNGTERTTMVTT-VHRP---- 2991
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
+DI + ++ F++ C + G + L+
Sbjct: 2992 MDI---HIVHPQRQMPFVNPCGDNNGGCSHLCLM 3022
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 100/159 (62%), Gaps = 11/159 (6%)
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D I L++ V + R LYW D G + + +++ G+N ++L + +
Sbjct: 1040 DKIISSGLQVPEGVVVDWVGRNLYWADYGLQTIEV----SDLAGTNRAVLFNQNVTYPRG 1095
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L ++ Y R +FWTDWG+NPRIER GMDGS R+TI++ K+YWPNGL +D T
Sbjct: 1096 LVIDPRDSY-------RLMFWTDWGQNPRIERAGMDGSGRTTIVTEKLYWPNGLAIDFPT 1148
Query: 380 RRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+++YFAD++LD+IDFCNYDGTGR+QV+ + +++ + +
Sbjct: 1149 QKLYFADARLDYIDFCNYDGTGRRQVLASNQLIQHPHSI 1187
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 87/123 (70%), Gaps = 2/123 (1%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++I+ GL+ EGLA DWIG +Y ++S NRIE+C+ +GT R L ++I QPRG+ LD
Sbjct: 48 REILNIGLETPEGLAVDWIGRKLYLVESAANRIEICNLDGTMRATLVAEDIDQPRGIALD 107
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
PS G ++FW+DWG P+IER MDGSNR ++ T+I W G+TLD +RVY+AD +LD
Sbjct: 108 PSVG--YMFWSDWGSTPKIERAYMDGSNRFNLVDTRISWAAGVTLDYVNKRVYWADGRLD 165
Query: 261 FID 263
++
Sbjct: 166 VLE 168
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 166/401 (41%), Gaps = 115/401 (28%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-----DLAECKHKFGLCSNTCHPTPLGALCTCPPGE 59
CV TK+CD DC + +DE GC + EC C C G +C+C PG
Sbjct: 3394 CVASTKLCDNTDDCGDLSDER-GCNSNNEERNECTDGDHGCERNCTDILGGYVCSCGPGY 3452
Query: 60 ILSN-DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEY-DNHTCKAINHSAAF 117
+S DS +C D+NECE C Q C N KGS+ C C+ G+ LE D CKA + A F
Sbjct: 3453 TISAVDSKSCADVNECEVFSSCPQGCRNNKGSFRCVCSRGFRLEEGDVPICKAYDGEAKF 3512
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVSGLDLVEGLAYDW----------------I 159
+I S+ + + +E+G+ D+++ G + + YD+
Sbjct: 3513 VIFSDGPEMRRYYPEGDERGE---YNDLII-GERRITAIDYDYNYATMSSRKKRDASDGS 3568
Query: 160 GGHIYWLDSRLNRIEVCD-------------------------------------ENGTN 182
G +Y+ D+ I+ + GTN
Sbjct: 3569 AGLVYFSDTSAKTIKRASLPTDPAHLGITQDLGITGLSEPDGIAVDWVSGLLYWTDAGTN 3628
Query: 183 RI-----------VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRST 231
+I L +N+ +P ++++P G ++WTDWG P+IE+ ++G R
Sbjct: 3629 KIEVSMLDGRYRKTLVSNNLDRPAAIVVNPEKGM--MYWTDWGAVPKIEQAWLNGEQRRV 3686
Query: 232 IISTKIYWPNGLTLDIA-TRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN 290
++ T++ WP GLT+D RVY+ D+K + I+
Sbjct: 3687 VVGTQLGWPTGLTIDYTNNHRVYWCDAKENVIE--------------------------- 3719
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYST 331
N DG++ ++++G L LD+ G L+++T
Sbjct: 3720 -------SINWDGTDRQMVLNGGLENPFRLDVFEGELFWTT 3753
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 108/224 (48%), Gaps = 44/224 (19%)
Query: 183 RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 242
R +++ + + + +D LFW+D N +I R MDGSN+ I++ + P G
Sbjct: 2 RYIMSASSTSTSNVLGIDYHYNENLLFWSD-SINNKIFRSNMDGSNQREILNIGLETPEG 60
Query: 243 LTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMD 302
L +D I RKLY ++ N +I N+D
Sbjct: 61 LAVDW------------------------------IGRKLYLVESAAN----RIEICNLD 86
Query: 303 GSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
G+ + LV+ + + + L+ + Y +FW+DWG P+IER MDGSNR +
Sbjct: 87 GTMRATLVAEDIDQPRGIALDPSVGY---------MFWSDWGSTPKIERAYMDGSNRFNL 137
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ T+I W G+TLD +RVY+AD +LD ++ YDGT R+ ++
Sbjct: 138 VDTRISWAAGVTLDYVNKRVYWADGRLDVLETVRYDGTDRKTIV 181
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 105/234 (44%), Gaps = 53/234 (22%)
Query: 78 GYCSQMCTNTKGS------YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----- 126
G CSQMC + S Y C C GY L DN C ++ FL+ S+R+++
Sbjct: 259 GGCSQMCVLSHRSDNDGLGYRCMCQTGYELAPDNRNCTRLDK---FLLFSSRYAVRGIPL 315
Query: 127 ---------------------LVADLEEK---------------GKDHRAQDIVVSGLDL 150
+ D++E+ D ++ VV +
Sbjct: 316 DPMQSVDAMMPVLGLRSFYIGMDFDVQERMIYYSDTNQDQIYRIKTDGTGKETVVPSRAM 375
Query: 151 -VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
EGLA DW H+Y+ DS N I V R +A N+ PR +++ P G ++F
Sbjct: 376 GPEGLALDWKSKHLYFTDSVFNTINVVHLENRWRKAIASVNVGNPRAIVIAPHSG--YIF 433
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
WTDW RIER DGS R+ I++T + WPNGL++D ++Y+ D+ D I+
Sbjct: 434 WTDWSRPARIERALTDGSERTVIVNTTLGWPNGLSIDYPQLKLYWCDAFFDKIE 487
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 82/163 (50%), Gaps = 31/163 (19%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLF 339
LYW D G N KI + +DG LVS L A+ ++ E GM+Y
Sbjct: 3620 LYWTDAGTN----KIEVSMLDGRYRKTLVSNNLDRPAAIVVNPEKGMMY----------- 3664
Query: 340 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA-TRRVYFADSKLDFIDFCNYD 398
WTDWG P+IE+ ++G R ++ T++ WP GLT+D RVY+ D+K + I+ N+D
Sbjct: 3665 WTDWGAVPKIEQAWLNGEQRRVVVGTQLGWPTGLTIDYTNNHRVYWCDAKENVIESINWD 3724
Query: 399 GTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTE 441
GT RQ V+ L F LD+ G L+++T+
Sbjct: 3725 GTDRQMVLNGGLENPFR-------------LDVFEGELFWTTQ 3754
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 97/225 (43%), Gaps = 47/225 (20%)
Query: 78 GYCSQMCTNTKG-SYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G C Q+C N G S +C C G+ L D +C+A +FL++S I L
Sbjct: 1577 GDCQQLCFNKPGFSKVCGCGTGFTLASDGTSCEA---QTSFLVVSQYGVIRAVGLSSSQH 1633
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYW-------------LDSRLN------------ 171
+ + I + + L GH+++ +DSRL
Sbjct: 1634 EDAMEPI--GNTRMGQALGVQMSEGHLFFGYQNQGIWRIKPNVDSRLKIILDNGIGRQGV 1691
Query: 172 --------------RIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP 217
IEV +G+ R VL + PR + ++P R+L+WTD G+ P
Sbjct: 1692 ARYMYFINVQDLETVIEVAKTSGSYRKVLIRSVEDSPRAIAVNPI--KRYLYWTDNGQTP 1749
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ER +DGSNR+ ++ + P LT+D+AT VY+ D + D I
Sbjct: 1750 ALERSLLDGSNRTILVRNGMVQPTDLTIDMATHNVYWVDIRADSI 1794
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 90/186 (48%), Gaps = 42/186 (22%)
Query: 243 LTLDIATRRVYFADS-----KLDFID---------------CKSLEIKTNVNYSTIFRKL 282
L D A R+Y S K+ +I+ + L T + + + +K+
Sbjct: 1956 LDFDAADNRIYITQSGTEGRKISYINLNTAGGTDPVILDIITEGLRYPTAIAFDWVAKKI 2015
Query: 283 YWIDEGGNGVPLKIGKANMDGSNASILVSGQLY-EALALDLENGMLYYSTLKCTRWLFWT 341
YW D G P KI AN DGS+ +++G Y A+ALD C +L+WT
Sbjct: 2016 YWSD----GYPYKIQAANADGSSKVDILTGINYVYAIALD-----------PCRGYLYWT 2060
Query: 342 DWGENPRIERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
+G I+R M G+NR+T++S T + + GL +D ++YF+D D I+ N DG+
Sbjct: 2061 QYGG---IQRASMGGNNRTTLVSNTGLAY--GLAIDFDENKLYFSDLYGDTIERVNLDGS 2115
Query: 401 GRQQVI 406
GR+ V+
Sbjct: 2116 GRETVV 2121
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 70/130 (53%), Gaps = 9/130 (6%)
Query: 135 GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
G D DI+ GL +A+DW+ IYW D +I+ + +G++++ + I
Sbjct: 1987 GTDPVILDIITEGLRYPTAIAFDWVAKKIYWSDGYPYKIQAANADGSSKVDILT-GINYV 2045
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVY 253
+ LDP G +L+WT +G I+R M G+NR+T++S T + + GL +D ++Y
Sbjct: 2046 YAIALDPCRG--YLYWTQYGG---IQRASMGGNNRTTLVSNTGLAY--GLAIDFDENKLY 2098
Query: 254 FADSKLDFID 263
F+D D I+
Sbjct: 2099 FSDLYGDTIE 2108
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 134/324 (41%), Gaps = 67/324 (20%)
Query: 78 GYCSQMCTNTKGSYICSCNEGY-VLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G C Q+C + +C Y +L DN C + + +LI + + LE
Sbjct: 1882 GGCEQLCFAMPDTTTPTCACAYGMLSSDNRRCDDV---SDYLIFAAGGEVRSLHLEPSAT 1938
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS-----RLNRIEVCDENGTNRIVL--AKD 189
+ + L L L +D IY S +++ I + GT+ ++L +
Sbjct: 1939 SMPFEPVGAGRLQLNGYLDFDAADNRIYITQSGTEGRKISYINLNTAGGTDPVILDIITE 1998
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
+ P + D + ++W+D G +I+ DGS++ I+ T I + + LD
Sbjct: 1999 GLRYPTAIAFDWV--AKKIYWSD-GYPYKIQAANADGSSKVDIL-TGINYVYAIALDPC- 2053
Query: 250 RRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL 309
R Y LYW GG I +A+M G+N + L
Sbjct: 2054 -RGY----------------------------LYWTQYGG------IQRASMGGNNRTTL 2078
Query: 310 VSGQ-LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY 368
VS L LA+D + LY+S L +G+ IER+ +DGS R T++S+ +
Sbjct: 2079 VSNTGLAYGLAIDFDENKLYFSDL----------YGDT--IERVNLDGSGRETVVSSSMA 2126
Query: 369 WPNGLTLDIATRRVYFADSKLDFI 392
PNG+ I+ VY+ D+ L+ +
Sbjct: 2127 -PNGIA--ISGSYVYWTDTSLNAV 2147
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 17/148 (11%)
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
DS+L I + + + R +Y+I+ +++ K SG
Sbjct: 1674 VDSRLKII------LDNGIGRQGVARYMYFINVQDLETVIEVAK-----------TSGSY 1716
Query: 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
+ L +E+ + R+L+WTD G+ P +ER +DGSNR+ ++ + P LT
Sbjct: 1717 RKVLIRSVEDSPRAIAVNPIKRYLYWTDNGQTPALERSLLDGSNRTILVRNGMVQPTDLT 1776
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGR 402
+D+AT VY+ D + D I +++G R
Sbjct: 1777 IDMATHNVYWVDIRADSIQRISWNGGSR 1804
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/302 (19%), Positives = 122/302 (40%), Gaps = 53/302 (17%)
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++V + + G+ D++ +YW D RL+ +E +GT+R + ++ +G+ + P
Sbjct: 136 NLVDTRISWAAGVTLDYVNKRVYWADGRLDVLETVRYDGTDRKTI----VSGSQGLHVIP 191
Query: 202 SP-----GTRWLFWTDWGENPRIERIGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFA 255
P +++++DW + DG+ TI+ P G+ R++
Sbjct: 192 HPYDVTLFENYVYFSDWTRMGVVRINKFDGTGTDETIVHETTVRPYGVVSVHPVRQMQVT 251
Query: 256 D---------SKLDFIDCKS--------------LEIKTNVNYSTIFRK--LYWIDEGGN 290
S++ + +S E+ + T K L+
Sbjct: 252 SPCGNNNGGCSQMCVLSHRSDNDGLGYRCMCQTGYELAPDNRNCTRLDKFLLFSSRYAVR 311
Query: 291 GVPLKIGKANMDGSNASILVSG--QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
G+PL M +A + V G Y + D++ M+YYS +
Sbjct: 312 GIPLDP----MQSVDAMMPVLGLRSFYIGMDFDVQERMIYYSDTN------------QDQ 355
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I RI DG+ + T++ ++ P GL LD ++ +YF DS + I+ + + R+ + +
Sbjct: 356 IYRIKTDGTGKETVVPSRAMGPEGLALDWKSKHLYFTDSVFNTINVVHLENRWRKAIASV 415
Query: 409 DL 410
++
Sbjct: 416 NV 417
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 12/106 (11%)
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
LFW+D N +I R MDGSN+ I++ + P GL +D R++Y +S + I+ CN
Sbjct: 27 LFWSD-SINNKIFRSNMDGSNQREILNIGLETPEGLAVDWIGRKLYLVESAANRIEICNL 85
Query: 398 DGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGA 443
DGT R ++ D+ + +ALD G +++S G+
Sbjct: 86 DGTMRATLVAEDI-----------DQPRGIALDPSVGYMFWSDWGS 120
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 136/335 (40%), Gaps = 35/335 (10%)
Query: 131 LEEKGKDHRAQD-IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT-NRIVLAK 188
+E G D + IV L GLA D+ +Y+ D+RL+ I+ C+ +GT R VLA
Sbjct: 1118 IERAGMDGSGRTTIVTEKLYWPNGLAIDFPTQKLYFADARLDYIDFCNYDGTGRRQVLAS 1177
Query: 189 DNITQ-PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ + Q P + + ++W+D N DG+ T + ++ P L
Sbjct: 1178 NQLIQHPHSITI----FEDMVYWSDRTANRVYGVNKFDGTQNQTTVIRYLWGPLDLHAYH 1233
Query: 248 ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307
R+ ++ + C L + + V ++ + G L + + D S
Sbjct: 1234 PVRQPQGNNTCFNN-PCSHLCLLSPV------EEMGFKCACPTGARLNPDQRSCDTSVQP 1286
Query: 308 ILVSGQLYEALALDLE------------NGMLYYSTLKCTR---WLFWTDWGE--NPRIE 350
L+ Q+ L+ G+L + +++W + + I
Sbjct: 1287 FLLYVQMSSIKGAQLDPTDTATNPITPITGLLNGYDVDFDDDEGYIYWVERNNYTHTSIH 1346
Query: 351 RIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
R+ +DG NR+ + + +P+ + +D R +Y+++ I+ D + +LI
Sbjct: 1347 RVTLDGRNRTDFVPYAYVGYPHAIAIDWIGRNIYWSNPARFTIEVMRMDEDAPHRKVLIA 1406
Query: 410 LMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAE 444
+ E T + V A+ALD NG +Y++ G E
Sbjct: 1407 MAGEDTTSV---GLVNAIALDPLNGKMYWADRGNE 1438
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 108/256 (42%), Gaps = 39/256 (15%)
Query: 40 CSNTCHPTP---LGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY----- 91
CS+ C +P +G C CP G L+ D +C + QP ++ KG+
Sbjct: 1249 CSHLCLLSPVEEMGFKCACPTGARLNPDQRSC---DTSVQPFLLYVQMSSIKGAQLDPTD 1305
Query: 92 --------ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDI 143
I GY +++D+ + + + N ++ +R +
Sbjct: 1306 TATNPITPITGLLNGYDVDFDD------DEGYIYWVERNNYTHTSIHRVTLDGRNRTDFV 1359
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEV--CDENGTNR---IVLAKDNITQ---PR 195
+ + +A DWIG +IYW + IEV DE+ +R I +A ++ T
Sbjct: 1360 PYAYVGYPHAIAIDWIGRNIYWSNPARFTIEVMRMDEDAPHRKVLIAMAGEDTTSVGLVN 1419
Query: 196 GMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
+ LDP G ++W D G +I +DG+NR+ +I ++ + + +DI ++
Sbjct: 1420 AIALDPLNGK--MYWADRGNEGTVPKKIASADLDGTNRANLILDRVDHLDFIAVDIPAQK 1477
Query: 252 VYFADSKLDFIDCKSL 267
+Y+ ++ ++ S+
Sbjct: 1478 LYWTETHYGTVETCSI 1493
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 38/202 (18%), Positives = 85/202 (42%), Gaps = 42/202 (20%)
Query: 207 WLFWTDWGE--NPRIERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLDFID 263
+++W + + I R+ +DG NR+ + + +P+ + +D R +Y++
Sbjct: 1331 YIYWVERNNYTHTSIHRVTLDGRNRTDFVPYAYVGYPHAIAIDWIGRNIYWS-------- 1382
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
N + ++ +DE + I A D ++ ++ A+ALD
Sbjct: 1383 ----------NPARFTIEVMRMDEDAPHRKVLIAMAGEDTTSVGLV------NAIALDPL 1426
Query: 324 NGMLYYSTLKCTRWLFWTDWGEN----PRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
NG +Y W D G +I +DG+NR+ +I ++ + + +DI
Sbjct: 1427 NGKMY-----------WADRGNEGTVPKKIASADLDGTNRANLILDRVDHLDFIAVDIPA 1475
Query: 380 RRVYFADSKLDFIDFCNYDGTG 401
+++Y+ ++ ++ C+ G
Sbjct: 1476 QKLYWTETHYGTVETCSITSQG 1497
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 11/129 (8%)
Query: 111 INHSAAFLIISNRHSILVADLEEKGKDHRAQD-------IVVSGLDLVEGLAYDWIGGHI 163
+ + A +I + I D + RA IV + L GL+ D+ +
Sbjct: 417 VGNPRAIVIAPHSGYIFWTDWSRPARIERALTDGSERTVIVNTTLGWPNGLSIDYPQLKL 476
Query: 164 YWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIG 223
YW D+ ++IE + G NR L I P G+++ ++++TDW
Sbjct: 477 YWCDAFFDKIEFSNFGGQNRGRLNVRYINHPFGVVVHED----YVYFTDWNTRSINRVRK 532
Query: 224 MDGSNRSTI 232
DG N+ TI
Sbjct: 533 SDGGNQQTI 541
>gi|449507090|ref|XP_004176801.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 2 [Taeniopygia guttata]
Length = 4625
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 175/301 (58%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+KVCD DCPNGADE P C+ C C++ C P GA CTCP G L+ND
Sbjct: 1327 CVNLSKVCDNSADCPNGADESPLCNQESCSDNNAGCTHECIQGPFGAQCTCPIGYQLAND 1386
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D+NEC+ PG+CSQ C N +GS+ C C+EGY+LE + TCKA L++++R+
Sbjct: 1387 SKTCEDINECDPPGFCSQHCYNERGSFRCYCDEGYILEANGRTCKAAESGNLLLLVTSRN 1446
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+V ++ + G D +
Sbjct: 1447 QIVVDNITSQSHSIYSLVRDGTNIVAIDFDSVTDRIFWSDTTQDKIWSSYQNGTDRKI-- 1504
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ SG+ + E +A DW+G ++YW D L IEV +G++R VL +NIT PRG++LDP
Sbjct: 1505 VFDSGVTVTESIAVDWVGRNLYWTDFVLETIEVSKMDGSHRTVLISENITNPRGLVLDPR 1564
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+FWTDWG+NPRIE+ MDG+ R+ II+ KIYWPNGL++D + +YFAD+ LD+I
Sbjct: 1565 TDAHVMFWTDWGQNPRIEKASMDGNMRTVIINNKIYWPNGLSIDYPNKLLYFADAYLDYI 1624
Query: 263 D 263
D
Sbjct: 1625 D 1625
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 119/343 (34%), Positives = 176/343 (51%), Gaps = 63/343 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
C+ + KVCDG DCP G DE G C+++ C C CH +P G +C CP G
Sbjct: 280 HCIPIGKVCDGAADCPEGEDETNITAGRHCNVSRCAAL--SCQYRCHSSPSGGMCYCPAG 337
Query: 59 -EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+ SNDS TC D ++C+ G C Q+C + G + C C EGY LE+ H + A
Sbjct: 338 YTVSSNDSRTCVDFDDCQMWGVCDQLCEDRVGHHQCHCVEGYFLEHHRHCRANTSAGVAS 397
Query: 118 LIISNRHSILVADLEEK---------------GKD-----HR------AQDIVVS----- 146
+I SN +L+ DL + G D HR QD V S
Sbjct: 398 IIFSNGRDLLIGDLYGRNFRTLVQSQNRGIAVGVDFHFYLHRIFWTDTVQDKVFSINIDG 457
Query: 147 ---------GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+D E LA DWI +Y +++ +NRI++ + +GTNR+ L +N+ PRG+
Sbjct: 458 SDFQEVLNISVDTPENLAVDWINNKLYVVETSVNRIDMVNLDGTNRVTLIAENLGNPRGI 517
Query: 198 MLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
LDP+ G +LF++DW +P++ER MDG+NR +I TK+ WP G+TLDI ++R+Y+
Sbjct: 518 ALDPTVG--YLFFSDWDSLSGDPKVERAFMDGTNRQDLIKTKLGWPAGITLDIVSKRLYW 575
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
DS+ D+I+ V Y + R+ + GG+ +P G
Sbjct: 576 VDSRFDYIE--------TVTYDGLQRRT--VAHGGSLIPHPYG 608
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 185/403 (45%), Gaps = 89/403 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L KVC+ DC + +DE GC + EC C + C T CTC PG L +
Sbjct: 3089 CIELVKVCNRLDDCLDNSDE-KGCGVNECSDPSISGCDHDCTDTQTSFYCTCHPGYKLMS 3147
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC E P CSQ+C NT GSYIC C GY+ E D +C+ ++ + +LI SN
Sbjct: 3148 DKRTCDDIDECNETPSVCSQICENTAGSYICKCAPGYIREPDGKSCRQNSNISPYLIFSN 3207
Query: 123 RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
R+ L D ++ +++ GL V L +D R+E
Sbjct: 3208 RYY-----LRNLTADGQSYSLILQGLRNVVALDFD--------------RVE-------- 3240
Query: 183 RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 242
+ L+W D G N IER+ ++G+N+ T+IS + G
Sbjct: 3241 -----------------------KRLYWIDVGRN-VIERMFLNGTNKETVISDDVPNGEG 3276
Query: 243 LTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMD 302
+ +D R++Y+ D+ D + L+ + FRK K+ +D
Sbjct: 3277 IAVDWVGRKLYWVDAYRDCLYVSELDGR--------FRK-------------KLVDRCVD 3315
Query: 303 GSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
+N Q A+ + + G +Y WTDW + I R GMDG ++ I
Sbjct: 3316 ANNTFCF---QYPRAIVVHPKYGQIY-----------WTDWADRAYIGRAGMDGKEKTVI 3361
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
ISTK+ WPNGLT+D ++Y+ D+ L++I++ + DG R V
Sbjct: 3362 ISTKLEWPNGLTIDYTNDKLYWTDAHLNYIEYSDLDGHHRHTV 3404
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 177/457 (38%), Gaps = 147/457 (32%)
Query: 4 RCVNLTKVCDGKTDCPNGADE--------------------------------------- 24
RC++ +CDG DC + +DE
Sbjct: 3045 RCISKAYICDGDNDCGDESDELEHLCSTPEATCSPHHFKCDNGNCIELVKVCNRLDDCLD 3104
Query: 25 ---GPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC-EQPGY 79
GC + EC C + C T CTC PG L +D TC D++EC E P
Sbjct: 3105 NSDEKGCGVNECSDPSISGCDHDCTDTQTSFYCTCHPGYKLMSDKRTCDDIDECNETPSV 3164
Query: 80 CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHR 139
CSQ+C NT GSYIC C GY+ E D +C+ ++ + +LI SNR+ L D +
Sbjct: 3165 CSQICENTAGSYICKCAPGYIREPDGKSCRQNSNISPYLIFSNRYY-----LRNLTADGQ 3219
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ------ 193
+ +++ GL V L +D + +YW+D N IE NGTN+ + D++
Sbjct: 3220 SYSLILQGLRNVVALDFDRVEKRLYWIDVGRNVIERMFLNGTNKETVISDDVPNGEGIAV 3279
Query: 194 ---------------------------------------------PRGMMLDPSPGTRWL 208
PR +++ P G +
Sbjct: 3280 DWVGRKLYWVDAYRDCLYVSELDGRFRKKLVDRCVDANNTFCFQYPRAIVVHPKYGQ--I 3337
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
+WTDW + I R GMDG ++ IISTK+ WPNGLT+D ++Y+ D+ L++I+
Sbjct: 3338 YWTDWADRAYIGRAGMDGKEKTVIISTKLEWPNGLTIDYTNDKLYWTDAHLNYIE----- 3392
Query: 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLY 328
+++DG + + G L A+ + +Y
Sbjct: 3393 -----------------------------YSDLDGHHRHTVYDGTLPHPFAITIFEDTIY 3423
Query: 329 YSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
WTDW + DGS R+ +++T
Sbjct: 3424 -----------WTDWNTRTVEKGNKYDGSERTVLVNT 3449
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 145/324 (44%), Gaps = 73/324 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADE---GPG----CDLAECKHKFGLCSNTCHPTPLGALCTCPP 57
C+ L VCD DC + DE PG C C+H C+N G +C+C P
Sbjct: 3942 CIPLHYVCDNYDDCGDHFDEIGCNPGTERTCVENICEHN---CTNL---NEGGFICSCRP 3995
Query: 58 GEILSN-DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY--VLEYDNHTCKAINHS 114
G S D +C+D+NECE G C+Q C N+KGSY C C +G+ V + C A +
Sbjct: 3996 GYKASETDRNSCEDINECEIFGTCTQDCKNSKGSYECFCADGFKSVGDQQGKQCAADGNP 4055
Query: 115 AAFLI-------------------ISNRHSILVADLE--------------------EKG 135
L+ I N+ I D + E G
Sbjct: 4056 PLLLLPDNVRIRRYNISSEQYSDYIDNQERIQALDYDWDPEGIGLSIVYFSILGQGSEFG 4115
Query: 136 KDHRAQ---------------DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG 180
RA D+ + + +GLA DW+G H+YW D+ NRIEV +G
Sbjct: 4116 AIKRAYLPTFDSSRNNPTKEVDLNLKYIVNPDGLAVDWVGRHLYWTDAGTNRIEVAKLDG 4175
Query: 181 TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 240
R L ++ QP + ++P G ++WTDWG P+IE MDG R ++S + WP
Sbjct: 4176 RYRKWLIFSHLDQPAAIAVNPKRGL--MYWTDWGRQPKIECAWMDGQQRQMLVSEDLGWP 4233
Query: 241 NGLTLD-IATRRVYFADSKLDFID 263
GL++D + R+Y++DSK + I+
Sbjct: 4234 TGLSIDYLNNDRIYWSDSKENIIE 4257
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 105/221 (47%), Gaps = 50/221 (22%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V S L +G+A+DWI IY+ D I +G+NR V+A+ + +PR ++LDP
Sbjct: 2462 VVASDLGTPDGIAFDWINNRIYYSDYLNQTISSMAADGSNRTVIAR--VPRPRAIVLDPC 2519
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDW N +IER + G+ R+ I+ST + WPNGLTLD +++Y+AD+ L
Sbjct: 2520 RG--YMYWTDWSSNAKIERATLGGNFRTPIVSTNLVWPNGLTLDYEEQQLYWADANLQ-- 2575
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
KI + + G+N ++VS L+ A+ +
Sbjct: 2576 --------------------------------KIERCTLTGTNREVIVSTALH-PFAMTV 2602
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+ +Y WTDW DGS++ +I
Sbjct: 2603 FDQHIY-----------WTDWNTRSIYRANKYDGSDQIVMI 2632
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 107/467 (22%), Positives = 174/467 (37%), Gaps = 115/467 (24%)
Query: 78 GYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKA---------INHSAAFLIISNRHSIL 127
G C Q+C G + C+C G+ L DN TC ++ F + ++ HS
Sbjct: 2029 GVCQQLCLPVPGGLFTCACATGFQLNPDNRTCSPYSSFVVVSMLSAIKGFSLETSDHSEA 2088
Query: 128 VADLEEKGKDHRAQDIVVS-------------------------------------GLDL 150
+ L +G++ D+ + G +
Sbjct: 2089 MVPLAGRGRNALHVDVHMPSGFIYWCDFSSTVSSQNAIRKIKPDGSYFRNVITNGIGRNG 2148
Query: 151 VEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
+ G+A DW+ G++Y+ ++ L IEV N T R VL K I PR +++DP R+L
Sbjct: 2149 IRGIAIDWVAGNLYFTNAFLTETFIEVLRLNTTYRRVLLKTTIDMPRHIVVDPK--NRYL 2206
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI-----D 263
FW D+G+NP+IER +D +NR+ ++S I P GL +D + +Y+ D LD I D
Sbjct: 2207 FWADYGQNPKIERAFLDCTNRTVLVSEGIVTPRGLAIDHSNGYIYWVDDSLDMIARIQPD 2266
Query: 264 CKSLEI-KTNVNYSTIF------RKLYWID-----------EGGNGVPLKIGKANMDGSN 305
+EI + Y T + + W+D + GN + + N++
Sbjct: 2267 GGDVEIVRYGSRYPTPYGITIFGNSMIWVDRNLKKIFQASKQPGNTDQPTVIRDNINWLR 2326
Query: 306 ASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR----------------- 348
+ S LD+ + + C+ F + P+
Sbjct: 2327 DVTIYSSNFQSRSPLDVNSNPCLDNNGGCSHLCFALPDIQTPKCGCAFGTLGGDGKRCSI 2386
Query: 349 -------------IERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVYFADSKLDFID 393
+ I +D N S T + LD + R+YF S
Sbjct: 2387 STDDYLIFALENALRSIHLDPENHSPPFRTVSVLRTAVALDFDSINNRIYFTQSYP---- 2442
Query: 394 FCNYDGTGRQQVILIDLMVEFTNDLMGDNGVP-ALALDLENGMLYYS 439
GTGR + I + + D G P +A D N +YYS
Sbjct: 2443 ----SGTGRISYVSIYSGISSPTVVASDLGTPDGIAFDWINNRIYYS 2485
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 126/292 (43%), Gaps = 61/292 (20%)
Query: 74 CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI--LVADL 131
CEQ S N Y C C G+ L D C A+ FL+ S++ ++ + +L
Sbjct: 672 CEQVCVLSHKTDNDGLGYRCRCILGFDLHVDGRHCVAVRQ---FLLFSSQMAVRGIPFNL 728
Query: 132 EEK---------------GKDHRAQD-------------------------IVVSGLDLV 151
+ G D AQD + + ++ V
Sbjct: 729 STQEDVIIPVTGSPSYFVGIDFSAQDDTIFFSDTSKDMIYKQKTDGSGREILTANRVESV 788
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
E LA+DWI ++YW D R I V +R + + N+ PR +++ P G ++FWT
Sbjct: 789 EDLAFDWISKNLYWTDPRYRSISVMRLVDKSRRAIVQ-NLNNPRSIVVHPVIG--YIFWT 845
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKLDFID 263
DW +I R DGS+ I++T + WPNGL +D ++ R+Y+ D S D +D
Sbjct: 846 DWFRPAKIMRAWSDGSHALPIVNTTLGWPNGLAIDWSSLRLYWVDAFFDKIEHSTFDGLD 905
Query: 264 CKSLEIKTNVNYS---TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
++LE T + + TIF + + G +++ K+ DG +I+ G
Sbjct: 906 RRTLEHITQMTHPFGLTIFGGYAYFTDWRLGGIVRVRKS--DGGEMTIIRRG 955
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 190/472 (40%), Gaps = 88/472 (18%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGP-GCDLA---ECKHKFGLCSNTCHPTPLGALCTCPPG 58
+RC+ ++C+ + DC +G+DE C CK + CSN + PL +C
Sbjct: 3896 NRCIYSHELCNQEDDCGDGSDEKEEHCREPTPRPCKTEEFKCSNG-NCIPLHYVCDNYDD 3954
Query: 59 EILSNDSVTCQDMNE--CEQPGYCSQMCTN-TKGSYICSCNEGY-VLEYDNHTCKAINHS 114
D + C E C + C CTN +G +ICSC GY E D ++C+ IN
Sbjct: 3955 CGDHFDEIGCNPGTERTCVE-NICEHNCTNLNEGGFICSCRPGYKASETDRNSCEDINEC 4013
Query: 115 AAFLIISN-------RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD 167
F + + AD + D + + G + L +
Sbjct: 4014 EIFGTCTQDCKNSKGSYECFCADGFKSVGDQQGKQCAADGNPPLLLLP----------DN 4063
Query: 168 SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP---GTRWLFWTDWGENPRIERIGM 224
R+ R + E ++ I DN + + + D P G ++++ G+
Sbjct: 4064 VRIRRYNISSEQYSDYI----DNQERIQALDYDWDPEGIGLSIVYFSILGQGSEF----- 4114
Query: 225 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYW 284
G+ + + T N T ++ Y + +D + R LYW
Sbjct: 4115 -GAIKRAYLPTFDSSRNNPTKEVDLNLKYIVNPDGLAVD-------------WVGRHLYW 4160
Query: 285 IDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTD 342
D G N +I A +DG L+ L + A+A++ + G++Y WTD
Sbjct: 4161 TDAGTN----RIEVAKLDGRYRKWLIFSHLDQPAAIAVNPKRGLMY-----------WTD 4205
Query: 343 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDFCNYDGTG 401
WG P+IE MDG R ++S + WP GL++D + R+Y++DSK + I+ DGT
Sbjct: 4206 WGRQPKIECAWMDGQQRQMLVSEDLGWPTGLSIDYLNNDRIYWSDSKENIIESMKPDGTD 4265
Query: 402 RQQVILIDLMVEFTNDLMGDNGVPA-LALDLENGMLYY-STEGAEFLKTPLF 451
R V+ +GV + +LD+ G LY+ + E E K F
Sbjct: 4266 RTIVL---------------HGVGSPYSLDVFEGHLYWIAKERGEVWKKDKF 4302
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 46/194 (23%)
Query: 218 RIERIGM-DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
RI + + G + T++++ + P+G+ D R+Y++D
Sbjct: 2447 RISYVSIYSGISSPTVVASDLGTPDGIAFDWINNRIYYSD-------------------- 2486
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
++++ I DGSN +++ A+ LD C
Sbjct: 2487 -------YLNQ-------TISSMAADGSNRTVIARVPRPRAIVLD-----------PCRG 2521
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
+++WTDW N +IER + G+ R+ I+ST + WPNGLTLD +++Y+AD+ L I+ C
Sbjct: 2522 YMYWTDWSSNAKIERATLGGNFRTPIVSTNLVWPNGLTLDYEEQQLYWADANLQKIERCT 2581
Query: 397 YDGTGRQQVILIDL 410
GT R+ ++ L
Sbjct: 2582 LTGTNREVIVSTAL 2595
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 144/348 (41%), Gaps = 75/348 (21%)
Query: 80 CSQMCTNTKGS---YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
CS +C + + C+C G++L DN C + H FLI + I L + K
Sbjct: 1711 CSHLCLLSSSGPLFFSCACPSGWILSPDNRNCMRVEH--PFLIAVRDNIIYGISLNPEEK 1768
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS--RLNRIEVCDENGTNRIVLAKDN-ITQ 193
+ A + ++G+ + +D IYW+++ ++R+ +G NR V A I
Sbjct: 1769 TNDAM-VPIAGVQNGVDVDFDDSEQMIYWVENPGEIHRVR---SDGANRTVFASAAVIGA 1824
Query: 194 PRGMMLDPSPGTRWLFWTDWGENP---RIERIGMDGS--NRSTII-----STKIYWPNGL 243
P G+ LD W+ + NP IE + ++G R T+I S P GL
Sbjct: 1825 PVGLALD------WISANLYYSNPGTQSIEVLKLNGDIMYRKTLITNDGTSLGAGTPIGL 1878
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
+D A ++Y+ D D +GVP KI ANMDG
Sbjct: 1879 AVDPARGKLYWTDQGTD-----------------------------SGVPAKIASANMDG 1909
Query: 304 SNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
S L +G L E L +D++ LY++ IER MDG+NR T
Sbjct: 1910 SGIQTLFTGNLDHVEFLTIDIKEQKLYWAVTS------------TGMIERGNMDGTNRVT 1957
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
++ ++ + + + +Y+ D + I+ + TG +V+L D
Sbjct: 1958 LV---VHLSHPWGVAVYGTFLYYTDRDYEVIERVD-KATGANKVVLRD 2001
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 27/185 (14%)
Query: 242 GLTLDIATRRVYFADSKLDFI-----DCKSLEIKT--------NVNYSTIFRKLYWIDEG 288
G+ ++F+D+ D I D EI T ++ + I + LYW D
Sbjct: 747 GIDFSAQDDTIFFSDTSKDMIYKQKTDGSGREILTANRVESVEDLAFDWISKNLYWTDPR 806
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ + +D S +I+ + L+ ++ + + ++FWTDW +
Sbjct: 807 YRSISVM---RLVDKSRRAIVQN--------LNNPRSIVVHPVIG---YIFWTDWFRPAK 852
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I R DGS+ I++T + WPNGL +D ++ R+Y+ D+ D I+ +DG R+ + I
Sbjct: 853 IMRAWSDGSHALPIVNTTLGWPNGLAIDWSSLRLYWVDAFFDKIEHSTFDGLDRRTLEHI 912
Query: 409 DLMVE 413
M
Sbjct: 913 TQMTH 917
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 24/154 (15%)
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
D KS +N++ IF Y++ DG + S+++ G L +ALD
Sbjct: 3189 DGKSCRQNSNISPYLIFSNRYYLR-----------NLTADGQSYSLILQG-LRNVVALDF 3236
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+ + + L+W D G N IER+ ++G+N+ T+IS + G+ +D R++
Sbjct: 3237 D---------RVEKRLYWIDVGRN-VIERMFLNGTNKETVISDDVPNGEGIAVDWVGRKL 3286
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
Y+ D+ D + DG R++ L+D V+ N
Sbjct: 3287 YWVDAYRDCLYVSELDGRFRKK--LVDRCVDANN 3318
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 24/151 (15%)
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
NG L IG ++ G N LV Q +A+ ++ + +FWTD ++ ++
Sbjct: 402 NGRDLLIG--DLYGRNFRTLVQSQ-NRGIAVGVDFHFYLHR-------IFWTDTVQD-KV 450
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
I +DGS+ +++ + P L +D ++Y ++ ++ ID N DGT R +I +
Sbjct: 451 FSINIDGSDFQEVLNISVDTPENLAVDWINNKLYVVETSVNRIDMVNLDGTNRVTLIAEN 510
Query: 410 LMVEFTNDLMGDNGVP-ALALDLENGMLYYS 439
L G P +ALD G L++S
Sbjct: 511 L------------GNPRGIALDPTVGYLFFS 529
>gi|363736236|ref|XP_422014.3| PREDICTED: low-density lipoprotein receptor-related protein 2 [Gallus
gallus]
Length = 4661
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/299 (42%), Positives = 176/299 (58%), Gaps = 40/299 (13%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+KVCD DCPNGADE P C+ C C++ C P GA CTCP G L+ND
Sbjct: 1327 CVNLSKVCDNSADCPNGADESPLCNQESCSDNNAGCTHECIQGPFGAQCTCPVGYQLTND 1386
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D+NEC+ PG+CSQ C N +GS+ C C+EGY+LE + TCK L++++R+
Sbjct: 1387 SKTCEDINECDPPGFCSQHCYNERGSFRCYCDEGYILETNGRTCKVAESGNLLLLVASRN 1446
Query: 125 SILVADLEEKG-------KDHR-------------------AQD--------------IV 144
I+V ++ + +D R QD +
Sbjct: 1447 QIVVDNITSQSHSIYSLIRDGRNIVAIDFDSISDRIFWSDTTQDKIWSAYQNGTDRKVVF 1506
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
SG+ + E +A DW+G ++YW D L IEV +G++R VL +N+T PRG++LDP
Sbjct: 1507 DSGVTVTESIAVDWVGRNLYWTDFVLETIEVSKMDGSHRTVLISENVTNPRGLVLDPRID 1566
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+FWTDWG+NPRIE+ MDG R+ IIS+KIYWPNGL++D + +YFAD+ LD+ID
Sbjct: 1567 AHVMFWTDWGQNPRIEKASMDGKLRTVIISSKIYWPNGLSIDYPNKLLYFADAYLDYID 1625
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 143/478 (29%), Positives = 219/478 (45%), Gaps = 106/478 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
C+ + KVCDG DCP G DE G C+++ C C CH +P G +C CP G
Sbjct: 280 HCIPIGKVCDGAADCPAGEDETNITAGRHCNISHCAAL--SCQYRCHSSPSGGMCYCPSG 337
Query: 59 -EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I SNDS TC D ++C+ G C Q+C + G + C C EGY LE+ H + A
Sbjct: 338 YTISSNDSRTCIDFDDCKMWGVCDQLCEDRVGHHQCHCVEGYFLEHHRHCRANTSAGVAS 397
Query: 118 LIISNRHSILVADLEEK---------------GKD-----HR------AQDIVVS----- 146
+I SN +L+ DL + G D HR QD V S
Sbjct: 398 IIFSNGRDLLIGDLHGRNFRTLVQSQNRGVAVGVDFHFYLHRIFWTDTVQDKVFSINIDG 457
Query: 147 ---------GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+D E LA DW+ +Y +++ +NRI++ + +GTNR+ L +N+ PRG+
Sbjct: 458 SDFQEVLNVSVDTPENLAVDWVNNKLYVVETSVNRIDMVNLDGTNRVTLIAENLGNPRGI 517
Query: 198 MLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
LDP+ G +LF++DW +P++ER MDG+NR +I TK+ WP G+TLDI ++R+Y+
Sbjct: 518 ALDPTVG--YLFFSDWDSLSGDPKVERAFMDGTNRQDLIKTKLGWPAGITLDIVSKRLYW 575
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
DS+ D+I+ V Y + R+ I GG+ +P G L
Sbjct: 576 VDSRFDYIE--------TVTYDGLQRRT--IAHGGSLIPHPYGIT--------------L 611
Query: 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
+E +++TDW + ++ SN I + + P G+T
Sbjct: 612 FE-------------------HNVYFTDWTKMAVVKANKFSESNPQVIYQSSLR-PYGVT 651
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLE 432
+ A R+ Y + C + G +Q+ ++ + ND +G L DL
Sbjct: 652 VYHAARQPYVRNP-------CGNNNGGCEQICVLSHKTD--NDGLGYRCRCILGFDLH 700
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 180/411 (43%), Gaps = 100/411 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ + KVC+ +C + +DE GC + EC C + C T C+C PG L +
Sbjct: 3089 CIEMAKVCNRLDECLDNSDE-KGCGINECSDPSISGCDHVCTDTQTSFYCSCHPGYKLMS 3147
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC E P CSQ+C NT GSYIC C GY+ E D +C+ ++ + +LI SN
Sbjct: 3148 DKRTCDDIDECNETPSVCSQICENTAGSYICKCAPGYIREPDGKSCRQNSNISPYLIFSN 3207
Query: 123 RHSILVADLEEKGKDHR-----AQDIVVSGLDLV-------------------------- 151
R+ + +L G+ + +++V D V
Sbjct: 3208 RY--YLRNLTADGQSYSLILQGLRNVVALDFDRVEKRLYWIDVGRKVIERMFLNGTNKEA 3265
Query: 152 ---------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQP 194
EG+A DW+G +YW+D+ + I V + +G + L + P
Sbjct: 3266 VISDDVPNGEGIAVDWVGRKLYWVDAYKDCIYVSELDGRFQKKLVDRCVDINNTYCFQHP 3325
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
R +++ P G ++WTDW + I R GMDG + IISTK+ WPNGLT+D ++Y+
Sbjct: 3326 RAIVVHPKYGQ--VYWTDWADRAYIGRAGMDGKEKMVIISTKLEWPNGLTIDYTNDKLYW 3383
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
AD+ L++I+ +++DG + + G L
Sbjct: 3384 ADAHLNYIE----------------------------------YSDLDGHHRHTVYDGTL 3409
Query: 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ + +Y WTDW + DGS R+ +++T
Sbjct: 3410 PHPFAITIFEDTIY-----------WTDWNTRTVEKGNKYDGSGRTVLVNT 3449
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 165/381 (43%), Gaps = 93/381 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADE---GPG----CDLAECKHKFGLCSNTCHPTPLGALCTCPP 57
C+ L VCD DC + DE PG C C+H C+N G +C+C P
Sbjct: 3942 CIPLHYVCDNYDDCGDHFDEMGCNPGTERTCAENICEHN---CTNL---NEGGFICSCRP 3995
Query: 58 GEILS-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY--VLEYDNHTCKAINHS 114
G S N+ +C D+NECE G C+Q C N+KGSY C C +G+ V + C A +
Sbjct: 3996 GYKASENNRNSCDDINECEIFGTCTQDCKNSKGSYECFCADGFKSVGDQQGKQCAANGNP 4055
Query: 115 AAFLI-------------------ISNRHSILVADLE----------------------- 132
L+ I N+ I D +
Sbjct: 4056 PLLLLPDNVRIRRYNISSEQYSDYIDNQERIQALDYDWDPEGIGLSIVYFSILAQGSQFG 4115
Query: 133 ----------EKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENG 180
+ +++ +++ ++ +V +GLA DW+G H+YW D+ NRIEV +G
Sbjct: 4116 AIKRAYLPTFDSSRNNPTKEVDLNLRYIVNPDGLAVDWVGRHLYWTDAGTNRIEVAKLDG 4175
Query: 181 TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 240
R L + QP + ++P G ++WTDWG P+IE MDG R T++S + WP
Sbjct: 4176 RYRKWLIFSLLDQPAAIAVNPKHGL--MYWTDWGRQPKIECAWMDGQQRRTLVSEDLGWP 4233
Query: 241 NGLTLD-IATRRVYFADSKLDFIDCKSLE----------IKTNVNYSTIFRKLYWI---- 285
GL++D + R+Y++DSK + I+ + + + + LYWI
Sbjct: 4234 TGLSIDYLNNDRIYWSDSKENIIESMRHDGTDRTVVLHGVGSPYSLDVFEGHLYWIAKER 4293
Query: 286 ------DEGGNGVPLKIGKAN 300
D+ GNG +K+ N
Sbjct: 4294 GEVWKKDKFGNGEKVKVLTVN 4314
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 105/221 (47%), Gaps = 50/221 (22%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V S L +G+A+DWI +Y+ D I +G+NR V+A+ + +PR ++LDP
Sbjct: 2462 VVASDLGTPDGIAFDWINNRVYYSDYLNQTISSMAVDGSNRTVIAR--VPRPRAVVLDPC 2519
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDW N +IER + G+ R+ I+ST + WPNGLTLD +++Y+AD+ L
Sbjct: 2520 RG--YMYWTDWSSNAKIERATLGGNFRTPIVSTNLVWPNGLTLDYEEQQLYWADANLQ-- 2575
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
KI + + G+N ++VS L+ A+ L
Sbjct: 2576 --------------------------------KIERCTLTGTNREVIVSTALH-PFAMTL 2602
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+ +Y WTDW DGS++ +I
Sbjct: 2603 FDQHIY-----------WTDWNTRSIYRANKYDGSDQIVMI 2632
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 134/278 (48%), Gaps = 27/278 (9%)
Query: 33 CKHKFGLCSNTCHPTPLGAL-CTCPPGEILSNDSVTCQDMNE-------CEQPGYCSQMC 84
C + G+C + C P P G C C G L+ D+ TC N G+ +
Sbjct: 2024 CSNNIGVCQHLCLPVPGGLFSCACATGFQLNPDNRTCSPYNSFVIVSMLSAIKGFSLETS 2083
Query: 85 TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL-IISNRHSILVADLEEKGKDHRAQDI 143
+++ + VL D H + + +S++++I ++ G R ++
Sbjct: 2084 DHSEAMVPLAGRGRNVLHVDVHMPSGFIYWCDYSSTVSSQNAI--RKIKPDGSYFR--NV 2139
Query: 144 VVSGL--DLVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMML 199
V +G+ + + G+A DW+ G++Y+ ++ L IEV N T R VL K I PR +++
Sbjct: 2140 VTNGIGRNGIRGIAIDWVAGNLYFTNAFLTETFIEVLRLNTTYRRVLLKTTIDMPRHIVV 2199
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP R+LFW D+G+NP+IER +D +NR+ ++S I P GL +D + VY+ D L
Sbjct: 2200 DPK--NRYLFWADYGQNPKIERSFLDCTNRTVLVSEGIVTPRGLAIDHSNGYVYWVDDSL 2257
Query: 260 DFI-----DCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
D I D +EI V Y + + Y I GN +
Sbjct: 2258 DMIARIQPDGGDVEI---VRYGSRYPTPYGITIFGNSM 2292
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 93/181 (51%), Gaps = 16/181 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ + ++ VE LA+DWI ++YW D R I V +R + + N+ PR +++ P
Sbjct: 780 LTANRVESVEDLAFDWISKNLYWTDPRYRSISVMRLADKSRRAIVQ-NLNNPRSIVVHPV 838
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD------ 256
G ++FWTDW +I R DGS+ I++T + WPNGL +D ++ R+Y+ D
Sbjct: 839 IG--YIFWTDWFRPAKIMRAWSDGSHGLPIVNTTLGWPNGLAIDWSSLRLYWVDAFFDKI 896
Query: 257 --SKLDFIDCKSLEIKTNVNYS---TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
S D +D ++LE + + TIF + + G +++ K+ DG +I+
Sbjct: 897 EHSTFDGLDRRTLERVAQMTHPFGLTIFGGYAYFTDWRLGAIVRVRKS--DGGEMTIIRR 954
Query: 312 G 312
G
Sbjct: 955 G 955
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 188/489 (38%), Gaps = 122/489 (24%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGP---------GCDLAECKHKFGLCSNTCHPTPLGALC 53
+RC+ ++C+ + DC +G+DE C E K G C PL +C
Sbjct: 3896 NRCIYSHELCNQEDDCGDGSDEKEEHCREPTPRPCTTEEFKCSNGNC------IPLHYVC 3949
Query: 54 TCPPGEILSNDSVTCQDMNE--CEQPGYCSQMCTN-TKGSYICSCNEGYVLEYDN-HTCK 109
D + C E C + C CTN +G +ICSC GY +N ++C
Sbjct: 3950 DNYDDCGDHFDEMGCNPGTERTCAE-NICEHNCTNLNEGGFICSCRPGYKASENNRNSCD 4008
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
IN F + + K + G V
Sbjct: 4009 DINECEIFGTCTQ---------DCKNSKGSYECFCADGFKSVGD---------------- 4043
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP-RIERIGMDGSN 228
+ + C NG ++L DN+ R + ++D+ +N RI+ + D
Sbjct: 4044 -QQGKQCAANGNPPLLLLPDNVRIRRYNISSEQ-------YSDYIDNQERIQALDYD--- 4092
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL------------EIKTNVNYS 276
+ P G+ L I + S+ I L E+ N+ Y
Sbjct: 4093 ---------WDPEGIGLSIVYFSILAQGSQFGAIKRAYLPTFDSSRNNPTKEVDLNLRYI 4143
Query: 277 T---------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENG 325
+ R LYW D G N +I A +DG L+ L + A+A++ ++G
Sbjct: 4144 VNPDGLAVDWVGRHLYWTDAGTN----RIEVAKLDGRYRKWLIFSLLDQPAAIAVNPKHG 4199
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYF 384
++Y WTDWG P+IE MDG R T++S + WP GL++D + R+Y+
Sbjct: 4200 LMY-----------WTDWGRQPKIECAWMDGQQRRTLVSEDLGWPTGLSIDYLNNDRIYW 4248
Query: 385 ADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPA-LALDLENGMLYY-STEG 442
+DSK + I+ +DGT R V+ +GV + +LD+ G LY+ + E
Sbjct: 4249 SDSKENIIESMRHDGTDRTVVL---------------HGVGSPYSLDVFEGHLYWIAKER 4293
Query: 443 AEFLKTPLF 451
E K F
Sbjct: 4294 GEVWKKDKF 4302
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 32/186 (17%)
Query: 242 GLTLDIATRRVYFADS------KLDFIDCKS-----------LEIKTNVNYSTIFRKLYW 284
L D R+YF S ++ +I S L + + I ++Y+
Sbjct: 2425 ALDFDSINNRIYFTQSYPSRAGRISYISIYSGIGTPIVVASDLGTPDGIAFDWINNRVYY 2484
Query: 285 IDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWG 344
D + I +DGSN +++ A+ LD C +++WTDW
Sbjct: 2485 SDY----LNQTISSMAVDGSNRTVIARVPRPRAVVLD-----------PCRGYMYWTDWS 2529
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
N +IER + G+ R+ I+ST + WPNGLTLD +++Y+AD+ L I+ C GT R+
Sbjct: 2530 SNAKIERATLGGNFRTPIVSTNLVWPNGLTLDYEEQQLYWADANLQKIERCTLTGTNREV 2589
Query: 405 VILIDL 410
++ L
Sbjct: 2590 IVSTAL 2595
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 145/348 (41%), Gaps = 75/348 (21%)
Query: 80 CSQMCTNTKGS---YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
CS +C + + C+C G++L DN C + H FLI + I L + K
Sbjct: 1711 CSHLCLLSSSGPLFFSCACPSGWMLSPDNRNCMRVEH--PFLIAVRDNIIYGISLNPEEK 1768
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS--RLNRIEVCDENGTNRIVLAKDN-ITQ 193
+ A + ++G+ + +D IYW+++ ++R+ +G+NR V A I
Sbjct: 1769 TNDAM-VPIAGVQNGVDVDFDDSEQMIYWVENPGEIHRVR---SDGSNRTVFAPAAVIGA 1824
Query: 194 PRGMMLDPSPGTRWLFWTDWGENP---RIERIGMDGS--NRSTII-----STKIYWPNGL 243
P G+ LD W+ + NP IE + + G R T+I S P GL
Sbjct: 1825 PIGLALD------WISANLYYSNPGTQSIEVLKLHGEVMYRKTLITNDGTSLGAGTPIGL 1878
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
T+D A ++Y+ D D +GVP K+ ANMDG
Sbjct: 1879 TVDPARGKLYWTDQGTD-----------------------------SGVPAKVASANMDG 1909
Query: 304 SNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
S L +G L E + +D++ LY++ IE+ +DG+NR T
Sbjct: 1910 SGIQTLFTGNLDHVEFITIDIKEQKLYWAVTS------------TGVIEKGNVDGTNRVT 1957
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
++ I+ + + + +Y+ D + I+ + TG +V+L D
Sbjct: 1958 LV---IHLSHPWGIAVYDTFLYYTDRDYEVIERVD-KFTGANKVVLRD 2001
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 127/329 (38%), Gaps = 97/329 (29%)
Query: 78 GYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G C +C G + C+C G+ L DN TC N +F+I+S +I LE
Sbjct: 2029 GVCQHLCLPVPGGLFSCACATGFQLNPDNRTCSPYN---SFVIVSMLSAIKGFSLETS-- 2083
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
DH + ++G R VL D + P G
Sbjct: 2084 DHSEAMVPLAG---------------------------------RGRNVLHVD-VHMPSG 2109
Query: 197 MMLDPSPGTRWLFWTDWGE----NPRIERIGMDGSNRSTIISTKI--YWPNGLTLDIATR 250
+++W D+ I +I DGS +++ I G+ +D
Sbjct: 2110 ----------FIYWCDYSSTVSSQNAIRKIKPDGSYFRNVVTNGIGRNGIRGIAIDWVAG 2159
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
+YF ++ F+ +E+ + +T +R++ + K +D
Sbjct: 2160 NLYFTNA---FLTETFIEV---LRLNTTYRRV-------------LLKTTID-------- 2192
Query: 311 SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 370
+ + +D +N R+LFW D+G+NP+IER +D +NR+ ++S I P
Sbjct: 2193 ---MPRHIVVDPKN-----------RYLFWADYGQNPKIERSFLDCTNRTVLVSEGIVTP 2238
Query: 371 NGLTLDIATRRVYFADSKLDFIDFCNYDG 399
GL +D + VY+ D LD I DG
Sbjct: 2239 RGLAIDHSNGYVYWVDDSLDMIARIQPDG 2267
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 31/177 (17%)
Query: 252 VYFADSKLDFI-----DCKSLEIKT--------NVNYSTIFRKLYWIDEGGNGVPLKIGK 298
++F+D+ D I D EI T ++ + I + LYW D + +
Sbjct: 757 IFFSDTSRDMIYKQKTDGSGREILTANRVESVEDLAFDWISKNLYWTDPRYRSISV---- 812
Query: 299 ANMDGSNASILVSGQLYEALALDLEN--GMLYYSTLKCTRWLFWTDWGENPRIERIGMDG 356
+ ++ + A+ +L N ++ + + ++FWTDW +I R DG
Sbjct: 813 ---------MRLADKSRRAIVQNLNNPRSIVVHPVIG---YIFWTDWFRPAKIMRAWSDG 860
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
S+ I++T + WPNGL +D ++ R+Y+ D+ D I+ +DG R+ + + M
Sbjct: 861 SHGLPIVNTTLGWPNGLAIDWSSLRLYWVDAFFDKIEHSTFDGLDRRTLERVAQMTH 917
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 130/336 (38%), Gaps = 93/336 (27%)
Query: 93 CSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVE 152
C C G L+ D C + N + D E RA +++ + +
Sbjct: 2370 CGCAFG-TLDSDGKRCTISTDDYLIFALENALRSIHLDPENHSPPFRAVNVLRTAV---- 2424
Query: 153 GLAYDWIGGHIYWLDS------RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTR 206
L +D I IY+ S R++ I + GT IV+A D + P G+ D
Sbjct: 2425 ALDFDSINNRIYFTQSYPSRAGRISYISIYSGIGT-PIVVASD-LGTPDGIAFD------ 2476
Query: 207 WL----FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
W+ +++D+ N I + +DGSNR+ I ++ P + LD R Y
Sbjct: 2477 WINNRVYYSDY-LNQTISSMAVDGSNRTVI--ARVPRPRAVVLDPC--RGY--------- 2522
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALAL 320
+YW D N KI +A + G+ + +VS L L L
Sbjct: 2523 -------------------MYWTDWSSNA---KIERATLGGNFRTPIVSTNLVWPNGLTL 2560
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL----- 375
D E LY W D +IER + G+NR I+ST ++ P +TL
Sbjct: 2561 DYEEQQLY-----------WAD-ANLQKIERCTLTGTNREVIVSTALH-PFAMTLFDQHI 2607
Query: 376 ---DIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
D TR +Y A+ YDG+ Q+++I
Sbjct: 2608 YWTDWNTRSIYRANK---------YDGS--DQIVMI 2632
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 25/177 (14%)
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
D KS +N++ IF Y++ DG + S+++ G L +ALD
Sbjct: 3189 DGKSCRQNSNISPYLIFSNRYYLR-----------NLTADGQSYSLILQG-LRNVVALDF 3236
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+ + + L+W D G IER+ ++G+N+ +IS + G+ +D R++
Sbjct: 3237 D---------RVEKRLYWIDVGRK-VIERMFLNGTNKEAVISDDVPNGEGIAVDWVGRKL 3286
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYS 439
Y+ D+ D I D GR Q L+D V+ N + A+ + + G +Y++
Sbjct: 3287 YWVDAYKDCIYVSELD--GRFQKKLVDRCVDINNTYCFQHPR-AIVVHPKYGQVYWT 3340
>gi|47210425|emb|CAF92450.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4260
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/299 (43%), Positives = 171/299 (57%), Gaps = 40/299 (13%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+NLT VCD DCPNGADE P C+ C C++ C P GA CTCP G LSND
Sbjct: 859 CINLTTVCDNTPDCPNGADESPLCNQESCSDNNAGCTHGCIQGPFGAQCTCPVGYQLSND 918
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC D++EC PG CSQ C N +GS+ C C +GY LE D TCK + AFL++++R+
Sbjct: 919 SKTCGDVDECSPPGICSQHCFNERGSFRCHCQDGYALEADQRTCKVSDLRQAFLLVASRN 978
Query: 125 SILVADLEEKG-------KDHR-------------------AQD--------------IV 144
I+ D+ + +D R +QD I
Sbjct: 979 QIVQDDITSQPNVVHSLVRDGRNIVALDFDSVTDRVYWSDTSQDRIWSASNNGSDRTVIF 1038
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
SG+ + E LA DW+G ++YW D L +EV +GT+R VL +N+T PRG++LDP
Sbjct: 1039 DSGVTVTESLAVDWVGRNLYWTDYVLETVEVSKLDGTHRTVLVSENVTNPRGLVLDPRSS 1098
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+FWTDWG NPRIER MDG R+ I+++K+YWPNGLT+D +YFAD+ LDFID
Sbjct: 1099 AHLMFWTDWGRNPRIERASMDGKLRTVIVNSKLYWPNGLTIDYPNNLLYFADAYLDFID 1157
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 193/409 (47%), Gaps = 95/409 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L++VCD DC + +DE GC + EC C ++C TP +CTC PG L
Sbjct: 2633 HCISLSRVCDRNDDCSDNSDEK-GCGVNECTDPSIHHCDHSCTDTPTSFICTCRPGYRLM 2691
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D+NEC E P CSQ+C NT GSY+C C G++ E D H+C+ + A +LI S
Sbjct: 2692 SDGKTCDDVNECAETPRVCSQVCENTVGSYVCKCAPGFLREPDGHSCRQNSDIAPYLIFS 2751
Query: 122 NRH--------------------SILVAD-----------------LEEKGKDHRAQDIV 144
NR+ S++ D +E + +++V
Sbjct: 2752 NRYYLRNLSTDGAAYSLILQGLTSVVALDFDRVDRRLYWIDVSRRVIERMSYNGSNREVV 2811
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPRG 196
V+G+ EGLA DWI +YW+DS + ++V + +G LA+ + PR
Sbjct: 2812 VTGVLHGEGLAVDWIARKLYWVDSFSDCLKVSELDGRFVKKLAEHCVDANNTFCFENPRA 2871
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
++L P G +++WTDWG+ I R+GMDG+N++ II+TK+ WPNG+T+D ++Y++D
Sbjct: 2872 IVLHPKYG--FVYWTDWGDKAFIGRVGMDGTNKAPIITTKLEWPNGITIDYTNDKLYWSD 2929
Query: 257 SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE 316
+ L +I+ +++DG + + G L
Sbjct: 2930 AHLSYIE----------------------------------FSDLDGQHRHTVYDGNLPH 2955
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
AL + +Y WTDW + DGS R +++T
Sbjct: 2956 PFALTVFEDTVY-----------WTDWNTRTVEKGNKYDGSGRQALVNT 2993
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 95/161 (59%), Gaps = 15/161 (9%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
Q ++ +D E LA DW+ +Y +++ +NRI+V D +G+NR+ L +N+ PRG+ +
Sbjct: 12 VQVVLNVSVDYPENLAVDWVNNKLYVVEASVNRIDVVDFDGSNRVTLITENLGNPRGVAV 71
Query: 200 DPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
DP+ G ++F+TDW P +ER MDG+NR II TK+ WP+G+TLDI +R+Y+ D
Sbjct: 72 DPTVG--YMFFTDWEAINGQPGLERAFMDGTNRYGIIGTKLGWPSGITLDIEAKRIYWVD 129
Query: 257 SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
S+ D+I+ Y + RK + GG VP G
Sbjct: 130 SRYDYIE--------TATYDGVHRKT--VVHGGAVVPHPFG 160
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 51/245 (20%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V L +G+AYDWI IY+ D I G+ R V+ ++++PR +MLDP
Sbjct: 1999 VVAFDLGAPDGIAYDWINRRIYYSDFVNQSINSMSVEGSQRTVVV--HVSRPRAIMLDPC 2056
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWG + +IER + G+ R+ I+++ + WPNGLTLD R+Y+AD+ L
Sbjct: 2057 RG--YMYWTDWGTHAKIERATLGGNFRTDIVNSSLVWPNGLTLDYEDERLYWADASLQ-- 2112
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
KI ++++ GS+ ++VS +Y A+ +
Sbjct: 2113 --------------------------------KIERSSLTGSDREVIVSTAIY-PFAMTM 2139
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+ +Y WTDW DGS + +I P + + +A+R+
Sbjct: 2140 FDQFIY-----------WTDWNTRSIYRANKHDGSGQRVMIQNLPSRPMDIHV-LASRKQ 2187
Query: 383 YFADS 387
DS
Sbjct: 2188 QQCDS 2192
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
+G+A DW+G HIYW DS NRIEV +G R L ++ QP + ++P R ++WT
Sbjct: 3722 DGIALDWVGRHIYWTDSGTNRIEVAKLDGRYRKWLIHTDLDQPAAIAVNPL--LRMMYWT 3779
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKLDFID 263
DWG PRIE MDG NR+ ++ + WP GLT+D + R+Y+ DSK + ++
Sbjct: 3780 DWGRKPRIETAWMDGQNRAVLVDEDLGWPTGLTVDYLNGNRIYWCDSKENTVE 3832
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 110/239 (46%), Gaps = 61/239 (25%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G C Q+C +G + C+C G+ L DN TC ++++IS +I LE G+
Sbjct: 1562 GACEQICLPAPQGFFTCACATGFKLNTDNRTCAPYQ---SYVVISTLSAIKGFSLE--GE 1616
Query: 137 DHRA-------------------------------------------------QDIVVSG 147
DH + IV SG
Sbjct: 1617 DHSEAMVPVAGRGRNALHIDVHMASGFIYWCDFSSTVAAQNGVRRIKPDGSGLRSIVTSG 1676
Query: 148 L--DLVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ + + G+A DW G++Y+ ++ L +EV N T R VL K + PR +++DP
Sbjct: 1677 IGRNGIRGIAVDWAAGNLYFTNAFLTETYVEVLRLNTTFRRVLLKTQVDMPRHIVVDPR- 1735
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
R+LFW D+G++P+IER +DG+NR+ ++S+ I P GL LD + VY+ D LD I
Sbjct: 1736 -RRYLFWADYGQHPKIERALLDGTNRTILVSSGIVTPRGLALDWQSGYVYWVDDSLDMI 1793
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 108/247 (43%), Gaps = 48/247 (19%)
Query: 74 CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI--LVADL 131
CE S N Y C C GY L D C A+ H FL+ S++ ++ + +L
Sbjct: 203 CEHICVLSHQSDNGGLGYRCKCRMGYDLHADGKHCFAVRH---FLLFSSQLAVRGIPFNL 259
Query: 132 EEK---------------GKDHRAQDIVV-------------------------SGLDLV 151
+ G D A+D V+ + +D V
Sbjct: 260 SSQEDIILPVTGSPSYFIGVDFSAEDDVIFFSDTAKDMIFKQKVDGTGREVLTANRVDGV 319
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
E LAYDWI ++YW D R I V +R + + N+ PR +++ P G ++FWT
Sbjct: 320 EDLAYDWISKNLYWTDPRYRSISVMKVADKSRRAIVR-NLNNPRAIVVHPLIG--YIFWT 376
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
DW +I R DGS+ +I++T + WPNGL +D R+Y+ D+ D I+ + + +
Sbjct: 377 DWYRPAKIMRAWGDGSHALSIVNTTLGWPNGLAIDWNAMRLYWVDAFFDKIEHSNFDGQN 436
Query: 272 NVNYSTI 278
++ I
Sbjct: 437 RISLDRI 443
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 46/192 (23%)
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST 277
++ + MDGSN +++ + +P L +D ++Y ++ ++ ID
Sbjct: 1 QVFSVDMDGSNVQVVLNVSVDYPENLAVDWVNNKLYVVEASVNRID-------------- 46
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRW 337
+ DGSN L++ L + ++ + Y
Sbjct: 47 --------------------VVDFDGSNRVTLITENLGNPRGVAVDPTVGY--------- 77
Query: 338 LFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDF 394
+F+TDW P +ER MDG+NR II TK+ WP+G+TLDI +R+Y+ DS+ D+I+
Sbjct: 78 MFFTDWEAINGQPGLERAFMDGTNRYGIIGTKLGWPSGITLDIEAKRIYWVDSRYDYIET 137
Query: 395 CNYDGTGRQQVI 406
YDG R+ V+
Sbjct: 138 ATYDGVHRKTVV 149
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 87/179 (48%), Gaps = 29/179 (16%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRW 337
+ R +YW D G N +I A +DG L+ L + A+ + N +L R
Sbjct: 3729 VGRHIYWTDSGTN----RIEVAKLDGRYRKWLIHTDLDQPAAIAV-NPLL--------RM 3775
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDFCN 396
++WTDWG PRIE MDG NR+ ++ + WP GLT+D + R+Y+ DSK + ++
Sbjct: 3776 MYWTDWGRKPRIETAWMDGQNRAVLVDEDLGWPTGLTVDYLNGNRIYWCDSKENTVESMK 3835
Query: 397 YDGTGRQQVI----------LIDLMVEFTN----DLMGDNGVPALALDLENGMLYYSTE 441
DGT R+ VI L E + D G P +LD+ G LY++T+
Sbjct: 3836 PDGTDRKAVISGGQSSALSGFSKLQKETPHMHLVSTFSDIGHP-YSLDVFEGHLYWTTK 3893
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 32/182 (17%)
Query: 242 GLTLDIATRRVYFADS------KLDFIDCKS-----------LEIKTNVNYSTIFRKLYW 284
L D+ RR+YF S K+ ++ + L + Y I R++Y+
Sbjct: 1962 ALDFDLTERRIYFTQSSGAGASKISYVSLSAPTSTPVVVAFDLGAPDGIAYDWINRRIYY 2021
Query: 285 IDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWG 344
D V I +++GS +++V A+ LD C +++WTDWG
Sbjct: 2022 SD----FVNQSINSMSVEGSQRTVVVHVSRPRAIMLD-----------PCRGYMYWTDWG 2066
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
+ +IER + G+ R+ I+++ + WPNGLTLD R+Y+AD+ L I+ + G+ R+
Sbjct: 2067 THAKIERATLGGNFRTDIVNSSLVWPNGLTLDYEDERLYWADASLQKIERSSLTGSDREV 2126
Query: 405 VI 406
++
Sbjct: 2127 IV 2128
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 158/406 (38%), Gaps = 93/406 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGAL-CTCPPG-EI 60
C+ L CD DC + +DE GC +C + C G L C+C PG +
Sbjct: 3489 HCIPLPYACDDYDDCGDQSDE-LGCHRGSTHTCSDNICEHNCTDLREGGLLCSCRPGYKP 3547
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH--TCKAINHSAAFL 118
+ + C+D+NECE G C Q C NTKGS+ C C +G+V + H C A + L
Sbjct: 3548 RATEKHMCEDVNECEVYGTCPQECKNTKGSFECFCAKGFVSIGEPHGTECAAQGNPPVLL 3607
Query: 119 IISNRHSILVADLEEKGKDHRAQDIVVSGLDLV-----EGLA------------------ 155
+ N ++ D+ + LD + +GL+
Sbjct: 3608 LPDNVRIRRFNLSSQQYSDYVDNAEHIQALDYLWDPEGQGLSKMSACMPLHRYRLGLSYC 3667
Query: 156 ---YDWIGGHIYWL----DSRLNRIEVC-----DENGTNRIVLAKDN---ITQPRGMMLD 200
Y G +YW S I+ ++ G+N + N +++P G+ LD
Sbjct: 3668 CFLYGCAAGVVYWTVLGRGSEFGSIKCAYMPTFNDYGSNPVKEVDLNLRYVSKPDGIALD 3727
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
R ++WTD G N RIE +DG R +I T + P + ++ R +Y+ D
Sbjct: 3728 WV--GRHIYWTDSGTN-RIEVAKLDGRYRKWLIHTDLDQPAAIAVNPLLRMMYWTD---- 3780
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEAL 318
W G +I A MDG N ++LV L L
Sbjct: 3781 -----------------------W------GRKPRIETAWMDGQNRAVLVDEDLGWPTGL 3811
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+D NG ++W D EN +E + DG++R +IS
Sbjct: 3812 TVDYLNGNR----------IYWCDSKEN-TVESMKPDGTDRKAVIS 3846
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 138/347 (39%), Gaps = 73/347 (21%)
Query: 80 CSQMCTNTK---GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
CS +C + Y C+C G+ L D TC + FL++ I L + K
Sbjct: 1243 CSHICLLSAVGPAYYSCACPSGWTLAADQITCTRVED--PFLVVVRDSIIYGISLNPEDK 1300
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT-QPR 195
+ A + V+GL + +D IYW++ I +GTNR A I P
Sbjct: 1301 SNDAM-VPVAGLQNGYDVDFDDNEQIIYWVE-HPGEIHSVKSDGTNRTEFAPAAILGSPV 1358
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGM-----DGSNRSTIIS-----TKIYWPNGLTL 245
G+ LD W+ + NP + I + + R T+I+ T P G+ +
Sbjct: 1359 GLALD------WITQNLYYTNPSTQSIEVLKLRGEVQYRKTLITNNGSPTGAGSPVGIAV 1412
Query: 246 DIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG-NGVPLKIGKANMDGS 304
D A ++Y W D+G +G+P K+ ANMDGS
Sbjct: 1413 DPARGKLY------------------------------WTDQGTESGIPAKVASANMDGS 1442
Query: 305 NASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
N L + L E L +D+ LY++ T G IE DG+NR TI
Sbjct: 1443 NPVNLFTNNLDHIEFLTVDIRENKLYWAV---------TSTGA---IESGDPDGTNRITI 1490
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
+ T + P G+ + +YF D + I+ + TG +V+L D
Sbjct: 1491 V-TGLSHPWGVA--VYGSHLYFTDRDFEVIERVD-KTTGTNRVVLRD 1533
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 43/203 (21%)
Query: 252 VYFADSKLDFI-----DCKSLEIKT--------NVNYSTIFRKLYWIDEGGNGVPLKIGK 298
++F+D+ D I D E+ T ++ Y I + LYW D + +
Sbjct: 288 IFFSDTAKDMIFKQKVDGTGREVLTANRVDGVEDLAYDWISKNLYWTDPRYRSISV---- 343
Query: 299 ANMDGSNASILVSGQLYEALALDLEN--GMLYYSTLKCTRWLFWTDWGENPRIERIGMDG 356
+ V+ + A+ +L N ++ + + ++FWTDW +I R DG
Sbjct: 344 ---------MKVADKSRRAIVRNLNNPRAIVVHPLIG---YIFWTDWYRPAKIMRAWGDG 391
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
S+ +I++T + WPNGL +D R+Y+ D+ D I+ N+DG R I +D + + ++
Sbjct: 392 SHALSIVNTTLGWPNGLAIDWNAMRLYWVDAFFDKIEHSNFDGQNR---ISLDRITQISH 448
Query: 417 DLMGDNGVPALALDLENGMLYYS 439
L + G YY+
Sbjct: 449 ---------PFGLTIFEGYAYYT 462
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 139/338 (41%), Gaps = 47/338 (13%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI-VLAK 188
+E D + + ++V S L GL D+ +Y+ D+ L+ I+ CD NG NR VLA
Sbjct: 1113 IERASMDGKLRTVIVNSKLYWPNGLTIDYPNNLLYFADAYLDFIDYCDYNGNNRKQVLAS 1172
Query: 189 DNITQ-PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
D + Q P + + +++WTD N R+ R T++ + P GL
Sbjct: 1173 DLVLQHPHAITI----FEDFVYWTDRYIN-RVMRAHKWHGENQTVMLFNLPQPMGLVAVH 1227
Query: 248 ATRRVYFADSKLDFIDCKSLEIKTNVN--YSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305
R+ +S L C + + + V Y + W ++ +
Sbjct: 1228 PARQPAGGNSCLR-SPCSHICLLSAVGPAYYSCACPSGWTLAADQITCTRVEDPFL---- 1282
Query: 306 ASILVSGQLYEALALDLE----NGMLYYSTLKCTRWLFWTD------WGENP-RIERIGM 354
++V + ++L+ E + M+ + L+ + + D W E+P I +
Sbjct: 1283 --VVVRDSIIYGISLNPEDKSNDAMVPVAGLQNGYDVDFDDNEQIIYWVEHPGEIHSVKS 1340
Query: 355 DGSNRSTIISTKIYW-PNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
DG+NR+ I P GL LD T+ +Y+ + I +V+ + V+
Sbjct: 1341 DGTNRTEFAPAAILGSPVGLALDWITQNLYYTNPSTQSI-----------EVLKLRGEVQ 1389
Query: 414 FTNDLMGDNGVP-------ALALDLENGMLYYSTEGAE 444
+ L+ +NG P +A+D G LY++ +G E
Sbjct: 1390 YRKTLITNNGSPTGAGSPVGIAVDPARGKLYWTDQGTE 1427
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 47/200 (23%)
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRK---------- 281
+++ + P+G+ D RR+Y++D I+ S+E + R
Sbjct: 1999 VVAFDLGAPDGIAYDWINRRIYYSDFVNQSINSMSVEGSQRTVVVHVSRPRAIMLDPCRG 2058
Query: 282 -LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTRWL 338
+YW D G + KI +A + G+ + +V+ L L LD E+ LY
Sbjct: 2059 YMYWTDWGTHA---KIERATLGGNFRTDIVNSSLVWPNGLTLDYEDERLY---------- 2105
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL--------DIATRRVYFADSKLD 390
W D +IER + GS+R I+ST IY P +T+ D TR +Y A+
Sbjct: 2106 -WAD-ASLQKIERSSLTGSDREVIVSTAIY-PFAMTMFDQFIYWTDWNTRSIYRANK--- 2159
Query: 391 FIDFCNYDGTGRQQVILIDL 410
+DG+G Q+V++ +L
Sbjct: 2160 ------HDGSG-QRVMIQNL 2172
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 98/243 (40%), Gaps = 42/243 (17%)
Query: 40 CSNTCHPTPLGAL---CTCPPGEILSNDSVTCQDMNECEQP-------------GYCSQM 83
CS+ C + +G C CP G L+ D +TC + E P +
Sbjct: 1243 CSHICLLSAVGPAYYSCACPSGWTLAADQITCTRV---EDPFLVVVRDSIIYGISLNPED 1299
Query: 84 CTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDI 143
+N + GY +++D+ N + + H + ++ G + R +
Sbjct: 1300 KSNDAMVPVAGLQNGYDVDFDD------NEQIIYWV---EHPGEIHSVKSDGTN-RTEFA 1349
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG--TNRIVLAKDNIT-----QPRG 196
+ L GLA DWI ++Y+ + IEV G R L +N + P G
Sbjct: 1350 PAAILGSPVGLALDWITQNLYYTNPSTQSIEVLKLRGEVQYRKTLITNNGSPTGAGSPVG 1409
Query: 197 MMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
+ +DP+ G L+WTD G ++ MDGSN + + + LT+DI ++
Sbjct: 1410 IAVDPARGK--LYWTDQGTESGIPAKVASANMDGSNPVNLFTNNLDHIEFLTVDIRENKL 1467
Query: 253 YFA 255
Y+A
Sbjct: 1468 YWA 1470
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 6/116 (5%)
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
DIV S L GL D+ +YW D+ L +IE G++R V+ I M D
Sbjct: 2083 DIVNSSLVWPNGLTLDYEDERLYWADASLQKIERSSLTGSDREVIVSTAIYPFAMTMFD- 2141
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++++WTDW DGS + +I P + + +A+R+ DS
Sbjct: 2142 ----QFIYWTDWNTRSIYRANKHDGSGQRVMIQNLPSRPMDIHV-LASRKQQQCDS 2192
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 135 GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK-DNITQ 193
G A IV + L GLA DW +YW+D+ ++IE + +G NRI L + I+
Sbjct: 389 GDGSHALSIVNTTLGWPNGLAIDWNAMRLYWVDAFFDKIEHSNFDGQNRISLDRITQISH 448
Query: 194 PRGMMLDPSPGTRWLFWTDW 213
P G+ + + ++TDW
Sbjct: 449 PFGLTIFEG----YAYYTDW 464
>gi|449275400|gb|EMC84272.1| Low-density lipoprotein receptor-related protein 2, partial [Columba
livia]
Length = 4626
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 140/369 (37%), Positives = 201/369 (54%), Gaps = 57/369 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+KVCD DCPNGADE P C+ C C++ C P GA CTCP G L+ND
Sbjct: 1295 CVNLSKVCDNSADCPNGADESPLCNQESCSDNNAGCTHECIQGPFGAQCTCPVGYHLAND 1354
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D+NEC+ PG+CSQ C N +GS+ C C+EGY+LE + TCKA L++++R+
Sbjct: 1355 SKTCEDINECDPPGFCSQHCYNERGSFRCYCDEGYILETNGRTCKAAESGNLLLLVASRN 1414
Query: 125 SILVADLEEK----------GKDHRAQD------------------------------IV 144
I+V ++ + G++ A D +
Sbjct: 1415 QIVVDNITSQSHSIYSVVRDGRNIVAIDFDSITGRIFWSDTTEDKIWSAYQNGTDRKIVF 1474
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
SG+ + E +A DW+G ++YW D L IEV +G++R VL +N+T PRG++LDP
Sbjct: 1475 DSGVTVTESIAVDWVGRNLYWTDFVLETIEVSKMDGSHRTVLISENVTNPRGLVLDPRID 1534
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID- 263
+FWTDWG+NPRIE+ MDG R+ II+ KIYWPNGL++D + +YFAD+ LD+ID
Sbjct: 1535 AHVMFWTDWGQNPRIEKASMDGKMRTVIINNKIYWPNGLSIDYPNKLLYFADAYLDYIDF 1594
Query: 264 -----------CKSLEIKTNVNYSTIFRK-LYWIDEGGNGVPLKIGKANMDGSNASILVS 311
S I + + T+F +YW D N V I G N ++++
Sbjct: 1595 CDYDGNNRRQVLASDLILQHPHALTVFEDFVYWSDRYTNRV---IRANKWHGGNQTVMIY 1651
Query: 312 GQLYEALAL 320
+++ L L
Sbjct: 1652 -NIHQPLGL 1659
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 144/478 (30%), Positives = 220/478 (46%), Gaps = 106/478 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
C+ + KVCDG DCP G DE G C+++ C C CH +P G +C CP G
Sbjct: 248 HCIPVGKVCDGTADCPAGEDETNITAGRHCNISNCAAL--SCQYRCHSSPSGGMCYCPAG 305
Query: 59 EILS-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I+S NDS TC D ++C+ G C Q+C + G + C C EGY LE+ H + A
Sbjct: 306 YIISSNDSRTCVDFDDCKMWGVCDQLCEDRVGHHQCHCVEGYFLEHHRHCRANTSAGVAS 365
Query: 118 LIISNRHSILVADLEEK---------------GKD-----HR------AQDIVVS----- 146
LI SN +L+ DL + G D HR QD V S
Sbjct: 366 LIFSNGRDLLIGDLHGRSFRTLVQSQNRGVAVGVDFHFYLHRIFWTDTVQDKVFSINIDG 425
Query: 147 ---------GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+D E LA DW+ +Y +++ +NRI++ + +GTNR+ L +N+ PRG+
Sbjct: 426 SDFQEVLNISVDTPENLAVDWVNNKLYVVETSVNRIDMVNLDGTNRVTLIAENLGNPRGI 485
Query: 198 MLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
LDP+ G +LF++DW +P++ER MDG+NR +I TK+ WP G+TLDI ++R+Y+
Sbjct: 486 ALDPTVG--YLFFSDWDSLSGDPKVERAFMDGTNRQDLIKTKLGWPAGITLDIVSKRLYW 543
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
DS+ D+I+ V Y + R+ I GG+ +P G L
Sbjct: 544 VDSRFDYIE--------TVTYDGLQRRT--IAHGGSLIPHPYGIT--------------L 579
Query: 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
+E +++TDW + ++ SN I + + P G+T
Sbjct: 580 FE-------------------HNVYFTDWTKMAVVKANKFSESNPQVIYQSSLR-PYGVT 619
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLE 432
+ A R+ Y + C + G +Q+ ++ + ND +G L DL
Sbjct: 620 VYHAARQPYVRNP-------CGSNNGGCEQICVLSHKTD--NDGLGYRCRCTLGFDLH 668
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 183/403 (45%), Gaps = 89/403 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ + KVC+ DC + +DE GC + EC C + C T C+C G L +
Sbjct: 3057 CIEMVKVCNRLDDCLDNSDE-KGCGINECSDPSISGCDHDCTDTQTSFYCSCHAGYKLMS 3115
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC E P CSQ+C NT GSYIC C GY+ E D +C+ ++ + +LI SN
Sbjct: 3116 DKRTCDDIDECNETPSVCSQICENTAGSYICKCAPGYIREPDGKSCRQNSNISPYLIFSN 3175
Query: 123 RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
R+ L D ++ +++ GL V L +D R+E
Sbjct: 3176 RYY-----LRNLTADGQSYSLILQGLRNVVALDFD--------------RVE-------- 3208
Query: 183 RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 242
+ L+W D G IER+ ++G+N+ +IS + G
Sbjct: 3209 -----------------------KRLYWIDVGRK-VIERMFLNGTNKEAVISDDVPNGEG 3244
Query: 243 LTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMD 302
+ +D R++Y+ D+ D + L+ + FRK K+ +D
Sbjct: 3245 IAVDWVGRKLYWVDAYKDCLYVSELDGR--------FRK-------------KLVDRCVD 3283
Query: 303 GSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
+N Q A+ + + G +Y WTDW + I R GMDG ++ I
Sbjct: 3284 ANNTFCF---QYPRAIVVHPKYGQIY-----------WTDWADRAYIGRAGMDGKEKTVI 3329
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
ISTK+ WPNGLT+D ++Y+AD+ L++I++ + DG R V
Sbjct: 3330 ISTKLEWPNGLTIDYTNDKLYWADAHLNYIEYSDLDGHHRHTV 3372
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 184/454 (40%), Gaps = 141/454 (31%)
Query: 4 RCVNLTKVCDGKTDCPNGADE--------------------------------------- 24
RC++ +CDG DC + +DE
Sbjct: 3013 RCISKAYICDGDNDCGDESDELEHLCTTPEATCSPHHFKCDNGNCIEMVKVCNRLDDCLD 3072
Query: 25 ---GPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC-EQPGY 79
GC + EC C + C T C+C G L +D TC D++EC E P
Sbjct: 3073 NSDEKGCGINECSDPSISGCDHDCTDTQTSFYCSCHAGYKLMSDKRTCDDIDECNETPSV 3132
Query: 80 CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHR 139
CSQ+C NT GSYIC C GY+ E D +C+ ++ + +LI SNR+ + +L G+ +
Sbjct: 3133 CSQICENTAGSYICKCAPGYIREPDGKSCRQNSNISPYLIFSNRY--YLRNLTADGQSYS 3190
Query: 140 -----AQDIVVSGLDLV-----------------------------------EGLAYDWI 159
+++V D V EG+A DW+
Sbjct: 3191 LILQGLRNVVALDFDRVEKRLYWIDVGRKVIERMFLNGTNKEAVISDDVPNGEGIAVDWV 3250
Query: 160 GGHIYWLDSRLNRIEVCDENG------TNRIVLAKDN--ITQPRGMMLDPSPGTRWLFWT 211
G +YW+D+ + + V + +G +R V A + PR +++ P G ++WT
Sbjct: 3251 GRKLYWVDAYKDCLYVSELDGRFRKKLVDRCVDANNTFCFQYPRAIVVHPKYGQ--IYWT 3308
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
DW + I R GMDG ++ IISTK+ WPNGLT+D ++Y+AD+ L++I+
Sbjct: 3309 DWADRAYIGRAGMDGKEKTVIISTKLEWPNGLTIDYTNDKLYWADAHLNYIE-------- 3360
Query: 272 NVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYST 331
+++DG + + G L A+ + +Y
Sbjct: 3361 --------------------------YSDLDGHHRHTVYDGTLPHPFAITIFEDTIY--- 3391
Query: 332 LKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
WTDW + DGS+R+ +++T
Sbjct: 3392 --------WTDWNTRTVEKGNKYDGSDRTVLVNT 3417
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 143/324 (44%), Gaps = 73/324 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADE---GPG----CDLAECKHKFGLCSNTCHPTPLGALCTCPP 57
C+ L VCD DC + DE PG C C+H C+N G +C+C P
Sbjct: 3910 CIPLHYVCDNYDDCGDHFDEIGCNPGTARTCAENICEHN---CTNL---NEGGFICSCRP 3963
Query: 58 GEILSN-DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY--VLEYDNHTCKAINHS 114
G S + +C D+NECE G C+Q C N+KGSY C C +G+ V + C A +
Sbjct: 3964 GYKASETNRNSCDDINECEIFGTCTQDCKNSKGSYECFCADGFRSVGDQQGKQCAANGNP 4023
Query: 115 AAFLI-------------------ISNRHSILVADLE--------------------EKG 135
L+ I N+ I D + E G
Sbjct: 4024 PLLLLPDNVRIRRYNISSEQYSDYIDNQERIQALDYDWDPEGIGLSVVYFSILGQGSEFG 4083
Query: 136 KDHRAQ---------------DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG 180
RA D+ + + +GLA DW+G H+YW D+ NRIEV +G
Sbjct: 4084 AIKRAYLPTFDSSSNNPTKEVDLNLKYIVNPDGLAVDWVGRHLYWTDAGTNRIEVAKLDG 4143
Query: 181 TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 240
R L + QP + ++P G ++WTDWG P+IE MDG R ++S + WP
Sbjct: 4144 RYRKWLVFSLLDQPAAIAVNPKRGL--MYWTDWGRQPKIECAWMDGQQRQALVSEDLGWP 4201
Query: 241 NGLTLD-IATRRVYFADSKLDFID 263
GL++D + R+Y++DSK + I+
Sbjct: 4202 TGLSIDYLNNDRIYWSDSKENIIE 4225
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 178/470 (37%), Gaps = 121/470 (25%)
Query: 78 GYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRH 124
G C Q+C G + C+C G+ L DN TC ++F+I+S + H
Sbjct: 1997 GVCQQLCLPLPGGLFSCACATGFQLNPDNRTCSPY---SSFVIVSMLSAIKGFSLETSDH 2053
Query: 125 SILVADLEEKGKDHRAQDI----------------------------------VVS---G 147
S + L +G++ D+ VV+ G
Sbjct: 2054 SEAMVPLAGRGRNALHVDVHMPSGFIFWCDFSSTVSSQNAIRKIKPDGSYFRNVVTNGIG 2113
Query: 148 LDLVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+ + G+A DW+ G++Y+ ++ L IEV N T R VL K I PR +++DP T
Sbjct: 2114 RNGIRGIAIDWVAGNLYFTNAFLAETFIEVLRLNTTYRRVLLKTTIDMPRHIVVDPK--T 2171
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI--- 262
R+LFW D+G+NP+IER +D +NR+ ++S I P GL +D + +Y+ D LD I
Sbjct: 2172 RYLFWADYGQNPKIERAFLDCTNRTVLVSEGIVTPRGLAIDHSNGYIYWVDDSLDMIARI 2231
Query: 263 --DCKSLEI-KTNVNYSTIF------RKLYWID-----------EGGNGVPLKIGKANMD 302
D +EI + Y T + + W+D E GN + + N++
Sbjct: 2232 QPDGGEVEIVRYGSRYPTPYGITIFGNSMIWVDRNLKKVFQASKEPGNTDQPTVIRDNIN 2291
Query: 303 GSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR-------------- 348
+ + LD+ N + C+ F + PR
Sbjct: 2292 WLRDVTIYDRRFQSRSPLDVNNNPCLDNNGGCSHLCFALPDVQTPRCGCAFGTLGSDGKR 2351
Query: 349 ----------------IERIGMDGSNRSTIISTKIYWPNGLTLDI--ATRRVYFADSKLD 390
+ I +D N S T + LD R+YF S
Sbjct: 2352 CSISTDDYLIFALENALRSIHLDPENHSPPFRTVNVLRTAVALDFDSVNNRIYFTQSYP- 2410
Query: 391 FIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVP-ALALDLENGMLYYS 439
GTGR I I + + D G P +A D N +YYS
Sbjct: 2411 -------SGTGRISYISIYPGISSPTVVASDLGTPDGIAFDWINNRVYYS 2453
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 105/221 (47%), Gaps = 50/221 (22%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V S L +G+A+DWI +Y+ + I +G+NR V+A+ + +PR ++LDP
Sbjct: 2430 VVASDLGTPDGIAFDWINNRVYYSEYLNQTISSMAVDGSNRTVIAR--VPRPRAIVLDPC 2487
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDW N +IER + G+ R+ I+ST + WPNGLTLD +++Y+AD+ L
Sbjct: 2488 RG--YMYWTDWSSNAKIERATLGGNFRTPIVSTNLVWPNGLTLDYEEQQLYWADANLQ-- 2543
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
KI + + G+N ++VS L+ A+ L
Sbjct: 2544 --------------------------------KIERCTLTGTNREVIVSTALH-PFAMTL 2570
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+ +Y WTDW DGS++ +I
Sbjct: 2571 FDQHIY-----------WTDWNTRSIYRANKYDGSDQIVMI 2600
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 126/292 (43%), Gaps = 61/292 (20%)
Query: 74 CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI--LVADL 131
CEQ S N Y C C G+ L D C A+ FL+ S++ ++ + +L
Sbjct: 640 CEQICVLSHKTDNDGLGYRCRCTLGFDLHVDGRHCVAVQQ---FLLFSSQMAVRGIPFNL 696
Query: 132 EEK---------------GKDHRAQD-------------------------IVVSGLDLV 151
+ G D AQD + + ++ V
Sbjct: 697 STQEDVIIPVTGSPSYFVGIDFCAQDETIFFSDTSKDMIYKQKTDGSGREILTANRVESV 756
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
E LA+DWI ++YW D R I V +R + + N+ PR +++ P G ++FWT
Sbjct: 757 EDLAFDWISKNLYWTDPRYRSISVMRLADKSRRAIVQ-NLNNPRSIVIHPVIG--YIFWT 813
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKLDFID 263
DW +I R DGS+ I++T + WPNGL +D ++ R+Y+ D S D +D
Sbjct: 814 DWFRPAKIMRAWSDGSHALPIVNTTLGWPNGLAIDWSSLRLYWVDAFFDKIEHSTFDGLD 873
Query: 264 CKSLEIKTNVNYS---TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
++LE T + + TIF + + G +++ K+ DG +I+ G
Sbjct: 874 RRTLERITQMTHPFGLTIFGGYAYFTDWRLGAIVRVRKS--DGGEMTIIRRG 923
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 46/194 (23%)
Query: 218 RIERIGM-DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
RI I + G + T++++ + P+G+ D RVY+++
Sbjct: 2415 RISYISIYPGISSPTVVASDLGTPDGIAFDWINNRVYYSE-------------------- 2454
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
++++ I +DGSN +++ A+ LD C
Sbjct: 2455 -------YLNQ-------TISSMAVDGSNRTVIARVPRPRAIVLD-----------PCRG 2489
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
+++WTDW N +IER + G+ R+ I+ST + WPNGLTLD +++Y+AD+ L I+ C
Sbjct: 2490 YMYWTDWSSNAKIERATLGGNFRTPIVSTNLVWPNGLTLDYEEQQLYWADANLQKIERCT 2549
Query: 397 YDGTGRQQVILIDL 410
GT R+ ++ L
Sbjct: 2550 LTGTNREVIVSTAL 2563
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 187/488 (38%), Gaps = 120/488 (24%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGP---------GCDLAECKHKFGLCSNTCHPTPLGALC 53
+RC+ ++C+ + DC +G+DE C E K G C PL +C
Sbjct: 3864 NRCIYSHELCNQEDDCGDGSDEKEEHCIEPTPRPCTTEEFKCSNGNC------IPLHYVC 3917
Query: 54 T-------------CPPGEILSNDSVTCQDMNECEQPGYCSQMCTN-TKGSYICSCNEGY 99
C PG + TC + C CTN +G +ICSC GY
Sbjct: 3918 DNYDDCGDHFDEIGCNPGT-----ARTCAE-------NICEHNCTNLNEGGFICSCRPGY 3965
Query: 100 -VLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDW 158
E + ++C IN F + + K + G V
Sbjct: 3966 KASETNRNSCDDINECEIFGTCTQ---------DCKNSKGSYECFCADGFRSVGD----- 4011
Query: 159 IGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP- 217
+ + C NG ++L DN+ R + ++D+ +N
Sbjct: 4012 ------------QQGKQCAANGNPPLLLLPDNVRIRRYNISSEQ-------YSDYIDNQE 4052
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDI-ATRRVY---FADSKLDFIDCKSLEIKTNV 273
RI+ + D +S + G + A +R Y F S + L +K V
Sbjct: 4053 RIQALDYDWDPEGIGLSVVYFSILGQGSEFGAIKRAYLPTFDSSSNNPTKEVDLNLKYIV 4112
Query: 274 NYST-----IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGM 326
N + R LYW D G N +I A +DG LV L + A+A++ + G+
Sbjct: 4113 NPDGLAVDWVGRHLYWTDAGTN----RIEVAKLDGRYRKWLVFSLLDQPAAIAVNPKRGL 4168
Query: 327 LYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFA 385
+Y WTDWG P+IE MDG R ++S + WP GL++D + R+Y++
Sbjct: 4169 MY-----------WTDWGRQPKIECAWMDGQQRQALVSEDLGWPTGLSIDYLNNDRIYWS 4217
Query: 386 DSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPA-LALDLENGMLYY-STEGA 443
DSK + I+ DGT R V+ +GV + +LD+ G LY+ + E
Sbjct: 4218 DSKENIIESMRPDGTDRTVVL---------------HGVGSPYSLDVFEGHLYWIAKERG 4262
Query: 444 EFLKTPLF 451
E K F
Sbjct: 4263 EVWKKDKF 4270
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 143/348 (41%), Gaps = 75/348 (21%)
Query: 80 CSQMCTNTKGS---YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
CS +C + + C+C G++L DN C + H FLI + I L + K
Sbjct: 1679 CSHLCLLSSSGPLFFSCACPSGWMLSPDNRNCMRVEH--PFLITVRDNIIYGISLNPEEK 1736
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS--RLNRIEVCDENGTNRIVLAKDN-ITQ 193
+ A + ++G+ + +D IYW+++ ++R+ +G NR V A I
Sbjct: 1737 TNDAM-VPIAGVQNGVDVDFDDSEQMIYWVENPGEIHRVR---SDGANRTVFAPAAVIGA 1792
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN-----RSTII-----STKIYWPNGL 243
P G+ LD W+ + NP + I + + R T+I S P GL
Sbjct: 1793 PIGLALD------WISANLYYSNPGTQSIEVLKLHSYVKYRKTLITNDGTSLGAGTPIGL 1846
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
T+D A ++Y+ D D +GVP K+ ANMDG
Sbjct: 1847 TVDPARGKLYWTDQGTD-----------------------------SGVPAKVASANMDG 1877
Query: 304 SNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
S L +G L E + +D++ LY++ IER +DG+NR T
Sbjct: 1878 SGVQTLFTGNLDHVEFVTIDIKEQKLYWAVTS------------TGVIERGNVDGTNRVT 1925
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
++ ++ + + + +Y+ D + I+ + TG +V+L D
Sbjct: 1926 LV---VHLSHPWGIAVYDTFLYYTDRDYEVIERVD-KSTGGNKVVLRD 1969
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 83/187 (44%), Gaps = 31/187 (16%)
Query: 242 GLTLDIATRRVYFADSKLDFI-----DCKSLEIKT--------NVNYSTIFRKLYWIDEG 288
G+ ++F+D+ D I D EI T ++ + I + LYW D
Sbjct: 715 GIDFCAQDETIFFSDTSKDMIYKQKTDGSGREILTANRVESVEDLAFDWISKNLYWTDPR 774
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN--GMLYYSTLKCTRWLFWTDWGEN 346
+ + + ++ + A+ +L N ++ + + ++FWTDW
Sbjct: 775 YRSISV-------------MRLADKSRRAIVQNLNNPRSIVIHPVIG---YIFWTDWFRP 818
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I R DGS+ I++T + WPNGL +D ++ R+Y+ D+ D I+ +DG R+ +
Sbjct: 819 AKIMRAWSDGSHALPIVNTTLGWPNGLAIDWSSLRLYWVDAFFDKIEHSTFDGLDRRTLE 878
Query: 407 LIDLMVE 413
I M
Sbjct: 879 RITQMTH 885
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 24/154 (15%)
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
D KS +N++ IF Y++ DG + S+++ G L +ALD
Sbjct: 3157 DGKSCRQNSNISPYLIFSNRYYLR-----------NLTADGQSYSLILQG-LRNVVALDF 3204
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+ + + L+W D G IER+ ++G+N+ +IS + G+ +D R++
Sbjct: 3205 D---------RVEKRLYWIDVGRK-VIERMFLNGTNKEAVISDDVPNGEGIAVDWVGRKL 3254
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
Y+ D+ D + DG R++ L+D V+ N
Sbjct: 3255 YWVDAYKDCLYVSELDGRFRKK--LVDRCVDANN 3286
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 124/327 (37%), Gaps = 65/327 (19%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLN-RIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ + +D+ + D +++W D N +IE + TNR VL + I PRG+ +D
Sbjct: 2154 LLKTTIDMPRHIVVDPKTRYLFWADYGQNPKIERAFLDCTNRTVLVSEGIVTPRGLAIDH 2213
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTI-ISTKIYWPNGLTL--------DIATRRV 252
S G +++W D + I RI DG + ++ P G+T+ D ++V
Sbjct: 2214 SNG--YIYWVDDSLD-MIARIQPDGGEVEIVRYGSRYPTPYGITIFGNSMIWVDRNLKKV 2270
Query: 253 YFADSKLDFIDCKSLEIKTNVNY---STIFRKLYW------------IDEGGNGVPL--- 294
+ A + D + I+ N+N+ TI+ + + +D G L
Sbjct: 2271 FQASKEPGNTD-QPTVIRDNINWLRDVTIYDRRFQSRSPLDVNNNPCLDNNGGCSHLCFA 2329
Query: 295 -----------KIGKANMDGSNASILVSGQLYEALA-------LDLENGMLYYSTLKCTR 336
G DG SI L AL LD EN + T+ R
Sbjct: 2330 LPDVQTPRCGCAFGTLGSDGKRCSISTDDYLIFALENALRSIHLDPENHSPPFRTVNVLR 2389
Query: 337 WLFWTDWGE--------------NPRIERIGM-DGSNRSTIISTKIYWPNGLTLDIATRR 381
D+ RI I + G + T++++ + P+G+ D R
Sbjct: 2390 TAVALDFDSVNNRIYFTQSYPSGTGRISYISIYPGISSPTVVASDLGTPDGIAFDWINNR 2449
Query: 382 VYFADSKLDFIDFCNYDGTGRQQVILI 408
VY+++ I DG+ R + +
Sbjct: 2450 VYYSEYLNQTISSMAVDGSNRTVIARV 2476
>gi|327283157|ref|XP_003226308.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Anolis carolinensis]
Length = 4621
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 129/299 (43%), Positives = 176/299 (58%), Gaps = 40/299 (13%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+KVCD +DCPNGADE P C+ C C++ C P GA C+CP G L+ND
Sbjct: 1321 CVNLSKVCDNLSDCPNGADESPLCNQETCSDNNAGCTHECIQGPFGAQCSCPFGYQLAND 1380
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D+NEC+ PG+CSQ C N +GS+ C C+EGYVLE + TCK L++++R+
Sbjct: 1381 SKTCEDINECDPPGFCSQHCHNERGSFRCYCDEGYVLEPNGKTCKVAEPGYLLLLVASRN 1440
Query: 125 SILVADLEEKG-------KDHR-------------------AQD--------------IV 144
I+ ++ +D R QD +
Sbjct: 1441 QIVADNITSHAQRIYSLVRDGRNIVAIDFDSVTERIFWSDITQDKIWSAYQNGTDRKVVF 1500
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
SG+ + E +A DWIG ++YW D L IEV +GT+R VL +N+T PRG++LDP
Sbjct: 1501 DSGVTVTESIAVDWIGRNLYWTDYVLETIEVSRLDGTHRTVLISENVTNPRGLVLDPRTD 1560
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+FWTDWG NPRIER MDG+ R+TI+S+KIYWPNGL++D + +YFAD+ LD+ID
Sbjct: 1561 AHVMFWTDWGRNPRIERASMDGTLRTTIVSSKIYWPNGLSIDYPNKLLYFADAYLDYID 1619
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 141/478 (29%), Positives = 221/478 (46%), Gaps = 106/478 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+C+ + KVCDG DCP G DE G C+++ C C CH +P G C CP G
Sbjct: 274 QCIPIGKVCDGTPDCPAGEDETNITAGRLCNISRCAAL--SCQYRCHSSPSGGTCFCPAG 331
Query: 59 EILS-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
++S NDS TC D ++C+ G C Q+C + G + C C EGYVLE+ H + A
Sbjct: 332 FVISSNDSRTCVDFDDCKMWGVCDQVCEDRVGHHQCRCVEGYVLEHHRHCRANTSSGVAS 391
Query: 118 LIISNRHSILVADLEEKG------KDHRA--------------------QDIVVS----- 146
+I SN +LV DL +G +R QD V S
Sbjct: 392 VIFSNGRDLLVGDLHGRGFRTLVQSRNRGVAVGVDFHFQLRRIFWTDTVQDKVFSVRIDG 451
Query: 147 ---------GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+D E LA DWI +Y +++ +NRI++ + +GTNR+ L +++ PRG+
Sbjct: 452 TDIHEVLNVSVDTPENLAVDWINNKLYIVETSVNRIDMVNLDGTNRVTLIAESLGNPRGI 511
Query: 198 MLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
+DP+ G +LF++DW +P++ER MDG+NR ++ TK+ WP G+TLDI ++R+Y+
Sbjct: 512 AVDPTIG--YLFFSDWDSLSGDPKVERAFMDGTNRLDLVKTKLGWPAGITLDIVSKRLYW 569
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
DS+ D+I+ V Y + R+ I GG+ +P G + L
Sbjct: 570 VDSRFDYIE--------TVTYDGLQRRT--IAHGGSLIPHPYGIS--------------L 605
Query: 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
+E L++TDW + ++ SN I + + P G+T
Sbjct: 606 FE-------------------HNLYFTDWTKMALMKANKFADSNPQVIYQSSLR-PYGVT 645
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLE 432
+ A R+ Y + C+ + G Q+ ++ + ND +G L DL
Sbjct: 646 IYHALRQPYVRNP-------CSGNNGGCDQICVLSHRTD--NDGLGYRCKCMLGFDLH 694
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 180/409 (44%), Gaps = 96/409 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ + K+C+ DC + +DE GC + EC C + C T C+C PG L +
Sbjct: 3088 CIEVAKLCNRVDDCLDNSDE-KGCGINECNDSSISGCDHVCTDTLTSFYCSCHPGYRLMS 3146
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
+ +C D++EC E P CSQ+C N+ GSYIC C GY+ E D +C+ ++ + +LI SN
Sbjct: 3147 NKRSCDDVDECSETPSVCSQICENSVGSYICKCAPGYIREPDGKSCRQNSNISPYLIFSN 3206
Query: 123 RH--------------------SILVADLEEKGK------------------DHRAQDIV 144
R+ +++ D + K + I+
Sbjct: 3207 RYYLRNLTTDGQSYSLILQGLRNVVALDFDRVEKRLYWIDVGRKVIERMFFNGTSKETII 3266
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPRG 196
G+ EG+A DW+G +YW+D + + V + +G R L + PR
Sbjct: 3267 SDGVPSGEGIAVDWVGRKLYWVDDSKDCLYVSELDGRFRKKLIDRCLDPNSTFCFQYPRA 3326
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+++ P G +FWTDW E I R+GMDG N++ IIS K+ WPNGLT+D ++Y+AD
Sbjct: 3327 VVVHPKYGQ--VFWTDWAERAYIGRVGMDGKNKTVIISAKLEWPNGLTIDYTNDKLYWAD 3384
Query: 257 SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE 316
+ L++I+ +N+DG + + G L
Sbjct: 3385 AHLNYIE----------------------------------YSNLDGQHRHTVYDGTLPH 3410
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ + +Y WTDW + +GS R+ +++T
Sbjct: 3411 PFAITIFEDTIY-----------WTDWNTRTVEKGNKYNGSGRTVLVNT 3448
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 152/358 (42%), Gaps = 83/358 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADE-------GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPP 57
C+ L VCD DC + DE G C C+H C+N T G +CTC P
Sbjct: 3941 CIPLHYVCDNYDDCGDHFDELGCNSGTGRTCTENICEHN---CTNL---TEGGFICTCRP 3994
Query: 58 GEILSN-DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY--VLEYDNHTCKAINHS 114
G ++ + C+D+NEC+ G C Q+C NTKGSY C C EG+ V + C A +
Sbjct: 3995 GYRPNDLNRNNCEDINECDIFGTCPQVCQNTKGSYECFCAEGFRSVGDQQGKQCAANGNP 4054
Query: 115 AAFLI-------------------ISNRHSILVADLE--------------------EKG 135
L+ I N I D E G
Sbjct: 4055 PILLLPDNVRIRRYNMSSEQYSDYIENEEHIQAIDYHWDPEGIGLSVVYYSILGRGSEFG 4114
Query: 136 KDHRAQ---------------DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG 180
RA D+ + L GLA DW+G H+YW D+ NR+EV +G
Sbjct: 4115 SIKRAYIPTFESSGNNPVKEVDLNLRYLVSPVGLAVDWVGRHLYWTDAGTNRVEVAKLDG 4174
Query: 181 TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 240
R L + QP + ++P G ++WTDWG P+IE MDG R ++S + WP
Sbjct: 4175 RYRKWLIYSQLDQPAAIAVNPKLGL--MYWTDWGRQPKIESAWMDGQQRQILVSEDLGWP 4232
Query: 241 NGLTLD-IATRRVYFADS--------KLDFIDCKSLEIKTNVNYS-TIFR-KLYWIDE 287
GL++D + R+Y++D K D D K++ + YS +F LYWI +
Sbjct: 4233 TGLSIDYLNGDRIYWSDQKENLVESMKFDGTDRKTILHGVSSPYSLDVFEGHLYWISK 4290
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 50/223 (22%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V S L +G+A+DW+ +Y+ D I +G+NR V+A+ + +PR ++LDP
Sbjct: 2456 LVASDLGTPDGIAFDWMNRRLYYSDYLNQTISSMAVDGSNRSVVAR--VPRPRAIVLDPC 2513
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDW + +IER + G+ R+ IIST + WPNGLTLD +++Y+AD+ L
Sbjct: 2514 QG--YMYWTDWSTSAKIERATLGGNFRTAIISTNLVWPNGLTLDYEDQQLYWADASLQ-- 2569
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
KI ++++ G N +++S LY A+ L
Sbjct: 2570 --------------------------------KIERSSITGENREVIISTALY-PFAMTL 2596
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
+ +Y WTDW DGS++ +IS+
Sbjct: 2597 FDQHIY-----------WTDWNTRSIYRANKYDGSDQIVMISS 2628
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 119/252 (47%), Gaps = 37/252 (14%)
Query: 33 CKHKFGLCSNTCHPTPLGAL-CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
C + G+C + C P P G C C G L+ D+ TC S + S
Sbjct: 2018 CSNNVGVCQHLCLPVPGGLFSCACATGFRLNPDNRTCSPY---------SSFVVVSMLSA 2068
Query: 92 ICSCNEGYVLEYDNHTCKAIN-------------HSAAFLI----ISNRHSILVADLEEK 134
I +G+ LE +H+ + H + I ++R A + K
Sbjct: 2069 I----KGFSLETSDHSEAMVPMAGRGRNALHVDVHMPSGFIYWCDFTSRVPSQNAIRKIK 2124
Query: 135 GKDHRAQDIVVSGLDL--VEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDN 190
++++ SG+ L + G+A DW+ ++Y+ ++ + IEV N T R VL K
Sbjct: 2125 PDGSYFRNVITSGIGLNGIRGIAIDWVADNLYFTNAFVAETFIEVLRLNTTYRRVLLKTT 2184
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
I PR +++DP R+LFW D+G+NP+IER +D SNR+ ++S I P GL +D +T
Sbjct: 2185 IDMPRHIVVDPK--NRYLFWADYGQNPKIERALLDCSNRTVLVSEGIVTPRGLAIDHSTG 2242
Query: 251 RVYFADSKLDFI 262
VY+ D LD I
Sbjct: 2243 YVYWVDDSLDMI 2254
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 92/181 (50%), Gaps = 16/181 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ + ++ VE L +DWI +IYW D R I V +R + + N+ PR +++ P
Sbjct: 774 LAANRVEGVEDLCFDWISKNIYWTDPRYRSISVMRLADKSRRAIVQ-NLNNPRSIVVHPV 832
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD------ 256
G ++FWTDW +I R DGS+ I++T + WPNGL +D ++ R+Y+ D
Sbjct: 833 IG--YIFWTDWYRPAKIMRAWSDGSHAMPIVNTTLGWPNGLAIDWSSLRLYWVDAFFDKI 890
Query: 257 --SKLDFIDCKSLEIKTNVNYS---TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
S D +D ++LE + + + TIF + + G +++ K DG +I+
Sbjct: 891 EHSTFDGLDRRTLERISQMTHPFGLTIFGGYAYFTDWRLGGIVRVRKT--DGGEMTIIRR 948
Query: 312 G 312
G
Sbjct: 949 G 949
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 117/491 (23%), Positives = 186/491 (37%), Gaps = 126/491 (25%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEG---------PGCDLAECKHKFGLCSNTCHPTPLGALC 53
+RC+ ++C+ K DC +G+DE C E K G C PL +C
Sbjct: 3895 NRCIYSHELCNQKDDCGDGSDEKEEHCREPTPKPCTTEEFKCGNGNC------IPLHYVC 3948
Query: 54 T----CPPGEILSNDSVTCQDMNECEQPGYCSQMCTN-TKGSYICSCNEGYVL-EYDNHT 107
C G+ C + C CTN T+G +IC+C GY + + +
Sbjct: 3949 DNYDDC--GDHFDELGCNSGTGRTCTE-NICEHNCTNLTEGGFICTCRPGYRPNDLNRNN 4005
Query: 108 CKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD 167
C+ IN F G + + + +G
Sbjct: 4006 CEDINECDIF-----------------GTCPQVCQNTKGSYECFCAEGFRSVGDQ----- 4043
Query: 168 SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227
+ + C NG I+L DN+ R M ++D+ EN
Sbjct: 4044 ----QGKQCAANGNPPILLLPDNVRIRRYNMSSEQ-------YSDYIEN----------- 4081
Query: 228 NRSTIISTKIYW-PNGLTLDIA-----TRRVYFADSKLDFI-------DCKSLEIKTNVN 274
I + +W P G+ L + R F K +I + E+ N+
Sbjct: 4082 -EEHIQAIDYHWDPEGIGLSVVYYSILGRGSEFGSIKRAYIPTFESSGNNPVKEVDLNLR 4140
Query: 275 YST---------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLE 323
Y + R LYW D G N V + A +DG L+ QL + A+A++ +
Sbjct: 4141 YLVSPVGLAVDWVGRHLYWTDAGTNRVEV----AKLDGRYRKWLIYSQLDQPAAIAVNPK 4196
Query: 324 NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRV 382
G++Y WTDWG P+IE MDG R ++S + WP GL++D + R+
Sbjct: 4197 LGLMY-----------WTDWGRQPKIESAWMDGQQRQILVSEDLGWPTGLSIDYLNGDRI 4245
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPA-LALDLENGMLYY-ST 440
Y++D K + ++ +DGT R+ ++ +GV + +LD+ G LY+ S
Sbjct: 4246 YWSDQKENLVESMKFDGTDRKTIL---------------HGVSSPYSLDVFEGHLYWISK 4290
Query: 441 EGAEFLKTPLF 451
E E K F
Sbjct: 4291 ERGEVWKEDKF 4301
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 46/194 (23%)
Query: 218 RIERIGM-DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
RI I + G+ T++++ + P+G+ D RR+Y++D
Sbjct: 2441 RISYISIYSGTGNPTLVASDLGTPDGIAFDWMNRRLYYSD-------------------- 2480
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
++++ I +DGSN S++ A+ LD C
Sbjct: 2481 -------YLNQ-------TISSMAVDGSNRSVVARVPRPRAIVLD-----------PCQG 2515
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
+++WTDW + +IER + G+ R+ IIST + WPNGLTLD +++Y+AD+ L I+ +
Sbjct: 2516 YMYWTDWSTSAKIERATLGGNFRTAIISTNLVWPNGLTLDYEDQQLYWADASLQKIERSS 2575
Query: 397 YDGTGRQQVILIDL 410
G R+ +I L
Sbjct: 2576 ITGENREVIISTAL 2589
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 132/332 (39%), Gaps = 90/332 (27%)
Query: 78 GYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G C +C G + C+C G+ L DN TC ++F+++S +I LE
Sbjct: 2023 GVCQHLCLPVPGGLFSCACATGFRLNPDNRTCSPY---SSFVVVSMLSAIKGFSLETSDH 2079
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ G + + + G IYW D T+R+
Sbjct: 2080 SEAMVPMAGRGRNALH-VDVHMPSGFIYWCDF------------TSRV------------ 2114
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP--NGLTLDIATRRVYF 254
PS I +I DGS +I++ I G+ +D +YF
Sbjct: 2115 ----PSQNA-------------IRKIKPDGSYFRNVITSGIGLNGIRGIAIDWVADNLYF 2157
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
++ F+ +E+ + +T +R++ + K +D +
Sbjct: 2158 TNA---FVAETFIEV---LRLNTTYRRV-------------LLKTTID-----------M 2187
Query: 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
+ +D +N R+LFW D+G+NP+IER +D SNR+ ++S I P GL
Sbjct: 2188 PRHIVVDPKN-----------RYLFWADYGQNPKIERALLDCSNRTVLVSEGIVTPRGLA 2236
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+D +T VY+ D LD I ++DG G ++I
Sbjct: 2237 IDHSTGYVYWVDDSLDMIARISHDG-GEPEII 2267
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 145/356 (40%), Gaps = 76/356 (21%)
Query: 72 NECEQPGYCSQMCTNTKGS---YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILV 128
N C Q CS +C + Y C+C G++L D+ C + FLI + I
Sbjct: 1698 NFCAQSA-CSHLCLLSSSGPRFYSCACPSGWILSPDHVNCMRVEE--PFLIAVRDNIIYG 1754
Query: 129 ADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS--RLNRIEVCDENGTNRIVL 186
L + K + A + ++G+ +D +YW+++ ++R++ +GTNR
Sbjct: 1755 ISLNPEEKTNDAM-VPIAGVQNGYDADFDDSEQMVYWVENPGEIHRVK---SDGTNRTTF 1810
Query: 187 AKDN-ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGM-----DGSNRSTII-----ST 235
A I P G+ +D W+ + NP + I + + R T+I S+
Sbjct: 1811 APAAVIGTPVGLAVD------WISGNLYYSNPNTQSIEVLKLRSEVIYRKTLITNDGTSS 1864
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
P GLT+D ++Y+ D D +GVP K
Sbjct: 1865 GSGKPIGLTVDPINGKLYWTDQGTD-----------------------------SGVPAK 1895
Query: 296 IGKANMDGSNASILVSGQLYEA--LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
I ANMDGS+ L +G L + +D++ LY+S IER
Sbjct: 1896 IASANMDGSDIRTLFTGNLDHVGFITIDIKEQKLYWSV------------SSTGVIERGN 1943
Query: 354 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
+DG+NR T++ + P G+ + +Y+ D + I+ + TG +V+L D
Sbjct: 1944 VDGTNRMTVV-VHLSRPWGVA--VYGSYLYYTDRDYEVIERVD-KATGANKVVLRD 1995
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
++FWTDW +I R DGS+ I++T + WPNGL +D ++ R+Y+ D+ D I+
Sbjct: 835 YIFWTDWYRPAKIMRAWSDGSHAMPIVNTTLGWPNGLAIDWSSLRLYWVDAFFDKIEHST 894
Query: 397 YDGTGRQQVILIDLMVE 413
+DG R+ + I M
Sbjct: 895 FDGLDRRTLERISQMTH 911
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 130/316 (41%), Gaps = 28/316 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLAKDNITQPRGMMLD 200
IV S + GL+ D+ +Y+ D+ L+ I+ CD NG NR +V + + P + L
Sbjct: 1588 IVSSKIYWPNGLSIDYPNKLLYFADAYLDYIDFCDYNGNNRRQVVASDLVLRHPHALTL- 1646
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
+++WTD + I +G N++ +I + P G+T I + D+
Sbjct: 1647 ---FEDFVYWTDRYTHRVIRANKWNGRNQTVLI-YNVNQPLGITA-IHPVKQPAGDNFCA 1701
Query: 261 FIDCKSLEI--KTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
C L + + + + WI + +++ + + +I+ L
Sbjct: 1702 QSACSHLCLLSSSGPRFYSCACPSGWILSPDHVNCMRVEEPFLIAVRDNIIYGISLNPEE 1761
Query: 319 ALD--------LENGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTIISTKIYW 369
+ ++NG Y + + + + W ENP I R+ DG+NR+T +
Sbjct: 1762 KTNDAMVPIAGVQNG--YDADFDDSEQMVY--WVENPGEIHRVKSDGTNRTTFAPAAVIG 1817
Query: 370 -PNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALA 428
P GL +D + +Y+++ I+ R +VI ++ G L
Sbjct: 1818 TPVGLAVDWISGNLYYSNPNTQSIEVLKL----RSEVIYRKTLITNDGTSSGSGKPIGLT 1873
Query: 429 LDLENGMLYYSTEGAE 444
+D NG LY++ +G +
Sbjct: 1874 VDPINGKLYWTDQGTD 1889
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 105/268 (39%), Gaps = 59/268 (22%)
Query: 28 CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCS------ 81
C + C H L S+ P C CP G ILS D V C + E+P +
Sbjct: 1700 CAQSACSHLCLLSSSG----PRFYSCACPSGWILSPDHVNCMRV---EEPFLIAVRDNII 1752
Query: 82 -------QMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK 134
+ TN I GY ++D+ +V +E
Sbjct: 1753 YGISLNPEEKTNDAMVPIAGVQNGYDADFDDS------------------EQMVYWVENP 1794
Query: 135 GKDHRAQD--------IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC---DENGTNR 183
G+ HR + + + GLA DWI G++Y+ + IEV E +
Sbjct: 1795 GEIHRVKSDGTNRTTFAPAAVIGTPVGLAVDWISGNLYYSNPNTQSIEVLKLRSEVIYRK 1854
Query: 184 IVLAKDNIT----QPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRSTIIST 235
++ D + +P G+ +DP G L+WTD G + +I MDGS+ T+ +
Sbjct: 1855 TLITNDGTSSGSGKPIGLTVDPINGK--LYWTDQGTDSGVPAKIASANMDGSDIRTLFTG 1912
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFID 263
+ +T+DI +++Y++ S I+
Sbjct: 1913 NLDHVGFITIDIKEQKLYWSVSSTGVIE 1940
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
D KS +N++ IF Y++ DG + S+++ G L +ALD
Sbjct: 3188 DGKSCRQNSNISPYLIFSNRYYLR-----------NLTTDGQSYSLILQG-LRNVVALDF 3235
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+ + + L+W D G IER+ +G+++ TIIS + G+ +D R++
Sbjct: 3236 D---------RVEKRLYWIDVGRK-VIERMFFNGTSKETIISDGVPSGEGIAVDWVGRKL 3285
Query: 383 YFADSKLDFIDFCNYDGTGRQQVI 406
Y+ D D + DG R+++I
Sbjct: 3286 YWVDDSKDCLYVSELDGRFRKKLI 3309
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK-DNITQPRGM 197
A IV + L GLA DW +YW+D+ ++IE +G +R L + +T P G+
Sbjct: 856 HAMPIVNTTLGWPNGLAIDWSSLRLYWVDAFFDKIEHSTFDGLDRRTLERISQMTHPFGL 915
Query: 198 MLDPSPGTRWLFWTDW 213
+ + ++TDW
Sbjct: 916 TIFGG----YAYFTDW 927
>gi|432098390|gb|ELK28190.1| Low-density lipoprotein receptor-related protein 2 [Myotis davidii]
Length = 4330
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 167/532 (31%), Positives = 249/532 (46%), Gaps = 98/532 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNLT VCDG DCPNG DE P C+ C + C++ C P GA C CP G +L+ND
Sbjct: 1195 CVNLTAVCDGVPDCPNGTDESPLCNQESCSNLNAGCTHQCVQGPFGAQCLCPLGYLLAND 1254
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++EC+ PG+CSQ C NT+GS+ C C++ Y+L+ D TCK + L++++++
Sbjct: 1255 SKTCEDIDECDNPGFCSQHCYNTRGSFRCWCDKEYMLDTDGKTCKVTASESLLLLVASQN 1314
Query: 125 SIL----------VADLEEKGKDHRAQD------------------------------IV 144
I+ + L E G A D ++
Sbjct: 1315 QIIADNITSQVHNIYALIEGGSHIVAVDFDSVSGRVFWSDGTQGKIWSAFQNGTDRKLVL 1374
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
SG + E L DW+G ++YW + L IEV +G++R VL +N+T PRG+ LDP
Sbjct: 1375 DSGTTMTESLVVDWVGRNLYWTNYALQTIEVSKLDGSHRTVLISENVTMPRGLALDPRLS 1434
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID- 263
+FW+DWG +PRIER MDGS+R+ I+ KI WPNGLT+D R +YF D+ LD++D
Sbjct: 1435 EHLMFWSDWGHHPRIERASMDGSSRTVIVQDKILWPNGLTIDYPNRLLYFLDAYLDYLDF 1494
Query: 264 ------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGV------------------- 292
L ++ + +YW D V
Sbjct: 1495 CDYDGQHRRQVIASDLILRHPYALTVFEDSVYWTDRATEQVTQANKWHGGQHSIVIYNVH 1554
Query: 293 -PLKI-----GKANMDGSNASILVSGQLYEALALDLE----NGMLYYSTLKCTRWLFWTD 342
PL I K D I V + ++L+ E + M+ S ++ + + D
Sbjct: 1555 QPLGIVAVHPAKQPNDDQPFLITVRRSVIFGISLNPEVKSNDAMVPISGIQNGYDVEFDD 1614
Query: 343 ------WGENP-RIERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLDFIDF 394
W ENP I R+ DG+NR+ + + + L LD +R +Y+ + I+
Sbjct: 1615 TEEFIYWVENPGEIHRVKTDGTNRTVFVPLSSLGASMSLALDWISRNLYYTNPGTQSIEV 1674
Query: 395 CNYDGTGRQQVILIDLMVEFTND--LMGDNGVPALALDLENGMLYYSTEGAE 444
G R + LI TND +G + +D NG LY+S +G +
Sbjct: 1675 LTLRGDVRYRKTLI------TNDGTALGVGFPVGITVDPANGKLYWSDQGTD 1720
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/344 (33%), Positives = 179/344 (52%), Gaps = 65/344 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-----CDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+C+ +TKVCDG DCP+G DEG CD++ C F C CH P G C CPPG
Sbjct: 228 KCIPMTKVCDGILDCPSGEDEGNATALRPCDVSLCP--FLSCEYQCHMAPFGGACYCPPG 285
Query: 59 EIL-SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA-A 116
++ N++ C D ++C+ G C QMC + G + C C EGY+LE++ H CKA S A
Sbjct: 286 YVVDQNNTRKCVDFDDCQVWGVCDQMCEDRVGHHQCHCAEGYILEHERH-CKANTSSGEA 344
Query: 117 FLIISNRHSILVADLEEKG------KDHRA------------------------------ 140
+I SN +L+ D+ + HR
Sbjct: 345 SVIFSNGRDLLIGDIHGRSFEVLVESQHRGVAVGVDFHYHLQRIFWTDTVLDTVFSANIH 404
Query: 141 ----QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++I+ +D E LA DWI +Y +++++NRI++ + +G++R++L +N+ PRG
Sbjct: 405 DLDPEEIINVSIDDPENLAVDWINNKLYMVETKVNRIDMANLDGSHRVILITENLGHPRG 464
Query: 197 MMLDPSPGTRWLFWTD---WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
+ LDP+ G +LF++D + P +ER MDG+NR ++ TK+ WP G+TLD+ +RVY
Sbjct: 465 IALDPTVG--YLFFSDLDSFSGGPTVERAFMDGTNRKDLVKTKLGWPAGITLDLVLKRVY 522
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
+ DS+ D+I+ V Y RK + GG+ +P G
Sbjct: 523 WVDSRFDYIE--------TVTYDGTQRKT--VLHGGSRIPHPFG 556
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/410 (30%), Positives = 184/410 (44%), Gaps = 98/410 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHK-FGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ + KVC+ DC + +DE GC + EC +C + C T C+C PG L +
Sbjct: 2872 CIEMVKVCNHLDDCLDNSDEK-GCGINECNDPTLSVCDHNCTDTLTSFYCSCRPGYKLMS 2930
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC E P CSQ C NT GSYIC C GY+ E D +C+ ++ +LI SN
Sbjct: 2931 DKRTCGDIDECKETPFVCSQKCENTMGSYICKCAPGYIREPDGKSCRQNSNIEPYLIFSN 2990
Query: 123 RH------------SILV--------------------ADLEEK-------GKDHRAQDI 143
R+ S+++ D+E+ K +R + I
Sbjct: 2991 RYYLRNLTIDGSFYSLILQGLGNAVALDFDRVEKRLYWVDIEKSIIERMFLNKTNR-ETI 3049
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIV---LAKDN---ITQPR 195
L VE LA DW+ +YW+D+ L + V D +G R+V L +N + PR
Sbjct: 3050 TKHKLPGVESLAVDWVARKLYWVDAYLKCLSVSDLDGRYHRRLVEHCLDANNTFCLDNPR 3109
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G++L P G +++W DW I R+GMDG N+S IISTKI WPNGLT+D R+Y+A
Sbjct: 3110 GIVLHPQYG--YVYWGDWTRRAYIGRVGMDGVNKSVIISTKIAWPNGLTIDYTNDRLYWA 3167
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ L +I+ LE G N + G L
Sbjct: 3168 DAHLGYIEYSDLE----------------------------------GQNRHTVYDGTLS 3193
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ + +Y WTDW + DGS+R +++T
Sbjct: 3194 HPFAITIFEDTIY-----------WTDWNTRTVEKGNKYDGSDRMVLVNT 3232
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 144/275 (52%), Gaps = 21/275 (7%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTC-HPTPLGALCTCPPGEIL 61
+C++ CD DC + +DE GC+ + + LC C + G +C+C PG
Sbjct: 3724 QCISQHLACDDVDDCGDQSDET-GCNKGKERSCAENLCEQNCTQLSEGGFICSCRPGFKA 3782
Query: 62 S-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH--TCKA-------- 110
S +D +C D+NECEQ C Q C NTKGSY C C EG+ H C+A
Sbjct: 3783 SISDRNSCDDINECEQFATCPQHCQNTKGSYECYCAEGFRFFSGIHGNRCEADGVIYYTV 3842
Query: 111 INHSAAFLIISNRHSILVADLEEKGKDH-RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
+ H + F I + + + E +H + D+ + + +GLA DW+G HIYW D+R
Sbjct: 3843 LGHGSNFGAIKRAY---IPNFESGSNNHVQVIDLGLKYIMQPDGLAVDWVGRHIYWSDAR 3899
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
RIEV +G R L + QP ++++P G ++WTDWG+ P+IE MDG +R
Sbjct: 3900 SQRIEVAKLDGRYRKWLITTQLDQPAAVVVNPKLGL--MYWTDWGKEPKIESAWMDGQHR 3957
Query: 230 STIISTKIYWPNGLTLD-IATRRVYFADSKLDFID 263
S ++ + WP GL++D + R+Y++D K I+
Sbjct: 3958 SILVREDLGWPTGLSIDYLNNDRIYWSDFKEKTIE 3992
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 122/268 (45%), Gaps = 61/268 (22%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C QMC G + C+C G+ L D+ TC ++F+++S + HS
Sbjct: 1856 CQQMCLPVPGGLFSCACATGFKLNPDHQTCSPY---SSFIVVSMLSAIRGFSLDLSDHSE 1912
Query: 127 LVADLEEKGKDHRAQDIVVS-------------------------------------GLD 149
+ + +G++ D+ VS G +
Sbjct: 1913 AMVPVAGQGRNALHVDVDVSSGFIYWCDFSISEKSNNAIRRIKPNGSSFTNIITQGIGEN 1972
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ ++Y++++ + IEV N T R VL + + PR +++DP R+
Sbjct: 1973 GVRGIAVDWVAENLYFINAFESESLIEVLRINTTYRRVLLRVIVDMPRDIVVDPK--NRY 2030
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF---IDC 264
LFW D+G+NP+IER +D +NR+ ++S I P G+ +D + VY+ D LD ID
Sbjct: 2031 LFWADYGQNPKIERAFLDCTNRTVLVSEGIVTPRGVAVDHSNGYVYWVDDTLDVISRIDI 2090
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
+ E+K + Y + + Y I GN +
Sbjct: 2091 EGKELKV-IRYGSRYPTPYAITVFGNSI 2117
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 102/193 (52%), Gaps = 19/193 (9%)
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
R+ +VVS + +G+A+DWI IY+ D I E+G+ R V+A ++T+PR ++
Sbjct: 2283 RSPTVVVSDIGTTDGIAFDWINRRIYYSDYTNQTINSMAEDGSQRAVIA--HVTKPRAVV 2340
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
LDP G +++W+ W N +IER + G+ R ++++ + WP GLT+D +Y+AD+
Sbjct: 2341 LDPCGG--YIYWSSWAPNAKIERATVGGNFREPVVNSSLVWPCGLTVDHEEDLLYWADAS 2398
Query: 259 LDFIDCKSLE-IKTNVNYSTIFRK---------LYWIDEGGNGVPLKIGKAN-MDGSNAS 307
L I+ +L+ + V TI R +YW D KI + N DGS +
Sbjct: 2399 LRKIERSTLKGTEREVIVITILRPFGLTINGQYIYWTDWSTR----KIYRVNKYDGSGQT 2454
Query: 308 ILVSGQLYEALAL 320
+ + + +++
Sbjct: 2455 AMTTSFPFRLMSV 2467
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 121/289 (41%), Gaps = 55/289 (19%)
Query: 74 CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF----------LIISNR 123
CEQ S N Y C C G+ L+ D H C A+ F IS +
Sbjct: 620 CEQVCVLSHRTDNDGLGYRCKCTFGFNLDVDGHRCVAVKQFLIFSSEVAVRGIPFTISTQ 679
Query: 124 HSILVA-------------DLEEK---------------GKDHRAQDIVVSG-LDLVEGL 154
++V D +EK D ++I+ + ++ VE L
Sbjct: 680 EDVIVPVTGNPSFFVGIDFDAQEKTLFFSDTSVDMIYKQKIDGTGREILTANRVESVESL 739
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
+DWI ++YW D + V +R + + N+ PR +++ P G ++F+TDW
Sbjct: 740 TFDWISKNLYWTDLSYRSVSVMRLADKSRREIIR-NLNNPRSIVVHPIAG--YIFFTDWF 796
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKS-------- 266
+I R DGSN I++T + WPNGL +D R+Y+ D+ D I+ +
Sbjct: 797 RPAKIMRAWGDGSNLLPIVNTTLGWPNGLAIDWGALRLYWVDALFDKIEHSTFDGLDRRV 856
Query: 267 ---LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
++ T+ T+F+ + + G +++ K DG +++ SG
Sbjct: 857 LGHIQQMTHPFGLTVFQDYVFFTDWRLGAIVRVRKT--DGGEMTVIRSG 903
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 18/131 (13%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ R +YW D +I A +DG L++ QL + A+ ++ + G++Y
Sbjct: 3889 VGRHIYWSDARSQ----RIEVAKLDGRYRKWLITTQLDQPAAVVVNPKLGLMY------- 3937
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDF 394
WTDWG+ P+IE MDG +RS ++ + WP GL++D + R+Y++D K I+
Sbjct: 3938 ----WTDWGKEPKIESAWMDGQHRSILVREDLGWPTGLSIDYLNNDRIYWSDFKEKTIET 3993
Query: 395 CNYDGTGRQQV 405
YDGT R+ V
Sbjct: 3994 IKYDGTDRRIV 4004
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 133/343 (38%), Gaps = 97/343 (28%)
Query: 75 EQPGYCSQMCTNTKGSYI--CSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE 132
E G C +C G + CSC G L++D +C + FLI + +S+ L
Sbjct: 2175 ENNGGCPHLCFAMPGLHTPNCSCVFG-TLDHDGKSC--VIPKENFLIFALENSL--GSLH 2229
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
+DH +S +GGH+ LD ++ NRI ++
Sbjct: 2230 LDPEDHSLPFQAIS------------VGGHVMALDY---------DSIDNRIYFTRN--- 2265
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS-TIISTKIYWPNGLTLDIATRR 251
L+ S G +I I ++ RS T++ + I +G+ D RR
Sbjct: 2266 ------LEASHG-------------QISYINLNSGIRSPTVVVSDIGTTDGIAFDWINRR 2306
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+Y++D TN I DGS +++
Sbjct: 2307 IYYSD-------------YTN---------------------QTINSMAEDGSQRAVIAH 2332
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
A+ LD C +++W+ W N +IER + G+ R ++++ + WP
Sbjct: 2333 VTKPRAVVLD-----------PCGGYIYWSSWAPNAKIERATVGGNFREPVVNSSLVWPC 2381
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
GLT+D +Y+AD+ L I+ GT R +VI+I ++ F
Sbjct: 2382 GLTVDHEEDLLYWADASLRKIERSTLKGTER-EVIVITILRPF 2423
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 27/185 (14%)
Query: 242 GLTLDIATRRVYFADSKLDFI-----DCKSLEIKT--------NVNYSTIFRKLYWIDEG 288
G+ D + ++F+D+ +D I D EI T ++ + I + LYW D
Sbjct: 695 GIDFDAQEKTLFFSDTSVDMIYKQKIDGTGREILTANRVESVESLTFDWISKNLYWTDLS 754
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
V + D S I+ + ++ + G ++F+TDW +
Sbjct: 755 YRSVSVM---RLADKSRREIIRNLNNPRSIVVHPIAG-----------YIFFTDWFRPAK 800
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I R DGSN I++T + WPNGL +D R+Y+ D+ D I+ +DG R+ + I
Sbjct: 801 IMRAWGDGSNLLPIVNTTLGWPNGLAIDWGALRLYWVDALFDKIEHSTFDGLDRRVLGHI 860
Query: 409 DLMVE 413
M
Sbjct: 861 QQMTH 865
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 100/240 (41%), Gaps = 54/240 (22%)
Query: 213 WGENP-RIERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DG+NR+ + + + L LD +R +Y+ + I+ L ++
Sbjct: 1621 WVENPGEIHRVKTDGTNRTVFVPLSSLGASMSLALDWISRNLYYTNPGTQSIE--VLTLR 1678
Query: 271 TNVNYSTIFRKLYWIDEG---GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGML 327
+V Y RK ++G G G P+ I +D NG L
Sbjct: 1679 GDVRY----RKTLITNDGTALGVGFPVGI----------------------TVDPANGKL 1712
Query: 328 YYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 387
Y+S TD G +I MDG++ T+ + + LTLDI +++Y+A +
Sbjct: 1713 YWSDQG-------TDSGVPAKIASAHMDGTSPKTLFTGDLEHLEFLTLDIEDQKLYWAVT 1765
Query: 388 KLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I+ N DGT R ++L++ + + + LYY+ E E ++
Sbjct: 1766 SRGVIERGNVDGTNR--MVLVNYLSH------------PWGIAVYGSFLYYTDEHYEVIE 1811
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 25/176 (14%)
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
D KS +N+ IF Y++ +DGS S+++ G L A+ALD
Sbjct: 2972 DGKSCRQNSNIEPYLIFSNRYYLR-----------NLTIDGSFYSLILQG-LGNAVALDF 3019
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+ + + L+W D E IER+ ++ +NR TI K+ L +D R++
Sbjct: 3020 D---------RVEKRLYWVDI-EKSIIERMFLNKTNRETITKHKLPGVESLAVDWVARKL 3069
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYY 438
Y+ D+ L + + D GR L++ ++ N DN + L + G +Y+
Sbjct: 3070 YWVDAYLKCLSVSDLD--GRYHRRLVEHCLDANNTFCLDNPR-GIVLHPQYGYVYW 3122
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 21/152 (13%)
Query: 131 LEEKGKDHRAQD--------IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
+E G+ HR + + +S L LA DWI ++Y+ + IEV G
Sbjct: 1622 VENPGEIHRVKTDGTNRTVFVPLSSLGASMSLALDWISRNLYYTNPGTQSIEVLTLRGDV 1681
Query: 183 R---IVLAKDN----ITQPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRST 231
R ++ D + P G+ +DP+ G L+W+D G + +I MDG++ T
Sbjct: 1682 RYRKTLITNDGTALGVGFPVGITVDPANGK--LYWSDQGTDSGVPAKIASAHMDGTSPKT 1739
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+ + + LTLDI +++Y+A + I+
Sbjct: 1740 LFTGDLEHLEFLTLDIEDQKLYWAVTSRGVIE 1771
>gi|326922793|ref|XP_003207629.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Meleagris gallopavo]
Length = 4696
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 140/369 (37%), Positives = 200/369 (54%), Gaps = 57/369 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+KVCD DCPNGADE P C+ C C++ C P GA CTCP G L+ND
Sbjct: 1362 CVNLSKVCDNSADCPNGADESPLCNQESCSDNNAGCTHECIQGPFGAQCTCPVGYQLAND 1421
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D+NEC+ PG+CSQ C N +GS+ C C+EGY+LE + TCK L++++R+
Sbjct: 1422 SKTCEDINECDPPGFCSQHCYNERGSFRCYCDEGYILETNGRTCKVAESGNLILLVASRN 1481
Query: 125 SILVADLEEKG-------KDHR-------------------AQD--------------IV 144
I+V ++ + +D R QD +
Sbjct: 1482 QIVVDNITSQSHSIYSLIRDGRNIVAIDFDSISDRIFWSDTTQDKIWSAYQNGTDRKIVF 1541
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
SG+ + E +A DW+G ++YW D L IEV +G++R VL +N+T PRG++LDP
Sbjct: 1542 DSGVTVTESIAVDWVGRNLYWTDFVLETIEVSKMDGSHRTVLISENVTNPRGLVLDPRID 1601
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID- 263
+FWTDWG++PRIE+ MDG R+ II++KIYWPNGL +D + +YFAD+ LD+ID
Sbjct: 1602 AHVMFWTDWGQSPRIEKASMDGKFRTVIINSKIYWPNGLCIDYPNKLLYFADAYLDYIDF 1661
Query: 264 -----------CKSLEIKTNVNYSTIFRK-LYWIDEGGNGVPLKIGKANMDGSNASILVS 311
S I + + TIF +YW D N V I G N ++++
Sbjct: 1662 CDYNGNNRRQVVASDLILQHPHALTIFEDFVYWSDRYTNRV---IRANKWHGGNQTVMIY 1718
Query: 312 GQLYEALAL 320
+++ L L
Sbjct: 1719 -NIHQPLGL 1726
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 142/478 (29%), Positives = 220/478 (46%), Gaps = 106/478 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
C+ + KVCDG DCP G DE G C++++C C CH +P G +C CP G
Sbjct: 315 HCIPIGKVCDGTADCPAGEDETNITAGRHCNISQCAAL--SCQYRCHSSPSGGMCYCPAG 372
Query: 59 -EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I SNDS TC D ++C+ G C Q+C + G + C C EGY LE+ H + A
Sbjct: 373 YTISSNDSRTCIDFDDCKMWGVCDQLCEDRVGHHQCHCVEGYFLEHHRHCRANTSAGVAS 432
Query: 118 LIISNRHSILVADLEEK---------------GKD-----HR------AQDIVVS----- 146
+I SN +L+ DL + G D HR QD V S
Sbjct: 433 IIFSNGRDLLIGDLHGRNFRTLVQSQNRGVAVGVDFHFYLHRIFWTDTVQDKVFSITIDG 492
Query: 147 ---------GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+D E LA DWI +Y +++ ++RI++ + +GTNR+ L +N+ PRG+
Sbjct: 493 SDFQEVLNVSVDTPENLAVDWINNKLYVVETSVDRIDMVNLDGTNRVTLIAENLGNPRGI 552
Query: 198 MLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
LDP+ G +LF++DW +P++ER MDG+NR ++ TK+ WP G+TLDI ++R+Y+
Sbjct: 553 ALDPTVG--YLFFSDWDSLSGDPKVERAFMDGTNRQDLVKTKLGWPAGITLDIVSKRLYW 610
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
DS+ D+I+ V Y + R+ I GG+ +P G L
Sbjct: 611 VDSRFDYIE--------TVTYDGLQRRT--IAHGGSLIPHPYGIT--------------L 646
Query: 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
+E +++TDW + ++ SN I + + P G+T
Sbjct: 647 FE-------------------HNVYFTDWTKMAVVKANKFSESNPQVIYQSSLR-PYGVT 686
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLE 432
+ A R+ Y + C + G +Q+ ++ + ND +G L DL
Sbjct: 687 VYHAARQPYVRNP-------CGNNNGGCEQICVLSHKTD--NDGLGYRCRCILGFDLH 735
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 177/414 (42%), Gaps = 106/414 (25%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ + KVC+ DC + +DE GC + EC C + C T C+C PG L +
Sbjct: 3124 CIEMAKVCNRLDDCLDNSDE-KGCGINECSDPSISGCDHDCMDTQTSFYCSCHPGYKLMS 3182
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC E P CSQ+C NT GSYIC C GY+ E D +C+ ++ + +LI SN
Sbjct: 3183 DKRTCDDIDECNETPSVCSQICENTAGSYICKCAPGYIREPDGKSCRQNSNISPYLIFSN 3242
Query: 123 RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
R+ L D ++ +++ GL V L +D + +YW+D IE NGTN
Sbjct: 3243 RYY-----LRNLTADGQSYSLILQGLRNVVALDFDRVEKRLYWIDVGRKVIERMFLNGTN 3297
Query: 183 RIVLAKDNI--------------------------------------------------- 191
+ + D++
Sbjct: 3298 KEAVISDDVPNGEGIAVDWVGRKLYWVDAYKDCLYVSELDGRFQKKLVDRCVDVNNTYCF 3357
Query: 192 TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
PR +++ P G ++WTDW + I R GMDG ++ IISTK+ WPNGLT+D +
Sbjct: 3358 QHPRAIVVHPKYGQ--VYWTDWADRAYIGRAGMDGKDKMVIISTKLEWPNGLTIDYTNDK 3415
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+Y+AD+ L++I+ +++DG + +
Sbjct: 3416 LYWADAHLNYIE----------------------------------YSDLDGHHRHTVYD 3441
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
G L A+ + +Y WTDW + DGS+R+ +++T
Sbjct: 3442 GTLPHPFAITIFEDTIY-----------WTDWNTRTVEKGNKYDGSDRTVLVNT 3484
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 164/381 (43%), Gaps = 93/381 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADE---GPG----CDLAECKHKFGLCSNTCHPTPLGALCTCPP 57
C+ L VCD DC + DE PG C C+H C+N + G +C+C P
Sbjct: 3977 CIPLHYVCDNYDDCGDHFDEMGCNPGTERTCAENICEHN---CTNL---SEGGFICSCRP 4030
Query: 58 GEILS-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY--VLEYDNHTCKAINHS 114
G S N+ +C D+NECE G C+Q C N+KGSY C C +G+ V + C A +
Sbjct: 4031 GYKASENNRNSCDDINECEIFGTCTQDCKNSKGSYECFCADGFKSVGDQQGKQCAANGNP 4090
Query: 115 AAFLI-------------------ISNRHSILVADLE--------------------EKG 135
L+ I N+ I D + + G
Sbjct: 4091 PLLLLPDNVRIRRYNISSEQYSDYIDNQERIQALDYDWDPEGIGLSVVYFSILAQGSQFG 4150
Query: 136 KDHRA--------QDIVVSGLDL-------VEGLAYDWIGGHIYWLDSRLNRIEVCDENG 180
RA ++ +DL +GLA DW+G H+YW D+ NRIEV +G
Sbjct: 4151 AIKRAYLPTFDSSRNNPTKEVDLNLRYVVNPDGLAVDWVGRHLYWTDAGTNRIEVAKLDG 4210
Query: 181 TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 240
R L + QP + ++P G ++WTDWG P+IE MDG R T++S + WP
Sbjct: 4211 RYRKWLIFSLLDQPAAIAVNPKRGL--MYWTDWGRQPKIECAWMDGQQRQTLVSEDLGWP 4268
Query: 241 NGLTLD-IATRRVYFADSKLDFIDCKSLE----------IKTNVNYSTIFRKLYWI---- 285
GL++D + R+Y++DSK + I+ + + + + LYWI
Sbjct: 4269 TGLSIDYLNNDRIYWSDSKENIIESMRHDGTDRTTVLHGVGSPYSLDVFEGHLYWIAKER 4328
Query: 286 ------DEGGNGVPLKIGKAN 300
D+ GNG +K+ N
Sbjct: 4329 GEVWKKDKFGNGEKVKVLTVN 4349
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 105/221 (47%), Gaps = 50/221 (22%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V S L +G+A+DWI +Y+ D I +G+NR V+A+ + +PR ++LDP
Sbjct: 2497 VVASDLGTPDGIAFDWINNRVYYSDYLNQTISSVAVDGSNRTVIAR--VPRPRAVVLDPC 2554
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDW N +IER + G+ R+ I+ST + WPNGLTLD +++Y+AD+ L
Sbjct: 2555 RG--YMYWTDWSSNAKIERATLGGNFRTPIVSTNLVWPNGLTLDYEEQQLYWADANLQ-- 2610
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
KI + + G+N ++VS L+ A+ L
Sbjct: 2611 --------------------------------KIERCTLTGTNREVIVSTALH-PFAMTL 2637
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+ +Y WTDW DGS++ +I
Sbjct: 2638 FDQHIY-----------WTDWNTRSIYRANKYDGSDQIVMI 2667
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 185/468 (39%), Gaps = 67/468 (14%)
Query: 33 CKHKFGLCSNTCHPTPLGAL-CTCPPGEILSNDSVTCQDMNE-------CEQPGYCSQMC 84
C + G+C C P P G C C G L+ D+ TC N G+ +
Sbjct: 2059 CSNNIGVCQQLCLPVPGGLFSCACATGFQLNPDNRTCSPYNSFVIVSMLSAIKGFSLETS 2118
Query: 85 TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL-IISNRHSILVADLEEKGKDHRAQDI 143
+++ + VL D H + F +S++++I ++ G R ++
Sbjct: 2119 DHSEAMVPLAGRGRNVLHVDVHMPSGFIYWCDFSSTVSSQNAI--RKIKPDGSYFR--NV 2174
Query: 144 VVSGL--DLVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMML 199
V +G+ + + G+A DW+ G++Y+ ++ L IEV N T R VL K I PR +++
Sbjct: 2175 VTNGIGRNGIRGIAIDWVAGNLYFTNAFLTETFIEVLRLNTTYRRVLLKTIIDMPRHIVV 2234
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP R+LFW D+G+NP+IER +D +NR+ ++S I P GL +D + +Y+ D L
Sbjct: 2235 DPK--NRYLFWADYGQNPKIERAFLDCTNRTVLVSEGIVTPRGLAIDHSNGNIYWVDDSL 2292
Query: 260 DFI-----DCKSLEI-KTNVNYSTIF------RKLYWID-----------EGGNGVPLKI 296
D I D +EI + Y T + + W+D E GN +
Sbjct: 2293 DMIARIQPDGGDVEIVRYGSRYPTPYGITVFGNSMIWVDRNLKKVFQASKEPGNTDQPTV 2352
Query: 297 GKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE-RIGM- 354
+ N++ + LD+ N S C+ F + P+ GM
Sbjct: 2353 IRDNINWLRDVTIYDSHFQSRSPLDVNNNPCLDSNGGCSHLCFALPDTQTPKCGCAFGML 2412
Query: 355 DGSNRSTIISTKIYW--------------PNGLTLDIATRRVYFADSKLDFIDFCNY--- 397
D + IST Y P + V LDF N
Sbjct: 2413 DSDGKRCTISTDDYLIFALENALRSIHLDPENHSPPFRAVNVLRTAVALDFDSINNRIYF 2472
Query: 398 -----DGTGRQQVILIDLMVEFTNDLMGDNGVP-ALALDLENGMLYYS 439
G GR I I + + D G P +A D N +YYS
Sbjct: 2473 TQSYPSGAGRISYISIYSGIGTPVVVASDLGTPDGIAFDWINNRVYYS 2520
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 123/482 (25%), Positives = 191/482 (39%), Gaps = 108/482 (22%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGP---------GCDLAECKHKFGLCSNTCHPTPLGALC 53
+RC+ ++C+ + DC +G+DE C E K G C PL +C
Sbjct: 3931 NRCIYSHELCNQEDDCGDGSDEKEEHCREPTPRPCTTEEFKCSNGNC------IPLHYVC 3984
Query: 54 TCPPGEILSNDSVTCQDMNE--CEQPGYCSQMCTN-TKGSYICSCNEGYVLEYDN-HTCK 109
D + C E C + C CTN ++G +ICSC GY +N ++C
Sbjct: 3985 DNYDDCGDHFDEMGCNPGTERTCAE-NICEHNCTNLSEGGFICSCRPGYKASENNRNSCD 4043
Query: 110 AINHSAAFLIISN-------RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGH 162
IN F + + AD + D + + +G + L
Sbjct: 4044 DINECEIFGTCTQDCKNSKGSYECFCADGFKSVGDQQGKQCAANGNPPLLLLP------- 4096
Query: 163 IYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI 222
+ R+ R + E ++ I DN Q R LD DW E I
Sbjct: 4097 ---DNVRIRRYNISSEQYSDYI----DN--QERIQALD----------YDWDP----EGI 4133
Query: 223 GMDGSNRSTIISTKIYWPNGLTLDIATRRVY---FADSKLDFIDCKSLEIKTNVNYST-- 277
G+ S + + A +R Y F S+ + L ++ VN
Sbjct: 4134 GLSVVYFSILAQGSQFG--------AIKRAYLPTFDSSRNNPTKEVDLNLRYVVNPDGLA 4185
Query: 278 ---IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTL 332
+ R LYW D G N +I A +DG L+ L + A+A++ + G++Y
Sbjct: 4186 VDWVGRHLYWTDAGTN----RIEVAKLDGRYRKWLIFSLLDQPAAIAVNPKRGLMY---- 4237
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKLDF 391
WTDWG P+IE MDG R T++S + WP GL++D + R+Y++DSK +
Sbjct: 4238 -------WTDWGRQPKIECAWMDGQQRQTLVSEDLGWPTGLSIDYLNNDRIYWSDSKENI 4290
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPA-LALDLENGMLYY-STEGAEFLKTP 449
I+ +DGT R V+ +GV + +LD+ G LY+ + E E K
Sbjct: 4291 IESMRHDGTDRTTVL---------------HGVGSPYSLDVFEGHLYWIAKERGEVWKKD 4335
Query: 450 LF 451
F
Sbjct: 4336 KF 4337
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 93/181 (51%), Gaps = 16/181 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ + ++ VE LA+DWI ++YW D R I V +R + + N+ PR +++ P
Sbjct: 815 LTANRVESVEDLAFDWISKNLYWTDPRYRSISVMRLADKSRRAIVQ-NLNNPRSIVVHPV 873
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD------ 256
G ++FWTDW +I R DGS+ I++T + WPNGL +D ++ R+Y+ D
Sbjct: 874 IG--YIFWTDWFRPAKIMRAWSDGSHGLPIVNTTLGWPNGLAIDWSSLRLYWVDAFFDKI 931
Query: 257 --SKLDFIDCKSLEIKTNVNYS---TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
S D +D ++LE + + TIF + + G +++ K+ DG +I+
Sbjct: 932 EHSTFDGLDRRTLERIAQMTHPFGLTIFGGYAYFTDWRLGGIVRVRKS--DGGEMTIIRR 989
Query: 312 G 312
G
Sbjct: 990 G 990
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 46/194 (23%)
Query: 218 RIERIGM-DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
RI I + G ++++ + P+G+ D RVY++D
Sbjct: 2482 RISYISIYSGIGTPVVVASDLGTPDGIAFDWINNRVYYSD-------------------- 2521
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
++++ I +DGSN +++ A+ LD C
Sbjct: 2522 -------YLNQ-------TISSVAVDGSNRTVIARVPRPRAVVLD-----------PCRG 2556
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
+++WTDW N +IER + G+ R+ I+ST + WPNGLTLD +++Y+AD+ L I+ C
Sbjct: 2557 YMYWTDWSSNAKIERATLGGNFRTPIVSTNLVWPNGLTLDYEEQQLYWADANLQKIERCT 2616
Query: 397 YDGTGRQQVILIDL 410
GT R+ ++ L
Sbjct: 2617 LTGTNREVIVSTAL 2630
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 147/349 (42%), Gaps = 77/349 (22%)
Query: 80 CSQMCTNTKGS---YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
CS +C + + C+C G++L DN C + H FLI + I L + K
Sbjct: 1746 CSHLCLLSSSGPLFFSCACPSGWMLSPDNRNCMRVEH--PFLIAVRDNIIYGISLNPEEK 1803
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS--RLNRIEVCDENGTNRIVLAKDN-ITQ 193
+ A + ++G+ + +D IYW+++ ++R+ +G+NR V A I
Sbjct: 1804 TNDAM-VPIAGVQNGVDVDFDDSEQMIYWVENPGEIHRVR---SDGSNRTVFAPAAVIGA 1859
Query: 194 PRGMMLDPSPGTRWLFWTDWGENP---RIERIGMDGS--NRSTII-----STKIYWPNGL 243
P G+ LD W+ + NP IE + + G R T+I S P GL
Sbjct: 1860 PIGLALD------WISANLYYSNPGTQSIEVLKLHGEVMYRKTLITNDGTSLGAGTPIGL 1913
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN-GVPLKIGKANMD 302
T+D A KLYW D+G + GVP K+ ANMD
Sbjct: 1914 TVDPAR------------------------------GKLYWTDQGTDSGVPAKVASANMD 1943
Query: 303 GSNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
GS IL +G L E + +D++ LY++ IE+ +DG+NR
Sbjct: 1944 GSGIQILFTGNLDHVEFITIDIKEQKLYWAVTS------------TGVIEKGNVDGTNRV 1991
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
T++ ++ + + + +Y+ D + I+ + TG +V+L D
Sbjct: 1992 TLV---VHLSHPWGIAVYDTFLYYTDRDYEVIERVD-KFTGANKVVLRD 2036
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 81/177 (45%), Gaps = 31/177 (17%)
Query: 252 VYFADSKLDFI-----DCKSLEIKT--------NVNYSTIFRKLYWIDEGGNGVPLKIGK 298
++F+D+ D I D EI T ++ + I + LYW D + +
Sbjct: 792 IFFSDTSRDMIYKQKTDGSGREILTANRVESVEDLAFDWISKNLYWTDPRYRSISV---- 847
Query: 299 ANMDGSNASILVSGQLYEALALDLEN--GMLYYSTLKCTRWLFWTDWGENPRIERIGMDG 356
+ ++ + A+ +L N ++ + + ++FWTDW +I R DG
Sbjct: 848 ---------MRLADKSRRAIVQNLNNPRSIVVHPVIG---YIFWTDWFRPAKIMRAWSDG 895
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
S+ I++T + WPNGL +D ++ R+Y+ D+ D I+ +DG R+ + I M
Sbjct: 896 SHGLPIVNTTLGWPNGLAIDWSSLRLYWVDAFFDKIEHSTFDGLDRRTLERIAQMTH 952
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 136/352 (38%), Gaps = 93/352 (26%)
Query: 78 GYCSQMCTNTKGSYICSCNEGY-VLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C + C + +L+ D C + N + D E
Sbjct: 2388 GGCSHLCFALPDTQTPKCGCAFGMLDSDGKRCTISTDDYLIFALENALRSIHLDPENHSP 2447
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS------RLNRIEVCDENGTNRIVLAKDN 190
RA +++ + + L +D I IY+ S R++ I + GT +V+A D
Sbjct: 2448 PFRAVNVLRTAV----ALDFDSINNRIYFTQSYPSGAGRISYISIYSGIGT-PVVVASD- 2501
Query: 191 ITQPRGMMLDPSPGTRWL----FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 246
+ P G+ D W+ +++D+ N I + +DGSNR+ I ++ P + LD
Sbjct: 2502 LGTPDGIAFD------WINNRVYYSDY-LNQTISSVAVDGSNRTVI--ARVPRPRAVVLD 2552
Query: 247 IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
R Y +YW D N KI +A + G+
Sbjct: 2553 PC--RGY----------------------------MYWTDWSSNA---KIERATLGGNFR 2579
Query: 307 SILVSGQLY--EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+ +VS L L LD E LY W D +IER + G+NR I+S
Sbjct: 2580 TPIVSTNLVWPNGLTLDYEEQQLY-----------WAD-ANLQKIERCTLTGTNREVIVS 2627
Query: 365 TKIYWPNGLTL--------DIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
T ++ P +TL D TR +Y A+ YDG+ Q+++I
Sbjct: 2628 TALH-PFAMTLFDQHIYWTDWNTRSIYRANK---------YDGS--DQIVMI 2667
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 25/177 (14%)
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
D KS +N++ IF Y++ DG + S+++ G L +ALD
Sbjct: 3224 DGKSCRQNSNISPYLIFSNRYYLR-----------NLTADGQSYSLILQG-LRNVVALDF 3271
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+ + + L+W D G IER+ ++G+N+ +IS + G+ +D R++
Sbjct: 3272 D---------RVEKRLYWIDVGRK-VIERMFLNGTNKEAVISDDVPNGEGIAVDWVGRKL 3321
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYS 439
Y+ D+ D + D GR Q L+D V+ N + A+ + + G +Y++
Sbjct: 3322 YWVDAYKDCLYVSELD--GRFQKKLVDRCVDVNNTYCFQHPR-AIVVHPKYGQVYWT 3375
>gi|303304950|ref|NP_001181916.1| low-density lipoprotein receptor-related protein 2 precursor [Danio
rerio]
gi|302176489|gb|ADK98421.1| low-density lipoprotein receptor-related protein 2 [Danio rerio]
Length = 4673
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/364 (40%), Positives = 191/364 (52%), Gaps = 61/364 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-----DLAECKHKFGLCSNTCHPTPLGALCTCPPGE 59
CVNL++VCD DCPNGADE P C D C C++ C P GA CTCP G
Sbjct: 1318 CVNLSRVCDNTPDCPNGADESPLCNEPLPDQESCSDNNAGCTHGCIQGPFGAQCTCPMGF 1377
Query: 60 ILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI 119
LSNDS TC+D++EC PG CSQ C N +GS+ C C +GY LE D TCKA A L+
Sbjct: 1378 QLSNDSKTCEDIDECHPPGVCSQHCFNERGSFRCHCQDGYTLEADARTCKASGSREALLL 1437
Query: 120 ISNRHSILVAD----------LEEKGKDHRAQD--------------------------- 142
+++R+ I+ D L G++ A D
Sbjct: 1438 VASRNQIISDDILAQPNAIRSLVRDGRNIVAVDFDSVTERIYWSDTTQDRIWSAHKNGTD 1497
Query: 143 ---IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
I SG+ + E LA DW+G ++YW D L IEV +G++R VL +N+T PRG+++
Sbjct: 1498 RTVIFDSGVTVTESLAVDWVGRNLYWTDYILETIEVSKLDGSHRTVLISENVTNPRGLVV 1557
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP T +FWTDWG NPRIER MDG R+TIIS K+YWPNGLT+D +YFAD+ L
Sbjct: 1558 DPRNNTHLMFWTDWGRNPRIERASMDGKLRTTIISNKLYWPNGLTIDYPNSLLYFADAYL 1617
Query: 260 DFIDCKSLEIKT------------NVNYSTIFRK-LYWIDEGGNGVPLKIGKANMDGSNA 306
DFID + K + + TIF +YW D N V I G N
Sbjct: 1618 DFIDYCDYDGKNRKQVLASDLVLQHPHAITIFEDFVYWTDRYVNRV---IRANKWHGQNQ 1674
Query: 307 SILV 310
S+++
Sbjct: 1675 SVML 1678
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 169/343 (49%), Gaps = 65/343 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGE 59
C+ +CDG CP+G DE G C + C C + CH +P G C CPPG
Sbjct: 271 CIPFDHLCDGTVHCPDGEDETNITAGRNCSIWRCASL--SCEHHCHASPDGGTCACPPGY 328
Query: 60 IL-SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL 118
++ +NDS +C D ++C G C Q+C + GS+ CSC +GY+LE + + L
Sbjct: 329 VINTNDSRSCMDYDDCSLWGMCDQLCEDRIGSHRCSCRDGYILEQHRYCRANPSSGVPSL 388
Query: 119 IISNRHSILVADLEEKGKD----------------------------------------H 138
I SN +L+AD+ G
Sbjct: 389 IFSNGRDLLIADVHGHGSQTLVQSQNRGAAVGVDFHYQLQRVFWTDTIQNKVFSVDMDGS 448
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
R Q ++ +D E LA DW+ +Y +++ +NRI++ D +G+NR+ L +++ PRG+
Sbjct: 449 RLQVVLNVSVDYPENLAVDWVNNKLYVVEASVNRIDMVDLDGSNRVTLIAEHLGNPRGLA 508
Query: 199 LDPSPGTRWLFWTDW----GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
LDP+ G +LF++DW GE P +ER MDG+NR II TK+ WP G+TLD+ +RVY+
Sbjct: 509 LDPTVG--YLFFSDWDTLNGE-PGLERAYMDGTNRYGIIRTKLGWPAGITLDLEAKRVYW 565
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
DS+ D+I+ Y + RK + GG+ +P G
Sbjct: 566 VDSRYDYIE--------TTTYDGLHRKT--VVHGGSVIPHPFG 598
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 193/408 (47%), Gaps = 95/408 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ ++VCD DC + +DE GC + EC C + C T +CTC PG L +
Sbjct: 3105 CLPQSQVCDRNDDCSDNSDEK-GCGINECTDPSMHHCDHNCTDTLTSFICTCRPGYRLMS 3163
Query: 64 DSVTCQDMNECE-QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D+ TC D++EC P CSQ+C NT GSY+C C G++ E D H+C+ ++ +LI SN
Sbjct: 3164 DNKTCDDIDECSVTPSVCSQVCENTLGSYVCKCAPGFLREPDGHSCRQNSNIHPYLIFSN 3223
Query: 123 RH--------------------SILVADLEEKGK-----------------DHRAQDIVV 145
R+ S++ D + K + ++ VV
Sbjct: 3224 RYYLRNLSTDGEAYSLILQGLSSVVALDFDRVDKRLYWIDVSRRVLERMFFNGTGREAVV 3283
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK----DNIT----QPRGM 197
+G+ EGLA DWIG +YW+DS L+ ++V + +G LA+ DN T PR +
Sbjct: 3284 NGVLHGEGLAVDWIGRKLYWVDSFLDCLKVSELDGRFVRKLAEHCVDDNHTYCFQNPRAV 3343
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+L P G +++WTDWGE I R+GMDG+N+S II+TKI WPNGLT+D ++Y++D+
Sbjct: 3344 VLHPKFG--YVYWTDWGERAFIGRVGMDGNNKSAIITTKIEWPNGLTIDYTNDKLYWSDA 3401
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
L++I+ +++DG + + G L
Sbjct: 3402 HLNYIE----------------------------------FSDLDGRHRHTVYDGVLPHP 3427
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ + LY WTDW + +GS R +++T
Sbjct: 3428 FAITVFEDTLY-----------WTDWNTRTVEKGNKYNGSGREMLVNT 3464
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 166/388 (42%), Gaps = 97/388 (25%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGA-LCTCPPG-EI 60
+C+ L CD DC + +DE GC + LC + C G +C+C PG +
Sbjct: 3956 QCIPLQYACDDYDDCEDQSDE-LGCYFGHGRSCSENLCEHNCTDLSAGGFICSCRPGYKP 4014
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY--VLEYDNHTCKAINHSAAFL 118
D TC+D++ECE G C Q+C NTKGSY C C EG+ V E C A + L
Sbjct: 4015 NPEDKNTCEDVDECEIYGTCPQLCKNTKGSYECFCAEGFRSVGEQPGVECAAEGNPPVLL 4074
Query: 119 IISN-----------RHSILVADLEE------------------------KGKDH----- 138
+ N ++S V + E +G D
Sbjct: 4075 LPDNVRIRRFNLSSAQYSDYVDNAEHIQALDYLWDPEGLGLSIVYWTVLGRGSDFGSIKR 4134
Query: 139 --------------RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
+ D+ + + +G+A DWIG HIYW D+ NRIEV +G R
Sbjct: 4135 AYMTTFDDHGNNPVKEVDLNLRYVSSPDGIAVDWIGRHIYWTDAGTNRIEVAKLDGRYRK 4194
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L +++ QP ++++PS G +FWTDWG PRIE MDG R ++ + WP GL
Sbjct: 4195 WLIHNDLDQPAAIVVNPSLGK--MFWTDWGRKPRIETAWMDGQQREVLLDEDLGWPTGLA 4252
Query: 245 LD-IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
LD + R+Y+ DSK + I+ +DG
Sbjct: 4253 LDYLNENRIYWCDSKENIIE----------------------------------SMKVDG 4278
Query: 304 SNASILVSGQLYEALALDLENGMLYYST 331
S+ I++SG + +LD+ G +Y++T
Sbjct: 4279 SDRQIIISGDIGHPYSLDVFEGHVYWTT 4306
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 105/220 (47%), Gaps = 50/220 (22%)
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
V S L +G+AYDWI IY+ D I +G+ R V+A+ + +PR +MLDP
Sbjct: 2461 VASDLGAPDGIAYDWINRRIYYSDYINQTISSMAVDGSQRTVVAQ--VPRPRAIMLDPCR 2518
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +++WTDWG + +IER + G+ R+ I++T + WPNGLTLD +R+Y+AD+ L
Sbjct: 2519 G--YMYWTDWGTSAKIERATLGGNFRTEIVNTSLVWPNGLTLDYDDQRLYWADASLQ--- 2573
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
KI + ++ G+N ++VS +Y A+ +
Sbjct: 2574 -------------------------------KIERCSLTGTNREVIVSTAIY-PFAMTVY 2601
Query: 324 NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+ +Y WTDW DGS++ ++
Sbjct: 2602 DQHIY-----------WTDWNTRSIYRANKHDGSDQRVML 2630
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 121/480 (25%), Positives = 185/480 (38%), Gaps = 91/480 (18%)
Query: 33 CKHKFGLCSNTCHPTPLGAL-CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
C + G C C P P G C C G LS D+ TC Q M T KG
Sbjct: 2022 CSNNVGTCEQLCLPRPGGLFSCACATGFKLSADNRTCSPY----QSYVVISMLTAIKG-- 2075
Query: 92 ICSCNEGYVLEYDNHTCKAIN-------------HSAAFLIISNRHSILVAD------LE 132
+ LE +H+ + H A+ I S VA ++
Sbjct: 2076 -------FSLEGVDHSESMVPVAGRGRNALHVDVHMASSFIYWCDFSSTVASQNGIRRIK 2128
Query: 133 EKGKDHRAQDIVVSGL--DLVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAK 188
G R+ IV SG+ + + G+A DW G++Y+ ++ L IEV N T R VL K
Sbjct: 2129 PDGSGFRS--IVTSGIGRNGIRGIAVDWAAGNLYFTNAFLTETYIEVIRLNTTFRRVLLK 2186
Query: 189 DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248
+ PR +++DP R+LFW D+G+ P+IER +DGSNR+ ++S+ I P GL LD
Sbjct: 2187 TQVDMPRHIVVDPK--NRYLFWADYGQTPKIERAFLDGSNRTALVSSGIVTPRGLALDHR 2244
Query: 249 TRRVYFADSKLDFIDCKSLE------IKTNVNYSTIF------RKLYWIDE--------- 287
+Y+ D LD I E ++ Y T + + W+D
Sbjct: 2245 DGYIYWVDDSLDMIARVRPEGGETEVVRYGSRYPTPYGITVFEGNVIWVDRNLKKVFRAS 2304
Query: 288 ---GGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWG 344
G P I + N++ + ++ + A +L N S C + F
Sbjct: 2305 KQPGATDQPAVI-RDNINMLRDVTIFDRRMQPSSAHELNNNPCLESNGGCAHFCFAMAGA 2363
Query: 345 ENPRIERI--GMDGSNRSTIISTKIYW--------------PNGLTLDIATRRVYFADSK 388
+ + + + S ++S Y P+ +L V
Sbjct: 2364 QTRKCSCAFGNLAADDSSCVVSRDDYLIYTTESTVRSLRLDPDDHSLPFPVVNVPRTSVA 2423
Query: 389 LDF------IDFCNYDGTGRQQVILIDLMVEFT--NDLMGDNGVP-ALALDLENGMLYYS 439
LDF I F G G+ ++ I L + ++ D G P +A D N +YYS
Sbjct: 2424 LDFDRLDGRIYFTQSSGAGQSKISFITLASPTSPATEVASDLGAPDGIAYDWINRRIYYS 2483
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 109/251 (43%), Gaps = 48/251 (19%)
Query: 70 DMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR------ 123
D CE S N Y C C GY L D C A+ FL+ S++
Sbjct: 658 DRGGCEHICVLSHRTDNGGLGYRCRCRMGYDLHADGKRCVAVRQ---FLLFSSQLAVRGI 714
Query: 124 ------------------------------HSILVAD-----LEEKGKDHRAQDIVVSG- 147
+SI +D + ++ D ++++ +
Sbjct: 715 PFNLSTQEDIILPITGTPSYFVGVDFSAEDNSIFFSDTVKDIIYKQKVDGTGREVLAANR 774
Query: 148 LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
+D VE LAYDWI ++YW D R I V +R + + N+ PR +++ P G +
Sbjct: 775 VDGVEDLAYDWISKNLYWTDPRYRSISVMKVVDKSRRAIVR-NLNNPRSIVVHPVAG--F 831
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
+FWTDW +I R DGS+ +I++T + WPNGL +D + R+Y+ D+ D I+ +
Sbjct: 832 IFWTDWYRPAKIMRAWGDGSHAQSIVNTTLGWPNGLAIDWSAMRLYWVDAFFDKIEHSNF 891
Query: 268 EIKTNVNYSTI 278
+ + ++ I
Sbjct: 892 DGQNRLSLDRI 902
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 32/182 (17%)
Query: 242 GLTLDIATRRVYF------ADSKLDFIDCKS-----------LEIKTNVNYSTIFRKLYW 284
L D R+YF SK+ FI S L + Y I R++Y+
Sbjct: 2423 ALDFDRLDGRIYFTQSSGAGQSKISFITLASPTSPATEVASDLGAPDGIAYDWINRRIYY 2482
Query: 285 IDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWG 344
D + I +DGS +++ A+ LD C +++WTDWG
Sbjct: 2483 SDY----INQTISSMAVDGSQRTVVAQVPRPRAIMLD-----------PCRGYMYWTDWG 2527
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
+ +IER + G+ R+ I++T + WPNGLTLD +R+Y+AD+ L I+ C+ GT R+
Sbjct: 2528 TSAKIERATLGGNFRTEIVNTSLVWPNGLTLDYDDQRLYWADASLQKIERCSLTGTNREV 2587
Query: 405 VI 406
++
Sbjct: 2588 IV 2589
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 79/165 (47%), Gaps = 27/165 (16%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRW 337
I R +YW D G N +I A +DG L+ L + A+ + +
Sbjct: 4169 IGRHIYWTDAGTN----RIEVAKLDGRYRKWLIHNDLDQPAAIVVNPSLGK--------- 4215
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDFCN 396
+FWTDWG PRIE MDG R ++ + WP GL LD + R+Y+ DSK + I+
Sbjct: 4216 MFWTDWGRKPRIETAWMDGQQREVLLDEDLGWPTGLALDYLNENRIYWCDSKENIIESMK 4275
Query: 397 YDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTE 441
DG+ RQ +I GD G P +LD+ G +Y++T+
Sbjct: 4276 VDGSDRQIII------------SGDIGHP-YSLDVFEGHVYWTTK 4307
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 99/228 (43%), Gaps = 53/228 (23%)
Query: 213 WGENP-RIERIGMDGSNRSTIISTKIYW-PNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W E+P I R+ DG+NR+ I P GL LD ++ +Y+++ I + L +K
Sbjct: 1794 WVEHPGEIHRVKSDGTNRTEFAPAAILGSPVGLALDWMSQNLYYSNPSSQAI--EVLRLK 1851
Query: 271 TNVNYSTIF----------------------RKLYWIDEGG-NGVPLKIGKANMDGSNAS 307
+ Y K+YW D G +G+P K+ A+MDGSNA+
Sbjct: 1852 GEIQYRKTLITNNGSPTGAGAPVGIAVDPARGKMYWTDHGTESGIPAKVASADMDGSNAA 1911
Query: 308 ILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
IL + L E + +D+ LY++ IER DGSNR T++
Sbjct: 1912 ILFTHNLEHVEFITIDITENKLYWAVTG------------TGVIERGDPDGSNRITMV-- 1957
Query: 366 KIYWPNGLT----LDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
NGL+ + + +YF D + I+ + TG +V++ D
Sbjct: 1958 -----NGLSHPWGVAVYGSYLYFTDRDFEVIERVD-KATGLNRVVMRD 1999
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 248 ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP-LKIGKANMDGSNA 306
T R A +++D ++ ++ Y I + LYW D + +K+ +D S
Sbjct: 764 GTGREVLAANRVDGVE--------DLAYDWISKNLYWTDPRYRSISVMKV----VDKSRR 811
Query: 307 SILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 366
+I+ + ++ + G ++FWTDW +I R DGS+ +I++T
Sbjct: 812 AIVRNLNNPRSIVVHPVAG-----------FIFWTDWYRPAKIMRAWGDGSHAQSIVNTT 860
Query: 367 IYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
+ WPNGL +D + R+Y+ D+ D I+ N+DG R
Sbjct: 861 LGWPNGLAIDWSAMRLYWVDAFFDKIEHSNFDGQNR 896
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 31/194 (15%)
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRK-------- 281
+T +++ + P+G+ D RR+Y++D I +++ + + R
Sbjct: 2458 ATEVASDLGAPDGIAYDWINRRIYYSDYINQTISSMAVDGSQRTVVAQVPRPRAIMLDPC 2517
Query: 282 ---LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTR 336
+YW D G + KI +A + G+ + +V+ L L LD ++ LY
Sbjct: 2518 RGYMYWTDWGTSA---KIERATLGGNFRTEIVNTSLVWPNGLTLDYDDQRLY-------- 2566
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
W D +IER + G+NR I+ST IY + + + +Y+ D I N
Sbjct: 2567 ---WAD-ASLQKIERCSLTGTNREVIVSTAIY---PFAMTVYDQHIYWTDWNTRSIYRAN 2619
Query: 397 YDGTGRQQVILIDL 410
Q+V+L +L
Sbjct: 2620 KHDGSDQRVMLQNL 2633
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 84/218 (38%), Gaps = 57/218 (26%)
Query: 91 YICSCNEGYVLEYDNHTCKAINHSAAFLII----------------SNRHSILVADL--- 131
Y C+C G+ L D TC + FL++ SN + VA L
Sbjct: 1723 YSCACPSGWTLAADQFTCARV--EDPFLVVVRDSIIYGIPLNPNDKSNDAMVPVAGLLNG 1780
Query: 132 ---------------EEKGKDHRAQDIVVSGLDLVE--------GLAYDWIGGHIYWLDS 168
E G+ HR + + + GLA DW+ ++Y+ +
Sbjct: 1781 YDVDFDDAEQMIYWVEHPGEIHRVKSDGTNRTEFAPAAILGSPVGLALDWMSQNLYYSNP 1840
Query: 169 RLNRIEVCDENG--TNRIVLAKDNIT-----QPRGMMLDPSPGTRWLFWTDWGEN----P 217
IEV G R L +N + P G+ +DP+ G ++WTD G
Sbjct: 1841 SSQAIEVLRLKGEIQYRKTLITNNGSPTGAGAPVGIAVDPARGK--MYWTDHGTESGIPA 1898
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
++ MDGSN + + + + +T+DI ++Y+A
Sbjct: 1899 KVASADMDGSNAAILFTHNLEHVEFITIDITENKLYWA 1936
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 16/141 (11%)
Query: 135 GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK-DNITQ 193
G AQ IV + L GLA DW +YW+D+ ++IE + +G NR+ L + I+
Sbjct: 848 GDGSHAQSIVNTTLGWPNGLAIDWSAMRLYWVDAFFDKIEHSNFDGQNRLSLDRITQISH 907
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
P G+ + ++++TDW + DG TI G++ I + +
Sbjct: 908 PFGLTV----FGGYVYFTDWRLGGIVRVRKTDGGEMMTIR-------RGIS-HIMHVKSF 955
Query: 254 FADSKLDFIDCKSLEIKTNVN 274
ADS++ F C +TN N
Sbjct: 956 NADSQIGFNFCSR---QTNPN 973
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+IV + L GL D+ +YW D+ L +IE C GTNR V+ I P M +
Sbjct: 2544 EIVNTSLVWPNGLTLDYDDQRLYWADASLQKIERCSLTGTNREVIVSTAI-YPFAMTV-- 2600
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
+ ++WTDW DGS++ ++
Sbjct: 2601 --YDQHIYWTDWNTRSIYRANKHDGSDQRVML 2630
>gi|431894884|gb|ELK04677.1| Low-density lipoprotein receptor-related protein 2 [Pteropus alecto]
Length = 4395
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 167/532 (31%), Positives = 249/532 (46%), Gaps = 98/532 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCDG +DCPNG DE P C+ C + C++ C P GA C CP G +L+ND
Sbjct: 1154 CVNLSAVCDGVSDCPNGTDESPLCNQESCSNLNAGCTHQCVQGPFGAQCLCPSGYLLAND 1213
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++EC+ PG+CSQ C NT+GS+ C C++ Y+L+ D TCK + L++++++
Sbjct: 1214 SKTCEDIDECDTPGFCSQHCHNTRGSFRCWCDKEYMLDTDGKTCKVTASESLLLLVASQN 1273
Query: 125 SIL----------VADLEEKGKDHRAQD------------------------------IV 144
I+ V L E G A D +V
Sbjct: 1274 QIIADNITSHVHNVYALIEDGSRIVAVDFDSVGGRVFWSDGTEGKIWSALQNGTDKKVVV 1333
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
SG+ + E + DW+G ++YW + L IEV +G +R VL N++ PRG++LDP
Sbjct: 1334 DSGITMTESIVVDWVGRNLYWTNYVLQTIEVSKLDGNHRTVLISHNVSTPRGLVLDPRVS 1393
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID- 263
+FW +WG +PRIER MDGS R+ I+ K+ WPNGLT+D R +YF D+ LD++D
Sbjct: 1394 DHLMFWANWGHHPRIERASMDGSLRTVIVQDKVLWPNGLTIDYPNRLLYFLDAYLDYLDF 1453
Query: 264 ------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGV------------------- 292
L ++ + +YW D G V
Sbjct: 1454 CDYDGQHRHQVIAGDLIMRHPYALTLFEDSVYWTDRGTQKVTQANKWHGGNQSVVIYNVH 1513
Query: 293 -PLKI-----GKANMDGSNASILVSGQLYEALALDLE----NGMLYYSTLKCTRWLFWTD 342
PL I K D I V ++ ++L+ E + M+ S ++ + + D
Sbjct: 1514 QPLGIVAVHPAKQPTDDQPFLITVRRRVIFGISLNPEVKSNDAMVPISGVQNGYDVEFDD 1573
Query: 343 ------WGENP-RIERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLDFIDF 394
W ENP +I R+ DG+NR+ + + + L LD +R +Y+ S I+
Sbjct: 1574 SEEFIYWVENPGKIHRVKTDGTNRTVFVPLSNLGSSMSLALDWISRNLYYTSSGTQSIEV 1633
Query: 395 CNYDGTGRQQVILIDLMVEFTND--LMGDNGVPALALDLENGMLYYSTEGAE 444
G R LI TND +G + LD NG LY+S G +
Sbjct: 1634 LTLRGDVRYAKTLI------TNDGTALGVGFPVGITLDPANGKLYWSDHGTD 1679
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 180/410 (43%), Gaps = 98/410 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ + KVC+ DC + +DE GC + EC C C T C+C PG L +
Sbjct: 2873 CIEMVKVCNHLDDCSDNSDE-KGCGINECHDPSLSGCDQNCTDTLTSFYCSCRPGYKLMS 2931
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC E P CSQ C N GSYIC C GY+ E D +C+ ++ +LI SN
Sbjct: 2932 DKRTCSDIDECKETPFVCSQKCENVMGSYICKCAPGYIREPDGKSCRQNSNIEPYLIFSN 2991
Query: 123 R------------HSILVA--------------------DLEEK-------GKDHRAQDI 143
R +S+++ D+E+K K +R + I
Sbjct: 2992 RYYLRNLTIDGSFYSLILQGLGNAVALDFDRVEKRLYWIDIEKKIIERMFLNKTNR-ETI 3050
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPR 195
+ L E LA DW+G +YW+D+ LN + V + +G R LA+ + PR
Sbjct: 3051 MKHKLPATESLAVDWVGRKLYWVDAYLNCLSVSELDGRYRRKLAEHCLDANNTFCFDNPR 3110
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G+ L P G +++W DW I RIGMDG N+S IISTK+ WPNG+T+D +Y+A
Sbjct: 3111 GIALHPQYG--YVYWADWAHRAYIGRIGMDGINKSVIISTKLEWPNGITIDYTNDLLYWA 3168
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ L +I+ LE G + + G L
Sbjct: 3169 DAHLGYIEYSDLE----------------------------------GHHRHTVYDGTLS 3194
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ + +Y WTDW + DGS+R +++T
Sbjct: 3195 HPFAITIFEDTIY-----------WTDWNTKTVEKGNKYDGSDRMMLVNT 3233
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 165/337 (48%), Gaps = 61/337 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C N ++ CD K DC + +DE C ++F S C +C P +D
Sbjct: 157 CYNASQRCDQKVDCRDYSDED-NCTEPCSHNQFQCGSGEC--LTRNYICDHIPDCEDGSD 213
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA-AFLIISNR 123
+C + ++C+ G C QMC + G + C C EGY+LE++ H CKA S A +I S+
Sbjct: 214 EHSC-NFDDCQIWGICDQMCEDRIGHHQCHCAEGYILEHERH-CKANTSSGEASVIFSHG 271
Query: 124 HSILVADLEEK---------------GKDHR-------------------------AQDI 143
+L+ D+ + G D Q++
Sbjct: 272 QDLLIGDIHGRSFEVLVESQNRGVAVGVDFHYHLQRVFWTDTVKDKVFSVGINGLDIQEV 331
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ +D E LA DW+ +Y +++++NRI++ + +G++R++L +N+ PRG+ LDP+
Sbjct: 332 LNVSIDDPENLAVDWVNDKLYVVETKVNRIDMVNLDGSHRVILITENLGHPRGIALDPTV 391
Query: 204 GTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
G +LF++D P +ER MDG+NR ++ TK+ WP G+TLD+ +RVY+ DS+ D
Sbjct: 392 G--YLFFSDLESLSGGPTVERAFMDGTNRKDLVKTKLGWPAGITLDLVLKRVYWVDSRFD 449
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
+I+ V Y I RK + GG+ +P G
Sbjct: 450 YIE--------TVTYDGIQRKT--VLHGGSRIPHPFG 476
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 136/281 (48%), Gaps = 29/281 (10%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++ CD DC + +DE GC++ EC+ +FG C C + C C G +
Sbjct: 3725 HCISQHLACDDIDDCGDQSDE-TGCNIDECE-QFGTCPQHCQNSKGSYECYCAEG--FRS 3780
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYV--LEYDNHTCKAINH-------- 113
S+T E + + N + +E Y LE H +A+++
Sbjct: 3781 LSITYGKRCEADGNPPLLLLPENVRIRKYNLSSEKYADYLEEQEHI-QAVDYDWDPEDIS 3839
Query: 114 -SAAFLII----SNRHSILVADLE--EKGKDHRAQDIVVSGLDLV---EGLAYDWIGGHI 163
S + + SN +I A + E G ++ Q ++ GL + +GLA DW+G HI
Sbjct: 3840 LSVLYYTVLGHGSNFGAIKRAYIPNFESGSNNHVQ-VMNLGLKYIMQPDGLAVDWVGRHI 3898
Query: 164 YWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIG 223
YW D+R RIEV + +G R L + QP ++++P G ++WTDWG+ P+IE
Sbjct: 3899 YWSDARSQRIEVAELDGRYRKWLISTQLDQPAAVVVNPKLGL--MYWTDWGKEPKIEAAW 3956
Query: 224 MDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKLDFID 263
MDG R+ ++ + WP GL++D + R+Y++D K I+
Sbjct: 3957 MDGQQRNVLVHEDLGWPTGLSIDYLNNDRIYWSDFKEKTIE 3997
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 19/180 (10%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ S + +G+A+DWI IY+ D I E+G+ R V+A+ +T+PR ++LDP
Sbjct: 2246 IIASDIGTTDGIAFDWINRRIYYSDYTNQTINSMAEDGSKRTVIAR--VTEPRAIVLDPC 2303
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+ WG N +IER + G+ R I+++ + WP+GLT+D +Y+AD+ L I
Sbjct: 2304 GG--YIYWSSWGTNAKIERATLGGNFRKPIVNSSLVWPSGLTVDHEEDLLYWADASLRRI 2361
Query: 263 DCKSLE-IKTNVNYSTIFRK---------LYWIDEGGNGVPLKIGKAN-MDGSNASILVS 311
+ +L ++ + ST+FR +YW D KI +AN DGS + + +
Sbjct: 2362 ERSTLMGMEREIVVSTVFRPFGLTVNGQYIYWTDWSTK----KIYRANKYDGSGQTAMTT 2417
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 121/267 (45%), Gaps = 59/267 (22%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G+ L DN TC ++F+++S + HS
Sbjct: 1815 CQQICLPVPGGLFSCACATGFKLNPDNQTCSPY---SSFIVVSMLSAIRGFSLELSDHSE 1871
Query: 127 LVADLEEKGKDHRAQDIVVS-------------------------------------GLD 149
+ + +G++ D+ VS G +
Sbjct: 1872 AMVPVAGQGRNALHVDVDVSSGFIYWCDFSISEKSYNAIRRIKPDGSGFTNIITHGIGEN 1931
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ ++Y++++ + IEV N T R VL + + PR +++DP R+
Sbjct: 1932 GVRGIAVDWVAENLYFINAFQSETLIEVLKINTTYRRVLLRVIVDMPRDIVVDPK--NRY 1989
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
LFW+D+G+NP+IER +D +NR+ ++S + P GL LD VY+ D LD I ++
Sbjct: 1990 LFWSDYGQNPKIERSFLDCTNRTVLVSEGVVTPRGLALDHNNGYVYWVDDTLDVISRINI 2049
Query: 268 EIKT--NVNYSTIFRKLYWIDEGGNGV 292
E K + Y + + Y I GN +
Sbjct: 2050 EGKQLRVIRYGSRYPTPYAITVFGNSM 2076
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 107/464 (23%), Positives = 175/464 (37%), Gaps = 136/464 (29%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGP----GCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+RC+ ++C+ DC +G+DE G C CSN C
Sbjct: 3680 NRCIYSHEMCNHMDDCGDGSDEKEENCVGPTPRPCSEDEFKCSNK----------HCISQ 3729
Query: 59 EILSNDSVTCQD--------MNECEQPGYCSQMCTNTKGSYICSCNEGY---VLEYDNHT 107
+ +D C D ++ECEQ G C Q C N+KGSY C C EG+ + Y
Sbjct: 3730 HLACDDIDDCGDQSDETGCNIDECEQFGTCPQHCQNSKGSYECYCAEGFRSLSITYGKR- 3788
Query: 108 CKAINHSAAFLIISNRH-------SILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIG 160
C+A + L+ N S AD E+ + +A D D+ + Y +
Sbjct: 3789 CEADGNPPLLLLPENVRIRKYNLSSEKYADYLEEQEHIQAVDYDWDPEDISLSVLYYTVL 3848
Query: 161 GHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIE 220
GH G+N + + I F + + ++
Sbjct: 3849 GH-----------------GSNFGAIKRAYIPN---------------FESGSNNHVQVM 3876
Query: 221 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFR 280
+G+ I P+GL +D R +Y++D++
Sbjct: 3877 NLGL----------KYIMQPDGLAVDWVGRHIYWSDAR---------------------- 3904
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
+I A +DG L+S QL + A+ ++ + G++Y
Sbjct: 3905 ------------SQRIEVAELDGRYRKWLISTQLDQPAAVVVNPKLGLMY---------- 3942
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDFCNY 397
WTDWG+ P+IE MDG R+ ++ + WP GL++D + R+Y++D K I+ Y
Sbjct: 3943 -WTDWGKEPKIEAAWMDGQQRNVLVHEDLGWPTGLSIDYLNNDRIYWSDFKEKTIETIKY 4001
Query: 398 DGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTE 441
DGT R+ V V +LD+ G LY+ ++
Sbjct: 4002 DGTDRRIVARA-------------AAVNPYSLDIFEGQLYWVSK 4032
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 125/336 (37%), Gaps = 98/336 (29%)
Query: 75 EQPGYCSQMCTNTKGSYI--CSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE 132
E G CS +C G + CSC G L+ D +C + +LI ++ S+ L+
Sbjct: 2134 ENNGGCSHLCFALPGLHTPKCSCVFG-TLDRDGRSCAIPKEN--YLIFASESSLRSLHLD 2190
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN-- 190
+ DH +S V L YD I IY+ + E G +I N
Sbjct: 2191 PE--DHSTPFQAISVGRHVMTLDYDGINNRIYFTQNL--------EAGHGQISYVSLNAE 2240
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
I+ P TII++ I +G+ D R
Sbjct: 2241 ISSP------------------------------------TIIASDIGTTDGIAFDWINR 2264
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
R+Y++D TN +++ DGS +++
Sbjct: 2265 RIYYSD-------------YTNQTINSMAE---------------------DGSKRTVIA 2290
Query: 311 SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 370
A+ LD C +++W+ WG N +IER + G+ R I+++ + WP
Sbjct: 2291 RVTEPRAIVLD-----------PCGGYIYWSSWGTNAKIERATLGGNFRKPIVNSSLVWP 2339
Query: 371 NGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+GLT+D +Y+AD+ L I+ G R+ V+
Sbjct: 2340 SGLTVDHEEDLLYWADASLRRIERSTLMGMEREIVV 2375
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 48/237 (20%)
Query: 213 WGENP-RIERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP +I R+ DG+NR+ + + + L LD +R +Y+ S I+ L ++
Sbjct: 1580 WVENPGKIHRVKTDGTNRTVFVPLSNLGSSMSLALDWISRNLYYTSSGTQSIE--VLTLR 1637
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
+V Y+ + L D GV +G + LD NG LY+S
Sbjct: 1638 GDVRYA---KTLITNDGTALGVGFPVG--------------------ITLDPANGKLYWS 1674
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 390
TD G +I MDG++ T+ + + LTLDI +++Y+A +
Sbjct: 1675 D-------HGTDSGVPAKIASANMDGTSPKTLFTGNLEHLEFLTLDIEEQKLYWAVTSRG 1727
Query: 391 FIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I+ N DGT R ++ NDL G+ LYYS E E ++
Sbjct: 1728 VIERGNVDGTDRMVLV---------NDLSHPWGIAVYG-----SFLYYSDEQYEVIE 1770
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 86/229 (37%), Gaps = 44/229 (19%)
Query: 74 CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF----------LIISNR 123
CEQ S N Y C C G+ L+ D H C A+ F IS +
Sbjct: 540 CEQICVLSHRTDNDGLGYRCKCTFGFNLDVDGHHCVAVKQFLIFSSEVAVRGIPFTISTQ 599
Query: 124 HSILVADLEEK----GKDHRAQD-------------------------IVVSGLDLVEGL 154
++V G D AQ+ + + ++ VE L
Sbjct: 600 EDVMVPVTGNPSFFVGIDFDAQENTIFFSDTSIDMIYKQKIDGTEREILTANRVESVESL 659
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
+DWI ++YW D + V +R + + N+ PR +++ P G L+W D
Sbjct: 660 TFDWISKNLYWTDISYRSVSVMRLADKSRREIVQ-NLNNPRSIVVHPIAGALRLYWVD-A 717
Query: 215 ENPRIERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLDFI 262
+IE DG +R + ++ P GLT + V+F D +L I
Sbjct: 718 LFDKIEHSTFDGLDRRVLGHIQQMTHPFGLT--VFQDYVFFTDWRLGAI 764
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 25/146 (17%)
Query: 131 LEEKGKDHRAQD--------IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
+E GK HR + + +S L LA DWI ++Y+ S IEV G
Sbjct: 1581 VENPGKIHRVKTDGTNRTVFVPLSNLGSSMSLALDWISRNLYYTSSGTQSIEVLTLRGDV 1640
Query: 183 RIVLAKDNITQ---------PRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNR 229
R AK IT P G+ LDP+ G L+W+D G + +I MDG++
Sbjct: 1641 R--YAKTLITNDGTALGVGFPVGITLDPANGK--LYWSDHGTDSGVPAKIASANMDGTSP 1696
Query: 230 STIISTKIYWPNGLTLDIATRRVYFA 255
T+ + + LTLDI +++Y+A
Sbjct: 1697 KTLFTGNLEHLEFLTLDIEEQKLYWA 1722
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
IV S L GL D +YW D+ L RIE G R ++ + +P G+ ++
Sbjct: 2331 IVNSSLVWPSGLTVDHEEDLLYWADASLRRIERSTLMGMEREIVVS-TVFRPFGLTVN-- 2387
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
++++WTDW DGS ++ + ++ +W G+ +
Sbjct: 2388 --GQYIYWTDWSTKKIYRANKYDGSGQTAMTTSFPFWLMGIRV 2428
>gi|432934618|ref|XP_004081957.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Oryzias latipes]
Length = 4704
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/304 (43%), Positives = 171/304 (56%), Gaps = 45/304 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-----DLAECKHKFGLCSNTCHPTPLGALCTCPPGE 59
C+N+T VCD +CPNGADE P C D C C++ C P GA CTCP G
Sbjct: 1341 CINITTVCDNTPNCPNGADESPLCNEHLPDQESCSDNNAGCTHGCIQGPFGAQCTCPVGY 1400
Query: 60 ILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI 119
LSNDS TC D++EC PG CSQ C N +GS+ C C EGY LE D TCK + AFL+
Sbjct: 1401 QLSNDSKTCVDIDECNPPGLCSQHCFNERGSFRCHCQEGYTLEADQRTCKTSDSRQAFLL 1460
Query: 120 ISNRHSILVADLEEKG-------KDHR-------------------AQD----------- 142
+++R+ I+ D+ + +D R +QD
Sbjct: 1461 VASRNQIMQDDITTQPNVIRSVIRDGRNIVALDFDSVTDRVFWSDTSQDRIWSSYMNGSD 1520
Query: 143 ---IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
I SG+ + E LA DW+G ++YW D L IEV +GT+R VL +NIT PRG++L
Sbjct: 1521 RAVIFDSGVTVTESLAVDWVGRNLYWTDYVLETIEVSKLDGTHRAVLLSENITNPRGLVL 1580
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP +FWTDWG NPRIE+ MDG R+ I+S+K+YWPNGLT+D +YFAD+ L
Sbjct: 1581 DPRESAHLMFWTDWGRNPRIEKASMDGKLRTIIVSSKLYWPNGLTIDYPNNLLYFADAYL 1640
Query: 260 DFID 263
DFID
Sbjct: 1641 DFID 1644
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 196/409 (47%), Gaps = 95/409 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L++VCD DC + +DE GC + EC C + C T +CTC PG L
Sbjct: 3132 HCIDLSRVCDRSDDCSDNSDEK-GCGINECTDPSIHRCDHNCTDTLTSFICTCLPGYHLM 3190
Query: 63 NDSVTCQDMNECEQ-PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC + P CSQ+C NT GSY+C C GY+ E D HTC+ ++ + +LI S
Sbjct: 3191 SDRKTCDDIDECSKTPSVCSQICENTAGSYVCKCAPGYLREPDGHTCRQNSNISPYLIFS 3250
Query: 122 NRH--------------------SILVAD-----------------LEEKGKDHRAQDIV 144
NR+ S++ D +E + +++V
Sbjct: 3251 NRYYLRNLSTDGEAYSLILQGLTSVVALDFDRVDRRLYWIDVSRRVIERMSFNGSNREVV 3310
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPRG 196
V+G+ EGLA DW+ +YW+DS L+ ++V + +G LA+ + PRG
Sbjct: 3311 VNGVLHGEGLAVDWVARKLYWVDSFLDCLKVSELDGRFVRKLAEHCVDANNTYCFENPRG 3370
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
++L P G ++FWTDWG+ I R+GMDG+N++ +I++K+ WPNG+T+D ++Y++D
Sbjct: 3371 IVLHPKYG--YVFWTDWGDKAFIGRVGMDGTNKTAVITSKLEWPNGITIDYTNDKLYWSD 3428
Query: 257 SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE 316
+ L++I+ +N+DG + + G L
Sbjct: 3429 AHLNYIE----------------------------------YSNLDGHHRHTVYDGNLPH 3454
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
AL + +Y WTDW + DGS+R +++T
Sbjct: 3455 PFALTVFEDTVY-----------WTDWNTRTVEKGNKYDGSSREVLVNT 3492
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 63/339 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+C+ + K+CDG+ DC +G DE C + C C + CH +P G C+CP G
Sbjct: 293 KCIPMDKLCDGRVDCLDGEDETNTTASRNCSIWRCASL--SCEHRCHASPDGGTCSCPSG 350
Query: 59 EILS-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
++S NDS +C D ++C G C Q+C + GS+ CSC +GYVLE + I
Sbjct: 351 YVVSGNDSRSCVDFDDCSMWGECDQVCEDRIGSHRCSCLQGYVLEQHRYCRADIQTGVPS 410
Query: 118 LIISNRHSILVADLEEKGKD---------------------------------------- 137
LI SN +++ D+ +
Sbjct: 411 LIFSNGKDLIMGDIHGNSQHALISSQNRGIAVGVDFHYNLRLIFWTDTIQNKVFSAHMDG 470
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
Q ++ +D E LA DW+ +Y +++ +NRI++ D +G+NR+ L +N+ PRG+
Sbjct: 471 SNMQVVLDVSVDYPENLAVDWVNNKLYVVEASVNRIDMVDFDGSNRVTLITENLGNPRGL 530
Query: 198 MLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
+DP+ G ++F++DW P +ER MDG+NR +I +K+ WP G+TLD+ +RVY+
Sbjct: 531 AVDPTVG--YMFFSDWEAKNGQPGLERAFMDGTNRYGVIGSKLGWPAGITLDLEAKRVYW 588
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
DS+ D+I+ Y + RK + GG +P
Sbjct: 589 VDSRYDYIE--------TATYDGLHRKT--VVHGGAVIP 617
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 161/389 (41%), Gaps = 98/389 (25%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHP-TPLGALCTCPPG-EI 60
+C+ L CD DC + +DE GC A LC + C T G LC+C G +
Sbjct: 3984 QCIPLQYACDEYDDCGDESDE-LGCHQASGHTCSANLCEHNCTDLTDGGFLCSCRSGYKP 4042
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH--TCKAINHSAAFL 118
+ C+D+NECE G C Q C NTKGSY C C+EG++ + H C A + L
Sbjct: 4043 KDTERHNCEDVNECEVYGMCPQDCKNTKGSYECFCSEGFISFGEPHGTECAAQGNPPVLL 4102
Query: 119 II-----------SNRHSILVADLEEKGKDHRAQDIVVSGLDLV---------------- 151
+ S ++S V + E D GL +V
Sbjct: 4103 LPDNVRIRRFNLSSEQYSDYVDNAEHIQALDYLWDPEGEGLSIVYWTVLGRGSQFGSIKR 4162
Query: 152 ---------------------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
EG+A DW+GGHIYW DS NRIEV +G R
Sbjct: 4163 AYMTTFNDYGNNPVKEADLNLRYIASPEGIAVDWVGGHIYWTDSGTNRIEVAKLDGRYRK 4222
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK-IYWPNGL 243
L + QP ++++P+ G ++WTDWG+ PRIE MDG R ++S + + WP GL
Sbjct: 4223 WLIYTELDQPAAIVVNPTLGM--MYWTDWGKQPRIESAWMDGQQRMVLVSDQGLGWPTGL 4280
Query: 244 TLDIAT-RRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMD 302
+D R+Y+ DSK + I+ D
Sbjct: 4281 AVDFVNGNRIYWCDSKENIIE----------------------------------SMKHD 4306
Query: 303 GSNASILVSGQLYEALALDLENGMLYYST 331
G++ + SG + +LD+ G +Y++T
Sbjct: 4307 GTDRKTVTSGDIGHPYSLDVFEGHVYWTT 4335
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 51/244 (20%)
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ S L +G+AYDWI IY+ D I +G R V+A ++++PR +MLDP
Sbjct: 2486 IASDLGAPDGIAYDWINKRIYYSDFVNQSISSMSVDGAQRTVIA--HVSRPRAIMLDPCR 2543
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +++WTDWG + +IER + G+ R+ I+++ + WPNGLTLD R+Y+AD+ L
Sbjct: 2544 G--YMYWTDWGTHAKIERATLGGNFRTEIVNSSLVWPNGLTLDYEDERLYWADASLQ--- 2598
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
KI ++++ GSN ++VS +Y
Sbjct: 2599 -------------------------------KIERSSLTGSNREVIVSTAIYP------- 2620
Query: 324 NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 383
++ ++++WTDW DGS+ +I P + + +A+R+
Sbjct: 2621 -----FAMTMFGQFIYWTDWNTRSIYRANKHDGSDMRVMIQNLPSRPMDIHV-LASRKQQ 2674
Query: 384 FADS 387
DS
Sbjct: 2675 QCDS 2678
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 115/252 (45%), Gaps = 37/252 (14%)
Query: 33 CKHKFGLCSNTCHPTPLGAL-CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
C + G C C P P C C G L+ D+ TC Y S + +T +
Sbjct: 2043 CTNNLGACQQLCLPRPQSLFTCACATGFKLNADNRTCAP--------YQSYVVISTLSAI 2094
Query: 92 ICSCNEGYVLEYDNHTCKAIN-------------HSAAFLIISNRHSILVA------DLE 132
+G+ LE +H+ + H A+ I S VA ++
Sbjct: 2095 -----KGFSLEGSDHSEAMVPVAGRGRNALHIDVHMASSFIYWCDFSSTVAIQNGVRRIK 2149
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDN 190
G R+ G + + G+A DW ++Y+ ++ L +EV N T R VL K
Sbjct: 2150 PDGSGLRSMVTSGIGRNGIRGIAVDWAADNLYFTNAFLTETYVEVLRINTTYRRVLLKTQ 2209
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ PR +++DP R+LFW D+G+NP+IER +DG+NR+ ++S+ I P GL LD T
Sbjct: 2210 VDMPRHLVVDPR--NRFLFWADYGQNPKIERALLDGTNRTVLVSSGIITPRGLALDWKTG 2267
Query: 251 RVYFADSKLDFI 262
VY+ D LD I
Sbjct: 2268 YVYWVDDSLDMI 2279
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 110/251 (43%), Gaps = 48/251 (19%)
Query: 70 DMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI--L 127
D CEQ S N Y C C GY L D C ++ FL+ S++ ++ +
Sbjct: 681 DRGGCEQICILSHRSDNGGLGYRCKCRIGYDLHADGKRCLSVRQ---FLLFSSQLAVRGI 737
Query: 128 VADLEEK---------------GKDHRAQDIVV-------------------------SG 147
+L + G D A+D V+ +
Sbjct: 738 PFNLSSQEDIILPVTGPPSYFVGVDFSAEDDVIFFSDTAKDIIYKQKVDGTGREVLAANR 797
Query: 148 LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
++ VE LAYDWI ++YW D R I V +R + + N+ PR +++ P G +
Sbjct: 798 VEGVEDLAYDWISKNLYWTDPRYRSISVMRLADKSRRAIIR-NLNNPRAIVVHPIMG--Y 854
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
+FWTDW +I R DGS+ +I++T + WPNGL +D + R+Y+ D+ D I+ +
Sbjct: 855 IFWTDWYRPAKIMRAWGDGSHAVSIVNTTLGWPNGLAIDWSAMRLYWVDAFFDKIEHSNF 914
Query: 268 EIKTNVNYSTI 278
+ + ++ I
Sbjct: 915 DGRNRLSLERI 925
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 134/336 (39%), Gaps = 98/336 (29%)
Query: 78 GYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G C Q+C S + C+C G+ L DN TC ++++IS +I LE G
Sbjct: 2048 GACQQLCLPRPQSLFTCACATGFKLNADNRTCAPYQ---SYVVISTLSAIKGFSLE--GS 2102
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
DH + V+G G N
Sbjct: 2103 DHSEAMVPVAG-------------------------------RGRN-------------A 2118
Query: 197 MMLDPSPGTRWLFWTDWGENPRIE----RIGMDGSNRSTIISTKI--YWPNGLTLDIATR 250
+ +D + +++W D+ I+ RI DGS +++++ I G+ +D A
Sbjct: 2119 LHIDVHMASSFIYWCDFSSTVAIQNGVRRIKPDGSGLRSMVTSGIGRNGIRGIAVDWAAD 2178
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
+YF ++ L + L I +T +R++ + K +D
Sbjct: 2179 NLYFTNAFLTETYVEVLRI------NTTYRRV-------------LLKTQVD-------- 2211
Query: 311 SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 370
+ L +D N R+LFW D+G+NP+IER +DG+NR+ ++S+ I P
Sbjct: 2212 ---MPRHLVVDPRN-----------RFLFWADYGQNPKIERALLDGTNRTVLVSSGIITP 2257
Query: 371 NGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
GL LD T VY+ D LD I + G G Q++
Sbjct: 2258 RGLALDWKTGYVYWVDDSLDMIARISPQG-GETQIV 2292
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 77/148 (52%), Gaps = 16/148 (10%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+ Y I +++Y+ D V I ++DG+ +++ A+ LD
Sbjct: 2496 IAYDWINKRIYYSD----FVNQSISSMSVDGAQRTVIAHVSRPRAIMLD----------- 2540
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
C +++WTDWG + +IER + G+ R+ I+++ + WPNGLTLD R+Y+AD+ L I
Sbjct: 2541 PCRGYMYWTDWGTHAKIERATLGGNFRTEIVNSSLVWPNGLTLDYEDERLYWADASLQKI 2600
Query: 393 DFCNYDGTGRQQVILIDLMVEFTNDLMG 420
+ + G+ R +VI+ + F + G
Sbjct: 2601 ERSSLTGSNR-EVIVSTAIYPFAMTMFG 2627
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 135/347 (38%), Gaps = 94/347 (27%)
Query: 91 YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDL 150
Y C+C+ G++L D TC + FL++ IL L + K++ I V+GL
Sbjct: 1744 YSCACHSGWILAADQFTCTRVED--PFLVVVRDSIILGIPLNPEEKNNDVM-IPVAGLQN 1800
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
+ +D IYW++ PG
Sbjct: 1801 GYDVDFDDSEQIIYWVEH----------------------------------PG------ 1820
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYW-PNGLTLDIATRRVYFADSKLDFIDCKSLEI 269
I R+ DG+NR I P GL LD T +Y+ + I+ L++
Sbjct: 1821 -------EIHRVKSDGTNREEFAPAAILGSPVGLALDWITENLYYTNPGAQSIE--VLKL 1871
Query: 270 KTNVNYSTIF----------------------RKLYWIDEGG-NGVPLKIGKANMDGSNA 306
+ + Y KLYW D+G +G+P K+ A+MDG N
Sbjct: 1872 RGELQYRKTLITNDGSPTGAGSPVGITVDPARGKLYWTDQGTESGIPAKVASADMDGQNP 1931
Query: 307 SILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+IL + L E L +D++ LY++ +IER DGSNR TI+S
Sbjct: 1932 AILFTDNLDHIEFLTVDIQENKLYWAVTS------------TGKIERGDPDGSNRITIVS 1979
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
+ P G+T + +YF D + I+ + TG +V+L + M
Sbjct: 1980 -GLSHPWGVT--VYQNFLYFTDRDFEVIERVD-KSTGANKVVLRNNM 2022
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
++FWTDW +I R DGS+ +I++T + WPNGL +D + R+Y+ D+ D I+ N
Sbjct: 854 YIFWTDWYRPAKIMRAWGDGSHAVSIVNTTLGWPNGLAIDWSAMRLYWVDAFFDKIEHSN 913
Query: 397 YDGTGR 402
+DG R
Sbjct: 914 FDGRNR 919
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 135/343 (39%), Gaps = 57/343 (16%)
Query: 131 LEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLAK 188
+E+ D + + I+VS L GL D+ +Y+ D+ L+ I+ CD NG NR VLA
Sbjct: 1600 IEKASMDGKLRTIIVSSKLYWPNGLTIDYPNNLLYFADAYLDFIDYCDYNGNNRKQVLAS 1659
Query: 189 DNITQ-PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
D + Q P + + +++WTD N R+ R T++ + P GL
Sbjct: 1660 DLVLQHPHAITI----FEDFVYWTDRYIN-RVMRAHKWHGENQTVMLFNLPQPMGLVAVH 1714
Query: 248 ATRRVYFADSKLDFIDCKSLEIKTNV--NYSTIFRKLYWIDEGGN--------------- 290
TR+ + L+ C + + + V Y + WI
Sbjct: 1715 PTRQPAGENHCLN-SPCTHICLLSAVGPRYYSCACHSGWILAADQFTCTRVEDPFLVVVR 1773
Query: 291 -----GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
G+PL + N D I V+G L+NG Y + + + W E
Sbjct: 1774 DSIILGIPLNPEEKNND---VMIPVAG---------LQNG--YDVDFDDSEQIIY--WVE 1817
Query: 346 NP-RIERIGMDGSNRSTIISTKIYW-PNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403
+P I R+ DG+NR I P GL LD T +Y+ + I+ G +
Sbjct: 1818 HPGEIHRVKSDGTNREEFAPAAILGSPVGLALDWITENLYYTNPGAQSIEVLKLRGELQY 1877
Query: 404 QVILIDLMVEFTND--LMGDNGVPALALDLENGMLYYSTEGAE 444
+ LI TND G + +D G LY++ +G E
Sbjct: 1878 RKTLI------TNDGSPTGAGSPVGITVDPARGKLYWTDQGTE 1914
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+IV S L GL D+ +YW D+ L +IE G+NR V+ I P M +
Sbjct: 2569 EIVNSSLVWPNGLTLDYEDERLYWADASLQKIERSSLTGSNREVIVSTAI-YPFAMTM-- 2625
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++++WTDW DGS+ +I P + + +A+R+ DS
Sbjct: 2626 --FGQFIYWTDWNTRSIYRANKHDGSDMRVMIQNLPSRPMDIHV-LASRKQQQCDS 2678
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 135 GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK-DNITQ 193
G A IV + L GLA DW +YW+D+ ++IE + +G NR+ L + I+
Sbjct: 871 GDGSHAVSIVNTTLGWPNGLAIDWSAMRLYWVDAFFDKIEHSNFDGRNRLSLERIAQISH 930
Query: 194 PRGMMLDPSPGTRWLFWTDW 213
P G+ + + ++TDW
Sbjct: 931 PFGLTIFEG----YAYFTDW 946
>gi|355750598|gb|EHH54925.1| hypothetical protein EGM_04032 [Macaca fascicularis]
Length = 4509
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 166/537 (30%), Positives = 245/537 (45%), Gaps = 108/537 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCDG DCPNG DE P C+ C G C++ C P GA C CP G +L+ND
Sbjct: 1376 CVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHECVQEPFGAKCLCPLGFLLAND 1435
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++EC+ PG CSQ C N +GS+ C+C+ GY+LE D TCK L++++++
Sbjct: 1436 SKTCEDIDECDIPGSCSQHCYNMRGSFRCACDTGYMLESDGRTCKVTASENLLLLVASQN 1495
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+ + + G D R
Sbjct: 1496 KIIADSVTSQVHNIYSLVENGSYIVAVDFDSISGRIFWSDATQGKTWSAFQNGTDRRV-- 1553
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ S + L E +A DW+G ++YW D L IEV +G++R VL N+T PRG+ LDP
Sbjct: 1554 VFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKNLTNPRGLALDPR 1613
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
LFW+DWG +PRIER MDGS R+ I+ KI+WP GLT+D R +YF DS LD+I
Sbjct: 1614 MNEHLLFWSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYI 1673
Query: 263 D-------------CKSLEIKTNVNYSTIFRKLYWID------------EGGNGV----- 292
D L I+ + +YW D GGN
Sbjct: 1674 DFCDYNGHHRKQVIASDLIIRHPYALTLFEDSVYWTDRATRRVMRANKWHGGNQSVVMYN 1733
Query: 293 ---PLKI---GKANMDGSNASILVSGQLYEALALDL------ENGMLYYSTLK------- 333
PL I + + L++ + + + L + M+ + ++
Sbjct: 1734 IQWPLGIVAVHPSKQPNYDQPFLITVRQHIIFGISLNPDVKSNDAMVPIAGIQNGLDVEF 1793
Query: 334 --CTRWLFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPN-GLTLDIATRRVYFADSKL 389
++++W ENP I R+ DG+NR+ S + P+ L LD +R +Y + +
Sbjct: 1794 DDAEQYIYWV---ENPGEIHRVKTDGTNRTVFASVSMVGPSMNLALDWVSRNLYSTNPRT 1850
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTND--LMGDNGVPALALDLENGMLYYSTEGAE 444
I+ G R + LI ND +G + +D G LY+S +G +
Sbjct: 1851 QSIEVLTLHGDIRYRKTLI------ANDGTALGVGFPIGITVDPTRGKLYWSDQGTD 1901
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/352 (32%), Positives = 176/352 (50%), Gaps = 69/352 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
RC+++ KVCDG DCP DE G C C C CH TP G C CPPG
Sbjct: 395 RCISIYKVCDGILDCPGREDENSTTTGKYCSTTLCSALN--CQYQCHETPYGGACFCPPG 452
Query: 59 -EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH-SAA 116
I NDS TC + ++C+ G C Q C + G ++C C EGY+LE H CKA + A
Sbjct: 453 YTINHNDSRTCVEFDDCQIWGICDQKCESRPGHHLCHCEEGYILERGQH-CKANDSFGEA 511
Query: 117 FLIISNRHSILVADLEEKGKDHR------------------------------------- 139
+I SN +L+ D+ G+ R
Sbjct: 512 SIIFSNGRDLLIGDIH--GRSFRILVESQNRGVAVGVAFHYHLQRVFWTDTVQNKVFSVD 569
Query: 140 -----AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
Q+++ ++ E LA DW+ IY +++++NRI++ + +G+ R+ L +N+ P
Sbjct: 570 IHGLNIQEVLNVSVETPENLAVDWVNNKIYLVETKVNRIDMVNLDGSYRVTLITENLGHP 629
Query: 195 RGMMLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
RG+ +DP+ G +LF++DW P++ER MDGSNR ++ TK+ WP G+TLD+ ++R
Sbjct: 630 RGIAVDPTVG--YLFFSDWESLSGEPKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKR 687
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
VY+ DS+ D+I+ V Y I RK + GG+ +P G + +G
Sbjct: 688 VYWVDSRFDYIE--------TVTYDGIQRKT--VVHGGSLIPHPFGISLFEG 729
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 167/364 (45%), Gaps = 55/364 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ + K+C+ DC + +DE GC + EC C + C T C+C PG L
Sbjct: 3094 RCIEMMKLCNHLDDCLDNSDEK-GCGVNECHDPSISGCDHNCTDTLTSFYCSCRPGYKLM 3152
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P CSQ C N GSYIC C GY+ E D TC+ ++ +LI S
Sbjct: 3153 SDKRTCVDIDECTETPFVCSQKCENVIGSYICKCAPGYLREPDGKTCRQNSNIEPYLIFS 3212
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
NR+ L D +++ GL V L +D + +YW+D++ IE N T
Sbjct: 3213 NRYY-----LRNLTIDGYFYSLILEGLGNVVALDFDRVEKRLYWIDTQRQVIERMFLNKT 3267
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
N+ + + P L +R+++W DWG I R+GMDG+N+S IISTK+ WPN
Sbjct: 3268 NKETIINHRL--PAAESLAVEWVSRYIYWADWGHRAYIGRVGMDGTNKSVIISTKLEWPN 3325
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
G+T+D +Y+AD+ L +I+ LE
Sbjct: 3326 GITIDYTNDLLYWADAHLGYIEYSDLE--------------------------------- 3352
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
G + G L A+ + +Y WTDW + DGSNR T
Sbjct: 3353 -GHRRHTVYDGSLPHPFAITIFEDTIY-----------WTDWNTRTVEKGNKYDGSNRQT 3400
Query: 362 IIST 365
+++T
Sbjct: 3401 LVNT 3404
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 144/336 (42%), Gaps = 93/336 (27%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT-------- 54
+RC+ +VC+G DC +G DE C+ PTP CT
Sbjct: 3851 NRCIYGHEVCNGVDDCGDGTDETE----EHCRK----------PTP--KPCTEYEYKCGN 3894
Query: 55 --CPPGEILSNDSVTCQD--------MNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYD 104
C P + + +D+ C D +NECEQ G C Q C NTKGSY C C +G+ D
Sbjct: 3895 GHCIPNDNVCDDADDCGDWSDELGCNINECEQFGTCPQHCRNTKGSYECVCADGFTSMSD 3954
Query: 105 N--HTCKAINHSAAFLIISN-----------RHSILVADLE------------------- 132
+ C A S L+ N R S + D E
Sbjct: 3955 HPGKRCAAEGSSPLLLLPDNVRIRKYNLSSERFSEYLQDEEYIQAVDYDWDPEDIGLSVV 4014
Query: 133 ----------------------EKGKDHRAQ--DIVVSGLDLVEGLAYDWIGGHIYWLDS 168
E G ++ Q D+ + + +G+A DW+G HIYW D
Sbjct: 4015 YYTVRGEGSRFGAIKRAYIPNFESGHNNLVQEVDLKLKYVMQPDGIAVDWVGRHIYWSDV 4074
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ RIEV +G R L ++ QP + ++P G +FWTDWG+ P+IE M+G +
Sbjct: 4075 KNKRIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLGL--MFWTDWGKEPKIESAWMNGED 4132
Query: 229 RSTIISTKIYWPNGLTLD-IATRRVYFADSKLDFID 263
R+ ++ + WP GL++D + R+Y++D K D I+
Sbjct: 4133 RNILVFEDLGWPTGLSIDYLNNDRIYWSDFKEDVIE 4168
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 114/253 (45%), Gaps = 61/253 (24%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G+ L DN +C N +F+++S + HS
Sbjct: 2037 CQQICLPVPGGLFSCACATGFKLNPDNRSCSPYN---SFIVVSMLSAIRGFSLELSDHSE 2093
Query: 127 LVADLEEKGKDHRAQDIVVS-------------------------------------GLD 149
+ + +G++ D+ VS G +
Sbjct: 2094 TMVPVAGQGRNALHVDVDVSSGFVYWCDFSSSVTSDNAIRRIKPDGSSLMNIVTHGIGEN 2153
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ G++Y+ ++ ++ IEV N T R VL K + PR +++DP R+
Sbjct: 2154 GVRGIAVDWVAGNLYFTNAFVSETLIEVLRINTTYRRVLLKVTVDMPRHIVVDPK--NRY 2211
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
LFW D+G+ P+IER +D +NR+ ++S I P GL +D + VY+ D LD I
Sbjct: 2212 LFWADYGQRPKIERSFLDCTNRTVLVSEGIVTPRGLAVDRSDGYVYWVDDSLDII----A 2267
Query: 268 EIKTNVNYSTIFR 280
I+ N S + R
Sbjct: 2268 RIRINGENSEVIR 2280
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 75/125 (60%), Gaps = 4/125 (3%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ SG+ +G+A+DWI IY+ D I E+G+NR V+A+ + +PR ++LDP
Sbjct: 2468 VIASGIGTADGIAFDWITRRIYYSDYLNQTINSMAEDGSNRTVIAR--VPKPRAIVLDPC 2525
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W DW + +IER + G+ R I+++ + P+GLTLD +Y+ D+ L I
Sbjct: 2526 QG--YLYWADWDMHAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQKI 2583
Query: 263 DCKSL 267
+ +L
Sbjct: 2584 ERSTL 2588
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 77/133 (57%), Gaps = 13/133 (9%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+++ + ++LYWID I + ++ +N +++ +L A +L +E
Sbjct: 3240 LDFDRVEKRLYWIDTQRQ----VIERMFLNKTNKETIINHRLPAAESLAVE--------- 3286
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
+R+++W DWG I R+GMDG+N+S IISTK+ WPNG+T+D +Y+AD+ L +I
Sbjct: 3287 WVSRYIYWADWGHRAYIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWADAHLGYI 3346
Query: 393 DFCNYDGTGRQQV 405
++ + +G R V
Sbjct: 3347 EYSDLEGHRRHTV 3359
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 71/131 (54%), Gaps = 18/131 (13%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ R +YW D +I A +DG L+S L + A+A++ + G++
Sbjct: 4065 VGRHIYWSDVKNK----RIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLGLM-------- 4112
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDF 394
FWTDWG+ P+IE M+G +R+ ++ + WP GL++D + R+Y++D K D I+
Sbjct: 4113 ---FWTDWGKEPKIESAWMNGEDRNILVFEDLGWPTGLSIDYLNNDRIYWSDFKEDVIET 4169
Query: 395 CNYDGTGRQQV 405
YDGT R+ +
Sbjct: 4170 IKYDGTDRRVI 4180
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 122/333 (36%), Gaps = 92/333 (27%)
Query: 75 EQPGYCSQMCTNTKGSYICSCNEGY-VLEYDNHTCKAINHSAAFLIISNRHSILVADLEE 133
E G CS +C G Y C+ + LE D C AI+ + FLI + +S+ L+
Sbjct: 2356 ENNGGCSHLCFALPGLYTPKCDCAFGTLESDGKNC-AIS-TENFLIFALSNSLRSLHLDP 2413
Query: 134 KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
+ Q I V V L YD + IY+ + + + G V I
Sbjct: 2414 ENHSPPFQTINVE--RTVMSLDYDSVSDRIYFTQNLASGV------GQISYVSLSSGIHT 2465
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
P T+I++ I +G+ D TRR+Y
Sbjct: 2466 P------------------------------------TVIASGIGTADGIAFDWITRRIY 2489
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
++D ++++ I DGSN +++
Sbjct: 2490 YSD---------------------------YLNQ-------TINSMAEDGSNRTVIARVP 2515
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
A+ LD C +L+W DW + +IER + G+ R I+++ + P+GL
Sbjct: 2516 KPRAIVLD-----------PCQGYLYWADWDMHAKIERATLGGNFRVPIVNSSLVMPSGL 2564
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
TLD +Y+ D+ L I+ G R+ ++
Sbjct: 2565 TLDYEEDLLYWVDASLQKIERSTLTGMDREVIV 2597
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 50/238 (21%)
Query: 213 WGENP-RIERIGMDGSNRSTIISTKIYWPN-GLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DG+NR+ S + P+ L LD +R +Y + + +S+E+
Sbjct: 1802 WVENPGEIHRVKTDGTNRTVFASVSMVGPSMNLALDWVSRNLYSTNPRT-----QSIEVL 1856
Query: 271 TNVNYSTIFRKLYWIDEGGN-GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
T ++ +RK ++G GV IG + +D G LY+
Sbjct: 1857 T-LHGDIRYRKTLIANDGTALGVGFPIG--------------------ITVDPTRGKLYW 1895
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
S TD G +I MDG++ T+ + + +TLDI +++Y+A +
Sbjct: 1896 SDQG-------TDSGVPAKIASANMDGTSVKTLFTGNLEHLECVTLDIEEQKLYWAVTGR 1948
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I+ N DGT R +IL+ + + + + LYY+ E E ++
Sbjct: 1949 GVIERGNVDGTDR--MILVHQLSH------------PWGIAVYDSFLYYTDEQYEVIE 1992
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 56/219 (25%)
Query: 131 LEEKGKDHRAQD-----IVVSGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
+E G+ HR + V + + +V LA DW+ ++Y + R IEV +G
Sbjct: 1803 VENPGEIHRVKTDGTNRTVFASVSMVGPSMNLALDWVSRNLYSTNPRTQSIEVLTLHGDI 1862
Query: 183 R---IVLAKDN----ITQPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRST 231
R ++A D + P G+ +DP+ G L+W+D G + +I MDG++ T
Sbjct: 1863 RYRKTLIANDGTALGVGFPIGITVDPTRGK--LYWSDQGTDSGVPAKIASANMDGTSVKT 1920
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+ + + +TLDI +++Y+A + G G
Sbjct: 1921 LFTGNLEHLECVTLDIEEQKLYWAVT-------------------------------GRG 1949
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
V I + N+DG++ ILV QL + + + LYY+
Sbjct: 1950 V---IERGNVDGTDRMILVH-QLSHPWGIAVYDSFLYYT 1984
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDP 201
+ + ++ VE LA+DWI ++YW DS I V + T R V+ + PR +++ P
Sbjct: 911 LAANRVENVESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTVVQY--LNNPRSVVVHP 968
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD 260
G L+W D +IE DG +R + ++ P GL I ++F D +L
Sbjct: 969 FAGASRLYWVD-AYFDKIEHSTFDGLDRRRLGHIEQMTHPFGLA--IFGEHLFFTDWRLG 1025
Query: 261 FI 262
I
Sbjct: 1026 AI 1027
>gi|334329949|ref|XP_001375493.2| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 2 [Monodelphis domestica]
Length = 4607
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 124/299 (41%), Positives = 170/299 (56%), Gaps = 40/299 (13%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCD DCPNGADE P C+ C C++ C P GA C CP G L+ND
Sbjct: 1265 CVNLSAVCDDIPDCPNGADESPVCNQESCTDNNAGCTHECIQGPFGAQCLCPFGYQLTND 1324
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D+NECE PG+CSQ C N +GS C C+EGY+LE + TCK L++++R+
Sbjct: 1325 SKTCEDINECETPGFCSQHCFNERGSSRCWCDEGYILEGNGKTCKVAASGNLLLLVTSRN 1384
Query: 125 SILVADLEEKGKD-----HRAQDIVV---------------------------------- 145
I+V ++ +G++ + IV
Sbjct: 1385 QIVVDNITSQGQNIYSLIRDGEHIVAIDFDSLSGRIFWSDIRQDKIWSAFQNGTDRKVVF 1444
Query: 146 -SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
SG+ + E +A DW+G ++YW D L IEV +G +R VL +N+T PRG++LDP
Sbjct: 1445 DSGVTVTESIAVDWVGRNLYWTDYVLETIEVSKMDGNHRTVLISENVTNPRGLVLDPRID 1504
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+FW+DWG+NPRIER MDG+NR+ II KIYWPNGL +D + +YF D+ LD+ID
Sbjct: 1505 AHLMFWSDWGKNPRIERASMDGTNRTVIIRDKIYWPNGLAIDYPNKLLYFMDAYLDYID 1563
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 147/478 (30%), Positives = 221/478 (46%), Gaps = 106/478 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
C+ + K+CDG +DCP G DE G C++++C C + CH +P G +C CP G
Sbjct: 260 HCIPIEKLCDGTSDCPFGGDETNVTAGRHCNISQCATL--SCQHRCHSSPTGGICYCPQG 317
Query: 59 EIL-SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I+ SNDS TC D ++C+ G C Q+C + G + C C EGYVLE H I+ A
Sbjct: 318 YIINSNDSRTCVDFDDCKMWGVCDQLCEDRIGHHQCHCVEGYVLEQHRHCRANISSGVAS 377
Query: 118 LIISNRHSILVADLE---------------EKGKD-----HR------AQDIVVS----- 146
LI SN +L+ D+ G D HR QD V S
Sbjct: 378 LIFSNGRDLLIGDIHGMSFRTLVQSQNRGVAVGVDFHFYLHRIFWTDTVQDKVFSVDIDG 437
Query: 147 ---------GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+D E LA DW+ +Y +++ +NRI++ + +GTNR+ L +N+ PRG+
Sbjct: 438 ANIQEVLNVSVDAPENLAVDWVNNKLYVVETSVNRIDMVNLDGTNRVTLITENLGNPRGI 497
Query: 198 MLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
LDP+ G +LF++DW +P++ER MDG+NR +I TK+ WP G+TLDI ++RVY+
Sbjct: 498 ALDPTIG--YLFFSDWDSLSGDPKVERAFMDGTNRQDLIKTKLGWPAGITLDIVSKRVYW 555
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
D + D+I+ V Y + RK I GG+ +P G + L
Sbjct: 556 VDCRFDYIE--------TVTYDGLQRKT--IAHGGSIIPHPYGIS--------------L 591
Query: 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
+E +F+TDW ++ SN I + + P G+T
Sbjct: 592 FE-------------------HNVFFTDWTRLAVMKANKFSESNPQIIYQSSLR-PYGVT 631
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLE 432
+ A R+ Y + C + G QV ++ + ND +G L DL
Sbjct: 632 IYHALRQPYVRNP-------CGNNNGGCDQVCVLSHRTD--NDGLGYRCKCILGFDLH 680
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 161/312 (51%), Gaps = 51/312 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ + ++C+ DC + +DE GC + EC C + C T CTC PG L +
Sbjct: 3026 CIEMMQICNHLDDCGDNSDEK-GCGINECNDPSISGCDHNCTDTRTSFYCTCLPGYKLMS 3084
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC E P CSQMC NT GSYIC C GY+ E D C+ ++ + +LI SN
Sbjct: 3085 DKKTCDDVDECNETPSVCSQMCENTAGSYICKCARGYIREPDGKRCRQNSNISPYLIFSN 3144
Query: 123 RH-------------------SILVA-------------DLEEKGKDH------RAQDIV 144
R+ + VA DLE + + + I+
Sbjct: 3145 RYYLRNLTADGQSYSLILQGLGMAVALDFDRVEKRLYWIDLERQVIERMFLNGTNKETII 3204
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ--------PRG 196
S L EGLA DW+ +YWLD+ LN + V + +G R LA+ + PRG
Sbjct: 3205 NSNLPAGEGLAVDWVARKLYWLDAYLNCLSVANLDGRFRRRLAEHCMDSNNTFCFQYPRG 3264
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
++L P G ++WTDW + P I R+GMDG+N++ IISTK+ WPNG+T+D ++Y++D
Sbjct: 3265 IVLHPKYGQ--VYWTDWADQPYIGRVGMDGTNKTVIISTKLAWPNGITIDYTNDKLYWSD 3322
Query: 257 SKLDFIDCKSLE 268
+ L +I+ LE
Sbjct: 3323 AHLSYIEFSDLE 3334
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 142/331 (42%), Gaps = 85/331 (25%)
Query: 4 RCVNLTKVCDGKTDCPNGADE---GPG----CDLAECKHKFGLCSNTCHPTPLGALCTCP 56
C+ L+ VCD DC N DE PG CD C+H N H G +C+C
Sbjct: 3878 HCIPLSYVCDNFDDCGNHFDETGCNPGAERTCDENICEH------NCTHLKEGGFICSCR 3931
Query: 57 PGEILSN-DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY--VLEYDNHTCKAINH 113
PG D +C D+NECEQ G C Q C N+KGSY C C +G+ V +++ C A +
Sbjct: 3932 PGYSAGPVDRNSCVDINECEQFGVCPQDCKNSKGSYECICADGFRSVGDHEGKQCAADGN 3991
Query: 114 SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDW----IG--------- 160
L+ N E+ D+ + + ++ + YDW IG
Sbjct: 3992 PPILLLPDNVRIRKYNLSSEQYSDY------LDNQEHIQAIDYDWDPEGIGLSIIYYTVL 4045
Query: 161 -----------GHIYWLDSRLNR-IEVCDEN------------------------GTNRI 184
+I DS N ++ D N TNRI
Sbjct: 4046 GQGSVFGSIKRAYIPTFDSSGNNPVKEVDLNLKYIVRPDGIAVDWVGRHIYWSDASTNRI 4105
Query: 185 VLAK-----------DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
+AK + QP ++++P G +++WTDWG P+IER MDG R T+I
Sbjct: 4106 EVAKLDGRYRKWLISTQLDQPAAVVVNPKLG--FMYWTDWGSQPKIERAWMDGQQRQTLI 4163
Query: 234 STKIYWPNGLTLD-IATRRVYFADSKLDFID 263
S + WP GL++D + R+Y+ DSK + I+
Sbjct: 4164 SDDLGWPTGLSIDYLNNDRIYWCDSKENIIE 4194
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 110/468 (23%), Positives = 180/468 (38%), Gaps = 122/468 (26%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G+ L DN TC N +F+++S + HS
Sbjct: 1969 CQQICLPIPGGLFSCACATGFKLNPDNRTCSPYN---SFIVVSMLTAIKGFSLEASDHSE 2025
Query: 127 LVADLEEKGKDH---------------------RAQD--------------IVVSGL--D 149
+ L +G++ R+Q+ I+ +G+ +
Sbjct: 2026 AMVPLAGQGRNALHVDVHMPSGFIYWCDFSSTVRSQNAIRRIKPDGSSFRNIITNGIGRN 2085
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ G++Y+ ++ + IEV N T R VL K + PR +++DP R+
Sbjct: 2086 GVRGIAIDWVAGNLYFTNAFVTETFIEVLRINSTYRRVLLKTTVDMPRHLVVDPK--NRY 2143
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
LFW D+G+NP+IER +D +NR+ ++S I P GL +D + +Y+ D LD I S
Sbjct: 2144 LFWADYGQNPKIERAFLDCTNRTVLVSEGIVTPRGLAVDHSNGYIYWVDDSLDIIARISH 2203
Query: 268 E------IKTNVNYSTIF------RKLYWID-----------EGGNGVPLKIGKANMDGS 304
E I+ Y T + + W+D E GN P ++ + N+D
Sbjct: 2204 EGGDTEMIRYGSRYPTPYGITIFGDSMIWVDRNLRKIYQASKEPGNTDPPRVIRDNIDWL 2263
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR---------------- 348
+ + Q L + + C+ F + P+
Sbjct: 2264 RDVTIFNAQFQPRLPEQVNYNPCLENNGGCSHLCFALPGQQAPKCGCAFGELESDGKSCA 2323
Query: 349 --------------IERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVYFADSKLDFI 392
+ I +D N S T I + LD + R+YF S
Sbjct: 2324 ISTENYLIFASENSLRSISLDPENHSPPFRTLIVPRTAVALDYDSINNRIYFTQSST--- 2380
Query: 393 DFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVP-ALALDLENGMLYYS 439
GR + + V + D G+P +A D N +YYS
Sbjct: 2381 ------SNGRISYVSLLAGVTSPTVIATDVGIPDGIAFDWINSRIYYS 2422
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 100/194 (51%), Gaps = 25/194 (12%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ + + + +G+A+DWI IY+ D I +G+N V+A+ + +PR ++LDP
Sbjct: 2399 VIATDVGIPDGIAFDWINSRIYYSDFMNQTINSIAVDGSNHTVVAR--VPRPRAIVLDPC 2456
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDW N +IER + G+ R I++T + WPNGLTLD +Y+AD+ L I
Sbjct: 2457 RG--YMYWTDWSTNAKIERATLGGNFRIHIVNTSLVWPNGLTLDYDEDWLYWADANLQKI 2514
Query: 263 DCKSLEIKTNVNYSTIF-------------RKLYWIDEGGNGVPLKIGKAN-MDGSNASI 308
+ SL T N I + +YW D I +AN DGS ++
Sbjct: 2515 ERSSL---TGTNREVIVSTAIHPFAMTVYDQHIYWTDLSTR----TIYRANKYDGSEQTV 2567
Query: 309 LVSGQLYEALALDL 322
+++ L + + +
Sbjct: 2568 MITNLLLRPMDIHV 2581
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 180/466 (38%), Gaps = 76/466 (16%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGP----GCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+RC+ ++C+ + DC +G+DE P C C N H PL +C
Sbjct: 3833 NRCIYSHELCNQEDDCGDGSDEKPEHCMNSTTKPCVEDEFKCGNG-HCIPLSYVCDNFDD 3891
Query: 59 EILSNDSVTCQDMNE--CEQPGYCSQMCTNTK-GSYICSCNEGYVL-EYDNHTCKAINHS 114
D C E C++ C CT+ K G +ICSC GY D ++C IN
Sbjct: 3892 CGNHFDETGCNPGAERTCDE-NICEHNCTHLKEGGFICSCRPGYSAGPVDRNSCVDINEC 3950
Query: 115 AAFLIISN-------RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD 167
F + + + AD DH + G + L D + Y L
Sbjct: 3951 EQFGVCPQDCKNSKGSYECICADGFRSVGDHEGKQCAADGNPPIL-LLPDNVRIRKYNLS 4009
Query: 168 SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227
S + D + A D P G+ G +++T G+ + GS
Sbjct: 4010 SE----QYSDYLDNQEHIQAIDYDWDPEGI------GLSIIYYTVLGQG------SVFGS 4053
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDE 287
+ I T N ++ Y +D + R +YW D
Sbjct: 4054 IKRAYIPTFDSSGNNPVKEVDLNLKYIVRPDGIAVD-------------WVGRHIYWSDA 4100
Query: 288 GGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
N +I A +DG L+S QL + A+ + + + ++WTDWG P
Sbjct: 4101 STN----RIEVAKLDGRYRKWLISTQLDQPAAVVVNPKLGF---------MYWTDWGSQP 4147
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IER MDG R T+IS + WP GL++D + R+Y+ DSK + I+ +DGT R+ V
Sbjct: 4148 KIERAWMDGQQRQTLISDDLGWPTGLSIDYLNNDRIYWCDSKENIIESMKHDGTDRRLV- 4206
Query: 407 LIDLMVEFTNDLMGDNGVPALALDLENGMLYY-STEGAEFLKTPLF 451
+ G P +LD+ G LY+ S E E K F
Sbjct: 4207 ------------SSEVGNP-YSLDVFEGHLYWTSKEKGEVWKEDKF 4239
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 99/239 (41%), Gaps = 55/239 (23%)
Query: 178 ENGTNRIVLAKDNITQPRGMMLDP---------SPGTRWLFWTDWGENPRIERIGM-DGS 227
EN I L +N + P ++ P S R F N RI + + G
Sbjct: 2335 ENSLRSISLDPENHSPPFRTLIVPRTAVALDYDSINNRIYFTQSSTSNGRISYVSLLAGV 2394
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDE 287
T+I+T + P+G+ D R+Y++D F++
Sbjct: 2395 TSPTVIATDVGIPDGIAFDWINSRIYYSD----FMN------------------------ 2426
Query: 288 GGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
I +DGSN +++ A+ LD C +++WTDW N
Sbjct: 2427 ------QTINSIAVDGSNHTVVARVPRPRAIVLD-----------PCRGYMYWTDWSTNA 2469
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IER + G+ R I++T + WPNGLTLD +Y+AD+ L I+ + GT R+ ++
Sbjct: 2470 KIERATLGGNFRIHIVNTSLVWPNGLTLDYDEDWLYWADANLQKIERSSLTGTNREVIV 2528
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ + ++ VE LA+DWI ++YW D R I V +R + + N+ PR +++ P
Sbjct: 760 LTANRVESVEDLAFDWISKNLYWTDPRYRSISVMKLADKSRRAIVQ-NLNNPRSIVVHPV 818
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKL 259
G L+W D + +IE DG +R T+ ++ P GLT I YF D +L
Sbjct: 819 IGALRLYWVDAFFD-KIEHSSFDGLDRRTLERINQMTHPFGLT--IFENYAYFTDWRL 873
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 82/201 (40%), Gaps = 42/201 (20%)
Query: 213 WGENP-RIERIGMDGSNRSTIISTKIYW-PNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DG+NR+ + P L LD +R +Y+ + I+ +L+ +
Sbjct: 1734 WVENPGEIHRVKSDGTNRTVFAPASVLGSPISLALDWISRNLYYTNPGTQSIEVLTLQGE 1793
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
+RK ++G L +G L + +D NG LY
Sbjct: 1794 RR------YRKTLITNDG---TSLAVG----------------LPVGITIDPANGKLY-- 1826
Query: 331 TLKCTRWLFWTDWGEN----PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 386
WTD G ++ MDGS T+ + + +T+DI +++Y+A
Sbjct: 1827 ---------WTDRGTESGIPAKVASANMDGSQIKTLFTGNLDHLEFITIDIKEQKLYWAV 1877
Query: 387 SKLDFIDFCNYDGTGRQQVIL 407
+ I+ N DGT R V+
Sbjct: 1878 TSTGVIERGNVDGTNRMIVVF 1898
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 151/413 (36%), Gaps = 115/413 (27%)
Query: 28 CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTC-QDMNECEQPGYCS----- 81
C A C H L S+ P C CP G LS+DS+ C +D EQP +
Sbjct: 1644 CASAPCSHLCLLSSSG----PRFYSCACPSGWTLSSDSINCLRD----EQPFLITVRMNI 1695
Query: 82 --------QMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEE 133
+ TN I GY +++D+ S F+ +E
Sbjct: 1696 IYGISLNPEEKTNDAMVPIAGIQNGYDVDFDD--------SEQFIYW----------VEN 1737
Query: 134 KGKDHRAQD--------IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-- 183
G+ HR + S L LA DWI ++Y+ + IEV G R
Sbjct: 1738 PGEIHRVKSDGTNRTVFAPASVLGSPISLALDWISRNLYYTNPGTQSIEVLTLQGERRYR 1797
Query: 184 -IVLAKDN----ITQPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRSTIIS 234
++ D + P G+ +DP+ G L+WTD G ++ MDGS T+ +
Sbjct: 1798 KTLITNDGTSLAVGLPVGITIDPANGK--LYWTDRGTESGIPAKVASANMDGSQIKTLFT 1855
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
+ +T+DI +++Y+A + I+
Sbjct: 1856 GNLDHLEFITIDIKEQKLYWAVTSTGVIE------------------------------- 1884
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+ N+DG+N I+V L + + + LYY+ + IER+
Sbjct: 1885 ---RGNVDGTNRMIVVF-HLSHPWGIAVHDSFLYYTD------------KDYEVIERV-- 1926
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
D S + ++ + PN L RVY+ D+ + C+ + QQ+ L
Sbjct: 1927 DKSTGANKVALRDNVPNLRCL-----RVYYRDNAAGSSNGCSNNVNACQQICL 1974
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 14/103 (13%)
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
+FWTD ++ ++ + +DG+N +++ + P L +D ++Y ++ ++ ID N
Sbjct: 420 IFWTDTVQD-KVFSVDIDGANIQEVLNVSVDAPENLAVDWVNNKLYVVETSVNRIDMVNL 478
Query: 398 DGTGRQQVILIDLMVEFTNDLMGDNGVP-ALALDLENGMLYYS 439
DGT R +I +L G P +ALD G L++S
Sbjct: 479 DGTNRVTLITENL------------GNPRGIALDPTIGYLFFS 509
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 63/155 (40%), Gaps = 13/155 (8%)
Query: 105 NHTCKA-INHSAAFLIISNRHSILVADLEEKGKDHRAQ-------DIVVSGLDLVEGLAY 156
NHT A + A ++ R + D K RA IV + L GL
Sbjct: 2438 NHTVVARVPRPRAIVLDPCRGYMYWTDWSTNAKIERATLGGNFRIHIVNTSLVWPNGLTL 2497
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
D+ +YW D+ L +IE GTNR V+ I P M + + ++WTD
Sbjct: 2498 DYDEDWLYWADANLQKIERSSLTGTNREVIVSTAI-HPFAMTV----YDQHIYWTDLSTR 2552
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
DGS ++ +I+ + P + + + +R+
Sbjct: 2553 TIYRANKYDGSEQTVMITNLLLRPMDIHVLVKSRQ 2587
>gi|395519723|ref|XP_003763992.1| PREDICTED: low-density lipoprotein receptor-related protein 2
[Sarcophilus harrisii]
Length = 4631
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/299 (41%), Positives = 167/299 (55%), Gaps = 40/299 (13%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCD DCPNGADE P C+ C C++ C P GA C CP G L+ND
Sbjct: 1298 CVNLSSVCDDIPDCPNGADESPVCNQESCSDNNAGCTHECIQGPFGAQCLCPFGYQLTND 1357
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D+NECE PG+CSQ C N +GS C C+EGY+LE + TCK L++++R+
Sbjct: 1358 SKTCEDINECETPGFCSQHCYNERGSSRCWCDEGYILEGNGKTCKVAASGNLLLLVTSRN 1417
Query: 125 SILVADLEEKGKD-----HRAQDIVV---------------------------------- 145
I+ ++ +G + + IV
Sbjct: 1418 QIVADNITSQGDNIYSLIRDGEHIVAIDFDSLSGRIFWSDIRQDKIWSAFQNGTDRKVIF 1477
Query: 146 -SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
SG+ + E +A DW+G ++YW D L IEV +G +R VL +N+T PRG++LDP
Sbjct: 1478 DSGVTVTESIAVDWVGRNLYWTDYVLETIEVSKMDGNHRTVLISENVTNPRGLVLDPRID 1537
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+FW+DWG NPRIER MDG+NR+ II KIYWPNGL +D + +YF D+ LD+ID
Sbjct: 1538 AHLMFWSDWGRNPRIERASMDGTNRTVIIKDKIYWPNGLAIDYPNKLLYFMDAYLDYID 1596
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 144/478 (30%), Positives = 219/478 (45%), Gaps = 106/478 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
C+ + K+CDG DCP+G DE G C++++C C + CH +P G C CP G
Sbjct: 251 HCIPIEKLCDGTLDCPSGEDETNVTAGRHCNISQCATL--SCQHRCHSSPTGGTCYCPQG 308
Query: 59 EIL-SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
++ SNDS TC D ++C+ G C Q+C + G + C C EGYVLE H ++ A
Sbjct: 309 YVINSNDSRTCVDFDDCKMWGVCDQICEDRIGHHQCHCMEGYVLEQHRHCRANVSSGVAS 368
Query: 118 LIISNRHSILVADLE---------------EKGKD-----HR------AQDIVVS----- 146
LI SN +L+ D+ G D H+ QD V S
Sbjct: 369 LIFSNGRDLLIGDIHGMSFRTLVQSQNRGVAVGVDFHFYLHKIFWTDTVQDKVFSVGIDG 428
Query: 147 ---------GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+D E LA DW+ +Y +++ +NRI++ + +GTNR+ L +N+ PRG+
Sbjct: 429 ANIQEVLNVSVDTPENLAVDWVNNKLYVVETSVNRIDMVNLDGTNRVTLITENLGNPRGI 488
Query: 198 MLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
LDP+ G +LF++DW +P++ER MDG+NR +I TK+ WP G+TLDI ++RVY+
Sbjct: 489 ALDPTVG--YLFFSDWDSLSGDPKVERAFMDGTNRQDLIKTKLGWPAGITLDIISKRVYW 546
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
D + D+I+ V Y + RK I GG +P G + L
Sbjct: 547 VDCRFDYIE--------TVTYDGLQRKT--IAHGGAIIPHPYGIS--------------L 582
Query: 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
+E +F+TDW ++ SN I + + P G+T
Sbjct: 583 FE-------------------HNVFFTDWTRLAVMKANKFSESNPQIIYQSSLR-PYGVT 622
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLE 432
+ A R+ Y + C + G QV ++ + ND +G L DL
Sbjct: 623 IYHALRQPYVRNP-------CGNNNGGCDQVCVLSHRTD--NDGLGYRCKCILGFDLH 671
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 109/312 (34%), Positives = 162/312 (51%), Gaps = 51/312 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ +T++C+ DC + +DE GC + EC C + C T CTC PG L +
Sbjct: 3060 CIEMTQICNHLDDCNDNSDEK-GCGINECNDPSISGCDHNCTDTQTSFYCTCLPGYKLMS 3118
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC E P CSQMC NT GSYIC C GY+ E D C+ ++ + +LI SN
Sbjct: 3119 DKKTCDDIDECNETPSVCSQMCENTVGSYICKCARGYIREPDGKRCRQNSNISPYLIFSN 3178
Query: 123 RHSI--LVADLE-----------------------------EKGKDHR-------AQDIV 144
R+ + L AD + EK R + ++
Sbjct: 3179 RYYLRNLTADGQSYSLILQGLGMAVALDFDRVEQRLYWIDLEKQVIERMFLNGTNKETVI 3238
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPRG 196
+ L EGLA DW+ +YWLD+ LN + V + +G R LA+ + PRG
Sbjct: 3239 NNNLPAGEGLAVDWVARKLYWLDAYLNCLFVANLDGRFRRKLAEHCVDSNNTFCFQHPRG 3298
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
++L P G ++WTDW + P I R+GMDG+N++ II+TK+ WPNG+T+D ++Y++D
Sbjct: 3299 IVLHPKYGQ--VYWTDWADRPYIGRVGMDGTNKTVIITTKLSWPNGITIDYTNDKLYWSD 3356
Query: 257 SKLDFIDCKSLE 268
+ L +I+ LE
Sbjct: 3357 AHLSYIEFSDLE 3368
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 150/325 (46%), Gaps = 73/325 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADE---GPG----CDLAECKHKFGLCSNTCHPTPLGALCTCP 56
C+ L+ VCD DC + DE PG CD C+H C+N G +C+C
Sbjct: 3912 HCIPLSYVCDNFDDCGDHFDETGCNPGAERTCDENICEHN---CTNL---NEGGFICSCR 3965
Query: 57 PGEILSN-DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY--VLEYDNHTCKAINH 113
PG S D +C D+NECEQ G C Q C N+KGSY C C +G+ V +++ C A
Sbjct: 3966 PGYNASAIDRNSCIDINECEQFGVCPQDCRNSKGSYECICADGFRSVGDHEGKQCAADGT 4025
Query: 114 SAAFLI-------------------ISNRHSILVADLE----------------EKGKDH 138
L+ + N+ I D + +G D
Sbjct: 4026 PPLLLLPDNVRIRKYNLSSEQYSDYLDNQEHIQAIDYDWDPEGIGLSVVYYTVLGQGSDF 4085
Query: 139 -------------------RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDEN 179
+ D+ + + +G+A DW+G HIYW D+ NRIEV +
Sbjct: 4086 GSIKRAYIPTFDSSGNNPVKEVDLNLKYIMRPDGIAVDWVGRHIYWSDASTNRIEVAKLD 4145
Query: 180 GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYW 239
G R L + QP ++++P G +++WTDWG P+IER MDG R T++S + W
Sbjct: 4146 GRYRKWLVSTQLDQPAAVVVNPKLG--FMYWTDWGRQPKIERAWMDGQQRQTLVSNDLGW 4203
Query: 240 PNGLTLD-IATRRVYFADSKLDFID 263
P GL++D + R+Y++DSK + I+
Sbjct: 4204 PTGLSIDYLNNDRIYWSDSKENIIE 4228
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 105/468 (22%), Positives = 179/468 (38%), Gaps = 121/468 (25%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C QMC G + C+C G+ L DN TC + +F+++S + HS
Sbjct: 2002 CQQMCLPIPGGLFSCACATGFKLNPDNRTCSPYD---SFIVVSMLTAIKGFSLEASDHSE 2058
Query: 127 LVADLEEKGKDHRAQDIVVS-------------------------------------GLD 149
+ + +G++ D+ V G +
Sbjct: 2059 AMVPMAGRGRNALHVDVHVPSGFIYWCDFSSTVASQNGIRRIKPDGSNFRNVITNGIGQN 2118
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ G++Y+ ++ IEV N T R VL K + PR +++DP R+
Sbjct: 2119 GVRGIAVDWVAGNLYFTNAFGTETLIEVLRINTTYRRVLLKTTVDMPRHIVVDPK--NRY 2176
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
LFW D+G+NP+IER +D +NR+ ++S I P GL +D + +Y+ D LD I +
Sbjct: 2177 LFWADYGQNPKIERAFLDCTNRTVLVSEGIVTPRGLAVDHSNGYIYWVDDSLDIIARINQ 2236
Query: 268 E------IKTNVNYSTIF------RKLYWID-----------EGGNGVPLKIGKANMDGS 304
E ++ Y T + + W+D E GN P ++ + N++
Sbjct: 2237 EGGDTEMVRYGSRYPTPYGITVFENTMIWVDRNLKKIYQASKEPGNTDPPRVIRDNINWL 2296
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR-------IERIG---- 353
+ + Q L ++ + + C+ F + P+ +E G
Sbjct: 2297 RDVTIFNPQFQPLLPEEVNHNPCLENYGGCSHLCFALPRVQAPKCGCAFGELESDGKRCA 2356
Query: 354 ----------MDGSNRSTIISTKIYWPN-----------GLTLDIATRRVYFADSKLDFI 392
++ S RS + + + P L D R+YF S
Sbjct: 2357 ISTENYLIFALENSLRSIYLDPENHSPPFRKLTVPRTAVALDFDSINNRIYFTQSST--- 2413
Query: 393 DFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVP-ALALDLENGMLYYS 439
+GR + + V + D G+P +A D N +YYS
Sbjct: 2414 -----SASGRISYVSLLSGVTSPTVIATDVGIPDGIAFDWINSRIYYS 2456
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 115/255 (45%), Gaps = 50/255 (19%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ + + + +G+A+DWI IY+ D I +G+N V+A+ + +PR ++LDP
Sbjct: 2433 VIATDVGIPDGIAFDWINSRIYYSDYLNQTINSMAVDGSNHTVVAR--VPRPRAIVLDPC 2490
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDW N +IER + G+ R I++T + WPNGLTLD +Y+AD+ L
Sbjct: 2491 RG--YMYWTDWSTNAKIERATLGGNFRIHIVNTSLVWPNGLTLDYDEDWLYWADANLQ-- 2546
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
KI ++++ G+N +++S ++ A+ +
Sbjct: 2547 --------------------------------KIERSSLTGANREVIISTAIH-PFAMTV 2573
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+ +Y WTDW DGS + +I P + + + +R+
Sbjct: 2574 YDQHIY-----------WTDWNTRTIYRANKYDGSEQIVMIMNLPLRPMDIHVLVKSRQQ 2622
Query: 383 YFADSKLDFIDFCNY 397
+ F C++
Sbjct: 2623 QCPNPCSQFNGGCSH 2637
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 117/471 (24%), Positives = 180/471 (38%), Gaps = 86/471 (18%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGP----GCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+RC+ ++C+ + DC +G+DE C C N H PL +C
Sbjct: 3867 NRCIYSHELCNQEDDCGDGSDEKVEYCMNATSKPCTEDEFKCGNG-HCIPLSYVCDNFDD 3925
Query: 59 EILSNDSVTCQDMNE--CEQPGYCSQMCTN-TKGSYICSCNEGY-VLEYDNHTCKAINHS 114
D C E C++ C CTN +G +ICSC GY D ++C IN
Sbjct: 3926 CGDHFDETGCNPGAERTCDE-NICEHNCTNLNEGGFICSCRPGYNASAIDRNSCIDINEC 3984
Query: 115 AAFLIISN-------RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD 167
F + + + AD DH + G + L D + Y L
Sbjct: 3985 EQFGVCPQDCRNSKGSYECICADGFRSVGDHEGKQCAADGTPPLL-LLPDNVRIRKYNLS 4043
Query: 168 SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227
S + D + A D P G+ L T +D+G R D S
Sbjct: 4044 SE----QYSDYLDNQEHIQAIDYDWDPEGIGLSVVYYTVLGQGSDFGSIKRAYIPTFDSS 4099
Query: 228 NRSTIISTK-----IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
+ + I P+G+ +D R +Y++D+ +
Sbjct: 4100 GNNPVKEVDLNLKYIMRPDGIAVDWVGRHIYWSDASTN---------------------- 4137
Query: 283 YWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD 342
+I A +DG LVS QL + A+ + + + ++WTD
Sbjct: 4138 ------------RIEVAKLDGRYRKWLVSTQLDQPAAVVVNPKLGF---------MYWTD 4176
Query: 343 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDFCNYDGTG 401
WG P+IER MDG R T++S + WP GL++D + R+Y++DSK + I+ +DGT
Sbjct: 4177 WGRQPKIERAWMDGQQRQTLVSNDLGWPTGLSIDYLNNDRIYWSDSKENIIESMRHDGTD 4236
Query: 402 RQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYY-STEGAEFLKTPLF 451
R+ V + G P +LD+ G LY+ S E E K F
Sbjct: 4237 RRLV-------------SAEVGNP-YSLDVFEGHLYWTSKERGEVWKEDKF 4273
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 16/181 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I + ++ VE LA+DWI ++YW D R I V +R + + N+ PR +++ P
Sbjct: 751 ITANRVESVEDLAFDWISKNLYWTDPRYRSISVMRLVDKSRRAIVQ-NLNNPRSIVVHPV 809
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD------ 256
G ++FWTDW +I R DGS+ I++T + WPNGL LD R+Y+ D
Sbjct: 810 IG--YIFWTDWYRPAKIMRAWSDGSHSVPIVNTTLGWPNGLALDWGALRLYWVDAFFDKI 867
Query: 257 --SKLDFIDCKSLEIKTNVNYS---TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
S D +D ++LE + + TIF + + G +++ K DG +I+
Sbjct: 868 EHSTFDGLDRRTLERIHQMTHPFGLTIFENYAYFTDWRLGGIVRVRKT--DGGEMTIIRR 925
Query: 312 G 312
G
Sbjct: 926 G 926
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 45/183 (24%)
Query: 224 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLY 283
+ G T+I+T + P+G+ D R+Y++D
Sbjct: 2425 LSGVTSPTVIATDVGIPDGIAFDWINSRIYYSD--------------------------- 2457
Query: 284 WIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
++++ I +DGSN +++ A+ LD C +++WTDW
Sbjct: 2458 YLNQ-------TINSMAVDGSNHTVVARVPRPRAIVLD-----------PCRGYMYWTDW 2499
Query: 344 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403
N +IER + G+ R I++T + WPNGLTLD +Y+AD+ L I+ + G R+
Sbjct: 2500 STNAKIERATLGGNFRIHIVNTSLVWPNGLTLDYDEDWLYWADANLQKIERSSLTGANRE 2559
Query: 404 QVI 406
+I
Sbjct: 2560 VII 2562
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
++FWTDW +I R DGS+ I++T + WPNGL LD R+Y+ D+ D I+
Sbjct: 812 YIFWTDWYRPAKIMRAWSDGSHSVPIVNTTLGWPNGLALDWGALRLYWVDAFFDKIEHST 871
Query: 397 YDGTGRQQVILIDLMVE 413
+DG R+ + I M
Sbjct: 872 FDGLDRRTLERIHQMTH 888
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 80/201 (39%), Gaps = 42/201 (20%)
Query: 213 WGENP-RIERIGMDGSNRSTIISTKIYW-PNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DG+NR+ + P L LD +R +Y+ + I+ +L +
Sbjct: 1767 WVENPGEIHRVKSDGTNRTVFAPASVLGSPASLALDWISRNLYYTNPGTQSIEVLTLRGE 1826
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
T S I +G PL +G + +D NG +Y
Sbjct: 1827 TKYRKSLI---------TNDGTPLAVG----------------FPVGITIDPANGKMY-- 1859
Query: 331 TLKCTRWLFWTDWGEN----PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 386
WTD G ++ MDGS T+ + + +T+DI +++Y+A
Sbjct: 1860 ---------WTDHGTESGIPAKVASANMDGSQIKTLFTGNLEHIEFITIDIKEQKLYWAV 1910
Query: 387 SKLDFIDFCNYDGTGRQQVIL 407
+ I+ N DGT R V+
Sbjct: 1911 TGTGVIERGNVDGTNRMIVVF 1931
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 106/493 (21%), Positives = 176/493 (35%), Gaps = 104/493 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSN-TCHPT----------PLGA- 51
C+ VCD + DC +G+DE C C + C N C P P GA
Sbjct: 55 ECIPRAWVCDEEEDCDDGSDEHQQCPGRTCSSQQMTCPNGQCIPNEYRCDRVRDCPDGAD 114
Query: 52 --LCTCPPGEILS-------NDSVTCQDMNECEQPG---YCSQMCTNTK----------G 89
C P E L+ N S C +C C+Q C NT+
Sbjct: 115 ENGCQYPVCEQLTCANGACYNTSQKCDGKVDCRDSSDEVNCTQKCLNTQFQCANGECIPR 174
Query: 90 SYICSCNEGYVLEYDNHTCKAINHSAAFLII-SNR--HSILVADLEEKGKDHRAQDIVVS 146
S++C ++ + D H C F S R H + D ++ +D+ ++ S
Sbjct: 175 SFVCDHDDDCGDQSDEHDCTYQTCRGNFFTCPSGRCIHQSWICDGDDDCEDNADENGCES 234
Query: 147 GLDLVEGLAYDWI---GGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
G E +W GH ++ ++CD GT +D G + S
Sbjct: 235 GHH--ECYPGEWACPGSGHCIPIE------KLCD--GTLDCPSGEDETNVTAGRHCNIS- 283
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+ + S+ Y P G ++ R + +DF D
Sbjct: 284 --------------QCATLSCQHRCHSSPTGGTCYCPQGYVINSNDSR-----TCVDFDD 324
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS-----------G 312
CK + + I EG + +AN+ AS++ S G
Sbjct: 325 CKMWGVCDQICEDRIGHHQCHCMEGYVLEQHRHCRANVSSGVASLIFSNGRDLLIGDIHG 384
Query: 313 QLYEALALDLENGM-----LYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 367
+ L G+ ++ K +FWTD ++ ++ +G+DG+N +++ +
Sbjct: 385 MSFRTLVQSQNRGVAVGVDFHFYLHK----IFWTDTVQD-KVFSVGIDGANIQEVLNVSV 439
Query: 368 YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVP-A 426
P L +D ++Y ++ ++ ID N DGT R +I +L G P
Sbjct: 440 DTPENLAVDWVNNKLYVVETSVNRIDMVNLDGTNRVTLITENL------------GNPRG 487
Query: 427 LALDLENGMLYYS 439
+ALD G L++S
Sbjct: 488 IALDPTVGYLFFS 500
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 22/143 (15%)
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
D K +N++ IF Y++ DG + S+++ G L A+ALD
Sbjct: 3160 DGKRCRQNSNISPYLIFSNRYYLR-----------NLTADGQSYSLILQG-LGMAVALDF 3207
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+ + + L+W D E IER+ ++G+N+ T+I+ + GL +D R++
Sbjct: 3208 D---------RVEQRLYWIDL-EKQVIERMFLNGTNKETVINNNLPAGEGLAVDWVARKL 3257
Query: 383 YFADSKLDFIDFCNYDGTGRQQV 405
Y+ D+ L+ + N DG R+++
Sbjct: 3258 YWLDAYLNCLFVANLDGRFRRKL 3280
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 154/413 (37%), Gaps = 115/413 (27%)
Query: 28 CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTC-QDMNECEQPGYCS----- 81
C A C H L S+ P C CP G LS+DS+ C +D EQP +
Sbjct: 1677 CISAPCSHLCLLSSSG----PRFYSCACPSGWTLSSDSINCLRD----EQPFLITVRKNI 1728
Query: 82 --------QMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEE 133
+ TN I GY +++D+ S F+ +E
Sbjct: 1729 IYGISLNPEEKTNDAMVPIAGIQNGYDVDFDD--------SEQFIYW----------VEN 1770
Query: 134 KGKDHRAQD--------IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI- 184
G+ HR + S L LA DWI ++Y+ + IEV G +
Sbjct: 1771 PGEIHRVKSDGTNRTVFAPASVLGSPASLALDWISRNLYYTNPGTQSIEVLTLRGETKYR 1830
Query: 185 --VLAKDN----ITQPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRSTIIS 234
++ D + P G+ +DP+ G ++WTD G ++ MDGS T+ +
Sbjct: 1831 KSLITNDGTPLAVGFPVGITIDPANGK--MYWTDHGTESGIPAKVASANMDGSQIKTLFT 1888
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
+ +T+DI +++Y+A + G GV
Sbjct: 1889 GNLEHIEFITIDIKEQKLYWAVT-------------------------------GTGV-- 1915
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
I + N+DG+N I+V L G+ Y + L++TD + IER+
Sbjct: 1916 -IERGNVDGTNRMIVV-------FHLSHPWGIAVYDSF-----LYYTD-QDYEVIERV-- 1959
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
D + + ++ + PN L RVY+ D + C+ + QQ+ L
Sbjct: 1960 DKATGANKVALRDNVPNLRCL-----RVYYRDHSAGSSNGCSNNMNTCQQMCL 2007
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ + L G+ D+ +YW D+ L+ IE D G +R + + P + +
Sbjct: 3332 IITTKLSWPNGITIDYTNDKLYWSDAHLSYIEFSDLEGRHRHTVFDGTLPHPFAITIFED 3391
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIIST 235
+FWTDW + +GS R +++T
Sbjct: 3392 T----VFWTDWNTRTVEKGNKYNGSGRMVLVNT 3420
>gi|338715564|ref|XP_001494319.3| PREDICTED: low-density lipoprotein receptor-related protein 2 [Equus
caballus]
Length = 4905
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 129/371 (34%), Positives = 192/371 (51%), Gaps = 61/371 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VC+G +DCPNG DE P C+ C C++ C P GA C CP G +L+ND
Sbjct: 1574 CVNLSAVCNGISDCPNGTDESPLCNQESCSDSNAGCTHQCIQGPFGAQCLCPLGFLLAND 1633
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++ECE PGYCSQ C N +GS+ C C++ Y+L+ D TCK + L++++R+
Sbjct: 1634 SKTCEDIDECEIPGYCSQHCYNMRGSFRCWCDKEYMLDTDGRTCKVTASESLLLLVASRN 1693
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+ ++ + G D +
Sbjct: 1694 QIVADNITSQVHNIYSLIQDGSHIVAIDFDSVSGRVFWSDGTQGKIWSAFQNGTDKKV-- 1751
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ SG+ + E + DW+G H+YW + L IEVC +G++R VL +N+T PRG+ LDP
Sbjct: 1752 VLDSGVTMTESIVVDWVGRHLYWTNYALETIEVCKLDGSHRTVLISENVTNPRGLALDPR 1811
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+FW+DWG +PRIER MDGS R+ I+ KI+WPNGLT+D R +YF D+ LD+I
Sbjct: 1812 ISEHLMFWSDWGHHPRIERASMDGSLRTVIVQDKIFWPNGLTIDYPNRLLYFMDAYLDYI 1871
Query: 263 D-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL 309
D L ++ + +YW D + V I G N S++
Sbjct: 1872 DFCDYDGQHRRQVIASDLILRHPYALTVFEDSVYWTDRATHQV---IQANKWHGWNQSVI 1928
Query: 310 VSGQLYEALAL 320
+ +Y+ L +
Sbjct: 1929 MY-NVYQPLGI 1938
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 175/410 (42%), Gaps = 98/410 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ + KVC+ DC + +DE GC + EC C C T C+C PG L +
Sbjct: 3336 CIEMVKVCNHLDDCLDNSDEK-GCGINECNDASLSGCDQNCTDTLTSFYCSCHPGYKLMS 3394
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC E P CSQ C N GSYIC C GY+ E + C+ + +LI SN
Sbjct: 3395 DKRTCNDIDECKETPFVCSQKCENVIGSYICKCAPGYIREPNGKNCRQNSDIEPYLIFSN 3454
Query: 123 RHSI----------------------LVADLEEK-----------------GKDHRAQDI 143
R+ + L D EK K +R + +
Sbjct: 3455 RYYLRNLTTDGHYYSLILQGLGNAVALDFDRVEKRLYWIDRENKVIERMFLNKTNR-ETV 3513
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPR 195
+ L E LA DW+ +YWLD+ L + V + NG R LA+ + PR
Sbjct: 3514 INHRLPAAESLAVDWVTRKLYWLDTYLKCLSVSELNGQYRRKLAEHCVDANNTLCFENPR 3573
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G++L P G +++W DW I R+GMDG+N+S IISTKI WPNG+T+D +Y+A
Sbjct: 3574 GIVLHPQYG--YVYWADWASRAYIGRVGMDGTNKSVIISTKIVWPNGITIDYTNDLLYWA 3631
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ L +I+ LE G++ + G L
Sbjct: 3632 DAHLGYIEYSDLE----------------------------------GNHRHTVYDGMLP 3657
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ + +Y WTDW + DGS+R +++T
Sbjct: 3658 HPFAITIFEDTIY-----------WTDWNTRTVEKGNKYDGSDRMVLVNT 3696
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 175/388 (45%), Gaps = 110/388 (28%)
Query: 5 CVNLTKVCDGKT---------------------------------------------DCP 19
C++ VCDG+ DCP
Sbjct: 482 CISQDWVCDGEDDCTDNGDEDGCESSTHHIHKCYPGEWACPGSGKCIPIGKVCDGTLDCP 541
Query: 20 NGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSV-TCQDMNE 73
G DE G CD+ C C CH +P G +C CP G I+ +S C D ++
Sbjct: 542 AGEDESNITQGQNCDVNLC--PLLGCEYQCHMSPHGGMCYCPSGFIVDQNSTRNCVDFDD 599
Query: 74 CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA-AFLIISNRHSILVADLE 132
CE G C QMC + G + C C EGY+LE+ H CKA S A +I SN +L+ D+
Sbjct: 600 CEIWGICDQMCEDRVGHHQCHCAEGYILEHQRH-CKANTSSGEASVIFSNGRDLLIGDIH 658
Query: 133 EK---------------GKD-----HRA--------------------QDIVVSGLDLVE 152
+ G D HR Q+++ +D E
Sbjct: 659 GRTFEMLVQSQNHGVAVGVDFHYHLHRVFWTDTVQDKVFSVDVNGLHIQEVLNVSVDDPE 718
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
LA DW+ +Y +++R+N IE+ + +G+ R++L +N+ PRG+ LDP+ G +LF++D
Sbjct: 719 NLAVDWVNNKLYLVETRVNCIEMVNLDGSQRVILITENLGHPRGIALDPTVG--YLFFSD 776
Query: 213 WGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEI 269
W P++ER MDG+NR ++ TK+ WP G+TLD+ ++RVY+ D + D+I+
Sbjct: 777 WESLSGGPKVERAFMDGTNRKDLVKTKLGWPAGITLDMVSKRVYWVDCRFDYIE------ 830
Query: 270 KTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
V Y I RK + GG+ VP G
Sbjct: 831 --TVTYDGIQRKT--VVHGGSLVPHPFG 854
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 140/552 (25%), Positives = 223/552 (40%), Gaps = 144/552 (26%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+C+ + KVCDG DCP G DE G CD+ C C CH +P G +C CP G
Sbjct: 526 KCIPIGKVCDGTLDCPAGEDESNITQGQNCDVNLCP--LLGCEYQCHMSPHGGMCYCPSG 583
Query: 59 EILSNDSV-TCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA-A 116
I+ +S C D ++CE G C QMC + G + C C EGY+LE+ H CKA S A
Sbjct: 584 FIVDQNSTRNCVDFDDCEIWGICDQMCEDRVGHHQCHCAEGYILEHQRH-CKANTSSGEA 642
Query: 117 FLIISNRHSILVADLEEK---------------GKD-----HRA---------------- 140
+I SN +L+ D+ + G D HR
Sbjct: 643 SVIFSNGRDLLIGDIHGRTFEMLVQSQNHGVAVGVDFHYHLHRVFWTDTVQDKVFSVDVN 702
Query: 141 ----QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
Q+++ +D E LA DW+ +Y +++R+N IE+ + +G+ R++L +N+ PRG
Sbjct: 703 GLHIQEVLNVSVDDPENLAVDWVNNKLYLVETRVNCIEMVNLDGSQRVILITENLGHPRG 762
Query: 197 MMLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNR------------------------ 229
+ LDP+ G +LF++DW P++ER MDG+NR
Sbjct: 763 IALDPTVG--YLFFSDWESLSGGPKVERAFMDGTNRKDLVKTKLGWPAGITLDMVSKRVY 820
Query: 230 -------------------STIISTKIYWPNGLTLDIATRRVYFAD-SKLDFIDC-KSLE 268
T++ P+ + + V+F D +K+ + K E
Sbjct: 821 WVDCRFDYIETVTYDGIQRKTVVHGGSLVPHPFGISLFEDNVFFTDWTKMAVMKANKFTE 880
Query: 269 IKTNVNYSTIFRKL-----------YWIDEGG--NGVPLKI----GKANMDG----SNAS 307
Y T R Y + G NG +I + + DG S
Sbjct: 881 TNPETYYRTSLRPFGVTVYHPLRQPYVRNPCGDNNGGCEQICVLSHRTDNDGLGYRCKCS 940
Query: 308 ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 367
+ E + ++ +++ S + F E+ + G N S+ +
Sbjct: 941 LGFDMDADERHCVAVKQFLIFSSEVAVRGIPFTLSTQEDVMVPMTG----NPSSFV---- 992
Query: 368 YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPAL 427
G+ D ++F+D+ D I DGTGR+ ++ MVE GV +L
Sbjct: 993 ----GIDFDAQESTIFFSDTSKDMIFKQKIDGTGRE--VVTASMVE---------GVESL 1037
Query: 428 ALDLENGMLYYS 439
+ D + LY++
Sbjct: 1038 SFDWISKNLYWT 1049
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 184/462 (39%), Gaps = 114/462 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGA-LCTCPPGEIL 61
C++ VCD DC + DE GC+ + + LC + C G +CTC PG
Sbjct: 4188 HCISQHLVCDDFDDCGDHFDET-GCNTGKERSCAENLCEHNCTQLKEGGFICTCRPGFKA 4246
Query: 62 SN-DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH--TCKAINHSAAFL 118
S D +C D+NECEQ G C Q C NTKGSY CSC +G+ D++ C A + FL
Sbjct: 4247 STLDRNSCDDINECEQFGVCPQNCHNTKGSYECSCAQGFKSMGDDYGKRCAADGNPPLFL 4306
Query: 119 IISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDE 178
+ N EK D+ + + +D YDW
Sbjct: 4307 LAENVRIRKYNLSSEKYADYLEDEEHIQAID------YDW-------------------- 4340
Query: 179 NGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK-- 236
P G+ L T +++G R + N + +
Sbjct: 4341 --------------DPDGIDLSVVYYTVLGHGSNFGAIKRAYIPNFESENNNIVQEVNLD 4386
Query: 237 ---IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
I P+GL +D R +Y++D+K
Sbjct: 4387 LKYIAQPDGLAVDWVGRHIYWSDAKSQ--------------------------------- 4413
Query: 294 LKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
+I A +DG L+S QL + A+ ++ + G++Y WTDWG+ P+IE
Sbjct: 4414 -RIEVAKLDGRYRKWLISTQLDQPAAVVVNPKLGLMY-----------WTDWGKEPKIES 4461
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
MDG +R ++ + WP GL++D + ++Y++D K + I+ +DGT R+ V+
Sbjct: 4462 AWMDGQHRIILVKEDLGWPTGLSIDYLNNDQIYWSDFKENVIETMKHDGTDRRTVV---- 4517
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYY-STEGAEFLKTPLF 451
+ V +LD+ G LY+ S + E K F
Sbjct: 4518 ----------NAAVNPYSLDIFEGELYWISKDKGEVWKQDKF 4549
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 116/255 (45%), Gaps = 50/255 (19%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++VS + +G+A+DWI IY+ D I E+G+ R V+A ++++P ++LDP
Sbjct: 2709 VIVSDIGAADGIAFDWINRRIYYSDYTNQTINSVAEDGSKRTVIA--HVSKPGAIVLDPC 2766
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDW N +IER + G+ R I+++ + WPNGL LD +Y+AD+ L
Sbjct: 2767 RG--YMYWTDWDTNAKIERATLGGNFRVPIVNSSLVWPNGLALDTEEDLLYWADASL--- 2821
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
LKI ++ + G ++VS +
Sbjct: 2822 -------------------------------LKIERSTLTGLEREVIVSATFHPF----- 2845
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G+ Y ++++WTD+ DGS + + + + P G+ + + ++
Sbjct: 2846 --GLTLYG-----QYIYWTDFSAKKVYRANKYDGSGQMAMTTRFSFEPEGIRVVVKDQQR 2898
Query: 383 YFADSKLDFIDFCNY 397
++ +F C++
Sbjct: 2899 QCSNPCDEFNGGCSH 2913
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 106/235 (45%), Gaps = 57/235 (24%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G+ L D TC +F+++S + HS
Sbjct: 2278 CQQICLPVPGGLFSCACATGFKLNPDQQTCSPYE---SFIVVSMLSAIRGFNLDLSDHSE 2334
Query: 127 LVADLEEKGKDHRAQDIVVS-------------------------------------GLD 149
+ + +G++ D+ VS G +
Sbjct: 2335 AMVPVAGQGRNALHVDVDVSSGFIYWCDFSSSVADYNAIRRIKPDGSAFMNIVTHGIGEN 2394
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ G++Y+ ++ L+ IEV N T R VL K + PR +++DP R+
Sbjct: 2395 GVRGIALDWVAGNLYFTNAFLSETLIEVLRINTTYRRVLLKVIVDMPRDIVVDPK--NRY 2452
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
LFW D+G+NP+IER +D +NR+ ++S I P GL +D +Y+ D LD I
Sbjct: 2453 LFWADYGQNPKIERSFLDCTNRTVLVSEGIVTPRGLAVDHNNGYIYWVDDSLDMI 2507
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 42/229 (18%)
Query: 74 CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF----------LIISNR 123
CEQ S N Y C C+ G+ ++ D C A+ F +S +
Sbjct: 918 CEQICVLSHRTDNDGLGYRCKCSLGFDMDADERHCVAVKQFLIFSSEVAVRGIPFTLSTQ 977
Query: 124 HSILVADLEEK----GKDHRAQD-------------------------IVVSGLDLVEGL 154
++V G D AQ+ + S ++ VE L
Sbjct: 978 EDVMVPMTGNPSSFVGIDFDAQESTIFFSDTSKDMIFKQKIDGTGREVVTASMVEGVESL 1037
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
++DWI ++YW ++ + V +R + K N+ PR +++ P G ++F++DW
Sbjct: 1038 SFDWISKNLYWTEASYKSVSVMRLADKSRREIIK-NVNNPRSIVVHPIAG--YIFFSDWY 1094
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+I R DGSN I++T + WPNGL +D R+Y+ D+ D I+
Sbjct: 1095 RPAKILRAWSDGSNVVPIVNTTLGWPNGLAIDWGALRLYWVDAFFDKIE 1143
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 15/134 (11%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+ + I R++Y+ D I DGS +++ A+ LD
Sbjct: 2720 IAFDWINRRIYYSDYTNQ----TINSVAEDGSKRTVIAHVSKPGAIVLD----------- 2764
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
C +++WTDW N +IER + G+ R I+++ + WPNGL LD +Y+AD+ L I
Sbjct: 2765 PCRGYMYWTDWDTNAKIERATLGGNFRVPIVNSSLVWPNGLALDTEEDLLYWADASLLKI 2824
Query: 393 DFCNYDGTGRQQVI 406
+ G R+ ++
Sbjct: 2825 ERSTLTGLEREVIV 2838
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 27/185 (14%)
Query: 242 GLTLDIATRRVYFADSKLDFI-----DCKSLEIKT--------NVNYSTIFRKLYWIDEG 288
G+ D ++F+D+ D I D E+ T ++++ I + LYW +
Sbjct: 993 GIDFDAQESTIFFSDTSKDMIFKQKIDGTGREVVTASMVEGVESLSFDWISKNLYWTEAS 1052
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
V + D S I+ + ++ + G ++F++DW +
Sbjct: 1053 YKSVSVM---RLADKSRREIIKNVNNPRSIVVHPIAG-----------YIFFSDWYRPAK 1098
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I R DGSN I++T + WPNGL +D R+Y+ D+ D I+ +DG+ R+ + I
Sbjct: 1099 ILRAWSDGSNVVPIVNTTLGWPNGLAIDWGALRLYWVDAFFDKIEHSTFDGSERRALGHI 1158
Query: 409 DLMVE 413
M
Sbjct: 1159 PQMAH 1163
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 50/238 (21%)
Query: 213 WGENP-RIERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DG+NR+ + +++ L LD +R +Y+ + I+ L ++
Sbjct: 2043 WVENPGEIHRVKTDGTNRTIFVPLSRLGSSMSLALDWISRNLYYTNPGTQSIE--VLTLR 2100
Query: 271 TNVNYSTIFRKLYWIDEG-GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
NV Y RK ++G GV IG + +D NG LY+
Sbjct: 2101 GNVRY----RKTLITNDGTAFGVGFPIG--------------------ITVDPANGKLYW 2136
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
S TD G +I MDG++ T+ + + +TLD+ +++Y+A +
Sbjct: 2137 SDQG-------TDSGVPAKIASANMDGTSSKTLFTGNLEHVEFITLDLQEQKIYWAVTSR 2189
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I+ N DGT R IL++ + + + LYY+ E E ++
Sbjct: 2190 GVIERGNVDGTDR--TILVNYLSH------------PWGIAVHGSFLYYTDEHYEVIE 2233
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 150/417 (35%), Gaps = 125/417 (29%)
Query: 48 PLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCT-NTKGS--YICSCNEGYVLEYD 104
PLG + P + S +S T CS +C +++G Y C C G+ L D
Sbjct: 1935 PLGIVAVHPVKQPHSENSCTF---------APCSHLCLLSSEGPHFYSCVCPSGWSLSQD 1985
Query: 105 NHTCKAINHSAAFLIISNRHSILVAD---------------------------------- 130
+ TC + FLI+ RHSI+
Sbjct: 1986 SATC--VRDDEPFLIVV-RHSIIFGISLNPEVKSNDAMIPIAGIMNGYDVEFDDSEQFIY 2042
Query: 131 -LEEKGKDHRAQD--------IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
+E G+ HR + + +S L LA DWI ++Y+ + IEV G
Sbjct: 2043 WVENPGEIHRVKTDGTNRTIFVPLSRLGSSMSLALDWISRNLYYTNPGTQSIEVLTLRGN 2102
Query: 182 NR---IVLAKDN----ITQPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRS 230
R ++ D + P G+ +DP+ G L+W+D G + +I MDG++
Sbjct: 2103 VRYRKTLITNDGTAFGVGFPIGITVDPANGK--LYWSDQGTDSGVPAKIASANMDGTSSK 2160
Query: 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN 290
T+ + + +TLD+ +++Y+A + I+
Sbjct: 2161 TLFTGNLEHVEFITLDLQEQKIYWAVTSRGVIE--------------------------- 2193
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
+ N+DG++ +ILV+ L + + LYY+ IE
Sbjct: 2194 -------RGNVDGTDRTILVN-YLSHPWGIAVHGSFLYYTD------------EHYEVIE 2233
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
R+ + ++ I GL RVY+ + + C+ + QQ+ L
Sbjct: 2234 RVDKNTGANKVVLRDNIPHLRGL-------RVYYKRDAAESSNGCSNNVNACQQICL 2283
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 71/138 (51%), Gaps = 14/138 (10%)
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG S+++ G L A+ALD + + + L+W D EN IER+ ++ +NR T
Sbjct: 3464 DGHYYSLILQG-LGNAVALDFD---------RVEKRLYWID-RENKVIERMFLNKTNRET 3512
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+I+ ++ L +D TR++Y+ D+ L + +G R++ L + V+ N L +
Sbjct: 3513 VINHRLPAAESLAVDWVTRKLYWLDTYLKCLSVSELNGQYRRK--LAEHCVDANNTLCFE 3570
Query: 422 NGVPALALDLENGMLYYS 439
N + L + G +Y++
Sbjct: 3571 NPR-GIVLHPQYGYVYWA 3587
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 12/134 (8%)
Query: 109 KAINHSAAFLIISNRHSILVADLEEKGKDHRAQD-------IVVSGLDLVEGLAYDWIGG 161
K +N+ + ++ I +D K RA IV + L GLA DW
Sbjct: 1071 KNVNNPRSIVVHPIAGYIFFSDWYRPAKILRAWSDGSNVVPIVNTTLGWPNGLAIDWGAL 1130
Query: 162 HIYWLDSRLNRIEVCDENGTNRIVLAK-DNITQPRGMMLDPSPGTRWLFWTDWGENPRIE 220
+YW+D+ ++IE +G+ R L + P G+ + +LF+TDW +
Sbjct: 1131 RLYWVDAFFDKIEHSTFDGSERRALGHIPQMAHPFGLTV----FQDYLFFTDWRLGAIVR 1186
Query: 221 RIGMDGSNRSTIIS 234
DG +R+ I S
Sbjct: 1187 VRKTDGGDRTVIRS 1200
>gi|351714999|gb|EHB17918.1| Low-density lipoprotein receptor-related protein 2 [Heterocephalus
glaber]
Length = 4674
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 119/301 (39%), Positives = 169/301 (56%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ +CDG +DCPNG DE P C+ C H G C++ C P GA C CPPG L+ND
Sbjct: 1301 CVNLSALCDGVSDCPNGTDESPLCNEDSCSHFNGGCTHQCIQGPFGATCICPPGYQLAND 1360
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
+ TC+D+NEC+ PG+CSQ+C N +GS+ C+C+ Y LE D TCK L++++++
Sbjct: 1361 TKTCEDINECDTPGFCSQLCYNLRGSFRCTCDSDYRLEDDGRTCKVTASENLLLLVASQN 1420
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+ ++ + G D R
Sbjct: 1421 KIIADNITSHVHNIVSLVQNGSHIIALDFDLVSGRIFWSDSSQGKTWSAFQNGTDRRV-- 1478
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ SG+ + E +A DWIG ++YW D L IEV +G++R+VL N+T PRG+ LDP
Sbjct: 1479 VHDSGVSMTETIAVDWIGRNLYWTDYALETIEVSKIDGSDRMVLISKNVTNPRGLALDPR 1538
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+FW+DWG +PRIER MDG+ R+ I+ KIYWP GLT+D R +YF D+ LD++
Sbjct: 1539 MNEHLMFWSDWGHHPRIERASMDGTLRTVIVQEKIYWPCGLTVDYPNRLIYFMDAYLDYL 1598
Query: 263 D 263
D
Sbjct: 1599 D 1599
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 176/343 (51%), Gaps = 59/343 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGL---CSNTCHPTPLGALCTCPPGEI 60
C+++ +VCDG +DCP G DE + C C CH TP G C CPPG +
Sbjct: 253 HCISIYQVCDGISDCPRGEDENSTASGSSCGTSLCSVLDCVFQCHKTPYGGSCFCPPGYV 312
Query: 61 LS-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI 119
++ NDS TC ++C+ G C Q C N G + C C EGYV+E + H + + + A +I
Sbjct: 313 INQNDSRTCVAFDDCQIWGICDQKCENRMGHHQCGCEEGYVMERERHCRASTSFNEASVI 372
Query: 120 ISNRHSILVADLEEKG--------------------KDHRA------------------- 140
SN +++ D++ + ++H+
Sbjct: 373 FSNGRDLVIGDIQGRSFEVLVHSQNRGMAMGVDFHYREHKVFWTDLMENKVFSIDMNSLK 432
Query: 141 -QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
Q+IV ++ E LA DW+ +Y +++R+NRI++ + +G++R+ L +N+ PRG+ +
Sbjct: 433 IQEIVNVSIETPENLAVDWVNNKLYIVETRVNRIDMVNLDGSHRVTLIAENLGHPRGVAV 492
Query: 200 DPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
DP+ G +LF++DW P++ER MDGSNR ++ TK+ WP G+TLD+ +R+Y+ D
Sbjct: 493 DPTVG--YLFFSDWESLSGEPKVERAFMDGSNRKDLVKTKLGWPAGITLDLLAKRIYWVD 550
Query: 257 SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKA 299
S+ D+I+ V Y + RK + GG+ +P A
Sbjct: 551 SRFDYIE--------TVTYDGLQRKT--VLHGGSLIPHPFAIA 583
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 123/369 (33%), Positives = 181/369 (49%), Gaps = 69/369 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ +TKVC+ DC + +DE GC + EC+ H C + C T C+C PG L
Sbjct: 3064 HCIEMTKVCNHLDDCSDNSDEK-GCGINECQDHSISGCDHNCTDTLTSFYCSCRPGYKLM 3122
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P C+Q C N GSYIC C GY+ E D TC+ + +LI S
Sbjct: 3123 SDKRTCVDIDECKETPYVCNQKCENEVGSYICKCAPGYIREPDGKTCRQNSDIEPYLIFS 3182
Query: 122 NR------------HSILVA--------------------DLEEK-------GKDHRAQD 142
NR +S+++ DLE + K +R +
Sbjct: 3183 NRYYLRNLTIDGSSYSLILQGLGNAVALDFDRVEKRLYWIDLERQVIERMFLNKTNR-ET 3241
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQP 194
I+ L E LA DW+ +YWLD++L+ I V + G R +LA+ + P
Sbjct: 3242 IINHRLPAPESLAVDWVARKLYWLDAQLDGIFVSNLQGQYRRMLAQHCMDANNTFCFDNP 3301
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
RG+++ P G ++W DWG++ I R+GMDG+N+S IISTK+ WPN +T+D +Y+
Sbjct: 3302 RGIVVHPQYGH--IYWADWGQHAYIGRVGMDGANKSVIISTKLSWPNAITIDYTNDLLYW 3359
Query: 255 ADSKLDFIDCKSLE----------IKTNVNYSTIFRK-LYWIDEGGNGVPLKIGKAN-MD 302
AD+ L +I+ LE I + T+F +YW D V K N D
Sbjct: 3360 ADAHLGYIEYSDLEGHHRHTVYDGILPHPYALTVFENTIYWTDWNTRTVE----KGNKYD 3415
Query: 303 GSNASILVS 311
GS+ +LV+
Sbjct: 3416 GSDRVVLVN 3424
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 138/326 (42%), Gaps = 102/326 (31%)
Query: 39 LCSNTCHPTPLGA-LCTCPPG-EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCN 96
LC C G +C+C G + ++D +CQD+NECE+ G C Q C NTKGSY C C
Sbjct: 3952 LCEQNCTQLSEGGFICSCRTGYKAGASDRNSCQDINECEEFGICPQNCRNTKGSYECFCA 4011
Query: 97 EGY--VLEYDNHTCKAINHSAAFLIISN-----------RHSILVADLE----------- 132
+G+ + + C A +S L+ N R S + D E
Sbjct: 4012 DGFRSMSTHYGERCAADGNSPLLLLPENVRIRKYNVSSERFSEYLEDEEHIQTIDFDWDP 4071
Query: 133 ------------------------------EKGKDHRAQDIVVSGLDLV---EGLAYDWI 159
E G ++ ++ + GL+ V +GLA DW+
Sbjct: 4072 EGTGLSVVYYTVLAQSPRFGAIKRAYIPNFESGSNNPTHEVDL-GLNYVMQPDGLAVDWV 4130
Query: 160 GGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG--------------- 204
G HIYW D++ RIEV +G R L + QP ++++P G
Sbjct: 4131 GRHIYWSDAKNQRIEVARLDGRYRKWLITTQMDQPAAIVVNPKLGHIYWSDAKNQRIEVA 4190
Query: 205 ------TRWL--------------------FWTDWGENPRIERIGMDGSNRSTIISTKIY 238
+WL FWTD G+ P+IE M+G +RS ++S +
Sbjct: 4191 RLDGRYRKWLITTTQNQPAAIVVNPKLGLVFWTDQGKEPKIESAWMNGEHRSILVSEDLG 4250
Query: 239 WPNGLTLD-IATRRVYFADSKLDFID 263
WPNGL++D + R+Y++DSK D I+
Sbjct: 4251 WPNGLSIDYLNNDRIYWSDSKEDVIE 4276
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 180/464 (38%), Gaps = 83/464 (17%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI- 60
A +C+ + VCDG DC + DE C C C+N LC
Sbjct: 2940 ARKCIPRSWVCDGDADCIDALDEHQNCTRRSCSADEFTCNN--------GLCVLQSFRCD 2991
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN----------HTCKA 110
ND D EC P T G I N+ +V ++DN H C A
Sbjct: 2992 WRNDCGDYSDERECSYPACQENQFTCQNGRCI---NKAFVCDHDNDCGDESDEQEHLCHA 3048
Query: 111 IN-------------HSAAFLIISNRHSILVADLEEKGKD-HRAQDIVVSGL-----DLV 151
+ H + N + +EKG + QD +SG D +
Sbjct: 3049 LQPTCPPHQFKCDNGHCIEMTKVCNHLDDCSDNSDEKGCGINECQDHSISGCDHNCTDTL 3108
Query: 152 EGLAYDWIGGHIYWLDSRL--------NRIEVCDENGTNRI-----VLAKDNITQPRGMM 198
G+ D R VC++ N + A I +P G
Sbjct: 3109 TSFYCSCRPGYKLMSDKRTCVDIDECKETPYVCNQKCENEVGSYICKCAPGYIREPDGKT 3168
Query: 199 LDPSPGTR-WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+ +L +++ + + +DGS+ S I+ + L D +R+Y+ D
Sbjct: 3169 CRQNSDIEPYLIFSN---RYYLRNLTIDGSSYSLILQ-GLGNAVALDFDRVEKRLYWIDL 3224
Query: 258 KLDFIDCKSLEIKTN----VNYST----------IFRKLYWIDEGGNGVPLKIGKANMDG 303
+ I+ + KTN +N+ + RKLYW+D +G+ + +N+ G
Sbjct: 3225 ERQVIE-RMFLNKTNRETIINHRLPAPESLAVDWVARKLYWLDAQLDGIFV----SNLQG 3279
Query: 304 SNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
+L + D G++ + ++W DWG++ I R+GMDG+N+S
Sbjct: 3280 QYRRMLAQHCMDANNTFCFDNPRGIVVHPQYG---HIYWADWGQHAYIGRVGMDGANKSV 3336
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
IISTK+ WPN +T+D +Y+AD+ L +I++ + +G R V
Sbjct: 3337 IISTKLSWPNAITIDYTNDLLYWADAHLGYIEYSDLEGHHRHTV 3380
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 74/125 (59%), Gaps = 6/125 (4%)
Query: 142 DIVVSGL--DLVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGM 197
+IV SG+ + + G+A DW+ G++Y+ + IEV N T R VL K + PR +
Sbjct: 2112 NIVTSGIGRNGIRGIAVDWVAGNLYFTNGFATETLIEVLRINTTYRRVLLKTTVDMPRHI 2171
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++DP R+LFW D+G+ P+IER +D +NR+ ++S I P GL +D + +Y+ D
Sbjct: 2172 VVDPK--NRYLFWADYGQKPKIERSFLDCTNRTVLVSDGIVTPRGLAVDHSNDYIYWVDD 2229
Query: 258 KLDFI 262
LD I
Sbjct: 2230 SLDII 2234
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 105/231 (45%), Gaps = 50/231 (21%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++VS + +G+A+DWI IY+ D I E+G+ R V+A ++++P+ ++LDP
Sbjct: 2436 VIVSDIGTSDGIAFDWINRRIYYSDYVNGTINSVAEDGSMRSVVA--HVSKPKSVVLDPC 2493
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W++W +IE+ + G+ R I++T + WP+ LTLD +Y+ D+ L
Sbjct: 2494 HG--YMYWSNWNTTAQIEKATLGGNFRIPIVNTSLVWPSALTLDYELNLLYWVDTSLQ-- 2549
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
KI ++ + G N +++S ++ + L L
Sbjct: 2550 --------------------------------KIERSTLTGMNREVIIS-SIFHSFGLTL 2576
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
++++WTD+ DGS + + +T P G+
Sbjct: 2577 YG-----------QYIYWTDFFAKKIYRASKYDGSGQMAVTTTLPVRPKGI 2616
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 111/229 (48%), Gaps = 24/229 (10%)
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
F ++R I ++ G+ + + + ++ VE LA+DWI ++YW D+ + V
Sbjct: 731 FFSDTSRDMIYKQKIDGTGR----EILTANRVENVESLAFDWISKNLYWTDASFKTVSVM 786
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 236
+R + + N+ PR +++ P G ++F++DW +I R DGS+ I++T
Sbjct: 787 RLADKSRRAIVQ-NLNNPRAVVVHPIGG--YIFFSDWFRPAKIMRAWADGSHLVPIVNTT 843
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKS-----------LEIKTNVNYSTIFRKLYWI 285
+ WPNGL +D R+Y+ D+ D I+ + +E T+ T+F++ +
Sbjct: 844 LGWPNGLAIDWDASRLYWVDALFDKIEHSTFDGLDRRRLDHIEQMTHPFGLTVFKEHVYF 903
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSG----QLYEALALDLENGMLYYS 330
+ +++ K +DG + ++ SG +A +DL+ G Y S
Sbjct: 904 TDWRLDAIVQVRK--LDGGDMRVIRSGISRIMHVKAYDVDLQTGTNYCS 950
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 27/185 (14%)
Query: 242 GLTLDIATRRVYFADSKLDFI-----DCKSLEIKT--------NVNYSTIFRKLYWIDEG 288
G+ D ++F+D+ D I D EI T ++ + I + LYW D
Sbjct: 720 GIDFDAHENTIFFSDTSRDMIYKQKIDGTGREILTANRVENVESLAFDWISKNLYWTDAS 779
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
V + D S +I+ + A+ + G ++F++DW +
Sbjct: 780 FKTVSVM---RLADKSRRAIVQNLNNPRAVVVHPIGG-----------YIFFSDWFRPAK 825
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I R DGS+ I++T + WPNGL +D R+Y+ D+ D I+ +DG R+++ I
Sbjct: 826 IMRAWADGSHLVPIVNTTLGWPNGLAIDWDASRLYWVDALFDKIEHSTFDGLDRRRLDHI 885
Query: 409 DLMVE 413
+ M
Sbjct: 886 EQMTH 890
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 129/334 (38%), Gaps = 98/334 (29%)
Query: 80 CSQMCTNTKG-SYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH 138
C Q+C G + C+C G+ L D TC +F+++S +I LE DH
Sbjct: 2005 CQQICLPVPGGQFSCACATGFKLNPDYRTCSPYK---SFIVVSMLSAIRGFSLEVS--DH 2059
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
+ V G G N +
Sbjct: 2060 SEAMVPVGG-------------------------------QGRN-------------ALH 2075
Query: 199 LDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRSTIISTKI--YWPNGLTLDIATRRV 252
+D + +++W D+ + I RI DGS+ + I+++ I G+ +D +
Sbjct: 2076 VDVDVASGFIYWCDFSSSVDSYNAIRRIRPDGSSFTNIVTSGIGRNGIRGIAVDWVAGNL 2135
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
YF + F +E+ + +T +R++ + K +D
Sbjct: 2136 YFTNG---FATETLIEV---LRINTTYRRV-------------LLKTTVD---------- 2166
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
+ + +D +N R+LFW D+G+ P+IER +D +NR+ ++S I P G
Sbjct: 2167 -MPRHIVVDPKN-----------RYLFWADYGQKPKIERSFLDCTNRTVLVSDGIVTPRG 2214
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
L +D + +Y+ D LD I + +G G +V+
Sbjct: 2215 LAVDHSNDYIYWVDDSLDIIARIHLNG-GESEVV 2247
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 78/195 (40%), Gaps = 46/195 (23%)
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
G++ T+I + I +G+ D RR+Y++D
Sbjct: 2430 GTHSPTVIVSDIGTSDGIAFDWINRRIYYSDY---------------------------- 2461
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
V I DGS S++ +++ LD C +++W++W
Sbjct: 2462 ------VNGTINSVAEDGSMRSVVAHVSKPKSVVLD-----------PCHGYMYWSNWNT 2504
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+IE+ + G+ R I++T + WP+ LTLD +Y+ D+ L I+ G R +V
Sbjct: 2505 TAQIEKATLGGNFRIPIVNTSLVWPSALTLDYELNLLYWVDTSLQKIERSTLTGMNR-EV 2563
Query: 406 ILIDLMVEFTNDLMG 420
I+ + F L G
Sbjct: 2564 IISSIFHSFGLTLYG 2578
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 148/408 (36%), Gaps = 113/408 (27%)
Query: 46 PTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCT-NTKGS--YICSCNEGYVLE 102
P PLG + P + Q N C CS +C +T+G Y C+C G+ L
Sbjct: 1660 PRPLGIVAVHPAKQP--------QSPNPCGS-APCSHLCLLSTQGPKYYSCACPSGWNLS 1710
Query: 103 YDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGH 162
+D+ C + FL+ H I L+ + K + A + ++G+ + +D
Sbjct: 1711 HDSVNC--MRGDQPFLMSVRMHVIFGISLDPEVKSNDAM-VPIAGIQNGFDVEFDDAEQF 1767
Query: 163 IYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP-RIER 221
IY W ENP I R
Sbjct: 1768 IY------------------------------------------------WVENPGEIHR 1779
Query: 222 IGMDGSNRSTIISTKIYWPN-GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFR 280
+ DG+NR+ + + GL D +R +Y+ I+ +L +T +R
Sbjct: 1780 VKTDGTNRTVFAPLSLLGSSVGLAFDWISRNMYYITPASHSIEVLTLRGETR------YR 1833
Query: 281 KLYWIDEGGN-GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLF 339
K ++G + GV +G +A+D G LY+S
Sbjct: 1834 KTLITNDGTDLGVGFPVG--------------------IAVDPARGKLYWSDQG------ 1867
Query: 340 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
TD G +I MDG++ + + + +TLDI +++Y+A + I+ N DG
Sbjct: 1868 -TDSGVPAKIASANMDGTSSKILFTGNLDHLEVVTLDIKEQKLYWAVTSRGVIERGNVDG 1926
Query: 400 TGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
T R +IL+ + + + + LYYS E E ++
Sbjct: 1927 TER--MILVHHLSH------------PWGVAVHDSFLYYSDEQYEVIE 1960
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 120/525 (22%), Positives = 193/525 (36%), Gaps = 146/525 (27%)
Query: 5 CVNLTKVCDGKTD-----------CPNGADEGPG---CDLAECKHKFGLCSNT------- 43
CV +CDG D C + A E P CD + C + LC+
Sbjct: 3832 CVQSYFICDGDDDCGDGSDEELHLCFSVACEPPHRFRCDNSRCLYSHQLCNGVDDCGDGT 3891
Query: 44 ------CH-PTPLGALCT-----CPPGEILS--------------NDSVTC---QDMNEC 74
C PTP CT C G +S +D C +D
Sbjct: 3892 DEKEEHCRKPTP--KPCTENEFKCSSGNCISQHYICDDIDDCGDLSDETGCNIGKDRTCA 3949
Query: 75 EQPGYCSQMCTN-TKGSYICSCNEGYVL-EYDNHTCKAINHSAAFLIISNR-------HS 125
E C Q CT ++G +ICSC GY D ++C+ IN F I +
Sbjct: 3950 EN--LCEQNCTQLSEGGFICSCRTGYKAGASDRNSCQDINECEEFGICPQNCRNTKGSYE 4007
Query: 126 ILVADLEEKGKDHRAQDIVVSG-----------------------------LDLVEGLAY 156
AD H + G + ++ + +
Sbjct: 4008 CFCADGFRSMSTHYGERCAADGNSPLLLLPENVRIRKYNVSSERFSEYLEDEEHIQTIDF 4067
Query: 157 DW----IGGHIYWLD-------------SRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
DW G + + + + E N T+ + L + + QP G+ +
Sbjct: 4068 DWDPEGTGLSVVYYTVLAQSPRFGAIKRAYIPNFESGSNNPTHEVDLGLNYVMQPDGLAV 4127
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
D R ++W+D +N RIE +DG R +I+T++ P + ++ +Y++D+K
Sbjct: 4128 DWV--GRHIYWSD-AKNQRIEVARLDGRYRKWLITTQMDQPAAIVVNPKLGHIYWSDAKN 4184
Query: 260 DFIDCKSLE-------IKTNVNYST---IFRKL---YWIDEGGNGVPLKIGKANMDGSNA 306
I+ L+ I T N + KL +W D+G KI A M+G +
Sbjct: 4185 QRIEVARLDGRYRKWLITTTQNQPAAIVVNPKLGLVFWTDQGKEP---KIESAWMNGEHR 4241
Query: 307 SILVSGQL--YEALALD-LENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
SILVS L L++D L N +Y W+D E+ IE I DG++R I+
Sbjct: 4242 SILVSEDLGWPNGLSIDYLNNDRIY-----------WSDSKED-VIETIRYDGTDRRVIV 4289
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
+ +LDI ++Y+ + + N G G ++ +L+
Sbjct: 4290 KEAM---KPYSLDIFEDQLYWVSKEKGEVWKQNKFGQGVKEKMLV 4331
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ + L + D+ +YW D+ L IE D G +R + + P + + +
Sbjct: 3337 IISTKLSWPNAITIDYTNDLLYWADAHLGYIEYSDLEGHHRHTVYDGILPHPYALTVFEN 3396
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIIST 235
++WTDW + DGS+R +++T
Sbjct: 3397 T----IYWTDWNTRTVEKGNKYDGSDRVVLVNT 3425
>gi|149022162|gb|EDL79056.1| rCG26871, isoform CRA_a [Rattus norvegicus]
Length = 4660
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 167/301 (55%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+NL+ +CDG DCPNG DE P C+ C H G C++ C P GA C CP G L+ND
Sbjct: 1326 CINLSALCDGVFDCPNGTDESPLCNQDSCSHFNGGCTHQCMQGPFGATCLCPLGYQLAND 1385
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
+ TC+D+NEC+ PG+CSQ C N +GS+ C+C+ Y LE D TCK L++++R
Sbjct: 1386 TKTCEDINECDIPGFCSQHCVNMRGSFRCACDPEYTLESDGRTCKVTGSENPLLVVASRD 1445
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+V ++ + G D R
Sbjct: 1446 KIIVDNITAHTHNLYSLVQDVSFVVALDFDSVTGRVFWSDLLQGKTWSVFQNGTDKRV-- 1503
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ SGL + E +A DWIG ++YW D L IEV +G++R VL N+T+PRG+ LDP
Sbjct: 1504 VHDSGLSVTEMIAVDWIGRNLYWTDYALETIEVSKIDGSHRTVLISKNVTKPRGLALDPR 1563
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +FW+DWG +PRIER MDG+ R+ I+ KIYWP GL++D R +YF D+ LD+I
Sbjct: 1564 MGDNVMFWSDWGHHPRIERASMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYI 1623
Query: 263 D 263
+
Sbjct: 1624 E 1624
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/343 (36%), Positives = 178/343 (51%), Gaps = 63/343 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
RC+++ KVCDG DCP G DE G C + C C CH TP G C CPPG
Sbjct: 277 RCISIDKVCDGVPDCPEGDDENNVTSGRTCGMGVCS--VLNCEYQCHQTPFGGECFCPPG 334
Query: 59 EIL-SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I+ SNDS TC D ++C+ G C Q C N +G + C C EGY+LE H + + SAA
Sbjct: 335 HIINSNDSRTCIDFDDCQIWGICDQKCENRQGRHQCLCEEGYILERGQHCKSSDSFSAAS 394
Query: 118 LIISNRHSILVADLEEKG--------------------KDHRA----------------- 140
+I SN +LV DL + + HR
Sbjct: 395 VIFSNGRDLLVGDLHGRNFRILAESKNRGMVMGVDFHYQKHRVFWTDPMQEKVFSTDING 454
Query: 141 ---QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
Q+I+ +D E LA DWI +Y +++++NRI+V + G R+ L +N+ PRG+
Sbjct: 455 LNTQEILNVSVDTPENLAVDWINNKLYLVETKVNRIDVVNLEGNQRVTLITENLGHPRGI 514
Query: 198 MLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
LDP+ G +LF++DWG P++ER MDGSNR +++TK+ WP G+TLD+ ++RVY+
Sbjct: 515 ALDPTVG--YLFFSDWGSLSGQPKVERAFMDGSNRKDLVTTKVGWPAGITLDLVSKRVYW 572
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
DS+ D+I+ V Y I RK + GG+ VP G
Sbjct: 573 VDSRYDYIE--------TVTYDGIQRKT--VARGGSLVPHPFG 605
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 183/411 (44%), Gaps = 98/411 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + +VC+ DC + +DE GC + EC C + C T C+C PG L
Sbjct: 3088 HCIEMGRVCNHVDDCSDNSDEK-GCGINECLDSSISRCDHNCTDTITSFYCSCLPGYKLM 3146
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D +C D++EC E P CSQ C N GSYIC C GY+ E D +C+ ++ +LI S
Sbjct: 3147 SDKRSCVDIDECKESPQLCSQKCENVVGSYICKCAPGYIREPDGKSCRQNSNIEPYLIFS 3206
Query: 122 NRHSI-------------------LVA-------------DLEEK-------GKDHRAQD 142
NR+ I +VA D E++ K +R +
Sbjct: 3207 NRYYIRNLTTDGSSYSLILQGLGNVVALDFDRVEKRLYWIDAEKQIIERMFLNKTNR-ET 3265
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQP 194
I+ L E LA DW+ +YWLD+ L+ + V D G +R ++A+ + P
Sbjct: 3266 IINHRLRRAESLAVDWVSRKLYWLDAILDCLFVSDLEGRHRKMIAQHCVDANNTFCFEHP 3325
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
RG++L P G ++W DWG + I RIGMDG+N+S IISTKI WPN +T+D +Y+
Sbjct: 3326 RGIVLHPQRGH--VYWADWGVHAYIGRIGMDGTNKSVIISTKIEWPNAITIDYTNDLLYW 3383
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
AD+ L +I+ LE G + + G L
Sbjct: 3384 ADAHLGYIEFSDLE----------------------------------GHHRHTVYDGSL 3409
Query: 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
AL ++ T +FWTDW + DGS R +++T
Sbjct: 3410 PHPFAL-----TIFEDT------VFWTDWNTRTVEKGNKYDGSGRVVLVNT 3449
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 100/186 (53%), Gaps = 13/186 (6%)
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
++ +++W + L T V+ + + L + + I R LYW D +
Sbjct: 1477 VTGRVFWSD--LLQGKTWSVFQNGTDKRVVHDSGLSVTEMIAVDWIGRNLYWTDYALETI 1534
Query: 293 PLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+ + +DGS+ ++L+S + + L L+ M +FW+DWG +PRIER
Sbjct: 1535 EV----SKIDGSHRTVLISKNVTKPRGLALDPRMG-------DNVMFWSDWGHHPRIERA 1583
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
MDG+ R+ I+ KIYWP GL++D R +YF D+ LD+I+FC+YDG R+QVI DL++
Sbjct: 1584 SMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYIEFCDYDGHNRRQVIASDLVL 1643
Query: 413 EFTNDL 418
+ L
Sbjct: 1644 HHPHAL 1649
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 122/255 (47%), Gaps = 50/255 (19%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+++S + + +G+A+DWI IY+ D I E+G+NR V+A+ +++PR ++LDP
Sbjct: 2461 VLLSNIGVTDGIAFDWINRRIYYSDFSNQTINSMAEDGSNRAVIAR--VSKPRAIVLDPC 2518
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWG N +IER + G+ R I++T + WPNGL LD+ T +Y+AD+ L
Sbjct: 2519 RG--YMYWTDWGTNAKIERATLGGNFRVPIVNTSLVWPNGLALDLETDLLYWADASLQ-- 2574
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
KI ++ + G+N ++VS +
Sbjct: 2575 --------------------------------KIERSTLTGTNREVVVSTAFHSF----- 2597
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G+ Y ++++WTD DGS+ + + P+G++ + T+R
Sbjct: 2598 --GLTVYG-----QYIYWTDLYTRKIYRANKYDGSDLVAMTTRLPTQPSGISTVVKTQRQ 2650
Query: 383 YFADSKLDFIDFCNY 397
++ F C++
Sbjct: 2651 QCSNPCDQFNGGCSH 2665
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 97/177 (54%), Gaps = 15/177 (8%)
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
R D+ + L +GLA DW+G HIYW D++ RIEV +G R L + QP +
Sbjct: 4134 REVDLGLKYLMQPDGLAVDWVGRHIYWSDAKSQRIEVATLDGRYRKWLITTQLDQPAAIA 4193
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADS 257
++P G +FWTD G+ P+IE M+G +RS ++S + WPNGL++D + RVY++DS
Sbjct: 4194 VNPKLGL--MFWTDQGKQPKIESAWMNGEHRSVLVSENLGWPNGLSIDYLNDDRVYWSDS 4251
Query: 258 KLDFIDC-------KSLEIKTNVNYST--IFR-KLYWI--DEGGNGVPLKIGKANMD 302
K D I+ + L I + + IF KLYW+ ++G K GK N +
Sbjct: 4252 KEDVIEAIKYDGTDRRLIINEAMKPFSLDIFEDKLYWVAKEKGEVWRQNKFGKENKE 4308
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 57/238 (23%)
Query: 77 PGYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NR 123
P C Q+C G + C+C G+ L D +C N +F+++S +
Sbjct: 2027 PNACQQICLPVPGGMFSCACASGFKLSPDGRSCSPYN---SFMVVSMLPAVRGFSLELSD 2083
Query: 124 HSILVADLEEKGKDHRAQDIVVS------------------------------------- 146
HS + + +G++ D+ V+
Sbjct: 2084 HSEAMVPVAGQGRNVLHADVDVANGFIYWCDFSSSVRSSNGIRRIKPDGSNFTNVVTYGI 2143
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
G + + G+A DW G++Y+ ++ + IEV N T R VL K ++ PR +++DP
Sbjct: 2144 GANGIRGVALDWAAGNLYFTNAFVYETLIEVLRINTTYRRVLLKVSVDMPRHIIVDPK-- 2201
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
R+LFW D+G+ P+IER +D +NR+ ++S I P GL +D T +Y+ D LD I
Sbjct: 2202 HRYLFWADYGQKPKIERSFLDCTNRTVLVSEGIVTPRGLAMDHDTGYIYWVDDSLDLI 2259
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 140/314 (44%), Gaps = 67/314 (21%)
Query: 78 GYCSQMCT------NTKGSYICSCNEGYVLEYDNHTCKAINH------------------ 113
G C+Q+C N Y C C G+ L+ D H C A+ +
Sbjct: 667 GGCAQVCVLSHRTDNGGLGYRCKCEFGFELDDDEHRCVAVKNFLLFSSKTAVRGIPFTLS 726
Query: 114 -----------SAAFLI---ISNRHS-ILVADLEE-----KGKDHRAQDIVVSG-LDLVE 152
S +F + +HS + +DL + + D ++++ + L+ VE
Sbjct: 727 TQEDVMVPVTGSPSFFVGIDFDAQHSTVFYSDLSKDIIYKQKIDGTGKEVITANRLESVE 786
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
L +DWI ++YW D L + V + + R +++ N+ PR +++ P+ G ++F +
Sbjct: 787 CLTFDWISRNLYWTDGGLKSVTVLRLADKSRRQIIS--NLNNPRSIVVHPTAG--YMFLS 842
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKLDFID 263
DW +I R DGS+ I++T + WPNGL +D + R+Y+ D S LD +D
Sbjct: 843 DWFRPAKIMRAWSDGSHLMPIVNTSLGWPNGLAIDWSASRLYWVDAFFDKIEHSTLDGLD 902
Query: 264 CKSLEIKTNVNYS---TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG----QLYE 316
K L + + T+F+ +I + G +++ K+ DG + +++ G +
Sbjct: 903 RKRLGHVDQMTHPFGLTVFKDNVFITDWRLGAIIRVRKS--DGGDMTVIRRGISSVMHVK 960
Query: 317 ALALDLENGMLYYS 330
A DL+ G Y S
Sbjct: 961 AYDADLQTGSNYCS 974
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 83/147 (56%), Gaps = 19/147 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ R +YW D +I A +DG L++ QL + A+A++ + G++
Sbjct: 4154 VGRHIYWSDAKSQ----RIEVATLDGRYRKWLITTQLDQPAAIAVNPKLGLM-------- 4201
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDF 394
FWTD G+ P+IE M+G +RS ++S + WPNGL++D + RVY++DSK D I+
Sbjct: 4202 ---FWTDQGKQPKIESAWMNGEHRSVLVSENLGWPNGLSIDYLNDDRVYWSDSKEDVIEA 4258
Query: 395 CNYDGTGRQQVILIDLMVEFTNDLMGD 421
YDGT R ++I+ + M F+ D+ D
Sbjct: 4259 IKYDGTDR-RLIINEAMKPFSLDIFED 4284
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 15/142 (10%)
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
++ + + + I R++Y+ D I DGSN +++ A+ LD
Sbjct: 2464 SNIGVTDGIAFDWINRRIYYSDFSNQ----TINSMAEDGSNRAVIARVSKPRAIVLD--- 2516
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384
C +++WTDWG N +IER + G+ R I++T + WPNGL LD+ T +Y+
Sbjct: 2517 --------PCRGYMYWTDWGTNAKIERATLGGNFRVPIVNTSLVWPNGLALDLETDLLYW 2568
Query: 385 ADSKLDFIDFCNYDGTGRQQVI 406
AD+ L I+ GT R+ V+
Sbjct: 2569 ADASLQKIERSTLTGTNREVVV 2590
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 29/186 (15%)
Query: 242 GLTLDIATRRVYFADSKLDFI-------------DCKSLEIKTNVNYSTIFRKLYWIDEG 288
G+ D V+++D D I LE + + I R LYW D G
Sbjct: 744 GIDFDAQHSTVFYSDLSKDIIYKQKIDGTGKEVITANRLESVECLTFDWISRNLYWTDGG 803
Query: 289 GNGVP-LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
V L++ D S I+ + ++ + G ++F +DW
Sbjct: 804 LKSVTVLRLA----DKSRRQIISNLNNPRSIVVHPTAG-----------YMFLSDWFRPA 848
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+I R DGS+ I++T + WPNGL +D + R+Y+ D+ D I+ DG R+++
Sbjct: 849 KIMRAWSDGSHLMPIVNTSLGWPNGLAIDWSASRLYWVDAFFDKIEHSTLDGLDRKRLGH 908
Query: 408 IDLMVE 413
+D M
Sbjct: 909 VDQMTH 914
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 25/182 (13%)
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
D KS +N+ IF Y+I DGS+ S+++ G L +ALD
Sbjct: 3189 DGKSCRQNSNIEPYLIFSNRYYIR-----------NLTTDGSSYSLILQG-LGNVVALDF 3236
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+ + + L+W D E IER+ ++ +NR TII+ ++ L +D +R++
Sbjct: 3237 D---------RVEKRLYWID-AEKQIIERMFLNKTNRETIINHRLRRAESLAVDWVSRKL 3286
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
Y+ D+ LD + D GR + ++ V+ N ++ + L + G +Y++ G
Sbjct: 3287 YWLDAILDCLFV--SDLEGRHRKMIAQHCVDANNTFCFEHPR-GIVLHPQRGHVYWADWG 3343
Query: 443 AE 444
Sbjct: 3344 VH 3345
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 94/237 (39%), Gaps = 48/237 (20%)
Query: 213 WGENP-RIERIGMDGSNRSTII-STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DGSNR+ + + GL LD +R +Y+ I+ +L+
Sbjct: 1795 WVENPGEIHRVKTDGSNRTVFAPLSLLGSSLGLALDWVSRNIYYTTPASRSIEVLTLKGD 1854
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
T + I +G PL +G +A+D G LY+S
Sbjct: 1855 TRYGKTLI---------ANDGTPLGVG----------------FPVGIAVDPARGKLYWS 1889
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 390
TD G +I MDG++ + + + +TLDI +++Y+A +
Sbjct: 1890 D-------HGTDSGVPAKIASANMDGTSLKILFTGNLQHLEVVTLDIQEQKLYWAVTSRG 1942
Query: 391 FIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I+ N DGT R +IL+ + L + LYYS E E ++
Sbjct: 1943 VIERGNVDGTER--MILVHHLAH------------PWGLVVYGSFLYYSDEQYEVIE 1985
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 129/315 (40%), Gaps = 46/315 (14%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNI-TQPRGMMLDPSPGTRWLFW 210
GL+ D+ IY++D+ L+ IE CD +G N R V+A D + P + L +++W
Sbjct: 1603 GLSIDYPNRLIYFMDAYLDYIEFCDYDGHNRRQVIASDLVLHHPHALTL----FEDFVYW 1658
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
TD G ++ G N+S ++ + ++ P G+T +R+ + C S
Sbjct: 1659 TDRGTRQVMQANKWHGGNQSVVMYS-VHQPLGITAIHPSRQPPSRNP------CASASCS 1711
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS--GQLYEALALDLE----N 324
S + Y +G L N + L+S + ++LD E +
Sbjct: 1712 HLCLLSAQAPRHYSC-ACPSGWNLSDDSVNCVRGDQPFLMSVRDNIIFGISLDPEVKSND 1770
Query: 325 GMLYYSTLKCTRWLFWTD------WGENP-RIERIGMDGSNRSTII-STKIYWPNGLTLD 376
M+ S ++ + + D W ENP I R+ DGSNR+ + + GL LD
Sbjct: 1771 AMVPISGIQHGYDVEFDDSEQFIYWVENPGEIHRVKTDGSNRTVFAPLSLLGSSLGLALD 1830
Query: 377 IATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVP-------ALAL 429
+R +Y+ I+ G R + L+ ++G P +A+
Sbjct: 1831 WVSRNIYYTTPASRSIEVLTLKGDTR-----------YGKTLIANDGTPLGVGFPVGIAV 1879
Query: 430 DLENGMLYYSTEGAE 444
D G LY+S G +
Sbjct: 1880 DPARGKLYWSDHGTD 1894
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 147/412 (35%), Gaps = 113/412 (27%)
Query: 28 CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCS------ 81
C A C H L + P C CP G LS+DSV C +QP S
Sbjct: 1705 CASASCSHLCLLSAQA----PRHYSCACPSGWNLSDDSVNCVRG---DQPFLMSVRDNII 1757
Query: 82 -------QMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK 134
++ +N I GY +E+D+ S F+ +E
Sbjct: 1758 FGISLDPEVKSNDAMVPISGIQHGYDVEFDD--------SEQFIYW----------VENP 1799
Query: 135 GKDHRAQD--------IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--- 183
G+ HR + +S L GLA DW+ +IY+ IEV G R
Sbjct: 1800 GEIHRVKTDGSNRTVFAPLSLLGSSLGLALDWVSRNIYYTTPASRSIEVLTLKGDTRYGK 1859
Query: 184 IVLAKD----NITQPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRSTIIST 235
++A D + P G+ +DP+ G L+W+D G + +I MDG++ + +
Sbjct: 1860 TLIANDGTPLGVGFPVGIAVDPARGK--LYWSDHGTDSGVPAKIASANMDGTSLKILFTG 1917
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
+ +TLDI +++Y+A + I+
Sbjct: 1918 NLQHLEVVTLDIQEQKLYWAVTSRGVIE-------------------------------- 1945
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
+ N+DG+ ILV L L + LYYS + IER+
Sbjct: 1946 --RGNVDGTERMILVH-HLAHPWGLVVYGSFLYYSD------------EQYEVIERVDKS 1990
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
N ++ + + GL RVY + D + C+ + QQ+ L
Sbjct: 1991 SGNNKVVLRDNVPYLRGL-------RVYHRRNAADSSNGCSNNPNACQQICL 2035
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 107/496 (21%), Positives = 174/496 (35%), Gaps = 102/496 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSN-TCHPTPLGA--LCTCPPGEIL 61
C+ + VCD DC +GADE C C + CSN C P+ + CP G
Sbjct: 80 CIPSSWVCDEDKDCSDGADEQQNCAGTTCSAQQMTCSNGQCIPSEYRCDHVSDCPDGSDE 139
Query: 62 SN------DSVTCQD------MNECEQPGYCSQMCTNTKGSYICSCNE-----------G 98
N D +TC + C+Q C + +CS E
Sbjct: 140 RNCHYPTCDQLTCANGACYNTSQRCDQKVDCRDSSDEANCTTLCSQKEFECGSGECILRA 199
Query: 99 YVLEYDN--------HTCKAINHSAAFLIISNRHSI---LVADLEEKGKDHRAQDIVVSG 147
YV ++DN C SN I V D ++ +D +D S
Sbjct: 200 YVCDHDNDCEDNSDERNCNYDTCGGHQFTCSNGQCINQNWVCDGDDDCQDSGDEDGCESN 259
Query: 148 LDLVEGLAYDWI---GGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR--GMMLDPS 202
+W G +D + + C E ++N+T R GM +
Sbjct: 260 QSHHRCYPREWACPGSGRCISIDKVCDGVPDCPEGDD------ENNVTSGRTCGMGV--- 310
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ + T + + P G ++ R + +DF
Sbjct: 311 ----------------CSVLNCEYQCHQTPFGGECFCPPGHIINSNDSR-----TCIDFD 349
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS----------- 311
DC+ I + R +EG + K++ S AS++ S
Sbjct: 350 DCQIWGICDQKCENRQGRHQCLCEEGYILERGQHCKSSDSFSAASVIFSNGRDLLVGDLH 409
Query: 312 GQLYEALALDLENGMLYYSTLKCTRW-LFWTDWGENPRIERI---GMDGSNRSTIISTKI 367
G+ + LA GM+ + +FWTD P E++ ++G N I++ +
Sbjct: 410 GRNFRILAESKNRGMVMGVDFHYQKHRVFWTD----PMQEKVFSTDINGLNTQEILNVSV 465
Query: 368 YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPAL 427
P L +D ++Y ++K++ ID N +G Q+V LI T +L G+
Sbjct: 466 DTPENLAVDWINNKLYLVETKVNRIDVVNLEGN--QRVTLI------TENLGHPRGI--- 514
Query: 428 ALDLENGMLYYSTEGA 443
ALD G L++S G+
Sbjct: 515 ALDPTVGYLFFSDWGS 530
>gi|296204605|ref|XP_002749340.1| PREDICTED: low-density lipoprotein receptor-related protein 2
[Callithrix jacchus]
Length = 4656
Score = 240 bits (613), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 125/301 (41%), Positives = 167/301 (55%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCDG DCPNG DE P C+ C G C++ C P GA C CP G +L+ND
Sbjct: 1325 CVNLSVVCDGTFDCPNGTDESPLCNQNSCSDFNGGCTHECVQEPFGAKCLCPSGFVLAND 1384
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++EC+ PG CSQ C N +GS+ CSC+ GY+LE D TCKA + L++++++
Sbjct: 1385 SKTCEDVDECDIPGSCSQQCYNMRGSFRCSCDTGYLLESDGRTCKAAASESLLLLVASQN 1444
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+ ++ + G D R
Sbjct: 1445 RIIADNVTSQVHNMYSLVENGSYIVAIDFDSISGRIFWSDATQGKTWSAFQNGTDRRV-- 1502
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ S + L E +A DW+G +IYW D L IEV +G++R VL N+T PRG+ LDP
Sbjct: 1503 VFDSSIVLTETIAVDWVGRNIYWTDYALETIEVSKIDGSHRTVLISKNLTNPRGLALDPR 1562
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
LFW+DWG +PRIER MDGS RS I+ KI+WP GLT+D R +YF DS LD+I
Sbjct: 1563 MNEHLLFWSDWGHHPRIERASMDGSMRSVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYI 1622
Query: 263 D 263
D
Sbjct: 1623 D 1623
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 124/386 (32%), Positives = 194/386 (50%), Gaps = 80/386 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
RC+++ KVCDG DCP DE G C C C CH TP G +C CPPG
Sbjct: 278 RCISIYKVCDGVLDCPGREDENSTTTGKYCGTTLCSALN--CQYQCHETPYGGVCFCPPG 335
Query: 59 EILS-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA-A 116
I++ NDS TC + ++C+ G C Q C + G ++C C EGY+LE+ H CKA + S A
Sbjct: 336 YIINHNDSRTCVEFDDCQIWGICDQRCESRPGYHLCHCEEGYILEHGQH-CKANDSSGEA 394
Query: 117 FLIISNRHSILVADLEEKG----------------------------------------K 136
F+I SN +L+ D+ +
Sbjct: 395 FVIFSNGRDLLIGDIHGRNFRILVESQNRGVAVGVAFHYHLQRVFWTDTVQNKVFSVHIN 454
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
D Q+++ ++ E LA DW+ +Y +++++NRI++ + +G+ R+ L +N+ PRG
Sbjct: 455 DLSIQEVLNISVETPENLAVDWVNNKLYLVETKVNRIDMVNLDGSYRVTLITENLGHPRG 514
Query: 197 MMLDPSPGTRWLFWTDW----GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
+ +DP+ G +LF++DW GE P++ER MDGSNR ++ TK+ WP G+TLD+ ++RV
Sbjct: 515 IAVDPTVG--YLFFSDWESLSGE-PKLERAFMDGSNRKDLVRTKLGWPAGITLDLISKRV 571
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG-------SN 305
Y+ DS+ D+I+ V Y I RK + GG+ +P G +G +
Sbjct: 572 YWVDSRFDYIE--------TVTYDGIQRKT--VVHGGSLIPHPFGITLFEGQVFFTDWTK 621
Query: 306 ASILVSGQLYEALALDLENGMLYYST 331
++L + + E N +YY T
Sbjct: 622 MAVLKANKFTET------NPQVYYQT 641
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 182/410 (44%), Gaps = 96/410 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ + K+C+ DC + +DE GC + EC++ C + C T C+C PG L
Sbjct: 3086 RCIEMVKLCNHLDDCLDNSDE-KGCGINECQNPSISGCDHNCTDTLTSFYCSCRPGYKLM 3144
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P CSQ C N GSYIC C GY+ E D TC+ ++ +LI S
Sbjct: 3145 SDKRTCVDIDECTETPFVCSQKCENVIGSYICKCAPGYLREPDGKTCRQNSNIEPYLIFS 3204
Query: 122 NRH--------------------SILVADLEEKGK------------------DHRAQDI 143
NR+ +++ D + K + I
Sbjct: 3205 NRYYLRNLTVDGYFYSLILEGLGNVVALDFDRVEKRLYWIDTQRQVIERMFLNKTNKETI 3264
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPR 195
+ L E LA DW+ +YWLD+ L+ + V D NG +R +LA+ + PR
Sbjct: 3265 ISHRLPAAESLAVDWVSRKLYWLDAHLDSLFVSDLNGEHRRMLARHCVDVNNTFCFDNPR 3324
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G++L P G +++W DWG I RIGMDG+N+S IISTK+ WPNG+T+D +Y+A
Sbjct: 3325 GIVLHPQYG--YIYWADWGHRAYIGRIGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWA 3382
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ L +I+ LE G + + G L
Sbjct: 3383 DAHLGYIEYSDLE----------------------------------GRHRHTVCDGTLP 3408
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ + +Y WTDW + DGS R T+++T
Sbjct: 3409 HPFAITIFEDTIY-----------WTDWNTRTVEKGNKYDGSKRQTLVNT 3447
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 144/320 (45%), Gaps = 63/320 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLA-ECKHKFGLCSNTCHPTPLGA-LCTCPPG-EI 60
C+ VCD DC + +DE GC++ E +C C G +C+C G E
Sbjct: 3939 HCIPHDSVCDDADDCGDLSDE-LGCNIGKERTCAENICEQNCTQLNEGGFICSCTAGFEA 3997
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN--HTCKAINHSAAFL 118
D +C D+NECEQ G CSQ C NTKGSY C C +G+ D C A S L
Sbjct: 3998 SVFDRTSCLDINECEQFGICSQHCRNTKGSYECVCADGFTSMSDRLGKRCAAEGSSPLLL 4057
Query: 119 IISN-----------RHSILVADLE----------------------------------- 132
+ N R S + D E
Sbjct: 4058 LPDNVRIRKYNLSSERFSEYLQDEEYIQAVDYDWDPEDTGLSVVYYTVQGEGSRFGAIKR 4117
Query: 133 ------EKGKDHRAQ--DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
E G+++ Q D+ + + +G+A DW+G HIYW D + RIEV +G R
Sbjct: 4118 AYIPNFESGRNNPVQEVDLKLKYVMQPDGIAVDWVGRHIYWSDVKNKRIEVAKLDGRYRK 4177
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L ++ QP + ++P G +FWTDWG+ P+IE M+G +R+ ++ + WP GL+
Sbjct: 4178 WLISTDLDQPAAVAVNPKLGL--MFWTDWGKEPKIESAWMNGESRNVLVFGNLGWPTGLS 4235
Query: 245 LD-IATRRVYFADSKLDFID 263
+D + R+Y++D K D I+
Sbjct: 4236 IDYLNNDRIYWSDFKEDVIE 4255
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 115/252 (45%), Gaps = 37/252 (14%)
Query: 33 CKHKFGLCSNTCHPTPLGAL-CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
C + C C P P G C C G L+ D+ +C N S +
Sbjct: 2022 CSNNMNACQQICLPVPGGLFSCACATGFKLNPDNRSCSPYNSFIVVSMLSAI-------- 2073
Query: 92 ICSCNEGYVLEYDNHTCKAI--------------NHSAAFLIISNRHSILVAD---LEEK 134
G+ LE +H+ + + S+ F+ + S +++D K
Sbjct: 2074 -----RGFSLELSDHSETMVPVAGQGRNALHVDVDMSSGFIYWCDFSSSVISDNAIRRIK 2128
Query: 135 GKDHRAQDIVVSGL--DLVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDN 190
+IV G+ + V G+A DW+ G+IY+ ++ ++ IEV N T R VL K
Sbjct: 2129 PDGSSLMNIVTQGIGENGVRGIAVDWVAGNIYFTNAFVSETLIEVLRINTTYRRVLLKAT 2188
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ PR +++DP R+LFW D+G+ P+IER +D +NR+ ++S I P GL +D +
Sbjct: 2189 VDMPRHIVVDPK--NRYLFWADYGQRPKIERSSLDCTNRTVLVSEGIVTPRGLAVDRSDG 2246
Query: 251 RVYFADSKLDFI 262
VY+ D LD I
Sbjct: 2247 YVYWVDDSLDII 2258
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 101/190 (53%), Gaps = 19/190 (10%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ SG+ +G+A+DWI IY+ D I E+G+NR V+A+ +++PR ++LDP
Sbjct: 2460 VIASGIGTADGIAFDWITRRIYYSDYLNQTINSMAEDGSNRTVIAR--VSKPRAIVLDPC 2517
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W DW +IER + G+ R I+++ + P+GLTLD +Y+ D L I
Sbjct: 2518 QG--YLYWADWDMYAKIERATLGGNFRLPIVNSSLVMPSGLTLDYEEDLLYWVDPSLQRI 2575
Query: 263 DCKSL-----EIKTNVNYS----TIF-RKLYWIDEGGNGVPLKIGKAN-MDGSNASILVS 311
+ +L E+ N + T++ + +YW D +I +AN DGS + +
Sbjct: 2576 ERSTLTGMDREVIVNAHVHAFGLTLYGQHIYWTDL----YTQRIYRANKYDGSGQIAMTT 2631
Query: 312 GQLYEALALD 321
L++ ++
Sbjct: 2632 NLLFQPRGIN 2641
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 20/213 (9%)
Query: 114 SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI 173
S F ++H I L+ G++ A + V + VE LA+DWI ++YW DS I
Sbjct: 753 STIFFSDMSKHMIFKQKLDGTGREILAANRVEN----VESLAFDWISKNLYWTDSHYKSI 808
Query: 174 EVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
V R + + + PR +++ P G +LF+TDW +I R DGS+ I+
Sbjct: 809 SVMGLADKMRRTVVQ-YLNNPRSVVVHPLAG--YLFFTDWFRPAKIMRAWSDGSHLLPIV 865
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL-----------EIKTNVNYSTIFRKL 282
+T + WPNGL +D A R+Y+ D+ D I+ +L E T+ TIF +
Sbjct: 866 NTSLGWPNGLAIDWAASRLYWVDAYFDKIEHSALDGLDRRRLGRIEQMTHPFGLTIFGEH 925
Query: 283 YWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ + G +++ KA DG +++ SG Y
Sbjct: 926 LFFTDWRLGAIIRVRKA--DGREMTVIRSGIAY 956
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 130/331 (39%), Gaps = 92/331 (27%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH 138
C Q+C G + C+C G+ L DN +C N +F+++S +I LE DH
Sbjct: 2029 CQQICLPVPGGLFSCACATGFKLNPDNRSCSPYN---SFIVVSMLSAIRGFSLELS--DH 2083
Query: 139 RAQDIVVSGLDL-VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+ V+G + D G IYW D + I DN
Sbjct: 2084 SETMVPVAGQGRNALHVDVDMSSGFIYWCDFSSSVI--------------SDNA------ 2123
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI--YWPNGLTLDIATRRVYFA 255
I RI DGS+ I++ I G+ +D +YF
Sbjct: 2124 ---------------------IRRIKPDGSSLMNIVTQGIGENGVRGIAVDWVAGNIYFT 2162
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
++ F+ +E+ + +T +R++ + KA +D +
Sbjct: 2163 NA---FVSETLIEV---LRINTTYRRV-------------LLKATVD-----------MP 2192
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
+ +D +N R+LFW D+G+ P+IER +D +NR+ ++S I P GL +
Sbjct: 2193 RHIVVDPKN-----------RYLFWADYGQRPKIERSSLDCTNRTVLVSEGIVTPRGLAV 2241
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
D + VY+ D LD I + G G +VI
Sbjct: 2242 DRSDGYVYWVDDSLDIIARIHISG-GNSEVI 2271
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%)
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
+LF+TDW +I R DGS+ I++T + WPNGL +D A R+Y+ D+ D I+
Sbjct: 839 YLFFTDWFRPAKIMRAWSDGSHLLPIVNTSLGWPNGLAIDWAASRLYWVDAYFDKIEHSA 898
Query: 397 YDGTGRQQVILIDLMVE 413
DG R+++ I+ M
Sbjct: 899 LDGLDRRRLGRIEQMTH 915
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 45/181 (24%)
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
G + T+I++ I +G+ D TRR+Y++D ++
Sbjct: 2454 GIHTPTVIASGIGTADGIAFDWITRRIYYSD---------------------------YL 2486
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
++ I DGSN +++ A+ LD C +L+W DW
Sbjct: 2487 NQ-------TINSMAEDGSNRTVIARVSKPRAIVLD-----------PCQGYLYWADWDM 2528
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+IER + G+ R I+++ + P+GLTLD +Y+ D L I+ G R+ +
Sbjct: 2529 YAKIERATLGGNFRLPIVNSSLVMPSGLTLDYEEDLLYWVDPSLQRIERSTLTGMDREVI 2588
Query: 406 I 406
+
Sbjct: 2589 V 2589
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 143/383 (37%), Gaps = 105/383 (27%)
Query: 71 MNECEQPGYCSQMCT-NTKGSYI--CSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL 127
MN C CS +C +++G Y C+C G+ L D C + FLI +H I
Sbjct: 1701 MNPCAF-ARCSHLCLLSSQGPYFYSCACPSGWSLASDLMNC--LRDDQPFLITVRQHIIF 1757
Query: 128 VADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
L + K + A + +SG+ + +D +IY
Sbjct: 1758 GISLNPEVKSNDAM-VPISGIQNGLDVEFDDSEQYIY----------------------- 1793
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPN-GLTL 245
W ENP I R+ DG+NR+ S + + L L
Sbjct: 1794 -------------------------WVENPGEIHRVKTDGTNRTVFTSLSMVGSSMNLAL 1828
Query: 246 DIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN-GVPLKIGKANMDGS 304
D +R +Y + + +S+E+ T ++ +RK ++G GV IG
Sbjct: 1829 DWISRNLYSTNPRT-----QSIEVLT-LHGVIRYRKTLITNDGTALGVGFPIG------- 1875
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+ +D G LY+S TD G +I MDG++ TI +
Sbjct: 1876 -------------ITVDPVRGKLYWSDQG-------TDSGIPAKIASANMDGTSIKTIFT 1915
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGV 424
+ +TLDI +++Y+A + I+ N DGTGR +ILI +
Sbjct: 1916 GNLEHLECVTLDIGEQKLYWAVTGRGVIERGNVDGTGR--MILIHELSH----------- 1962
Query: 425 PALALDLENGMLYYSTEGAEFLK 447
+ + LYYS E E ++
Sbjct: 1963 -PWGIAVYGSFLYYSDEQYEAIE 1984
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 130/313 (41%), Gaps = 42/313 (13%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNITQ-PRGMMLDPSPGTRWLFW 210
GL D+ +Y++DS L+ I+ CD NG + R V+A D I + P + L ++W
Sbjct: 1602 GLTIDYPNRLLYFMDSYLDYIDFCDYNGHHRRQVIASDLIIRHPYALTLFEDS----VYW 1657
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
TD ++ G N+S ++ I WP G+ + + + + + F C L +
Sbjct: 1658 TDRATRRVMQANKWHGGNQSVVM-YNIQWPLGI-VAVHPLKQPNSMNPCAFARCSHLCLL 1715
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL------EN 324
++ ++ +G L N + L++ + + + L +
Sbjct: 1716 SSQG------PYFYSCACPSGWSLASDLMNCLRDDQPFLITVRQHIIFGISLNPEVKSND 1769
Query: 325 GMLYYSTLK---------CTRWLFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPN-GL 373
M+ S ++ ++++W ENP I R+ DG+NR+ S + + L
Sbjct: 1770 AMVPISGIQNGLDVEFDDSEQYIYWV---ENPGEIHRVKTDGTNRTVFTSLSMVGSSMNL 1826
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND--LMGDNGVPALALDL 431
LD +R +Y + + I+ G R + LI TND +G + +D
Sbjct: 1827 ALDWISRNLYSTNPRTQSIEVLTLHGVIRYRKTLI------TNDGTALGVGFPIGITVDP 1880
Query: 432 ENGMLYYSTEGAE 444
G LY+S +G +
Sbjct: 1881 VRGKLYWSDQGTD 1893
>gi|13562118|ref|NP_110454.1| low-density lipoprotein receptor-related protein 2 precursor [Rattus
norvegicus]
gi|1708867|sp|P98158.1|LRP2_RAT RecName: Full=Low-density lipoprotein receptor-related protein 2;
Short=LRP-2; AltName: Full=Glycoprotein 330; Short=gp330;
AltName: Full=Megalin; Flags: Precursor
gi|561853|gb|AAA51369.1| megalin [Rattus norvegicus]
Length = 4660
Score = 240 bits (613), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 167/301 (55%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+NL+ +CDG DCPNG DE P C+ C H G C++ C P GA C CP G L+ND
Sbjct: 1326 CINLSALCDGVFDCPNGTDESPLCNQDSCSHFNGGCTHQCMQGPFGATCLCPLGYQLAND 1385
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
+ TC+D+NEC+ PG+CSQ C N +GS+ C+C+ Y LE D TCK L++++R
Sbjct: 1386 TKTCEDINECDIPGFCSQHCVNMRGSFRCACDPEYTLESDGRTCKVTGSENPLLVVASRD 1445
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+V ++ + G D R
Sbjct: 1446 KIIVDNITAHTHNLYSLVQDVSFVVALDFDSVTGRVFWSDLLQGKTWSVFQNGTDKRV-- 1503
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ SGL + E +A DWIG ++YW D L IEV +G++R VL N+T+PRG+ LDP
Sbjct: 1504 VHDSGLSVTEMIAVDWIGRNLYWTDYALETIEVSKIDGSHRTVLISKNVTKPRGLALDPR 1563
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +FW+DWG +PRIER MDG+ R+ I+ KIYWP GL++D R +YF D+ LD+I
Sbjct: 1564 MGDNVMFWSDWGHHPRIERASMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYI 1623
Query: 263 D 263
+
Sbjct: 1624 E 1624
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/343 (36%), Positives = 178/343 (51%), Gaps = 63/343 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
RC+++ KVCDG DCP G DE G C + C C CH TP G C CPPG
Sbjct: 277 RCISIDKVCDGVPDCPEGDDENNVTSGRTCGMGVCS--VLNCEYQCHQTPFGGECFCPPG 334
Query: 59 EIL-SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I+ SNDS TC D ++C+ G C Q C N +G + C C EGY+LE H + + SAA
Sbjct: 335 HIINSNDSRTCIDFDDCQIWGICDQKCENRQGRHQCLCEEGYILERGQHCKSSDSFSAAS 394
Query: 118 LIISNRHSILVADLEEKG--------------------KDHRA----------------- 140
+I SN +LV DL + + HR
Sbjct: 395 VIFSNGRDLLVGDLHGRNFRILAESKNRGMVMGVDFHYQKHRVFWTDPMQEKVFSTDING 454
Query: 141 ---QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
Q+I+ +D E LA DWI +Y +++++NRI+V + G R+ L +N+ PRG+
Sbjct: 455 LNTQEILNVSVDTPENLAVDWINNKLYLVETKVNRIDVVNLEGNQRVTLITENLGHPRGI 514
Query: 198 MLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
LDP+ G +LF++DWG P++ER MDGSNR +++TK+ WP G+TLD+ ++RVY+
Sbjct: 515 ALDPTVG--YLFFSDWGSLSGQPKVERAFMDGSNRKDLVTTKVGWPAGITLDLVSKRVYW 572
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
DS+ D+I+ V Y I RK + GG+ VP G
Sbjct: 573 VDSRYDYIE--------TVTYDGIQRKT--VARGGSLVPHPFG 605
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 183/411 (44%), Gaps = 98/411 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + +VC+ DC + +DE GC + EC C + C T C+C PG L
Sbjct: 3088 HCIEMGRVCNHVDDCSDNSDEK-GCGINECLDSSISRCDHNCTDTITSFYCSCLPGYKLM 3146
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D +C D++EC E P CSQ C N GSYIC C GY+ E D +C+ ++ +LI S
Sbjct: 3147 SDKRSCVDIDECKESPQLCSQKCENVVGSYICKCAPGYIREPDGKSCRQNSNIEPYLIFS 3206
Query: 122 NRHSI-------------------LVA-------------DLEEK-------GKDHRAQD 142
NR+ I +VA D E++ K +R +
Sbjct: 3207 NRYYIRNLTTDGSSYSLILQGLGNVVALDFDRVEKRLYWIDAEKQIIERMFLNKTNR-ET 3265
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQP 194
I+ L E LA DW+ +YWLD+ L+ + V D G +R ++A+ + P
Sbjct: 3266 IINHRLRRAESLAVDWVSRKLYWLDAILDCLFVSDLEGRHRKMIAQHCVDANNTFCFEHP 3325
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
RG++L P G ++W DWG + I RIGMDG+N+S IISTKI WPN +T+D +Y+
Sbjct: 3326 RGIVLHPQRGH--VYWADWGVHAYIGRIGMDGTNKSVIISTKIEWPNAITIDYTNDLLYW 3383
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
AD+ L +I+ LE G + + G L
Sbjct: 3384 ADAHLGYIEFSDLE----------------------------------GHHRHTVYDGSL 3409
Query: 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
AL ++ T +FWTDW + DGS R +++T
Sbjct: 3410 PHPFAL-----TIFEDT------VFWTDWNTRTVEKGNKYDGSGRVVLVNT 3449
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 100/186 (53%), Gaps = 13/186 (6%)
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
++ +++W + L T V+ + + L + + I R LYW D +
Sbjct: 1477 VTGRVFWSD--LLQGKTWSVFQNGTDKRVVHDSGLSVTEMIAVDWIGRNLYWTDYALETI 1534
Query: 293 PLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+ + +DGS+ ++L+S + + L L+ M +FW+DWG +PRIER
Sbjct: 1535 EV----SKIDGSHRTVLISKNVTKPRGLALDPRMG-------DNVMFWSDWGHHPRIERA 1583
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
MDG+ R+ I+ KIYWP GL++D R +YF D+ LD+I+FC+YDG R+QVI DL++
Sbjct: 1584 SMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYIEFCDYDGHNRRQVIASDLVL 1643
Query: 413 EFTNDL 418
+ L
Sbjct: 1644 HHPHAL 1649
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 122/255 (47%), Gaps = 50/255 (19%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+++S + + +G+A+DWI IY+ D I E+G+NR V+A+ +++PR ++LDP
Sbjct: 2461 VLLSNIGVTDGIAFDWINRRIYYSDFSNQTINSMAEDGSNRAVIAR--VSKPRAIVLDPC 2518
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWG N +IER + G+ R I++T + WPNGL LD+ T +Y+AD+ L
Sbjct: 2519 RG--YMYWTDWGTNAKIERATLGGNFRVPIVNTSLVWPNGLALDLETDLLYWADASLQ-- 2574
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
KI ++ + G+N ++VS +
Sbjct: 2575 --------------------------------KIERSTLTGTNREVVVSTAFHSF----- 2597
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G+ Y ++++WTD DGS+ + + P+G++ + T+R
Sbjct: 2598 --GLTVYG-----QYIYWTDLYTRKIYRANKYDGSDLVAMTTRLPTQPSGISTVVKTQRQ 2650
Query: 383 YFADSKLDFIDFCNY 397
++ F C++
Sbjct: 2651 QCSNPCDQFNGGCSH 2665
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 97/177 (54%), Gaps = 15/177 (8%)
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
R D+ + L +GLA DW+G HIYW D++ RIEV +G R L + QP +
Sbjct: 4134 REVDLGLKYLMQPDGLAVDWVGRHIYWSDAKSQRIEVATLDGRYRKWLITTQLDQPAAIA 4193
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADS 257
++P G +FWTD G+ P+IE M+G +RS ++S + WPNGL++D + RVY++DS
Sbjct: 4194 VNPKLGL--MFWTDQGKQPKIESAWMNGEHRSVLVSENLGWPNGLSIDYLNDDRVYWSDS 4251
Query: 258 KLDFIDC-------KSLEIKTNVNYST--IFR-KLYWI--DEGGNGVPLKIGKANMD 302
K D I+ + L I + + IF KLYW+ ++G K GK N +
Sbjct: 4252 KEDVIEAIKYDGTDRRLIINEAMKPFSLDIFEDKLYWVAKEKGEVWRQNKFGKENKE 4308
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 57/238 (23%)
Query: 77 PGYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NR 123
P C Q+C G + C+C G+ L D +C N +F+++S +
Sbjct: 2027 PNACQQICLPVPGGMFSCACASGFKLSPDGRSCSPYN---SFMVVSMLPAVRGFSLELSD 2083
Query: 124 HSILVADLEEKGKDHRAQDIVVS------------------------------------- 146
HS + + +G++ D+ V+
Sbjct: 2084 HSEAMVPVAGQGRNVLHADVDVANGFIYWCDFSSSVRSSNGIRRIKPDGSNFTNVVTYGI 2143
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
G + + G+A DW G++Y+ ++ + IEV N T R VL K ++ PR +++DP
Sbjct: 2144 GANGIRGVALDWAAGNLYFTNAFVYETLIEVLRINTTYRRVLLKVSVDMPRHIIVDPK-- 2201
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
R+LFW D+G+ P+IER +D +NR+ ++S I P GL +D T +Y+ D LD I
Sbjct: 2202 HRYLFWADYGQKPKIERSFLDCTNRTVLVSEGIVTPRGLAMDHDTGYIYWVDDSLDLI 2259
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 140/314 (44%), Gaps = 67/314 (21%)
Query: 78 GYCSQMCT------NTKGSYICSCNEGYVLEYDNHTCKAINH------------------ 113
G C+Q+C N Y C C G+ L+ D H C A+ +
Sbjct: 667 GGCAQVCVLSHRTDNGGLGYRCKCEFGFELDDDEHRCVAVKNFLLFSSKTAVRGIPFTLS 726
Query: 114 -----------SAAFLI---ISNRHS-ILVADLEE-----KGKDHRAQDIVVSG-LDLVE 152
S +F + +HS + +DL + + D ++++ + L+ VE
Sbjct: 727 TQEDVMVPVTGSPSFFVGIDFDAQHSTVFYSDLSKDIIYKQKIDGTGKEVITANRLESVE 786
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
L +DWI ++YW D L + V + + R +++ N+ PR +++ P+ G ++F +
Sbjct: 787 CLTFDWISRNLYWTDGGLKSVTVLRLADKSRRQIIS--NLNNPRSIVVHPTAG--YMFLS 842
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKLDFID 263
DW +I R DGS+ I++T + WPNGL +D + R+Y+ D S LD +D
Sbjct: 843 DWFRPAKIMRAWSDGSHLMPIVNTSLGWPNGLAIDWSASRLYWVDAFFDKIEHSTLDGLD 902
Query: 264 CKSLEIKTNVNYS---TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG----QLYE 316
K L + + T+F+ +I + G +++ K+ DG + +++ G +
Sbjct: 903 RKRLGHVDQMTHPFGLTVFKDNVFITDWRLGAIIRVRKS--DGGDMTVIRRGISSVMHVK 960
Query: 317 ALALDLENGMLYYS 330
A DL+ G Y S
Sbjct: 961 AYDADLQTGSNYCS 974
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 83/147 (56%), Gaps = 19/147 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ R +YW D +I A +DG L++ QL + A+A++ + G++
Sbjct: 4154 VGRHIYWSDAKSQ----RIEVATLDGRYRKWLITTQLDQPAAIAVNPKLGLM-------- 4201
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDF 394
FWTD G+ P+IE M+G +RS ++S + WPNGL++D + RVY++DSK D I+
Sbjct: 4202 ---FWTDQGKQPKIESAWMNGEHRSVLVSENLGWPNGLSIDYLNDDRVYWSDSKEDVIEA 4258
Query: 395 CNYDGTGRQQVILIDLMVEFTNDLMGD 421
YDGT R ++I+ + M F+ D+ D
Sbjct: 4259 IKYDGTDR-RLIINEAMKPFSLDIFED 4284
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 15/142 (10%)
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
++ + + + I R++Y+ D I DGSN +++ A+ LD
Sbjct: 2464 SNIGVTDGIAFDWINRRIYYSDFSNQ----TINSMAEDGSNRAVIARVSKPRAIVLD--- 2516
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384
C +++WTDWG N +IER + G+ R I++T + WPNGL LD+ T +Y+
Sbjct: 2517 --------PCRGYMYWTDWGTNAKIERATLGGNFRVPIVNTSLVWPNGLALDLETDLLYW 2568
Query: 385 ADSKLDFIDFCNYDGTGRQQVI 406
AD+ L I+ GT R+ V+
Sbjct: 2569 ADASLQKIERSTLTGTNREVVV 2590
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 29/186 (15%)
Query: 242 GLTLDIATRRVYFADSKLDFI-------------DCKSLEIKTNVNYSTIFRKLYWIDEG 288
G+ D V+++D D I LE + + I R LYW D G
Sbjct: 744 GIDFDAQHSTVFYSDLSKDIIYKQKIDGTGKEVITANRLESVECLTFDWISRNLYWTDGG 803
Query: 289 GNGVP-LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
V L++ D S I+ + ++ + G ++F +DW
Sbjct: 804 LKSVTVLRLA----DKSRRQIISNLNNPRSIVVHPTAG-----------YMFLSDWFRPA 848
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+I R DGS+ I++T + WPNGL +D + R+Y+ D+ D I+ DG R+++
Sbjct: 849 KIMRAWSDGSHLMPIVNTSLGWPNGLAIDWSASRLYWVDAFFDKIEHSTLDGLDRKRLGH 908
Query: 408 IDLMVE 413
+D M
Sbjct: 909 VDQMTH 914
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 25/182 (13%)
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
D KS +N+ IF Y+I DGS+ S+++ G L +ALD
Sbjct: 3189 DGKSCRQNSNIEPYLIFSNRYYIR-----------NLTTDGSSYSLILQG-LGNVVALDF 3236
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+ + + L+W D E IER+ ++ +NR TII+ ++ L +D +R++
Sbjct: 3237 D---------RVEKRLYWID-AEKQIIERMFLNKTNRETIINHRLRRAESLAVDWVSRKL 3286
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
Y+ D+ LD + D GR + ++ V+ N ++ + L + G +Y++ G
Sbjct: 3287 YWLDAILDCLFV--SDLEGRHRKMIAQHCVDANNTFCFEHPR-GIVLHPQRGHVYWADWG 3343
Query: 443 AE 444
Sbjct: 3344 VH 3345
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 94/237 (39%), Gaps = 48/237 (20%)
Query: 213 WGENP-RIERIGMDGSNRSTII-STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DGSNR+ + + GL LD +R +Y+ I+ +L+
Sbjct: 1795 WVENPGEIHRVKTDGSNRTVFAPLSLLGSSLGLALDWVSRNIYYTTPASRSIEVLTLKGD 1854
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
T + I +G PL +G +A+D G LY+S
Sbjct: 1855 TRYGKTLI---------ANDGTPLGVG----------------FPVGIAVDPARGKLYWS 1889
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 390
TD G +I MDG++ + + + +TLDI +++Y+A +
Sbjct: 1890 D-------HGTDSGVPAKIASANMDGTSLKILFTGNLQHLEVVTLDIQEQKLYWAVTSRG 1942
Query: 391 FIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I+ N DGT R +IL+ + L + LYYS E E ++
Sbjct: 1943 VIERGNVDGTER--MILVHHLAH------------PWGLVVYGSFLYYSDEQYEVIE 1985
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 129/315 (40%), Gaps = 46/315 (14%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNI-TQPRGMMLDPSPGTRWLFW 210
GL+ D+ IY++D+ L+ IE CD +G N R V+A D + P + L +++W
Sbjct: 1603 GLSIDYPNRLIYFMDAYLDYIEFCDYDGHNRRQVIASDLVLHHPHALTL----FEDFVYW 1658
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
TD G ++ G N+S ++ + ++ P G+T +R+ + C S
Sbjct: 1659 TDRGTRQVMQANKWHGGNQSVVMYS-VHQPLGITAIHPSRQPPSRNP------CASASCS 1711
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS--GQLYEALALDLE----N 324
S + Y +G L N + L+S + ++LD E +
Sbjct: 1712 HLCLLSAQAPRHYSC-ACPSGWNLSDDSVNCVRGDQPFLMSVRDNIIFGISLDPEVKSND 1770
Query: 325 GMLYYSTLKCTRWLFWTD------WGENP-RIERIGMDGSNRSTII-STKIYWPNGLTLD 376
M+ S ++ + + D W ENP I R+ DGSNR+ + + GL LD
Sbjct: 1771 AMVPISGIQHGYDVEFDDSEQFIYWVENPGEIHRVKTDGSNRTVFAPLSLLGSSLGLALD 1830
Query: 377 IATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVP-------ALAL 429
+R +Y+ I+ G R + L+ ++G P +A+
Sbjct: 1831 WVSRNIYYTTPASRSIEVLTLKGDTR-----------YGKTLIANDGTPLGVGFPVGIAV 1879
Query: 430 DLENGMLYYSTEGAE 444
D G LY+S G +
Sbjct: 1880 DPARGKLYWSDHGTD 1894
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 147/412 (35%), Gaps = 113/412 (27%)
Query: 28 CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCS------ 81
C A C H L + P C CP G LS+DSV C +QP S
Sbjct: 1705 CASASCSHLCLLSAQA----PRHYSCACPSGWNLSDDSVNCVRG---DQPFLMSVRDNII 1757
Query: 82 -------QMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK 134
++ +N I GY +E+D+ S F+ +E
Sbjct: 1758 FGISLDPEVKSNDAMVPISGIQHGYDVEFDD--------SEQFIYW----------VENP 1799
Query: 135 GKDHRAQD--------IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--- 183
G+ HR + +S L GLA DW+ +IY+ IEV G R
Sbjct: 1800 GEIHRVKTDGSNRTVFAPLSLLGSSLGLALDWVSRNIYYTTPASRSIEVLTLKGDTRYGK 1859
Query: 184 IVLAKD----NITQPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRSTIIST 235
++A D + P G+ +DP+ G L+W+D G + +I MDG++ + +
Sbjct: 1860 TLIANDGTPLGVGFPVGIAVDPARGK--LYWSDHGTDSGVPAKIASANMDGTSLKILFTG 1917
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
+ +TLDI +++Y+A + I+
Sbjct: 1918 NLQHLEVVTLDIQEQKLYWAVTSRGVIE-------------------------------- 1945
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
+ N+DG+ ILV L L + LYYS + IER+
Sbjct: 1946 --RGNVDGTERMILVH-HLAHPWGLVVYGSFLYYSD------------EQYEVIERVDKS 1990
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
N ++ + + GL RVY + D + C+ + QQ+ L
Sbjct: 1991 SGNNKVVLRDNVPYLRGL-------RVYHRRNAADSSNGCSNNPNACQQICL 2035
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 107/496 (21%), Positives = 174/496 (35%), Gaps = 102/496 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSN-TCHPTPLGA--LCTCPPGEIL 61
C+ + VCD DC +GADE C C + CSN C P+ + CP G
Sbjct: 80 CIPSSWVCDEDKDCSDGADEQQNCAGTTCSAQQMTCSNGQCIPSEYRCDHVSDCPDGSDE 139
Query: 62 SN------DSVTCQD------MNECEQPGYCSQMCTNTKGSYICSCNE-----------G 98
N D +TC + C+Q C + +CS E
Sbjct: 140 RNCHYPTCDQLTCANGACYNTSQRCDQKVDCRDSSDEANCTTLCSQKEFECGSGECILRA 199
Query: 99 YVLEYDN--------HTCKAINHSAAFLIISNRHSI---LVADLEEKGKDHRAQDIVVSG 147
YV ++DN C SN I V D ++ +D +D S
Sbjct: 200 YVCDHDNDCEDNSDERNCNYDTCGGHQFTCSNGQCINQNWVCDGDDDCQDSGDEDGCESN 259
Query: 148 LDLVEGLAYDWI---GGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR--GMMLDPS 202
+W G +D + + C E ++N+T R GM +
Sbjct: 260 QSHHRCYPREWACPGSGRCISIDKVCDGVPDCPEGDD------ENNVTSGRTCGMGV--- 310
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ + T + + P G ++ R + +DF
Sbjct: 311 ----------------CSVLNCEYQCHQTPFGGECFCPPGHIINSNDSR-----TCIDFD 349
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS----------- 311
DC+ I + R +EG + K++ S AS++ S
Sbjct: 350 DCQIWGICDQKCENRQGRHQCLCEEGYILERGQHCKSSDSFSAASVIFSNGRDLLVGDLH 409
Query: 312 GQLYEALALDLENGMLYYSTLKCTRW-LFWTDWGENPRIERI---GMDGSNRSTIISTKI 367
G+ + LA GM+ + +FWTD P E++ ++G N I++ +
Sbjct: 410 GRNFRILAESKNRGMVMGVDFHYQKHRVFWTD----PMQEKVFSTDINGLNTQEILNVSV 465
Query: 368 YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPAL 427
P L +D ++Y ++K++ ID N +G Q+V LI T +L G+
Sbjct: 466 DTPENLAVDWINNKLYLVETKVNRIDVVNLEGN--QRVTLI------TENLGHPRGI--- 514
Query: 428 ALDLENGMLYYSTEGA 443
ALD G L++S G+
Sbjct: 515 ALDPTVGYLFFSDWGS 530
>gi|149022163|gb|EDL79057.1| rCG26871, isoform CRA_b [Rattus norvegicus]
Length = 4609
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 167/301 (55%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+NL+ +CDG DCPNG DE P C+ C H G C++ C P GA C CP G L+ND
Sbjct: 1326 CINLSALCDGVFDCPNGTDESPLCNQDSCSHFNGGCTHQCMQGPFGATCLCPLGYQLAND 1385
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
+ TC+D+NEC+ PG+CSQ C N +GS+ C+C+ Y LE D TCK L++++R
Sbjct: 1386 TKTCEDINECDIPGFCSQHCVNMRGSFRCACDPEYTLESDGRTCKVTGSENPLLVVASRD 1445
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+V ++ + G D R
Sbjct: 1446 KIIVDNITAHTHNLYSLVQDVSFVVALDFDSVTGRVFWSDLLQGKTWSVFQNGTDKRV-- 1503
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ SGL + E +A DWIG ++YW D L IEV +G++R VL N+T+PRG+ LDP
Sbjct: 1504 VHDSGLSVTEMIAVDWIGRNLYWTDYALETIEVSKIDGSHRTVLISKNVTKPRGLALDPR 1563
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +FW+DWG +PRIER MDG+ R+ I+ KIYWP GL++D R +YF D+ LD+I
Sbjct: 1564 MGDNVMFWSDWGHHPRIERASMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYI 1623
Query: 263 D 263
+
Sbjct: 1624 E 1624
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/343 (36%), Positives = 178/343 (51%), Gaps = 63/343 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
RC+++ KVCDG DCP G DE G C + C C CH TP G C CPPG
Sbjct: 277 RCISIDKVCDGVPDCPEGDDENNVTSGRTCGMGVCS--VLNCEYQCHQTPFGGECFCPPG 334
Query: 59 EIL-SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I+ SNDS TC D ++C+ G C Q C N +G + C C EGY+LE H + + SAA
Sbjct: 335 HIINSNDSRTCIDFDDCQIWGICDQKCENRQGRHQCLCEEGYILERGQHCKSSDSFSAAS 394
Query: 118 LIISNRHSILVADLEEKG--------------------KDHRA----------------- 140
+I SN +LV DL + + HR
Sbjct: 395 VIFSNGRDLLVGDLHGRNFRILAESKNRGMVMGVDFHYQKHRVFWTDPMQEKVFSTDING 454
Query: 141 ---QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
Q+I+ +D E LA DWI +Y +++++NRI+V + G R+ L +N+ PRG+
Sbjct: 455 LNTQEILNVSVDTPENLAVDWINNKLYLVETKVNRIDVVNLEGNQRVTLITENLGHPRGI 514
Query: 198 MLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
LDP+ G +LF++DWG P++ER MDGSNR +++TK+ WP G+TLD+ ++RVY+
Sbjct: 515 ALDPTVG--YLFFSDWGSLSGQPKVERAFMDGSNRKDLVTTKVGWPAGITLDLVSKRVYW 572
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
DS+ D+I+ V Y I RK + GG+ VP G
Sbjct: 573 VDSRYDYIE--------TVTYDGIQRKT--VARGGSLVPHPFG 605
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 168/364 (46%), Gaps = 55/364 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + +VC+ DC + +DE GC + EC C + C T C+C PG L
Sbjct: 3088 HCIEMGRVCNHVDDCSDNSDEK-GCGINECLDSSISRCDHNCTDTITSFYCSCLPGYKLM 3146
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D +C D++EC E P CSQ C N GSYIC C GY+ E D +C+ ++ +LI S
Sbjct: 3147 SDKRSCVDIDECKESPQLCSQKCENVVGSYICKCAPGYIREPDGKSCRQNSNIEPYLIFS 3206
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
NR+ I D + +++ GL V L +D + +YW+D+ IE N T
Sbjct: 3207 NRYYI-----RNLTTDGSSYSLILQGLGNVVALDFDRVEKRLYWIDAEKQIIERMFLNKT 3261
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
NR + + + + +D +R ++W DWG + I RIGMDG+N+S IISTKI WPN
Sbjct: 3262 NRETIINHRLRRAESLAVDWV--SRHVYWADWGVHAYIGRIGMDGTNKSVIISTKIEWPN 3319
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+T+D +Y+AD+ L +I+ LE
Sbjct: 3320 AITIDYTNDLLYWADAHLGYIEFSDLE--------------------------------- 3346
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
G + + G L AL ++ T +FWTDW + DGS R
Sbjct: 3347 -GHHRHTVYDGSLPHPFAL-----TIFEDT------VFWTDWNTRTVEKGNKYDGSGRVV 3394
Query: 362 IIST 365
+++T
Sbjct: 3395 LVNT 3398
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 100/186 (53%), Gaps = 13/186 (6%)
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
++ +++W + L T V+ + + L + + I R LYW D +
Sbjct: 1477 VTGRVFWSD--LLQGKTWSVFQNGTDKRVVHDSGLSVTEMIAVDWIGRNLYWTDYALETI 1534
Query: 293 PLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+ + +DGS+ ++L+S + + L L+ M +FW+DWG +PRIER
Sbjct: 1535 EV----SKIDGSHRTVLISKNVTKPRGLALDPRMG-------DNVMFWSDWGHHPRIERA 1583
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
MDG+ R+ I+ KIYWP GL++D R +YF D+ LD+I+FC+YDG R+QVI DL++
Sbjct: 1584 SMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYIEFCDYDGHNRRQVIASDLVL 1643
Query: 413 EFTNDL 418
+ L
Sbjct: 1644 HHPHAL 1649
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 122/255 (47%), Gaps = 50/255 (19%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+++S + + +G+A+DWI IY+ D I E+G+NR V+A+ +++PR ++LDP
Sbjct: 2461 VLLSNIGVTDGIAFDWINRRIYYSDFSNQTINSMAEDGSNRAVIAR--VSKPRAIVLDPC 2518
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWG N +IER + G+ R I++T + WPNGL LD+ T +Y+AD+ L
Sbjct: 2519 RG--YMYWTDWGTNAKIERATLGGNFRVPIVNTSLVWPNGLALDLETDLLYWADASLQ-- 2574
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
KI ++ + G+N ++VS +
Sbjct: 2575 --------------------------------KIERSTLTGTNREVVVSTAFHSF----- 2597
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G+ Y ++++WTD DGS+ + + P+G++ + T+R
Sbjct: 2598 --GLTVYG-----QYIYWTDLYTRKIYRANKYDGSDLVAMTTRLPTQPSGISTVVKTQRQ 2650
Query: 383 YFADSKLDFIDFCNY 397
++ F C++
Sbjct: 2651 QCSNPCDQFNGGCSH 2665
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 97/177 (54%), Gaps = 15/177 (8%)
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
R D+ + L +GLA DW+G HIYW D++ RIEV +G R L + QP +
Sbjct: 4083 REVDLGLKYLMQPDGLAVDWVGRHIYWSDAKSQRIEVATLDGRYRKWLITTQLDQPAAIA 4142
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADS 257
++P G +FWTD G+ P+IE M+G +RS ++S + WPNGL++D + RVY++DS
Sbjct: 4143 VNPKLGL--MFWTDQGKQPKIESAWMNGEHRSVLVSENLGWPNGLSIDYLNDDRVYWSDS 4200
Query: 258 KLDFIDC-------KSLEIKTNVNYST--IFR-KLYWI--DEGGNGVPLKIGKANMD 302
K D I+ + L I + + IF KLYW+ ++G K GK N +
Sbjct: 4201 KEDVIEAIKYDGTDRRLIINEAMKPFSLDIFEDKLYWVAKEKGEVWRQNKFGKENKE 4257
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 57/238 (23%)
Query: 77 PGYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NR 123
P C Q+C G + C+C G+ L D +C N +F+++S +
Sbjct: 2027 PNACQQICLPVPGGMFSCACASGFKLSPDGRSCSPYN---SFMVVSMLPAVRGFSLELSD 2083
Query: 124 HSILVADLEEKGKDHRAQDIVVS------------------------------------- 146
HS + + +G++ D+ V+
Sbjct: 2084 HSEAMVPVAGQGRNVLHADVDVANGFIYWCDFSSSVRSSNGIRRIKPDGSNFTNVVTYGI 2143
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
G + + G+A DW G++Y+ ++ + IEV N T R VL K ++ PR +++DP
Sbjct: 2144 GANGIRGVALDWAAGNLYFTNAFVYETLIEVLRINTTYRRVLLKVSVDMPRHIIVDPK-- 2201
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
R+LFW D+G+ P+IER +D +NR+ ++S I P GL +D T +Y+ D LD I
Sbjct: 2202 HRYLFWADYGQKPKIERSFLDCTNRTVLVSEGIVTPRGLAMDHDTGYIYWVDDSLDLI 2259
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 140/314 (44%), Gaps = 67/314 (21%)
Query: 78 GYCSQMCT------NTKGSYICSCNEGYVLEYDNHTCKAINH------------------ 113
G C+Q+C N Y C C G+ L+ D H C A+ +
Sbjct: 667 GGCAQVCVLSHRTDNGGLGYRCKCEFGFELDDDEHRCVAVKNFLLFSSKTAVRGIPFTLS 726
Query: 114 -----------SAAFLI---ISNRHS-ILVADLEE-----KGKDHRAQDIVVSG-LDLVE 152
S +F + +HS + +DL + + D ++++ + L+ VE
Sbjct: 727 TQEDVMVPVTGSPSFFVGIDFDAQHSTVFYSDLSKDIIYKQKIDGTGKEVITANRLESVE 786
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
L +DWI ++YW D L + V + + R +++ N+ PR +++ P+ G ++F +
Sbjct: 787 CLTFDWISRNLYWTDGGLKSVTVLRLADKSRRQIIS--NLNNPRSIVVHPTAG--YMFLS 842
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKLDFID 263
DW +I R DGS+ I++T + WPNGL +D + R+Y+ D S LD +D
Sbjct: 843 DWFRPAKIMRAWSDGSHLMPIVNTSLGWPNGLAIDWSASRLYWVDAFFDKIEHSTLDGLD 902
Query: 264 CKSLEIKTNVNYS---TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG----QLYE 316
K L + + T+F+ +I + G +++ K+ DG + +++ G +
Sbjct: 903 RKRLGHVDQMTHPFGLTVFKDNVFITDWRLGAIIRVRKS--DGGDMTVIRRGISSVMHVK 960
Query: 317 ALALDLENGMLYYS 330
A DL+ G Y S
Sbjct: 961 AYDADLQTGSNYCS 974
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 76/133 (57%), Gaps = 13/133 (9%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+++ + ++LYWID I + ++ +N +++ +L A +L ++
Sbjct: 3234 LDFDRVEKRLYWIDAEKQ----IIERMFLNKTNRETIINHRLRRAESLAVD--------- 3280
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
+R ++W DWG + I RIGMDG+N+S IISTKI WPN +T+D +Y+AD+ L +I
Sbjct: 3281 WVSRHVYWADWGVHAYIGRIGMDGTNKSVIISTKIEWPNAITIDYTNDLLYWADAHLGYI 3340
Query: 393 DFCNYDGTGRQQV 405
+F + +G R V
Sbjct: 3341 EFSDLEGHHRHTV 3353
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 83/147 (56%), Gaps = 19/147 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ R +YW D +I A +DG L++ QL + A+A++ + G++
Sbjct: 4103 VGRHIYWSDAKSQ----RIEVATLDGRYRKWLITTQLDQPAAIAVNPKLGLM-------- 4150
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDF 394
FWTD G+ P+IE M+G +RS ++S + WPNGL++D + RVY++DSK D I+
Sbjct: 4151 ---FWTDQGKQPKIESAWMNGEHRSVLVSENLGWPNGLSIDYLNDDRVYWSDSKEDVIEA 4207
Query: 395 CNYDGTGRQQVILIDLMVEFTNDLMGD 421
YDGT R ++I+ + M F+ D+ D
Sbjct: 4208 IKYDGTDR-RLIINEAMKPFSLDIFED 4233
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 15/142 (10%)
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
++ + + + I R++Y+ D I DGSN +++ A+ LD
Sbjct: 2464 SNIGVTDGIAFDWINRRIYYSDFSNQ----TINSMAEDGSNRAVIARVSKPRAIVLD--- 2516
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384
C +++WTDWG N +IER + G+ R I++T + WPNGL LD+ T +Y+
Sbjct: 2517 --------PCRGYMYWTDWGTNAKIERATLGGNFRVPIVNTSLVWPNGLALDLETDLLYW 2568
Query: 385 ADSKLDFIDFCNYDGTGRQQVI 406
AD+ L I+ GT R+ V+
Sbjct: 2569 ADASLQKIERSTLTGTNREVVV 2590
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 29/186 (15%)
Query: 242 GLTLDIATRRVYFADSKLDFI-------------DCKSLEIKTNVNYSTIFRKLYWIDEG 288
G+ D V+++D D I LE + + I R LYW D G
Sbjct: 744 GIDFDAQHSTVFYSDLSKDIIYKQKIDGTGKEVITANRLESVECLTFDWISRNLYWTDGG 803
Query: 289 GNGVP-LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
V L++ D S I+ + ++ + G ++F +DW
Sbjct: 804 LKSVTVLRLA----DKSRRQIISNLNNPRSIVVHPTAG-----------YMFLSDWFRPA 848
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+I R DGS+ I++T + WPNGL +D + R+Y+ D+ D I+ DG R+++
Sbjct: 849 KIMRAWSDGSHLMPIVNTSLGWPNGLAIDWSASRLYWVDAFFDKIEHSTLDGLDRKRLGH 908
Query: 408 IDLMVE 413
+D M
Sbjct: 909 VDQMTH 914
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 94/237 (39%), Gaps = 48/237 (20%)
Query: 213 WGENP-RIERIGMDGSNRSTII-STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DGSNR+ + + GL LD +R +Y+ I+ +L+
Sbjct: 1795 WVENPGEIHRVKTDGSNRTVFAPLSLLGSSLGLALDWVSRNIYYTTPASRSIEVLTLKGD 1854
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
T + I +G PL +G +A+D G LY+S
Sbjct: 1855 TRYGKTLI---------ANDGTPLGVG----------------FPVGIAVDPARGKLYWS 1889
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 390
TD G +I MDG++ + + + +TLDI +++Y+A +
Sbjct: 1890 D-------HGTDSGVPAKIASANMDGTSLKILFTGNLQHLEVVTLDIQEQKLYWAVTSRG 1942
Query: 391 FIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I+ N DGT R +IL+ + L + LYYS E E ++
Sbjct: 1943 VIERGNVDGTER--MILVHHLAH------------PWGLVVYGSFLYYSDEQYEVIE 1985
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 129/315 (40%), Gaps = 46/315 (14%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNI-TQPRGMMLDPSPGTRWLFW 210
GL+ D+ IY++D+ L+ IE CD +G N R V+A D + P + L +++W
Sbjct: 1603 GLSIDYPNRLIYFMDAYLDYIEFCDYDGHNRRQVIASDLVLHHPHALTL----FEDFVYW 1658
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
TD G ++ G N+S ++ + ++ P G+T +R+ + C S
Sbjct: 1659 TDRGTRQVMQANKWHGGNQSVVMYS-VHQPLGITAIHPSRQPPSRNP------CASASCS 1711
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS--GQLYEALALDLE----N 324
S + Y +G L N + L+S + ++LD E +
Sbjct: 1712 HLCLLSAQAPRHYSC-ACPSGWNLSDDSVNCVRGDQPFLMSVRDNIIFGISLDPEVKSND 1770
Query: 325 GMLYYSTLKCTRWLFWTD------WGENP-RIERIGMDGSNRSTII-STKIYWPNGLTLD 376
M+ S ++ + + D W ENP I R+ DGSNR+ + + GL LD
Sbjct: 1771 AMVPISGIQHGYDVEFDDSEQFIYWVENPGEIHRVKTDGSNRTVFAPLSLLGSSLGLALD 1830
Query: 377 IATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVP-------ALAL 429
+R +Y+ I+ G R + L+ ++G P +A+
Sbjct: 1831 WVSRNIYYTTPASRSIEVLTLKGDTR-----------YGKTLIANDGTPLGVGFPVGIAV 1879
Query: 430 DLENGMLYYSTEGAE 444
D G LY+S G +
Sbjct: 1880 DPARGKLYWSDHGTD 1894
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 147/412 (35%), Gaps = 113/412 (27%)
Query: 28 CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCS------ 81
C A C H L + P C CP G LS+DSV C +QP S
Sbjct: 1705 CASASCSHLCLLSAQA----PRHYSCACPSGWNLSDDSVNCV---RGDQPFLMSVRDNII 1757
Query: 82 -------QMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK 134
++ +N I GY +E+D+ S F+ +E
Sbjct: 1758 FGISLDPEVKSNDAMVPISGIQHGYDVEFDD--------SEQFIYW----------VENP 1799
Query: 135 GKDHRAQD--------IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--- 183
G+ HR + +S L GLA DW+ +IY+ IEV G R
Sbjct: 1800 GEIHRVKTDGSNRTVFAPLSLLGSSLGLALDWVSRNIYYTTPASRSIEVLTLKGDTRYGK 1859
Query: 184 IVLAKD----NITQPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRSTIIST 235
++A D + P G+ +DP+ G L+W+D G + +I MDG++ + +
Sbjct: 1860 TLIANDGTPLGVGFPVGIAVDPARGK--LYWSDHGTDSGVPAKIASANMDGTSLKILFTG 1917
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
+ +TLDI +++Y+A + I+
Sbjct: 1918 NLQHLEVVTLDIQEQKLYWAVTSRGVIE-------------------------------- 1945
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
+ N+DG+ ILV L L + LYYS + IER+
Sbjct: 1946 --RGNVDGTERMILVH-HLAHPWGLVVYGSFLYYSD------------EQYEVIERVDKS 1990
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
N ++ + + GL RVY + D + C+ + QQ+ L
Sbjct: 1991 SGNNKVVLRDNVPYLRGL-------RVYHRRNAADSSNGCSNNPNACQQICL 2035
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 107/496 (21%), Positives = 174/496 (35%), Gaps = 102/496 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSN-TCHPTPLGA--LCTCPPGEIL 61
C+ + VCD DC +GADE C C + CSN C P+ + CP G
Sbjct: 80 CIPSSWVCDEDKDCSDGADEQQNCAGTTCSAQQMTCSNGQCIPSEYRCDHVSDCPDGSDE 139
Query: 62 SN------DSVTCQD------MNECEQPGYCSQMCTNTKGSYICSCNE-----------G 98
N D +TC + C+Q C + +CS E
Sbjct: 140 RNCHYPTCDQLTCANGACYNTSQRCDQKVDCRDSSDEANCTTLCSQKEFECGSGECILRA 199
Query: 99 YVLEYDN--------HTCKAINHSAAFLIISNRHSI---LVADLEEKGKDHRAQDIVVSG 147
YV ++DN C SN I V D ++ +D +D S
Sbjct: 200 YVCDHDNDCEDNSDERNCNYDTCGGHQFTCSNGQCINQNWVCDGDDDCQDSGDEDGCESN 259
Query: 148 LDLVEGLAYDWI---GGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR--GMMLDPS 202
+W G +D + + C E ++N+T R GM +
Sbjct: 260 QSHHRCYPREWACPGSGRCISIDKVCDGVPDCPEGDD------ENNVTSGRTCGMGV--- 310
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ + T + + P G ++ R + +DF
Sbjct: 311 ----------------CSVLNCEYQCHQTPFGGECFCPPGHIINSNDSR-----TCIDFD 349
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS----------- 311
DC+ I + R +EG + K++ S AS++ S
Sbjct: 350 DCQIWGICDQKCENRQGRHQCLCEEGYILERGQHCKSSDSFSAASVIFSNGRDLLVGDLH 409
Query: 312 GQLYEALALDLENGMLYYSTLKCTRW-LFWTDWGENPRIERI---GMDGSNRSTIISTKI 367
G+ + LA GM+ + +FWTD P E++ ++G N I++ +
Sbjct: 410 GRNFRILAESKNRGMVMGVDFHYQKHRVFWTD----PMQEKVFSTDINGLNTQEILNVSV 465
Query: 368 YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPAL 427
P L +D ++Y ++K++ ID N +G Q+V LI T +L G+
Sbjct: 466 DTPENLAVDWINNKLYLVETKVNRIDVVNLEGN--QRVTLI------TENLGHPRGI--- 514
Query: 428 ALDLENGMLYYSTEGA 443
ALD G L++S G+
Sbjct: 515 ALDPTVGYLFFSDWGS 530
>gi|403259169|ref|XP_003922099.1| PREDICTED: low-density lipoprotein receptor-related protein 2
[Saimiri boliviensis boliviensis]
Length = 4618
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 134/362 (37%), Positives = 186/362 (51%), Gaps = 62/362 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCDG DCPNG DE P C+ C G C++ C P GA C CP G +L+ND
Sbjct: 1287 CVNLSVVCDGTFDCPNGTDESPLCNQNSCSDFNGGCTHECVQEPFGAKCLCPSGFVLAND 1346
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++EC+ PG CSQ C N +GS+ CSC+ GY+LE D TCKA + L++++++
Sbjct: 1347 SKTCEDVDECDIPGSCSQQCYNLRGSFRCSCDTGYLLESDGRTCKAAASESLLLLVASQN 1406
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+ ++ + G D R
Sbjct: 1407 KIIADNITSQVHNMYSLVENGSYIVAIDFDSISGRIFWSDATQGKTWSAFQNGTDRRV-- 1464
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ S + L E +A DW+G ++YW D L IEV +G++R VL N+T PRG+ LDP
Sbjct: 1465 VFDSSIVLTETIAVDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKNLTNPRGLALDPR 1524
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
LFW+DWG +PRIER MDGS RS I+ KI+WP GLT+D R +YF DS LD+I
Sbjct: 1525 INEHLLFWSDWGHHPRIERASMDGSMRSVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYI 1584
Query: 263 D-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM-DGSNASI 308
D L I+ + +YW D ++ +AN G N S+
Sbjct: 1585 DFCDYNGHHRRQVIASDLVIRHPYALTVFEDSVYWTDRATR----RVMQANKWHGGNQSV 1640
Query: 309 LV 310
++
Sbjct: 1641 VM 1642
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 185/385 (48%), Gaps = 78/385 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
RC+ + KVCDG DCP DE G C C C C TP G +C CPPG
Sbjct: 240 RCIPIYKVCDGVLDCPGKEDENSTATGKYCGTTLCSALN--CQYQCRETPYGGVCFCPPG 297
Query: 59 -EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I NDS TC + ++C+ G C Q C + G ++C C EGY+LE H + A
Sbjct: 298 YSINHNDSRTCVEFDDCQIWGICDQRCESRPGHHLCHCEEGYILERGQHCKANDSFGEAS 357
Query: 118 LIISNRHSILVADLEEKG----------------------------------------KD 137
+I SN +L+ D+ + D
Sbjct: 358 VIFSNGRDLLIGDIHGRNFRILMESQNRGVAVGVAFHYHLQRVFWTDTVQNKVFSLDIND 417
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
Q+++ +D E LA DW+ +Y +++++NRI++ + +G+ R+ L +N+ PRG+
Sbjct: 418 LNIQEVLNISVDTPENLAVDWVNNKLYLVETKVNRIDMVNLDGSYRVTLITENLGNPRGI 477
Query: 198 MLDPSPGTRWLFWTDW----GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
+DP+ G +LF++DW GE P++ER MDGSNR ++ TK+ WP G+TLD+ ++RVY
Sbjct: 478 AVDPTVG--YLFFSDWESLSGE-PKLERAFMDGSNRKDLVKTKLGWPAGITLDLISKRVY 534
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG-------SNA 306
+ DS+ D+I+ V Y I RK + GG+ +P G + +G +
Sbjct: 535 WVDSRFDYIE--------TVTYDGIQRKT--VVHGGSLIPHPFGISLFEGQVFFTDWTKM 584
Query: 307 SILVSGQLYEALALDLENGMLYYST 331
++L + + E N +YY T
Sbjct: 585 AVLKANKFTET------NPQVYYQT 603
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 183/410 (44%), Gaps = 96/410 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ + K+C+ DC + +DE GC + EC++ C + C T C+C PG L
Sbjct: 3048 RCIEMMKLCNHLDDCLDNSDE-KGCGINECQNPSISGCDHNCTDTLTSFYCSCRPGYKLM 3106
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P CSQ C N GSYIC C GY+ E D TC+ ++ +LI S
Sbjct: 3107 SDKRTCVDIDECTETPFVCSQKCENVIGSYICKCAPGYLREPDGKTCRQNSNIEPYLIFS 3166
Query: 122 NRH--------------------SILVADLEEKGK------DHRA------------QDI 143
NR+ +++ D + K HR + I
Sbjct: 3167 NRYYLRNLTVDGYFYSLILEGLGNVVALDFDRVEKRLYWIDTHRQVIERMFLNKTNKETI 3226
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT--------QPR 195
+ L E LA DW+ +YWLD+ L+ + V D NG +R +LA+ + PR
Sbjct: 3227 ISHRLPAAESLAVDWVSRKLYWLDAHLDSLFVSDLNGKHRRMLAQHCVDANNTFCFDNPR 3286
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G++L P G +++W DWG I R+GMDG+N+S IISTK+ WPNG+T
Sbjct: 3287 GIVLHPQYG--YIYWADWGHRAYIGRVGMDGANKSVIISTKLEWPNGIT----------- 3333
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
++Y+ LYW D I ++++G N + G L
Sbjct: 3334 -----------------IDYTNDL--LYWADAHLG----YIEYSDLEGRNRHTVYDGTLP 3370
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ + +Y WTDW + DGS R T+++T
Sbjct: 3371 HPFAITIFEDTIY-----------WTDWNTRTVEKGNKYDGSKRQTLVNT 3409
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 143/320 (44%), Gaps = 63/320 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLA-ECKHKFGLCSNTCHPTPLGA-LCTCPPG-EI 60
C+ VCD DC + +DE GC++ E +C C G +C+C G E
Sbjct: 3901 HCIPHDSVCDDADDCGDLSDE-LGCNIGKERTCAENICEQNCTQLNEGGFICSCTAGFET 3959
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN--HTCKAINHSAAFL 118
D +C D+NECEQ G CSQ C NTKGSY C C +G+ D C A S L
Sbjct: 3960 SVFDRTSCLDINECEQFGICSQHCRNTKGSYECVCADGFTSMSDRLGKRCAAEGSSPLLL 4019
Query: 119 I-------------------ISNRHSILVADLE--------------------------- 132
+ + + I D +
Sbjct: 4020 LPDNVRIRKYNLSSESFSEYLQDEEYIQAVDYDWDPEDTGLSVVYYTVRGEGSRFGAIKR 4079
Query: 133 ------EKGKDHRAQ--DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
E G+++ Q D+ + + +G+A DW+G HIYW D + RIEV +G R
Sbjct: 4080 AYIPNFESGRNNPVQEVDLKLKYVMQPDGIAVDWVGRHIYWSDVKNKRIEVAKLDGRYRK 4139
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L ++ QP + ++P G +FWTDWG+ P+IE M+G +R+ ++ + WP GL+
Sbjct: 4140 WLISTDLDQPTAVAVNPKLGL--MFWTDWGKEPKIESAWMNGESRNVLVFGNLGWPTGLS 4197
Query: 245 LD-IATRRVYFADSKLDFID 263
+D + R+Y++D K D I+
Sbjct: 4198 IDYLNNDRIYWSDFKEDVIE 4217
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 114/252 (45%), Gaps = 37/252 (14%)
Query: 33 CKHKFGLCSNTCHPTPLGAL-CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
C + C C P P G C C G L+ D+ +C N S +
Sbjct: 1984 CSNNMNACQQICLPIPGGLFSCACATGFKLNPDNRSCSPYNSFIVVSMLSAI-------- 2035
Query: 92 ICSCNEGYVLEYDNHTCKAI--------------NHSAAFLIISNRHSILVAD---LEEK 134
G+ LE +H+ + + S+ F+ + S + +D K
Sbjct: 2036 -----RGFSLELSDHSETMVPVAGQGRNALHVDVDMSSGFIYWCDFSSSVTSDNAIRRIK 2090
Query: 135 GKDHRAQDIVVSGL--DLVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDN 190
+IV G+ + V G+A DW+ G+IY+ ++ ++ IEV N T R VL K
Sbjct: 2091 PDGSSLMNIVTQGIGENGVRGIAVDWVAGNIYFTNAFVSETLIEVLRINTTYRRVLLKAT 2150
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ PR +++DP R+LFW D+G+ P+IER +D +NR+ ++S I P GL +D +
Sbjct: 2151 VDMPRHIVVDPK--NRYLFWADYGQRPKIERSALDCTNRTVLVSEGIVTPRGLAVDRSNG 2208
Query: 251 RVYFADSKLDFI 262
VY+ D LD I
Sbjct: 2209 YVYWVDDSLDII 2220
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 103/191 (53%), Gaps = 19/191 (9%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ SG+ + +G+A+DWI IY+ D I E+G+NR V+A+ +++PR ++LDP
Sbjct: 2422 VIASGIGIADGIAFDWITRRIYYSDYLNQTINSMAEDGSNRTVIAR--VSKPRSIVLDPC 2479
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W DW + +IER + G+ R I+++ + P+GLTLD +Y+ D L I
Sbjct: 2480 QG--YLYWADWDMHAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDPSLQRI 2537
Query: 263 DCKSL-----EIKTNVNYS----TIF-RKLYWIDEGGNGVPLKIGKAN-MDGSNASILVS 311
+ +L E+ N T++ + +YW D +I +AN DGS + +
Sbjct: 2538 ERSTLTGMDREVIVNAAVHAFGLTLYGQHIYWTDL----YTQRIYRANKYDGSGQIAITT 2593
Query: 312 GQLYEALALDL 322
L++ +++
Sbjct: 2594 DLLFQPRGINI 2604
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 109/454 (24%), Positives = 180/454 (39%), Gaps = 100/454 (22%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT-----CPP 57
+RC+ ++C+G +C +G DE C+ PTP CT C
Sbjct: 3856 NRCIYGHELCNGVDNCGDGTDETE----EHCRK----------PTP--KPCTEYEYKCGN 3899
Query: 58 GEILSNDSVTCQDMNECEQ----------------PGYCSQMCTN-TKGSYICSCNEGYV 100
G + +DSV C D ++C C Q CT +G +ICSC G+
Sbjct: 3900 GHCIPHDSV-CDDADDCGDLSDELGCNIGKERTCAENICEQNCTQLNEGGFICSCTAGFE 3958
Query: 101 LE-YDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWI 159
+D +C IN F I S E D
Sbjct: 3959 TSVFDRTSCLDINECEQFGICSQHCRNTKGSYECVCADGFTS------------------ 4000
Query: 160 GGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRI 219
+ RL + C G++ ++L DN+ + R L + +L + I
Sbjct: 4001 ------MSDRLGK--RCAAEGSSPLLLLPDNV-RIRKYNLSSESFSEYL-----QDEEYI 4046
Query: 220 ERIGMDGSNRSTIISTKIYWPNGLTLDI-ATRRVY---FADSKLDFIDCKSLEIK----- 270
+ + D T +S Y G A +R Y F + + + L++K
Sbjct: 4047 QAVDYDWDPEDTGLSVVYYTVRGEGSRFGAIKRAYIPNFESGRNNPVQEVDLKLKYVMQP 4106
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLY 328
+ + R +YW D +I A +DG L+S L + A+A++ + G++
Sbjct: 4107 DGIAVDWVGRHIYWSDVKNK----RIEVAKLDGRYRKWLISTDLDQPTAVAVNPKLGLM- 4161
Query: 329 YSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADS 387
FWTDWG+ P+IE M+G +R+ ++ + WP GL++D + R+Y++D
Sbjct: 4162 ----------FWTDWGKEPKIESAWMNGESRNVLVFGNLGWPTGLSIDYLNNDRIYWSDF 4211
Query: 388 KLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
K D I+ +DGT R +VI + M ++ D+ D
Sbjct: 4212 KEDVIETVKFDGTDR-RVIAKEAMHPYSLDIFED 4244
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 20/213 (9%)
Query: 114 SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI 173
S F ++H I ++ G++ A + V + VE LA+DWI ++YW DS I
Sbjct: 715 STIFFSDMSKHMIFKQKIDGTGREILAANRVEN----VESLAFDWISKNLYWTDSHYKSI 770
Query: 174 EVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
V R + + + PR +++ P G +LF+TDW +I R DGS+ I+
Sbjct: 771 SVMGLADKMRRTVVQ-YLNNPRSVVIHPLAG--YLFFTDWFRPAKIMRAWSDGSHLLPIV 827
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKS-----------LEIKTNVNYSTIFRKL 282
+T + WPN L +D A R+Y+ D+ D I+ + +E T+ T+F +
Sbjct: 828 NTTLGWPNALAIDWAASRLYWIDAYFDKIEHSTFDGLDRRRLGHIEQMTHPFGLTVFGEH 887
Query: 283 YWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ + G +++ KA DG +++ SG Y
Sbjct: 888 LFFTDWRLGAIIRVRKA--DGGGMTVIRSGIAY 918
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 121/316 (38%), Gaps = 89/316 (28%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH 138
C Q+C G + C+C G+ L DN +C N +F+++S +I LE
Sbjct: 1991 CQQICLPIPGGLFSCACATGFKLNPDNRSCSPYN---SFIVVSMLSAIRGFSLELSDHSE 2047
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
+ G + + + D G IYW D
Sbjct: 2048 TMVPVAGQGRNALH-VDVDMSSGFIYWCD------------------------------- 2075
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI--YWPNGLTLDIATRRVYFAD 256
F + + I RI DGS+ I++ I G+ +D +YF +
Sbjct: 2076 ----------FSSSVTSDNAIRRIKPDGSSLMNIVTQGIGENGVRGIAVDWVAGNIYFTN 2125
Query: 257 SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE 316
+ F+ +E+ + +T +R++ + KA +D +
Sbjct: 2126 A---FVSETLIEV---LRINTTYRRV-------------LLKATVD-----------MPR 2155
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 376
+ +D +N R+LFW D+G+ P+IER +D +NR+ ++S I P GL +D
Sbjct: 2156 HIVVDPKN-----------RYLFWADYGQRPKIERSALDCTNRTVLVSEGIVTPRGLAVD 2204
Query: 377 IATRRVYFADSKLDFI 392
+ VY+ D LD I
Sbjct: 2205 RSNGYVYWVDDSLDII 2220
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
+LF+TDW +I R DGS+ I++T + WPN L +D A R+Y+ D+ D I+
Sbjct: 801 YLFFTDWFRPAKIMRAWSDGSHLLPIVNTTLGWPNALAIDWAASRLYWIDAYFDKIEHST 860
Query: 397 YDGTGRQQVILIDLMVE 413
+DG R+++ I+ M
Sbjct: 861 FDGLDRRRLGHIEQMTH 877
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 76/181 (41%), Gaps = 45/181 (24%)
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
G + T+I++ I +G+ D TRR+Y++D ++
Sbjct: 2416 GIHTPTVIASGIGIADGIAFDWITRRIYYSD---------------------------YL 2448
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
++ I DGSN +++ ++ LD C +L+W DW
Sbjct: 2449 NQ-------TINSMAEDGSNRTVIARVSKPRSIVLD-----------PCQGYLYWADWDM 2490
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+ +IER + G+ R I+++ + P+GLTLD +Y+ D L I+ G R+ +
Sbjct: 2491 HAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDPSLQRIERSTLTGMDREVI 2550
Query: 406 I 406
+
Sbjct: 2551 V 2551
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 143/383 (37%), Gaps = 105/383 (27%)
Query: 71 MNECEQPGYCSQMCT-NTKGSYI--CSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL 127
MN C CS +C +++G Y C+C G+ L D C + FLI +H I
Sbjct: 1663 MNPCAF-ARCSHLCLLSSQGPYFYSCACPSGWSLSSDLMNC--LRDEQPFLITVRQHIIF 1719
Query: 128 VADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
L + K + A + ++G+ + +D +IY
Sbjct: 1720 GISLNPEVKSNDAM-VPIAGIQNGLDVEFDDSEQYIY----------------------- 1755
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPN-GLTL 245
W ENP I R+ DG+NR+ S + + L L
Sbjct: 1756 -------------------------WVENPGEIHRVKTDGTNRTVFASLSMVGSSMNLAL 1790
Query: 246 DIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN-GVPLKIGKANMDGS 304
D +R +Y + + +S+E+ T ++ +RK ++G GV L IG
Sbjct: 1791 DWISRNLYSTNPRT-----QSIEVLT-LHGDIRYRKTLITNDGTALGVGLPIG------- 1837
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+ +D G LY+S TD G +I MDG++ TI +
Sbjct: 1838 -------------ITVDPVRGKLYWSDQG-------TDSGIPAKIASANMDGTSIKTIFT 1877
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGV 424
+ +TLD +++Y+A + I+ N DGTGR VIL+ +
Sbjct: 1878 GNLEHLECVTLDTEEQKLYWAVAGRGVIERGNVDGTGR--VILVHELSH----------- 1924
Query: 425 PALALDLENGMLYYSTEGAEFLK 447
L + LYYS E E ++
Sbjct: 1925 -PWGLAVYGSFLYYSDEQYEAIE 1946
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 108/487 (22%), Positives = 182/487 (37%), Gaps = 113/487 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADE-----------GPG---CDLAECKHKFGLCS--NTC---- 44
C+ CDG DC +G+DE P CD C + LC+ + C
Sbjct: 3816 CIPQYWKCDGDNDCGDGSDEELHQCLNIPCNSPDRFRCDNNRCIYGHELCNGVDNCGDGT 3875
Query: 45 --------HPTPLGALCT-----CPPGEILSNDSVTCQDMNECEQ--------------- 76
PTP CT C G + +DSV C D ++C
Sbjct: 3876 DETEEHCRKPTP--KPCTEYEYKCGNGHCIPHDSV-CDDADDCGDLSDELGCNIGKERTC 3932
Query: 77 -PGYCSQMCTN-TKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIISNR-------HSI 126
C Q CT +G +ICSC G+ +D +C IN F I S +
Sbjct: 3933 AENICEQNCTQLNEGGFICSCTAGFETSVFDRTSCLDINECEQFGICSQHCRNTKGSYEC 3992
Query: 127 LVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL 186
+ AD D + G + L + R+ + + E+ + L
Sbjct: 3993 VCADGFTSMSDRLGKRCAAEGSSPLLLLPD----------NVRIRKYNLSSESFSE--YL 4040
Query: 187 AKDNITQPRGMMLDPS-PGTRWLFWTDWGENPRIERI----------GMDGSNRSTIIST 235
+ Q DP G +++T GE R I G + + +
Sbjct: 4041 QDEEYIQAVDYDWDPEDTGLSVVYYTVRGEGSRFGAIKRAYIPNFESGRNNPVQEVDLKL 4100
Query: 236 K-IYWPNGLTLDIATRRVYFADSKLDFIDCKSLE-------IKTNVNYSTIFRK------ 281
K + P+G+ +D R +Y++D K I+ L+ I T+++ T
Sbjct: 4101 KYVMQPDGIAVDWVGRHIYWSDVKNKRIEVAKLDGRYRKWLISTDLDQPTAVAVNPKLGL 4160
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
++W D G KI A M+G + ++LV G L L ++ Y + + ++W+
Sbjct: 4161 MFWTDWGKEP---KIESAWMNGESRNVLVFGNLGWPTGLSID----YLNNDR----IYWS 4209
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+ E+ IE + DG++R I ++ +LDI ++Y+ + + N G G
Sbjct: 4210 DFKED-VIETVKFDGTDRRVIAKEAMH---PYSLDIFEDQLYWIAKEKGEVWKQNKFGQG 4265
Query: 402 RQQVILI 408
+++ L+
Sbjct: 4266 KKEKTLV 4272
>gi|149022164|gb|EDL79058.1| rCG26871, isoform CRA_c [Rattus norvegicus]
Length = 4369
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 167/301 (55%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+NL+ +CDG DCPNG DE P C+ C H G C++ C P GA C CP G L+ND
Sbjct: 1326 CINLSALCDGVFDCPNGTDESPLCNQDSCSHFNGGCTHQCMQGPFGATCLCPLGYQLAND 1385
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
+ TC+D+NEC+ PG+CSQ C N +GS+ C+C+ Y LE D TCK L++++R
Sbjct: 1386 TKTCEDINECDIPGFCSQHCVNMRGSFRCACDPEYTLESDGRTCKVTGSENPLLVVASRD 1445
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+V ++ + G D R
Sbjct: 1446 KIIVDNITAHTHNLYSLVQDVSFVVALDFDSVTGRVFWSDLLQGKTWSVFQNGTDKRV-- 1503
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ SGL + E +A DWIG ++YW D L IEV +G++R VL N+T+PRG+ LDP
Sbjct: 1504 VHDSGLSVTEMIAVDWIGRNLYWTDYALETIEVSKIDGSHRTVLISKNVTKPRGLALDPR 1563
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +FW+DWG +PRIER MDG+ R+ I+ KIYWP GL++D R +YF D+ LD+I
Sbjct: 1564 MGDNVMFWSDWGHHPRIERASMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYI 1623
Query: 263 D 263
+
Sbjct: 1624 E 1624
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/343 (36%), Positives = 178/343 (51%), Gaps = 63/343 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
RC+++ KVCDG DCP G DE G C + C C CH TP G C CPPG
Sbjct: 277 RCISIDKVCDGVPDCPEGDDENNVTSGRTCGMGVCS--VLNCEYQCHQTPFGGECFCPPG 334
Query: 59 EIL-SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I+ SNDS TC D ++C+ G C Q C N +G + C C EGY+LE H + + SAA
Sbjct: 335 HIINSNDSRTCIDFDDCQIWGICDQKCENRQGRHQCLCEEGYILERGQHCKSSDSFSAAS 394
Query: 118 LIISNRHSILVADLEEKG--------------------KDHRA----------------- 140
+I SN +LV DL + + HR
Sbjct: 395 VIFSNGRDLLVGDLHGRNFRILAESKNRGMVMGVDFHYQKHRVFWTDPMQEKVFSTDING 454
Query: 141 ---QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
Q+I+ +D E LA DWI +Y +++++NRI+V + G R+ L +N+ PRG+
Sbjct: 455 LNTQEILNVSVDTPENLAVDWINNKLYLVETKVNRIDVVNLEGNQRVTLITENLGHPRGI 514
Query: 198 MLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
LDP+ G +LF++DWG P++ER MDGSNR +++TK+ WP G+TLD+ ++RVY+
Sbjct: 515 ALDPTVG--YLFFSDWGSLSGQPKVERAFMDGSNRKDLVTTKVGWPAGITLDLVSKRVYW 572
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
DS+ D+I+ V Y I RK + GG+ VP G
Sbjct: 573 VDSRYDYIE--------TVTYDGIQRKT--VARGGSLVPHPFG 605
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 168/364 (46%), Gaps = 55/364 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + +VC+ DC + +DE GC + EC C + C T C+C PG L
Sbjct: 3088 HCIEMGRVCNHVDDCSDNSDE-KGCGINECLDSSISRCDHNCTDTITSFYCSCLPGYKLM 3146
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D +C D++EC E P CSQ C N GSYIC C GY+ E D +C+ ++ +LI S
Sbjct: 3147 SDKRSCVDIDECKESPQLCSQKCENVVGSYICKCAPGYIREPDGKSCRQNSNIEPYLIFS 3206
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
NR+ I D + +++ GL V L +D + +YW+D+ IE N T
Sbjct: 3207 NRYYI-----RNLTTDGSSYSLILQGLGNVVALDFDRVEKRLYWIDAEKQIIERMFLNKT 3261
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
NR + + + + +D +R ++W DWG + I RIGMDG+N+S IISTKI WPN
Sbjct: 3262 NRETIINHRLRRAESLAVDWV--SRHVYWADWGVHAYIGRIGMDGTNKSVIISTKIEWPN 3319
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+T+D +Y+AD+ L +I+ LE
Sbjct: 3320 AITIDYTNDLLYWADAHLGYIEFSDLE--------------------------------- 3346
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
G + + G L AL ++ T +FWTDW + DGS R
Sbjct: 3347 -GHHRHTVYDGSLPHPFAL-----TIFEDT------VFWTDWNTRTVEKGNKYDGSGRVV 3394
Query: 362 IIST 365
+++T
Sbjct: 3395 LVNT 3398
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 100/186 (53%), Gaps = 13/186 (6%)
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
++ +++W + L T V+ + + L + + I R LYW D +
Sbjct: 1477 VTGRVFWSD--LLQGKTWSVFQNGTDKRVVHDSGLSVTEMIAVDWIGRNLYWTDYALETI 1534
Query: 293 PLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+ + +DGS+ ++L+S + + L L+ M +FW+DWG +PRIER
Sbjct: 1535 EV----SKIDGSHRTVLISKNVTKPRGLALDPRMG-------DNVMFWSDWGHHPRIERA 1583
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
MDG+ R+ I+ KIYWP GL++D R +YF D+ LD+I+FC+YDG R+QVI DL++
Sbjct: 1584 SMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYIEFCDYDGHNRRQVIASDLVL 1643
Query: 413 EFTNDL 418
+ L
Sbjct: 1644 HHPHAL 1649
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 122/255 (47%), Gaps = 50/255 (19%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+++S + + +G+A+DWI IY+ D I E+G+NR V+A+ +++PR ++LDP
Sbjct: 2461 VLLSNIGVTDGIAFDWINRRIYYSDFSNQTINSMAEDGSNRAVIAR--VSKPRAIVLDPC 2518
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWG N +IER + G+ R I++T + WPNGL LD+ T +Y+AD+ L
Sbjct: 2519 RG--YMYWTDWGTNAKIERATLGGNFRVPIVNTSLVWPNGLALDLETDLLYWADASLQ-- 2574
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
KI ++ + G+N ++VS +
Sbjct: 2575 --------------------------------KIERSTLTGTNREVVVSTAFHSF----- 2597
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G+ Y ++++WTD DGS+ + + P+G++ + T+R
Sbjct: 2598 --GLTVYG-----QYIYWTDLYTRKIYRANKYDGSDLVAMTTRLPTQPSGISTVVKTQRQ 2650
Query: 383 YFADSKLDFIDFCNY 397
++ F C++
Sbjct: 2651 QCSNPCDQFNGGCSH 2665
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 97/177 (54%), Gaps = 15/177 (8%)
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
R D+ + L +GLA DW+G HIYW D++ RIEV +G R L + QP +
Sbjct: 4083 REVDLGLKYLMQPDGLAVDWVGRHIYWSDAKSQRIEVATLDGRYRKWLITTQLDQPAAIA 4142
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADS 257
++P G +FWTD G+ P+IE M+G +RS ++S + WPNGL++D + RVY++DS
Sbjct: 4143 VNPKLGL--MFWTDQGKQPKIESAWMNGEHRSVLVSENLGWPNGLSIDYLNDDRVYWSDS 4200
Query: 258 KLDFIDC-------KSLEIKTNVNYST--IFR-KLYWI--DEGGNGVPLKIGKANMD 302
K D I+ + L I + + IF KLYW+ ++G K GK N +
Sbjct: 4201 KEDVIEAIKYDGTDRRLIINEAMKPFSLDIFEDKLYWVAKEKGEVWRQNKFGKENKE 4257
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 57/238 (23%)
Query: 77 PGYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NR 123
P C Q+C G + C+C G+ L D +C N +F+++S +
Sbjct: 2027 PNACQQICLPVPGGMFSCACASGFKLSPDGRSCSPYN---SFMVVSMLPAVRGFSLELSD 2083
Query: 124 HSILVADLEEKGKDHRAQDIVVS------------------------------------- 146
HS + + +G++ D+ V+
Sbjct: 2084 HSEAMVPVAGQGRNVLHADVDVANGFIYWCDFSSSVRSSNGIRRIKPDGSNFTNVVTYGI 2143
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
G + + G+A DW G++Y+ ++ + IEV N T R VL K ++ PR +++DP
Sbjct: 2144 GANGIRGVALDWAAGNLYFTNAFVYETLIEVLRINTTYRRVLLKVSVDMPRHIIVDPK-- 2201
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
R+LFW D+G+ P+IER +D +NR+ ++S I P GL +D T +Y+ D LD I
Sbjct: 2202 HRYLFWADYGQKPKIERSFLDCTNRTVLVSEGIVTPRGLAMDHDTGYIYWVDDSLDLI 2259
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 140/314 (44%), Gaps = 67/314 (21%)
Query: 78 GYCSQMCT------NTKGSYICSCNEGYVLEYDNHTCKAINH------------------ 113
G C+Q+C N Y C C G+ L+ D H C A+ +
Sbjct: 667 GGCAQVCVLSHRTDNGGLGYRCKCEFGFELDDDEHRCVAVKNFLLFSSKTAVRGIPFTLS 726
Query: 114 -----------SAAFLI---ISNRHS-ILVADLEE-----KGKDHRAQDIVVSG-LDLVE 152
S +F + +HS + +DL + + D ++++ + L+ VE
Sbjct: 727 TQEDVMVPVTGSPSFFVGIDFDAQHSTVFYSDLSKDIIYKQKIDGTGKEVITANRLESVE 786
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
L +DWI ++YW D L + V + + R +++ N+ PR +++ P+ G ++F +
Sbjct: 787 CLTFDWISRNLYWTDGGLKSVTVLRLADKSRRQIIS--NLNNPRSIVVHPTAG--YMFLS 842
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKLDFID 263
DW +I R DGS+ I++T + WPNGL +D + R+Y+ D S LD +D
Sbjct: 843 DWFRPAKIMRAWSDGSHLMPIVNTSLGWPNGLAIDWSASRLYWVDAFFDKIEHSTLDGLD 902
Query: 264 CKSLEIKTNVNYS---TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG----QLYE 316
K L + + T+F+ +I + G +++ K+ DG + +++ G +
Sbjct: 903 RKRLGHVDQMTHPFGLTVFKDNVFITDWRLGAIIRVRKS--DGGDMTVIRRGISSVMHVK 960
Query: 317 ALALDLENGMLYYS 330
A DL+ G Y S
Sbjct: 961 AYDADLQTGSNYCS 974
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 76/133 (57%), Gaps = 13/133 (9%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+++ + ++LYWID I + ++ +N +++ +L A +L ++
Sbjct: 3234 LDFDRVEKRLYWID----AEKQIIERMFLNKTNRETIINHRLRRAESLAVD--------- 3280
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
+R ++W DWG + I RIGMDG+N+S IISTKI WPN +T+D +Y+AD+ L +I
Sbjct: 3281 WVSRHVYWADWGVHAYIGRIGMDGTNKSVIISTKIEWPNAITIDYTNDLLYWADAHLGYI 3340
Query: 393 DFCNYDGTGRQQV 405
+F + +G R V
Sbjct: 3341 EFSDLEGHHRHTV 3353
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 83/147 (56%), Gaps = 19/147 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ R +YW D +I A +DG L++ QL + A+A++ + G++
Sbjct: 4103 VGRHIYWSDAKSQ----RIEVATLDGRYRKWLITTQLDQPAAIAVNPKLGLM-------- 4150
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDF 394
FWTD G+ P+IE M+G +RS ++S + WPNGL++D + RVY++DSK D I+
Sbjct: 4151 ---FWTDQGKQPKIESAWMNGEHRSVLVSENLGWPNGLSIDYLNDDRVYWSDSKEDVIEA 4207
Query: 395 CNYDGTGRQQVILIDLMVEFTNDLMGD 421
YDGT R ++I+ + M F+ D+ D
Sbjct: 4208 IKYDGTDR-RLIINEAMKPFSLDIFED 4233
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 15/142 (10%)
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
++ + + + I R++Y+ D I DGSN +++ A+ LD
Sbjct: 2464 SNIGVTDGIAFDWINRRIYYSDFSNQ----TINSMAEDGSNRAVIARVSKPRAIVLD--- 2516
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384
C +++WTDWG N +IER + G+ R I++T + WPNGL LD+ T +Y+
Sbjct: 2517 --------PCRGYMYWTDWGTNAKIERATLGGNFRVPIVNTSLVWPNGLALDLETDLLYW 2568
Query: 385 ADSKLDFIDFCNYDGTGRQQVI 406
AD+ L I+ GT R+ V+
Sbjct: 2569 ADASLQKIERSTLTGTNREVVV 2590
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 29/186 (15%)
Query: 242 GLTLDIATRRVYFADSKLDFI-------------DCKSLEIKTNVNYSTIFRKLYWIDEG 288
G+ D V+++D D I LE + + I R LYW D G
Sbjct: 744 GIDFDAQHSTVFYSDLSKDIIYKQKIDGTGKEVITANRLESVECLTFDWISRNLYWTDGG 803
Query: 289 GNGVP-LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
V L++ D S I+ + L+ ++ + T ++F +DW
Sbjct: 804 LKSVTVLRLA----DKSRRQIISN--------LNNPRSIVVHPTAG---YMFLSDWFRPA 848
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+I R DGS+ I++T + WPNGL +D + R+Y+ D+ D I+ DG R+++
Sbjct: 849 KIMRAWSDGSHLMPIVNTSLGWPNGLAIDWSASRLYWVDAFFDKIEHSTLDGLDRKRLGH 908
Query: 408 IDLMVE 413
+D M
Sbjct: 909 VDQMTH 914
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 94/237 (39%), Gaps = 48/237 (20%)
Query: 213 WGENP-RIERIGMDGSNRSTII-STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DGSNR+ + + GL LD +R +Y+ I+ +L+
Sbjct: 1795 WVENPGEIHRVKTDGSNRTVFAPLSLLGSSLGLALDWVSRNIYYTTPASRSIEVLTLKGD 1854
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
T + I +G PL +G +A+D G LY+S
Sbjct: 1855 TRYGKTLI---------ANDGTPLGVG----------------FPVGIAVDPARGKLYWS 1889
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 390
TD G +I MDG++ + + + +TLDI +++Y+A +
Sbjct: 1890 D-------HGTDSGVPAKIASANMDGTSLKILFTGNLQHLEVVTLDIQEQKLYWAVTSRG 1942
Query: 391 FIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I+ N DGT R +IL+ + L + LYYS E E ++
Sbjct: 1943 VIERGNVDGTER--MILVHHLAH------------PWGLVVYGSFLYYSDEQYEVIE 1985
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 129/315 (40%), Gaps = 46/315 (14%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNI-TQPRGMMLDPSPGTRWLFW 210
GL+ D+ IY++D+ L+ IE CD +G N R V+A D + P + L +++W
Sbjct: 1603 GLSIDYPNRLIYFMDAYLDYIEFCDYDGHNRRQVIASDLVLHHPHALTL----FEDFVYW 1658
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
TD G ++ G N+S ++ + ++ P G+T +R+ + C S
Sbjct: 1659 TDRGTRQVMQANKWHGGNQSVVMYS-VHQPLGITAIHPSRQPPSRNP------CASASCS 1711
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS--GQLYEALALDLE----N 324
S + Y +G L N + L+S + ++LD E +
Sbjct: 1712 HLCLLSAQAPRHYSC-ACPSGWNLSDDSVNCVRGDQPFLMSVRDNIIFGISLDPEVKSND 1770
Query: 325 GMLYYSTLKCTRWLFWTD------WGENP-RIERIGMDGSNRSTII-STKIYWPNGLTLD 376
M+ S ++ + + D W ENP I R+ DGSNR+ + + GL LD
Sbjct: 1771 AMVPISGIQHGYDVEFDDSEQFIYWVENPGEIHRVKTDGSNRTVFAPLSLLGSSLGLALD 1830
Query: 377 IATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVP-------ALAL 429
+R +Y+ I+ G R + L+ ++G P +A+
Sbjct: 1831 WVSRNIYYTTPASRSIEVLTLKGDTR-----------YGKTLIANDGTPLGVGFPVGIAV 1879
Query: 430 DLENGMLYYSTEGAE 444
D G LY+S G +
Sbjct: 1880 DPARGKLYWSDHGTD 1894
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 147/412 (35%), Gaps = 113/412 (27%)
Query: 28 CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCS------ 81
C A C H L + P C CP G LS+DSV C +QP S
Sbjct: 1705 CASASCSHLCLLSAQA----PRHYSCACPSGWNLSDDSVNCVRG---DQPFLMSVRDNII 1757
Query: 82 -------QMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK 134
++ +N I GY +E+D+ S F+ +E
Sbjct: 1758 FGISLDPEVKSNDAMVPISGIQHGYDVEFDD--------SEQFIYW----------VENP 1799
Query: 135 GKDHRAQD--------IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--- 183
G+ HR + +S L GLA DW+ +IY+ IEV G R
Sbjct: 1800 GEIHRVKTDGSNRTVFAPLSLLGSSLGLALDWVSRNIYYTTPASRSIEVLTLKGDTRYGK 1859
Query: 184 IVLAKD----NITQPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRSTIIST 235
++A D + P G+ +DP+ G L+W+D G + +I MDG++ + +
Sbjct: 1860 TLIANDGTPLGVGFPVGIAVDPARGK--LYWSDHGTDSGVPAKIASANMDGTSLKILFTG 1917
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
+ +TLDI +++Y+A + I+
Sbjct: 1918 NLQHLEVVTLDIQEQKLYWAVTSRGVIE-------------------------------- 1945
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
+ N+DG+ ILV L L + LYYS + IER+
Sbjct: 1946 --RGNVDGTERMILVH-HLAHPWGLVVYGSFLYYSD------------EQYEVIERVDKS 1990
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
N ++ + + GL RVY + D + C+ + QQ+ L
Sbjct: 1991 SGNNKVVLRDNVPYLRGL-------RVYHRRNAADSSNGCSNNPNACQQICL 2035
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 108/500 (21%), Positives = 176/500 (35%), Gaps = 110/500 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSN-TCHPTPLGA--LCTCPPGEIL 61
C+ + VCD DC +GADE C C + CSN C P+ + CP G
Sbjct: 80 CIPSSWVCDEDKDCSDGADEQQNCAGTTCSAQQMTCSNGQCIPSEYRCDHVSDCPDGSDE 139
Query: 62 SN------DSVTCQD------MNECEQPGYCSQMCTNTKGSYICSCNE-----------G 98
N D +TC + C+Q C + +CS E
Sbjct: 140 RNCHYPTCDQLTCANGACYNTSQRCDQKVDCRDSSDEANCTTLCSQKEFECGSGECILRA 199
Query: 99 YVLEYDN--------HTCKAINHSAAFLIISNRHSI---LVADLEEKGKDHRAQDIVVSG 147
YV ++DN C SN I V D ++ +D +D S
Sbjct: 200 YVCDHDNDCEDNSDERNCNYDTCGGHQFTCSNGQCINQNWVCDGDDDCQDSGDEDGCESN 259
Query: 148 LDLVEGLAYDWI---GGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR--GMMLDPS 202
+W G +D + + C E ++N+T R GM +
Sbjct: 260 QSHHRCYPREWACPGSGRCISIDKVCDGVPDCPEGDD------ENNVTSGRTCGMGV--- 310
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ + T + + P G ++ R + +DF
Sbjct: 311 ----------------CSVLNCEYQCHQTPFGGECFCPPGHIINSNDSR-----TCIDFD 349
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS----------- 311
DC+ I + R +EG + K++ S AS++ S
Sbjct: 350 DCQIWGICDQKCENRQGRHQCLCEEGYILERGQHCKSSDSFSAASVIFSNGRDLLVGDLH 409
Query: 312 GQLYEALALDLENGML-----YYSTLKCTRWLFWTDWGENPRIERI---GMDGSNRSTII 363
G+ + LA GM+ +Y + +FWTD P E++ ++G N I+
Sbjct: 410 GRNFRILAESKNRGMVMGVDFHYQKHR----VFWTD----PMQEKVFSTDINGLNTQEIL 461
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNG 423
+ + P L +D ++Y ++K++ ID N +G Q+V LI T +L G
Sbjct: 462 NVSVDTPENLAVDWINNKLYLVETKVNRIDVVNLEGN--QRVTLI------TENLGHPRG 513
Query: 424 VPALALDLENGMLYYSTEGA 443
+ ALD G L++S G+
Sbjct: 514 I---ALDPTVGYLFFSDWGS 530
>gi|124487372|ref|NP_001074557.1| low-density lipoprotein receptor-related protein 2 precursor [Mus
musculus]
gi|160409939|sp|A2ARV4.1|LRP2_MOUSE RecName: Full=Low-density lipoprotein receptor-related protein 2;
Short=LRP-2; AltName: Full=Glycoprotein 330; Short=gp330;
AltName: Full=Megalin; Flags: Precursor
Length = 4660
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/301 (41%), Positives = 167/301 (55%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ +CDG DCPNG DE P C+ C H G C++ C P GA C CP G L+ND
Sbjct: 1326 CVNLSALCDGVFDCPNGTDESPLCNQDSCLHFNGGCTHRCIQGPFGATCVCPIGYQLAND 1385
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
+ TC+D+NEC+ PG+CSQ C N +GS+ C+C+ Y LE D TCK L++++R
Sbjct: 1386 TKTCEDVNECDIPGFCSQHCVNMRGSFRCACDPEYTLESDGRTCKVTASENLLLVVASRD 1445
Query: 125 SI--------------LVADLE----------------------------EKGKDHRAQD 142
I LV D+ + G D R
Sbjct: 1446 KIIMDNITAHTHNIYSLVQDVSFVVALDFDSVTGRVFWSDLLEGKTWSAFQNGTDKRV-- 1503
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ SGL L E +A DWIG +IYW D L IEV +G++R VL N+T+PRG+ LDP
Sbjct: 1504 VHDSGLSLTEMIAVDWIGRNIYWTDYTLETIEVSKIDGSHRTVLISKNVTKPRGLALDPR 1563
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +FW+DWG +PRIER MDG+ R+ I+ KIYWP GL++D R +YF D+ LD+I
Sbjct: 1564 MGDNVMFWSDWGHHPRIERASMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYI 1623
Query: 263 D 263
+
Sbjct: 1624 E 1624
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 127/343 (37%), Positives = 177/343 (51%), Gaps = 63/343 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCS-----NTCHPTPLGALCTCPPG 58
RC+++ KVCDG DCP G DE C GLCS CH TP G C CPPG
Sbjct: 277 RCISMDKVCDGVPDCPEGEDENNATSGRYCG--TGLCSILNCEYQCHQTPYGGECFCPPG 334
Query: 59 EIL-SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I+ SNDS TC D ++C+ G C Q C + +G + C C EGY+LE H + SAA
Sbjct: 335 HIINSNDSRTCIDFDDCQIWGICDQKCESRQGRHQCLCEEGYILERGQHCKSNDSFSAAS 394
Query: 118 LIISNRHSILVADLEEKG--------------------KDHRA----------------- 140
+I SN +LV DL + + HR
Sbjct: 395 IIFSNGRDLLVGDLHGRNFRILAESKNRGIVMGVDFHYQKHRVFWTDPMQAKVFSTDING 454
Query: 141 ---QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
Q+I+ +D E LA DWI +Y +++R+NRI+V + G R+ L +N+ PRG+
Sbjct: 455 LNTQEILNVSIDAPENLAVDWINNKLYLVETRVNRIDVVNLEGNQRVTLITENLGHPRGI 514
Query: 198 MLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
LDP+ G +LF++DWG P++ER MDGSNR +++TK+ WP G+TLD+ ++RVY+
Sbjct: 515 ALDPTVG--YLFFSDWGSLSGQPKVERAFMDGSNRKDLVTTKLGWPAGITLDLVSKRVYW 572
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
DS+ D+I+ V Y I RK + GG+ VP G
Sbjct: 573 VDSRYDYIE--------TVTYDGIQRKT--VARGGSLVPHPFG 605
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 181/410 (44%), Gaps = 96/410 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + VC+ DC + +DE GC + EC+ C + C T C+C PG L
Sbjct: 3088 HCIEMGTVCNHVDDCSDNSDEK-GCGINECQDSSISHCDHNCTDTITSFYCSCLPGYKLM 3146
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P CSQ C N GSYIC C GY+ E D +C+ ++ +L+ S
Sbjct: 3147 SDKRTCVDIDECKETPQLCSQKCENVIGSYICKCAPGYIREPDGKSCRQNSNIEPYLVFS 3206
Query: 122 NRHSI--LVAD-----------------------------------LEEKGKDHRAQDIV 144
NR+ I L D +E + Q+ +
Sbjct: 3207 NRYYIRNLTIDGTSYSLILQGLGNVVALDFDRVEERLYWIDAEKQIIERMFLNKTNQETI 3266
Query: 145 VSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPR 195
+S L E LA DW+ +YWLD+ L+ + V D G R +LA+ + PR
Sbjct: 3267 ISHRLRRAESLAVDWVSRKLYWLDAILDCLFVSDLEGRQRKMLAQHCVDANNTFCFENPR 3326
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G++L P G +++W DWG++ I RIGMDG+N++ IISTKI WPN +T+D +Y+A
Sbjct: 3327 GIVLHPQRG--YVYWADWGDHAYIARIGMDGTNKTVIISTKIEWPNAITIDYTNDLLYWA 3384
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ L +I+ LE G + + G L
Sbjct: 3385 DAHLGYIEFSDLE----------------------------------GHHRHTVYDGTLP 3410
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
AL ++ T +FWTDW + DGS R +++T
Sbjct: 3411 HPFAL-----TIFEDT------VFWTDWNTRTVEKGNKYDGSGRVVLVNT 3449
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 182/429 (42%), Gaps = 96/429 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAE---CKHKFGLCSNTCHPTPLGA-LCTCPPGEI 60
CV+ VCD DC + +DE GC+L E C K +C C G +C+C PG
Sbjct: 3942 CVSQHYVCDNVDDCGDLSDET-GCNLGENRTCAEK--ICEQNCTQLSNGGFICSCRPGFK 3998
Query: 61 LSN-DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY--VLEYDNHTCKAINHSAAF 117
S D +CQD+NECE+ G C Q C N+KGSY C C +G+ + + C A
Sbjct: 3999 PSTLDKNSCQDINECEEFGICPQSCRNSKGSYECFCVDGFKSMSTHYGERCAADGSPPLL 4058
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L+ N EK ++ ++ + +D YDW D
Sbjct: 4059 LLPENVRIRKYNISSEKFSEYLEEEEHIQAID------YDW------------------D 4094
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK- 236
G V+ ++Q + + D+ G + R + K
Sbjct: 4095 PEGIGLSVVYYTVLSQGSQFG-----AIKRAYLPDF-------ESGSNNPVREVDLGLKY 4142
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI 296
+ P+GL +D R +Y++D+K +I
Sbjct: 4143 LMQPDGLAVDWVGRHIYWSDAKSQ----------------------------------RI 4168
Query: 297 GKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
A +DG L++ QL + A+A++ + G++++ TD G+ P+IE M
Sbjct: 4169 EVATLDGRYRKWLITTQLDQPAAIAVNPKLGLMFW-----------TDQGKQPKIESAWM 4217
Query: 355 DGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
+G +RS + S + WPNGL++D + R+Y++DSK D I+ YDGT R ++I+ D M
Sbjct: 4218 NGEHRSVLASANLGWPNGLSIDYLNGDRIYWSDSKEDVIESIKYDGTDR-RLIINDAMKP 4276
Query: 414 FTNDLMGDN 422
F+ D+ D
Sbjct: 4277 FSLDIFEDQ 4285
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 124/255 (48%), Gaps = 50/255 (19%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I++S + + +G+A+DWI IY+ D I E+G+NR V+A+ +++PR ++LDP
Sbjct: 2461 ILLSNIGVTDGIAFDWINRRIYYSDFSNQTINSMAEDGSNRAVIAR--VSKPRAIVLDPC 2518
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWG N +IER + G+ R I++T + WPNGLTLD+ T +Y+AD+ L
Sbjct: 2519 RG--YMYWTDWGTNAKIERATLGGNFRVPIVNTSLVWPNGLTLDLETDLLYWADASLQ-- 2574
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
KI ++ + GSN +++S +
Sbjct: 2575 --------------------------------KIERSTLTGSNREVVISTAFHSF----- 2597
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G+ Y ++++WTD+ DGS+ + + P+G++ + T++
Sbjct: 2598 --GLTVYG-----QYIYWTDFYTKKIYRANKYDGSDLIAMTTRLPTQPSGISTVVKTQQQ 2650
Query: 383 YFADSKLDFIDFCNY 397
++ F C++
Sbjct: 2651 QCSNPCDQFNGGCSH 2665
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 108/238 (45%), Gaps = 57/238 (23%)
Query: 77 PGYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NR 123
P C Q+C G + C+C G+ L D +C N +F+++S +
Sbjct: 2027 PNACQQICLPVPGGMFSCACASGFKLSPDGRSCSPYN---SFIVVSMLPAVRGFSLELSD 2083
Query: 124 HSILVADLEEKGKDHRAQDIVVS------------------------------------- 146
HS + + +G++ D+ V+
Sbjct: 2084 HSEAMVPVAGQGRNVLHADVDVANGFIYWCDFSSSVRSSNGIRRIKPNGSNFTNIVTYGI 2143
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
G + + G+A DW+ G++Y+ ++ + IEV N T R VL K ++ PR +++DP
Sbjct: 2144 GANGIRGVAVDWVAGNLYFTNAFVYETLIEVIRINTTYRRVLLKVSVDMPRHIVVDPK-- 2201
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
R+LFW D+G+ P+IER +D +NR+ ++S I P GL +D T +Y+ D LD I
Sbjct: 2202 HRYLFWADYGQKPKIERSFLDCTNRTVLVSEGIVTPRGLAVDHDTGYIYWVDDSLDII 2259
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 140/314 (44%), Gaps = 67/314 (21%)
Query: 78 GYCSQMCT------NTKGSYICSCNEGYVLEYDNHTCKAINH------------------ 113
G C+Q+C N Y C C G+ L+ D H C A+ +
Sbjct: 667 GGCAQICVLSHRTDNGGLGYRCKCEFGFELDADEHHCVAVKNFLLFSSQTAVRGIPFTLS 726
Query: 114 -----------SAAFLI---ISNRHS-ILVADLE-----EKGKDHRAQDIVVSG-LDLVE 152
S +F + +HS I +DL ++ D ++++ + L VE
Sbjct: 727 TQEDVMVPVTGSPSFFVGIDFDAQHSTIFYSDLSKNIIYQQKIDGTGKEVITANRLQNVE 786
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
L++DWI ++YW D + V + + R +++ N+ PR +++ P+ G ++F +
Sbjct: 787 CLSFDWISRNLYWTDGGSKSVTVMKLADKSRRQIIS--NLNNPRSIVVHPAAG--YMFLS 842
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKLDFID 263
DW +I R DGS+ I++T + WPNGL +D +T R+Y+ D S LD +D
Sbjct: 843 DWFRPAKIMRAWSDGSHLMPIVNTSLGWPNGLAIDWSTSRLYWVDAFFDKIEHSNLDGLD 902
Query: 264 CKSLEIKTNVNYS---TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG----QLYE 316
K L + + T+F+ ++ + G +++ K+ DG + +++ G +
Sbjct: 903 RKRLGHVDQMTHPFGLTVFKDNVFLTDWRLGAIIRVRKS--DGGDMTVVRRGISSIMHVK 960
Query: 317 ALALDLENGMLYYS 330
A DL+ G Y S
Sbjct: 961 AYDADLQTGTNYCS 974
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 15/142 (10%)
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
++ + + + I R++Y+ D I DGSN +++ A+ LD
Sbjct: 2464 SNIGVTDGIAFDWINRRIYYSDFSNQ----TINSMAEDGSNRAVIARVSKPRAIVLD--- 2516
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384
C +++WTDWG N +IER + G+ R I++T + WPNGLTLD+ T +Y+
Sbjct: 2517 --------PCRGYMYWTDWGTNAKIERATLGGNFRVPIVNTSLVWPNGLTLDLETDLLYW 2568
Query: 385 ADSKLDFIDFCNYDGTGRQQVI 406
AD+ L I+ G+ R+ VI
Sbjct: 2569 ADASLQKIERSTLTGSNREVVI 2590
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 29/186 (15%)
Query: 242 GLTLDIATRRVYFAD--------SKLD-----FIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
G+ D ++++D K+D I L+ +++ I R LYW D G
Sbjct: 744 GIDFDAQHSTIFYSDLSKNIIYQQKIDGTGKEVITANRLQNVECLSFDWISRNLYWTDGG 803
Query: 289 GNGVP-LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
V +K+ D S I+ + ++ + G ++F +DW
Sbjct: 804 SKSVTVMKLA----DKSRRQIISNLNNPRSIVVHPAAG-----------YMFLSDWFRPA 848
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+I R DGS+ I++T + WPNGL +D +T R+Y+ D+ D I+ N DG R+++
Sbjct: 849 KIMRAWSDGSHLMPIVNTSLGWPNGLAIDWSTSRLYWVDAFFDKIEHSNLDGLDRKRLGH 908
Query: 408 IDLMVE 413
+D M
Sbjct: 909 VDQMTH 914
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 111/509 (21%), Positives = 185/509 (36%), Gaps = 157/509 (30%)
Query: 5 CVNLTKVCDGKTDCPNGAD-----------EGPG---CDLAECKHKFGLCSNT------- 43
C+ +CDG+ DC +G+D E P CD + C + LC+
Sbjct: 3856 CIQSFWICDGENDCVDGSDEEIHLCFNVPCESPQRFRCDNSRCIYGHQLCNGVDDCGDGS 3915
Query: 44 ------CHPTPLGALCT-----CPPGEILSNDSVTCQDMNEC----EQPG---------- 78
C P CT C G +S V C ++++C ++ G
Sbjct: 3916 DEKEEHCR-KPTHKPCTDTEYKCSNGNCVSQHYV-CDNVDDCGDLSDETGCNLGENRTCA 3973
Query: 79 --YCSQMCTN-TKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIISN-------RHSIL 127
C Q CT + G +ICSC G+ D ++C+ IN F I +
Sbjct: 3974 EKICEQNCTQLSNGGFICSCRPGFKPSTLDKNSCQDINECEEFGICPQSCRNSKGSYECF 4033
Query: 128 VADLEEKGKDHRAQDIVVSGL-----------------------------DLVEGLAYDW 158
D + H + G + ++ + YDW
Sbjct: 4034 CVDGFKSMSTHYGERCAADGSPPLLLLPENVRIRKYNISSEKFSEYLEEEEHIQAIDYDW 4093
Query: 159 ----IGGHIYWLD--------SRLNRIEVCD-ENGTNRIV----LAKDNITQPRGMMLDP 201
IG + + + R + D E+G+N V L + QP G+ +D
Sbjct: 4094 DPEGIGLSVVYYTVLSQGSQFGAIKRAYLPDFESGSNNPVREVDLGLKYLMQPDGLAVDW 4153
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
R ++W+D ++ RIE +DG R +I+T++ P + + + KL
Sbjct: 4154 V--GRHIYWSD-AKSQRIEVATLDGRYRKWLITTQLDQPAAIAV----------NPKLGL 4200
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALA 319
++W D+G KI A M+G + S+L S L L+
Sbjct: 4201 --------------------MFWTDQGKQP---KIESAWMNGEHRSVLASANLGWPNGLS 4237
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+D NG Y W+D E+ IE I DG++R II+ + +LDI
Sbjct: 4238 IDYLNGDRIY----------WSDSKED-VIESIKYDGTDRRLIINDAM---KPFSLDIFE 4283
Query: 380 RRVYFADSKLDFIDFCNYDGTGRQQVILI 408
++Y+ + + N G G ++ +L+
Sbjct: 4284 DQLYWVAKEKGEVWRQNKFGKGNKEKLLV 4312
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 93/237 (39%), Gaps = 48/237 (20%)
Query: 213 WGENP-RIERIGMDGSNRSTII-STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DGSNR+ + + GL LD +R +Y+ I+ +L
Sbjct: 1795 WVENPGEIHRVKTDGSNRTAFAPLSLLGSSLGLALDWVSRNIYYTTPASRSIEVLTLRGD 1854
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
T + I +G PL +G +A+D G LY+S
Sbjct: 1855 TRYGKTLI---------TNDGTPLGVG----------------FPVGIAVDPARGKLYWS 1889
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 390
TD G +I MDG++ + + + +TLDI +++Y+A +
Sbjct: 1890 D-------HGTDSGVPAKIASANMDGTSLKILFTGNMEHLEVVTLDIQEQKLYWAVTSRG 1942
Query: 391 FIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I+ N DGT R +IL+ + L + LYYS E E ++
Sbjct: 1943 VIERGNVDGTER--MILVHHLAH------------PWGLVVHGSFLYYSDEQYEVIE 1985
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 130/310 (41%), Gaps = 36/310 (11%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNI-TQPRGMMLDPSPGTRWLFW 210
GL+ D+ IY++D+ L+ IE CD +G N R V+A D + P + L +FW
Sbjct: 1603 GLSIDYPNRLIYFMDAYLDYIEFCDYDGQNRRQVIASDLVLHHPHALTLFEDS----VFW 1658
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
TD G + ++ G N+S ++ + + P G+ + I R + + C L +
Sbjct: 1659 TDRGTHQVMQANKWHGRNQSVVMYS-VPQPLGI-IAIHPSRQPSSPNPCASATCSHLCLL 1716
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ--LYEALALDLE----N 324
+ ++ +G L N + L+S + + ++LD E +
Sbjct: 1717 ------SAQEPRHYSCACPSGWNLSDDSVNCVRGDQPFLISVRENVIFGISLDPEVKSND 1770
Query: 325 GMLYYSTLKCTRWLFWTD------WGENP-RIERIGMDGSNRSTII-STKIYWPNGLTLD 376
M+ S ++ + + D W ENP I R+ DGSNR+ + + GL LD
Sbjct: 1771 AMVPISGIQHGYDVEFDDSEQFIYWVENPGEIHRVKTDGSNRTAFAPLSLLGSSLGLALD 1830
Query: 377 IATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND--LMGDNGVPALALDLENG 434
+R +Y+ I+ G R LI TND +G +A+D G
Sbjct: 1831 WVSRNIYYTTPASRSIEVLTLRGDTRYGKTLI------TNDGTPLGVGFPVGIAVDPARG 1884
Query: 435 MLYYSTEGAE 444
LY+S G +
Sbjct: 1885 KLYWSDHGTD 1894
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 95/262 (36%), Gaps = 67/262 (25%)
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNR---IVLAKD----NITQPRGMMLDPSPGTRWLF 209
DW+ +IY+ IEV G R ++ D + P G+ +DP+ G L+
Sbjct: 1830 DWVSRNIYYTTPASRSIEVLTLRGDTRYGKTLITNDGTPLGVGFPVGIAVDPARGK--LY 1887
Query: 210 WTDWGEN----PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
W+D G + +I MDG++ + + + +TLDI +++Y+A + I+
Sbjct: 1888 WSDHGTDSGVPAKIASANMDGTSLKILFTGNMEHLEVVTLDIQEQKLYWAVTSRGVIE-- 1945
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
+ N+DG+ ILV L L +
Sbjct: 1946 --------------------------------RGNVDGTERMILVH-HLAHPWGLVVHGS 1972
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
LYYS + IER+ + + I + GL RVY
Sbjct: 1973 FLYYSD------------EQYEVIERVDKSSGSNKVVFRDNIPYLRGL-------RVYHH 2013
Query: 386 DSKLDFIDFCNYDGTGRQQVIL 407
+ D + C+ + QQ+ L
Sbjct: 2014 RNAADSSNGCSNNPNACQQICL 2035
>gi|348585677|ref|XP_003478597.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 2-like [Cavia porcellus]
Length = 4662
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/299 (41%), Positives = 169/299 (56%), Gaps = 40/299 (13%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCDG DCPNG DE P C+ C H G C++ C P G C CP G L+ND
Sbjct: 1333 CVNLSAVCDGVFDCPNGTDESPLCNEDSCSHFNGGCTHQCIQGPFGVTCLCPSGYQLAND 1392
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
+ TC+D+NEC+ PG+CSQ+C N +GS+ C+C+ Y LE D TCKA L++++++
Sbjct: 1393 TKTCEDINECDTPGFCSQLCYNLRGSFRCTCDSDYNLEDDGRTCKATASENLLLLVASQN 1452
Query: 125 SIL----------VADLEEKGKDHRAQD------------------------------IV 144
I+ + L E G A D I
Sbjct: 1453 KIIADNITSHVHNIFSLVENGSYVIALDFDSVSNRIFWSDSVQGKTWSAFQNGTDWRIIH 1512
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
SG+ + E +A DWIG ++YW+D L IEV +G++R+VL N+T PRG+ LDP
Sbjct: 1513 ESGVSITEAIAVDWIGRNLYWIDYALETIEVSKIDGSHRMVLISKNVTNPRGLALDPRIN 1572
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+FW+DWG +PRIER MDG+ R+ II KIYWP GLT+D+ R +YF D+ LD++D
Sbjct: 1573 EHIMFWSDWGRHPRIERASMDGTLRTVIIQEKIYWPCGLTIDLPNRLIYFMDAYLDYLD 1631
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 112/342 (32%), Positives = 176/342 (51%), Gaps = 61/342 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGL---CSNTCHPTPLGALCTCPPGEI 60
+C+++ +VCDG DCP GADE + + C C CH TP G C CPPG +
Sbjct: 285 QCISIYQVCDGVPDCPRGADENSTSNESHCGTSLCSVLNCEFQCHKTPYGGSCFCPPGYV 344
Query: 61 LS-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI 119
++ NDS TC ++C+ G C Q C N G + C C EGYVLE + H + + A +I
Sbjct: 345 INQNDSRTCVAFDDCQIWGICDQKCENRMGHHRCGCEEGYVLERERHCRANTSFNEASVI 404
Query: 120 ISNRHSILVADLEEKG--------------------KDH--------------------R 139
SN +++ D+ + ++H R
Sbjct: 405 FSNGRDLVIGDIHGRSFQILVHSQNRGLALGVDFHYQEHKVFWTSFMENKVFSVDLNSLR 464
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
Q+I+ ++ E +A DW+ +Y +++R+ RI++ + +G++RI L +N+ PRG+ +
Sbjct: 465 IQEILNVSIEAPENMAVDWVNNKLYIVETRIKRIDMMNLDGSHRITLIAENLGHPRGIAV 524
Query: 200 DPSPGTRWLFWTDW----GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
DP+ G +LF++DW GE P++ER MDGSNR ++ TK+ WP G+TLD+ +RVY+
Sbjct: 525 DPTIG--YLFFSDWRSLSGE-PKLERAFMDGSNRKDLVKTKLGWPAGVTLDLMAKRVYWV 581
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
DS+ D I+ V Y I RK + GG+ +P G
Sbjct: 582 DSRFDCIE--------TVTYDGIQRKT--VLHGGSLIPHPFG 613
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/367 (33%), Positives = 180/367 (49%), Gaps = 65/367 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + KVC+ DC + +DE GC + EC H C + C T C+C PG L
Sbjct: 3095 HCIEMVKVCNHLDDCSDNSDEK-GCGINECLDHSISGCDHNCTDTVTSFYCSCRPGYKLM 3153
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P CSQ C N GSYIC C GY+ E D TC+ + +LI S
Sbjct: 3154 SDKKTCVDIDECKETPYVCSQKCENEIGSYICKCAPGYIREPDGKTCRQNSDIEPYLIFS 3213
Query: 122 NRHSI--LVAD-----------------------------------LEEKGKDHRAQDIV 144
NR+ + L D +E + ++I+
Sbjct: 3214 NRYYLRNLTVDGYSYSLILQGLGNAVALDFDRVEKRLYWIDVQRQVIERMFLNQTHREII 3273
Query: 145 VSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPR 195
+S L +GLA DW+ +YW+D++L+ I V D G R +LA+ + PR
Sbjct: 3274 MSHRLPASKGLAVDWVSRKLYWVDAQLDGIFVSDLQGQYRRMLAQHCMDANNTFCFDNPR 3333
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G+++ P G +++WTDWGE+ I R+GMDG+N+S IISTK+ WPN +T+D +Y+A
Sbjct: 3334 GIVVHPQYG--YVYWTDWGEHAYIARVGMDGANKSVIISTKLSWPNAITIDYTNDFLYWA 3391
Query: 256 DSKLDFIDCKSLE----------IKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGS 304
D+ L +I+ LE + + T+F +YW D V K K N GS
Sbjct: 3392 DAHLGYIEYSDLEGHHRHTVYDGVLPHPYAITVFEDTIYWTDWNTRTVE-KGNKYN--GS 3448
Query: 305 NASILVS 311
N +LV+
Sbjct: 3449 NRVVLVN 3455
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 179/423 (42%), Gaps = 86/423 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGA-LCTCPPG-EIL 61
C++ +CD DC + +DE GC++ + + LC + C G +C+C G +
Sbjct: 3949 CISQLNICDDVDDCGDLSDET-GCNIGKDRTCAENLCEHNCTQLSEGGFICSCRSGYKAG 4007
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY--VLEYDNHTCKAINHSAAFLI 119
++D +CQD+NECE G C Q C NTKGSY C C +G+ + + C A + L+
Sbjct: 4008 TSDRNSCQDINECEGFGVCPQNCRNTKGSYECFCADGFRSLSTHYGERCAADGNPPLLLL 4067
Query: 120 ISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDEN 179
N EK ++ + + +D YDW D
Sbjct: 4068 PENVRIRKYNVSSEKFSEYLEDEEHIQTID------YDW------------------DPE 4103
Query: 180 GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYW 239
GT V+ + Q P G + P E + ++ + +
Sbjct: 4104 GTGLSVVYYTVLAQ------SPRFGAIKRAYI-----PNFESGRNNPTHEVDLGLNYVMQ 4152
Query: 240 PNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKA 299
P+GL +D R VY++D+K ++ A
Sbjct: 4153 PDGLAVDWVGRHVYWSDAKNQ----------------------------------RVEVA 4178
Query: 300 NMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNR 359
+DG LV+ QL + A+ + + +FW+D G+ P+IE M+G +R
Sbjct: 4179 RLDGRYRKWLVTTQLDQPTAIVVNPKL---------GLMFWSDQGKEPKIESAWMNGEHR 4229
Query: 360 STIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
S ++S + WPNGL++D + R+Y++DSK D I+ YDG+ R +VI+ + M ++ D+
Sbjct: 4230 SVLVSENLGWPNGLSIDYLNNDRIYWSDSKEDVIETIKYDGSDR-RVIVKEAMKPYSLDI 4288
Query: 419 MGD 421
D
Sbjct: 4289 FED 4291
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 98/169 (57%), Gaps = 17/169 (10%)
Query: 133 EKGKDHRAQDIVVSGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
E G+++ ++ + GL+ V +GLA DW+G H+YW D++ R+EV +G R L
Sbjct: 4133 ESGRNNPTHEVDL-GLNYVMQPDGLAVDWVGRHVYWSDAKNQRVEVARLDGRYRKWLVTT 4191
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IA 248
+ QP ++++P G +FW+D G+ P+IE M+G +RS ++S + WPNGL++D +
Sbjct: 4192 QLDQPTAIVVNPKLGL--MFWSDQGKEPKIESAWMNGEHRSVLVSENLGWPNGLSIDYLN 4249
Query: 249 TRRVYFADSKLDFI--------DCKSLEIKTNVNYS-TIFR-KLYWIDE 287
R+Y++DSK D I D + + + YS IF KLYW+ +
Sbjct: 4250 NDRIYWSDSKEDVIETIKYDGSDRRVIVKEAMKPYSLDIFEDKLYWVSK 4298
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 139/323 (43%), Gaps = 60/323 (18%)
Query: 63 NDSVTCQDMNE-CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN--------- 112
N S C D N CEQ S N Y C C+ G+ L+ D H C+ +
Sbjct: 665 NVSNPCGDHNGGCEQVCVLSHRTDNGGLGYRCKCSFGFELDADEHHCRVLKSFLLFSSEL 724
Query: 113 --------HSAAFLII----------------SNRHSILVADLEE-----KGKDHRAQDI 143
HS +I ++ ++I +D + + D ++I
Sbjct: 725 AVRGIPFTHSTQEDVILPVTRSTSFYLGIDFDAHENAIFFSDTSQDIIYKQKIDGTGREI 784
Query: 144 VVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ + ++ VE L +DWI ++YW D L + V +R + + N+ PR +++ P
Sbjct: 785 LTANRVENVESLTFDWISKNLYWTDGSLKSVSVMKLADKSRRAIVQ-NLNNPRAIVVHPI 843
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G ++F++DW +I R DGS+ I++T + WPNGL +D R+Y+ D+ D I
Sbjct: 844 AG--YIFFSDWFRPAKIMRAWADGSHLVPIVNTTLGWPNGLAIDWEASRLYWVDAFFDKI 901
Query: 263 DCKS-----------LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+ + +E T+ T+F+ + + G +++ K +DG + I+ S
Sbjct: 902 EHSTFDGFDRRRLGHVEQMTHPFGLTVFKDHVYFTDWRLGAIVQVRK--LDGGDMRIIRS 959
Query: 312 G----QLYEALALDLENGMLYYS 330
G +A +L+ G Y S
Sbjct: 960 GITNVMHVKAYDANLQTGTNYCS 982
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 95/182 (52%), Gaps = 18/182 (9%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++VS + G+A+DWI IY+ D I E+G+ R V+A+ I++PR ++LDP
Sbjct: 2468 VIVSDIGTSNGIAFDWINRRIYYSDYVNETINSIAEDGSMRTVVAR--ISKPRSIVLDPC 2525
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W++W +IE+ + G+ R I++T + WP+GLTLD +Y+ D+ L I
Sbjct: 2526 HG--YMYWSNWDTPAQIEKATLGGNFRVPIVNTSLVWPSGLTLDYDLNLLYWVDTSLQKI 2583
Query: 263 DCKSLE-IKTNVNYSTIFRK---------LYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+ S+ + V S+ FR +YW N K+ +AN + I ++
Sbjct: 2584 ERISVTGMNREVIISSAFRSFGLTLYGQYIYWT----NFFTKKVYRANKYDGSGQIAMTT 2639
Query: 313 QL 314
L
Sbjct: 2640 TL 2641
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 123/302 (40%), Gaps = 75/302 (24%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH 138
C Q+C G + C+C G+ L D+ TC +F+++S +I LE DH
Sbjct: 2037 CQQICLPVPGGLFSCACATGFKLNPDHQTCSPYK---SFIVVSMLSAIRGFSLEVS--DH 2091
Query: 139 RAQDIVVSG---------LDLVEGLAY--------------------------------- 156
+ V+G +D+ G Y
Sbjct: 2092 SEAMVPVAGQGRNALHVDVDVASGFIYWCDFSSSVTSYNAIRRIRPDGSSFTNIVTSGIG 2151
Query: 157 ---------DWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
DW+ G++Y+ + IEV N T R VL K + PR +++DP
Sbjct: 2152 GNGIRGIAVDWVAGNLYFTNGFATETLIEVLRINTTYRRVLLKVTVDMPRHIVVDPK--N 2209
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI--- 262
R+LFW D+G+ P+IER +D +NR+ ++S I P GL +D ++ +Y+ D LD I
Sbjct: 2210 RYLFWADYGQKPKIERSFLDCTNRTILVSEGIVTPRGLAVDHSSGYIYWVDDSLDIIARI 2269
Query: 263 ---DCKSLEIKTNVNYSTIF------RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+S ++ +Y T F + W+D N + D ++A ++
Sbjct: 2270 HRNGGESEVVRYGSHYPTPFGITVFGNSIIWVDR--NLKKIFQASKEPDNTDAPTVIRDN 2327
Query: 314 LY 315
+Y
Sbjct: 2328 IY 2329
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 29/193 (15%)
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFI-----DCKSLEIKT--------NVNYSTIFR 280
ST Y G+ D ++F+D+ D I D EI T ++ + I +
Sbjct: 746 STSFYL--GIDFDAHENAIFFSDTSQDIIYKQKIDGTGREILTANRVENVESLTFDWISK 803
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFW 340
LYW D G+ + + K D S +I+ + A+ + G ++F+
Sbjct: 804 NLYWTD--GSLKSVSVMKL-ADKSRRAIVQNLNNPRAIVVHPIAG-----------YIFF 849
Query: 341 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
+DW +I R DGS+ I++T + WPNGL +D R+Y+ D+ D I+ +DG
Sbjct: 850 SDWFRPAKIMRAWADGSHLVPIVNTTLGWPNGLAIDWEASRLYWVDAFFDKIEHSTFDGF 909
Query: 401 GRQQVILIDLMVE 413
R+++ ++ M
Sbjct: 910 DRRRLGHVEQMTH 922
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
R+LFW D+G+ P+IER +D +NR+ ++S I P GL +D ++ +Y+ D LD I
Sbjct: 2210 RYLFWADYGQKPKIERSFLDCTNRTILVSEGIVTPRGLAVDHSSGYIYWVDDSLDIIARI 2269
Query: 396 NYDGTGRQQVI 406
+ +G G +V+
Sbjct: 2270 HRNG-GESEVV 2279
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 114/494 (23%), Positives = 185/494 (37%), Gaps = 127/494 (25%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG--------------CDLAECKHKFGLCSNT------- 43
CV VCDG+ DC +G+DE CD + C + +C+
Sbjct: 3863 CVQSYFVCDGEDDCGDGSDEALHLCFSVACEPPQRFRCDNSRCLYAQRVCNGVDDCGDGT 3922
Query: 44 ------CH-PTPLGALCT-----CPPGEILSNDSVTCQDMNEC----EQPG--------- 78
C PTP CT C G +S ++ C D+++C ++ G
Sbjct: 3923 DEKEEHCRKPTP--KPCTENEFKCSNGNCISQLNI-CDDVDDCGDLSDETGCNIGKDRTC 3979
Query: 79 ---YCSQMCTN-TKGSYICSCNEGYVL-EYDNHTCKAINHSAAFLIISNR-------HSI 126
C CT ++G +ICSC GY D ++C+ IN F + +
Sbjct: 3980 AENLCEHNCTQLSEGGFICSCRSGYKAGTSDRNSCQDINECEGFGVCPQNCRNTKGSYEC 4039
Query: 127 LVADLEEKGKDHRAQDIVVSG----LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
AD H + G L L E + R+ + V E +
Sbjct: 4040 FCADGFRSLSTHYGERCAADGNPPLLLLPENV--------------RIRKYNVSSEKFSE 4085
Query: 183 RIVLAKDNITQPRGMMLDPS-PGTRWLFWTDWGENPRIERIGM-------DGSNRST--- 231
L + Q DP G +++T ++PR I G N T
Sbjct: 4086 --YLEDEEHIQTIDYDWDPEGTGLSVVYYTVLAQSPRFGAIKRAYIPNFESGRNNPTHEV 4143
Query: 232 -IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE-------IKTNVNYSTI----- 278
+ + P+GL +D R VY++D+K ++ L+ + T ++ T
Sbjct: 4144 DLGLNYVMQPDGLAVDWVGRHVYWSDAKNQRVEVARLDGRYRKWLVTTQLDQPTAIVVNP 4203
Query: 279 -FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALD-LENGMLYYSTLKC 334
++W D+G KI A M+G + S+LVS L L++D L N +Y
Sbjct: 4204 KLGLMFWSDQGKEP---KIESAWMNGEHRSVLVSENLGWPNGLSIDYLNNDRIY------ 4254
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDF 394
W+D E+ IE I DGS+R I+ + +LDI ++Y+ + +
Sbjct: 4255 -----WSDSKED-VIETIKYDGSDRRVIVKEAM---KPYSLDIFEDKLYWVSKEKGEVWM 4305
Query: 395 CNYDGTGRQQVILI 408
N G G ++ +L+
Sbjct: 4306 QNKFGQGMKEKVLV 4319
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 152/408 (37%), Gaps = 113/408 (27%)
Query: 46 PTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCT-NTKGS--YICSCNEGYVLE 102
P PLG + P + S N C CS +C +++G Y C+C G+ L
Sbjct: 1692 PRPLGIVAVHPAKQPRS--------PNPCASVP-CSHLCLLSSQGPRFYSCACPSGWNLS 1742
Query: 103 YDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGH 162
+D+ +C + FL+ H I L+ + K + A + ++G+ + +D +
Sbjct: 1743 HDSMSC--VRGDQPFLMTVRMHVIFGISLDPEVKSNDAM-VPIAGIQSGFDVEFDEVEQF 1799
Query: 163 IYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP-RIER 221
IY W ENP I R
Sbjct: 1800 IY------------------------------------------------WVENPGEIHR 1811
Query: 222 IGMDGSNRSTIISTKIYWPN-GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFR 280
+ DG+NR+ + + GL D +R +Y+ +S+E+ T + T +R
Sbjct: 1812 VKTDGTNRTVFAPLSLLGSSMGLAFDWISRNMYYTTPAS-----QSIEVLT-LRGETRYR 1865
Query: 281 KLYWIDEGGN-GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLF 339
K ++G N GV +G +A+D G LY+S
Sbjct: 1866 KTLITNDGTNLGVGFPVG--------------------IAVDPARGKLYWSDQG------ 1899
Query: 340 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
TD G +I MDG++ + + + +TLDI +++Y+A + I+ N DG
Sbjct: 1900 -TDSGIPAKIASANMDGTSSKILFTGNMDHLEIVTLDIKEQKLYWAVTSRGVIERGNVDG 1958
Query: 400 TGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
T R +IL+ + + + + LYYS E E ++
Sbjct: 1959 TER--MILVYHLSH------------PWGIAVHDSFLYYSDEQYEVIE 1992
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 77/180 (42%), Gaps = 45/180 (25%)
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWID 286
++ T+I + I NG+ D RR+Y++D +++
Sbjct: 2463 THTPTVIVSDIGTSNGIAFDWINRRIYYSD---------------------------YVN 2495
Query: 287 EGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
E N + DGS +++ ++ LD C +++W++W
Sbjct: 2496 ETINSIA-------EDGSMRTVVARISKPRSIVLD-----------PCHGYMYWSNWDTP 2537
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ + G+ R I++T + WP+GLTLD +Y+ D+ L I+ + G R+ +I
Sbjct: 2538 AQIEKATLGGNFRVPIVNTSLVWPSGLTLDYDLNLLYWVDTSLQKIERISVTGMNREVII 2597
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 127/315 (40%), Gaps = 46/315 (14%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLAKDNITQPRGMMLDPSPGTRWLFW 210
GL D IY++D+ L+ ++ CD NG +R ++ N+ P + L +FW
Sbjct: 1610 GLTIDLPNRLIYFMDAYLDYLDFCDYNGQHRRQVIAGNLNVLHPYALTL----FEESVFW 1665
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
TD +E G+N+S ++ + P G+ V+ A C S+
Sbjct: 1666 TDRATRQVMEANKWHGANQSVVM-YNVPRPLGIVA------VHPAKQPRSPNPCASVPCS 1718
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE------N 324
S+ + Y +G L + + L++ +++ + L+ +
Sbjct: 1719 HLCLLSSQGPRFYSC-ACPSGWNLSHDSMSCVRGDQPFLMTVRMHVIFGISLDPEVKSND 1777
Query: 325 GMLYYSTLK---------CTRWLFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPN-GL 373
M+ + ++ ++++W ENP I R+ DG+NR+ + + GL
Sbjct: 1778 AMVPIAGIQSGFDVEFDEVEQFIYWV---ENPGEIHRVKTDGTNRTVFAPLSLLGSSMGL 1834
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN---GVP-ALAL 429
D +R +Y+ I+ G R + LI TND G N G P +A+
Sbjct: 1835 AFDWISRNMYYTTPASQSIEVLTLRGETRYRKTLI------TND--GTNLGVGFPVGIAV 1886
Query: 430 DLENGMLYYSTEGAE 444
D G LY+S +G +
Sbjct: 1887 DPARGKLYWSDQGTD 1901
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ + L + D+ +YW D+ L IE D G +R + + P + +
Sbjct: 3368 IISTKLSWPNAITIDYTNDFLYWADAHLGYIEYSDLEGHHRHTVYDGVLPHPYAITVFED 3427
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIIST 235
++WTDW + +GSNR +++T
Sbjct: 3428 T----IYWTDWNTRTVEKGNKYNGSNRVVLVNT 3456
>gi|354467110|ref|XP_003496014.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Cricetulus griseus]
Length = 4675
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 168/301 (55%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+NL+ +CDG DCPNG DE P C+ C H G C++ C P GA C CP G L+ND
Sbjct: 1342 CINLSALCDGNFDCPNGTDESPLCNQDSCLHYNGGCTHQCVQGPFGATCVCPSGYQLAND 1401
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
+ TC+D++EC+ PG+CSQ C N +G++ C+C+ Y LE D TCK + L I++R
Sbjct: 1402 TKTCEDIDECDSPGFCSQHCVNMRGTFRCTCDPEYTLEGDRRTCKVTASESLLLAIASRD 1461
Query: 125 SILV----------------------------------ADLE--------EKGKDHRAQD 142
I+V +DL+ + G D R
Sbjct: 1462 KIIVDNITAHMHNIYSLVQDVSFVVALDFDSVTGRVFWSDLQQGKTWSVFQNGTDQRV-- 1519
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ SGL + E +A DWIG ++YW D L IEV +G++R VL N++ PRG+ LDP
Sbjct: 1520 VHDSGLSVTETVAVDWIGRNLYWTDYALETIEVSKIDGSHRTVLISKNVSNPRGLALDPR 1579
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +FW+DWG +PRIER MDG+ R+ I+ KIYWP GL++D R +YF D+ LD+I
Sbjct: 1580 IGNHLMFWSDWGRHPRIERASMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYI 1639
Query: 263 D 263
+
Sbjct: 1640 E 1640
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 117/343 (34%), Positives = 172/343 (50%), Gaps = 63/343 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
RC+ + KVCDG DCP G DE G C C C CH TP G C CPP
Sbjct: 294 RCIPIDKVCDGVPDCPGGEDETNTTTGRQCGTGICS--VLNCEYQCHQTPYGGECFCPPS 351
Query: 59 EILS-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I++ NDS TC D ++C+ G C Q C N +G + C C EGY+LE H + S A
Sbjct: 352 HIINVNDSRTCIDFDDCQIWGTCDQKCENRQGRHQCLCEEGYILERGQHCKANSSFSVAS 411
Query: 118 LIISNRHSILVADL---------EEKGKDH------------------------------ 138
+I SN +L+ DL E K +
Sbjct: 412 IIFSNGRDLLIGDLHGRNFQILVESKNRGQAMGVDFHYQKRRVFWTDPVQDKVFSTDING 471
Query: 139 -RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
Q+I+ ++ E LA DWI +Y +++++NRI++ + +G+ RI L +N+ +PRG+
Sbjct: 472 LNTQEILNVSVEAPENLAVDWINNKLYLVETKVNRIDMVNLDGSQRITLITENLGRPRGI 531
Query: 198 MLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
+DP+ G +LF++DW P++ER MDGSNR ++ TK+ WP G+TLD+ ++RVY+
Sbjct: 532 AVDPTVG--YLFFSDWASLSGQPKVERAFMDGSNRKDLVKTKVGWPAGITLDLVSKRVYW 589
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
DS+ D+I+ V Y + R + GG+ VP G
Sbjct: 590 VDSRYDYIE--------TVTYDGVQRMT--VARGGSLVPHPFG 622
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 127/369 (34%), Positives = 173/369 (46%), Gaps = 69/369 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + KVC+ DC + +DE GC + EC+ C + C T C+C PG L
Sbjct: 3104 HCIEMGKVCNHVDDCLDNSDEK-GCGINECQDTSISRCDHNCTDTITSFYCSCLPGYKLM 3162
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P CSQ C N GSYIC C GY+ E D TC+ ++ +LI S
Sbjct: 3163 SDKRTCVDIDECKESPQLCSQKCENVVGSYICKCAPGYIREPDGKTCRQNSNIEPYLIFS 3222
Query: 122 NRHSI----------------------LVADLEEK-----------------GKDHRAQD 142
NR+ + L D EK K +R +
Sbjct: 3223 NRYYLRNLTTDGVLYSLILQGLGNAVALDFDRVEKRLYWIDTDKKIIERMFLNKTNR-ET 3281
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQP 194
I+ L E LA DW+ +YWLD+ L+ + V D G NR +LA+ + P
Sbjct: 3282 IISHRLLRAESLAVDWVSRKLYWLDATLDCLFVSDLEGRNRKMLAQHCVDANNTFCFRNP 3341
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
RG++L P G ++W DWG I R GMDG+N S IISTKI WPN +T+D +Y+
Sbjct: 3342 RGIVLHPKNGH--VYWADWGSRAFIARTGMDGTNMSVIISTKITWPNAITIDYTNDLLYW 3399
Query: 255 ADSKLDFIDCKSLE-IKTNVNYS---------TIFR-KLYWIDEGGNGVPLKIGKAN-MD 302
AD+ L +I+ LE + Y TIF +YW D V K N D
Sbjct: 3400 ADAHLGYIEFSDLEGHHRHTVYDGTLPHPYAITIFEDTVYWTDWNTRTVE----KGNKYD 3455
Query: 303 GSNASILVS 311
GSN +LV+
Sbjct: 3456 GSNRVVLVN 3464
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 98/192 (51%), Gaps = 28/192 (14%)
Query: 242 GLTLDIATRRVYFAD-------------SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
L D T RV+++D + + L + V I R LYW D
Sbjct: 1487 ALDFDSVTGRVFWSDLQQGKTWSVFQNGTDQRVVHDSGLSVTETVAVDWIGRNLYWTDYA 1546
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + + +DGS+ ++L+S + LALD G +FW+DWG +
Sbjct: 1547 LETIEV----SKIDGSHRTVLISKNVSNPRGLALDPRIG---------NHLMFWSDWGRH 1593
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
PRIER MDG+ R+ I+ KIYWP GL++D R +YF D+ LD+I+FC+YDG R+QVI
Sbjct: 1594 PRIERASMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYIEFCDYDGHSRRQVI 1653
Query: 407 LIDLMVEFTNDL 418
DL++ + L
Sbjct: 1654 ASDLVLRHPHAL 1665
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 142/324 (43%), Gaps = 73/324 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGA-LCTCPPGEILS 62
C++ VCD DC + +DE GC+L E + +C C G +C+C PG S
Sbjct: 3957 CISQHYVCDNVDDCGDLSDES-GCNLGENRTCAENICEQNCTQLSNGGFICSCIPGFKSS 4015
Query: 63 N-DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH---TCKAINHSAAFL 118
D +CQD+NECEQ G C Q C N+KGSY C C +G+ D+H C A L
Sbjct: 4016 TLDKNSCQDINECEQFGICPQSCRNSKGSYECLCADGF-KSMDSHFGERCAADGDPPLLL 4074
Query: 119 IISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDW----IG-GHIYWLD------ 167
+ N EK ++ ++ + +D YDW IG G +Y+
Sbjct: 4075 LPENVRIRKYNVSSEKFSEYLEEEEHIQTID------YDWDPEGIGLGVVYYTVLGQGSE 4128
Query: 168 -SRLNRIEVCD-ENGTNRIVLAKD----NITQPRGMMLD--------------------- 200
+ R + D E+G+N + D I QP G+ +D
Sbjct: 4129 FGAIKRAYIPDFESGSNNPIREVDLGLKYIMQPDGLAVDWVGRHIYWSDAKSQRIEVATL 4188
Query: 201 --------------------PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 240
+P +FWTD G+ P+IE M+G +RS ++S + WP
Sbjct: 4189 DGRYRKWLITTDLDQPGAIVVNPKLGLMFWTDQGKQPKIESAWMNGEHRSVLVSEDLGWP 4248
Query: 241 NGLTLD-IATRRVYFADSKLDFID 263
NGL++D + R+Y++DSK D I+
Sbjct: 4249 NGLSIDYLNDDRIYWSDSKEDVIE 4272
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 144/338 (42%), Gaps = 80/338 (23%)
Query: 77 PGYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NR 123
P C Q+C T G + C+C G+ L D+ +C N +F+++S +
Sbjct: 2043 PNSCQQICLPTPGGMFSCACASGFKLGPDHRSCTPYN---SFIVVSKLSAIRGFSLELSD 2099
Query: 124 HSILVADLEEKGKDHRAQDIVVS------------------------------------- 146
H+ + + +G++ D+ V+
Sbjct: 2100 HAEAMVPVAGQGRNVLHVDVDVASGFIYWCDFSNSARFSNGIRRIKPDGSNFTNIVTYGI 2159
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
G + + G+A DW+ G++Y+ ++ ++ IEV N T R VL K ++ PR +++DP
Sbjct: 2160 GANGIRGIAVDWVAGNLYFTNAFVSETLIEVLRINTTYRRVLLKVSVDMPRHIVVDPK-- 2217
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
+R+LFW D+G+ P+IER +D +NR+ ++S I P GL +D +T +Y+ D LD I
Sbjct: 2218 SRYLFWADYGQKPKIERSFLDCTNRTVLVSEGIVTPRGLAMDHSTGYIYWVDDSLDIIAR 2277
Query: 265 KSLE------IKTNVNYSTIF------RKLYWID-----------EGGNGVPLKIGKANM 301
L+ ++ Y T + + W+D E GN P ++ + N+
Sbjct: 2278 IHLDGGESQVVRYGSRYPTPYGITVFGESIIWVDRNLKKIFQASKEPGNTDPPEVIRDNI 2337
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLF 339
+ + A +L N S C+ + F
Sbjct: 2338 NLLRDVTIFDEHAQPLSAAELNNNPCLQSNGGCSHFCF 2375
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 100/174 (57%), Gaps = 19/174 (10%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+++S + +++G+A+DWI IY+ D I E+G+NR V+A ++ +PR ++LDP
Sbjct: 2477 VLLSDIGIIDGIAFDWINRRIYYSDYSNQTINSVAEDGSNRAVIA--HVPKPRAIVLDPC 2534
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWG N +IER + G+ R I++T + WPNGLTLD+ T +Y+AD+ I
Sbjct: 2535 RG--YMYWTDWGTNAKIERATLAGNFRVPIVNTSLVWPNGLTLDLETDLLYWADASRQKI 2592
Query: 263 DCKSLE-IKTNVNYSTIF---------RKLYWIDEGGNGVPLKIGKAN-MDGSN 305
+ SL V ST F + +YW D KI +AN DGS+
Sbjct: 2593 ERSSLTGTNREVIVSTAFNSFGLTVYGQYIYWTDY----FTRKIYRANKYDGSD 2642
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 137/313 (43%), Gaps = 67/313 (21%)
Query: 74 CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI------- 126
CEQ S N Y C C G+ L+ D C A+ + FL+ S++ ++
Sbjct: 686 CEQVCVLSHRTDNGGLGYRCKCEFGFELDTDERHCVAVRN---FLLFSSKTAVRGIPFTL 742
Query: 127 ---------------------------------LVADLEEKGK-DHRAQDIVVSG-LDLV 151
+ D+ K K D ++++ + L V
Sbjct: 743 STQEDVMVPITGSPSYFSGIDFDAQSSTIFFSDIAKDIIYKQKIDGTGKEVLAANRLGNV 802
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
E L +DWI ++YW D L + V + + R +++ N+ PR +++ P+ G ++FW
Sbjct: 803 ESLTFDWISRNLYWTDGGLKSVSVMKLADKSRRQIIS--NLNNPRSIVVHPTAG--FIFW 858
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKLDFI 262
+DW +I R DGS+ I+++ + WPNGL +D + R+Y+ D S D +
Sbjct: 859 SDWQRPAKIMRAWSDGSHIMPIVNSSLGWPNGLAIDWSASRLYWVDAFFDKIEHSTFDGL 918
Query: 263 DCKSLEIKTNVNYS---TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG----QLY 315
D K L + + TIF+ ++ + G +++ K+ DG + +++ SG
Sbjct: 919 DRKRLGHIDQMTHPFGLTIFKDNLFLTDWRLGALIRVRKS--DGGDMTVIRSGIESIMHV 976
Query: 316 EALALDLENGMLY 328
+A +DL+ G Y
Sbjct: 977 KAYDVDLQTGSNY 989
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 181/463 (39%), Gaps = 118/463 (25%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
RC+ ++C+G DC +G DE + C H C G +S
Sbjct: 3912 RCIYGHQLCNGVDDCGDGTDE-----------REEHCRKPTHKPCTQTEYKCGNGNCISQ 3960
Query: 64 DSVTCQDMNEC----EQPG------------YCSQMCTN-TKGSYICSCNEGYVLE-YDN 105
V C ++++C ++ G C Q CT + G +ICSC G+ D
Sbjct: 3961 HYV-CDNVDDCGDLSDESGCNLGENRTCAENICEQNCTQLSNGGFICSCIPGFKSSTLDK 4019
Query: 106 HTCKAINHSAAFLIISNR-------HSILVADLEEKGKDHRAQDIVVSG----LDLVEGL 154
++C+ IN F I + L AD + H + G L L E +
Sbjct: 4020 NSCQDINECEQFGICPQSCRNSKGSYECLCADGFKSMDSHFGERCAADGDPPLLLLPENV 4079
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP-GTRWLFWTDW 213
R+ + V E + L ++ Q DP G +++T
Sbjct: 4080 --------------RIRKYNVSSEKFSE--YLEEEEHIQTIDYDWDPEGIGLGVVYYTVL 4123
Query: 214 GENPRIERIGM-------DGSN---RSTIISTK-IYWPNGLTLDIATRRVYFADSKLDFI 262
G+ I GSN R + K I P+GL +D R +Y++D+K
Sbjct: 4124 GQGSEFGAIKRAYIPDFESGSNNPIREVDLGLKYIMQPDGLAVDWVGRHIYWSDAKSQ-- 4181
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALAL 320
+I A +DG L++ L + A+ +
Sbjct: 4182 --------------------------------RIEVATLDGRYRKWLITTDLDQPGAIVV 4209
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IAT 379
+ + G++ FWTD G+ P+IE M+G +RS ++S + WPNGL++D +
Sbjct: 4210 NPKLGLM-----------FWTDQGKQPKIESAWMNGEHRSVLVSEDLGWPNGLSIDYLND 4258
Query: 380 RRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
R+Y++DSK D I+ YDGT R ++IL + M F+ D+ D
Sbjct: 4259 DRIYWSDSKEDVIETIKYDGTDR-RLILNEAMKPFSLDIFEDQ 4300
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 103/222 (46%), Gaps = 41/222 (18%)
Query: 213 WGENP-RIERIGMDGSNRSTIISTKIYWPN-GLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DGSNR+ + + GL LD +R +Y+ S I+ +L+
Sbjct: 1811 WVENPGEIHRVKTDGSNRTVFAPLSLLGSSYGLALDWVSRNLYYTTSASRSIEVVTLQGD 1870
Query: 271 TNVNYSTIFR--------------------KLYWIDEGGN-GVPLKIGKANMDGSNASIL 309
T + I KLYW D+G N GVP KI ANMDG++ IL
Sbjct: 1871 TRYGKTLIANDGTPLGVGFPMSIALDPVRGKLYWSDQGTNSGVPAKIASANMDGTSLKIL 1930
Query: 310 VSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 367
+G L E + LD++ LY++ +R + IER +DG+ R I+ +
Sbjct: 1931 FTGNLEHLEVVTLDIQAQKLYWAVT--SRGV----------IERGNVDGTER-IILVHHL 1977
Query: 368 YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
P GL L +Y++D + + I+ + +G +VIL D
Sbjct: 1978 AHPWGLALHGPF--LYYSDEQYEVIERVD-KFSGSNKVILRD 2016
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 29/187 (15%)
Query: 241 NGLTLDIATRRVYFADSKLDFI-----DCKSLEIKT--------NVNYSTIFRKLYWIDE 287
+G+ D + ++F+D D I D E+ ++ + I R LYW D
Sbjct: 760 SGIDFDAQSSTIFFSDIAKDIIYKQKIDGTGKEVLAANRLGNVESLTFDWISRNLYWTDG 819
Query: 288 GGNGVP-LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
G V +K+ D S I+ + ++ + G ++FW+DW
Sbjct: 820 GLKSVSVMKLA----DKSRRQIISNLNNPRSIVVHPTAG-----------FIFWSDWQRP 864
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I R DGS+ I+++ + WPNGL +D + R+Y+ D+ D I+ +DG R+++
Sbjct: 865 AKIMRAWSDGSHIMPIVNSSLGWPNGLAIDWSASRLYWVDAFFDKIEHSTFDGLDRKRLG 924
Query: 407 LIDLMVE 413
ID M
Sbjct: 925 HIDQMTH 931
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 15/134 (11%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+ + I R++Y+ D I DGSN +++ A+ LD
Sbjct: 2488 IAFDWINRRIYYSDYSNQ----TINSVAEDGSNRAVIAHVPKPRAIVLD----------- 2532
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
C +++WTDWG N +IER + G+ R I++T + WPNGLTLD+ T +Y+AD+ I
Sbjct: 2533 PCRGYMYWTDWGTNAKIERATLAGNFRVPIVNTSLVWPNGLTLDLETDLLYWADASRQKI 2592
Query: 393 DFCNYDGTGRQQVI 406
+ + GT R+ ++
Sbjct: 2593 ERSSLTGTNREVIV 2606
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 150/412 (36%), Gaps = 113/412 (27%)
Query: 28 CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCS------ 81
C LA C H LC + T + C CP G LS+DSV C EQP S
Sbjct: 1721 CALASCSH---LCLLSAQATRQYS-CACPSGWNLSDDSVNCV---RGEQPFLMSVRNSVI 1773
Query: 82 -------QMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK 134
++ +N I G+ +E+D+ S F+ +E
Sbjct: 1774 FGIPLDPEVKSNDAMVPIAGIQNGFDVEFDD--------SEQFIYW----------VENP 1815
Query: 135 GKDHRAQD-----IVVSGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--- 183
G+ HR + V + L L+ GLA DW+ ++Y+ S IEV G R
Sbjct: 1816 GEIHRVKTDGSNRTVFAPLSLLGSSYGLALDWVSRNLYYTTSASRSIEVVTLQGDTRYGK 1875
Query: 184 IVLAKD----NITQPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRSTIIST 235
++A D + P + LDP G L+W+D G N +I MDG++ + +
Sbjct: 1876 TLIANDGTPLGVGFPMSIALDPVRGK--LYWSDQGTNSGVPAKIASANMDGTSLKILFTG 1933
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
+ +TLDI +++Y+A + I+
Sbjct: 1934 NLEHLEVVTLDIQAQKLYWAVTSRGVIE-------------------------------- 1961
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
+ N+DG+ ILV L L L LYYS + IER+
Sbjct: 1962 --RGNVDGTERIILVH-HLAHPWGLALHGPFLYYSD------------EQYEVIERVDKF 2006
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+ I+ I GL RVY + D + C+ + QQ+ L
Sbjct: 2007 SGSNKVILRDNIPNLRGL-------RVYHRRNVADSSNGCSNNPNSCQQICL 2051
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 124/320 (38%), Gaps = 58/320 (18%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENG-TNRIVLAKDNI-TQPRGMMLDPSPGTRWLFW 210
GL+ D+ IY++D+ L+ IE CD +G + R V+A D + P + L ++W
Sbjct: 1619 GLSIDYPNRLIYFMDAYLDYIEFCDYDGHSRRQVIASDLVLRHPHALTLFEDS----VYW 1674
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL--- 267
TD ++ G N+S I+ I P G+ + I R + + C L
Sbjct: 1675 TDRATRRVMQANKWHGGNQS-IVMYSINQPLGI-IAIHPSRQPSSPNPCALASCSHLCLL 1732
Query: 268 EIKTNVNYSTIFRKLYWIDEGG---------------NGVPLKIGKANMDGSNASILVSG 312
+ YS + + + N V I SN +++
Sbjct: 1733 SAQATRQYSCACPSGWNLSDDSVNCVRGEQPFLMSVRNSVIFGIPLDPEVKSNDAMVPIA 1792
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPN 371
+ ++ ++ ++++W ENP I R+ DGSNR+ + +
Sbjct: 1793 GIQNGFDVEFDDS---------EQFIYWV---ENPGEIHRVKTDGSNRTVFAPLSLLGSS 1840
Query: 372 -GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVP----- 425
GL LD +R +Y+ S I+ G R + L+ ++G P
Sbjct: 1841 YGLALDWVSRNLYYTTSASRSIEVVTLQGDTR-----------YGKTLIANDGTPLGVGF 1889
Query: 426 --ALALDLENGMLYYSTEGA 443
++ALD G LY+S +G
Sbjct: 1890 PMSIALDPVRGKLYWSDQGT 1909
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 116/492 (23%), Positives = 187/492 (38%), Gaps = 123/492 (25%)
Query: 5 CVNLTKVCDGKTDCPNGAD-----------EGPG---CDLAECKHKFGLCSNT------- 43
C+ +CDG DC +G+D E P CD + C + LC+
Sbjct: 3871 CIQSFWICDGDNDCVDGSDEELHLCFNVPCEPPHRFRCDNSRCIYGHQLCNGVDDCGDGT 3930
Query: 44 ------CHPTPLGALCT-----CPPGEILSNDSVTCQDMNEC----EQPG---------- 78
C P CT C G +S V C ++++C ++ G
Sbjct: 3931 DEREEHCR-KPTHKPCTQTEYKCGNGNCISQHYV-CDNVDDCGDLSDESGCNLGENRTCA 3988
Query: 79 --YCSQMCTN-TKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIISN-------RHSIL 127
C Q CT + G +ICSC G+ D ++C+ IN F I + L
Sbjct: 3989 ENICEQNCTQLSNGGFICSCIPGFKSSTLDKNSCQDINECEQFGICPQSCRNSKGSYECL 4048
Query: 128 VADLEEKGKDHRAQDIVVSG----LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR 183
AD + H + G L L E + R+ + V E +
Sbjct: 4049 CADGFKSMDSHFGERCAADGDPPLLLLPENV--------------RIRKYNVSSEKFSE- 4093
Query: 184 IVLAKDNITQPRGMMLDPSP-GTRWLFWTDWGENPRIERIGM-------DGSN---RSTI 232
L ++ Q DP G +++T G+ I GSN R
Sbjct: 4094 -YLEEEEHIQTIDYDWDPEGIGLGVVYYTVLGQGSEFGAIKRAYIPDFESGSNNPIREVD 4152
Query: 233 ISTK-IYWPNGLTLDIATRRVYFADSKLDFIDCKSLE-------IKTNVNYS---TIFRK 281
+ K I P+GL +D R +Y++D+K I+ +L+ I T+++ + K
Sbjct: 4153 LGLKYIMQPDGLAVDWVGRHIYWSDAKSQRIEVATLDGRYRKWLITTDLDQPGAIVVNPK 4212
Query: 282 L---YWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDLENGMLYYSTLKCTR 336
L +W D+G KI A M+G + S+LVS L L++D N Y
Sbjct: 4213 LGLMFWTDQGKQP---KIESAWMNGEHRSVLVSEDLGWPNGLSIDYLNDDRIY------- 4262
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
W+D E+ IE I DG++R I++ + +LDI ++Y+ + + N
Sbjct: 4263 ---WSDSKED-VIETIKYDGTDRRLILNEAM---KPFSLDIFEDQLYWVAKEKGEVWRQN 4315
Query: 397 YDGTGRQQVILI 408
G G ++ +L+
Sbjct: 4316 KFGKGNKEKVLV 4327
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 125/335 (37%), Gaps = 79/335 (23%)
Query: 72 NECEQP-GYCSQMCTNTK--GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILV 128
N C Q G CS C + C+C G LE D +C FLI + +S+
Sbjct: 2361 NPCLQSNGGCSHFCFALPELSTPKCACAFG-ALENDGKSCATSRED--FLIYALNNSLRS 2417
Query: 129 ADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE-----VCDENGTNR 183
+ + Q++ V + L YD I++ +LN + V +GT+
Sbjct: 2418 LHFDPQDHSPPFQEMNVGRTAI--ALDYDRRNNRIFFT-QKLNSVSGQISYVSLYSGTSS 2474
Query: 184 IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
++ +I G+ D R ++++D+ N I + DGSNR+ I + P +
Sbjct: 2475 PIVLLSDIGIIDGIAFDWI--NRRIYYSDYS-NQTINSVAEDGSNRAVI--AHVPKPRAI 2529
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
LD R Y +YW D G N KI +A + G
Sbjct: 2530 VLDPC--RGY----------------------------MYWTDWGTNA---KIERATLAG 2556
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+ +V+ L NG+ L+W D +IER + G+NR I+
Sbjct: 2557 NFRVPIVNTSLV------WPNGLTLDLETD---LLYWAD-ASRQKIERSSLTGTNREVIV 2606
Query: 364 STK------------IYWPNGLTLDIATRRVYFAD 386
ST IYW D TR++Y A+
Sbjct: 2607 STAFNSFGLTVYGQYIYW-----TDYFTRKIYRAN 2636
>gi|148695088|gb|EDL27035.1| mCG129621 [Mus musculus]
Length = 4105
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/301 (41%), Positives = 167/301 (55%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ +CDG DCPNG DE P C+ C H G C++ C P GA C CP G L+ND
Sbjct: 1326 CVNLSALCDGVFDCPNGTDESPLCNQDSCLHFNGGCTHRCIQGPFGATCVCPIGYQLAND 1385
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
+ TC+D+NEC+ PG+CSQ C N +GS+ C+C+ Y LE D TCK L++++R
Sbjct: 1386 TKTCEDVNECDIPGFCSQHCVNMRGSFRCACDPEYTLESDGRTCKVTASENLLLVVASRD 1445
Query: 125 SI--------------LVADLE----------------------------EKGKDHRAQD 142
I LV D+ + G D R
Sbjct: 1446 KIIMDNITAHTHNIYSLVQDVSFVVALDFDSVTGRVFWSDLLEGKTWSAFQNGTDKRV-- 1503
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ SGL L E +A DWIG +IYW D L IEV +G++R VL N+T+PRG+ LDP
Sbjct: 1504 VHDSGLSLTEMIAVDWIGRNIYWTDYTLETIEVSKIDGSHRTVLISKNVTKPRGLALDPR 1563
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +FW+DWG +PRIER MDG+ R+ I+ KIYWP GL++D R +YF D+ LD+I
Sbjct: 1564 MGDNVMFWSDWGHHPRIERASMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYI 1623
Query: 263 D 263
+
Sbjct: 1624 E 1624
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/343 (37%), Positives = 177/343 (51%), Gaps = 63/343 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCS-----NTCHPTPLGALCTCPPG 58
RC+++ KVCDG DCP G DE C GLCS CH TP G C CPPG
Sbjct: 277 RCISMDKVCDGVPDCPEGEDENNATSGRYCG--TGLCSILNCEYQCHQTPYGGECFCPPG 334
Query: 59 EIL-SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I+ SNDS TC D ++C+ G C Q C + +G + C C EGY+LE H + SAA
Sbjct: 335 HIINSNDSRTCIDFDDCQIWGICDQKCESRQGRHQCLCEEGYILERGQHCKSNDSFSAAS 394
Query: 118 LIISNRHSILVADLEEKG--------------------KDHRA----------------- 140
+I SN +LV DL + + HR
Sbjct: 395 IIFSNGRDLLVGDLHGRNFRILAESKNRGIVMGVDFHYQKHRVFWTDPMQAKVFSTDING 454
Query: 141 ---QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
Q+I+ +D E LA DWI +Y +++R+NRI+V + G R+ L +N+ PRG+
Sbjct: 455 LNTQEILNVSIDAPENLAVDWINNKLYLVETRVNRIDVVNLEGNQRVTLITENLGHPRGI 514
Query: 198 MLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
LDP+ G +LF++DWG P++ER MDGSNR +++TK+ WP G+TLD+ ++RVY+
Sbjct: 515 ALDPTVG--YLFFSDWGSLSGQPKVERAFMDGSNRKDLVTTKLGWPAGITLDLVSKRVYW 572
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
DS+ D+I+ V Y I RK + GG+ VP G
Sbjct: 573 VDSRYDYIE--------TVTYDGIQRKT--VARGGSLVPHPFG 605
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 171/364 (46%), Gaps = 55/364 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + VC+ DC + +DE GC + EC+ C + C T C+C PG L
Sbjct: 3088 HCIEMGTVCNHVDDCSDNSDE-KGCGINECQDSSISHCDHNCTDTITSFYCSCLPGYKLM 3146
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P CSQ C N GSYIC C GY+ E D +C+ ++ +L+ S
Sbjct: 3147 SDKRTCVDIDECKETPQLCSQKCENVIGSYICKCAPGYIREPDGKSCRQNSNIEPYLVFS 3206
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
NR+ I + D + +++ GL V L +D + +YW+D+ IE N T
Sbjct: 3207 NRYYIRNLTI-----DGTSYSLILQGLGNVVALDFDRVEERLYWIDAEKQIIERMFLNKT 3261
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
N+ + + + + +D +R+++W DWG++ I RIGMDG+N++ IISTKI WPN
Sbjct: 3262 NQETIISHRLRRAESLAVDWV--SRYVYWADWGDHAYIARIGMDGTNKTVIISTKIEWPN 3319
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+T+D +Y+AD+ L +I+ LE
Sbjct: 3320 AITIDYTNDLLYWADAHLGYIEFSDLE--------------------------------- 3346
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
G + + G L AL ++ T +FWTDW + DGS R
Sbjct: 3347 -GHHRHTVYDGTLPHPFAL-----TIFEDT------VFWTDWNTRTVEKGNKYDGSGRVV 3394
Query: 362 IIST 365
+++T
Sbjct: 3395 LVNT 3398
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 124/255 (48%), Gaps = 50/255 (19%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I++S + + +G+A+DWI IY+ D I E+G+NR V+A+ +++PR ++LDP
Sbjct: 2461 ILLSNIGVTDGIAFDWINRRIYYSDFSNQTINSMAEDGSNRAVIAR--VSKPRAIVLDPC 2518
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWG N +IER + G+ R I++T + WPNGLTLD+ T +Y+AD+ L
Sbjct: 2519 RG--YMYWTDWGTNAKIERATLGGNFRVPIVNTSLVWPNGLTLDLETDLLYWADASLQ-- 2574
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
KI ++ + GSN +++S +
Sbjct: 2575 --------------------------------KIERSTLTGSNREVVISTAFHSF----- 2597
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G+ Y ++++WTD+ DGS+ + + P+G++ + T++
Sbjct: 2598 --GLTVYG-----QYIYWTDFYTKKIYRANKYDGSDLIAMTTRLPTQPSGISTVVKTQQQ 2650
Query: 383 YFADSKLDFIDFCNY 397
++ F C++
Sbjct: 2651 QCSNPCDQFNGGCSH 2665
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 108/238 (45%), Gaps = 57/238 (23%)
Query: 77 PGYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NR 123
P C Q+C G + C+C G+ L D +C N +F+++S +
Sbjct: 2027 PNACQQICLPVPGGMFSCACASGFKLSPDGRSCSPYN---SFIVVSMLPAVRGFSLELSD 2083
Query: 124 HSILVADLEEKGKDHRAQDIVVS------------------------------------- 146
HS + + +G++ D+ V+
Sbjct: 2084 HSEAMVPVAGQGRNVLHADVDVANGFIYWCDFSSSVRSSNGIRRIKPNGSNFTNIVTYGI 2143
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
G + + G+A DW+ G++Y+ ++ + IEV N T R VL K ++ PR +++DP
Sbjct: 2144 GANGIRGVAVDWVAGNLYFTNAFVYETLIEVIRINTTYRRVLLKVSVDMPRHIVVDPK-- 2201
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
R+LFW D+G+ P+IER +D +NR+ ++S I P GL +D T +Y+ D LD I
Sbjct: 2202 HRYLFWADYGQKPKIERSFLDCTNRTVLVSEGIVTPRGLAVDHDTGYIYWVDDSLDII 2259
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 77/133 (57%), Gaps = 13/133 (9%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+++ + +LYWID I + ++ +N ++S +L A +L ++
Sbjct: 3234 LDFDRVEERLYWID----AEKQIIERMFLNKTNQETIISHRLRRAESLAVD--------- 3280
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
+R+++W DWG++ I RIGMDG+N++ IISTKI WPN +T+D +Y+AD+ L +I
Sbjct: 3281 WVSRYVYWADWGDHAYIARIGMDGTNKTVIISTKIEWPNAITIDYTNDLLYWADAHLGYI 3340
Query: 393 DFCNYDGTGRQQV 405
+F + +G R V
Sbjct: 3341 EFSDLEGHHRHTV 3353
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 140/314 (44%), Gaps = 67/314 (21%)
Query: 78 GYCSQMCT------NTKGSYICSCNEGYVLEYDNHTCKAINH------------------ 113
G C+Q+C N Y C C G+ L+ D H C A+ +
Sbjct: 667 GGCAQICVLSHRTDNGGLGYRCKCKFGFELDADEHHCVAVKNFLLFSSQTAVRGIPFTLS 726
Query: 114 -----------SAAFLI---ISNRHS-ILVADLE-----EKGKDHRAQDIVVSG-LDLVE 152
S +F + +HS I +DL ++ D ++++ + L VE
Sbjct: 727 TQEDVMVPVTGSPSFFVGIDFDAQHSTIFYSDLSKNIIYQQKIDGTGKEVITANRLQNVE 786
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
L++DWI ++YW D + V + + R +++ N+ PR +++ P+ G ++F +
Sbjct: 787 CLSFDWISRNLYWTDGGSKSVTVMKLADKSRRQIIS--NLNNPRSIVVHPAAG--YMFLS 842
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKLDFID 263
DW +I R DGS+ I++T + WPNGL +D +T R+Y+ D S LD +D
Sbjct: 843 DWFRPAKIMRAWSDGSHLMPIVNTSLGWPNGLAIDWSTSRLYWVDAFFDKIEHSNLDGLD 902
Query: 264 CKSLEIKTNVNYS---TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG----QLYE 316
K L + + T+F+ ++ + G +++ K+ DG + +++ G +
Sbjct: 903 RKRLGHVDQMTHPFGLTVFKDNVFLTDWRLGAIIRVRKS--DGGDMTVVRRGISSIMHVK 960
Query: 317 ALALDLENGMLYYS 330
A DL+ G Y S
Sbjct: 961 AYDADLQTGTNYCS 974
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 15/142 (10%)
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
++ + + + I R++Y+ D I DGSN +++ A+ LD
Sbjct: 2464 SNIGVTDGIAFDWINRRIYYSDFSNQ----TINSMAEDGSNRAVIARVSKPRAIVLD--- 2516
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384
C +++WTDWG N +IER + G+ R I++T + WPNGLTLD+ T +Y+
Sbjct: 2517 --------PCRGYMYWTDWGTNAKIERATLGGNFRVPIVNTSLVWPNGLTLDLETDLLYW 2568
Query: 385 ADSKLDFIDFCNYDGTGRQQVI 406
AD+ L I+ G+ R+ VI
Sbjct: 2569 ADASLQKIERSTLTGSNREVVI 2590
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 29/186 (15%)
Query: 242 GLTLDIATRRVYFAD--------SKLD-----FIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
G+ D ++++D K+D I L+ +++ I R LYW D G
Sbjct: 744 GIDFDAQHSTIFYSDLSKNIIYQQKIDGTGKEVITANRLQNVECLSFDWISRNLYWTDGG 803
Query: 289 GNGVP-LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
V +K+ D S I+ + ++ + G ++F +DW
Sbjct: 804 SKSVTVMKLA----DKSRRQIISNLNNPRSIVVHPAAG-----------YMFLSDWFRPA 848
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+I R DGS+ I++T + WPNGL +D +T R+Y+ D+ D I+ N DG R+++
Sbjct: 849 KIMRAWSDGSHLMPIVNTSLGWPNGLAIDWSTSRLYWVDAFFDKIEHSNLDGLDRKRLGH 908
Query: 408 IDLMVE 413
+D M
Sbjct: 909 VDQMTH 914
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 75/161 (46%), Gaps = 16/161 (9%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAE---CKHKFGLCSNTCHPTPLGA-LCTCPPGEI 60
CV+ VCD DC + +DE GC+L E C K +C C G +C+C PG
Sbjct: 3891 CVSQHYVCDNVDDCGDLSDE-TGCNLGENRTCAEK--ICEQNCTQLSNGGFICSCRPGFK 3947
Query: 61 LSN-DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY--VLEYDNHTCKAINHSAAF 117
S D +CQD+NECE+ G C Q C N+KGSY C C +G+ + + C A
Sbjct: 3948 PSTLDKNSCQDINECEEFGICPQSCRNSKGSYECFCVDGFKSMSTHYGERCAADGSPPLL 4007
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDW 158
L+ N EK ++ ++ + +D YDW
Sbjct: 4008 LLPENVRIRKYNISSEKFSEYLEEEEHIQAID------YDW 4042
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 93/237 (39%), Gaps = 48/237 (20%)
Query: 213 WGENP-RIERIGMDGSNRSTII-STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DGSNR+ + + GL LD +R +Y+ I+ +L
Sbjct: 1795 WVENPGEIHRVKTDGSNRTAFAPLSLLGSSLGLALDWVSRNIYYTTPASRSIEVLTLRGD 1854
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
T + I +G PL +G +A+D G LY+S
Sbjct: 1855 TRYGKTLI---------TNDGTPLGVG----------------FPVGIAVDPACGKLYWS 1889
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 390
TD G +I MDG++ + + + +TLDI +++Y+A +
Sbjct: 1890 D-------HGTDSGVPAKIASANMDGTSLKILFTGNMEHLEVVTLDIQEQKLYWAVTSRG 1942
Query: 391 FIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I+ N DGT R +IL+ + L + LYYS E E ++
Sbjct: 1943 VIERGNVDGTER--MILVHHLAH------------PWGLVVHGSFLYYSDEQYEVIE 1985
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 130/310 (41%), Gaps = 36/310 (11%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNI-TQPRGMMLDPSPGTRWLFW 210
GL+ D+ IY++D+ L+ IE CD +G N R V+A D + P + L +FW
Sbjct: 1603 GLSIDYPNRLIYFMDAYLDYIEFCDYDGQNRRQVIASDLVLHHPHALTLFEDS----VFW 1658
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
TD G + ++ G N+S ++ + + P G+ + I R + + C L +
Sbjct: 1659 TDRGTHQVMQANKWHGRNQSVVMYS-VPQPLGI-IAIHPSRQPSSPNPCASATCSHLCLL 1716
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ--LYEALALDLE----N 324
+ ++ +G L N + L+S + + ++LD E +
Sbjct: 1717 ------SAQEPRHYSCACPSGWNLSDDSVNCVRGDQPFLISVRENVIFGISLDPEVKSND 1770
Query: 325 GMLYYSTLKCTRWLFWTD------WGENP-RIERIGMDGSNRSTII-STKIYWPNGLTLD 376
M+ S ++ + + D W ENP I R+ DGSNR+ + + GL LD
Sbjct: 1771 AMVPISGIQHGYDVEFDDSEQFIYWVENPGEIHRVKTDGSNRTAFAPLSLLGSSLGLALD 1830
Query: 377 IATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND--LMGDNGVPALALDLENG 434
+R +Y+ I+ G R LI TND +G +A+D G
Sbjct: 1831 WVSRNIYYTTPASRSIEVLTLRGDTRYGKTLI------TNDGTPLGVGFPVGIAVDPACG 1884
Query: 435 MLYYSTEGAE 444
LY+S G +
Sbjct: 1885 KLYWSDHGTD 1894
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 95/262 (36%), Gaps = 67/262 (25%)
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNR---IVLAKD----NITQPRGMMLDPSPGTRWLF 209
DW+ +IY+ IEV G R ++ D + P G+ +DP+ G L+
Sbjct: 1830 DWVSRNIYYTTPASRSIEVLTLRGDTRYGKTLITNDGTPLGVGFPVGIAVDPACGK--LY 1887
Query: 210 WTDWGEN----PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
W+D G + +I MDG++ + + + +TLDI +++Y+A + I+
Sbjct: 1888 WSDHGTDSGVPAKIASANMDGTSLKILFTGNMEHLEVVTLDIQEQKLYWAVTSRGVIE-- 1945
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
+ N+DG+ ILV L L +
Sbjct: 1946 --------------------------------RGNVDGTERMILVH-HLAHPWGLVVHGS 1972
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
LYYS + IER+ + + I + GL RVY
Sbjct: 1973 FLYYSD------------EQYEVIERVDKSSGSNKVVFRDNIPYLRGL-------RVYHH 2013
Query: 386 DSKLDFIDFCNYDGTGRQQVIL 407
+ D + C+ + QQ+ L
Sbjct: 2014 RNAADSSNGCSNNPNACQQICL 2035
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 107/494 (21%), Positives = 171/494 (34%), Gaps = 98/494 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALC----TCPPGEI 60
C+ + VCD DC +GADE C C + CSN P+ C CP G
Sbjct: 80 CIPSSWVCDQDKDCSDGADEQQNCPGTTCSSQQLTCSNG-QCVPIEYRCDHVSDCPDGSD 138
Query: 61 LSN------DSVTCQD------MNECEQPGYCSQMCTNTKGSYICSCNE----------- 97
N D +TC + +C+ C + +CS E
Sbjct: 139 ERNCYYPTCDQLTCANGACYNTSQKCDHKVDCRDSSDEANCTTLCSQKEFQCGSGECILR 198
Query: 98 GYVLEYDN--------HTCKAINHSAAFLIISNRHSI---LVADLEEKGKDHRAQDIVVS 146
YV ++DN H C SN I V D ++ +D +D S
Sbjct: 199 AYVCDHDNDCEDNSDEHNCNYDTCGGHQFTCSNGQCINQNWVCDGDDDCQDSGDEDGCES 258
Query: 147 GLDLVEGLAYDWI---GGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR--GMMLDP 201
+W G +D + + C E ++N T R G L
Sbjct: 259 NQRHHTCYPREWACPGSGRCISMDKVCDGVPDCPEGED------ENNATSGRYCGTGL-- 310
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
+ + T + + P G ++ R + +DF
Sbjct: 311 -----------------CSILNCEYQCHQTPYGGECFCPPGHIINSNDSR-----TCIDF 348
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS---------- 311
DC+ I S R +EG + K+N S ASI+ S
Sbjct: 349 DDCQIWGICDQKCESRQGRHQCLCEEGYILERGQHCKSNDSFSAASIIFSNGRDLLVGDL 408
Query: 312 -GQLYEALALDLENGMLYYSTLKCTRW-LFWTDWGENPRIERIGMDGSNRSTIISTKIYW 369
G+ + LA G++ + +FWTD + ++ ++G N I++ I
Sbjct: 409 HGRNFRILAESKNRGIVMGVDFHYQKHRVFWTDPMQ-AKVFSTDINGLNTQEILNVSIDA 467
Query: 370 PNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALAL 429
P L +D ++Y +++++ ID N +G Q+V LI T +L G+ AL
Sbjct: 468 PENLAVDWINNKLYLVETRVNRIDVVNLEGN--QRVTLI------TENLGHPRGI---AL 516
Query: 430 DLENGMLYYSTEGA 443
D G L++S G+
Sbjct: 517 DPTVGYLFFSDWGS 530
>gi|405959325|gb|EKC25376.1| Prolow-density lipoprotein receptor-related protein 1 [Crassostrea
gigas]
Length = 3542
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 173/299 (57%), Gaps = 42/299 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+N TKVCDG DCPNG DE P C+ EC + G C+ C TP GA C CP G++L N
Sbjct: 482 CINRTKVCDGNADCPNGDDESPICNTDECGVENGHCNFLCIQTPRGAECVCPVGQVL-NG 540
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA-INHSAAFLIISNR 123
+ C D NEC+ PG CSQ C NTKGS+ C+C+ GY L + TC A N + +L+++++
Sbjct: 541 TKECVDDNECDPPGKCSQHCINTKGSFKCTCDPGYEL-VNQTTCLANRNETKPYLLVTSQ 599
Query: 124 HSILVADLE--------------------EKGKDH-------------------RAQDIV 144
++ A L+ K H ++
Sbjct: 600 EDLMKAGLDVMELSNIQLPGIKALAGLDVHVEKQHVYFSDSSLKKIFRVNADGSNLTEVF 659
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
G+++VE LA DWIGG++YW D + IEV +G+ + +L +NIT PRG+ +DP G
Sbjct: 660 QVGVNVVEDLAVDWIGGNLYWNDYVVETIEVAKLDGSMKTILFSENITNPRGIEVDPRSG 719
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
R+LFWTDWG+NP+IER GMDG R IIS +YWPNGLTLD RR+YF D++LDFI+
Sbjct: 720 ARYLFWTDWGQNPKIERSGMDGIGRKVIISENLYWPNGLTLDYPNRRLYFTDARLDFIE 778
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 197/448 (43%), Gaps = 101/448 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKF-GLCSNTCHPTPLGALCTCPPGEILS 62
+C++ VC+ + DC + +DE C++ EC+ C + C T +C C PG L
Sbjct: 2110 KCIDYKLVCNKEYDCEDESDENK-CNVNECESILTNNCEHKCRDTITSFVCECDPGYKLQ 2168
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D +C+D+NEC E PG CSQ C N+ G+Y C C G+ E + +CK ++ +LI +
Sbjct: 2169 TDKKSCEDINECTEVPGSCSQTCINSPGNYTCKCENGFKKEINGRSCKKTDNVTPWLIFT 2228
Query: 122 NRHSILVADLEEKGKDHR----------------------------------------AQ 141
N++ I +L GK++R +
Sbjct: 2229 NKYYI--RELSTDGKNYRRVSQGFDNVVGFDFDYREDRMYFTDVRAKKMYRMHLNGTNKE 2286
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ-PRGMMLD 200
IV + EGLA DWIG +YW+DSR I V + NGT+R+ L K + PR ++D
Sbjct: 2287 VIVRHSMLGAEGLAVDWIGRKVYWVDSRKQSIYVTEMNGTSRLTLFKGGFMKNPRAFVVD 2346
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G + +WTDW P I IGM+G N S +I+ K+ WPN L +DI R+++ D+ LD
Sbjct: 2347 PIRG--YAYWTDWAVTPYIGCIGMNGINASKVITNKLGWPNALAVDIVNGRLWWGDAHLD 2404
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
+I+ AN DG+N I++ G++ A+
Sbjct: 2405 YIE----------------------------------YANTDGTNRHIVMQGKVPHPFAI 2430
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW + G+N T++ + P +DI
Sbjct: 2431 TLFEDFMY-----------WTDWNHKSVEKANRFTGANH-TVLQHVTHRP----MDI--- 2471
Query: 381 RVYFADSKLDFIDFCNYDGTGRQQVILI 408
+Y + I+ C + G + LI
Sbjct: 2472 HIYHPLQQPKGINPCGNNNGGCSHLCLI 2499
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 112/218 (51%), Gaps = 36/218 (16%)
Query: 221 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV---NYST 277
+ G+D S I I GL + + + VYF+DS L I + N N +
Sbjct: 604 KAGLDVMELSNIQLPGIKALAGLDVHVEKQHVYFSDSSLKKI------FRVNADGSNLTE 657
Query: 278 IFR----------------KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
+F+ LYW D V I A +DGS +IL S + ++
Sbjct: 658 VFQVGVNVVEDLAVDWIGGNLYWNDY----VVETIEVAKLDGSMKTILFSENITNPRGIE 713
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 381
++ R+LFWTDWG+NP+IER GMDG R IIS +YWPNGLTLD RR
Sbjct: 714 VD-------PRSGARYLFWTDWGQNPKIERSGMDGIGRKVIISENLYWPNGLTLDYPNRR 766
Query: 382 VYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLM 419
+YF D++LDFI+FCNYDG+GR++V D + +DL+
Sbjct: 767 LYFTDARLDFIEFCNYDGSGRRKVFANDHFLRHPHDLV 804
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 181/431 (41%), Gaps = 98/431 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSNTCHPTP-LGALCTCPPG 58
RC+N T VCD DC + +DE GC C G C + C G LC+C PG
Sbjct: 2958 RCINATGVCDSVDDCGDHSDE-LGCHKTSGHVNCSVDNGGCDHNCTDLKGSGYLCSCKPG 3016
Query: 59 EILSNDSVTCQDMNECEQPG-YCSQMCTNTKGSYICSCNEGYV-LEYDNHTCKAINHSAA 116
+S++ TC+D++EC G C MC N KGS+ C C G+ ++ CKA +
Sbjct: 3017 YQISSNKKTCEDVDECVTWGNQCPHMCHNVKGSFKCMCYAGFSDVKGKGTVCKAEGMTTV 3076
Query: 117 FLIISNRHSILVADLEEKG-----------------------------KDHRA------- 140
F + ++ D +E K RA
Sbjct: 3077 FFTTGHEIRQIILDRKEYSGTVNSGQYLGGIDVDMSRKLIYWTDTSMKKIRRAGIPRNMK 3136
Query: 141 --QDIVVSGLDLV----EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
+ V L+++ E +A DW+ +IYW DS N I V +G +L ++++ P
Sbjct: 3137 ADSETVPQDLNIMTYQPEDVAIDWVARNIYWTDSAHNTISVAKSDGRYAKILIRNDLQFP 3196
Query: 195 RGMMLDPSPGTRWLFWTDW-GENPRIERIGMDGSNRSTIISTKIYWPNGLTL-DIATRRV 252
+ ++ G W++WTD G P+IER M+G +R ++ST++ P GL + D RV
Sbjct: 3197 LAIAVNSKLG--WMYWTDASGSFPKIERAWMNGEHREELVSTRLGRPTGLAIDDHMNDRV 3254
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
++ DSK + I+ N DGS+ I++
Sbjct: 3255 FWCDSKENLIE----------------------------------SMNADGSDRVIVIGK 3280
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII---STKIYW 369
+ +++D+ LY+++ + + + +G G++ + ++ ++ S KI+
Sbjct: 3281 GIINPISVDVFESTLYWASQQTGKLMTMDKFGR-------GVNVTLQAGLLLPSSLKIFH 3333
Query: 370 PNGLTLDIATR 380
P + + R
Sbjct: 3334 PQRHNMTVKNR 3344
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 145/319 (45%), Gaps = 66/319 (20%)
Query: 141 QDIVVSGLDL-----VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
++IVV G+ + ++G+A DWI G + E+CD +G+ +D P
Sbjct: 1312 EEIVVDGIGIKSGEGIKGIAVDWIAGMKFIFHQLQ---ELCDLHGS-----EQDEWNPP- 1362
Query: 196 GMMLDPSPGTRWLFWT------DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
D PG R + G+ P+IER +DGSNR+ ++ I +P G+T+DI T
Sbjct: 1363 ---YDIVPGERGYSKSSGCQPHQKGQFPKIERSHLDGSNRTVLVKHGIIYPRGITIDITT 1419
Query: 250 RRVYFADSKLDFIDCKSLE------IKTNVN--YSTIFRK--LYWIDEGGNGVPLKIGKA 299
VY+ DS++D I S +K+N+ + + +YW+D V + +
Sbjct: 1420 HEVYWVDSRVDAIQKMSFSGGNRKYVKSNLPSPFGIAIKDDYMYWVDRNLKKVGILMYFQ 1479
Query: 300 NMDGS--NASILVSGQLYEALALDLENGMLYYSTL------------------------- 332
+ + S + E LA+D +Y+S +
Sbjct: 1480 VIANYFWHGSPRANSATAEGLAVDWVGKKVYWSDVFTGQIMSMTLNKTHKTPLSHVATPR 1539
Query: 333 -----KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 387
C LFWTDW +P+IER M G+ R TI+ T + WPNGL++D +Y+AD+
Sbjct: 1540 AVAVHPCQGLLFWTDW-THPKIERSTMAGNLRKTIVKTDLGWPNGLSIDYDEDMIYWADA 1598
Query: 388 KLDFIDFCNYDGTGRQQVI 406
D I+ N++G R+ ++
Sbjct: 1599 LRDRIERANFNGQYREIIV 1617
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 18/180 (10%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EGLA DW+G +YW D +I N T++ L+ ++ PR + + P G LFW
Sbjct: 1497 AEGLAVDWVGKKVYWSDVFTGQIMSMTLNKTHKTPLS--HVATPRAVAVHPCQGL--LFW 1552
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID------- 263
TDW +P+IER M G+ R TI+ T + WPNGL++D +Y+AD+ D I+
Sbjct: 1553 TDW-THPKIERSTMAGNLRKTIVKTDLGWPNGLSIDYDEDMIYWADALRDRIERANFNGQ 1611
Query: 264 CKSLEIKTNVN-YS-TIF-RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
+ + +++ V+ YS T+F +YW D +GV G+N ++V G L + +
Sbjct: 1612 YREIIVQSTVHPYSMTVFGHYVYWTDWTLHGV---YRAEKHTGANMVVMVEGILNRPMGI 1668
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 111/479 (23%), Positives = 193/479 (40%), Gaps = 117/479 (24%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+RC+ ++CD +C +G+DE +L C KFG C N C G S
Sbjct: 2913 NRCIPRWRLCDKVDNCGDGSDEN---NLDLCGEKFGHC-NASQFKCANKRCINATGVCDS 2968
Query: 63 -------NDSVTCQD----MNECEQPGYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKA 110
+D + C +N G C CT+ KGS Y+CSC GY + + TC+
Sbjct: 2969 VDDCGDHSDELGCHKTSGHVNCSVDNGGCDHNCTDLKGSGYLCSCKPGYQISSNKKTCED 3028
Query: 111 INHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL 170
++ + N+ + +++ K + +G V+G
Sbjct: 3029 VDECVTW---GNQCPHMCHNVKGSFKC-----MCYAGFSDVKG----------------- 3063
Query: 171 NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS 230
K + + GM +F+T E I +I +D S
Sbjct: 3064 -----------------KGTVCKAEGMTT--------VFFTTGHE---IRQIILDRKEYS 3095
Query: 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFI---------DCKSLEIKTNVNYST---- 277
+++ Y G+ +D++ + +Y+ D+ + I S + ++N T
Sbjct: 3096 GTVNSGQYL-GGIDVDMSRKLIYWTDTSMKKIRRAGIPRNMKADSETVPQDLNIMTYQPE 3154
Query: 278 ------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYST 331
+ R +YW D N + + A DG A IL+ L LA+ + + +
Sbjct: 3155 DVAIDWVARNIYWTDSAHNTISV----AKSDGRYAKILIRNDLQFPLAIAVNSKL----- 3205
Query: 332 LKCTRWLFWTDW-GENPRIERIGMDGSNRSTIISTKIYWPNGLTL-DIATRRVYFADSKL 389
W++WTD G P+IER M+G +R ++ST++ P GL + D RV++ DSK
Sbjct: 3206 ----GWMYWTDASGSFPKIERAWMNGEHREELVSTRLGRPTGLAIDDHMNDRVFWCDSKE 3261
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKT 448
+ I+ N DG+ R VI+I G + +++D+ LY++++ L T
Sbjct: 3262 NLIESMNADGSDR--VIVI-----------GKGIINPISVDVFESTLYWASQQTGKLMT 3307
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 125/322 (38%), Gaps = 77/322 (23%)
Query: 69 QDMNECEQPGYCSQMC---TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI------ 119
QD N C CS +C + + Y C+C G L D TC+ + I
Sbjct: 857 QDTNPCAS-ASCSHLCLLSADKRSGYSCACPVGMNLNSDGSTCREVTQEYLVYITKTGLV 915
Query: 120 --------------ISNRHSILVADLE------------------------EKGKDHRAQ 141
IS++ ++L D + E GK
Sbjct: 916 GLSLNNNTIHDVLPISSKQNVLDVDFDTLNKTMYIVQSPEVGNSSVKAISIETGKIKEMN 975
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN--RIVLAKD-----NITQP 194
+ SG +A DWI ++YW D IEV +G N R VL + + +P
Sbjct: 976 PTLFSGS--PRAIAVDWIARNLYWTDDESGTIEVMRMDGENHFRKVLLSNTGKNYDCARP 1033
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIG---MDGSNRSTIISTKIYWPNGLTLDIATRR 251
++LDP G L++ D G N +IG + GSN ++ ++ P +T+D T
Sbjct: 1034 VSLVLDPDHGK--LYYADQGGNGLPSKIGGMSLSGSNPFVVLQRRVEKPEYITMDRNTET 1091
Query: 252 VYFADSKLDFI---DCKSLEIKTNVNYST------IFR-KLYWID---EGGNGVPLKI-- 296
+Y+ DS +I + + +N+ + +FR KLY++D E +PL
Sbjct: 1092 LYWTDSGRQWIMRCGIRPRSVTVFLNHLSHPRGIAVFRDKLYYVDADFESIFSLPLNSPN 1151
Query: 297 GKANMDGSNASILVSGQLYEAL 318
K + +N +L ++Y L
Sbjct: 1152 AKKQVVKTNIVMLHGLKIYRQL 1173
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
++P I R DG+N + I ++ WPNGL++D T R+++ D+ D I N+DG +
Sbjct: 2 QSPYIARTFGDGTNMTKIRKYELGWPNGLSIDFHTDRLFWVDAYFDRIQHSNFDGEDVKT 61
Query: 405 VILIDLMVEF 414
+ + + F
Sbjct: 62 ITGVSIAHPF 71
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 27/130 (20%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNA--SILVS--GQLYE-----ALALDLENGMLY 328
I R LYW D+ + + MDG N +L+S G+ Y+ +L LD ++G LY
Sbjct: 991 IARNLYWTDDESGTIEV----MRMDGENHFRKVLLSNTGKNYDCARPVSLVLDPDHGKLY 1046
Query: 329 YSTLKCTRWLFWTDWGENPRIERIG---MDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
Y+ D G N +IG + GSN ++ ++ P +T+D T +Y+
Sbjct: 1047 YA-----------DQGGNGLPSKIGGMSLSGSNPFVVLQRRVEKPEYITMDRNTETLYWT 1095
Query: 386 DSKLDFIDFC 395
DS +I C
Sbjct: 1096 DSGRQWIMRC 1105
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
IV + L GL+ D+ IYW D+ +RIE + NG R ++ + + P M +
Sbjct: 1573 IVKTDLGWPNGLSIDYDEDMIYWADALRDRIERANFNGQYREIIVQSTV-HPYSMTV--- 1628
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
+++WTDW + G+N ++ + P G+T+ + RR
Sbjct: 1629 -FGHYVYWTDWTLHGVYRAEKHTGANMVVMVEGILNRPMGITV-FSPRR 1675
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
++P I R DG+N + I ++ WPNGL++D T R+++ D+ D I
Sbjct: 2 QSPYIARTFGDGTNMTKIRKYELGWPNGLSIDFHTDRLFWVDAYFDRI 49
>gi|344268384|ref|XP_003406040.1| PREDICTED: low-density lipoprotein receptor-related protein 2
[Loxodonta africana]
Length = 4643
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 124/300 (41%), Positives = 169/300 (56%), Gaps = 42/300 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ +CD DCPNGADE P C+ C C++ C P GA C CP G +L ND
Sbjct: 1317 CVNLSALCDSTPDCPNGADESPVCNQLSCSENNAGCTHECIQGPFGAECLCPVGFLLGND 1376
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D+NEC+ PG+CSQ C N +G++ C C+ GYVLE D TC+A + L++++++
Sbjct: 1377 SRTCEDINECDFPGFCSQHCHNMRGAFRCWCDAGYVLEGDGRTCRAQALDSLLLLVASQN 1436
Query: 125 SILVAD-----------LEEKGKDHRAQD------------------------------I 143
++VAD L + G A D +
Sbjct: 1437 -LIVADNITSQIHNIYPLVQNGSHIVAVDFDSISGRIFWSDVTQDKIWSAFQNGTDRKVV 1495
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ SG+ + E +A DW+G ++YW DS L I +G+ R VL NIT PRG+ LDP
Sbjct: 1496 LDSGITMTESIAIDWVGRNLYWTDSALETILASKMDGSYRTVLISKNITNPRGLALDPRI 1555
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
LFW+DWG +PRIER MDGS R+ I+ KIYWPNGLT+D + R +YF D+ LD+ID
Sbjct: 1556 DDHLLFWSDWGHHPRIERASMDGSMRTVIVQDKIYWPNGLTIDYSNRLIYFTDAYLDYID 1615
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 160/312 (51%), Gaps = 51/312 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ + K+C+ DC + +DE GC + EC C C T C+C PG L +
Sbjct: 3078 CIEMGKICNHLDDCTDNSDEK-GCGINECNDPSISGCDQNCTDTQTSFYCSCRPGYKLMS 3136
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC E P CSQ C NT GSYIC C GY+ E D +C+ ++ +LI SN
Sbjct: 3137 DKRTCDDIDECKEMPSVCSQKCENTMGSYICKCARGYIREPDGKSCRQNSNITPYLIFSN 3196
Query: 123 RH------------SILV--------------------ADLEEKGKDH------RAQDIV 144
R+ SI++ AD E K + + ++
Sbjct: 3197 RYYLRKLAIDGEYYSIILQGLGNAVAFDFDRVENRLYWADTERKVIERMFLNATNRETVI 3256
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPRG 196
GL VEGLA DW+ +YWLD+ L+ + V D NG LA+D + PRG
Sbjct: 3257 SHGLPAVEGLAVDWVTRKLYWLDAELDGLFVSDLNGRFLRQLAEDCVDVNNTFCFENPRG 3316
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
++L P G ++WTDWG I RIGMDG+N+S IISTKI WPNG+T+D R+Y+AD
Sbjct: 3317 IVLHPQYGH--VYWTDWGHRAYIGRIGMDGTNKSVIISTKIEWPNGITIDYTNDRLYWAD 3374
Query: 257 SKLDFIDCKSLE 268
+ L +I+ LE
Sbjct: 3375 AHLGYIEYSDLE 3386
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 132/478 (27%), Positives = 224/478 (46%), Gaps = 108/478 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+C+ L K+CDG DCP G DE G C+++ C C C +P G +C CP G
Sbjct: 270 QCIPLEKLCDGTPDCPGGEDETNIITGRYCNVSVCP--VLSCQYHCRSSPSGGVCYCPEG 327
Query: 59 EILS-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I++ +D TC D +EC+ G C+Q+C + G + C C EGYVLE+ + + A
Sbjct: 328 YIVNGSDFRTCVDFDECQIWGICAQVCEDRIGHHQCHCAEGYVLEHQRQCKASTSSGQAS 387
Query: 118 LIISNRHSILVADLEEKG------KDHRA------------------------------- 140
+I SN +L+ D+ + HR
Sbjct: 388 VIFSNGRDLLIGDIHGRSFQILVESQHRGVAVGVDFHYELHRVFWTDITQDKVFSIDINT 447
Query: 141 ---QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
Q+++ +D E LA DWI +Y +++ +NRI+V + +G++R+ L +N+ PRG+
Sbjct: 448 LDIQEVLNVSVDTAENLAVDWINNKLYVVETTVNRIDVVNLDGSDRVTLITENLGHPRGI 507
Query: 198 MLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
LDP+ G +LF++DW EN P +ER MDG+ R++++ +K+ WP G+TLD+ ++RVY
Sbjct: 508 ALDPTIG--YLFFSDW-ENLSGVPAVERAFMDGTARTSLVKSKLGWPAGITLDMVSKRVY 564
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+ D++ D+I+ + Y + RK + GG+ +P G
Sbjct: 565 WVDARFDYIE--------TITYDGLQRKT--VVHGGSLIPQPYGIT-------------- 600
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
L+E LF+TDW ++ + +N+ T + ++Y+ +
Sbjct: 601 LFE-------------------EQLFFTDW------TKMAVMKANKFTETNPQVYYRS-- 633
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDL 431
TL +Y + + + C + G +QV +I +++ ND +G L DL
Sbjct: 634 TLRPYGVTIYHSLRQRKAENPCGNNNGGCEQVCVISHILD--NDGLGYRCKCTLGFDL 689
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 147/320 (45%), Gaps = 63/320 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGA-LCTCPPGEIL 61
C+ VCD DC + DE GC+L E + LC + C G +CTC PG
Sbjct: 3930 HCIPQNYVCDNVDDCGDHFDEM-GCNLGEQRSCAENLCQHNCTQLSEGGFICTCRPGYKA 3988
Query: 62 SN-DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY-------------------VL 101
S + CQD+NECEQ G C+Q C NTKGSY C+C EG+ +L
Sbjct: 3989 STLNRNLCQDINECEQFGTCAQDCHNTKGSYECACVEGFKSMGDPYGKRCAADGNPPLLL 4048
Query: 102 EYDNHTCKAINHSAAFL--IISNRHSILVADLE--------------------------- 132
DN + N S+ + N I D +
Sbjct: 4049 LPDNIRIRKYNLSSEKFSDYLDNEEHIQAIDYDWDPEGIGLSVVYYSVLGEGSNFGSIKC 4108
Query: 133 ------EKGKDHRAQ--DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
E G ++ Q D+ + + +GLA DW+G HIYW D+R RIEV +G R
Sbjct: 4109 AYIPNFESGSNNPVQAVDLNLKYIVQPDGLAVDWVGRHIYWSDARTKRIEVAKLDGRYRK 4168
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L + QP ++++P G L+WTDWG +IE MDG +R ++S + WP GL+
Sbjct: 4169 WLISTELDQPAAIVVNPKLGL--LYWTDWGRESKIECSWMDGQHRQILVSEDLGWPTGLS 4226
Query: 245 LD-IATRRVYFADSKLDFID 263
+D + R+Y++DSK + ++
Sbjct: 4227 IDYLNNDRIYWSDSKENVVE 4246
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 103/459 (22%), Positives = 180/459 (39%), Gaps = 104/459 (22%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G+ L DN TC N +F+++S + HS
Sbjct: 2021 CQQICLPVPGGLFSCACATGFKLNPDNRTCSQYN---SFIVVSMLSVIEGFSLELSDHSQ 2077
Query: 127 LVADLEEKGKDHRAQDI-VVSGL------------------------------------D 149
+ + G++ D+ V SGL +
Sbjct: 2078 AMVPVAGPGRNALHVDVDVFSGLIYWCDFYSSVPSQNAIRRVKPDGSDFTNIVTSGIGQN 2137
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ G++Y+ + + IEV N T R +L K + PR +++DP R+
Sbjct: 2138 GVRGIAVDWVAGNLYFTNGFESETLIEVLRINTTYRRILLKATVDMPRAIVVDPK--NRY 2195
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF------ 261
LFW D+G+ P+IER +D +NR+ ++S I P GL +D +Y+ D LD
Sbjct: 2196 LFWADYGQKPKIERAFLDCTNRTVLVSEGIITPRGLAVDHYNSYIYWVDDSLDMITRTHI 2255
Query: 262 IDCKSLEIKTNVNYSTIF------RKLYWID-----------EGGNGVPLKIGKANMDGS 304
I +S I+ Y T + + W+D E GN P + + N+
Sbjct: 2256 ISGESEVIRVGGRYPTPYGITVFGNSIIWVDRNLKKILQASKEPGNTEPPTVIRDNLSWL 2315
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR-------IERIG---- 353
+ Q+ ++ N + C+ + F + P+ +E G
Sbjct: 2316 RDVAMFDQQVQPRSPAEVNNNPCMENNGGCSHFCFALSGLQTPKCGCAFGTVESDGKSCA 2375
Query: 354 ----------MDGSNRSTIISTKIYWPNGLTLDIATRRVYF-ADSKLDFIDFCNYDGTGR 402
++ S RS + + + P T+++ V DS + I F +G
Sbjct: 2376 LSTENVLIFALENSLRSLQLDPENHSPPFRTINVERTAVALDYDSLNNRIYFTQNSDSGH 2435
Query: 403 QQVILIDLMVEFTNDLMGDN--GVPALALDLENGMLYYS 439
Q+ ++L ++ ++ + +A D N +YYS
Sbjct: 2436 GQISYVNLYSGDSSTVIASDIGSADGIAFDWINNRIYYS 2474
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 116/255 (45%), Gaps = 50/255 (19%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ S + +G+A+DWI IY+ D I +G+NR V+A+ + +PR ++LDP
Sbjct: 2451 VIASDIGSADGIAFDWINNRIYYSDYINQTINSMAVDGSNRTVIAR--VLRPRAIVLDPC 2508
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDW N +IER + G+ R +I+++ + WPNGLTLD +Y+AD+ L
Sbjct: 2509 RG--YMYWTDWSTNAKIERATLGGNFRVSIVNSSLVWPNGLTLDYEEELLYWADASLQ-- 2564
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I ++++ G + ++VS L+
Sbjct: 2565 --------------------------------RIERSSLTGMDREVIVSTTLHPF----- 2587
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
M Y ++++WTDW DGS + +I+ P G+ + + +
Sbjct: 2588 --AMTLYG-----QYIYWTDWYTKSVYRANKYDGSGQIVMITNLPTRPMGIRISGKSEQS 2640
Query: 383 YFADSKLDFIDFCNY 397
++ F C++
Sbjct: 2641 QCSNPCSQFNGGCSH 2655
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 101/229 (44%), Gaps = 42/229 (18%)
Query: 74 CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF---------------- 117
CEQ S + N Y C C G+ L DN C A+ F
Sbjct: 662 CEQVCVISHILDNDGLGYRCKCTLGFDLAEDNRHCVAVKQFLLFSSQVAIRGIPNVFTSQ 721
Query: 118 ----LIISNRHSILVA-DLEEKGK-----------------DHRAQDIVVSG-LDLVEGL 154
+ ++ HS V D + K D ++I+ + ++ VEGL
Sbjct: 722 KDVIVPVTRSHSFFVGVDFWAQEKTIFFSDTARDTICRQNIDGTGREILTANRVENVEGL 781
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
+DWI ++YW ++ I V +R + + N+ PR +++ P G ++FWTDW
Sbjct: 782 TFDWISKNLYWTETSYRSISVMRLADKSRREIVQ-NLNNPRAIVVHPVMG--YIFWTDWF 838
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+I R DGS+ I++T + WPNGL +D + R+Y+AD+ D I+
Sbjct: 839 RPAKIMRAWSDGSHALPIVNTTLGWPNGLAIDWSALRLYWADAFFDKIE 887
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 137/359 (38%), Gaps = 97/359 (27%)
Query: 80 CSQMC---TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
C+ +C + Y C C+ G++L +D+ C + FLI +H I L + K
Sbjct: 1701 CTHLCLLSSQGPNFYSCMCSSGWLLSHDSVNC--LRDEKPFLITVRQHVIFGISLNPEEK 1758
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ A + ++GL + +D + IYW++
Sbjct: 1759 SNDAM-VPITGLQNSYDVDFDDVEQFIYWVEH---------------------------- 1789
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII-STKIYWPNGLTLDIATRRVYFA 255
PG I R+ DG+NR +T + P L LD +R +Y+
Sbjct: 1790 ------PG-------------EIHRVKTDGTNRMVFAPATIVGSPVSLALDWISRNLYYT 1830
Query: 256 DSKLDFIDCKSLE--------------------IKTNVNYSTIFRKLYWIDEG-GNGVPL 294
+ I+ +L +V KLYW D+G GVP
Sbjct: 1831 NPATQSIEVLTLRGDHRYRKTLITNDGTVTGAGFPISVTIDPARGKLYWSDQGTKTGVPA 1890
Query: 295 KIGKANMDGSNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPR--IE 350
KI ANMDG+ + IL +G L E + LDL LY WG IE
Sbjct: 1891 KIASANMDGTFSKILFTGNLDHLEFITLDLREQKLY--------------WGVTSTGVIE 1936
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
R +DG+NR I+ + P G+ + +Y++D + I+ + TG +V+L D
Sbjct: 1937 RGNVDGTNR-MILVYHLSHPWGIV--VYDSFLYYSDEDYEVIERVD-KATGANKVVLRD 1991
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 46/203 (22%)
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST 277
+I + + + ST+I++ I +G+ D R+Y++D
Sbjct: 2437 QISYVNLYSGDSSTVIASDIGSADGIAFDWINNRIYYSD--------------------- 2475
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRW 337
+I++ I +DGSN +++ A+ LD C +
Sbjct: 2476 ------YINQ-------TINSMAVDGSNRTVIARVLRPRAIVLD-----------PCRGY 2511
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
++WTDW N +IER + G+ R +I+++ + WPNGLTLD +Y+AD+ L I+ +
Sbjct: 2512 MYWTDWSTNAKIERATLGGNFRVSIVNSSLVWPNGLTLDYEEELLYWADASLQRIERSSL 2571
Query: 398 DGTGRQQVILIDLMVEFTNDLMG 420
G R +VI+ + F L G
Sbjct: 2572 TGMDR-EVIVSTTLHPFAMTLYG 2593
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%)
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
++FWTDW +I R DGS+ I++T + WPNGL +D + R+Y+AD+ D I+ N
Sbjct: 831 YIFWTDWFRPAKIMRAWSDGSHALPIVNTTLGWPNGLAIDWSALRLYWADAFFDKIENSN 890
Query: 397 YDGTGRQQVILIDLMVE 413
+DG R+ + ++ M
Sbjct: 891 FDGLDRRTLDRVEQMTH 907
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 113/488 (23%), Positives = 176/488 (36%), Gaps = 155/488 (31%)
Query: 5 CVNLTKVCDGKTDCPNGADE-----------GPG---CDLAECKHKFGLCSNT------- 43
C L CDG+ DC +G+DE P CD C ++ LC++
Sbjct: 3845 CTQLIWKCDGEDDCGDGSDEELHLCINVPCDSPSRFRCDNNRCIYRHKLCNHVDDCGDGT 3904
Query: 44 ------CH-PTPLGALCT-----CPPGEILSNDSVTCQDMNEC------------EQ--- 76
C PTP CT C G + + V C ++++C EQ
Sbjct: 3905 DEREEQCRAPTP--RPCTEDEFKCGSGHCIPQNYV-CDNVDDCGDHFDEMGCNLGEQRSC 3961
Query: 77 -PGYCSQMCTN-TKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS------------ 121
C CT ++G +IC+C GY N C+ IN F +
Sbjct: 3962 AENLCQHNCTQLSEGGFICTCRPGYKASTLNRNLCQDINECEQFGTCAQDCHNTKGSYEC 4021
Query: 122 ---------------------NRHSILVADLEEKGKDHRAQDIVVSGLD---LVEGLAYD 157
N +L+ D K + + + LD ++ + YD
Sbjct: 4022 ACVEGFKSMGDPYGKRCAADGNPPLLLLPDNIRIRKYNLSSEKFSDYLDNEEHIQAIDYD 4081
Query: 158 W----IGGHIYWLD-----SRLNRIEVCD----ENGTNRIVLAKD----NITQPRGMMLD 200
W IG + + S I+ E+G+N V A D I QP G+ +D
Sbjct: 4082 WDPEGIGLSVVYYSVLGEGSNFGSIKCAYIPNFESGSNNPVQAVDLNLKYIVQPDGLAVD 4141
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
R ++W+D RIE +DG R +IST++ P + + + KL
Sbjct: 4142 WV--GRHIYWSD-ARTKRIEVAKLDGRYRKWLISTELDQPAAIVV----------NPKLG 4188
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
LYW D G KI + MDG + ILVS L L
Sbjct: 4189 L--------------------LYWTDWGRES---KIECSWMDGQHRQILVSEDLGWPTGL 4225
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
++ Y + + ++W+D EN +E I DG++R I + N +LD+
Sbjct: 4226 SID----YLNNDR----IYWSDSKEN-VVESIKYDGTDRRVISNEA---RNPYSLDVFEG 4273
Query: 381 RVYFADSK 388
++Y+ +
Sbjct: 4274 QIYWTSKE 4281
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 13/121 (10%)
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK-DNITQPRGM 197
A IV + L GLA DW +YW D+ ++IE + +G +R L + + +T P G+
Sbjct: 852 HALPIVNTTLGWPNGLAIDWSALRLYWADAFFDKIENSNFDGLDRRTLDRVEQMTHPFGL 911
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+ + F+TDW N I R+ TI I +I ++Y AD+
Sbjct: 912 TI----SGEYAFFTDWRSN-SIGRVRKTDGGALTIFRQGIS-------NIMNVKMYDADT 959
Query: 258 K 258
+
Sbjct: 960 Q 960
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ + ++ G+ D+ +YW D+ L IE D G +R + + P + +
Sbjct: 3350 IISTKIEWPNGITIDYTNDRLYWADAHLGYIEYSDLEGHHRRTVYDGILPHPFAITIFED 3409
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
++WTDW + DGSN+ +++
Sbjct: 3410 T----IYWTDWNTRSVEKGNKYDGSNKVELMN 3437
>gi|345797263|ref|XP_535946.3| PREDICTED: low-density lipoprotein receptor-related protein 2 [Canis
lupus familiaris]
Length = 4630
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/301 (38%), Positives = 168/301 (55%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCDG +DCPNG DE P C+ C G C++ C P GA C CP G +L+ND
Sbjct: 1307 CVNLSAVCDGISDCPNGTDESPLCNQDSCSDSNGGCTHQCVQGPFGAQCLCPSGYLLAND 1366
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++EC+ PG+CSQ C N +GS+ C C++ Y L+ D TCK + L++++++
Sbjct: 1367 SKTCEDIDECDVPGFCSQHCYNMRGSFRCWCDKEYTLDADRRTCKVTASESLLLLVASQN 1426
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+ ++ + G D R
Sbjct: 1427 QIVADNITSQVHNIYSVVRNGSHIVALDFDSISGRVFWSDGSQGKIWSAFQNGTDRRV-- 1484
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ SG+ + E + DW+G ++YW D L IEV +G++R VL NI+ PRG+ LDP
Sbjct: 1485 ILNSGVTMTESIVVDWVGRNLYWTDYALETIEVSKLDGSHRTVLISKNISNPRGLALDPR 1544
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+FW+DWG +PRIER MDGS R+ I+ KI+WP+G+T+D R +YF DS LD+I
Sbjct: 1545 ISDHLMFWSDWGHHPRIERASMDGSLRTVIVQDKIFWPSGITIDYPNRLLYFLDSYLDYI 1604
Query: 263 D 263
D
Sbjct: 1605 D 1605
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/368 (33%), Positives = 175/368 (47%), Gaps = 69/368 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKF-GLCSNTCHPTPLGALCTCPPGEILSN 63
C+++ KVC+ DC + +DE GC + EC C C T C+C PG L +
Sbjct: 3067 CIDMAKVCNHLDDCSDNSDEK-GCGVNECNDPLLSSCDQNCTDTLTSFYCSCRPGYKLMS 3125
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D +C D++EC E P CSQMC N GSYIC C GY+ E D +C+ ++ +LI SN
Sbjct: 3126 DKRSCDDIDECKETPFVCSQMCENVMGSYICKCAPGYIREPDGKSCRQNSNIEPYLIFSN 3185
Query: 123 R------------HSILVA--------------------DLEEK-------GKDHRAQDI 143
R +S+++ D E K K +R + +
Sbjct: 3186 RYYLRNLTTDGHYYSLILQGLGNAVALDFDRVEKRLYWIDAENKVIERMFLNKTNR-ETV 3244
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPR 195
+ L E LA DW+ +YWLD+ L+ + V D +G R LA+ + PR
Sbjct: 3245 INHKLPAAESLAVDWVARKLYWLDAYLHCLSVSDLDGRYRRKLAEHCVDVNNTFCFDHPR 3304
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G+ L P G +++W DW I RIGMDG+N+S IISTKI WPNG+T+D +Y+A
Sbjct: 3305 GIALHPRYG--YVYWADWAYQAYIGRIGMDGTNKSVIISTKIEWPNGITIDYTNDLLYWA 3362
Query: 256 DSKLDFIDCKSLEIKTNVNYS----------TIFR-KLYWIDEGGNGVPLKIGKAN-MDG 303
D+ L +I+ LE + TIF +YW D V K N DG
Sbjct: 3363 DAHLGYIEYSDLEGRHRHTVYDRTLPHPFAITIFEDTIYWTDWNTRTVE----KGNKYDG 3418
Query: 304 SNASILVS 311
S+ ILV+
Sbjct: 3419 SDRIILVN 3426
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 176/386 (45%), Gaps = 108/386 (27%)
Query: 5 CVNLTKVCDGKT---------------------------------------------DCP 19
C++ VCDG+ DCP
Sbjct: 218 CISQNMVCDGENDCQDNGDENGCESSTHRIHECYPGEWACPESGKCIPIANVCDGTLDCP 277
Query: 20 NGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL-SNDSVTCQDMNE 73
G DE G CD+ C C CH +P G +C CPPG I+ N++ C D N+
Sbjct: 278 EGEDENNSTKGRYCDVNLC--SVLSCEYQCHMSPSGGMCYCPPGFIVDQNNTHNCVDFND 335
Query: 74 CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEE 133
C+ G C QMC + G + C C EGYVLE+ H + A +I SN +L+ D+
Sbjct: 336 CQIWGVCDQMCEDRIGHHQCRCAEGYVLEHQRHCKANTSSEQASVIFSNGRDLLIGDIHG 395
Query: 134 K-------GKDH-------------------RAQDIVVS------------GLDLVEGLA 155
+ ++H QD V S LD E LA
Sbjct: 396 RTFSILVESQNHGVAVGVDFHYHLQRVFWTDTVQDKVFSVDISGFNIQEVISLDDPENLA 455
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW-- 213
DWI +Y +++++NRI++ + +G++RI+L N+ PRG+ +DP+ G +LF++DW
Sbjct: 456 VDWINNKLYLVETKVNRIDMVNLDGSHRIILITGNLGHPRGIAVDPTVG--YLFFSDWES 513
Query: 214 --GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
GE P++ER MDG+NR ++ TK+ WP G+TLDI ++RVY+ D + D+I+
Sbjct: 514 LSGE-PKLERAFMDGTNRKDLVKTKLGWPAGITLDIVSKRVYWVDCRFDYIE-------- 564
Query: 272 NVNYSTIFRKLYWIDEGGNGVPLKIG 297
V Y I RK + GG+ +P G
Sbjct: 565 TVTYDGIQRKT--VIHGGSLIPHPFG 588
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 181/413 (43%), Gaps = 107/413 (25%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+C+ + VCDG DCP G DE G CD+ C C CH +P G +C CPPG
Sbjct: 262 KCIPIANVCDGTLDCPEGEDENNSTKGRYCDVNLCS--VLSCEYQCHMSPSGGMCYCPPG 319
Query: 59 EIL-SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I+ N++ C D N+C+ G C QMC + G + C C EGYVLE+ H CKA S
Sbjct: 320 FIVDQNNTHNCVDFNDCQIWGVCDQMCEDRIGHHQCRCAEGYVLEHQRH-CKANTSS--- 375
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
+A I +G DL+ G D
Sbjct: 376 --------------------EQASVIFSNGRDLLIG-----------------------D 392
Query: 178 ENGTNRIVLAKDNITQPRGMML--DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST 235
+G +L + +Q G+ + D + +FWTD ++ ++ + + G N +IS
Sbjct: 393 IHGRTFSILVE---SQNHGVAVGVDFHYHLQRVFWTDTVQD-KVFSVDISGFNIQEVISL 448
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
P L +D ++Y ++K++ ID
Sbjct: 449 DD--PENLAVDWINNKLYLVETKVNRID-------------------------------- 474
Query: 296 IGKANMDGSNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
N+DGS+ IL++G L +A+D G L++S W P++ER
Sbjct: 475 --MVNLDGSHRIILITGNLGHPRGIAVDPTVGYLFFSD--------WESLSGEPKLERAF 524
Query: 354 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
MDG+NR ++ TK+ WP G+TLDI ++RVY+ D + D+I+ YDG R+ VI
Sbjct: 525 MDGTNRKDLVKTKLGWPAGITLDIVSKRVYWVDCRFDYIETVTYDGIQRKTVI 577
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 127/260 (48%), Gaps = 52/260 (20%)
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
R+ V+SG ++G+A+DWI IY+ D I E+G+ R V+A ++++PR ++
Sbjct: 2436 RSPTAVISGKGNLDGIAFDWINRRIYYSDYTNQTINSMAEDGSQRTVIA--HVSKPRAIV 2493
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
LDP G +++WTDWG N +IER + G+ R I+++ + WPNGLTLD +Y+AD+
Sbjct: 2494 LDPCRG--YMYWTDWGTNAKIERATLGGNFRVPIVNSSLVWPNGLTLDYENDLLYWADAS 2551
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
L KI ++ + G+ ++V+ +
Sbjct: 2552 LQ----------------------------------KIERSTLTGTQREVIVN-TAFHPF 2576
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG-MDGSNRSTIISTKIYWPNGLTLDI 377
+L L ++++WTDW RI R DGS ++ + ++ + PNG+ + +
Sbjct: 2577 SLTLYG-----------QYIYWTDWNTK-RIYRANKYDGSGQTAMTTSFPFRPNGIRVVV 2624
Query: 378 ATRRVYFADSKLDFIDFCNY 397
++ ++ +F C++
Sbjct: 2625 KNQQQQCSNPCSEFNGGCSH 2644
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 59/267 (22%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G L DN TC ++FL++S + HS
Sbjct: 2009 CQQLCLPIPGGLFSCACASGMKLNPDNRTCSPY---SSFLVVSMLSIIRGFSLEFSDHSE 2065
Query: 127 LVADLEEKGKDHRAQDIVVS-------------------------------------GLD 149
+ + +G++ D+ VS G +
Sbjct: 2066 AMVPVAGQGRNALHVDVDVSSGFIYWCDFSSSMTSRNAIRRIKPNGSGFTNIVTHGIGEN 2125
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ G++Y+ ++ ++ IEV N T R +L K +PR +++DP R+
Sbjct: 2126 GVRGIAVDWVAGNLYFTNAFVSETLIEVLRINTTYRRILLKATADRPRDIVVDPK--NRY 2183
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
LFW D+G++P+IER +D +NR+ ++S I P GL +D + +Y+ D LD I +
Sbjct: 2184 LFWADYGQSPKIERSFLDCTNRTVLVSEGIVTPRGLAVDHSNGYIYWVDDSLDIIARIGI 2243
Query: 268 EIKTN--VNYSTIFRKLYWIDEGGNGV 292
E + + Y + + Y I GN +
Sbjct: 2244 EAEETEVIRYGSRYPTPYAITVFGNSI 2270
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 117/276 (42%), Gaps = 68/276 (24%)
Query: 50 GALCTCPPGEILSN-DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH-- 106
G +C+C PG S D +C D+NECEQ G C Q C NTKGSY CSC EG+ D +
Sbjct: 3964 GFICSCRPGFKASILDRNSCDDINECEQFGVCPQNCQNTKGSYECSCAEGFRSVSDQYGK 4023
Query: 107 TCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDW----IGGH 162
C A + L+ N EK D+ + G + ++ + YDW IG
Sbjct: 4024 RCAADGNPPLLLLPENVRIRKYNLSSEKFSDY------LEGEERIQAIDYDWDPEDIGLS 4077
Query: 163 IYWLD--------SRLNRIEVCD-ENGTNRIV----LAKDNITQPRGMMLD--------- 200
+ + + R + + E+GTN +V L I QP G+ +D
Sbjct: 4078 VVYYTVLGHGSDFGAIKRAYIPNFESGTNNLVSKVNLNLKYIMQPDGLAVDWVGRHIYWS 4137
Query: 201 --------------------------------PSPGTRWLFWTDWGENPRIERIGMDGSN 228
+P ++WTDWG P+IE MDG +
Sbjct: 4138 DAKSKRIQVAKLDGRYRKWLISTGLDQPAAVVVNPKLGLMYWTDWGREPKIESAWMDGQH 4197
Query: 229 RSTIISTKIYWPNGLTLD-IATRRVYFADSKLDFID 263
R T++ + WP GL +D + R+Y++D K + I+
Sbjct: 4198 RKTLVQENLGWPTGLAIDYLNNDRIYWSDFKENNIE 4233
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 103/239 (43%), Gaps = 43/239 (17%)
Query: 65 SVTCQDMNE-CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF------ 117
S C+D N CE S N Y C C G+ L+ DN C A+ F
Sbjct: 642 SNPCRDNNGGCEHVCVLSHRTDNDGLGYRCRCTLGFSLDVDNRHCVAVKQFLIFSSEVAV 701
Query: 118 ----LIISNRHSILVA-----------DLEEK---------GKDH-RAQDIVVSGLDL-- 150
+S + ++V D + K KD Q+I +G ++
Sbjct: 702 RGIPFNLSTQEDVIVPVTGNPSFFVGIDFDAKENTIFFSDTSKDMIFKQNINGTGREILT 761
Query: 151 ------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
VE L +DWI ++YW D+ I V +R + + N+ PR +++ P G
Sbjct: 762 ANRVESVESLTFDWISKNLYWTDASYRSISVMRLADKSRRAIIQ-NLNNPRSIVVHPIAG 820
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
++F+TDW +I R DGSN I++T + WPNGL +D R+Y+ D+ D I+
Sbjct: 821 --YIFFTDWFRPAKIMRAWSDGSNLLPIVNTTLGWPNGLAIDWGALRLYWIDAFFDKIE 877
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 178/475 (37%), Gaps = 94/475 (19%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSNTCHPTPLGALCTCPPG 58
+RC+ ++C+ DC +G+DE LA C CSN H +C
Sbjct: 3872 NRCIYKHELCNHVDDCGDGSDEKEEQCLASTSRPCTENEFKCSNG-HCISQNLVCDDVDD 3930
Query: 59 EILSNDSVTCQDMNE--CEQPGYCSQMCTN-TKGSYICSCNEGYVLE-YDNHTCKAINHS 114
D C E C + C Q CT +G +ICSC G+ D ++C IN
Sbjct: 3931 CGDHFDETGCNTGKERSCAE-NLCEQNCTQLNEGGFICSCRPGFKASILDRNSCDDINEC 3989
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGL--AYDWIGGHIYWLDSRLNR 172
F + E EG D G
Sbjct: 3990 EQFGVCPQNCQNTKGSYE---------------CSCAEGFRSVSDQYG------------ 4022
Query: 173 IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI 232
+ C +G ++L +N+ + R L + +L GE RI+ I D
Sbjct: 4023 -KRCAADGNPPLLLLPENV-RIRKYNLSSEKFSDYL----EGEE-RIQAIDYDWDPEDIG 4075
Query: 233 ISTKIYWPNGLTLDI-ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIF-----------R 280
+S Y G D A +R Y + + +L K N+N I R
Sbjct: 4076 LSVVYYTVLGHGSDFGAIKRAYIPNFESGT---NNLVSKVNLNLKYIMQPDGLAVDWVGR 4132
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
+YW D +I A +DG L+S L + A+ ++ + G++Y
Sbjct: 4133 HIYWSDAKSK----RIQVAKLDGRYRKWLISTGLDQPAAVVVNPKLGLMY---------- 4178
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDFCNY 397
WTDWG P+IE MDG +R T++ + WP GL +D + R+Y++D K + I+ +
Sbjct: 4179 -WTDWGREPKIESAWMDGQHRKTLVQENLGWPTGLAIDYLNNDRIYWSDFKENNIETIKH 4237
Query: 398 DGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYY-STEGAEFLKTPLF 451
DGT R+ ++ + + +LD+ G Y+ S + E K F
Sbjct: 4238 DGTDRR--------------IVANAAMNPYSLDIFEGQFYWISKDKGEVWKQDKF 4278
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 32/181 (17%)
Query: 243 LTLDIATRRVYF------ADSKLDFIDCKS--------LEIKTNVN---YSTIFRKLYWI 285
L D + R+YF +S++ ++ S + K N++ + I R++Y+
Sbjct: 2404 LAYDGLSNRIYFTQSLESGNSRISYVSLNSGTRSPTAVISGKGNLDGIAFDWINRRIYYS 2463
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
D I DGS +++ A+ LD C +++WTDWG
Sbjct: 2464 DYTNQ----TINSMAEDGSQRTVIAHVSKPRAIVLD-----------PCRGYMYWTDWGT 2508
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
N +IER + G+ R I+++ + WPNGLTLD +Y+AD+ L I+ GT R+ +
Sbjct: 2509 NAKIERATLGGNFRVPIVNSSLVWPNGLTLDYENDLLYWADASLQKIERSTLTGTQREVI 2568
Query: 406 I 406
+
Sbjct: 2569 V 2569
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 77/185 (41%), Gaps = 27/185 (14%)
Query: 242 GLTLDIATRRVYFADSKLDFI-------------DCKSLEIKTNVNYSTIFRKLYWIDEG 288
G+ D ++F+D+ D I +E ++ + I + LYW D
Sbjct: 727 GIDFDAKENTIFFSDTSKDMIFKQNINGTGREILTANRVESVESLTFDWISKNLYWTDAS 786
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ + D S +I+ + ++ + G ++F+TDW +
Sbjct: 787 YRSISVM---RLADKSRRAIIQNLNNPRSIVVHPIAG-----------YIFFTDWFRPAK 832
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I R DGSN I++T + WPNGL +D R+Y+ D+ D I+ +DG R+ + I
Sbjct: 833 IMRAWSDGSNLLPIVNTTLGWPNGLAIDWGALRLYWIDAFFDKIEHSTFDGLDRRNLGHI 892
Query: 409 DLMVE 413
M
Sbjct: 893 QQMTH 897
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 102/240 (42%), Gaps = 54/240 (22%)
Query: 213 WGENP-RIERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DG+NR+ ++S +++ L LD +R Y+ + I+ L+++
Sbjct: 1776 WVENPGEIHRVKTDGTNRTVLVSLSRLGSSMSLALDWISRNFYYTNPGTPSIE--VLKLQ 1833
Query: 271 TNVNYSTIFRKLYWIDEG---GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGML 327
+V Y RK ++G G G P+ I +D NG L
Sbjct: 1834 GDVRY----RKTLITNDGTALGVGSPVGI----------------------TVDPVNGKL 1867
Query: 328 YYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 387
Y+S TD G +I MDG+ + + + +TLDI +++Y+A +
Sbjct: 1868 YWSDQG-------TDSGVPAKIASANMDGTFPKVLFTGNLEHLEFITLDIKEQKLYWAVT 1920
Query: 388 KLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I+ N DGT R +IL++ + + + + LYY+ E E ++
Sbjct: 1921 STGVIERGNVDGTNR--MILVNHLSH------------PWGIAVYDSFLYYTDEHYEVIE 1966
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 134/317 (42%), Gaps = 56/317 (17%)
Query: 46 PTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMC---TNTKGSYICSCNEGYVLE 102
P PLG + P + +S CS +C + Y C+C G+ L
Sbjct: 1666 PQPLGVVAVHPVKQPDGENSCA---------SSSCSHLCLLSSQRPHLYSCACPSGWSLS 1716
Query: 103 YDNHTCKAINHSAAFLIISNRHSILVA-DLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGG 161
+D+ TC + FLI RHSI+ L + K + A + ++G+ + +D
Sbjct: 1717 HDSVTC--LKDDQPFLITV-RHSIIFGISLNPEVKSNDAM-VPIAGVMNGYDVEFDDSEQ 1772
Query: 162 HIYWLDS--RLNRIEVCDENGTNRIVLAK-DNITQPRGMMLDPSPGTRWLFWTDWGENPR 218
IYW+++ ++R++ +GTNR VL + + LD +R ++T+ G P
Sbjct: 1773 FIYWVENPGEIHRVKT---DGTNRTVLVSLSRLGSSMSLALDWI--SRNFYYTNPG-TPS 1826
Query: 219 IERIGMDGS--NRSTIISTK-----IYWPNGLTLDIATRRVYFADSKLDF-IDCKSLEIK 270
IE + + G R T+I+ + P G+T+D ++Y++D D + K
Sbjct: 1827 IEVLKLQGDVRYRKTLITNDGTALGVGSPVGITVDPVNGKLYWSDQGTDSGVPAKIASAN 1886
Query: 271 TNVNYSTIF-----------------RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+ + + +KLYW GV I + N+DG+N ILV+
Sbjct: 1887 MDGTFPKVLFTGNLEHLEFITLDIKEQKLYWA-VTSTGV---IERGNVDGTNRMILVN-H 1941
Query: 314 LYEALALDLENGMLYYS 330
L + + + LYY+
Sbjct: 1942 LSHPWGIAVYDSFLYYT 1958
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ + ++ G+ D+ +YW D+ L IE D G +R + + P + +
Sbjct: 3339 IISTKIEWPNGITIDYTNDLLYWADAHLGYIEYSDLEGRHRHTVYDRTLPHPFAITIFED 3398
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIIST 235
++WTDW + DGS+R +++T
Sbjct: 3399 T----IYWTDWNTRTVEKGNKYDGSDRIILVNT 3427
>gi|444721558|gb|ELW62289.1| Low-density lipoprotein receptor-related protein 2 [Tupaia chinensis]
Length = 4056
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 136/372 (36%), Positives = 187/372 (50%), Gaps = 63/372 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCDG +DCPNG DE P C+ C G C++ C P GA C CP G L+ND
Sbjct: 1299 CVNLSSVCDGVSDCPNGTDESPLCNQDSCSDANGGCTHECIQGPFGAQCLCPEGYRLAND 1358
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++EC +CSQ C NT+GS+ C C++ Y LE D TCK + L+++NR+
Sbjct: 1359 SKTCEDIDECAVLSFCSQHCYNTRGSFRCWCDKDYRLEGDGRTCKVTASESLLLLVANRN 1418
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+ ++ + G D R
Sbjct: 1419 QIVADNITAQVHNIYPLVQNGSHIVAVDFDSISGRIFWSDSGQGKTWSAFQNGTDRRL-- 1476
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ S + + E +A DWIG ++YW D IEV +G++R VL N+T PRG+ LDP
Sbjct: 1477 VFDSSITMTETIAIDWIGRNLYWTDYATETIEVSTIDGSHRTVLISKNLTNPRGLALDPR 1536
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
LFWTDWG +PRIER MDGS R+ I+ KIYWP GLT+D R +YF DS LDFI
Sbjct: 1537 MNEHVLFWTDWGRHPRIERASMDGSLRTVIVQEKIYWPTGLTIDYPNRLIYFMDSYLDFI 1596
Query: 263 D-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM-DGSNASI 308
D L I+ + +YW D + ++ +AN G N S+
Sbjct: 1597 DFCDYDGQHRRQVIASDLVIRHPYTLTLFEDSVYWTDRATH----RVMQANKWHGGNRSV 1652
Query: 309 LVSGQLYEALAL 320
++ ++ AL L
Sbjct: 1653 VMY-NIHWALGL 1663
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 185/410 (45%), Gaps = 96/410 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + KVC+ DC + +DE GC + EC+ C + C TP C+C PG L
Sbjct: 3084 HCIEMVKVCNHLDDCSDNSDE-KGCGINECQDPSISGCDHNCTDTPTSFYCSCLPGYKLM 3142
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P CSQ C N GSYIC C GY+ E D TC+ ++ +LI S
Sbjct: 3143 SDKRTCVDIDECKETPFVCSQKCENVVGSYICKCAAGYIREPDGKTCRQNSNIEPYLIFS 3202
Query: 122 NRH--------------------SILVADLEEKGK-----------------DHRAQDIV 144
NR+ +++ D + K + ++I+
Sbjct: 3203 NRYYLRNLTVDGQFYSLILQGLGNVVSLDFDRVEKRLYWIDIQRHVIERMFLNKTNREII 3262
Query: 145 VSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPR 195
++ L EGLA DW+ +YW+D LN + V + +G R LA+ + PR
Sbjct: 3263 INHRLPAAEGLAVDWVARKLYWVDINLNSMFVSNLDGGYRRTLAQHCVDANNTFCFDNPR 3322
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G+ L P G +++WTDWG I R+GMDG+N+S IIS+K+ WPNG+T+D +Y+A
Sbjct: 3323 GIALHPQYG--YVYWTDWGHRAYIARVGMDGTNKSVIISSKLEWPNGITIDYTNDLLYWA 3380
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ L +I+ LE G + + G L
Sbjct: 3381 DAHLGYIEYSDLE----------------------------------GRHRHTVYDGTLS 3406
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ + +Y WTDW + DGS+R+T+++T
Sbjct: 3407 HPFAMTIFEDSVY-----------WTDWNTRTVEKGNKYDGSDRTTLVNT 3445
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 173/340 (50%), Gaps = 65/340 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+C+ ++KVCDG DCP+G DE G C L C C CH TP G C CPPG
Sbjct: 252 QCILISKVCDGILDCPDGDDENSTTAGKYCGLTMCSALN--CEYECHKTPGGGACVCPPG 309
Query: 59 EILS-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA-A 116
I++ NDS TC ++C+ G C Q C N + C C EGY+LE+ H CKA S
Sbjct: 310 YIINKNDSRTCVAFDDCQIWGICDQKCENRGDHHQCLCEEGYILEHGRH-CKANESSGKP 368
Query: 117 FLIISNRHSILVADLEEKG----------------------------------------K 136
++ SN +L+ D+ +
Sbjct: 369 SILFSNGWDLLIGDIHGRNFQFLAESQNRGVVVGIDFHYQLRKVFWTDTVQNKVFSVDVN 428
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ + Q+I +D E LA DW+ +Y ++++++RI++ + +G+ + L +++ PRG
Sbjct: 429 NLKIQEIFNISVDAPENLAVDWVSNKLYLVETKVSRIDMANLDGSYPVTLITEDLGHPRG 488
Query: 197 MMLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
+ LDP+ G +LF++DW P++ER MDGSNR ++ TK+ WP+G+TLD+A++RVY
Sbjct: 489 IALDPTVG--YLFFSDWASLSGEPKVERAFMDGSNRKVLVKTKLGWPSGITLDLASKRVY 546
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
+ D + D+I+ V Y I RK + GG+ +P
Sbjct: 547 WLDCRFDYIE--------TVTYDGIERKT--VVSGGSLIP 576
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 114/239 (47%), Gaps = 50/239 (20%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++VS + +G+A+DWI IY+ D I E+G+ R V+A+ +++PR ++LDP
Sbjct: 2434 VIVSDIGTADGIAFDWINRRIYYSDYNNQTINSMAEDGSMRTVIAR--VSKPRAIVLDPC 2491
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+WTDWG N +IER + G+ R I+++ + WP+GL LD +Y+AD+ L
Sbjct: 2492 RG--FLYWTDWGTNAKIERATLGGNFRMPIVNSSLVWPSGLVLDHEDDLLYWADASLQ-- 2547
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
KI ++++ G+N I+VS ++ L L
Sbjct: 2548 --------------------------------KIERSSLTGTNREIIVSA-VFHIFGLTL 2574
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 381
+ ++++WTD+ DGS + + ++ P G++ + ++
Sbjct: 2575 YD-----------QYIYWTDFYTKKVYRANKYDGSGQIAMTTSMPVQPKGISTVVKNQQ 2622
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 172/443 (38%), Gaps = 93/443 (20%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G+ L DN TC + +F+++S + HS
Sbjct: 2003 CEQICLPVPGGLFSCACATGFKLNPDNRTCSSYK---SFIVVSMMSVVRGYSLEMSDHSE 2059
Query: 127 LVADLEEKGKDHRAQDIVVS-------------------------------------GLD 149
+ + +G++ D+ V+ G++
Sbjct: 2060 AMVPVAGQGRNALHVDVDVASGFIYWCDFSSSVASRNAIRRIKPDGSSFTNIITYGIGVN 2119
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ G++Y+ ++ + IEV N T R VL K + PR +++DP R+
Sbjct: 2120 GVRGIAVDWLAGNLYFTNAFASETLIEVLRINTTYRRVLLKATVDMPRHIVVDPR--NRY 2177
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
LFW D+G+ P+IER +D +NR+ ++S I P GL +D + +Y+ D LD I
Sbjct: 2178 LFWADYGQKPKIERSFLDCTNRTVLVSEGIVTPRGLAVDHSNDYIYWVDDSLDIIARIRF 2237
Query: 268 E------IKTNVNYSTIF------RKLYWID-----------EGGNGVPLKIGKANMDGS 304
+ I+ Y T + + W+D E GN P + + N++
Sbjct: 2238 DGEGSQVIRYGSRYPTPYGITVFGNSIIWVDRNLKKIFKASKEPGNTEPPTVVRDNLNWL 2297
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR--IERIGMDGSNRSTI 362
+ Q+ ++ N + C+ F P+ ++ +S
Sbjct: 2298 RDVTIFDEQVQPRSPTEVNNNPCLENNGGCSHLCFALPELHTPKCGCAYGTLESDGKSCA 2357
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
IST+ + L + + + D L F Q + + + D + +
Sbjct: 2358 ISTENFLIFALDNSLRSLHLDPTDHSLPF-----------QAITVERTAIAVVYDNINNR 2406
Query: 423 GVPALALDLENGMLYYSTEGAEF 445
LD E+G + Y + +E
Sbjct: 2407 IYFTQNLDSEHGQISYVSLNSEI 2429
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 112/485 (23%), Positives = 186/485 (38%), Gaps = 91/485 (18%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKF----GLC---------------- 40
A RC+ L+ VCDG DC + DE C C +++F GLC
Sbjct: 2960 ARRCIPLSWVCDGDADCSDAYDEHQNCTRRSCAENEFTCANGLCILNSFRCDWRNDCGDF 3019
Query: 41 ---SNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGS---YIC 93
N +PT TC G + N++ C N+C + S +C + + +
Sbjct: 3020 SDERNCSYPTCHEHQFTCQNGRCI-NEAYVCDGQNDCGDDSDELSHLCHTPEATCPPHQF 3078
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEE---KGKDHRAQDIVVSGLDL 150
C+ G+ +E K NH S+ + + ++ G DH D S
Sbjct: 3079 KCDNGHCIE----MVKVCNHLDDCSDNSDEKGCGINECQDPSISGCDHNCTDTPTS---- 3130
Query: 151 VEGLAYDWIGGHIYWLDSRLN-RIEVCDEN------------GTNRIVLAKDNITQPRGM 197
+ G+ D R I+ C E G+ A I +P G
Sbjct: 3131 ---FYCSCLPGYKLMSDKRTCVDIDECKETPFVCSQKCENVVGSYICKCAAGYIREPDGK 3187
Query: 198 MLDPSPGTR-WLFWTDWGENPRIERIGMDGSNRSTIIS--------------TKIYWPNG 242
+ +L +++ + + +DG S I+ ++YW
Sbjct: 3188 TCRQNSNIEPYLIFSN---RYYLRNLTVDGQFYSLILQGLGNVVSLDFDRVEKRLYW--- 3241
Query: 243 LTLDI---ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKA 299
+DI R++ + + I L + + RKLYW+D N + + +
Sbjct: 3242 --IDIQRHVIERMFLNKTNREIIINHRLPAAEGLAVDWVARKLYWVDINLNSMFV----S 3295
Query: 300 NMDGSNASILVSG--QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGS 357
N+DG L D G+ + +++WTDWG I R+GMDG+
Sbjct: 3296 NLDGGYRRTLAQHCVDANNTFCFDNPRGIALHPQYG---YVYWTDWGHRAYIARVGMDGT 3352
Query: 358 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
N+S IIS+K+ WPNG+T+D +Y+AD+ L +I++ + +G R V L F
Sbjct: 3353 NKSVIISSKLEWPNGITIDYTNDLLYWADAHLGYIEYSDLEGRHRHTVYDGTLSHPFAMT 3412
Query: 418 LMGDN 422
+ D+
Sbjct: 3413 IFEDS 3417
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 122/297 (41%), Gaps = 58/297 (19%)
Query: 68 CQDMNE-CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF--------- 117
C D N CEQ S N Y C C G+ L+ D C A+ F
Sbjct: 637 CADNNGGCEQICVLSHRTDNGGLGYRCKCTFGFNLDTDERHCVAVEKFLLFSSQLAVRGI 696
Query: 118 -LIISNRHSILVADLEE----KGKDHRAQD-------------------------IVVSG 147
S + ++V G D AQ+ + +
Sbjct: 697 PFTFSTQEDVMVPVTGHLSFFVGIDFDAQENTIFFSDTSKDMIYKQKINGTGREILTANR 756
Query: 148 LDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTR 206
++ VE L +DWI ++YW D I V + + R +L +N+ PR +++ P G
Sbjct: 757 VENVESLTFDWISKNLYWTDPTHKSISVMRLADKSRRAIL--NNLNSPRAIVVHPIAG-- 812
Query: 207 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SK 258
++F+TDW +I R DGS+ I++T + WPNGL +D + R+Y+ D S
Sbjct: 813 YIFFTDWFRPAKIMRAWSDGSHLLPIVNTTLGWPNGLAIDWSALRLYWVDAFFNKIEHST 872
Query: 259 LDFIDCKSLEIKTNVNYS---TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
D +D + L+ + + T+F + + + G +++ K DG + +++ G
Sbjct: 873 FDGVDRRKLDHIQQMTHPFGLTVFGEHVYFTDWRLGAIVQVRK--RDGGDMTVIRRG 927
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 148/341 (43%), Gaps = 61/341 (17%)
Query: 80 CSQMCT-NTKGS--YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
CS +C +++G Y C+C+ G+ L D+ C + FLI RH++ L+ + K
Sbjct: 1683 CSHLCLLSSQGPKFYSCACSSGWSLSDDSVNC--VRDEQPFLITVRRHTVYGISLDPEVK 1740
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS--RLNRIEVCDENGTNRIVLAKDNIT-Q 193
A + ++G+ +D IYW+++ ++R++ +GTNR VLA ++
Sbjct: 1741 SSDAM-VPITGIQNGFDADFDDSEQFIYWVENAGEIHRVKT---DGTNRTVLAPLSLLGS 1796
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
G+ LD W+ + NP G+ +++ + G TL
Sbjct: 1797 SMGLALD------WISRNLYTTNP--------GTQSIKVLTLRGDIRYGKTLITNDGTPL 1842
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG-GNGVPLKIGKANMDGSNASILVSG 312
A S + + + KLYW D+G +GVP KI ANMDG++ IL +G
Sbjct: 1843 GAGSPI------------GIAVDPVRGKLYWSDQGTQSGVPAKIASANMDGTDLKILFTG 1890
Query: 313 QL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPR--IERIGMDGSNRSTIISTKIY 368
E + LD++ LY W R IER +DG+ R I+ +
Sbjct: 1891 NFEHLEFITLDIKEQKLY--------------WAVTSRGVIERGNVDGTER-MILVHHLS 1935
Query: 369 WPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
P G+ + +Y+ D + + I+ + TG +V+L D
Sbjct: 1936 HPWGIA--VHDSFLYYCDEQYEVIERVD-KATGANKVVLRD 1973
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 15/134 (11%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+ + I R++Y+ D I DGS +++ A+ LD
Sbjct: 2445 IAFDWINRRIYYSDYNNQ----TINSMAEDGSMRTVIARVSKPRAIVLD----------- 2489
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
C +L+WTDWG N +IER + G+ R I+++ + WP+GL LD +Y+AD+ L I
Sbjct: 2490 PCRGFLYWTDWGTNAKIERATLGGNFRMPIVNSSLVWPSGLVLDHEDDLLYWADASLQKI 2549
Query: 393 DFCNYDGTGRQQVI 406
+ + GT R+ ++
Sbjct: 2550 ERSSLTGTNREIIV 2563
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 27/185 (14%)
Query: 242 GLTLDIATRRVYFADSKLDFI-------------DCKSLEIKTNVNYSTIFRKLYWIDEG 288
G+ D ++F+D+ D I +E ++ + I + LYW D
Sbjct: 719 GIDFDAQENTIFFSDTSKDMIYKQKINGTGREILTANRVENVESLTFDWISKNLYWTDPT 778
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ + D S +IL + A+ + G ++F+TDW +
Sbjct: 779 HKSISVM---RLADKSRRAILNNLNSPRAIVVHPIAG-----------YIFFTDWFRPAK 824
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I R DGS+ I++T + WPNGL +D + R+Y+ D+ + I+ +DG R+++ I
Sbjct: 825 IMRAWSDGSHLLPIVNTTLGWPNGLAIDWSALRLYWVDAFFNKIEHSTFDGVDRRKLDHI 884
Query: 409 DLMVE 413
M
Sbjct: 885 QQMTH 889
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Query: 50 GALCTCPPG---EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH 106
G +C+C G IL +S C D+NECEQ G C Q C NTKGSY CSC +G+ D++
Sbjct: 3984 GFICSCRSGFKAGILDRNS--CYDINECEQFGVCPQKCHNTKGSYECSCADGFKSMSDHY 4041
>gi|395844992|ref|XP_003795229.1| PREDICTED: low-density lipoprotein receptor-related protein 2
[Otolemur garnettii]
Length = 4603
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 131/362 (36%), Positives = 188/362 (51%), Gaps = 62/362 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV L VCD DCP+G DE P C+ C G C++ C GA C CPPG +L+ND
Sbjct: 1320 CVKLESVCDNVFDCPSGTDESPLCNEDLCSRFNGGCTHRCIQDSFGARCLCPPGYLLAND 1379
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D+NEC+ PG+CSQ C N +GS+ CSC+ Y+LE D TCK + L++++++
Sbjct: 1380 SKTCEDINECDIPGFCSQHCYNMRGSFRCSCDNEYMLEGDGKTCKVTGSESLLLLVASQN 1439
Query: 125 SILVADLEEK------------------------------------------GKDHRAQD 142
I+ ++ + G D R
Sbjct: 1440 RIIADNVTSQVHSVYPLIQDGSHIIAVDFDSVTGRIFWSDAIQRKTWSAFPNGTDRRV-- 1497
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ S + L E LA DW+G ++YW D L IEV +G++R VL N+T PRG+ LDP
Sbjct: 1498 VFDSNVVLTETLAVDWVGRNLYWTDYALETIEVAKIDGSHRTVLISKNVTNPRGLALDPR 1557
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
LFW+DWG++PRIER MDG++R+ II KI+WP+GLT+D R +YF D+ LD+I
Sbjct: 1558 MNEHVLFWSDWGQHPRIERASMDGTSRTVIIQNKIHWPSGLTIDYPNRLLYFMDAYLDYI 1617
Query: 263 D-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM-DGSNASI 308
D L ++ + + +YW NGV ++ +AN G N S+
Sbjct: 1618 DYCDYNGHHRKQVIASDLILQRSYALTLFEDFVYW----SNGVTQRVMQANKWHGGNQSV 1673
Query: 309 LV 310
L+
Sbjct: 1674 LM 1675
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/313 (35%), Positives = 156/313 (49%), Gaps = 51/313 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGL-CSNTCHPTPLGALCTCPPGEILS 62
CV + K+C+ DC + +DE GC + EC C + C T + C+C PG L
Sbjct: 3036 HCVEMEKLCNHYDDCSDNSDEK-GCGINECSDPSSSGCDHNCTDTIVSFFCSCLPGYKLM 3094
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E+P CSQ C N GSYIC C+ GY+ E D +C+ + +LI S
Sbjct: 3095 SDKRTCVDIDECKERPFVCSQRCENEIGSYICKCDPGYIREPDGRSCRQTSSIEPYLIFS 3154
Query: 122 NRH------------SILVADL-------------------EEKGKDHRA-------QDI 143
NR+ S+++ L EEKG R + I
Sbjct: 3155 NRYYLRNLTVDGSFYSLILQGLGNAVALDFDRVEERLYWIDEEKGVIERMFLNKTDRETI 3214
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT--------QPR 195
+ L +GLA DW+ +YWLDS L + V D NG LA+ + PR
Sbjct: 3215 ISYKLQNPQGLAVDWVSRKLYWLDSSLKGLFVSDLNGDRHRKLAQHCVDLNNTFCFDYPR 3274
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G++L P G +++WTDW I R+GMDG+N+S IISTKI PNG+T+D +Y+
Sbjct: 3275 GIVLHPKYG--YVYWTDWTHRAYIGRVGMDGTNKSVIISTKIMRPNGITIDYTNDLLYWT 3332
Query: 256 DSKLDFIDCKSLE 268
DS L +I+ LE
Sbjct: 3333 DSHLGYIEYSDLE 3345
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 180/414 (43%), Gaps = 108/414 (26%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-----CDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+C+ + KVCDG +DCP G DE CD + C C + CH TP G C CPPG
Sbjct: 273 QCIPIDKVCDGFSDCPGGKDENSTTTESFCDTSICSALN--CEHQCHKTPRGGACFCPPG 330
Query: 59 EILSN-DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA-A 116
++++ D TC + ++C+ G C Q C N G C C EGY+LE + CKA + S
Sbjct: 331 FVINHMDMRTCDEFDDCQIWGICDQKCENRHGHIRCFCEEGYILE-NEQNCKANDSSGQP 389
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
+I SN +L+ D V G ++
Sbjct: 390 SIIFSNGQDLLIGD--------------------VHGTSF-------------------- 409
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRW--LFWTDWGENPRIERIGMDGSNRSTIIS 234
++ + PRGM + R +FWTD+ N ++ + ++G N +++
Sbjct: 410 -----------RNLVESPRGMAVGVDFHYRLGKVFWTDYVRN-KVYSVNINGLNIQEVLN 457
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
+ P L +D ++Y +++++ ID
Sbjct: 458 VSVDSPENLAVDWVNNKLYVVETRINRID------------------------------- 486
Query: 295 KIGKANMDGSNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
AN+DGS L++ L +ALD G L++S W P++ER
Sbjct: 487 ---VANLDGSYRVTLITENLGRPRGIALDPTVGYLFFSD--------WESLSGEPKVERA 535
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
MDGSNR ++ TK+ +P G+TLD+ +RVY+ DS+ D+I+ YDG R+ V+
Sbjct: 536 FMDGSNRKDLVKTKLGFPGGITLDLIAKRVYWVDSRYDYIETVTYDGIQRKTVM 589
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 150/321 (46%), Gaps = 67/321 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAE---CKHKFGLCSNTCHPTPLGA-LCTCPPG-E 59
C+ VCD DC N DE GC++ + C K +C C +G +C+C G +
Sbjct: 3890 CIPQDNVCDDVNDCGNYFDET-GCNVGKERTCAEK--ICEQNCTQLNVGGFICSCRSGFK 3946
Query: 60 ILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY--VLEYDNHTCKAINHSAAF 117
+ + D +C+D+NECE+ G CSQ C NTKGSY C C +G+ V E C A S
Sbjct: 3947 VGAVDRNSCEDINECEEFGICSQKCRNTKGSYECLCADGFRSVSEDFGKRCAAEGDSPLL 4006
Query: 118 LI-----------ISNRHSILVADLE---------------------------------- 132
L+ S R S + D E
Sbjct: 4007 LLPDNVRIRKYNLTSERFSEYLQDEEHIQALDYDWDPEGIGLSVVYYTVRGQGSGFGAIK 4066
Query: 133 -------EKGKDHRAQ--DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR 183
E G ++ Q D+ + + +GLA DW+G HIYW D + RIEV +G R
Sbjct: 4067 RAYIPNFESGNNNLVQEVDLKLKYVFQPDGLAVDWVGRHIYWSDVKNQRIEVAKLDGRYR 4126
Query: 184 IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
L ++ QP + ++P G ++WTDWG+ P+IE M+G +R+ ++S + WP GL
Sbjct: 4127 KWLVTSSLDQPAAIAVNPKLGL--MYWTDWGKQPKIESAWMNGEHRTVLVSNYLGWPTGL 4184
Query: 244 TLD-IATRRVYFADSKLDFID 263
T+D + R+Y++D K D I+
Sbjct: 4185 TIDYLNDDRIYWSDFKEDIIE 4205
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 117/471 (24%), Positives = 184/471 (39%), Gaps = 65/471 (13%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-----KFGLC---------SNTC--- 44
A +C+ T VCDG DC +G DE C + C +GLC N C
Sbjct: 2912 ARKCIPQTWVCDGDADCADGYDERQNCTRSSCSENEFTCSYGLCIPSSFRCDRHNDCGDY 2971
Query: 45 -------HPTPLGALCTCPPGEILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGS---YIC 93
+ T TC G + D V C + N+C + +C + + +
Sbjct: 2972 SDERDCLYQTCQAHQFTCQNGRCIFRDFV-CDEENDCGDGSDELDHLCHTPEATCPPHYF 3030
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILV---ADLEEKGKDHRAQDIVVSGL-D 149
CN G+ +E + K NH S+ + +D G DH D +VS
Sbjct: 3031 RCNNGHCVEME----KLCNHYDDCSDNSDEKGCGINECSDPSSSGCDHNCTDTIVSFFCS 3086
Query: 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI--VLAKDN---ITQPRGMMLDPSPG 204
+ G +D R VC + N I + K + I +P G +
Sbjct: 3087 CLPGYKLMSDKRTCVDIDECKERPFVCSQRCENEIGSYICKCDPGYIREPDGRSCRQTSS 3146
Query: 205 TR-WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+L +++ + + +DGS S I+ + L D R+Y+ D + I+
Sbjct: 3147 IEPYLIFSN---RYYLRNLTVDGSFYSLILQ-GLGNAVALDFDRVEERLYWIDEEKGVIE 3202
Query: 264 CKSL---EIKTNVNYST----------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
L + +T ++Y + RKLYW+D G L + N D
Sbjct: 3203 RMFLNKTDRETIISYKLQNPQGLAVDWVSRKLYWLDSSLKG--LFVSDLNGDRHRKLAQH 3260
Query: 311 SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 370
L D G++ + +++WTDW I R+GMDG+N+S IISTKI P
Sbjct: 3261 CVDLNNTFCFDYPRGIVLHPKYG---YVYWTDWTHRAYIGRVGMDGTNKSVIISTKIMRP 3317
Query: 371 NGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
NG+T+D +Y+ DS L +I++ + +G R V L F + D
Sbjct: 3318 NGITIDYTNDLLYWTDSHLGYIEYSDLEGHNRHPVYDQTLPYPFAVTIFED 3368
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 110/242 (45%), Gaps = 17/242 (7%)
Query: 33 CKHKFGLCSNTCHPTPLGAL-CTCPPGEILSNDSVTCQDMNE-------CEQPGYCSQMC 84
C C C P P GA C C G L+ D TC N G+ +
Sbjct: 2017 CSQNRNACQQICLPVPGGAFSCACATGFQLNPDYRTCSPHNSFIVVSMLTAIRGFSLSLL 2076
Query: 85 TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIV 144
+++ + VL D H + F S R + ++ G +IV
Sbjct: 2077 DHSEAMVPVAGQGRNVLHADVHVSSGFIYWCDFSS-SVRSYNAIRRIKPDGSS--LTNIV 2133
Query: 145 VSGLDL--VEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLD 200
G+ + G+A DW+ G++Y+ ++ IEV N T R VL K + PR +++D
Sbjct: 2134 TEGIGETGIRGIAVDWVAGNLYFTNAFAYETLIEVLRINTTYRRVLLKATVDLPRHIIVD 2193
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P R+LFW D+G+NP+IER +D +NR+ ++S I P GL +D ++ +Y+ D LD
Sbjct: 2194 PK--NRYLFWADYGQNPKIERSFLDCTNRTVLVSDGIVSPRGLAIDHSSGYIYWVDDSLD 2251
Query: 261 FI 262
I
Sbjct: 2252 LI 2253
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 74/125 (59%), Gaps = 4/125 (3%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ S + +G+AYDWI IY+ D I E+GT R V+A+ + +PR +++DP
Sbjct: 2455 VITSDIGTSDGIAYDWINRRIYYSDYFNETINSISEDGTQRTVIAR--VAKPRAIVIDPC 2512
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W DW N +IER + G+ R I+++ + WP GLTLD +Y+AD+ L I
Sbjct: 2513 RG--YLYWADWNGNAKIERATLGGNFRVPIVTSNLVWPKGLTLDYEEDLLYWADASLRQI 2570
Query: 263 DCKSL 267
+ +L
Sbjct: 2571 ERSTL 2575
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 126/512 (24%), Positives = 194/512 (37%), Gaps = 130/512 (25%)
Query: 5 CVNLTKVCDGKTDCPNGADE-----------GPG---CDLAECKHKFGLCSNT------- 43
C+ L CDG DC +G+DE P CD C + LC+
Sbjct: 3804 CIQLNWKCDGDNDCGDGSDEELHLCSDVPCESPDRFRCDNNRCIYSSKLCNTVDNCGDGS 3863
Query: 44 ------CHPTPLGALCT-----CPPGEILSNDSVTCQDMNEC----EQPG---------- 78
CH P CT C G + D+V C D+N+C ++ G
Sbjct: 3864 DERAEHCH-EPTHKPCTENEFKCDNGLCIPQDNV-CDDVNDCGNYFDETGCNVGKERTCA 3921
Query: 79 --YCSQMCTNTK-GSYICSCNEGY-VLEYDNHTCKAINHSAAFLIISNR-------HSIL 127
C Q CT G +ICSC G+ V D ++C+ IN F I S + + L
Sbjct: 3922 EKICEQNCTQLNVGGFICSCRSGFKVGAVDRNSCEDINECEEFGICSQKCRNTKGSYECL 3981
Query: 128 VADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
AD + + G D L D + Y L S + DE + A
Sbjct: 3982 CADGFRSVSEDFGKRCAAEG-DSPLLLLPDNVRIRKYNLTSERFSEYLQDEEH----IQA 4036
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK-----IYWPNG 242
D P G+ L T + +G R + N + + ++ P+G
Sbjct: 4037 LDYDWDPEGIGLSVVYYTVRGQGSGFGAIKRAYIPNFESGNNNLVQEVDLKLKYVFQPDG 4096
Query: 243 LTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMD 302
L +D R +Y++D K +I A +D
Sbjct: 4097 LAVDWVGRHIYWSDVKNQ----------------------------------RIEVAKLD 4122
Query: 303 GSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
G LV+ L + A+A++ + G++Y WTDWG+ P+IE M+G +R+
Sbjct: 4123 GRYRKWLVTSSLDQPAAIAVNPKLGLMY-----------WTDWGKQPKIESAWMNGEHRT 4171
Query: 361 TIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLM 419
++S + WP GLT+D + R+Y++D K D I+ +DGT R +V+ M ++ D+
Sbjct: 4172 VLVSNYLGWPTGLTIDYLNDDRIYWSDFKEDIIETMKHDGTVR-RVVSHGAMKPYSLDI- 4229
Query: 420 GDNGVPALALDLENGMLYYSTEGAEFLKTPLF 451
EN + + S E E K F
Sbjct: 4230 -----------FENHLYWISKEKGEVYKQDKF 4250
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 134/306 (43%), Gaps = 58/306 (18%)
Query: 69 QDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH--------------- 113
QD CEQ S N + C C G+ L+ D C A+ +
Sbjct: 659 QDNGGCEQICVLSHRTDNNGLGFRCKCTFGFQLDADGLHCAAVQNFLLFSSQRTVRGIPF 718
Query: 114 --------------SAAFLI----ISNRHSILVADLEE-----KGKDHRAQDIVVSG-LD 149
S++F + + ++ +D+ E + D ++I+V ++
Sbjct: 719 TLSTQEDVMVPVTGSSSFFVGIDFDARSSTVFFSDISEHLIFEQKIDGTGREILVPNRVE 778
Query: 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
VE LA+DWI ++YW DS + V +R + ++ PR +++ P G ++F
Sbjct: 779 NVESLAFDWISRNLYWTDSHYKSVSVMRLADKSRRTIVP-LLSNPRSIVVHPVAG--YIF 835
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKS--- 266
++DW +I R DGS+ I++T + WPNGL +D R+Y+ D+ D I+ +
Sbjct: 836 FSDWFRPAKIMRAWGDGSHLLPIVNTTLGWPNGLAIDWDALRLYWVDAFFDKIEHSTFNG 895
Query: 267 --------LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
+E T+ T+F++ + + +++ K DG + +++ SG +
Sbjct: 896 LDRRILSHIEEMTHPFGITLFKEYVFFTDWRLNAIVRVRKT--DGGDKTVIRSGI---TM 950
Query: 319 ALDLEN 324
AL+L++
Sbjct: 951 ALNLKS 956
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 136/333 (40%), Gaps = 97/333 (29%)
Query: 80 CSQMCTNTKG-SYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH 138
C Q+C G ++ C+C G+ L D TC N +F
Sbjct: 2024 CQQICLPVPGGAFSCACATGFQLNPDYRTCSPHN---SF--------------------- 2059
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
IVVS L + G + + LD + V G R VL D
Sbjct: 2060 ----IVVSMLTAIRGFS-------LSLLDHSEAMVPV---AGQGRNVLHAD--------- 2096
Query: 199 LDPSPGTRWLFWTDWGENPR----IERIGMDGSNRSTIISTKIYWP--NGLTLDIATRRV 252
+ S G +++W D+ + R I RI DGS+ + I++ I G+ +D +
Sbjct: 2097 VHVSSG--FIYWCDFSSSVRSYNAIRRIKPDGSSLTNIVTEGIGETGIRGIAVDWVAGNL 2154
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
YF ++ F +E+ + +T +R++ + KA +D
Sbjct: 2155 YFTNA---FAYETLIEV---LRINTTYRRV-------------LLKATVD---------- 2185
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
L + +D +N R+LFW D+G+NP+IER +D +NR+ ++S I P G
Sbjct: 2186 -LPRHIIVDPKN-----------RYLFWADYGQNPKIERSFLDCTNRTVLVSDGIVSPRG 2233
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
L +D ++ +Y+ D LD I ++DG Q +
Sbjct: 2234 LAIDHSSGYIYWVDDSLDLIARIHFDGEETQVI 2266
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 32/184 (17%)
Query: 240 PNGLTLDIATRRVYFA------DSKLDFIDCKS-----------LEIKTNVNYSTIFRKL 282
P L D R+YF D ++ ++ S + + Y I R++
Sbjct: 2416 PIALAYDSINNRIYFTQSVNFFDGQISYVSLSSGIHTPTVITSDIGTSDGIAYDWINRRI 2475
Query: 283 YWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD 342
Y+ D I + DG+ +++ A+ +D C +L+W D
Sbjct: 2476 YYSDYFNE----TINSISEDGTQRTVIARVAKPRAIVID-----------PCRGYLYWAD 2520
Query: 343 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
W N +IER + G+ R I+++ + WP GLTLD +Y+AD+ L I+ GT R
Sbjct: 2521 WNGNAKIERATLGGNFRVPIVTSNLVWPKGLTLDYEEDLLYWADASLRQIERSTLTGTQR 2580
Query: 403 QQVI 406
+ ++
Sbjct: 2581 EVLV 2584
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 85/206 (41%), Gaps = 45/206 (21%)
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
+F++D E+ E+ +DG+ R ++ ++ L D +R +Y+ DS + L
Sbjct: 749 VFFSDISEHLIFEQ-KIDGTGREILVPNRVENVESLAFDWISRNLYWTDSHYKSVSVMRL 807
Query: 268 EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGML 327
K+ TI VPL SN +V +
Sbjct: 808 ADKSR---RTI-------------VPLL--------SNPRSIVVHPV------------- 830
Query: 328 YYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 387
++F++DW +I R DGS+ I++T + WPNGL +D R+Y+ D+
Sbjct: 831 -------AGYIFFSDWFRPAKIMRAWGDGSHLLPIVNTTLGWPNGLAIDWDALRLYWVDA 883
Query: 388 KLDFIDFCNYDGTGRQQVILIDLMVE 413
D I+ ++G R+ + I+ M
Sbjct: 884 FFDKIEHSTFNGLDRRILSHIEEMTH 909
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 126/336 (37%), Gaps = 87/336 (25%)
Query: 22 ADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTC-QDMNECEQPGYC 80
+ E P C A C H L S P C CP G LS DSV C +D EQP
Sbjct: 1694 SSENP-CASARCSHLCLLSSQG----PNFYSCVCPSGWTLSADSVNCLRD----EQP--- 1741
Query: 81 SQMCTNTKGSYICSCNEGYVLEYD-NHTCKAINHSAAFLIISNRHSILVADLEE------ 133
++ + E + N K+ + + N + + D E+
Sbjct: 1742 ----------FLITVRENIIFGISLNPDVKSNDAMVPIAGVKNGYDVEFDDSEQYIYWAE 1791
Query: 134 -KGKDHRAQD--------IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR- 183
G+ HR + +S L GLA DWI G++Y + I+V G R
Sbjct: 1792 NPGEIHRVKTDGTNRTEFASLSMLGSSTGLALDWISGNLYTTNPGTQSIQVSTLRGDTRY 1851
Query: 184 --IVLAKD----NITQPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRSTII 233
++ D + P G+ +DP+ G L+W+D G + +I MDG++ +
Sbjct: 1852 RKTLITNDGTALGVGYPIGIAVDPARGK--LYWSDQGTDSGVPAKIASASMDGTSLKNLF 1909
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
+ LTLDI +++Y+A + G GV
Sbjct: 1910 LGNLDHLESLTLDIKEQKLYWAVT-------------------------------GTGV- 1937
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
I + N+DG+ ILV QL + + + LYY
Sbjct: 1938 --IERGNVDGTERMILVY-QLSHPWGVAVFDSFLYY 1970
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 40/199 (20%)
Query: 213 WGENP-RIERIGMDGSNRSTIISTKIYWPN-GLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DG+NR+ S + + GL LD + +Y + +S+++
Sbjct: 1789 WAENPGEIHRVKTDGTNRTEFASLSMLGSSTGLALDWISGNLYTTNPGT-----QSIQVS 1843
Query: 271 TNVNYSTIFRKLYWIDEG---GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGML 327
T + T +RK ++G G G P+ I A+D G L
Sbjct: 1844 T-LRGDTRYRKTLITNDGTALGVGYPIGI----------------------AVDPARGKL 1880
Query: 328 YYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 387
Y+S TD G +I MDG++ + + LTLDI +++Y+A +
Sbjct: 1881 YWSDQG-------TDSGVPAKIASASMDGTSLKNLFLGNLDHLESLTLDIKEQKLYWAVT 1933
Query: 388 KLDFIDFCNYDGTGRQQVI 406
I+ N DGT R ++
Sbjct: 1934 GTGVIERGNVDGTERMILV 1952
>gi|281348191|gb|EFB23775.1| hypothetical protein PANDA_004638 [Ailuropoda melanoleuca]
Length = 4540
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/301 (39%), Positives = 165/301 (54%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCDG DCPNG DE P C+ C G C++ C P GA C CP G +L+ND
Sbjct: 1217 CVNLSAVCDGIFDCPNGTDESPLCNQDSCSDFNGGCTHQCVQGPFGAQCLCPSGYLLAND 1276
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++EC PG+CSQ C N +GS+ C C+E Y L+ D TCK + L++++++
Sbjct: 1277 SKTCEDIDECNVPGFCSQHCFNMRGSFRCWCDEEYTLDTDGRTCKVTGSESLLLLVASQN 1336
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
IL ++ + G D R
Sbjct: 1337 QILADNITSQFHNIYSIVQNGSHIVALDFDSISGRVFWSDGSQGKIWSAFQNGTDRRV-- 1394
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I SG+ + E + DW+G ++YW D L IEV +G++R VL N++ PRG+ LDP
Sbjct: 1395 IQNSGVTMTESIVVDWVGRNLYWTDYSLETIEVSKLDGSHRTVLISRNVSNPRGLALDPR 1454
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+FW+DWG +PRIER MDGS R+ I+ KI+WP+G+T+D R +YF DS LD+I
Sbjct: 1455 ISDHLMFWSDWGHHPRIERASMDGSLRTVIVEDKIFWPSGITIDYPNRLLYFIDSYLDYI 1514
Query: 263 D 263
D
Sbjct: 1515 D 1515
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 116/342 (33%), Positives = 178/342 (52%), Gaps = 63/342 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+C+ + VCDG DCP G DE G CD+ C C CH +P G +C CPPG
Sbjct: 172 KCIPIGNVCDGTIDCPGGEDENNSTKGRYCDVNLCS--LLSCEYQCHMSPNGGMCYCPPG 229
Query: 59 EIL-SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I+ N++ C D N+C+ G C Q+C + G + C C EGYVLE+ H I+ A
Sbjct: 230 FIVDQNNTRNCVDFNDCQIWGVCDQICEDRIGHHQCHCAEGYVLEHQRHCKADISSEQAS 289
Query: 118 LIISNRHSILVADLEE-------KGKDH-------------------RAQDIVVS----- 146
+I SN +L+ D+ + ++H QD V S
Sbjct: 290 VIFSNGRDLLIGDIHGWTFSMLVRSQNHGMAVGVDFHYHLHRVFWTDTVQDKVFSVDIDG 349
Query: 147 -------GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
LD E +A DW+ +Y +++++N I++ + +G++R++L +N+ PRG+ L
Sbjct: 350 LNIQEVVSLDDPENVAVDWVNNKLYLVETKINCIDMVNLDGSHRVILITENLGHPRGIAL 409
Query: 200 DPSPGTRWLFWTDW----GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
DP+ G +LF++DW GE P++ER MDG+NR ++ TK+ WP G+TLDI ++RVY+
Sbjct: 410 DPTVG--YLFFSDWESLSGE-PKVERAFMDGTNRKDLVKTKLGWPAGITLDIVSKRVYWV 466
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
D + D+I+ V Y I RK + +GG+ VP G
Sbjct: 467 DCRFDYIE--------TVTYDGIQRKT--VVQGGSLVPHPFG 498
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/313 (35%), Positives = 157/313 (50%), Gaps = 53/313 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+N+ +VC+ DC + +DE GC + EC + C C T C+C PG L +
Sbjct: 2978 CINMGEVCNRLNDCLDNSDEK-GCGVNECNDPRLSGCDQNCTDTLTSFYCSCRPGYKLMS 3036
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D +C D++EC E P CSQ C N GSYIC C GY+ E D +C+ ++ +LI SN
Sbjct: 3037 DKRSCDDIDECKETPFVCSQKCENVMGSYICKCAPGYIREPDGKSCRQNSNIDPYLIFSN 3096
Query: 123 R------------HSILVA--------------------DLEEK-------GKDHRAQDI 143
R +S+++ D E K K +R + +
Sbjct: 3097 RYYLRNLTTDGHFYSLILQGLGNAVALDFDRVEKRLYWIDTENKVIERMFLNKTNR-ETV 3155
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK----DNIT----QPR 195
+ L E LA DW+ +YW+D+ LN + V D +G R LA+ DN T PR
Sbjct: 3156 INYKLPAAESLAVDWVARKLYWVDAYLNCLSVSDLDGRYRRKLAEHCVDDNYTFCFDHPR 3215
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G+ L P G ++W DW I R+GMDG+N+S IISTKI WPNG+T+D +Y+A
Sbjct: 3216 GIALHPQYGH--VYWADWAHRAYIGRVGMDGTNKSVIISTKIEWPNGITIDYTNDLLYWA 3273
Query: 256 DSKLDFIDCKSLE 268
D+ L +I+ LE
Sbjct: 3274 DAHLGYIEYSDLE 3286
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 168/412 (40%), Gaps = 107/412 (25%)
Query: 50 GALCTCPPGEILSN-DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH-- 106
G +C+C PG S D +C D+NECEQ G C Q C NTKGSY CSC EG+ E D +
Sbjct: 3875 GFICSCRPGFKASTLDRNSCDDINECEQFGVCPQNCQNTKGSYECSCAEGFRSESDQYGK 3934
Query: 107 TCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
C A + L+ N EK D+ + G + ++ + YDW
Sbjct: 3935 RCAADGNPPLLLLPENVRIRKYNLSSEKFSDY------LEGEERIQAVDYDW-------- 3980
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPR--IERIGM 224
P G+ L T +D+G R I
Sbjct: 3981 --------------------------DPEGIGLSVVYYTVLGHGSDFGAIKRAYIPNFES 4014
Query: 225 DGSNRSTIISTKIYW---PNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRK 281
D +N + ++ + + P+GL +D R +Y++D+K I+ L+ + +RK
Sbjct: 4015 DTNNLVSEVNLNLKYIMQPDGLAVDWVGRHIYWSDAKTKRIEVAELDGR--------YRK 4066
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
W+ G P A+++V+ +L G++Y WT
Sbjct: 4067 --WLISNGLNQP------------AAVVVNPKL----------GLMY-----------WT 4091
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI-ATRRVYFADSKLDFIDFCNYDGT 400
DWG P+IE MDG +R ++ + WP GL +D R+Y++D K + I+ +DGT
Sbjct: 4092 DWGGEPKIESAWMDGQHRKILVQEDLGWPTGLAIDYWNNDRIYWSDFKENNIETIKHDGT 4151
Query: 401 GRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYY-STEGAEFLKTPLF 451
R+ ++ + + +LD+ G Y+ S + E K F
Sbjct: 4152 DRR--------------IVANAAMNPYSLDIFEGQFYWISKDKGEVWKQDKF 4189
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 120/259 (46%), Gaps = 53/259 (20%)
Query: 119 IISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDE 178
+ S IL +L + R+ ++SG +G+A+DWI IY+ D I E
Sbjct: 2329 LASGNGQILYVNLNSQT---RSPTAIISGRGNPDGIAFDWINRRIYYSDYINQTINSMAE 2385
Query: 179 NGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY 238
+G+ R V+A ++++PR ++LDP G +++WTDWG N +IER + G+ R I+++ +
Sbjct: 2386 DGSQRTVIA--HVSKPRAIVLDPCRG--YMYWTDWGTNAKIERATLGGNFRIPIVNSSLV 2441
Query: 239 WPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGK 298
WPNGLTLD +Y+AD+ L KI +
Sbjct: 2442 WPNGLTLDHENDLLYWADASLQ----------------------------------KIER 2467
Query: 299 ANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSN 358
+ + G+ ++V+ ++ +L L ++++WTDW DGS
Sbjct: 2468 STLTGTQREVIVN-TVFHPFSLTLYG-----------QYIYWTDWNTQKIYRANKYDGSG 2515
Query: 359 RSTIISTKIYWPNGLTLDI 377
+ + + + PNG+ + I
Sbjct: 2516 QMALTMSLPFRPNGIRVAI 2534
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 59/267 (22%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G L DN TC ++FLI+S + HS
Sbjct: 1919 CQQICLPIPGGLFSCACASGLKLNPDNRTCSPY---SSFLIVSMLSIIRGFSLDFSDHSE 1975
Query: 127 LVADLEEKGKDHRAQDIVVS-------------------------------------GLD 149
+ + +G++ D+ VS G +
Sbjct: 1976 AMVPVAGEGRNALHVDVDVSSGFIYWCDFSSSVTSQNAIRRIKPNGSGFMNIVTDGIGEN 2035
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ G++Y+ ++ ++ IEV N T R +L K +PR +++DP R+
Sbjct: 2036 GVRGIAVDWVAGNLYFTNAFMSETLIEVLRINTTYRRILLKTTADRPRDIVVDPK--NRY 2093
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
LFW D+G+NP+IER +D +NR+ ++S I P GL +D + +Y+ D LD I +
Sbjct: 2094 LFWADYGQNPKIERSFLDCTNRTVLVSEGIVTPRGLAVDHSNGYIYWVDDSLDIIARIGI 2153
Query: 268 EIKTN--VNYSTIFRKLYWIDEGGNGV 292
E + + + Y + Y I GN +
Sbjct: 2154 EAEESEIIGYGNRYPTPYAITVFGNSI 2180
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 104/240 (43%), Gaps = 45/240 (18%)
Query: 65 SVTCQDMNE-CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF------ 117
S C D N CE S N Y C C G+ L+ DN C A+ F
Sbjct: 552 SNPCGDNNGGCEHVCVLSHRTDNDGLGYRCRCTLGFSLDVDNRHCVAVKQFLIFSSEVAV 611
Query: 118 ----LIISNRHSILVA-------------DLEEK-------GKDH-RAQDIVVSGLDL-- 150
+S + ++V D +EK KD Q+I +G ++
Sbjct: 612 RGIPFNLSTQEDVIVPVTGSPSFFIGIDFDAQEKTIFFSDTAKDMIYKQNINGTGREILT 671
Query: 151 ------VEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSP 203
VE L +DWI ++YW D+ + V + + R ++ K + PR +++ P
Sbjct: 672 ANRVESVESLTFDWISKNLYWTDASYRSVSVMRLADKSRRAIIQK--LNNPRSIVVHPIA 729
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G ++F+TDW +I R DGSN I++T + WPNGL +D R+Y+ D+ D I+
Sbjct: 730 G--YIFFTDWLHPAKIMRAWSDGSNLLPIVNTTLGWPNGLAIDWGALRLYWVDAFFDKIE 787
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 16/148 (10%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+ + I R++Y+ D + I DGS +++ A+ LD
Sbjct: 2361 IAFDWINRRIYYSDY----INQTINSMAEDGSQRTVIAHVSKPRAIVLD----------- 2405
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
C +++WTDWG N +IER + G+ R I+++ + WPNGLTLD +Y+AD+ L I
Sbjct: 2406 PCRGYMYWTDWGTNAKIERATLGGNFRIPIVNSSLVWPNGLTLDHENDLLYWADASLQKI 2465
Query: 393 DFCNYDGTGRQQVILIDLMVEFTNDLMG 420
+ GT R +VI+ + F+ L G
Sbjct: 2466 ERSTLTGTQR-EVIVNTVFHPFSLTLYG 2492
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 148/339 (43%), Gaps = 61/339 (17%)
Query: 80 CSQMC---TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
CS +C + Y C C G+ L +D+ TC + FLI I L + K
Sbjct: 1601 CSHLCLLSSQRPHLYSCVCPSGWSLSHDSVTC--LKDDQPFLITIRYSIIFGISLNPEVK 1658
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS--RLNRIEVCDENGTNRIVLA-KDNITQ 193
+ A + + ++ + + +D IYW+++ ++R++ +GTNR VLA +
Sbjct: 1659 SNDAMVPIAAVMNGYD-VEFDDSEQFIYWVENPGEIHRVKT---DGTNRTVLASLTSSGS 1714
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS--NRSTIISTKIYWPNGLTLDIATRR 251
+ LD ++ L++TD E P IE + + G R T+I++ +G L + +
Sbjct: 1715 SMSLALDWI--SKNLYYTD-PETPSIEVLKLQGDVRYRKTLITS-----DGTALGVGS-- 1764
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN-GVPLKIGKANMDGSNASILV 310
+ + KLYW D+G + G+P KI ANMDG+ +L
Sbjct: 1765 ------------------PVGITVDPVNGKLYWSDQGTDSGIPAKIASANMDGTFPKVLF 1806
Query: 311 SGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY 368
+G L E + LD+E LY++ IER +DG+NR I+ +
Sbjct: 1807 TGNLEHLEFITLDIEEQKLYWAVTS------------TGVIERGNVDGTNR-MILVNHLS 1853
Query: 369 WPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
P G+ + +Y+ D + I+ + TG +V+L
Sbjct: 1854 HPWGIA--VYDSFLYYIDEHYEVIERVD-KATGANKVVL 1889
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 27/185 (14%)
Query: 242 GLTLDIATRRVYFADSKLDFI-------------DCKSLEIKTNVNYSTIFRKLYWIDEG 288
G+ D + ++F+D+ D I +E ++ + I + LYW D
Sbjct: 637 GIDFDAQEKTIFFSDTAKDMIYKQNINGTGREILTANRVESVESLTFDWISKNLYWTDAS 696
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
V + D S +I+ ++ + G ++F+TDW +
Sbjct: 697 YRSVSVM---RLADKSRRAIIQKLNNPRSIVVHPIAG-----------YIFFTDWLHPAK 742
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I R DGSN I++T + WPNGL +D R+Y+ D+ D I+ +DG R+ + I
Sbjct: 743 IMRAWSDGSNLLPIVNTTLGWPNGLAIDWGALRLYWVDAFFDKIEHSTFDGLDRRNLGHI 802
Query: 409 DLMVE 413
M
Sbjct: 803 QQMTH 807
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
R+LFW D+G+NP+IER +D +NR+ ++S I P GL +D + +Y+ D LD I
Sbjct: 2092 RYLFWADYGQNPKIERSFLDCTNRTVLVSEGIVTPRGLAVDHSNGYIYWVDDSLDII 2148
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 343 WGENP-RIERIGMDGSNRSTIISTKIYWPNG-LTLDIATRRVYFADSKLDFIDFCNYDGT 400
W ENP I R+ DG+NR+ + S + L LD ++ +Y+ D + I+ G
Sbjct: 1686 WVENPGEIHRVKTDGTNRTVLASLTSSGSSMSLALDWISKNLYYTDPETPSIEVLKLQGD 1745
Query: 401 GRQQVILIDLMVEFTND--LMGDNGVPALALDLENGMLYYSTEGAE 444
R + LI T+D +G + +D NG LY+S +G +
Sbjct: 1746 VRYRKTLI------TSDGTALGVGSPVGITVDPVNGKLYWSDQGTD 1785
>gi|301762274|ref|XP_002916562.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Ailuropoda melanoleuca]
Length = 4697
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/301 (39%), Positives = 165/301 (54%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCDG DCPNG DE P C+ C G C++ C P GA C CP G +L+ND
Sbjct: 1372 CVNLSAVCDGIFDCPNGTDESPLCNQDSCSDFNGGCTHQCVQGPFGAQCLCPSGYLLAND 1431
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++EC PG+CSQ C N +GS+ C C+E Y L+ D TCK + L++++++
Sbjct: 1432 SKTCEDIDECNVPGFCSQHCFNMRGSFRCWCDEEYTLDTDGRTCKVTGSESLLLLVASQN 1491
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
IL ++ + G D R
Sbjct: 1492 QILADNITSQFHNIYSIVQNGSHIVALDFDSISGRVFWSDGSQGKIWSAFQNGTDRRV-- 1549
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I SG+ + E + DW+G ++YW D L IEV +G++R VL N++ PRG+ LDP
Sbjct: 1550 IQNSGVTMTESIVVDWVGRNLYWTDYSLETIEVSKLDGSHRTVLISRNVSNPRGLALDPR 1609
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+FW+DWG +PRIER MDGS R+ I+ KI+WP+G+T+D R +YF DS LD+I
Sbjct: 1610 ISDHLMFWSDWGHHPRIERASMDGSLRTVIVEDKIFWPSGITIDYPNRLLYFIDSYLDYI 1669
Query: 263 D 263
D
Sbjct: 1670 D 1670
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 116/342 (33%), Positives = 178/342 (52%), Gaps = 63/342 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+C+ + VCDG DCP G DE G CD+ C C CH +P G +C CPPG
Sbjct: 327 KCIPIGNVCDGTIDCPGGEDENNSTKGRYCDVNLCS--LLSCEYQCHMSPNGGMCYCPPG 384
Query: 59 EIL-SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I+ N++ C D N+C+ G C Q+C + G + C C EGYVLE+ H I+ A
Sbjct: 385 FIVDQNNTRNCVDFNDCQIWGVCDQICEDRIGHHQCHCAEGYVLEHQRHCKADISSEQAS 444
Query: 118 LIISNRHSILVADLEE-------KGKDH-------------------RAQDIVVS----- 146
+I SN +L+ D+ + ++H QD V S
Sbjct: 445 VIFSNGRDLLIGDIHGWTFSMLVRSQNHGMAVGVDFHYHLHRVFWTDTVQDKVFSVDIDG 504
Query: 147 -------GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
LD E +A DW+ +Y +++++N I++ + +G++R++L +N+ PRG+ L
Sbjct: 505 LNIQEVVSLDDPENVAVDWVNNKLYLVETKINCIDMVNLDGSHRVILITENLGHPRGIAL 564
Query: 200 DPSPGTRWLFWTDW----GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
DP+ G +LF++DW GE P++ER MDG+NR ++ TK+ WP G+TLDI ++RVY+
Sbjct: 565 DPTVG--YLFFSDWESLSGE-PKVERAFMDGTNRKDLVKTKLGWPAGITLDIVSKRVYWV 621
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
D + D+I+ V Y I RK + +GG+ VP G
Sbjct: 622 DCRFDYIE--------TVTYDGIQRKT--VVQGGSLVPHPFG 653
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/313 (35%), Positives = 157/313 (50%), Gaps = 53/313 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+N+ +VC+ DC + +DE GC + EC + C C T C+C PG L +
Sbjct: 3133 CINMGEVCNRLNDCLDNSDEK-GCGVNECNDPRLSGCDQNCTDTLTSFYCSCRPGYKLMS 3191
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D +C D++EC E P CSQ C N GSYIC C GY+ E D +C+ ++ +LI SN
Sbjct: 3192 DKRSCDDIDECKETPFVCSQKCENVMGSYICKCAPGYIREPDGKSCRQNSNIDPYLIFSN 3251
Query: 123 R------------HSILVA--------------------DLEEK-------GKDHRAQDI 143
R +S+++ D E K K +R + +
Sbjct: 3252 RYYLRNLTTDGHFYSLILQGLGNAVALDFDRVEKRLYWIDTENKVIERMFLNKTNR-ETV 3310
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK----DNIT----QPR 195
+ L E LA DW+ +YW+D+ LN + V D +G R LA+ DN T PR
Sbjct: 3311 INYKLPAAESLAVDWVARKLYWVDAYLNCLSVSDLDGRYRRKLAEHCVDDNYTFCFDHPR 3370
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G+ L P G ++W DW I R+GMDG+N+S IISTKI WPNG+T+D +Y+A
Sbjct: 3371 GIALHPQYGH--VYWADWAHRAYIGRVGMDGTNKSVIISTKIEWPNGITIDYTNDLLYWA 3428
Query: 256 DSKLDFIDCKSLE 268
D+ L +I+ LE
Sbjct: 3429 DAHLGYIEYSDLE 3441
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 168/412 (40%), Gaps = 107/412 (25%)
Query: 50 GALCTCPPGEILSN-DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH-- 106
G +C+C PG S D +C D+NECEQ G C Q C NTKGSY CSC EG+ E D +
Sbjct: 4032 GFICSCRPGFKASTLDRNSCDDINECEQFGVCPQNCQNTKGSYECSCAEGFRSESDQYGK 4091
Query: 107 TCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
C A + L+ N EK D+ + G + ++ + YDW
Sbjct: 4092 RCAADGNPPLLLLPENVRIRKYNLSSEKFSDY------LEGEERIQAVDYDW-------- 4137
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPR--IERIGM 224
P G+ L T +D+G R I
Sbjct: 4138 --------------------------DPEGIGLSVVYYTVLGHGSDFGAIKRAYIPNFES 4171
Query: 225 DGSNRSTIISTKIYW---PNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRK 281
D +N + ++ + + P+GL +D R +Y++D+K I+ L+ + +RK
Sbjct: 4172 DTNNLVSEVNLNLKYIMQPDGLAVDWVGRHIYWSDAKTKRIEVAELDGR--------YRK 4223
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
W+ G P A+++V+ +L G++Y WT
Sbjct: 4224 --WLISNGLNQP------------AAVVVNPKL----------GLMY-----------WT 4248
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI-ATRRVYFADSKLDFIDFCNYDGT 400
DWG P+IE MDG +R ++ + WP GL +D R+Y++D K + I+ +DGT
Sbjct: 4249 DWGGEPKIESAWMDGQHRKILVQEDLGWPTGLAIDYWNNDRIYWSDFKENNIETIKHDGT 4308
Query: 401 GRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYY-STEGAEFLKTPLF 451
R+ ++ + + +LD+ G Y+ S + E K F
Sbjct: 4309 DRR--------------IVANAAMNPYSLDIFEGQFYWISKDKGEVWKQDKF 4346
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 120/259 (46%), Gaps = 53/259 (20%)
Query: 119 IISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDE 178
+ S IL +L + R+ ++SG +G+A+DWI IY+ D I E
Sbjct: 2484 LASGNGQILYVNLNSQT---RSPTAIISGRGNPDGIAFDWINRRIYYSDYINQTINSMAE 2540
Query: 179 NGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY 238
+G+ R V+A ++++PR ++LDP G +++WTDWG N +IER + G+ R I+++ +
Sbjct: 2541 DGSQRTVIA--HVSKPRAIVLDPCRG--YMYWTDWGTNAKIERATLGGNFRIPIVNSSLV 2596
Query: 239 WPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGK 298
WPNGLTLD +Y+AD+ L KI +
Sbjct: 2597 WPNGLTLDHENDLLYWADASLQ----------------------------------KIER 2622
Query: 299 ANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSN 358
+ + G+ ++V+ ++ +L L ++++WTDW DGS
Sbjct: 2623 STLTGTQREVIVN-TVFHPFSLTLYG-----------QYIYWTDWNTQKIYRANKYDGSG 2670
Query: 359 RSTIISTKIYWPNGLTLDI 377
+ + + + PNG+ + I
Sbjct: 2671 QMALTMSLPFRPNGIRVAI 2689
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 59/267 (22%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G L DN TC ++FLI+S + HS
Sbjct: 2074 CQQICLPIPGGLFSCACASGLKLNPDNRTCSPY---SSFLIVSMLSIIRGFSLDFSDHSE 2130
Query: 127 LVADLEEKGKDHRAQDIVVS-------------------------------------GLD 149
+ + +G++ D+ VS G +
Sbjct: 2131 AMVPVAGEGRNALHVDVDVSSGFIYWCDFSSSVTSQNAIRRIKPNGSGFMNIVTDGIGEN 2190
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ G++Y+ ++ ++ IEV N T R +L K +PR +++DP R+
Sbjct: 2191 GVRGIAVDWVAGNLYFTNAFMSETLIEVLRINTTYRRILLKTTADRPRDIVVDPK--NRY 2248
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
LFW D+G+NP+IER +D +NR+ ++S I P GL +D + +Y+ D LD I +
Sbjct: 2249 LFWADYGQNPKIERSFLDCTNRTVLVSEGIVTPRGLAVDHSNGYIYWVDDSLDIIARIGI 2308
Query: 268 EIKTN--VNYSTIFRKLYWIDEGGNGV 292
E + + + Y + Y I GN +
Sbjct: 2309 EAEESEIIGYGNRYPTPYAITVFGNSI 2335
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 104/240 (43%), Gaps = 45/240 (18%)
Query: 65 SVTCQDMNE-CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF------ 117
S C D N CE S N Y C C G+ L+ DN C A+ F
Sbjct: 707 SNPCGDNNGGCEHVCVLSHRTDNDGLGYRCRCTLGFSLDVDNRHCVAVKQFLIFSSEVAV 766
Query: 118 ----LIISNRHSILVA-------------DLEEK-------GKDH-RAQDIVVSGLDL-- 150
+S + ++V D +EK KD Q+I +G ++
Sbjct: 767 RGIPFNLSTQEDVIVPVTGSPSFFIGIDFDAQEKTIFFSDTAKDMIYKQNINGTGREILT 826
Query: 151 ------VEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSP 203
VE L +DWI ++YW D+ + V + + R ++ K + PR +++ P
Sbjct: 827 ANRVESVESLTFDWISKNLYWTDASYRSVSVMRLADKSRRAIIQK--LNNPRSIVVHPIA 884
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G ++F+TDW +I R DGSN I++T + WPNGL +D R+Y+ D+ D I+
Sbjct: 885 G--YIFFTDWLHPAKIMRAWSDGSNLLPIVNTTLGWPNGLAIDWGALRLYWVDAFFDKIE 942
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 16/148 (10%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+ + I R++Y+ D + I DGS +++ A+ LD
Sbjct: 2516 IAFDWINRRIYYSDY----INQTINSMAEDGSQRTVIAHVSKPRAIVLD----------- 2560
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
C +++WTDWG N +IER + G+ R I+++ + WPNGLTLD +Y+AD+ L I
Sbjct: 2561 PCRGYMYWTDWGTNAKIERATLGGNFRIPIVNSSLVWPNGLTLDHENDLLYWADASLQKI 2620
Query: 393 DFCNYDGTGRQQVILIDLMVEFTNDLMG 420
+ GT R +VI+ + F+ L G
Sbjct: 2621 ERSTLTGTQR-EVIVNTVFHPFSLTLYG 2647
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 148/339 (43%), Gaps = 61/339 (17%)
Query: 80 CSQMC---TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
CS +C + Y C C G+ L +D+ TC + FLI I L + K
Sbjct: 1756 CSHLCLLSSQRPHLYSCVCPSGWSLSHDSVTC--LKDDQPFLITIRYSIIFGISLNPEVK 1813
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS--RLNRIEVCDENGTNRIVLA-KDNITQ 193
+ A + + ++ + + +D IYW+++ ++R++ +GTNR VLA +
Sbjct: 1814 SNDAMVPIAAVMNGYD-VEFDDSEQFIYWVENPGEIHRVKT---DGTNRTVLASLTSSGS 1869
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS--NRSTIISTKIYWPNGLTLDIATRR 251
+ LD ++ L++TD E P IE + + G R T+I++ +G L + +
Sbjct: 1870 SMSLALDWI--SKNLYYTD-PETPSIEVLKLQGDVRYRKTLITS-----DGTALGVGS-- 1919
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN-GVPLKIGKANMDGSNASILV 310
+ + KLYW D+G + G+P KI ANMDG+ +L
Sbjct: 1920 ------------------PVGITVDPVNGKLYWSDQGTDSGIPAKIASANMDGTFPKVLF 1961
Query: 311 SGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY 368
+G L E + LD+E LY++ IER +DG+NR I+ +
Sbjct: 1962 TGNLEHLEFITLDIEEQKLYWAVTS------------TGVIERGNVDGTNR-MILVNHLS 2008
Query: 369 WPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
P G+ + +Y+ D + I+ + TG +V+L
Sbjct: 2009 HPWGIA--VYDSFLYYIDEHYEVIERVD-KATGANKVVL 2044
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 27/185 (14%)
Query: 242 GLTLDIATRRVYFADSKLDFI-------------DCKSLEIKTNVNYSTIFRKLYWIDEG 288
G+ D + ++F+D+ D I +E ++ + I + LYW D
Sbjct: 792 GIDFDAQEKTIFFSDTAKDMIYKQNINGTGREILTANRVESVESLTFDWISKNLYWTDAS 851
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
V + D S +I+ ++ + G ++F+TDW +
Sbjct: 852 YRSVSVM---RLADKSRRAIIQKLNNPRSIVVHPIAG-----------YIFFTDWLHPAK 897
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I R DGSN I++T + WPNGL +D R+Y+ D+ D I+ +DG R+ + I
Sbjct: 898 IMRAWSDGSNLLPIVNTTLGWPNGLAIDWGALRLYWVDAFFDKIEHSTFDGLDRRNLGHI 957
Query: 409 DLMVE 413
M
Sbjct: 958 QQMTH 962
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
R+LFW D+G+NP+IER +D +NR+ ++S I P GL +D + +Y+ D LD I
Sbjct: 2247 RYLFWADYGQNPKIERSFLDCTNRTVLVSEGIVTPRGLAVDHSNGYIYWVDDSLDII 2303
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 343 WGENP-RIERIGMDGSNRSTIISTKIYWPNG-LTLDIATRRVYFADSKLDFIDFCNYDGT 400
W ENP I R+ DG+NR+ + S + L LD ++ +Y+ D + I+ G
Sbjct: 1841 WVENPGEIHRVKTDGTNRTVLASLTSSGSSMSLALDWISKNLYYTDPETPSIEVLKLQGD 1900
Query: 401 GRQQVILIDLMVEFTND--LMGDNGVPALALDLENGMLYYSTEGAE 444
R + LI T+D +G + +D NG LY+S +G +
Sbjct: 1901 VRYRKTLI------TSDGTALGVGSPVGITVDPVNGKLYWSDQGTD 1940
>gi|297668798|ref|XP_002812613.1| PREDICTED: low-density lipoprotein receptor-related protein 2 [Pongo
abelii]
Length = 4624
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/301 (40%), Positives = 165/301 (54%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCDG DCPNG DE P C+ C G C++ C P GA C CP G +L+ND
Sbjct: 1325 CVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHECVQEPFGAKCLCPLGFLLAND 1384
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++EC+ PG CSQ C N +GS+ CSC+ GY+LE D TCK + L++++++
Sbjct: 1385 SKTCEDIDECDIPGSCSQHCYNMRGSFRCSCDTGYMLESDGRTCKVTASESLLLLVASQN 1444
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+ + + G D R
Sbjct: 1445 KIIADSVTSQVHNIYSLVENGSYIVAVDFDSISGRIFWSDATQGKTWSAFQNGTDRRV-- 1502
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ S + L E +A DW+G ++YW D L IEV +G++R VL N+T PRG+ LDP
Sbjct: 1503 VFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKNLTNPRGLALDPR 1562
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
LFW+DWG +PRIER MDGS R+ I+ KI+WP GLT+D R +YF DS LD++
Sbjct: 1563 MNEHLLFWSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYM 1622
Query: 263 D 263
D
Sbjct: 1623 D 1623
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 177/353 (50%), Gaps = 69/353 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
RC+++ KVCDG DCP DE G C C C CH TP G C CPPG
Sbjct: 278 RCISIYKVCDGILDCPRREDENSTTTGKYCSTTLCSALN--CQYQCHETPYGGACFCPPG 335
Query: 59 EILS-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I++ NDS TC + ++C+ G C Q C + G ++C C EGY+LE + + A
Sbjct: 336 YIINHNDSRTCVEFDDCQIWGICDQKCESRPGHHLCHCEEGYILERGQYCKANDSFGEAS 395
Query: 118 LIISNRHSILVADLEEKGKDHR-------------------------------------- 139
+I SN +L+ D+ G+ R
Sbjct: 396 IIFSNGRDLLIGDIH--GRSFRILVESQNRGVAVGVAFHYHLQRVFWTDTVQNKVFSVDI 453
Query: 140 ----AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
Q+++ ++ E LA DW+ IY +++++NRI++ + +G+ R+ L +N+ PR
Sbjct: 454 NGLNIQEVLNVSVETPENLAVDWVNNKIYLVETKVNRIDMVNLDGSYRVTLITENLGHPR 513
Query: 196 GMMLDPSPGTRWLFWTDW----GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
G+ +DP+ G +LF++DW GE P++ER MDGSNR ++ TK+ WP G+TLD+ ++R
Sbjct: 514 GIAVDPTVG--YLFFSDWESLSGE-PKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKR 570
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
VY+ DS+ D+I+ V Y I RK + GG+ +P G + +G
Sbjct: 571 VYWVDSRFDYIE--------TVTYDGIQRKT--VVHGGSLIPHPFGISLFEGQ 613
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 183/410 (44%), Gaps = 96/410 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ + K+C+ DC + +DE GC + EC C + C T C+C PG L
Sbjct: 3089 RCIEMMKLCNHLDDCLDNSDE-KGCGINECHDPSISGCDHNCTDTLTSFYCSCHPGYKLM 3147
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P CSQ C N GS+IC C GY+ E D TC+ ++ +LI S
Sbjct: 3148 SDKRTCVDIDECTETPFVCSQKCENVIGSFICKCAPGYLREPDGKTCRQNSNIEPYLIFS 3207
Query: 122 NRH--------------------SILVADLEEKGK------------------DHRAQDI 143
NR+ +++ D + K + I
Sbjct: 3208 NRYYLRNLTIDGYFYSLILEGLGNVVALDFDRVEKRLYWIDTQRQVIERMFLNKTNKETI 3267
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPR 195
+ L E LA DW+ +YWLD+RL+ + V D NG +R++LA+ + PR
Sbjct: 3268 INHRLPAAESLAVDWVSRKLYWLDARLDGLFVSDLNGGHRLMLAQHCVDANNTFCFDNPR 3327
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G+ L P G +++W DWG I RIGMDG+N+S IISTK+ WPNG+T+D +Y+A
Sbjct: 3328 GLALHPQYG--YIYWADWGHRAYIGRIGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWA 3385
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ L +I+ LE G + ++ G L
Sbjct: 3386 DAHLGYIEYSDLE----------------------------------GHHRHMVYDGALP 3411
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ + +Y WTDW + DGSNR T+++T
Sbjct: 3412 HPFAITIFEDTIY-----------WTDWNTRTVEKGNKYDGSNRQTLVNT 3450
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 142/320 (44%), Gaps = 63/320 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLA-ECKHKFGLCSNTCHPTPLGA-LCTCPPG-EI 60
C+ VCD DC + +DE GC+ E +C C G +C+C G E
Sbjct: 3942 HCIPHDNVCDDADDCGDWSDE-LGCNRGKERTCAENICEQNCTQLNEGGFICSCTAGFET 4000
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN--HTCKAINHSAAFL 118
D +C D+NECEQ G C Q C NTKGSY C C +G+ D+ C A S L
Sbjct: 4001 NVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDHPGKRCAAEGSSPLLL 4060
Query: 119 IISN-----------RHSILVADLE----------------------------------- 132
+ N R S + D E
Sbjct: 4061 LPDNVRIRKYNLSSERFSEYLQDEEYIQAVDYDWDPEDIGLSVVYYTVRGEGSRFGAIKR 4120
Query: 133 ------EKGKDHRAQ--DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
E G ++ Q D+ + + +G+A DW+G HIYW D + RIEV +G R
Sbjct: 4121 AYIPNFESGHNNLVQEVDLKLKYVMQPDGIAVDWVGRHIYWSDVKNKRIEVAKLDGRYRK 4180
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L ++ QP + ++P G +FWTDWG+ P+IE M+G NR+ ++ + WP GL+
Sbjct: 4181 WLISTDLDQPAAIAVNPKLGL--MFWTDWGKEPKIESAWMNGENRNILVFEDLGWPTGLS 4238
Query: 245 LD-IATRRVYFADSKLDFID 263
+D + R+Y++D K D I+
Sbjct: 4239 IDYLNNDRIYWSDFKEDVIE 4258
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 114/253 (45%), Gaps = 61/253 (24%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G+ L DN +C N +F+++S + HS
Sbjct: 2029 CQQICLPVPGGLFSCACATGFKLNPDNRSCSPYN---SFIVVSMLSAIRGFSLELSDHSE 2085
Query: 127 LVADLEEKGKDHRAQDIVVS-------------------------------------GLD 149
+ + +G++ D+ VS G +
Sbjct: 2086 TMVPVAGQGRNALHVDVDVSSGFIYWCDFSSSVASDNAIRRIKPDGSSLTNIVTHGIGEN 2145
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ G++Y+ ++ ++ IEV N T R VL K + PR +++DP R+
Sbjct: 2146 GVRGIAVDWVAGNLYFTNAFVSETLIEVLRINTTYRRVLLKVTVDMPRHIVVDPK--NRY 2203
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
LFW D+G+ P+IER +D +NR+ ++S I P GL +D + VY+ D LD I
Sbjct: 2204 LFWADYGQRPKIERSFLDCTNRTVLVSEGIVTPRGLAVDRSDGYVYWVDDSLDII----A 2259
Query: 268 EIKTNVNYSTIFR 280
I+ N S + R
Sbjct: 2260 RIRINGENSEVIR 2272
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 75/125 (60%), Gaps = 4/125 (3%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V SG+ +G+A+DWI IY+ D I E+G+NR V+A+ + +PR ++LDP
Sbjct: 2463 VVASGIGTADGIAFDWITRRIYYSDYLNQTINSMAEDGSNRTVIAR--VPKPRAIVLDPC 2520
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W DW + +IER + G+ R I+++ + P+GLTLD +Y+ D+ L I
Sbjct: 2521 QG--YLYWADWDTHAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRI 2578
Query: 263 DCKSL 267
+ +L
Sbjct: 2579 ERSTL 2583
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 64/303 (21%)
Query: 68 CQDMNE-CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
C+D N CEQ S N + C C G+ L+ D C A+ + FLI S++ +I
Sbjct: 663 CKDNNGGCEQVCVLSHRTDNDGLGFRCKCTFGFQLDTDERRCIAVQN---FLIFSSQVAI 719
Query: 127 ----LVADLEEK-------------GKDHRAQDIVVSGLDL------------------- 150
+E G D AQD + D+
Sbjct: 720 RGIPFTLSTQEDVMVPVSGNPSFFVGIDFDAQDSTIFFSDMSKHMIFKQKIDGTGREILA 779
Query: 151 ------VEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSP 203
VE LA+DWI ++YW DS I V + T R V+ + PR +++ P
Sbjct: 780 ANRVENVESLAFDWISKNLYWTDSHYKSIGVMRLADKTRRTVVQY--LNNPRSVVVHPFA 837
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +LF+TDW +I R DGS+ +I+T + WPNGL +D A R+Y+ D+ D I+
Sbjct: 838 G--YLFFTDWFRPAKIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRLYWVDAYFDRIE 895
Query: 264 CKS-----------LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+ +E T+ IF + + + G +++ KA DG +++ SG
Sbjct: 896 HSTFDGLGRRRLGHIEQMTHPFGLAIFGEHLFFTDWRLGAIIRVRKA--DGGEMTVIRSG 953
Query: 313 QLY 315
Y
Sbjct: 954 IAY 956
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 177/452 (39%), Gaps = 96/452 (21%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT-----CPP 57
+RC+ +VC+G DC +G DE C+ PTP CT C
Sbjct: 3897 NRCIYGHEVCNGVDDCGDGTDETE----EHCRK----------PTP--KPCTEYEYKCGN 3940
Query: 58 GEILSNDSVTCQDMNECEQ----------------PGYCSQMCTN-TKGSYICSCNEGYV 100
G + +D+V C D ++C C Q CT +G +ICSC G+
Sbjct: 3941 GHCIPHDNV-CDDADDCGDWSDELGCNRGKERTCAENICEQNCTQLNEGGFICSCTAGFE 3999
Query: 101 LE-YDNHTCKAINHSAAFLIISNR-------HSILVADLEEKGKDHRAQDIVVSGLDLVE 152
+D +C IN F + + AD DH + G +
Sbjct: 4000 TNVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDHPGKRCAAEGSSPLL 4059
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
L D + Y L S + DE + A D P + G +++T
Sbjct: 4060 -LLPDNVRIRKYNLSSERFSEYLQDE----EYIQAVDYDWDPEDI------GLSVVYYTV 4108
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN 272
GE R I + Y PN + V D KL ++
Sbjct: 4109 RGEGSRFGAI------------KRAYIPNFESG--HNNLVQEVDLKLKYV-----MQPDG 4149
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYS 330
+ + R +YW D +I A +DG L+S L + A+A++ + G++
Sbjct: 4150 IAVDWVGRHIYWSDVKNK----RIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLGLM--- 4202
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKL 389
FWTDWG+ P+IE M+G NR+ ++ + WP GL++D + R+Y++D K
Sbjct: 4203 --------FWTDWGKEPKIESAWMNGENRNILVFEDLGWPTGLSIDYLNNDRIYWSDFKE 4254
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
D I+ YDGT R +VI + M ++ D+ D
Sbjct: 4255 DVIETIKYDGTDR-RVIAKEAMNPYSLDIFED 4285
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
+LF+TDW +I R DGS+ +I+T + WPNGL +D A R+Y+ D+ D I+
Sbjct: 839 YLFFTDWFRPAKIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRLYWVDAYFDRIEHST 898
Query: 397 YDGTGRQQVILIDLMVE 413
+DG GR+++ I+ M
Sbjct: 899 FDGLGRRRLGHIEQMTH 915
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 45/181 (24%)
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
G + T++++ I +G+ D TRR+Y++D ++
Sbjct: 2457 GIHTPTVVASGIGTADGIAFDWITRRIYYSD---------------------------YL 2489
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
++ I DGSN +++ A+ LD C +L+W DW
Sbjct: 2490 NQ-------TINSMAEDGSNRTVIARVPKPRAIVLD-----------PCQGYLYWADWDT 2531
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+ +IER + G+ R I+++ + P+GLTLD +Y+ D+ L I+ G R+ +
Sbjct: 2532 HAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRIERSTLTGMDREVI 2591
Query: 406 I 406
+
Sbjct: 2592 V 2592
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 50/238 (21%)
Query: 213 WGENP-RIERIGMDGSNRSTIISTKIYWPN-GLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DG+NR+ S + P+ L LD +R +Y + + +S+E+
Sbjct: 1794 WVENPGEIHRVKTDGTNRTVFASISMVGPSMNLALDWISRNLYSTNPRT-----QSIEVL 1848
Query: 271 TNVNYSTIFRKLYWIDEGGN-GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
T ++ +RK ++G GV IG + +D G LY+
Sbjct: 1849 T-LHGDIRYRKTLIANDGTALGVGFPIG--------------------ITVDPARGKLYW 1887
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
S TD G +I MDG++ T+ + + +TLDI +++Y+A +
Sbjct: 1888 SDQG-------TDSGVPAKIASANMDGTSVKTLFTGNLEHLECVTLDIEEQKLYWAVTGR 1940
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I+ N DGT R +IL+ + + + + LYY+ E E ++
Sbjct: 1941 GVIERGNVDGTDR--MILVHQLSH------------PWGIAVHDSFLYYTDEQYEVIE 1984
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 56/219 (25%)
Query: 131 LEEKGKDHRAQD-----IVVSGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
+E G+ HR + V + + +V LA DWI ++Y + R IEV +G
Sbjct: 1795 VENPGEIHRVKTDGTNRTVFASISMVGPSMNLALDWISRNLYSTNPRTQSIEVLTLHGDI 1854
Query: 183 R---IVLAKDN----ITQPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRST 231
R ++A D + P G+ +DP+ G L+W+D G + +I MDG++ T
Sbjct: 1855 RYRKTLIANDGTALGVGFPIGITVDPARGK--LYWSDQGTDSGVPAKIASANMDGTSVKT 1912
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+ + + +TLDI +++Y+A + G G
Sbjct: 1913 LFTGNLEHLECVTLDIEEQKLYWAVT-------------------------------GRG 1941
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
V I + N+DG++ ILV QL + + + LYY+
Sbjct: 1942 V---IERGNVDGTDRMILVH-QLSHPWGIAVHDSFLYYT 1976
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
IV S L + GL D+ +YW+D+ L RIE G +R V+ + G+ L
Sbjct: 2548 IVNSSLVMPSGLTLDYEEDLLYWVDASLQRIERSTLTGMDREVIVNAAV-HAFGLTL--- 2603
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
++++WTD + DGS + + + + P G+ + +R
Sbjct: 2604 -YGQYIYWTDLYTQRIYQANKYDGSGQIAMTTNLLSQPRGINTVVKNQR 2651
>gi|332210037|ref|XP_003254115.1| PREDICTED: low-density lipoprotein receptor-related protein 2
[Nomascus leucogenys]
Length = 4621
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/301 (40%), Positives = 165/301 (54%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCDG DCPNG DE P C+ C G C++ C P GA C CP G +L+ND
Sbjct: 1325 CVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHECVQEPFGAKCLCPLGFLLAND 1384
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++EC+ PG CSQ C N +GS+ CSC+ GY+LE D TCK + L++++++
Sbjct: 1385 SKTCEDIDECDIPGSCSQHCYNMRGSFRCSCDTGYMLESDGRTCKVTASESLLLLVASQN 1444
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+ + + G D R
Sbjct: 1445 KIIADSVTSQVHNIYSLVENGSYIVAVDFDSISGRIFWSDATQGKTWSAFQNGTDRRV-- 1502
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ S + L E +A DW+G ++YW D L IEV +G++R VL N+T PRG+ LDP
Sbjct: 1503 VFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKNLTNPRGLALDPR 1562
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
LFW+DWG +PRIER MDGS R+ I+ KI+WP GLT+D R +YF DS LD++
Sbjct: 1563 MNEHLLFWSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTVDYPNRLLYFMDSYLDYM 1622
Query: 263 D 263
D
Sbjct: 1623 D 1623
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/354 (33%), Positives = 179/354 (50%), Gaps = 71/354 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
RC+++ KVCDG DCP DE G C C C CH TP G C CPPG
Sbjct: 278 RCISIYKVCDGILDCPGREDENSTTTGKYCSTTLCSALN--CQYQCHETPYGGACFCPPG 335
Query: 59 EILS-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH-SAA 116
I++ NDS TC + ++C+ G C Q C + G ++C C EGY+LE + CKA N A
Sbjct: 336 YIINHNDSRTCVEFDDCQIWGICDQKCESRPGHHLCHCEEGYILERGQY-CKANNSFGEA 394
Query: 117 FLIISNRHSILVADLEEKGKDHR------------------------------------- 139
+I SN +L+ D+ G+ R
Sbjct: 395 SIIFSNGRDLLIGDIH--GRSFRILVESQNRGVAVGVAFHYHLQRVFWTDTVQNKVFSVD 452
Query: 140 -----AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
Q+++ ++ E LA DW+ IY +++++NRI++ + +G+ R+ L +N+ P
Sbjct: 453 INGLNIQEVLNVSVETPENLAVDWVNNKIYLVETKVNRIDMVNLDGSYRVTLITENLGHP 512
Query: 195 RGMMLDPSPGTRWLFWTDW----GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
RG+ +DP+ G +LF++DW GE P++ER MDGSNR ++ TK+ WP G+TLD ++
Sbjct: 513 RGIAVDPTVG--YLFFSDWESLSGE-PKLERAFMDGSNRKDLVKTKLGWPAGVTLDTISK 569
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
RVY+ DS+ D+I+ V Y I RK + GG+ +P G + +G
Sbjct: 570 RVYWVDSRFDYIE--------TVTYDGIQRKT--VVHGGSLIPHPFGISLFEGQ 613
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 181/410 (44%), Gaps = 96/410 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ + K+C+ DC + +DE GC + EC C + C T C+C PG L
Sbjct: 3086 RCIEMMKLCNHLDDCLDNSDEK-GCGINECHDPSISGCDHNCTDTLTSFYCSCRPGYKLM 3144
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P CSQ C N GSYIC C GY+ E D TC+ ++ +LI S
Sbjct: 3145 SDKRTCVDIDECTEMPFVCSQKCENVIGSYICKCAPGYLREPDGKTCRQNSNIEPYLIFS 3204
Query: 122 NRH--------------------SILVADLEEKGK------------------DHRAQDI 143
NR+ +++ D + K + +
Sbjct: 3205 NRYYLRNLTIDGYFYSLILEGLGNVVALDFDRVEKRLYWIDTQRQVIERMFLNKTNKETV 3264
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPR 195
+ L E LA DW+ +YWLD+RL+ + V D NG +R +LA+ + PR
Sbjct: 3265 INHRLPAAESLAVDWVSRKLYWLDARLDGLFVSDLNGGHRRMLAQHCVDANNTFCFDNPR 3324
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G+ L P G +++W DWG I R+GMDG+N+S IISTK+ WPNG+T+D +Y+A
Sbjct: 3325 GLALHPQYG--YIYWADWGHRAYIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWA 3382
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ L +I+ LE G + + G L
Sbjct: 3383 DAHLGYIEYSDLE----------------------------------GHHRHTVYDGALP 3408
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ + +Y WTDW + DGSNR T+++T
Sbjct: 3409 HPFAITIFEDTIY-----------WTDWNTRTVEKGNKYDGSNRQTLVNT 3447
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 143/320 (44%), Gaps = 63/320 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLA-ECKHKFGLCSNTCHPTPLGA-LCTCPPG-EI 60
CV VCD DC + +DE GC+ E +C C G +C+C G E
Sbjct: 3939 HCVPHDNVCDDADDCGDWSDE-LGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFET 3997
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN--HTCKAINHSAAFL 118
D +C D+NECEQ G C Q C NTKGSY C C +G+ D C A +S L
Sbjct: 3998 NVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAAEGNSPLLL 4057
Query: 119 IISN-----------RHSILVADLE----------------------------------- 132
+ N R S + D E
Sbjct: 4058 LPDNVRIRKYNLSSERFSEYLQDEEYIQAVDYDWDPEGIGLSVVYYTVRAEGSRFGAIKR 4117
Query: 133 ------EKGKDHRAQ--DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
E G+++ Q D+ + + +G+A DW+G HIYW D + RIEV +G R
Sbjct: 4118 AYIPNFESGRNNLVQEVDLKLKYVMQPDGIAVDWVGRHIYWSDVKNKRIEVAKLDGRYRK 4177
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L ++ QP + ++P G +FWTDWG+ P+IE M+G +R+ ++ + WP GL+
Sbjct: 4178 WLISTDLDQPAAIAVNPKLGL--MFWTDWGKEPKIESAWMNGEDRNILVFEDLGWPTGLS 4235
Query: 245 LD-IATRRVYFADSKLDFID 263
+D + R+Y++D K D I+
Sbjct: 4236 IDYLNNDRLYWSDFKEDVIE 4255
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 114/253 (45%), Gaps = 61/253 (24%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G+ L DN +C N +F+++S + HS
Sbjct: 2029 CQQICLPVPGGLFSCACATGFKLNPDNRSCSPYN---SFIVVSMLSAIRGFSLELSDHSE 2085
Query: 127 LVADLEEKGKDHRAQDIVVS-------------------------------------GLD 149
+ + +G++ D+ VS G +
Sbjct: 2086 TMVPVAGQGRNALHVDVDVSSGFIYWCDFSSSVASDNAIRRIKPDGSSLTNIVTHGIGEN 2145
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ G++Y+ ++ ++ IEV N T R VL K + PR +++DP R+
Sbjct: 2146 GVRGIAVDWVAGNLYFTNAFVSETLIEVLRINTTYRRVLLKVTVDMPRHIVVDPK--NRY 2203
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
LFW D+G+ P+IER +D +NR+ ++S I P GL +D + VY+ D LD I
Sbjct: 2204 LFWADYGQRPKIERSFLDCTNRTVLVSEGIVTPRGLAVDRSDGYVYWVDDSLDII----A 2259
Query: 268 EIKTNVNYSTIFR 280
I+ N S + R
Sbjct: 2260 RIRINGENSEVIR 2272
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ SG+ +G+A+DWI IY+ D I E+G+NR V+A+ + +PR ++LDP
Sbjct: 2460 VIASGIGTADGIAFDWITRRIYYSDYLNQTINSMAEDGSNRTVIAR--VPKPRAIVLDPC 2517
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W DW + +IER + G+ R I+++ + P+GLTLD +Y+ D+ L I
Sbjct: 2518 QG--YLYWADWDTHAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRI 2575
Query: 263 D 263
+
Sbjct: 2576 E 2576
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 129/303 (42%), Gaps = 64/303 (21%)
Query: 68 CQDMNE-CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
C+D N CEQ S N + C C G+ L+ D C A+ + FLI S++ +I
Sbjct: 663 CKDNNGGCEQVCVLSHRTDNDGLGFRCKCTFGFQLDTDERRCTAVQN---FLIFSSQVAI 719
Query: 127 ----LVADLEEK-------------GKDHRAQD-------------------------IV 144
+E G D AQD +
Sbjct: 720 RGIPFTLSTQEDVMVPVSGNPSFFVGIDFDAQDSSIFFSDMSKHMIFKQKIDGTGREILA 779
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSP 203
+ ++ VE LA+DWI ++YW DS I V + T R V+ + PR +++ P
Sbjct: 780 ANRVENVESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTVVQY--LNNPRSVVVHPFA 837
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +LF+TDW +I R DGS+ I++T + WPNGL +D A R+Y+ D+ D I+
Sbjct: 838 G--YLFFTDWFRPAKIMRAWSDGSHLLPIVNTTLGWPNGLAIDWAASRLYWVDAYFDKIE 895
Query: 264 CKS-----------LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+ +E T+ IF + + + G +++ KA DG +++ SG
Sbjct: 896 HSTFDGLDRRRLGHIEQMTHPFGLAIFGEYLFFTDWRLGAIIRVRKA--DGGEMTVIRSG 953
Query: 313 QLY 315
Y
Sbjct: 954 IAY 956
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 176/457 (38%), Gaps = 106/457 (23%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT-----CPP 57
+RC+ +VC+G DC +G DE C+ PTP CT C
Sbjct: 3894 NRCIYGHEVCNGVDDCGDGTDETE----EHCRK----------PTP--KPCTEYEYKCGN 3937
Query: 58 GEILSNDSVTCQDMNECEQ----------------PGYCSQMCTN-TKGSYICSCNEGYV 100
G + +D+V C D ++C C Q CT +G +ICSC G+
Sbjct: 3938 GHCVPHDNV-CDDADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFE 3996
Query: 101 LE-YDNHTCKAINHSAAFLIISNR-------HSILVADLEEKGKDHRAQDIVVSGLDLVE 152
+D +C IN F + + AD D + G +
Sbjct: 3997 TNVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAAEGNSPLL 4056
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
L D + Y L S + DE + A D P G+ G +++T
Sbjct: 4057 -LLPDNVRIRKYNLSSERFSEYLQDE----EYIQAVDYDWDPEGI------GLSVVYYTV 4105
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK-- 270
E R I + Y PN F + + + L++K
Sbjct: 4106 RAEGSRFGAI------------KRAYIPN------------FESGRNNLVQEVDLKLKYV 4141
Query: 271 ---TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENG 325
+ + R +YW D +I A +DG L+S L + A+A++ + G
Sbjct: 4142 MQPDGIAVDWVGRHIYWSDVKNK----RIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLG 4197
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYF 384
++ FWTDWG+ P+IE M+G +R+ ++ + WP GL++D + R+Y+
Sbjct: 4198 LM-----------FWTDWGKEPKIESAWMNGEDRNILVFEDLGWPTGLSIDYLNNDRLYW 4246
Query: 385 ADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+D K D I+ DGT R +VI + M ++ D+ D
Sbjct: 4247 SDFKEDVIETIKCDGTDR-RVIAKEAMNPYSLDIFED 4282
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 33/151 (21%)
Query: 296 IGKANMDGSNASILVSGQL--YEALALDLENGMLY-----YSTLKCTR------------ 336
I K +DG+ IL + ++ E+LA D + LY Y ++ R
Sbjct: 765 IFKQKIDGTGREILAANRVENVESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTVVQY 824
Query: 337 --------------WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+LF+TDW +I R DGS+ I++T + WPNGL +D A R+
Sbjct: 825 LNNPRSVVVHPFAGYLFFTDWFRPAKIMRAWSDGSHLLPIVNTTLGWPNGLAIDWAASRL 884
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
Y+ D+ D I+ +DG R+++ I+ M
Sbjct: 885 YWVDAYFDKIEHSTFDGLDRRRLGHIEQMTH 915
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 45/181 (24%)
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
G + T+I++ I +G+ D TRR+Y++D ++
Sbjct: 2454 GIHTPTVIASGIGTADGIAFDWITRRIYYSD---------------------------YL 2486
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
++ I DGSN +++ A+ LD C +L+W DW
Sbjct: 2487 NQ-------TINSMAEDGSNRTVIARVPKPRAIVLD-----------PCQGYLYWADWDT 2528
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+ +IER + G+ R I+++ + P+GLTLD +Y+ D+ L I+ G R+ +
Sbjct: 2529 HAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRIERSTRTGMDREVI 2588
Query: 406 I 406
+
Sbjct: 2589 V 2589
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 50/238 (21%)
Query: 213 WGENP-RIERIGMDGSNRSTIISTKIYWPN-GLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DG+NR+ S + P+ L LD +R +Y + + +S+E+
Sbjct: 1794 WVENPGEIHRVKTDGTNRTVFASISMVGPSMNLALDWISRNLYSTNPRT-----QSIEVL 1848
Query: 271 TNVNYSTIFRKLYWIDEGGN-GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
T ++ +RK ++G GV IG + +D G LY+
Sbjct: 1849 T-LHGDIRYRKTLIANDGTALGVGFPIG--------------------ITVDPSRGKLYW 1887
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
S TD G +I MDG++ T+ + + +TLDI +++Y+A +
Sbjct: 1888 SDQG-------TDSGVPAKIASANMDGTSVKTLFTGNLEHLECVTLDIEEQKLYWAVTGR 1940
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I+ N DGT R +IL+ + + + + LYY+ E E ++
Sbjct: 1941 GVIERGNVDGTDR--MILVHQLSH------------PWGIAVYDSFLYYTDEQYEVIE 1984
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 56/219 (25%)
Query: 131 LEEKGKDHRAQD-----IVVSGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
+E G+ HR + V + + +V LA DWI ++Y + R IEV +G
Sbjct: 1795 VENPGEIHRVKTDGTNRTVFASISMVGPSMNLALDWISRNLYSTNPRTQSIEVLTLHGDI 1854
Query: 183 R---IVLAKDN----ITQPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRST 231
R ++A D + P G+ +DPS G L+W+D G + +I MDG++ T
Sbjct: 1855 RYRKTLIANDGTALGVGFPIGITVDPSRGK--LYWSDQGTDSGVPAKIASANMDGTSVKT 1912
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+ + + +TLDI +++Y+A + G G
Sbjct: 1913 LFTGNLEHLECVTLDIEEQKLYWAVT-------------------------------GRG 1941
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
V I + N+DG++ ILV QL + + + LYY+
Sbjct: 1942 V---IERGNVDGTDRMILVH-QLSHPWGIAVYDSFLYYT 1976
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 130/316 (41%), Gaps = 48/316 (15%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNITQ-PRGMMLDPSPGTRWLFW 210
GL D+ +Y++DS L+ ++ CD NG + R V+A D I + P + L ++W
Sbjct: 1602 GLTVDYPNRLLYFMDSYLDYMDFCDYNGHHRRQVIASDLIIRHPYALTLFEDS----VYW 1657
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
TD + G N+S ++ I WP G+ + + + + + F C L +
Sbjct: 1658 TDRATRRVMRANKWHGGNQSVVM-YNIQWPLGI-VAVHPSKQPNSVNPCAFSRCSHLCLL 1715
Query: 271 TNVN---YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL----- 322
++ YS + +G L N + L++ + + + L
Sbjct: 1716 SSQGPHFYSCVC---------PSGWSLSPDLLNCLRDDQPFLITVRQHIIFGISLNPDVR 1766
Query: 323 -ENGMLYYSTLK---------CTRWLFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPN 371
+ M+ + ++ ++++W ENP I R+ DG+NR+ S + P+
Sbjct: 1767 SNDAMVPIAGIQNGLDVEFDDAEQYIYWV---ENPGEIHRVKTDGTNRTVFASISMVGPS 1823
Query: 372 -GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND--LMGDNGVPALA 428
L LD +R +Y + + I+ G R + LI ND +G +
Sbjct: 1824 MNLALDWISRNLYSTNPRTQSIEVLTLHGDIRYRKTLI------ANDGTALGVGFPIGIT 1877
Query: 429 LDLENGMLYYSTEGAE 444
+D G LY+S +G +
Sbjct: 1878 VDPSRGKLYWSDQGTD 1893
>gi|402888559|ref|XP_003907625.1| PREDICTED: low-density lipoprotein receptor-related protein 2 [Papio
anubis]
Length = 4620
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 121/301 (40%), Positives = 164/301 (54%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVN++ VCDG DCPNG DE P C+ C G C++ C P GA C CP G +L+ND
Sbjct: 1303 CVNMSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHECVQEPFGAKCLCPLGFLLAND 1362
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++EC+ PG CSQ C N +GS+ CSC+ GY+LE D TCK L++++++
Sbjct: 1363 SKTCEDVDECDIPGSCSQHCYNMRGSFRCSCDTGYMLESDGRTCKVTASENLLLLVASQN 1422
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+ + + G D R
Sbjct: 1423 KIIADSVTSQVHNIYSLVENGSYIVAVDFDSISGRIFWSDATQGKTWSAFQNGTDRRV-- 1480
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ S + L E +A DW+G ++YW D L IEV +G++R VL N+T PRG+ LDP
Sbjct: 1481 VFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKNLTNPRGLALDPR 1540
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
LFW+DWG +PRIER MDGS R+ I+ KI+WP GLT+D R +YF DS LD+I
Sbjct: 1541 MNEHLLFWSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYI 1600
Query: 263 D 263
D
Sbjct: 1601 D 1601
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/353 (32%), Positives = 175/353 (49%), Gaps = 69/353 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
RC+++ KVCDG DCP DE G C C C CH TP G C CPPG
Sbjct: 281 RCISIYKVCDGILDCPGREDENSTTTGKYCSTTLCSALN--CQYQCHETPYGGACFCPPG 338
Query: 59 -EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I NDS TC + ++C+ G C Q C + G ++C C EGY+LE H + A
Sbjct: 339 YTINHNDSRTCVEFDDCQIWGICDQKCESRPGHHLCHCEEGYILERGQHCKANDSFGEAS 398
Query: 118 LIISNRHSILVADLEEKGKDHR-------------------------------------- 139
+I SN +L+ D+ G+ R
Sbjct: 399 IIFSNGRDLLIGDIH--GRSFRILVESQNRGVAVGVAFHYHLQRVFWTDTVQNKVFSVDI 456
Query: 140 ----AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
Q+++ ++ E LA DW+ IY +++++NRI++ + +G+ R+ L +N+ PR
Sbjct: 457 HGLNIQEVLNVSVETPENLAVDWVNNKIYLVETKVNRIDMVNLDGSYRVTLITENLGHPR 516
Query: 196 GMMLDPSPGTRWLFWTDW----GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
G+ +DP+ G +LF++DW GE P++ER MDGSNR ++ TK+ WP G+TLD+ ++R
Sbjct: 517 GIAVDPTVG--YLFFSDWESLSGE-PKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKR 573
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
VY+ DS+ D+I+ V Y I RK + GG+ +P G + +G
Sbjct: 574 VYWVDSRFDYIE--------TVTYDGIQRKT--VVHGGSLIPHPFGISLFEGQ 616
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 180/410 (43%), Gaps = 96/410 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ + K+C+ DC + +DE GC + EC C + C T C+C PG L
Sbjct: 3064 RCIEMMKLCNHLDDCLDNSDEK-GCGVNECHDPSISGCDHNCTDTLTSFYCSCRPGYKLM 3122
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P CSQ C N GSYIC C GY+ E D TC+ ++ +LI S
Sbjct: 3123 SDKRTCVDIDECTETPFVCSQKCENVIGSYICKCAPGYLREPDGKTCRQNSNIEPYLIFS 3182
Query: 122 NRH--------------------SILVADLEEKGK------------------DHRAQDI 143
NR+ +++ D + K + I
Sbjct: 3183 NRYYLRNLTIDGYFYSLILEGLGNVVALDFDRVEKRLYWIDTQRQVIERMFLNKTNKETI 3242
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPR 195
+ L E LA +W+ +YWLD+RL+ + V D NG +R +LA+ + PR
Sbjct: 3243 INHRLPAAESLAVEWVSRKLYWLDARLDGLFVSDLNGGHRRMLAQHCVDANNTFCFDNPR 3302
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G+ L P G +++W DWG I R+GMDG+N+S IISTK+ WPNG+T+D +Y+A
Sbjct: 3303 GLALHPQYG--YIYWADWGHRAYIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWA 3360
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ L +I+ LE G + G L
Sbjct: 3361 DAHLGYIEYSDLE----------------------------------GHRRHTVYDGTLP 3386
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ + +Y WTDW + DGSNR T+++T
Sbjct: 3387 HPFAITIFEDTIY-----------WTDWNTRTVEKGNKYDGSNRQTLVNT 3425
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 142/320 (44%), Gaps = 63/320 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLA-ECKHKFGLCSNTCHPTPLGA-LCTCPPG-EI 60
C+ VCD DC + +DE GC+ E +C C G +C+C G E
Sbjct: 3904 HCIPNDNVCDDADDCGDWSDE-LGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFET 3962
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN--HTCKAINHSAAFL 118
D +C D+NECEQ G C Q C NTKGSY C C +G+ D+ C A S L
Sbjct: 3963 NVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDHPGKRCAAEGSSPLLL 4022
Query: 119 IISN-----------RHSILVADLE----------------------------------- 132
+ N R S + D E
Sbjct: 4023 LPDNVRIRKYNLSSERFSEYLQDEEYIQAVDYDWDPEDIGLSVVYYTVRGEGSRFGAIKR 4082
Query: 133 ------EKGKDHRAQ--DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
E G ++ Q D+ + + +G+A DW+G HIYW D + RIEV +G R
Sbjct: 4083 AYIPNFESGHNNLVQEVDLKLKYVMQPDGIAVDWVGRHIYWSDVKNKRIEVAKLDGRYRK 4142
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L ++ QP + ++P G +FWTDWG+ P+IE M+G +R+ ++ + WP GL+
Sbjct: 4143 WLISTDLDQPAAIAVNPKLGL--MFWTDWGKEPKIESAWMNGEDRNILVFKDLGWPTGLS 4200
Query: 245 LD-IATRRVYFADSKLDFID 263
+D + R+Y++D K D I+
Sbjct: 4201 IDYLNNDRIYWSDFKEDVIE 4220
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 59/267 (22%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G+ L DN +C N +F+++S + HS
Sbjct: 2007 CQQICLPVPGGLFSCACATGFKLNPDNRSCSPYN---SFIVVSMLSAIRGFSLELSDHSE 2063
Query: 127 LVADLEEKGKDHRAQDIVVS-------------------------------------GLD 149
+ + +G++ D+ VS G +
Sbjct: 2064 TMVPVAGQGRNALHVDVDVSSGFVYWCDFSSSVASDNAIRRIKPDGSSLMNIVTHGIGEN 2123
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ G++Y+ ++ ++ IEV N T R VL K + PR +++DP R+
Sbjct: 2124 GVRGIAVDWVAGNLYFTNAFVSETLIEVLRINTTYRRVLLKVTVDMPRHIVVDPK--NRY 2181
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
LFW D+G+ P+IER +D +NR+ ++S I P GL +D + VY+ D LD I +
Sbjct: 2182 LFWADYGQRPKIERSFLDCTNRTVLVSEGIVTPRGLAVDRSDGYVYWVDDSLDIIARIHI 2241
Query: 268 --EIKTNVNYSTIFRKLYWIDEGGNGV 292
E + Y + + Y I GN +
Sbjct: 2242 NGENSEVIRYGSRYPTPYGITVFGNSI 2268
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 75/125 (60%), Gaps = 4/125 (3%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ SG+ +G+A+DWI IY+ D I E+G+NR V+A+ + +PR ++LDP
Sbjct: 2438 VIASGIGTADGIAFDWITRRIYYSDYLNQTINSMAEDGSNRTVIAR--VPKPRAIVLDPC 2495
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W DW + +IER + G+ R I+++ + P+GLTLD +Y+ D+ L I
Sbjct: 2496 QG--YLYWADWDMHAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQKI 2553
Query: 263 DCKSL 267
+ +L
Sbjct: 2554 ERSTL 2558
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 177/452 (39%), Gaps = 96/452 (21%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT-----CPP 57
+RC+ +VC+G DC +G DE C+ PTP CT C
Sbjct: 3859 NRCIYGHEVCNGVDDCGDGTDETE----EHCRK----------PTP--KPCTEYEYKCGN 3902
Query: 58 GEILSNDSVTCQDMNECEQ----------------PGYCSQMCTN-TKGSYICSCNEGYV 100
G + ND+V C D ++C C Q CT +G +ICSC G+
Sbjct: 3903 GHCIPNDNV-CDDADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFE 3961
Query: 101 LE-YDNHTCKAINHSAAFLIISNR-------HSILVADLEEKGKDHRAQDIVVSGLDLVE 152
+D +C IN F + + AD DH + G +
Sbjct: 3962 TNVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDHPGKRCAAEGSSPLL 4021
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
L D + Y L S + DE + A D P + G +++T
Sbjct: 4022 -LLPDNVRIRKYNLSSERFSEYLQDE----EYIQAVDYDWDPEDI------GLSVVYYTV 4070
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN 272
GE R I + Y PN + V D KL ++
Sbjct: 4071 RGEGSRFGAI------------KRAYIPNFESG--HNNLVQEVDLKLKYV-----MQPDG 4111
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYS 330
+ + R +YW D +I A +DG L+S L + A+A++ + G++
Sbjct: 4112 IAVDWVGRHIYWSDVKNK----RIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLGLM--- 4164
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKL 389
FWTDWG+ P+IE M+G +R+ ++ + WP GL++D + R+Y++D K
Sbjct: 4165 --------FWTDWGKEPKIESAWMNGEDRNILVFKDLGWPTGLSIDYLNNDRIYWSDFKE 4216
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
D I+ YDGT R +VI + M ++ D+ D
Sbjct: 4217 DVIETIKYDGTDR-RVIAKEAMNPYSLDIFED 4247
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 94/202 (46%), Gaps = 23/202 (11%)
Query: 114 SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI 173
S F ++H I ++ G++ A + V + VE LA+DWI ++YW DS I
Sbjct: 756 STIFFSDMSKHMIFKQKIDGTGREILAANRVEN----VESLAFDWISKNLYWTDSHYKSI 811
Query: 174 EVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
V R + + + PR +++ P G +LF+TDW +I R DGS+ I+
Sbjct: 812 SVMRLADKMRRTVVQ-YLNNPRSVVVHPFAG--YLFFTDWFRPAKIMRAWSDGSHLLPIV 868
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
+T + WPNGL +D A +L I E T+ IF + + + G
Sbjct: 869 NTTLGWPNGLAIDWA---------RLGHI-----EQMTHPFGLAIFGEHLFFTDWRLGAV 914
Query: 294 LKIGKANMDGSNASILVSGQLY 315
+++ KA DG +++ SG Y
Sbjct: 915 IRVRKA--DGGEMTVIRSGIAY 934
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 122/333 (36%), Gaps = 92/333 (27%)
Query: 75 EQPGYCSQMCTNTKGSYICSCNEGY-VLEYDNHTCKAINHSAAFLIISNRHSILVADLEE 133
E G CS +C G Y C+ + LE D C AI+ + FLI + +S+ L+
Sbjct: 2326 ENNGGCSHLCFALPGLYTPKCDCAFGTLESDGKNC-AIS-TENFLIFALSNSLRSLHLDP 2383
Query: 134 KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
+ Q I V V L YD + IY+ + + + G V I
Sbjct: 2384 ENHSPPFQTINVE--RTVMSLDYDSVSDRIYFTQNLASGV------GQISYVSLSSGIHT 2435
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
P T+I++ I +G+ D TRR+Y
Sbjct: 2436 P------------------------------------TVIASGIGTADGIAFDWITRRIY 2459
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
++D ++++ I DGSN +++
Sbjct: 2460 YSD---------------------------YLNQ-------TINSMAEDGSNRTVIARVP 2485
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
A+ LD C +L+W DW + +IER + G+ R I+++ + P+GL
Sbjct: 2486 KPRAIVLD-----------PCQGYLYWADWDMHAKIERATLGGNFRVPIVNSSLVMPSGL 2534
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
TLD +Y+ D+ L I+ G R+ ++
Sbjct: 2535 TLDYEEDLLYWVDASLQKIERSTLTGMDREVIV 2567
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 50/238 (21%)
Query: 213 WGENP-RIERIGMDGSNRSTIISTKIYWPN-GLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DG+NR+ S + P+ L LD +R +Y + + +S+E+
Sbjct: 1772 WVENPGEIHRVKTDGTNRTVFASVSMVGPSMNLALDWVSRNLYSTNPRT-----QSIEVL 1826
Query: 271 TNVNYSTIFRKLYWIDEGGN-GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
T ++ +RK ++G GV IG + +D G LY+
Sbjct: 1827 T-LHGDIRYRKTLIANDGTALGVGFPIG--------------------ITVDPTRGKLYW 1865
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
S TD G +I MDG++ T+ + + +TLDI +++Y+A +
Sbjct: 1866 SDQG-------TDSGVPAKIASANMDGTSVKTLFTGNLEHLECVTLDIEEQKLYWAVTGR 1918
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I+ N DGT R +IL+ + + + + LYY+ E E ++
Sbjct: 1919 GVIERGNVDGTDR--MILVHQLSH------------PWGIAVYDSFLYYTDEQYEVIE 1962
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 131/317 (41%), Gaps = 50/317 (15%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNITQ-PRGMMLDPSPGTRWLFW 210
GL D+ +Y++DS L+ I+ CD NG + R V+A D I + P + L ++W
Sbjct: 1580 GLTIDYPNRLLYFMDSYLDYIDFCDYNGHHRRQVIASDLIIRHPYALTLFEDS----VYW 1635
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
TD + G N+S ++ I WP G+ + + + + + F C L +
Sbjct: 1636 TDRATRRVMRANKWHGGNQSVVM-YNIQWPLGI-VAVHPSKQPNSVNPCAFSRCSHLCLL 1693
Query: 271 TNVN---YSTIFRKLYWIDEG-----GNGVPLKIG-----------KANMDGSNASILVS 311
++ YS + + + + P I ++ ++A + ++
Sbjct: 1694 SSQGPHFYSCVCPSGWSLSPDLLNCLRDDQPFLITVRQHIIFGISLNPDVKSNDAMVPIA 1753
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTIISTKIYWP 370
G + L ++ ++ Y ++W ENP I R+ DG+NR+ S + P
Sbjct: 1754 G-IQNGLDVEFDDAEQY---------IYWV---ENPGEIHRVKTDGTNRTVFASVSMVGP 1800
Query: 371 N-GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND--LMGDNGVPAL 427
+ L LD +R +Y + + I+ G R + LI ND +G +
Sbjct: 1801 SMNLALDWVSRNLYSTNPRTQSIEVLTLHGDIRYRKTLI------ANDGTALGVGFPIGI 1854
Query: 428 ALDLENGMLYYSTEGAE 444
+D G LY+S +G +
Sbjct: 1855 TVDPTRGKLYWSDQGTD 1871
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 56/219 (25%)
Query: 131 LEEKGKDHRAQD-----IVVSGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
+E G+ HR + V + + +V LA DW+ ++Y + R IEV +G
Sbjct: 1773 VENPGEIHRVKTDGTNRTVFASVSMVGPSMNLALDWVSRNLYSTNPRTQSIEVLTLHGDI 1832
Query: 183 R---IVLAKDN----ITQPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRST 231
R ++A D + P G+ +DP+ G L+W+D G + +I MDG++ T
Sbjct: 1833 RYRKTLIANDGTALGVGFPIGITVDPTRGK--LYWSDQGTDSGVPAKIASANMDGTSVKT 1890
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+ + + +TLDI +++Y+A + G G
Sbjct: 1891 LFTGNLEHLECVTLDIEEQKLYWAVT-------------------------------GRG 1919
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
V I + N+DG++ ILV QL + + + LYY+
Sbjct: 1920 V---IERGNVDGTDRMILVH-QLSHPWGIAVYDSFLYYT 1954
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 33/116 (28%)
Query: 296 IGKANMDGSNASILVSGQL--YEALALDLENGMLY-----YSTLKCTR------------ 336
I K +DG+ IL + ++ E+LA D + LY Y ++ R
Sbjct: 768 IFKQKIDGTGREILAANRVENVESLAFDWISKNLYWTDSHYKSISVMRLADKMRRTVVQY 827
Query: 337 --------------WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 378
+LF+TDW +I R DGS+ I++T + WPNGL +D A
Sbjct: 828 LNNPRSVVVHPFAGYLFFTDWFRPAKIMRAWSDGSHLLPIVNTTLGWPNGLAIDWA 883
>gi|355564952|gb|EHH21441.1| hypothetical protein EGK_04507 [Macaca mulatta]
Length = 4655
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 121/301 (40%), Positives = 164/301 (54%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCDG DCPNG DE P C+ C G C++ C P GA C CP G +L+ND
Sbjct: 1325 CVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHECVQEPFGAKCLCPLGFLLAND 1384
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++EC+ PG CSQ C N +GS+ C+C+ GY+LE D TCK L++++++
Sbjct: 1385 SKTCEDIDECDIPGSCSQHCYNMRGSFRCACDTGYMLESDGRTCKVTASENLLLLVASQN 1444
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+ + + G D R
Sbjct: 1445 KIIADSVTSQVHNIYSLVENGSYIVAVDFDSISGRIFWSDATQGKTWSAFQNGTDRRV-- 1502
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ S + L E +A DW+G ++YW D L IEV +G++R VL N+T PRG+ LDP
Sbjct: 1503 VFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKNLTNPRGLALDPR 1562
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
LFW+DWG +PRIER MDGS R+ I+ KI+WP GLT+D R +YF DS LD+I
Sbjct: 1563 MNEHLLFWSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYI 1622
Query: 263 D 263
D
Sbjct: 1623 D 1623
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/353 (32%), Positives = 175/353 (49%), Gaps = 69/353 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
RC+++ KVCDG DCP DE G C C C CH TP G C CPPG
Sbjct: 278 RCISIYKVCDGILDCPGREDENSTTTGKYCSTTLCSALN--CQYQCHETPYGGACFCPPG 335
Query: 59 -EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I NDS TC + ++C+ G C Q C + G ++C C EGY+LE H + A
Sbjct: 336 YTINHNDSRTCVEFDDCQIWGICDQKCESRPGHHLCHCEEGYILERGQHCKANDSFGEAS 395
Query: 118 LIISNRHSILVADLEEKGKDHR-------------------------------------- 139
+I SN +L+ D+ G+ R
Sbjct: 396 IIFSNGRDLLIGDIH--GRSFRILVESQNRGVAVGVAFHYHLQRVFWTDTVQNKVFSVDI 453
Query: 140 ----AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
Q+++ ++ E LA DW+ IY +++++NRI++ + +G+ R+ L +N+ PR
Sbjct: 454 HGLNIQEVLNVSVETPENLAVDWVNNKIYLVETKVNRIDMVNLDGSYRVTLITENLGHPR 513
Query: 196 GMMLDPSPGTRWLFWTDW----GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
G+ +DP+ G +LF++DW GE P++ER MDGSNR ++ TK+ WP G+TLD+ ++R
Sbjct: 514 GIAVDPTVG--YLFFSDWESLSGE-PKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKR 570
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
VY+ DS+ D+I+ V Y I RK + GG+ +P G + +G
Sbjct: 571 VYWVDSRFDYIE--------TVTYDGIQRKT--VVHGGSLIPHPFGISLFEGQ 613
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 180/410 (43%), Gaps = 96/410 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ + K+C+ DC + +DE GC + EC C + C T C+C PG L
Sbjct: 3086 RCIEMMKLCNHLDDCLDNSDEK-GCGVNECHDPSISGCDHNCTDTLTSFYCSCRPGYKLM 3144
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P CSQ C N GSYIC C GY+ E D TC+ ++ +LI S
Sbjct: 3145 SDKRTCVDIDECTETPFVCSQKCENVIGSYICKCAPGYLREPDGKTCRQNSNIEPYLIFS 3204
Query: 122 NRH--------------------SILVADLEEKGK------------------DHRAQDI 143
NR+ +++ D + K + I
Sbjct: 3205 NRYYLRNLTIDGYFYSLILEGLSNVVALDFDRVEKRLYWIDTQRQVIERMFLNKTNKETI 3264
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPR 195
+ L E LA +W+ +YWLD+RL+ + V D NG +R +LA+ + PR
Sbjct: 3265 INHRLPAAESLAVEWVSRKLYWLDARLDGLFVSDLNGGHRRMLAQHCVDANNTFCFDNPR 3324
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G+ L P G +++W DWG I R+GMDG+N+S IISTK+ WPNG+T+D +Y+A
Sbjct: 3325 GLALHPQYG--YIYWADWGHRAYIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWA 3382
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ L +I+ LE G + G L
Sbjct: 3383 DAHLGYIEYSDLE----------------------------------GHRRHTVYDGSLP 3408
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ + +Y WTDW + DGSNR T+++T
Sbjct: 3409 HPFAITIFEDTIY-----------WTDWNTRTVEKGNKYDGSNRQTLVNT 3447
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 142/320 (44%), Gaps = 63/320 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLA-ECKHKFGLCSNTCHPTPLGA-LCTCPPG-EI 60
C+ VCD DC + +DE GC+ E +C C G +C+C G E
Sbjct: 3939 HCIPNDNVCDDADDCGDWSDE-LGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFET 3997
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN--HTCKAINHSAAFL 118
D +C D+NECEQ G C Q C NTKGSY C C +G+ D+ C A S L
Sbjct: 3998 NVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDHPGKRCAAEGSSPLLL 4057
Query: 119 IISN-----------RHSILVADLE----------------------------------- 132
+ N R S + D E
Sbjct: 4058 LPDNVRIRKYNLSSERFSEYLQDEEYIQAVDYDWDPEDIGLSVVYYTVRGEGSRFGAIKR 4117
Query: 133 ------EKGKDHRAQ--DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
E G ++ Q D+ + + +G+A DW+G HIYW D + RIEV +G R
Sbjct: 4118 AYIPNFESGHNNLVQEVDLKLKYVMQPDGIAVDWVGRHIYWSDVKNKRIEVAKLDGRYRK 4177
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L ++ QP + ++P G +FWTDWG+ P+IE M+G +R+ ++ + WP GL+
Sbjct: 4178 WLISTDLDQPAAIAVNPKLGL--MFWTDWGKEPKIESAWMNGEDRNILVFEDLGWPTGLS 4235
Query: 245 LD-IATRRVYFADSKLDFID 263
+D + R+Y++D K D I+
Sbjct: 4236 IDYLNNDRIYWSDFKEDVIE 4255
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 114/253 (45%), Gaps = 61/253 (24%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G+ L DN +C N +F+++S + HS
Sbjct: 2029 CQQICLPVPGGLFSCACATGFKLNPDNRSCSPYN---SFIVVSMLSAIRGFSLELSDHSE 2085
Query: 127 LVADLEEKGKDHRAQDIVVS-------------------------------------GLD 149
+ + +G++ D+ VS G +
Sbjct: 2086 TMVPVAGQGRNALHVDVDVSSGFVYWCDFSSSVTSDNAIRRIKPDGSSLMNIVTHGIGEN 2145
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ G++Y+ ++ ++ IEV N T R VL K + PR +++DP R+
Sbjct: 2146 GVRGIAVDWVAGNLYFTNAFVSETLIEVLRINTTYRRVLLKVTVDMPRHIVVDPK--NRY 2203
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
LFW D+G+ P+IER +D +NR+ ++S I P GL +D + VY+ D LD I
Sbjct: 2204 LFWADYGQRPKIERSFLDCTNRTVLVSEGIVTPRGLAVDRSDGYVYWVDDSLDII----A 2259
Query: 268 EIKTNVNYSTIFR 280
I+ N S + R
Sbjct: 2260 RIRINGENSEVIR 2272
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 76/129 (58%), Gaps = 4/129 (3%)
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
R ++ SG+ +G+A+DWI IY+ D I E+G+NR V+A+ + +PR ++
Sbjct: 2456 RTPTVIASGIGTADGIAFDWITRRIYYSDYLNQTINSMAEDGSNRTVIAR--VPKPRAIV 2513
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
LDP G +L+W DW + +IER + G+ R I+++ + P+GLTLD +Y+ D+
Sbjct: 2514 LDPCQG--YLYWADWDMHAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDAS 2571
Query: 259 LDFIDCKSL 267
L I+ +L
Sbjct: 2572 LQKIERSTL 2580
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 64/303 (21%)
Query: 68 CQDMNE-CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
C+D N CEQ S N + C C G+ L+ D C A+ + FLI S++ +I
Sbjct: 663 CKDNNGGCEQVCVLSHRTDNDGLGFRCKCTFGFQLDTDERHCIAVQN---FLIFSSQVAI 719
Query: 127 ----LVADLEEK-------------GKDHRAQDIVVSGLDL------------------- 150
+E G D AQD + D+
Sbjct: 720 RGIPFTLSTQEDVMVPVSGNPSFFVGIDFDAQDSTIFFSDMSKHMIFKQKIDGTGREILA 779
Query: 151 ------VEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSP 203
VE LA+DWI ++YW DS I V + T R V+ + PR +++ P
Sbjct: 780 ANRVENVESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTVVQY--LNNPRSVVVHPFA 837
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +LF+TDW +I R DGS+ I++T + WPNGL +D A R+Y+ D+ D I+
Sbjct: 838 G--YLFFTDWFRPAKIMRAWSDGSHLLPIVNTTLGWPNGLAIDWAASRLYWVDAYFDKIE 895
Query: 264 CKS-----------LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+ +E T+ IF + + + G +++ KA DG +++ SG
Sbjct: 896 HSTFDGLDRRRLGHIEQMTHPFGLAIFGEHLFFTDWRLGAIIRVRKA--DGGEMTVIRSG 953
Query: 313 QLY 315
Y
Sbjct: 954 IAY 956
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 177/452 (39%), Gaps = 96/452 (21%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT-----CPP 57
+RC+ +VC+G DC +G DE C+ PTP CT C
Sbjct: 3894 NRCIYGHEVCNGVDDCGDGTDETE----EHCRK----------PTP--KPCTEYEYKCGN 3937
Query: 58 GEILSNDSVTCQDMNECEQ----------------PGYCSQMCTN-TKGSYICSCNEGYV 100
G + ND+V C D ++C C Q CT +G +ICSC G+
Sbjct: 3938 GHCIPNDNV-CDDADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFE 3996
Query: 101 LE-YDNHTCKAINHSAAFLIISNR-------HSILVADLEEKGKDHRAQDIVVSGLDLVE 152
+D +C IN F + + AD DH + G +
Sbjct: 3997 TNVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDHPGKRCAAEGSSPLL 4056
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
L D + Y L S + DE + A D P + G +++T
Sbjct: 4057 -LLPDNVRIRKYNLSSERFSEYLQDE----EYIQAVDYDWDPEDI------GLSVVYYTV 4105
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN 272
GE R I + Y PN + V D KL ++
Sbjct: 4106 RGEGSRFGAI------------KRAYIPNFESG--HNNLVQEVDLKLKYV-----MQPDG 4146
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYS 330
+ + R +YW D +I A +DG L+S L + A+A++ + G++
Sbjct: 4147 IAVDWVGRHIYWSDVKNK----RIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLGLM--- 4199
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKL 389
FWTDWG+ P+IE M+G +R+ ++ + WP GL++D + R+Y++D K
Sbjct: 4200 --------FWTDWGKEPKIESAWMNGEDRNILVFEDLGWPTGLSIDYLNNDRIYWSDFKE 4251
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
D I+ YDGT R +VI + M ++ D+ D
Sbjct: 4252 DVIETIKYDGTDR-RVIAKEAMNPYSLDIFED 4282
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 33/151 (21%)
Query: 296 IGKANMDGSNASILVSGQL--YEALALDLENGMLY-----YSTLKCTR------------ 336
I K +DG+ IL + ++ E+LA D + LY Y ++ R
Sbjct: 765 IFKQKIDGTGREILAANRVENVESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTVVQY 824
Query: 337 --------------WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+LF+TDW +I R DGS+ I++T + WPNGL +D A R+
Sbjct: 825 LNNPRSVVVHPFAGYLFFTDWFRPAKIMRAWSDGSHLLPIVNTTLGWPNGLAIDWAASRL 884
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
Y+ D+ D I+ +DG R+++ I+ M
Sbjct: 885 YWVDAYFDKIEHSTFDGLDRRRLGHIEQMTH 915
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 122/333 (36%), Gaps = 92/333 (27%)
Query: 75 EQPGYCSQMCTNTKGSYICSCNEGY-VLEYDNHTCKAINHSAAFLIISNRHSILVADLEE 133
E G CS +C G Y C+ + LE D C AI+ + FLI + +S+ L+
Sbjct: 2348 ENNGGCSHLCFALPGLYTPKCDCAFGTLESDGKNC-AIS-TENFLIFALSNSLRSLHLDP 2405
Query: 134 KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
+ Q I V V L YD + IY+ + + + G V I
Sbjct: 2406 ENHSPPFQTINVE--RTVMSLDYDSVSDRIYFTQNLASGV------GQISYVSLSSGIRT 2457
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
P T+I++ I +G+ D TRR+Y
Sbjct: 2458 P------------------------------------TVIASGIGTADGIAFDWITRRIY 2481
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
++D ++++ I DGSN +++
Sbjct: 2482 YSD---------------------------YLNQ-------TINSMAEDGSNRTVIARVP 2507
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
A+ LD C +L+W DW + +IER + G+ R I+++ + P+GL
Sbjct: 2508 KPRAIVLD-----------PCQGYLYWADWDMHAKIERATLGGNFRVPIVNSSLVMPSGL 2556
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
TLD +Y+ D+ L I+ G R+ ++
Sbjct: 2557 TLDYEEDLLYWVDASLQKIERSTLTGMDREVIV 2589
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 50/238 (21%)
Query: 213 WGENP-RIERIGMDGSNRSTIISTKIYWPN-GLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DG+NR+ S + P+ L LD +R +Y + + +S+E+
Sbjct: 1794 WVENPGEIHRVKTDGTNRTVFASVSMVGPSMNLALDWVSRNLYSTNPRT-----QSIEVL 1848
Query: 271 TNVNYSTIFRKLYWIDEGGN-GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
T ++ +RK ++G GV IG + +D G LY+
Sbjct: 1849 T-LHGDIRYRKTLIANDGTALGVGFPIG--------------------ITVDPTRGKLYW 1887
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
S TD G +I MDG++ T+ + + +TLDI +++Y+A +
Sbjct: 1888 SDQG-------TDSGVPAKIASANMDGTSVKTLFTGNLEHLECVTLDIEEQKLYWAVTGR 1940
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I+ N DGT R +IL+ + + + + LYY+ E E ++
Sbjct: 1941 GVIERGNVDGTDR--MILVHQLSH------------PWGIAVYDSFLYYTDEQYEVIE 1984
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 131/317 (41%), Gaps = 50/317 (15%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNITQ-PRGMMLDPSPGTRWLFW 210
GL D+ +Y++DS L+ I+ CD NG + R V+A D I + P + L ++W
Sbjct: 1602 GLTIDYPNRLLYFMDSYLDYIDFCDYNGHHRRQVIASDLIIRHPYALTLFEDS----VYW 1657
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
TD + G N+S ++ I WP G+ + + + + + F C L +
Sbjct: 1658 TDRATRRVMRANKWHGGNQSVVM-YNIQWPLGI-VAVHPSKQPNSVNPCAFSRCSHLCLL 1715
Query: 271 TNVN---YSTIFRKLYWIDEG-----GNGVPLKIG-----------KANMDGSNASILVS 311
++ YS + + + + P I ++ ++A + ++
Sbjct: 1716 SSQGPHFYSCVCPSGWSLSPDLLNCLRDDQPFLITVRQHIIFGISLNPDVKSNDAMVPIA 1775
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTIISTKIYWP 370
G + L ++ ++ Y ++W ENP I R+ DG+NR+ S + P
Sbjct: 1776 G-IQNGLDVEFDDAEQY---------IYWV---ENPGEIHRVKTDGTNRTVFASVSMVGP 1822
Query: 371 N-GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND--LMGDNGVPAL 427
+ L LD +R +Y + + I+ G R + LI ND +G +
Sbjct: 1823 SMNLALDWVSRNLYSTNPRTQSIEVLTLHGDIRYRKTLI------ANDGTALGVGFPIGI 1876
Query: 428 ALDLENGMLYYSTEGAE 444
+D G LY+S +G +
Sbjct: 1877 TVDPTRGKLYWSDQGTD 1893
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 56/219 (25%)
Query: 131 LEEKGKDHRAQD-----IVVSGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
+E G+ HR + V + + +V LA DW+ ++Y + R IEV +G
Sbjct: 1795 VENPGEIHRVKTDGTNRTVFASVSMVGPSMNLALDWVSRNLYSTNPRTQSIEVLTLHGDI 1854
Query: 183 R---IVLAKDN----ITQPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRST 231
R ++A D + P G+ +DP+ G L+W+D G + +I MDG++ T
Sbjct: 1855 RYRKTLIANDGTALGVGFPIGITVDPTRGK--LYWSDQGTDSGVPAKIASANMDGTSVKT 1912
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+ + + +TLDI +++Y+A + G G
Sbjct: 1913 LFTGNLEHLECVTLDIEEQKLYWAVT-------------------------------GRG 1941
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
V I + N+DG++ ILV QL + + + LYY+
Sbjct: 1942 V---IERGNVDGTDRMILVH-QLSHPWGIAVYDSFLYYT 1976
>gi|297264242|ref|XP_001104179.2| PREDICTED: low-density lipoprotein receptor-related protein 2 isoform
2 [Macaca mulatta]
Length = 4639
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 121/301 (40%), Positives = 164/301 (54%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCDG DCPNG DE P C+ C G C++ C P GA C CP G +L+ND
Sbjct: 1325 CVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHECVQEPFGAKCLCPLGFLLAND 1384
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++EC+ PG CSQ C N +GS+ C+C+ GY+LE D TCK L++++++
Sbjct: 1385 SKTCEDIDECDIPGSCSQHCYNMRGSFRCACDTGYMLESDGRTCKVTASENLLLLVASQN 1444
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+ + + G D R
Sbjct: 1445 KIIADSVTSQVHNIYSLVENGSYIVAVDFDSISGRIFWSDATQGKTWSAFQNGTDRRV-- 1502
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ S + L E +A DW+G ++YW D L IEV +G++R VL N+T PRG+ LDP
Sbjct: 1503 VFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKNLTNPRGLALDPR 1562
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
LFW+DWG +PRIER MDGS R+ I+ KI+WP GLT+D R +YF DS LD+I
Sbjct: 1563 MNEHLLFWSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYI 1622
Query: 263 D 263
D
Sbjct: 1623 D 1623
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/353 (32%), Positives = 175/353 (49%), Gaps = 69/353 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
RC+++ KVCDG DCP DE G C C C CH TP G C CPPG
Sbjct: 278 RCISIYKVCDGILDCPGREDENSTTTGKYCSTTLCSALN--CQYQCHETPYGGACFCPPG 335
Query: 59 -EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I NDS TC + ++C+ G C Q C + G ++C C EGY+LE H + A
Sbjct: 336 YTINHNDSRTCVEFDDCQIWGICDQKCESRPGHHLCHCEEGYILERGQHCKANDSFGEAS 395
Query: 118 LIISNRHSILVADLEEKGKDHR-------------------------------------- 139
+I SN +L+ D+ G+ R
Sbjct: 396 IIFSNGRDLLIGDIH--GRSFRILVESQNRGVAVGVAFHYHLQRVFWTDTVQNKVFSVDI 453
Query: 140 ----AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
Q+++ ++ E LA DW+ IY +++++NRI++ + +G+ R+ L +N+ PR
Sbjct: 454 HGLNIQEVLNVSVETPENLAVDWVNNKIYLVETKVNRIDMVNLDGSYRVTLITENLGHPR 513
Query: 196 GMMLDPSPGTRWLFWTDW----GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
G+ +DP+ G +LF++DW GE P++ER MDGSNR ++ TK+ WP G+TLD+ ++R
Sbjct: 514 GIAVDPTVG--YLFFSDWESLSGE-PKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKR 570
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
VY+ DS+ D+I+ V Y I RK + GG+ +P G + +G
Sbjct: 571 VYWVDSRFDYIE--------TVTYDGIQRKT--VVHGGSLIPHPFGISLFEGQ 613
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 180/410 (43%), Gaps = 96/410 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ + K+C+ DC + +DE GC + EC C + C T C+C PG L
Sbjct: 3070 RCIEMMKLCNHLDDCLDNSDEK-GCGVNECHDPSISGCDHNCTDTLTSFYCSCRPGYKLM 3128
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P CSQ C N GSYIC C GY+ E D TC+ ++ +LI S
Sbjct: 3129 SDKRTCVDIDECTETPFVCSQKCENVIGSYICKCAPGYLREPDGKTCRQNSNIEPYLIFS 3188
Query: 122 NRH--------------------SILVADLEEKGK------------------DHRAQDI 143
NR+ +++ D + K + I
Sbjct: 3189 NRYYLRNLTIDGYFYSLILEGLGNVVALDFDRVEKRLYWIDTQRQVIERMFLNKTNKETI 3248
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPR 195
+ L E LA +W+ +YWLD+RL+ + V D NG +R +LA+ + PR
Sbjct: 3249 INHRLPAAESLAVEWVSRKLYWLDARLDGLFVSDLNGGHRRMLAQHCVDANNTFCFDNPR 3308
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G+ L P G +++W DWG I R+GMDG+N+S IISTK+ WPNG+T+D +Y+A
Sbjct: 3309 GLALHPQYG--YIYWADWGHRAYIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWA 3366
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ L +I+ LE G + G L
Sbjct: 3367 DAHLGYIEYSDLE----------------------------------GHRRHTVYDGSLP 3392
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ + +Y WTDW + DGSNR T+++T
Sbjct: 3393 HPFAITIFEDTIY-----------WTDWNTRTVEKGNKYDGSNRQTLVNT 3431
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 142/320 (44%), Gaps = 63/320 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLA-ECKHKFGLCSNTCHPTPLGA-LCTCPPG-EI 60
C+ VCD DC + +DE GC+ E +C C G +C+C G E
Sbjct: 3923 HCIPNDNVCDDADDCGDWSDE-LGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFET 3981
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN--HTCKAINHSAAFL 118
D +C D+NECEQ G C Q C NTKGSY C C +G+ D+ C A S L
Sbjct: 3982 NVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDHPGKRCAAEGSSPLLL 4041
Query: 119 IISN-----------RHSILVADLE----------------------------------- 132
+ N R S + D E
Sbjct: 4042 LPDNVRIRKYNLSSERFSEYLQDEEYIQAVDYDWDPEDIGLSVVYYTVRGEGSRFGAIKR 4101
Query: 133 ------EKGKDHRAQ--DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
E G ++ Q D+ + + +G+A DW+G HIYW D + RIEV +G R
Sbjct: 4102 AYIPNFESGHNNLVQEVDLKLKYVMQPDGIAVDWVGRHIYWSDVKNKRIEVAKLDGRYRK 4161
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L ++ QP + ++P G +FWTDWG+ P+IE M+G +R+ ++ + WP GL+
Sbjct: 4162 WLISTDLDQPAAIAVNPKLGL--MFWTDWGKEPKIESAWMNGEDRNILVFEDLGWPTGLS 4219
Query: 245 LD-IATRRVYFADSKLDFID 263
+D + R+Y++D K D I+
Sbjct: 4220 IDYLNNDRIYWSDFKEDVIE 4239
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 59/267 (22%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G+ L DN +C N +F+++S + HS
Sbjct: 2013 CQQICLPVPGGLFSCACATGFKLNPDNRSCSPYN---SFIVVSMLSAIRGFSLELSDHSE 2069
Query: 127 LVADLEEKGKDHRAQDIVVS-------------------------------------GLD 149
+ + +G++ D+ VS G +
Sbjct: 2070 TMVPVAGQGRNALHVDVDVSSGFVYWCDFSSSVTSDNAIRRIKPDGSSLMNIVTHGIGEN 2129
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ G++Y+ ++ ++ IEV N T R VL K + PR +++DP R+
Sbjct: 2130 GVRGIAVDWVAGNLYFTNAFVSETLIEVLRINTTYRRVLLKVTVDMPRHIVVDPK--NRY 2187
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID--CK 265
LFW D+G+ P+IER +D +NR+ ++S I P GL +D + VY+ D LD I C
Sbjct: 2188 LFWADYGQRPKIERSFLDCTNRTVLVSEGIVTPRGLAVDRSDGYVYWVDDSLDIIARICI 2247
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGV 292
+ E + Y + + Y I GN +
Sbjct: 2248 NGENSEVIRYGSRYPTPYGITVFGNSI 2274
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 75/125 (60%), Gaps = 4/125 (3%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ SG+ +G+A+DWI IY+ D I E+G+NR V+A+ + +PR ++LDP
Sbjct: 2444 VIASGIGTADGIAFDWITRRIYYSDYLNQTINSMAEDGSNRTVIAR--VPKPRAIVLDPC 2501
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W DW + +IER + G+ R I+++ + P+GLTLD +Y+ D+ L I
Sbjct: 2502 QG--YLYWADWDMHAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQKI 2559
Query: 263 DCKSL 267
+ +L
Sbjct: 2560 ERSTL 2564
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 64/303 (21%)
Query: 68 CQDMNE-CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
C+D N CEQ S N + C C G+ L+ D C A+ + FLI S++ +I
Sbjct: 663 CKDNNGGCEQVCVLSHRTDNDGLGFRCKCTFGFQLDTDERHCIAVQN---FLIFSSQVAI 719
Query: 127 ----LVADLEEK-------------GKDHRAQDIVVSGLDL------------------- 150
+E G D AQD + D+
Sbjct: 720 RGIPFTLSTQEDVMVPVSGNPSFFVGIDFDAQDSTIFFSDMSKHMIFKQKIDGTGREILA 779
Query: 151 ------VEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSP 203
VE LA+DWI ++YW DS I V + T R V+ + PR +++ P
Sbjct: 780 ANRVENVESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTVVQY--LNNPRSVVVHPFA 837
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +LF+TDW +I R DGS+ I++T + WPNGL +D A R+Y+ D+ D I+
Sbjct: 838 G--YLFFTDWFRPAKIMRAWSDGSHLLPIVNTTLGWPNGLAIDWAASRLYWVDAYFDKIE 895
Query: 264 CKS-----------LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+ +E T+ IF + + + G +++ KA DG +++ SG
Sbjct: 896 HSTFDGLDRRRLGHIEQMTHPFGLAIFGEHLFFTDWRLGAIIRVRKA--DGGEMTVIRSG 953
Query: 313 QLY 315
Y
Sbjct: 954 IAY 956
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 177/452 (39%), Gaps = 96/452 (21%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT-----CPP 57
+RC+ +VC+G DC +G DE C+ PTP CT C
Sbjct: 3878 NRCIYGHEVCNGVDDCGDGTDETE----EHCRK----------PTP--KPCTEYEYKCGN 3921
Query: 58 GEILSNDSVTCQDMNECEQ----------------PGYCSQMCTN-TKGSYICSCNEGYV 100
G + ND+V C D ++C C Q CT +G +ICSC G+
Sbjct: 3922 GHCIPNDNV-CDDADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFE 3980
Query: 101 LE-YDNHTCKAINHSAAFLIISNR-------HSILVADLEEKGKDHRAQDIVVSGLDLVE 152
+D +C IN F + + AD DH + G +
Sbjct: 3981 TNVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDHPGKRCAAEGSSPLL 4040
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
L D + Y L S + DE + A D P + G +++T
Sbjct: 4041 -LLPDNVRIRKYNLSSERFSEYLQDE----EYIQAVDYDWDPEDI------GLSVVYYTV 4089
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN 272
GE R I + Y PN + V D KL ++
Sbjct: 4090 RGEGSRFGAI------------KRAYIPNFESG--HNNLVQEVDLKLKYV-----MQPDG 4130
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYS 330
+ + R +YW D +I A +DG L+S L + A+A++ + G++
Sbjct: 4131 IAVDWVGRHIYWSDVKNK----RIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLGLM--- 4183
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKL 389
FWTDWG+ P+IE M+G +R+ ++ + WP GL++D + R+Y++D K
Sbjct: 4184 --------FWTDWGKEPKIESAWMNGEDRNILVFEDLGWPTGLSIDYLNNDRIYWSDFKE 4235
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
D I+ YDGT R +VI + M ++ D+ D
Sbjct: 4236 DVIETIKYDGTDR-RVIAKEAMNPYSLDIFED 4266
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 33/151 (21%)
Query: 296 IGKANMDGSNASILVSGQL--YEALALDLENGMLY-----YSTLKCTR------------ 336
I K +DG+ IL + ++ E+LA D + LY Y ++ R
Sbjct: 765 IFKQKIDGTGREILAANRVENVESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTVVQY 824
Query: 337 --------------WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+LF+TDW +I R DGS+ I++T + WPNGL +D A R+
Sbjct: 825 LNNPRSVVVHPFAGYLFFTDWFRPAKIMRAWSDGSHLLPIVNTTLGWPNGLAIDWAASRL 884
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
Y+ D+ D I+ +DG R+++ I+ M
Sbjct: 885 YWVDAYFDKIEHSTFDGLDRRRLGHIEQMTH 915
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 122/333 (36%), Gaps = 92/333 (27%)
Query: 75 EQPGYCSQMCTNTKGSYICSCNEGY-VLEYDNHTCKAINHSAAFLIISNRHSILVADLEE 133
E G CS +C G Y C+ + LE D C AI+ + FLI + +S+ L+
Sbjct: 2332 ENNGGCSHLCFALPGLYTPKCDCAFGTLESDGKNC-AIS-TENFLIFALSNSLRSLHLDP 2389
Query: 134 KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
+ Q I V V L YD + IY+ + + + G V I
Sbjct: 2390 ENHSPPFQTINVE--RTVMSLDYDSVSDRIYFTQNLASGV------GQISYVSLSSGIHT 2441
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
P T+I++ I +G+ D TRR+Y
Sbjct: 2442 P------------------------------------TVIASGIGTADGIAFDWITRRIY 2465
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
++D ++++ I DGSN +++
Sbjct: 2466 YSD---------------------------YLNQ-------TINSMAEDGSNRTVIARVP 2491
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
A+ LD C +L+W DW + +IER + G+ R I+++ + P+GL
Sbjct: 2492 KPRAIVLD-----------PCQGYLYWADWDMHAKIERATLGGNFRVPIVNSSLVMPSGL 2540
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
TLD +Y+ D+ L I+ G R+ ++
Sbjct: 2541 TLDYEEDLLYWVDASLQKIERSTLTGMDREVIV 2573
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 50/238 (21%)
Query: 213 WGENP-RIERIGMDGSNRSTIISTKIYWPN-GLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DG+NR+ S + P+ L LD +R +Y + + +S+E+
Sbjct: 1778 WVENPGEIHRVKTDGTNRTVFASVSMVGPSMNLALDWVSRNLYSTNPRT-----QSIEVL 1832
Query: 271 TNVNYSTIFRKLYWIDEGGN-GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
T ++ +RK ++G GV IG + +D G LY+
Sbjct: 1833 T-LHGDIRYRKTLIANDGTALGVGFPIG--------------------ITVDPTRGKLYW 1871
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
S TD G +I MDG++ T+ + + +TLDI +++Y+A +
Sbjct: 1872 SDQG-------TDSGVPAKIASANMDGTSVKTLFTGNLEHLECVTLDIEEQKLYWAVTGR 1924
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I+ N DGT R +IL+ + + + + LYY+ E E ++
Sbjct: 1925 GVIERGNVDGTDR--MILVHQLSH------------PWGIAVYDSFLYYTDEQYEVIE 1968
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 125/307 (40%), Gaps = 46/307 (14%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNITQ-PRGMMLDPSPGTRWLFW 210
GL D+ +Y++DS L+ I+ CD NG + R V+A D I + P + L ++W
Sbjct: 1602 GLTIDYPNRLLYFMDSYLDYIDFCDYNGHHRRQVIASDLIIRHPYALTLFEDS----VYW 1657
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID-CKSLEI 269
TD + G N+S ++ I WP G+ V SK + C+S+ +
Sbjct: 1658 TDRATRRVMRANKWHGGNQSVVM-YNIQWPLGI--------VAVHPSKQPNCECCESMCL 1708
Query: 270 KTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG--------SNASILVSGQLYEALALD 321
++ L + + + + G SN +++ + L ++
Sbjct: 1709 XXXXXXXSLSPDLLNCLRDDQPFLITVRQHIIFGISLNPDVKSNDAMVPIAGIQNGLDVE 1768
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPN-GLTLDIAT 379
+N Y ++W ENP I R+ DG+NR+ S + P+ L LD +
Sbjct: 1769 FDNAEQY---------IYWV---ENPGEIHRVKTDGTNRTVFASVSMVGPSMNLALDWVS 1816
Query: 380 RRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND--LMGDNGVPALALDLENGMLY 437
R +Y + + I+ G R + LI ND +G + +D G LY
Sbjct: 1817 RNLYSTNPRTQSIEVLTLHGDIRYRKTLI------ANDGTALGVGFPIGITVDPTRGKLY 1870
Query: 438 YSTEGAE 444
+S +G +
Sbjct: 1871 WSDQGTD 1877
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 56/219 (25%)
Query: 131 LEEKGKDHRAQD-----IVVSGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
+E G+ HR + V + + +V LA DW+ ++Y + R IEV +G
Sbjct: 1779 VENPGEIHRVKTDGTNRTVFASVSMVGPSMNLALDWVSRNLYSTNPRTQSIEVLTLHGDI 1838
Query: 183 R---IVLAKDN----ITQPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRST 231
R ++A D + P G+ +DP+ G L+W+D G + +I MDG++ T
Sbjct: 1839 RYRKTLIANDGTALGVGFPIGITVDPTRGK--LYWSDQGTDSGVPAKIASANMDGTSVKT 1896
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+ + + +TLDI +++Y+A + G G
Sbjct: 1897 LFTGNLEHLECVTLDIEEQKLYWAVT-------------------------------GRG 1925
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
V I + N+DG++ ILV QL + + + LYY+
Sbjct: 1926 V---IERGNVDGTDRMILVH-QLSHPWGIAVYDSFLYYT 1960
>gi|410968986|ref|XP_003990980.1| PREDICTED: low-density lipoprotein receptor-related protein 2 [Felis
catus]
Length = 4622
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/301 (38%), Positives = 166/301 (55%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCDG +DCPNG DE P C+ C G C++ C P GA C C G +L+ND
Sbjct: 1299 CVNLSAVCDGISDCPNGTDESPLCNQDSCSDSNGGCTHQCVQGPYGAQCVCTSGYLLAND 1358
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D+ EC+ PG+CSQ C N +GS+ C C++ Y L+ + TCK + L++++R+
Sbjct: 1359 SKTCEDIYECDIPGFCSQHCYNVRGSFRCWCDKEYTLDTNGRTCKVTASESLLLLVASRN 1418
Query: 125 SILVADLEEK------------------------------------------GKDHRAQD 142
I+ ++ + G D R
Sbjct: 1419 QIVADNITSQVHNIYSVVRNGSHIVAIDFDSISSRVFWSDGGQGTIWSAFLNGTDRRV-- 1476
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ SG+ + E + DW+G ++YW D L IEV +GT+R VL N++ PRG+ LDP
Sbjct: 1477 LLNSGVTMTESMVVDWVGRNLYWTDYALETIEVSKLDGTHRTVLISHNVSNPRGLALDPR 1536
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+FW+DWG +PRIER MDGS R+ I+ KI+WP+G+T+D R +YF DS LD+I
Sbjct: 1537 ISDHLMFWSDWGHHPRIERASMDGSLRTVIVQDKIFWPSGITIDYPNRLLYFIDSYLDYI 1596
Query: 263 D 263
D
Sbjct: 1597 D 1597
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 183/349 (52%), Gaps = 65/349 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGL-CSNTCHPTPLGALCTCPP 57
+C+ + KVCDG DCP G DE G CD+ C F L C CHP+P G +C CP
Sbjct: 254 KCIPVLKVCDGTLDCPGGEDETNITKGRFCDVNLC---FILSCEYQCHPSPNGGICHCPL 310
Query: 58 GEIL-SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAA 116
G ++ N++ TC D ++C+ G C QMC + G + C C EGYVLE+ H +
Sbjct: 311 GFVVDQNNTRTCVDFDDCQIWGICDQMCEDRTGHHQCHCAEGYVLEHQQHCKANTSSEQP 370
Query: 117 FLIISNRHSILVADLEEK---------------GKD-----HR------AQDIVVS---- 146
F+I SN +L+ D+ + G D HR QD V S
Sbjct: 371 FVIFSNGRDLLIGDIHGRTFSMLVESQNHGVAVGVDFHNHLHRVFWTDTVQDKVFSVDIN 430
Query: 147 --------GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
LD E LA DWI +Y +++++NRI++ + +G++RI L +N+ PRG+
Sbjct: 431 GLNIQEVVSLDDPENLAIDWINNKLYLVETKVNRIDMVNIDGSHRITLITENLGHPRGIA 490
Query: 199 LDPSPGTRWLFWTDW----GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
+DP+ G +LF++DW GE P++ER MDG+NR ++ TK+ WP G+TLDI +RVY+
Sbjct: 491 VDPTVG--YLFFSDWESLSGE-PKVERAFMDGTNRKDLVKTKLGWPAGITLDIVLKRVYW 547
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
D + D+I+ V Y I RK + GG+ +P G + +G
Sbjct: 548 VDCRFDYIE--------TVTYDGIQRKT--VVHGGSLIPHPFGISLFEG 586
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 179/409 (43%), Gaps = 96/409 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKF-GLCSNTCHPTPLGALCTCPPGEILSN 63
C+++ KVC+ DC + +DE GC + EC C C T C+C PG L
Sbjct: 3058 CIDMVKVCNHLDDCSDNSDEK-GCGVNECNDPLLSGCDQNCTDTLTSFYCSCRPGYKLMF 3116
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D+ +C D++EC E P CSQ C N GSYIC C GY+ E D +C+ ++ +LI SN
Sbjct: 3117 DNRSCDDIDECKETPFVCSQKCENVMGSYICKCAPGYLREPDGKSCRQNSNIEPYLIFSN 3176
Query: 123 R------------HSILVADL-------------------------EEKGKDHRAQDIVV 145
R +S+++ L E + ++IV+
Sbjct: 3177 RYYLRNLTLDGHFYSLILQGLGNAVALDFDRVEKRLYWIDAENKVIERMFLNKTNREIVI 3236
Query: 146 S-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPRG 196
+ L E LA DW+ +YW+D+ LN + V D +G R LA+ + PRG
Sbjct: 3237 NHKLPAAESLAIDWVTRKLYWVDAYLNCLSVSDLDGRYRRKLAEHCVDVNNTFCFENPRG 3296
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ L P G ++W DW I R+GMDG N+S IISTKI WPNG+T+D +Y+AD
Sbjct: 3297 IALHPQYGH--VYWADWAHRAYIGRVGMDGVNKSVIISTKIEWPNGITIDYTNDLLYWAD 3354
Query: 257 SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE 316
+ L +I+ LE G + + G L
Sbjct: 3355 AHLGYIEYSDLE----------------------------------GRHRHTVYDGTLSH 3380
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ + ++Y WTDW + DGS+R+ +++T
Sbjct: 3381 PFAITIFEDIIY-----------WTDWNTRTVEKGNKYDGSDRTVLVNT 3418
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 151/379 (39%), Gaps = 97/379 (25%)
Query: 39 LCSNTCHPTPLGA-LCTCPPGEILSN-DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCN 96
LC C G +C+C PG S D +C D+NECEQ G C Q C NTKGSY CSC
Sbjct: 3943 LCEQNCTQLSEGGFICSCRPGFKASILDRNSCDDINECEQFGVCPQHCQNTKGSYECSCA 4002
Query: 97 EGY--VLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGL 154
EG+ V ++ C A + L+ N EK D+ + G + ++ +
Sbjct: 4003 EGFRSVSDHYGKRCAADGNPPLLLLPENVRIRKYNLSSEKFSDY------LEGEERIQAI 4056
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
YDW P G+ L T +++G
Sbjct: 4057 DYDW----------------------------------DPEGIGLSVIYYTVLGHGSEFG 4082
Query: 215 ENPRIERIGMDGSNRSTIISTK-----IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEI 269
R + + + I P+GL +D R +Y++D+K
Sbjct: 4083 AIKRAYIPNFESGTNNLVSKVNLNLKYIMQPDGLAVDWVGRHIYWSDAK----------- 4131
Query: 270 KTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGML 327
+I A +DG L+S QL + A+ ++ + G++
Sbjct: 4132 -----------------------SKRIQVAKLDGRYTKWLISTQLDQPAAVVVNPKLGLM 4168
Query: 328 YYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFAD 386
Y WTDWG P+IE MDG +R+ ++ + WP GLT+D + R+Y++D
Sbjct: 4169 Y-----------WTDWGREPKIESAWMDGQHRNILVQEDLGWPTGLTIDYLNNDRIYWSD 4217
Query: 387 SKLDFIDFCNYDGTGRQQV 405
K + I+ +DGT R+ V
Sbjct: 4218 FKENNIESIKHDGTDRRIV 4236
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 115/243 (47%), Gaps = 50/243 (20%)
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
R+ ++SG +G+A+DWI IY+ + I E+G+ R V+A ++++PR ++
Sbjct: 2428 RSSTAIISGKGNPDGIAFDWINRRIYYSNYTNETINSMAEDGSKRTVIA--HVSKPRAIV 2485
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
LDP G +++WTDWG N +IER + G+ R I+++ + WPNGLTLD +Y+AD+
Sbjct: 2486 LDPCRG--YMYWTDWGTNAKIERATLGGNFRVPIVNSSLVWPNGLTLDYENDLLYWADAS 2543
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
L KI ++ + G+ ++V+ + +
Sbjct: 2544 LQ----------------------------------KIERSTLTGTQREVIVN-RAFHPF 2568
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 378
+L L ++++WTDW DGS + + + + PNG+ + +
Sbjct: 2569 SLTLYG-----------QYIYWTDWNTKKIYRANKYDGSGQMAMTMSFPFRPNGIRVIVK 2617
Query: 379 TRR 381
++
Sbjct: 2618 NQQ 2620
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 123/267 (46%), Gaps = 59/267 (22%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G L DN TC ++FL++S + HS
Sbjct: 2001 CQQICLPIPGGLFSCACASGLKLNPDNRTCSPY---SSFLVVSMLSTIRGFSLQLSDHSE 2057
Query: 127 LVADLEEKGKDHRAQDI-VVSGL------------------------------------D 149
+ + +G++ D+ V SG +
Sbjct: 2058 AMVPVAGQGRNALHVDVDVFSGFIYWCDFSSSVTSYNAIRRIRPDGSSFTNIVTQGIGEN 2117
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ G++Y+ ++ ++ IEV N T R +L K + +PR +++DP R+
Sbjct: 2118 GVRGIAVDWVAGNLYFTNAFVSETLIEVLRINTTYRRILLKATVDRPRDIVVDPK--NRY 2175
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
LFW D+G++P+IER +D +NR+ ++S I P GL +D + R VY+ D LD I +
Sbjct: 2176 LFWADYGQSPKIERSFLDCTNRTVLVSEGIVTPRGLAVDHSNRYVYWVDDSLDIIARIGM 2235
Query: 268 EIKTN--VNYSTIFRKLYWIDEGGNGV 292
E + + + Y + + Y I GN +
Sbjct: 2236 EAEVSEVIRYGSRYPTPYAITVFGNSI 2262
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 174/418 (41%), Gaps = 74/418 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCD-----LAECKHKFGLCSNTCHPTPLGALCT----C 55
C++ VCDG+ DC + DE GC+ EC C + P+ +C C
Sbjct: 210 CISQNMVCDGEDDCRDNGDEN-GCESSTHRFHECYPGEWACPESGKCIPVLKVCDGTLDC 268
Query: 56 PPGEILSN--DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAIN 112
P GE +N C D+N C C C + IC C G+V++ +N TC +
Sbjct: 269 PGGEDETNITKGRFC-DVNLCFILS-CEYQCHPSPNGGICHCPLGFVVDQNNTRTCVDFD 326
Query: 113 HSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNR 172
+ I + D + H A+ V L+ + + + + S
Sbjct: 327 DCQIWGICDQ----MCEDRTGHHQCHCAEGYV---LEHQQHCKANTSSEQPFVIFSNGRD 379
Query: 173 IEVCDENGTNRIVLAKDNITQPRGMML--DPSPGTRWLFWTDWGENPRIERIGMDGSNRS 230
+ + D +G +L + +Q G+ + D +FWTD ++ ++ + ++G N
Sbjct: 380 LLIGDIHGRTFSMLVE---SQNHGVAVGVDFHNHLHRVFWTDTVQD-KVFSVDINGLNIQ 435
Query: 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN 290
++S P L +D ++Y ++K++ ID
Sbjct: 436 EVVSLDD--PENLAIDWINNKLYLVETKVNRID--------------------------- 466
Query: 291 GVPLKIGKANMDGSNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
N+DGS+ L++ L +A+D G L++S W P+
Sbjct: 467 -------MVNIDGSHRITLITENLGHPRGIAVDPTVGYLFFSD--------WESLSGEPK 511
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ER MDG+NR ++ TK+ WP G+TLDI +RVY+ D + D+I+ YDG R+ V+
Sbjct: 512 VERAFMDGTNRKDLVKTKLGWPAGITLDIVLKRVYWVDCRFDYIETVTYDGIQRKTVV 569
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 142/368 (38%), Gaps = 113/368 (30%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGP----------------GCDLAECKHKF--------- 37
+RC+ ++C+ DC +G+DE C C +
Sbjct: 3863 NRCIYKHELCNHVDDCGDGSDEKEEQCVASTSRPCREDEFKCSNGHCISQHLVCDDVDDC 3922
Query: 38 -------------------GLCSNTC-HPTPLGALCTCPPGEILSN-DSVTCQDMNECEQ 76
LC C + G +C+C PG S D +C D+NECEQ
Sbjct: 3923 GDHFDETGCNTGKERSCAENLCEQNCTQLSEGGFICSCRPGFKASILDRNSCDDINECEQ 3982
Query: 77 PGYCSQMCTNTKGSYICSCNEGY--VLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK 134
G C Q C NTKGSY CSC EG+ V ++ C A + L+ N EK
Sbjct: 3983 FGVCPQHCQNTKGSYECSCAEGFRSVSDHYGKRCAADGNPPLLLLPENVRIRKYNLSSEK 4042
Query: 135 GKDHRAQDIVVSGLDLVEGLAYDW----IGGHIYWLD--------SRLNRIEVCD-ENGT 181
D+ + G + ++ + YDW IG + + + R + + E+GT
Sbjct: 4043 FSDY------LEGEERIQAIDYDWDPEGIGLSVIYYTVLGHGSEFGAIKRAYIPNFESGT 4096
Query: 182 NRIV----LAKDNITQPRGMMLD---------------------PSPGTRWL-------- 208
N +V L I QP G+ +D T+WL
Sbjct: 4097 NNLVSKVNLNLKYIMQPDGLAVDWVGRHIYWSDAKSKRIQVAKLDGRYTKWLISTQLDQP 4156
Query: 209 ------------FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFA 255
+WTDWG P+IE MDG +R+ ++ + WP GLT+D + R+Y++
Sbjct: 4157 AAVVVNPKLGLMYWTDWGREPKIESAWMDGQHRNILVQEDLGWPTGLTIDYLNNDRIYWS 4216
Query: 256 DSKLDFID 263
D K + I+
Sbjct: 4217 DFKENNIE 4224
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 16/181 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ + ++ VE L +DWI ++YW D+ I V +R + + N+ PR +++ P
Sbjct: 752 LTANRVESVESLTFDWISKNLYWTDASYRSISVMRLADKSRRAIIQ-NLNNPRSIVVHPI 810
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G ++F+TDW +I R DGSN I++T + WPNGL +D R+Y+ D+ D I
Sbjct: 811 AG--YIFFTDWFRPAKIMRAWSDGSNLLPIVNTTLGWPNGLAIDWGALRLYWVDAFFDKI 868
Query: 263 DCKSLEIKTNVNYS-----------TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+ + + N T+F + + G +++ K MDG + ++ S
Sbjct: 869 EHSTFDGLDRRNLGHIQQMTHPFGLTVFGDYVFFTDWRLGAIVRVRK--MDGGDMRVIRS 926
Query: 312 G 312
G
Sbjct: 927 G 927
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 138/356 (38%), Gaps = 65/356 (18%)
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
A++HS ++ + ++A + G + +++ G A G I W+D
Sbjct: 2212 AVDHSNRYVYWVDDSLDIIARI---GMEAEVSEVIRYGSRYPTPYAITVFGNSIIWVDRN 2268
Query: 170 LNRIEVC--DENGTNRIVLAKDNITQPRGM-MLDPSPGTRWLFWTDWGENPRIERIG--- 223
L +I + N + +DNI R + + D S R + NP +E G
Sbjct: 2269 LKKIFQASKEPNSNESPTVIRDNINWLRDVTIFDQSVQPRSP--AEVNHNPCLENNGGCT 2326
Query: 224 --------------------MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
++G +S I T+ + L + + + D F
Sbjct: 2327 HFCFALPGLDTPKCGCAFGTLEGDGKSCAIPTENFLIFALENTLRSLHLDPEDHSPPFQP 2386
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG---SNASILVSGQLYEALAL 320
+ ++ Y I ++Y+ G+G +I N++ S+ +I+ + +A
Sbjct: 2387 ISVERVAVDLAYDDISNRIYFTQSLGSGNG-QISYVNLNSGTRSSTAIISGKGNPDGIAF 2445
Query: 321 DLENGMLYYSTL------------------------------KCTRWLFWTDWGENPRIE 350
D N +YYS C +++WTDWG N +IE
Sbjct: 2446 DWINRRIYYSNYTNETINSMAEDGSKRTVIAHVSKPRAIVLDPCRGYMYWTDWGTNAKIE 2505
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
R + G+ R I+++ + WPNGLTLD +Y+AD+ L I+ GT R+ ++
Sbjct: 2506 RATLGGNFRVPIVNSSLVWPNGLTLDYENDLLYWADASLQKIERSTLTGTQREVIV 2561
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 148/345 (42%), Gaps = 73/345 (21%)
Query: 80 CSQMC---TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
CS +C + Y C+C G+ L YD+ TC + + FLI I L + K
Sbjct: 1683 CSHLCLLSSQMPHLYSCACPSGWSLSYDSVTC--LRDNQPFLITVRYSVIFGISLNPEVK 1740
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS--RLNRIEVCDENGTNRIVLAK-DNITQ 193
+ A + ++G+ + +D IYW+++ ++R++ +GTNR VL +
Sbjct: 1741 SNDAM-VPIAGIMNGYDVEFDDSEQFIYWVENPGEIHRVKT---DGTNRTVLVSLSRLGS 1796
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG---------SNRSTIISTKIYWPNGLT 244
+ LD +R L++T+ G IE + + G +N T++ I P G+T
Sbjct: 1797 SMSLALDWI--SRNLYYTNPG-TMSIEVLKLRGDVRYKKTLITNDGTVLGVGI--PVGIT 1851
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D A ++Y++D D +GVP KI ANMDG+
Sbjct: 1852 VDPANGKLYWSDQGTD-----------------------------SGVPAKIASANMDGT 1882
Query: 305 NASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
+L +G L E + LD++ LY++ IER +DG+NR I
Sbjct: 1883 FPKVLFTGNLEHLEFITLDIKEQKLYWAVTS------------TGVIERGNVDGTNR-MI 1929
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+ + P G+ + +Y+ D + I+ + TG +V+L
Sbjct: 1930 LVNHLSHPWGIA--VYDSYLYYTDEHYEVIERVD-KATGDNKVVL 1971
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 28/194 (14%)
Query: 242 GLTLDIATRRVYFADSKLDFI-------------DCKSLEIKTNVNYSTIFRKLYWIDEG 288
G+ D ++F+D+ D I +E ++ + I + LYW D
Sbjct: 719 GVDFDAQENTIFFSDTSKDMIFKQNINGTGREILTANRVESVESLTFDWISKNLYWTDAS 778
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ + D S +I+ + ++ + G ++F+TDW +
Sbjct: 779 YRSISVM---RLADKSRRAIIQNLNNPRSIVVHPIAG-----------YIFFTDWFRPAK 824
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I R DGSN I++T + WPNGL +D R+Y+ D+ D I+ +DG R+ + I
Sbjct: 825 IMRAWSDGSNLLPIVNTTLGWPNGLAIDWGALRLYWVDAFFDKIEHSTFDGLDRRNLGHI 884
Query: 409 DLMVE-FTNDLMGD 421
M F + GD
Sbjct: 885 QQMTHPFGLTVFGD 898
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 134/321 (41%), Gaps = 38/321 (11%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLAKDNI-TQPRGMMLD 200
IV + G+ D+ +Y++DS L+ I+ CD NG +R V+A D I P + +
Sbjct: 1566 IVQDKIFWPSGITIDYPNRLLYFIDSYLDYIDYCDYNGQHRRQVIASDLILRHPYALTIF 1625
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
++WTD ++ G N+S II I P G+ +A V +S+
Sbjct: 1626 EDS----VYWTDRSTYQVLQANKWHGGNQSVIIR-NIQQPLGV---VAVHPVKQPNSENS 1677
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
C S S+ LY +G L N L++ + +
Sbjct: 1678 ---CASSSCSHLCLLSSQMPHLYSC-ACPSGWSLSYDSVTCLRDNQPFLITVRYSVIFGI 1733
Query: 321 DLE------NGMLYYSTLKCTRWLFWTD------WGENP-RIERIGMDGSNRSTIIS-TK 366
L + M+ + + + + D W ENP I R+ DG+NR+ ++S ++
Sbjct: 1734 SLNPEVKSNDAMVPIAGIMNGYDVEFDDSEQFIYWVENPGEIHRVKTDGTNRTVLVSLSR 1793
Query: 367 IYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND--LMGDNGV 424
+ L LD +R +Y+ + I+ G R + LI TND ++G G+
Sbjct: 1794 LGSSMSLALDWISRNLYYTNPGTMSIEVLKLRGDVRYKKTLI------TNDGTVLG-VGI 1846
Query: 425 P-ALALDLENGMLYYSTEGAE 444
P + +D NG LY+S +G +
Sbjct: 1847 PVGITVDPANGKLYWSDQGTD 1867
>gi|426222491|ref|XP_004005424.1| PREDICTED: low-density lipoprotein receptor-related protein 2 [Ovis
aries]
Length = 4651
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 131/370 (35%), Positives = 189/370 (51%), Gaps = 61/370 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCDG DCP+G DE P C+ C G C++ C P GA C CP G +L ND
Sbjct: 1330 CVNLSAVCDGVPDCPSGTDESPLCNQNSCSDSNGGCTHQCIQGPYGAQCQCPLGYLLGND 1389
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++EC PG+CSQ C N +GS+ C C+ Y L+ D TCK + S + L+++++
Sbjct: 1390 SKTCEDIDECRTPGFCSQYCYNMRGSFRCWCDSEYRLDADQRTCK-VTESQSLLLVASQS 1448
Query: 125 SILVADLEEKGK------DHRAQDIVV--------------------------------- 145
++ ++ + G H + + V
Sbjct: 1449 QLVAGNMTQNGYFVYPVIQHGSHIVAVDFDSVSGRIFWSDGTQGKIWSAFQNGTDRKLVL 1508
Query: 146 -SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
SG+ + +A DWIG ++YW D L IEV +G+ R VL NIT G+++DP
Sbjct: 1509 DSGVSMTGDIAVDWIGRNLYWTDISLRTIEVAKLDGSRRTVLLSGNITNLGGLVVDPRAT 1568
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID- 263
R +FW+DWG +PRIER MDGS R+ I+ KIYWPNGL LD R +YF D LDFID
Sbjct: 1569 DRVMFWSDWGSHPRIERASMDGSQRTVIVQEKIYWPNGLALDYPNRLLYFMDGYLDFIDF 1628
Query: 264 ------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM-DGSNASILV 310
L ++ + S +YW D + ++ KAN G N S+++
Sbjct: 1629 CHYDGSNRRQVIASDLILRHPYSLSLFEDTVYWSDRATH----EVMKANKWHGGNQSVVM 1684
Query: 311 SGQLYEALAL 320
+ L++ L +
Sbjct: 1685 T--LHQPLGI 1692
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 149/543 (27%), Positives = 241/543 (44%), Gaps = 126/543 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+C+ ++KVCDG DCP G DE G CD+ C G C CH +P G +C CPPG
Sbjct: 283 KCIPISKVCDGTLDCPGGEDESNITAGQQCDVNLCP-SLG-CEYQCHKSPGGGMCYCPPG 340
Query: 59 EILS-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I++ N + C D ++C+ G C Q+C + G + C C EGYVLE H + AF
Sbjct: 341 FIVNQNRTNNCVDFDDCQIWGVCDQICEDRIGHHRCHCAEGYVLERQKHCRANSSFGEAF 400
Query: 118 LIISNRHSIL-----------VADLEEKG-----------------------------KD 137
+I S+ +L +A+ + +G
Sbjct: 401 VIFSDGRDLLKGSIHGNNFQILAESQNRGLAVGVDFHYRLRRVFWTDVVQNKVFSVDISG 460
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
R ++++ ++ E LA DW+ +Y +++R+N I+V + +G++RI L +++ PRG+
Sbjct: 461 SRIREVLGVSIEDPENLAVDWVNNKLYIVETRVNCIDVVNLDGSHRITLISEHLGHPRGI 520
Query: 198 MLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
+DP+ G +LF++DW PRIER MDGSNR +++TK+ WP G+TLD+ ++RVY+
Sbjct: 521 AVDPTVG--YLFFSDWQNVFGVPRIERAYMDGSNRKDLVTTKLGWPGGITLDLVSKRVYW 578
Query: 255 ADSKLDFID-------------------------------------CKSLEIKTNVNYST 277
DS+ D+I+ K +K N T
Sbjct: 579 VDSRFDYIETVTYDGLKRMTVIHGGADIPHPFSISLFEGQLFFTDWTKMAVLKANKFKET 638
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG--QLYEALALDLENGMLYYSTLKCT 335
R Y GV + G D N +G Q L+ NG L Y KC
Sbjct: 639 NPRLYYRSSLKPFGVTVYHGLRQPDARNPCAHENGGCQHICVLSHRTFNGGLGYR-CKC- 696
Query: 336 RWLFWTDWGE--------------NPRIERIGMDGSNRSTII-----STKIYWPNGLTLD 376
R + DW + N + I + S+++ +I S+ ++ G+ D
Sbjct: 697 RLGYIPDWDDYHCVAAERFLLFSSNLVVRGIPLTLSHQTDVILPVSGSSSVFL--GIDFD 754
Query: 377 IATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGML 436
+ ++F+D+K + I DGTGR+ + + GV +L+ D + L
Sbjct: 755 AREKAIFFSDTKKNIIYRQKLDGTGREIITANRVP-----------GVQSLSFDWISRNL 803
Query: 437 YYS 439
Y++
Sbjct: 804 YWT 806
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 157/313 (50%), Gaps = 53/313 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHK-FGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ + KVC+ DC + +DE GC + EC C+ C T C+C PG L +
Sbjct: 3087 CIEMVKVCNHFPDCLDSSDEK-GCGINECNDPTLSGCNQNCTDTLTSFYCSCNPGYKLLS 3145
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC E P CSQ C N G+YIC C GY+ E D TC+ ++ LI SN
Sbjct: 3146 DKRTCVDIDECKETPFICSQKCENLPGTYICKCAPGYIREPDGKTCRQNSNIEPDLIFSN 3205
Query: 123 RHSI-------------------LVA-------------DLEEK-------GKDHRAQDI 143
R+ + +VA D+E K K +R + +
Sbjct: 3206 RYYLRNLTIYDNLYSLILQGLGNVVALDFDRVEKRLYWLDIENKVIERMFVNKTNR-ETV 3264
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPR 195
+ L E LA DW+ +YW+DS L+ + V D +G R LA+ + PR
Sbjct: 3265 LKHNLPGAESLAVDWVTRKLYWVDSYLHCLSVSDLSGRYRRKLAEHCVDANNTFCFENPR 3324
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G++L P G ++W DWG+ I R+GMDG+++S IISTKI WPNGLT+D +Y+A
Sbjct: 3325 GLVLHPQYGH--VYWADWGDRAYIGRVGMDGTHKSLIISTKIMWPNGLTIDYTNDLLYWA 3382
Query: 256 DSKLDFIDCKSLE 268
D+ L +I+ L+
Sbjct: 3383 DAHLGYIEYSDLD 3395
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 172/367 (46%), Gaps = 75/367 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGA-LCTCPPG-EI 60
RC+ +VCD DC + DE GC+ + + LC + C G +C+C PG +
Sbjct: 3940 RCIPQHRVCDHVNDCGDNFDEM-GCNRGKDRSCAESLCEHNCTQLREGGFICSCRPGFKP 3998
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK-AINHSAAFLI 119
S D C+D+NEC Q G C Q+C NTKGSY CSC EG+ D + + A + S L+
Sbjct: 3999 NSIDRNLCEDINECTQFGSCPQICHNTKGSYECSCAEGFTSLSDRYGERCAADGSPPLLL 4058
Query: 120 IS--------NRHSILVADLEEKGKDHRAQD----------------------------- 142
+ N S+ ++ E + +A D
Sbjct: 4059 LPENVRIRKYNLSSLQFSEYLEDQERIQAMDYDWDPEGTGLSVVYYTVLGERSNSGAIKR 4118
Query: 143 -------------IVVSGLDL-----VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
++ LDL +GLA DW+G HIYW D+R RIEV + +G R
Sbjct: 4119 AYIPNFESGNNNPVMEVNLDLKYVVQPDGLAVDWVGRHIYWSDARRQRIEVAELDGRYRK 4178
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L + QP ++++P G +++WTDWGENP+IE MDG R ++ + WP GL
Sbjct: 4179 WLISTELGQPAAIVVNPKLG--FMYWTDWGENPKIESAWMDGERRKVLVQEDLGWPTGLC 4236
Query: 245 LD-IATRRVYFADSKLDFIDC-------KSLEIKTNVN-YS-TIFR-KLYWI--DEGGNG 291
+D + R+Y++D K + ++ + + + + VN YS IF +LYW D+G
Sbjct: 4237 IDYMNDDRIYWSDLKDNIVETIKYDGTDRRIVVTSAVNPYSLDIFESQLYWTSKDKGEVW 4296
Query: 292 VPLKIGK 298
+ K G+
Sbjct: 4297 IQDKFGR 4303
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 99/179 (55%), Gaps = 19/179 (10%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+VVSG+ EG+A+DW+ IY+ D I+ +G+ V+A+ + +PRG++LDP
Sbjct: 2460 VVVSGIGSPEGIAFDWVNKRIYYSDYTNQMIKSIATDGSRHAVIAQ--VPKPRGIVLDPC 2517
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWG N +IE M G +R +++ + WPNGLT+D +Y+AD+ L+ I
Sbjct: 2518 QG--YMYWTDWGTNAKIETATMGGYSRRSLVDRGLVWPNGLTMDYEQNLLYWADANLEKI 2575
Query: 263 DCKSLE--------IKTNVNYSTIF--RKLYWIDEGGNGVPLKIGKAN-MDGSNASILV 310
+ LE + N + + +YW D + KI +AN +DGS+ + +
Sbjct: 2576 ERMDLERYLREVIVSRANSPFGLALYGQYIYWTDM----LTQKIYRANKVDGSDQTAVT 2630
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 122/267 (45%), Gaps = 59/267 (22%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G+ L D TC N +F+++S + HS
Sbjct: 2029 CQQICLPVPGRLFSCACATGFKLNPDQRTCSPYN---SFIVVSTLRTIRGFSLQLSDHSE 2085
Query: 127 LVADLEEKGKDHRAQDIVVS-------------------------------------GLD 149
+ + G++ D+ VS G++
Sbjct: 2086 AMVPVAGPGRNALHVDVDVSSGFIYWCDFNISVTSNNAIRRIKPDGSNFTNIVTDGIGVN 2145
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
+ G+A DW+ G++Y+ ++ + IEV N T+R +L K + PR +++DP R+
Sbjct: 2146 GIRGIAVDWVAGNLYFTNAFRSETLIEVLRINTTHRHILLKTIVDMPRDIVVDPK--NRY 2203
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
LFW+D+G+NP+IER +D +NR+ ++S P GL LD ++ +Y+ D +D I S+
Sbjct: 2204 LFWSDYGQNPKIERSFLDCTNRTVLVSDITATPRGLALDHSSNYIYWVDDAVDLIARISI 2263
Query: 268 EIKTN--VNYSTIFRKLYWIDEGGNGV 292
E + + + + + Y I GN +
Sbjct: 2264 EGGESEVIRFGSHYPAPYAITVFGNSI 2290
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 160/372 (43%), Gaps = 74/372 (19%)
Query: 48 PLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCT-NTKGSYICSCNEGYVLEYDNH 106
PLG + P + +S+ N C CS +C ++K Y C+C G+ L D+
Sbjct: 1689 PLGIVVVHPAKQPVSS--------NPCSN-TRCSHLCLLSSKSLYSCACPSGWSLSRDSA 1739
Query: 107 TCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
TC + AFLI+ I L K + +SG+ +A D+ IYWL
Sbjct: 1740 TC--VRDDQAFLIVVRNSIIFGISLNPDVKTFDGM-VPISGVRNGYDVAVDYSEQFIYWL 1796
Query: 167 DS--RLNRIEVCDENGTNRIVLAK-DNITQPRGMMLDPSPGTRWLFWTDW-GENPRIERI 222
++ ++R++ +GTNR V A ++ + LD +R L++TD + ++ +
Sbjct: 1797 ENPGEIHRVKT---DGTNRTVFAPLSSLGASASLALDWL--SRNLYFTDHVTRSIKVVTL 1851
Query: 223 GMDGSNRSTII-----STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST 277
G D S T++ S + P G+T+D ++Y++D +
Sbjct: 1852 GGDVSYGKTLVTNDGTSLGVGLPVGITVDPINGKLYWSDRGTN----------------- 1894
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA--LALDLENGMLYYSTLKCT 335
NG+P KI ANMDG + L +G L + LD+E LY++
Sbjct: 1895 ------------NGLPPKIASANMDGKSPRTLFTGSLENVAFITLDIEEQKLYWAV---- 1938
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
IER +DG+NR I+ + +P GL + +Y++D + + I+
Sbjct: 1939 --------SSTGVIERGNVDGTNR-MILVNHLSYPWGLA--VHGPFLYYSDEEYEVIERV 1987
Query: 396 NYDGTGRQQVIL 407
+ TG +++L
Sbjct: 1988 D-KATGANKIVL 1998
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 48/231 (20%)
Query: 78 GYCSQMCT------NTKGSYICSCNEGYVLEYDNHTCKAI-------------------- 111
G C +C N Y C C GY+ ++D++ C A
Sbjct: 673 GGCQHICVLSHRTFNGGLGYRCKCRLGYIPDWDDYHCVAAERFLLFSSNLVVRGIPLTLS 732
Query: 112 NHSAAFLIISNRHSILVA---DLEEKG---KDHRAQDIVVSGLDL-------------VE 152
+ + L +S S+ + D EK D + I LD V+
Sbjct: 733 HQTDVILPVSGSSSVFLGIDFDAREKAIFFSDTKKNIIYRQKLDGTGREIITANRVPGVQ 792
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
L++DWI ++YW DS + V +R + + N+ PR +++ P+ G ++F++
Sbjct: 793 SLSFDWISRNLYWTDSSYRSVSVIKLADKSRRTIIQ-NLNNPRSIVVHPTAG--YIFFSV 849
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
W +I R DGSN I++T + WP+GL++D ++ R+Y+ D+ D I+
Sbjct: 850 WYRPAKILRAWADGSNILPIVNTTLGWPSGLSIDWSSSRLYWIDAFFDKIE 900
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 142/354 (40%), Gaps = 61/354 (17%)
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
A++HS+ ++ + L+A + +G + +++ G A G I W+D
Sbjct: 2240 ALDHSSNYIYWVDDAVDLIARISIEGGE---SEVIRFGSHYPAPYAITVFGNSIIWVDRN 2296
Query: 170 LNRIEVC--DENGTNRIVLAKDNI------------TQPRG---MMLDPSPG-----TRW 207
L +I + N +R + +DNI QPR + +P G T +
Sbjct: 2297 LKKILQASKEPNRADRPTVIRDNIDWLRDVTIFDQSVQPRSPAEVNNNPCLGNNGGCTHF 2356
Query: 208 LFWTDWGENPRIERI--GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
F + P+ + + +S IS++ + L + + R D F
Sbjct: 2357 CFALPKSQTPKCDCAFGTLQADGKSCAISSENFLIFALDDSLRSLRFDPKDYSQPFPAIS 2416
Query: 266 SLEIKTNVNYSTIFRKLYWID--EGGNGVPLKIGKANMDGSNASILVSG-QLYEALALDL 322
++ ++Y +I ++Y+ G G I N S +++VSG E +A D
Sbjct: 2417 VEKMAVALDYDSIDNRIYFTQLLPSGKGQISYI-NLNSRSSPPTVVVSGIGSPEGIAFDW 2475
Query: 323 ENGMLYYSTL------------------------------KCTRWLFWTDWGENPRIERI 352
N +YYS C +++WTDWG N +IE
Sbjct: 2476 VNKRIYYSDYTNQMIKSIATDGSRHAVIAQVPKPRGIVLDPCQGYMYWTDWGTNAKIETA 2535
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
M G +R +++ + WPNGLT+D +Y+AD+ L+ I+ + + R+ ++
Sbjct: 2536 TMGGYSRRSLVDRGLVWPNGLTMDYEQNLLYWADANLEKIERMDLERYLREVIV 2589
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 29/185 (15%)
Query: 242 GLTLDIATRRVYFADSKLDFI-----DCKSLEIKT--------NVNYSTIFRKLYWIDEG 288
G+ D + ++F+D+K + I D EI T ++++ I R LYW D
Sbjct: 750 GIDFDAREKAIFFSDTKKNIIYRQKLDGTGREIITANRVPGVQSLSFDWISRNLYWTDSS 809
Query: 289 GNGVP-LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
V +K+ D S +I+ + ++ + G +++S W
Sbjct: 810 YRSVSVIKLA----DKSRRTIIQNLNNPRSIVVHPTAGYIFFSV-----------WYRPA 854
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+I R DGSN I++T + WP+GL++D ++ R+Y+ D+ D I+ +DG+ R+ +
Sbjct: 855 KILRAWADGSNILPIVNTTLGWPSGLSIDWSSSRLYWIDAFFDKIEHSTFDGSDRKALTN 914
Query: 408 IDLMV 412
I +
Sbjct: 915 IPQLT 919
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 14/136 (10%)
Query: 307 SILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 366
S+++ G L +ALD + + + L+W D EN IER+ ++ +NR T++
Sbjct: 3220 SLILQG-LGNVVALDFD---------RVEKRLYWLDI-ENKVIERMFVNKTNRETVLKHN 3268
Query: 367 IYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPA 426
+ L +D TR++Y+ DS L + D +GR + L + V+ N +N
Sbjct: 3269 LPGAESLAVDWVTRKLYWVDSYLHCLSV--SDLSGRYRRKLAEHCVDANNTFCFENPR-G 3325
Query: 427 LALDLENGMLYYSTEG 442
L L + G +Y++ G
Sbjct: 3326 LVLHPQYGHVYWADWG 3341
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK-DNITQPRGMMLDP 201
IV + L GL+ DW +YW+D+ ++IE +G++R L +T P G+ +
Sbjct: 869 IVNTTLGWPSGLSIDWSSSRLYWIDAFFDKIEHSTFDGSDRKALTNIPQLTNPFGLAV-- 926
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+++ TDW I R G + +S I+ + +
Sbjct: 927 --SQDYIYVTDWRRG--IIRFGKYNTGQSVILRSGV 958
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMML 199
+ +V GL GL D+ +YW D+ L +IE D E +++++ N P G+ L
Sbjct: 2543 RSLVDRGLVWPNGLTMDYEQNLLYWADANLEKIERMDLERYLREVIVSRAN--SPFGLAL 2600
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
++++WTD +DGS+++ + T + P G+
Sbjct: 2601 ----YGQYIYWTDMLTQKIYRANKVDGSDQTAVTMTLPFRPKGI 2640
>gi|156407458|ref|XP_001641561.1| predicted protein [Nematostella vectensis]
gi|156228700|gb|EDO49498.1| predicted protein [Nematostella vectensis]
Length = 629
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 140/362 (38%), Positives = 190/362 (52%), Gaps = 58/362 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
RC+ ++VCDG+ DCP+ +DEGPGC L +C G C+ C P G C+C PG L++
Sbjct: 255 RCIAKSQVCDGRVDCPDASDEGPGCGLDQCHSNNGGCAQLCMDVPEGVQCSCRPGFTLAS 314
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+D+NEC CSQ C NT+GS+ C C +GY LE D CKA + FL S R
Sbjct: 315 DNKTCEDINECLNSSSCSQRCFNTRGSFSCKCVQGYRLEPDKRRCKAADSIRPFLYFSTR 374
Query: 124 HSILVADLEEKG-------------------KDHR--------------------AQDIV 144
I L ++ R +D++
Sbjct: 375 REIRKLGLPPSQSYTFAVRRLRNTIGIDFDWREKRLYWSDVYKKVISRSYFNGTGREDLI 434
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
L EG+A DWIG ++YW D R +RIEV G R VL +++ PRG++LD + G
Sbjct: 435 TDALITAEGVAVDWIGRNLYWSDMRSDRIEVSTLEGKWRRVLLSEDVESPRGLVLDSNAG 494
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTI-ISTKIYWPNGLTLDIATRRVYFADSKLDFI- 262
+LFWTDWG +PR+ER +DGSNR I KI WPNGLTLD+AT+RVY+ D+KLD I
Sbjct: 495 --YLFWTDWGTSPRVERSWLDGSNRFVISFGIKIVWPNGLTLDLATKRVYWIDAKLDHIV 552
Query: 263 ----DCKSLEI----KTNVNYS---TIFRK-LYWIDEGGNGVPLKIGKANMDGSNASILV 310
D S I +N+ T+F LYW D V L++ K + G N ++L
Sbjct: 553 SCEYDGSSKRIVLSGSRQINHPFAMTLFEDYLYWTDWQNKHV-LRVSK--LHGENVTLLS 609
Query: 311 SG 312
+G
Sbjct: 610 AG 611
>gi|308463167|ref|XP_003093860.1| CRE-LRP-1 protein [Caenorhabditis remanei]
gi|308248901|gb|EFO92853.1| CRE-LRP-1 protein [Caenorhabditis remanei]
Length = 4438
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 125/299 (41%), Positives = 165/299 (55%), Gaps = 43/299 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ L ++CDGK CP G DEG C C C+ CH +P G +C+CP GE L N
Sbjct: 1063 CIPLHQLCDGKRHCPGGTDEGGRCARDLCSADRAGCAFKCHNSPNGPICSCPSGEQLVN- 1121
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-ISNR 123
C+ NEC CSQ C + K + CSC+EGY L+ + TCK N+ I +SNR
Sbjct: 1122 KTKCEPENECLDASSCSQRCKDEKHGFTCSCDEGYELDANKRTCKVTNNVVDTRIYVSNR 1181
Query: 124 HSILVADLEEKG-------------------------KDHRAQDI-------------VV 145
+ I +D + + D R + I +
Sbjct: 1182 NRIYYSDHKLENWHTFGAIVENAIALAWDSLTNRIYWSDIREKKILSADRNGTNATVFIA 1241
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPG 204
GLD+ EG+A DW+G ++YW+DS LN IEV + E+ T R +L NI+QPRG+ +DP G
Sbjct: 1242 DGLDITEGIALDWVGRNLYWVDSSLNTIEVANLEDPTKRTLLVHQNISQPRGIAVDPRKG 1301
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+FWTDWG+NP IER MDG++R I+ TKIYWPN + LD+ T RVYFADSKLDFID
Sbjct: 1302 --LMFWTDWGQNPCIERASMDGTDRQIIVKTKIYWPNTIALDLTTNRVYFADSKLDFID 1358
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 160/384 (41%), Gaps = 114/384 (29%)
Query: 45 HPTPLGALCTCPPGEILSND-SVTCQDMNECEQPGYCSQMCTNTKGSYICSC-NEGYVLE 102
HP+P G CTCP G L + TC D+NEC + GYC Q+C N + + CSC + + L+
Sbjct: 2 HPSPHGGECTCPSGYKLDDRFHRTCSDINECAEFGYCDQLCANHRPGFTCSCLGDCFTLQ 61
Query: 103 Y------DNHT----CKAINHSAAFLIISNR----------------------------- 123
DN T C + N L I+ R
Sbjct: 62 MEHGPGKDNLTMRGYCVSNNADKMRLFIARREGLYRLNPKNPEEEVKKLASGEFIYGIDF 121
Query: 124 --------------HSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
HS AD++++G+ + + + + L LA DWI +Y ++S
Sbjct: 122 DYGDRKIFWTDRLAHSAFSADVDDEGEISQIKKLSLKSLVYPRCLAVDWITNTLYIIESG 181
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
RI+V +G R VL D +T P + LDP G +F+T+ +IE MDG+NR
Sbjct: 182 SRRIDVSSYDGDRRTVLLADGLTLPLDIALDPLRGE--MFFTN---QLKIEAAAMDGTNR 236
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
T++ST + +G+ +DI +R+Y+ D K+D ++ +++Y R++ + +G
Sbjct: 237 RTLVSTHTHQVSGIVVDITAKRIYWVDPKVDRLE--------SIDYQGNDRRI--VAQGM 286
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE--NP 347
N VP G A D + L+WTDW
Sbjct: 287 NTVPHPFGLALFD---------------------------------QHLYWTDWTRLGVI 313
Query: 348 RIERIGMDGSNRSTIISTKIYWPN 371
++E+ G D TK+ W N
Sbjct: 314 QVEKFGSD---------TKLLWSN 328
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 133/309 (43%), Gaps = 56/309 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ KVCD DC + +DE C + EC + LC C +G C C G S
Sbjct: 2888 ECIDDAKVCDRNFDCSDRSDESSLCFIDECSLAEKPLCEQKCIDQKIGYKCDCYEGFFQS 2947
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN-HSAAFLIIS 121
Q E CSQ C + GSY C+C +GY L D+H+CK ++ F +++
Sbjct: 2948 FQ----QSYVFPEGISGCSQKCDDKIGSYKCACVDGYQLSSDDHSCKRVDLEPTPFFLLA 3003
Query: 122 NRHSILVADLEEKGKDHRAQ---DIVVSGLDL---------------------------- 150
N+H I ++ + AQ ++V +DL
Sbjct: 3004 NKHYIRKISMDGNKYEMAAQGFDNVVSLDIDLTEKKAYLIDQGKLRLLRVNLDEMDSPLS 3063
Query: 151 ------------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
EG+A DW+ +Y L+ + I VC+ +G L +D I QP+ +
Sbjct: 3064 SYETVLRHNVYGTEGIAVDWVARKLYMLNRQERSIRVCELDGRFCKTLIRDRIQQPKAIA 3123
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNR-----STIISTKIYWPNGLTLDIATRRVY 253
+ P G +LF+T+W P I R+ +DGS + + WPN + +D + R++
Sbjct: 3124 VHPGKG--YLFFTEWSLQPYIGRMALDGSPELQDPIFKLAEHDLGWPNAIAIDYFSDRLF 3181
Query: 254 FADSKLDFI 262
+ D+ L+ I
Sbjct: 3182 WGDAHLNEI 3190
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 116/463 (25%), Positives = 170/463 (36%), Gaps = 95/463 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RCVN T CD K DC + +DE GC E G C + C C C
Sbjct: 3744 RCVNGTLACDRKDDCGDASDE-IGCSKHGGKTSCESFGNNGGCKHICTDITDSFYCHCRD 3802
Query: 58 GEILSNDSVT-CQDMNECEQPGYCSQMCTNTKGSYICSCNEGY-----VLEYDNHTCKAI 111
G S C D++EC C+Q+C NTKGSY+C C+E Y V C+A
Sbjct: 3803 GFRPDPQSPKDCIDIDECAGNNTCTQLCLNTKGSYLCRCHEDYENNVVVGSMTGKDCRA- 3861
Query: 112 NHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN 171
AA ++I S++ L G + A + + G+A+D +YW+D
Sbjct: 3862 KGDAANVMIGADSSLVQLSLHGAGTNRHAAAKANDEDNDIIGIAFDPRKEMMYWIDGS-- 3919
Query: 172 RIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRST 231
E R +A N + G LD I+ GM
Sbjct: 3920 ------ERTIYRSAIANGNQSH-EGQKLD------------------IDFAGMG------ 3948
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
P + +D T ++ A D + + R +D +G
Sbjct: 3949 ------VVPTAIAVDYTTGNLFVAAVSEDI----------EIGMARKKRMSEPVDNQNSG 3992
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
I A DG +V+G L + AL T + ++D G + +IE
Sbjct: 3993 F---IFVALPDGRYLKKIVAGHLQQPTAL---------ITAPTAGRICYSDAGLHAKIEC 4040
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIA-TRRVYFADSKLDFIDFCNYDGTGRQQVI---- 406
MDG++R I+ ++ P + +D RVY+ D K +D N DGT R V+
Sbjct: 4041 ADMDGTHRQIIVKDLVFSPTSMAIDEGKNNRVYWVDPKYRRVDAVNIDGTDRTTVVHDKN 4100
Query: 407 ---LIDLMVE------------FTNDLMGDNGVPALALDLENG 434
+D+ + D G V LA DLE+G
Sbjct: 4101 IPYAVDVFENHIYWLSRESKTLYVQDKFGRGRVSVLASDLEDG 4143
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 18/193 (9%)
Query: 151 VEGLAYDWIGGHIYWL--DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
++ +A DWI ++Y++ D+ IEV +GT R +L P + +DP R+L
Sbjct: 1895 IKSIAIDWINYNMYFINHDAERTNIEVSKLDGTYRKILLTTKTETPSSIAVDPI--GRYL 1952
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI------ 262
+W D G+ P I+R +DGS R I+ST I P L +D+A+R +Y++D+K+D I
Sbjct: 1953 YWADQGQKPSIQRSFLDGSRREVIVSTGIGEPTDLVVDVASRMIYWSDAKMDGIFRVRST 2012
Query: 263 ----DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
+ +I + + + +YW D K+ +A + S+L+S A
Sbjct: 2013 GGSPELVRADIASAAGVALHGQNMYWTDNRLE----KLFRATSKPNQTSLLLSPTTVAAS 2068
Query: 319 ALDLENGMLYYST 331
D+ + ++ ST
Sbjct: 2069 MKDIGDVAVFSST 2081
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 130/326 (39%), Gaps = 37/326 (11%)
Query: 80 CSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH 138
CS +C N K SY C C G L+ TC ++ + FL+I + ++ ++ + +
Sbjct: 1446 CSHICLLNNKNSYTCKCPMGQKLDGSGKTC--VDDAKPFLVIIQKTNVFGVEMNQAAANE 1503
Query: 139 R---AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
A + +SGL + YD + I+ L+ + + + I + N
Sbjct: 1504 TPILAGMVPLSGLGNAFDVTYDALSEEIFILEHTNHAKTLAQITTDSAIYRSTVNGGNKT 1563
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
M P + DW N R +G S IIST+ R V +
Sbjct: 1564 KMFSSAVPDDSYCLGFDW--NGRNLVVGNKVSQTIEIISTR---------GKQYRSVILS 1612
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ + + I + + +F W+D GG K+ +A +DGSN ++ S L
Sbjct: 1613 NDQSPTAVVAPVSIAVDADKGYVF----WLDRGGGASDAKVARAGLDGSNPLVIASNDLA 1668
Query: 316 E--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
E +ALD N +Y+S K RI + DG +R ++S PNGL
Sbjct: 1669 ELDHIALDTTNQRVYFSEAKAG------------RISSVTYDGQDRHYVLSDGGRQPNGL 1716
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDG 399
R+++ADS D I+ +G
Sbjct: 1717 AF--HGDRLFYADSAFDSIEVATING 1740
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 13/157 (8%)
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
SL IK+ + I +Y+I+ +++ K +DG+ IL++ + ++ ++
Sbjct: 1892 SLTIKS-IAIDWINYNMYFINHDAERTNIEVSK--LDGTYRKILLTTKTETPSSIAVD-- 1946
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
R+L+W D G+ P I+R +DGS R I+ST I P L +D+A+R +Y++
Sbjct: 1947 -------PIGRYLYWADQGQKPSIQRSFLDGSRREVIVSTGIGEPTDLVVDVASRMIYWS 1999
Query: 386 DSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
D+K+D I G G +++ D+ L G N
Sbjct: 2000 DAKMDGIFRVRSTG-GSPELVRADIASAAGVALHGQN 2035
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 47/187 (25%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
+ + DW+ IY+ R ++ D G + +A + T + +DP G LFW
Sbjct: 2221 ISDMKLDWLTQKIYFTTGRGGKVMAIDTAGEHLSTIASGDWTY--ALAIDPCSG--LLFW 2276
Query: 211 TDWGEN-------PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+D G PRIER + G NR I+S I P +T+D + +Y+AD
Sbjct: 2277 SDSGYKTSGGLYEPRIERSNLAGGNRKVIVSESISLPAAITVDFRNQMIYWAD------- 2329
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
VN L I A+ +G N I+ SG Y A +LDL
Sbjct: 2330 ---------VNR------------------LNIEVADYNGENRKIIASG--YRAKSLDLW 2360
Query: 324 NGMLYYS 330
+ LY S
Sbjct: 2361 DRWLYMS 2367
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 82/183 (44%), Gaps = 37/183 (20%)
Query: 242 GLTLDIATRRVYFAD-----------------SKLDFIDCKSLEIKTNVNYSTIFRKLYW 284
G+ D R++++ D S++ + KSL + I LY
Sbjct: 118 GIDFDYGDRKIFWTDRLAHSAFSADVDDEGEISQIKKLSLKSLVYPRCLAVDWITNTLYI 177
Query: 285 IDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL--ALDLENGMLYYSTLKCTRWLFWTD 342
I+ G +I ++ DG ++L++ L L ALD G ++++
Sbjct: 178 IESGSR----RIDVSSYDGDRRTVLLADGLTLPLDIALDPLRGEMFFTN----------- 222
Query: 343 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
+IE MDG+NR T++ST + +G+ +DI +R+Y+ D K+D ++ +Y G R
Sbjct: 223 ---QLKIEAAAMDGTNRRTLVSTHTHQVSGIVVDITAKRIYWVDPKVDRLESIDYQGNDR 279
Query: 403 QQV 405
+ V
Sbjct: 280 RIV 282
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 39/196 (19%)
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
R+ F +K K + +++ + +K+Y+ G G + I A G + S +
Sbjct: 2204 RLVFGATKQPHA--KEIRHISDMKLDWLTQKIYFT-TGRGGKVMAIDTA---GEHLSTIA 2257
Query: 311 SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN-------PRIERIGMDGSNRSTII 363
SG ALA+D C+ LFW+D G PRIER + G NR I+
Sbjct: 2258 SGDWTYALAID-----------PCSGLLFWSDSGYKTSGGLYEPRIERSNLAGGNRKVIV 2306
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNG 423
S I P +T+D + +Y+AD I+ +Y+G R+ + +G
Sbjct: 2307 SESISLPAAITVDFRNQMIYWADVNRLNIEVADYNGENRKIIA---------------SG 2351
Query: 424 VPALALDLENGMLYYS 439
A +LDL + LY S
Sbjct: 2352 YRAKSLDLWDRWLYMS 2367
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 337 WLFWTDWG---ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
++FW D G + ++ R G+DGSN I S + + + LD +RVYF+++K I
Sbjct: 1634 YVFWLDRGGGASDAKVARAGLDGSNPLVIASNDLAELDHIALDTTNQRVYFSEAKAGRIS 1693
Query: 394 FCNYDGTGRQQVI 406
YDG R V+
Sbjct: 1694 SVTYDGQDRHYVL 1706
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 68/138 (49%), Gaps = 9/138 (6%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI----VLAKDNITQ-- 193
A ++V+ D + +++DWI +Y++D+ N +EV T + ++ + +T+
Sbjct: 478 AAPVLVTHNDGLFSMSFDWISKQLYYVDNIRNSLEVVKIGETGLVHPDELVRRQLLTELR 537
Query: 194 -PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P +++ P G LF+ + I + +DG+N I +T + P+ + +D A R+
Sbjct: 538 DPVSVVIHPWKG--LLFYAEAMRPAAIYKCHIDGTNCQVIRNTTLGRPSEMAIDFADNRL 595
Query: 253 YFADSKLDFIDCKSLEIK 270
+ D+ L I C + K
Sbjct: 596 CWGDTLLKTISCMDFDGK 613
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 272 NVNYSTIFRKLYWIDEGGNGVPL-KIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
++++ I ++LY++D N + + KIG+ + + LV QL L + + +
Sbjct: 491 SMSFDWISKQLYYVDNIRNSLEVVKIGETGL--VHPDELVRRQLLTELRDPVSVVIHPWK 548
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 390
L LF+ + I + +DG+N I +T + P+ + +D A R+ + D+ L
Sbjct: 549 GL-----LFYAEAMRPAAIYKCHIDGTNCQVIRNTTLGRPSEMAIDFADNRLCWGDTLLK 603
Query: 391 FIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYY 438
I ++DG + V +D+ DN +P +A+ + N +YY
Sbjct: 604 TISCMDFDG---KNVAKLDI----------DNPIP-VAITIMNEYIYY 637
>gi|62630220|gb|AAX88965.1| unknown [Homo sapiens]
Length = 3881
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 164/301 (54%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCDG DCPNG DE P C+ C G C++ C P GA C CP G +L+ND
Sbjct: 551 CVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHECVQEPFGAKCLCPLGFLLAND 610
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++EC+ G CSQ C N +GS+ CSC+ GY+LE D TCK + L++++++
Sbjct: 611 SKTCEDIDECDILGSCSQHCYNMRGSFRCSCDTGYMLESDGRTCKVTASESLLLLVASQN 670
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+ + + G D R
Sbjct: 671 KIIADSVTSQVHNIYSLVENGSYIVAVDFDSISGRIFWSDATQGKTWSAFQNGTDRRV-- 728
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ S + L E +A DW+G ++YW D L IEV +G++R VL N+T PRG+ LDP
Sbjct: 729 VFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKNLTNPRGLALDPR 788
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
LFW+DWG +PRIER MDGS R+ I+ KI+WP GLT+D R +YF DS LD++
Sbjct: 789 MNEHLLFWSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYM 848
Query: 263 D 263
D
Sbjct: 849 D 849
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 181/410 (44%), Gaps = 96/410 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ + K+C+ DC + +DE GC + EC C + C T C+C PG L
Sbjct: 2312 RCIEMMKLCNHLDDCLDNSDEK-GCGINECHDPSISGCDHNCTDTLTSFYCSCRPGYKLM 2370
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P CSQ C N GSYIC C GY+ E D TC+ ++ +LI S
Sbjct: 2371 SDKRTCVDIDECTEMPFVCSQKCENVIGSYICKCAPGYLREPDGKTCRQNSNIEPYLIFS 2430
Query: 122 NRH--------------------SILVADLEEKGK------------------DHRAQDI 143
NR+ +++ D + K + I
Sbjct: 2431 NRYYLRNLTIDGYFYSLILEGLDNVVALDFDRVEKRLYWIDTQRQVIERMFLNKTNKETI 2490
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPR 195
+ L E LA DW+ +YWLD+RL+ + V D NG +R +LA+ + PR
Sbjct: 2491 INHRLPAAESLAVDWVSRKLYWLDARLDGLFVSDLNGGHRRMLAQHCVDANNTFCFDNPR 2550
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G+ L P G +L+W DWG I R+GMDG+N+S IISTK+ WPNG+T+D +Y+A
Sbjct: 2551 GLALHPQYG--YLYWADWGHRAYIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWA 2608
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ L +I+ LE G + + G L
Sbjct: 2609 DAHLGYIEYSDLE----------------------------------GHHRHTVYDGALP 2634
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ + +Y WTDW + DGSNR T+++T
Sbjct: 2635 HPFAITIFEDTIY-----------WTDWNTRTVEKGNKYDGSNRQTLVNT 2673
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 142/320 (44%), Gaps = 63/320 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLA-ECKHKFGLCSNTCHPTPLGA-LCTCPPG-EI 60
C+ VCD DC + +DE GC+ E +C C G +C+C G E
Sbjct: 3165 HCIPHDNVCDDADDCGDWSDE-LGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFET 3223
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN--HTCKAINHSAAFL 118
D +C D+NECEQ G C Q C NTKGSY C C +G+ D C A S L
Sbjct: 3224 NVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAAEGSSPLLL 3283
Query: 119 IISN-----------RHSILVADLE----------------------------------- 132
+ N R S + D E
Sbjct: 3284 LPDNVRIRKYNLSSERFSEYLQDEEYIQAVDYDWDPKDIGLSVVYYTVRGEGSRFGAIKR 3343
Query: 133 ------EKGKDHRAQ--DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
E G+++ Q D+ + + +G+A DW+G HIYW D + RIEV +G R
Sbjct: 3344 AYIPNFESGRNNLVQEVDLKLKYVMQPDGIAVDWVGRHIYWSDVKNKRIEVAKLDGRYRK 3403
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L ++ QP + ++P G +FWTDWG+ P+IE M+G +R+ ++ + WP GL+
Sbjct: 3404 WLISTDLDQPAAIAVNPKLGL--MFWTDWGKEPKIESAWMNGEDRNILVFEDLGWPTGLS 3461
Query: 245 LD-IATRRVYFADSKLDFID 263
+D + R+Y++D K D I+
Sbjct: 3462 IDYLNNDRIYWSDFKEDVIE 3481
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 114/253 (45%), Gaps = 61/253 (24%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G+ L DN +C N +F+++S + HS
Sbjct: 1255 CQQICLPVPGGLFSCACATGFKLNPDNRSCSPYN---SFIVVSMLSAIRGFSLELSDHSE 1311
Query: 127 LVADLEEKGKDHRAQDIVVS-------------------------------------GLD 149
+ + +G++ D+ VS G +
Sbjct: 1312 TMVPVAGQGRNALHVDVDVSSGFIYWCDFSSSVASDNAIRRIKPDGSSLMNIVTHGIGEN 1371
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ G++Y+ ++ ++ IEV N T R VL K + PR +++DP R+
Sbjct: 1372 GVRGIAVDWVAGNLYFTNAFVSETLIEVLRINTTYRRVLLKVTVDMPRHIVVDPK--NRY 1429
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
LFW D+G+ P+IER +D +NR+ ++S I P GL +D + VY+ D LD I
Sbjct: 1430 LFWADYGQRPKIERSFLDCTNRTVLVSEGIVTPRGLAVDRSDGYVYWVDDSLDII----A 1485
Query: 268 EIKTNVNYSTIFR 280
I+ N S + R
Sbjct: 1486 RIRINGENSEVIR 1498
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 75/125 (60%), Gaps = 4/125 (3%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ SG+ +G+A+DWI IY+ D I E+G+NR V+A+ + +PR ++LDP
Sbjct: 1686 VIASGIGTADGIAFDWITRRIYYSDYLNQMINSMAEDGSNRTVIAR--VPKPRAIVLDPC 1743
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W DW + +IER + G+ R I+++ + P+GLTLD +Y+ D+ L I
Sbjct: 1744 QG--YLYWADWDTHAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRI 1801
Query: 263 DCKSL 267
+ +L
Sbjct: 1802 ERSTL 1806
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 93/185 (50%), Gaps = 18/185 (9%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDP 201
+ + ++ VE LA+DWI ++YW DS I V + T R V+ + PR +++ P
Sbjct: 4 LAANRVENVESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTVVQY--LNNPRSVVVHP 61
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +LF+TDW +I R DGS+ +I+T + WPNGL +D A R+Y+ D+ D
Sbjct: 62 FAG--YLFFTDWFRPAKIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRLYWVDAYFDK 119
Query: 262 IDCKS-----------LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
I+ + +E T+ IF + + + G +++ KA DG +++
Sbjct: 120 IEHSTFDGLDRRRLGHIEQMTHPFGLAIFGEHLFFTDWRLGAIIRVRKA--DGGEMTVIR 177
Query: 311 SGQLY 315
SG Y
Sbjct: 178 SGIAY 182
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 111/457 (24%), Positives = 178/457 (38%), Gaps = 106/457 (23%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT-----CPP 57
+RC+ +VC+G DC +G DE C+ PTP CT C
Sbjct: 3120 NRCIYSHEVCNGVDDCGDGTDETE----EHCRK----------PTP--KPCTEYEYKCGN 3163
Query: 58 GEILSNDSVTCQDMNECEQ----------------PGYCSQMCTN-TKGSYICSCNEGYV 100
G + +D+V C D ++C C Q CT +G +ICSC G+
Sbjct: 3164 GHCIPHDNV-CDDADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFE 3222
Query: 101 LE-YDNHTCKAINHSAAFLIISNR-------HSILVADLEEKGKDHRAQDIVVSGLDLVE 152
+D +C IN F + + AD D + G +
Sbjct: 3223 TNVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAAEGSSPLL 3282
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
L D + Y L S + DE + A D P+ + G +++T
Sbjct: 3283 LLP-DNVRIRKYNLSSERFSEYLQDE----EYIQAVDYDWDPKDI------GLSVVYYTV 3331
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK-- 270
GE R I + Y PN F + + + L++K
Sbjct: 3332 RGEGSRFGAI------------KRAYIPN------------FESGRNNLVQEVDLKLKYV 3367
Query: 271 ---TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENG 325
+ + R +YW D +I A +DG L+S L + A+A++ + G
Sbjct: 3368 MQPDGIAVDWVGRHIYWSDVKNK----RIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLG 3423
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYF 384
++ FWTDWG+ P+IE M+G +R+ ++ + WP GL++D + R+Y+
Sbjct: 3424 LM-----------FWTDWGKEPKIESAWMNGEDRNILVFEDLGWPTGLSIDYLNNDRIYW 3472
Query: 385 ADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+D K D I+ YDGT R +VI + M ++ D+ D
Sbjct: 3473 SDFKEDVIETIKYDGTDR-RVIAKEAMNPYSLDIFED 3508
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
+LF+TDW +I R DGS+ +I+T + WPNGL +D A R+Y+ D+ D I+
Sbjct: 65 YLFFTDWFRPAKIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRLYWVDAYFDKIEHST 124
Query: 397 YDGTGRQQVILIDLMVE 413
+DG R+++ I+ M
Sbjct: 125 FDGLDRRRLGHIEQMTH 141
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 45/181 (24%)
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
G + T+I++ I +G+ D TRR+Y++D ++
Sbjct: 1680 GIHTPTVIASGIGTADGIAFDWITRRIYYSD---------------------------YL 1712
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
++ I DGSN +++ A+ LD C +L+W DW
Sbjct: 1713 NQ-------MINSMAEDGSNRTVIARVPKPRAIVLD-----------PCQGYLYWADWDT 1754
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+ +IER + G+ R I+++ + P+GLTLD +Y+ D+ L I+ G R+ +
Sbjct: 1755 HAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRIERSTLTGVDREVI 1814
Query: 406 I 406
+
Sbjct: 1815 V 1815
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 50/238 (21%)
Query: 213 WGENP-RIERIGMDGSNRSTIISTKIYWPN-GLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DG+NR+ S + P+ L LD +R +Y + + +S+E+
Sbjct: 1020 WVENPGEIHRVKTDGTNRTVFASISMVGPSMNLALDWISRNLYSTNPRT-----QSIEVL 1074
Query: 271 TNVNYSTIFRKLYWIDEGGN-GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
T ++ +RK ++G GV IG + +D G LY+
Sbjct: 1075 T-LHGDIRYRKTLIANDGTALGVGFPIG--------------------ITVDPARGKLYW 1113
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
S TD G +I MDG++ T+ + + +TLDI +++Y+A +
Sbjct: 1114 SDQG-------TDSGVPAKIASANMDGTSVKTLFTGNLEHLECVTLDIEEQKLYWAVTGR 1166
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I+ N DGT R +IL+ + + + + LYY+ E E ++
Sbjct: 1167 GVIERGNVDGTDR--MILVHQLSH------------PWGIAVHDSFLYYTDEQYEVIE 1210
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 56/219 (25%)
Query: 131 LEEKGKDHRAQD-----IVVSGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
+E G+ HR + V + + +V LA DWI ++Y + R IEV +G
Sbjct: 1021 VENPGEIHRVKTDGTNRTVFASISMVGPSMNLALDWISRNLYSTNPRTQSIEVLTLHGDI 1080
Query: 183 R---IVLAKDN----ITQPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRST 231
R ++A D + P G+ +DP+ G L+W+D G + +I MDG++ T
Sbjct: 1081 RYRKTLIANDGTALGVGFPIGITVDPARGK--LYWSDQGTDSGVPAKIASANMDGTSVKT 1138
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+ + + +TLDI +++Y+A + G G
Sbjct: 1139 LFTGNLEHLECVTLDIEEQKLYWAVT-------------------------------GRG 1167
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
V I + N+DG++ ILV QL + + + LYY+
Sbjct: 1168 V---IERGNVDGTDRMILVH-QLSHPWGIAVHDSFLYYT 1202
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 130/314 (41%), Gaps = 44/314 (14%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNITQ-PRGMMLDPSPGTRWLFW 210
GL D+ +Y++DS L+ ++ CD NG + R V+A D I + P + L ++W
Sbjct: 828 GLTIDYPNRLLYFMDSYLDYMDFCDYNGHHRRQVIASDLIIRHPYALTLFEDS----VYW 883
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
TD + G N+S ++ I WP G+ + + + + + F C L +
Sbjct: 884 TDRATRRVMRANKWHGGNQSVVM-YNIQWPLGI-VAVHPSKQPNSVNPCAFSRCSHLCLL 941
Query: 271 TNVN---YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE---- 323
++ YS + G + + D I V + ++L+ E
Sbjct: 942 SSQGPHFYSCVC-------PSGWSLSPDLLNCLRDDQPFLITVRQHIIFGISLNPEVKSN 994
Query: 324 NGMLYYSTLK---------CTRWLFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPN-G 372
+ M+ + ++ ++++W ENP I R+ DG+NR+ S + P+
Sbjct: 995 DAMVPIAGIQNGLDVEFDDAEQYIYWV---ENPGEIHRVKTDGTNRTVFASISMVGPSMN 1051
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND--LMGDNGVPALALD 430
L LD +R +Y + + I+ G R + LI ND +G + +D
Sbjct: 1052 LALDWISRNLYSTNPRTQSIEVLTLHGDIRYRKTLI------ANDGTALGVGFPIGITVD 1105
Query: 431 LENGMLYYSTEGAE 444
G LY+S +G +
Sbjct: 1106 PARGKLYWSDQGTD 1119
>gi|397507745|ref|XP_003824348.1| PREDICTED: low-density lipoprotein receptor-related protein 2 [Pan
paniscus]
Length = 4655
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 164/301 (54%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCDG DCPNG DE P C+ C G C++ C P GA C CP G +L+ND
Sbjct: 1325 CVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHECVQEPFGAKCLCPLGFLLAND 1384
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++EC+ G CSQ C N +GS+ CSC+ GY+LE D TCK + L++++++
Sbjct: 1385 SKTCEDIDECDILGSCSQHCYNMRGSFRCSCDTGYMLESDGRTCKVTASESLLLLVASQN 1444
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+ + + G D R
Sbjct: 1445 KIIADSVTSQVHNIYSLVENGSYIVAVDFDSISGRIFWSDATQGKTWSAFQNGTDRRV-- 1502
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ S + L E +A DW+G ++YW D L IEV +G++R VL N+T PRG+ LDP
Sbjct: 1503 VFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKNLTNPRGLALDPR 1562
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
LFW+DWG +PRIER MDGS R+ I+ KI+WP GLT+D R +YF DS LD++
Sbjct: 1563 MNEHLLFWSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYM 1622
Query: 263 D 263
D
Sbjct: 1623 D 1623
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 178/353 (50%), Gaps = 69/353 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
RC+++ KVCDG DCP DE G C + C C CH TP G C CPPG
Sbjct: 278 RCISIYKVCDGILDCPGREDENNTSTGKYCSMTLCSALN--CQYQCHETPYGGACFCPPG 335
Query: 59 EILS-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I++ NDS TC + ++C+ G C Q C + G ++C C EGY+LE + + A
Sbjct: 336 YIINHNDSRTCVEFDDCQIWGICDQKCESRPGRHLCHCEEGYILERGQYCKANDSFGEAS 395
Query: 118 LIISNRHSILVADLEEKGKDHR-------------------------------------- 139
+I SN +L+ D+ G+ R
Sbjct: 396 IIFSNGRDLLIGDIH--GRSFRILVESQNRGVAVGVAFHYHLQRVFWTDTVQNKVFSVDI 453
Query: 140 ----AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
Q+++ ++ E LA DW+ IY +++++NRI++ + +G+ R+ L +N+ PR
Sbjct: 454 NGLNIQEVLNVSVETPENLAVDWVNNKIYLVETKVNRIDMVNLDGSYRVTLITENLGHPR 513
Query: 196 GMMLDPSPGTRWLFWTDW----GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
G+ +DP+ G +LF++DW GE P++ER MDGSNR ++ TK+ WP G+TLD+ ++R
Sbjct: 514 GIAVDPTVG--YLFFSDWESLSGE-PKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKR 570
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
VY+ DS+ D+I+ V Y I RK + GG+ +P G + +G
Sbjct: 571 VYWVDSRFDYIE--------TVTYDGIQRKT--VVHGGSLIPHPFGISLFEGQ 613
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 181/410 (44%), Gaps = 96/410 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ + K+C+ DC + +DE GC + EC C + C T C+C PG L
Sbjct: 3086 RCIEMMKLCNHLDDCLDNSDE-KGCGINECHDPSISGCDHNCTDTLTSFYCSCRPGYKLM 3144
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P CSQ C N GSYIC C GY+ E D TC+ ++ +LI S
Sbjct: 3145 SDKRTCVDIDECTEMPFVCSQKCENVIGSYICKCAPGYLREPDGKTCRQNSNIEPYLIFS 3204
Query: 122 NRH--------------------SILVADLEEKGK------------------DHRAQDI 143
NR+ +++ D + K + I
Sbjct: 3205 NRYYLRNLTIDGYFYSLILEGLGNVVALDFDRVEKRLYWIDTQRQVIERMFLNKTNKETI 3264
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPR 195
+ L E LA DW+ +YWLD+RL+ + V D NG +R +LA+ + PR
Sbjct: 3265 INHRLPAAESLAVDWVSRKLYWLDARLDGLFVSDLNGGHRRMLAQHCVDANNTFCFDNPR 3324
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G+ L P G +++W DWG I R+GMDG+N+S IISTK+ WPNG+T+D +Y+A
Sbjct: 3325 GLALHPQYG--YIYWADWGHRAYIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWA 3382
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ L +I+ LE G + + G L
Sbjct: 3383 DAHLGYIEYSDLE----------------------------------GHHRHTVYDGALP 3408
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ + +Y WTDW + DGSNR T+++T
Sbjct: 3409 HPFAITIFEDTIY-----------WTDWNTRTVEKGNKYDGSNRQTLVNT 3447
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 142/320 (44%), Gaps = 63/320 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLA-ECKHKFGLCSNTCHPTPLGA-LCTCPPG-EI 60
C+ VCD DC + +DE GC+ E +C C G +C+C G E
Sbjct: 3939 HCIPHDNVCDDADDCGDWSDE-LGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFET 3997
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN--HTCKAINHSAAFL 118
D +C D+NECEQ G C Q C NTKGSY C C +G+ D C A S L
Sbjct: 3998 NVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAAEGSSPLLL 4057
Query: 119 IISN-----------RHSILVADLE----------------------------------- 132
+ N R S + D E
Sbjct: 4058 LPDNVRIRKYNLSSERFSEYLQDEEYIQAVDYDWDPEDIGLSVVYYTVRGEGSRFGAIKR 4117
Query: 133 ------EKGKDHRAQ--DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
E G+++ Q D+ + + +G+A DW+G HIYW D + RIEV +G R
Sbjct: 4118 AYIPNFESGRNNLVQEVDLKLKYVMQPDGIAVDWVGRHIYWSDVKNKRIEVAKLDGRYRK 4177
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L ++ QP + ++P G +FWTDWG+ P+IE M+G +R+ ++ + WP GL+
Sbjct: 4178 WLISTDLDQPAAIAVNPKLGL--MFWTDWGKEPKIESAWMNGEDRNILVFEDLGWPTGLS 4235
Query: 245 LD-IATRRVYFADSKLDFID 263
+D + R+Y++D K D I+
Sbjct: 4236 IDYLNNDRIYWSDFKEDVIE 4255
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 113/253 (44%), Gaps = 61/253 (24%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G+ L DN +C N +F+++S + HS
Sbjct: 2029 CQQICLPVPGGLFSCACATGFKLNPDNRSCSPYN---SFIVVSMLSAIRGFSLELSDHSE 2085
Query: 127 LVADLEEKGKDHRAQDIVVS-------------------------------------GLD 149
+ + +G++ D+ VS G +
Sbjct: 2086 TMVPVAGQGRNALHVDVDVSSGFIYWCDFSSSVASDNAIRRIKPDGSSLMNIVTHGIGEN 2145
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ G++Y ++ ++ IEV N T R VL K + PR +++DP R+
Sbjct: 2146 GVRGIAVDWVAGNLYLTNAFVSETLIEVLRINTTYRRVLLKVTVDMPRHIVVDPK--NRY 2203
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
LFW D+G+ P+IER +D +NR+ ++S I P GL +D + VY+ D LD I
Sbjct: 2204 LFWADYGQRPKIERSFLDCTNRTVLVSEGIVTPRGLAVDRSDGYVYWVDDSLDII----A 2259
Query: 268 EIKTNVNYSTIFR 280
I+ N S + R
Sbjct: 2260 RIRINGENSEVIR 2272
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ SG+ +G+A+DWI IY+ D I E+G+NR V+A+ + +PR ++LDP
Sbjct: 2460 VIASGIGTADGIAFDWITRRIYYSDYLNQTINSMAEDGSNRTVIAR--VPKPRAIVLDPC 2517
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W DW + +IER + G+ R +I+++ + P+GLTLD +Y+ D+ L I
Sbjct: 2518 QG--YLYWADWDTHAKIERATLGGNFRVSIVNSSLVMPSGLTLDYEEDLLYWVDASLQRI 2575
Query: 263 DCKSL 267
+ +L
Sbjct: 2576 ERSTL 2580
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 64/303 (21%)
Query: 68 CQDMNE-CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
C+D N CEQ S N + C C G+ L+ D C A+ + FLI S++ +I
Sbjct: 663 CKDNNGGCEQVCVLSHRTDNDGLGFRCKCTFGFQLDTDERHCIAVQN---FLIFSSQVAI 719
Query: 127 ----LVADLEEK-------------GKDHRAQDIVVSGLDL------------------- 150
+E G D AQD + D+
Sbjct: 720 RGIPFTLSTQEDVMVPVSGNPSFFVGIDFDAQDSTIFFSDMSKHMIFKQKIDGTGREILA 779
Query: 151 ------VEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSP 203
VE LA+DWI ++YW DS I V + T R V+ + PR +++ P
Sbjct: 780 ANRVENVESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTVVQY--LNNPRSVVVHPFA 837
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +LF+TDW +I R DGS+ +I+T + WPNGL +D A R+Y+ D+ D I+
Sbjct: 838 G--YLFFTDWFRPAKIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRLYWVDAYFDKIE 895
Query: 264 CKS-----------LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+ +E T+ IF + + + G +++ KA DG +++ SG
Sbjct: 896 HSTFDGLDRRRLGHIEQMTHPFGLAIFGEHLFFTDWRLGAIIRVRKA--DGGEMTVIRSG 953
Query: 313 QLY 315
Y
Sbjct: 954 IAY 956
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 111/457 (24%), Positives = 177/457 (38%), Gaps = 106/457 (23%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT-----CPP 57
+RC+ +VC+G DC +G DE C+ PTP CT C
Sbjct: 3894 NRCIYSHEVCNGVDDCGDGTDETE----EHCRK----------PTP--KPCTEYEYKCGN 3937
Query: 58 GEILSNDSVTCQDMNECEQ----------------PGYCSQMCTN-TKGSYICSCNEGYV 100
G + +D+V C D ++C C Q CT +G +ICSC G+
Sbjct: 3938 GHCIPHDNV-CDDADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFE 3996
Query: 101 LE-YDNHTCKAINHSAAFLIISNR-------HSILVADLEEKGKDHRAQDIVVSGLDLVE 152
+D +C IN F + + AD D + G +
Sbjct: 3997 TNVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAAEGSSPLL 4056
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
L D + Y L S + DE + A D P + G +++T
Sbjct: 4057 -LLPDNVRIRKYNLSSERFSEYLQDE----EYIQAVDYDWDPEDI------GLSVVYYTV 4105
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK-- 270
GE R I + Y PN F + + + L++K
Sbjct: 4106 RGEGSRFGAI------------KRAYIPN------------FESGRNNLVQEVDLKLKYV 4141
Query: 271 ---TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENG 325
+ + R +YW D +I A +DG L+S L + A+A++ + G
Sbjct: 4142 MQPDGIAVDWVGRHIYWSDVKNK----RIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLG 4197
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYF 384
++ FWTDWG+ P+IE M+G +R+ ++ + WP GL++D + R+Y+
Sbjct: 4198 LM-----------FWTDWGKEPKIESAWMNGEDRNILVFEDLGWPTGLSIDYLNNDRIYW 4246
Query: 385 ADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+D K D I+ YDGT R +VI + M ++ D+ D
Sbjct: 4247 SDFKEDVIETIKYDGTDR-RVIAKEAMNPYSLDIFED 4282
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 33/151 (21%)
Query: 296 IGKANMDGSNASILVSGQL--YEALALDLENGMLY-----YSTLKCTR------------ 336
I K +DG+ IL + ++ E+LA D + LY Y ++ R
Sbjct: 765 IFKQKIDGTGREILAANRVENVESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTVVQY 824
Query: 337 --------------WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+LF+TDW +I R DGS+ +I+T + WPNGL +D A R+
Sbjct: 825 LNNPRSVVVHPFAGYLFFTDWFRPAKIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRL 884
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
Y+ D+ D I+ +DG R+++ I+ M
Sbjct: 885 YWVDAYFDKIEHSTFDGLDRRRLGHIEQMTH 915
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 45/181 (24%)
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
G + T+I++ I +G+ D TRR+Y++D ++
Sbjct: 2454 GIHTPTVIASGIGTADGIAFDWITRRIYYSD---------------------------YL 2486
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
++ I DGSN +++ A+ LD C +L+W DW
Sbjct: 2487 NQ-------TINSMAEDGSNRTVIARVPKPRAIVLD-----------PCQGYLYWADWDT 2528
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+ +IER + G+ R +I+++ + P+GLTLD +Y+ D+ L I+ G R+ +
Sbjct: 2529 HAKIERATLGGNFRVSIVNSSLVMPSGLTLDYEEDLLYWVDASLQRIERSTLTGMDREVI 2588
Query: 406 I 406
+
Sbjct: 2589 V 2589
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 50/238 (21%)
Query: 213 WGENP-RIERIGMDGSNRSTIISTKIYWPN-GLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DG+NR+ S + P+ L LD +R +Y + + +S+E+
Sbjct: 1794 WVENPGEIHRVKTDGTNRTVFASISMVGPSMNLALDWISRNLYSTNPRT-----QSIEVL 1848
Query: 271 TNVNYSTIFRKLYWIDEGGN-GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
T ++ +RK ++G GV IG + +D G LY+
Sbjct: 1849 T-LHGDIRYRKTLIANDGTALGVGFPIG--------------------ITVDPARGKLYW 1887
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
S TD G +I MDG++ T+ + + +TLDI +++Y+A +
Sbjct: 1888 SDQG-------TDSGVPAKIASANMDGTSVKTLFTGNLEHLECVTLDIEEQKLYWAVTGR 1940
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I+ N DGT R +IL+ + + + + LYY+ E E ++
Sbjct: 1941 GVIERGNVDGTDR--MILVHQLSH------------PWGIAVHDSFLYYTDEQYEVIE 1984
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 56/219 (25%)
Query: 131 LEEKGKDHRAQD-----IVVSGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
+E G+ HR + V + + +V LA DWI ++Y + R IEV +G
Sbjct: 1795 VENPGEIHRVKTDGTNRTVFASISMVGPSMNLALDWISRNLYSTNPRTQSIEVLTLHGDI 1854
Query: 183 R---IVLAKDN----ITQPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRST 231
R ++A D + P G+ +DP+ G L+W+D G + +I MDG++ T
Sbjct: 1855 RYRKTLIANDGTALGVGFPIGITVDPARGK--LYWSDQGTDSGVPAKIASANMDGTSVKT 1912
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+ + + +TLDI +++Y+A + G G
Sbjct: 1913 LFTGNLEHLECVTLDIEEQKLYWAVT-------------------------------GRG 1941
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
V I + N+DG++ ILV QL + + + LYY+
Sbjct: 1942 V---IERGNVDGTDRMILVH-QLSHPWGIAVHDSFLYYT 1976
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 130/314 (41%), Gaps = 44/314 (14%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNITQ-PRGMMLDPSPGTRWLFW 210
GL D+ +Y++DS L+ ++ CD NG + R V+A D I + P + L ++W
Sbjct: 1602 GLTIDYPNRLLYFMDSYLDYMDFCDYNGHHRRQVIASDLIIRHPYALTLFEDS----VYW 1657
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
TD + G N+S ++ I WP G+ + + + + + F C L +
Sbjct: 1658 TDRATRRVMRANKWHGGNQSVVM-YNIQWPLGI-VAVHPSKQPNSVNPCAFSRCSHLCLL 1715
Query: 271 TNVN---YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE---- 323
++ YS + G + + D I V + ++L+ E
Sbjct: 1716 SSQGPHFYSCVC-------PSGWSLSPDLLNCLRDDQPFLITVRQHIIFGISLNPEVKSN 1768
Query: 324 NGMLYYSTLK---------CTRWLFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPN-G 372
+ M+ + ++ ++++W ENP I R+ DG+NR+ S + P+
Sbjct: 1769 DAMVPIAGIQNGLDVEFDDAEQYIYWV---ENPGEIHRVKTDGTNRTVFASISMVGPSMN 1825
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND--LMGDNGVPALALD 430
L LD +R +Y + + I+ G R + LI ND +G + +D
Sbjct: 1826 LALDWISRNLYSTNPRTQSIEVLTLHGDIRYRKTLI------ANDGTALGVGFPIGITVD 1879
Query: 431 LENGMLYYSTEGAE 444
G LY+S +G +
Sbjct: 1880 PARGKLYWSDQGTD 1893
>gi|114581572|ref|XP_515882.2| PREDICTED: low-density lipoprotein receptor-related protein 2 isoform
2 [Pan troglodytes]
Length = 4655
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 164/301 (54%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCDG DCPNG DE P C+ C G C++ C P GA C CP G +L+ND
Sbjct: 1325 CVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHECVQEPFGAKCLCPLGFLLAND 1384
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++EC+ G CSQ C N +GS+ CSC+ GY+LE D TCK + L++++++
Sbjct: 1385 SKTCEDIDECDILGSCSQHCYNMRGSFRCSCDTGYMLESDGRTCKVTASESLLLLVASQN 1444
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+ + + G D R
Sbjct: 1445 KIIADSVTSQVHNIYSLVENGSYIVAVDFDSISGRIFWSDATQGKTWSAFQNGTDRRV-- 1502
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ S + L E +A DW+G ++YW D L IEV +G++R VL N+T PRG+ LDP
Sbjct: 1503 VFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKNLTNPRGLALDPR 1562
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
LFW+DWG +PRIER MDGS R+ I+ KI+WP GLT+D R +YF DS LD++
Sbjct: 1563 MNEHLLFWSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYM 1622
Query: 263 D 263
D
Sbjct: 1623 D 1623
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 178/353 (50%), Gaps = 69/353 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
RC+++ KVCDG DCP DE G C + C C CH TP G C CPPG
Sbjct: 278 RCISIYKVCDGILDCPGREDENNTSTGKYCSMTLCSALN--CQYQCHETPYGGACFCPPG 335
Query: 59 EILS-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I++ NDS TC + ++C+ G C Q C + G ++C C EGY+LE + + A
Sbjct: 336 YIINHNDSRTCVEFDDCQIWGICDQKCESRPGRHLCHCEEGYILERGQYCKANDSFGEAS 395
Query: 118 LIISNRHSILVADLEEKGKDHR-------------------------------------- 139
+I SN +L+ D+ G+ R
Sbjct: 396 IIFSNGRDLLIGDIH--GRSFRILVESQNRGVAVGVAFHYHLQRVFWTDTVQNKVFSVDI 453
Query: 140 ----AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
Q+++ ++ E LA DW+ IY +++++NRI++ + +G+ R+ L +N+ PR
Sbjct: 454 NGLNIQEVLNVSVETPENLAVDWVNNKIYLVETKVNRIDMVNLDGSYRVTLITENLGHPR 513
Query: 196 GMMLDPSPGTRWLFWTDW----GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
G+ +DP+ G +LF++DW GE P++ER MDGSNR ++ TK+ WP G+TLD+ ++R
Sbjct: 514 GIAVDPTVG--YLFFSDWESLSGE-PKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKR 570
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
VY+ DS+ D+I+ V Y I RK + GG+ +P G + +G
Sbjct: 571 VYWVDSRFDYIE--------TVTYDGIQRKT--VVHGGSLIPHPFGISLFEGQ 613
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 181/410 (44%), Gaps = 96/410 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ + K+C+ DC + +DE GC + EC C + C T C+C PG L
Sbjct: 3086 RCIEMMKLCNHLDDCLDNSDE-KGCGINECHDPSISGCDHNCTDTLTSFYCSCRPGYKLM 3144
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P CSQ C N GSYIC C GY+ E D TC+ ++ +LI S
Sbjct: 3145 SDKRTCVDIDECTEMPFVCSQKCENVIGSYICKCAPGYLREPDGKTCRQNSNIEPYLIFS 3204
Query: 122 NRH--------------------SILVADLEEKGK------------------DHRAQDI 143
NR+ +++ D + K + I
Sbjct: 3205 NRYYLRNLTIDGYFYSLILEGLGNVVALDFDRVEKRLYWIDTQRQVIERMFLNKTNKETI 3264
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPR 195
+ L E LA DW+ +YWLD+RL+ + V D NG +R +LA+ + PR
Sbjct: 3265 INHRLPAAESLAVDWVSRKLYWLDARLDGLFVSDLNGGHRRMLAQHCVDANNTFCFDNPR 3324
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G+ L P G +++W DWG I R+GMDG+N+S IISTK+ WPNG+T+D +Y+A
Sbjct: 3325 GLALHPQYG--YIYWADWGHRAYIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWA 3382
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ L +I+ LE G + + G L
Sbjct: 3383 DAHLGYIEYSDLE----------------------------------GHHRHTVYDGALP 3408
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ + +Y WTDW + DGSNR T+++T
Sbjct: 3409 HPFAITIFEDTIY-----------WTDWNTRTVEKGNKYDGSNRQTLVNT 3447
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 142/320 (44%), Gaps = 63/320 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLA-ECKHKFGLCSNTCHPTPLGA-LCTCPPG-EI 60
C+ VCD DC + +DE GC+ E +C C G +C+C G E
Sbjct: 3939 HCIPHDNVCDDADDCGDWSDE-LGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFET 3997
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN--HTCKAINHSAAFL 118
D +C D+NECEQ G C Q C NTKGSY C C +G+ D C A S L
Sbjct: 3998 NVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAAEGSSPLLL 4057
Query: 119 IISN-----------RHSILVADLE----------------------------------- 132
+ N R S + D E
Sbjct: 4058 LPDNVRIRKYNLSSERFSEYLQDEEYIQAVDYDWDPEDIGLSVVYYTVRGEGSRFGAIKR 4117
Query: 133 ------EKGKDHRAQ--DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
E G+++ Q D+ + + +G+A DW+G HIYW D + RIEV +G R
Sbjct: 4118 AYIPNFESGRNNLVQEVDLKLKYVMQPDGIAVDWVGRHIYWSDVKNKRIEVAKLDGRYRK 4177
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L ++ QP + ++P G +FWTDWG+ P+IE M+G +R+ ++ + WP GL+
Sbjct: 4178 WLISTDLDQPAAIAVNPKLGL--MFWTDWGKEPKIESAWMNGEDRNILVFEDLGWPTGLS 4235
Query: 245 LD-IATRRVYFADSKLDFID 263
+D + R+Y++D K D I+
Sbjct: 4236 IDYLNNDRIYWSDFKEDVIE 4255
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 113/253 (44%), Gaps = 61/253 (24%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G+ L DN +C N +F+++S + HS
Sbjct: 2029 CQQICLPVPGGLFSCACATGFKLNPDNRSCSPYN---SFIVVSTLSAIRGFSLELSDHSE 2085
Query: 127 LVADLEEKGKDHRAQDIVVS-------------------------------------GLD 149
+ + +G++ D+ VS G +
Sbjct: 2086 TMVPVAGQGRNALHVDVDVSSGFIYWCDFSSSVASDNAIRRIKPDGSSLMNIVTHGIGEN 2145
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ G++Y ++ ++ IEV N T R VL K + PR +++DP R+
Sbjct: 2146 GVRGIAVDWVAGNLYLTNAFVSETLIEVLRINTTYRRVLLKVTVDMPRHIVVDPK--NRY 2203
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
LFW D+G+ P+IER +D +NR+ ++S I P GL +D + VY+ D LD I
Sbjct: 2204 LFWADYGQRPKIERSFLDCTNRTVLVSEGIVTPRGLAVDRSDGYVYWVDDSLDII----A 2259
Query: 268 EIKTNVNYSTIFR 280
I+ N S + R
Sbjct: 2260 RIRINGENSEVIR 2272
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ SG+ +G+A+DW+ IY+ D I E+G+NR V+A+ + +PR ++LDP
Sbjct: 2460 VIASGIGTADGIAFDWLTRRIYYSDYLNQTINSMAEDGSNRTVIAR--VPKPRAIVLDPC 2517
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W DW + +IER + G+ R +I+++ + P+GLTLD +Y+ D+ L I
Sbjct: 2518 QG--YLYWADWDTHAKIERATLGGNFRVSIVNSSLVMPSGLTLDYEEDLLYWVDASLQRI 2575
Query: 263 DCKSL 267
+ +L
Sbjct: 2576 ERSTL 2580
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 64/303 (21%)
Query: 68 CQDMNE-CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
C+D N CEQ S N + C C G+ L+ D C A+ + FLI S++ +I
Sbjct: 663 CKDNNGGCEQVCVLSHRTDNDGLGFRCKCTFGFQLDTDERHCIAVQN---FLIFSSQVAI 719
Query: 127 ----LVADLEEK-------------GKDHRAQDIVVSGLDL------------------- 150
+E G D AQD + D+
Sbjct: 720 RGIPFTLSTQEDVMVPVSGNPSFFVGIDFDAQDSTIFFSDMSKHMIFKQKIDGTGREILA 779
Query: 151 ------VEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSP 203
VE LA+DWI ++YW DS I V + T R V+ + PR +++ P
Sbjct: 780 ANRVENVESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTVVQY--LNNPRSVVVHPFA 837
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +LF+TDW +I R DGS+ +I+T + WPNGL +D A R+Y+ D+ D I+
Sbjct: 838 G--YLFFTDWFRPAKIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRLYWVDAYFDKIE 895
Query: 264 CKS-----------LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+ +E T+ IF + + + G +++ KA DG +++ SG
Sbjct: 896 HSTFDGLDRRRLGHIEQMTHPFGLAIFGEHLFFTDWRLGAIIRVRKA--DGGEMTVIRSG 953
Query: 313 QLY 315
Y
Sbjct: 954 IAY 956
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 111/457 (24%), Positives = 177/457 (38%), Gaps = 106/457 (23%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT-----CPP 57
+RC+ +VC+G DC +G DE C+ PTP CT C
Sbjct: 3894 NRCIYSHEVCNGVDDCGDGTDETE----EHCRK----------PTP--KPCTEYEYKCGN 3937
Query: 58 GEILSNDSVTCQDMNECEQ----------------PGYCSQMCTN-TKGSYICSCNEGYV 100
G + +D+V C D ++C C Q CT +G +ICSC G+
Sbjct: 3938 GHCIPHDNV-CDDADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFE 3996
Query: 101 LE-YDNHTCKAINHSAAFLIISNR-------HSILVADLEEKGKDHRAQDIVVSGLDLVE 152
+D +C IN F + + AD D + G +
Sbjct: 3997 TNVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAAEGSSPLL 4056
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
L D + Y L S + DE + A D P + G +++T
Sbjct: 4057 -LLPDNVRIRKYNLSSERFSEYLQDE----EYIQAVDYDWDPEDI------GLSVVYYTV 4105
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK-- 270
GE R I + Y PN F + + + L++K
Sbjct: 4106 RGEGSRFGAI------------KRAYIPN------------FESGRNNLVQEVDLKLKYV 4141
Query: 271 ---TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENG 325
+ + R +YW D +I A +DG L+S L + A+A++ + G
Sbjct: 4142 MQPDGIAVDWVGRHIYWSDVKNK----RIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLG 4197
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYF 384
++ FWTDWG+ P+IE M+G +R+ ++ + WP GL++D + R+Y+
Sbjct: 4198 LM-----------FWTDWGKEPKIESAWMNGEDRNILVFEDLGWPTGLSIDYLNNDRIYW 4246
Query: 385 ADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+D K D I+ YDGT R +VI + M ++ D+ D
Sbjct: 4247 SDFKEDVIETIKYDGTDR-RVIAKEAMNPYSLDIFED 4282
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 33/151 (21%)
Query: 296 IGKANMDGSNASILVSGQL--YEALALDLENGMLY-----YSTLKCTR------------ 336
I K +DG+ IL + ++ E+LA D + LY Y ++ R
Sbjct: 765 IFKQKIDGTGREILAANRVENVESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTVVQY 824
Query: 337 --------------WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+LF+TDW +I R DGS+ +I+T + WPNGL +D A R+
Sbjct: 825 LNNPRSVVVHPFAGYLFFTDWFRPAKIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRL 884
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
Y+ D+ D I+ +DG R+++ I+ M
Sbjct: 885 YWVDAYFDKIEHSTFDGLDRRRLGHIEQMTH 915
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 45/181 (24%)
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
G + T+I++ I +G+ D TRR+Y++D ++
Sbjct: 2454 GIHTPTVIASGIGTADGIAFDWLTRRIYYSD---------------------------YL 2486
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
++ I DGSN +++ A+ LD C +L+W DW
Sbjct: 2487 NQ-------TINSMAEDGSNRTVIARVPKPRAIVLD-----------PCQGYLYWADWDT 2528
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+ +IER + G+ R +I+++ + P+GLTLD +Y+ D+ L I+ G R+ +
Sbjct: 2529 HAKIERATLGGNFRVSIVNSSLVMPSGLTLDYEEDLLYWVDASLQRIERSTLTGMDREVI 2588
Query: 406 I 406
+
Sbjct: 2589 V 2589
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 50/238 (21%)
Query: 213 WGENP-RIERIGMDGSNRSTIISTKIYWPN-GLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DG+NR+ S + P+ L LD +R +Y + + +S+E+
Sbjct: 1794 WVENPGEIHRVKTDGTNRTVFASISMVGPSMNLALDWISRNLYSTNPRT-----QSIEVL 1848
Query: 271 TNVNYSTIFRKLYWIDEGGN-GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
T ++ +RK ++G GV IG + +D G LY+
Sbjct: 1849 T-LHGDIRYRKTLIANDGTALGVGFPIG--------------------ITVDPARGKLYW 1887
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
S TD G +I MDG++ T+ + + +TLDI +++Y+A +
Sbjct: 1888 SDQG-------TDSGVPAKIASANMDGTSVKTLFTGNLEHLECVTLDIEEQKLYWAVTGR 1940
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I+ N DGT R +IL+ + + + + LYY+ E E ++
Sbjct: 1941 GVIERGNVDGTDR--MILVHQLSH------------PWGIAVHDSFLYYTDEQYEVIE 1984
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 56/219 (25%)
Query: 131 LEEKGKDHRAQD-----IVVSGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
+E G+ HR + V + + +V LA DWI ++Y + R IEV +G
Sbjct: 1795 VENPGEIHRVKTDGTNRTVFASISMVGPSMNLALDWISRNLYSTNPRTQSIEVLTLHGDI 1854
Query: 183 R---IVLAKDN----ITQPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRST 231
R ++A D + P G+ +DP+ G L+W+D G + +I MDG++ T
Sbjct: 1855 RYRKTLIANDGTALGVGFPIGITVDPARGK--LYWSDQGTDSGVPAKIASANMDGTSVKT 1912
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+ + + +TLDI +++Y+A + G G
Sbjct: 1913 LFTGNLEHLECVTLDIEEQKLYWAVT-------------------------------GRG 1941
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
V I + N+DG++ ILV QL + + + LYY+
Sbjct: 1942 V---IERGNVDGTDRMILVH-QLSHPWGIAVHDSFLYYT 1976
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 130/314 (41%), Gaps = 44/314 (14%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNITQ-PRGMMLDPSPGTRWLFW 210
GL D+ +Y++DS L+ ++ CD NG + R V+A D I + P + L ++W
Sbjct: 1602 GLTIDYPNRLLYFMDSYLDYMDFCDYNGHHRRQVIASDLIIRHPYALTLFEDS----VYW 1657
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
TD + G N+S ++ I WP G+ + + + + + F C L +
Sbjct: 1658 TDRATRRVMRANKWHGGNQSVVM-YNIQWPLGI-VAVHPSKQPNSVNPCAFSRCSHLCLL 1715
Query: 271 TNVN---YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE---- 323
++ YS + G + + D I V + ++L+ E
Sbjct: 1716 SSQGPHFYSCVC-------PSGWSLSPDLLNCLRDDQPFLITVRQHIIFGISLNPEVKSN 1768
Query: 324 NGMLYYSTLK---------CTRWLFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPN-G 372
+ M+ + ++ ++++W ENP I R+ DG+NR+ S + P+
Sbjct: 1769 DAMVPIAGIQNGLDVEFDDAEQYIYWV---ENPGEIHRVKTDGTNRTVFASISMVGPSMN 1825
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND--LMGDNGVPALALD 430
L LD +R +Y + + I+ G R + LI ND +G + +D
Sbjct: 1826 LALDWISRNLYSTNPRTQSIEVLTLHGDIRYRKTLI------ANDGTALGVGFPIGITVD 1879
Query: 431 LENGMLYYSTEGAE 444
G LY+S +G +
Sbjct: 1880 PARGKLYWSDQGTD 1893
>gi|126012573|ref|NP_004516.2| low-density lipoprotein receptor-related protein 2 precursor [Homo
sapiens]
gi|160332309|sp|P98164.3|LRP2_HUMAN RecName: Full=Low-density lipoprotein receptor-related protein 2;
Short=LRP-2; AltName: Full=Glycoprotein 330; Short=gp330;
AltName: Full=Megalin; Flags: Precursor
Length = 4655
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 164/301 (54%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCDG DCPNG DE P C+ C G C++ C P GA C CP G +L+ND
Sbjct: 1325 CVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHECVQEPFGAKCLCPLGFLLAND 1384
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++EC+ G CSQ C N +GS+ CSC+ GY+LE D TCK + L++++++
Sbjct: 1385 SKTCEDIDECDILGSCSQHCYNMRGSFRCSCDTGYMLESDGRTCKVTASESLLLLVASQN 1444
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+ + + G D R
Sbjct: 1445 KIIADSVTSQVHNIYSLVENGSYIVAVDFDSISGRIFWSDATQGKTWSAFQNGTDRRV-- 1502
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ S + L E +A DW+G ++YW D L IEV +G++R VL N+T PRG+ LDP
Sbjct: 1503 VFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKNLTNPRGLALDPR 1562
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
LFW+DWG +PRIER MDGS R+ I+ KI+WP GLT+D R +YF DS LD++
Sbjct: 1563 MNEHLLFWSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYM 1622
Query: 263 D 263
D
Sbjct: 1623 D 1623
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 178/353 (50%), Gaps = 69/353 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
RC+++ KVCDG DCP DE G C + C C CH TP G C CPPG
Sbjct: 278 RCISIYKVCDGILDCPGREDENNTSTGKYCSMTLCSALN--CQYQCHETPYGGACFCPPG 335
Query: 59 EILS-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I++ NDS TC + ++C+ G C Q C + G ++C C EGY+LE + + A
Sbjct: 336 YIINHNDSRTCVEFDDCQIWGICDQKCESRPGRHLCHCEEGYILERGQYCKANDSFGEAS 395
Query: 118 LIISNRHSILVADLEEKGKDHR-------------------------------------- 139
+I SN +L+ D+ G+ R
Sbjct: 396 IIFSNGRDLLIGDIH--GRSFRILVESQNRGVAVGVAFHYHLQRVFWTDTVQNKVFSVDI 453
Query: 140 ----AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
Q+++ ++ E LA DW+ IY +++++NRI++ + +G+ R+ L +N+ PR
Sbjct: 454 NGLNIQEVLNVSVETPENLAVDWVNNKIYLVETKVNRIDMVNLDGSYRVTLITENLGHPR 513
Query: 196 GMMLDPSPGTRWLFWTDW----GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
G+ +DP+ G +LF++DW GE P++ER MDGSNR ++ TK+ WP G+TLD+ ++R
Sbjct: 514 GIAVDPTVG--YLFFSDWESLSGE-PKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKR 570
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
VY+ DS+ D+I+ V Y I RK + GG+ +P G + +G
Sbjct: 571 VYWVDSRFDYIE--------TVTYDGIQRKT--VVHGGSLIPHPFGVSLFEGQ 613
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 181/410 (44%), Gaps = 96/410 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ + K+C+ DC + +DE GC + EC C + C T C+C PG L
Sbjct: 3086 RCIEMMKLCNHLDDCLDNSDEK-GCGINECHDPSISGCDHNCTDTLTSFYCSCRPGYKLM 3144
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P CSQ C N GSYIC C GY+ E D TC+ ++ +LI S
Sbjct: 3145 SDKRTCVDIDECTEMPFVCSQKCENVIGSYICKCAPGYLREPDGKTCRQNSNIEPYLIFS 3204
Query: 122 NRH--------------------SILVADLEEKGK------------------DHRAQDI 143
NR+ +++ D + K + I
Sbjct: 3205 NRYYLRNLTIDGYFYSLILEGLDNVVALDFDRVEKRLYWIDTQRQVIERMFLNKTNKETI 3264
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPR 195
+ L E LA DW+ +YWLD+RL+ + V D NG +R +LA+ + PR
Sbjct: 3265 INHRLPAAESLAVDWVSRKLYWLDARLDGLFVSDLNGGHRRMLAQHCVDANNTFCFDNPR 3324
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G+ L P G +L+W DWG I R+GMDG+N+S IISTK+ WPNG+T+D +Y+A
Sbjct: 3325 GLALHPQYG--YLYWADWGHRAYIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWA 3382
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ L +I+ LE G + + G L
Sbjct: 3383 DAHLGYIEYSDLE----------------------------------GHHRHTVYDGALP 3408
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ + +Y WTDW + DGSNR T+++T
Sbjct: 3409 HPFAITIFEDTIY-----------WTDWNTRTVEKGNKYDGSNRQTLVNT 3447
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 142/320 (44%), Gaps = 63/320 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLA-ECKHKFGLCSNTCHPTPLGA-LCTCPPG-EI 60
C+ VCD DC + +DE GC+ E +C C G +C+C G E
Sbjct: 3939 HCIPHDNVCDDADDCGDWSDE-LGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFET 3997
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN--HTCKAINHSAAFL 118
D +C D+NECEQ G C Q C NTKGSY C C +G+ D C A S L
Sbjct: 3998 NVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAAEGSSPLLL 4057
Query: 119 IISN-----------RHSILVADLE----------------------------------- 132
+ N R S + D E
Sbjct: 4058 LPDNVRIRKYNLSSERFSEYLQDEEYIQAVDYDWDPKDIGLSVVYYTVRGEGSRFGAIKR 4117
Query: 133 ------EKGKDHRAQ--DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
E G+++ Q D+ + + +G+A DW+G HIYW D + RIEV +G R
Sbjct: 4118 AYIPNFESGRNNLVQEVDLKLKYVMQPDGIAVDWVGRHIYWSDVKNKRIEVAKLDGRYRK 4177
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L ++ QP + ++P G +FWTDWG+ P+IE M+G +R+ ++ + WP GL+
Sbjct: 4178 WLISTDLDQPAAIAVNPKLGL--MFWTDWGKEPKIESAWMNGEDRNILVFEDLGWPTGLS 4235
Query: 245 LD-IATRRVYFADSKLDFID 263
+D + R+Y++D K D I+
Sbjct: 4236 IDYLNNDRIYWSDFKEDVIE 4255
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 114/253 (45%), Gaps = 61/253 (24%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G+ L DN +C N +F+++S + HS
Sbjct: 2029 CQQICLPVPGGLFSCACATGFKLNPDNRSCSPYN---SFIVVSMLSAIRGFSLELSDHSE 2085
Query: 127 LVADLEEKGKDHRAQDIVVS-------------------------------------GLD 149
+ + +G++ D+ VS G +
Sbjct: 2086 TMVPVAGQGRNALHVDVDVSSGFIYWCDFSSSVASDNAIRRIKPDGSSLMNIVTHGIGEN 2145
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ G++Y+ ++ ++ IEV N T R VL K + PR +++DP R+
Sbjct: 2146 GVRGIAVDWVAGNLYFTNAFVSETLIEVLRINTTYRRVLLKVTVDMPRHIVVDPK--NRY 2203
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
LFW D+G+ P+IER +D +NR+ ++S I P GL +D + VY+ D LD I
Sbjct: 2204 LFWADYGQRPKIERSFLDCTNRTVLVSEGIVTPRGLAVDRSDGYVYWVDDSLDII----A 2259
Query: 268 EIKTNVNYSTIFR 280
I+ N S + R
Sbjct: 2260 RIRINGENSEVIR 2272
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 75/125 (60%), Gaps = 4/125 (3%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ SG+ +G+A+DWI IY+ D I E+G+NR V+A+ + +PR ++LDP
Sbjct: 2460 VIASGIGTADGIAFDWITRRIYYSDYLNQMINSMAEDGSNRTVIAR--VPKPRAIVLDPC 2517
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W DW + +IER + G+ R I+++ + P+GLTLD +Y+ D+ L I
Sbjct: 2518 QG--YLYWADWDTHAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRI 2575
Query: 263 DCKSL 267
+ +L
Sbjct: 2576 ERSTL 2580
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 64/303 (21%)
Query: 68 CQDMNE-CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
C+D N CEQ S N + C C G+ L+ D C A+ + FLI S++ +I
Sbjct: 663 CKDNNGGCEQVCVLSHRTDNDGLGFRCKCTFGFQLDTDERHCIAVQN---FLIFSSQVAI 719
Query: 127 ----LVADLEEK-------------GKDHRAQDIVVSGLDL------------------- 150
+E G D AQD + D+
Sbjct: 720 RGIPFTLSTQEDVMVPVSGNPSFFVGIDFDAQDSTIFFSDMSKHMIFKQKIDGTGREILA 779
Query: 151 ------VEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSP 203
VE LA+DWI ++YW DS I V + T R V+ + PR +++ P
Sbjct: 780 ANRVENVESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTVVQY--LNNPRSVVVHPFA 837
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +LF+TDW +I R DGS+ +I+T + WPNGL +D A R+Y+ D+ D I+
Sbjct: 838 G--YLFFTDWFRPAKIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRLYWVDAYFDKIE 895
Query: 264 CKS-----------LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+ +E T+ IF + + + G +++ KA DG +++ SG
Sbjct: 896 HSTFDGLDRRRLGHIEQMTHPFGLAIFGEHLFFTDWRLGAIIRVRKA--DGGEMTVIRSG 953
Query: 313 QLY 315
Y
Sbjct: 954 IAY 956
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 111/457 (24%), Positives = 178/457 (38%), Gaps = 106/457 (23%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT-----CPP 57
+RC+ +VC+G DC +G DE C+ PTP CT C
Sbjct: 3894 NRCIYSHEVCNGVDDCGDGTDETE----EHCRK----------PTP--KPCTEYEYKCGN 3937
Query: 58 GEILSNDSVTCQDMNECEQ----------------PGYCSQMCTN-TKGSYICSCNEGYV 100
G + +D+V C D ++C C Q CT +G +ICSC G+
Sbjct: 3938 GHCIPHDNV-CDDADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFE 3996
Query: 101 LE-YDNHTCKAINHSAAFLIISNR-------HSILVADLEEKGKDHRAQDIVVSGLDLVE 152
+D +C IN F + + AD D + G +
Sbjct: 3997 TNVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAAEGSSPLL 4056
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
L D + Y L S + DE + A D P+ + G +++T
Sbjct: 4057 -LLPDNVRIRKYNLSSERFSEYLQDE----EYIQAVDYDWDPKDI------GLSVVYYTV 4105
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK-- 270
GE R I + Y PN F + + + L++K
Sbjct: 4106 RGEGSRFGAI------------KRAYIPN------------FESGRNNLVQEVDLKLKYV 4141
Query: 271 ---TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENG 325
+ + R +YW D +I A +DG L+S L + A+A++ + G
Sbjct: 4142 MQPDGIAVDWVGRHIYWSDVKNK----RIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLG 4197
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYF 384
++ FWTDWG+ P+IE M+G +R+ ++ + WP GL++D + R+Y+
Sbjct: 4198 LM-----------FWTDWGKEPKIESAWMNGEDRNILVFEDLGWPTGLSIDYLNNDRIYW 4246
Query: 385 ADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+D K D I+ YDGT R +VI + M ++ D+ D
Sbjct: 4247 SDFKEDVIETIKYDGTDR-RVIAKEAMNPYSLDIFED 4282
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 33/151 (21%)
Query: 296 IGKANMDGSNASILVSGQL--YEALALDLENGMLY-----YSTLKCTR------------ 336
I K +DG+ IL + ++ E+LA D + LY Y ++ R
Sbjct: 765 IFKQKIDGTGREILAANRVENVESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTVVQY 824
Query: 337 --------------WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+LF+TDW +I R DGS+ +I+T + WPNGL +D A R+
Sbjct: 825 LNNPRSVVVHPFAGYLFFTDWFRPAKIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRL 884
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
Y+ D+ D I+ +DG R+++ I+ M
Sbjct: 885 YWVDAYFDKIEHSTFDGLDRRRLGHIEQMTH 915
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 45/181 (24%)
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
G + T+I++ I +G+ D TRR+Y++D ++
Sbjct: 2454 GIHTPTVIASGIGTADGIAFDWITRRIYYSD---------------------------YL 2486
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
++ I DGSN +++ A+ LD C +L+W DW
Sbjct: 2487 NQ-------MINSMAEDGSNRTVIARVPKPRAIVLD-----------PCQGYLYWADWDT 2528
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+ +IER + G+ R I+++ + P+GLTLD +Y+ D+ L I+ G R+ +
Sbjct: 2529 HAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRIERSTLTGVDREVI 2588
Query: 406 I 406
+
Sbjct: 2589 V 2589
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 50/238 (21%)
Query: 213 WGENP-RIERIGMDGSNRSTIISTKIYWPN-GLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DG+NR+ S + P+ L LD +R +Y + + +S+E+
Sbjct: 1794 WVENPGEIHRVKTDGTNRTVFASISMVGPSMNLALDWISRNLYSTNPRT-----QSIEVL 1848
Query: 271 TNVNYSTIFRKLYWIDEGGN-GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
T ++ +RK ++G GV IG + +D G LY+
Sbjct: 1849 T-LHGDIRYRKTLIANDGTALGVGFPIG--------------------ITVDPARGKLYW 1887
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
S TD G +I MDG++ T+ + + +TLDI +++Y+A +
Sbjct: 1888 SDQG-------TDSGVPAKIASANMDGTSVKTLFTGNLEHLECVTLDIEEQKLYWAVTGR 1940
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I+ N DGT R +IL+ + + + + LYY+ E E ++
Sbjct: 1941 GVIERGNVDGTDR--MILVHQLSH------------PWGIAVHDSFLYYTDEQYEVIE 1984
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 56/219 (25%)
Query: 131 LEEKGKDHRAQD-----IVVSGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
+E G+ HR + V + + +V LA DWI ++Y + R IEV +G
Sbjct: 1795 VENPGEIHRVKTDGTNRTVFASISMVGPSMNLALDWISRNLYSTNPRTQSIEVLTLHGDI 1854
Query: 183 R---IVLAKDN----ITQPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRST 231
R ++A D + P G+ +DP+ G L+W+D G + +I MDG++ T
Sbjct: 1855 RYRKTLIANDGTALGVGFPIGITVDPARGK--LYWSDQGTDSGVPAKIASANMDGTSVKT 1912
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+ + + +TLDI +++Y+A + G G
Sbjct: 1913 LFTGNLEHLECVTLDIEEQKLYWAVT-------------------------------GRG 1941
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
V I + N+DG++ ILV QL + + + LYY+
Sbjct: 1942 V---IERGNVDGTDRMILVH-QLSHPWGIAVHDSFLYYT 1976
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 130/314 (41%), Gaps = 44/314 (14%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNITQ-PRGMMLDPSPGTRWLFW 210
GL D+ +Y++DS L+ ++ CD NG + R V+A D I + P + L ++W
Sbjct: 1602 GLTIDYPNRLLYFMDSYLDYMDFCDYNGHHRRQVIASDLIIRHPYALTLFEDS----VYW 1657
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
TD + G N+S ++ I WP G+ + + + + + F C L +
Sbjct: 1658 TDRATRRVMRANKWHGGNQSVVM-YNIQWPLGI-VAVHPSKQPNSVNPCAFSRCSHLCLL 1715
Query: 271 TNVN---YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE---- 323
++ YS + G + + D I V + ++L+ E
Sbjct: 1716 SSQGPHFYSCVC-------PSGWSLSPDLLNCLRDDQPFLITVRQHIIFGISLNPEVKSN 1768
Query: 324 NGMLYYSTLK---------CTRWLFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPN-G 372
+ M+ + ++ ++++W ENP I R+ DG+NR+ S + P+
Sbjct: 1769 DAMVPIAGIQNGLDVEFDDAEQYIYWV---ENPGEIHRVKTDGTNRTVFASISMVGPSMN 1825
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND--LMGDNGVPALALD 430
L LD +R +Y + + I+ G R + LI ND +G + +D
Sbjct: 1826 LALDWISRNLYSTNPRTQSIEVLTLHGDIRYRKTLI------ANDGTALGVGFPIGITVD 1879
Query: 431 LENGMLYYSTEGAE 444
G LY+S +G +
Sbjct: 1880 PARGKLYWSDQGTD 1893
>gi|119631685|gb|EAX11280.1| low density lipoprotein-related protein 2 [Homo sapiens]
Length = 4655
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 164/301 (54%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCDG DCPNG DE P C+ C G C++ C P GA C CP G +L+ND
Sbjct: 1325 CVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHECVQEPFGAKCLCPLGFLLAND 1384
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++EC+ G CSQ C N +GS+ CSC+ GY+LE D TCK + L++++++
Sbjct: 1385 SKTCEDIDECDILGSCSQHCYNMRGSFRCSCDTGYMLESDGRTCKVTASESLLLLVASQN 1444
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+ + + G D R
Sbjct: 1445 KIIADSVTSQVHNIYSLVENGSYIVAVDFDSISGRIFWSDATQGKTWSAFQNGTDRRV-- 1502
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ S + L E +A DW+G ++YW D L IEV +G++R VL N+T PRG+ LDP
Sbjct: 1503 VFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKNLTNPRGLALDPR 1562
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
LFW+DWG +PRIER MDGS R+ I+ KI+WP GLT+D R +YF DS LD++
Sbjct: 1563 MNEHLLFWSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYM 1622
Query: 263 D 263
D
Sbjct: 1623 D 1623
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 178/353 (50%), Gaps = 69/353 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
RC+++ KVCDG DCP DE G C + C C CH TP G C CPPG
Sbjct: 278 RCISIYKVCDGILDCPGREDENNTSTGKYCSMTLCSALN--CQYQCHETPYGGACFCPPG 335
Query: 59 EILS-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I++ NDS TC + ++C+ G C Q C + G ++C C EGY+LE + + A
Sbjct: 336 YIINHNDSRTCVEFDDCQIWGICDQKCESRPGRHLCHCEEGYILERGQYCKANDSFGEAS 395
Query: 118 LIISNRHSILVADLEEKGKDHR-------------------------------------- 139
+I SN +L+ D+ G+ R
Sbjct: 396 IIFSNGRDLLIGDIH--GRSFRILVESQNRGVAVGVAFHYHLQRVFWTDTVQNKVFSVDI 453
Query: 140 ----AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
Q+++ ++ E LA DW+ IY +++++NRI++ + +G+ R+ L +N+ PR
Sbjct: 454 NGLNIQEVLNVSVETPENLAVDWVNNKIYLVETKVNRIDMVNLDGSYRVTLITENLGHPR 513
Query: 196 GMMLDPSPGTRWLFWTDW----GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
G+ +DP+ G +LF++DW GE P++ER MDGSNR ++ TK+ WP G+TLD+ ++R
Sbjct: 514 GIAVDPTVG--YLFFSDWESLSGE-PKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKR 570
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
VY+ DS+ D+I+ V Y I RK + GG+ +P G + +G
Sbjct: 571 VYWVDSRFDYIE--------TVTYDGIQRKT--VVHGGSLIPHPFGVSLFEGQ 613
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 181/410 (44%), Gaps = 96/410 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ + K+C+ DC + +DE GC + EC C + C T C+C PG L
Sbjct: 3086 RCIEMMKLCNHLDDCLDNSDEK-GCGINECHDPSISGCDHNCTDTLTSFYCSCRPGYKLM 3144
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P CSQ C N GSYIC C GY+ E D TC+ ++ +LI S
Sbjct: 3145 SDKRTCVDIDECTEMPFVCSQKCENVIGSYICKCAPGYLREPDGKTCRQNSNIEPYLIFS 3204
Query: 122 NRH--------------------SILVADLEEKGK------------------DHRAQDI 143
NR+ +++ D + K + I
Sbjct: 3205 NRYYLRNLTIDGYFYSLILEGLDNVVALDFDRVEKRLYWIDTQRQVIERMFLNKTNKETI 3264
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPR 195
+ L E LA DW+ +YWLD+RL+ + V D NG +R +LA+ + PR
Sbjct: 3265 INHRLPAAESLAVDWVSRKLYWLDARLDGLFVSDLNGGHRRMLAQHCVDANNTFCFDNPR 3324
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G+ L P G +L+W DWG I R+GMDG+N+S IISTK+ WPNG+T+D +Y+A
Sbjct: 3325 GLALHPQYG--YLYWADWGHRAYIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWA 3382
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ L +I+ LE G + + G L
Sbjct: 3383 DAHLGYIEYSDLE----------------------------------GHHRHTVYDGALP 3408
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ + +Y WTDW + DGSNR T+++T
Sbjct: 3409 HPFAITIFEDTIY-----------WTDWNTRTVEKGNKYDGSNRQTLVNT 3447
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 142/320 (44%), Gaps = 63/320 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLA-ECKHKFGLCSNTCHPTPLGA-LCTCPPG-EI 60
C+ VCD DC + +DE GC+ E +C C G +C+C G E
Sbjct: 3939 HCIPHDNVCDDADDCGDWSDE-LGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFET 3997
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN--HTCKAINHSAAFL 118
D +C D+NECEQ G C Q C NTKGSY C C +G+ D C A S L
Sbjct: 3998 NVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAAEGSSPLLL 4057
Query: 119 IISN-----------RHSILVADLE----------------------------------- 132
+ N R S + D E
Sbjct: 4058 LPDNVRIRKYNLSSERFSEYLQDEEYIQAVDYDWDPEDIGLSVVYYTVRGEGSRFGAIKR 4117
Query: 133 ------EKGKDHRAQ--DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
E G+++ Q D+ + + +G+A DW+G HIYW D + RIEV +G R
Sbjct: 4118 AYIPNFESGRNNLVQEVDLKLKYVMQPDGIAVDWVGRHIYWSDVKNKRIEVAKLDGRYRK 4177
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L ++ QP + ++P G +FWTDWG+ P++E M+G +R+ ++ + WP GL+
Sbjct: 4178 WLISTDLDQPAAIAVNPKLGL--MFWTDWGKEPKLESAWMNGEDRNILVFEDLGWPTGLS 4235
Query: 245 LD-IATRRVYFADSKLDFID 263
+D + R+Y++D K D I+
Sbjct: 4236 IDYLNNDRIYWSDFKEDVIE 4255
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 114/253 (45%), Gaps = 61/253 (24%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G+ L DN +C N +F+++S + HS
Sbjct: 2029 CQQICLPVPGGLFSCACATGFKLNPDNRSCSPYN---SFIVVSMLSAIRGFSLELSDHSE 2085
Query: 127 LVADLEEKGKDHRAQDIVVS-------------------------------------GLD 149
+ + +G++ D+ VS G +
Sbjct: 2086 TMVPVAGQGRNALHVDVDVSSGFIYWCDFSSSVASDNAIRRIKPDGSSLMNIVTHGIGEN 2145
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ G++Y+ ++ ++ IEV N T R VL K + PR +++DP R+
Sbjct: 2146 GVRGIAVDWVAGNLYFTNAFVSETLIEVLRINTTYRRVLLKVTVDMPRHIVVDPK--NRY 2203
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
LFW D+G+ P+IER +D +NR+ ++S I P GL +D + VY+ D LD I
Sbjct: 2204 LFWADYGQRPKIERSFLDCTNRTVLVSEGIVTPRGLAVDRSDGYVYWVDDSLDII----A 2259
Query: 268 EIKTNVNYSTIFR 280
I+ N S + R
Sbjct: 2260 RIRINGENSEVIR 2272
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 75/125 (60%), Gaps = 4/125 (3%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ SG+ +G+A+DWI IY+ D I E+G+NR V+A+ + +PR ++LDP
Sbjct: 2460 VIASGIGTADGIAFDWITRRIYYSDYLNQMINSMAEDGSNRTVIAR--VPKPRAIVLDPC 2517
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W DW + +IER + G+ R I+++ + P+GLTLD +Y+ D+ L I
Sbjct: 2518 QG--YLYWADWDTHAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRI 2575
Query: 263 DCKSL 267
+ +L
Sbjct: 2576 ERSTL 2580
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 64/303 (21%)
Query: 68 CQDMNE-CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
C+D N CEQ S N + C C G+ L+ D C A+ + FLI S++ +I
Sbjct: 663 CKDNNGGCEQVCVLSHRTDNDGLGFRCKCTFGFQLDTDERHCIAVQN---FLIFSSQVAI 719
Query: 127 ----LVADLEEK-------------GKDHRAQDIVVSGLDL------------------- 150
+E G D AQD + D+
Sbjct: 720 RGIPFTLSTQEDVMVPVSGNPSFFVGIDFDAQDSTIFFSDMSKHMIFKQKIDGTGREILA 779
Query: 151 ------VEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSP 203
VE LA+DWI ++YW DS I V + T R V+ + PR +++ P
Sbjct: 780 ANRVENVESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTVVQY--LNNPRSVVVHPFA 837
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +LF+TDW +I R DGS+ +I+T + WPNGL +D A R+Y+ D+ D I+
Sbjct: 838 G--YLFFTDWFRPAKIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRLYWVDAYFDKIE 895
Query: 264 CKS-----------LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+ +E T+ IF + + + G +++ KA DG +++ SG
Sbjct: 896 HSTFDGLDRRRLGHIEQMTHPFGLAIFGEHLFFTDWRLGAIIRVRKA--DGGEMTVIRSG 953
Query: 313 QLY 315
Y
Sbjct: 954 IAY 956
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 177/457 (38%), Gaps = 106/457 (23%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT-----CPP 57
+RC+ +VC+G DC +G DE C+ PTP CT C
Sbjct: 3894 NRCIYSHEVCNGVDDCGDGTDETE----EHCRK----------PTP--KPCTEYEYKCGN 3937
Query: 58 GEILSNDSVTCQDMNECEQ----------------PGYCSQMCTN-TKGSYICSCNEGYV 100
G + +D+V C D ++C C Q CT +G +ICSC G+
Sbjct: 3938 GHCIPHDNV-CDDADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFE 3996
Query: 101 LE-YDNHTCKAINHSAAFLIISNR-------HSILVADLEEKGKDHRAQDIVVSGLDLVE 152
+D +C IN F + + AD D + G +
Sbjct: 3997 TNVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAAEGSSPLL 4056
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
L D + Y L S + DE + A D P + G +++T
Sbjct: 4057 -LLPDNVRIRKYNLSSERFSEYLQDE----EYIQAVDYDWDPEDI------GLSVVYYTV 4105
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK-- 270
GE R I + Y PN F + + + L++K
Sbjct: 4106 RGEGSRFGAI------------KRAYIPN------------FESGRNNLVQEVDLKLKYV 4141
Query: 271 ---TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENG 325
+ + R +YW D +I A +DG L+S L + A+A++ + G
Sbjct: 4142 MQPDGIAVDWVGRHIYWSDVKNK----RIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLG 4197
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYF 384
++ FWTDWG+ P++E M+G +R+ ++ + WP GL++D + R+Y+
Sbjct: 4198 LM-----------FWTDWGKEPKLESAWMNGEDRNILVFEDLGWPTGLSIDYLNNDRIYW 4246
Query: 385 ADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+D K D I+ YDGT R +VI + M ++ D+ D
Sbjct: 4247 SDFKEDVIETIKYDGTDR-RVIAKEAMNPYSLDIFED 4282
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 33/151 (21%)
Query: 296 IGKANMDGSNASILVSGQL--YEALALDLENGMLY-----YSTLKCTR------------ 336
I K +DG+ IL + ++ E+LA D + LY Y ++ R
Sbjct: 765 IFKQKIDGTGREILAANRVENVESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTVVQY 824
Query: 337 --------------WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+LF+TDW +I R DGS+ +I+T + WPNGL +D A R+
Sbjct: 825 LNNPRSVVVHPFAGYLFFTDWFRPAKIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRL 884
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
Y+ D+ D I+ +DG R+++ I+ M
Sbjct: 885 YWVDAYFDKIEHSTFDGLDRRRLGHIEQMTH 915
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 45/181 (24%)
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
G + T+I++ I +G+ D TRR+Y++D ++
Sbjct: 2454 GIHTPTVIASGIGTADGIAFDWITRRIYYSD---------------------------YL 2486
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
++ I DGSN +++ A+ LD C +L+W DW
Sbjct: 2487 NQ-------MINSMAEDGSNRTVIARVPKPRAIVLD-----------PCQGYLYWADWDT 2528
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+ +IER + G+ R I+++ + P+GLTLD +Y+ D+ L I+ G R+ +
Sbjct: 2529 HAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRIERSTLTGVDREVI 2588
Query: 406 I 406
+
Sbjct: 2589 V 2589
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 50/238 (21%)
Query: 213 WGENP-RIERIGMDGSNRSTIISTKIYWPN-GLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DG+NR+ S + P+ L LD +R +Y + + +S+E+
Sbjct: 1794 WVENPGEIHRVKTDGTNRTVFASISMVGPSMNLALDWISRNLYSTNPRT-----QSIEVL 1848
Query: 271 TNVNYSTIFRKLYWIDEGGN-GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
T ++ +RK ++G GV IG + +D G LY+
Sbjct: 1849 T-LHGDIRYRKTLIANDGTALGVGFPIG--------------------ITVDPARGKLYW 1887
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
S TD G +I MDG++ T+ + + +TLDI +++Y+A +
Sbjct: 1888 SDQG-------TDSGVPAKIASANMDGTSVKTLFTGNLEHLECVTLDIEEQKLYWAVTGR 1940
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I+ N DGT R +IL+ + + + + LYY+ E E ++
Sbjct: 1941 GVIERGNVDGTDR--MILVHQLSH------------PWGIAVHDSFLYYTDEQYEVIE 1984
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 56/219 (25%)
Query: 131 LEEKGKDHRAQD-----IVVSGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
+E G+ HR + V + + +V LA DWI ++Y + R IEV +G
Sbjct: 1795 VENPGEIHRVKTDGTNRTVFASISMVGPSMNLALDWISRNLYSTNPRTQSIEVLTLHGDI 1854
Query: 183 R---IVLAKDN----ITQPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRST 231
R ++A D + P G+ +DP+ G L+W+D G + +I MDG++ T
Sbjct: 1855 RYRKTLIANDGTALGVGFPIGITVDPARGK--LYWSDQGTDSGVPAKIASANMDGTSVKT 1912
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+ + + +TLDI +++Y+A + G G
Sbjct: 1913 LFTGNLEHLECVTLDIEEQKLYWAVT-------------------------------GRG 1941
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
V I + N+DG++ ILV QL + + + LYY+
Sbjct: 1942 V---IERGNVDGTDRMILVH-QLSHPWGIAVHDSFLYYT 1976
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 130/314 (41%), Gaps = 44/314 (14%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNITQ-PRGMMLDPSPGTRWLFW 210
GL D+ +Y++DS L+ ++ CD NG + R V+A D I + P + L ++W
Sbjct: 1602 GLTIDYPNRLLYFMDSYLDYMDFCDYNGHHRRQVIASDLIIRHPYALTLFEDS----VYW 1657
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
TD + G N+S ++ I WP G+ + + + + + F C L +
Sbjct: 1658 TDRATRRVMRANKWHGGNQSVVM-YNIQWPLGI-VAVHPSKQPNSVNPCAFSRCSHLCLL 1715
Query: 271 TNVN---YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE---- 323
++ YS + G + + D I V + ++L+ E
Sbjct: 1716 SSQGPHFYSCVC-------PSGWSLSPDLLNCLRDDQPFLITVRQHIIFGISLNPEVKSN 1768
Query: 324 NGMLYYSTLK---------CTRWLFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPN-G 372
+ M+ + ++ ++++W ENP I R+ DG+NR+ S + P+
Sbjct: 1769 DAMVPIAGIQNGLDVEFDDAEQYIYWV---ENPGEIHRVKTDGTNRTVFASISMVGPSMN 1825
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND--LMGDNGVPALALD 430
L LD +R +Y + + I+ G R + LI ND +G + +D
Sbjct: 1826 LALDWISRNLYSTNPRTQSIEVLTLHGDIRYRKTLI------ANDGTALGVGFPIGITVD 1879
Query: 431 LENGMLYYSTEGAE 444
G LY+S +G +
Sbjct: 1880 PARGKLYWSDQGTD 1893
>gi|32816595|gb|AAP88585.1| glycoprotein receptor gp330/megalin precursor [Homo sapiens]
Length = 4655
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 164/301 (54%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCDG DCPNG DE P C+ C G C++ C P GA C CP G +L+ND
Sbjct: 1325 CVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHECVQEPFGAKCLCPLGFLLAND 1384
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++EC+ G CSQ C N +GS+ CSC+ GY+LE D TCK + L++++++
Sbjct: 1385 SKTCEDIDECDILGSCSQHCYNMRGSFRCSCDTGYMLESDGRTCKVTASESLLLLVASQN 1444
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+ + + G D R
Sbjct: 1445 KIIADSVTSQVHNIYSLVENGSYIVAVDFDSISGRIFWSDATQGKTWSAFQNGTDRRV-- 1502
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ S + L E +A DW+G ++YW D L IEV +G++R VL N+T PRG+ LDP
Sbjct: 1503 VFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKNLTNPRGLALDPR 1562
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
LFW+DWG +PRIER MDGS R+ I+ KI+WP GLT+D R +YF DS LD++
Sbjct: 1563 MNEHLLFWSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYM 1622
Query: 263 D 263
D
Sbjct: 1623 D 1623
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 178/353 (50%), Gaps = 69/353 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
RC+++ KVCDG DCP DE G C + C C CH TP G C CPPG
Sbjct: 278 RCISIYKVCDGILDCPGREDENNTSTGKYCSMTLCSALN--CQYQCHETPYGGACFCPPG 335
Query: 59 EILS-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I++ NDS TC + ++C+ G C Q C + G ++C C EGY+LE + + A
Sbjct: 336 YIINHNDSRTCVEFDDCQIWGICDQKCESRPGRHLCHCEEGYILERGQYCKANDSFGEAS 395
Query: 118 LIISNRHSILVADLEEKGKDHR-------------------------------------- 139
+I SN +L+ D+ G+ R
Sbjct: 396 IIFSNGRDLLIGDIH--GRSFRILVESQNRGVAVGVAFHYHLQRVFWTDTVQNKVFSVDI 453
Query: 140 ----AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
Q+++ ++ E LA DW+ IY +++++NRI++ + +G+ R+ L +N+ PR
Sbjct: 454 NGLNIQEVLNVSVETPENLAVDWVNNKIYLVETKVNRIDMVNLDGSYRVTLITENLGHPR 513
Query: 196 GMMLDPSPGTRWLFWTDW----GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
G+ +DP+ G +LF++DW GE P++ER MDGSNR ++ TK+ WP G+TLD+ ++R
Sbjct: 514 GIAVDPTVG--YLFFSDWESLSGE-PKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKR 570
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
VY+ DS+ D+I+ V Y I RK + GG+ +P G + +G
Sbjct: 571 VYWVDSRFDYIE--------TVTYDGIQRKT--VVHGGSLIPHPFGVSLFEGQ 613
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 181/410 (44%), Gaps = 96/410 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ + K+C+ DC + +DE GC + EC C + C T C+C PG L
Sbjct: 3086 RCIEMMKLCNHLDDCLDNSDEK-GCGINECHDPSISGCDHNCTDTLTSFYCSCRPGYKLM 3144
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P CSQ C N GSYIC C GY+ E D TC+ ++ +LI S
Sbjct: 3145 SDKRTCVDIDECTEMPFVCSQKCENVIGSYICKCAPGYLREPDGKTCRQNSNIEPYLIFS 3204
Query: 122 NRH--------------------SILVADLEEKGK------------------DHRAQDI 143
NR+ +++ D + K + I
Sbjct: 3205 NRYYLRNLTIDGYFYSLILEGLDNVVALDFDRVEKRLYWIDTQRQVIERMFLNKTNKETI 3264
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPR 195
+ L E LA DW+ +YWLD+RL+ + V D NG +R +LA+ + PR
Sbjct: 3265 INHRLPAAESLAVDWVSRKLYWLDARLDGLFVSDLNGGHRRMLAQHCVDANNTFCFDNPR 3324
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G+ L P G +L+W DWG I R+GMDG+N+S IISTK+ WPNG+T+D +Y+A
Sbjct: 3325 GLALHPQYG--YLYWADWGHRAYIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWA 3382
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ L +I+ LE G + + G L
Sbjct: 3383 DAHLGYIEYSDLE----------------------------------GHHRHTVYDGALP 3408
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ + +Y WTDW + DGSNR T+++T
Sbjct: 3409 HPFAITIFEDTIY-----------WTDWNTRTVEKGNKYDGSNRQTLVNT 3447
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 141/320 (44%), Gaps = 63/320 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLA-ECKHKFGLCSNTCHPTPLGA-LCTCPPG-EI 60
C+ VCD DC + +DE GC+ E +C C G +C+C G E
Sbjct: 3939 HCIPHDNVCDDADDCGDWSDE-LGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFET 3997
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN--HTCKAINHSAAFL 118
D +C D+NECEQ G C Q C NTKGSY C C +G+ D C A S L
Sbjct: 3998 NVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAAEGSSPLLL 4057
Query: 119 IISN-----------RHSILVADLE----------------------------------- 132
+ N R S + D E
Sbjct: 4058 LPDNVRIRKYNLSSERFSEYLQDEEYIQAVDYDWDPXDIGLSVVYYTVRGEGSRFGAIKR 4117
Query: 133 ------EKGKDHRAQ--DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
E G+++ Q D+ + + +G+A DW+G HIYW D + RIEV +G R
Sbjct: 4118 AYIPNFESGRNNLVQEVDLKLKYVMQPDGIAVDWVGRHIYWSDVKNKRIEVAKLDGRYRK 4177
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L ++ QP + ++P G +FWTDWG+ P+ E M+G +R+ ++ + WP GL+
Sbjct: 4178 WLISTDLDQPAAIAVNPKLGL--MFWTDWGKEPKXESAWMNGEDRNILVFEDLGWPTGLS 4235
Query: 245 LD-IATRRVYFADSKLDFID 263
+D + R+Y++D K D I+
Sbjct: 4236 IDYLNNDRIYWSDFKEDVIE 4255
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 114/253 (45%), Gaps = 61/253 (24%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G+ L DN +C N +F+++S + HS
Sbjct: 2029 CQQICLPVPGGLFSCACATGFKLNPDNRSCSPYN---SFIVVSMLSAIRGFSLELSDHSE 2085
Query: 127 LVADLEEKGKDHRAQDIVVS-------------------------------------GLD 149
+ + +G++ D+ VS G +
Sbjct: 2086 TMVPVAGQGRNALHVDVDVSSGFIYWCDFSSSVASDNAIRRIKPDGSSLMNIVTHGIGEN 2145
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ G++Y+ ++ ++ IEV N T R VL K + PR +++DP R+
Sbjct: 2146 GVRGIAVDWVAGNLYFTNAFVSETLIEVLRINTTYRRVLLKVTVDMPRHIVVDPK--NRY 2203
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
LFW D+G+ P+IER +D +NR+ ++S I P GL +D + VY+ D LD I
Sbjct: 2204 LFWADYGQRPKIERSFLDCTNRTVLVSEGIVTPRGLAVDRSDGYVYWVDDSLDII----A 2259
Query: 268 EIKTNVNYSTIFR 280
I+ N S + R
Sbjct: 2260 RIRINGENSEVIR 2272
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 75/125 (60%), Gaps = 4/125 (3%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ SG+ +G+A+DWI IY+ D I E+G+NR V+A+ + +PR ++LDP
Sbjct: 2460 VIASGIGTADGIAFDWITRRIYYSDYLNQMINSMAEDGSNRTVIAR--VPKPRAIVLDPC 2517
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W DW + +IER + G+ R I+++ + P+GLTLD +Y+ D+ L I
Sbjct: 2518 QG--YLYWADWDTHAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRI 2575
Query: 263 DCKSL 267
+ +L
Sbjct: 2576 ERSTL 2580
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 64/303 (21%)
Query: 68 CQDMNE-CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
C+D N CEQ S N + C C G+ L+ D C A+ + FLI S++ +I
Sbjct: 663 CKDNNGGCEQVCVLSHRTDNDGLGFRCKCTFGFQLDTDERHCIAVQN---FLIFSSQVAI 719
Query: 127 ----LVADLEEK-------------GKDHRAQDIVVSGLDL------------------- 150
+E G D AQD + D+
Sbjct: 720 RGIPFTLSTQEDVMVPVSGNPSFFVGIDFDAQDSTIFFSDMSKHMIFKQKIDGTGREILA 779
Query: 151 ------VEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSP 203
VE LA+DWI ++YW DS I V + T R V+ + PR +++ P
Sbjct: 780 ANRVENVESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTVVQY--LNNPRSVVVHPFA 837
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +LF+TDW +I R DGS+ +I+T + WPNGL +D A R+Y+ D+ D I+
Sbjct: 838 G--YLFFTDWFRPAKIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRLYWVDAYFDKIE 895
Query: 264 CKS-----------LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+ +E T+ IF + + + G +++ KA DG +++ SG
Sbjct: 896 HSTFDGLDRRRLGHIEQMTHPFGLAIFGEHLFFTDWRLGAIIRVRKA--DGGEMTVIRSG 953
Query: 313 QLY 315
Y
Sbjct: 954 IAY 956
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 176/457 (38%), Gaps = 106/457 (23%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT-----CPP 57
+RC+ +VC+G DC +G DE C+ PTP CT C
Sbjct: 3894 NRCIYSHEVCNGVDDCGDGTDETE----EHCRK----------PTP--KPCTEYEYKCGN 3937
Query: 58 GEILSNDSVTCQDMNECEQ----------------PGYCSQMCTN-TKGSYICSCNEGYV 100
G + +D+V C D ++C C Q CT +G +ICSC G+
Sbjct: 3938 GHCIPHDNV-CDDADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFE 3996
Query: 101 LE-YDNHTCKAINHSAAFLIISNR-------HSILVADLEEKGKDHRAQDIVVSGLDLVE 152
+D +C IN F + + AD D + G +
Sbjct: 3997 TNVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAAEGSSPLL 4056
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
L D + Y L S + DE + A D P + G +++T
Sbjct: 4057 -LLPDNVRIRKYNLSSERFSEYLQDE----EYIQAVDYDWDPXDI------GLSVVYYTV 4105
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK-- 270
GE R I + Y PN F + + + L++K
Sbjct: 4106 RGEGSRFGAI------------KRAYIPN------------FESGRNNLVQEVDLKLKYV 4141
Query: 271 ---TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENG 325
+ + R +YW D +I A +DG L+S L + A+A++ + G
Sbjct: 4142 MQPDGIAVDWVGRHIYWSDVKNK----RIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLG 4197
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYF 384
++ FWTDWG+ P+ E M+G +R+ ++ + WP GL++D + R+Y+
Sbjct: 4198 LM-----------FWTDWGKEPKXESAWMNGEDRNILVFEDLGWPTGLSIDYLNNDRIYW 4246
Query: 385 ADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+D K D I+ YDGT R +VI + M ++ D+ D
Sbjct: 4247 SDFKEDVIETIKYDGTDR-RVIAKEAMNPYSLDIFED 4282
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 33/151 (21%)
Query: 296 IGKANMDGSNASILVSGQL--YEALALDLENGMLY-----YSTLKCTR------------ 336
I K +DG+ IL + ++ E+LA D + LY Y ++ R
Sbjct: 765 IFKQKIDGTGREILAANRVENVESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTVVQY 824
Query: 337 --------------WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+LF+TDW +I R DGS+ +I+T + WPNGL +D A R+
Sbjct: 825 LNNPRSVVVHPFAGYLFFTDWFRPAKIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRL 884
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
Y+ D+ D I+ +DG R+++ I+ M
Sbjct: 885 YWVDAYFDKIEHSTFDGLDRRRLGHIEQMTH 915
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 45/181 (24%)
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
G + T+I++ I +G+ D TRR+Y++D ++
Sbjct: 2454 GIHTPTVIASGIGTADGIAFDWITRRIYYSD---------------------------YL 2486
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
++ I DGSN +++ A+ LD C +L+W DW
Sbjct: 2487 NQ-------MINSMAEDGSNRTVIARVPKPRAIVLD-----------PCQGYLYWADWDT 2528
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+ +IER + G+ R I+++ + P+GLTLD +Y+ D+ L I+ G R+ +
Sbjct: 2529 HAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRIERSTLTGVDREVI 2588
Query: 406 I 406
+
Sbjct: 2589 V 2589
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 50/238 (21%)
Query: 213 WGENP-RIERIGMDGSNRSTIISTKIYWPN-GLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DG+NR+ S + P+ L LD +R +Y + + +S+E+
Sbjct: 1794 WVENPGEIHRVKTDGTNRTVFASISMVGPSMNLALDWISRNLYSTNPRT-----QSIEVL 1848
Query: 271 TNVNYSTIFRKLYWIDEGGN-GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
T ++ +RK ++G GV IG + +D G LY+
Sbjct: 1849 T-LHGDIRYRKTLIANDGTALGVGFPIG--------------------ITVDPARGKLYW 1887
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
S TD G +I MDG++ T+ + + +TLDI +++Y+A +
Sbjct: 1888 SDQG-------TDSGVPAKIASANMDGTSVKTLFTGNLEHLECVTLDIEEQKLYWAVTGR 1940
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I+ N DGT R +IL+ + + + + LYY+ E E ++
Sbjct: 1941 GVIERGNVDGTDR--MILVHQLSH------------PWGIAVHDSFLYYTDEQYEVIE 1984
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 56/219 (25%)
Query: 131 LEEKGKDHRAQD-----IVVSGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
+E G+ HR + V + + +V LA DWI ++Y + R IEV +G
Sbjct: 1795 VENPGEIHRVKTDGTNRTVFASISMVGPSMNLALDWISRNLYSTNPRTQSIEVLTLHGDI 1854
Query: 183 R---IVLAKDN----ITQPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRST 231
R ++A D + P G+ +DP+ G L+W+D G + +I MDG++ T
Sbjct: 1855 RYRKTLIANDGTALGVGFPIGITVDPARGK--LYWSDQGTDSGVPAKIASANMDGTSVKT 1912
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+ + + +TLDI +++Y+A + G G
Sbjct: 1913 LFTGNLEHLECVTLDIEEQKLYWAVT-------------------------------GRG 1941
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
V I + N+DG++ ILV QL + + + LYY+
Sbjct: 1942 V---IERGNVDGTDRMILVH-QLSHPWGIAVHDSFLYYT 1976
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 130/314 (41%), Gaps = 44/314 (14%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNITQ-PRGMMLDPSPGTRWLFW 210
GL D+ +Y++DS L+ ++ CD NG + R V+A D I + P + L ++W
Sbjct: 1602 GLTIDYPNRLLYFMDSYLDYMDFCDYNGHHRRQVIASDLIIRHPYALTLFEDS----VYW 1657
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
TD + G N+S ++ I WP G+ + + + + + F C L +
Sbjct: 1658 TDRATRRVMRANKWHGGNQSVVM-YNIQWPLGI-VAVHPSKQPNSVNPCAFSRCSHLCLL 1715
Query: 271 TNVN---YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE---- 323
++ YS + G + + D I V + ++L+ E
Sbjct: 1716 SSQGPHFYSCVC-------PSGWSLSPDLLNCLRDDQPFLITVRQHIIFGISLNPEVKSN 1768
Query: 324 NGMLYYSTLK---------CTRWLFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPN-G 372
+ M+ + ++ ++++W ENP I R+ DG+NR+ S + P+
Sbjct: 1769 DAMVPIAGIQNGLDVEFDDAEQYIYWV---ENPGEIHRVKTDGTNRTVFASISMVGPSMN 1825
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND--LMGDNGVPALALD 430
L LD +R +Y + + I+ G R + LI ND +G + +D
Sbjct: 1826 LALDWISRNLYSTNPRTQSIEVLTLHGDIRYRKTLI------ANDGTALGVGFPIGITVD 1879
Query: 431 LENGMLYYSTEGAE 444
G LY+S +G +
Sbjct: 1880 PARGKLYWSDQGTD 1893
>gi|1809240|gb|AAB41649.1| gp330 precursor [Homo sapiens]
Length = 4655
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 164/301 (54%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCDG DCPNG DE P C+ C G C++ C P GA C CP G +L+ND
Sbjct: 1325 CVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHECVQEPFGAKCLCPLGFLLAND 1384
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++EC+ G CSQ C N +GS+ CSC+ GY+LE D TCK + L++++++
Sbjct: 1385 SKTCEDIDECDILGSCSQHCYNMRGSFRCSCDTGYMLESDGRTCKVTASESLLLLVASQN 1444
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+ + + G D R
Sbjct: 1445 KIIADSVTSQVHNIYSLVENGSYIVAVDFDSISGRIFWSDATQGKTWSAFQNGTDRRV-- 1502
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ S + L E +A DW+G ++YW D L IEV +G++R VL N+T PRG+ LDP
Sbjct: 1503 VFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKNLTNPRGLALDPR 1562
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
LFW+DWG +PRIER MDGS R+ I+ KI+WP GLT+D R +YF DS LD++
Sbjct: 1563 MNEHLLFWSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYM 1622
Query: 263 D 263
D
Sbjct: 1623 D 1623
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 178/353 (50%), Gaps = 69/353 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
RC+++ KVCDG DCP DE G C + C C CH TP G C CPPG
Sbjct: 278 RCISIYKVCDGILDCPGREDENNTSTGKYCSMTLCSALN--CQYQCHETPYGGACFCPPG 335
Query: 59 EILS-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I++ NDS TC + ++C+ G C Q C + G ++C C EGY+LE + + A
Sbjct: 336 YIINHNDSRTCVEFDDCQIWGICDQKCESRPGRHLCHCEEGYILERGQYCKANDSFGEAS 395
Query: 118 LIISNRHSILVADLEEKGKDHR-------------------------------------- 139
+I SN +L+ D+ G+ R
Sbjct: 396 IIFSNGRDLLIGDIH--GRSFRILVESQNRGVAVGVAFHYHLQRVFWTDTVQNKVFSVDI 453
Query: 140 ----AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
Q+++ ++ E LA DW+ IY +++++NRI++ + +G+ R+ L +N+ PR
Sbjct: 454 NGLNIQEVLNVSVETPENLAVDWVNNKIYLVETKVNRIDMVNLDGSYRVTLITENLGHPR 513
Query: 196 GMMLDPSPGTRWLFWTDW----GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
G+ +DP+ G +LF++DW GE P++ER MDGSNR ++ TK+ WP G+TLD+ ++R
Sbjct: 514 GIAVDPTVG--YLFFSDWESLSGE-PKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKR 570
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
VY+ DS+ D+I+ V Y I RK + GG+ +P G + +G
Sbjct: 571 VYWVDSRFDYIE--------TVTYDGIQRKT--VVHGGSLIPHPFGVSLFEGQ 613
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 181/410 (44%), Gaps = 96/410 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ + K+C+ DC + +DE GC + EC C + C T C+C PG L
Sbjct: 3086 RCIEMMKLCNHLDDCLDNSDEK-GCGINECHDPSISGCDHNCTDTLTSFYCSCRPGYKLM 3144
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P CSQ C N GSYIC C GY+ E D TC+ ++ +LI S
Sbjct: 3145 SDKRTCVDIDECTEMPFVCSQKCENVIGSYICKCAPGYLREPDGKTCRQNSNIEPYLIFS 3204
Query: 122 NRH--------------------SILVADLEEKGK------------------DHRAQDI 143
NR+ +++ D + K + I
Sbjct: 3205 NRYYLRNLTIDGYFYSLILEGLDNVVALDFDRVEKRLYWIDTQRQVIERMFLNKTNKETI 3264
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPR 195
+ L E LA DW+ +YWLD+RL+ + V D NG +R +LA+ + PR
Sbjct: 3265 INHRLPAAESLAVDWVSRKLYWLDARLDGLFVSDLNGGHRRMLAQHCVDANNTFCFDNPR 3324
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G+ L P G +L+W DWG I R+GMDG+N+S IISTK+ WPNG+T+D +Y+A
Sbjct: 3325 GLALHPQYG--YLYWADWGHRAYIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWA 3382
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ L +I+ LE G + + G L
Sbjct: 3383 DAHLGYIEYSDLE----------------------------------GHHRHTVYDGALP 3408
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ + +Y WTDW + DGSNR T+++T
Sbjct: 3409 HPFAITIFEDTIY-----------WTDWNTRTVEKGNKYDGSNRQTLVNT 3447
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 142/320 (44%), Gaps = 63/320 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLA-ECKHKFGLCSNTCHPTPLGA-LCTCPPG-EI 60
C+ VCD DC + +DE GC+ E +C C G +C+C G E
Sbjct: 3939 HCIPHDNVCDDADDCGDWSDE-LGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFET 3997
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN--HTCKAINHSAAFL 118
D +C D+NECEQ G C Q C NTKGSY C C +G+ D C A S L
Sbjct: 3998 NVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAAEGSSPLLL 4057
Query: 119 IISN-----------RHSILVADLE----------------------------------- 132
+ N R S + D E
Sbjct: 4058 LPDNVRIRKYNLSSERFSEYLQDEEYIQAVDYDWDPKDIGLSVVYYTVRGEGSRFGAIKR 4117
Query: 133 ------EKGKDHRAQ--DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
E G+++ Q D+ + + +G+A DW+G HIYW D + RIEV +G R
Sbjct: 4118 AYIPNFESGRNNLVQEVDLKLKYVMQPDGIAVDWVGRHIYWSDVKNKRIEVAKLDGRYRK 4177
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L ++ QP + ++P G +FWTDWG+ P+IE M+G +R+ ++ + WP GL+
Sbjct: 4178 WLISTDLDQPAAIAVNPKLGL--MFWTDWGKEPKIESAWMNGEDRNILVFEDLGWPTGLS 4235
Query: 245 LD-IATRRVYFADSKLDFID 263
+D + R+Y++D K D I+
Sbjct: 4236 IDYLNNDRIYWSDFKEDVIE 4255
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 114/253 (45%), Gaps = 61/253 (24%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G+ L DN +C N +F+++S + HS
Sbjct: 2029 CQQICLPVPGGLFSCACATGFKLNPDNRSCSPYN---SFIVVSMLSAIRGFSLELSDHSE 2085
Query: 127 LVADLEEKGKDHRAQDIVVS-------------------------------------GLD 149
+ + +G++ D+ VS G +
Sbjct: 2086 TMVPVAGQGRNALHVDVDVSSGFIYWCDFSSSVASDNAIRRIKPDGSSLMNIVTHGIGEN 2145
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ G++Y+ ++ ++ IEV N T R VL K + PR +++DP R+
Sbjct: 2146 GVRGIAVDWVAGNLYFTNAFVSETLIEVLRINTTYRRVLLKVTVDMPRHIVVDPK--NRY 2203
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
LFW D+G+ P+IER +D +NR+ ++S I P GL +D + VY+ D LD I
Sbjct: 2204 LFWADYGQRPKIERSFLDCTNRTVLVSEGIVTPRGLAVDRSDGYVYWVDDSLDII----A 2259
Query: 268 EIKTNVNYSTIFR 280
I+ N S + R
Sbjct: 2260 RIRINGENSEVIR 2272
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 75/125 (60%), Gaps = 4/125 (3%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ SG+ +G+A+DWI IY+ D I E+G+NR V+A+ + +PR ++LDP
Sbjct: 2460 VIASGIGTADGIAFDWITRRIYYSDYLNQMINSMAEDGSNRTVIAR--VPKPRAIVLDPC 2517
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W DW + +IER + G+ R I+++ + P+GLTLD +Y+ D+ L I
Sbjct: 2518 QG--YLYWADWDTHAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRI 2575
Query: 263 DCKSL 267
+ +L
Sbjct: 2576 ERSTL 2580
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 64/303 (21%)
Query: 68 CQDMNE-CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
C+D N CEQ S N + C C G+ L+ D C A+ + FLI S++ +I
Sbjct: 663 CKDNNGGCEQVCVLSHRTDNDGLGFRCKCTFGFQLDTDERHCIAVQN---FLIFSSQVAI 719
Query: 127 ----LVADLEEK-------------GKDHRAQDIVVSGLDL------------------- 150
+E G D AQD + D+
Sbjct: 720 RGIPFTLSTQEDVMVPVSGNPSFFVGIDFDAQDSTIFFSDMSKHMIFKQKIDGTGREILA 779
Query: 151 ------VEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSP 203
VE LA+DWI ++YW DS I V + T R V+ + PR +++ P
Sbjct: 780 ANRVENVESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTVVQY--LNNPRSVVVHPFA 837
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +LF+TDW +I R DGS+ +I+T + WPNGL +D A R+Y+ D+ D I+
Sbjct: 838 G--YLFFTDWFRPAKIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRLYWVDAYFDKIE 895
Query: 264 CKS-----------LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+ +E T+ IF + + + G +++ KA DG +++ SG
Sbjct: 896 HSTFDGLDRRRLGHIEQMTHPFGLAIFGEHLFFTDWRLGAIIRVRKA--DGGEMTVIRSG 953
Query: 313 QLY 315
Y
Sbjct: 954 IAY 956
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 111/457 (24%), Positives = 178/457 (38%), Gaps = 106/457 (23%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT-----CPP 57
+RC+ +VC+G DC +G DE C+ PTP CT C
Sbjct: 3894 NRCIYSHEVCNGVDDCGDGTDETE----EHCRK----------PTP--KPCTEYEYKCGN 3937
Query: 58 GEILSNDSVTCQDMNECEQ----------------PGYCSQMCTN-TKGSYICSCNEGYV 100
G + +D+V C D ++C C Q CT +G +ICSC G+
Sbjct: 3938 GHCIPHDNV-CDDADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFE 3996
Query: 101 LE-YDNHTCKAINHSAAFLIISNR-------HSILVADLEEKGKDHRAQDIVVSGLDLVE 152
+D +C IN F + + AD D + G +
Sbjct: 3997 TNVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAAEGSSPLL 4056
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
L D + Y L S + DE + A D P+ + G +++T
Sbjct: 4057 -LLPDNVRIRKYNLSSERFSEYLQDE----EYIQAVDYDWDPKDI------GLSVVYYTV 4105
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK-- 270
GE R I + Y PN F + + + L++K
Sbjct: 4106 RGEGSRFGAI------------KRAYIPN------------FESGRNNLVQEVDLKLKYV 4141
Query: 271 ---TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENG 325
+ + R +YW D +I A +DG L+S L + A+A++ + G
Sbjct: 4142 MQPDGIAVDWVGRHIYWSDVKNK----RIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLG 4197
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYF 384
++ FWTDWG+ P+IE M+G +R+ ++ + WP GL++D + R+Y+
Sbjct: 4198 LM-----------FWTDWGKEPKIESAWMNGEDRNILVFEDLGWPTGLSIDYLNNDRIYW 4246
Query: 385 ADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+D K D I+ YDGT R +VI + M ++ D+ D
Sbjct: 4247 SDFKEDVIETIKYDGTDR-RVIAKEAMNPYSLDIFED 4282
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 33/151 (21%)
Query: 296 IGKANMDGSNASILVSGQL--YEALALDLENGMLY-----YSTLKCTR------------ 336
I K +DG+ IL + ++ E+LA D + LY Y ++ R
Sbjct: 765 IFKQKIDGTGREILAANRVENVESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTVVQY 824
Query: 337 --------------WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+LF+TDW +I R DGS+ +I+T + WPNGL +D A R+
Sbjct: 825 LNNPRSVVVHPFAGYLFFTDWFRPAKIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRL 884
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
Y+ D+ D I+ +DG R+++ I+ M
Sbjct: 885 YWVDAYFDKIEHSTFDGLDRRRLGHIEQMTH 915
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 45/181 (24%)
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
G + T+I++ I +G+ D TRR+Y++D ++
Sbjct: 2454 GIHTPTVIASGIGTADGIAFDWITRRIYYSD---------------------------YL 2486
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
++ I DGSN +++ A+ LD C +L+W DW
Sbjct: 2487 NQ-------MINSMAEDGSNRTVIARVPKPRAIVLD-----------PCQGYLYWADWDT 2528
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+ +IER + G+ R I+++ + P+GLTLD +Y+ D+ L I+ G R+ +
Sbjct: 2529 HAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRIERSTLTGVDREVI 2588
Query: 406 I 406
+
Sbjct: 2589 V 2589
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 50/238 (21%)
Query: 213 WGENP-RIERIGMDGSNRSTIISTKIYWPN-GLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DG+NR+ S + P+ L LD +R +Y + + +S+E+
Sbjct: 1794 WVENPGEIHRVKTDGTNRTVFASISMVGPSMNLALDWISRNLYSTNPRT-----QSIEVL 1848
Query: 271 TNVNYSTIFRKLYWIDEGGN-GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
T ++ +RK ++G GV IG + +D G LY+
Sbjct: 1849 T-LHGDIRYRKTLIANDGTALGVGFPIG--------------------ITVDPARGKLYW 1887
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
S TD G +I MDG++ T+ + + +TLDI +++Y+A +
Sbjct: 1888 SDQG-------TDSGVPAKIASANMDGTSVKTLFTGNLEHLECVTLDIEEQKLYWAVTGR 1940
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I+ N DGT R +IL+ + + + + LYY+ E E ++
Sbjct: 1941 GVIERGNVDGTDR--MILVHQLSH------------PWGIAVHDSFLYYTDEQYEVIE 1984
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 56/219 (25%)
Query: 131 LEEKGKDHRAQD-----IVVSGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
+E G+ HR + V + + +V LA DWI ++Y + R IEV +G
Sbjct: 1795 VENPGEIHRVKTDGTNRTVFASISMVGPSMNLALDWISRNLYSTNPRTQSIEVLTLHGDI 1854
Query: 183 R---IVLAKDN----ITQPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRST 231
R ++A D + P G+ +DP+ G L+W+D G + +I MDG++ T
Sbjct: 1855 RYRKTLIANDGTALGVGFPIGITVDPARGK--LYWSDQGTDSGVPAKIASANMDGTSVKT 1912
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+ + + +TLDI +++Y+A + G G
Sbjct: 1913 LFTGNLEHLECVTLDIEEQKLYWAVT-------------------------------GRG 1941
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
V I + N+DG++ ILV QL + + + LYY+
Sbjct: 1942 V---IERGNVDGTDRMILVH-QLSHPWGIAVHDSFLYYT 1976
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 130/314 (41%), Gaps = 44/314 (14%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNITQ-PRGMMLDPSPGTRWLFW 210
GL D+ +Y++DS L+ ++ CD NG + R V+A D I + P + L ++W
Sbjct: 1602 GLTIDYPNRLLYFMDSYLDYMDFCDYNGHHRRQVIASDLIIRHPYALTLFEDS----VYW 1657
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
TD + G N+S ++ I WP G+ + + + + + F C L +
Sbjct: 1658 TDRATRRVMRANKWHGGNQSVVM-YNIQWPLGI-VAVHPSKQPNSVNPCAFSRCSHLCLL 1715
Query: 271 TNVN---YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE---- 323
++ YS + G + + D I V + ++L+ E
Sbjct: 1716 SSQGPHFYSCVC-------PSGWSLSPDLLNCLRDDQPFLITVRQHIIFGISLNPEVKSN 1768
Query: 324 NGMLYYSTLK---------CTRWLFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPN-G 372
+ M+ + ++ ++++W ENP I R+ DG+NR+ S + P+
Sbjct: 1769 DAMVPIAGIQNGLDVEFDDAEQYIYWV---ENPGEIHRVKTDGTNRTVFASISMVGPSMN 1825
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND--LMGDNGVPALALD 430
L LD +R +Y + + I+ G R + LI ND +G + +D
Sbjct: 1826 LALDWISRNLYSTNPRTQSIEVLTLHGDIRYRKTLI------ANDGTALGVGFPIGITVD 1879
Query: 431 LENGMLYYSTEGAE 444
G LY+S +G +
Sbjct: 1880 PARGKLYWSDQGTD 1893
>gi|32816597|gb|AAP88586.1| glycoprotein receptor gp330/megalin precursor [Homo sapiens]
Length = 4655
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 164/301 (54%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCDG DCPNG DE P C+ C G C++ C P GA C CP G +L+ND
Sbjct: 1325 CVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHECVQEPFGAKCLCPLGFLLAND 1384
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++EC+ G CSQ C N +GS+ CSC+ GY+LE D TCK + L++++++
Sbjct: 1385 SKTCEDIDECDILGSCSQHCYNMRGSFRCSCDTGYMLESDGRTCKVTASESLLLLVASQN 1444
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+ + + G D R
Sbjct: 1445 KIIADSVTSQVHNIYSLVENGSYIVAVDFDSISGRIFWSDATQGKTWSAFQNGTDRRV-- 1502
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ S + L E +A DW+G ++YW D L IEV +G++R VL N+T PRG+ LDP
Sbjct: 1503 VFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKNLTNPRGLALDPR 1562
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
LFW+DWG +PRIER MDGS R+ I+ KI+WP GLT+D R +YF DS LD++
Sbjct: 1563 MNEHLLFWSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYM 1622
Query: 263 D 263
D
Sbjct: 1623 D 1623
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 178/353 (50%), Gaps = 69/353 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
RC+++ KVCDG DCP DE G C + C C CH TP G C CPPG
Sbjct: 278 RCISIYKVCDGILDCPGREDENNTSTGKYCSMTLCSALN--CQYQCHETPYGGACFCPPG 335
Query: 59 EILS-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I++ NDS TC + ++C+ G C Q C + G ++C C EGY+LE + + A
Sbjct: 336 YIINHNDSRTCVEFDDCQIWGICDQKCESRPGRHLCHCEEGYILERGQYCKANDSFGEAS 395
Query: 118 LIISNRHSILVADLEEKGKDHR-------------------------------------- 139
+I SN +L+ D+ G+ R
Sbjct: 396 IIFSNGRDLLIGDIH--GRSFRILVESQNRGVAVGVAFHYHLQRVFWTDTVQNKVFSVDI 453
Query: 140 ----AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
Q+++ ++ E LA DW+ IY +++++NRI++ + +G+ R+ L +N+ PR
Sbjct: 454 NGLNIQEVLNVSVETPENLAVDWVNNKIYLVETKVNRIDMVNLDGSYRVTLITENLGHPR 513
Query: 196 GMMLDPSPGTRWLFWTDW----GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
G+ +DP+ G +LF++DW GE P++ER MDGSNR ++ TK+ WP G+TLD+ ++R
Sbjct: 514 GIAVDPTVG--YLFFSDWESLSGE-PKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKR 570
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
VY+ DS+ D+I+ V Y I RK + GG+ +P G + +G
Sbjct: 571 VYWVDSRFDYIE--------TVTYDGIQRKT--VVHGGSLIPHPFGVSLFEGQ 613
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 181/410 (44%), Gaps = 96/410 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ + K+C+ DC + +DE GC + EC C + C T C+C PG L
Sbjct: 3086 RCIEMMKLCNHLDDCLDNSDEK-GCGINECHDPSISGCDHNCTDTLTSFYCSCRPGYKLM 3144
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P CSQ C N GSYIC C GY+ E D TC+ ++ +LI S
Sbjct: 3145 SDKRTCVDIDECTEMPFVCSQKCENVIGSYICKCAPGYLREPDGKTCRQNSNIEPYLIFS 3204
Query: 122 NRH--------------------SILVADLEEKGK------------------DHRAQDI 143
NR+ +++ D + K + I
Sbjct: 3205 NRYYLRNLTIDGYFYSLILEGLDNVVALDFDRVEKRLYWIDTQRQVIERMFLNKTNKETI 3264
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPR 195
+ L E LA DW+ +YWLD+RL+ + V D NG +R +LA+ + PR
Sbjct: 3265 INHRLPAAESLAVDWVSRKLYWLDARLDGLFVSDLNGGHRRMLAQHCVDANNTFCFDNPR 3324
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G+ L P G +L+W DWG I R+GMDG+N+S IISTK+ WPNG+T+D +Y+A
Sbjct: 3325 GLALHPQYG--YLYWADWGHRAYIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWA 3382
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ L +I+ LE G + + G L
Sbjct: 3383 DAHLGYIEYSDLE----------------------------------GHHRHTVYDGALP 3408
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ + +Y WTDW + DGSNR T+++T
Sbjct: 3409 HPFAITIFEDTIY-----------WTDWNTRTVEKGNKYDGSNRQTLVNT 3447
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 142/320 (44%), Gaps = 63/320 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLA-ECKHKFGLCSNTCHPTPLGA-LCTCPPG-EI 60
C+ VCD DC + +DE GC+ E +C C G +C+C G E
Sbjct: 3939 HCIPHDNVCDDADDCGDWSDE-LGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFET 3997
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN--HTCKAINHSAAFL 118
D +C D+NECEQ G C Q C NTKGSY C C +G+ D C A S L
Sbjct: 3998 NVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAAEGSSPLLL 4057
Query: 119 IISN-----------RHSILVADLE----------------------------------- 132
+ N R S + D E
Sbjct: 4058 LPDNVRIRKYNLSSERFSEYLQDEEYIQAVDYDWDPEDIGLSVVYYTVRGEGSRFGAIKR 4117
Query: 133 ------EKGKDHRAQ--DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
E G+++ Q D+ + + +G+A DW+G HIYW D + RIEV +G R
Sbjct: 4118 AYIPNFESGRNNLVQEVDLKLKYVMQPDGIAVDWVGRHIYWSDVKNKRIEVAKLDGRYRK 4177
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L ++ QP + ++P G +FWTDWG+ P++E M+G +R+ ++ + WP GL+
Sbjct: 4178 WLISTDLDQPAAIAVNPKLGL--MFWTDWGKEPKLESAWMNGEDRNILVFEDLGWPTGLS 4235
Query: 245 LD-IATRRVYFADSKLDFID 263
+D + R+Y++D K D I+
Sbjct: 4236 IDYLNNDRIYWSDFKEDVIE 4255
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 114/253 (45%), Gaps = 61/253 (24%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G+ L DN +C N +F+++S + HS
Sbjct: 2029 CQQICLPVPGGLFSCACATGFKLNPDNRSCSPYN---SFIVVSMLSAIRGFSLELSDHSE 2085
Query: 127 LVADLEEKGKDHRAQDIVVS-------------------------------------GLD 149
+ + +G++ D+ VS G +
Sbjct: 2086 TMVPVAGQGRNALHVDVDVSSGFIYWCDFSSSVASDNAIRRIKPDGSSLMNIVTHGIGEN 2145
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ G++Y+ ++ ++ IEV N T R VL K + PR +++DP R+
Sbjct: 2146 GVRGIAVDWVAGNLYFTNAFVSETLIEVLRINTTYRRVLLKVTVDMPRHIVVDPK--NRY 2203
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
LFW D+G+ P+IER +D +NR+ ++S I P GL +D + VY+ D LD I
Sbjct: 2204 LFWADYGQRPKIERSFLDCTNRTVLVSEGIVTPRGLAVDRSDGYVYWVDDSLDII----A 2259
Query: 268 EIKTNVNYSTIFR 280
I+ N S + R
Sbjct: 2260 RIRINGENSEVIR 2272
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 75/125 (60%), Gaps = 4/125 (3%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ SG+ +G+A+DWI IY+ D I E+G+NR V+A+ + +PR ++LDP
Sbjct: 2460 VIASGIGTADGIAFDWITRRIYYSDYLNQMINSMAEDGSNRTVIAR--VPKPRAIVLDPC 2517
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W DW + +IER + G+ R I+++ + P+GLTLD +Y+ D+ L I
Sbjct: 2518 QG--YLYWADWDTHAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRI 2575
Query: 263 DCKSL 267
+ +L
Sbjct: 2576 ERSTL 2580
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 64/303 (21%)
Query: 68 CQDMNE-CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
C+D N CEQ S N + C C G+ L+ D C A+ + FLI S++ +I
Sbjct: 663 CKDNNGGCEQVCVLSHRTDNDGLGFRCKCTFGFQLDTDERHCIAVQN---FLIFSSQVAI 719
Query: 127 ----LVADLEEK-------------GKDHRAQDIVVSGLDL------------------- 150
+E G D AQD + D+
Sbjct: 720 RGIPFTLSTQEDVMVPVSGNPSFFVGIDFDAQDSTIFFSDMSKHMIFKQKIDGTGREILA 779
Query: 151 ------VEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSP 203
VE LA+DWI ++YW DS I V + T R V+ + PR +++ P
Sbjct: 780 ANRVENVESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTVVQY--LNNPRSVVVHPFA 837
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +LF+TDW +I R DGS+ +I+T + WPNGL +D A R+Y+ D+ D I+
Sbjct: 838 G--YLFFTDWFRPAKIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRLYWVDAYFDKIE 895
Query: 264 CKS-----------LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+ +E T+ IF + + + G +++ KA DG +++ SG
Sbjct: 896 HSTFDGLDRRRLGHIEQMTHPFGLAIFGEHLFFTDWRLGAIIRVRKA--DGGEMTVIRSG 953
Query: 313 QLY 315
Y
Sbjct: 954 IAY 956
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 177/457 (38%), Gaps = 106/457 (23%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT-----CPP 57
+RC+ +VC+G DC +G DE C+ PTP CT C
Sbjct: 3894 NRCIYSHEVCNGVDDCGDGTDETE----EHCRK----------PTP--KPCTEYEYKCGN 3937
Query: 58 GEILSNDSVTCQDMNECEQ----------------PGYCSQMCTN-TKGSYICSCNEGYV 100
G + +D+V C D ++C C Q CT +G +ICSC G+
Sbjct: 3938 GHCIPHDNV-CDDADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFE 3996
Query: 101 LE-YDNHTCKAINHSAAFLIISNR-------HSILVADLEEKGKDHRAQDIVVSGLDLVE 152
+D +C IN F + + AD D + G +
Sbjct: 3997 TNVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAAEGSSPLL 4056
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
L D + Y L S + DE + A D P + G +++T
Sbjct: 4057 -LLPDNVRIRKYNLSSERFSEYLQDE----EYIQAVDYDWDPEDI------GLSVVYYTV 4105
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK-- 270
GE R I + Y PN F + + + L++K
Sbjct: 4106 RGEGSRFGAI------------KRAYIPN------------FESGRNNLVQEVDLKLKYV 4141
Query: 271 ---TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENG 325
+ + R +YW D +I A +DG L+S L + A+A++ + G
Sbjct: 4142 MQPDGIAVDWVGRHIYWSDVKNK----RIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLG 4197
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYF 384
++ FWTDWG+ P++E M+G +R+ ++ + WP GL++D + R+Y+
Sbjct: 4198 LM-----------FWTDWGKEPKLESAWMNGEDRNILVFEDLGWPTGLSIDYLNNDRIYW 4246
Query: 385 ADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+D K D I+ YDGT R +VI + M ++ D+ D
Sbjct: 4247 SDFKEDVIETIKYDGTDR-RVIAKEAMNPYSLDIFED 4282
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 33/151 (21%)
Query: 296 IGKANMDGSNASILVSGQL--YEALALDLENGMLY-----YSTLKCTR------------ 336
I K +DG+ IL + ++ E+LA D + LY Y ++ R
Sbjct: 765 IFKQKIDGTGREILAANRVENVESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTVVQY 824
Query: 337 --------------WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+LF+TDW +I R DGS+ +I+T + WPNGL +D A R+
Sbjct: 825 LNNPRSVVVHPFAGYLFFTDWFRPAKIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRL 884
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
Y+ D+ D I+ +DG R+++ I+ M
Sbjct: 885 YWVDAYFDKIEHSTFDGLDRRRLGHIEQMTH 915
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 45/181 (24%)
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
G + T+I++ I +G+ D TRR+Y++D ++
Sbjct: 2454 GIHTPTVIASGIGTADGIAFDWITRRIYYSD---------------------------YL 2486
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
++ I DGSN +++ A+ LD C +L+W DW
Sbjct: 2487 NQ-------MINSMAEDGSNRTVIARVPKPRAIVLD-----------PCQGYLYWADWDT 2528
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+ +IER + G+ R I+++ + P+GLTLD +Y+ D+ L I+ G R+ +
Sbjct: 2529 HAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRIERSTLTGVDREVI 2588
Query: 406 I 406
+
Sbjct: 2589 V 2589
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 50/238 (21%)
Query: 213 WGENP-RIERIGMDGSNRSTIISTKIYWPN-GLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DG+NR+ S + P+ L LD +R +Y + + +S+E+
Sbjct: 1794 WVENPGEIHRVKTDGTNRTVFASISMVGPSMNLALDWISRNLYSTNPRT-----QSIEVL 1848
Query: 271 TNVNYSTIFRKLYWIDEGGN-GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
T ++ +RK ++G GV IG + +D G LY+
Sbjct: 1849 T-LHGDIRYRKTLIANDGTALGVGFPIG--------------------ITVDPARGKLYW 1887
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
S TD G +I MDG++ T+ + + +TLDI +++Y+A +
Sbjct: 1888 SDQG-------TDSGVPAKIASANMDGTSVKTLFTGNLEHLECVTLDIEEQKLYWAVTGR 1940
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I+ N DGT R +IL+ + + + + LYY+ E E ++
Sbjct: 1941 GVIERGNVDGTDR--MILVHQLSH------------PWGIAVHDSFLYYTDEQYEVIE 1984
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 56/219 (25%)
Query: 131 LEEKGKDHRAQD-----IVVSGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
+E G+ HR + V + + +V LA DWI ++Y + R IEV +G
Sbjct: 1795 VENPGEIHRVKTDGTNRTVFASISMVGPSMNLALDWISRNLYSTNPRTQSIEVLTLHGDI 1854
Query: 183 R---IVLAKDN----ITQPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRST 231
R ++A D + P G+ +DP+ G L+W+D G + +I MDG++ T
Sbjct: 1855 RYRKTLIANDGTALGVGFPIGITVDPARGK--LYWSDQGTDSGVPAKIASANMDGTSVKT 1912
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+ + + +TLDI +++Y+A + G G
Sbjct: 1913 LFTGNLEHLECVTLDIEEQKLYWAVT-------------------------------GRG 1941
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
V I + N+DG++ ILV QL + + + LYY+
Sbjct: 1942 V---IERGNVDGTDRMILVH-QLSHPWGIAVHDSFLYYT 1976
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 130/314 (41%), Gaps = 44/314 (14%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNITQ-PRGMMLDPSPGTRWLFW 210
GL D+ +Y++DS L+ ++ CD NG + R V+A D I + P + L ++W
Sbjct: 1602 GLTIDYPNRLLYFMDSYLDYMDFCDYNGHHRRQVIASDLIIRHPYALTLFEDS----VYW 1657
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
TD + G N+S ++ I WP G+ + + + + + F C L +
Sbjct: 1658 TDRATRRVMRANKWHGGNQSVVM-YNIQWPLGI-VAVHPSKQPNSVNPCAFSRCSHLCLL 1715
Query: 271 TNVN---YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE---- 323
++ YS + G + + D I V + ++L+ E
Sbjct: 1716 SSQGPHFYSCVC-------PSGWSLSPDLLNCLRDDQPFLITVRQHIIFGISLNPEVKSN 1768
Query: 324 NGMLYYSTLK---------CTRWLFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPN-G 372
+ M+ + ++ ++++W ENP I R+ DG+NR+ S + P+
Sbjct: 1769 DAMVPIAGIQNGLDVEFDDAEQYIYWV---ENPGEIHRVKTDGTNRTVFASISMVGPSMN 1825
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND--LMGDNGVPALALD 430
L LD +R +Y + + I+ G R + LI ND +G + +D
Sbjct: 1826 LALDWISRNLYSTNPRTQSIEVLTLHGDIRYRKTLI------ANDGTALGVGFPIGITVD 1879
Query: 431 LENGMLYYSTEGAE 444
G LY+S +G +
Sbjct: 1880 PARGKLYWSDQGTD 1893
>gi|426337619|ref|XP_004032798.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Gorilla gorilla gorilla]
Length = 3709
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 164/301 (54%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCDG DCPNG DE P C+ C G C++ C P GA C CP G +L+ND
Sbjct: 379 CVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHECVQEPFGAKCLCPLGFLLAND 438
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++EC+ G CSQ C N +GS+ CSC+ GY+LE D TCK + L++++++
Sbjct: 439 SKTCEDIDECDILGSCSQHCYNMRGSFRCSCDTGYMLESDGRTCKVTASESLLLLVASQN 498
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+ + + G D R
Sbjct: 499 KIIADSVTSQVHNIYSLVENGSYIVAVDFDSISGRIFWSDATQGKTWSAFQNGTDRRV-- 556
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ S + L E +A DW+G ++YW D L IEV +G++R VL N+T PRG+ LDP
Sbjct: 557 VFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKNLTNPRGLALDPR 616
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
LFW+DWG +PRIER MDGS R+ I+ KI+WP GLT+D R +YF DS LD++
Sbjct: 617 MNEHLLFWSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYM 676
Query: 263 D 263
D
Sbjct: 677 D 677
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 181/410 (44%), Gaps = 96/410 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ + K+C+ DC + +DE GC + EC C + C T C+C PG L
Sbjct: 2140 RCIEMMKLCNHLDDCLDNSDEK-GCGINECHDPSISGCDHNCTDTLTSFYCSCRPGYKLM 2198
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P CSQ C N GSYIC C GY+ E D TC+ ++ +LI S
Sbjct: 2199 SDKRTCVDIDECTEMPFVCSQKCENVIGSYICKCAPGYLREPDGKTCRQNSNIEPYLIFS 2258
Query: 122 NRH--------------------SILVADLEEKGK------------------DHRAQDI 143
NR+ +++ D + K + I
Sbjct: 2259 NRYYLRNLTIDGYFYSLILEGLGNVVALDFDRVEKRLYWIDTQRQVVERMFLNKTNKETI 2318
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPR 195
+ L E LA DW+ +YWLD+RL+ + V D NG +R +LA+ + PR
Sbjct: 2319 INHRLPAAESLAVDWVSRKLYWLDARLDGLFVSDLNGGHRRMLAQHCVDANNTFCFDNPR 2378
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G+ L P G +L+W DWG I R+GMDG+N+S IISTK+ WPNG+T+D +Y+A
Sbjct: 2379 GLALHPQYG--YLYWADWGHRAYIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWA 2436
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ L +I+ LE G + + G L
Sbjct: 2437 DAHLGYIEYSDLE----------------------------------GHHRHTVYDGALP 2462
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ + +Y WTDW + DGSNR T+++T
Sbjct: 2463 HPFAITIFEDTIY-----------WTDWNTRTVEKGNKYDGSNRQTLVNT 2501
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 142/320 (44%), Gaps = 63/320 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLA-ECKHKFGLCSNTCHPTPLGA-LCTCPPG-EI 60
C+ VCD DC + +DE GC+ E +C C G +C+C G E
Sbjct: 2993 HCIPHDNVCDDADDCGDWSDE-LGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFET 3051
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN--HTCKAINHSAAFL 118
D +C D+NECEQ G C Q C NTKGSY C C +G+ D C A S L
Sbjct: 3052 NVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAAEGSSPLLL 3111
Query: 119 IISN-----------RHSILVADLE----------------------------------- 132
+ N R S + D E
Sbjct: 3112 LPDNVRIRKYNLSSERFSEYLQDEEYIQAVDYDWDPEDIGLSVVYYTVRGEGSRFGAIKR 3171
Query: 133 ------EKGKDHRAQ--DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
E G+++ Q D+ + + +G+A DW+G HIYW D + RIEV +G R
Sbjct: 3172 AYIPNFESGRNNLVQEVDLKLKYIMQPDGIAVDWVGRHIYWSDVKNKRIEVAKLDGRYRK 3231
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L ++ QP + ++P G +FWTDWG+ P+IE M+G +R+ ++ + WP GL+
Sbjct: 3232 WLISTDLDQPAAIAVNPKLGL--MFWTDWGKEPKIESAWMNGEDRNILVFEDLGWPTGLS 3289
Query: 245 LD-IATRRVYFADSKLDFID 263
+D + R+Y++D K D I+
Sbjct: 3290 IDYLNNDRIYWSDFKEDVIE 3309
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 114/253 (45%), Gaps = 61/253 (24%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G+ L DN +C N +F+++S + HS
Sbjct: 1083 CQQICLPVPGGLFSCACATGFKLNPDNRSCSPYN---SFIVVSMLSAIRGFSLELSDHSE 1139
Query: 127 LVADLEEKGKDHRAQDIVVS-------------------------------------GLD 149
+ + +G++ D+ VS G +
Sbjct: 1140 TMVPVAGQGRNALHVDVDVSSGFIYWCDFSSSVASDNAIRRIKPDGSSLMNIVTHGIGEN 1199
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ G++Y+ ++ ++ IEV N T R VL K + PR +++DP R+
Sbjct: 1200 GVRGIAVDWVAGNLYFTNAFVSETLIEVLRINTTYRRVLLKVTVDMPRHIVVDPK--NRY 1257
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
LFW D+G+ P+IER +D +NR+ ++S I P GL +D + VY+ D LD I
Sbjct: 1258 LFWADYGQRPKIERSFLDCTNRTVLVSEGIVTPRGLAVDRSDSYVYWVDDSLDII----A 1313
Query: 268 EIKTNVNYSTIFR 280
I+ N S + R
Sbjct: 1314 RIRINGENSEVIR 1326
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 75/125 (60%), Gaps = 4/125 (3%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ SG+ +G+A+DWI IY+ D I E+G+NR V+A+ + +PR ++LDP
Sbjct: 1514 VIASGIGTADGIAFDWITRRIYYSDYLNQTINSMAEDGSNRTVIAR--VPKPRAIVLDPC 1571
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W DW + +IER + G+ R I+++ + P+GLTLD +Y+ D+ L I
Sbjct: 1572 QG--YLYWADWDTHAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRI 1629
Query: 263 DCKSL 267
+ +L
Sbjct: 1630 ERSTL 1634
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 176/452 (38%), Gaps = 96/452 (21%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT-----CPP 57
+RC+ +VC+G DC +G DE C+ PTP CT C
Sbjct: 2948 NRCIYSHEVCNGVDDCGDGTDETE----EHCRK----------PTP--KPCTEYEYKCGN 2991
Query: 58 GEILSNDSVTCQDMNECEQ----------------PGYCSQMCTN-TKGSYICSCNEGYV 100
G + +D+V C D ++C C Q CT +G +ICSC G+
Sbjct: 2992 GHCIPHDNV-CDDADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFE 3050
Query: 101 LE-YDNHTCKAINHSAAFLIISNR-------HSILVADLEEKGKDHRAQDIVVSGLDLVE 152
+D +C IN F + + AD D + G +
Sbjct: 3051 TNVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAAEGSSPLL 3110
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
L D + Y L S + DE + A D P + G +++T
Sbjct: 3111 -LLPDNVRIRKYNLSSERFSEYLQDE----EYIQAVDYDWDPEDI------GLSVVYYTV 3159
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN 272
GE R I + Y PN + V D KL +I
Sbjct: 3160 RGEGSRFGAI------------KRAYIPNFESG--RNNLVQEVDLKLKYI-----MQPDG 3200
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYS 330
+ + R +YW D +I A +DG L+S L + A+A++ + G++
Sbjct: 3201 IAVDWVGRHIYWSDVKNK----RIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLGLM--- 3253
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKL 389
FWTDWG+ P+IE M+G +R+ ++ + WP GL++D + R+Y++D K
Sbjct: 3254 --------FWTDWGKEPKIESAWMNGEDRNILVFEDLGWPTGLSIDYLNNDRIYWSDFKE 3305
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
D I+ YDGT R +VI + M ++ D+ D
Sbjct: 3306 DVIETIKYDGTDR-RVIAKEAMNPYSLDIFED 3336
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 45/181 (24%)
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
G + T+I++ I +G+ D TRR+Y++D ++
Sbjct: 1508 GIHTPTVIASGIGTADGIAFDWITRRIYYSD---------------------------YL 1540
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
++ I DGSN +++ A+ LD C +L+W DW
Sbjct: 1541 NQ-------TINSMAEDGSNRTVIARVPKPRAIVLD-----------PCQGYLYWADWDT 1582
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+ +IER + G+ R I+++ + P+GLTLD +Y+ D+ L I+ G R+ +
Sbjct: 1583 HAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRIERSTLTGVDREVI 1642
Query: 406 I 406
+
Sbjct: 1643 V 1643
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 50/238 (21%)
Query: 213 WGENP-RIERIGMDGSNRSTIISTKIYWPN-GLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DG+NR+ S + P+ L LD +R +Y + + +S+E+
Sbjct: 848 WVENPGEIHRVKTDGTNRTVFASISMVGPSMNLALDWISRNLYSTNPRT-----QSIEVL 902
Query: 271 TNVNYSTIFRKLYWIDEGGN-GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
T ++ +RK ++G GV IG + +D G LY+
Sbjct: 903 T-LHGDIRYRKTLIANDGTALGVGFPIG--------------------ITVDPARGKLYW 941
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
S TD G +I MDG++ T+ + + +TLDI +++Y+A +
Sbjct: 942 SDQG-------TDSGVPAKIASANMDGTSVKTLFTGNLEHLECVTLDIEEQKLYWAVTGR 994
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I+ N DGT R +IL+ + + + + LYY+ E E ++
Sbjct: 995 GVIERGNVDGTDR--MILVHQLSH------------PWGIAVHDSFLYYTDEQYEVIE 1038
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 56/219 (25%)
Query: 131 LEEKGKDHRAQD-----IVVSGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
+E G+ HR + V + + +V LA DWI ++Y + R IEV +G
Sbjct: 849 VENPGEIHRVKTDGTNRTVFASISMVGPSMNLALDWISRNLYSTNPRTQSIEVLTLHGDI 908
Query: 183 R---IVLAKDN----ITQPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRST 231
R ++A D + P G+ +DP+ G L+W+D G + +I MDG++ T
Sbjct: 909 RYRKTLIANDGTALGVGFPIGITVDPARGK--LYWSDQGTDSGVPAKIASANMDGTSVKT 966
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+ + + +TLDI +++Y+A + G G
Sbjct: 967 LFTGNLEHLECVTLDIEEQKLYWAVT-------------------------------GRG 995
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
V I + N+DG++ ILV QL + + + LYY+
Sbjct: 996 V---IERGNVDGTDRMILVH-QLSHPWGIAVHDSFLYYT 1030
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 130/314 (41%), Gaps = 44/314 (14%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNITQ-PRGMMLDPSPGTRWLFW 210
GL D+ +Y++DS L+ ++ CD NG + R V+A D I + P + L ++W
Sbjct: 656 GLTIDYPNRLLYFMDSYLDYMDFCDYNGHHRRQVIASDLIIRHPYALTLFEDS----VYW 711
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
TD + G N+S ++ I WP G+ + + + + + F C L +
Sbjct: 712 TDRATRRVMRANKWHGGNQSVVM-YNIQWPLGI-VAVHPSKQPNSVNPCAFSRCSHLCLL 769
Query: 271 TNVN---YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE---- 323
++ YS + G + + D I V + ++L+ E
Sbjct: 770 SSQGPHFYSCVC-------PSGWSLSPDLLNCLRDDQPFLITVRQHIIFGISLNPEVKSN 822
Query: 324 NGMLYYSTLK---------CTRWLFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPN-G 372
+ M+ + ++ ++++W ENP I R+ DG+NR+ S + P+
Sbjct: 823 DAMVPIAGIQNGLDVEFDDAEQYIYWV---ENPGEIHRVKTDGTNRTVFASISMVGPSMN 879
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND--LMGDNGVPALALD 430
L LD +R +Y + + I+ G R + LI ND +G + +D
Sbjct: 880 LALDWISRNLYSTNPRTQSIEVLTLHGDIRYRKTLI------ANDGTALGVGFPIGITVD 933
Query: 431 LENGMLYYSTEGAE 444
G LY+S +G +
Sbjct: 934 PARGKLYWSDQGTD 947
>gi|291391690|ref|XP_002712217.1| PREDICTED: low density lipoprotein-related protein 2 [Oryctolagus
cuniculus]
Length = 4649
Score = 227 bits (579), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 164/301 (54%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ +CD DCPNG DE P C+ A C G C++ C P GA C CP G L+ND
Sbjct: 1322 CVNLSALCDNVFDCPNGTDESPLCNQASCSDFNGGCTHQCIQGPFGASCLCPLGYQLAND 1381
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++EC+ PG+CSQ C N +GS+ CSC+ Y+LE D TCKAI L+++++
Sbjct: 1382 SKTCEDIDECDNPGFCSQHCFNMRGSFRCSCDNEYMLEGDGRTCKAIASENLLLLVASQS 1441
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+ ++ + G D R
Sbjct: 1442 RIVADNITSQVHNIYSLVQGGSNIVAVDFDSVSGRIFWSDASQGKTWSVFQNGTDRRV-- 1499
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ SG+ + + +A DW+G ++YW D L IEV +G+ R VL N+T PRG+ LDP
Sbjct: 1500 VLDSGVVMTQSIAVDWVGRNLYWTDYALETIEVSRIDGSYRTVLISKNVTNPRGLALDPR 1559
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+FW+DWG +PRIER MDGS R+ II KI P GLT+D R +YF DS LD+I
Sbjct: 1560 MSDHLMFWSDWGHHPRIERASMDGSLRTIIIQDKIVLPCGLTIDYPNRLIYFMDSYLDYI 1619
Query: 263 D 263
D
Sbjct: 1620 D 1620
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 118/350 (33%), Positives = 176/350 (50%), Gaps = 65/350 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+C+ + KVCDG DCP G DE G C + +C C CH TP G C CPP
Sbjct: 275 QCIPINKVCDGILDCPGGEDENSTADGRSCSMTQCPTLN--CEYQCHQTPSGGSCFCPPA 332
Query: 59 EILS-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH-SAA 116
I++ NDS TC D ++C+ G C Q C G + C C EGY+LE + H CKA + A
Sbjct: 333 SIINQNDSRTCIDFDDCQIWGICDQKCEYQFGHHRCLCEEGYILEREQH-CKANDSFDEA 391
Query: 117 FLIISNRHSILVADLEEK---------------GKDHR-----------AQDIVVS---- 146
+I SN +L+ D+ + G D QD V S
Sbjct: 392 SIIFSNGRDVLMGDIHGRSLQILVQSQNRGVAVGVDFHYRLRRVFWTDTVQDKVFSIDIN 451
Query: 147 ----------GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+D E LA DW+ +Y +++++NRI+V + +G+ R L +++ PRG
Sbjct: 452 GLNIQEVLNVSVDAPENLAVDWVNNKLYLVETKVNRIDVANLDGSQRFTLITEDLGHPRG 511
Query: 197 MMLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
+ LDP+ G +LF++DW P++ER MDGSNR ++ TK+ WP G+TLD+ ++R+Y
Sbjct: 512 LALDPTVG--YLFFSDWASLSGEPKLERAFMDGSNRKDLVKTKLGWPAGITLDMISKRIY 569
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
+ D + D+I+ V Y + RK + GG+ VP G + +G
Sbjct: 570 WVDCRYDYIE--------TVTYDGVQRKT--VMRGGSLVPHPFGISLFEG 609
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 178/410 (43%), Gaps = 96/410 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + KVC+ DC + +DE GC + EC C + C T C+C PG L
Sbjct: 3079 HCIEMVKVCNHLDDCTDNSDEK-GCGINECHDSSISGCDHNCTDTLTSFYCSCRPGYKLM 3137
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P CSQ C N GSYIC C GY+ E D TC+ + +LI S
Sbjct: 3138 SDKRTCVDIDECKEMPYVCSQKCENEIGSYICKCAPGYIREPDGKTCRQNSDIEPYLIFS 3197
Query: 122 NRH--------------------SILVADLEEKGK-----------------DHRAQDIV 144
NR+ +++ D + K + ++++
Sbjct: 3198 NRYYLRNLTTDGHLYSLILQGLGNVVALDFDRVEKRLYWIDIQKQVIERMFLNKTNREVI 3257
Query: 145 VS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPR 195
+S L E LA DW+ +YW+D+ L+ + V D G R+ LA+ + PR
Sbjct: 3258 ISHKLPAAESLAVDWVARKLYWVDAHLDCLFVSDLEGRYRLTLAQHCVDANGTFCFENPR 3317
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G++L P G ++W DWG I R+GMDG+N+S IISTK+ WPN +T+D +Y+A
Sbjct: 3318 GLVLHPQYGH--VYWADWGHRAYIARVGMDGTNKSVIISTKLEWPNAITIDYTNDHLYWA 3375
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ L +I+ LE G + + G L
Sbjct: 3376 DAHLGYIEYSDLE----------------------------------GRHRHTVYDGTLP 3401
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ + +Y WTDW + DGSNR +++T
Sbjct: 3402 HPFAITVFEDTVY-----------WTDWNTRTVEKGNKYDGSNRMMLVNT 3440
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 102/180 (56%), Gaps = 19/180 (10%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ S + +G+A+DWI IY+ D I E+G+ R ++A+ +++PR ++LDP
Sbjct: 2457 VIASDIGTPDGIAFDWINRRIYYSDFSNQTINSMAEDGSKRTLIAR--VSKPRAIVLDPC 2514
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWG N +IER + G+ R I++T + WPNGLTLD T +Y+AD+ L I
Sbjct: 2515 RG--YMYWTDWGTNAKIERATLGGNFRVPIVNTSLVWPNGLTLDYETDLLYWADASLRKI 2572
Query: 263 DCKSL-----EIKTNVNYS----TIFRK-LYWIDEGGNGVPLKIGKAN-MDGSNASILVS 311
+ +L E+ N + T++ + +YW D KI +AN DGS+ + +
Sbjct: 2573 ERSTLTGTEREVIVNTAFHAFGLTVYDQYIYWTDL----YTQKIYRANKYDGSDQIAMTT 2628
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 137/319 (42%), Gaps = 61/319 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGA-LCTCPPG-EI 60
C++ VCD DC + +DE GC+L + + LC C G +C+C PG +
Sbjct: 3932 HCISQHYVCDNVDDCGDHSDEA-GCNLGKNRTCAENLCEQNCTELSGGGFICSCRPGYKA 3990
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY---VLEYDNHTCKAINHSAAF 117
+ D +CQD+NECEQ G C Q C NTKGSY C C +G+ + Y C A +
Sbjct: 3991 GTLDRNSCQDINECEQFGVCPQNCQNTKGSYECFCADGFRSMSVRY-GERCAADGNPPLL 4049
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDL---VEGLAYDWIGGHIYWLDSRLNRIE 174
L+ N EK D+ + + +D EG+ + + S I+
Sbjct: 4050 LLPENVRIRKYNLSSEKFSDYLEDEEHIQAVDYDWDPEGIGLSVVYYTVLAQGSEFGAIK 4109
Query: 175 VCD----ENGTNRIVLAKD----NITQPRGMMLD-------------------------- 200
E+G+N ++ D + QP G+ +D
Sbjct: 4110 RAYIPNFESGSNNLMHEDDLGLKYVMQPDGLAVDWVGRHIYWSDAMNQRIEVARLDGRYR 4169
Query: 201 ---------------PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
+P ++WTDWG+ P+IE M+G +R+ ++S + WP GL++
Sbjct: 4170 KWLITTQLDQPAAIVVNPKLGLMYWTDWGKEPKIESAWMNGEHRNVLVSEDLGWPTGLSI 4229
Query: 246 D-IATRRVYFADSKLDFID 263
D + ++Y++D K D I+
Sbjct: 4230 DYLNNDQIYWSDLKEDIIE 4248
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 57/235 (24%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G+ L D+ TC N +F+++S + HS
Sbjct: 2026 CQQICLPVPGGLFSCACATGFKLNPDHRTCSLYN---SFIVVSMLSAIRGFSVELSDHSE 2082
Query: 127 LVADLEEKGKDHRAQDIVVS-------------------------------------GLD 149
+ + +G++ D+ +S G +
Sbjct: 2083 AMVPVAGQGRNALHVDVDMSSGFIYWCDFSSSVRSYNAIRRIKPDGSSFASIITNGIGAN 2142
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ G++Y+ ++ ++ IEV N T R VL K + PR +++DP R+
Sbjct: 2143 GVRGIAVDWVAGNLYFTNAFVSETLIEVLRINTTYRRVLLKVTVDMPRHIVVDPK--NRY 2200
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
LFW D+G+ P+IER +D +NR+ ++S I P GL +D + +Y+ D LD I
Sbjct: 2201 LFWADYGQKPKIERSLLDCTNRTVLVSDGIVTPRGLAVDRSNGYIYWVDDSLDII 2255
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 121/334 (36%), Gaps = 94/334 (28%)
Query: 75 EQPGYCSQMCTNTKGSYICSCNEGY-VLEYDNHTCKAINHSAAFLIISNRHSILVADLEE 133
E G CS +C GS C + LE D C + + N L D E
Sbjct: 2345 ENNGGCSHLCFALPGSNTPKCGCAFGTLESDGKNCAISTENFLIFALDNSLRSLHLDPEN 2404
Query: 134 KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
+A +D N I V +N NRI L + ++
Sbjct: 2405 HSPPFQA-------------------------IDVERNAIAVDYDNINNRIYLTQQVVSG 2439
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS-TIISTKIYWPNGLTLDIATRRV 252
P +I + + N S T+I++ I P+G+ D RR+
Sbjct: 2440 PG----------------------QISYVSLYSGNHSPTVIASDIGTPDGIAFDWINRRI 2477
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y++D +S I DGS +++
Sbjct: 2478 YYSD------------------FSN----------------QTINSMAEDGSKRTLIARV 2503
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
A+ LD C +++WTDWG N +IER + G+ R I++T + WPNG
Sbjct: 2504 SKPRAIVLD-----------PCRGYMYWTDWGTNAKIERATLGGNFRVPIVNTSLVWPNG 2552
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
LTLD T +Y+AD+ L I+ GT R+ ++
Sbjct: 2553 LTLDYETDLLYWADASLRKIERSTLTGTEREVIV 2586
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 43/241 (17%)
Query: 63 NDSVTCQDMNE-CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF---- 117
N S C+ N CEQ S N Y C C G+ L+ D C A+ + F
Sbjct: 655 NASNPCESNNGGCEQVCLLSHRTDNGGLGYRCKCLFGFQLDQDERHCIAVKNFLIFSSES 714
Query: 118 ------LIISNRHSILVA---------------------------DLEEKGK-DHRAQDI 143
IS + ++V D+ K K D ++I
Sbjct: 715 AIRGIPFSISTQEDVMVPLTGSPSFFLGIDFDAQESTIFYSDTSRDMIYKQKIDGTGREI 774
Query: 144 VVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ + ++ VE LA+DWI ++YW+D+ + V +R + +++ PR +++ P
Sbjct: 775 LTANRVENVESLAFDWISRNLYWIDTSYKSVSVMRLADKSRRTIV-EHLNNPRAIVVHPI 833
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G ++F++DW +I R DGS+ I++T I WPNGL +D R+Y+ D+ D I
Sbjct: 834 SG--YIFFSDWFRPAKIMRAWCDGSHLVPIVNTTIGWPNGLAIDWGALRLYWVDAFFDTI 891
Query: 263 D 263
+
Sbjct: 892 E 892
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 80/147 (54%), Gaps = 19/147 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ R +YW D + +I A +DG L++ QL + A+ ++ + G++Y
Sbjct: 4145 VGRHIYWSD----AMNQRIEVARLDGRYRKWLITTQLDQPAAIVVNPKLGLMY------- 4193
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDF 394
WTDWG+ P+IE M+G +R+ ++S + WP GL++D + ++Y++D K D I+
Sbjct: 4194 ----WTDWGKEPKIESAWMNGEHRNVLVSEDLGWPTGLSIDYLNNDQIYWSDLKEDIIET 4249
Query: 395 CNYDGTGRQQVILIDLMVEFTNDLMGD 421
YDGT R ++I M ++ D+ D
Sbjct: 4250 MKYDGTDR-RIITHGAMKPYSLDIFED 4275
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 27/185 (14%)
Query: 242 GLTLDIATRRVYFADSKLDFI-----DCKSLEIKT--------NVNYSTIFRKLYWIDEG 288
G+ D ++++D+ D I D EI T ++ + I R LYWID
Sbjct: 742 GIDFDAQESTIFYSDTSRDMIYKQKIDGTGREILTANRVENVESLAFDWISRNLYWIDTS 801
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
V + D S +I+ A+ + +G ++F++DW +
Sbjct: 802 YKSVSVM---RLADKSRRTIVEHLNNPRAIVVHPISG-----------YIFFSDWFRPAK 847
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I R DGS+ I++T I WPNGL +D R+Y+ D+ D I+ +DG R+++ I
Sbjct: 848 IMRAWCDGSHLVPIVNTTIGWPNGLAIDWGALRLYWVDAFFDTIEHSTFDGLDRKRLSRI 907
Query: 409 DLMVE 413
M
Sbjct: 908 QQMTH 912
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/398 (20%), Positives = 147/398 (36%), Gaps = 105/398 (26%)
Query: 56 PPGEILSNDSVTCQDMNECEQPGYCSQMC---TNTKGSYICSCNEGYVLEYDNHTCKAIN 112
P G ++ + S + N C +CS +C + + C+C G+ L +D+ C +
Sbjct: 1683 PLGIVVVHPSKQPESTNPCAS-AHCSHLCLLSSQGPNFFSCACPSGWNLSHDSVNC--VR 1739
Query: 113 HSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNR 172
FLI + I L + K + A + +SG+ + +D IY
Sbjct: 1740 DEQPFLISVRQRIIFGISLNPEEKSNDAM-VPISGIQNGFDVEFDDSEQFIY-------- 1790
Query: 173 IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP-RIERIGMDGSNRST 231
W ENP I R+ +GSNR+
Sbjct: 1791 ----------------------------------------WAENPGEIHRVKTNGSNRTV 1810
Query: 232 IISTKIYWPN-GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN 290
++ + L LD ++ +Y+ + + +S+E+ T + T +RK ++G
Sbjct: 1811 FAPLSLHGTSMSLALDWISKNMYYTNPRS-----QSIEVLT-LRGDTRYRKTLITNDGTA 1864
Query: 291 -GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
GV IG + +D G LY+S TD G +I
Sbjct: 1865 LGVGFPIG--------------------ITVDPVRGKLYWSD-------HGTDSGVPAKI 1897
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
MDG++ T+ + + +TLDI +++Y+A + I+ N DGT R +IL+
Sbjct: 1898 ASANMDGTSLKTLFTGNLDHLEFITLDIQEQKLYWAVTSRGVIERGNVDGTER--MILVH 1955
Query: 410 LMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
+ + + LYY+ E E ++
Sbjct: 1956 HLSH------------PWGIAVYESFLYYADEQYEVIE 1981
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 14/141 (9%)
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG S+++ G L +ALD + + + L+W D + IER+ ++ +NR
Sbjct: 3208 DGHLYSLILQG-LGNVVALDFD---------RVEKRLYWIDI-QKQVIERMFLNKTNREV 3256
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
IIS K+ L +D R++Y+ D+ LD + D GR ++ L V+ +
Sbjct: 3257 IISHKLPAAESLAVDWVARKLYWVDAHLDCLFV--SDLEGRYRLTLAQHCVDANGTFCFE 3314
Query: 422 NGVPALALDLENGMLYYSTEG 442
N L L + G +Y++ G
Sbjct: 3315 NPR-GLVLHPQYGHVYWADWG 3334
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 110/510 (21%), Positives = 185/510 (36%), Gaps = 159/510 (31%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG----CDLAECKHKFGLCSNT------- 43
C+ CDG DC +G+DE P CD + C + C+
Sbjct: 3847 CIQSLWKCDGDNDCGDGSDEELHLCLGVPCDPPHRFRCDNSRCIYSHRQCNGVDDCGDGT 3906
Query: 44 ------CHPTPLGALCT-----CPPGEILSNDSVTCQDMNEC----EQPG---------- 78
C P P CT C G +S V C ++++C ++ G
Sbjct: 3907 DEKEEHCRP-PTPRPCTQDEFKCSSGHCISQHYV-CDNVDDCGDHSDEAGCNLGKNRTCA 3964
Query: 79 --YCSQMCTN-TKGSYICSCNEGYVL-EYDNHTCKAINHSAAFLIISNR----------- 123
C Q CT + G +ICSC GY D ++C+ IN F +
Sbjct: 3965 ENLCEQNCTELSGGGFICSCRPGYKAGTLDRNSCQDINECEQFGVCPQNCQNTKGSYECF 4024
Query: 124 -----HSILVADLEEKGKDHR------AQDIVVSGLDL--------------VEGLAYDW 158
S+ V E D +++ + +L ++ + YDW
Sbjct: 4025 CADGFRSMSVRYGERCAADGNPPLLLLPENVRIRKYNLSSEKFSDYLEDEEHIQAVDYDW 4084
Query: 159 ----IGGHIYWLD--------SRLNRIEVCD-ENGTNRIVLAKD----NITQPRGMMLDP 201
IG + + + R + + E+G+N ++ D + QP G+ +D
Sbjct: 4085 DPEGIGLSVVYYTVLAQGSEFGAIKRAYIPNFESGSNNLMHEDDLGLKYVMQPDGLAVDW 4144
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
R ++W+D N RIE +DG R +I+T++ P + + + KL
Sbjct: 4145 V--GRHIYWSD-AMNQRIEVARLDGRYRKWLITTQLDQPAAIVV----------NPKLGL 4191
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALA 319
+YW D G KI A M+G + ++LVS L L+
Sbjct: 4192 --------------------MYWTDWGKEP---KIESAWMNGEHRNVLVSEDLGWPTGLS 4228
Query: 320 LD-LENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 378
+D L N +Y+S LK IE + DG++R I + +LDI
Sbjct: 4229 IDYLNNDQIYWSDLK------------EDIIETMKYDGTDRRIITHGAM---KPYSLDIF 4273
Query: 379 TRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
++Y+ + + + G G ++ +L+
Sbjct: 4274 EDQLYWVSKEKGEVWKQDKFGQGEKEKMLV 4303
>gi|17508271|ref|NP_492127.1| Protein LRP-1 [Caenorhabditis elegans]
gi|1708868|sp|Q04833.1|LRP_CAEEL RecName: Full=Low-density lipoprotein receptor-related protein;
Short=LRP; Flags: Precursor
gi|156360|gb|AAA28105.1| LDL receptor-related protein [Caenorhabditis elegans]
gi|3876533|emb|CAA98124.1| Protein LRP-1 [Caenorhabditis elegans]
Length = 4753
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 125/299 (41%), Positives = 160/299 (53%), Gaps = 43/299 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ L ++CDGKT CP G DEG C C CS CH +P G +C+CP GE L N
Sbjct: 1373 CIPLHQLCDGKTHCPGGTDEGGRCARDLCSADRAGCSFKCHNSPNGPICSCPFGEQLVN- 1431
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK-AINHSAAFLIISNR 123
C+ NEC CSQ C + K + CSC+EGY L+ D TCK A N + +SNR
Sbjct: 1432 KTKCEPENECLDSSSCSQRCKDEKHGFTCSCDEGYELDVDKRTCKVADNVKDTRIYVSNR 1491
Query: 124 HSILVAD--------------------------------------LEEKGKDHRAQDIVV 145
+ I +D L A +
Sbjct: 1492 NRIYYSDHKLDNWHTFGAIVENAIALAWDSLTDRIYWSDIREKKILSANRNGTNATVFIA 1551
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPG 204
GLD+ EG+A DW+G ++YW+DS LN IEV + E+ R +L N++QPRG+ +DP G
Sbjct: 1552 DGLDITEGIALDWVGRNLYWVDSSLNTIEVANLEDPKQRTLLVHQNVSQPRGIAVDPRKG 1611
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+FWTDWG+NP IER MDG++R I+ TKIYWPN + LD T RVYFADSKLDFID
Sbjct: 1612 V--MFWTDWGQNPCIERASMDGTDRQIIVKTKIYWPNTIALDYTTDRVYFADSKLDFID 1668
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 180/428 (42%), Gaps = 123/428 (28%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGL---CSNTCHPTPLGALCTCPPGEI 60
C++ K+CDG DC +GADE +C C CHP+P G CTCP G
Sbjct: 274 HCIDQLKLCDGSKDCADGADE------QQCSQNLCPSLGCQAGCHPSPHGGECTCPSGYK 327
Query: 61 LSND-SVTCQDMNECEQPGYCSQMCTNTKGSYICSC-NEGYVLEY------DNHT----C 108
L + TC D+NEC + GYC Q+C N + + CSC + + L+ DN T C
Sbjct: 328 LDDRFHRTCSDINECAEFGYCDQLCANHRPGFTCSCLGDCFTLQMEHGPGKDNLTMRGYC 387
Query: 109 KAINHSAAFLIISNR-------------------------------------------HS 125
+ N L ++ R HS
Sbjct: 388 VSNNADKMKLFVARREGLYRLNPKNPDEEVKKLASGEFIYGIDFDYGDRKIFWTDRLAHS 447
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
AD++++G+ + + + + L LA DWI +Y ++S RI+V +G R V
Sbjct: 448 AFSADVDDEGEISQIKKLSLKSLVYPRCLAVDWITNTLYIIESGSRRIDVSSYDGERRTV 507
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
L D +T P + LDP G +F+T+ ++E MDG+NR T+++T + +G+ +
Sbjct: 508 LLADGLTLPLDIALDPLRGE--MFFTN---QLKLEAAAMDGTNRRTLVNTHTHQVSGIVV 562
Query: 246 DIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305
DI +RVY+ D K+D ++ +++Y R++ + +G N VP G A D
Sbjct: 563 DITAKRVYWVDPKVDRLE--------SIDYQGNDRRI--VAQGMNVVPHPFGLALFD--- 609
Query: 306 ASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE--NPRIERIGMDGSNRSTII 363
++L+WTDW ++E+ G D
Sbjct: 610 ------------------------------QYLYWTDWTRLGVIQVEKFGSD-------- 631
Query: 364 STKIYWPN 371
TK+ W N
Sbjct: 632 -TKLLWSN 638
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 142/311 (45%), Gaps = 54/311 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++ KVCD DC + +DE C + EC + LC C +G C C G I
Sbjct: 3198 ECIDDAKVCDRNFDCTDRSDESSLCFIDECSLAEKPLCEQKCMDMKIGYKCDCFEGFAID 3257
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN-HSAAFLI 119
+D +C ++NEC E CSQ C + GSY C C +GY L D+H+CK F +
Sbjct: 3258 ISDQKSCHNVNECYEGISGCSQKCDDKIGSYKCGCVDGYQLSSDDHSCKRTEMEPEPFFL 3317
Query: 120 ISNRHSI----------------------LVADLEEK-------GK------DHRAQDIV 144
++N+H I L DL EK GK D D
Sbjct: 3318 LANKHYIRKISIDGNKYELAAQGFDNVVSLDIDLTEKKAYLIDQGKLRLLRVDLDEMDSP 3377
Query: 145 VSGLDLV--------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+S + V EG+A DW+G +Y L+ + I VC+ +G L +D I QP+
Sbjct: 3378 LSSYETVLRHNVYGTEGIAVDWVGRKLYMLNRQERSIRVCELDGRFCKTLIRDRIQQPKA 3437
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR-----STIISTKIYWPNGLTLDIATRR 251
+++ P G +LF+T+W P I RI +DGS + + WPN + +D + R
Sbjct: 3438 IVVHPGKG--YLFFTEWSLQPYIGRIALDGSPELQDPIFKLAEHDLGWPNAIAIDYFSDR 3495
Query: 252 VYFADSKLDFI 262
+++ D+ L+ I
Sbjct: 3496 LFWGDAHLNEI 3506
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 114/463 (24%), Positives = 171/463 (36%), Gaps = 93/463 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
+CVN T CD K DC + +DE GC E G C + C G C C
Sbjct: 4060 KCVNGTVACDRKDDCGDASDE-IGCSKHGGKTSCEAFGNNGGCKHICTDVRDGFYCHCRD 4118
Query: 58 GEILSNDSVT-CQDMNECEQPGYCSQMCTNTKGSYICSCNEGY-----VLEYDNHTCKAI 111
G S C D++EC C+Q+C NTKGSY+C C+E Y V C+A
Sbjct: 4119 GFRPDPQSPKECIDIDECAGNNTCTQLCLNTKGSYLCRCHEDYENNVVVGSMTGKDCRA- 4177
Query: 112 NHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN 171
AA ++I S++ L G + A + + G+A+D +YW+D
Sbjct: 4178 KGDAANVMIGADDSLVQLSLHGSGTNRHAAAKANDDDNDIIGIAFDPRKELMYWIDGS-- 4235
Query: 172 RIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRST 231
E R +A N + G LD +D +
Sbjct: 4236 ------ERTIYRSAIANGNQSH-EGQKLD-----------------------VDFAAMGV 4265
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+ P + +D T + FI S I+ + + R ID G
Sbjct: 4266 V-------PTAIAVDYTTGNL--------FIAAVSENIENGLVTARKKRMSEPIDNQNTG 4310
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
I DG +V+G L + AL T + ++D G + +IE
Sbjct: 4311 F---IFVCLPDGRYLKKIVAGHLQQPTAL---------ITAPSAGRICYSDAGLHAKIEC 4358
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIAT-RRVYFADSKLDFIDFCNYDGTGRQQVI---- 406
MDG++R I+ ++ P + +D R+Y+ D K +D N DG+ R V+
Sbjct: 4359 ADMDGTHRQIIVKDLVFSPTSMAIDEGKGNRIYWVDPKYRRVDAVNIDGSERTTVVHDRH 4418
Query: 407 ---LIDLMVE------------FTNDLMGDNGVPALALDLENG 434
+D+ + D G V LA DLE+G
Sbjct: 4419 IPYAVDVFENHIYWLSRESKTLYVQDKFGRGRVSVLASDLEDG 4461
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 96/192 (50%), Gaps = 18/192 (9%)
Query: 151 VEGLAYDWIGGHIYWL--DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
++ LA DWI ++Y++ D+ IEV +GT R +L P + +DP +R+L
Sbjct: 2205 IKSLAIDWINYNMYFINHDAERTNIEVSKLDGTYRKILLTTKTETPSSIAVDPV--SRYL 2262
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI------ 262
+W D G+ P I+R +DGS R I+S+ I P L +D+A++ +Y++D+K+D I
Sbjct: 2263 YWADQGQKPTIQRSFLDGSRREVIVSSGIAEPTDLVVDVASKMIYWSDAKMDGIYRVRST 2322
Query: 263 ----DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
+ +I + + + +YW D K+ +A + S+L+S A
Sbjct: 2323 GGTPELVRSDIASAAGVALHGQNMYWTDNRLE----KLFRATSKPNQTSLLLSPTTVAAS 2378
Query: 319 ALDLENGMLYYS 330
D+ + ++ S
Sbjct: 2379 LKDIGDVAVFSS 2390
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 127/335 (37%), Gaps = 55/335 (16%)
Query: 80 CSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII---SNRHSILVADLEEKG 135
CS +C N K ++ C C G L+ C I+ + FL+I +N I + EK
Sbjct: 1756 CSHLCLLNNKNTFTCKCPMGEKLDASGKKC--IDDAKPFLVIIQKTNVFGIEMNSASEKE 1813
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
A + +SGL AYD + ++ L+ + + + I + N
Sbjct: 1814 TPVLAGMVPLSGLGNAFDAAYDALSEEMFILEHTNHAKTLAQITTDSAIYRSTVNGGNKT 1873
Query: 196 GMMLDPSPGTRWLFWTDW-GEN--------PRIERIGMDGSNRSTIISTKIYWPNGLTLD 246
M P + DW G N IE I G ++I + P +
Sbjct: 1874 KMFSSAVPDDAYCLGFDWNGRNLVVGNKITQTIEIIRTQGKQYRSVILSNDQSPTAVVTP 1933
Query: 247 IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
+A + + + Y ++W+D GG K+ +A +DGSN
Sbjct: 1934 VA------------------IAVDADKGY------VFWLDRGGGAADAKVARAGLDGSNP 1969
Query: 307 SILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
++ S L E +A+D N +Y+S K RI + DG +R ++S
Sbjct: 1970 LVIASNDLAELDHIAIDTTNTRVYFSEAKAG------------RISSVTYDGQDRHYVLS 2017
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
PNGL R+++ADS D I+ +G
Sbjct: 2018 DGGRQPNGLAF--YGDRLFYADSAFDSIEVATING 2050
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 173/454 (38%), Gaps = 107/454 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNT-CHPTPLGA----------- 51
+C+ + VCDG DC +G+DE C+ +C C N C P
Sbjct: 194 QCIQKSWVCDGSKDCADGSDEPDTCEFKKCTANEFQCKNKRCQPRKFRCDYYDDCGDNSD 253
Query: 52 --LC---TCPPGE-------------ILSNDSVTCQD---MNECEQ---PGY-CSQMCTN 86
C CPPG+ L + S C D +C Q P C C
Sbjct: 254 EDECGEYRCPPGKWNCPGTGHCIDQLKLCDGSKDCADGADEQQCSQNLCPSLGCQAGCHP 313
Query: 87 TKGSYICSCNEGYVLEYDNH-TCKAINHSAAF-----LIISNRHSILVADLEEKGKDHRA 140
+ C+C GY L+ H TC IN A F L ++R + L +
Sbjct: 314 SPHGGECTCPSGYKLDDRFHRTCSDINECAEFGYCDQLCANHRPGFTCSCLGD------- 366
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
L + G D + Y + + +++++ V ++ + + L+
Sbjct: 367 ----CFTLQMEHGPGKDNLTMRGYCVSNNADKMKL--------FVARREGLYR-----LN 409
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD---- 256
P + GE I I D +R KI+W + L + AD
Sbjct: 410 PKNPDEEVKKLASGE--FIYGIDFDYGDR------KIFWTDRLA-----HSAFSADVDDE 456
Query: 257 ---SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
S++ + KSL + I LY I+ G +I ++ DG ++L++
Sbjct: 457 GEISQIKKLSLKSLVYPRCLAVDWITNTLYIIESGSR----RIDVSSYDGERRTVLLADG 512
Query: 314 LYEAL--ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
L L ALD G ++++ ++E MDG+NR T+++T + +
Sbjct: 513 LTLPLDIALDPLRGEMFFTN--------------QLKLEAAAMDGTNRRTLVNTHTHQVS 558
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
G+ +DI +RVY+ D K+D ++ +Y G R+ V
Sbjct: 559 GIVVDITAKRVYWVDPKVDRLESIDYQGNDRRIV 592
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 63/111 (56%), Gaps = 11/111 (9%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
+Y+I+ +++ K +DG+ IL++ + ++ ++ +R+L+W
Sbjct: 2217 MYFINHDAERTNIEVSK--LDGTYRKILLTTKTETPSSIAVD---------PVSRYLYWA 2265
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
D G+ P I+R +DGS R I+S+ I P L +D+A++ +Y++D+K+D I
Sbjct: 2266 DQGQKPTIQRSFLDGSRREVIVSSGIAEPTDLVVDVASKMIYWSDAKMDGI 2316
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 76/187 (40%), Gaps = 47/187 (25%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
+ + DW+ IY+ R ++ D G + +A + T + +DP G LFW
Sbjct: 2531 ISDMKLDWLTQKIYFTTGRGGKVMAIDTAGEHLSTIASGDWTY--ALAIDPCSG--LLFW 2586
Query: 211 TDWGEN-------PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+D G PRIER + G +R I+S I P + +D +++Y+AD
Sbjct: 2587 SDSGYKTSGGLYEPRIERSNLAGGSRKVIVSESISLPAAIAVDFRNQKIYWAD------- 2639
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
VN L I A+ DG N ++ SG Y A +LD+
Sbjct: 2640 ---------VNR------------------LNIEVADYDGQNRKVIASG--YRAKSLDIW 2670
Query: 324 NGMLYYS 330
+ LY S
Sbjct: 2671 DRWLYMS 2677
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
R+ F SK K + +++ + +K+Y+ G G + I A G + S +
Sbjct: 2514 RLVFGASKQPHA--KEIRHISDMKLDWLTQKIYFT-TGRGGKVMAIDTA---GEHLSTIA 2567
Query: 311 SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN-------PRIERIGMDGSNRSTII 363
SG ALA+D C+ LFW+D G PRIER + G +R I+
Sbjct: 2568 SGDWTYALAID-----------PCSGLLFWSDSGYKTSGGLYEPRIERSNLAGGSRKVIV 2616
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
S I P + +D +++Y+AD I+ +YDG R+ +
Sbjct: 2617 SESISLPAAIAVDFRNQKIYWADVNRLNIEVADYDGQNRKVI 2658
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 9/141 (6%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI----VLAKDNITQ-- 193
A ++V+ D + +++DWI +Y++D+ N +EV T + ++ + IT+
Sbjct: 788 AAPVLVTHNDGLFSMSFDWISKQLYYVDNIRNSLEVVKIGETGLVHPDELVRRQLITELR 847
Query: 194 -PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P +++ P G LF+ + I R +DG N I +T + P+ + +D A R+
Sbjct: 848 DPVSVVVHPWKG--LLFYAEAMRPAAIYRCHIDGQNCQVIRNTTLGRPSEMAIDFAENRL 905
Query: 253 YFADSKLDFIDCKSLEIKTNV 273
+ D+ L I C + K V
Sbjct: 906 CWGDTLLKTISCMDFDGKNVV 926
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWG---ENPRIERIGMDGSNRSTIISTKIYWPNGL 373
A+A+D + G ++FW D G + ++ R G+DGSN I S + + +
Sbjct: 1935 AIAVDADKG-----------YVFWLDRGGGAADAKVARAGLDGSNPLVIASNDLAELDHI 1983
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+D RVYF+++K I YDG R V+
Sbjct: 1984 AIDTTNTRVYFSEAKAGRISSVTYDGQDRHYVL 2016
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 272 NVNYSTIFRKLYWIDEGGNGVPL-KIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
++++ I ++LY++D N + + KIG+ + + LV QL L + + +
Sbjct: 801 SMSFDWISKQLYYVDNIRNSLEVVKIGETGL--VHPDELVRRQLITELRDPVSVVVHPWK 858
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 390
L LF+ + I R +DG N I +T + P+ + +D A R+ + D+ L
Sbjct: 859 GL-----LFYAEAMRPAAIYRCHIDGQNCQVIRNTTLGRPSEMAIDFAENRLCWGDTLLK 913
Query: 391 FIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYY 438
I ++DG + V+ +D+ DN +P +A+ + N +YY
Sbjct: 914 TISCMDFDG---KNVVKLDI----------DNPIP-VAITIMNEYIYY 947
>gi|297471646|ref|XP_002685354.1| PREDICTED: low-density lipoprotein receptor-related protein 2 [Bos
taurus]
gi|296490675|tpg|DAA32788.1| TPA: low-density lipoprotein receptor-related protein 2-like [Bos
taurus]
Length = 4680
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 128/370 (34%), Positives = 189/370 (51%), Gaps = 61/370 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCDG +DCP G DE P C+ C G C++ C P GA C CP G +L ND
Sbjct: 1361 CVNLSAVCDGVSDCPGGTDESPLCNQNSCSDSNGGCTHQCIQGPYGAQCQCPLGYLLGND 1420
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++EC PG+CSQ C N +GS+ C C+ Y L+ D TCKA S L+++++
Sbjct: 1421 SKTCEDIDECRTPGFCSQYCYNMRGSFRCWCDSEYTLDADRRTCKAT-ESETLLLVASQS 1479
Query: 125 SILVADLEEKGK------DHRAQDIVV--------------------------------- 145
++ ++ + G H + + V
Sbjct: 1480 QLVAGNMTQNGYFVYPVIQHGSHIVAVDFDSVSGRIFWSDGTQGKIWSAFQNGTDKKLIL 1539
Query: 146 -SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
SG+ + +A DWIG ++YW D L I+V +G+++ VL +NIT G+ +DP
Sbjct: 1540 DSGVSMTGSIAVDWIGRNLYWTDISLRTIDVAKLDGSHKTVLISENITNLGGLAVDPRAT 1599
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID- 263
R +FW+DWG +PRIER MDGS R+ I+ KIYWPNGL LD R +YF D LD++D
Sbjct: 1600 DRVMFWSDWGSHPRIERASMDGSQRTIIVQEKIYWPNGLALDYPNRLLYFMDGYLDYLDF 1659
Query: 264 ------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM-DGSNASILV 310
L ++ + S +YW D + ++ KAN G N S+++
Sbjct: 1660 CHYDGSNRRQVIASDLILRHPYSISLFEDTVYWSDRATH----EVMKANKWHGGNQSVVM 1715
Query: 311 SGQLYEALAL 320
+ L++ L +
Sbjct: 1716 T--LHQPLGI 1723
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 193/387 (49%), Gaps = 77/387 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+C+ ++KVCDG DCP G DE G CD+ C G C CH +P G +C CP G
Sbjct: 314 KCIPISKVCDGTLDCPGGEDESNITAGQQCDVNLCP-SLG-CEYQCHRSPGGGMCYCPSG 371
Query: 59 EILS-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I++ N + C D ++C+ G C Q+C + G + C+C EGYVLE H + AF
Sbjct: 372 FIVNQNRTNNCVDFDDCQIWGVCDQLCEDRIGHHRCNCVEGYVLERQKHCRANSSFGEAF 431
Query: 118 LIISNRHSIL-----------VADLEEKG-----------------------------KD 137
+I SN ++L +A+ + +G
Sbjct: 432 VIFSNGRNLLKGSIRGNNFQILAESQNRGLAVGVDFHYRLRRVFWTDIVQKKVFSVDISG 491
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
R ++++ ++ E LA DW+ +Y +++R+N I+V D +G++RI L + + PRG+
Sbjct: 492 SRIREVLGVSIEDPENLAVDWVNNKLYIVETRVNCIDVVDLDGSHRITLISEYLGHPRGI 551
Query: 198 MLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
+DP+ G +LF++DW PRIER MDGSNR +++TK+ WP G+TLD+ ++RVY+
Sbjct: 552 AVDPTVG--YLFFSDWQNVFGVPRIERAYMDGSNRKDLVTTKLGWPGGITLDLVSKRVYW 609
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG-------SNAS 307
DS+ D+I+ V Y + R + GG +P + +G + +
Sbjct: 610 VDSRFDYIE--------TVTYDGLKRMT--VIHGGADIPHPFSISLFEGQLFFTDWTKMA 659
Query: 308 ILVSGQLYEALALDLENGMLYY-STLK 333
+L + + E N LYY S+LK
Sbjct: 660 VLKANKFKET------NPRLYYRSSLK 680
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 154/312 (49%), Gaps = 51/312 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHK-FGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ + KVC+ DC + +DE GC + EC C+ C T C+C PG L +
Sbjct: 3116 CIEMMKVCNNFPDCSDNSDEK-GCGINECNDPTLSGCNQNCTDTLTSFYCSCNPGYKLLS 3174
Query: 64 DSVTCQDMNECEQ-PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE+ P CSQ C N G+YIC C GY+ E D TC+ ++ LI SN
Sbjct: 3175 DKRTCVDIDECEETPFVCSQKCENLPGTYICKCAPGYIREPDGKTCRQNSNIEPDLIFSN 3234
Query: 123 RHSI-------------------LVA-------------DLEEKGKDH------RAQDIV 144
R+ + +VA D+E K + + ++
Sbjct: 3235 RYYLRNLTVYGHLYSLILQGLGNVVALDFDRVEKRLYWLDIENKVIERMFVNTTNRETVL 3294
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPRG 196
L E LA DW+ +YW+DS LN + V D NG R LA+ + PRG
Sbjct: 3295 KYNLPGAESLAVDWVTRKLYWVDSYLNCLSVSDLNGRYRRKLAEHCVDANNTFCFENPRG 3354
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ L P G ++W DWG+ I R+GMDG+ +S IISTKI WPNGLT+D +Y+AD
Sbjct: 3355 LALHPRYGH--VYWADWGDRAYIGRVGMDGTLKSLIISTKIMWPNGLTIDYTNDLLYWAD 3412
Query: 257 SKLDFIDCKSLE 268
+ L +I+ LE
Sbjct: 3413 AHLGYIEFSDLE 3424
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 172/367 (46%), Gaps = 75/367 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGA-LCTCPPG-EI 60
RC+ +VCD DC + DE GC+ + + LC + C G +C+C PG +
Sbjct: 3969 RCIPQHRVCDHVNDCGDNFDET-GCNTGKDRSCAENLCEHNCTQLREGGFICSCRPGFKP 4027
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK-AINHSAAFLI 119
S D C+D+NEC Q G C Q+C NTKGSY CSC EG+ D + + A + S L+
Sbjct: 4028 NSIDRNLCEDINECMQFGSCPQICHNTKGSYECSCAEGFTSLSDRYGERCAADGSPPLLL 4087
Query: 120 IS--------NRHSILVADLEEKGKDHRAQD----------------------------- 142
+ N S+ ++ E + +A D
Sbjct: 4088 LPENVRIRKYNLSSLQFSEYLEDQERIKAMDYDWDPEGTGLSVVYYTVLGEGSNSGAIKR 4147
Query: 143 -------------IVVSGLDL-----VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
++ LDL +GLA DW+G HIYW D+R RIEV + +G R
Sbjct: 4148 AYIPNFESGSNNPVMEINLDLKYIVQPDGLAVDWVGRHIYWSDARRQRIEVAELDGRYRK 4207
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L + QP ++++P G +++WTDWGENP+IE MDG R ++ + WP GL
Sbjct: 4208 WLISTELGQPAAIVVNPKLG--FMYWTDWGENPKIESAWMDGQRRKVLVQEDLGWPTGLC 4265
Query: 245 LD-IATRRVYFADSKLDFIDC-------KSLEIKTNVN-YS-TIFR-KLYWI--DEGGNG 291
+D + R+Y++D K + ++ + + + + VN YS IF +LYW D+G
Sbjct: 4266 IDYMNGDRIYWSDLKDNIVETIKYDGTDRRIVVTSAVNPYSLDIFESQLYWTSKDKGEVW 4325
Query: 292 VPLKIGK 298
+ K G+
Sbjct: 4326 IQDKFGR 4332
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 78/126 (61%), Gaps = 4/126 (3%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+VVSG+ EG+A+DWI IY+ D I+ +G+ ++A+ + +PRG++LDP
Sbjct: 2491 VVVSGIGSPEGIAFDWINKRIYYSDYTNQMIKSIATDGSRHTLIAQ--VPKPRGIVLDPC 2548
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWG N +IE M G +R +++ + WPNGLTLD +Y+AD+ L+ I
Sbjct: 2549 QG--YMYWTDWGTNAKIEMATMGGYSRRSLVDRGLVWPNGLTLDYEQNLIYWADANLEKI 2606
Query: 263 DCKSLE 268
+ LE
Sbjct: 2607 ERMDLE 2612
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 122/267 (45%), Gaps = 59/267 (22%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G+ L D+ TC N +F+++S + HS
Sbjct: 2060 CQQICLPVPGRLFSCACATGFKLNPDHQTCSPYN---SFIVVSTLRTIRGFSLQLSDHSE 2116
Query: 127 LVADLEEKGKDHRAQDIVVS-------------------------------------GLD 149
+ + G++ D+ VS G++
Sbjct: 2117 AMVPVAGPGRNALHVDVDVSSGFIYWCDFNISVASNNAIRRIKPDGSNFTNIVTDGIGVN 2176
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ G++Y+ ++ + IEV N T+R +L K + PR +++DP R+
Sbjct: 2177 GVRGIAVDWVAGNLYFTNAFRSETLIEVLRINTTHRHILLKTIVDMPRDIVVDPK--NRY 2234
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
LFW+D+G+NP+IER +D +NR+ ++S P GL LD ++ +Y+ D +D I S+
Sbjct: 2235 LFWSDYGQNPKIERSFLDCTNRTVLVSDITATPRGLALDHSSNYIYWVDDAVDLIARISI 2294
Query: 268 EIKTN--VNYSTIFRKLYWIDEGGNGV 292
E + + + + Y I GN +
Sbjct: 2295 EGGETEVIRFGSHYPAPYAITVFGNSI 2321
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 150/340 (44%), Gaps = 65/340 (19%)
Query: 80 CSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH 138
CS +C ++K Y C+C G+ L D+ TC + AFLI+ I L K
Sbjct: 1743 CSHLCLLSSKSLYSCACPSGWSLARDSVTC--VRDDQAFLIVVRNSIIFGISLNPDVKTF 1800
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDS--RLNRIEVCDENGTNRIVLAK-DNITQPR 195
+ +SG+ +A D+ IYWL++ ++R++ +GTNR V A ++
Sbjct: 1801 DGM-VPISGIRNGYDVAVDYSEQFIYWLENPGEIHRVKT---DGTNRTVFAPLSSLGASA 1856
Query: 196 GMMLDPSPGTRWLFWTDW-GENPRIERIGMDGSNRSTII-----STKIYWPNGLTLDIAT 249
+ LD +R L++TD + ++ + D S R T+I S + P G+T+D
Sbjct: 1857 SLALDWL--SRNLYFTDHVTRSIKVMTLQGDVSYRKTLIANDGTSLGVGLPVGITIDPIN 1914
Query: 250 RRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL 309
++Y++D + +G+P KI ANMDG + L
Sbjct: 1915 GKLYWSDRGTN-----------------------------SGLPPKIASANMDGKSPRTL 1945
Query: 310 VSGQLYEA--LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 367
+G L + LD+E LY++ IER +DG+NR I+ +
Sbjct: 1946 FTGSLENVAFITLDIEEQKLYWAV------------SSTGVIERGNVDGTNR-MILVNHL 1992
Query: 368 YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+P GL + R +Y++D + + I+ + TG +V+L
Sbjct: 1993 SYPWGLA--VHGRFLYYSDEEYEVIERVD-KATGANKVVL 2029
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 103/236 (43%), Gaps = 48/236 (20%)
Query: 78 GYCSQMCT------NTKGSYICSCNEGYVLEYDNHTCKAI-------------------- 111
G C +C N Y C C GY+ ++D++ C A
Sbjct: 704 GGCQHICVLSHRTFNGGLGYRCKCRLGYIPDWDDYHCVAAERFLLFSSNLAVRGIPLTLS 763
Query: 112 NHSAAFLIISNRHSILVA---DLEEKG---KDHRAQDIVVSGLD-------------LVE 152
+ + L ++ SI + D EK D + I LD V+
Sbjct: 764 HQTEVILPVTGSSSIFLGIDFDAREKAIFFSDTKKNIIYRQKLDGTGREIITANRVPAVQ 823
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
L++DWI ++YW DS + V +R + + N+ P+ +++ P+ G ++F++
Sbjct: 824 SLSFDWISRNLYWTDSSYRSVSVIRLGDKSRRTIIQ-NLNNPQSIVVHPTAG--YIFFSV 880
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
W +I R DGSN I++T + WP+GL++D ++ R+Y+ D+ D I+ L+
Sbjct: 881 WYRPAKILRAWADGSNILPIVNTTLGWPSGLSIDWSSSRLYWVDAFFDKIEHSKLD 936
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 141/354 (39%), Gaps = 61/354 (17%)
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
A++HS+ ++ + L+A + +G + +++ G A G I W+D
Sbjct: 2271 ALDHSSNYIYWVDDAVDLIARISIEGGE---TEVIRFGSHYPAPYAITVFGNSIIWVDRN 2327
Query: 170 LNRIEVC--DENGTNRIVLAKDNI------------TQPRGMM-------LDPSPG-TRW 207
L +I + N +R + +DNI QPR L+ + G ++
Sbjct: 2328 LKKILQASKEPNRADRPTVIRDNIDWLRDVTIFDQSVQPRSPAEVNNNPCLENNGGCAQF 2387
Query: 208 LFWTDWGENPRIERI--GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
F + P+ + + +S IS++ + L + + R D F
Sbjct: 2388 CFALPKSQTPKCDCAFGTLQADGKSCAISSENFLIFALDDSLRSLRFDPKDYSQPFPAIS 2447
Query: 266 SLEIKTNVNYSTIFRKLYWID--EGGNGVPLKIGKANMDGSNASILVSG-QLYEALALDL 322
+ ++Y +I ++Y+ G G I N S +++VSG E +A D
Sbjct: 2448 VERMAVALDYDSIDNRIYFTQLLPSGKGQISYI-NLNSRSSPPTVVVSGIGSPEGIAFDW 2506
Query: 323 ENGMLYYSTL------------------------------KCTRWLFWTDWGENPRIERI 352
N +YYS C +++WTDWG N +IE
Sbjct: 2507 INKRIYYSDYTNQMIKSIATDGSRHTLIAQVPKPRGIVLDPCQGYMYWTDWGTNAKIEMA 2566
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
M G +R +++ + WPNGLTLD +Y+AD+ L+ I+ + + R+ ++
Sbjct: 2567 TMGGYSRRSLVDRGLVWPNGLTLDYEQNLIYWADANLEKIERMDLEHYLREVIV 2620
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 87/186 (46%), Gaps = 29/186 (15%)
Query: 242 GLTLDIATRRVYFADSKLDFI-----DCKSLEIKT--------NVNYSTIFRKLYWIDEG 288
G+ D + ++F+D+K + I D EI T ++++ I R LYW D
Sbjct: 781 GIDFDAREKAIFFSDTKKNIIYRQKLDGTGREIITANRVPAVQSLSFDWISRNLYWTDSS 840
Query: 289 GNGVP-LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
V +++G D S +I+ + +++ + G +++S W
Sbjct: 841 YRSVSVIRLG----DKSRRTIIQNLNNPQSIVVHPTAGYIFFSV-----------WYRPA 885
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+I R DGSN I++T + WP+GL++D ++ R+Y+ D+ D I+ DG+ R+ +
Sbjct: 886 KILRAWADGSNILPIVNTTLGWPSGLSIDWSSSRLYWVDAFFDKIEHSKLDGSDRKALTN 945
Query: 408 IDLMVE 413
+ +
Sbjct: 946 VHQLTH 951
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMML 199
+ +V GL GL D+ IYW D+ L +IE D E+ +++++ N P G+ +
Sbjct: 2574 RSLVDRGLVWPNGLTLDYEQNLIYWADANLEKIERMDLEHYLREVIVSRAN--SPFGLAI 2631
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
++++WTD +DGS ++ + T + P G+
Sbjct: 2632 ----YGQYVYWTDLLTQKIYRANKVDGSGQTAVTVTLPFRPKGI 2671
>gi|358410887|ref|XP_003581862.1| PREDICTED: low-density lipoprotein receptor-related protein 2 [Bos
taurus]
Length = 4641
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/370 (34%), Positives = 189/370 (51%), Gaps = 61/370 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCDG +DCP G DE P C+ C G C++ C P GA C CP G +L ND
Sbjct: 1322 CVNLSAVCDGVSDCPGGTDESPLCNQNSCSDSNGGCTHQCIQGPYGAQCQCPLGYLLGND 1381
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++EC PG+CSQ C N +GS+ C C+ Y L+ D TCKA S L+++++
Sbjct: 1382 SKTCEDIDECRTPGFCSQYCYNMRGSFRCWCDSEYTLDADRRTCKAT-ESETLLLVASQS 1440
Query: 125 SILVADLEEKGK------DHRAQDIVV--------------------------------- 145
++ ++ + G H + + V
Sbjct: 1441 QLVAGNMTQNGYFVYPVIQHGSHIVAVDFDSVSGRIFWSDGTQGKIWSAFQNGTDKKLIL 1500
Query: 146 -SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
SG+ + +A DWIG ++YW D L I+V +G+++ VL +NIT G+ +DP
Sbjct: 1501 DSGVSMTGSIAVDWIGRNLYWTDISLRTIDVAKLDGSHKTVLISENITNLGGLAVDPRAT 1560
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID- 263
R +FW+DWG +PRIER MDGS R+ I+ KIYWPNGL LD R +YF D LD++D
Sbjct: 1561 DRVMFWSDWGSHPRIERASMDGSQRTIIVQEKIYWPNGLALDYPNRLLYFMDGYLDYLDF 1620
Query: 264 ------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM-DGSNASILV 310
L ++ + S +YW D + ++ KAN G N S+++
Sbjct: 1621 CHYDGSNRRQVIASDLILRHPYSISLFEDTVYWSDRATH----EVMKANKWHGGNQSVVM 1676
Query: 311 SGQLYEALAL 320
+ L++ L +
Sbjct: 1677 T--LHQPLGI 1684
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 154/312 (49%), Gaps = 51/312 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHK-FGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ + KVC+ DC + +DE GC + EC C+ C T C+C PG L +
Sbjct: 3077 CIEMMKVCNNFPDCSDNSDEK-GCGINECNDPTLSGCNQNCTDTLTSFYCSCNPGYKLLS 3135
Query: 64 DSVTCQDMNECEQ-PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE+ P CSQ C N G+YIC C GY+ E D TC+ ++ LI SN
Sbjct: 3136 DKRTCVDIDECEETPFVCSQKCENLPGTYICKCAPGYIREPDGKTCRQNSNIEPDLIFSN 3195
Query: 123 RHSI-------------------LVA-------------DLEEKGKDH------RAQDIV 144
R+ + +VA D+E K + + ++
Sbjct: 3196 RYYLRNLTVYGHLYSLILQGLGNVVALDFDRVEKRLYWLDIENKVIERMFVNTTNRETVL 3255
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPRG 196
L E LA DW+ +YW+DS LN + V D NG R LA+ + PRG
Sbjct: 3256 KYNLPGAESLAVDWVTRKLYWVDSYLNCLSVSDLNGRYRRKLAEHCVDANNTFCFENPRG 3315
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ L P G ++W DWG+ I R+GMDG+ +S IISTKI WPNGLT+D +Y+AD
Sbjct: 3316 LALHPRYGH--VYWADWGDRAYIGRVGMDGTLKSLIISTKIMWPNGLTIDYTNDLLYWAD 3373
Query: 257 SKLDFIDCKSLE 268
+ L +I+ LE
Sbjct: 3374 AHLGYIEFSDLE 3385
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 172/367 (46%), Gaps = 75/367 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGA-LCTCPPG-EI 60
RC+ +VCD DC + DE GC+ + + LC + C G +C+C PG +
Sbjct: 3930 RCIPQHRVCDHVNDCGDNFDET-GCNTGKDRSCAENLCEHNCTQLREGGFICSCRPGFKP 3988
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK-AINHSAAFLI 119
S D C+D+NEC Q G C Q+C NTKGSY CSC EG+ D + + A + S L+
Sbjct: 3989 NSIDRNLCEDINECMQFGSCPQICHNTKGSYECSCAEGFTSLSDRYGERCAADGSPPLLL 4048
Query: 120 IS--------NRHSILVADLEEKGKDHRAQD----------------------------- 142
+ N S+ ++ E + +A D
Sbjct: 4049 LPENVRIRKYNLSSLQFSEYLEDQERIKAMDYDWDPEGTGLSVVYYTVLGEGSNSGAIKR 4108
Query: 143 -------------IVVSGLDL-----VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
++ LDL +GLA DW+G HIYW D+R RIEV + +G R
Sbjct: 4109 AYIPNFESGSNNPVMEINLDLKYIVQPDGLAVDWVGRHIYWSDARRQRIEVAELDGRYRK 4168
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L + QP ++++P G +++WTDWGENP+IE MDG R ++ + WP GL
Sbjct: 4169 WLISTELGQPAAIVVNPKLG--FMYWTDWGENPKIESAWMDGQRRKVLVQEDLGWPTGLC 4226
Query: 245 LD-IATRRVYFADSKLDFIDC-------KSLEIKTNVN-YS-TIFR-KLYWI--DEGGNG 291
+D + R+Y++D K + ++ + + + + VN YS IF +LYW D+G
Sbjct: 4227 IDYMNGDRIYWSDLKDNIVETIKYDGTDRRIVVTSAVNPYSLDIFESQLYWTSKDKGEVW 4286
Query: 292 VPLKIGK 298
+ K G+
Sbjct: 4287 IQDKFGR 4293
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 78/126 (61%), Gaps = 4/126 (3%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+VVSG+ EG+A+DWI IY+ D I+ +G+ ++A+ + +PRG++LDP
Sbjct: 2452 VVVSGIGSPEGIAFDWINKRIYYSDYTNQMIKSIATDGSRHTLIAQ--VPKPRGIVLDPC 2509
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWG N +IE M G +R +++ + WPNGLTLD +Y+AD+ L+ I
Sbjct: 2510 QG--YMYWTDWGTNAKIEMATMGGYSRRSLVDRGLVWPNGLTLDYEQNLIYWADANLEKI 2567
Query: 263 DCKSLE 268
+ LE
Sbjct: 2568 ERMDLE 2573
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 122/267 (45%), Gaps = 59/267 (22%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G+ L D+ TC N +F+++S + HS
Sbjct: 2021 CQQICLPVPGRLFSCACATGFKLNPDHQTCSPYN---SFIVVSTLRTIRGFSLQLSDHSE 2077
Query: 127 LVADLEEKGKDHRAQDIVVS-------------------------------------GLD 149
+ + G++ D+ VS G++
Sbjct: 2078 AMVPVAGPGRNALHVDVDVSSGFIYWCDFNISVASNNAIRRIKPDGSNFTNIVTDGIGVN 2137
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ G++Y+ ++ + IEV N T+R +L K + PR +++DP R+
Sbjct: 2138 GVRGIAVDWVAGNLYFTNAFRSETLIEVLRINTTHRHILLKTIVDMPRDIVVDPK--NRY 2195
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
LFW+D+G+NP+IER +D +NR+ ++S P GL LD ++ +Y+ D +D I S+
Sbjct: 2196 LFWSDYGQNPKIERSFLDCTNRTVLVSDITATPRGLALDHSSNYIYWVDDAVDLIARISI 2255
Query: 268 EIKTN--VNYSTIFRKLYWIDEGGNGV 292
E + + + + Y I GN +
Sbjct: 2256 EGGETEVIRFGSHYPAPYAITVFGNSI 2282
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 150/340 (44%), Gaps = 65/340 (19%)
Query: 80 CSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH 138
CS +C ++K Y C+C G+ L D+ TC + AFLI+ I L K
Sbjct: 1704 CSHLCLLSSKSLYSCACPSGWSLARDSVTC--VRDDQAFLIVVRNSIIFGISLNPDVKTF 1761
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDS--RLNRIEVCDENGTNRIVLAK-DNITQPR 195
+ +SG+ +A D+ IYWL++ ++R++ +GTNR V A ++
Sbjct: 1762 DGM-VPISGIRNGYDVAVDYSEQFIYWLENPGEIHRVKT---DGTNRTVFAPLSSLGASA 1817
Query: 196 GMMLDPSPGTRWLFWTDW-GENPRIERIGMDGSNRSTII-----STKIYWPNGLTLDIAT 249
+ LD +R L++TD + ++ + D S R T+I S + P G+T+D
Sbjct: 1818 SLALDWL--SRNLYFTDHVTRSIKVMTLRGDVSYRKTLIANDGTSLGVGLPVGITIDPIN 1875
Query: 250 RRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL 309
++Y++D + +G+P KI ANMDG + L
Sbjct: 1876 GKLYWSDRGTN-----------------------------SGLPPKIASANMDGKSPRTL 1906
Query: 310 VSGQLYEA--LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 367
+G L + LD+E LY++ IER +DG+NR I+ +
Sbjct: 1907 FTGSLENVAFITLDIEEQKLYWAV------------SSTGVIERGNVDGTNR-MILVNHL 1953
Query: 368 YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+P GL + R +Y++D + + I+ + TG +V+L
Sbjct: 1954 SYPWGLA--VHGRFLYYSDEEYEVIERVD-KATGANKVVL 1990
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 48/236 (20%)
Query: 78 GYCSQMCT------NTKGSYICSCNEGYVLEYDNHTCKAI-------------------- 111
G C +C N Y C C GY+ ++D++ C A
Sbjct: 665 GGCQHICVLSHRTFNGGLGYRCKCRLGYIPDWDDYHCVAAERFLLFSSNLAVRGIPLTLS 724
Query: 112 NHSAAFLIISNRHSILVA---DLEEKG---KDHRAQDIVVSGLD-------------LVE 152
+ + L ++ SI + D EK D + I LD V+
Sbjct: 725 HQTEVILPVTGSSSIFLGIDFDAREKAIFFSDTKKNIIYRQKLDGTGREIITANRVPAVQ 784
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
L++DWI ++YW DS + V +R + + N+ P+ +++ P+ G ++F++
Sbjct: 785 SLSFDWISRNLYWTDSSYRSVSVIRLGDKSRRTIIQ-NLNNPQSIVVHPTAG--YIFFSV 841
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
W +I R DGSN I++T + WP+GL++D ++ R+Y+ D+ D I+ +L+
Sbjct: 842 WYRPAKILRAWADGSNILPIVNTTLGWPSGLSIDWSSSRLYWVDAFFDKIEHSNLD 897
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 141/354 (39%), Gaps = 61/354 (17%)
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
A++HS+ ++ + L+A + +G + +++ G A G I W+D
Sbjct: 2232 ALDHSSNYIYWVDDAVDLIARISIEGGE---TEVIRFGSHYPAPYAITVFGNSIIWVDRN 2288
Query: 170 LNRI--EVCDENGTNRIVLAKDNI------------TQPRGMM-------LDPSPG-TRW 207
L +I + N +R + +DNI QPR L+ + G ++
Sbjct: 2289 LKKILQASKEPNRADRPTVIRDNIDWLRDVTIFDQSVQPRSPAEVNNNPCLENNGGCAQF 2348
Query: 208 LFWTDWGENPRIERI--GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
F + P+ + + +S IS++ + L + + R D F
Sbjct: 2349 CFALPKSQTPKCDCAFGTLQADGKSCAISSENFLIFALDDSLRSLRFDPKDYSQPFPAIS 2408
Query: 266 SLEIKTNVNYSTIFRKLYWID--EGGNGVPLKIGKANMDGSNASILVSG-QLYEALALDL 322
+ ++Y +I ++Y+ G G I N S +++VSG E +A D
Sbjct: 2409 VERMAVALDYDSIDNRIYFTQLLPSGKGQISYI-NLNSRSSPPTVVVSGIGSPEGIAFDW 2467
Query: 323 ENGMLYYSTL------------------------------KCTRWLFWTDWGENPRIERI 352
N +YYS C +++WTDWG N +IE
Sbjct: 2468 INKRIYYSDYTNQMIKSIATDGSRHTLIAQVPKPRGIVLDPCQGYMYWTDWGTNAKIEMA 2527
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
M G +R +++ + WPNGLTLD +Y+AD+ L+ I+ + + R+ ++
Sbjct: 2528 TMGGYSRRSLVDRGLVWPNGLTLDYEQNLIYWADANLEKIERMDLEHYLREVIV 2581
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 88/186 (47%), Gaps = 29/186 (15%)
Query: 242 GLTLDIATRRVYFADSKLDFI-----DCKSLEIKT--------NVNYSTIFRKLYWIDEG 288
G+ D + ++F+D+K + I D EI T ++++ I R LYW D
Sbjct: 742 GIDFDAREKAIFFSDTKKNIIYRQKLDGTGREIITANRVPAVQSLSFDWISRNLYWTDSS 801
Query: 289 GNGVP-LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
V +++G D S +I+ + +++ + G +++S W
Sbjct: 802 YRSVSVIRLG----DKSRRTIIQNLNNPQSIVVHPTAGYIFFSV-----------WYRPA 846
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+I R DGSN I++T + WP+GL++D ++ R+Y+ D+ D I+ N DG+ R+ +
Sbjct: 847 KILRAWADGSNILPIVNTTLGWPSGLSIDWSSSRLYWVDAFFDKIEHSNLDGSDRKALTN 906
Query: 408 IDLMVE 413
+ +
Sbjct: 907 VHQLTH 912
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+C+ ++KVCDG DCP G DE G CD+ C G C CH +P G +C CP G
Sbjct: 314 KCIPISKVCDGTLDCPGGEDESNITAGQQCDVNLCP-SLG-CEYQCHRSPGGGMCYCPSG 371
Query: 59 EILSND 64
I++ +
Sbjct: 372 FIVNQN 377
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 12/107 (11%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLA-----ECKHKFGLCSNTCHPTPLGALC----TC 55
C+ + VCDG++DC + ADE GC+ EC C + P+ +C C
Sbjct: 270 CIAQSWVCDGESDCVDNADED-GCESKINRTFECYPNEWACPKSGKCIPISKVCDGTLDC 328
Query: 56 PPGEILSNDSVTCQ-DMNECEQPGYCSQMCTNTKGSYICSCNEGYVL 101
P GE SN + Q D+N C G C C + G +C C G+++
Sbjct: 329 PGGEDESNITAGQQCDVNLCPSLG-CEYQCHRSPGGGMCYCPSGFIV 374
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK-DNITQPRGMMLDP 201
IV + L GL+ DW +YW+D+ ++IE + +G++R L +T P G+ +
Sbjct: 861 IVNTTLGWPSGLSIDWSSSRLYWVDAFFDKIEHSNLDGSDRKALTNVHQLTHPFGLAV-- 918
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+++ TDW I R G +S I+ + +
Sbjct: 919 --SQDYIYVTDWRRG--IIRFGKYNPGQSIILRSGV 950
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMML 199
+ +V GL GL D+ IYW D+ L +IE D E+ +++++ N P G+ +
Sbjct: 2535 RSLVDRGLVWPNGLTLDYEQNLIYWADANLEKIERMDLEHYLREVIVSRAN--SPFGLAI 2592
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
++++WTD +DGS ++ + T + P G+
Sbjct: 2593 ----YGQYVYWTDLLTQKIYRANKVDGSGQTAVTVTLPFRPKGI 2632
>gi|268562860|ref|XP_002638687.1| Hypothetical protein CBG11882 [Caenorhabditis briggsae]
Length = 4759
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 123/299 (41%), Positives = 158/299 (52%), Gaps = 43/299 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ L ++CDGK CP G DEG C C C+ CH +P G +C+CP GE L N
Sbjct: 1378 CIPLHQLCDGKRHCPGGTDEGGRCGRDLCSADRAGCAFKCHNSPNGPICSCPQGEQLVN- 1436
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI-NHSAAFLIISNR 123
C+ NEC CSQ C + K + CSC EGY L+ + TCK N + +SNR
Sbjct: 1437 KTKCEPENECLDASSCSQHCKDEKHGFTCSCEEGYELDANKRTCKVQDNVKDTRIYVSNR 1496
Query: 124 HSILVAD--------------------------------------LEEKGKDHRAQDIVV 145
+ I +D L A +
Sbjct: 1497 NRIYYSDHKLDNWHTFGAVVENAIALAWDSLTDRIYWSDIREKKILSANRNGTNATVFIS 1556
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPG 204
GLD+ EG+A DW+G ++YW+DS LN IEV + E+ R +L NI+QPRG+ +DP G
Sbjct: 1557 DGLDITEGIALDWVGRNLYWVDSSLNTIEVANLEDPKQRTLLVHQNISQPRGIAVDPRKG 1616
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+FWTDWG+NP IER MDGS+R I+ TKIYWPN + LD+ T RVYFADSKLDFID
Sbjct: 1617 V--MFWTDWGQNPCIERASMDGSDRQIIVKTKIYWPNTIALDLTTNRVYFADSKLDFID 1673
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 178/428 (41%), Gaps = 123/428 (28%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGL---CSNTCHPTPLGALCTCPPGEI 60
C+ K+CDG DC +GADE +C C CHP+P G CTCP G
Sbjct: 279 HCIEQLKLCDGSKDCADGADE------QQCSQNLCPSLGCQAGCHPSPHGGECTCPSGYK 332
Query: 61 LSND-SVTCQDMNECEQPGYCSQMCTNTKGSYICSC-NEGYVLEYDNHT----------C 108
L + TC D+NEC + GYC Q+C N + + CSC + + L+ D+ C
Sbjct: 333 LDDRFHRTCSDINECAEFGYCDQLCANHRPGFTCSCLGDCFTLQMDHGPGKDNLTMRGYC 392
Query: 109 KAINHSAAFLIISNR-------------------------------------------HS 125
+ N L ++ R HS
Sbjct: 393 ISNNADKMKLFVARREGLYRLNPKNPDEEVKKLASGEFIYGIDFDYGDRKIFWTDRLAHS 452
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
AD++++G+ + + + + L LA DWI +Y ++S RI+V +G R V
Sbjct: 453 AFSADVDDEGEISQIKKLSLKSLVYPRCLAVDWITNTLYIIESGSRRIDVSSYDGDRRTV 512
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
L D +T P + LDP G +F+T+ +IE MDG+NR T+++T + +G+ +
Sbjct: 513 LLADGLTLPLDIALDPLRGE--MFFTN---QLKIEAAAMDGTNRRTLVNTHTHQVSGIVV 567
Query: 246 DIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305
DI +RVY+ D K+D ++ +++Y R++ + +G N VP G A D
Sbjct: 568 DITAKRVYWVDPKVDRLE--------SIDYQGNDRRI--VAQGMNTVPHPFGLALFD--- 614
Query: 306 ASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE--NPRIERIGMDGSNRSTII 363
++L+WTDW ++E+ G D
Sbjct: 615 ------------------------------QYLYWTDWTRLGVVQVEKFGSD-------- 636
Query: 364 STKIYWPN 371
TK+ W N
Sbjct: 637 -TKLLWSN 643
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 141/311 (45%), Gaps = 54/311 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++ KVCD DC + +DE C + EC + LC C +G C C G I
Sbjct: 3203 ECIDDAKVCDRNFDCGDRSDESSLCFIDECSLAEKPLCEQKCIDQKIGYKCDCFEGFAID 3262
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN-HSAAFLI 119
+D +C ++NEC E CSQ C + GSY C+C +GY L D+H+CK + F +
Sbjct: 3263 VSDQKSCHNVNECFEGISGCSQKCDDKIGSYKCACVDGYQLSSDDHSCKRVEMEPEPFFL 3322
Query: 120 ISNRHSILVADLEEKGKDHRAQ---DIVVSGLDL-------------------------- 150
++N+H I ++ + AQ ++V +DL
Sbjct: 3323 LANKHYIRKISMDGNKYELAAQGFDNVVSLDIDLTEKKAYLIDQGKLRLLRVNLDEMDSP 3382
Query: 151 --------------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
EG+A DW+G +Y L+ + I VC+ +G L +D I QP+
Sbjct: 3383 LSSYETVLRHNVYGTEGIAVDWVGRKLYMLNRQERSIRVCELDGRFCKTLIRDRIQQPKA 3442
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR-----STIISTKIYWPNGLTLDIATRR 251
+ + P G +LF+T+W P I R+ +DGS + + WPN + +D + R
Sbjct: 3443 IAIHPGKG--YLFFTEWSLQPYIGRMALDGSPELPDPIFKLAEHDLGWPNAIAIDYFSDR 3500
Query: 252 VYFADSKLDFI 262
+++ D+ L+ I
Sbjct: 3501 LFWGDAHLNEI 3511
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 177/464 (38%), Gaps = 95/464 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
+CVN T CD K DC + +DE GC E G C C G C C
Sbjct: 4065 KCVNATLACDRKDDCGDASDE-IGCSKHGGKTSCEAFGNNGGCKQICTDVRDGFYCHCRD 4123
Query: 58 GEILSNDSVT-CQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAA 116
G S C D++EC C+Q+C NTKGSY+C C+E Y
Sbjct: 4124 GFRPDPQSPKECIDIDECAGNNTCTQLCLNTKGSYLCRCHEDY----------------- 4166
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
++++V + GKD RA+ G A + + G DS L ++ +
Sbjct: 4167 ------ENNVVVGSM--TGKDCRAK-----------GDAANVMIG----ADSSLVQLSL- 4202
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 236
GTNR AK N + + P ++W D G I R + N+S
Sbjct: 4203 HGTGTNRHAAAKANDEDSDIIGIAFDPRKELMYWID-GSERTIYRSAISNGNQS------ 4255
Query: 237 IYWPNGLTLDIATRRVYFADSKLD------FIDCKSLEIKTNVNYSTIFRKLYWIDEGGN 290
+ L +D A V +D F+ S +++ + + R ID
Sbjct: 4256 -HEGQKLDIDFAGMGVVPTAIAVDYTTGNLFVAAVSEDVENGLVTARKKRMSEPIDNQNT 4314
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
G I A DG +V+G L + AL T + ++D G + +IE
Sbjct: 4315 GF---IFLALPDGRYVKKIVAGHLQQPTAL---------ITAPSAGRICYSDAGLHAKIE 4362
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIA-TRRVYFADSKLDFIDFCNYDGTGRQQVI--- 406
MDG++R I+ ++ P + +D R+Y+ D K +D N DGT R V+
Sbjct: 4363 CADMDGTHRQIIVKDLVFSPTSMAIDEGKNNRIYWVDPKYRRVDAVNIDGTDRTTVVHDK 4422
Query: 407 ----LIDLMVE------------FTNDLMGDNGVPALALDLENG 434
+D+ + D G V LA DLE+G
Sbjct: 4423 HIPYAVDVFENHIYWLSRESKTLYVQDKFGRGRVSVLASDLEDG 4466
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 96/193 (49%), Gaps = 18/193 (9%)
Query: 151 VEGLAYDWIGGHIYWL--DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
++ LA DWI ++Y++ D+ IEV +GT R +L P + +DP R+L
Sbjct: 2210 IKSLAIDWINYNMYFINHDAERTNIEVSKLDGTYRKILLTTKTETPSSIAVDPV--ARYL 2267
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI------ 262
+W D G+ P I+R +DGS R I+S+ I P L +D+A+R +Y++D+KLD I
Sbjct: 2268 YWADQGQKPSIQRAFLDGSRREVIVSSGIGEPTDLVVDVASRMIYWSDAKLDGIFRVRST 2327
Query: 263 ----DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
+ +I + + + +YW D K+ +A + S+L+S A
Sbjct: 2328 GGTPELVRSDIASAAGVALHGQNMYWTDNRLE----KLFRATSKPNQTSLLLSPTTVAAS 2383
Query: 319 ALDLENGMLYYST 331
D+ + ++ ST
Sbjct: 2384 LKDIGDVAVFSST 2396
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 127/329 (38%), Gaps = 55/329 (16%)
Query: 80 CSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK---G 135
CS +C N K ++ C C G L+ C ++ + FL+I + ++ +++ + G
Sbjct: 1761 CSHLCLLNNKNTFTCKCPMGEKLDGSGKKC--VDDAKPFLVIIQKTNVFGVEMDSRSPTG 1818
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
A + +SGL AYD + ++ L+ + + + I + N
Sbjct: 1819 TPDLAGMVPLSGLGNAFDAAYDALSEEMFILEHTNHAKTLAQITTDSAIYRSTVNGGNKT 1878
Query: 196 GMMLDPSPGTRWLFWTDW-GEN--------PRIERIGMDGSNRSTIISTKIYWPNGLTLD 246
M P + DW G N IE I G ++I + P +
Sbjct: 1879 KMFSSAVPDDAYCLGFDWNGRNLVVGNKVTQTIELIRTQGKQYRSVILSNDQSPTAVVTP 1938
Query: 247 IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
+ S+ + + Y ++W+D GG K+ +A +DGSN
Sbjct: 1939 V------------------SIAVDADKGY------VFWLDRGGGASDAKVARAGLDGSNP 1974
Query: 307 SILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
++ S L E +ALD N +Y+S K RI + DG +R ++S
Sbjct: 1975 LVIASNDLAELDHIALDTTNQRVYFSEAKAG------------RISSVTYDGQDRHYVLS 2022
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFID 393
PNGL R+++ADS D I+
Sbjct: 2023 DGGRQPNGLAF--HGDRLFYADSAFDSIE 2049
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 92/440 (20%), Positives = 170/440 (38%), Gaps = 69/440 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++ + CDG DC +G+DE C + C+ F C+N C P +
Sbjct: 3116 HCIHASWECDGDNDCLDGSDEHANCTYSSCQPDFWQCANH----------KCVPNSWRCD 3165
Query: 64 DSVTCQD---MNECEQPGYCSQMCTN-TKGSYICS---CNEGYVLEYDNHTCKAINHSAA 116
+ C+D +C + Q + +K + C+ C + + N C + ++
Sbjct: 3166 GNDDCEDGSDEKDCPKNSAAGQKTSKCSKSQFQCTSGECIDDAKVCDRNFDCGDRSDESS 3225
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGH-IYWLDSRLNRIEV 175
I E+K D + + D EG A D + ++ I
Sbjct: 3226 LCFIDECSLAEKPLCEQKCIDQK----IGYKCDCFEGFAIDVSDQKSCHNVNECFEGISG 3281
Query: 176 CDENGTNRI-----------VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGM 224
C + ++I L+ D+ + R + ++P P F+ I +I M
Sbjct: 3282 CSQKCDDKIGSYKCACVDGYQLSSDDHSCKR-VEMEPEP-----FFL-LANKHYIRKISM 3334
Query: 225 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADS-KLDFIDCKSLEIKTNVN-YSTIFRKL 282
DG N+ + + L +D+ ++ Y D KL + E+ + ++ Y T+ R
Sbjct: 3335 DG-NKYELAAQGFDNVVSLDIDLTEKKAYLIDQGKLRLLRVNLDEMDSPLSSYETVLRHN 3393
Query: 283 YWIDEG------------GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
+ EG N I +DG L+ ++ + A+ + G Y
Sbjct: 3394 VYGTEGIAVDWVGRKLYMLNRQERSIRVCELDGRFCKTLIRDRIQQPKAIAIHPGKGY-- 3451
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNR-----STIISTKIYWPNGLTLDIATRRVYFA 385
LF+T+W P I R+ +DGS + + WPN + +D + R+++
Sbjct: 3452 -------LFFTEWSLQPYIGRMALDGSPELPDPIFKLAEHDLGWPNAIAIDYFSDRLFWG 3504
Query: 386 DSKLDFIDFCNYDGTGRQQV 405
D+ L+ I F ++DG GR+ +
Sbjct: 3505 DAHLNEIGFMDFDGNGRRHI 3524
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 171/454 (37%), Gaps = 107/454 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNT-CHPTPLG------------ 50
+C+ + VCDG DC +G+DE C+ +C C N C P
Sbjct: 199 QCIQKSWVCDGSKDCADGSDEPETCEFKKCTANEFQCKNKRCQPRKFRCDYYDDCGDNSD 258
Query: 51 ----ALCTCPPG-----------EIL-----SNDSVTCQDMNECEQ---PGY-CSQMCTN 86
CPPG E L S D D +C Q P C C
Sbjct: 259 EEECGEYRCPPGKWNCPGTGHCIEQLKLCDGSKDCADGADEQQCSQNLCPSLGCQAGCHP 318
Query: 87 TKGSYICSCNEGYVLEYDNH-TCKAINHSAAF-----LIISNRHSILVADLEEKGKDHRA 140
+ C+C GY L+ H TC IN A F L ++R + L +
Sbjct: 319 SPHGGECTCPSGYKLDDRFHRTCSDINECAEFGYCDQLCANHRPGFTCSCLGD------- 371
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
L + G D + Y + + +++++ V ++ + + L+
Sbjct: 372 ----CFTLQMDHGPGKDNLTMRGYCISNNADKMKL--------FVARREGLYR-----LN 414
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD---- 256
P + GE I I D +R KI+W + L + AD
Sbjct: 415 PKNPDEEVKKLASGE--FIYGIDFDYGDR------KIFWTDRLA-----HSAFSADVDDE 461
Query: 257 ---SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
S++ + KSL + I LY I+ G +I ++ DG ++L++
Sbjct: 462 GEISQIKKLSLKSLVYPRCLAVDWITNTLYIIESGSR----RIDVSSYDGDRRTVLLADG 517
Query: 314 LYEAL--ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
L L ALD G ++++ +IE MDG+NR T+++T + +
Sbjct: 518 LTLPLDIALDPLRGEMFFTN--------------QLKIEAAAMDGTNRRTLVNTHTHQVS 563
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
G+ +DI +RVY+ D K+D ++ +Y G R+ V
Sbjct: 564 GIVVDITAKRVYWVDPKVDRLESIDYQGNDRRIV 597
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 62/111 (55%), Gaps = 11/111 (9%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
+Y+I+ +++ K +DG+ IL++ + ++ ++ R+L+W
Sbjct: 2222 MYFINHDAERTNIEVSK--LDGTYRKILLTTKTETPSSIAVD---------PVARYLYWA 2270
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
D G+ P I+R +DGS R I+S+ I P L +D+A+R +Y++D+KLD I
Sbjct: 2271 DQGQKPSIQRAFLDGSRREVIVSSGIGEPTDLVVDVASRMIYWSDAKLDGI 2321
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 87/223 (39%), Gaps = 58/223 (26%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
+ + DW+ IY+ R ++ V D G + +A + T + +DP G LFW
Sbjct: 2536 ISDMKLDWLTQKIYFTTGRGGKVMVIDAAGEHLSTIASGDWTY--ALAIDPCSG--LLFW 2591
Query: 211 TDWGEN-------PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+D G PRIER + G +R I+S I P +T+D + +Y+AD
Sbjct: 2592 SDSGYKTSGGLYEPRIERSNLAGGSRKVIVSESISLPAAITVDFRNQMIYWAD------- 2644
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
VN L I A+ +G N I+ SG Y A +LDL
Sbjct: 2645 ---------VNR------------------LNIEVADYNGENRKIIASG--YRAKSLDLW 2675
Query: 324 NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 366
+ RWL+ +D N GS ++S +
Sbjct: 2676 D-----------RWLYMSDPLSNGVFRIDKESGSGLENVVSNR 2707
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 89/223 (39%), Gaps = 56/223 (25%)
Query: 245 LDIATRRVYFA------------------DSKLDFIDCKSLEIKTNVNYSTIFRKLYWID 286
+D+ RRVYF + +L F K K + S + KL W+
Sbjct: 2488 VDVNLRRVYFVVESPIGVNISWFSMNNAENPRLVFGASKQAHAKEVRHISDM--KLDWLT 2545
Query: 287 EG---GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
+ G K+ + G + S + SG ALA+D C+ LFW+D
Sbjct: 2546 QKIYFTTGRGGKVMVIDAAGEHLSTIASGDWTYALAID-----------PCSGLLFWSDS 2594
Query: 344 GEN-------PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
G PRIER + G +R I+S I P +T+D + +Y+AD I+ +
Sbjct: 2595 GYKTSGGLYEPRIERSNLAGGSRKVIVSESISLPAAITVDFRNQMIYWADVNRLNIEVAD 2654
Query: 397 YDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYS 439
Y+G R+ + +G A +LDL + LY S
Sbjct: 2655 YNGENRKIIA---------------SGYRAKSLDLWDRWLYMS 2682
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 337 WLFWTDWG---ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
++FW D G + ++ R G+DGSN I S + + + LD +RVYF+++K I
Sbjct: 1949 YVFWLDRGGGASDAKVARAGLDGSNPLVIASNDLAELDHIALDTTNQRVYFSEAKAGRIS 2008
Query: 394 FCNYDGTGRQQVI 406
YDG R V+
Sbjct: 2009 SVTYDGQDRHYVL 2021
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 70/139 (50%), Gaps = 10/139 (7%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI----VLAKDNITQ---PR 195
++V+ D + +++DWI +Y++D+ N +EV T + ++ + +T+ P
Sbjct: 796 VLVTHNDGLFSMSFDWISKQLYYVDNIRNSLEVVKIGETGLVQPDELVRRQLLTELRDPV 855
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+++ P G LF+ + I + +DG+N I +T + P+ + +D R+ +
Sbjct: 856 SVVVHPWKG--LLFYAEAMRPAAIYKCHIDGTNCQVIRNTTLGRPSEMAIDFEEDRICWG 913
Query: 256 DSKLDFIDCKSLEIKTNVN 274
D+ L I C L+ K NVN
Sbjct: 914 DTLLKTISCMDLDGK-NVN 931
>gi|341886251|gb|EGT42186.1| hypothetical protein CAEBREN_28281 [Caenorhabditis brenneri]
Length = 4402
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/301 (40%), Positives = 159/301 (52%), Gaps = 43/301 (14%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
D C+ L ++CDGK CP G+DEG C C CS CH +P G +C+CP GE L
Sbjct: 963 DTCIPLHQLCDGKRHCPGGSDEGGRCARDLCSADRAGCSFKCHNSPNGPICSCPFGEQLV 1022
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI-NHSAAFLIIS 121
N C+ NEC CSQ C + K + C C+ GY L+ D TCK N + +S
Sbjct: 1023 N-KTKCEPENECLDASSCSQRCKDEKHGFTCFCDTGYELDADKRTCKVQENVKDTRIYVS 1081
Query: 122 NRHSILVAD--------------------------------------LEEKGKDHRAQDI 143
NR+ I +D L A
Sbjct: 1082 NRNRIYYSDHKLDNWHTFGAVVENAIALAWDSLTDRIYWSDIREKKILSANRNGTNATVF 1141
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPS 202
+ GLD+ EG+A DW+G ++YW+DS LN IEV + E+ R +L NI+QPRG+ +DP
Sbjct: 1142 ISDGLDITEGIALDWVGRNLYWVDSSLNTIEVANLEDPKQRTLLVHQNISQPRGIAVDPR 1201
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +FWTDWG+NP IER MDG++R I+ TKIYWPN + LD+ T RVYFADSKLDFI
Sbjct: 1202 KGV--MFWTDWGQNPCIERASMDGTDRQIIVKTKIYWPNTIALDLTTDRVYFADSKLDFI 1259
Query: 263 D 263
D
Sbjct: 1260 D 1260
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 142/311 (45%), Gaps = 54/311 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++ KVCD DC + +DE C + EC + LC C +G C C G I
Sbjct: 2844 ECIDDAKVCDRNFDCTDRSDESSLCFIDECSLAEKPLCEQKCIDQKIGYKCDCFEGFAID 2903
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA-AFLI 119
+D +C ++NEC E CSQ C + GSY C+C +GY+L D+H+CK + F +
Sbjct: 2904 VSDQKSCHNVNECFEGISGCSQKCDDKIGSYKCACVDGYLLSSDDHSCKRVEQEPEPFFL 2963
Query: 120 ISNRHSILVADLEEKGKDHRAQ---DIVVSGLDL-------------------------- 150
++N+H I ++ + AQ ++V +DL
Sbjct: 2964 LANKHYIRKISMDGNKYEMAAQGFDNVVSLDIDLTEKKAYLIDQGKLRLLRVNLDEMDSP 3023
Query: 151 --------------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
EG+A DW+G +Y L+ + I VC+ +G L +D I QP+
Sbjct: 3024 LSSYETVLRHNVYGTEGIAVDWVGRKLYMLNRQERSIRVCELDGRFCKTLIRDRIQQPKA 3083
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR-----STIISTKIYWPNGLTLDIATRR 251
+ + P G +LF+T+W P I R+ +DGS + + WPN + +D + R
Sbjct: 3084 IAIHPGKG--YLFFTEWSLQPYIGRMALDGSPELQDPIFKLAEHDLGWPNAIAIDYFSDR 3141
Query: 252 VYFADSKLDFI 262
+++ D+ L+ I
Sbjct: 3142 LFWGDAHLNEI 3152
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 118/464 (25%), Positives = 173/464 (37%), Gaps = 94/464 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD------LAECKHKFGLCSNTCHPTPLGAL-CTCP 56
CVN T CD K DC + +DE GC E G C +TC P G C C
Sbjct: 3706 HCVNATMACDRKDDCGDQSDE-VGCSKHGVKATCESAGSNGGCKHTCSDVPGGGYYCHCR 3764
Query: 57 PG-EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY-----VLEYDNHTCKA 110
G + C D++EC C+Q+C NTKGSY+C C+E Y V C+A
Sbjct: 3765 DGFRPDPQNPKECIDIDECAGNNTCTQLCLNTKGSYLCRCHEDYENNVVVGSMTGKDCRA 3824
Query: 111 INHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL 170
AA ++I S++ L G + A + + G+A+D +YW+D
Sbjct: 3825 -KGDAANVMIGADSSLVQLSLHGSGTNRHAAAKANDEDNDIIGIAFDPRKELMYWIDG-- 3881
Query: 171 NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS 230
E R +A N + G LD I+ GM
Sbjct: 3882 ------SERSIYRSAIANGNQSH-EGQKLD------------------IDFAGMG----- 3911
Query: 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN 290
P + +D T + F+ S I+ + + R ID
Sbjct: 3912 -------VVPTAIAVDYTTGNL--------FVAAVSENIENGLVTARKKRMSEPIDNQNT 3956
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
G I A DG +V+G L + AL T + ++D G + +IE
Sbjct: 3957 GF---IFVALPDGRYLKKIVAGHLQQPTAL---------VTAPTAGRICYSDAGLHAKIE 4004
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIAT-RRVYFADSKLDFIDFCNYDGTGRQQVI--- 406
MDG++R I+ ++ P + +D R+Y+ D K +D N DGT R V+
Sbjct: 4005 CADMDGTHRQIIVKDLVFSPTSMAVDEGKGNRIYWVDPKYRRVDAVNIDGTDRTTVVHDR 4064
Query: 407 ----LIDLMVE------------FTNDLMGDNGVPALALDLENG 434
+D+ + D G V LA DLE+G
Sbjct: 4065 HIPYAVDVFENHIYWLSRESKTLYVQDKFGRGRVSVLASDLEDG 4108
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Query: 151 VEGLAYDWIGGHIYWL--DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
++ LA DWI ++Y++ D+ IEV +GT R +L P + +DP R+L
Sbjct: 1870 IKSLAIDWINYNMYFINHDAERTNIEVSKLDGTFRKILLTTKTETPSSIAVDPV--GRYL 1927
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+W D G+ P I+R +DGS R I+ST I P L +D+A+R +Y++D+K+D I
Sbjct: 1928 YWADQGQKPSIQRSFLDGSRREVIVSTGIGEPTDLAVDVASRMIYWSDAKMDGI 1981
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 59/220 (26%)
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
LA DWI +Y ++S RI+V +G R VL D +T P + LDP G +F+T+
Sbjct: 31 LAVDWITNTLYIIESGSRRIDVSSYDGDRRTVLLADGLTLPLDIALDPLRGE--MFFTN- 87
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
+IE MDG+NR T+++T + +G+ +DI +RVY+ D K+D ++ ++
Sbjct: 88 --QLKIEAAAMDGTNRRTLVNTHTHQVSGIVVDITAKRVYWVDPKVDRLE--------SI 137
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
+Y R++ + +G N VP G A D
Sbjct: 138 DYQGNDRRI--VAQGMNVVPHPFGLALFD------------------------------- 164
Query: 334 CTRWLFWTDWGE--NPRIERIGMDGSNRSTIISTKIYWPN 371
++L+WTDW ++E+ G D TK+ W N
Sbjct: 165 --QYLYWTDWTRLGVIQVEKFGSD---------TKLLWSN 193
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 98/451 (21%), Positives = 169/451 (37%), Gaps = 110/451 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSN--TCHP------TPLGALC-- 53
C++ T CDG DC +G+DE C + C+ F C+N C P G+ C
Sbjct: 2776 HCIHSTWECDGDNDCLDGSDEHTNCTYSSCQPDFWQCANHKMCCPKNSAAGQKAGSKCGK 2835
Query: 54 ---TCPPGEILSNDSVT-----CQD---------MNEC---EQPGYCSQMCTNTKGSYIC 93
C GE + + V C D ++EC E+P C Q C + K Y C
Sbjct: 2836 NQYQCTSGECIDDAKVCDRNFDCTDRSDESSLCFIDECSLAEKP-LCEQKCIDQKIGYKC 2894
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEG 153
C EG D+ ++ H +
Sbjct: 2895 DCFEG----------------------------FAIDVSDQKSCHNVNE----------- 2915
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
++ I G D ++ + +G +L+ D+ + R ++ P +L
Sbjct: 2916 -CFEGISGCSQKCDDKIGSYKCACVDG---YLLSSDDHSCKR---VEQEPEPFFLL---- 2964
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS-KLDFIDCKSLEIKTN 272
I +I MDG N+ + + L +D+ ++ Y D KL + E+ +
Sbjct: 2965 ANKHYIRKISMDG-NKYEMAAQGFDNVVSLDIDLTEKKAYLIDQGKLRLLRVNLDEMDSP 3023
Query: 273 VN-YSTIFRKLYWIDEG------------GNGVPLKIGKANMDGSNASILVSGQLYEALA 319
++ Y T+ R + EG N I +DG L+ ++ + A
Sbjct: 3024 LSSYETVLRHNVYGTEGIAVDWVGRKLYMLNRQERSIRVCELDGRFCKTLIRDRIQQPKA 3083
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNR-----STIISTKIYWPNGLT 374
+ + G Y LF+T+W P I R+ +DGS + + WPN +
Sbjct: 3084 IAIHPGKGY---------LFFTEWSLQPYIGRMALDGSPELQDPIFKLAEHDLGWPNAIA 3134
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+D + R+++ D+ L+ I F ++DG GR+ +
Sbjct: 3135 IDYFSDRLFWGDAHLNEIGFMDFDGNGRRHI 3165
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 12/141 (8%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
+Y+I+ +++ K +DG+ IL++ + ++ ++ R+L+W
Sbjct: 1882 MYFINHDAERTNIEVSK--LDGTFRKILLTTKTETPSSIAVD---------PVGRYLYWA 1930
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D G+ P I+R +DGS R I+ST I P L +D+A+R +Y++D+K+D I G G
Sbjct: 1931 DQGQKPSIQRSFLDGSRREVIVSTGIGEPTDLAVDVASRMIYWSDAKMDGIYRVRSTG-G 1989
Query: 402 RQQVILIDLMVEFTNDLMGDN 422
+++ D+ L+G N
Sbjct: 1990 TPELVRTDIASAAGIALLGQN 2010
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 137/354 (38%), Gaps = 68/354 (19%)
Query: 90 SYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLD 149
++ C C G L+ C ++ + FL+I + ++ ++ G + V+SG+
Sbjct: 1387 TFTCKCPMGQKLDGSGKKC--VDDAKPFLVIIQKTNVFGIEMNNIGPNETP---VLSGMV 1441
Query: 150 LVEGLA------YDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ GL YD + ++ L+ + ++ ++ R + N T+ M
Sbjct: 1442 PLSGLGNAFDAVYDALSEEMFILEHTNHAKTLAQITTDSAIYRTTVNGGNKTK---MFSS 1498
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P + DW N R +G S II T+ G R V ++ +
Sbjct: 1499 TIPDDAYCLGFDW--NGRNLLVGNKVSQTIEIIRTQ----GGKQY----RSVILSNDQSP 1548
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--AL 318
+ + I + + +F W+D GG +K+ +A +DGS+ ++ S L E +
Sbjct: 1549 TAVIQPVSIAVDADKGYVF----WLDRGGGANDVKVARAGLDGSSPLVIASNDLAELDHI 1604
Query: 319 ALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGM----------------------- 354
ALD N +Y+S K R F + WG P+I+ + +
Sbjct: 1605 ALDTTNQRVYFSEAKAGRVSFGSAIWGWRPKIQILAVIILVSRNFFSTSTMHLAPASNHR 1664
Query: 355 ---------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
DG +R ++S PNGL R+++ADS D I+ G
Sbjct: 1665 NLQISSVTYDGQDRHYVLSDGGRQPNGLAF--HGDRLFYADSAFDSIEVATIAG 1716
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 20/130 (15%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL--ALDLENGMLYYSTLKCT 335
I LY I+ G +I ++ DG ++L++ L L ALD G ++++
Sbjct: 36 ITNTLYIIESGSR----RIDVSSYDGDRRTVLLADGLTLPLDIALDPLRGEMFFTN---- 87
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+IE MDG+NR T+++T + +G+ +DI +RVY+ D K+D ++
Sbjct: 88 ----------QLKIEAAAMDGTNRRTLVNTHTHQVSGIVVDITAKRVYWVDPKVDRLESI 137
Query: 396 NYDGTGRQQV 405
+Y G R+ V
Sbjct: 138 DYQGNDRRIV 147
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 75/187 (40%), Gaps = 47/187 (25%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
+ + DW+ IY+ R ++ D G + +A + T + +DP G LFW
Sbjct: 2196 ISDMKLDWLTQKIYFTTGRGGKVMAIDAAGEHLSTIASGDWTY--ALAIDPCSG--LLFW 2251
Query: 211 TDWGEN-------PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+D G PRIER + G +R I+S I P + +D + +Y+AD
Sbjct: 2252 SDSGYKTSGGLYEPRIERSNLAGGSRKVIVSESISLPAAIAVDFRNQMIYWAD------- 2304
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
VN L I A+ +G N I+ SG Y A +LD+
Sbjct: 2305 ---------VNR------------------LNIEVADYNGENRKIIASG--YRAKSLDIW 2335
Query: 324 NGMLYYS 330
+ LY S
Sbjct: 2336 DRWLYMS 2342
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 24/160 (15%)
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
R+ F SK K + +++ + +K+Y+ G G + I A G + S +
Sbjct: 2179 RLVFGASKQPHA--KEIRHISDMKLDWLTQKIYFT-TGRGGKVMAIDAA---GEHLSTIA 2232
Query: 311 SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN-------PRIERIGMDGSNRSTII 363
SG ALA+D C+ LFW+D G PRIER + G +R I+
Sbjct: 2233 SGDWTYALAID-----------PCSGLLFWSDSGYKTSGGLYEPRIERSNLAGGSRKVIV 2281
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403
S I P + +D + +Y+AD I+ +Y+G R+
Sbjct: 2282 SESISLPAAIAVDFRNQMIYWADVNRLNIEVADYNGENRK 2321
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 21/128 (16%)
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
+ +N+ I A ++ G + R +V + V G+ D +YW+D +++R+E D
Sbjct: 83 MFFTNQLKIEAAAMD--GTNRRT--LVNTHTHQVSGIVVDITAKRVYWVDPKVDRLESID 138
Query: 178 ENGTNRIVLAK--DNITQPRGMMLDPSPGTRWLFWTDWGE--NPRIERIGMDGSNRSTII 233
G +R ++A+ + + P G+ L ++L+WTDW ++E+ G D
Sbjct: 139 YQGNDRRIVAQGMNVVPHPFGLAL----FDQYLYWTDWTRLGVIQVEKFGSD-------- 186
Query: 234 STKIYWPN 241
TK+ W N
Sbjct: 187 -TKLLWSN 193
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 21/144 (14%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP----R 195
A ++V+ D + +++DWI +Y++D+ N +EV + + + + QP R
Sbjct: 343 AAPVLVTHNDGLFSMSFDWISKQLYYVDNIRNSLEV--------VKIGETGLVQPDELVR 394
Query: 196 GMML----DP-----SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 246
+L DP P LF+ + I + +DG+N I +T + P+ + +D
Sbjct: 395 RQLLTGLRDPVSVVVHPWKGLLFYAEAMRPAAIYKCHIDGTNCQVIRNTTLGRPSEMAID 454
Query: 247 IATRRVYFADSKLDFIDCKSLEIK 270
A R+ + D+ L I C + K
Sbjct: 455 FAENRLCWGDTLLKTISCMDFDGK 478
>gi|341901778|gb|EGT57713.1| CBN-LRP-1 protein [Caenorhabditis brenneri]
Length = 4759
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/301 (40%), Positives = 159/301 (52%), Gaps = 43/301 (14%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
D C+ L ++CDGK CP G+DEG C C CS CH +P G +C+CP GE L
Sbjct: 1373 DTCIPLHQLCDGKRHCPGGSDEGGRCARDLCSADRAGCSFKCHNSPNGPICSCPFGEQLV 1432
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI-NHSAAFLIIS 121
N C+ NEC CSQ C + K + C C+ GY L+ D TCK N + +S
Sbjct: 1433 N-KTKCEPENECLDASSCSQRCKDEKHGFTCFCDTGYELDADKRTCKVQENVKDTRIYVS 1491
Query: 122 NRHSILVAD--------------------------------------LEEKGKDHRAQDI 143
NR+ I +D L A
Sbjct: 1492 NRNRIYYSDHKLDNWHTFGAVVENAIALAWDSLTDRIYWSDIREKKILSANRNGTNATVF 1551
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPS 202
+ GLD+ EG+A DW+G ++YW+DS LN IEV + E+ R +L NI+QPRG+ +DP
Sbjct: 1552 ISDGLDITEGIALDWVGRNLYWVDSSLNTIEVANLEDPKQRTLLVHQNISQPRGIAVDPR 1611
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +FWTDWG+NP IER MDG++R I+ TKIYWPN + LD+ T RVYFADSKLDFI
Sbjct: 1612 KGV--MFWTDWGQNPCIERASMDGTDRQVIVKTKIYWPNTIALDLTTDRVYFADSKLDFI 1669
Query: 263 D 263
D
Sbjct: 1670 D 1670
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 179/428 (41%), Gaps = 123/428 (28%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGL---CSNTCHPTPLGALCTCPPGEI 60
C++ K+CDG DC +GADE +C C CHP+P G CTCP G
Sbjct: 276 HCIDQLKLCDGSKDCADGADE------QQCSQNLCPSLGCQAGCHPSPHGGECTCPSGYK 329
Query: 61 LSND-SVTCQDMNECEQPGYCSQMCTNTKGSYICSC-NEGYVLEYDNHT----------C 108
L + TC D+NEC + GYC Q+C N + + CSC + + L+ D+ C
Sbjct: 330 LDDRFHRTCSDINECAEFGYCDQLCANHRPGFTCSCLGDCFTLQMDHGPGKDNLTMRGYC 389
Query: 109 KAINHSAAFLIISNR-------------------------------------------HS 125
+ N L ++ R HS
Sbjct: 390 ISNNADKMKLFVARREGLYRLNPRNPDEEVKKLASGEFIYGIDFDYGDRKIFWTDRLAHS 449
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
AD++++G+ + + + + L LA DWI +Y ++S RI+V +G R V
Sbjct: 450 AFSADVDDEGEISQIKKLSLKSLVYPRCLAVDWITNTLYIIESGSRRIDVSSYDGDRRTV 509
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
L D +T P + LDP G +F+T+ +IE MDG+NR T+++T + +G+ +
Sbjct: 510 LLADGLTLPLDIALDPLRGE--MFFTN---QLKIEAAAMDGTNRRTLVNTHTHQVSGIVV 564
Query: 246 DIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305
DI +RVY+ D K+D ++ +++Y R++ + +G N VP G A D
Sbjct: 565 DITAKRVYWVDPKVDRLE--------SIDYQGNDRRI--VAQGMNVVPHPFGLALFD--- 611
Query: 306 ASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE--NPRIERIGMDGSNRSTII 363
++L+WTDW ++E+ G D
Sbjct: 612 ------------------------------QYLYWTDWTRLGVIQVEKFGSD-------- 633
Query: 364 STKIYWPN 371
TK+ W N
Sbjct: 634 -TKLLWSN 640
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 142/311 (45%), Gaps = 54/311 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++ KVCD DC + +DE C + EC + LC C +G C C G I
Sbjct: 3201 ECIDDAKVCDRNFDCTDRSDESSLCFIDECSLAEKPLCEQKCIDQKIGYKCDCFEGYAID 3260
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA-AFLI 119
+D +C ++NEC E CSQ C + GSY C+C +GY+L D+H+CK + F +
Sbjct: 3261 VSDQKSCHNVNECFEGISGCSQKCDDKIGSYKCACVDGYLLSSDDHSCKRVEQEPEPFFL 3320
Query: 120 ISNRHSILVADLEEKGKDHRAQ---DIVVSGLDL-------------------------- 150
++N+H I ++ + AQ ++V +DL
Sbjct: 3321 LANKHYIRKISMDGNKYEMAAQGFDNVVSLDIDLTEKKAYLIDQGKLRLLRVNLDEMDSP 3380
Query: 151 --------------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
EG+A DW+G +Y L+ + I VC+ +G L +D I QP+
Sbjct: 3381 LSSYETVLRHNVYGTEGIAVDWVGRKLYMLNRQERSIRVCELDGRFCKTLIRDRIQQPKA 3440
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR-----STIISTKIYWPNGLTLDIATRR 251
+ + P G +LF+T+W P I R+ +DGS + + WPN + +D + R
Sbjct: 3441 IAIHPGKG--YLFFTEWSLQPYIGRMALDGSPELQDPIFKLAEHDLGWPNAIAIDYFSDR 3498
Query: 252 VYFADSKLDFI 262
+++ D+ L+ I
Sbjct: 3499 LFWGDAHLNEI 3509
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 117/464 (25%), Positives = 172/464 (37%), Gaps = 94/464 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD------LAECKHKFGLCSNTCHPTPLGAL-CTCP 56
CVN T CD K DC + +DE GC E G C +TC G C C
Sbjct: 4063 HCVNATMACDRKDDCGDQSDE-VGCSKHGVKATCESAGSNGGCKHTCSDVVGGGYYCHCR 4121
Query: 57 PG-EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY-----VLEYDNHTCKA 110
G + C D++EC C+Q+C NTKGSY+C C+E Y V C+A
Sbjct: 4122 DGFRPDPQNPKECIDIDECAGNNTCTQLCLNTKGSYLCRCHEDYENNVVVGSMTGKDCRA 4181
Query: 111 INHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL 170
AA ++I S++ L G + A + + G+A+D +YW+D
Sbjct: 4182 -KGDAANVMIGADSSLVQLSLHGSGTNRHAAAKANDEDNDIIGIAFDPRKELMYWIDGS- 4239
Query: 171 NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS 230
E R +A N + G LD I+ GM
Sbjct: 4240 -------ERSIYRSAIANGNQSH-EGQKLD------------------IDFAGMG----- 4268
Query: 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN 290
P + +D T + F+ S I+ + + R ID
Sbjct: 4269 -------VVPTAIAVDYTTGNL--------FVAAVSENIENGLVTARKKRMSEPIDNQNT 4313
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
G I A DG +V+G L + AL T + ++D G + +IE
Sbjct: 4314 GF---IFVALPDGRYLKKIVAGHLQQPTAL---------VTAPTAGRICYSDAGLHAKIE 4361
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIAT-RRVYFADSKLDFIDFCNYDGTGRQQVI--- 406
MDG++R I+ ++ P + +D R+Y+ D K +D N DGT R V+
Sbjct: 4362 CADMDGTHRQIIVKDLVFSPTSMAVDEGKGNRIYWVDPKYRRVDAVNIDGTDRTTVVHDR 4421
Query: 407 ----LIDLMVE------------FTNDLMGDNGVPALALDLENG 434
+D+ + D G V LA DLE+G
Sbjct: 4422 HIPYAVDVFENHIYWLSRESKTLYVQDKFGRGRVSVLASDLEDG 4465
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Query: 151 VEGLAYDWIGGHIYWL--DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
++ LA DWI ++Y++ D+ IEV +GT R +L P + +DP R+L
Sbjct: 2207 IKSLAIDWINYNMYFINHDAERTNIEVSKLDGTFRKILLTTKTETPSSIAVDPV--GRYL 2264
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+W D G+ P I+R +DGS R I+ST I P L +D+A+R +Y++D+K+D I
Sbjct: 2265 YWADQGQKPSIQRSFLDGSRREVIVSTGIGEPTDLAVDVASRMIYWSDAKMDGI 2318
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 130/329 (39%), Gaps = 42/329 (12%)
Query: 80 CSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH 138
CS +C N K ++ C C G L+ C ++ + FL+I + ++ ++ G +
Sbjct: 1758 CSHLCLLNNKNTFTCKCPMGQKLDGSGKKC--VDDAKPFLVIIQKTNVFGIEMNNIGPNE 1815
Query: 139 RAQDIVVSGLDLVEGLA------YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
V+SG+ + GL YD + ++ L+ + + + I N
Sbjct: 1816 TP---VLSGMVPLSGLGNAFDAVYDALSEEMFILEHTNHAKTLAQITTDSAIYRTTVNGG 1872
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
M P + DW N R +G S II T+ G R V
Sbjct: 1873 NKTKMFSSTIPDDAYCLGFDW--NGRNLVVGNKVSQTIEIIRTQ----GGKQY----RSV 1922
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
++ + + + I + + +F W+D GG +K+ +A +DGS+ ++ S
Sbjct: 1923 ILSNDQSPTAVIQPVSIAVDADKGYVF----WLDRGGGANDVKVARAGLDGSSPLVIASN 1978
Query: 313 QLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 370
L E +ALD N +Y+S K RI + DG +R ++S P
Sbjct: 1979 DLAELDHIALDTTNQRVYFSEAKAG------------RISSVTYDGQDRHYVLSDGGRQP 2026
Query: 371 NGLTLDIATRRVYFADSKLDFIDFCNYDG 399
NGL R+++ADS D I+ G
Sbjct: 2027 NGLAF--HGDRLFYADSAFDSIEVATIAG 2053
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/441 (21%), Positives = 166/441 (37%), Gaps = 70/441 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++ T CDG DC +G+DE C + C+ F C+N C P +
Sbjct: 3113 HCIHATWECDGDNDCLDGSDEHTNCTYSSCQPDFWQCANH----------KCVPNAWRCD 3162
Query: 64 DSVTCQD---MNECEQPGYCSQMCTNTKGSYICSCNEGYVLEY-----DNHTCKAINHSA 115
+ C+D EC + Q + G C G ++ N C + +
Sbjct: 3163 GNDDCEDGSDEKECPKNSAAGQKAGSKCGKNQYQCTSGECIDDAKVCDRNFDCTDRSDES 3222
Query: 116 AFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGH-IYWLDSRLNRIE 174
+ I E+K D + + D EG A D + ++ I
Sbjct: 3223 SLCFIDECSLAEKPLCEQKCIDQK----IGYKCDCFEGYAIDVSDQKSCHNVNECFEGIS 3278
Query: 175 VCDENGTNRI-----------VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIG 223
C + ++I +L+ D+ + R ++ P +L I +I
Sbjct: 3279 GCSQKCDDKIGSYKCACVDGYLLSSDDHSCKR---VEQEPEPFFLL----ANKHYIRKIS 3331
Query: 224 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS-KLDFIDCKSLEIKTNVN-YSTIFRK 281
MDG N+ + + L +D+ ++ Y D KL + E+ + ++ Y T+ R
Sbjct: 3332 MDG-NKYEMAAQGFDNVVSLDIDLTEKKAYLIDQGKLRLLRVNLDEMDSPLSSYETVLRH 3390
Query: 282 LYWIDEG------------GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
+ EG N I +DG L+ ++ + A+ + G Y
Sbjct: 3391 NVYGTEGIAVDWVGRKLYMLNRQERSIRVCELDGRFCKTLIRDRIQQPKAIAIHPGKGY- 3449
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNR-----STIISTKIYWPNGLTLDIATRRVYF 384
LF+T+W P I R+ +DGS + + WPN + +D + R+++
Sbjct: 3450 --------LFFTEWSLQPYIGRMALDGSPELQDPIFKLAEHDLGWPNAIAIDYFSDRLFW 3501
Query: 385 ADSKLDFIDFCNYDGTGRQQV 405
D+ L+ I F ++DG GR+ +
Sbjct: 3502 GDAHLNEIGFMDFDGNGRRHI 3522
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 173/456 (37%), Gaps = 111/456 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNT-CHPTPLGA----------- 51
+C+ + VCDG DC +G+DE C+ +C C N C P
Sbjct: 196 QCIQKSWVCDGSKDCADGSDEPETCEFKKCTANEFQCKNKRCQPRKFRCDYYDDCGDNSD 255
Query: 52 --LC---TCPPGE-------------ILSNDSVTCQD---MNECEQ---PGY-CSQMCTN 86
C CPPG+ L + S C D +C Q P C C
Sbjct: 256 EEECGEYRCPPGKWNCPGTGHCIDQLKLCDGSKDCADGADEQQCSQNLCPSLGCQAGCHP 315
Query: 87 TKGSYICSCNEGYVLEYDNH-TCKAINHSAAF-----LIISNRHSILVADLEEKGKDHRA 140
+ C+C GY L+ H TC IN A F L ++R + L +
Sbjct: 316 SPHGGECTCPSGYKLDDRFHRTCSDINECAEFGYCDQLCANHRPGFTCSCLGD------- 368
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE--VCDENGTNRIVLAKDNITQPRGMM 198
L + G D + Y + + ++++ V G R+ PR
Sbjct: 369 ----CFTLQMDHGPGKDNLTMRGYCISNNADKMKLFVARREGLYRL--------NPR--- 413
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD-- 256
+P + L ++ I I D +R KI+W + L + AD
Sbjct: 414 -NPDEEVKKLASGEF-----IYGIDFDYGDR------KIFWTDRLA-----HSAFSADVD 456
Query: 257 -----SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
S++ + KSL + I LY I+ G +I ++ DG ++L++
Sbjct: 457 DEGEISQIKKLSLKSLVYPRCLAVDWITNTLYIIESGSR----RIDVSSYDGDRRTVLLA 512
Query: 312 GQLYEAL--ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYW 369
L L ALD G ++++ +IE MDG+NR T+++T +
Sbjct: 513 DGLTLPLDIALDPLRGEMFFTN--------------QLKIEAAAMDGTNRRTLVNTHTHQ 558
Query: 370 PNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+G+ +DI +RVY+ D K+D ++ +Y G R+ V
Sbjct: 559 VSGIVVDITAKRVYWVDPKVDRLESIDYQGNDRRIV 594
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 12/141 (8%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
+Y+I+ +++ K +DG+ IL++ + ++ ++ R+L+W
Sbjct: 2219 MYFINHDAERTNIEVSK--LDGTFRKILLTTKTETPSSIAVD---------PVGRYLYWA 2267
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D G+ P I+R +DGS R I+ST I P L +D+A+R +Y++D+K+D I G G
Sbjct: 2268 DQGQKPSIQRSFLDGSRREVIVSTGIGEPTDLAVDVASRMIYWSDAKMDGIYRVRSTG-G 2326
Query: 402 RQQVILIDLMVEFTNDLMGDN 422
+++ D+ L+G N
Sbjct: 2327 TPELVRTDIASAAGIALLGQN 2347
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 75/187 (40%), Gaps = 47/187 (25%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
+ + DW+ IY+ R ++ D G + +A + T + +DP G LFW
Sbjct: 2533 ISDMKLDWLTQKIYFTTGRGGKVMAIDTAGEHLSTIASGDWTY--ALAIDPCSG--LLFW 2588
Query: 211 TDWGEN-------PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+D G PRIER + G +R I+S I P + +D + +Y+AD
Sbjct: 2589 SDSGYKTSGGLYEPRIERSNLAGGSRKVIVSESISLPAAIAVDFRNQMIYWAD------- 2641
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
VN L I A+ +G N I+ SG Y A +LD+
Sbjct: 2642 ---------VNR------------------LNIEVADYNGENRKIIASG--YRAKSLDIW 2672
Query: 324 NGMLYYS 330
+ LY S
Sbjct: 2673 DRWLYMS 2679
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 24/160 (15%)
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
R+ F SK K + +++ + +K+Y+ G G + I A G + S +
Sbjct: 2516 RLVFGASKQPHA--KEIRHISDMKLDWLTQKIYFT-TGRGGKVMAIDTA---GEHLSTIA 2569
Query: 311 SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN-------PRIERIGMDGSNRSTII 363
SG ALA+D C+ LFW+D G PRIER + G +R I+
Sbjct: 2570 SGDWTYALAID-----------PCSGLLFWSDSGYKTSGGLYEPRIERSNLAGGSRKVIV 2618
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403
S I P + +D + +Y+AD I+ +Y+G R+
Sbjct: 2619 SESISLPAAIAVDFRNQMIYWADVNRLNIEVADYNGENRK 2658
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 21/144 (14%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP----R 195
A ++V+ D + +++DWI +Y++D+ N +EV + + + + QP R
Sbjct: 790 AAPVLVTHNDGLFSMSFDWISKQLYYVDNIRNSLEV--------VKIGETGLVQPDELVR 841
Query: 196 GMML----DP-----SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 246
+L DP P LF+ + I + +DG+N I +T + P+ + +D
Sbjct: 842 RQLLTGLRDPVSVVVHPWKGLLFYAEAMRPAAIYKCHIDGTNCQVIRNTTLGRPSEMAID 901
Query: 247 IATRRVYFADSKLDFIDCKSLEIK 270
A R+ + D+ L I C + K
Sbjct: 902 FAENRLCWGDTLLKTISCMDFDGK 925
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 337 WLFWTDWG---ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
++FW D G + ++ R G+DGS+ I S + + + LD +RVYF+++K I
Sbjct: 1947 YVFWLDRGGGANDVKVARAGLDGSSPLVIASNDLAELDHIALDTTNQRVYFSEAKAGRIS 2006
Query: 394 FCNYDGTGRQQVI 406
YDG R V+
Sbjct: 2007 SVTYDGQDRHYVL 2019
>gi|170578062|ref|XP_001894250.1| Low-density lipoprotein receptor-related protein [Brugia malayi]
gi|158599240|gb|EDP36913.1| Low-density lipoprotein receptor-related protein, putative [Brugia
malayi]
Length = 4043
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 163/301 (54%), Gaps = 43/301 (14%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
D C+ +CDGK CP G DEG C C C+ CH +P G LC+CP GE L
Sbjct: 1347 DICIPFHNLCDGKDHCPGGTDEGGRCARDLCAADRAGCAFKCHMSPDGPLCSCPFGEALV 1406
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-IS 121
N C+ NEC CSQ CT+ K + CSC EGY L+ D TCK + I +S
Sbjct: 1407 N-KTKCEPENECLDARSCSQNCTDEKHGFTCSCEEGYTLDADKRTCKVTDGVQDMRIYVS 1465
Query: 122 NRHSILVAD-----------------------LEEK--GKDHRAQDI------------- 143
NR+ I +D +E++ D R + I
Sbjct: 1466 NRNRIYWSDRFLENWHTFEARVENAIALAWDSVEDRIYWSDIREKKIYSATRNGTNVTVF 1525
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPS 202
+ GLD+ EG+A DWI ++YW+DS LN IEV E + R VL +N+ QPRG+ +DP
Sbjct: 1526 ISEGLDVTEGIALDWIARNLYWVDSSLNTIEVASLERSSARAVLIHENVDQPRGIAVDPR 1585
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G LFWTDWG+NPRIER MDGS R ++++KIYWPN + LD+ T R+YFADSKLD+I
Sbjct: 1586 KG--LLFWTDWGQNPRIERANMDGSERRVLVNSKIYWPNTIALDLTTNRLYFADSKLDYI 1643
Query: 263 D 263
D
Sbjct: 1644 D 1644
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 158/349 (45%), Gaps = 73/349 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++ TK+CDGK DC +G DE C C G C CH +P G +CTCP G L
Sbjct: 262 HCIHKTKLCDGKNDCLDGFDEK-NCSSNLCP-SLG-CQAGCHSSPSGGVCTCPVGYKLDE 318
Query: 64 D-SVTCQDMNECEQPGYCSQMCTNTKGSYICSC-NEGYVLEY------DNHT----CKAI 111
TC D+NEC + GYC Q C N + + CSC E Y LE DN T C +
Sbjct: 319 RFHRTCSDINECIEWGYCDQGCQNHRPGFTCSCLGECYHLEMMHGPGNDNRTLRGYCLSR 378
Query: 112 NHSAAFLIISNR-------------------------------------------HSILV 128
+ + L I+ R HS
Sbjct: 379 DSNTMRLYIARREGLYRINPNDPNEEAKKLVSGEFIYGIGFDFGDKKMFWTDRLSHSAFS 438
Query: 129 ADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK 188
AD+++ G + + + + L LA DW+ H+Y ++S RI++ +G R VL
Sbjct: 439 ADIDDSGDINNIKKLDLKNLIFPRNLAVDWLTNHLYIVESGSRRIDISTFDGERRTVLIA 498
Query: 189 DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248
D + P + LDP G +F+++ ++E MDG+ R T++ + + +G+ +DIA
Sbjct: 499 DGLVLPLDIALDPIRGE--MFFSNQF---KLESAAMDGTRRRTLVDSHTHQVSGVVVDIA 553
Query: 249 TRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
+R+Y+ D K+D ++ +++Y+ R++ + +G N VP G
Sbjct: 554 AKRIYWVDPKVDRVE--------SIDYNGKDRRI--VIQGMNNVPHPFG 592
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 179/466 (38%), Gaps = 99/466 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD-----LAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+C+N + CD DC + +DE GC E ++ G C + C G C C G
Sbjct: 3582 KCINASLACDHNDDCGDASDE-IGCAKRKGITCETNNENGNCKHLCTDVKDGYYCHCRDG 3640
Query: 59 -EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+ D C D++EC C+Q+C NTKGSY+C C E Y
Sbjct: 3641 FQPNPVDPYDCIDIDECMGNNTCTQICMNTKGSYLCRCLEDY------------------ 3682
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
++++V + GKD RA+ S L+ + D + ++
Sbjct: 3683 -----ENNVVVGAM--TGKDCRAK----SDPPLI-----------MIAADGEVVQLNPAH 3720
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI----- 232
TNR A + Q + +D P +FW D E ++ R + N+S
Sbjct: 3721 AGETNR--HAAGMLDQNDIIAVDFDPRRELMFWID-SEKRKVYRSALPKGNQSHAGQELN 3777
Query: 233 --ISTKIYWPNGLTLDIATRRVYFA----DSKLDFIDCKSLEIKTNVNYSTIFRKLYWID 286
P+ L++D T VY A D FI K E + +N
Sbjct: 3778 IDFKDLKSSPSALSIDYLTGNVYLAAISDDEAAGFIVRKKRETEQTIN------------ 3825
Query: 287 EGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
G+G + + K+ DG L+ G+L+ A+ TL + + D G +
Sbjct: 3826 -KGSGGTIYLAKS--DGRYLRTLIKGRLHIPTAI---------ITLPQIGRICFADAGFD 3873
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT-RRVYFADSKLDFIDFCNYDGTGRQQV 405
+IE MDG +R+ I+ IY P L +D R+Y+AD K ++ DGT R V
Sbjct: 3874 AKIECADMDGKHRNVIVKDLIYSPTSLAVDEGKDNRIYWADPKYRKVESVLPDGTKRTTV 3933
Query: 406 ILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKTPLF 451
I+ DN +P EN + + S E + F
Sbjct: 3934 II-------------DNRMPWAVDVFENNLYWASKESQDLFVQDKF 3966
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 101/233 (43%), Gaps = 53/233 (22%)
Query: 78 GYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G C +C S + C C GYVLE H C+ + S FLI++ + I L+E+ K
Sbjct: 2064 GNCEHLCIPKAFSQHYCMCATGYVLESATH-CRLFDQS--FLIVATKTQITGIPLKEEQK 2120
Query: 137 DHRAQDIV----VSGLDL-----------------------------------------V 151
A + + ++ +D V
Sbjct: 2121 RSVAMEPIGGTSIAAVDYEFESKSLFVAETSGANRGIYKVILGSGEVKNIVRDNFGSFTV 2180
Query: 152 EGLAYDWIGGHIYWL--DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
+A DWI ++Y++ DS IEVC +G +R +L P + +DP R+L+
Sbjct: 2181 RSIALDWINYNLYFINVDSDRTHIEVCQLDGKHRKILLSTKTETPTSLAVDPI--GRYLY 2238
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
W D G+ P I+R +DGS+R I+ I P LT+D + +Y+ D+KLD I
Sbjct: 2239 WADQGQKPSIQRAYLDGSHRQVIVHENIAEPTDLTIDSNSHMIYWTDAKLDGI 2291
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 99/458 (21%), Positives = 174/458 (37%), Gaps = 113/458 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNT-CHPTPLGA----------- 51
+C+ + VCDG +DC + +DE C+ +C C N C P
Sbjct: 182 QCIQKSWVCDGSSDCADSSDEPSTCEFKQCSGGEFQCKNKRCQPRKFRCDYYDDCGDNSD 241
Query: 52 -------LC-----TCPPGEILSNDSVTCQDMNECEQPGY--------------CSQMCT 85
LC CP + + C N+C G+ C C
Sbjct: 242 EEGCGQYLCPPQQWNCPGSGHCIHKTKLCDGKNDCLD-GFDEKNCSSNLCPSLGCQAGCH 300
Query: 86 NTKGSYICSCNEGYVLEYDNH-TCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIV 144
++ +C+C GY L+ H TC IN I ++ ++HR
Sbjct: 301 SSPSGGVCTCPVGYKLDERFHRTCSDIN-----------ECIEWGYCDQGCQNHRPGFTC 349
Query: 145 VS-----GLDLVEGLAYD--WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
L+++ G D + G+ DS R+ + G RI P
Sbjct: 350 SCLGECYHLEMMHGPGNDNRTLRGYCLSRDSNTMRLYIARREGLYRI--------NPN-- 399
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD- 256
DP+ + L ++ I IG D ++ K++W + L + + AD
Sbjct: 400 --DPNEEAKKLVSGEF-----IYGIGFDFGDK------KMFWTDRL-----SHSAFSADI 441
Query: 257 ------SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
+ + +D K+L N+ + LY ++ G +I + DG ++L+
Sbjct: 442 DDSGDINNIKKLDLKNLIFPRNLAVDWLTNHLYIVESGSR----RIDISTFDGERRTVLI 497
Query: 311 SGQLYEAL--ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY 368
+ L L ALD G +++S ++E MDG+ R T++ + +
Sbjct: 498 ADGLVLPLDIALDPIRGEMFFSN--------------QFKLESAAMDGTRRRTLVDSHTH 543
Query: 369 WPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+G+ +DIA +R+Y+ D K+D ++ +Y+G R+ VI
Sbjct: 544 QVSGVVVDIAAKRIYWVDPKVDRVESIDYNGKDRRIVI 581
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 142/351 (40%), Gaps = 79/351 (22%)
Query: 79 YCSQMCTNTKG-SYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEE--KG 135
+CS +C K C C G +L+ C I+ FL++ + +I +++ G
Sbjct: 1730 HCSDLCLIGKDMKSTCKCPLGKILDTSGKNC--ISDMKPFLMLIQKTNIFGLSMDDAVNG 1787
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
+ I ++GL YD I++L E+ T +++ +++ + R
Sbjct: 1788 TPSLSGMIPLAGLSNAYDADYDPESAEIFYL-----------EHATTGRIISPNSLPESR 1836
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN---GLTLDIATRRV 252
+ + PS +NR+ II+++I P+ + +D + +
Sbjct: 1837 IIQVVPS-----------------------ATNRTQIIASQI--PDDSYAMAMDWIGQNM 1871
Query: 253 YFAD---SKLDFIDCKSLEIKTNV---NYSTIFRK-------------LYWIDEGGNGVP 293
Y A+ ++ + K ++ + V N S L+W+D G +
Sbjct: 1872 YVANKISQTIEVVRTKDMQYRATVLNNNQSPTAVANPVALAIDSDRGLLFWLDRGSGAIS 1931
Query: 294 LKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
K+ +A++DG NA ++VS +L E LALD N LY+S K RI
Sbjct: 1932 PKVARADLDGKNALVIVSNELTELNHLALDTINQRLYFSESKAG------------RISY 1979
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
+ DG +R I++ P G+ R+++ADS D I+ G+
Sbjct: 1980 VTYDGQDRHYILNDVGKQPRGIAF--FNNRLFYADSAFDSIEVTTLSSDGQ 2028
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 24/163 (14%)
Query: 250 RRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL 309
RR+ F +K D S+ +++ + KLY+ G K+ N+ G +A+ +
Sbjct: 2468 RRLIFGPTKSKIAD--SVRHISDMKLDWLTHKLYFTTGRGG----KVYVINVQGEHAATI 2521
Query: 310 VSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN-------PRIERIGMDGSNRSTI 362
+G ALALD C ++FW+D G PRIER M G +R I
Sbjct: 2522 ANGDWTYALALD-----------PCAGFVFWSDSGYKITGGIYEPRIERANMAGGDRRVI 2570
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+ I P L +D +R+Y+AD I+ +YDG R+ V
Sbjct: 2571 LKEGISLPAALAIDFREQRLYWADINKLNIESSDYDGRNRRTV 2613
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 11/118 (9%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
LY+I+ + +++ +DG + IL+S + +L ++ R+L+W
Sbjct: 2192 LYFINVDSDRTHIEV--CQLDGKHRKILLSTKTETPTSLAVD---------PIGRYLYWA 2240
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
D G+ P I+R +DGS+R I+ I P LT+D + +Y+ D+KLD I DG
Sbjct: 2241 DQGQKPSIQRAYLDGSHRQVIVHENIAEPTDLTIDSNSHMIYWTDAKLDGIYRVRADG 2298
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ + + + DW+ +Y+ R ++ V + G + +A + T + LDP
Sbjct: 2479 IADSVRHISDMKLDWLTHKLYFTTGRGGKVYVINVQGEHAATIANGDWTY--ALALDPCA 2536
Query: 204 GTRWLFWTDWGEN-------PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G ++FW+D G PRIER M G +R I+ I P L +D +R+Y+AD
Sbjct: 2537 G--FVFWSDSGYKITGGIYEPRIERANMAGGDRRVILKEGISLPAALAIDFREQRLYWAD 2594
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 67/135 (49%), Gaps = 13/135 (9%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC--DENG-------TNRIVLAKDNITQ 193
++V+ D + +++DW+ +Y++D+ N +EV E G +R +L + +
Sbjct: 779 VLVTHNDGLVSMSFDWLSKQLYYVDNIRNSLEVVKISEQGLVHPDQLIHRQLL--NGLRD 836
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
P + + P G LF+ + RI R +D SN I +T + P+ + +D + R+
Sbjct: 837 PVAVAVHPWRGI--LFFAEAQRPARIYRCMIDASNCHIIRNTTLGRPSSMVIDFSEDRLC 894
Query: 254 FADSKLDFIDCKSLE 268
+ D+ L I+C + +
Sbjct: 895 YGDTLLKTINCMNFD 909
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 69/194 (35%), Gaps = 52/194 (26%)
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDN-----I 191
+R Q I D +A DWIG ++Y + IEV R + +N +
Sbjct: 1846 NRTQIIASQIPDDSYAMAMDWIGQNMYVANKISQTIEVVRTKDMQYRATVLNNNQSPTAV 1905
Query: 192 TQPRGMMLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248
P + +D G LFW D G +P++ R +DG N I+S ++ N L LD
Sbjct: 1906 ANPVALAIDSDRG--LLFWLDRGSGAISPKVARADLDGKNALVIVSNELTELNHLALDTI 1963
Query: 249 TRRVYF-----------------------------------------ADSKLDFIDCKSL 267
+R+YF ADS D I+ +L
Sbjct: 1964 NQRLYFSESKAGRISYVTYDGQDRHYILNDVGKQPRGIAFFNNRLFYADSAFDSIEVTTL 2023
Query: 268 EIKTNVNYSTIFRK 281
++ F+K
Sbjct: 2024 SSDGQLSQFQHFKK 2037
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEIL-S 62
C+ KVCD DC + +DE C + EC + LC C P+ C C G L
Sbjct: 3152 CIAEMKVCDRIYDCLDRSDESSKCFINECTTAEKPLCEQKCVDLPIDYRCDCFEGFALDK 3211
Query: 63 NDSVTCQDMNECEQ 76
+D +C D++ECE+
Sbjct: 3212 DDKKSCHDIDECEK 3225
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 59/151 (39%), Gaps = 50/151 (33%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNT-------------------- 43
C++ + CDG DC +G+DE P C ++C+ +F CSN
Sbjct: 3064 HCIHASWECDGDNDCLDGSDEHPNCTYSQCQPEFWQCSNNKCIPNSWKCDGNDDCDDGSD 3123
Query: 44 ---CHPTPLGAL----CT-----CPPGEILSNDSVT-----CQD---------MNEC--- 74
C AL C+ C GE ++ V C D +NEC
Sbjct: 3124 EKDCTDKSASALIANSCSIGQFRCSSGECIAEMKVCDRIYDCLDRSDESSKCFINECTTA 3183
Query: 75 EQPGYCSQMCTNTKGSYICSCNEGYVLEYDN 105
E+P C Q C + Y C C EG+ L+ D+
Sbjct: 3184 EKP-LCEQKCVDLPIDYRCDCFEGFALDKDD 3213
>gi|312069818|ref|XP_003137859.1| hypothetical protein LOAG_02273 [Loa loa]
Length = 4145
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 125/303 (41%), Positives = 164/303 (54%), Gaps = 43/303 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
D C+ L +CDGK CP DEG C C C+ CH +P G LC+CP GE
Sbjct: 771 APDICIPLHNLCDGKDHCPGNTDEGGRCARDLCAADRAACAFKCHMSPDGPLCSCPFGET 830
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI- 119
L N + C+ NEC CSQ+CT+ K + CSC EGY L+ D TCK + I
Sbjct: 831 LVNKT-KCEPENECLDARSCSQICTDEKHGFTCSCEEGYTLDADKRTCKVTDGVQDMRIY 889
Query: 120 ISNRHSILVAD-----------------------LEEKG--KDHRAQDI----------- 143
+SNR+ I +D +E++ D R + I
Sbjct: 890 VSNRNRIYWSDRFLENWHTFEARVENAIALAWDSVEDRVYWSDIREKKIYSATRNGTNVT 949
Query: 144 --VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLD 200
+ GLD+ EG+A DW+ ++YW+DS LN IEV E R VL +N+ QPRG+ +D
Sbjct: 950 VFISEGLDVTEGIALDWVARNLYWVDSSLNTIEVASLERPGARAVLIHENVDQPRGIAVD 1009
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G LFWTDWG+NPRIER MDGS R ++++KIYWPN + LD+ T R+YFADSKLD
Sbjct: 1010 PRKG--LLFWTDWGQNPRIERANMDGSERRVLVNSKIYWPNTIALDLTTNRLYFADSKLD 1067
Query: 261 FID 263
+ID
Sbjct: 1068 YID 1070
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 142/310 (45%), Gaps = 54/310 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS- 62
C+ KVCD DC + +DE C + EC + LC C P+ C C G L
Sbjct: 2598 CIVTAKVCDRVYDCLDRSDESSKCFINECIVAEKPLCEQKCVDLPIDYRCDCFDGFALDM 2657
Query: 63 NDSVTCQDMNECEQP-GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN-HSAAFLII 120
+D +C D++ECE G CSQ C N GSY C C +GY + D+ TCK ++ +L+
Sbjct: 2658 DDKKSCHDIDECETGLGRCSQKCENKVGSYKCWCVDGYAILSDDRTCKRVSTDPEPWLLF 2717
Query: 121 SNRHSILVADLEEKGKDHRA---QDIVVSGLDL--------------------------- 150
+N+H + L+ + + A ++++ +D+
Sbjct: 2718 ANKHYVRKLTLDGENYELVARGFENVISMDIDMKEEKVYLVDSGKLRLYRVGMEELDQPI 2777
Query: 151 -------------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
EG+A DWIG +Y L+ + + VC+ +G L +D I QP+ +
Sbjct: 2778 DSYEVVLRHNVFGTEGIAIDWIGRKLYMLNRQERSLRVCELDGRYCRTLIRDRIAQPKAI 2837
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNR-----STIISTKIYWPNGLTLDIATRRV 252
++ P G +L++T+W I R+ +DGS + + + WPN L +D ++
Sbjct: 2838 VIHPEKG--YLYFTEWSLQAYIGRVSLDGSPQLSDPVEKLAENDLGWPNALAIDFFADKL 2895
Query: 253 YFADSKLDFI 262
++AD+ L+ I
Sbjct: 2896 FWADAHLNEI 2905
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 169/424 (39%), Gaps = 82/424 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD-----LAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+C+N + CD DC + +DE GC E ++ G C + C G C C G
Sbjct: 3460 KCINASLACDHNDDCGDASDE-IGCAKRRGITCETNNENGNCKHLCTDVTNGYYCHCRDG 3518
Query: 59 -EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY-----VLEYDNHTCKAIN 112
+ +D C D++EC C+Q C NTKGSY+C C E + V C+A
Sbjct: 3519 FQPNPDDPYDCIDIDECTGNNTCTQSCLNTKGSYLCRCLEDFENNVVVGAMTGKDCRA-K 3577
Query: 113 HSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNR 172
++++ ++ +L G+ R V+ D++ L +D G ++W+DS+ +
Sbjct: 3578 GDPPLIMVAADGEVVQLNLAHAGETIRHAAGVLGQNDII-ALDFDPRRGLMFWIDSQQRK 3636
Query: 173 IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI 232
+ R L K N + G+ I + S
Sbjct: 3637 VY--------RSALPKGNQSHA-------------------GQELNINFKDLKSS----- 3664
Query: 233 ISTKIYWPNGLTLDIATRRVYFA----DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
P+ L++D T +YFA + FI K + + N +G
Sbjct: 3665 -------PSALSIDYLTGNIYFAAISDEEAAGFIARKKRQAEQARN------------KG 3705
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
G G I A DG L+ G+L+ A+ TL + + D G + +
Sbjct: 3706 GGGT---IYLAKSDGRYLRTLIKGRLHIPTAV---------ITLPQIGRICFADAGFDAK 3753
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIAT-RRVYFADSKLDFIDFCNYDGTGRQQVIL 407
IE MDG +R II IY P LT+D R+Y+AD K ++ DGT R VI+
Sbjct: 3754 IECADMDGKHRDVIIKDLIYSPTSLTVDEGKDNRIYWADPKYRKVESVLPDGTRRTTVIV 3813
Query: 408 IDLM 411
+ M
Sbjct: 3814 NNRM 3817
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 127/314 (40%), Gaps = 67/314 (21%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G C +C + C C GYVLE C+ + S FLI++ + I L+E+ K
Sbjct: 1490 GNCEHLCIPKVFSQHYCMCATGYVLEGTTQ-CRLFDQS--FLIVATKTQITGIPLKEEQK 1546
Query: 137 DHRAQDIV----VSGLDL-----------------------------------------V 151
A + + ++ +D V
Sbjct: 1547 RSVAMEPIGGAAIAAVDFEFESKSLFVAETSGPNRGIYRVTLGSGEVKNIVRDSFGSFTV 1606
Query: 152 EGLAYDWIGGHIYWL--DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
+A DW+ ++Y++ DS IEVC +G +R +L P + +DP R+L+
Sbjct: 1607 RSIALDWVNYNLYFINVDSDRTHIEVCQLDGKHRKILLSTKTETPSSLAVDPV--GRYLY 1664
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI------- 262
W D G+ P I+R +DGS+R I+ I P L +D + +Y+ D+KLD I
Sbjct: 1665 WADQGQKPSIQRAFLDGSHRQVIVHENIAEPTDLIVDPNSHMIYWTDAKLDGIYRVRADG 1724
Query: 263 ---DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
+ +I S + + +YW D K+ A+ + S+L S A
Sbjct: 1725 GPVELVRSDIAAAAGISLLGQTMYWTDNRLE----KVFSASSRPNQTSLLFSPTTIAAGL 1780
Query: 320 LDLENGMLYYSTLK 333
DL N +++ +++
Sbjct: 1781 ADLGNIVVFDESVQ 1794
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 133/331 (40%), Gaps = 41/331 (12%)
Query: 80 CSQMCTNTKG-SYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEE--KGK 136
CS +C + C C G +L+ +C I+ FL++ + +I +++ G
Sbjct: 1157 CSDLCLIGRDMKSTCKCPLGKILDTSGRSC--ISDMKPFLMLIQKTNIFGLSMDDGVNGT 1214
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD-SRLNRIEVCDENGTNRIVLAKDNITQPR 195
I ++GL YD I++L+ + RI + +RI+ + + T
Sbjct: 1215 SSLCGMIPLAGLSNAYDADYDPESAEIFYLEHATTGRIISPNSLPESRIIQVRSSATNRT 1274
Query: 196 GMMLDPSPGTRWLFWTDW-GENPRI-ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
+ P + DW G N + RI S ++ TK L+
Sbjct: 1275 QITASQIPDDSYAMAMDWIGRNLYVANRI----SQTIEVVRTKNMQYRATVLNNNQSPTA 1330
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
A+ +L + ++ L+W+D GG V K+ +A++DG NA ++VS
Sbjct: 1331 VANPV-------ALAVDSDRGL------LFWLDRGGGAVLPKVARADLDGKNALVIVSND 1377
Query: 314 LYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
L E LALD N LY+S K R F T DG +R I++ P
Sbjct: 1378 LTELNHLALDAVNQRLYFSESKAGRISFVT------------YDGQDRRYILNDVGKQPR 1425
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
G+ R+++ADS D I+ G G+
Sbjct: 1426 GIAF--FNNRLFYADSAFDSIEVTTLSGDGQ 1454
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 24/165 (14%)
Query: 248 ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307
A RR+ F +K ++ S+ +++ + K+Y+ G K+ ++ G +A+
Sbjct: 1912 AKRRLIFGPTKSKLVE--SVRHISDMKLDWLTHKIYFTTGRGG----KVYVMDIQGEHAA 1965
Query: 308 ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN-------PRIERIGMDGSNRS 360
+ +G ALALD C ++FW+D G PRIER M G +R
Sbjct: 1966 TIANGDWTYALALD-----------PCAGFVFWSDSGYKITGGMYEPRIERANMAGGDRH 2014
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
++ + P L +D+ +R+Y+AD I+ +YDG R+ V
Sbjct: 2015 IVLKEGVSLPAALAIDLREQRLYWADINKLNIESSDYDGKSRRTV 2059
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 100/479 (20%), Positives = 172/479 (35%), Gaps = 147/479 (30%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNT-CHPT--------------- 47
CV + CDG DC +G+DE C ++C+ +F C+N C P
Sbjct: 2510 HCVRASWECDGDNDCLDGSDEHANCTYSQCQPEFWQCANNKCIPNSWKCDGNDDCDDGSD 2569
Query: 48 -----------------PLGALCTCPPGEIL---------------SNDSVTCQDMNEC- 74
P G C GE + S++S C +NEC
Sbjct: 2570 EKECANKSGSDLMASGCPAGQF-RCRNGECIVTAKVCDRVYDCLDRSDESSKCF-INECI 2627
Query: 75 --EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH-TCKAINHSAAFLIISNRHSILVADL 131
E+P C Q C + Y C C +G+ L+ D+ +C I
Sbjct: 2628 VAEKP-LCEQKCVDLPIDYRCDCFDGFALDMDDKKSCHDI-------------------- 2666
Query: 132 EEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI 191
D +GL + +G + W + + D+
Sbjct: 2667 ----------DECETGLGRCSQKCENKVGSYKCWC--------------VDGYAILSDDR 2702
Query: 192 TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
T R + DP P WL + + + ++ +DG N +++ + +D+ +
Sbjct: 2703 TCKR-VSTDPEP---WLLFAN---KHYVRKLTLDGENYE-LVARGFENVISMDIDMKEEK 2754
Query: 252 VYFADS-KLDF-----------IDCKSLEIKTNVNYST------IFRKLYWIDEGGNGVP 293
VY DS KL ID + ++ NV + I RKLY ++ +
Sbjct: 2755 VYLVDSGKLRLYRVGMEELDQPIDSYEVVLRHNVFGTEGIAIDWIGRKLYMLNRQERSLR 2814
Query: 294 LKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
+ +DG L+ ++ + A+ + E G LY+ T+W I R
Sbjct: 2815 V----CELDGRYCRTLIRDRIAQPKAIVIHPEKGYLYF-----------TEWSLQAYIGR 2859
Query: 352 IGMDGSNR-----STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+ +DGS + + + WPN L +D ++++AD+ L+ I F + +G R +
Sbjct: 2860 VSLDGSPQLSDPVEKLAENDLGWPNALAIDFFADKLFWADAHLNEIGFMDLNGGTRHHI 2918
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 17/148 (11%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
VNY+ LY+I+ + +++ +DG + IL+S + +L ++
Sbjct: 1614 VNYN-----LYFINVDSDRTHIEV--CQLDGKHRKILLSTKTETPSSLAVD--------- 1657
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
R+L+W D G+ P I+R +DGS+R I+ I P L +D + +Y+ D+KLD I
Sbjct: 1658 PVGRYLYWADQGQKPSIQRAFLDGSHRQVIVHENIAEPTDLIVDPNSHMIYWTDAKLDGI 1717
Query: 393 DFCNYDGTGRQQVILIDLMVEFTNDLMG 420
DG G +++ D+ L+G
Sbjct: 1718 YRVRADG-GPVELVRSDIAAAAGISLLG 1744
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+V + + + DW+ IY+ R ++ V D G + +A + T + LDP
Sbjct: 1925 LVESVRHISDMKLDWLTHKIYFTTGRGGKVYVMDIQGEHAATIANGDWTY--ALALDPCA 1982
Query: 204 GTRWLFWTDWGEN-------PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G ++FW+D G PRIER M G +R ++ + P L +D+ +R+Y+AD
Sbjct: 1983 G--FVFWSDSGYKITGGMYEPRIERANMAGGDRHIVLKEGVSLPAALAIDLREQRLYWAD 2040
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 136/381 (35%), Gaps = 127/381 (33%)
Query: 5 CVNLTKVCDGKTD-----------------------------CPNGA------------D 23
C+N+ ++C+G D C NG D
Sbjct: 3414 CLNILQLCNGIDDCGPFDHSDEHLSMCSSFSEYGDCTTNQFKCTNGKCINASLACDHNDD 3473
Query: 24 EGPGCDLAECKHKFGL----------CSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMN 72
G D C + G+ C + C G C C G + +D C D++
Sbjct: 3474 CGDASDEIGCAKRRGITCETNNENGNCKHLCTDVTNGYYCHCRDGFQPNPDDPYDCIDID 3533
Query: 73 ECEQPGYCSQMCTNTKGSYICSCNE------------------------------GYVLE 102
EC C+Q C NTKGSY+C C E G V++
Sbjct: 3534 ECTGNNTCTQSCLNTKGSYLCRCLEDFENNVVVGAMTGKDCRAKGDPPLIMVAADGEVVQ 3593
Query: 103 YD-NHTCKAINHSAA-------------------FLIISNRHSILVADLEEKGKDHRAQD 142
+ H + I H+A F I S + + + L + + H Q+
Sbjct: 3594 LNLAHAGETIRHAAGVLGQNDIIALDFDPRRGLMFWIDSQQRKVYRSALPKGNQSHAGQE 3653
Query: 143 IVVSGLDL---VEGLAYDWIGGHIYW----------LDSRLNRI--EVCDENGTNRIVLA 187
+ ++ DL L+ D++ G+IY+ +R R + ++ G I LA
Sbjct: 3654 LNINFKDLKSSPSALSIDYLTGNIYFAAISDEEAAGFIARKKRQAEQARNKGGGGTIYLA 3713
Query: 188 KDN----ITQPRGMMLDPS-----PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY 238
K + T +G + P+ P + + D G + +IE MDG +R II IY
Sbjct: 3714 KSDGRYLRTLIKGRLHIPTAVITLPQIGRICFADAGFDAKIECADMDGKHRDVIIKDLIY 3773
Query: 239 WPNGLTLDIAT-RRVYFADSK 258
P LT+D R+Y+AD K
Sbjct: 3774 SPTSLTVDEGKDNRIYWADPK 3794
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 68/135 (50%), Gaps = 13/135 (9%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC--DENG-------TNRIVLAKDNITQ 193
I+V+ D + +++DW+ +Y++D+ N +EV E G +R +L + +
Sbjct: 193 ILVTHNDGLVSMSFDWLSKQLYYVDNIRNSLEVVKISEQGLVHPDQLIHRQLL--NGLRD 250
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
P + + P G LF+ + +I R +D SN TI +T + P+ + +D + R+
Sbjct: 251 PVAVAVHPWHGI--LFFAEAQRPAKIYRCIIDASNCQTIRNTTLGRPSSIAIDFSEDRLC 308
Query: 254 FADSKLDFIDCKSLE 268
+ D+ L I+C + +
Sbjct: 309 YGDTLLKTINCMNFD 323
>gi|393909668|gb|EJD75544.1| CBR-LRP-1 protein [Loa loa]
Length = 4694
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/303 (41%), Positives = 163/303 (53%), Gaps = 43/303 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
D C+ L +CDGK CP DEG C C C+ CH +P G LC+CP GE
Sbjct: 1320 APDICIPLHNLCDGKDHCPGNTDEGGRCARDLCAADRAACAFKCHMSPDGPLCSCPFGET 1379
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI- 119
L N C+ NEC CSQ+CT+ K + CSC EGY L+ D TCK + I
Sbjct: 1380 LVN-KTKCEPENECLDARSCSQICTDEKHGFTCSCEEGYTLDADKRTCKVTDGVQDMRIY 1438
Query: 120 ISNRHSILVAD-----------------------LEEKG--KDHRAQDI----------- 143
+SNR+ I +D +E++ D R + I
Sbjct: 1439 VSNRNRIYWSDRFLENWHTFEARVENAIALAWDSVEDRVYWSDIREKKIYSATRNGTNVT 1498
Query: 144 --VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLD 200
+ GLD+ EG+A DW+ ++YW+DS LN IEV E R VL +N+ QPRG+ +D
Sbjct: 1499 VFISEGLDVTEGIALDWVARNLYWVDSSLNTIEVASLERPGARAVLIHENVDQPRGIAVD 1558
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G LFWTDWG+NPRIER MDGS R ++++KIYWPN + LD+ T R+YFADSKLD
Sbjct: 1559 PRKG--LLFWTDWGQNPRIERANMDGSERRVLVNSKIYWPNTIALDLTTNRLYFADSKLD 1616
Query: 261 FID 263
+ID
Sbjct: 1617 YID 1619
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 142/310 (45%), Gaps = 54/310 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS- 62
C+ KVCD DC + +DE C + EC + LC C P+ C C G L
Sbjct: 3147 CIVTAKVCDRVYDCLDRSDESSKCFINECIVAEKPLCEQKCVDLPIDYRCDCFDGFALDM 3206
Query: 63 NDSVTCQDMNECEQP-GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN-HSAAFLII 120
+D +C D++ECE G CSQ C N GSY C C +GY + D+ TCK ++ +L+
Sbjct: 3207 DDKKSCHDIDECETGLGRCSQKCENKVGSYKCWCVDGYAILSDDRTCKRVSTDPEPWLLF 3266
Query: 121 SNRHSILVADLEEKGKDHRA---QDIVVSGLDL--------------------------- 150
+N+H + L+ + + A ++++ +D+
Sbjct: 3267 ANKHYVRKLTLDGENYELVARGFENVISMDIDMKEEKVYLVDSGKLRLYRVGMEELDQPI 3326
Query: 151 -------------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
EG+A DWIG +Y L+ + + VC+ +G L +D I QP+ +
Sbjct: 3327 DSYEVVLRHNVFGTEGIAIDWIGRKLYMLNRQERSLRVCELDGRYCRTLIRDRIAQPKAI 3386
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNR-----STIISTKIYWPNGLTLDIATRRV 252
++ P G +L++T+W I R+ +DGS + + + WPN L +D ++
Sbjct: 3387 VIHPEKG--YLYFTEWSLQAYIGRVSLDGSPQLSDPVEKLAENDLGWPNALAIDFFADKL 3444
Query: 253 YFADSKLDFI 262
++AD+ L+ I
Sbjct: 3445 FWADAHLNEI 3454
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 156/382 (40%), Gaps = 79/382 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++ TK+CDGK DC +GADE C C G C CH +P G +CTCP G L
Sbjct: 259 HCIHKTKLCDGKNDCSDGADE-KNCSSNLCP-SLG-CQAGCHSSPSGGVCTCPVGYKLDE 315
Query: 64 D-SVTCQDMNECEQPGYCSQMCTNTKGSYICSC-NEGYVLEY------DNHT----CKAI 111
TC D+NEC + GYC Q C N + + CSC E Y LE DNHT C +
Sbjct: 316 RFHRTCSDINECVEWGYCDQGCQNHRPGFTCSCLGECYHLEMMHGPGSDNHTLRGYCLSR 375
Query: 112 NHSAAFLIISNR-------------------------------------------HSILV 128
+ L I+ R HS
Sbjct: 376 DSDTMRLYIARREGLYRINPYDPSEETKKLVSGEFIYGIGFDFGDKKMFWTDRLSHSAFS 435
Query: 129 ADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK 188
AD+++ G + + + L LA DWI H+Y ++S RI++ NG R VL
Sbjct: 436 ADIDDSGDIRNIKKLDLKNLIFPRNLAVDWITNHLYIIESGSRRIDISAFNGERRTVLIA 495
Query: 189 DNITQPRGMMLDPSPG-----TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
D + P + LDP G + ++W D + R+E I +G++R +I P+
Sbjct: 496 DGLMLPLDIALDPIRGLVDIAAKRVYWVDPKVD-RVESIDYNGNDRRIVIQGMNNVPHPF 554
Query: 244 TLDIATRRVYFAD-SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMD 302
L I + +Y+ D ++L + + T++ W + N P+ I
Sbjct: 555 GLTIFDQYLYWTDWTRLGIMRVEKFGSPTDI---------IWTKKENNVFPMGIV----- 600
Query: 303 GSNASILVSGQLYEALALDLEN 324
+ V Q E L L ++N
Sbjct: 601 AYHPMAQVGPQESECLGLKVDN 622
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 169/424 (39%), Gaps = 82/424 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD-----LAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+C+N + CD DC + +DE GC E ++ G C + C G C C G
Sbjct: 4009 KCINASLACDHNDDCGDASDE-IGCAKRRGITCETNNENGNCKHLCTDVTNGYYCHCRDG 4067
Query: 59 -EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY-----VLEYDNHTCKAIN 112
+ +D C D++EC C+Q C NTKGSY+C C E + V C+A
Sbjct: 4068 FQPNPDDPYDCIDIDECTGNNTCTQSCLNTKGSYLCRCLEDFENNVVVGAMTGKDCRA-K 4126
Query: 113 HSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNR 172
++++ ++ +L G+ R V+ D++ L +D G ++W+DS+ +
Sbjct: 4127 GDPPLIMVAADGEVVQLNLAHAGETIRHAAGVLGQNDII-ALDFDPRRGLMFWIDSQQRK 4185
Query: 173 IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI 232
+ R L K N + G+ I + S
Sbjct: 4186 VY--------RSALPKGNQSHA-------------------GQELNINFKDLKSS----- 4213
Query: 233 ISTKIYWPNGLTLDIATRRVYFA----DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
P+ L++D T +YFA + FI K + + N +G
Sbjct: 4214 -------PSALSIDYLTGNIYFAAISDEEAAGFIARKKRQAEQARN------------KG 4254
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
G G I A DG L+ G+L+ A+ TL + + D G + +
Sbjct: 4255 GGGT---IYLAKSDGRYLRTLIKGRLHIPTAV---------ITLPQIGRICFADAGFDAK 4302
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIAT-RRVYFADSKLDFIDFCNYDGTGRQQVIL 407
IE MDG +R II IY P LT+D R+Y+AD K ++ DGT R VI+
Sbjct: 4303 IECADMDGKHRDVIIKDLIYSPTSLTVDEGKDNRIYWADPKYRKVESVLPDGTRRTTVIV 4362
Query: 408 IDLM 411
+ M
Sbjct: 4363 NNRM 4366
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 127/314 (40%), Gaps = 67/314 (21%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G C +C + C C GYVLE C+ + S FLI++ + I L+E+ K
Sbjct: 2039 GNCEHLCIPKVFSQHYCMCATGYVLEGTTQ-CRLFDQS--FLIVATKTQITGIPLKEEQK 2095
Query: 137 DHRAQDIV----VSGLDL-----------------------------------------V 151
A + + ++ +D V
Sbjct: 2096 RSVAMEPIGGAAIAAVDFEFESKSLFVAETSGPNRGIYRVTLGSGEVKNIVRDSFGSFTV 2155
Query: 152 EGLAYDWIGGHIYWL--DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
+A DW+ ++Y++ DS IEVC +G +R +L P + +DP R+L+
Sbjct: 2156 RSIALDWVNYNLYFINVDSDRTHIEVCQLDGKHRKILLSTKTETPSSLAVDPV--GRYLY 2213
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI------- 262
W D G+ P I+R +DGS+R I+ I P L +D + +Y+ D+KLD I
Sbjct: 2214 WADQGQKPSIQRAFLDGSHRQVIVHENIAEPTDLIVDPNSHMIYWTDAKLDGIYRVRADG 2273
Query: 263 ---DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
+ +I S + + +YW D K+ A+ + S+L S A
Sbjct: 2274 GPVELVRSDIAAAAGISLLGQTMYWTDNRLE----KVFSASSRPNQTSLLFSPTTIAAGL 2329
Query: 320 LDLENGMLYYSTLK 333
DL N +++ +++
Sbjct: 2330 ADLGNIVVFDESVQ 2343
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 133/331 (40%), Gaps = 41/331 (12%)
Query: 80 CSQMCTNTKG-SYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEE--KGK 136
CS +C + C C G +L+ +C I+ FL++ + +I +++ G
Sbjct: 1706 CSDLCLIGRDMKSTCKCPLGKILDTSGRSC--ISDMKPFLMLIQKTNIFGLSMDDGVNGT 1763
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD-SRLNRIEVCDENGTNRIVLAKDNITQPR 195
I ++GL YD I++L+ + RI + +RI+ + + T
Sbjct: 1764 SSLCGMIPLAGLSNAYDADYDPESAEIFYLEHATTGRIISPNSLPESRIIQVRSSATNRT 1823
Query: 196 GMMLDPSPGTRWLFWTDW-GENPRI-ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
+ P + DW G N + RI S ++ TK L+
Sbjct: 1824 QITASQIPDDSYAMAMDWIGRNLYVANRI----SQTIEVVRTKNMQYRATVLNNNQSPTA 1879
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
A+ +L + ++ L+W+D GG V K+ +A++DG NA ++VS
Sbjct: 1880 VANPV-------ALAVDSDRGL------LFWLDRGGGAVLPKVARADLDGKNALVIVSND 1926
Query: 314 LYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
L E LALD N LY+S K R F T DG +R I++ P
Sbjct: 1927 LTELNHLALDAVNQRLYFSESKAGRISFVT------------YDGQDRRYILNDVGKQPR 1974
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
G+ R+++ADS D I+ G G+
Sbjct: 1975 GIAF--FNNRLFYADSAFDSIEVTTLSGDGQ 2003
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 24/165 (14%)
Query: 248 ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307
A RR+ F +K ++ S+ +++ + K+Y+ G K+ ++ G +A+
Sbjct: 2461 AKRRLIFGPTKSKLVE--SVRHISDMKLDWLTHKIYFTTGRGG----KVYVMDIQGEHAA 2514
Query: 308 ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN-------PRIERIGMDGSNRS 360
+ +G ALALD C ++FW+D G PRIER M G +R
Sbjct: 2515 TIANGDWTYALALD-----------PCAGFVFWSDSGYKITGGMYEPRIERANMAGGDRH 2563
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
++ + P L +D+ +R+Y+AD I+ +YDG R+ V
Sbjct: 2564 IVLKEGVSLPAALAIDLREQRLYWADINKLNIESSDYDGKSRRTV 2608
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 100/479 (20%), Positives = 173/479 (36%), Gaps = 147/479 (30%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNT-CHPT--------------- 47
CV + CDG DC +G+DE C ++C+ +F C+N C P
Sbjct: 3059 HCVRASWECDGDNDCLDGSDEHANCTYSQCQPEFWQCANNKCIPNSWKCDGNDDCDDGSD 3118
Query: 48 -----------------PLGALCTCPPGEIL---------------SNDSVTCQDMNEC- 74
P G C GE + S++S C +NEC
Sbjct: 3119 EKECANKSGSDLMASGCPAGQF-RCRNGECIVTAKVCDRVYDCLDRSDESSKCF-INECI 3176
Query: 75 --EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH-TCKAINHSAAFLIISNRHSILVADL 131
E+P C Q C + Y C C +G+ L+ D+ +C I
Sbjct: 3177 VAEKP-LCEQKCVDLPIDYRCDCFDGFALDMDDKKSCHDI-------------------- 3215
Query: 132 EEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI 191
D +GL + +G + W + + D+
Sbjct: 3216 ----------DECETGLGRCSQKCENKVGSYKCWC--------------VDGYAILSDDR 3251
Query: 192 TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
T R + DP P WL + + + ++ +DG N +++ + +D+ +
Sbjct: 3252 TCKR-VSTDPEP---WLLFAN---KHYVRKLTLDGENYE-LVARGFENVISMDIDMKEEK 3303
Query: 252 VYFADS-----------KLDF-IDCKSLEIKTNVNYST------IFRKLYWIDEGGNGVP 293
VY DS +LD ID + ++ NV + I RKLY ++ +
Sbjct: 3304 VYLVDSGKLRLYRVGMEELDQPIDSYEVVLRHNVFGTEGIAIDWIGRKLYMLNRQERSLR 3363
Query: 294 LKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
+ +DG L+ ++ + A+ + E G LY+ T+W I R
Sbjct: 3364 V----CELDGRYCRTLIRDRIAQPKAIVIHPEKGYLYF-----------TEWSLQAYIGR 3408
Query: 352 IGMDGSNR-----STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+ +DGS + + + WPN L +D ++++AD+ L+ I F + +G R +
Sbjct: 3409 VSLDGSPQLSDPVEKLAENDLGWPNALAIDFFADKLFWADAHLNEIGFMDLNGGTRHHI 3467
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 17/148 (11%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
VNY+ LY+I+ + +++ +DG + IL+S + +L ++
Sbjct: 2163 VNYN-----LYFINVDSDRTHIEV--CQLDGKHRKILLSTKTETPSSLAVD--------- 2206
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
R+L+W D G+ P I+R +DGS+R I+ I P L +D + +Y+ D+KLD I
Sbjct: 2207 PVGRYLYWADQGQKPSIQRAFLDGSHRQVIVHENIAEPTDLIVDPNSHMIYWTDAKLDGI 2266
Query: 393 DFCNYDGTGRQQVILIDLMVEFTNDLMG 420
DG G +++ D+ L+G
Sbjct: 2267 YRVRADG-GPVELVRSDIAAAAGISLLG 2293
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+V + + + DW+ IY+ R ++ V D G + +A + T + LDP
Sbjct: 2474 LVESVRHISDMKLDWLTHKIYFTTGRGGKVYVMDIQGEHAATIANGDWTY--ALALDPCA 2531
Query: 204 GTRWLFWTDWGEN-------PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G ++FW+D G PRIER M G +R ++ + P L +D+ +R+Y+AD
Sbjct: 2532 G--FVFWSDSGYKITGGMYEPRIERANMAGGDRHIVLKEGVSLPAALAIDLREQRLYWAD 2589
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 136/381 (35%), Gaps = 127/381 (33%)
Query: 5 CVNLTKVCDGKTD-----------------------------CPNGA------------D 23
C+N+ ++C+G D C NG D
Sbjct: 3963 CLNILQLCNGIDDCGPFDHSDEHLSMCSSFSEYGDCTTNQFKCTNGKCINASLACDHNDD 4022
Query: 24 EGPGCDLAECKHKFGL----------CSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMN 72
G D C + G+ C + C G C C G + +D C D++
Sbjct: 4023 CGDASDEIGCAKRRGITCETNNENGNCKHLCTDVTNGYYCHCRDGFQPNPDDPYDCIDID 4082
Query: 73 ECEQPGYCSQMCTNTKGSYICSCNE------------------------------GYVLE 102
EC C+Q C NTKGSY+C C E G V++
Sbjct: 4083 ECTGNNTCTQSCLNTKGSYLCRCLEDFENNVVVGAMTGKDCRAKGDPPLIMVAADGEVVQ 4142
Query: 103 YD-NHTCKAINHSAA-------------------FLIISNRHSILVADLEEKGKDHRAQD 142
+ H + I H+A F I S + + + L + + H Q+
Sbjct: 4143 LNLAHAGETIRHAAGVLGQNDIIALDFDPRRGLMFWIDSQQRKVYRSALPKGNQSHAGQE 4202
Query: 143 IVVSGLDL---VEGLAYDWIGGHIYW----------LDSRLNRI--EVCDENGTNRIVLA 187
+ ++ DL L+ D++ G+IY+ +R R + ++ G I LA
Sbjct: 4203 LNINFKDLKSSPSALSIDYLTGNIYFAAISDEEAAGFIARKKRQAEQARNKGGGGTIYLA 4262
Query: 188 KDN----ITQPRGMMLDPS-----PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY 238
K + T +G + P+ P + + D G + +IE MDG +R II IY
Sbjct: 4263 KSDGRYLRTLIKGRLHIPTAVITLPQIGRICFADAGFDAKIECADMDGKHRDVIIKDLIY 4322
Query: 239 WPNGLTLDIAT-RRVYFADSK 258
P LT+D R+Y+AD K
Sbjct: 4323 SPTSLTVDEGKDNRIYWADPK 4343
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 94/435 (21%), Positives = 161/435 (37%), Gaps = 98/435 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNT-CHPTPLGA----------- 51
+C+ + VCDG +DC +G+DE P C+ +C C N C P
Sbjct: 179 QCIQKSWVCDGSSDCSDGSDEPPTCEFKQCSGGEFQCKNKRCQPRKFRCDYYDDCGDNSD 238
Query: 52 -------LC-----TCPPGEILSNDSVTCQDMNECEQ------------PGY-CSQMCTN 86
LC CP + + C N+C P C C +
Sbjct: 239 EEGCGQYLCPPQQWNCPGSGHCIHKTKLCDGKNDCSDGADEKNCSSNLCPSLGCQAGCHS 298
Query: 87 TKGSYICSCNEGYVLEYDNH-TCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVV 145
+ +C+C GY L+ H TC IN + ++ ++HR
Sbjct: 299 SPSGGVCTCPVGYKLDERFHRTCSDINECVEW-----------GYCDQGCQNHRPGFTCS 347
Query: 146 S-----GLDLVEGLAYD--WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
L+++ G D + G+ DS R+ + G RI
Sbjct: 348 CLGECYHLEMMHGPGSDNHTLRGYCLSRDSDTMRLYIARREGLYRI------------NP 395
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
DPS T+ L ++ I IG D ++ K++W + L+ + + D
Sbjct: 396 YDPSEETKKLVSGEF-----IYGIGFDFGDK------KMFWTDRLSHSAFSADI---DDS 441
Query: 259 LDFIDCKSLEIKT-----NVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
D + K L++K N+ I LY I+ G +I + +G ++L++
Sbjct: 442 GDIRNIKKLDLKNLIFPRNLAVDWITNHLYIIESGSR----RIDISAFNGERRTVLIADG 497
Query: 314 LYEAL--ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
L L ALD G++ + + ++W D + R+E I +G++R +I P+
Sbjct: 498 LMLPLDIALDPIRGLVDIAAKR----VYWVDPKVD-RVESIDYNGNDRRIVIQGMNNVPH 552
Query: 372 GLTLDIATRRVYFAD 386
L I + +Y+ D
Sbjct: 553 PFGLTIFDQYLYWTD 567
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 68/135 (50%), Gaps = 13/135 (9%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC--DENG-------TNRIVLAKDNITQ 193
I+V+ D + +++DW+ +Y++D+ N +EV E G +R +L + +
Sbjct: 742 ILVTHNDGLVSMSFDWLSKQLYYVDNIRNSLEVVKISEQGLVHPDQLIHRQLL--NGLRD 799
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
P + + P G LF+ + +I R +D SN TI +T + P+ + +D + R+
Sbjct: 800 PVAVAVHPWHGI--LFFAEAQRPAKIYRCIIDASNCQTIRNTTLGRPSSIAIDFSEDRLC 857
Query: 254 FADSKLDFIDCKSLE 268
+ D+ L I+C + +
Sbjct: 858 YGDTLLKTINCMNFD 872
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 23/137 (16%)
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC---TR 336
+K++W D + + +A I SG + LDL+N +++ L T
Sbjct: 421 KKMFWTD-----------RLSHSAFSADIDDSGDIRNIKKLDLKN-LIFPRNLAVDWITN 468
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-------IATRRVYFADSKL 389
L+ + G RI+ +G R+ +I+ + P + LD IA +RVY+ D K+
Sbjct: 469 HLYIIESGSR-RIDISAFNGERRTVLIADGLMLPLDIALDPIRGLVDIAAKRVYWVDPKV 527
Query: 390 DFIDFCNYDGTGRQQVI 406
D ++ +Y+G R+ VI
Sbjct: 528 DRVESIDYNGNDRRIVI 544
>gi|324499453|gb|ADY39765.1| Low-density lipoprotein receptor-related protein [Ascaris suum]
Length = 4738
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 163/303 (53%), Gaps = 43/303 (14%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
D C+ + +CDGK CP G DEG C C CS CH +P G LC+CP GE
Sbjct: 1376 APDTCIPIHNLCDGKDHCPGGTDEGGRCARDLCAADRAGCSFKCHMSPDGPLCSCPFGEQ 1435
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI- 119
L N C+ NEC CSQ CT+ K + CSC++GY L+ D TCK ++ I
Sbjct: 1436 LVN-KTRCEPENECLDARSCSQRCTDEKHGFTCSCDDGYTLDTDKRTCKVTDNVQDMRIY 1494
Query: 120 ISNRHSILVAD-----------LEEKG--------------KDHRAQDIVVS-------- 146
+SNR+ I +D L E D R + I V+
Sbjct: 1495 VSNRNRIYWSDSHLENWRTFAALVENAIALAWDSVDDKIYWSDIREKKIFVATRNGTNAT 1554
Query: 147 -----GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLD 200
GLD+ EG++ DW+ ++YW+DS LN IEV E R VL +N+ QPRG+ +D
Sbjct: 1555 TFIADGLDITEGISLDWVARNLYWVDSSLNTIEVASLERPGARAVLIHENVDQPRGIAVD 1614
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G LFWTDWG+ PRIER MDGS+R ++ TKIYWPN + LD+ T RVYFADSKLD
Sbjct: 1615 PRKG--LLFWTDWGQRPRIERAYMDGSDRHILVDTKIYWPNTIALDLTTNRVYFADSKLD 1672
Query: 261 FID 263
+ID
Sbjct: 1673 YID 1675
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 179/428 (41%), Gaps = 109/428 (25%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++ K+CDGK DC +GADE C C G C CH +P G CTCP G L
Sbjct: 278 HCIDEVKLCDGKNDCADGADEK-NCSSNLCP-SLG-CQAGCHASPSGGECTCPVGYKLDE 334
Query: 64 D-SVTCQDMNECEQPGYCSQMCTNTKGSYICSC-NEGYVLEY------DNHT----CKAI 111
TC D+NEC + GYC Q C N + + CSC E Y LE DN T C +
Sbjct: 335 RFHRTCSDINECAEWGYCDQGCQNHRPGFTCSCLGECYSLEMMHGPSTDNLTLRGYCVSR 394
Query: 112 NHSAAFLIISNR-------------------------------------------HSILV 128
+ L I+ R HS
Sbjct: 395 DAETMRLFIARREGLYRLNPYSTEEEAKKLVSGEFIYGVGFDYGDRKLFWTDRLSHSAFS 454
Query: 129 ADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK 188
ADL+E G+ + + + L LA DWI H+Y ++S RI+V +G R VL
Sbjct: 455 ADLDESGEIQHIKKLDLKNLVYPRNLAVDWITNHLYIIESGSRRIDVATFSGERRTVLIA 514
Query: 189 DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248
D +T P + LDP G +F+++ ++E MDG+ R +I T + +GL +DIA
Sbjct: 515 DGLTLPLDIALDPVRGE--MFFSNQF---KLETAAMDGTRRRILIDTHTHQVSGLVVDIA 569
Query: 249 TRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
+RVY+ D K+D ++ +++Y+ R++ + +G N VP G D
Sbjct: 570 GKRVYWVDPKVDRVE--------SIDYNGNDRRI--VAQGMNRVPHPFGLTIFD------ 613
Query: 309 LVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI- 367
++L+WTDW + R+ GS+ I S K
Sbjct: 614 ---------------------------QYLYWTDW-TRLGVMRVEKFGSSPEIIWSKKEN 645
Query: 368 -YWPNGLT 374
+P G+T
Sbjct: 646 NVFPMGIT 653
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 184/434 (42%), Gaps = 100/434 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTCHPTPLGALCTCPPGEIL-S 62
C+N KVCD DC + +DE C + EC + LC C P+ C C G L
Sbjct: 3206 CINSNKVCDRVYDCADRSDESSKCFIDECSTAEKPLCEQKCVDLPIDYRCECYEGFALDK 3265
Query: 63 NDSVTCQDMNECEQ-PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA-AFLII 120
+D +C D++ECE+ +CSQ C N GSY CSC +GY L +D+ TCK +N +L+
Sbjct: 3266 DDKKSCHDVDECEEGTSHCSQGCENKIGSYKCSCVDGYSLAHDDKTCKRVNSEPIPWLLF 3325
Query: 121 SNRHSI-----------LVA-----------DLEEKGK---DHRAQDIVVSGLDLV---- 151
+N+H + LVA D+ EK D + GLD +
Sbjct: 3326 ANKHYLRKLTLDGDNYELVASGFDNVISMDIDMIEKKAYIVDSGKLRLYRVGLDELDQPI 3385
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
EG+A DWIG +Y L+ + + VC+ +G L +D ITQP+ +
Sbjct: 3386 DSYEVVLRHNIFGTEGIAVDWIGRKLYLLNRQERSLRVCELDGRYCRTLIRDRITQPKAI 3445
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRST-----IISTKIYWPNGLTLDIATRRV 252
++ P G ++++T+W P I R+ MDGS + + WPN L +D + ++
Sbjct: 3446 VVHPGKG--YIYFTEWSLQPYIARMSMDGSPDMVDPIVKLAENDLGWPNALAIDFYSDKL 3503
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
++ D+ L+ ++G N+DG + +
Sbjct: 3504 FWGDAHLN----------------------------------EVGFMNLDGGARHHVHAK 3529
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
+ ++ + + +LFW+DW + G N TI+ T PN
Sbjct: 3530 RTSHVSSMAVFDD-----------FLFWSDWNLRQVMRADKWTGGNE-TILKTTTQLPND 3577
Query: 373 LTLDIATRRVYFAD 386
L + R+ +++
Sbjct: 3578 LRVIHPLRQPIYSN 3591
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 18/195 (9%)
Query: 151 VEGLAYDWIGGHIYWL--DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
+ +A DW+ ++Y++ DS +EVC +G +R +L P + +DP R++
Sbjct: 2212 IRSIAVDWVNYNLYFINVDSDRTHVEVCQLDGKHRKILLSTKTETPTSLAVDPI--GRYI 2269
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI------ 262
FW D G+ P I+R +DGSNR I+ I P L +D + VY+ D+KLD I
Sbjct: 2270 FWADQGQKPSIQRAFLDGSNRQVIVHEHIAEPTDLVVDPNSHMVYWTDAKLDGIYRVRSD 2329
Query: 263 ----DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
+ +I S + + +YW D + V + N +SIL+S A
Sbjct: 2330 GGTPELVRSDIAAAAGISLLGQTMYWTDNRLDKVFAATNRPNQ----SSILLSPTTVAAG 2385
Query: 319 ALDLENGMLYYSTLK 333
+L N +++ +++
Sbjct: 2386 LTELGNVVVFDGSVQ 2400
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 165/423 (39%), Gaps = 91/423 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGC-----DLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+CVN + CD DC + +DE GC E + G C + C G C C G
Sbjct: 4068 KCVNASLACDRNDDCGDASDE-IGCAKHSGRTCESNNDNGGCKHLCTDVAEGYYCHCREG 4126
Query: 59 -EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+ D C D++EC C+Q C NTKGSY+C C E +
Sbjct: 4127 FQPNPEDPYDCIDIDECAGNNTCTQSCLNTKGSYLCRCLEDF------------------ 4168
Query: 118 LIISNRHSILVADLEEKGKDHRAQD----IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI 173
++++V + GKD RA+ ++++ D + L GG +NR
Sbjct: 4169 -----ENNVVVGAM--TGKDCRAKGDAALVMIAADDQIVQLGLAHAGG--------VNRH 4213
Query: 174 EVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI- 232
+ N I+ ++ P +FW D G+ +I R + N+S I
Sbjct: 4214 AAATSSDNNDII------------AVEFDPRRELMFWID-GQKNKIYRSAIAKGNQSHIG 4260
Query: 233 ------ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWID 286
+ P+ L +D T ++ A D + + + +++
Sbjct: 4261 QELDIDFPSLKATPSALAVDYLTGNLFIATVLGDEL----------TGFISRKKRMSEPH 4310
Query: 287 EGGNGVPLKIGKANMDGSNASILVSG--QLYEALALDLENGMLYYSTLKCTRWLFWTDWG 344
G+G I A DG ++ G Q+ A+ + + G + Y+ D G
Sbjct: 4311 RFGDGA---IYVAKSDGRYLRKIIGGRLQIPTAIVVAPQIGRICYA-----------DAG 4356
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR-RVYFADSKLDFIDFCNYDGTGRQ 403
+IE MDG +R I++ IY P + +D A R+Y+AD K +D DGT R
Sbjct: 4357 SEAKIECADMDGKHREVIVNELIYSPTSMAIDEAKENRIYWADPKYHKVDSILPDGTKRT 4416
Query: 404 QVI 406
++
Sbjct: 4417 TIV 4419
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 132/333 (39%), Gaps = 45/333 (13%)
Query: 80 CSQMCTNTKG-SYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEE--KGK 136
CS +C K SY C C G L+ C +N FL++ + +I +++
Sbjct: 1763 CSHLCLIGKEMSYTCKCPMGKTLDASGKKC--VNDLKPFLLLIQKTNIFGVQMDDVINAT 1820
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN-RIEVCDENGTNRIVLAKDNITQPR 195
A I ++GL+ +YD +Y+L+ ++ R+ N RI+ N ++
Sbjct: 1821 PAMAGMIPLAGLNNAYDASYDPESFEVYYLELPISGRVIGPSSNAEARIMKISLNSSERV 1880
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
++ P + DW +G N +Y N ++ I R
Sbjct: 1881 PILTSQIPDDPYCMAMDW-----------NGHN--------LYIANKVSQTIEVVRTQGT 1921
Query: 256 DSKLDFI--DCKSLEIKTNVNYSTIFRK--LYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+ + D + V + + L+W+D G P K+ +A++DG N ++VS
Sbjct: 1922 QYRATLLNNDQSPTTVAQPVAIAVDSDRGLLFWLDRGAGAAPPKVARADLDGKNPLVIVS 1981
Query: 312 GQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYW 369
L E +ALD N +YYS K RI + DG +R +++
Sbjct: 1982 NDLSELDHIALDTANQRVYYSESKAG------------RISSVTYDGQDRHYVLNDAGKQ 2029
Query: 370 PNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
P GL R+++ADS D ++ G G+
Sbjct: 2030 PRGLAF--FNNRLFYADSAFDSVEVATITGDGQ 2060
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 104/476 (21%), Positives = 183/476 (38%), Gaps = 141/476 (29%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSN-TCHPT--------------- 47
C++ + CDG DC +G+DE C ++C+ +F C+N C P+
Sbjct: 3118 HCIHASWECDGDNDCLDGSDEHANCTYSQCQPEFWQCANHKCIPSSWKCDGNDDCDDGSD 3177
Query: 48 ------PLGALC---TCPPG-------EILSNDSVT-----CQD---------MNEC--- 74
+G+ CPPG E ++++ V C D ++EC
Sbjct: 3178 EKDCAEAIGSTAEGNACPPGQFKCASGECINSNKVCDRVYDCADRSDESSKCFIDECSTA 3237
Query: 75 EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK 134
E+P C Q C + Y C C EG+ L+ D+ + S D E+
Sbjct: 3238 EKP-LCEQKCVDLPIDYRCECYEGFALDKDD-----------------KKSCHDVDECEE 3279
Query: 135 GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
G H +Q N+I + + LA D+ T
Sbjct: 3280 GTSHCSQGCE--------------------------NKIGSYKCSCVDGYSLAHDDKTCK 3313
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI--ATRRV 252
R + +P P WL + + + ++ +DG N + S + N +++DI ++
Sbjct: 3314 R-VNSEPIP---WLLFAN---KHYLRKLTLDGDNYELVASG---FDNVISMDIDMIEKKA 3363
Query: 253 YFADS-----------KLDF-IDCKSLEIKTNVNYST------IFRKLYWIDEGGNGVPL 294
Y DS +LD ID + ++ N+ + I RKLY ++ + +
Sbjct: 3364 YIVDSGKLRLYRVGLDELDQPIDSYEVVLRHNIFGTEGIAVDWIGRKLYLLNRQERSLRV 3423
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+DG L+ ++ + A+ + G Y +++T+W P I R+ M
Sbjct: 3424 ----CELDGRYCRTLIRDRITQPKAIVVHPGKGY---------IYFTEWSLQPYIARMSM 3470
Query: 355 DGSNRST-----IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
DGS + + WPN L +D + ++++ D+ L+ + F N DG R V
Sbjct: 3471 DGSPDMVDPIVKLAENDLGWPNALAIDFYSDKLFWGDAHLNEVGFMNLDGGARHHV 3526
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 166/457 (36%), Gaps = 113/457 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNT-CHPTPLG------------ 50
+C+ + VCDG DC +G+DE P C+ +C C N C P
Sbjct: 198 QCIQKSWVCDGSNDCADGSDEPPTCEFKQCSGGDFQCKNKRCQPRKFRCDYYDDCGDNSD 257
Query: 51 ----ALCTCPPGEILSNDSVTCQD---------------------MNECEQPGYCSQMCT 85
CPP + +S C D N C G C C
Sbjct: 258 EEGCGQYLCPPQQWNCPNSGHCIDEVKLCDGKNDCADGADEKNCSSNLCPSLG-CQAGCH 316
Query: 86 NTKGSYICSCNEGYVLEYDNH-TCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIV 144
+ C+C GY L+ H TC IN A + ++ ++HR
Sbjct: 317 ASPSGGECTCPVGYKLDERFHRTCSDINECAEW-----------GYCDQGCQNHRPGFTC 365
Query: 145 VS-----GLDLVEGLAYD--WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
L+++ G + D + G+ D+ R+ + G R
Sbjct: 366 SCLGECYSLEMMHGPSTDNLTLRGYCVSRDAETMRLFIARREGLYR-------------- 411
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD- 256
L+P GE I +G D +R K++W + L + + AD
Sbjct: 412 -LNPYSTEEEAKKLVSGE--FIYGVGFDYGDR------KLFWTDRL-----SHSAFSADL 457
Query: 257 ------SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
+ +D K+L N+ I LY I+ G +I A G ++L+
Sbjct: 458 DESGEIQHIKKLDLKNLVYPRNLAVDWITNHLYIIESGSR----RIDVATFSGERRTVLI 513
Query: 311 SGQLYEAL--ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY 368
+ L L ALD G +++S ++E MDG+ R +I T +
Sbjct: 514 ADGLTLPLDIALDPVRGEMFFSN--------------QFKLETAAMDGTRRRILIDTHTH 559
Query: 369 WPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+GL +DIA +RVY+ D K+D ++ +Y+G R+ V
Sbjct: 560 QVSGLVVDIAGKRVYWVDPKVDRVESIDYNGNDRRIV 596
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 17/148 (11%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
VNY+ LY+I+ + +++ +DG + IL+S + +L ++
Sbjct: 2220 VNYN-----LYFINVDSDRTHVEV--CQLDGKHRKILLSTKTETPTSLAVD--------- 2263
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
R++FW D G+ P I+R +DGSNR I+ I P L +D + VY+ D+KLD I
Sbjct: 2264 PIGRYIFWADQGQKPSIQRAFLDGSNRQVIVHEHIAEPTDLVVDPNSHMVYWTDAKLDGI 2323
Query: 393 DFCNYDGTGRQQVILIDLMVEFTNDLMG 420
DG G +++ D+ L+G
Sbjct: 2324 YRVRSDG-GTPELVRSDIAAAAGISLLG 2350
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 73/176 (41%), Gaps = 39/176 (22%)
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI 296
I+ P L T R + +D KLD++ +KLY+ G KI
Sbjct: 2523 IFGPTKTKLPQTTVR-HISDMKLDWL----------------TQKLYFT----TGRSGKI 2561
Query: 297 GKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN-------PRI 349
+ G + + + +G ALALD C +FW+D G PRI
Sbjct: 2562 YTMDTQGEHIATVANGDWTYALALD-----------PCAGLIFWSDSGYKISGGVYEPRI 2610
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
ER M G +R II + P + +D +R+Y+AD I+ +YDG R+ +
Sbjct: 2611 ERANMAGGDRQVIIREGVSLPASIAVDFRDQRIYWADVNRLNIESADYDGNNRRTI 2666
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 11/113 (9%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
+ + DW+ +Y+ R +I D G + +A + T + LDP G +FW
Sbjct: 2539 ISDMKLDWLTQKLYFTTGRSGKIYTMDTQGEHIATVANGDWTY--ALALDPCAG--LIFW 2594
Query: 211 TDWGEN-------PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+D G PRIER M G +R II + P + +D +R+Y+AD
Sbjct: 2595 SDSGYKISGGVYEPRIERANMAGGDRQVIIREGVSLPASIAVDFRDQRIYWAD 2647
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 13/131 (9%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC--DENG-------TNRIVLAKDNITQ 193
++V+ D + +++DW+ +Y++D+ N +EV E G +R++L + +
Sbjct: 795 VLVTHNDGLVSMSFDWLSKQLYYVDNIRNSLEVVKISEQGLVHPDQVVHRLLL--NGLRD 852
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
P + + P G LF+ + +I +D SN I + + P+ +D R+
Sbjct: 853 PVAVAVHPWKG--LLFFAEAARPAKIYSCNIDASNCKIIRNATLGRPSSFAIDFEENRLC 910
Query: 254 FADSKLDFIDC 264
+ D+ L I+C
Sbjct: 911 YGDTLLKTINC 921
>gi|291240342|ref|XP_002740078.1| PREDICTED: low density lipoprotein-related protein 2-like
[Saccoglossus kowalevskii]
Length = 4013
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/337 (37%), Positives = 180/337 (53%), Gaps = 43/337 (12%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C++ VC+G +CP G DE P C+ C G CS+ C TP GA C C G+ L N
Sbjct: 1251 QCIDNNDVCNGVEECPLGHDESPICNDDSCMINNGGCSHQCLQTPFGAECVCLLGQQLLN 1310
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
DS C D+NECE PG CSQ C + K S+ C C +GY+LE D HTCK+ N + ++++SN
Sbjct: 1311 DSKVCADINECEPPGACSQTCIDEKYSFKCECGDGYMLEPDRHTCKSTNSAPVYMVVSNV 1370
Query: 124 HSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR 183
SI+ D++ ++ L V + +D G IYW ++ +NRI NGTN+
Sbjct: 1371 DSIIRHDIQTA-----ESTVIWDSLSNVLAVDFDASEGRIYWTEASVNRISRSYLNGTNK 1425
Query: 184 IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
V LFWTDWG +PRIER GMDGS+R+ I++ +IYWPNGL
Sbjct: 1426 QV--------------------HLLFWTDWGRSPRIERAGMDGSDRTVIVTDRIYWPNGL 1465
Query: 244 TLDIATRRVYFADSKLDFID------------CKSLEIKTNVNYSTIFRK-LYWIDEGGN 290
TLD+ T RVYF D +LDFI+ S + + +++ +F +YW D N
Sbjct: 1466 TLDLPTERVYFGDRRLDFIEFCDYDGNNRHHVIGSTQFISGLHHMALFEDFVYWTDRENN 1525
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLENGML 327
+++ K G N S +VS L L + + + L
Sbjct: 1526 EA-MRVNKYT--GQNRSAVVS--LSHPLGIHINHPAL 1557
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 198/409 (48%), Gaps = 90/409 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGL--CSNTCHPTPLGALCTCPPGEILS 62
CV VCDG DC + +DE C C G+ C N CH +P G +C C G IL
Sbjct: 225 CVPQEWVCDGADDCLDLSDE-KRCGENNC----GILGCENDCHVSPTGGICYCDVGYILD 279
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D+ TC D +EC G C Q+C N +Y CSC EGY +E ++H CKAI AA + S
Sbjct: 280 TDNRTCVDYDECGVWGSCDQLCHNVPSAYRCSCYEGYQIENNSH-CKAIGGGAAKIFFSL 338
Query: 123 RHSILVADLEEKGKD-------------HRAQDIVV----------------SGLDLV-- 151
R++I+ D++ + H A I+ +G+++V
Sbjct: 339 RNAIMSVDIDGSNIETVVETENAIGVDFHYASQILFWTDDTHNKLYSSNIDGTGVEVVLD 398
Query: 152 ------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
E +A DWIG +Y ++S + +I++C+ +G+ R L + + QPRG+ LDP+ G
Sbjct: 399 IGLHTPENVAVDWIGNKLYVVESYIGQIDICEMDGSLRAPLLTEGLNQPRGIGLDPTEG- 457
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
++F +DWG+ P I+R MDGSN ++S K+ WPNGLT+DIA++R+++ D +LD++
Sbjct: 458 -YMFISDWGKYPAIKRAFMDGSNVVILVSDKVIWPNGLTVDIASKRIFWVDGRLDYV--- 513
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
+V Y +G N L+SG LY LD+
Sbjct: 514 -----QSVTY--------------------------NGQNRETLISGGLYVPHPLDITVF 542
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
Y ++ +DW + ++ S+ + I+ T+ P G+T
Sbjct: 543 EQY---------VYVSDWTKMGLLKVNKFMESDYTIIVQTESAKPMGVT 582
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 135/456 (29%), Positives = 195/456 (42%), Gaps = 116/456 (25%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
RC+ VCDG DC + +DE P + C+H C P C +++ N
Sbjct: 2842 RCIPKQWVCDGDNDCQDTSDELP----SLCEHPPVEC-----PEFQCDNDQCISFDLVCN 2892
Query: 64 DSVTCQD--------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINH 113
C D ++EC E PG CSQ+C NT GSYIC C EGY+ E YDN TCK +
Sbjct: 2893 KHNNCDDESDERHCNVDECTETPGVCSQICENTHGSYICKCTEGYIREGYDNRTCKHEDD 2952
Query: 114 SAAFLIISNRHSI--LVADL---------------------EEK-----GKDHRAQDIVV 145
FL+ SNR+ I L DL EE+ H Q I +
Sbjct: 2953 FDPFLVFSNRYYIRKLAIDLSNYELIGQGFSNVVALDIHIAEERIYFTDVPSHVMQRIFL 3012
Query: 146 SGLDLV----------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
+G L EG+ DW+G IYW D + I+V + +GT+R L + +PR
Sbjct: 3013 NGTGLETIVSHFVPDGEGIGIDWVGRKIYWADRSNDMIDVAELDGTSRKTLVSKGLFEPR 3072
Query: 196 GMMLDPSPGTRWLFWTDWG-ENPRIERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVY 253
+++ P G +++WTDW I RIGMDG+N+S +I K+ WPNGLT+D T R+Y
Sbjct: 3073 AVVVHPRIG--YVYWTDWSLSYAHIGRIGMDGTNQSIVIQGEKVGWPNGLTIDYTTDRIY 3130
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+ D+ D+I+ A++DGSN +
Sbjct: 3131 WVDAHYDYIE----------------------------------FADLDGSNQHRVTDTG 3156
Query: 314 LYEALALDL-ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
+ A+ L EN +++WTDW + G NR ++ T I+ P
Sbjct: 3157 ISHPFAISLFEN------------YIYWTDWNTKAIYKADKFTGENR-VVLQTTIHRPMD 3203
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
L VY + + + C + G + LI
Sbjct: 3204 L-------HVYHPLRQREMPNPCGSNNGGCSHLCLI 3232
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 149/317 (47%), Gaps = 61/317 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD-----LAECKHKFGLCSNTCHPTPLGALCTCPPG 58
RCV++ VCD DC + +DE GC L EC G C C G LC+C G
Sbjct: 3683 RCVSVFSVCDTFDDCGDQSDEA-GCHKTGQTLNECLVNNGGCELHCLDIADGFLCSCGDG 3741
Query: 59 -EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINH--- 113
+ + + +C+D+NEC +P C Q+C N KG Y C C+ GY+ EY N + C+A
Sbjct: 3742 YQAVPGNKRSCRDVNECLEP-TCMQVCLNNKGGYHCGCSSGYLDEYRNGSHCRASGDDEI 3800
Query: 114 ------------------------------SAAFLIISNRHSILV---ADLEEKGKDHR- 139
+ + +I SI+ L+ + +
Sbjct: 3801 LMYTDGPEIRRYNPKQNRFGDVVTGEKRSWAMDYYVIDGNQSIVYWTDTSLQTVKRSYLP 3860
Query: 140 --------AQDIVVSGLDLVEGLAYDWIGGHIYWL----DSRLNRIEVCDENGTNRIVLA 187
+QD+ ++G+ EG+A DW+ G +YW D+ L +I V +G + L
Sbjct: 3861 YLTEQVGFSQDLGITGIIRPEGIAVDWVEGLLYWTDIGDDTTLPKISVSMLDGRYQKTLI 3920
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ +P ++++P G W++W D G +PRIE M+G NR+ ++S +I P G+T+D
Sbjct: 3921 STGLGRPGAIVVNPRRG--WMYWVDSGLSPRIEAAWMNGQNRTVLVSDQIVEPTGITIDF 3978
Query: 248 AT-RRVYFADSKLDFID 263
A R+Y+ D K + I+
Sbjct: 3979 ANGDRIYWCDKKENLIE 3995
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 82/140 (58%), Gaps = 23/140 (16%)
Query: 290 NGVPLKIGKANMDG-------SNASILVSGQLYEALALDLE--NGMLYYS---------- 330
N P+ + +N+D + S ++ L LA+D + G +Y++
Sbjct: 1359 NSAPVYMVVSNVDSIIRHDIQTAESTVIWDSLSNVLAVDFDASEGRIYWTEASVNRISRS 1418
Query: 331 ----TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 386
T K LFWTDWG +PRIER GMDGS+R+ I++ +IYWPNGLTLD+ T RVYF D
Sbjct: 1419 YLNGTNKQVHLLFWTDWGRSPRIERAGMDGSDRTVIVTDRIYWPNGLTLDLPTERVYFGD 1478
Query: 387 SKLDFIDFCNYDGTGRQQVI 406
+LDFI+FC+YDG R VI
Sbjct: 1479 RRLDFIEFCDYDGNNRHHVI 1498
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 119/245 (48%), Gaps = 23/245 (9%)
Query: 33 CKHKFGLCSNTCHPT-PLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
CK G C + C P P +C C G L+ D V+C N SQ+ S+
Sbjct: 1827 CKVNNGRCHHLCLPNGPATKVCKCTIGFQLAPDGVSC---NNHTSFAVVSQLTVIRGFSF 1883
Query: 92 ICSCNEG---------YVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
E + L D H + A F +NR++ + ++ G R ++
Sbjct: 1884 SDDHEEAMVPIAGQGRFTLHVDVHMEDQYIYFADFNA-ANRNANGIQRIKPDGS--RLRN 1940
Query: 143 IVVSGL--DLVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMM 198
++ +G+ + + GL DWI G++Y+ ++ + IEVC +G+ R+VL K PR +
Sbjct: 1941 LITTGIGKNGIRGLTVDWIAGNLYFTNAFESETYIEVCRLDGSYRLVLLKTVEDLPRAIA 2000
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADS 257
++P ++L+W D+G+ P+IER +DGSNR ++ + +P + +D T +VY+ D+
Sbjct: 2001 VNPV--KKYLYWCDYGQQPKIERSNLDGSNRLVLVQNENTVYPRDICVDYQTHKVYWVDT 2058
Query: 258 KLDFI 262
+ I
Sbjct: 2059 DSEQI 2063
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 135/339 (39%), Gaps = 95/339 (28%)
Query: 27 GCDLAECKHKFGLCSNTCHPTPLGAL-CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCT 85
G + C G C C P + C C G +L ND +C D++
Sbjct: 2140 GANPGGCYTSNGDCQQLCFGRPDNSFHCACATGTLL-NDGKSCGDVD------------- 2185
Query: 86 NTKGSYICSCNEGYV--LEYDNHTCKAINHSAAF--LIISNRHSILVADLEEK------- 134
+++ NEG V L +D A +HS + + R L D +EK
Sbjct: 2186 ----AFLLLANEGQVRSLHFD-----ATDHSQPRPPMTVPGRTYSLDFDYQEKLLFYTEI 2236
Query: 135 --------GKDHRAQDIVV---SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR 183
D + D V+ ++++ G+A+DW+ IY D + I + +GT+R
Sbjct: 2237 FTSSVRYRALDDPSSDPVIVTDEDVNMLSGIAFDWVNKKIYVTDLLSSIIFAINMDGTDR 2296
Query: 184 IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ + +N PRG+++DP G ++W G+ IER M G+ R +ST I P GL
Sbjct: 2297 MTII-NNANNPRGIIVDPCKGQ--IYWISRGQLSLIERSTMSGNYREQFVSTDIGSPGGL 2353
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
T+D KLYW D N KI + N+DG
Sbjct: 2354 TIDYDE------------------------------NKLYWCDNERN----KIERINIDG 2379
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD 342
SN +++S + L +GM Y +++WTD
Sbjct: 2380 SNREVVISHSI-------LSHGMTLYGN-----YIYWTD 2406
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 155/380 (40%), Gaps = 86/380 (22%)
Query: 78 GYCSQMCT------NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI--LVA 129
G C Q+C N Y C C GY L+ D +C I+ FL+++ H I +
Sbjct: 601 GGCQQLCVVSHTTDNGGLGYRCKCKTGYELDSDQISCTKID---KFLLVTQDHVIRGISL 657
Query: 130 DLEEKG---------------------------KDHRAQDIVVSGLD------------- 149
DL ++G D Q I + LD
Sbjct: 658 DLNKRGDAIFPVSDRGSKYSGVDYDVRNEFLYFSDINKQWIARTKLDGSGYEPVVHNKMF 717
Query: 150 -LVEGLAYDWIGGHIYWLDSRLNRIEVC--DENGTNRIVLAKDNITQPRGMMLDPSPGTR 206
V +A DW+ ++Y++DS LN + V + R ++ N+ QP +++ P G
Sbjct: 718 SHVVSIAIDWVSNNLYYVDSMLNSLSVVWLMQTSVQRTLIT--NLRQPVSVVVHPMEG-- 773
Query: 207 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SK 258
+LFW++ I R DGSN++TII+T++ P+GL +D R++Y++D S+
Sbjct: 774 YLFWSEVRRPAAIFRTRGDGSNKTTIINTELGDPHGLAIDFQARKLYWSDVTLNKIERSE 833
Query: 259 LDFIDCKSLEIKTNVNYSTIFRK---LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D +++ +++ +I +Y +D G N KI + N +A++++ L
Sbjct: 834 FDGSSRQTISVQSTSQPVSITVNGDFIYLLDAGFN----KIQRVN---GSATVIIREGLN 886
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
+A + + + + C+R G+N + + P G+ +
Sbjct: 887 DATNIKVYDINMQSGENACSR------HGQNGDCSHFCFPMPS----FTRHCGCPYGMKI 936
Query: 376 DIATRRVYFADSKLDFIDFC 395
D T+ AD ID C
Sbjct: 937 DTGTQMSCIADPDESPIDLC 956
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 13/212 (6%)
Query: 56 PPGEILSNDSVTCQDMNECEQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINH 113
P G +++ ++ N CE G CS +C + C C+ GY L D C+ +
Sbjct: 1547 PLGIHINHPALQPTSRNFCENSG-CSHLCVLAPNDAGFTCMCSPGYELNADGLMCEQ-SL 1604
Query: 114 SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI 173
FL++S+ ++ + + + + +A DW+ +I+W + + I
Sbjct: 1605 IICFLLLSDVERMI----SQMNGSSPEMFVPTAYVGAPLSIAIDWVSRNIFWSNPNEHII 1660
Query: 174 EV--CDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN-PRIERIGMDGSNRS 230
EV DE R V+ DN+ P + +DPS G ++W + RI + MDG+N
Sbjct: 1661 EVMKLDEEKNYRTVVFSDNVGIPGAICVDPSLGM--IYWAEVTPTLTRISKGRMDGTNPQ 1718
Query: 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
T+++ + LT+DI +++Y++DS L I
Sbjct: 1719 TVVNGNLGQVEYLTIDIKQQQLYWSDSVLKMI 1750
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 52/209 (24%)
Query: 206 RWLFWTDWGENPR----IERIGMDGSNRSTIISTKI--YWPNGLTLDIATRRVYFADSKL 259
+++++ D+ R I+RI DGS +I+T I GLT+D +YF ++
Sbjct: 1911 QYIYFADFNAANRNANGIQRIKPDGSRLRNLITTGIGKNGIRGLTVDWIAGNLYFTNA-- 1968
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG--QLYEA 317
E +T Y + R +DGS +L+ L A
Sbjct: 1969 -------FESET---YIEVCR--------------------LDGSYRLVLLKTVEDLPRA 1998
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTK-IYWPNGLTLD 376
+A++ ++L+W D+G+ P+IER +DGSNR ++ + +P + +D
Sbjct: 1999 IAVN-----------PVKKYLYWCDYGQQPKIERSNLDGSNRLVLVQNENTVYPRDICVD 2047
Query: 377 IATRRVYFADSKLDFIDFCNYDGTGRQQV 405
T +VY+ D+ + I ++DGT + V
Sbjct: 2048 YQTHKVYWVDTDSEQIQRVSWDGTNIETV 2076
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 142/344 (41%), Gaps = 60/344 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G C Q+C S+ C+C G +L D +C ++ AFL+++N V L
Sbjct: 2151 GDCQQLCFGRPDNSFHCACATGTLLN-DGKSCGDVD---AFLLLANEGQ--VRSLHFDAT 2204
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQP 194
DH ++ L +D+ +++ + + R D+ ++ +++ +++
Sbjct: 2205 DHSQPRPPMTVPGRTYSLDFDYQEKLLFYTEIFTSSVRYRALDDPSSDPVIVTDEDVNML 2264
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
G+ D + ++ TD + I I MDG++R TII+ P G+ +D
Sbjct: 2265 SGIAFDWV--NKKIYVTDLLSS-IIFAINMDGTDRMTIINNANN-PRGIIVD-------- 2312
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
CK ++YWI G + I ++ M G+ VS +
Sbjct: 2313 --------PCKG--------------QIYWISRGQLSL---IERSTMSGNYREQFVSTDI 2347
Query: 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
L ++ Y K L+W D E +IERI +DGSNR +IS I +G+T
Sbjct: 2348 GSPGGLTID-----YDENK----LYWCD-NERNKIERINIDGSNREVVISHSIL-SHGMT 2396
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
L +Y+ D +L + F TG +V L+ + D+
Sbjct: 2397 L--YGNYIYWTDVELMAV-FKAEKHTGAGEVTLVQGLSNMPMDI 2437
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 106/254 (41%), Gaps = 63/254 (24%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERI--GMDGSNRSTIISTK-IYWPNGLTLDIATRRV 252
G+M + S +L +D +ER+ M+GS+ + T + P + +D +R +
Sbjct: 1597 GLMCEQSLIICFLLLSD------VERMISQMNGSSPEMFVPTAYVGAPLSIAIDWVSRNI 1650
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
++++ I+ L+ + N +R + + D G
Sbjct: 1651 FWSNPNEHIIEVMKLDEEKN------YRTVVFSDNVG----------------------- 1681
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
+ A+ +D GM+Y++ + T RI + MDG+N T+++ +
Sbjct: 1682 -IPGAICVDPSLGMIYWAEVTPTL----------TRISKGRMDGTNPQTVVNGNLGQVEY 1730
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLE 432
LT+DI +++Y++DS L I CN DGT +Q DL+ + P L +
Sbjct: 1731 LTIDIKQQQLYWSDSVLKMIGTCNVDGTSKQ-------------DLVTNLATPK-GLAVY 1776
Query: 433 NGMLYYSTEGAEFL 446
LYYS G E +
Sbjct: 1777 GSYLYYSDIGFEVI 1790
>gi|198416045|ref|XP_002124313.1| PREDICTED: similar to low density lipoprotein receptor-related
protein 2, partial [Ciona intestinalis]
Length = 2085
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 121/297 (40%), Positives = 167/297 (56%), Gaps = 42/297 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCP-PGEILS 62
+C++ KVCDGK DC G DE C C FG C++ C P G +C C G L
Sbjct: 1322 KCISYDKVCDGKADCSFGTDEDHFCVTDLCS-SFG-CTDKCTNLPTGPVCWCDGAGYELL 1379
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
NDS TC D++EC + YCSQ C NT+GS+ C C++GY+L+ D TCK + + ++N
Sbjct: 1380 NDSKTCADIDECAR-HYCSQACDNTEGSFYCKCDDGYLLDSDGTTCK-VTSEPRIIDVTN 1437
Query: 123 RHSI--LVADLEEK-----GKDHRAQD------------------------------IVV 145
R+ I L AD + G+ D +
Sbjct: 1438 RNYIYELNADTNSRRTTIYGRSMLGMDFDWLTRKLYFADVSDGILYKAYRNGTQKEIVFR 1497
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
SG L E +A DW+G ++YW D L +EV +GT+R +L +N+T PRG+ LDP G
Sbjct: 1498 SGQALTENVAVDWVGRNLYWCDYSLGTVEVARIDGTHRAILHAENVTNPRGLALDPRDGY 1557
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+LFWTDWG+NPRIER MDG++R TI+ +++WPNGLT+D T+ +YFAD+KLDFI
Sbjct: 1558 HFLFWTDWGQNPRIERCDMDGAHRKTIVDDRLFWPNGLTIDYPTKTIYFADAKLDFI 1614
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 156/306 (50%), Gaps = 48/306 (15%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEG---PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+ RC+N+ ++CDG DC G DE C C C C TP G +C C G
Sbjct: 268 SSRCINVVQICDGNNDCEGGEDEATTTKTCSSTRCG--ILSCDGFCRATPNGGMCYCSDG 325
Query: 59 EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVL--EYDNHTCKAINHSAA 116
+++D ++C+D +EC G C Q C NT GSY C C GYV E+D+ CKA + + A
Sbjct: 326 YQVADDGISCEDFDECSVFGMCEQTCENTVGSYKCGCGLGYVPEEEHDHLHCKAASVAGA 385
Query: 117 -FLIISNRHSILVADLE--------------------EKG----KDHRAQDIVVSGLDL- 150
L++S +I + EKG D + I+ S +D
Sbjct: 386 PRLLVSAGPNIYFNNFMNDALDIAVAANGPDGVDYHYEKGIIFWADPGTKKIMSSNVDGN 445
Query: 151 ------------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
E +A DW+G ++Y +++++ RI+VC+ +G++R + + + QPRG+
Sbjct: 446 NQKVVLDKSIEDPELVAVDWVGNNLYIVETKVARIDVCNFDGSHRSSVLTEGLRQPRGLA 505
Query: 199 LDPSPGTRWLFWTDW-GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP+ G ++F TDW R++R MDGS T++ T + +P+G+TLD RVY+ D+
Sbjct: 506 LDPTKG--YMFLTDWYTATARLDRAYMDGSELYTLVDTSVGYPSGITLDFENTRVYWVDT 563
Query: 258 KLDFID 263
K D ++
Sbjct: 564 KFDCVE 569
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 109/240 (45%), Gaps = 51/240 (21%)
Query: 76 QPGYCSQMCTNTKGS----YICSCNEGYVLEYDNHTC---------------------KA 110
Q G CS +C + S Y C C+ G+VL+ D +C +
Sbjct: 654 QNGGCSHLCVLSHVSNGLGYSCLCDLGFVLDKDRKSCIHSNQFLLTAAYSSIRGIATGRY 713
Query: 111 INHSAAFLIISN-RHSILVADLE---------EKGKD----------HRAQDIVVSGLDL 150
N A I+SN R S + + + KD +D+V++ L
Sbjct: 714 QNSDAMVPILSNGRQSFMAVTGDAINGFVYYGDNNKDIIQRSLVNGTGSPEDVVINRLQT 773
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVC---DENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
+ L+ DW G++Y +DS RI V D N R +++KD I P + + SP T +
Sbjct: 774 IRALSLDWTTGNLYVVDSSKRRIFVANTKDPNNQRRTIVSKD-IRSPTSVAV--SPRTGY 830
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
+ WTD +IE+ MDG++R+ +++ ++ P G+T+D T VY+ DS D I+ SL
Sbjct: 831 MVWTDTYRPAKIEKSWMDGTHRTPLVNQTLWIPIGVTIDHKTNYVYWMDSGFDRIESMSL 890
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 161/378 (42%), Gaps = 74/378 (19%)
Query: 57 PGEILSNDSV-TCQDMNECEQPGYCSQMC---TNTKGSYICSCNEGYVLEYDNHTCKAIN 112
PG+I++ V Q N CE CS +C + Y C+C G L D HTC +
Sbjct: 1679 PGDIIAFHPVRQPQGTNYCED-NPCSHICLLSSFRPRYYTCACPVGSTL-VDTHTCSSTK 1736
Query: 113 HSAAFLIISNRHSIL-VADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN 171
F+++S I ++ + + + +G + + +D GG I+W+++
Sbjct: 1737 DD--FILVSTPSRIFGISPDPDDQDSDKMIPVTTTGNGM--DVEHDDHGGWIFWVNTLNK 1792
Query: 172 RIEVCDENGTNRIVLAKDNITQ-PRGMMLDPSPGTRWLFWTDWGENPRIERIGMD-GSN- 228
RIE +GTN+ A +I P + LD G +++T+ G IE I +D G N
Sbjct: 1793 RIEKIHIDGTNQTDFAPSSILGLPNALALDWVSGN--MYYTNPGSR-SIEVIRVDPGPNG 1849
Query: 229 ---RSTIIS-----TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFR 280
R+TI++ T + P GL +D +
Sbjct: 1850 QFFRTTIVANIGNETGVANPIGLAVDPSK------------------------------G 1879
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDLENGMLYYSTLKCTRWL 338
KLYW D+G +P KI + N DGS+ +++ ++ + +ALD NG +Y
Sbjct: 1880 KLYWSDQGSGIIPAKISRCNTDGSSLENIITTKVTRVQHVALDY-NGRIY---------- 1928
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WT+ I DGS+ TI+ I + + + VY++D L+ I+ +
Sbjct: 1929 -WTEQSSG-SINSANTDGSDIRTIVDNVI---QPMAITVLGDYVYYSDLALELIERVDI- 1982
Query: 399 GTGRQQVILIDLMVEFTN 416
TG+ Q IL + + T+
Sbjct: 1983 ATGKIQEILRSDVQQVTS 2000
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 127/331 (38%), Gaps = 33/331 (9%)
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPR 195
HR + IV L GL D+ IY+ D++L+ I C +G R + N I P
Sbjct: 1580 HR-KTIVDDRLFWPNGLTIDYPTKTIYFADAKLDFIHRCGYDGQGRAEVLAGNLFIKHPH 1638
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGM-DGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
+ + +L+WTD E + R DGSN + T + +P + R+
Sbjct: 1639 ALTVLED----YLYWTDR-ETYSVSRCNKWDGSNDQQRVMTGLSYPGDIIAFHPVRQPQG 1693
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ- 313
+ D +++ + FR Y+ G L + ILVS
Sbjct: 1694 TNYCED-------NPCSHICLLSSFRPRYYTCACPVGSTLVDTHTCSSTKDDFILVSTPS 1746
Query: 314 ----LYEALALDLENGMLYYSTL---------KCTRWLFWTDWGENPRIERIGMDGSNRS 360
+ + M+ +T W+FW + N RIE+I +DG+N++
Sbjct: 1747 RIFGISPDPDDQDSDKMIPVTTTGNGMDVEHDDHGGWIFWVN-TLNKRIEKIHIDGTNQT 1805
Query: 361 TIISTKIY-WPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLM 419
+ I PN L LD + +Y+ + I+ D Q ++ N+
Sbjct: 1806 DFAPSSILGLPNALALDWVSGNMYYTNPGSRSIEVIRVDPGPNGQFFRTTIVANIGNETG 1865
Query: 420 GDNGVPALALDLENGMLYYSTEGAEFLKTPL 450
N + LA+D G LY+S +G+ + +
Sbjct: 1866 VANPI-GLAVDPSKGKLYWSDQGSGIIPAKI 1895
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%)
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDF 394
T ++ WTD +IE+ MDG++R+ +++ ++ P G+T+D T VY+ DS D I+
Sbjct: 828 TGYMVWTDTYRPAKIEKSWMDGTHRTPLVNQTLWIPIGVTIDHKTNYVYWMDSGFDRIES 887
Query: 395 CNYDGTGRQQV 405
+ G R+Q+
Sbjct: 888 MSLFGYNRRQL 898
>gi|427794773|gb|JAA62838.1| Putative low-density lipoprotein receptor, partial [Rhipicephalus
pulchellus]
Length = 938
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 137/412 (33%), Positives = 192/412 (46%), Gaps = 92/412 (22%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
+ C+ VCDGK DC DE C EC G CS+ C P+G C C PG
Sbjct: 378 GNHCIPKALVCDGKNDCGAYEDEPKDRCHENECAKDNGGCSDICRDDPVGFHCECKPGFR 437
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLI 119
L+ D TC D++EC PG CSQ C NTKG + C C EGY+LE D+H CKA +L+
Sbjct: 438 LTEDGKTCDDVDECATPGSCSQTCINTKGGFKCECIEGYMLEPRDHHRCKA-KEGVPYLL 496
Query: 120 ISNRHSILVADLE--------EKGKDHRAQD----------------------------- 142
+NR+ I +LE K + A D
Sbjct: 497 FANRNDIRKINLETGEYVEVVSKLRSTIATDYIYRTGTVIWSDTVDEVISSAPIDKGTPV 556
Query: 143 --IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
I+ L + +GLA DWI HIYW D+ N I V D +G R L + + +PR ++++
Sbjct: 557 KVIIDKDLHVADGLAVDWIYNHIYWTDTAQNLISVADLDGRMRRALFSEELDEPRAIVVN 616
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G W+FWTDWG+ P+IER GMDGS+RS I++T I WPNGLT+D T+R+++ D+KL
Sbjct: 617 PLEG--WMFWTDWGKQPKIERAGMDGSHRSAIVTTDILWPNGLTIDFLTKRLFWVDAKLH 674
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EAL 318
I A+ DGS+ +++S L
Sbjct: 675 L----------------------------------ISSADYDGSHRRVVLSSPLLVKHPF 700
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 370
++D+ WL+WTDW E+ I ++ T I+ ++ P
Sbjct: 701 SIDVFED-----------WLYWTDW-ESEVINKVNKFNGQNLTHIANGVFSP 740
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 107/201 (53%), Gaps = 22/201 (10%)
Query: 229 RSTIISTKIY------WPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
RSTI + IY W + + I++ + ID K L + + I+ +
Sbjct: 521 RSTIATDYIYRTGTVIWSDTVDEVISSAPIDKGTPVKVIID-KDLHVADGLAVDWIYNHI 579
Query: 283 YWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD 342
YW D N I A++DG L S +L E A+ + N + W+FWTD
Sbjct: 580 YWTDTAQN----LISVADLDGRMRRALFSEELDEPRAI-VVNPL--------EGWMFWTD 626
Query: 343 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
WG+ P+IER GMDGS+RS I++T I WPNGLT+D T+R+++ D+KL I +YDG+ R
Sbjct: 627 WGKQPKIERAGMDGSHRSAIVTTDILWPNGLTIDFLTKRLFWVDAKLHLISSADYDGSHR 686
Query: 403 QQVILIDLMVE--FTNDLMGD 421
+ V+ L+V+ F+ D+ D
Sbjct: 687 RVVLSSPLLVKHPFSIDVFED 707
>gi|359065534|ref|XP_003586126.1| PREDICTED: LOW QUALITY PROTEIN: prolow-density lipoprotein
receptor-related protein 1 [Bos taurus]
Length = 4544
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 146/421 (34%), Positives = 201/421 (47%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC +G+DE GC + EC HK CS C +G C C PG L
Sbjct: 2916 RCVAEALLCNGQDDCGDGSDER-GCHINECLSHKLSGCSQDCEDLKIGFKCRCRPGFRLK 2974
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC DM+EC CSQ C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2975 DDGRTCADMDECSTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 3034
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 3035 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 3094
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3095 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3154
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS+RS I+ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 3155 QNG--YLYWTDWGDHSLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDY 3212
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3213 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3238
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 3239 LFEDYVY-----------WTDW-ETKSINRAHKTTGTNKTLLIST-LHRPMDLHVFHALR 3285
Query: 381 R 381
+
Sbjct: 3286 Q 3286
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 155/304 (50%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1159 CLPPDKLCDGNDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1216
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1217 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1276
Query: 124 HSILVADLEE-------------------------------KGKDHRAQ----------D 142
H I DL + + K +R + +
Sbjct: 1277 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYKTDVVEDKIYRGKLLSSSALTSFE 1336
Query: 143 IVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V+ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1337 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1396
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R TI + WPNGLT+D +R+ + D++
Sbjct: 1397 RDGI--LFWTDWDASLPRIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDAR 1454
Query: 259 LDFI 262
D I
Sbjct: 1455 SDAI 1458
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 164/320 (51%), Gaps = 59/320 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ ++++C+G DC +G+DEG C +C H G C + C PT G C C L
Sbjct: 85 CILMSRLCNGVQDCADGSDEGSHCREQRGQCSH-LG-CQHHCVPTLNGPTCYCNNSFQLQ 142
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLI 119
D TC+D +EC G CSQ+CTNT GS+ C C EGY+L+ DN +CKA N L+
Sbjct: 143 ADGKTCKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPVLL 202
Query: 120 ISNRHS------------------------------------ILVADLEEKGK------- 136
I+N + + V D + +
Sbjct: 203 IANSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDSAAQTQLKCARMP 262
Query: 137 ------DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
D +I +S L VE +A DW+ G+ Y++D +RI VC+ NG + L
Sbjct: 263 GLKGFVDEYTINISLS-LHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLE 321
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R
Sbjct: 322 LYNPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSR 379
Query: 251 RVYFADSKLDFIDCKSLEIK 270
VY+AD+ LD+I+ E K
Sbjct: 380 LVYWADAYLDYIEVVDYEGK 399
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 168/431 (38%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1855 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1911
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1912 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1971
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1972 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2029
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DGS R +++ I WPNG+++D ++Y+ D++ D I+ LE +
Sbjct: 2030 YPRIERSRLDGSERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEDREV 2089
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2090 VLSSNNMDMFSVSVFEEFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFN 2149
Query: 298 KANMDGSNASILVSGQLYE--------ALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G + A +GML C + + + E +
Sbjct: 2150 RDRQKGTNVCAVDNGGCQQLCLYRGNGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 2209
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ + + D + +I+ + G T R++F+D I
Sbjct: 2210 KSVHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2268
Query: 396 NYDGTGRQQVI 406
N DG+GR ++
Sbjct: 2269 NDDGSGRTTIV 2279
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 125/268 (46%), Gaps = 49/268 (18%)
Query: 26 PGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMC 84
PGC D+ EC +FG CS C+ T G LC+C + ++ N C+ G Q+
Sbjct: 3820 PGCQDINECL-RFGTCSQLCNNTKGGHLCSCARNFMKTH--------NTCKAEGSEYQV- 3869
Query: 85 TNTKGSYICSCNEGYVLEYDNHTCKA-----------------INHSAAFLIISNRH--- 124
YI NE L + +H A ++ A + +N H
Sbjct: 3870 -----LYIADDNEIRSL-FPSHPHSAYEQAFQGDESVRIDAMDVHVKAGRVYWTNWHTGT 3923
Query: 125 ----SILVADLEEKGKDHRAQ------DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
S+ A HR Q + +SGL + G+A DW+ G++YW DS + IE
Sbjct: 3924 ISYRSLPPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIE 3983
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V G NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++
Sbjct: 3984 VAQMKGENRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQ 4041
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
I WP GL +D R+Y+AD+KL I
Sbjct: 4042 DNIQWPTGLAVDYHNERLYWADAKLSVI 4069
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 485 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 543
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 544 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 603
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 604 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 661
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 662 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 721
Query: 261 FID 263
I+
Sbjct: 722 RIE 724
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 166/422 (39%), Gaps = 117/422 (27%)
Query: 5 CVNLTKVCDGKTDCPNGADEGP-------------------GCDL--------------- 30
C++ CDG+ DCP+G+DE P G +L
Sbjct: 40 CISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCILMSRLCNGVQDCA 99
Query: 31 ------AECKHKFGLCS-----NTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY 79
+ C+ + G CS + C PT G C C L D TC+D +EC G
Sbjct: 100 DGSDEGSHCREQRGQCSHLGCQHHCVPTLNGPTCYCNNSFQLQADGKTCKDFDECSVYGT 159
Query: 80 CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLIISNRHSILVADLEEKGK 136
CSQ+CTNT GS+ C C EGY+L+ DN +CKA N L+I+N +IL L
Sbjct: 160 CSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPVLLIANSQNILATYLSGA-- 217
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD------------SRLNRIEVCDENGTNRI 184
+ I + + + + + W+ +R+ ++ + T I
Sbjct: 218 --QVSTITPTSTRQTTAMDFSYANETVCWVHVGDSAAQTQLKCARMPGLKGFVDEYTINI 275
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L+ ++ Q M +D G + F D + RI +G T++ ++Y P G+
Sbjct: 276 SLSLHHVEQ---MAIDWLTGN-FYFVDDIDD--RIFVCNRNGDTCVTLLDLELYNPKGIA 329
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
LD A +V+F D Y I K+ + +MDG
Sbjct: 330 LDPAMGKVFFTD------------------YGQI---------------PKVERCDMDGQ 356
Query: 305 NASILVSGQLY--EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
N + LV ++ + LDL + ++Y++ + D+ IE + +G R TI
Sbjct: 357 NRTKLVDSKIVFPHGITLDLVSRLVYWADA-------YLDY-----IEVVDYEGKGRQTI 404
Query: 363 IS 364
I
Sbjct: 405 IQ 406
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 16/137 (11%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 294 FYFVDD----IDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAMGK---------VFFT 340
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 341 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 400
Query: 402 RQ---QVILIDLMVEFT 415
RQ Q ILI+ + T
Sbjct: 401 RQTIIQGILIEHLYGLT 417
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 30/184 (16%)
Query: 232 IISTKIYWPNGLTLDIATRRVYFA-------------DSKLDFIDCKSLEIKTNVNYSTI 278
+ + ++YW N T I+ R + A D + ++ L++ + +
Sbjct: 3909 VKAGRVYWTNWHTGTISYRSLPPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWV 3968
Query: 279 FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTR 336
+YW D G + + + A M G N L+SG + E A+ +D G +Y
Sbjct: 3969 AGNVYWTDSGRDVIEV----AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-------- 4016
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
W+DWG +P+IE MDG+ R T++ I WP GL +D R+Y+AD+KL I
Sbjct: 4017 ---WSDWGNHPKIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIR 4073
Query: 397 YDGT 400
+GT
Sbjct: 4074 LNGT 4077
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 139/353 (39%), Gaps = 63/353 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C + + C+C L DN TC FL+ + + I DL+
Sbjct: 1547 GPCSHLCLIDYNRTVSCACPHLMKLHKDNTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1603
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1604 NYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1662
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1663 LAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1709
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I ANMDGSN ++L SGQ
Sbjct: 1710 --------------------HPLRGKLYWTD-GDN-----ISMANMDGSNRTLLFSGQRG 1743
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY+ + K N I R +DGS I + +
Sbjct: 1744 PVGLAIDFPESKLYWISSK------------NHTINRCNLDGSELEVIDAMRNQLGKATA 1791
Query: 375 LDIATRRVYFADSKLDFIDFCN-YDGTG----RQQVILIDLMVEFTNDLMGDN 422
L I ++++AD + + CN DG+G R L+ M + + D+
Sbjct: 1792 LAIMGDKLWWADQVSEKMGTCNKADGSGSVVLRNSTTLVMHMKVYDESIQLDH 1844
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2341 ECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2400
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2401 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2431
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 2260 IHFGNIQQINDDGSGRTTIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGA 2319
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2320 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIR 2377
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2378 TPNGLAIDHRAEKLYFSDATLDKIE 2402
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3041 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 3090
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3091 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3148
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3149 ---------ALVVDVQNGYLYWTDWGDHSL 3169
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2381 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 2436
Query: 213 W 213
W
Sbjct: 2437 W 2437
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 679 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 738
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIER--------IGMDGSNRSTIISTKI 237
+ G+ + +LFWT++ G R+ER + + S R I ++
Sbjct: 739 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLERGTGGAAPIVTLLRSERPPIFEIRM 794
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
Y D ++V +++ C SL + T
Sbjct: 795 Y-------DAQQQQVGTNKCRVNNGGCSSLCLAT 821
>gi|67845965|dbj|BAE00010.1| Lipophorin receptor [Rhyparobia maderae]
Length = 907
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 139/409 (33%), Positives = 189/409 (46%), Gaps = 98/409 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADE-GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L+KVCD K DCPN DE G C EC G CS C TP G C C G L
Sbjct: 328 CIPLSKVCDKKPDCPNWEDEPGDKCGKNECLENNGGCSQKCADTPGGYYCDCLHGYKLM- 386
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D+ TC+D+NEC+ PG CSQ C N KG++ C C EGY+ + NHT CKA+ A+ L+ +
Sbjct: 387 DNKTCEDVNECDSPGACSQTCINEKGTFKCQCVEGYLRDPRNHTRCKAMEGHAS-LLFAR 445
Query: 123 RHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------- 151
RH I L DH +V + LD V
Sbjct: 446 RHDIRKISL-----DHHEMTAIVNDTKSATALDFVFRTGTIFWSDVSDQKIYKAPIDEGS 500
Query: 152 -------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
+GLA DWI HIYW D+ N IE+ + G R VL +D++ +PR +
Sbjct: 501 ERTVVIKDELTTSDGLAVDWIYNHIYWTDTGKNTIELANFEGNMRKVLIQDSLEEPRAIA 560
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
++P G W+FWTDWG P+IER GMDGS+R TI+S ++ WPNGLTLD+ +RVY+ D+K
Sbjct: 561 VNPIDG--WMFWTDWGTEPKIERAGMDGSHRPTIVSYEVKWPNGLTLDLVKKRVYWVDAK 618
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
L+ I N DG ++ LY
Sbjct: 619 LNV----------------------------------ISACNYDGKERQVI----LYSPD 640
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 367
+L + + W++WTDW + +G + I +T +
Sbjct: 641 SLQHPFSITTFED-----WVYWTDWDKQAVYRANKFNGREIAPITATHM 684
>gi|380783481|gb|AFE63616.1| prolow-density lipoprotein receptor-related protein 1 precursor
[Macaca mulatta]
Length = 4544
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 201/421 (47%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC +G+DE GC + EC HK CS C +G C C PG L
Sbjct: 2916 RCVAEVLLCNGQDDCGDGSDER-GCHINECLSHKLSGCSQDCEDLKIGFKCRCRPGFRLK 2974
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2975 DDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 3034
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 3035 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 3094
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3095 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3154
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS+RS I+ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 3155 QNG--YLYWTDWGDHSLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDY 3212
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3213 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3238
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 3239 LFEDYVY-----------WTDW-ETKSINRAHKTTGTNKTLLIST-LHRPMDLHVFHALR 3285
Query: 381 R 381
+
Sbjct: 3286 Q 3286
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 164/318 (51%), Gaps = 55/318 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CV ++++C+G DC +G+DEGP C +L + G C + C PT G C C L
Sbjct: 85 CVPMSRLCNGVQDCMDGSDEGPHCRELRGNCSRLG-CQHHCVPTLDGPTCYCNSSFQLQA 143
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLII 120
DS TC+D +EC G CSQ+CTNT GS+IC C EGY+L+ DN +CKA N L+I
Sbjct: 144 DSKTCKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPVDRPPVLLI 203
Query: 121 SNRHSILVADLE------------------------------EKGKDHRAQDIVVSGLDL 150
+N +IL L G + + + +
Sbjct: 204 ANSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDNAAQTQLKCARMPG 263
Query: 151 VEGL------------------AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
++G A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 264 LKGFVDEHTINISLSLHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELY 323
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R V
Sbjct: 324 NPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLV 381
Query: 253 YFADSKLDFIDCKSLEIK 270
Y+AD+ LD+I+ E K
Sbjct: 382 YWADAYLDYIEVVDYEGK 399
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 155/304 (50%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1159 CLPPDKLCDGNDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1216
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1217 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1276
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1277 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1336
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1337 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1396
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R T+ + WPNGLT+D +R+ + D++
Sbjct: 1397 RDGI--LFWTDWDASLPRIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDAR 1454
Query: 259 LDFI 262
D I
Sbjct: 1455 SDAI 1458
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 167/431 (38%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1855 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1911
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1912 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1971
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1972 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2029
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 2030 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGENREV 2089
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2090 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFN 2149
Query: 298 KANMDGSNASILVSGQLYE--------ALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G + A +GML C + + + E +
Sbjct: 2150 RDRQKGTNVCAVANGGCQQLCLYRGRGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 2209
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2210 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2268
Query: 396 NYDGTGRQQVI 406
N DG+ R ++
Sbjct: 2269 NDDGSRRITIV 2279
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 126/261 (48%), Gaps = 35/261 (13%)
Query: 26 PGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ----------DMNEC 74
PGC D+ EC +FG CS C+ T G LC+C + ++++ + D NE
Sbjct: 3820 PGCQDINECL-RFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIADDNEI 3878
Query: 75 EQ--PGYC----SQMCTNTKGSYI----CSCNEGYVLEYDNHTCKAINHS---AAFLIIS 121
PG+ Q + I G V + HT S AA S
Sbjct: 3879 RSLFPGHPHSAYEQAFQGDESVRIDAMDVHVKAGRVYWTNWHTGTISYRSLPPAAPPTTS 3938
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
NRH + ++G H + +SGL + G+A DW+ G++YW DS + IEV G
Sbjct: 3939 NRHRRQI----DRGVTH----LNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEVAQMKGE 3990
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++ I WP
Sbjct: 3991 NRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQDNIQWPT 4048
Query: 242 GLTLDIATRRVYFADSKLDFI 262
GL +D R+Y+AD+KL I
Sbjct: 4049 GLAVDYHNERLYWADAKLSVI 4069
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 163/405 (40%), Gaps = 88/405 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSNT--CHPTPLGALCTCPP 57
RC++ + C+ DC +G+DE C L C +C + C T A C C
Sbjct: 3753 RCLSSSLRCNMFDDCGDGSDE-EDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRS 3811
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G CQD+NEC + G CSQ+C NTKG ++CSC ++ ++ TCKA
Sbjct: 3812 GFHTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHN--TCKAEGSEYQV 3869
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L I++ + I G H A + G + V R++ ++V
Sbjct: 3870 LYIADDNEIRSL---FPGHPHSAYEQAFQGDESV-----------------RIDAMDVHV 3909
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ G ++WT+W + IS +
Sbjct: 3910 KAGR--------------------------VYWTNW---------------HTGTISYRS 3928
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P + R D + ++ L++ + + +YW D G + + +
Sbjct: 3929 L-PPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEV--- 3984
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A M G N L+SG + E A+ +D G +Y W+DWG +P+IE MD
Sbjct: 3985 -AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMD 4032
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
G+ R T++ I WP GL +D R+Y+AD+KL I +GT
Sbjct: 4033 GTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT 4077
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 485 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 543
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 544 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 603
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 604 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 661
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 662 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 721
Query: 261 FID 263
I+
Sbjct: 722 RIE 724
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 42/206 (20%)
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG-------S 304
Y + +++ I S T +++S + W+ G N ++ A M G
Sbjct: 212 TYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDNAAQTQLKCARMPGLKGFVDEH 271
Query: 305 NASILVSGQLYEALALDLENGMLYY------STLKCTR---------------------- 336
+I +S E +A+D G Y+ C R
Sbjct: 272 TINISLSLHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELYNPKGIALD 331
Query: 337 ----WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
+F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I
Sbjct: 332 PAMGKVFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYI 391
Query: 393 DFCNYDGTGRQ---QVILIDLMVEFT 415
+ +Y+G GRQ Q ILI+ + T
Sbjct: 392 EVVDYEGKGRQTIIQGILIEHLYGLT 417
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 137/353 (38%), Gaps = 63/353 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N + C+C L D TC FL+ + + I DL+
Sbjct: 1547 GPCSHLCLINYNRTVSCACPHLMKLHKDKTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1603
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1604 NYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1662
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1663 LAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1709
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I ANMDGSN ++L SGQ
Sbjct: 1710 --------------------HPLRGKLYWTD-GDN-----ISMANMDGSNRTLLFSGQKG 1743
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY W G N I R +DGS I + +
Sbjct: 1744 PVGLAIDFPESKLY-----------WISSG-NHTINRCNLDGSGLEVIDAMRSQLGKATA 1791
Query: 375 LDIATRRVYFADSKLDFIDFCN-YDGTG----RQQVILIDLMVEFTNDLMGDN 422
L I ++++AD + + C+ DG+G R L+ M + + D+
Sbjct: 1792 LAIMGDKLWWADQVSEKMGTCSKADGSGSIVLRNSTTLVMHMKVYDESIQLDH 1844
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2341 ECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2400
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2401 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2431
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 2260 IHFGNIQQINDDGSRRITIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGA 2319
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2320 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIR 2377
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2378 TPNGLAIDHRAEKLYFSDATLDKIE 2402
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3041 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 3090
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3091 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3148
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3149 ---------ALVVDVQNGYLYWTDWGDHSL 3169
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2381 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 2436
Query: 213 W 213
W
Sbjct: 2437 W 2437
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1278 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1327
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1328 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1378
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1379 ---TTLLAGDIEHPRAIALDPRDGILFWT 1404
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 26/155 (16%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 679 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 738
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIERIGMDG---------SNRSTIISTK 236
+ G+ + +LFWT++ G R+ER G+ G S R I +
Sbjct: 739 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLER-GVGGAPPTVTLLRSERPPIFEIR 793
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
+Y D ++V +++ C SL + T
Sbjct: 794 MY-------DAQQQQVGTNKCRVNNGGCSSLCLAT 821
>gi|358412256|ref|XP_003582266.1| PREDICTED: LOW QUALITY PROTEIN: prolow-density lipoprotein
receptor-related protein 1 [Bos taurus]
Length = 4544
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 200/421 (47%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC +G+DE GC + EC HK CS C +G C C PG
Sbjct: 2916 RCVAEALLCNGQDDCGDGSDER-GCHINECLSHKLSGCSQDCEDLKIGFKCRCRPGFRXK 2974
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC DM+EC CSQ C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2975 DDGRTCADMDECSTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 3034
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 3035 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 3094
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3095 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3154
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS+RS I+ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 3155 QNG--YLYWTDWGDHSLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDY 3212
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3213 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3238
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 3239 LFEDYVY-----------WTDW-ETKSINRAHKTTGTNKTLLIST-LHRPMDLHVFHALR 3285
Query: 381 R 381
+
Sbjct: 3286 Q 3286
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 155/304 (50%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1159 CLPPDKLCDGNDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1216
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1217 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1276
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1277 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1336
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1337 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1396
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R TI + WPNGLT+D +R+ + D++
Sbjct: 1397 RDGI--LFWTDWDASLPRIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDAR 1454
Query: 259 LDFI 262
D I
Sbjct: 1455 SDAI 1458
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 164/320 (51%), Gaps = 59/320 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ ++++C+G DC +G+DEG C +C H G C + C PT G C C L
Sbjct: 85 CILMSRLCNGVQDCADGSDEGSHCREQRGQCSH-LG-CQHHCVPTLNGPTCYCNNSFQLQ 142
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLI 119
D TC+D +EC G CSQ+CTNT GS+ C C EGY+L+ DN +CKA N L+
Sbjct: 143 ADGKTCKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPVLL 202
Query: 120 ISNRHS------------------------------------ILVADLEEKGK------- 136
I+N + + V D + +
Sbjct: 203 IANSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDSAAQTQLKCARMP 262
Query: 137 ------DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
D +I +S L VE +A DW+ G+ Y++D +RI VC+ NG + L
Sbjct: 263 GLKGFVDEYTINISLS-LHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLE 321
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R
Sbjct: 322 LYNPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSR 379
Query: 251 RVYFADSKLDFIDCKSLEIK 270
VY+AD+ LD+I+ E K
Sbjct: 380 LVYWADAYLDYIEVVDYEGK 399
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 168/431 (38%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1855 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1911
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1912 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1971
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1972 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2029
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DGS R +++ I WPNG+++D ++Y+ D++ D I+ LE +
Sbjct: 2030 YPRIERSRLDGSERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEDREV 2089
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2090 VLSSNNMDMFSVSVFEEFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFN 2149
Query: 298 KANMDGSNASILVSGQLYE--------ALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G + A +GML C + + + E +
Sbjct: 2150 RDRQKGTNVCAVDNGGCQQLCLYRGNGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 2209
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ + + D + +I+ + G T R++F+D I
Sbjct: 2210 KSVHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2268
Query: 396 NYDGTGRQQVI 406
N DG+GR ++
Sbjct: 2269 NDDGSGRTTIV 2279
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 125/268 (46%), Gaps = 49/268 (18%)
Query: 26 PGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMC 84
PGC D+ EC +FG CS C+ T G LC+C + ++ N C+ G Q+
Sbjct: 3820 PGCQDINECL-RFGTCSQLCNNTKGGHLCSCARNFMKTH--------NTCKAEGSEYQV- 3869
Query: 85 TNTKGSYICSCNEGYVLEYDNHTCKA-----------------INHSAAFLIISNRH--- 124
YI NE L + +H A ++ A + +N H
Sbjct: 3870 -----LYIADDNEIRSL-FPSHPHSAYEQAFQGDESVRIDAMDVHVKAGRVYWTNWHTGT 3923
Query: 125 ----SILVADLEEKGKDHRAQ------DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
S+ A HR Q + +SGL + G+A DW+ G++YW DS + IE
Sbjct: 3924 ISYRSLPPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIE 3983
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V G NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++
Sbjct: 3984 VAQMKGENRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQ 4041
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
I WP GL +D R+Y+AD+KL I
Sbjct: 4042 DNIQWPTGLAVDYHNERLYWADAKLSVI 4069
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 485 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 543
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 544 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 603
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 604 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 661
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 662 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 721
Query: 261 FID 263
I+
Sbjct: 722 RIE 724
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 166/422 (39%), Gaps = 117/422 (27%)
Query: 5 CVNLTKVCDGKTDCPNGADEGP-------------------GCDL--------------- 30
C++ CDG+ DCP+G+DE P G +L
Sbjct: 40 CISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCILMSRLCNGVQDCA 99
Query: 31 ------AECKHKFGLCS-----NTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY 79
+ C+ + G CS + C PT G C C L D TC+D +EC G
Sbjct: 100 DGSDEGSHCREQRGQCSHLGCQHHCVPTLNGPTCYCNNSFQLQADGKTCKDFDECSVYGT 159
Query: 80 CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLIISNRHSILVADLEEKGK 136
CSQ+CTNT GS+ C C EGY+L+ DN +CKA N L+I+N +IL L
Sbjct: 160 CSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPVLLIANSQNILATYLSGA-- 217
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD------------SRLNRIEVCDENGTNRI 184
+ I + + + + + W+ +R+ ++ + T I
Sbjct: 218 --QVSTITPTSTRQTTAMDFSYANETVCWVHVGDSAAQTQLKCARMPGLKGFVDEYTINI 275
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L+ ++ Q M +D G + F D + RI +G T++ ++Y P G+
Sbjct: 276 SLSLHHVEQ---MAIDWLTGN-FYFVDDIDD--RIFVCNRNGDTCVTLLDLELYNPKGIA 329
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
LD A +V+F D Y I K+ + +MDG
Sbjct: 330 LDPAMGKVFFTD------------------YGQI---------------PKVERCDMDGQ 356
Query: 305 NASILVSGQLY--EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
N + LV ++ + LDL + ++Y++ + D+ IE + +G R TI
Sbjct: 357 NRTKLVDSKIVFPHGITLDLVSRLVYWADA-------YLDY-----IEVVDYEGKGRQTI 404
Query: 363 IS 364
I
Sbjct: 405 IQ 406
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 16/137 (11%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 294 FYFVDD----IDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAMGK---------VFFT 340
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 341 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 400
Query: 402 RQ---QVILIDLMVEFT 415
RQ Q ILI+ + T
Sbjct: 401 RQTIIQGILIEHLYGLT 417
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 30/184 (16%)
Query: 232 IISTKIYWPNGLTLDIATRRVYFA-------------DSKLDFIDCKSLEIKTNVNYSTI 278
+ + ++YW N T I+ R + A D + ++ L++ + +
Sbjct: 3909 VKAGRVYWTNWHTGTISYRSLPPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWV 3968
Query: 279 FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTR 336
+YW D G + + + A M G N L+SG + E A+ +D G +Y
Sbjct: 3969 AGNVYWTDSGRDVIEV----AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-------- 4016
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
W+DWG +P+IE MDG+ R T++ I WP GL +D R+Y+AD+KL I
Sbjct: 4017 ---WSDWGNHPKIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIR 4073
Query: 397 YDGT 400
+GT
Sbjct: 4074 LNGT 4077
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 139/353 (39%), Gaps = 63/353 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C + + C+C L DN TC FL+ + + I DL+
Sbjct: 1547 GPCSHLCLIDYNRTVSCACPHLMKLHKDNTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1603
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1604 NYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1662
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1663 LAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1709
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I ANMDGSN ++L SGQ
Sbjct: 1710 --------------------HPLRGKLYWTD-GDN-----ISMANMDGSNRTLLFSGQRG 1743
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY+ + K N I R +DGS I + +
Sbjct: 1744 PVGLAIDFPESKLYWISSK------------NHTINRCNLDGSELEVIDAMRNQLGKATA 1791
Query: 375 LDIATRRVYFADSKLDFIDFCN-YDGTG----RQQVILIDLMVEFTNDLMGDN 422
L I ++++AD + + CN DG+G R L+ M + + D+
Sbjct: 1792 LAIMGDKLWWADQVSEKMGTCNKADGSGSVVLRNSTTLVMHMKVYDESIQLDH 1844
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2341 ECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2400
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2401 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2431
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 2260 IHFGNIQQINDDGSGRTTIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGA 2319
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2320 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIR 2377
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2378 TPNGLAIDHRAEKLYFSDATLDKIE 2402
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3041 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 3090
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3091 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3148
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3149 ---------ALVVDVQNGYLYWTDWGDHSL 3169
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2381 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 2436
Query: 213 W 213
W
Sbjct: 2437 W 2437
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1278 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1327
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1328 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1378
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1379 ---TTLLAGDIEHPRAIALDPRDGILFWT 1404
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 679 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 738
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIER--------IGMDGSNRSTIISTKI 237
+ G+ + +LFWT++ G R+ER + + S R I ++
Sbjct: 739 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLERGTGGAAPIVTLLRSERPPIFEIRM 794
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
Y D ++V +++ C SL + T
Sbjct: 795 Y-------DAQQQQVGTNKCRVNNGGCSSLCLAT 821
>gi|402886618|ref|XP_003906725.1| PREDICTED: LOW QUALITY PROTEIN: prolow-density lipoprotein
receptor-related protein 1 [Papio anubis]
Length = 4476
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 201/421 (47%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC +G+DE GC + EC HK CS C +G C C PG L
Sbjct: 2848 RCVAEVLLCNGQDDCGDGSDER-GCHINECLSHKLSGCSQDCEDLKIGFKCRCRPGFRLK 2906
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2907 DDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 2966
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 2967 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 3026
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3027 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3086
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS+RS I+ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 3087 QNG--YLYWTDWGDHSLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDY 3144
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3145 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3170
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 3171 LFEDYVY-----------WTDW-ETKSINRAHKTTGTNKTLLIST-LHRPMDLHVFHALR 3217
Query: 381 R 381
+
Sbjct: 3218 Q 3218
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/318 (33%), Positives = 164/318 (51%), Gaps = 55/318 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CV ++++C+G DC +G+DEGP C +L + G C + C PT G C C L
Sbjct: 85 CVPMSRLCNGVQDCMDGSDEGPHCRELRGNCSRLG-CQHHCVPTLDGPTCYCNSSFQLQA 143
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLII 120
DS TC+D +EC G CSQ+CTNT GS++C C EGY+L+ DN +CKA N L+I
Sbjct: 144 DSKTCKDFDECSVYGTCSQLCTNTDGSFVCGCVEGYLLQPDNRSCKAKNEPVDRPPVLLI 203
Query: 121 SNRHSILVADLE------------------------------EKGKDHRAQDIVVSGLDL 150
+N +IL L G + + + +
Sbjct: 204 ANSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDNAAQTQLKCARMPG 263
Query: 151 VEGL------------------AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
++G A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 264 LKGFVDEHTINISLSLHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELY 323
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R V
Sbjct: 324 NPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLV 381
Query: 253 YFADSKLDFIDCKSLEIK 270
Y+AD+ LD+I+ E K
Sbjct: 382 YWADAYLDYIEVVDYEGK 399
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 155/304 (50%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1159 CLPPDKLCDGNDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1216
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1217 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1276
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1277 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1336
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1337 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1396
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R T+ + WPNGLT+D +R+ + D++
Sbjct: 1397 RDGI--LFWTDWDASLPRIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDAR 1454
Query: 259 LDFI 262
D I
Sbjct: 1455 SDAI 1458
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 168/431 (38%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1855 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1911
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1912 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1971
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1972 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2029
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 2030 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGENREV 2089
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2090 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFN 2149
Query: 298 KANMDGSNASILVSGQ-----LYEA---LALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G LY A +GML C + + + E +
Sbjct: 2150 RDRQKGTNVCAVANGGCQQLCLYRGRGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 2209
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2210 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2268
Query: 396 NYDGTGRQQVI 406
N DG+ R ++
Sbjct: 2269 NDDGSRRITIV 2279
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 126/261 (48%), Gaps = 35/261 (13%)
Query: 26 PGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ----------DMNEC 74
PGC D+ EC +FG CS C+ T G LC+C + ++++ + D NE
Sbjct: 3752 PGCQDINECL-RFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIADDNEI 3810
Query: 75 EQ--PGYC----SQMCTNTKGSYI----CSCNEGYVLEYDNHTCKAINHS---AAFLIIS 121
PG+ Q + I G V + HT S AA S
Sbjct: 3811 RSLFPGHPHSAYEQAFQGDESVRIDAMDVHVKAGRVYWTNWHTGTISYRSLPPAAPPTTS 3870
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
NRH + ++G H + +SGL + G+A DW+ G++YW DS + IEV G
Sbjct: 3871 NRHRRQI----DRGVTH----LNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEVAQMKGE 3922
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++ I WP
Sbjct: 3923 NRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQDNIQWPT 3980
Query: 242 GLTLDIATRRVYFADSKLDFI 262
GL +D R+Y+AD+KL I
Sbjct: 3981 GLAVDYHNERLYWADAKLSVI 4001
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 163/405 (40%), Gaps = 88/405 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSNT--CHPTPLGALCTCPP 57
RC++ + C+ DC +G+DE C L C +C + C T A C C
Sbjct: 3685 RCLSSSLRCNMFDDCGDGSDE-EDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRS 3743
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G CQD+NEC + G CSQ+C NTKG ++CSC ++ ++ TCKA
Sbjct: 3744 GFHTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHN--TCKAEGSEYQV 3801
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L I++ + I G H A + G + V R++ ++V
Sbjct: 3802 LYIADDNEIRSL---FPGHPHSAYEQAFQGDESV-----------------RIDAMDVHV 3841
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ G ++WT+W + IS +
Sbjct: 3842 KAGR--------------------------VYWTNW---------------HTGTISYRS 3860
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P + R D + ++ L++ + + +YW D G + + +
Sbjct: 3861 L-PPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEV--- 3916
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A M G N L+SG + E A+ +D G +Y W+DWG +P+IE MD
Sbjct: 3917 -AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMD 3964
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
G+ R T++ I WP GL +D R+Y+AD+KL I +GT
Sbjct: 3965 GTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT 4009
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 485 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 543
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 544 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 603
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 604 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 661
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 662 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 721
Query: 261 FID 263
I+
Sbjct: 722 RIE 724
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 42/206 (20%)
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG-------S 304
Y + +++ I S T +++S + W+ G N ++ A M G
Sbjct: 212 TYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDNAAQTQLKCARMPGLKGFVDEH 271
Query: 305 NASILVSGQLYEALALDLENGMLYY------STLKCTR---------------------- 336
+I +S E +A+D G Y+ C R
Sbjct: 272 TINISLSLHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELYNPKGIALD 331
Query: 337 ----WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
+F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I
Sbjct: 332 PAMGKVFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYI 391
Query: 393 DFCNYDGTGRQ---QVILIDLMVEFT 415
+ +Y+G GRQ Q ILI+ + T
Sbjct: 392 EVVDYEGKGRQTIIQGILIEHLYGLT 417
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2341 ECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2400
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKTPLF 451
I+ C YDG+ R + L E + + + G L L G + S G L+ L
Sbjct: 2401 IERCEYDGSHR----YVSLRGELSPCRINNGGCQDLCLLTHQGHVNCSCRGGRILQDDLT 2456
Query: 452 CITRN 456
C N
Sbjct: 2457 CRAVN 2461
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 137/353 (38%), Gaps = 63/353 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N + C+C L D TC FL+ + + I DL+
Sbjct: 1547 GPCSHLCLINYNRTVSCACPHLMKLHKDKTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1603
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1604 NYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1662
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1663 LAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1709
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I ANMDGSN ++L SGQ
Sbjct: 1710 --------------------HPLRGKLYWTD-GDN-----ISMANMDGSNRTLLFSGQKG 1743
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY W G N I R +DGS I + +
Sbjct: 1744 PVGLAIDFPESKLY-----------WISSG-NHTINRCNLDGSGLEVIEAMRSQLGKATA 1791
Query: 375 LDIATRRVYFADSKLDFIDFCN-YDGTG----RQQVILIDLMVEFTNDLMGDN 422
L I ++++AD + + C+ DG+G R L+ M + + D+
Sbjct: 1792 LAIMGDKLWWADQVSEKMGTCSKADGSGSVVLRNSTTLVMHMKVYDESIQLDH 1844
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 2260 IHFGNIQQINDDGSRRITIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGA 2319
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2320 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIR 2377
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2378 TPNGLAIDHRAEKLYFSDATLDKIE 2402
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 2973 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 3022
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3023 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3080
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3081 ---------ALVVDVQNGYLYWTDWGDHSL 3101
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1278 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1327
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1328 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1378
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1379 ---TTLLAGDIEHPRAIALDPRDGILFWT 1404
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 26/155 (16%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 679 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 738
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIERIGMDG---------SNRSTIISTK 236
+ G+ + +LFWT++ G R+ER G+ G S R I +
Sbjct: 739 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLER-GVGGAPPTVTLLRSERPPIFEIR 793
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
+Y D ++V +++ C SL + T
Sbjct: 794 MY-------DAQQQQVGTNKCRVNNGGCSSLCLAT 821
>gi|355564385|gb|EHH20885.1| Prolow-density lipoprotein receptor-related protein 1 [Macaca
mulatta]
Length = 4645
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 201/421 (47%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC +G+DE GC + EC HK CS C +G C C PG L
Sbjct: 2888 RCVAEVLLCNGQDDCGDGSDER-GCHINECLSHKLSGCSQDCEDLKIGFKCRCRPGFRLK 2946
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2947 DDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 3006
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 3007 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 3066
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3067 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3126
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS+RS I+ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 3127 QNG--YLYWTDWGDHSLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDY 3184
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3185 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3210
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 3211 LFEDYVY-----------WTDW-ETKSINRAHKTTGTNKTLLIST-LHRPMDLHVFHALR 3257
Query: 381 R 381
+
Sbjct: 3258 Q 3258
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 164/318 (51%), Gaps = 55/318 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CV ++++C+G DC +G+DEGP C +L + G C + C PT G C C L
Sbjct: 57 CVPMSRLCNGVQDCMDGSDEGPHCRELRGNCSRLG-CQHHCVPTLDGPTCYCNSSFQLQA 115
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLII 120
DS TC+D +EC G CSQ+CTNT GS+IC C EGY+L+ DN +CKA N L+I
Sbjct: 116 DSKTCKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPVDRPPVLLI 175
Query: 121 SNRHSILVADLE------------------------------EKGKDHRAQDIVVSGLDL 150
+N +IL L G + + + +
Sbjct: 176 ANSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDNAAQTQLKCARMPG 235
Query: 151 VEGL------------------AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
++G A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 236 LKGFVDEHTINISLSLHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELY 295
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R V
Sbjct: 296 NPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLV 353
Query: 253 YFADSKLDFIDCKSLEIK 270
Y+AD+ LD+I+ E K
Sbjct: 354 YWADAYLDYIEVVDYEGK 371
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 155/304 (50%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1131 CLPPDKLCDGNDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1188
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1189 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1248
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1249 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1308
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1309 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1368
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R T+ + WPNGLT+D +R+ + D++
Sbjct: 1369 RDGI--LFWTDWDASLPRIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDAR 1426
Query: 259 LDFI 262
D I
Sbjct: 1427 SDAI 1430
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 168/431 (38%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1827 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1883
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1884 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1943
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1944 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2001
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 2002 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGENREV 2061
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2062 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFN 2121
Query: 298 KANMDGSNASILVSGQ-----LYEA---LALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G LY A +GML C + + + E +
Sbjct: 2122 RDRQKGTNVCAVANGGCQQLCLYRGRGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 2181
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2182 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2240
Query: 396 NYDGTGRQQVI 406
N DG+ R ++
Sbjct: 2241 NDDGSRRITIV 2251
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 173/424 (40%), Gaps = 71/424 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSNT--CHPTPLGALCTCPP 57
RC++ + C+ DC +G+DE C L C +C + C T A C C
Sbjct: 3799 RCLSSSLRCNMFDDCGDGSDE-EDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRS 3857
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G CQD+NEC + G CSQ+C NTKG ++CSC ++ ++ TCKA
Sbjct: 3858 GFHTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHN--TCKAEGSEYQV 3915
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDW--IGGHIYWLDSRLNRIEV 175
L I++ + I G H A + G + V A D G +YW + I
Sbjct: 3916 LYIADDNEIRSL---FPGHPHSAYEQAFQGDESVRIDAMDVHVKAGRVYWTNWHTGTISY 3972
Query: 176 CDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST 235
R + P T + R R G I
Sbjct: 3973 -------------------RSLPPAAPPTT----------SNRHRRQIDRGVTHLNISGL 4003
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV--P 293
K+ P G+ +D VY+ DS D I+ ++ + N T+ + IDE V P
Sbjct: 4004 KM--PRGIAIDWVAGNVYWTDSGRDVIEVAQMKGE---NRKTLISGM--IDEPHAIVVDP 4056
Query: 294 LKIGKANM-------DGSNASILV-------SGQLYEALALD---LENGMLYYSTLKCTR 336
L+ + +G NA + V + +L L L L + +L T
Sbjct: 4057 LRGWAGALGGGLWAGEGQNALLPVPSSPCAQTKKLVSCLGLPPLALRPAHTHPFSLPST- 4115
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
++W+DWG +P+IE MDG+ R T++ I WP GL +D R+Y+AD+KL I
Sbjct: 4116 -MYWSDWGNHPKIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIR 4174
Query: 397 YDGT 400
+GT
Sbjct: 4175 LNGT 4178
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 457 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 515
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 516 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 575
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 576 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 633
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 634 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 693
Query: 261 FID 263
I+
Sbjct: 694 RIE 696
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 42/206 (20%)
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG-------S 304
Y + +++ I S T +++S + W+ G N ++ A M G
Sbjct: 184 TYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDNAAQTQLKCARMPGLKGFVDEH 243
Query: 305 NASILVSGQLYEALALDLENGMLYY------STLKCTR---------------------- 336
+I +S E +A+D G Y+ C R
Sbjct: 244 TINISLSLHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELYNPKGIALD 303
Query: 337 ----WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
+F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I
Sbjct: 304 PAMGKVFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYI 363
Query: 393 DFCNYDGTGRQ---QVILIDLMVEFT 415
+ +Y+G GRQ Q ILI+ + T
Sbjct: 364 EVVDYEGKGRQTIIQGILIEHLYGLT 389
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 137/353 (38%), Gaps = 63/353 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N + C+C L D TC FL+ + + I DL+
Sbjct: 1519 GPCSHLCLINYNRTVSCACPHLMKLHKDKTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1575
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1576 NYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1634
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1635 LAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1681
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I ANMDGSN ++L SGQ
Sbjct: 1682 --------------------HPLRGKLYWTD-GDN-----ISMANMDGSNRTLLFSGQKG 1715
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY W G N I R +DGS I + +
Sbjct: 1716 PVGLAIDFPESKLY-----------WISSG-NHTINRCNLDGSGLEVIDAMRSQLGKATA 1763
Query: 375 LDIATRRVYFADSKLDFIDFCN-YDGTG----RQQVILIDLMVEFTNDLMGDN 422
L I ++++AD + + C+ DG+G R L+ M + + D+
Sbjct: 1764 LAIMGDKLWWADQVSEKMGTCSKADGSGSIVLRNSTTLVMHMKVYDESIQLDH 1816
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2313 ECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2372
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2373 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2403
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 2232 IHFGNIQQINDDGSRRITIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGA 2291
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2292 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIR 2349
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2350 TPNGLAIDHRAEKLYFSDATLDKIE 2374
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3013 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 3062
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3063 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3120
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3121 ---------ALVVDVQNGYLYWTDWGDHSL 3141
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2353 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 2408
Query: 213 W 213
W
Sbjct: 2409 W 2409
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1250 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1299
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1300 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1350
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1351 ---TTLLAGDIEHPRAIALDPRDGILFWT 1376
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 26/155 (16%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 651 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 710
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIERIGMDG---------SNRSTIISTK 236
+ G+ + +LFWT++ G R+ER G+ G S R I +
Sbjct: 711 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLER-GVGGAPPTVTLLRSERPPIFEIR 765
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
+Y D ++V +++ C SL + T
Sbjct: 766 MY-------DAQQQQVGTNKCRVNNGGCSSLCLAT 793
>gi|260820014|ref|XP_002605330.1| hypothetical protein BRAFLDRAFT_120630 [Branchiostoma floridae]
gi|229290663|gb|EEN61340.1| hypothetical protein BRAFLDRAFT_120630 [Branchiostoma floridae]
Length = 4206
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/263 (41%), Positives = 158/263 (60%), Gaps = 22/263 (8%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAE--CKHKFGLCSNTCHPTPLGALCTCPPGEI 60
D CV+ +CD K DCP+G DEGP C C + G C C + G +C C G +
Sbjct: 141 DTCVHFDVLCDNKPDCPSGDDEGPHCTSLPRLCANGRGDCEEACTVSREGRVCFCRNGYV 200
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
+S D TC+D+NEC+ PGYC Q C NT GSY CSC GY L+ D TCKA N ++A L++
Sbjct: 201 VSPDR-TCKDLNECKLPGYCDQHCENTVGSYTCSCAPGYTLQSDKKTCKAQNSNSAVLVV 259
Query: 121 SNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG 180
+NR + + +L + VE +AYDW+ G++Y+ D +R+ CD+ G
Sbjct: 260 ANRQKLDMLNLND-----------------VEQMAYDWMTGNMYFTDDEADRVFACDKQG 302
Query: 181 TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 240
+ + +D I PRG+ LDP+ G +F +D+G PRIE+ MDG+NRS I+++KI P
Sbjct: 303 RVCVTVIEDRIANPRGIALDPTRGL--MFLSDYGSTPRIEKAHMDGTNRSQIVTSKIVLP 360
Query: 241 NGLTLDIATRRVYFADSKLDFID 263
+G+ LDI T+ VY+ D+ L++I+
Sbjct: 361 HGIALDIVTQTVYWVDAYLNYIE 383
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 119/344 (34%), Positives = 172/344 (50%), Gaps = 65/344 (18%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEG---PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGE 59
+RC+ L VC+ +C +G+DEG P ++ EC G C + C P G CTC G
Sbjct: 3597 NRCIKLDLVCNNYDNCGDGSDEGLCGPP-NVNECATNNGNCQHKCTDLPRGHYCTCRDGY 3655
Query: 60 ILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEG--------------------Y 99
L D TC+D++EC G CSQ+CTNTKGSY CSC+ G Y
Sbjct: 3656 ALGADLTTCEDIDECADFGRCSQICTNTKGSYHCSCSAGFMKAQRGNGVETCIAQGDPDY 3715
Query: 100 VLEYDNHTCKAIN----------------------------HSAAFLIISNRHSILVADL 131
+L D++ K IN + AF ++ +SI A +
Sbjct: 3716 LLIADDNAIKRINPDSTHDGAGDSFVGNDETRVESMDIDVQSNTAFWSNAHTNSIYRAAI 3775
Query: 132 E-EKGKDHRAQDIVVSGLDLVE---GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
G+ R DI+ +D +E G+A DW+G HIYW D+R + +EV D +GTNR L
Sbjct: 3776 RLGNGRRKRQADIIKLDIDDLEEPRGIAIDWVGRHIYWTDARKDALEVADLDGTNRKTLL 3835
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ +P + +DP G ++FWTDWG +P+IER +DG R ++ + WP GL +D
Sbjct: 3836 NTGMDRPHSVAVDPKNG--YVFWTDWGLSPKIERARLDGLERRVLVREDLQWPTGLAIDY 3893
Query: 248 ATRRVYFADSKLDFIDCKSLEIKTN-----VNYSTIFRKLYWID 286
RR+Y+AD+K + I +S++ N NYS R+ Y ID
Sbjct: 3894 QNRRLYWADAKKNTI--ESIDFDGNGRVVAANYSKGLRQPYLID 3935
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 152/287 (52%), Gaps = 32/287 (11%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ K C+ K DCP+G+DEG CD+ +C K G CS+ C P P+G +C CP L D
Sbjct: 1149 CLTPEKFCNKKRDCPDGSDEGKLCDILDCDIKNGGCSHICQPWPMGVVCLCPDDLRLGAD 1208
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAA-----FLI 119
+ TC+++ CEQ G CSQ+CT SY YV+ + H + ++ S+ L+
Sbjct: 1209 NKTCEEVKWCEQLGICSQICTPVGKSYRYPATP-YVVFSNRHELRRVDLSSKDFQYRVLV 1267
Query: 120 ISNRHSILV---------------------ADLEEKGKDHRAQDIVVSGLDLVEGLAYDW 158
R++I + ++ G + +V +GL EGLA DW
Sbjct: 1268 PGLRNTIAIDYDLSTNSLFWTDVVEDKIFKGNMSSTGGISSIRPVVQTGLATAEGLAVDW 1327
Query: 159 IGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN-P 217
+G ++YW++S L++IEV NG R L + + PR + LDP G +LFWTDW N
Sbjct: 1328 VGKNMYWVESNLDQIEVARLNGMYRTTLIAEEMESPRAIALDPRVG--YLFWTDWQSNRA 1385
Query: 218 RIERIGMDGSNRSTI--ISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
RIER M G+NRS I ++ WPNGLT+D R+++ D+K D I
Sbjct: 1386 RIERCDMSGTNRSVIHWVANDGGWPNGLTVDYLDSRIFWVDAKSDSI 1432
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 150/312 (48%), Gaps = 62/312 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG---CDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGE 59
RC+ + CD DC + +DE P C EC +F C+ C P+G C C G
Sbjct: 2753 RCIPSSWTCDRDNDCNDNSDEAPSNPKCGRNECLDAEFNNCTQVCKDLPIGFRCRCHKGY 2812
Query: 60 ILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFL 118
+ + C+D++EC CSQ C NT GSY C C EGY + CKA + ++
Sbjct: 2813 RM--NGYVCEDIDECNTEFPCSQYCVNTYGSYRCRCAEGYNRDPAQPGVCKAASDVKPYV 2870
Query: 119 IISNRHSILVADLEEKGKDHRAQDIVVSGL--------DLVE------------------ 152
+ SNR+ I D R +IV+ GL D+ E
Sbjct: 2871 MFSNRYYIRKVDFS-----GRTYEIVLGGLNNAVALDFDIQEEMIYWTDVTTQRSMIRRA 2925
Query: 153 -------------------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
G+A DW+G ++YW D + IEV NG R VL KD + +
Sbjct: 2926 HVNSSNFEVLHSTALSNPDGIAVDWVGRNLYWCDKAKDVIEVSKLNGDYRKVLYKDGLKE 2985
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS---TKIYWPNGLTLDIATR 250
PR ++++P G +L+WTDWGENP I R +DGS+ II+ TKI WPNGLT+D T+
Sbjct: 2986 PRALVVEPQGG--YLYWTDWGENPHIGRAWLDGSHGQVIINSTRTKIGWPNGLTIDYVTK 3043
Query: 251 RVYFADSKLDFI 262
R+++ D++ D I
Sbjct: 3044 RIFWGDAREDHI 3055
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 81/130 (62%), Gaps = 11/130 (8%)
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
D V GL+ EG+A DWIGG++YW D LN I V +GT+R L N+T PR +++DP
Sbjct: 586 DFVKGGLNNCEGVAVDWIGGNLYWTDDGLNTISVSRLDGTHRKTLISGNMTHPRSIVVDP 645
Query: 202 SPGTRWLFWTDWGEN------PRIERIGMDGSNRSTIIS---TKIYWPNGLTLDIATRRV 252
+ G ++W+DW ++ +IE+ MDG+NR +++ T I WPNGL LD + ++
Sbjct: 646 TSGM--MYWSDWVDDITDERFAKIEQAWMDGTNRKDLVNREKTTILWPNGLALDHTSNKL 703
Query: 253 YFADSKLDFI 262
Y+AD+ D I
Sbjct: 704 YWADAFYDKI 713
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 166/419 (39%), Gaps = 79/419 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSN-TCHPTPLGAL----CTCPPG 58
RC+ VCD DC +G+DE C C C N C P+ C
Sbjct: 2714 RCIQAAWVCDHDNDCGDGSDEKE-CTYTTCAPDQFQCKNGRCIPSSWTCDRDNDCNDNSD 2772
Query: 59 EILSNDSVTCQDMNECEQPGY--CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAA 116
E SN NEC + C+Q+C + + C C++GY + + + C+ I+
Sbjct: 2773 EAPSNPKCG---RNECLDAEFNNCTQVCKDLPIGFRCRCHKGYRM--NGYVCEDIDECNT 2827
Query: 117 FLIIS----NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNR 172
S N + E AQ V V+ Y + S
Sbjct: 2828 EFPCSQYCVNTYGSYRCRCAEGYNRDPAQPGVCKAASDVKP----------YVMFSNRYY 2877
Query: 173 IEVCDENG-TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD-WGENPRIERIGMDGSNRS 230
I D +G T IVL N + LD ++WTD + I R ++ SN
Sbjct: 2878 IRKVDFSGRTYEIVLGGLN----NAVALDFDIQEEMIYWTDVTTQRSMIRRAHVNSSNFE 2933
Query: 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN 290
+ ST + P+G+ +D + R LYW D+ +
Sbjct: 2934 VLHSTALSNPDGIAVDW------------------------------VGRNLYWCDKAKD 2963
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
+ + + ++G +L L E AL +E Y L+WTDWGENP I
Sbjct: 2964 VIEV----SKLNGDYRKVLYKDGLKEPRALVVEPQGGY---------LYWTDWGENPHIG 3010
Query: 351 RIGMDGSNRSTIIS---TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
R +DGS+ II+ TKI WPNGLT+D T+R+++ D++ D I F DG+ Q VI
Sbjct: 3011 RAWLDGSHGQVIINSTRTKIGWPNGLTIDYVTKRIFWGDAREDHIQFAEADGSNIQTVI 3069
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ + + VEGLA DW+ +IYW D + + IEV NG+ R V+ ++ +PR +++ P
Sbjct: 1842 IITTDMGRVEGLAVDWVAKNIYWTDQQFDLIEVARWNGSFRRVIVSTDLDKPRDIVVHPM 1901
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLDF 261
G ++FW+DWG +IER MDGS R + + T + WPNG+ +D T VY+ D+ +
Sbjct: 1902 LG--YIFWSDWGTQQKIERAAMDGSQRIVLYNGTGLQWPNGMAVDYQTNMVYWVDANSNR 1959
Query: 262 ID 263
I+
Sbjct: 1960 IE 1961
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 128/329 (38%), Gaps = 68/329 (20%)
Query: 154 LAYDWIGGHIYWLDSRLNR-IEVCDENGTNRIVLA---KDNITQPRGMMLDPSPGTRWLF 209
LA D IG +YW++S NR + C+ +GT+ +A + N+++P + + G ++
Sbjct: 1670 LAMDHIGKRLYWINS--NRTVSSCNLDGTDMRTIAGAVQQNMSRPHALAV----GGNLMY 1723
Query: 210 WTDWGENPRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRR------VYFADSKLDF 261
W D + + +DGS +TK+ D+ TR +Y ++
Sbjct: 1724 WGDHASDQIMVASKVDGSGMKVFRGRTTKVMDIKIFDSDVQTRTGLSEFILYSVHEEIRG 1783
Query: 262 IDCKSLEIKTNVNYSTIFR---------------KLYWIDEGGNGVPLKIGKANMDGSNA 306
I + + + R +YW+D + + N +
Sbjct: 1784 IQLDPQQTNEQSDALSPIRGSALAVAIDFLAENDTIYWVDTAMKSI--HVSNRNQTWQDT 1841
Query: 307 SILVSGQLYEALALDLENGMLYYST-----LKCTRW------------------------ 337
I E LA+D +Y++ ++ RW
Sbjct: 1842 IITTDMGRVEGLAVDWVAKNIYWTDQQFDLIEVARWNGSFRRVIVSTDLDKPRDIVVHPM 1901
Query: 338 ---LFWTDWGENPRIERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLDFID 393
+FW+DWG +IER MDGS R + + T + WPNG+ +D T VY+ D+ + I+
Sbjct: 1902 LGYIFWSDWGTQQKIERAAMDGSQRIVLYNGTGLQWPNGMAVDYQTNMVYWVDANSNRIE 1961
Query: 394 FCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
DG + ++ + F L GDN
Sbjct: 1962 RIGIDGNNHRYILTTENQDLFAISLYGDN 1990
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 86/167 (51%), Gaps = 26/167 (15%)
Query: 241 NGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
N L +A R+ KLD ++ +E + Y + +Y+ D+ + ++ +
Sbjct: 253 NSAVLVVANRQ------KLDMLNLNDVE---QMAYDWMTGNMYFTDDEAD----RVFACD 299
Query: 301 MDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSN 358
G ++ ++ +ALD G++ F +D+G PRIE+ MDG+N
Sbjct: 300 KQGRVCVTVIEDRIANPRGIALDPTRGLM-----------FLSDYGSTPRIEKAHMDGTN 348
Query: 359 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
RS I+++KI P+G+ LDI T+ VY+ D+ L++I+ +Y+G R+ +
Sbjct: 349 RSQIVTSKIVLPHGIALDIVTQTVYWVDAYLNYIESVDYNGYNRRTI 395
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 110/283 (38%), Gaps = 64/283 (22%)
Query: 98 GYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYD 157
G +Y N T K I +S I +L+ ++ Q I+V + VEGLAY
Sbjct: 2129 GLAFDYGNGTNKRIFYS----------DIHHGNLQSVYENGTGQKIIVENVGSVEGLAYH 2178
Query: 158 WIGGHIYWL---DSRLNRIEV--CDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
++W DS + R + N ++ PR ++LD G W WT+
Sbjct: 2179 RRNDELFWTSYTDSNIRRFSLNQTKPGARNETIVVLSQEDHPRAIVLDECQGRIW--WTN 2236
Query: 213 WGE-NPRIERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W + +P I + G +I+ + I PNGL +D A ++Y++D+ LD
Sbjct: 2237 WNDKSPSIMTSYIGGQEVVSIVQGSDIRTPNGLAIDHAAEKLYWSDATLD---------- 2286
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
KI + N DGSN +++ + + G+ Y
Sbjct: 2287 ------------------------KIERCNYDGSNRVVILQVEPVHSF------GLAVYG 2316
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
+++WTDW + +DGSN + S P G+
Sbjct: 2317 D-----YIYWTDWVRRSVMAANKLDGSNVKVLRSDISQQPMGI 2354
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 108/231 (46%), Gaps = 48/231 (20%)
Query: 173 IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI 232
I + E+ T+++V + ++ PR D T +++++D + RI R + G +
Sbjct: 520 ISLTPEDYTDKMVPIE-HLDNPRA--FDYHAATSYVYFSDPTQF-RIGRQKITGEGHQIL 575
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
+++ Y +G DF+ L V I LYW D+G N +
Sbjct: 576 VNSTFYNEDG-----------------DFVK-GGLNNCEGVAVDWIGGNLYWTDDGLNTI 617
Query: 293 PLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN---- 346
+ + +DG++ L+SG + ++ +D +GM+Y W+DW ++
Sbjct: 618 SV----SRLDGTHRKTLISGNMTHPRSIVVDPTSGMMY-----------WSDWVDDITDE 662
Query: 347 --PRIERIGMDGSNRSTIIS---TKIYWPNGLTLDIATRRVYFADSKLDFI 392
+IE+ MDG+NR +++ T I WPNGL LD + ++Y+AD+ D I
Sbjct: 663 RFAKIEQAWMDGTNRKDLVNREKTTILWPNGLALDHTSNKLYWADAFYDKI 713
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 147/362 (40%), Gaps = 68/362 (18%)
Query: 80 CSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH 138
CS +C G+Y C C + Y L+ DN TC+ FL+ + + + DL + +
Sbjct: 1469 CSHLCLIGYNGAYACRCPQRYKLKADNKTCEL---DGKFLLYARQLEVRGVDLLKPYYNM 1525
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNITQPRGM 197
+ + + + V + +D + IYW+D R + NG++ ++ ++T G+
Sbjct: 1526 MSA-LTLPHIGNVTAVDFDALEERIYWVDLRFPAVRRAFLNGSDVETLVTSQDLTNTVGI 1584
Query: 198 MLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+D +R L+W T++GE I +DGS + T+ ++L+
Sbjct: 1585 AVDWL--SRNLYWTTNFGEKKSIVVSQLDGSFKRTL---------NMSLNAPGYMAVHPS 1633
Query: 257 SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE 316
L ++W D G VP IG+AN DGS+ S +V
Sbjct: 1634 EGL----------------------IFWSD--GGDVPY-IGRANADGSSVSQIVQNVTTM 1668
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI---ISTKIYWPNGL 373
+LA+D LY W+ N + +DG++ TI + + P+ L
Sbjct: 1669 SLAMDHIGKRLY--------WI-----NSNRTVSSCNLDGTDMRTIAGAVQQNMSRPHAL 1715
Query: 374 TLDIATRRVYFADSKLDFIDFCN-YDGTGRQ-----QVILIDLMVEFTNDLMGDNGVPAL 427
+ +Y+ D D I + DG+G + ++D+ + F +D+ G+
Sbjct: 1716 A--VGGNLMYWGDHASDQIMVASKVDGSGMKVFRGRTTKVMDIKI-FDSDVQTRTGLSEF 1772
Query: 428 AL 429
L
Sbjct: 1773 IL 1774
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 71/144 (49%), Gaps = 12/144 (8%)
Query: 281 KLYWIDEGGNGVP-LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLF 339
+L+W + + + + N +I+V Q A+ L+ +C ++
Sbjct: 2183 ELFWTSYTDSNIRRFSLNQTKPGARNETIVVLSQEDHPRAIVLD---------ECQGRIW 2233
Query: 340 WTDWGE-NPRIERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
WT+W + +P I + G +I+ + I PNGL +D A ++Y++D+ LD I+ CNY
Sbjct: 2234 WTNWNDKSPSIMTSYIGGQEVVSIVQGSDIRTPNGLAIDHAAEKLYWSDATLDKIERCNY 2293
Query: 398 DGTGRQQVILIDLMVEFTNDLMGD 421
DG+ R ++ ++ + F + GD
Sbjct: 2294 DGSNRVVILQVEPVHSFGLAVYGD 2317
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 107/270 (39%), Gaps = 51/270 (18%)
Query: 80 CSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
C +C +K + IC C G+ L+ D C+A + FLI S ++ + +D
Sbjct: 469 CQDICLLAGSKDAKICRCRPGFTLKPDGK-CEA-STDDTFLIYSKSRPGVIKGISLTPED 526
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA---------- 187
+ + + + LD Y ++Y+ D RI G +L
Sbjct: 527 YTDKMVPIEHLDNPRAFDYHAATSYVYFSDPTQFRIGRQKITGEGHQILVNSTFYNEDGD 586
Query: 188 --KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
K + G+ +D G L+WTD G N I +DG++R T+IS + P + +
Sbjct: 587 FVKGGLNNCEGVAVDWIGGN--LYWTDDGLNT-ISVSRLDGTHRKTLISGNMTHPRSIVV 643
Query: 246 DIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305
D + +Y++D W+D+ + KI +A MDG+N
Sbjct: 644 DPTSGMMYWSD---------------------------WVDDITDERFAKIEQAWMDGTN 676
Query: 306 ASILVSGQLY-----EALALDLENGMLYYS 330
LV+ + LALD + LY++
Sbjct: 677 RKDLVNREKTTILWPNGLALDHTSNKLYWA 706
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 21/157 (13%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRW----LFWTDWGENPRI 349
+IG+ + G ILV+ Y D G L W L+WTD G N I
Sbjct: 560 FRIGRQKITGEGHQILVNSTFYNEDG-DFVKGGLNNCEGVAVDWIGGNLYWTDDGLNT-I 617
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA-------DSKLDFIDFCNYDGTGR 402
+DG++R T+IS + P + +D + +Y++ D + I+ DGT R
Sbjct: 618 SVSRLDGTHRKTLISGNMTHPRSIVVDPTSGMMYWSDWVDDITDERFAKIEQAWMDGTNR 677
Query: 403 QQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYS 439
+ DL+ ++ NG LALD + LY++
Sbjct: 678 K-----DLVNREKTTILWPNG---LALDHTSNKLYWA 706
>gi|431914039|gb|ELK15301.1| Prolow-density lipoprotein receptor-related protein 1 [Pteropus
alecto]
Length = 4544
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 199/421 (47%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +CDG+ DC +G+DE GC + EC HK CS C +G C C PG L
Sbjct: 2916 RCVAEALLCDGQDDCGDGSDER-GCHVNECLSHKLSGCSQDCEDLKIGFKCRCRPGFRLK 2974
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2975 DDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 3034
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + L+ D+R Q I
Sbjct: 3035 NRYYLRKLHLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 3094
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3095 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3154
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS RS I+ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 3155 QNG--YLYWTDWGDHSLIGRIGMDGSGRSVIVDTKITWPNGLTLDYVTERIYWADAREDY 3212
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN ++++ + AL
Sbjct: 3213 IE----------------------------------FASLDGSNRHVVLNQDIPHIFALT 3238
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 3239 LFEDYVY-----------WTDW-ETKSINRAHKTTGANKTPLIST-LHRPMDLHVFHALR 3285
Query: 381 R 381
+
Sbjct: 3286 Q 3286
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 162/318 (50%), Gaps = 55/318 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ ++++C+G DC +G+DEGP C C + C PT G C C L D
Sbjct: 85 CILMSRLCNGVQDCMDGSDEGPHCRELRGNCSQLGCQHHCVPTFNGPTCYCNNSFQLQAD 144
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLIIS 121
TC+D +EC G CSQ+CTNT GS+ C C EGY+L+ DN +CKA N L+I+
Sbjct: 145 GKTCKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPVLLIA 204
Query: 122 NRHSIL------------------------------------VADLEEKGK--------- 136
N +IL V D + +
Sbjct: 205 NSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDSAAQTQLKCARMPGL 264
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
D +I +S L VE +A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 265 KGFVDEHTINISLS-LHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELY 323
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R V
Sbjct: 324 NPKGIALDPTMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLV 381
Query: 253 YFADSKLDFIDCKSLEIK 270
Y+AD+ LD+I+ E K
Sbjct: 382 YWADAYLDYIEVVDYEGK 399
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 155/304 (50%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1159 CLPPDKLCDGNDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1216
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1217 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1276
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1277 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1336
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1337 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1396
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R TI + WPNGLT+D +R+ + D++
Sbjct: 1397 RDGI--LFWTDWDASLPRIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDAR 1454
Query: 259 LDFI 262
D I
Sbjct: 1455 SDAI 1458
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 144/322 (44%), Gaps = 68/322 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSNT--CHPTPLGALCTCPP 57
RC++ + C+ DC +G+DE C L C +C + C T A C C
Sbjct: 3753 RCLSSSLRCNMFDDCGDGSDE-EDCSIDPKLTSCATNASICGDEARCVRTENAAYCACRS 3811
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G CQD+NEC + G CSQ+C NTKG ++CSC ++ ++ TCKA
Sbjct: 3812 GFHTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHN--TCKAEGSEYQV 3869
Query: 118 LII-----------SNRHS-------------ILVADLEEKG------------------ 135
L I S+ HS I D+ K
Sbjct: 3870 LYIADDNEIRSLFPSHPHSAYEQAFQGDETVRIDAMDVHVKAGRVYWTNWHTGTISYRSL 3929
Query: 136 ---------KDHRAQ------DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG 180
HR Q + +SGL + G+A DW+ G++YW D+ + IEV G
Sbjct: 3930 PPAAPPTTSNRHRRQIDGGVTHLNISGLKMPRGIAIDWVAGNVYWTDAGRDVIEVAQMKG 3989
Query: 181 TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 240
NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++ I WP
Sbjct: 3990 ENRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQDNIQWP 4047
Query: 241 NGLTLDIATRRVYFADSKLDFI 262
GL +D R+Y+AD+KL I
Sbjct: 4048 TGLAVDYHNERLYWADAKLSVI 4069
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 169/431 (39%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1855 GDCSQLCLPTSESTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1911
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1912 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1971
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1972 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2029
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 2030 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGENREV 2089
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2090 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFN 2149
Query: 298 KANMDGSNASILVSGQLYE--------ALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G + A +GML C + + + E +
Sbjct: 2150 RDRQKGTNVCAVANGGCQQLCLYRGGGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 2209
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G++ R++F+D I
Sbjct: 2210 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAGISPGTPN-RIFFSDIHFGNIQQI 2268
Query: 396 NYDGTGRQQVI 406
N DG+GR ++
Sbjct: 2269 NDDGSGRTTIV 2279
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 485 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 543
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 544 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 603
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 604 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 661
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 662 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 721
Query: 261 FID 263
I+
Sbjct: 722 RIE 724
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 16/137 (11%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 294 FYFVDD----IDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPTMGK---------VFFT 340
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 341 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 400
Query: 402 RQ---QVILIDLMVEFT 415
RQ Q ILI+ + T
Sbjct: 401 RQTIIQGILIEHLYGLT 417
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 30/184 (16%)
Query: 232 IISTKIYWPNGLTLDIATRRVYFA-------------DSKLDFIDCKSLEIKTNVNYSTI 278
+ + ++YW N T I+ R + A D + ++ L++ + +
Sbjct: 3909 VKAGRVYWTNWHTGTISYRSLPPAAPPTTSNRHRRQIDGGVTHLNISGLKMPRGIAIDWV 3968
Query: 279 FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTR 336
+YW D G + + + A M G N L+SG + E A+ +D G +Y
Sbjct: 3969 AGNVYWTDAGRDVIEV----AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-------- 4016
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
W+DWG +P+IE MDG+ R T++ I WP GL +D R+Y+AD+KL I
Sbjct: 4017 ---WSDWGNHPKIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIR 4073
Query: 397 YDGT 400
+GT
Sbjct: 4074 LNGT 4077
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 130/328 (39%), Gaps = 59/328 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N + C+C L DN TC FL+ + + I DL+
Sbjct: 1547 GPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1603
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1604 NYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1662
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1663 LAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1709
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I ANMDGSN ++L SGQ
Sbjct: 1710 --------------------HPLRGKLYWTD-GDN-----ISMANMDGSNRTLLFSGQKG 1743
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY+ + + N I R +DG+ I +
Sbjct: 1744 PVGLAIDFPESKLYWISSR------------NHTINRCNLDGTELEVINTMWNQLGKATA 1791
Query: 375 LDIATRRVYFADSKLDFIDFCN-YDGTG 401
L I ++++AD + + CN DG+G
Sbjct: 1792 LAIMGDKLWWADQVSEKMGTCNKADGSG 1819
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2341 ECQNLMFWTNWNEQHPSIMRAALSGANALTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2400
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2401 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2431
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 2260 IHFGNIQQINDDGSGRTTIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGA 2319
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2320 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANALTLIEKDIR 2377
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2378 TPNGLAIDHRAEKLYFSDATLDKIE 2402
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K ++DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3041 KLHLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 3090
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3091 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3148
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3149 ---------ALVVDVQNGYLYWTDWGDHSL 3169
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Query: 112 NHSAAFLIISNRHSILVADLEEKGKD-HRAQDIVVSGLDLVE-------GLAYDWIGGHI 163
+H AF++ ++ + + E+ RA + L L+E GLA D +
Sbjct: 2332 DHPRAFVLDECQNLMFWTNWNEQHPSIMRAALSGANALTLIEKDIRTPNGLAIDHRAEKL 2391
Query: 164 YWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTDW
Sbjct: 2392 YFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTDW 2437
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1278 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1327
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1328 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1378
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1379 ---TTLLAGDIEHPRAIALDPRDGILFWT 1404
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 679 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETVLLNGTDRKIVYE 738
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIER--------IGMDGSNRSTIISTKI 237
+ G+ + +LFWT++ G R+ER + + S R I ++
Sbjct: 739 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLERGTGGAPPTVTLLRSERPPIFEIRM 794
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
Y D ++V +++ C SL + T
Sbjct: 795 Y-------DAQQQQVGTNKCRVNNGGCSSLCLAT 821
>gi|417515788|gb|JAA53703.1| prolow-density lipoprotein receptor-related protein 1 precursor [Sus
scrofa]
Length = 4544
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 200/421 (47%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC +G+DE GC + EC HK CS C +G C C PG L
Sbjct: 2916 RCVAEALLCNGQDDCGDGSDER-GCHVNECLSHKLSGCSQDCEDLKIGFKCRCRPGFRLK 2974
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2975 DDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 3034
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 3035 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 3094
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3095 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3154
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS RS I+ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 3155 QNG--YLYWTDWGDHSLIGRIGMDGSGRSVIVDTKITWPNGLTLDYVTERIYWADAREDY 3212
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3213 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3238
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 3239 LFEDYVY-----------WTDW-ETKSINRAHKTTGTNKTLLIST-LHRPMDLHVFHALR 3285
Query: 381 R 381
+
Sbjct: 3286 Q 3286
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 166/320 (51%), Gaps = 59/320 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ ++++C+G DC +G+DEGP C +C H G C + C PT G C C L
Sbjct: 85 CILMSRLCNGIQDCADGSDEGPHCREQRGQCSH-LG-CQHHCVPTLNGPTCYCNNSFQLQ 142
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLI 119
D TC+D +EC G CSQ+CTNT GS+ C C EGY+L+ DN +CKA N L+
Sbjct: 143 ADGKTCKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPVLL 202
Query: 120 ISNRHSIL------------------------------------VADLEEKGK------- 136
I+N +IL V D + +
Sbjct: 203 IANSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDSAAQTQLKCARMP 262
Query: 137 ------DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
D +I +S L VE +A DW+ G+ Y++D +RI VC+ NG + L
Sbjct: 263 GLKGFVDEHTINISLS-LHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLE 321
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R
Sbjct: 322 LYNPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSR 379
Query: 251 RVYFADSKLDFIDCKSLEIK 270
VY+AD+ LD+I+ E K
Sbjct: 380 LVYWADAYLDYIEVVDYEGK 399
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 155/304 (50%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1159 CLPPDKLCDGNDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1216
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1217 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1276
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1277 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1336
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1337 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1396
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R TI + WPNGLT+D +R+ + D++
Sbjct: 1397 RDGI--LFWTDWDASLPRIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDAR 1454
Query: 259 LDFI 262
D I
Sbjct: 1455 SDAI 1458
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 167/431 (38%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1855 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1911
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1912 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1971
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1972 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2029
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+ LE +
Sbjct: 2030 YPRIERSRLDGTERVVLVNVSISWPNGISVDYEDGKLYWCDARTDKIERIDLETGEDREV 2089
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2090 VLSSNNMDMFSVSVFEEFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFN 2149
Query: 298 KANMDGSNASILVSGQLYE--------ALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G + A +GML C + + + E +
Sbjct: 2150 RDRQKGTNVCAVANGGCQQLCLYRGGGQRACACAHGMLAEDGATCREYAGYLLYSERTIL 2209
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2210 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2268
Query: 396 NYDGTGRQQVI 406
N DG+ R ++
Sbjct: 2269 NDDGSSRTTIV 2279
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 125/268 (46%), Gaps = 49/268 (18%)
Query: 26 PGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMC 84
PGC D+ EC +FG CS C+ T G LC+C + ++ N C+ G Q+
Sbjct: 3820 PGCQDINECL-RFGTCSQLCNNTKGGHLCSCARNFMKTH--------NTCKAEGSEYQV- 3869
Query: 85 TNTKGSYICSCNEGYVLEYDNHTCKA-----------------INHSAAFLIISNRH--- 124
YI NE L + +H A ++ A + +N H
Sbjct: 3870 -----LYIADDNEIRSL-FPSHPHSAYEQAFQGDESVRIDAMDVHVKAGRVYWTNWHTGT 3923
Query: 125 ----SILVADLEEKGKDHRAQ------DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
S+ A HR Q + +SGL + G+A DW+ G++YW DS + IE
Sbjct: 3924 ISFRSLPPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIE 3983
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V G NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++
Sbjct: 3984 VAQMKGENRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQ 4041
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
I WP GL +D R+Y+AD+KL I
Sbjct: 4042 DNIQWPTGLAVDYHNERLYWADAKLSVI 4069
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 485 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 543
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 544 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 603
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 604 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 661
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 662 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 721
Query: 261 FID 263
I+
Sbjct: 722 RIE 724
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 16/137 (11%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 294 FYFVDD----IDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAMGK---------VFFT 340
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 341 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 400
Query: 402 RQ---QVILIDLMVEFT 415
RQ Q ILI+ + T
Sbjct: 401 RQTIIQGILIEHLYGLT 417
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 30/184 (16%)
Query: 232 IISTKIYWPNGLTLDIATRRVYFA-------------DSKLDFIDCKSLEIKTNVNYSTI 278
+ + ++YW N T I+ R + A D + ++ L++ + +
Sbjct: 3909 VKAGRVYWTNWHTGTISFRSLPPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWV 3968
Query: 279 FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTR 336
+YW D G + + + A M G N L+SG + E A+ +D G +Y
Sbjct: 3969 AGNVYWTDSGRDVIEV----AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-------- 4016
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
W+DWG +P+IE MDG+ R T++ I WP GL +D R+Y+AD+KL I
Sbjct: 4017 ---WSDWGNHPKIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIR 4073
Query: 397 YDGT 400
+GT
Sbjct: 4074 LNGT 4077
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 138/353 (39%), Gaps = 63/353 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N + C+C L DN TC FL+ + + I DL+
Sbjct: 1547 GPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1603
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1604 NYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1662
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R L+WT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1663 LAVDWV--SRNLYWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1709
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I ANMDGSN ++L SGQ
Sbjct: 1710 --------------------HPLRGKLYWTD-GDN-----ISMANMDGSNRTLLFSGQRG 1743
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY+ + K N I R +DGS I +
Sbjct: 1744 PVGLAIDFPESKLYWISSK------------NHTINRCNLDGSGLEVIDAMWSQLGKATA 1791
Query: 375 LDIATRRVYFADSKLDFIDFCN-YDGTG----RQQVILIDLMVEFTNDLMGDN 422
L I ++++AD + + CN DG+G R L+ M + + D+
Sbjct: 1792 LAIMGDKLWWADQVSEKMGTCNKADGSGSVVLRNSTTLVMHMKVYDESIQLDH 1844
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 135/348 (38%), Gaps = 83/348 (23%)
Query: 78 GYCSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G C Q+C G C+C G + E D TC+ A +L+ S R + L
Sbjct: 2164 GGCQQLCLYRGGGQRACACAHGMLAE-DGATCREY---AGYLLYSERTILKSIHL----S 2215
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
D R + V + E + N I LA D
Sbjct: 2216 DERNLNAPVQPFEDPEHMK--------------------------NVIALAFD------- 2242
Query: 197 MMLDPSPGT-RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
SPGT +F++D I++I DGS+R+TI+ + GL +Y+
Sbjct: 2243 YRAGTSPGTPNRIFFSDI-HFGNIQQINDDGSSRTTIVEN-VGSVEGLAYHRGWDTLYW- 2299
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
T+ STI R + +D+ G + M G +
Sbjct: 2300 ---------------TSYTTSTITR--HTVDQTRPGAFERETVITMSGDDHP-------- 2334
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLT 374
A LD +C +FWT+W E +P I R + G+N T+I I PNGL
Sbjct: 2335 RAFVLD-----------ECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLA 2383
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+D ++YF+D+ LD I+ C YDG+ R ++ + + F + G++
Sbjct: 2384 IDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2431
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3041 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 3090
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3091 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3148
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3149 ---------ALVVDVQNGYLYWTDWGDHSL 3169
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2381 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 2436
Query: 213 W 213
W
Sbjct: 2437 W 2437
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1278 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1327
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1328 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1378
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1379 ---TTLLAGDIEHPRAIALDPRDGILFWT 1404
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 679 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 738
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIER--------IGMDGSNRSTIISTKI 237
+ G+ + +LFWT++ G R+ER + + S R I ++
Sbjct: 739 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLERGTGGAPPIVTLLRSERPPIFEIRM 794
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
Y D ++V +++ C SL + T
Sbjct: 795 Y-------DAQQQQVGTNKCRVNNGGCSSLCLAT 821
>gi|301761302|ref|XP_002916050.1| PREDICTED: LOW QUALITY PROTEIN: prolow-density lipoprotein
receptor-related protein 1-like [Ailuropoda melanoleuca]
Length = 4552
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 141/420 (33%), Positives = 195/420 (46%), Gaps = 91/420 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +CDG+ DC +G+DE GC + EC K CS C +G C C PG L
Sbjct: 2916 RCVAEALLCDGQDDCGDGSDER-GCHVNECLSRKLSGCSQDCEDLKIGFKCRCRPGFRLK 2974
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2975 DDGRTCADVDECSTTFPCSQRCVNTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 3034
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 3035 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 3094
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3095 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3154
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS RS I+ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 3155 QNG--YLYWTDWGDHSLIGRIGMDGSGRSVIVDTKITWPNGLTLDYVTERIYWADAREDY 3212
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3213 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3238
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 381
L +Y WTDW E I R T++++ ++ P L + A R+
Sbjct: 3239 LFEDYVY-----------WTDW-ETKSINRAHKTTGTNKTLLTSTLHRPMDLHVFHALRQ 3286
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 163/318 (51%), Gaps = 55/318 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV ++++C+G DC +G+DEGP C + C + C PT G C C L D
Sbjct: 87 CVLMSRLCNGVQDCADGSDEGPHCRELQGPCSQLGCQHHCVPTLNGPTCYCNNSFQLQAD 146
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLIIS 121
TC+D +EC G CSQ+CTNT GS+ C C EGY+L+ DN +CKA N L+I+
Sbjct: 147 GKTCKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPVLLIA 206
Query: 122 NRHSIL------------------------------------VADLEEKGK--------- 136
N +IL V D + +
Sbjct: 207 NSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDSAAQTQLKCARMPGL 266
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
D +I +S L VE +A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 267 KGFVDEHTINISLS-LHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELY 325
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R V
Sbjct: 326 NPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLV 383
Query: 253 YFADSKLDFIDCKSLEIK 270
Y+AD+ LD+I+ E K
Sbjct: 384 YWADAYLDYIEVVDYEGK 401
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 156/304 (51%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ L K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1159 CLPLDKLCDGNDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1216
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1217 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1276
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1277 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1336
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1337 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1396
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R TI + WPNGLT+D +R+ + D++
Sbjct: 1397 RDGI--LFWTDWDASLPRIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDAR 1454
Query: 259 LDFI 262
D I
Sbjct: 1455 SDAI 1458
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 169/431 (39%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1855 GDCSQLCLPTSESTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1911
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1912 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1971
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1972 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2029
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 2030 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGENREV 2089
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2090 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFN 2149
Query: 298 KANMDGSNASILVSGQ-----LYEA---LALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G LY A +GML C + + + E +
Sbjct: 2150 RDRQKGTNVCAVANGGCQQLCLYRGGGQRACACAHGMLAEDGAACREYAGYLLYSERTIL 2209
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2210 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2268
Query: 396 NYDGTGRQQVI 406
N DG+GR ++
Sbjct: 2269 NDDGSGRTTIV 2279
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 85/148 (57%), Gaps = 10/148 (6%)
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
AA SNRH + ++G H + +SGL + G+A DW+ G++YW DS + IE
Sbjct: 3937 AAPPTTSNRHRRQI----DRGVTH----LNISGLKMPRGIAIDWVAGNVYWTDSGRDVIE 3988
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V G NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++
Sbjct: 3989 VAQMKGENRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQ 4046
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
I WP GL +D R+Y+AD+KL I
Sbjct: 4047 DNIQWPTGLAVDYHNERLYWADAKLSVI 4074
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 487 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 545
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 546 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 605
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 606 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 663
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 664 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 723
Query: 261 FID 263
I+
Sbjct: 724 RIE 726
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 16/137 (11%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 296 FYFVDD----IDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAMGK---------VFFT 342
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 343 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 402
Query: 402 RQ---QVILIDLMVEFT 415
RQ Q ILI+ + T
Sbjct: 403 RQTIIQGILIEHLYGLT 419
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 30/184 (16%)
Query: 232 IISTKIYWPNGLTLDIATRRVYFA-------------DSKLDFIDCKSLEIKTNVNYSTI 278
+ + ++YW N T I+ R + A D + ++ L++ + +
Sbjct: 3914 VKAGRVYWTNWHTGTISYRSLPPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWV 3973
Query: 279 FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTR 336
+YW D G + + + A M G N L+SG + E A+ +D G +Y
Sbjct: 3974 AGNVYWTDSGRDVIEV----AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-------- 4021
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
W+DWG +P+IE MDG+ R T++ I WP GL +D R+Y+AD+KL I
Sbjct: 4022 ---WSDWGNHPKIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIR 4078
Query: 397 YDGT 400
+GT
Sbjct: 4079 LNGT 4082
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 131/333 (39%), Gaps = 59/333 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N + C+C L DN TC FL+ + + I DL+
Sbjct: 1547 GPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1603
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1604 NYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1662
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1663 LAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1709
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I ANMDGSN ++L SGQ
Sbjct: 1710 --------------------HPLHGKLYWTD-GDN-----ISMANMDGSNRTLLFSGQKG 1743
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY W G N I R +DGS I + +
Sbjct: 1744 PVGLAIDFPESKLY-----------WISSG-NHTISRCNLDGSGLEVIDAMRSQLGKATA 1791
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
L I ++++AD + + CN G + V+L
Sbjct: 1792 LAIMGDKLWWADQVSEKMGTCN-KADGSESVVL 1823
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2341 ECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2400
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2401 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2431
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 2260 IHFGNIQQINDDGSGRTTIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGA 2319
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2320 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIR 2377
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2378 TPNGLAIDHRAEKLYFSDATLDKIE 2402
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3041 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 3090
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3091 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3148
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3149 ---------ALVVDVQNGYLYWTDWGDHSL 3169
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2381 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 2436
Query: 213 W 213
W
Sbjct: 2437 W 2437
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1278 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1327
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1328 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1378
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1379 ---TTLLAGDIEHPRAIALDPRDGILFWT 1404
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 17/121 (14%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 681 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 740
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIER--------IGMDGSNRSTIISTKI 237
+ G+ + +LFWT++ G R+ER + + S R I ++
Sbjct: 741 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLERGAGSAPPTVTLLRSERPPIFEIRM 796
Query: 238 Y 238
Y
Sbjct: 797 Y 797
>gi|126540381|emb|CAL47126.1| lipophorin receptor [Blattella germanica]
Length = 863
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 140/404 (34%), Positives = 191/404 (47%), Gaps = 88/404 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGP-GCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ + KVCD K DCPN DE C ECK G CS C TP G C C G L
Sbjct: 310 CIPIAKVCDKKPDCPNWEDEPTDKCGKNECKENNGGCSQLCVDTPGGYYCDCRRGFKLM- 368
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D+ TC D+NECE PG CSQ C N KG++ C C EGY+ + +HT CKA+ A+ L+ +
Sbjct: 369 DNRTCDDVNECEVPGTCSQSCINEKGTFKCQCVEGYLRDPRDHTRCKAMEGHAS-LLFAR 427
Query: 123 RHSILVADLEEK--------GKDHRAQDIV----------VSGLDLV------------- 151
RH I L+ K A D V VS L +
Sbjct: 428 RHDIRKISLDHHEMTAIVNDTKSATALDFVFRTGMIFWSDVSDLKIYKAPIDEGTERTVV 487
Query: 152 --------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+GLA DWI HIYW D+ N IE+ + G R +L +D++ +PR + ++P
Sbjct: 488 IKDELTTSDGLAVDWIYNHIYWTDTGKNTIELANFEGNMRKMLIQDSLEEPRAIAVNPID 547
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G W+FWTDWG P+IER GMDGS+RSTI+S ++ WPNGLTLD+ +RVY+ D+KL+
Sbjct: 548 G--WMFWTDWGTEPKIERAGMDGSHRSTIVSYEVKWPNGLTLDLVKKRVYWVDAKLNV-- 603
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
I N DG + ++ LY AL
Sbjct: 604 --------------------------------ISSCNYDGQDRRVI----LYSPDALQHP 627
Query: 324 NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 367
+ + W++WTDW + + +G + I +T +
Sbjct: 628 FSITTFED-----WVYWTDWDKQAVYKANKFNGKDVEPITATHM 666
>gi|291409329|ref|XP_002720990.1| PREDICTED: low density lipoprotein receptor-related protein 1
[Oryctolagus cuniculus]
Length = 4544
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 144/421 (34%), Positives = 200/421 (47%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC +G+DE GC + EC HK CS C +G C C PG L
Sbjct: 2916 RCVAEALLCNGQDDCGDGSDER-GCHVNECLSHKLSGCSQDCEDLKIGFKCRCRPGFRLK 2974
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEY-DNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C N+ GSY C C EGY D H+CKA+ FLI +
Sbjct: 2975 DDGRTCADVDECSTTFPCSQRCINSHGSYKCLCVEGYAPRAGDPHSCKAVTDEEPFLIFA 3034
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 3035 NRYYLRRLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 3094
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3095 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3154
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS RS I+ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 3155 QNG--YLYWTDWGDHSLIGRIGMDGSRRSVIVDTKITWPNGLTLDYVTERIYWADAREDY 3212
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3213 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3238
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 3239 LFEDYVY-----------WTDW-ETKSINRAHKTTGANKTLLIST-LHRPMDLHVFHALR 3285
Query: 381 R 381
+
Sbjct: 3286 Q 3286
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 166/319 (52%), Gaps = 57/319 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CV ++++C+G DC +G+DEGP C +L + G C + C PT G C C L
Sbjct: 85 CVPMSRLCNGVQDCVDGSDEGPHCRELRGNCSRLG-CQHHCVPTLSGPTCYCNSSFQLQA 143
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLII 120
D TC+D +EC G CSQ+CTNT GS+ C C EGY+L+ DN +CKA N L+I
Sbjct: 144 DGKTCKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPVLLI 203
Query: 121 SNRHSIL------------------------------------VADLEEKGK-------- 136
+N +IL V D + +
Sbjct: 204 ANSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDSAAQTQLKCARMPG 263
Query: 137 -----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI 191
D +I +S L VE +A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 264 LKGFVDEHTINISLS-LHHVEQMAIDWLTGNFYFVDDIDDRIFVCNHNGDTCVTLLDLEL 322
Query: 192 TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R
Sbjct: 323 YNPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRL 380
Query: 252 VYFADSKLDFIDCKSLEIK 270
VY+AD+ LD+I+ E K
Sbjct: 381 VYWADAYLDYIEVVDYEGK 399
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 155/304 (50%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1159 CLPPDKLCDGHDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1216
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1217 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1276
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1277 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1336
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1337 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1396
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R T+ + WPNGLT+D +R+ + D++
Sbjct: 1397 RDGI--LFWTDWDASLPRIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDAR 1454
Query: 259 LDFI 262
D I
Sbjct: 1455 SDAI 1458
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 194/476 (40%), Gaps = 120/476 (25%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSN-------------------TC 44
+C+ VCD DC +G+DE P C+ C C+N
Sbjct: 2829 QCIPKHFVCDHDRDCADGSDESPECEYPTCGPSEFRCANGRCLSSRQWECXGENDCLDHS 2888
Query: 45 HPTPLGALCTCPPGE------------------ILSNDSVTCQD--------MNEC--EQ 76
P CT P + +L N C D +NEC +
Sbjct: 2889 DEAPKNPHCTSPEHKCNVSSQFLCSSGRCVAEALLCNGQDDCGDGSDERGCHVNECLSHK 2948
Query: 77 PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR--------HSILV 128
CSQ C + K + C C G+ L+ D TC ++ + S R + V
Sbjct: 2949 LSGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECSTTFPCSQRCINSHGSYKCLCV 3008
Query: 129 ADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK 188
+ D + V + I + Y+L RLN +G+N +L K
Sbjct: 3009 EGYAPRAGDPHSCKAVTDEEPFL-------IFANRYYL-RRLNL------DGSNYTLL-K 3053
Query: 189 DNITQPRGMMLDPSPGTRWLFWTD-WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ + LD + ++WTD + I R+ ++GSN + T + P+GL +D
Sbjct: 3054 QGLNN--AVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQVLHRTGLSNPDGLAVDW 3111
Query: 248 ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307
+ LYW D+G + + + + ++G+ +
Sbjct: 3112 ------------------------------VGGNLYWCDKGRDTIEV----SKLNGAYRT 3137
Query: 308 ILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
+LVS L E AL +D++NG LY WTDWG++ I RIGMDGS RS I+ T
Sbjct: 3138 VLVSSGLREPRALVVDVQNGYLY-----------WTDWGDHSLIGRIGMDGSRRSVIVDT 3186
Query: 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
KI WPNGLTLD T R+Y+AD++ D+I+F + DG+ R V+ D+ F L D
Sbjct: 3187 KITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVVLSQDIPHIFALTLFED 3242
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 165/405 (40%), Gaps = 88/405 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSN--TCHPTPLGALCTCPP 57
RC++ + C+ DC +G+DE GC L C +C + C T A C C P
Sbjct: 3753 RCLSSSLRCNLLDDCGDGSDE-EGCSMDPKLTSCATNASICGDEAXCVRTEKAAYCACRP 3811
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G CQD+NEC + G CSQ+C NTKG ++CSC ++ ++ TCKA
Sbjct: 3812 GFNTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHN--TCKAEGSEYQV 3869
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L I++ + I G H A + G + V R++ ++V
Sbjct: 3870 LYIADDNEIRSL---FPGHPHSAYEQAFQGDESV-----------------RIDAMDVHV 3909
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ G ++WT+W + IS +
Sbjct: 3910 KAGR--------------------------VYWTNW---------------HTGTISYRS 3928
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P + R D + ++ L++ + + +YW D G + + +
Sbjct: 3929 L-PPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEV--- 3984
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A M G N L+SG + E A+ +D G +Y W+DWG +P+IE MD
Sbjct: 3985 -AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMD 4032
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
G+ R T++ I WP GL +D R+Y+AD+KL I +GT
Sbjct: 4033 GTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT 4077
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 171/431 (39%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1855 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1911
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1912 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1971
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1972 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2029
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI--------DCKSL 267
PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I D + +
Sbjct: 2030 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGDSREV 2089
Query: 268 EIKTN----VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ +N + S +YW D + VPL+ G
Sbjct: 2090 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFN 2149
Query: 298 KANMDGSNASILVSGQ-----LYEA---LALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G LY A +GML C + + + E +
Sbjct: 2150 RDRQKGTNVCAVANGGCQQLCLYRGGGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 2209
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2210 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2268
Query: 396 NYDGTGRQQVI 406
N DG+GR ++
Sbjct: 2269 NDDGSGRTTIV 2279
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 485 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 543
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 544 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 603
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 604 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 661
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 662 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 721
Query: 261 FID 263
I+
Sbjct: 722 RIE 724
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 16/137 (11%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 294 FYFVDD----IDDRIFVCNHNGDTCVTLLDLELYNPKGIALDPAMGK---------VFFT 340
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 341 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 400
Query: 402 RQ---QVILIDLMVEFT 415
RQ Q ILI+ + T
Sbjct: 401 RQTIIQGILIEHLYGLT 417
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 137/353 (38%), Gaps = 63/353 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N + C+C L DN TC FL+ + + I DL+
Sbjct: 1547 GPCSHLCLINYNRTVSCACPHLMKLHQDNTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1603
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1604 NYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1662
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1663 LAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1709
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I ANMDGSN ++L S Q
Sbjct: 1710 --------------------HPLRGKLYWTD-GDN-----ISMANMDGSNRTLLFSAQKG 1743
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY W G N I R +DGS I + +
Sbjct: 1744 PVGLAIDFPESKLY-----------WISSG-NHTINRCNLDGSGLEVIDAMRSQLGKATA 1791
Query: 375 LDIATRRVYFADSKLDFIDFCN-YDGTG----RQQVILIDLMVEFTNDLMGDN 422
L I ++++AD + + CN DG+G R L+ M + + D+
Sbjct: 1792 LAIMGDKLWWADQVSEKMGTCNKADGSGAVVLRNSTTLVMHMKVYDESIQLDH 1844
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2341 ECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2400
Query: 392 IDFCNYDGTGRQQVILIDLMVEF 414
I+ C YDG+ R ++ + + F
Sbjct: 2401 IERCEYDGSHRYVILKSEPVHPF 2423
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 69/146 (47%), Gaps = 11/146 (7%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD---SRLNRIEVCDENGT- 181
I ++++ D + +V + VEGLAY +YW S + R V D++
Sbjct: 2260 IHFGNIQQINDDGSGRTTIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTV-DQSRPG 2318
Query: 182 ---NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKI 237
V+ PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2319 AFERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDI 2376
Query: 238 YWPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2377 RTPNGLAIDHRAEKLYFSDATLDKIE 2402
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
+ N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3041 RLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 3090
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3091 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3148
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3149 ---------ALVVDVQNGYLYWTDWGDHSL 3169
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + + +FWTD
Sbjct: 2381 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGQHIFWTD 2436
Query: 213 W 213
W
Sbjct: 2437 W 2437
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1278 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1327
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1328 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1378
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1379 ---TTLLAGDIEHPRAIALDPRDGILFWT 1404
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 26/155 (16%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 679 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 738
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIERIGMDG---------SNRSTIISTK 236
+ G+ + +LFWT++ G R+ER G+ G S R I +
Sbjct: 739 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLER-GVGGAPPTVTLLRSERPPIFEIR 793
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
+Y D ++V +++ C SL + T
Sbjct: 794 MY-------DAQQQQVGTNKCRVNNGGCSSLCLAT 821
>gi|426226765|ref|XP_004007507.1| PREDICTED: LOW QUALITY PROTEIN: prolow-density lipoprotein
receptor-related protein 1 [Ovis aries]
Length = 4536
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 146/425 (34%), Positives = 203/425 (47%), Gaps = 93/425 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC + +DE GC + EC HK CS C +G C C PG L
Sbjct: 2901 RCVAEALLCNGQDDCGDSSDER-GCHVNECLSHKLSGCSQDCEDLKIGFKCRCRPGFRLK 2959
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEY-DNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2960 DDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 3019
Query: 122 NRHSILVADLEEKGK---------------DHRAQ----------------------DIV 144
NR+ + +L+ D+R Q D+
Sbjct: 3020 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSDVQ 3079
Query: 145 V---SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
V +GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3080 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3139
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS+RS I+ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 3140 QNG--YLYWTDWGDHSLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDY 3197
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3198 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3223
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 3224 LFEDYVY-----------WTDW-ETKSINRAHKTTGANKTLLIST-LHRPMDLHVFHALR 3270
Query: 381 RVYFA 385
+ A
Sbjct: 3271 QPDVA 3275
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 145/303 (47%), Gaps = 65/303 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ K+CDG DC +G+DEG CD +C G C G L D
Sbjct: 1151 CLPPDKLCDGNDDCGDGSDEGELCD--QCSLNNGGCL----------------GMELGPD 1192
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNRH
Sbjct: 1193 NHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNRH 1252
Query: 125 SILVADLEE------------------------------------KGK--DHRA----QD 142
I DL + +GK D+ A +
Sbjct: 1253 EIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFEV 1312
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1313 VIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDPR 1372
Query: 203 PGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSKL 259
G LFWTDW + PRIE M G+ R TI + WPNGLT+D +R+ + D++
Sbjct: 1373 DGI--LFWTDWDASLPRIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDARS 1430
Query: 260 DFI 262
D I
Sbjct: 1431 DAI 1433
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 168/430 (39%), Gaps = 107/430 (24%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1830 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1886
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1887 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1946
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PRG+ + G +LFWT+WG+
Sbjct: 1947 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRGITVRSRVG--YLFWTEWGQ 2004
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DGS R +++ I WPNG+++D ++Y+ D++ D I+ LE +
Sbjct: 2005 YPRIERSRLDGSERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEDREV 2064
Query: 273 ---------VNYSTIFRKLYWIDE---------------------GGNGVPLK----IGK 298
+ S +YW D G GV LK +
Sbjct: 2065 VLSSNNMDMFSVSVFEEFIYWSDRTHANGSIKRGSKDNATDSVPLXGIGVQLKDIKVFNR 2124
Query: 299 ANMDGSNASILVSGQ-----LYEA---LALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
G+N + +G LY A +GML C + + + E ++
Sbjct: 2125 DRQKGTNVCAVDNGGGPQLCLYRGNGQRACACAHGMLAEDGASCREYAGYLLYSERTILK 2184
Query: 351 RIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
+ + D + +I+ + G T R++F+D I N
Sbjct: 2185 SVHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQIN 2243
Query: 397 YDGTGRQQVI 406
DG+GR ++
Sbjct: 2244 DDGSGRTTIV 2253
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 85/148 (57%), Gaps = 10/148 (6%)
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
AA SNRH + ++G H + +SGL + G+A DW+ G++YW DS + IE
Sbjct: 3928 AAPPTTSNRHRRQI----DRGVTH----LNISGLKMPRGIAIDWVAGNVYWTDSGRDVIE 3979
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V G NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++
Sbjct: 3980 VAQMKGENRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQ 4037
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
I WP GL +D R+Y+AD+KL I
Sbjct: 4038 DNIQWPTGLAVDYHNERLYWADAKLSVI 4065
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 164/379 (43%), Gaps = 76/379 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ ++++C+G DC +G+DEGP C +C H G C + C PT G C C L
Sbjct: 65 CILMSRLCNGVQDCADGSDEGPHCREQRGQCSH-LG-CQHHCVPTLNGPACYCNTSFQLQ 122
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLI 119
D TC+D +EC G CSQ+CTNT GS+ C C EGY+L+ DN +CKA N L+
Sbjct: 123 ADGKTCKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPVLL 182
Query: 120 ISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD------------ 167
I+N +IL L + I + + + + + W+
Sbjct: 183 IANSQNILATYLSGA----QVSTITPTSTRQTTAMDFSYANETVCWVHVGDSAAQTQLKC 238
Query: 168 SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227
+R+ ++ + T I L+ ++ Q M +D G + F D + RI +G
Sbjct: 239 ARMPGLKGFVDEYTINISLSLHHVEQ---MAIDWLTGN-FYFVDDIDD--RIFVCNRNGD 292
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDE 287
T++ ++Y P G+ LD A +V+F D Y I
Sbjct: 293 TCVTLLDLELYNPKGIALDPAMGKVFFTD------------------YGQI--------- 325
Query: 288 GGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTRWLFWTDWGE 345
K+ + +MDG N + LV ++ + LDL + ++Y++ + D+
Sbjct: 326 ------PKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADA-------YLDY-- 370
Query: 346 NPRIERIGMDGSNRSTIIS 364
IE + +G R TII
Sbjct: 371 ---IEVVDYEGKGRQTIIQ 386
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 465 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 523
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 524 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 583
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 584 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 641
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 642 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 701
Query: 261 FID 263
I+
Sbjct: 702 RIE 704
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 16/137 (11%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 274 FYFVDD----IDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAMGK---------VFFT 320
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 321 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 380
Query: 402 RQ---QVILIDLMVEFT 415
RQ Q ILI+ + T
Sbjct: 381 RQTIIQGILIEHLYGLT 397
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 30/184 (16%)
Query: 232 IISTKIYWPNGLTLDIATRRVYFA-------------DSKLDFIDCKSLEIKTNVNYSTI 278
+ + ++YW N T I+ R + A D + ++ L++ + +
Sbjct: 3905 VKAGRVYWTNWHTGTISYRSLPPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWV 3964
Query: 279 FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTR 336
+YW D G + + + A M G N L+SG + E A+ +D G +Y
Sbjct: 3965 AGNVYWTDSGRDVIEV----AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-------- 4012
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
W+DWG +P+IE MDG+ R T++ I WP GL +D R+Y+AD+KL I
Sbjct: 4013 ---WSDWGNHPKIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIR 4069
Query: 397 YDGT 400
+GT
Sbjct: 4070 LNGT 4073
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 139/353 (39%), Gaps = 63/353 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C + + C+C L DN TC FL+ + + I DL+
Sbjct: 1522 GPCSHLCLIDYNRTVSCACPHLMKLHKDNTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1578
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1579 NYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1637
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1638 LAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1684
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I ANMDGSN ++L SGQ
Sbjct: 1685 --------------------HPLRGKLYWTD-GDN-----ISMANMDGSNRTLLFSGQRG 1718
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY+ + K N I R +DGS I + +
Sbjct: 1719 PVGLAIDFPESKLYWISSK------------NHTINRCNLDGSELEVIDTMRNQLGKATA 1766
Query: 375 LDIATRRVYFADSKLDFIDFCN-YDGTG----RQQVILIDLMVEFTNDLMGDN 422
L I ++++AD + + CN DG+G R L+ M + + D+
Sbjct: 1767 LAIMGDKLWWADQVSEKMGTCNKADGSGSVVLRNSTTLVMHMKVYDESIQLDH 1819
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2315 ECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2374
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2375 IERCEYDGSRRYVILKSEPVHPFGLAVYGEH 2405
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 2234 IHFGNIQQINDDGSGRTTIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGA 2293
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2294 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIR 2351
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2352 TPNGLAIDHRAEKLYFSDATLDKIE 2376
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3026 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 3075
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
S+ + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3076 SDVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3133
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3134 ---------ALVVDVQNGYLYWTDWGDHSL 3154
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G+ R V+ K P G+ + +FWTD
Sbjct: 2355 GLAIDHRAEKLYFSDATLDKIERCEYDGSRRYVILKSEPVHPFGLAV----YGEHIFWTD 2410
Query: 213 W 213
W
Sbjct: 2411 W 2411
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1253 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1302
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1303 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1353
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1354 ---TTLLAGDIEHPRAIALDPRDGILFWT 1379
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 17/121 (14%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 659 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 718
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIER--------IGMDGSNRSTIISTKI 237
+ G+ + +LFWT++ G R+ER + + S R I ++
Sbjct: 719 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLERGTGGAAPIVTLLRSERPPIFEIRM 774
Query: 238 Y 238
Y
Sbjct: 775 Y 775
>gi|395540951|ref|XP_003772412.1| PREDICTED: prolow-density lipoprotein receptor-related protein
1-like, partial [Sarcophilus harrisii]
Length = 3562
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 203/421 (48%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV+ + VC+G+ DC +G+DE C + EC K CS C +G C C PG L
Sbjct: 2941 RCVSESLVCNGQNDCGDGSDER-SCHINECLSRKLSGCSQDCEDLKIGYKCRCRPGFRLK 2999
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEY-DNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 3000 DDGRTCADVDECSTSFPCSQRCINTHGSYKCLCVEGYAPRGGDAHSCKAVTDEEPFLIFA 3059
Query: 122 NRHSILVADLE-------EKGK--------DHRAQDIV---------------------- 144
NR+ + +L+ ++G D+R Q I
Sbjct: 3060 NRYYLRKLNLDGTNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMNINGSNVQ 3119
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3120 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3179
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS RS ++ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 3180 QNG--YLYWTDWGDHSLIGRIGMDGSGRSVVVDTKITWPNGLTLDYVTERIYWADAREDY 3237
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN I++S + AL
Sbjct: 3238 IE----------------------------------FASLDGSNRHIVLSQDIPHIFALT 3263
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 3264 LFEDFVY-----------WTDW-ETKSINRAHKTTGANKTLLIST-LHRPMDLHVFHALR 3310
Query: 381 R 381
+
Sbjct: 3311 Q 3311
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/317 (34%), Positives = 164/317 (51%), Gaps = 53/317 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV ++++C+G DC +G DEG C C + C PT G C C L +D
Sbjct: 150 CVPMSRLCNGVQDCFDGTDEGAHCRELRANCSRAGCQHHCVPTLSGPSCYCNSSFQLQSD 209
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLIIS 121
+ +C+D +EC G CSQ+CTNT G++ CSC EGY+L+ DN +CKA N A L+I+
Sbjct: 210 NKSCKDFDECSVYGTCSQVCTNTDGAFTCSCVEGYLLQPDNRSCKAKNEPVDRPAVLLIA 269
Query: 122 NRHSIL--------VADLEEKGK---------------------DHRAQDIVVSG----- 147
N +IL V + G D+ AQ ++
Sbjct: 270 NSQNILATYLSGVPVPTITPTGTRQTTAMDFSYANETVCWVHVGDNAAQTLLKCARMPGL 329
Query: 148 --------------LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
L VE +A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 330 KGFVEEYSINISLSLHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDVELYN 389
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY
Sbjct: 390 PKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVY 447
Query: 254 FADSKLDFIDCKSLEIK 270
+AD+ LD+I+ E K
Sbjct: 448 WADAYLDYIEVVDYEGK 464
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 156/304 (51%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G LC+CP G L+
Sbjct: 1185 CLTPDKLCDGNDDCGDGSDEGDLCD--QCSLNNGGCSHNCSVAPGEGILCSCPLGMELAP 1242
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG++LE D +C++++ F+I SNR
Sbjct: 1243 DNHTCQIQSYCAKHLKCSQKCEQNKFSVKCSCYEGWMLEPDGESCQSLDPFKPFIIFSNR 1302
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1303 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1362
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1363 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMRTTLLAGDIEHPRAIALDP 1422
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R TI + WPNGLT+D +R+ + D++
Sbjct: 1423 RDGI--LFWTDWDASLPRIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDAR 1480
Query: 259 LDFI 262
D I
Sbjct: 1481 SDAI 1484
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 167/440 (37%), Gaps = 107/440 (24%)
Query: 69 QDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
Q N C G CSQ+C T + + C C GY L C+ + +FL+ S I
Sbjct: 1871 QGTNPCSVNNGDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGI 1927
Query: 127 LVADLEEKGK----------------DHRA-------------------------QDIVV 145
L+ K D A +D+V
Sbjct: 1928 RGIPLDPNDKSDALVPVSGTSLAVGIDFHADNDTIYWVDMGLSTISRAKRDQTWREDVVT 1987
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+G+ VEG+A DWI G+IYW D + IEV NG+ R V+ + +PR + + P G
Sbjct: 1988 NGIGRVEGIAVDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG- 2046
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+LFWT+WG+ PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+
Sbjct: 2047 -YLFWTEWGQYPRIERSRLDGTERVVLVNVSISWPNGISVDYEDGKLYWCDARTDKIERI 2105
Query: 266 SLEIKTN------------VNYSTIFRKLYWIDE--------------GGNGVPLKIG-- 297
LE N + S +YW D + VPL+ G
Sbjct: 2106 DLETGENREVVLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIG 2165
Query: 298 ----------KANMDGSNASILVSGQ-----LYEA---LALDLENGMLYYSTLKCTRWLF 339
+ G+N +G LY A +GML C +
Sbjct: 2166 VQLKDIKVFNRDRQKGTNVCATSNGGCQQLCLYRGDGRRACACAHGMLAEDGASCREYAG 2225
Query: 340 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA-------------TRRVYFAD 386
+ + E ++ + + P + IA R++F+D
Sbjct: 2226 YLLYSERTILKSVHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAAGSPGTANRIFFSD 2285
Query: 387 SKLDFIDFCNYDGTGRQQVI 406
I N DG+GR ++
Sbjct: 2286 IHFGNIQQINDDGSGRVTIV 2305
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 550 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 608
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 609 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 668
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 669 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 726
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 727 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 786
Query: 261 FID 263
I+
Sbjct: 787 RIE 789
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 75/125 (60%), Gaps = 13/125 (10%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 359 FYFVDD----IDDRIFVCNRNGDTCVTLLDVELYNPKGIALDPAMGK---------VFFT 405
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 406 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 465
Query: 402 RQQVI 406
RQ +I
Sbjct: 466 RQTII 470
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 131/328 (39%), Gaps = 59/328 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N + C+C L+ DN TC FL+ + + I DL+
Sbjct: 1573 GPCSHLCLINYNRTVSCACPHLMKLDKDNTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1629
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1630 NYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1688
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1689 LAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1735
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I A++DGSN S+L SGQ
Sbjct: 1736 --------------------HPLHGKLYWTD-GDN-----ISMASLDGSNRSLLFSGQKG 1769
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY W G N I R +DGS I + +
Sbjct: 1770 PVGLAIDFPENKLY-----------WISSG-NHTINRCNLDGSGLEVIDTMRSQLGKATA 1817
Query: 375 LDIATRRVYFADSKLDFIDFCN-YDGTG 401
L I ++++AD + + CN DG+G
Sbjct: 1818 LAIMGDKLWWADQVSEKMGTCNKADGSG 1845
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2367 ECQNLMFWTNWNEQHPSIMRAALSGANVLTLIERDIRTPNGLAIDHRAEKLYFSDATLDK 2426
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2427 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2457
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI--EVCDENGT-- 181
I ++++ D + +V + VEGLAY +YW + I D+N
Sbjct: 2286 IHFGNIQQINDDGSGRVTIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQNRAGA 2345
Query: 182 --NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
V+ PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2346 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANVLTLIERDIR 2403
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2404 TPNGLAIDHRAEKLYFSDATLDKIE 2428
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 29/213 (13%)
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
++YW + T A +R + + ++ + L + + R L+W N +
Sbjct: 1654 RVYWSDVRTQ--AIKRAFINGTGVETVVSADLPNAHGLAVDWVSRNLFWTSYDTNKKQIN 1711
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
+ A +DGS + +V G L+ +G++ + L+WTD G+N I +D
Sbjct: 1712 V--ARLDGSFKNAVVQG-------LEQPHGLVVHPLHG---KLYWTD-GDN--ISMASLD 1756
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFT 415
GSNRS + S + P GL +D ++Y+ S I+ CN DG+G + +
Sbjct: 1757 GSNRSLLFSGQ-KGPVGLAIDFPENKLYWISSGNHTINRCNLDGSGLEVI---------- 1805
Query: 416 NDLMGDNGVPALALDLENGMLYYSTEGAEFLKT 448
D M A AL + L+++ + +E + T
Sbjct: 1806 -DTMRSQLGKATALAIMGDKLWWADQVSEKMGT 1837
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DG+N ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3066 KLNLDGTNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMNING 3115
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3116 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3173
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3174 ---------ALVVDVQNGYLYWTDWGDHSL 3194
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2407 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 2462
Query: 213 W 213
W
Sbjct: 2463 W 2463
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 17/121 (14%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 744 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETVLLNGTDRKIVYE 803
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIER--------IGMDGSNRSTIISTKI 237
+ G+ S +LFWT++ G R+ER + + S R I ++
Sbjct: 804 GPELNHAFGLCHHGS----YLFWTEYRSGSVYRLERGPPGTTPTVTLLRSERPPIFEIRM 859
Query: 238 Y 238
Y
Sbjct: 860 Y 860
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1304 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1353
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1354 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMR--------- 1404
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1405 ---TTLLAGDIEHPRAIALDPRDGILFWT 1430
>gi|126540379|emb|CAL47125.1| lipophorin receptor [Blattella germanica]
Length = 887
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 140/404 (34%), Positives = 191/404 (47%), Gaps = 88/404 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGP-GCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ + KVCD K DCPN DE C ECK G CS C TP G C C G L
Sbjct: 310 CIPIAKVCDKKPDCPNWEDEPTDKCGKNECKENNGGCSQLCVDTPGGYYCDCRRGFKLM- 368
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D+ TC D+NECE PG CSQ C N KG++ C C EGY+ + +HT CKA+ A+ L+ +
Sbjct: 369 DNRTCDDVNECEVPGTCSQSCINEKGTFKCQCVEGYLRDPRDHTRCKAMEGHAS-LLFAR 427
Query: 123 RHSILVADLEEK--------GKDHRAQDIV----------VSGLDLV------------- 151
RH I L+ K A D V VS L +
Sbjct: 428 RHDIRKISLDHHEMTAIVNDTKSATALDFVFRTGMIFWSDVSDLKIYKAPIDEGTERTVV 487
Query: 152 --------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+GLA DWI HIYW D+ N IE+ + G R +L +D++ +PR + ++P
Sbjct: 488 IKDELTTSDGLAVDWIYNHIYWTDTGKNTIELANFEGNMRKMLIQDSLEEPRAIAVNPID 547
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G W+FWTDWG P+IER GMDGS+RSTI+S ++ WPNGLTLD+ +RVY+ D+KL+
Sbjct: 548 G--WMFWTDWGTEPKIERAGMDGSHRSTIVSYEVKWPNGLTLDLVKKRVYWVDAKLNV-- 603
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
I N DG + ++ LY AL
Sbjct: 604 --------------------------------ISSCNYDGQDRRVI----LYSPDALQHP 627
Query: 324 NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 367
+ + W++WTDW + + +G + I +T +
Sbjct: 628 FSITTFED-----WVYWTDWDKQAVYKANKFNGKDVEPITATHM 666
>gi|2764400|emb|CAA03855.1| lipophorin receptor [Locusta migratoria]
Length = 883
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 140/409 (34%), Positives = 189/409 (46%), Gaps = 98/409 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADE-GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L+ VCD K DCPN DE C EC G CS C TP G C C PG L
Sbjct: 351 CIPLSSVCDKKPDCPNWEDEPQEKCGKNECAVNNGGCSQKCVDTPAGYYCDCLPGYKLV- 409
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D+ TC D+NECE PG CSQ C N KG++ C C EGY+ + + T CKA+ A+ L+ +
Sbjct: 410 DNHTCDDVNECEIPGACSQECINEKGTFKCQCVEGYLRDPRDPTRCKAMEGHAS-LLFAR 468
Query: 123 RHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------- 151
RH I L DH +V + LD V
Sbjct: 469 RHDIRKISL-----DHHEMTAIVNDTKSATALDFVFRTGMIFWSDVSDQKIYKAPIDEGS 523
Query: 152 -------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
+GLA DWI HIYW D+ N IE+ + G R +L KD + +PR +
Sbjct: 524 ERTVVIKDQLTTSDGLAVDWIYNHIYWTDTGKNTIELANFEGNMRKILIKDELEEPRAIA 583
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
++P G W++WTDWG NP+IER GMDG++R TI+S ++ WPNGLTLD+ RRVY+ D+K
Sbjct: 584 VNPLDG--WMYWTDWGTNPKIERAGMDGAHRQTIVSYEVKWPNGLTLDLVKRRVYWVDAK 641
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
L+ I N DGS ++ LY
Sbjct: 642 LNV----------------------------------ISSCNYDGSGRRVI----LYSP- 662
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 367
E+ +S W++WTDW + + +G + S I +T +
Sbjct: 663 ----EHLQHPFSVTTFEDWVYWTDWDKQAVYKANKFNGKDVSAITATHM 707
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 56/109 (51%), Gaps = 13/109 (11%)
Query: 335 TRWLFWTDWGENPRIERIGMD-GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
T +FW+D + +I + +D GS R+ +I ++ +GL +D +Y+ D+ + I+
Sbjct: 501 TGMIFWSDVSDQ-KIYKAPIDEGSERTVVIKDQLTTSDGLAVDWIYNHIYWTDTGKNTIE 559
Query: 394 FCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
N++G R+ ILI +E A+A++ +G +Y++ G
Sbjct: 560 LANFEGNMRK--ILIKDELEEPR---------AIAVNPLDGWMYWTDWG 597
>gi|297262740|ref|XP_001099776.2| PREDICTED: prolow-density lipoprotein receptor-related protein 1
[Macaca mulatta]
Length = 1682
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 201/421 (47%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC +G+DE GC + EC HK CS C +G C C PG L
Sbjct: 457 RCVAEVLLCNGQDDCGDGSDER-GCHINECLSHKLSGCSQDCEDLKIGFKCRCRPGFRLK 515
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 516 DDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 575
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 576 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 635
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 636 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 695
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS+RS I+ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 696 QNG--YLYWTDWGDHSLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDY 753
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 754 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 779
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 780 LFEDYVY-----------WTDW-ETKSINRAHKTTGTNKTLLIST-LHRPMDLHVFHALR 826
Query: 381 R 381
+
Sbjct: 827 Q 827
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 85/148 (57%), Gaps = 10/148 (6%)
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
AA SNRH + ++G H + +SGL + G+A DW+ G++YW DS + IE
Sbjct: 1070 AAPPTTSNRHRRQI----DRGVTH----LNISGLKMPRGIAIDWVAGNVYWTDSGRDVIE 1121
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V G NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++
Sbjct: 1122 VAQMKGENRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQ 1179
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
I WP GL +D R+Y+AD+KL I
Sbjct: 1180 DNIQWPTGLAVDYHNERLYWADAKLSVI 1207
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 163/405 (40%), Gaps = 88/405 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSNT--CHPTPLGALCTCPP 57
RC++ + C+ DC +G+DE C L C +C + C T A C C
Sbjct: 891 RCLSSSLRCNMFDDCGDGSDE-EDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRS 949
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G CQD+NEC + G CSQ+C NTKG ++CSC ++ ++ TCKA
Sbjct: 950 GFHTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHN--TCKAEGSEYQV 1007
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L I++ + I G H A + G + V R++ ++V
Sbjct: 1008 LYIADDNEIRSL---FPGHPHSAYEQAFQGDESV-----------------RIDAMDVHV 1047
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ G ++WT+W + IS +
Sbjct: 1048 KAGR--------------------------VYWTNW---------------HTGTISYRS 1066
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P + R D + ++ L++ + + +YW D G + + +
Sbjct: 1067 L-PPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEV--- 1122
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A M G N L+SG + E A+ +D G +Y W+DWG +P+IE MD
Sbjct: 1123 -AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMD 1170
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
G+ R T++ I WP GL +D R+Y+AD+KL I +GT
Sbjct: 1171 GTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT 1215
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 582 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 631
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 632 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 689
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 690 ---------ALVVDVQNGYLYWTDWGDHSL 710
>gi|354490790|ref|XP_003507539.1| PREDICTED: prolow-density lipoprotein receptor-related protein 1
[Cricetulus griseus]
Length = 4544
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 140/405 (34%), Positives = 193/405 (47%), Gaps = 92/405 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC +G+DE GC + EC K CS C +G C C PG L
Sbjct: 2916 RCVAEALLCNGQDDCGDGSDER-GCHVNECLNRKLSGCSQDCEDLKIGFKCRCRPGFRLK 2974
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ+C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2975 DDGRTCADVDECSTTFPCSQLCVNTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 3034
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 3035 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 3094
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3095 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3154
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS+RS I+ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 3155 QNG--YLYWTDWGDHSLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDY 3212
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3213 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3238
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIST 365
L +Y WTDW E I R G+N++ +IST
Sbjct: 3239 LFEDYVY-----------WTDW-ETKSINRAHKTTGANKTLLIST 3271
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 162/318 (50%), Gaps = 55/318 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV ++++C+G DC +G+DEG C C + C PTP G C C L D
Sbjct: 86 CVPMSRLCNGVQDCMDGSDEGAHCRELRVNCSRMGCQHHCVPTPSGPTCFCNSSFQLQAD 145
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLIIS 121
TC+D +EC G CSQ+CTNT GS+ C C EGY+L+ DN +CKA N L+I+
Sbjct: 146 GKTCKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPVLLIA 205
Query: 122 NRHSIL------------------------------------VADLEEKGK--------- 136
N +IL V D + +
Sbjct: 206 NSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDSASQTQLKCARMPGL 265
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
D +I +S L VE +A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 266 KGFVDEHTINISLS-LHHVEQMAIDWLTGNFYFVDDIDDRIFVCNGNGDTCVTLLDLELY 324
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R V
Sbjct: 325 NPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLV 382
Query: 253 YFADSKLDFIDCKSLEIK 270
Y+AD+ LD+I+ E K
Sbjct: 383 YWADAYLDYIEVVDYEGK 400
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 156/304 (51%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDGK DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1160 CLPPDKLCDGKDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1217
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1218 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1277
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1278 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1337
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1338 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1397
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R TI + WPNGLT+D +R+ + D++
Sbjct: 1398 RDGI--LFWTDWDASLPRIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDAR 1455
Query: 259 LDFI 262
D I
Sbjct: 1456 SDAI 1459
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 169/431 (39%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1855 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1911
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1912 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1971
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG
Sbjct: 1972 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGH 2029
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D+++D I+ LE N
Sbjct: 2030 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQGGKLYWCDARMDKIERIDLETGENREV 2089
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2090 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGFKDNATDSVPLRTGIGVQLKDIKVFN 2149
Query: 298 KANMDGSNASILVSGQ-----LYEA---LALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G LY A +GML C + + + E +
Sbjct: 2150 RDRQKGTNVCAVANGGSQQLCLYRGGGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 2209
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2210 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2268
Query: 396 NYDGTGRQQVI 406
N DG+GR ++
Sbjct: 2269 NDDGSGRTTIV 2279
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 164/405 (40%), Gaps = 88/405 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSNT--CHPTPLGALCTCPP 57
RC++ + C+ DC +G+DE C L C +C + C T A C C
Sbjct: 3753 RCLSSSLRCNMFDDCGDGSDE-EDCSIDPKLTSCATNASICGDEARCMRTEKAAYCACRS 3811
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G CQD+NEC + G CSQ+C NTKGS++CSC ++ ++ TCKA
Sbjct: 3812 GFHTVPGQPGCQDINECLRFGTCSQLCNNTKGSHLCSCARNFMKTHN--TCKAEGSEYQV 3869
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L I++ + I G H A + G + V R++ ++V
Sbjct: 3870 LYIADDNEIRSL---FPGHPHSAYEQTFQGDESV-----------------RIDAMDVHV 3909
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ G ++WT+W + IS +
Sbjct: 3910 KAGR--------------------------VYWTNW---------------HTGTISYRS 3928
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P + R D + ++ L++ + + +YW D G + + +
Sbjct: 3929 L-PPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEV--- 3984
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A M G N L+SG + E A+ +D G +Y W+DWG +P+IE MD
Sbjct: 3985 -AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMD 4032
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
G+ R T++ I WP GL +D R+Y+AD+KL I DGT
Sbjct: 4033 GTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLDGT 4077
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 110/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 486 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 544
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 545 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 604
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + + PR +++DP G W
Sbjct: 605 VEGVAVDWMGNNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMAHPRAIVVDPLNG--W 662
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 663 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 722
Query: 261 FID 263
I+
Sbjct: 723 RIE 725
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 16/137 (11%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 295 FYFVDD----IDDRIFVCNGNGDTCVTLLDLELYNPKGIALDPAMGK---------VFFT 341
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 342 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 401
Query: 402 RQ---QVILIDLMVEFT 415
RQ Q ILI+ + T
Sbjct: 402 RQTIIQGILIEHLYGLT 418
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 132/333 (39%), Gaps = 60/333 (18%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N + C+C L+ DN TC FL+ + + I DL+
Sbjct: 1548 GPCSHLCLINYNRTVSCACPHLMKLK-DNTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1603
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1604 NYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1662
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1663 LAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1709
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I ANMDGSN ++L SGQ
Sbjct: 1710 --------------------HPLRGKLYWTD-GDN-----ISMANMDGSNRTLLFSGQKG 1743
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY W G N I R +DGS I + +
Sbjct: 1744 PVGLAIDFPESKLY-----------WISSG-NHTINRCNLDGSGLEIIDAMRSQLGKATA 1791
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
L I ++++AD + + CN G + V+L
Sbjct: 1792 LAIMGDKLWWADQLSEKMGTCN-KADGSESVVL 1823
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2341 ECQNLMFWTNWNELHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2400
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2401 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2431
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 2260 IHFGNIQQINDDGSGRTTIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGA 2319
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2320 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNELHPSIMRAALSGANVLTLIEKDIR 2377
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2378 TPNGLAIDHRAEKLYFSDATLDKIE 2402
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3041 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 3090
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3091 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3148
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3149 ---------ALVVDVQNGYLYWTDWGDHSL 3169
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2381 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 2436
Query: 213 W 213
W
Sbjct: 2437 W 2437
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1279 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1328
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1329 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1379
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1380 ---TTLLAGDIEHPRAIALDPRDGILFWT 1405
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 680 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 739
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIER--------IGMDGSNRSTIISTKI 237
+ G+ + +LFWT++ G R+ER + + S R I ++
Sbjct: 740 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLERGAAGAPPTVTLLRSERPPIFEIRM 795
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
Y D ++V +++ C SL + T
Sbjct: 796 Y-------DAQQQQVGTNKCRVNNGGCSSLCLAT 822
>gi|338726177|ref|XP_001916726.2| PREDICTED: LOW QUALITY PROTEIN: prolow-density lipoprotein
receptor-related protein 1-like [Equus caballus]
Length = 4487
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 144/421 (34%), Positives = 200/421 (47%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC +G+DE GC + EC K CS C +G C C PG L
Sbjct: 2916 RCVAEALLCNGQDDCGDGSDER-GCHINECLSRKLSGCSQDCEDLKIGFKCRCRPGFRLK 2974
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2975 DDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 3034
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 3035 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 3094
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3095 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3154
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS+RS I+ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 3155 QNG--YLYWTDWGDHSLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDY 3212
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3213 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3238
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 3239 LFEDYVY-----------WTDW-ETKSINRAHKTTGTNKTLLIST-LHRPMDLHVFHALR 3285
Query: 381 R 381
+
Sbjct: 3286 Q 3286
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 167/320 (52%), Gaps = 59/320 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCD--LAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV+++++C+G DC +G+DEGP C C H G C + C PT G C C L
Sbjct: 85 CVHMSRLCNGVQDCVDGSDEGPHCRELRGHCSH-LG-CQHHCVPTLNGPTCYCNNTFQLQ 142
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLI 119
D TC+D +EC G CSQ+CTNT GS+ C C EGY+L+ DN +CKA N A L+
Sbjct: 143 ADGKTCKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPAVLL 202
Query: 120 ISNRHSIL------------------------------------VADLEEKGK------- 136
I+N +IL V D + +
Sbjct: 203 IANSQNILATYLSGTQVSTITPTSTRQTTAMDFSYANETVCWVHVGDSAAQTQLKCARMP 262
Query: 137 ------DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
D +I +S L VE +A DW+ G+ Y++D +RI VC+ NG + L
Sbjct: 263 GLKGFVDEHTINISLS-LHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLE 321
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R
Sbjct: 322 LYNPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSR 379
Query: 251 RVYFADSKLDFIDCKSLEIK 270
VY+AD+ LD+I+ E K
Sbjct: 380 LVYWADAYLDYIEVVDYEGK 399
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 155/304 (50%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1159 CLPPDKLCDGNDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1216
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1217 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1276
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1277 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1336
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1337 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1396
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R TI + WPNGLT+D +R+ + D++
Sbjct: 1397 RDGI--LFWTDWDASLPRIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDAR 1454
Query: 259 LDFI 262
D I
Sbjct: 1455 SDAI 1458
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 170/431 (39%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T GS C C GY L C+ + +FL+ S I L+ K
Sbjct: 1855 GECSQLCLPTSGSTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1911
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1912 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1971
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1972 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2029
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG++R +++ I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 2030 YPRIERSRLDGTDRVVLVNVSISWPNGISVDYQDGKIYWCDARTDKIERIDLETGENREV 2089
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2090 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFN 2149
Query: 298 KANMDGSNASILVSGQ-----LYEA---LALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G LY + +GML C + + + E +
Sbjct: 2150 RDRQKGTNVCAVANGGCQQLCLYRGGGQRSCACAHGMLAEDGASCREYAGYLLYSERTIL 2209
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2210 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2268
Query: 396 NYDGTGRQQVI 406
N DG+GR ++
Sbjct: 2269 NDDGSGRTTIV 2279
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 85/148 (57%), Gaps = 10/148 (6%)
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
AA SNRH + ++G H + +SGL + G+A DW+ G++YW DS + IE
Sbjct: 3875 AAPPTTSNRHRRQI----DRGVTH----LNISGLKMPRGIAIDWVAGNVYWTDSGRDVIE 3926
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V G NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++
Sbjct: 3927 VAQMKGENRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQ 3984
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
I WP GL +D R+Y+AD+KL I
Sbjct: 3985 DNIQWPTGLAVDYHNERLYWADAKLSVI 4012
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 485 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 543
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 544 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 603
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 604 VEGVAVDWMGNNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 661
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+E+ MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 662 MYWTDWEEDPKDSRRGRLEKAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 721
Query: 261 FID 263
I+
Sbjct: 722 RIE 724
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 16/137 (11%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 294 FYFVDD----IDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAMGK---------VFFT 340
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 341 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 400
Query: 402 RQ---QVILIDLMVEFT 415
RQ Q ILI+ + T
Sbjct: 401 RQTIIQGILIEHLYGLT 417
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 106/472 (22%), Positives = 173/472 (36%), Gaps = 112/472 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG---PGCDLAECKHKFGLCSNTCHPTPLGALC------- 53
RC+ CDG DC +G+DE P CD+ + + K G C PL C
Sbjct: 3586 RCIAGRWKCDGDHDCADGSDEKDCTPRCDMDQFQCKSGHC------IPLRWRCDADADCM 3639
Query: 54 -------------TCPPGEILSNDSV------TCQDMNEC-----EQPGYCSQMCTNTKG 89
TCP E N+++ C ++C E P C++
Sbjct: 3640 DGSDEEACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCGDNSDENPEECAR------- 3692
Query: 90 SYICSCNEGYVLEYDN------HTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDI 143
++C N + + D C ++ + SI + ++ A
Sbjct: 3693 -FVCPPNRPFRCKNDRVCLXIGRQCDGTDNYPKLTSCATNVSICGDEARCVRTENAAYCA 3751
Query: 144 VVSGLDLVEG------------------LAYDWIGGHIYWLDSRLNRIE-VCDENGTNRI 184
SG V G L + G H+ + C G+
Sbjct: 3752 CRSGFHTVPGQPGCQDINECLRFGTCSQLCNNTKGSHLCSCARNFMKTHNTCKAEGSEYQ 3811
Query: 185 VLAKDNITQPRGMMLD-PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
VL + + R + P F D E+ RI+ + + + + ++YW N
Sbjct: 3812 VLYIADDNEIRSLFPSHPHSAYEQAFQGD--ESVRIDAMDVH------VKAGRVYWTNWH 3863
Query: 244 TLDIATRRVYFA-------------DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN 290
T I+ R + A D + ++ L++ + + +YW D G +
Sbjct: 3864 TGTISYRSLPPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRD 3923
Query: 291 GVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ + A M G N L+SG + E A+ +D G +Y W+DWG +P+
Sbjct: 3924 VIEV----AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPK 3968
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
IE MDG+ R T++ I WP GL +D R+Y+AD+KL I +GT
Sbjct: 3969 IETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT 4020
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 131/333 (39%), Gaps = 59/333 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N + C+C L DN TC FL+ + + I DL+
Sbjct: 1547 GPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1603
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1604 NYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1662
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1663 LAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1709
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I ANMDGSN ++L SGQ
Sbjct: 1710 --------------------HPLRGKLYWTD-GDN-----ISMANMDGSNRTLLFSGQKG 1743
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY W G N I R +DGS I + +
Sbjct: 1744 PVGLAIDFPESKLY-----------WISSG-NHTINRCNLDGSGLEIIDAMQSQLGKATA 1791
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
L I ++++AD + + CN G + V+L
Sbjct: 1792 LAIMGDKLWWADQVSEKMGTCN-KADGSESVVL 1823
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2341 ECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2400
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2401 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2431
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 11/146 (7%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD---SRLNRIEVCDENGT- 181
I ++++ D + +V + VEGLAY +YW S + R V D+N
Sbjct: 2260 IHFGNIQQINDDGSGRTTIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTV-DQNRPG 2318
Query: 182 ---NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKI 237
V+ PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2319 AFERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDI 2376
Query: 238 YWPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2377 RTPNGLAIDHRAEKLYFSDATLDKIE 2402
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3041 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 3090
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3091 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3148
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3149 ---------ALVVDVQNGYLYWTDWGDHSL 3169
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2381 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 2436
Query: 213 W 213
W
Sbjct: 2437 W 2437
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1278 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1327
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1328 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1378
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1379 ---TTLLAGDIEHPRAIALDPRDGILFWT 1404
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 24/154 (15%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE+ D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 679 LEKAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 738
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIER--------IGMDGSNRSTIISTKI 237
+ G+ + +LFWT++ G R+ER + + S R I ++
Sbjct: 739 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLERGTAGAPPTVTLLRSERPPIFEIRM 794
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
Y D ++V +++ C SL + T
Sbjct: 795 Y-------DAQQQQVGTNKCRVNNGGCNSLCLAT 821
>gi|49942|emb|CAA47817.1| AM2 receptor [Mus musculus]
Length = 4545
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 200/421 (47%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC +G+DE GC + EC K CS C +G C C PG L
Sbjct: 2917 RCVAEALLCNGQDDCGDGSDER-GCHVNECLSRKLSGCSQDCEDLKIGFKCRCRPGFRLK 2975
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ+C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2976 DDGRTCADLDECSTTFPCSQLCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 3035
Query: 122 NRHSILVADLEEK---------------GKDHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 3036 NRYYLRKLNLDGSNYTLLKQGLNNAVALAFDYREQMIYWTGVTTQGSMIRRMHLNGSNVQ 3095
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3096 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3155
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS RS I+ TKI WPNGLT+D T R+Y+AD++ D+
Sbjct: 3156 QNG--YLYWTDWGDHSLIGRIGMDGSGRSIIVDTKITWPNGLTVDYVTERIYWADAREDY 3213
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3214 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3239
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 3240 LFEDYVY-----------WTDW-ETKSINRAHKTTGANKTLLIST-LHRPMDLHVFHALR 3286
Query: 381 R 381
+
Sbjct: 3287 Q 3287
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 162/318 (50%), Gaps = 55/318 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV ++++C+G DC +G+DEG C C + C PTP G C C L D
Sbjct: 86 CVPMSRLCNGIQDCMDGSDEGAHCRELRANCSRMGCQHHCVPTPSGPTCYCNSSFQLEAD 145
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLIIS 121
TC+D +EC G CSQ+CTNT GS+ C C EGY+L+ DN +CKA N L+I+
Sbjct: 146 GKTCKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPVLLIA 205
Query: 122 NRHSIL------------------------------------VADLEEKGK--------- 136
N +IL V D + +
Sbjct: 206 NSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDSAAQTQLKCARMPGL 265
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
D +I +S L VE +A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 266 KGFVDEHTINISLS-LHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELY 324
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R V
Sbjct: 325 NPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLV 382
Query: 253 YFADSKLDFIDCKSLEIK 270
Y+AD+ LD+I+ E K
Sbjct: 383 YWADAYLDYIEVVDYEGK 400
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 155/304 (50%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDGK DC +G+DEG CD +C G CS+ C P G +C+CP G L +
Sbjct: 1160 CLPPDKLCDGKDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGS 1217
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D TC++++ F+I SNR
Sbjct: 1218 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGETCRSLDPFKLFIIFSNR 1277
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1278 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDAVEDKIYRGKLLDNGALTSFE 1337
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1338 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1397
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R TI + NGLT+D +R+ + D++
Sbjct: 1398 RDGI--LFWTDWDASLPRIEAASMSGAGRRTIHRETGSGGCANGLTVDYLEKRILWIDAR 1455
Query: 259 LDFI 262
D I
Sbjct: 1456 SDAI 1459
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 128/475 (26%), Positives = 195/475 (41%), Gaps = 120/475 (25%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSN---------------TCH---- 45
C+ VCD DC +G+DE P C+ C C+N CH
Sbjct: 2831 CIPKHFVCDHDRDCADGSDESPECEYPTCGPNEFRCANGRCLSSRQWECDGENDCHDHSD 2890
Query: 46 PTPLGALCTCPPGE------------------ILSNDSVTCQD--------MNEC--EQP 77
P CT P + +L N C D +NEC +
Sbjct: 2891 EAPKNPHCTSPEHKCNASSQFLCSSGRCVAEALLCNGQDDCGDGSDERGCHVNECLSRKL 2950
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS----NRHS----ILVA 129
CSQ C + K + C C G+ L+ D TC ++ + S N H + V
Sbjct: 2951 SGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADLDECSTTFPCSQLCINTHGSYKCLCVE 3010
Query: 130 DLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+G D + V + I + Y+L +LN +G+N +L K
Sbjct: 3011 GYAPRGGDPHSCKAVTDEEPFL-------IFANRYYL-RKLNL------DGSNYTLL-KQ 3055
Query: 190 NITQPRGMMLDPSPGTRWLFWTD-WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248
+ + D + ++WT + I R+ ++GSN + T + P+GL +D
Sbjct: 3056 GLNNAVALAFDYR--EQMIYWTGVTTQGSMIRRMHLNGSNVQVLHRTGLSNPDGLAVDW- 3112
Query: 249 TRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
+ LYW D+G + + + + ++G+ ++
Sbjct: 3113 -----------------------------VGGNLYWCDKGRDTIEV----SKLNGAYRTV 3139
Query: 309 LVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 366
LVS L E AL +D++NG LY WTDWG++ I RIGMDGS RS I+ TK
Sbjct: 3140 LVSSGLREPRALVVDVQNGYLY-----------WTDWGDHSLIGRIGMDGSGRSIIVDTK 3188
Query: 367 IYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
I WPNGLT+D T R+Y+AD++ D+I+F + DG+ R V+ D+ F L D
Sbjct: 3189 ITWPNGLTVDYVTERIYWADAREDYIEFASLDGSNRHVVLSQDIPHIFALTLFED 3243
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 169/431 (39%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1856 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1912
Query: 137 ----------------DHRAQ-------------------------DIVVSGLDLVEGLA 155
D A+ D+V +G+ VEG+A
Sbjct: 1913 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1972
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG
Sbjct: 1973 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGH 2030
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D+++D I+ LE N
Sbjct: 2031 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQGGKLYWCDARMDKIERIDLETGENREV 2090
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2091 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGCKDNATDSVPLRTGIGVQLKDIKVFN 2150
Query: 298 KANMDGSNASILVSGQ-----LYEA---LALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G LY A +GML C + + + E +
Sbjct: 2151 RDRQKGTNVCAVANGGCQQLCLYRGGGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 2210
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2211 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2269
Query: 396 NYDGTGRQQVI 406
N DG+GR ++
Sbjct: 2270 NDDGSGRTTIV 2280
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 85/148 (57%), Gaps = 10/148 (6%)
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
AA SNRH + ++G H + +SGL + G+A DW+ G++YW DS + IE
Sbjct: 3933 AAPPTTSNRHRRQI----DRGVTH----LNISGLKMPRGIAIDWVAGNVYWTDSGRDVIE 3984
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V G NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++
Sbjct: 3985 VAQMKGENRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQ 4042
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
I WP GL +D R+Y+AD+KL I
Sbjct: 4043 DNIQWPTGLAVDYHNERLYWADAKLSVI 4070
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 160/405 (39%), Gaps = 88/405 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSNT--CHPTPLGALCTCPP 57
RC++ + C+ DC +G+DE C L C +C + C T A C C
Sbjct: 3754 RCLSSSLRCNMFDDCGDGSDE-EDCSIDPKLTSCATNASMCGDEARCVRTEKAAYCACRS 3812
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G CQD+NEC + G CSQ+ KG ++CSC ++ ++ TCKA
Sbjct: 3813 GFHTVPGQPGCQDINECLRFGTCSQLWNKPKGGHLCSCARNFMKTHN--TCKAEGSEYQV 3870
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L I++ + I G H A + G + V R++ ++V
Sbjct: 3871 LYIADDNEIRSL---FPGHPHSAYEQTFQGDESV-----------------RIDAMDVHV 3910
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ G ++WT+W + IS +
Sbjct: 3911 KAGR--------------------------VYWTNW---------------HTGTISYRS 3929
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P + R D + ++ L++ + + +YW D G + + +
Sbjct: 3930 L-PPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEV--- 3985
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A M G N L+SG + E A+ +D G +Y W+DWG +P+IE MD
Sbjct: 3986 -AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMD 4033
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
G+ R T++ I WP GL +D R+Y+AD+KL I +GT
Sbjct: 4034 GTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT 4078
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 486 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 544
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 545 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 604
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 605 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 662
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 663 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 722
Query: 261 FID 263
I+
Sbjct: 723 RIE 725
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 16/137 (11%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 295 FYFVDD----IDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAMGK---------VFFT 341
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 342 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 401
Query: 402 RQ---QVILIDLMVEFT 415
RQ Q ILI+ + T
Sbjct: 402 RQTIIQGILIEHLYGLT 418
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 129/328 (39%), Gaps = 59/328 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N + +C L DN TC FL+ + + I DL+
Sbjct: 1548 GPCSHLCLINYNRTVSWACPHLMKLHKDNTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1604
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1605 NYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1663
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1664 LAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1710
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I ANMDGSN ++L SGQ
Sbjct: 1711 --------------------HPLRGKLYWTD-GDN-----ISMANMDGSNHTLLFSGQKG 1744
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY W G N I R +DGS I + +
Sbjct: 1745 PVGLAIDFPESKLY-----------WISSG-NHTINRCNLDGSELEVIDTMRSQLGKATA 1792
Query: 375 LDIATRRVYFADSKLDFIDFCN-YDGTG 401
L I ++++AD + + CN DG+G
Sbjct: 1793 LAIMGDKLWWADQVSEKMGTCNKADGSG 1820
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2342 ECQNLMFWTNWNELHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2401
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2402 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2432
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 2261 IHFGNIQQINDDGSGRTTIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGA 2320
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2321 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNELHPSIMRAALSGANVLTLIEKDIR 2378
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2379 TPNGLAIDHRAEKLYFSDATLDKIE 2403
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG 356
K N+DGSN ++L G ALA D M+Y++ + + I R+ ++G
Sbjct: 3042 KLNLDGSNYTLLKQGLNNAVALAFDYREQMIYWTGVT----------TQGSMIRRMHLNG 3091
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3092 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3149
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3150 ---------ALVVDVQNGYLYWTDWGDHSL 3170
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 21/176 (11%)
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
++YW + T A +R + + ++ + L + + R L+W N +
Sbjct: 1629 RVYWSDVRTQ--AIKRAFINGTGVETVVSADLPNAHGLAVDWVSRNLFWTSYDTNKKQIN 1686
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
+ A +DGS + +V G L+ +G++ + L+WTD G+N I MD
Sbjct: 1687 V--ARLDGSFKNAVVQG-------LEQPHGLVVHPLRG---KLYWTD-GDN--ISMANMD 1731
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
GSN + + S + P GL +D ++Y+ S I+ CN DG+ ++ +ID M
Sbjct: 1732 GSNHTLLFSGQ-KGPVGLAIDFPESKLYWISSGNHTINRCNLDGS---ELEVIDTM 1783
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2382 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 2437
Query: 213 W 213
W
Sbjct: 2438 W 2438
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1279 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDAVEDKIYRGKLL 1328
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1329 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1379
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1380 ---TTLLAGDIEHPRAIALDPRDGILFWT 1405
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 17/121 (14%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 680 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 739
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIER--------IGMDGSNRSTIISTKI 237
+ G+ + +LFWT++ G R+ER + + S R I ++
Sbjct: 740 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLERGVAGAPPTVTLLRSERPPIFEIRM 795
Query: 238 Y 238
Y
Sbjct: 796 Y 796
>gi|410964879|ref|XP_003988980.1| PREDICTED: prolow-density lipoprotein receptor-related protein 1
[Felis catus]
Length = 4544
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 144/421 (34%), Positives = 199/421 (47%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC +G+DE GC + EC K CS C +G C C PG L
Sbjct: 2916 RCVAEALLCNGQDDCGDGSDER-GCHVNECLSRKLSGCSQDCEDLKIGFKCRCRPGFRLK 2974
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2975 DDGRTCADVDECSSTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 3034
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 3035 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 3094
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3095 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3154
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS RS I+ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 3155 QNG--YLYWTDWGDHSLIGRIGMDGSGRSVIVDTKITWPNGLTLDYVTERIYWADAREDY 3212
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3213 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3238
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 3239 LFEDYVY-----------WTDW-ETKSINRAHKTTGTNKTLLIST-LHRPMDLHVFHALR 3285
Query: 381 R 381
+
Sbjct: 3286 Q 3286
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 164/318 (51%), Gaps = 55/318 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ ++++C+G DC +G+DEGP C + + C + C PT G C C L D
Sbjct: 85 CILMSRLCNGVQDCVDGSDEGPHCRELQGQCSQLGCQHHCVPTLNGPTCYCNNSFQLQAD 144
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLIIS 121
TC+D +EC G CSQ+CTNT GS+ C C EGY+L+ DN +CKA N L+I+
Sbjct: 145 GKTCKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPVLLIA 204
Query: 122 NRHSIL------------------------------------VADLEEKGK--------- 136
N +IL V D + +
Sbjct: 205 NSQNILATYLSGAQVSTITPTSTRQTTAMDFSYTNETVCWVHVGDSAAQTQLKCARMPGL 264
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
D +I +S L VE +A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 265 KGFVDEHTINISLS-LHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELY 323
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R V
Sbjct: 324 NPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLV 381
Query: 253 YFADSKLDFIDCKSLEIK 270
Y+AD+ LD+I+ E K
Sbjct: 382 YWADAYLDYIEVVDYEGK 399
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 155/304 (50%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1159 CLPPDKLCDGNDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1216
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1217 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1276
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1277 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1336
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1337 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1396
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R TI + WPNGLT+D +R+ + D++
Sbjct: 1397 RDGI--LFWTDWDASLPRIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDAR 1454
Query: 259 LDFI 262
D I
Sbjct: 1455 SDAI 1458
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 168/431 (38%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1855 GDCSQLCLPTSESTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1911
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1912 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1971
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1972 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2029
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 2030 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGENREV 2089
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2090 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFN 2149
Query: 298 KANMDGSNASILVSGQLYE--------ALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G + A +GML C + + + E +
Sbjct: 2150 RDRQKGTNVCAVANGGCQQLCLYRGGGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 2209
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2210 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQRI 2268
Query: 396 NYDGTGRQQVI 406
N DG+GR ++
Sbjct: 2269 NDDGSGRITIV 2279
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 125/268 (46%), Gaps = 49/268 (18%)
Query: 26 PGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMC 84
PGC D+ EC +FG CS C+ T G LC+C + ++ N C+ G Q+
Sbjct: 3820 PGCQDINECL-RFGTCSQLCNNTKGGHLCSCARNFMKTH--------NTCKAEGSEYQV- 3869
Query: 85 TNTKGSYICSCNEGYVLEYDNHTCKA-----------------INHSAAFLIISNRH--- 124
YI NE L + +H A ++ A + +N H
Sbjct: 3870 -----LYIADDNEIRSL-FPSHPHSAYEQAFQGDESVRIDAMDVHVKAGRVYWTNWHTGT 3923
Query: 125 ----SILVADLEEKGKDHRAQ------DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
S+ A HR Q + +SGL + G+A DW+ G++YW DS + IE
Sbjct: 3924 ISYRSLPPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAVDWVAGNVYWTDSGRDVIE 3983
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V G NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++
Sbjct: 3984 VAQMKGENRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQ 4041
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
I WP GL +D R+Y+AD+KL I
Sbjct: 4042 DNIQWPTGLAVDYHNERLYWADAKLSVI 4069
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 485 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 543
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 544 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 603
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 604 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 661
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 662 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 721
Query: 261 FID 263
I+
Sbjct: 722 RIE 724
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 16/137 (11%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 294 FYFVDD----IDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAMGK---------VFFT 340
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 341 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 400
Query: 402 RQ---QVILIDLMVEFT 415
RQ Q ILI+ + T
Sbjct: 401 RQTIIQGILIEHLYGLT 417
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 30/184 (16%)
Query: 232 IISTKIYWPNGLTLDIATRRVYFA-------------DSKLDFIDCKSLEIKTNVNYSTI 278
+ + ++YW N T I+ R + A D + ++ L++ + +
Sbjct: 3909 VKAGRVYWTNWHTGTISYRSLPPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAVDWV 3968
Query: 279 FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTR 336
+YW D G + + + A M G N L+SG + E A+ +D G +Y
Sbjct: 3969 AGNVYWTDSGRDVIEV----AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-------- 4016
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
W+DWG +P+IE MDG+ R T++ I WP GL +D R+Y+AD+KL I
Sbjct: 4017 ---WSDWGNHPKIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIR 4073
Query: 397 YDGT 400
+GT
Sbjct: 4074 LNGT 4077
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 131/333 (39%), Gaps = 59/333 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N + C+C L DN TC FL+ + + I DL+
Sbjct: 1547 GPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1603
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1604 NYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1662
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1663 LAVDWV--SRNLFWTSYDSNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1709
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I ANMDGSN ++L SGQ
Sbjct: 1710 --------------------HPLRGKLYWTD-GDN-----ISMANMDGSNRTLLFSGQKG 1743
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY W G N I R +DGS I + +
Sbjct: 1744 PVGLAIDFPESKLY-----------WISSG-NHTISRCNLDGSGLEVIDAMRSQLGKATA 1791
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
L I ++++AD + + CN G + V+L
Sbjct: 1792 LAIMGDKLWWADQVSEKMGTCN-KADGSESVVL 1823
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2341 ECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2400
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2401 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2431
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I +++ D + +V + VEGLAY +YW + I + T
Sbjct: 2260 IHFGNIQRINDDGSGRITIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGA 2319
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2320 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIR 2377
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2378 TPNGLAIDHRAEKLYFSDATLDKIE 2402
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3041 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 3090
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3091 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3148
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3149 ---------ALVVDVQNGYLYWTDWGDHSL 3169
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2381 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 2436
Query: 213 W 213
W
Sbjct: 2437 W 2437
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1278 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1327
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1328 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1378
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1379 ---TTLLAGDIEHPRAIALDPRDGILFWT 1404
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 679 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 738
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIER--------IGMDGSNRSTIISTKI 237
+ G+ + +LFWT++ G R+ER + + S R I ++
Sbjct: 739 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLERGTGGAPPTVTLLRSERPPIFEIRM 794
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
Y D ++V +++ C SL + T
Sbjct: 795 Y-------DAQQQQVGTNKCRVNNGGCSSLCLAT 821
>gi|283837871|ref|NP_001123962.1| prolow-density lipoprotein receptor-related protein 1 precursor
[Rattus norvegicus]
gi|149066587|gb|EDM16460.1| rCG59548 [Rattus norvegicus]
Length = 4545
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 200/421 (47%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC +G+DE GC + EC K CS C +G C C PG L
Sbjct: 2917 RCVAEALLCNGQDDCGDGSDER-GCHVNECLSRKLSGCSQDCEDLKIGFKCRCRPGFRLK 2975
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ+C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2976 DDGRTCADVDECSTTFPCSQLCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 3035
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 3036 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYRGQMIYWTDVTTQGSMIRRMHLNGSNVQ 3095
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3096 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3155
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS RS I+ TKI WPNGLT+D T R+Y+AD++ D+
Sbjct: 3156 QNG--YLYWTDWGDHSLIGRIGMDGSGRSIIVDTKITWPNGLTVDYVTERIYWADAREDY 3213
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3214 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3239
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 3240 LFEDYVY-----------WTDW-ETKSINRAHKTTGANKTLLIST-LHRPMDLHVFHALR 3286
Query: 381 R 381
+
Sbjct: 3287 Q 3287
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 162/318 (50%), Gaps = 55/318 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV ++++C+G DC +G+DEG C C + C PTP G C C L D
Sbjct: 86 CVPMSRLCNGIQDCMDGSDEGAHCRELRVNCSRMGCQHHCVPTPSGPTCYCNNSFQLQAD 145
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLIIS 121
TC+D +EC G CSQ+CTNT GS+ C C EGY+L+ DN +CKA N L+I+
Sbjct: 146 GKTCKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPVLLIA 205
Query: 122 NRHSIL------------------------------------VADLEEKGK--------- 136
N +IL V D + +
Sbjct: 206 NSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDSAAQTQLKCARMPSL 265
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
D +I +S L VE +A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 266 KGFVDEHTINISLS-LHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELY 324
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R V
Sbjct: 325 NPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLV 382
Query: 253 YFADSKLDFIDCKSLEIK 270
Y+AD+ LD+I+ E K
Sbjct: 383 YWADAYLDYIEVVDYEGK 400
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 157/304 (51%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C++ K+CDGK DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1160 CLSPDKLCDGKDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1217
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1218 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1277
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1278 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1337
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1338 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1397
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R TI + WPNGLT+D +R+ + D++
Sbjct: 1398 RDGI--LFWTDWDASLPRIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDAR 1455
Query: 259 LDFI 262
D I
Sbjct: 1456 SDAI 1459
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 169/431 (39%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1856 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1912
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1913 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1972
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG
Sbjct: 1973 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGH 2030
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D+++D I+ LE N
Sbjct: 2031 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQGGKLYWCDARMDKIERIDLETGENREV 2090
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2091 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGCKDNATDSVPLRTGIGVQLKDIKVFN 2150
Query: 298 KANMDGSNASILVSGQ-----LYEA---LALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G LY A +GML C + + + E +
Sbjct: 2151 RDRQKGTNVCAVANGGCQQLCLYRGGGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 2210
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2211 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2269
Query: 396 NYDGTGRQQVI 406
N DG+GR ++
Sbjct: 2270 NDDGSGRTTIV 2280
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 174/430 (40%), Gaps = 94/430 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSNT--CHPTPLGALCTCPP 57
RC++ + C+ DC +G+DE C L C +C + C T A C C P
Sbjct: 3754 RCLSSSLRCNMFDDCGDGSDE-EDCSIDPKLTSCATNASMCGDEARCVRTEKAAYCACRP 3812
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G CQD+NEC + G CSQ+C NTKG ++CSC ++ ++ TCKA
Sbjct: 3813 GFHTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHN--TCKAEGSEYQV 3870
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L I++ + I G H A + G + V R++ ++V
Sbjct: 3871 LYIADDNEIRSL---FPGHPHSAYEQAFQGDESV-----------------RIDAMDVHV 3910
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ G ++WT+W + IS +
Sbjct: 3911 KAGR--------------------------VYWTNW---------------HTGTISYRS 3929
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P + R D + ++ L++ + + +YW D G + + +
Sbjct: 3930 L-PPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEV--- 3985
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A M G N L+SG + E A+ +D G +Y W+DWG +P+IE MD
Sbjct: 3986 -AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMD 4033
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID----LM 411
G+ R T++ I WP GL +D R+Y+AD+KL I +GT ++ +D L
Sbjct: 4034 GTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT--DPIVAVDSKRGLS 4091
Query: 412 VEFTNDLMGD 421
F+ D+ D
Sbjct: 4092 HPFSIDVFED 4101
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 486 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 544
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 545 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 604
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 605 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 662
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 663 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 722
Query: 261 FID 263
I+
Sbjct: 723 RIE 725
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 16/137 (11%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 295 FYFVDD----IDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAMGK---------VFFT 341
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 342 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 401
Query: 402 RQ---QVILIDLMVEFT 415
RQ Q ILI+ + T
Sbjct: 402 RQTIIQGILIEHLYGLT 418
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 129/328 (39%), Gaps = 59/328 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N + C+C L DN TC FL+ + + I DL+
Sbjct: 1548 GPCSHLCLINYNRTVSCACPHLMKLHNDNTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1604
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1605 NYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1663
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1664 LAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1710
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I NMDGSN ++L SGQ
Sbjct: 1711 --------------------HPLRGKLYWTD-GDN-----ISMVNMDGSNRTLLFSGQKG 1744
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY W G N I R +DGS I + +
Sbjct: 1745 PVGLAIDFPESKLY-----------WISSG-NHTINRCNLDGSELEVIDTMRSQLGKATA 1792
Query: 375 LDIATRRVYFADSKLDFIDFCN-YDGTG 401
L I ++++AD + + CN DG+G
Sbjct: 1793 LAIMGDKLWWADQVSEKMGTCNKADGSG 1820
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2342 ECQNLMFWTNWNELHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2401
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2402 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2432
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 2261 IHFGNIQQINDDGSGRTTIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGA 2320
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2321 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNELHPSIMRAALSGANVLTLIEKDIR 2378
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2379 TPNGLAIDHRAEKLYFSDATLDKIE 2403
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
++YW + T A +R + + ++ + L + + R L+W N +
Sbjct: 1629 RVYWSDVRTQ--AIKRAFINGTGVETVVSADLPNAHGLAVDWVSRNLFWTSYDTNKKQIN 1686
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
+ A +DGS + +V G L+ +G++ + L+WTD G+N I + MD
Sbjct: 1687 V--ARLDGSFKNAVVQG-------LEQPHGLVVHPLRG---KLYWTD-GDN--ISMVNMD 1731
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
GSNR+ + S + P GL +D ++Y+ S I+ CN DG+ ++ +ID M
Sbjct: 1732 GSNRTLLFSGQ-KGPVGLAIDFPESKLYWISSGNHTINRCNLDGS---ELEVIDTM 1783
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3042 KLNLDGSNYTLLKQG-LNNAVALDFD----YRGQM-----IYWTDVTTQGSMIRRMHLNG 3091
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3092 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3149
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3150 ---------ALVVDVQNGYLYWTDWGDHSL 3170
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2382 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 2437
Query: 213 W 213
W
Sbjct: 2438 W 2438
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1279 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1328
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1329 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1379
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1380 ---TTLLAGDIEHPRAIALDPRDGILFWT 1405
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 680 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 739
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIER--------IGMDGSNRSTIISTKI 237
+ G+ + +LFWT++ G R+ER + + S R I ++
Sbjct: 740 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLERGVAGAQPTVTLLRSERPPIFEIRM 795
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
Y D ++V +++ C SL + T
Sbjct: 796 Y-------DAQQQQVGTNKCRVNNGGCSSLCLAT 822
>gi|124494256|ref|NP_032538.2| prolow-density lipoprotein receptor-related protein 1 precursor [Mus
musculus]
gi|15825096|gb|AAL09567.1| lipoprotein receptor-related protein [Mus musculus]
gi|148692566|gb|EDL24513.1| low density lipoprotein receptor-related protein 1 [Mus musculus]
Length = 4545
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 200/421 (47%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC +G+DE GC + EC K CS C +G C C PG L
Sbjct: 2917 RCVAEALLCNGQDDCGDGSDER-GCHVNECLSRKLSGCSQDCEDLKIGFKCRCRPGFRLK 2975
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ+C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2976 DDGRTCADLDECSTTFPCSQLCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 3035
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 3036 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 3095
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3096 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3155
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS RS I+ TKI WPNGLT+D T R+Y+AD++ D+
Sbjct: 3156 QNG--YLYWTDWGDHSLIGRIGMDGSGRSIIVDTKITWPNGLTVDYVTERIYWADAREDY 3213
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3214 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3239
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 3240 LFEDYVY-----------WTDW-ETKSINRAHKTTGANKTLLIST-LHRPMDLHVFHALR 3286
Query: 381 R 381
+
Sbjct: 3287 Q 3287
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 162/318 (50%), Gaps = 55/318 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV ++++C+G DC +G+DEG C C + C PTP G C C L D
Sbjct: 86 CVPMSRLCNGIQDCMDGSDEGAHCRELRANCSRMGCQHHCVPTPSGPTCYCNSSFQLQAD 145
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLIIS 121
TC+D +EC G CSQ+CTNT GS+ C C EGY+L+ DN +CKA N L+I+
Sbjct: 146 GKTCKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPVLLIA 205
Query: 122 NRHSIL------------------------------------VADLEEKGK--------- 136
N +IL V D + +
Sbjct: 206 NSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDSAAQTQLKCARMPGL 265
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
D +I +S L VE +A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 266 KGFVDEHTINISLS-LHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELY 324
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R V
Sbjct: 325 NPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLV 382
Query: 253 YFADSKLDFIDCKSLEIK 270
Y+AD+ LD+I+ E K
Sbjct: 383 YWADAYLDYIEVVDYEGK 400
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 157/304 (51%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDGK DC +G+DEG CD +C G CS+ C P G +C+CP G L +
Sbjct: 1160 CLPPDKLCDGKDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGS 1217
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1218 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1277
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1278 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1337
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1338 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1397
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R TI + WPNGLT+D +R+ + D++
Sbjct: 1398 RDGI--LFWTDWDASLPRIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDAR 1455
Query: 259 LDFI 262
D I
Sbjct: 1456 SDAI 1459
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 169/431 (39%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1856 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1912
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1913 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1972
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG
Sbjct: 1973 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGH 2030
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D+++D I+ LE N
Sbjct: 2031 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQGGKLYWCDARMDKIERIDLETGENREV 2090
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2091 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGCKDNATDSVPLRTGIGVQLKDIKVFN 2150
Query: 298 KANMDGSNASILVSGQ-----LYEA---LALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G LY A +GML C + + + E +
Sbjct: 2151 RDRQKGTNVCAVANGGCQQLCLYRGGGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 2210
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2211 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2269
Query: 396 NYDGTGRQQVI 406
N DG+GR ++
Sbjct: 2270 NDDGSGRTTIV 2280
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 127/261 (48%), Gaps = 35/261 (13%)
Query: 26 PGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ----------DMNEC 74
PGC D+ EC +FG CS C+ T G LC+C + ++++ + D NE
Sbjct: 3821 PGCQDINECL-RFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIADDNEI 3879
Query: 75 EQ--PGYCSQMCTNT-KG-------SYICSCNEGYVLEYDNHTCKAINHS---AAFLIIS 121
PG+ T +G + G V + HT S AA S
Sbjct: 3880 RSLFPGHPHSAYEQTFQGDESVRIDAMDVHVKAGRVYWTNWHTGTISYRSLPPAAPPTTS 3939
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
NRH + ++G H + +SGL + G+A DW+ G++YW DS + IEV G
Sbjct: 3940 NRHRRQI----DRGVTH----LNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEVAQMKGE 3991
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++ I WP
Sbjct: 3992 NRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQDNIQWPT 4049
Query: 242 GLTLDIATRRVYFADSKLDFI 262
GL +D R+Y+AD+KL I
Sbjct: 4050 GLAVDYHNERLYWADAKLSVI 4070
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 163/405 (40%), Gaps = 88/405 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSNT--CHPTPLGALCTCPP 57
RC++ + C+ DC +G+DE C L C +C + C T A C C
Sbjct: 3754 RCLSSSLRCNMFDDCGDGSDE-EDCSIDPKLTSCATNASMCGDEARCVRTEKAAYCACRS 3812
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G CQD+NEC + G CSQ+C NTKG ++CSC ++ ++ TCKA
Sbjct: 3813 GFHTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHN--TCKAEGSEYQV 3870
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L I++ + I G H A + G + V R++ ++V
Sbjct: 3871 LYIADDNEIRSL---FPGHPHSAYEQTFQGDESV-----------------RIDAMDVHV 3910
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ G ++WT+W + IS +
Sbjct: 3911 KAGR--------------------------VYWTNW---------------HTGTISYRS 3929
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P + R D + ++ L++ + + +YW D G + + +
Sbjct: 3930 L-PPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEV--- 3985
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A M G N L+SG + E A+ +D G +Y W+DWG +P+IE MD
Sbjct: 3986 -AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMD 4033
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
G+ R T++ I WP GL +D R+Y+AD+KL I +GT
Sbjct: 4034 GTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT 4078
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 486 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 544
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 545 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 604
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 605 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 662
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 663 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 722
Query: 261 FID 263
I+
Sbjct: 723 RIE 725
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 16/137 (11%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 295 FYFVDD----IDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAMGK---------VFFT 341
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 342 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 401
Query: 402 RQ---QVILIDLMVEFT 415
RQ Q ILI+ + T
Sbjct: 402 RQTIIQGILIEHLYGLT 418
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 130/328 (39%), Gaps = 59/328 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N + C+C L DN TC FL+ + + I DL+
Sbjct: 1548 GPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1604
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1605 NYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1663
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1664 LAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1710
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I ANMDGSN ++L SGQ
Sbjct: 1711 --------------------HPLRGKLYWTD-GDN-----ISMANMDGSNHTLLFSGQKG 1744
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY W G N I R +DGS I + +
Sbjct: 1745 PVGLAIDFPESKLY-----------WISSG-NHTINRCNLDGSELEVIDTMRSQLGKATA 1792
Query: 375 LDIATRRVYFADSKLDFIDFCN-YDGTG 401
L I ++++AD + + CN DG+G
Sbjct: 1793 LAIMGDKLWWADQVSEKMGTCNKADGSG 1820
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2342 ECQNLMFWTNWNELHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2401
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2402 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2432
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 2261 IHFGNIQQINDDGSGRTTIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGA 2320
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2321 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNELHPSIMRAALSGANVLTLIEKDIR 2378
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2379 TPNGLAIDHRAEKLYFSDATLDKIE 2403
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3042 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 3091
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3092 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3149
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3150 ---------ALVVDVQNGYLYWTDWGDHSL 3170
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 21/176 (11%)
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
++YW + T A +R + + ++ + L + + R L+W N +
Sbjct: 1629 RVYWSDVRTQ--AIKRAFINGTGVETVVSADLPNAHGLAVDWVSRNLFWTSYDTNKKQIN 1686
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
+ A +DGS + +V G L+ +G++ + L+WTD G+N I MD
Sbjct: 1687 V--ARLDGSFKNAVVQG-------LEQPHGLVVHPLRG---KLYWTD-GDN--ISMANMD 1731
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
GSN + + S + P GL +D ++Y+ S I+ CN DG+ ++ +ID M
Sbjct: 1732 GSNHTLLFSGQ-KGPVGLAIDFPESKLYWISSGNHTINRCNLDGS---ELEVIDTM 1783
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2382 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 2437
Query: 213 W 213
W
Sbjct: 2438 W 2438
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1279 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1328
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1329 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1379
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1380 ---TTLLAGDIEHPRAIALDPRDGILFWT 1405
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 680 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 739
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIER--------IGMDGSNRSTIISTKI 237
+ G+ + +LFWT++ G R+ER + + S R I ++
Sbjct: 740 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLERGVAGAPPTVTLLRSERPPIFEIRM 795
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
Y D ++V +++ C SL + T
Sbjct: 796 Y-------DAQQQQVGTNKCRVNNGGCSSLCLAT 822
>gi|81867523|sp|Q91ZX7.1|LRP1_MOUSE RecName: Full=Prolow-density lipoprotein receptor-related protein 1;
Short=LRP-1; AltName: Full=Alpha-2-macroglobulin
receptor; Short=A2MR; AltName: CD_antigen=CD91; Contains:
RecName: Full=Low-density lipoprotein receptor-related
protein 1 85 kDa subunit; Short=LRP-85; Contains:
RecName: Full=Low-density lipoprotein receptor-related
protein 1 515 kDa subunit; Short=LRP-515; Contains:
RecName: Full=Low-density lipoprotein receptor-related
protein 1 intracellular domain; Short=LRPICD; Flags:
Precursor
gi|15825005|gb|AAL09566.1|AF367720_1 lipoprotein receptor-related protein [Mus musculus]
Length = 4545
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 200/421 (47%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC +G+DE GC + EC K CS C +G C C PG L
Sbjct: 2917 RCVAEALLCNGQDDCGDGSDER-GCHVNECLSRKLSGCSQDCEDLKIGFKCRCRPGFRLK 2975
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ+C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2976 DDGRTCADLDECSTTFPCSQLCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 3035
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 3036 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 3095
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3096 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3155
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS RS I+ TKI WPNGLT+D T R+Y+AD++ D+
Sbjct: 3156 QNG--YLYWTDWGDHSLIGRIGMDGSGRSIIVDTKITWPNGLTVDYVTERIYWADAREDY 3213
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3214 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3239
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 3240 LFEDYVY-----------WTDW-ETKSINRAHKTTGANKTLLIST-LHRPMDLHVFHALR 3286
Query: 381 R 381
+
Sbjct: 3287 Q 3287
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 162/318 (50%), Gaps = 55/318 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV ++++C+G DC +G+DEG C C + C PTP G C C L D
Sbjct: 86 CVPMSRLCNGIQDCMDGSDEGAHCRELRANCSRMGCQHHCVPTPSGPTCYCNSSFQLQAD 145
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLIIS 121
TC+D +EC G CSQ+CTNT GS+ C C EGY+L+ DN +CKA N L+I+
Sbjct: 146 GKTCKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPVLLIA 205
Query: 122 NRHSIL------------------------------------VADLEEKGK--------- 136
N +IL V D + +
Sbjct: 206 NSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDSAAQTQLKCARMPGL 265
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
D +I +S L VE +A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 266 KGFVDEHTINISLS-LHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELY 324
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R V
Sbjct: 325 NPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLV 382
Query: 253 YFADSKLDFIDCKSLEIK 270
Y+AD+ LD+I+ E K
Sbjct: 383 YWADAYLDYIEVVDYEGK 400
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 157/304 (51%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDGK DC +G+DEG CD +C G CS+ C P G +C+CP G L +
Sbjct: 1160 CLPPDKLCDGKDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGS 1217
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1218 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1277
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1278 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1337
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1338 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1397
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R TI + WPNGLT+D +R+ + D++
Sbjct: 1398 RDGI--LFWTDWDASLPRIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDAR 1455
Query: 259 LDFI 262
D I
Sbjct: 1456 SDAI 1459
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 168/431 (38%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1856 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1912
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1913 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1972
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG
Sbjct: 1973 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGH 2030
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D+++D I+ LE N
Sbjct: 2031 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQGGKLYWCDARMDKIERIDLETGENREV 2090
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2091 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGCKDNATDSVPLRTGIGVQLKDIKVFN 2150
Query: 298 KANMDGSNASILVSGQLYE--------ALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G + A +GML C + + + E +
Sbjct: 2151 RDRQKGTNVCAVANGGCQQLCLYRGGGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 2210
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2211 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2269
Query: 396 NYDGTGRQQVI 406
N DG+GR ++
Sbjct: 2270 NDDGSGRTTIV 2280
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 127/261 (48%), Gaps = 35/261 (13%)
Query: 26 PGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ----------DMNEC 74
PGC D+ EC +FG CS C+ T G LC+C + ++++ + D NE
Sbjct: 3821 PGCQDINECL-RFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIADDNEI 3879
Query: 75 EQ--PGYCSQMCTNT-KG-------SYICSCNEGYVLEYDNHTCKAINHS---AAFLIIS 121
PG+ T +G + G V + HT S AA S
Sbjct: 3880 RSLFPGHPHSAYEQTFQGDESVRIDAMDVHVKAGRVYWTNWHTGTISYRSLPPAAPPTTS 3939
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
NRH + ++G H + +SGL + G+A DW+ G++YW DS + IEV G
Sbjct: 3940 NRHRRQI----DRGVTH----LNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEVAQMKGE 3991
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++ I WP
Sbjct: 3992 NRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQDNIQWPT 4049
Query: 242 GLTLDIATRRVYFADSKLDFI 262
GL +D R+Y+AD+KL I
Sbjct: 4050 GLAVDYHNERLYWADAKLSVI 4070
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 163/405 (40%), Gaps = 88/405 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSNT--CHPTPLGALCTCPP 57
RC++ + C+ DC +G+DE C L C +C + C T A C C
Sbjct: 3754 RCLSSSLRCNMFDDCGDGSDE-EDCSIDPKLTSCATNASMCGDEARCVRTEKAAYCACRS 3812
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G CQD+NEC + G CSQ+C NTKG ++CSC ++ ++ TCKA
Sbjct: 3813 GFHTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHN--TCKAEGSEYQV 3870
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L I++ + I G H A + G + V R++ ++V
Sbjct: 3871 LYIADDNEIRSL---FPGHPHSAYEQTFQGDESV-----------------RIDAMDVHV 3910
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ G ++WT+W + IS +
Sbjct: 3911 KAGR--------------------------VYWTNW---------------HTGTISYRS 3929
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P + R D + ++ L++ + + +YW D G + + +
Sbjct: 3930 L-PPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEV--- 3985
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A M G N L+SG + E A+ +D G +Y W+DWG +P+IE MD
Sbjct: 3986 -AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMD 4033
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
G+ R T++ I WP GL +D R+Y+AD+KL I +GT
Sbjct: 4034 GTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT 4078
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 486 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 544
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 545 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 604
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 605 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 662
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 663 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 722
Query: 261 FID 263
I+
Sbjct: 723 RIE 725
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 16/137 (11%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 295 FYFVDD----IDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAMGK---------VFFT 341
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 342 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 401
Query: 402 RQ---QVILIDLMVEFT 415
RQ Q ILI+ + T
Sbjct: 402 RQTIIQGILIEHLYGLT 418
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 130/328 (39%), Gaps = 59/328 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N + C+C L DN TC FL+ + + I DL+
Sbjct: 1548 GPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1604
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1605 NYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1663
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1664 LAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1710
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I ANMDGSN ++L SGQ
Sbjct: 1711 --------------------HPLRGKLYWTD-GDN-----ISMANMDGSNHTLLFSGQKG 1744
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY W G N I R +DGS I + +
Sbjct: 1745 PVGLAIDFPESKLY-----------WISSG-NHTINRCNLDGSELEVIDTMRSQLGKATA 1792
Query: 375 LDIATRRVYFADSKLDFIDFCN-YDGTG 401
L I ++++AD + + CN DG+G
Sbjct: 1793 LAIMGDKLWWADQVSEKMGTCNKADGSG 1820
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2342 ECQNLMFWTNWNELHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2401
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2402 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2432
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 2261 IHFGNIQQINDDGSGRTTIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGA 2320
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2321 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNELHPSIMRAALSGANVLTLIEKDIR 2378
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2379 TPNGLAIDHRAEKLYFSDATLDKIE 2403
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3042 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 3091
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3092 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3149
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3150 ---------ALVVDVQNGYLYWTDWGDHSL 3170
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 21/176 (11%)
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
++YW + T A +R + + ++ + L + + R L+W N +
Sbjct: 1629 RVYWSDVRTQ--AIKRAFINGTGVETVVSADLPNAHGLAVDWVSRNLFWTSYDTNKKQIN 1686
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
+ A +DGS + +V G L+ +G++ + L+WTD G+N I MD
Sbjct: 1687 V--ARLDGSFKNAVVQG-------LEQPHGLVVHPLRG---KLYWTD-GDN--ISMANMD 1731
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
GSN + + S + P GL +D ++Y+ S I+ CN DG+ ++ +ID M
Sbjct: 1732 GSNHTLLFSGQ-KGPVGLAIDFPESKLYWISSGNHTINRCNLDGS---ELEVIDTM 1783
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2382 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 2437
Query: 213 W 213
W
Sbjct: 2438 W 2438
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1279 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1328
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1329 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1379
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1380 ---TTLLAGDIEHPRAIALDPRDGILFWT 1405
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 680 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 739
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIER--------IGMDGSNRSTIISTKI 237
+ G+ + +LFWT++ G R+ER + + S R I ++
Sbjct: 740 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLERGVAGAPPTVTLLRSERPPIFEIRM 795
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
Y D ++V +++ C SL + T
Sbjct: 796 Y-------DAQQQQVGTNKCRVNNGGCSSLCLAT 822
>gi|297692219|ref|XP_002823465.1| PREDICTED: LOW QUALITY PROTEIN: prolow-density lipoprotein
receptor-related protein 1 [Pongo abelii]
Length = 4444
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 200/421 (47%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC + +DE GC + EC HK CS C +G C C PG L
Sbjct: 2816 RCVAEELLCNGQDDCGDSSDER-GCHINECLSHKLSGCSQDCEDLKIGFKCRCRPGFRLK 2874
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2875 DDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 2934
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 2935 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 2994
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 2995 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3054
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++WTDWG++ I RIGMDGS+RS I+ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 3055 QNG--YVYWTDWGDHSLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDY 3112
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3113 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3138
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 3139 LFEDYVY-----------WTDW-ETKSINRAHKTTGTNKTLLIST-LHRPMDLHVFHALR 3185
Query: 381 R 381
+
Sbjct: 3186 Q 3186
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/318 (33%), Positives = 163/318 (51%), Gaps = 55/318 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CV ++++C+G DC +G+DEGP C +L + G C + C PT G C C L
Sbjct: 66 CVPMSRLCNGVQDCMDGSDEGPHCRELRGNCSRLG-CQHHCVPTLDGPTCYCNSSFQLQA 124
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLII 120
D TC+D +EC G CSQ+CTNT GS+IC C EGY+L+ DN +CKA N L+I
Sbjct: 125 DGKTCKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPVDRPPVLLI 184
Query: 121 SNRHSILVADLE------------------------------EKGKDHRAQDIVVSGLDL 150
+N +IL L G + + + +
Sbjct: 185 ANSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDNAAQTQLKCARMPG 244
Query: 151 VEGL------------------AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
++G A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 245 LKGFVDEHTINISLSLHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELY 304
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R V
Sbjct: 305 NPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLV 362
Query: 253 YFADSKLDFIDCKSLEIK 270
Y+AD+ LD+I+ E K
Sbjct: 363 YWADAYLDYIEVVDYEGK 380
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 155/304 (50%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1140 CLPPDKLCDGNDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1197
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1198 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1257
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1258 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1317
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1318 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1377
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R T+ + WPNGLT+D +R+ + D++
Sbjct: 1378 RDGI--LFWTDWDASLPRIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDAR 1435
Query: 259 LDFI 262
D I
Sbjct: 1436 SDAI 1439
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 168/431 (38%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1836 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1892
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1893 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1952
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1953 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2010
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 2011 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGENREV 2070
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2071 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFN 2130
Query: 298 KANMDGSNASILVSGQ-----LYEA---LALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G LY A +GML C + + + E +
Sbjct: 2131 RDRQKGTNVCAVANGGCQQLCLYRGRGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 2190
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2191 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2249
Query: 396 NYDGTGRQQVI 406
N DG+ R ++
Sbjct: 2250 NDDGSRRITIV 2260
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 126/261 (48%), Gaps = 35/261 (13%)
Query: 26 PGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ----------DMNEC 74
PGC D+ EC +FG CS C+ T G LC+C + ++++ + D NE
Sbjct: 3720 PGCQDINECL-RFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIADDNEI 3778
Query: 75 EQ--PGYC----SQMCTNTKGSYI----CSCNEGYVLEYDNHTCKAINHS---AAFLIIS 121
PG+ Q + I G V + HT S AA S
Sbjct: 3779 RSLFPGHPHSAYEQAFQGDESVRIDAMDVHVKAGRVYWTNWHTGTISYRSLPPAAPPTTS 3838
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
NRH + ++G H + +SGL + G+A DW+ G++YW DS + IEV G
Sbjct: 3839 NRHRRQI----DRGVTH----LNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEVAQMXGE 3890
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++ I WP
Sbjct: 3891 NRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQDNIQWPT 3948
Query: 242 GLTLDIATRRVYFADSKLDFI 262
GL +D R+Y+AD+KL I
Sbjct: 3949 GLAVDYHNERLYWADAKLSVI 3969
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 163/405 (40%), Gaps = 88/405 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSNT--CHPTPLGALCTCPP 57
RC++ + C+ DC +G+DE C L C +C + C T A C C
Sbjct: 3653 RCLSSSLRCNMFDDCGDGSDE-EDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRS 3711
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G CQD+NEC + G CSQ+C NTKG ++CSC ++ ++ TCKA
Sbjct: 3712 GFHTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHN--TCKAEGSEYQV 3769
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L I++ + I G H A + G + V R++ ++V
Sbjct: 3770 LYIADDNEIRSL---FPGHPHSAYEQAFQGDESV-----------------RIDAMDVHV 3809
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ G ++WT+W + IS +
Sbjct: 3810 KAGR--------------------------VYWTNW---------------HTGTISYRS 3828
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P + R D + ++ L++ + + +YW D G + + +
Sbjct: 3829 L-PPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEV--- 3884
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A M G N L+SG + E A+ +D G +Y W+DWG +P+IE MD
Sbjct: 3885 -AQMXGENRKTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMD 3932
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
G+ R T++ I WP GL +D R+Y+AD+KL I +GT
Sbjct: 3933 GTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT 3977
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 466 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 524
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 525 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 584
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 585 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 642
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 643 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 702
Query: 261 FID 263
I+
Sbjct: 703 RIE 705
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 42/206 (20%)
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG-------S 304
Y + +++ I S T +++S + W+ G N ++ A M G
Sbjct: 193 TYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDNAAQTQLKCARMPGLKGFVDEH 252
Query: 305 NASILVSGQLYEALALDLENGMLYY------STLKCTR---------------------- 336
+I +S E +A+D G Y+ C R
Sbjct: 253 TINISLSLHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELYNPKGIALD 312
Query: 337 ----WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
+F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I
Sbjct: 313 PAMGKVFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYI 372
Query: 393 DFCNYDGTGRQ---QVILIDLMVEFT 415
+ +Y+G GRQ Q ILI+ + T
Sbjct: 373 EVVDYEGKGRQTIIQGILIEHLYGLT 398
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 138/353 (39%), Gaps = 63/353 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N + C+C L DN TC FL+ + + I DL+
Sbjct: 1528 GPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1584
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1585 NYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1643
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1644 LAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1690
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I ANMDGSN ++L SGQ
Sbjct: 1691 --------------------HPLRGKLYWTD-GDN-----ISMANMDGSNRTLLFSGQKG 1724
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY W G N I R +DGS I + +
Sbjct: 1725 PVGLAIDFPESKLY-----------WISSG-NHTINRCNLDGSGLEVIDAMRSQLGKATA 1772
Query: 375 LDIATRRVYFADSKLDFIDFCN-YDGTG----RQQVILIDLMVEFTNDLMGDN 422
L I ++++AD + + C+ DG+G R L+ M + + D+
Sbjct: 1773 LAIMGDKLWWADQVSEKMGTCSKADGSGSVVLRNSTTLVMHMKVYDESIQLDH 1825
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1259 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1308
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1309 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1359
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1360 ---TTLLAGDIEHPRAIALDPRDGILFWT 1385
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 26/155 (16%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 660 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 719
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIERIGMDG---------SNRSTIISTK 236
+ G+ + +LFWT++ G R+ER G+ G S R I +
Sbjct: 720 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLER-GVGGAPPTVTLLRSERPPIFEIR 774
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
+Y D ++V +++ C SL + T
Sbjct: 775 MY-------DAQQQQVGTNKCRVNNGGCSSLCLAT 802
>gi|241695294|ref|XP_002413042.1| vitellogenin receptor, putative [Ixodes scapularis]
gi|215506856|gb|EEC16350.1| vitellogenin receptor, putative [Ixodes scapularis]
Length = 810
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 137/425 (32%), Positives = 195/425 (45%), Gaps = 96/425 (22%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
+ C+ VCDGK DC DE C EC CS+ C P+G C C PG
Sbjct: 257 GNHCIPKHLVCDGKNDCGAFEDEPRELCHKNECSTGHSGCSDICKDDPIGFHCECHPGFK 316
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLI 119
L+ D+ TC D++EC PG CSQ CTN KG Y C C EGYV E D H CKA FL+
Sbjct: 317 LTEDNRTCDDVDECLIPGSCSQKCTNYKGGYKCECIEGYVPEPRDRHRCKA-KEGVPFLL 375
Query: 120 ISNRHSILVADLE--------EKGKDHRAQD----------------------------- 142
+NR+ I +LE K + A D
Sbjct: 376 FANRNDIRKINLETGEYVEVVSKLRSTIAMDYIYRTGTVIWSDTVKEEISSAPIDTGAPT 435
Query: 143 --IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
I+ L + +GLA DWI H+YW D+ N I V D +G NR L +++ +PR ++++
Sbjct: 436 KVIINKDLHVADGLAVDWIYNHVYWTDTAQNLISVADLDGKNRKALFSEDLDEPRAIVVN 495
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G W+FWTDWG P+IER GMDGS+RS I++T I WPNGL +D ++++++ D+KL
Sbjct: 496 PLEG--WMFWTDWGRQPKIERSGMDGSHRSAIVTTDILWPNGLAIDFVSKQLFWVDAKLH 553
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EAL 318
IG ++ +G+N +++S +
Sbjct: 554 L----------------------------------IGSSDYNGNNRRVILSSPILVKHPF 579
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 378
+LD+ WL+WTDW E+ I ++ T ++ +Y P +DI
Sbjct: 580 SLDVFED-----------WLYWTDW-ESEVINKVNKFTGANLTGLANGVYSP----MDIH 623
Query: 379 TRRVY 383
Y
Sbjct: 624 VYHSY 628
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 105/201 (52%), Gaps = 22/201 (10%)
Query: 229 RSTIISTKIY------WPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
RSTI IY W + + +I++ + I+ K L + + I+ +
Sbjct: 400 RSTIAMDYIYRTGTVIWSDTVKEEISSAPIDTGAPTKVIIN-KDLHVADGLAVDWIYNHV 458
Query: 283 YWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD 342
YW D N + + A++DG N L S L E A+ + N + W+FWTD
Sbjct: 459 YWTDTAQNLISV----ADLDGKNRKALFSEDLDEPRAI-VVNPL--------EGWMFWTD 505
Query: 343 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
WG P+IER GMDGS+RS I++T I WPNGL +D ++++++ D+KL I +Y+G R
Sbjct: 506 WGRQPKIERSGMDGSHRSAIVTTDILWPNGLAIDFVSKQLFWVDAKLHLIGSSDYNGNNR 565
Query: 403 QQVILIDLMVE--FTNDLMGD 421
+ ++ ++V+ F+ D+ D
Sbjct: 566 RVILSSPILVKHPFSLDVFED 586
>gi|357619788|gb|EHJ72227.1| lipophorin receptor [Danaus plexippus]
Length = 837
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 140/431 (32%), Positives = 202/431 (46%), Gaps = 92/431 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L+KVCD + DCPN DE C EC G C+ C TP+G C C G LS
Sbjct: 281 CIPLSKVCDKRPDCPNFEDEPRDRCGEDECAVNNGGCTQKCVDTPVGYYCDCEKGYKLS- 339
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKA------------ 110
D+ TC+D++EC PG CSQ+CTN KG++ C C+ GY + + T CKA
Sbjct: 340 DNRTCEDIDECLDPGACSQICTNEKGTFKCECHPGYARDPRDRTRCKATEGHPSLLFARR 399
Query: 111 -------INHSAAFLIISNRHSILVAD-------------LEEK----GKDHRAQDIVVS 146
++H I+++ S D ++EK D +Q VV
Sbjct: 400 FDIRKISLDHHEMVAIVNDTKSATALDYVFRTGMIFWSDVIDEKIYKAPIDEGSQRTVVI 459
Query: 147 GLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
G L+ +GLA DWI H+YW D+ N IE+ D G R +L +D + +PR + L+P G
Sbjct: 460 GDQLITSDGLAVDWIYNHLYWTDTGKNHIELADLQGNMRKILIRDKLEEPRAIALNPLDG 519
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
W++WTDWG+ P+IER GMDGS+R TI+S + WPNGLTLD+ +RVY+ D+K++
Sbjct: 520 --WMYWTDWGQVPKIERAGMDGSHRQTIVSYDVKWPNGLTLDLVRKRVYWVDAKVN---- 573
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
I N DGS ++ LY + L
Sbjct: 574 ------------------------------TISSCNYDGSGRRVV----LYSSEVL---- 595
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384
+S W++WTDW + +G + I ST N + + VY
Sbjct: 596 -RHPFSITTFEDWVYWTDWDKTAVYRANKFNGKDIEAITSTHTLQ-NPMVI-----HVYH 648
Query: 385 ADSKLDFIDFC 395
+ D +++C
Sbjct: 649 PYRQPDGVNYC 659
>gi|195573969|ref|XP_002104962.1| GD18174 [Drosophila simulans]
gi|194200889|gb|EDX14465.1| GD18174 [Drosophila simulans]
Length = 883
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 162/305 (53%), Gaps = 54/305 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+CV L+KVCD + DCP+G DE G C + EC K G C + C +G C C G LS
Sbjct: 297 QCVPLSKVCDKRKDCPDGEDEPAGKCGINECASKNGGCMHQCIDLKVGHHCECHEGYKLS 356
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D CQD+NECE PG CSQ+C N G + C C GY+ + NHT CKA + A L+++
Sbjct: 357 PDKRNCQDINECEVPGKCSQICVNEMGGFKCECEAGYMRDPKNHTRCKA-SEGHASLLLA 415
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 416 RRH-----DIRKIALDHMEMTSIVNSTKAATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 470
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + G+ VL KD++ PR +
Sbjct: 471 NEKTVVLTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSI 530
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TIIS + WPNG+TLD+ +R+Y+ D
Sbjct: 531 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDG 588
Query: 258 KLDFI 262
KL+ I
Sbjct: 589 KLNVI 593
>gi|351704735|gb|EHB07654.1| Prolow-density lipoprotein receptor-related protein 1 [Heterocephalus
glaber]
Length = 4544
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 199/421 (47%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC +G+DE C + EC K CS C +G C C PG L
Sbjct: 2920 RCVAEVLLCNGQDDCGDGSDER-SCHVNECLSRKLSGCSQDCEDLKIGFKCRCRPGFRLK 2978
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2979 DDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 3038
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 3039 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 3098
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3099 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3158
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS+RS I+ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 3159 QNG--YLYWTDWGDHSLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDY 3216
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3217 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3242
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 3243 LFEDYVY-----------WTDW-ETKSINRAHKTTGANKTLLIST-LHRPMDLHVFHALR 3289
Query: 381 R 381
+
Sbjct: 3290 Q 3290
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 163/318 (51%), Gaps = 55/318 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV ++++C+G DC +G+DEGP C + C + C PT G C C L D
Sbjct: 89 CVPMSRLCNGVQDCVDGSDEGPHCRELQSNCSQLGCQHHCVPTLSGPTCYCNSSFQLQAD 148
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLIIS 121
TC+D +EC G CSQ+CTNT GS+ C C EGY+L+ DN +CKA N L+I+
Sbjct: 149 GKTCKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPVLLIA 208
Query: 122 NRHSIL------------------------------------VADLEEKGK--------- 136
N +IL V D + +
Sbjct: 209 NSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDSAAQTQLKCARMPGL 268
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
D +I +S L VE +A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 269 KGFVDEHTINISLS-LHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELY 327
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R V
Sbjct: 328 NPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLV 385
Query: 253 YFADSKLDFIDCKSLEIK 270
Y+AD+ LD+I+ E K
Sbjct: 386 YWADAYLDYIEVVDYEGK 403
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 157/304 (51%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L +
Sbjct: 1163 CLAPDKLCDGNDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGS 1220
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1221 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1280
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL++ +GK D+ A +
Sbjct: 1281 HEIRRIDLQKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1340
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1341 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1400
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R T+ + WPNGLT+D +R+ + D++
Sbjct: 1401 RDGI--LFWTDWDASLPRIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDAR 1458
Query: 259 LDFI 262
D I
Sbjct: 1459 SDAI 1462
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 169/431 (39%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1859 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPSDK 1915
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1916 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1975
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1976 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2033
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 2034 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGENREV 2093
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2094 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFN 2153
Query: 298 KANMDGSNASILVSGQ-----LYEA---LALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G LY A +GML C + + + E +
Sbjct: 2154 RDRQKGTNVCAVANGGCQQLCLYRGSGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 2213
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2214 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2272
Query: 396 NYDGTGRQQVI 406
N DG+GR ++
Sbjct: 2273 NDDGSGRTTIV 2283
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 163/405 (40%), Gaps = 88/405 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSNT--CHPTPLGALCTCPP 57
C++ + C+ DC +G+DE C L C +C + C T A C C P
Sbjct: 3753 HCLSSSLRCNMFDDCGDGSDE-EDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRP 3811
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G CQD+NEC + G CSQ+C NTKG ++CSC ++ ++ TCKA
Sbjct: 3812 GFHTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHN--TCKAEGSEYQV 3869
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L I++ + I G H A + G + V R++ ++V
Sbjct: 3870 LYIADDNEIRSL---FPGHPHSAYEQAFQGDESV-----------------RIDAMDVHV 3909
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ G ++WT+W + IS +
Sbjct: 3910 KAGR--------------------------VYWTNW---------------HTGTISYRS 3928
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P + R D + ++ L++ + + +YW D G + + +
Sbjct: 3929 L-PPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEV--- 3984
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A M G N L+SG + E A+ +D G +Y W+DWG +P+IE MD
Sbjct: 3985 -AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMD 4032
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
G+ R T++ I WP GL +D R+Y+AD+KL I +GT
Sbjct: 4033 GTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT 4077
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 489 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 547
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 548 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 607
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 608 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 665
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 666 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 725
Query: 261 FID 263
I+
Sbjct: 726 RIE 728
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 16/137 (11%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 298 FYFVDD----IDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAMGK---------VFFT 344
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 345 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 404
Query: 402 RQ---QVILIDLMVEFT 415
RQ Q ILI+ + T
Sbjct: 405 RQTIIQGILIEHLYGLT 421
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 129/328 (39%), Gaps = 59/328 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N + C+C L DN TC FL+ + + I DL+
Sbjct: 1551 GPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1607
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1608 NYIIS-FTVPDIDNVTVLDYDAQEQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1666
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1667 LAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1713
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I ANMDGSN ++L SGQ
Sbjct: 1714 --------------------HPLHGKLYWTD-GDN-----ISMANMDGSNRTLLFSGQKG 1747
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY W G N I +DGS I + +
Sbjct: 1748 PVGLAIDFPENKLY-----------WISSG-NHTINHCNLDGSGLEIIDTMRSQLGKATA 1795
Query: 375 LDIATRRVYFADSKLDFIDFCN-YDGTG 401
L I ++++AD + + CN DG+G
Sbjct: 1796 LAIMGDKLWWADQVSEKMGTCNKADGSG 1823
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2345 ECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2404
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2405 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2435
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 2264 IHFGNIQQINDDGSGRTTIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGA 2323
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2324 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIR 2381
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2382 TPNGLAIDHRAEKLYFSDATLDKIE 2406
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 21/176 (11%)
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
++YW + T A +R + + ++ + L + + R L+W N +
Sbjct: 1632 RVYWSDVRTQ--AIKRAFINGTGVETVVSADLPNAHGLAVDWVSRNLFWTSYDTNKKQIN 1689
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
+ A +DGS + +V G L+ +G++ + L+WTD G+N I MD
Sbjct: 1690 V--ARLDGSFKNAVVQG-------LEQPHGLVVHPLHG---KLYWTD-GDN--ISMANMD 1734
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
GSNR+ + S + P GL +D ++Y+ S I+ CN DG+G + +ID M
Sbjct: 1735 GSNRTLLFSGQ-KGPVGLAIDFPENKLYWISSGNHTINHCNLDGSGLE---IIDTM 1786
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3045 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 3094
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3095 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3152
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3153 ---------ALVVDVQNGYLYWTDWGDHSL 3173
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2385 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 2440
Query: 213 W 213
W
Sbjct: 2441 W 2441
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1282 EIRRIDLQKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1331
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1332 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1382
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1383 ---TTLLAGDIEHPRAIALDPRDGILFWT 1408
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 683 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 742
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIER--------IGMDGSNRSTIISTKI 237
+ G+ + +LFWT++ G R+ER + + S R I ++
Sbjct: 743 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLERGAGGTPPTVTLLRSERPPIFEIRM 798
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
Y D ++V +++ C SL + T
Sbjct: 799 Y-------DAQQQQVGTNKCRVNNGGCSSLCLAT 825
>gi|195349517|ref|XP_002041289.1| GM10223 [Drosophila sechellia]
gi|194122984|gb|EDW45027.1| GM10223 [Drosophila sechellia]
Length = 883
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 162/305 (53%), Gaps = 54/305 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+CV L+KVCD + DCP+G DE G C + EC K G C + C +G C C G LS
Sbjct: 297 QCVPLSKVCDKRKDCPDGEDEPAGKCGINECASKNGGCMHQCIDLKVGHHCECHEGYKLS 356
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D CQD+NECE PG CSQ+C N G + C C GY+ + NHT CKA + A L+++
Sbjct: 357 PDKRNCQDINECEVPGKCSQICVNEMGGFKCECEAGYMRDPKNHTRCKA-SEGHASLLLA 415
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 416 RRH-----DIRKIALDHMEMTSIVNSTKAATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 470
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + G+ VL KD++ PR +
Sbjct: 471 NEKTVVLTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSI 530
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TIIS + WPNG+TLD+ +R+Y+ D
Sbjct: 531 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDG 588
Query: 258 KLDFI 262
KL+ I
Sbjct: 589 KLNVI 593
>gi|281362594|ref|NP_001097933.2| lipophorin receptor 1, isoform J [Drosophila melanogaster]
gi|39840984|gb|AAR31128.1| RE40649p [Drosophila melanogaster]
gi|272477177|gb|ABW08773.2| lipophorin receptor 1, isoform J [Drosophila melanogaster]
Length = 996
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 162/305 (53%), Gaps = 54/305 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+CV L+KVCD + DCP+G DE G C + EC K G C + C +G C C G LS
Sbjct: 404 QCVPLSKVCDKRKDCPDGEDEPAGKCGINECASKNGGCMHQCIDLKVGHHCECHEGYKLS 463
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D CQD+NECE PG CSQ+C N G + C C GY+ + NHT CKA + A L+++
Sbjct: 464 PDKRNCQDINECEVPGKCSQICVNEIGGFKCECEAGYMRDPKNHTRCKA-SEGHASLLLA 522
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 523 RRH-----DIRKIALDHMEMTSIVNSTKAATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 577
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + G+ VL KD++ PR +
Sbjct: 578 NEKTVVLTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSI 637
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TIIS + WPNG+TLD+ +R+Y+ D
Sbjct: 638 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDG 695
Query: 258 KLDFI 262
KL+ I
Sbjct: 696 KLNVI 700
>gi|292606979|gb|ADE34168.1| lipophorin receptor short isoform [Nilaparvata lugens]
Length = 907
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 137/409 (33%), Positives = 186/409 (45%), Gaps = 98/409 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADE-GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ + +VCD K DCP G DE G C + EC G CS C TP G C C PG L
Sbjct: 360 CIAMEQVCDRKEDCPQGEDEPGDKCGVNECLDHNGHCSQLCVDTPAGHYCDCHPGYKLV- 418
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D+ TC D++ECE PG CSQ+C N KG++ C C+ GY+ + +HT CKA A+ L+ +
Sbjct: 419 DNRTCDDIDECENPGACSQICINEKGTFKCECHRGYLRDPHDHTRCKATEGHAS-LLFAR 477
Query: 123 RHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------- 151
RH I L DH +V S LD V
Sbjct: 478 RHDIRKISL-----DHHEMTAIVNNTKGASALDFVFRTGMIFWTDIIERKIYKAPIDEGT 532
Query: 152 -------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
+GLA DWI HIYW DS N I + + G+ R VL D I +PR +
Sbjct: 533 ERITVITKDITTADGLAVDWIYNHIYWTDSGKNTIGLSNFEGSMRKVLLTDEIEEPRAIA 592
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
L+P G W++WTDWG +PRIER GMDG++R +IS I WPNGLTLD+ R+Y+ D+K
Sbjct: 593 LNPLDG--WMYWTDWGTSPRIERAGMDGTHRQVVISYDIKWPNGLTLDLVRSRIYWIDAK 650
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
L + N DGSN ++ + ++ L
Sbjct: 651 LS----------------------------------TVSSCNYDGSNRLTIL--RSFDTL 674
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 367
YS W++WTDW + + G N + + + +
Sbjct: 675 KHP-------YSISVFEDWIYWTDWHKVAIFKANKFHGGNITAVTAQHM 716
>gi|126012562|ref|NP_002323.2| prolow-density lipoprotein receptor-related protein 1 precursor [Homo
sapiens]
gi|317373384|sp|Q07954.2|LRP1_HUMAN RecName: Full=Prolow-density lipoprotein receptor-related protein 1;
Short=LRP-1; AltName: Full=Alpha-2-macroglobulin
receptor; Short=A2MR; AltName: Full=Apolipoprotein E
receptor; Short=APOER; AltName: CD_antigen=CD91;
Contains: RecName: Full=Low-density lipoprotein
receptor-related protein 1 85 kDa subunit; Short=LRP-85;
Contains: RecName: Full=Low-density lipoprotein
receptor-related protein 1 515 kDa subunit;
Short=LRP-515; Contains: RecName: Full=Low-density
lipoprotein receptor-related protein 1 intracellular
domain; Short=LRPICD; Flags: Precursor
Length = 4544
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 199/421 (47%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC + +DE GC + EC K CS C +G C C PG L
Sbjct: 2916 RCVAEALLCNGQDDCGDSSDER-GCHINECLSRKLSGCSQDCEDLKIGFKCRCRPGFRLK 2974
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2975 DDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 3034
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 3035 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 3094
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3095 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3154
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS+RS I+ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 3155 QNG--YLYWTDWGDHSLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDY 3212
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3213 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3238
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 3239 LFEDYVY-----------WTDW-ETKSINRAHKTTGTNKTLLIST-LHRPMDLHVFHALR 3285
Query: 381 R 381
+
Sbjct: 3286 Q 3286
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 164/318 (51%), Gaps = 55/318 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV ++++C+G DC +G+DEGP C + C + C PT G C C L D
Sbjct: 85 CVPMSRLCNGVQDCMDGSDEGPHCRELQGNCSRLGCQHHCVPTLDGPTCYCNSSFQLQAD 144
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLIIS 121
TC+D +EC G CSQ+CTNT GS+IC C EGY+L+ DN +CKA N L+I+
Sbjct: 145 GKTCKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPVDRPPVLLIA 204
Query: 122 NRHSIL------------------------------------VADLEEKGK--------- 136
N +IL V D + +
Sbjct: 205 NSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDSAAQTQLKCARMPGL 264
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
D +I +S L VE +A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 265 KGFVDEHTINISLS-LHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELY 323
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R V
Sbjct: 324 NPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLV 381
Query: 253 YFADSKLDFIDCKSLEIK 270
Y+AD+ LD+I+ E K
Sbjct: 382 YWADAYLDYIEVVDYEGK 399
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 155/304 (50%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1159 CLPPDKLCDGNDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1216
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1217 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1276
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1277 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1336
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1337 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1396
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R T+ + WPNGLT+D +R+ + D++
Sbjct: 1397 RDGI--LFWTDWDASLPRIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDAR 1454
Query: 259 LDFI 262
D I
Sbjct: 1455 SDAI 1458
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 167/431 (38%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1855 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1911
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1912 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1971
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1972 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2029
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 2030 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGENREV 2089
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2090 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFN 2149
Query: 298 KANMDGSNASILVSGQLYE--------ALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G + A +GML C + + + E +
Sbjct: 2150 RDRQKGTNVCAVANGGCQQLCLYRGRGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 2209
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2210 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2268
Query: 396 NYDGTGRQQVI 406
N DG+ R ++
Sbjct: 2269 NDDGSRRITIV 2279
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 126/261 (48%), Gaps = 35/261 (13%)
Query: 26 PGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ----------DMNEC 74
PGC D+ EC +FG CS C+ T G LC+C + ++++ + D NE
Sbjct: 3820 PGCQDINECL-RFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIADDNEI 3878
Query: 75 EQ--PGYC----SQMCTNTKGSYI----CSCNEGYVLEYDNHTCKAINHS---AAFLIIS 121
PG+ Q + I G V + HT S AA S
Sbjct: 3879 RSLFPGHPHSAYEQAFQGDESVRIDAMDVHVKAGRVYWTNWHTGTISYRSLPPAAPPTTS 3938
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
NRH + ++G H + +SGL + G+A DW+ G++YW DS + IEV G
Sbjct: 3939 NRHRRQI----DRGVTH----LNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEVAQMKGE 3990
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++ I WP
Sbjct: 3991 NRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQDNIQWPT 4048
Query: 242 GLTLDIATRRVYFADSKLDFI 262
GL +D R+Y+AD+KL I
Sbjct: 4049 GLAVDYHNERLYWADAKLSVI 4069
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 163/405 (40%), Gaps = 88/405 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSNT--CHPTPLGALCTCPP 57
RC++ + C+ DC +G+DE C L C +C + C T A C C
Sbjct: 3753 RCLSSSLRCNMFDDCGDGSDE-EDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRS 3811
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G CQD+NEC + G CSQ+C NTKG ++CSC ++ ++ TCKA
Sbjct: 3812 GFHTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHN--TCKAEGSEYQV 3869
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L I++ + I G H A + G + V R++ ++V
Sbjct: 3870 LYIADDNEIRSL---FPGHPHSAYEQAFQGDESV-----------------RIDAMDVHV 3909
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ G ++WT+W + IS +
Sbjct: 3910 KAGR--------------------------VYWTNW---------------HTGTISYRS 3928
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P + R D + ++ L++ + + +YW D G + + +
Sbjct: 3929 L-PPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEV--- 3984
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A M G N L+SG + E A+ +D G +Y W+DWG +P+IE MD
Sbjct: 3985 -AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMD 4032
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
G+ R T++ I WP GL +D R+Y+AD+KL I +GT
Sbjct: 4033 GTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT 4077
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 485 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 543
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 544 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 603
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 604 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 661
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 662 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 721
Query: 261 FID 263
I+
Sbjct: 722 RIE 724
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 16/137 (11%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 294 FYFVDD----IDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAMGK---------VFFT 340
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 341 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 400
Query: 402 RQ---QVILIDLMVEFT 415
RQ Q ILI+ + T
Sbjct: 401 RQTIIQGILIEHLYGLT 417
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 141/362 (38%), Gaps = 66/362 (18%)
Query: 72 NECEQ---PGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL 127
N CE G CS +C N + C+C L DN TC FL+ + + I
Sbjct: 1538 NPCEANGGQGPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYEFK---KFLLYARQMEIR 1594
Query: 128 VADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
DL+ ++ V +D V L YD +YW D R I+ NGT +
Sbjct: 1595 GVDLDAPYYNYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVV 1653
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLD 246
++ G+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1654 SADLPNAHGLAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV- 1709
Query: 247 IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
+ KLYW D G N I ANMDGSN
Sbjct: 1710 -----------------------------HPLRGKLYWTD-GDN-----ISMANMDGSNR 1734
Query: 307 SILVSGQLYE-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
++L SGQ LA+D LY W G N I R +DGS I +
Sbjct: 1735 TLLFSGQKGPVGLAIDFPESKLY-----------WISSG-NHTINRCNLDGSGLEVIDAM 1782
Query: 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCN-YDGTG----RQQVILIDLMVEFTNDLMG 420
+ L I ++++AD + + C+ DG+G R L+ M + +
Sbjct: 1783 RSQLGKATALAIMGDKLWWADQVSEKMGTCSKADGSGSVVLRNSTTLVMHMKVYDESIQL 1842
Query: 421 DN 422
D+
Sbjct: 1843 DH 1844
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2341 ECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2400
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2401 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2431
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 2260 IHFGNIQQINDDGSRRITIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGA 2319
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2320 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIR 2377
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2378 TPNGLAIDHRAEKLYFSDATLDKIE 2402
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3041 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 3090
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3091 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3148
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3149 ---------ALVVDVQNGYLYWTDWGDHSL 3169
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2381 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 2436
Query: 213 W 213
W
Sbjct: 2437 W 2437
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1278 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1327
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1328 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1378
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1379 ---TTLLAGDIEHPRAIALDPRDGILFWT 1404
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 26/155 (16%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 679 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 738
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIERIGMDG---------SNRSTIISTK 236
+ G+ + +LFWT++ G R+ER G+ G S R I +
Sbjct: 739 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLER-GVGGAPPTVTLLRSERPPIFEIR 793
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
+Y D ++V +++ C SL + T
Sbjct: 794 MY-------DAQQQQVGTNKCRVNNGGCSSLCLAT 821
>gi|34339|emb|CAA32112.1| LDL-receptor related precursor (AA -19 to 4525) [Homo sapiens]
gi|3493576|gb|AAC64265.1| lipoprotein receptor-related protein [Homo sapiens]
gi|83699653|gb|ABC40732.1| low density lipoprotein-related protein 1 (alpha-2-macroglobulin
receptor) [Homo sapiens]
Length = 4544
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 199/421 (47%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC + +DE GC + EC K CS C +G C C PG L
Sbjct: 2916 RCVAEALLCNGQDDCGDSSDER-GCHINECLSRKLSGCSQDCEDLKIGFKCRCRPGFRLK 2974
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2975 DDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 3034
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 3035 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 3094
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3095 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3154
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS+RS I+ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 3155 QNG--YLYWTDWGDHSLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDY 3212
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3213 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3238
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 3239 LFEDYVY-----------WTDW-ETKSINRAHKTTGTNKTLLIST-LHRPMDLHVFHALR 3285
Query: 381 R 381
+
Sbjct: 3286 Q 3286
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 164/318 (51%), Gaps = 55/318 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV ++++C+G DC +G+DEGP C + C + C PT G C C L D
Sbjct: 85 CVPMSRLCNGVQDCMDGSDEGPHCRELQGNCSRLGCQHHCVPTLDGPTCYCNSSFQLQAD 144
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLIIS 121
TC+D +EC G CSQ+CTNT GS+IC C EGY+L+ DN +CKA N L+I+
Sbjct: 145 GKTCKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPVDRPPVLLIA 204
Query: 122 NRHSIL------------------------------------VADLEEKGK--------- 136
N +IL V D + +
Sbjct: 205 NSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDSAAQTQLKCARMPGL 264
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
D +I +S L VE +A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 265 KGFVDEHTINISLS-LHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELY 323
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R V
Sbjct: 324 NPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLV 381
Query: 253 YFADSKLDFIDCKSLEIK 270
Y+AD+ LD+I+ E K
Sbjct: 382 YWADAYLDYIEVVDYEGK 399
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 155/304 (50%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1159 CLPPDKLCDGNDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1216
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1217 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1276
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1277 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1336
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1337 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1396
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R T+ + WPNGLT+D +R+ + D++
Sbjct: 1397 RDGI--LFWTDWDASLPRIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDAR 1454
Query: 259 LDFI 262
D I
Sbjct: 1455 SDAI 1458
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 167/431 (38%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1855 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1911
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1912 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1971
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1972 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2029
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 2030 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGENREV 2089
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2090 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFN 2149
Query: 298 KANMDGSNASILVSGQLYE--------ALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G + A +GML C + + + E +
Sbjct: 2150 RDRQKGTNVCAVANGGCQQLCLYRGRGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 2209
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2210 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2268
Query: 396 NYDGTGRQQVI 406
N DG+ R ++
Sbjct: 2269 NDDGSRRITIV 2279
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 126/261 (48%), Gaps = 35/261 (13%)
Query: 26 PGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ----------DMNEC 74
PGC D+ EC +FG CS C+ T G LC+C + ++++ + D NE
Sbjct: 3820 PGCQDINECL-RFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIADDNEI 3878
Query: 75 EQ--PGYC----SQMCTNTKGSYI----CSCNEGYVLEYDNHTCKAINHS---AAFLIIS 121
PG+ Q + I G V + HT S AA S
Sbjct: 3879 RSLFPGHPHSAYEQAFQGDESVRIDAMDVHVKAGRVYWTNWHTGTISYRSLPPAAPPTTS 3938
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
NRH + ++G H + +SGL + G+A DW+ G++YW DS + IEV G
Sbjct: 3939 NRHRRQI----DRGVTH----LNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEVAQMKGE 3990
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++ I WP
Sbjct: 3991 NRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQDNIQWPT 4048
Query: 242 GLTLDIATRRVYFADSKLDFI 262
GL +D R+Y+AD+KL I
Sbjct: 4049 GLAVDYHNERLYWADAKLSVI 4069
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 163/405 (40%), Gaps = 88/405 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSNT--CHPTPLGALCTCPP 57
RC++ + C+ DC +G+DE C L C +C + C T A C C
Sbjct: 3753 RCLSSSLRCNMFDDCGDGSDE-EDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRS 3811
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G CQD+NEC + G CSQ+C NTKG ++CSC ++ ++ TCKA
Sbjct: 3812 GFHTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHN--TCKAEGSEYQV 3869
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L I++ + I G H A + G + V R++ ++V
Sbjct: 3870 LYIADDNEIRSL---FPGHPHSAYEQAFQGDESV-----------------RIDAMDVHV 3909
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ G ++WT+W + IS +
Sbjct: 3910 KAGR--------------------------VYWTNW---------------HTGTISYRS 3928
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P + R D + ++ L++ + + +YW D G + + +
Sbjct: 3929 L-PPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEV--- 3984
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A M G N L+SG + E A+ +D G +Y W+DWG +P+IE MD
Sbjct: 3985 -AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMD 4032
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
G+ R T++ I WP GL +D R+Y+AD+KL I +GT
Sbjct: 4033 GTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT 4077
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 485 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 543
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 544 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 603
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 604 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 661
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 662 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 721
Query: 261 FID 263
I+
Sbjct: 722 RIE 724
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 16/137 (11%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 294 FYFVDD----IDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAMGK---------VFFT 340
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 341 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 400
Query: 402 RQ---QVILIDLMVEFT 415
RQ Q ILI+ + T
Sbjct: 401 RQTIIQGILIEHLYGLT 417
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 141/362 (38%), Gaps = 66/362 (18%)
Query: 72 NECEQ---PGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL 127
N CE G CS +C N + C+C L DN TC FL+ + + I
Sbjct: 1538 NPCEANGGQGPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYEFK---KFLLYARQMEIR 1594
Query: 128 VADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
DL+ ++ V +D V L YD +YW D R I+ NGT +
Sbjct: 1595 GVDLDAPYYNYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVV 1653
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLD 246
++ G+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1654 SADLPNAHGLAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV- 1709
Query: 247 IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
+ KLYW D G N I ANMDGSN
Sbjct: 1710 -----------------------------HPLRGKLYWTD-GDN-----ISMANMDGSNR 1734
Query: 307 SILVSGQLYE-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
++L SGQ LA+D LY W G N I R +DGS I +
Sbjct: 1735 TLLFSGQKGPVGLAIDFPESKLY-----------WISSG-NHTINRCNLDGSGLEVIDAM 1782
Query: 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCN-YDGTG----RQQVILIDLMVEFTNDLMG 420
+ L I ++++AD + + C+ DG+G R L+ M + +
Sbjct: 1783 RSQLGKATALAIMGDKLWWADQVSEKMGTCSKADGSGSVVLRNSTTLVMHMKVYDESIQL 1842
Query: 421 DN 422
D+
Sbjct: 1843 DH 1844
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2341 ECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2400
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2401 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2431
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 2260 IHFGNIQQINDDGSRRITIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGA 2319
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2320 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIR 2377
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2378 TPNGLAIDHRAEKLYFSDATLDKIE 2402
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3041 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 3090
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3091 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3148
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3149 ---------ALVVDVQNGYLYWTDWGDHSL 3169
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2381 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 2436
Query: 213 W 213
W
Sbjct: 2437 W 2437
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1278 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1327
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1328 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1378
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1379 ---TTLLAGDIEHPRAIALDPRDGILFWT 1404
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 26/155 (16%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 679 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 738
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIERIGMDG---------SNRSTIISTK 236
+ G+ + +LFWT++ G R+ER G+ G S R I +
Sbjct: 739 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLER-GVGGAPPTVTLLRSERPPIFEIR 793
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
+Y D ++V +++ C SL + T
Sbjct: 794 MY-------DAQQQQVGTNKCRVNNGGCSSLCLAT 821
>gi|119617397|gb|EAW96991.1| low density lipoprotein-related protein 1 (alpha-2-macroglobulin
receptor), isoform CRA_b [Homo sapiens]
Length = 4485
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 199/421 (47%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC + +DE GC + EC K CS C +G C C PG L
Sbjct: 2857 RCVAEALLCNGQDDCGDSSDER-GCHINECLSRKLSGCSQDCEDLKIGFKCRCRPGFRLK 2915
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2916 DDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 2975
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 2976 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 3035
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3036 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3095
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS+RS I+ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 3096 QNG--YLYWTDWGDHSLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDY 3153
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3154 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3179
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 3180 LFEDYVY-----------WTDW-ETKSINRAHKTTGTNKTLLIST-LHRPMDLHVFHALR 3226
Query: 381 R 381
+
Sbjct: 3227 Q 3227
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 164/318 (51%), Gaps = 55/318 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV ++++C+G DC +G+DEGP C + C + C PT G C C L D
Sbjct: 85 CVPMSRLCNGVQDCMDGSDEGPHCRELQGNCSRLGCQHHCVPTLDGPTCYCNSSFQLQAD 144
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLIIS 121
TC+D +EC G CSQ+CTNT GS+IC C EGY+L+ DN +CKA N L+I+
Sbjct: 145 GKTCKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPVDRPPVLLIA 204
Query: 122 NRHSIL------------------------------------VADLEEKGK--------- 136
N +IL V D + +
Sbjct: 205 NSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDSAAQTQLKCARMPGL 264
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
D +I +S L VE +A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 265 KGFVDEHTINISLS-LHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELY 323
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R V
Sbjct: 324 NPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLV 381
Query: 253 YFADSKLDFIDCKSLEIK 270
Y+AD+ LD+I+ E K
Sbjct: 382 YWADAYLDYIEVVDYEGK 399
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 155/304 (50%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1159 CLPPDKLCDGNDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1216
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1217 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1276
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1277 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1336
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1337 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1396
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R T+ + WPNGLT+D +R+ + D++
Sbjct: 1397 RDGI--LFWTDWDASLPRIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDAR 1454
Query: 259 LDFI 262
D I
Sbjct: 1455 SDAI 1458
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 168/431 (38%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1855 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1911
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1912 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1971
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1972 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2029
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 2030 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGENREV 2089
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2090 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFN 2149
Query: 298 KANMDGSNASILVSGQ-----LYEA---LALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G LY A +GML C + + + E +
Sbjct: 2150 RDRQKGTNVCAVANGGCQQLCLYRGRGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 2209
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2210 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2268
Query: 396 NYDGTGRQQVI 406
N DG+ R ++
Sbjct: 2269 NDDGSRRITIV 2279
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 126/261 (48%), Gaps = 35/261 (13%)
Query: 26 PGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ----------DMNEC 74
PGC D+ EC +FG CS C+ T G LC+C + ++++ + D NE
Sbjct: 3761 PGCQDINECL-RFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIADDNEI 3819
Query: 75 EQ--PGYC----SQMCTNTKGSYI----CSCNEGYVLEYDNHTCKAINHS---AAFLIIS 121
PG+ Q + I G V + HT S AA S
Sbjct: 3820 RSLFPGHPHSAYEQAFQGDESVRIDAMDVHVKAGRVYWTNWHTGTISYRSLPPAAPPTTS 3879
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
NRH + ++G H + +SGL + G+A DW+ G++YW DS + IEV G
Sbjct: 3880 NRHRRQI----DRGVTH----LNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEVAQMKGE 3931
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++ I WP
Sbjct: 3932 NRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQDNIQWPT 3989
Query: 242 GLTLDIATRRVYFADSKLDFI 262
GL +D R+Y+AD+KL I
Sbjct: 3990 GLAVDYHNERLYWADAKLSVI 4010
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 163/405 (40%), Gaps = 88/405 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSNT--CHPTPLGALCTCPP 57
RC++ + C+ DC +G+DE C L C +C + C T A C C
Sbjct: 3694 RCLSSSLRCNMFDDCGDGSDE-EDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRS 3752
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G CQD+NEC + G CSQ+C NTKG ++CSC ++ ++ TCKA
Sbjct: 3753 GFHTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHN--TCKAEGSEYQV 3810
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L I++ + I G H A + G + V R++ ++V
Sbjct: 3811 LYIADDNEIRSL---FPGHPHSAYEQAFQGDESV-----------------RIDAMDVHV 3850
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ G ++WT+W + IS +
Sbjct: 3851 KAGR--------------------------VYWTNW---------------HTGTISYRS 3869
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P + R D + ++ L++ + + +YW D G + + +
Sbjct: 3870 L-PPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEV--- 3925
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A M G N L+SG + E A+ +D G +Y W+DWG +P+IE MD
Sbjct: 3926 -AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMD 3973
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
G+ R T++ I WP GL +D R+Y+AD+KL I +GT
Sbjct: 3974 GTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT 4018
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 485 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 543
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 544 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 603
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 604 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 661
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 662 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 721
Query: 261 FID 263
I+
Sbjct: 722 RIE 724
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 16/137 (11%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 294 FYFVDD----IDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAMGK---------VFFT 340
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 341 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 400
Query: 402 RQ---QVILIDLMVEFT 415
RQ Q ILI+ + T
Sbjct: 401 RQTIIQGILIEHLYGLT 417
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 141/362 (38%), Gaps = 66/362 (18%)
Query: 72 NECEQ---PGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL 127
N CE G CS +C N + C+C L DN TC FL+ + + I
Sbjct: 1538 NPCEANGGQGPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYEFK---KFLLYARQMEIR 1594
Query: 128 VADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
DL+ ++ V +D V L YD +YW D R I+ NGT +
Sbjct: 1595 GVDLDAPYYNYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVV 1653
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLD 246
++ G+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1654 SADLPNAHGLAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV- 1709
Query: 247 IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
+ KLYW D G N I ANMDGSN
Sbjct: 1710 -----------------------------HPLRGKLYWTD-GDN-----ISMANMDGSNR 1734
Query: 307 SILVSGQLYE-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
++L SGQ LA+D LY W G N I R +DGS I +
Sbjct: 1735 TLLFSGQKGPVGLAIDFPESKLY-----------WISSG-NHTINRCNLDGSGLEVIDAM 1782
Query: 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCN-YDGTG----RQQVILIDLMVEFTNDLMG 420
+ L I ++++AD + + C+ DG+G R L+ M + +
Sbjct: 1783 RSQLGKATALAIMGDKLWWADQVSEKMGTCSKADGSGSVVLRNSTTLVMHMKVYDESIQL 1842
Query: 421 DN 422
D+
Sbjct: 1843 DH 1844
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2341 ECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2400
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2401 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2431
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 2260 IHFGNIQQINDDGSRRITIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGA 2319
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2320 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIR 2377
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2378 TPNGLAIDHRAEKLYFSDATLDKIE 2402
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 2982 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 3031
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3032 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3089
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3090 ---------ALVVDVQNGYLYWTDWGDHSL 3110
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2381 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 2436
Query: 213 W 213
W
Sbjct: 2437 W 2437
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1278 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1327
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1328 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1378
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1379 ---TTLLAGDIEHPRAIALDPRDGILFWT 1404
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 26/155 (16%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 679 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 738
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIERIGMDG---------SNRSTIISTK 236
+ G+ + +LFWT++ G R+ER G+ G S R I +
Sbjct: 739 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLER-GVGGAPPTVTLLRSERPPIFEIR 793
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
+Y D ++V +++ C SL + T
Sbjct: 794 MY-------DAQQQQVGTNKCRVNNGGCSSLCLAT 821
>gi|426373114|ref|XP_004053457.1| PREDICTED: prolow-density lipoprotein receptor-related protein 1
[Gorilla gorilla gorilla]
Length = 4544
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 199/421 (47%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC + +DE GC + EC K CS C +G C C PG L
Sbjct: 2916 RCVAEALLCNGQDDCGDSSDER-GCHINECLSRKLSGCSQDCEDLKIGFKCRCRPGFRLK 2974
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2975 DDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 3034
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 3035 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 3094
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3095 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3154
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS+RS I+ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 3155 QNG--YLYWTDWGDHSLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDY 3212
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3213 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3238
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 3239 LFEDYVY-----------WTDW-ETKSINRAHKTTGTNKTLLIST-LHRPMDLHVFHALR 3285
Query: 381 R 381
+
Sbjct: 3286 Q 3286
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/318 (33%), Positives = 163/318 (51%), Gaps = 55/318 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CV ++++C+G DC +G+DEGP C +L + G C + C PT G C C L
Sbjct: 85 CVPMSRLCNGVQDCMDGSDEGPHCRELRGNCSRLG-CQHHCVPTLDGPTCYCNSSFQLQA 143
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLII 120
D TC+D +EC G CSQ+CTNT GS+IC C EGY+L+ DN +CKA N L+I
Sbjct: 144 DGKTCKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPVDRPPVLLI 203
Query: 121 SNRHSILVADLE------------------------------EKGKDHRAQDIVVSGLDL 150
+N +IL L G + + + +
Sbjct: 204 ANSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDNAAQTQLKCARMPG 263
Query: 151 VEGL------------------AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
++G A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 264 LKGFVDEHTINISLSLHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELY 323
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R V
Sbjct: 324 NPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLV 381
Query: 253 YFADSKLDFIDCKSLEIK 270
Y+AD+ LD+I+ E K
Sbjct: 382 YWADAYLDYIEVVDYEGK 399
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 155/304 (50%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1159 CLPPDKLCDGNDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1216
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1217 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1276
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1277 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1336
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1337 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1396
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R T+ + WPNGLT+D +R+ + D++
Sbjct: 1397 RDGI--LFWTDWDASLPRIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDAR 1454
Query: 259 LDFI 262
D I
Sbjct: 1455 SDAI 1458
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 168/431 (38%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1855 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1911
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1912 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1971
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1972 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2029
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 2030 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGENREV 2089
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2090 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFN 2149
Query: 298 KANMDGSNASILVSGQ-----LYEA---LALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G LY A +GML C + + + E +
Sbjct: 2150 RDRQKGTNVCAVANGGCQQLCLYRGRGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 2209
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2210 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2268
Query: 396 NYDGTGRQQVI 406
N DG+ R ++
Sbjct: 2269 NDDGSRRITIV 2279
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 126/261 (48%), Gaps = 35/261 (13%)
Query: 26 PGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ----------DMNEC 74
PGC D+ EC +FG CS C+ T G LC+C + ++++ + D NE
Sbjct: 3820 PGCQDINECL-RFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIADDNEI 3878
Query: 75 EQ--PGYC----SQMCTNTKGSYI----CSCNEGYVLEYDNHTCKAINHS---AAFLIIS 121
PG+ Q + I G V + HT S AA S
Sbjct: 3879 RSLFPGHPHSAYEQAFQGDESVRIDAMDVHVKAGRVYWTNWHTGTISYRSLPPAAPPTTS 3938
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
NRH + ++G H + +SGL + G+A DW+ G++YW DS + IEV G
Sbjct: 3939 NRHRRQI----DRGVTH----LNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEVAQMKGE 3990
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++ I WP
Sbjct: 3991 NRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQDNIQWPT 4048
Query: 242 GLTLDIATRRVYFADSKLDFI 262
GL +D R+Y+AD+KL I
Sbjct: 4049 GLAVDYHNERLYWADAKLSVI 4069
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 163/405 (40%), Gaps = 88/405 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSNT--CHPTPLGALCTCPP 57
RC++ + C+ DC +G+DE C L C +C + C T A C C
Sbjct: 3753 RCLSSSLRCNMFDDCGDGSDE-EDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRS 3811
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G CQD+NEC + G CSQ+C NTKG ++CSC ++ ++ TCKA
Sbjct: 3812 GFHTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHN--TCKAEGSEYQV 3869
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L I++ + I G H A + G + V R++ ++V
Sbjct: 3870 LYIADDNEIRSL---FPGHPHSAYEQAFQGDESV-----------------RIDAMDVHV 3909
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ G ++WT+W + IS +
Sbjct: 3910 KAGR--------------------------VYWTNW---------------HTGTISYRS 3928
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P + R D + ++ L++ + + +YW D G + + +
Sbjct: 3929 L-PPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEV--- 3984
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A M G N L+SG + E A+ +D G +Y W+DWG +P+IE MD
Sbjct: 3985 -AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMD 4032
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
G+ R T++ I WP GL +D R+Y+AD+KL I +GT
Sbjct: 4033 GTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT 4077
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 485 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 543
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 544 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 603
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 604 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 661
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 662 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 721
Query: 261 FID 263
I+
Sbjct: 722 RIE 724
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 42/206 (20%)
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG-------S 304
Y + +++ I S T +++S + W+ G N ++ A M G
Sbjct: 212 TYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDNAAQTQLKCARMPGLKGFVDEH 271
Query: 305 NASILVSGQLYEALALDLENGMLYY------STLKCTR---------------------- 336
+I +S E +A+D G Y+ C R
Sbjct: 272 TINISLSLHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELYNPKGIALD 331
Query: 337 ----WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
+F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I
Sbjct: 332 PAMGKVFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYI 391
Query: 393 DFCNYDGTGRQ---QVILIDLMVEFT 415
+ +Y+G GRQ Q ILI+ + T
Sbjct: 392 EVVDYEGKGRQTIIQGILIEHLYGLT 417
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 138/353 (39%), Gaps = 63/353 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N + C+C L DN TC FL+ + + I DL+
Sbjct: 1547 GPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1603
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1604 NYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1662
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1663 LAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1709
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I ANMDGSN ++L SGQ
Sbjct: 1710 --------------------HPLRGKLYWTD-GDN-----ISMANMDGSNRTLLFSGQKG 1743
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY W G N I R +DGS I + +
Sbjct: 1744 PVGLAIDFPESKLY-----------WISSG-NHTINRCNLDGSGLEVIDAMRSQLGKATA 1791
Query: 375 LDIATRRVYFADSKLDFIDFCN-YDGTG----RQQVILIDLMVEFTNDLMGDN 422
L I ++++AD + + C+ DG+G R L+ M + + D+
Sbjct: 1792 LAIMGDKLWWADQVSEKMGTCSKADGSGSVVLRNSTTLVMHMKVYDESIQLDH 1844
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2341 ECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2400
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2401 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2431
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 2260 IHFGNIQQINDDGSRRITIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGA 2319
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2320 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIR 2377
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2378 TPNGLAIDHRAEKLYFSDATLDKIE 2402
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3041 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 3090
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3091 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3148
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3149 ---------ALVVDVQNGYLYWTDWGDHSL 3169
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2381 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 2436
Query: 213 W 213
W
Sbjct: 2437 W 2437
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1278 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1327
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1328 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1378
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1379 ---TTLLAGDIEHPRAIALDPRDGILFWT 1404
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 26/155 (16%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 679 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 738
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIERIGMDG---------SNRSTIISTK 236
+ G+ + +LFWT++ G R+ER G+ G S R I +
Sbjct: 739 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLER-GVGGAPPTVTLLRSERPPIFEIR 793
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
+Y D ++V +++ C SL + T
Sbjct: 794 MY-------DAQQQQVGTNKCRVNNGGCSSLCLAT 821
>gi|410046577|ref|XP_003952220.1| PREDICTED: LOW QUALITY PROTEIN: prolow-density lipoprotein
receptor-related protein 1 [Pan troglodytes]
Length = 4419
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 199/421 (47%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC + +DE GC + EC K CS C +G C C PG L
Sbjct: 2812 RCVAEALLCNGQDDCGDSSDER-GCHINECLSRKLSGCSQDCEDLKIGFKCRCRPGFRLK 2870
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2871 DDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 2930
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 2931 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 2990
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 2991 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3050
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS+RS I+ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 3051 QNG--YLYWTDWGDHSLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDY 3108
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3109 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3134
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 3135 LFEDYVY-----------WTDW-ETKSINRAHKTTGTNKTLLIST-LHRPMDLHVFHALR 3181
Query: 381 R 381
+
Sbjct: 3182 Q 3182
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 155/304 (50%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1159 CLPPDKLCDGNDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1216
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1217 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1276
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1277 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1336
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1337 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1396
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R T+ + WPNGLT+D +R+ + D++
Sbjct: 1397 RDGI--LFWTDWDASLPRIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDAR 1454
Query: 259 LDFI 262
D I
Sbjct: 1455 SDAI 1458
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 159/318 (50%), Gaps = 55/318 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CV ++++C+G DC +G+DEGP C +L + G C + C PT G C C L
Sbjct: 85 CVPMSRLCNGVQDCMDGSDEGPHCRELRGNCSRLG-CQHHCVPTLDGPTCYCNSSFQLQA 143
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLII 120
D TC+D +EC G CSQ+CTNT GS+IC C EGY+L+ DN +CKA N L+I
Sbjct: 144 DGKTCKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPVDRPPVLLI 203
Query: 121 SNRHSILVADLE------------------------------EKGKDHRAQDIVVSGLDL 150
+N +IL L G + + + +
Sbjct: 204 ANSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDNAAQTQLKCARMPG 263
Query: 151 VEGL------------------AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
++G A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 264 LKGFVDEHTINISLSLHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELY 323
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP+ G +F+TD+G+ P + R MDG NR+ ++ +KI +P+ +TLD +R V
Sbjct: 324 NPKGIALDPAMGK--VFFTDYGQIPXVXRCDMDGQNRTKLVDSKIVFPSRITLDPGSRLV 381
Query: 253 YFADSKLDFIDCKSLEIK 270
Y+AD+ LD+I+ E K
Sbjct: 382 YWADAYLDYIEVVDYEGK 399
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 168/431 (38%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1855 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1911
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1912 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1971
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1972 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2029
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 2030 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGENREV 2089
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2090 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFN 2149
Query: 298 KANMDGSNASILVSGQ-----LYEA---LALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G LY A +GML C + + + E +
Sbjct: 2150 RDRQKGTNVCAVANGGCQQLCLYRGRGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 2209
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2210 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2268
Query: 396 NYDGTGRQQVI 406
N DG+ R ++
Sbjct: 2269 NDDGSRRITIV 2279
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 126/261 (48%), Gaps = 35/261 (13%)
Query: 26 PGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ----------DMNEC 74
PGC D+ EC +FG CS C+ T G LC+C + ++++ + D NE
Sbjct: 3716 PGCQDINECL-RFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIADDNEI 3774
Query: 75 EQ--PGYC----SQMCTNTKGSYI----CSCNEGYVLEYDNHTCKAINHS---AAFLIIS 121
PG+ Q + I G V + HT S AA S
Sbjct: 3775 RSLFPGHPHSAYEQAFQGDESVRIDAMDVHVKAGRVYWTNWHTGTISYRSLPPAAPPTTS 3834
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
NRH + ++G H + +SGL + G+A DW+ G++YW DS + IEV G
Sbjct: 3835 NRHRRQI----DRGVTH----LNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEVAQMKGE 3886
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++ I WP
Sbjct: 3887 NRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQDNIQWPT 3944
Query: 242 GLTLDIATRRVYFADSKLDFI 262
GL +D R+Y+AD+KL I
Sbjct: 3945 GLAVDYHNERLYWADAKLSVI 3965
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 163/405 (40%), Gaps = 88/405 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSNT--CHPTPLGALCTCPP 57
RC++ + C+ DC +G+DE C L C +C + C T A C C
Sbjct: 3649 RCLSSSLRCNMFDDCGDGSDE-EDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRS 3707
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G CQD+NEC + G CSQ+C NTKG ++CSC ++ ++ TCKA
Sbjct: 3708 GFHTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHN--TCKAEGSEYQV 3765
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L I++ + I G H A + G + V R++ ++V
Sbjct: 3766 LYIADDNEIRSL---FPGHPHSAYEQAFQGDESV-----------------RIDAMDVHV 3805
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ G ++WT+W + IS +
Sbjct: 3806 KAGR--------------------------VYWTNW---------------HTGTISYRS 3824
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P + R D + ++ L++ + + +YW D G + + +
Sbjct: 3825 L-PPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEV--- 3880
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A M G N L+SG + E A+ +D G +Y W+DWG +P+IE MD
Sbjct: 3881 -AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMD 3928
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
G+ R T++ I WP GL +D R+Y+AD+KL I +GT
Sbjct: 3929 GTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT 3973
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 485 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 543
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 544 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 603
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 604 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 661
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 662 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 721
Query: 261 FID 263
I+
Sbjct: 722 RIE 724
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 42/206 (20%)
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG-------S 304
Y + +++ I S T +++S + W+ G N ++ A M G
Sbjct: 212 TYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDNAAQTQLKCARMPGLKGFVDEH 271
Query: 305 NASILVSGQLYEALALDLENGMLYY------STLKCTR---------------------- 336
+I +S E +A+D G Y+ C R
Sbjct: 272 TINISLSLHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELYNPKGIALD 331
Query: 337 ----WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
+F+TD+G+ P + R MDG NR+ ++ +KI +P+ +TLD +R VY+AD+ LD+I
Sbjct: 332 PAMGKVFFTDYGQIPXVXRCDMDGQNRTKLVDSKIVFPSRITLDPGSRLVYWADAYLDYI 391
Query: 393 DFCNYDGTGRQ---QVILIDLMVEFT 415
+ +Y+G GRQ Q ILI+ + T
Sbjct: 392 EVVDYEGKGRQTIIQGILIEHLYGLT 417
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 138/353 (39%), Gaps = 63/353 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N + C+C L DN TC FL+ + + I DL+
Sbjct: 1547 GPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1603
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1604 NYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1662
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1663 LAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1709
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I ANMDGSN ++L +GQ
Sbjct: 1710 --------------------HPLRGKLYWTD-GDN-----ISMANMDGSNRTLLFNGQKG 1743
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY W G N I R +DGS I + +
Sbjct: 1744 PVGLAIDFPESKLY-----------WISSG-NHTINRCNLDGSGLEVIDAMRSQLGKATA 1791
Query: 375 LDIATRRVYFADSKLDFIDFCN-YDGTG----RQQVILIDLMVEFTNDLMGDN 422
L I ++++AD + + C+ DG+G R L+ M + + D+
Sbjct: 1792 LAIMGDKLWWADQVSEKMGTCSKADGSGSVVLRNSTTLVMHMKVYDESIQLDH 1844
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 2937 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 2986
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 2987 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3044
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3045 ---------ALVVDVQNGYLYWTDWGDHSL 3065
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1278 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1327
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1328 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1378
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1379 ---TTLLAGDIEHPRAIALDPRDGILFWT 1404
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 26/155 (16%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 679 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 738
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIERIGMDG---------SNRSTIISTK 236
+ G+ + +LFWT++ G R+ER G+ G S R I +
Sbjct: 739 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLER-GVGGAPPTVTLLRSERPPIFEIR 793
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
+Y D ++V +++ C SL + T
Sbjct: 794 MY-------DAQQQQVGTNKCRVNNGGCSSLCLAT 821
>gi|403268915|ref|XP_003926506.1| PREDICTED: prolow-density lipoprotein receptor-related protein 1
[Saimiri boliviensis boliviensis]
Length = 4544
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 199/421 (47%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC + +DE GC + EC K CS C +G C C PG L
Sbjct: 2916 RCVAEALLCNGQDDCGDSSDER-GCHINECLSRKLSGCSQDCEDLKIGFKCRCRPGFRLK 2974
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2975 DDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 3034
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 3035 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 3094
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3095 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3154
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS+RS I+ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 3155 QNG--YLYWTDWGDHSLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDY 3212
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3213 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3238
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 3239 LFEDYVY-----------WTDW-ETKSINRAHKTTGTNKTLLIST-LHRPMDLHVFHALR 3285
Query: 381 R 381
+
Sbjct: 3286 Q 3286
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 166/319 (52%), Gaps = 57/319 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CV ++++C+G DC +G+DEGP C +L + G C + C PT G C C L
Sbjct: 85 CVPMSRLCNGVQDCVDGSDEGPHCRELRGNCSRLG-CQHHCVPTLDGPTCYCNSSFQLQA 143
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLII 120
D TC+D +EC G CSQ+CTNT GS+ C C EGY+L+ DN +CKA N L+I
Sbjct: 144 DGKTCKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPVLLI 203
Query: 121 SNRHSIL------------------------------------VADLEEKGK-------- 136
+N +IL V D + +
Sbjct: 204 ANSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDSAAQTQLKCARMPG 263
Query: 137 -----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI 191
D +I +S L VE +A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 264 LKGFVDEHTINISLS-LHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLEL 322
Query: 192 TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R
Sbjct: 323 YNPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRL 380
Query: 252 VYFADSKLDFIDCKSLEIK 270
VY+AD+ LD+I+ E K
Sbjct: 381 VYWADAYLDYIEVVDYEGK 399
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 155/304 (50%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1159 CLPPDKLCDGNDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1216
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1217 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1276
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1277 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1336
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1337 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1396
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R T+ + WPNGLT+D +R+ + D++
Sbjct: 1397 RDGI--LFWTDWDASLPRIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDAR 1454
Query: 259 LDFI 262
D I
Sbjct: 1455 SDAI 1458
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 167/431 (38%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1855 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1911
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1912 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1971
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1972 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2029
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 2030 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGENREV 2089
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2090 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFN 2149
Query: 298 KANMDGSNASILVSGQLYE--------ALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G + A +GML C + + + E +
Sbjct: 2150 RDRQKGTNVCAVANGGCQQLCLYRGRGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 2209
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2210 KSIHLSDEHNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2268
Query: 396 NYDGTGRQQVI 406
N DG+ R ++
Sbjct: 2269 NDDGSRRITIV 2279
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 126/261 (48%), Gaps = 35/261 (13%)
Query: 26 PGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ----------DMNEC 74
PGC D+ EC +FG CS C+ T G LC+C + ++++ + D NE
Sbjct: 3820 PGCQDINECL-RFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIADDNEI 3878
Query: 75 EQ--PGYC----SQMCTNTKGSYI----CSCNEGYVLEYDNHTCKAINHS---AAFLIIS 121
PG+ Q + I G V + HT S AA S
Sbjct: 3879 RSLFPGHPHSAYEQAFQGDESVRIDAMDVHVKAGRVYWTNWHTGTISYRSLPPAAPPTTS 3938
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
NRH + ++G H + +SGL + G+A DW+ G++YW DS + IEV G
Sbjct: 3939 NRHRRQI----DRGVTH----LNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEVAQMKGE 3990
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++ I WP
Sbjct: 3991 NRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQDNIQWPT 4048
Query: 242 GLTLDIATRRVYFADSKLDFI 262
GL +D R+Y+AD+KL I
Sbjct: 4049 GLAVDYHNERLYWADAKLSVI 4069
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 164/405 (40%), Gaps = 88/405 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSNT--CHPTPLGALCTCPP 57
RC++ + C+ DC +G+DE C+ L C +C + C T A C C
Sbjct: 3753 RCLSSSLRCNLFDDCGDGSDE-EDCNIDPKLTSCTTNASICGDEARCVRTEKAAYCACRS 3811
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G CQD+NEC + G CSQ+C NTKG ++CSC ++ ++ TCKA
Sbjct: 3812 GFHTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHN--TCKAEGSEYQV 3869
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L I++ + I G H A + G + V R++ ++V
Sbjct: 3870 LYIADDNEIRSL---FPGHPHSAYEQAFQGDESV-----------------RIDAMDVHV 3909
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ G ++WT+W + IS +
Sbjct: 3910 KAGR--------------------------VYWTNW---------------HTGTISYRS 3928
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P + R D + ++ L++ + + +YW D G + + +
Sbjct: 3929 L-PPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEV--- 3984
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A M G N L+SG + E A+ +D G +Y W+DWG +P+IE MD
Sbjct: 3985 -AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMD 4032
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
G+ R T++ I WP GL +D R+Y+AD+KL I +GT
Sbjct: 4033 GTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT 4077
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 485 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 543
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 544 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 603
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 604 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 661
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 662 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 721
Query: 261 FID 263
I+
Sbjct: 722 RIE 724
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 16/137 (11%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 294 FYFVDD----IDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAMGK---------VFFT 340
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 341 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 400
Query: 402 RQ---QVILIDLMVEFT 415
RQ Q ILI+ + T
Sbjct: 401 RQTIIQGILIEHLYGLT 417
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 138/353 (39%), Gaps = 63/353 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N + C+C L DN TC FL+ + + I DL+
Sbjct: 1547 GPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1603
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1604 NYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1662
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1663 LAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1709
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I ANMDGS+ ++L SGQ
Sbjct: 1710 --------------------HPLRGKLYWTD-GDN-----ISMANMDGSSRTLLFSGQKG 1743
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY W G N I R +DGS I + +
Sbjct: 1744 PVGLAIDFPESKLY-----------WISSG-NHTINRCNLDGSGLEVIDTMRSQLGKATA 1791
Query: 375 LDIATRRVYFADSKLDFIDFCN-YDGTG----RQQVILIDLMVEFTNDLMGDN 422
L I ++++AD + + CN DG+G R L+ M + + D+
Sbjct: 1792 LAIMGDKLWWADQVSEKMGTCNKADGSGSVVLRNSTTLVMHMKVYDESIQLDH 1844
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2341 ECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2400
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2401 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2431
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 2260 IHFGNIQQINDDGSRRITIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGA 2319
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2320 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIR 2377
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2378 TPNGLAIDHRAEKLYFSDATLDKIE 2402
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3041 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 3090
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3091 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3148
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3149 ---------ALVVDVQNGYLYWTDWGDHSL 3169
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2381 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 2436
Query: 213 W 213
W
Sbjct: 2437 W 2437
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1278 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1327
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1328 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1378
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1379 ---TTLLAGDIEHPRAIALDPRDGILFWT 1404
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 26/155 (16%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 679 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILFNGTDRKIVYE 738
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIERIGMDG---------SNRSTIISTK 236
+ G+ + +LFWT++ G R+ER G+ G S R I +
Sbjct: 739 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLER-GIGGAPPTVTLLRSERPPIFEIR 793
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
+Y D ++V +++ C SL + T
Sbjct: 794 MY-------DAQQQQVGTNKCRVNNGGCSSLCLAT 821
>gi|397509011|ref|XP_003824931.1| PREDICTED: prolow-density lipoprotein receptor-related protein 1 [Pan
paniscus]
Length = 4544
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 199/421 (47%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC + +DE GC + EC K CS C +G C C PG L
Sbjct: 2916 RCVAEALLCNGQDDCGDSSDER-GCHINECLSRKLSGCSQDCEDLKIGFKCRCRPGFRLK 2974
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2975 DDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 3034
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 3035 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 3094
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3095 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3154
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS+RS I+ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 3155 QNG--YLYWTDWGDHSLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDY 3212
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3213 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3238
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 3239 LFEDYVY-----------WTDW-ETKSINRAHKTTGTNKTLLIST-LHRPMDLHVFHALR 3285
Query: 381 R 381
+
Sbjct: 3286 Q 3286
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 155/304 (50%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1159 CLPPDKLCDGNDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1216
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1217 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1276
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1277 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1336
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1337 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1396
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R T+ + WPNGLT+D +R+ + D++
Sbjct: 1397 RDGI--LFWTDWDASLPRIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDAR 1454
Query: 259 LDFI 262
D I
Sbjct: 1455 SDAI 1458
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 107/318 (33%), Positives = 162/318 (50%), Gaps = 55/318 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CV ++ +C+G DC +G+DEGP C +L + G C + C PT G C C L
Sbjct: 85 CVPMSHLCNGVQDCMDGSDEGPHCRELRGNCSRLG-CQHHCVPTLDGPTCYCNSSFQLQA 143
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLII 120
D TC+D +EC G CSQ+CTNT GS+IC C EGY+L+ DN +CKA N L+I
Sbjct: 144 DGKTCKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPVDRPPVLLI 203
Query: 121 SNRHSILVADLE------------------------------EKGKDHRAQDIVVSGLDL 150
+N +IL L G + + + +
Sbjct: 204 ANSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDNAAQTQLKCARMPG 263
Query: 151 VEGL------------------AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
++G A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 264 LKGFVDEHTINISLSLHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELY 323
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R V
Sbjct: 324 NPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLV 381
Query: 253 YFADSKLDFIDCKSLEIK 270
Y+AD+ LD+I+ E K
Sbjct: 382 YWADAYLDYIEVVDYEGK 399
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 167/431 (38%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1855 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1911
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1912 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1971
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1972 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2029
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 2030 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGENREV 2089
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2090 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFN 2149
Query: 298 KANMDGSNASILVSGQLYE--------ALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G + A +GML C + + + E +
Sbjct: 2150 RDRQKGTNVCAVANGGCQQLCLYRGRGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 2209
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2210 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2268
Query: 396 NYDGTGRQQVI 406
N DG+ R ++
Sbjct: 2269 NDDGSRRITIV 2279
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 126/261 (48%), Gaps = 35/261 (13%)
Query: 26 PGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ----------DMNEC 74
PGC D+ EC +FG CS C+ T G LC+C + ++++ + D NE
Sbjct: 3820 PGCQDINECL-RFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIADDNEI 3878
Query: 75 EQ--PGYC----SQMCTNTKGSYI----CSCNEGYVLEYDNHTCKAINHS---AAFLIIS 121
PG+ Q + I G V + HT S AA S
Sbjct: 3879 RSLFPGHPHSAYEQAFQGDESVRIDAMDVHVKAGRVYWTNWHTGTISYRSLPPAAPPTTS 3938
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
NRH + ++G H + +SGL + G+A DW+ G++YW DS + IEV G
Sbjct: 3939 NRHRRQI----DRGVTH----LNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEVAQMKGE 3990
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++ I WP
Sbjct: 3991 NRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQDNIQWPT 4048
Query: 242 GLTLDIATRRVYFADSKLDFI 262
GL +D R+Y+AD+KL I
Sbjct: 4049 GLAVDYHNERLYWADAKLSVI 4069
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 163/405 (40%), Gaps = 88/405 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSNT--CHPTPLGALCTCPP 57
RC++ + C+ DC +G+DE C L C +C + C T A C C
Sbjct: 3753 RCLSSSLRCNMFDDCGDGSDE-EDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRS 3811
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G CQD+NEC + G CSQ+C NTKG ++CSC ++ ++ TCKA
Sbjct: 3812 GFHTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHN--TCKAEGSEYQV 3869
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L I++ + I G H A + G + V R++ ++V
Sbjct: 3870 LYIADDNEIRSL---FPGHPHSAYEQAFQGDESV-----------------RIDAMDVHV 3909
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ G ++WT+W + IS +
Sbjct: 3910 KAGR--------------------------VYWTNW---------------HTGTISYRS 3928
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P + R D + ++ L++ + + +YW D G + + +
Sbjct: 3929 L-PPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEV--- 3984
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A M G N L+SG + E A+ +D G +Y W+DWG +P+IE MD
Sbjct: 3985 -AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMD 4032
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
G+ R T++ I WP GL +D R+Y+AD+KL I +GT
Sbjct: 4033 GTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT 4077
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 485 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 543
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 544 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 603
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 604 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 661
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 662 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 721
Query: 261 FID 263
I+
Sbjct: 722 RIE 724
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 42/206 (20%)
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG-------S 304
Y + +++ I S T +++S + W+ G N ++ A M G
Sbjct: 212 TYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDNAAQTQLKCARMPGLKGFVDEH 271
Query: 305 NASILVSGQLYEALALDLENGMLYY------STLKCTR---------------------- 336
+I +S E +A+D G Y+ C R
Sbjct: 272 TINISLSLHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELYNPKGIALD 331
Query: 337 ----WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
+F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I
Sbjct: 332 PAMGKVFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYI 391
Query: 393 DFCNYDGTGRQ---QVILIDLMVEFT 415
+ +Y+G GRQ Q ILI+ + T
Sbjct: 392 EVVDYEGKGRQTIIQGILIEHLYGLT 417
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 138/353 (39%), Gaps = 63/353 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N + C+C L DN TC FL+ + + I DL+
Sbjct: 1547 GPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1603
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1604 NYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1662
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1663 LAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1709
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I ANMDGSN ++L +GQ
Sbjct: 1710 --------------------HPLRGKLYWTD-GDN-----ISMANMDGSNRTLLFNGQKG 1743
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY W G N I R +DGS I + +
Sbjct: 1744 PVGLAIDFPESKLY-----------WISSG-NHTINRCNLDGSGLEVIDAMRSQLGKATA 1791
Query: 375 LDIATRRVYFADSKLDFIDFCN-YDGTG----RQQVILIDLMVEFTNDLMGDN 422
L I ++++AD + + C+ DG+G R L+ M + + D+
Sbjct: 1792 LAIMGDKLWWADQVSEKMGTCSKADGSGSVVLRNSTTLVMHMKVYDESIQLDH 1844
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2341 ECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2400
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2401 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2431
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 2260 IHFGNIQQINDDGSRRITIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGA 2319
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2320 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIR 2377
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2378 TPNGLAIDHRAEKLYFSDATLDKIE 2402
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3041 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 3090
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3091 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3148
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3149 ---------ALVVDVQNGYLYWTDWGDHSL 3169
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2381 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 2436
Query: 213 W 213
W
Sbjct: 2437 W 2437
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1278 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1327
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1328 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1378
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1379 ---TTLLAGDIEHPRAIALDPRDGILFWT 1404
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 26/155 (16%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 679 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 738
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIERIGMDG---------SNRSTIISTK 236
+ G+ + +LFWT++ G R+ER G+ G S R I +
Sbjct: 739 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLER-GVGGAPPTVTLLRSERPPIFEIR 793
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
+Y D ++V +++ C SL + T
Sbjct: 794 MY-------DAQQQQVGTNKCRVNNGGCSSLCLAT 821
>gi|292606977|gb|ADE34167.1| lipophorin receptor long isoform [Nilaparvata lugens]
Length = 921
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 122/304 (40%), Positives = 158/304 (51%), Gaps = 55/304 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADE-GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ + +VCD K DCP G DE G C + EC G CS C TP G C C PG L
Sbjct: 374 CIAMEQVCDRKEDCPQGEDEPGDKCGVNECLDHNGHCSQLCVDTPAGHYCDCHPGYKLV- 432
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D+ TC D++ECE PG CSQ+C N KG++ C C+ GY+ + +HT CKA A+ L+ +
Sbjct: 433 DNRTCDDIDECENPGACSQICINEKGTFKCECHRGYLRDPHDHTRCKATEGHAS-LLFAR 491
Query: 123 RHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------- 151
RH I L DH +V S LD V
Sbjct: 492 RHDIRKISL-----DHHEMTAIVNNTKGASALDFVFRTGMIFWTDIIERKIYKAPIDEGT 546
Query: 152 -------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
+GLA DWI HIYW DS N I + + G+ R VL D I +PR +
Sbjct: 547 ERITVITKDITTADGLAVDWIYNHIYWTDSGKNTIGLSNFEGSMRKVLLTDEIEEPRAIA 606
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
L+P G W++WTDWG +PRIER GMDG++R +IS I WPNGLTLD+ R+Y+ D+K
Sbjct: 607 LNPLDG--WMYWTDWGTSPRIERAGMDGTHRQVVISYDIKWPNGLTLDLVRSRIYWIDAK 664
Query: 259 LDFI 262
L +
Sbjct: 665 LSTV 668
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 131 LEEKGKDHRAQDIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK- 188
+E G D + +V+S + GL D + IYW+D++L+ + C+ +G+NR+ + +
Sbjct: 625 IERAGMDGTHRQVVISYDIKWPNGLTLDLVRSRIYWIDAKLSTVSSCNYDGSNRLTILRS 684
Query: 189 -DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
D + P + S W++WTDW + + G N + + + +
Sbjct: 685 FDTLKHPYSI----SVFEDWIYWTDWHKVAIFKANKFHGGNITAVTAQHM 730
>gi|344246161|gb|EGW02265.1| Prolow-density lipoprotein receptor-related protein 1 [Cricetulus
griseus]
Length = 2217
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 140/405 (34%), Positives = 194/405 (47%), Gaps = 92/405 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC +G+DE GC + EC K CS C +G C C PG L
Sbjct: 589 RCVAEALLCNGQDDCGDGSDER-GCHVNECLNRKLSGCSQDCEDLKIGFKCRCRPGFRLK 647
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ+C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 648 DDGRTCADVDECSTTFPCSQLCVNTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 707
Query: 122 NRHSILVADLEEKGK---------------DHRAQ-----DIVV---------------- 145
NR+ + +L+ D+R Q D+
Sbjct: 708 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 767
Query: 146 ----SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 768 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 827
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS+RS I+ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 828 QNG--YLYWTDWGDHSLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDY 885
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 886 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 911
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIST 365
L +Y WTDW E I R G+N++ +IST
Sbjct: 912 LFEDYVY-----------WTDW-ETKSINRAHKTTGANKTLLIST 944
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 164/405 (40%), Gaps = 88/405 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSNT--CHPTPLGALCTCPP 57
RC++ + C+ DC +G+DE C L C +C + C T A C C
Sbjct: 1426 RCLSSSLRCNMFDDCGDGSDE-EDCSIDPKLTSCATNASICGDEARCMRTEKAAYCACRS 1484
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G CQD+NEC + G CSQ+C NTKGS++CSC ++ ++ TCKA
Sbjct: 1485 GFHTVPGQPGCQDINECLRFGTCSQLCNNTKGSHLCSCARNFMKTHN--TCKAEGSEYQV 1542
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L I++ + I G H A + G + V R++ ++V
Sbjct: 1543 LYIADDNEIRSL---FPGHPHSAYEQTFQGDESV-----------------RIDAMDVHV 1582
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ G ++WT+W + IS +
Sbjct: 1583 KAGR--------------------------VYWTNW---------------HTGTISYRS 1601
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P + R D + ++ L++ + + +YW D G + + +
Sbjct: 1602 L-PPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEV--- 1657
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A M G N L+SG + E A+ +D G +Y W+DWG +P+IE MD
Sbjct: 1658 -AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMD 1705
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
G+ R T++ I WP GL +D R+Y+AD+KL I DGT
Sbjct: 1706 GTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLDGT 1750
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 14 ECQNLMFWTNWNELHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 73
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 74 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 104
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 193 QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
PR +LD +FWT+W E +P I R + G+N T+I I PNGL +D +
Sbjct: 6 HPRAFVLDEC--QNLMFWTNWNELHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEK 63
Query: 252 VYFADSKLDFID 263
+YF+D+ LD I+
Sbjct: 64 LYFSDATLDKIE 75
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 714 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 763
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 764 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 821
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 822 ---------ALVVDVQNGYLYWTDWGDHSL 842
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 54 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 109
Query: 213 W 213
W
Sbjct: 110 W 110
>gi|25012574|gb|AAN71387.1| RE38584p [Drosophila melanogaster]
Length = 739
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 162/305 (53%), Gaps = 54/305 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+CV L+KVCD + DCP+G DE G C + EC K G C + C +G C C G LS
Sbjct: 206 QCVPLSKVCDKRKDCPDGEDEPAGKCGINECASKNGGCMHQCIDLKVGHHCECHEGYKLS 265
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D CQD+NECE PG CSQ+C N G + C C GY+ + NHT CKA + A L+++
Sbjct: 266 PDKRNCQDINECEVPGKCSQICVNEIGGFKCECEAGYMRDPKNHTRCKA-SEGHASLLLA 324
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 325 RRH-----DIRKIALDHMEMTSIVNSTKAATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 379
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + G+ VL KD++ PR +
Sbjct: 380 NEKTVVLTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSI 439
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TIIS + WPNG+TLD+ +R+Y+ D
Sbjct: 440 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDG 497
Query: 258 KLDFI 262
KL+ I
Sbjct: 498 KLNVI 502
>gi|281362598|ref|NP_001163734.1| lipophorin receptor 1, isoform L [Drosophila melanogaster]
gi|272477179|gb|ACZ95028.1| lipophorin receptor 1, isoform L [Drosophila melanogaster]
Length = 978
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 162/305 (53%), Gaps = 54/305 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+CV L+KVCD + DCP+G DE G C + EC K G C + C +G C C G LS
Sbjct: 445 QCVPLSKVCDKRKDCPDGEDEPAGKCGINECASKNGGCMHQCIDLKVGHHCECHEGYKLS 504
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D CQD+NECE PG CSQ+C N G + C C GY+ + NHT CKA + A L+++
Sbjct: 505 PDKRNCQDINECEVPGKCSQICVNEIGGFKCECEAGYMRDPKNHTRCKA-SEGHASLLLA 563
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 564 RRH-----DIRKIALDHMEMTSIVNSTKAATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 618
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + G+ VL KD++ PR +
Sbjct: 619 NEKTVVLTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSI 678
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TIIS + WPNG+TLD+ +R+Y+ D
Sbjct: 679 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDG 736
Query: 258 KLDFI 262
KL+ I
Sbjct: 737 KLNVI 741
>gi|359320553|ref|XP_538245.4| PREDICTED: prolow-density lipoprotein receptor-related protein 1
[Canis lupus familiaris]
Length = 4544
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 198/421 (47%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC +G+DE C + EC K CS C +G C C PG L
Sbjct: 2916 RCVAEALLCNGQDDCGDGSDER-ACHVNECLSRKLSGCSQDCEDLKIGFKCRCRPGFRLK 2974
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2975 DDGRTCADVDECSSTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 3034
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 3035 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 3094
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3095 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3154
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS RS I+ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 3155 QNG--YLYWTDWGDHSLIGRIGMDGSGRSVIVDTKITWPNGLTLDYVTERIYWADAREDY 3212
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3213 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3238
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD-GSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 3239 LFEDYVY-----------WTDW-ETKSINRAHKTMGTNKTLLIST-LHRPMDLHVFHALR 3285
Query: 381 R 381
+
Sbjct: 3286 Q 3286
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 164/318 (51%), Gaps = 55/318 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV ++++C+G DC +G+DEGP C + + C + C PT G C C L D
Sbjct: 85 CVLMSRLCNGVQDCVDGSDEGPHCRELQGQCSQLGCQHHCVPTLNGPTCYCNNSFQLQAD 144
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLIIS 121
TC+D +EC G CSQ+CTNT GS+ C C EGY+L+ DN +CKA N L+I+
Sbjct: 145 GKTCKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPVLLIA 204
Query: 122 NRHSIL------------------------------------VADLEEKGK--------- 136
N +IL V D + +
Sbjct: 205 NSQNILATYLSGAQVSTITPTSTRQTTAMDFSYTNETVCWVHVGDSAAQTQLKCARMPGL 264
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
D +I +S L VE +A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 265 KGFVDEHTINISLS-LHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELY 323
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R V
Sbjct: 324 NPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLV 381
Query: 253 YFADSKLDFIDCKSLEIK 270
Y+AD+ LD+I+ E K
Sbjct: 382 YWADAYLDYIEVVDYEGK 399
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 156/304 (51%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ L K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1159 CLPLDKLCDGNDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1216
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1217 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1276
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1277 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1336
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1337 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1396
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R TI + WPNGLT+D +R+ + D++
Sbjct: 1397 RDGI--LFWTDWDASLPRIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDAR 1454
Query: 259 LDFI 262
D I
Sbjct: 1455 SDAI 1458
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 168/431 (38%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1855 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1911
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1912 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1971
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1972 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2029
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 2030 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGENREV 2089
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2090 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFN 2149
Query: 298 KANMDGSNASILVSGQLYE--------ALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G + A +GML C + + + E +
Sbjct: 2150 RDRQRGTNVCAVANGGCQQLCLYRGGGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 2209
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2210 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2268
Query: 396 NYDGTGRQQVI 406
N DG+GR ++
Sbjct: 2269 NDDGSGRTTIV 2279
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 125/268 (46%), Gaps = 49/268 (18%)
Query: 26 PGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMC 84
PGC D+ EC +FG CS C+ T G LC+C + ++ N C+ G Q+
Sbjct: 3820 PGCQDINECL-RFGTCSQLCNNTKGGHLCSCARNFMKTH--------NTCKAEGSEYQV- 3869
Query: 85 TNTKGSYICSCNEGYVLEYDNHTCKA-----------------INHSAAFLIISNRH--- 124
YI NE L + +H A ++ A + +N H
Sbjct: 3870 -----LYIADDNEIRSL-FPSHPHSAYEQAFQGDESVRIDAMDVHVKAGRVYWTNWHTGT 3923
Query: 125 ----SILVADLEEKGKDHRAQ------DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
S+ A HR Q + +SGL + G+A DW+ G++YW DS + IE
Sbjct: 3924 ISYRSLPPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAVDWVAGNVYWTDSGRDVIE 3983
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V G NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++
Sbjct: 3984 VAQMKGENRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQ 4041
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
I WP GL +D R+Y+AD+KL I
Sbjct: 4042 DNIQWPTGLAVDYHNERLYWADAKLSVI 4069
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 485 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 543
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 544 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 603
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 604 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 661
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 662 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 721
Query: 261 FID 263
I+
Sbjct: 722 RIE 724
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 16/137 (11%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 294 FYFVDD----IDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAMGK---------VFFT 340
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 341 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 400
Query: 402 RQ---QVILIDLMVEFT 415
RQ Q ILI+ + T
Sbjct: 401 RQTIIQGILIEHLYGLT 417
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 30/184 (16%)
Query: 232 IISTKIYWPNGLTLDIATRRVYFA-------------DSKLDFIDCKSLEIKTNVNYSTI 278
+ + ++YW N T I+ R + A D + ++ L++ + +
Sbjct: 3909 VKAGRVYWTNWHTGTISYRSLPPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAVDWV 3968
Query: 279 FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTR 336
+YW D G + + + A M G N L+SG + E A+ +D G +Y
Sbjct: 3969 AGNVYWTDSGRDVIEV----AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-------- 4016
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
W+DWG +P+IE MDG+ R T++ I WP GL +D R+Y+AD+KL I
Sbjct: 4017 ---WSDWGNHPKIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIR 4073
Query: 397 YDGT 400
+GT
Sbjct: 4074 LNGT 4077
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 131/333 (39%), Gaps = 59/333 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N + C+C L DN TC FL+ + + I DL+
Sbjct: 1547 GPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1603
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1604 NYIIS-FTVPDIDNVTVLDYDAHEQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1662
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1663 LAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1709
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I ANMDGSN ++L SGQ
Sbjct: 1710 --------------------HPLRGKLYWTD-GDN-----ISMANMDGSNRTLLFSGQKG 1743
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY W G N I R +DGS I + +
Sbjct: 1744 PVGLAIDFPESKLY-----------WISSG-NHTINRCNLDGSELEVIDAMRSQLGKATA 1791
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
L I ++++AD + + CN G + V+L
Sbjct: 1792 LAIMGDKLWWADQVSEKMGTCN-KADGSESVVL 1823
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2341 ECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2400
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2401 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2431
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 2260 IHFGNIQQINDDGSGRTTIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGA 2319
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2320 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIR 2377
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2378 TPNGLAIDHRAEKLYFSDATLDKIE 2402
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3041 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 3090
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3091 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3148
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3149 ---------ALVVDVQNGYLYWTDWGDHSL 3169
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2381 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 2436
Query: 213 W 213
W
Sbjct: 2437 W 2437
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1278 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1327
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1328 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1378
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1379 ---TTLLAGDIEHPRAIALDPRDGILFWT 1404
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 679 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 738
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIER--------IGMDGSNRSTIISTKI 237
+ G+ + +LFWT++ G R+ER + + S R I ++
Sbjct: 739 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLERGAGGAPPTVTLLRSERPPIFEIRM 794
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
Y D ++V +++ C SL + T
Sbjct: 795 Y-------DAQQQQVGTNKCRVNNGGCSSLCLAT 821
>gi|281362590|ref|NP_996296.2| lipophorin receptor 1, isoform H [Drosophila melanogaster]
gi|39840998|gb|AAR31134.1| LD21010p [Drosophila melanogaster]
gi|272477175|gb|AAF56500.4| lipophorin receptor 1, isoform H [Drosophila melanogaster]
Length = 1037
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 162/305 (53%), Gaps = 54/305 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+CV L+KVCD + DCP+G DE G C + EC K G C + C +G C C G LS
Sbjct: 445 QCVPLSKVCDKRKDCPDGEDEPAGKCGINECASKNGGCMHQCIDLKVGHHCECHEGYKLS 504
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D CQD+NECE PG CSQ+C N G + C C GY+ + NHT CKA + A L+++
Sbjct: 505 PDKRNCQDINECEVPGKCSQICVNEIGGFKCECEAGYMRDPKNHTRCKA-SEGHASLLLA 563
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 564 RRH-----DIRKIALDHMEMTSIVNSTKAATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 618
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + G+ VL KD++ PR +
Sbjct: 619 NEKTVVLTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSI 678
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TIIS + WPNG+TLD+ +R+Y+ D
Sbjct: 679 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDG 736
Query: 258 KLDFI 262
KL+ I
Sbjct: 737 KLNVI 741
>gi|161078655|ref|NP_001097932.1| lipophorin receptor 1, isoform D [Drosophila melanogaster]
gi|158030403|gb|ABW08772.1| lipophorin receptor 1, isoform D [Drosophila melanogaster]
gi|260436885|gb|ACX37661.1| FI11925p [Drosophila melanogaster]
Length = 830
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 162/305 (53%), Gaps = 54/305 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+CV L+KVCD + DCP+G DE G C + EC K G C + C +G C C G LS
Sbjct: 297 QCVPLSKVCDKRKDCPDGEDEPAGKCGINECASKNGGCMHQCIDLKVGHHCECHEGYKLS 356
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D CQD+NECE PG CSQ+C N G + C C GY+ + NHT CKA + A L+++
Sbjct: 357 PDKRNCQDINECEVPGKCSQICVNEIGGFKCECEAGYMRDPKNHTRCKA-SEGHASLLLA 415
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 416 RRH-----DIRKIALDHMEMTSIVNSTKAATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 470
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + G+ VL KD++ PR +
Sbjct: 471 NEKTVVLTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSI 530
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TIIS + WPNG+TLD+ +R+Y+ D
Sbjct: 531 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDG 588
Query: 258 KLDFI 262
KL+ I
Sbjct: 589 KLNVI 593
>gi|442621197|ref|NP_001097931.3| lipophorin receptor 1, isoform S [Drosophila melanogaster]
gi|440217908|gb|ABW08771.3| lipophorin receptor 1, isoform S [Drosophila melanogaster]
Length = 887
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 162/305 (53%), Gaps = 54/305 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+CV L+KVCD + DCP+G DE G C + EC K G C + C +G C C G LS
Sbjct: 295 QCVPLSKVCDKRKDCPDGEDEPAGKCGINECASKNGGCMHQCIDLKVGHHCECHEGYKLS 354
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D CQD+NECE PG CSQ+C N G + C C GY+ + NHT CKA + A L+++
Sbjct: 355 PDKRNCQDINECEVPGKCSQICVNEIGGFKCECEAGYMRDPKNHTRCKA-SEGHASLLLA 413
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 414 RRH-----DIRKIALDHMEMTSIVNSTKAATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 468
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + G+ VL KD++ PR +
Sbjct: 469 NEKTVVLTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSI 528
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TIIS + WPNG+TLD+ +R+Y+ D
Sbjct: 529 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDG 586
Query: 258 KLDFI 262
KL+ I
Sbjct: 587 KLNVI 591
>gi|281362588|ref|NP_733119.2| lipophorin receptor 1, isoform G [Drosophila melanogaster]
gi|272477174|gb|AAF56499.3| lipophorin receptor 1, isoform G [Drosophila melanogaster]
Length = 889
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 162/305 (53%), Gaps = 54/305 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+CV L+KVCD + DCP+G DE G C + EC K G C + C +G C C G LS
Sbjct: 297 QCVPLSKVCDKRKDCPDGEDEPAGKCGINECASKNGGCMHQCIDLKVGHHCECHEGYKLS 356
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D CQD+NECE PG CSQ+C N G + C C GY+ + NHT CKA + A L+++
Sbjct: 357 PDKRNCQDINECEVPGKCSQICVNEIGGFKCECEAGYMRDPKNHTRCKA-SEGHASLLLA 415
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 416 RRH-----DIRKIALDHMEMTSIVNSTKAATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 470
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + G+ VL KD++ PR +
Sbjct: 471 NEKTVVLTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSI 530
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TIIS + WPNG+TLD+ +R+Y+ D
Sbjct: 531 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDG 588
Query: 258 KLDFI 262
KL+ I
Sbjct: 589 KLNVI 593
>gi|442621195|ref|NP_001262974.1| lipophorin receptor 1, isoform R [Drosophila melanogaster]
gi|440217907|gb|AGB96354.1| lipophorin receptor 1, isoform R [Drosophila melanogaster]
Length = 868
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 162/305 (53%), Gaps = 54/305 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+CV L+KVCD + DCP+G DE G C + EC K G C + C +G C C G LS
Sbjct: 335 QCVPLSKVCDKRKDCPDGEDEPAGKCGINECASKNGGCMHQCIDLKVGHHCECHEGYKLS 394
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D CQD+NECE PG CSQ+C N G + C C GY+ + NHT CKA + A L+++
Sbjct: 395 PDKRNCQDINECEVPGKCSQICVNEIGGFKCECEAGYMRDPKNHTRCKA-SEGHASLLLA 453
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 454 RRH-----DIRKIALDHMEMTSIVNSTKAATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 508
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + G+ VL KD++ PR +
Sbjct: 509 NEKTVVLTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSI 568
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TIIS + WPNG+TLD+ +R+Y+ D
Sbjct: 569 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDG 626
Query: 258 KLDFI 262
KL+ I
Sbjct: 627 KLNVI 631
>gi|442621191|ref|NP_001262972.1| lipophorin receptor 1, isoform P [Drosophila melanogaster]
gi|442621193|ref|NP_001262973.1| lipophorin receptor 1, isoform Q [Drosophila melanogaster]
gi|440217905|gb|AGB96352.1| lipophorin receptor 1, isoform P [Drosophila melanogaster]
gi|440217906|gb|AGB96353.1| lipophorin receptor 1, isoform Q [Drosophila melanogaster]
Length = 976
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 162/305 (53%), Gaps = 54/305 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+CV L+KVCD + DCP+G DE G C + EC K G C + C +G C C G LS
Sbjct: 443 QCVPLSKVCDKRKDCPDGEDEPAGKCGINECASKNGGCMHQCIDLKVGHHCECHEGYKLS 502
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D CQD+NECE PG CSQ+C N G + C C GY+ + NHT CKA + A L+++
Sbjct: 503 PDKRNCQDINECEVPGKCSQICVNEIGGFKCECEAGYMRDPKNHTRCKA-SEGHASLLLA 561
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 562 RRH-----DIRKIALDHMEMTSIVNSTKAATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 616
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + G+ VL KD++ PR +
Sbjct: 617 NEKTVVLTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSI 676
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TIIS + WPNG+TLD+ +R+Y+ D
Sbjct: 677 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDG 734
Query: 258 KLDFI 262
KL+ I
Sbjct: 735 KLNVI 739
>gi|281362596|ref|NP_001097934.2| lipophorin receptor 1, isoform K [Drosophila melanogaster]
gi|272477178|gb|ABW08774.2| lipophorin receptor 1, isoform K [Drosophila melanogaster]
Length = 1076
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 162/305 (53%), Gaps = 54/305 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+CV L+KVCD + DCP+G DE G C + EC K G C + C +G C C G LS
Sbjct: 484 QCVPLSKVCDKRKDCPDGEDEPAGKCGINECASKNGGCMHQCIDLKVGHHCECHEGYKLS 543
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D CQD+NECE PG CSQ+C N G + C C GY+ + NHT CKA + A L+++
Sbjct: 544 PDKRNCQDINECEVPGKCSQICVNEIGGFKCECEAGYMRDPKNHTRCKA-SEGHASLLLA 602
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 603 RRH-----DIRKIALDHMEMTSIVNSTKAATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 657
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + G+ VL KD++ PR +
Sbjct: 658 NEKTVVLTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSI 717
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TIIS + WPNG+TLD+ +R+Y+ D
Sbjct: 718 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDG 775
Query: 258 KLDFI 262
KL+ I
Sbjct: 776 KLNVI 780
>gi|194743772|ref|XP_001954374.1| GF18234 [Drosophila ananassae]
gi|190627411|gb|EDV42935.1| GF18234 [Drosophila ananassae]
Length = 1036
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/305 (38%), Positives = 161/305 (52%), Gaps = 54/305 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ L+KVCD + DCP+G DE G C + EC K G C + C +G C C G LS
Sbjct: 448 QCIPLSKVCDKRKDCPDGEDEPAGKCSVNECASKNGGCMHRCVDLAVGHHCECHEGYKLS 507
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D CQD++ECE PG CSQ+C N G Y C C GY+ + NHT CKA + A L+++
Sbjct: 508 ADKRNCQDIDECETPGKCSQICVNEIGGYKCECEAGYMRDPRNHTRCKA-SEGHASLLLA 566
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 567 RRH-----DIRKIALDHMEMTSIVNSTKAATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 621
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + G+ VL KD + PR +
Sbjct: 622 NEKTVVLKQSSVTSDGLAVDWIYNHVYYTDTHKCTIELTNFEGSMGKVLIKDALDIPRSI 681
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TIIS + WPNG+TLD+ +R+Y+ D
Sbjct: 682 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVLKRIYWVDG 739
Query: 258 KLDFI 262
KL+ I
Sbjct: 740 KLNII 744
>gi|441632367|ref|XP_004089687.1| PREDICTED: LOW QUALITY PROTEIN: prolow-density lipoprotein
receptor-related protein 1 [Nomascus leucogenys]
Length = 4440
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 143/425 (33%), Positives = 199/425 (46%), Gaps = 97/425 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC + +DE GC + EC K CS C +G C C PG L
Sbjct: 2811 RCVAEALLCNGQDDCGDSSDER-GCHINECLSRKLSGCSQDCEDLKIGFKCRCRPGFRLK 2869
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2870 DDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 2929
Query: 122 NRHSILVADLEEKGK-------------------DHRAQDIV------------------ 144
NR+ + +L+ D+R Q I
Sbjct: 2930 NRYYLRKLNLDGSNYTLLKQVANPGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNG 2989
Query: 145 -------VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +
Sbjct: 2990 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRAL 3049
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++D G +L+WTDWG++ I RIGMDGS+RS I+ TKI WPNGLTLD T R+Y+AD+
Sbjct: 3050 VVDVQNG--YLYWTDWGDHSLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADA 3107
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
+ D+I+ A++DGSN +++S +
Sbjct: 3108 REDYIE----------------------------------FASLDGSNRHVVLSQDIPHI 3133
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLD 376
AL L +Y WTDW E I R G+N++ +IST ++ P L +
Sbjct: 3134 FALTLFEDYVY-----------WTDW-ETKSINRAHKTTGTNKTLLIST-LHRPMDLHVF 3180
Query: 377 IATRR 381
A R+
Sbjct: 3181 HALRQ 3185
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/318 (33%), Positives = 163/318 (51%), Gaps = 55/318 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CV ++++C+G DC +G+DEGP C +L + G C + C PT G C C L
Sbjct: 85 CVPMSRLCNGVQDCMDGSDEGPHCRELRGNCSRLG-CQHHCVPTLDGPTCYCNSSFQLQA 143
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLII 120
D TC+D +EC G CSQ+CTNT GS+IC C EGY+L+ DN +CKA N L+I
Sbjct: 144 DGKTCKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPVDRPPVLLI 203
Query: 121 SNRHSILVADLE------------------------------EKGKDHRAQDIVVSGLDL 150
+N +IL L G + + + +
Sbjct: 204 ANSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDNAAQTQLKCARMPG 263
Query: 151 VEGL------------------AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
++G A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 264 LKGFVDEHTINISLSLHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELY 323
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R V
Sbjct: 324 NPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLV 381
Query: 253 YFADSKLDFIDCKSLEIK 270
Y+AD+ LD+I+ E K
Sbjct: 382 YWADAYLDYIEVVDYEGK 399
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 112/304 (36%), Positives = 154/304 (50%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1105 CLPPDKLCDGNDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1162
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1163 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1222
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1223 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1282
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1283 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1342
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G L WTDW + PRIE M G+ R T+ + WPNGLT+D +R+ + D++
Sbjct: 1343 RDGI--LXWTDWDASMPRIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDAR 1400
Query: 259 LDFI 262
D I
Sbjct: 1401 SDAI 1404
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 163/405 (40%), Gaps = 88/405 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSNT--CHPTPLGALCTCPP 57
RC++ + C+ DC +G+DE C L C +C + C T A C C
Sbjct: 3649 RCLSFSLRCNMFDDCGDGSDE-EDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRS 3707
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G CQD+NEC + G CSQ+C NTKG ++CSC ++ ++ TCKA
Sbjct: 3708 GFHTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHN--TCKAEGSEYQV 3765
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L I++ + I G H A + G + V R++ ++V
Sbjct: 3766 LYIADDNEIRSL---FPGHPHSAYEQAFQGDESV-----------------RIDAMDVHV 3805
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ G ++WT+W + IS +
Sbjct: 3806 KAGR--------------------------VYWTNW---------------HTGTISYRS 3824
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P + R D + ++ L++ + + +YW D G + + +
Sbjct: 3825 L-PPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEV--- 3880
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A M G N L+SG + E A+ +D G +Y W+DWG +P+IE MD
Sbjct: 3881 -AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMD 3928
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
G+ R T++ I WP GL +D R+Y+AD+KL I +GT
Sbjct: 3929 GTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT 3973
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 26/200 (13%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEE 133
+PG CS +C N+ + C C G+ L D +CK+ FL+
Sbjct: 485 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKSDPEHELFLVYG------------ 532
Query: 134 KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDN 190
KG+ + ++ G+ VEG+A DW+G ++YW D + + ++ R L +
Sbjct: 533 KGRQASSGPRLLKGIHNVEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGK 592
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGL 243
+T PR +++DP G W++WTDW E+P R+ER MDGS+R +++K + WPNGL
Sbjct: 593 MTHPRAIVVDPLNG--WMYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGL 650
Query: 244 TLDIATRRVYFADSKLDFID 263
+LDI R+Y+ D+ D I+
Sbjct: 651 SLDIPAGRLYWVDAFYDRIE 670
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 167/428 (39%), Gaps = 102/428 (23%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAI--------------------NHSAA 116
G CSQ+C T + + C C GY L C+ + + S A
Sbjct: 1801 GDCSQLCLPTSEMTRSCMCTAGYSLRSGQQACEGVGSFLIYYVHEGIRGIPLDPNDKSDA 1860
Query: 117 FLIISNRHSILVADLEEK--------------GKDHRAQ----DIVVSGLDLVEGLAYDW 158
+ +S + D + + R Q D+V +G+ VEG+A DW
Sbjct: 1861 LVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIAVDW 1920
Query: 159 IGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPR 218
I G+IYW D + IEV NG+ R V+ + PR + + P G +LFWT+WG+ PR
Sbjct: 1921 IAGNIYWTDQGFDVIEVARLNGSFRYVVISQCLNDPRAITVHPDKG--YLFWTEWGQYPR 1978
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN------ 272
IER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 1979 IERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGENREVVLS 2038
Query: 273 ------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------KAN 300
+ S +YW D + VPL+ G +
Sbjct: 2039 SNNMDMFSVSVFEDFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFNRDR 2098
Query: 301 MDGSNASILVSGQ-----LYEA---LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
G+N + +G LY A +GML C + + + E ++ I
Sbjct: 2099 QKGTNVCAVANGGCQQLCLYRGRGQRACACAHGMLAEDGASCREYAGYLLYSERTILKSI 2158
Query: 353 GM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
+ D + +I+ + G T R++F+D I N D
Sbjct: 2159 HLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQINDD 2217
Query: 399 GTGRQQVI 406
G+ R ++
Sbjct: 2218 GSRRITIV 2225
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 42/206 (20%)
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG-------S 304
Y + +++ I S T +++S + W+ G N ++ A M G
Sbjct: 212 TYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDNAAQTQLKCARMPGLKGFVDEH 271
Query: 305 NASILVSGQLYEALALDLENGMLYY------STLKCTR---------------------- 336
+I +S E +A+D G Y+ C R
Sbjct: 272 TINISLSLHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELYNPKGIALD 331
Query: 337 ----WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
+F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I
Sbjct: 332 PAMGKVFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYI 391
Query: 393 DFCNYDGTGRQ---QVILIDLMVEFT 415
+ +Y+G GRQ Q ILI+ + T
Sbjct: 392 EVVDYEGKGRQTIIQGILIEHLYGLT 417
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 21/133 (15%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLF 339
LYW D+G + + + L+ G++ A+ +D NG W++
Sbjct: 562 LYWTDDGPKKT-ISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG-----------WMY 609
Query: 340 WTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLDFI 392
WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D I
Sbjct: 610 WTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRI 669
Query: 393 DFCNYDGTGRQQV 405
+ +GT R+ V
Sbjct: 670 ETILLNGTDRKIV 682
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 138/353 (39%), Gaps = 63/353 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N + C+C L DN TC FL+ + + I DL+
Sbjct: 1493 GPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1549
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1550 NYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1608
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1609 LAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1655
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I ANMDGSN ++L SGQ
Sbjct: 1656 --------------------HPLRGKLYWTD-GDN-----ISMANMDGSNRTLLFSGQKG 1689
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY W G N I R +DGS I + +
Sbjct: 1690 PVGLAIDFPESKLY-----------WISSG-NHTINRCNLDGSGLEVIDAMRSQLGKATA 1737
Query: 375 LDIATRRVYFADSKLDFIDFCN-YDGTG----RQQVILIDLMVEFTNDLMGDN 422
L I ++++AD + + C+ DG+G R L+ M + + D+
Sbjct: 1738 LAIMGDKLWWADQVSEKMGTCSKADGSGSVVLRNSTTLVMHMKVYDESIQLDH 1790
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2287 ECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2346
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2347 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2377
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 2206 IHFGNIQQINDDGSRRITIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGA 2265
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2266 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIR 2323
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2324 TPNGLAIDHRAEKLYFSDATLDKIE 2348
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 24/153 (15%)
Query: 298 KANMDGSNASIL---VSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIG 353
K N+DGSN ++L + L A+ALD + Y + ++WTD + I R+
Sbjct: 2936 KLNLDGSNYTLLKQVANPGLNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMH 2986
Query: 354 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
++GSN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 2987 LNGSNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREP 3046
Query: 414 FTNDLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3047 R-----------ALVVDVQNGYLYWTDWGDHSL 3068
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2327 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 2382
Query: 213 W 213
W
Sbjct: 2383 W 2383
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 26/155 (16%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 625 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 684
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIERIGMDG---------SNRSTIISTK 236
+ G+ +LFWT++ G R+ER G+ G S R I +
Sbjct: 685 GPELNHAFGLCHH----GNYLFWTEYRSGSVYRLER-GVGGTPPTVTLLRSERPPIFEIR 739
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
+Y D ++V +++ C SL + T
Sbjct: 740 MY-------DAQQQQVGTNKCRVNNGGCSSLCLAT 767
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1224 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1273
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1274 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1324
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L ++
Sbjct: 1325 ---TTLLAGDIEHPRAIALDPRDGILXWT 1350
>gi|395835250|ref|XP_003790595.1| PREDICTED: prolow-density lipoprotein receptor-related protein 1
[Otolemur garnettii]
Length = 4544
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 138/405 (34%), Positives = 191/405 (47%), Gaps = 92/405 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC +G+DE C + EC K CS C +G C C PG L
Sbjct: 2916 RCVAEALLCNGQDDCGDGSDER-SCHVNECLSRKLSGCSQDCEDLKIGFKCRCRPGFRLK 2974
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GSY C C +GY D H+CKA+ FLI +
Sbjct: 2975 DDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVQGYAPRGGDPHSCKAVTEEEPFLIFA 3034
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 3035 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 3094
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3095 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3154
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS+RS I+ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 3155 QNG--YLYWTDWGDHSLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDY 3212
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3213 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3238
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIST 365
L +Y WTDW E I R G+N++ +IST
Sbjct: 3239 LFEDYVY-----------WTDW-ETKSINRAHKTTGANKTLLIST 3271
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 163/318 (51%), Gaps = 55/318 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CV ++++C+G DC +G+DEGP C +L + G C + C PT G C C L
Sbjct: 85 CVPMSRLCNGVQDCMDGSDEGPHCRELRGNCSRLG-CQHHCVPTLNGPTCYCNNSFQLQA 143
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLII 120
D TC+D +EC G CSQ+CTNT G++ C C EGY+L+ DN +CKA N L+I
Sbjct: 144 DGKTCKDFDECSVYGTCSQLCTNTDGAFTCGCVEGYLLQPDNRSCKAKNEPVDRFPVLLI 203
Query: 121 SNRHSILVADLE---------EKGKDHRAQDIVVS------------------------- 146
+N +IL L + A D + +
Sbjct: 204 ANSQNILATYLSGAQVSTITPTSTRQTTAMDFIYANETVCWVHVGDSAAQTQLKCARMPG 263
Query: 147 --------------GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
L VE +A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 264 LKGFVDEHTINISLSLHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELY 323
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R V
Sbjct: 324 NPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLV 381
Query: 253 YFADSKLDFIDCKSLEIK 270
Y+AD+ LD+I+ E K
Sbjct: 382 YWADAYLDYIEVVDYEGK 399
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 155/304 (50%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1159 CLPPDKLCDGNDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1216
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1217 DNHTCQIQSYCARHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1276
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1277 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1336
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1337 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1396
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R T+ + WPNGLT+D +R+ + D++
Sbjct: 1397 RDGI--LFWTDWDASLPRIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDAR 1454
Query: 259 LDFI 262
D I
Sbjct: 1455 SDAI 1458
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 169/431 (39%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1855 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1911
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1912 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1971
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1972 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2029
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 2030 YPRIERSRLDGTERMVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGENREV 2089
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2090 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFN 2149
Query: 298 KANMDGSNASILVSGQ-----LYEA---LALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G LY A +GML C + + + E +
Sbjct: 2150 RDRQKGTNVCAVANGGCQQLCLYRGGGRRACACAHGMLAEDGASCREYAGYLLYSERTIL 2209
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2210 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2268
Query: 396 NYDGTGRQQVI 406
N DG+GR ++
Sbjct: 2269 NDDGSGRTTIV 2279
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 163/405 (40%), Gaps = 88/405 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSNT--CHPTPLGALCTCPP 57
C+ + C+ DC +G+DE GC L C +C + C T A C C P
Sbjct: 3753 HCLTSSLRCNMFDDCGDGSDE-EGCSIDPKLTSCATNASICGDEARCVHTEKAAYCACRP 3811
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G CQD+NEC + G CSQ+C NTKG ++CSC ++ ++ TCKA
Sbjct: 3812 GFHTVPGQSGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHN--TCKAEGSEYQV 3869
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L I++ + I G H A + G + V R++ ++V
Sbjct: 3870 LYIADDNEIRSL---FPGHPHSAYEQAFQGDESV-----------------RIDAMDVHV 3909
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ G ++WT+W + IS +
Sbjct: 3910 KAGR--------------------------VYWTNW---------------HTGTISYRS 3928
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P + R D + ++ L++ + + +YW D G + + +
Sbjct: 3929 L-PPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEV--- 3984
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A M G N L+SG + E A+ +D G +Y W+DWG +P+IE MD
Sbjct: 3985 -AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMD 4032
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
G+ R T++ I WP GL +D R+Y+AD+KL I +GT
Sbjct: 4033 GTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT 4077
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 485 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 543
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 544 GAKVQDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 603
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 604 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 661
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 662 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 721
Query: 261 FID 263
I+
Sbjct: 722 RIE 724
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 16/137 (11%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 294 FYFVDD----IDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAMGK---------VFFT 340
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 341 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 400
Query: 402 RQ---QVILIDLMVEFT 415
RQ Q ILI+ + T
Sbjct: 401 RQTIIQGILIEHLYGLT 417
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 138/353 (39%), Gaps = 63/353 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N + C+C L DN TC FL+ + + I DL+
Sbjct: 1547 GPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1603
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1604 NYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1662
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1663 LAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1709
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I ANMDGSN ++L SGQ
Sbjct: 1710 --------------------HPLRGKLYWTD-GDN-----ISMANMDGSNRTLLFSGQKG 1743
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY W G N I R +DGS I + +
Sbjct: 1744 PVGLAIDFPESKLY-----------WISSG-NRTINRCDLDGSGLEVIDAMRSQLGKATA 1791
Query: 375 LDIATRRVYFADSKLDFIDFCN-YDGTG----RQQVILIDLMVEFTNDLMGDN 422
L I ++++AD + + C+ DG+G R L+ M + + D+
Sbjct: 1792 LAIMGDKLWWADQVSEKMGTCSKADGSGSVVLRNSTTLVMHMKVYDESIQLDH 1844
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2341 ECQNLMFWTNWNEQHPSIMRAALSGANILTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2400
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2401 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2431
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 2260 IHFGNIQQINDDGSGRTTIVENVGSVEGLAYHRDWDTLYWTSYTTSTISRHTVDQTRPGA 2319
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2320 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANILTLIEKDIR 2377
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2378 TPNGLAIDHRAEKLYFSDATLDKIE 2402
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3041 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 3090
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3091 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3148
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3149 ---------ALVVDVQNGYLYWTDWGDHSL 3169
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2381 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 2436
Query: 213 W 213
W
Sbjct: 2437 W 2437
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1278 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1327
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1328 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1378
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1379 ---TTLLAGDIEHPRAIALDPRDGILFWT 1404
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 26/155 (16%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 679 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 738
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIERIGMDG---------SNRSTIISTK 236
+ G+ + +LFWT++ G R+ER G+ G S R I +
Sbjct: 739 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLER-GVGGAPPTVTLLRSERPPIFEIR 793
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
+Y D ++V +++ C SL + T
Sbjct: 794 MY-------DAQQQQVGTNKCRVNNGGCSSLCLAT 821
>gi|62088576|dbj|BAD92735.1| low density lipoprotein-related protein 1 variant [Homo sapiens]
Length = 2359
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 200/421 (47%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC + +DE GC + EC K CS C +G C C PG L
Sbjct: 732 RCVAEALLCNGQDDCGDSSDER-GCHINECLSRKLSGCSQDCEDLKIGFKCRCRPGFRLK 790
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 791 DDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 850
Query: 122 NRHSILVADLEEKGK---------------DHRAQ-----DIVV---------------- 145
NR+ + +L+ D+R Q D+
Sbjct: 851 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 910
Query: 146 ----SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 911 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 970
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS+RS I+ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 971 QNG--YLYWTDWGDHSLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDY 1028
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 1029 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 1054
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 1055 LFEDYVY-----------WTDW-ETKSINRAHKTTGTNKTLLIST-LHRPMDLHVFHALR 1101
Query: 381 R 381
+
Sbjct: 1102 Q 1102
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 85/148 (57%), Gaps = 10/148 (6%)
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
AA SNRH + ++G H + +SGL + G+A DW+ G++YW DS + IE
Sbjct: 1747 AAPPTTSNRHRRQI----DRGVTH----LNISGLKMPRGIAIDWVAGNVYWTDSGRDVIE 1798
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V G NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++
Sbjct: 1799 VAQMKGENRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQ 1856
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
I WP GL +D R+Y+AD+KL I
Sbjct: 1857 DNIQWPTGLAVDYHNERLYWADAKLSVI 1884
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 163/405 (40%), Gaps = 89/405 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSNT--CHPTPLGALCTCPP 57
RC++ + C+ DC +G+DE C L C +C + C T A C C
Sbjct: 1569 RCLSSLR-CNMFDDCGDGSDE-EDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRS 1626
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G CQD+NEC + G CSQ+C NTKG ++CSC ++ ++ TCKA
Sbjct: 1627 GFHTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHN--TCKAEGSEYQV 1684
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L I++ + I G H A + G + V R++ ++V
Sbjct: 1685 LYIADDNEIRSL---FPGHPHSAYEQAFQGDESV-----------------RIDAMDVHV 1724
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ G ++WT+W + IS +
Sbjct: 1725 KAGR--------------------------VYWTNW---------------HTGTISYRS 1743
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P + R D + ++ L++ + + +YW D G + + +
Sbjct: 1744 L-PPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEV--- 1799
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A M G N L+SG + E A+ +D G +Y W+DWG +P+IE MD
Sbjct: 1800 -AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMD 1847
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
G+ R T++ I WP GL +D R+Y+AD+KL I +GT
Sbjct: 1848 GTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT 1892
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 157 ECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 216
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 217 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 247
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 76 IHFGNIQQINDDGSRRITIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGA 135
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 136 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIR 193
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 194 TPNGLAIDHRAEKLYFSDATLDKIE 218
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 857 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 906
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 907 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 964
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 965 ---------ALVVDVQNGYLYWTDWGDHSL 985
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 197 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 252
Query: 213 W 213
W
Sbjct: 253 W 253
>gi|195054557|ref|XP_001994191.1| GH23437 [Drosophila grimshawi]
gi|193896061|gb|EDV94927.1| GH23437 [Drosophila grimshawi]
Length = 1024
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 178/342 (52%), Gaps = 67/342 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ L+KVCD + DCP+G DE G C++ EC + G C + C +G C C G LS
Sbjct: 491 QCIPLSKVCDKRKDCPDGEDEPAGKCEVNECASRNGGCMHRCVDHLVGYSCDCHQGYKLS 550
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D+ TC D+NECEQPG CSQ+C N G + C C GY+ + NHT CKA A+ L+++
Sbjct: 551 GDNRTCLDVNECEQPGVCSQICVNEVGGFKCECEAGYMRDPRNHTRCKATEGHAS-LLLA 609
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 610 RRH-----DIRKIALDHMEMTSIVNNTKSATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 664
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + +G VL +D++ PR +
Sbjct: 665 NEKTVVLKQSSVTSDGLAVDWIYNHVYYTDTHKCTIELTNFDGNMGKVLIEDSLDIPRSI 724
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TII+ + WPNG+TLD+ +R+Y+ D
Sbjct: 725 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIINYDVKWPNGITLDLVRKRIYWVDG 782
Query: 258 KLDFIDCKSLE--IKTNVNYSTIFRK-----------LYWID 286
KL+ I + + + + YST + + +YW D
Sbjct: 783 KLNVISSANYDGSQRRQILYSTEYLRHPFSISTFEDYIYWTD 824
>gi|84469402|dbj|BAE71409.1| lipophorin receptor [Bombyx mori]
Length = 886
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 135/401 (33%), Positives = 188/401 (46%), Gaps = 86/401 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L+KVCD DCPN DE C EC+ G CS C TP+G C C G L
Sbjct: 354 CIPLSKVCDKHVDCPNFEDEPRDRCGENECEKNNGGCSQRCVDTPIGYYCDCEKGYKLI- 412
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLI--- 119
D+ TC+D++EC PG CSQ+C N KG++ C C+ GY + + T CKA + L
Sbjct: 413 DNRTCEDIDECADPGSCSQICINEKGTFKCECHTGYARDPRDRTRCKATEGHPSLLFARK 472
Query: 120 -----ISNRHSILVADLEEKGK----------------------------DHRAQDIVVS 146
IS H +VA + + D Q VV
Sbjct: 473 HDIRKISLDHHEMVAIVNDTKSATALDYVFRTGMIFWSDVNDEKIYKAPIDEGTQRTVVI 532
Query: 147 GLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
G L+ +GLA DW+ H+YW D+ N IE+ D G R +L +D + +PR + L+P G
Sbjct: 533 GEQLITSDGLAVDWVYNHLYWTDTGHNHIELSDLQGNMRKILIRDRLEEPRAIALNPLEG 592
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
W+FWTDWG+ P+IER GMDGS+RSTI+S + WPNGLTLD+ +RVY+ D+K++ I
Sbjct: 593 --WMFWTDWGQVPKIERAGMDGSHRSTIVSYDVKWPNGLTLDLVRQRVYWVDAKMNTI-- 648
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
++ NY R+L IL S ++
Sbjct: 649 ------SSCNYDGSGRRL-------------------------ILHSTEVLRHP------ 671
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
+S W++WTDW + +G + I ST
Sbjct: 672 ----FSITTFEDWVYWTDWDKTAVHRANKFNGKDVEAITST 708
>gi|156403873|ref|XP_001640132.1| predicted protein [Nematostella vectensis]
gi|156227265|gb|EDO48069.1| predicted protein [Nematostella vectensis]
Length = 635
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 137/449 (30%), Positives = 210/449 (46%), Gaps = 98/449 (21%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EI 60
+ +C+ +KVCDG DC N ADE C + ECK G C + C+ T G C+C PG ++
Sbjct: 219 SKQCIPESKVCDGSVDCTNSADEPDNCFINECKDNNGPCQHYCNDTKTGYFCSCRPGYKV 278
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
+D +C+D++EC PG CSQMC N+KGSY C+C EGY LE D TCKA+ FL+
Sbjct: 279 ALDDPKSCRDVDECAIPGSCSQMCFNSKGSYKCTCMEGYRLEPDKKTCKALG-DKPFLLF 337
Query: 121 SNRHSI--LV---ADLEEKGKDHRA----------------------------------Q 141
+NR I LV +D + RA +
Sbjct: 338 TNRQDIRRLVMDSSDFTQVVPKLRAAIALDYDFATGVIYWSDVIEASIKSAPLNNGSAVE 397
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
IV L +G+A DW+ +YW D+ + IEV + +G R+ L + +PR +++ P
Sbjct: 398 TIVNMSLLTPDGIAVDWVNRKLYWTDTGTDVIEVANLDGRERMRLITTGLQEPRAIVVYP 457
Query: 202 SPGTRWLFWTDWGENPRIERIGMDG--SNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
+ G ++FWTDWGE P+IER GM+G R I++T I WPN LT+D ++++AD+K
Sbjct: 458 AIG--YMFWTDWGEEPKIERCGMNGDPKTRLQIVNTNILWPNALTIDYTIDKIWWADAKE 515
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+C AN+DG+ ++ S ++ A
Sbjct: 516 HTIEC----------------------------------ANLDGTARRVITSDSVHHPFA 541
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + +Y WTDW + + +G +RS ++ + +Y P +DI
Sbjct: 542 ITVFQDYIY-----------WTDWVKESIYKANKFNGKDRS-LVCSGLYSP----MDI-- 583
Query: 380 RRVYFADSKLDFIDFCNYDGTGRQQVILI 408
VY + F + C + G L+
Sbjct: 584 -HVYQQQKQPKFSNPCGENNGGCSHTCLL 611
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 10/116 (8%)
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
I + MD S+ + +V +L A+ALD + T ++W+D E +
Sbjct: 343 IRRLVMDSSDFTQVVP-KLRAAIALDYDFA---------TGVIYWSDVIEASIKSAPLNN 392
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
GS TI++ + P+G+ +D R++Y+ D+ D I+ N DG R ++I L
Sbjct: 393 GSAVETIVNMSLLTPDGIAVDWVNRKLYWTDTGTDVIEVANLDGRERMRLITTGLQ 448
>gi|194908368|ref|XP_001981758.1| GG12223 [Drosophila erecta]
gi|190656396|gb|EDV53628.1| GG12223 [Drosophila erecta]
Length = 1035
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 162/305 (53%), Gaps = 54/305 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ ++KVCD + DCP+G DE G C + EC K G C + C +G C C G LS
Sbjct: 449 QCIPISKVCDKRKDCPDGEDEPAGKCGVNECASKNGGCMHQCIDLKVGHHCQCHKGYTLS 508
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D CQD+NEC+ PG CSQ+C N G + C C GY+ + NHT CKA + A L+++
Sbjct: 509 PDKRNCQDINECDVPGKCSQICVNEIGGFKCECEAGYMRDPKNHTRCKA-SEGHASLLLA 567
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 568 RRH-----DIRKIALDHMEMTSIVNSTKAATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 622
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + G+ VL KD++ PR +
Sbjct: 623 SEKTVVLTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSI 682
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TIIS + WPNG+TLD+ +R+Y+ D
Sbjct: 683 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDG 740
Query: 258 KLDFI 262
KL+ I
Sbjct: 741 KLNVI 745
>gi|162462017|ref|NP_001104808.1| lipophorin receptor isoform 1 precursor [Bombyx mori]
gi|84469396|dbj|BAE71406.1| lipophorin receptor [Bombyx mori]
Length = 908
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 135/401 (33%), Positives = 188/401 (46%), Gaps = 86/401 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L+KVCD DCPN DE C EC+ G CS C TP+G C C G L
Sbjct: 354 CIPLSKVCDKHVDCPNFEDEPRDRCGENECEKNNGGCSQRCVDTPIGYYCDCEKGYKLI- 412
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLI--- 119
D+ TC+D++EC PG CSQ+C N KG++ C C+ GY + + T CKA + L
Sbjct: 413 DNRTCEDIDECADPGSCSQICINEKGTFKCECHTGYARDPRDRTRCKATEGHPSLLFARK 472
Query: 120 -----ISNRHSILVADLEEKGK----------------------------DHRAQDIVVS 146
IS H +VA + + D Q VV
Sbjct: 473 HDIRKISLDHHEMVAIVNDTKSATALDYVFRTGMIFWSDVNDEKIYKAPIDEGTQRTVVI 532
Query: 147 GLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
G L+ +GLA DW+ H+YW D+ N IE+ D G R +L +D + +PR + L+P G
Sbjct: 533 GEQLITSDGLAVDWVYNHLYWTDTGHNHIELSDLQGNMRKILIRDRLEEPRAIALNPLEG 592
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
W+FWTDWG+ P+IER GMDGS+RSTI+S + WPNGLTLD+ +RVY+ D+K++ I
Sbjct: 593 --WMFWTDWGQVPKIERAGMDGSHRSTIVSYDVKWPNGLTLDLVRQRVYWVDAKMNTI-- 648
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
++ NY R+L IL S ++
Sbjct: 649 ------SSCNYDGSGRRL-------------------------ILHSTEVLRHP------ 671
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
+S W++WTDW + +G + I ST
Sbjct: 672 ----FSITTFEDWVYWTDWDKTAVHRANKFNGKDVEAITST 708
>gi|162462046|ref|NP_001104809.1| lipophorin receptor isoform 2 precursor [Bombyx mori]
gi|84469398|dbj|BAE71407.1| lipophorin receptor [Bombyx mori]
Length = 881
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 135/401 (33%), Positives = 188/401 (46%), Gaps = 86/401 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L+KVCD DCPN DE C EC+ G CS C TP+G C C G L
Sbjct: 354 CIPLSKVCDKHVDCPNFEDEPRDRCGENECEKNNGGCSQRCVDTPIGYYCDCEKGYKLI- 412
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLI--- 119
D+ TC+D++EC PG CSQ+C N KG++ C C+ GY + + T CKA + L
Sbjct: 413 DNRTCEDIDECADPGSCSQICINEKGTFKCECHTGYARDPRDRTRCKATEGHPSLLFARK 472
Query: 120 -----ISNRHSILVADLEEKGK----------------------------DHRAQDIVVS 146
IS H +VA + + D Q VV
Sbjct: 473 HDIRKISLDHHEMVAIVNDTKSATALDYVFRTGMIFWSDVNDEKIYKAPIDEGTQRTVVI 532
Query: 147 GLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
G L+ +GLA DW+ H+YW D+ N IE+ D G R +L +D + +PR + L+P G
Sbjct: 533 GEQLITSDGLAVDWVYNHLYWTDTGHNHIELSDLQGNMRKILIRDRLEEPRAIALNPLEG 592
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
W+FWTDWG+ P+IER GMDGS+RSTI+S + WPNGLTLD+ +RVY+ D+K++ I
Sbjct: 593 --WMFWTDWGQVPKIERAGMDGSHRSTIVSYDVKWPNGLTLDLVRQRVYWVDAKMNTI-- 648
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
++ NY R+L IL S ++
Sbjct: 649 ------SSCNYDGSGRRL-------------------------ILHSTEVLRHP------ 671
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
+S W++WTDW + +G + I ST
Sbjct: 672 ----FSITTFEDWVYWTDWDKTAVHRANKFNGKDVEAITST 708
>gi|195395736|ref|XP_002056490.1| GJ10198 [Drosophila virilis]
gi|194143199|gb|EDW59602.1| GJ10198 [Drosophila virilis]
Length = 1019
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 121/336 (36%), Positives = 174/336 (51%), Gaps = 55/336 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ L KVCD + DCP+G DE G CD+ EC K G C + C P+G C C G L+
Sbjct: 481 QCIPLDKVCDKRKDCPDGEDEPAGKCDINECDTKNGGCMHRCVDHPVGYSCECHEGYKLA 540
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFL--- 118
+D C D++ECE+PG CSQ+C N GS+ C C GY+ + NHT CKA A+ L
Sbjct: 541 SDGHHCVDIDECEEPGVCSQICVNEIGSFKCECEAGYMRDSRNHTRCKAAEGHASLLLAR 600
Query: 119 ----------------IISNRHSILVADLEEKG-----KDHRAQDIVVSGLD-------- 149
I++N S D + D Q I + +D
Sbjct: 601 RQDIRKISLDHMEITSIVNNTKSATALDFVFRTGMIFWSDVTTQSIYKAPIDEGNEKTVV 660
Query: 150 ------LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+GLA DWI H+Y+ D+ IE+ + +G VL +D + PR + LDP
Sbjct: 661 LKQSSVTSDGLAVDWIYNHVYYTDTHKCTIELTNFDGNMGKVLIEDALDIPRSIALDPIE 720
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G W++W+DWG +PRIER GMDGS+R+TII+ + WPNG+TLD+ +R+Y+ D KL+ I
Sbjct: 721 G--WMYWSDWGASPRIERAGMDGSHRTTIINYDVKWPNGITLDLVRKRIYWVDGKLNVIS 778
Query: 264 CKSLE--IKTNVNYSTIFRK-----------LYWID 286
+ + + + YST + + +YW D
Sbjct: 779 SANYDGSQRRQILYSTEYLRHPFSISTFEDYIYWTD 814
>gi|94470463|gb|ABF20542.1| lipophorin receptor [Galleria mellonella]
Length = 914
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 133/401 (33%), Positives = 185/401 (46%), Gaps = 86/401 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L+K CD K DCP+ DE C EC G C+ C TP+G C C G L
Sbjct: 358 CIPLSKSCDKKPDCPDFEDEPRDKCGENECAKNNGGCTQRCVDTPVGYYCDCDKGYKLI- 416
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLI--- 119
D+ TC+D++EC PG CSQMC N KG++ C C+ GY + + T CKA + L
Sbjct: 417 DNRTCEDIDECADPGACSQMCINEKGTFKCECHAGYARDPRDRTRCKATEGHPSLLFARR 476
Query: 120 -----ISNRHSILVADLEEKGK----------------------------DHRAQDIVVS 146
IS H +VA + + D +Q VV
Sbjct: 477 FDIRKISLDHHEMVAIVNDTKSATALDYVFRTGMIFWSDVADEKIYKAPIDEGSQRTVVI 536
Query: 147 GLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
G L+ +GLA DWI H+YW D+ N IE+ D G R +L +D + +PR + L+P G
Sbjct: 537 GDQLITSDGLAVDWIYNHLYWTDTGKNHIELSDLQGNMRKILIRDQLEEPRAIALNPLDG 596
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
W++WTDWG+ P+IER GMDGS+R TI+S ++ WPNGLTLD+ +RVY+ D+KL+
Sbjct: 597 --WMYWTDWGQTPKIERAGMDGSHRQTIVSYEVKWPNGLTLDLVRKRVYWVDAKLN---- 650
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
I N DGS ++ LY L
Sbjct: 651 ------------------------------TISSCNYDGSARRVI----LYSTDVLRHPF 676
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
+ + W++WTDW + +G + I ST
Sbjct: 677 SITTFED-----WVYWTDWDKTAVYRANKFNGKDVEAITST 712
>gi|306755365|gb|ADN04911.1| lipophorin receptor protein [Spodoptera litura]
Length = 860
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/318 (37%), Positives = 166/318 (52%), Gaps = 51/318 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L+KVCD DCPN DE C EC G C+ C TP+G C C G L
Sbjct: 303 CIPLSKVCDKHPDCPNFEDEPRDRCGENECAKNNGGCTQRCVDTPVGYYCDCDKGYKLV- 361
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLI--- 119
D+ TC+D++EC PG CSQMC N KG++ C C+ GY + + T CKA + L
Sbjct: 362 DNRTCEDVDECSDPGACSQMCINEKGTFKCECHAGYARDPRDRTRCKATEGHPSLLFARR 421
Query: 120 -----ISNRHSILVADLEEKGK----------------------------DHRAQDIVVS 146
IS H +VA + + D Q VV
Sbjct: 422 FDIRKISLDHHEMVAIVNDTKSATALDYVFRTGMIFWSDVTDEKIYKAPIDEGTQRTVVI 481
Query: 147 GLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
G L+ +GLA DWI H+YW D+ N IE+ D G R +L +D + +PR + L+P G
Sbjct: 482 GDQLITSDGLAVDWIYNHLYWTDTGKNHIELSDLQGNMRKILIRDQLEEPRAIALNPLDG 541
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
W++WTDWG+ P+IER GMDGS+R TI+S + WPNGLTLD+ +RVY+ D+K++ I
Sbjct: 542 --WMYWTDWGQVPKIERAGMDGSHRQTIVSYDVKWPNGLTLDLVRKRVYWVDAKMNMI-- 597
Query: 265 KSLEIKTNVNYSTIFRKL 282
++ NY+ R++
Sbjct: 598 ------SSCNYNGTGRRV 609
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Query: 128 VADLEEKGKD--HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-- 183
V +E G D HR Q IV + GL D + +YW+D+++N I C+ NGT R
Sbjct: 551 VPKIERAGMDGSHR-QTIVSYDVKWPNGLTLDLVRKRVYWVDAKMNMISSCNYNGTGRRV 609
Query: 184 IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST 235
I+ + D + P + + W++WTDW + +G + I T
Sbjct: 610 ILYSTDVLRHPFSI----TTFEDWVYWTDWDKAAVYRANKFNGKDIEAITPT 657
>gi|270016569|gb|EFA13015.1| hypothetical protein TcasGA2_TC001981 [Tribolium castaneum]
Length = 840
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/304 (38%), Positives = 158/304 (51%), Gaps = 55/304 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L++VCD + CP+G DE G C + EC G CS C TP C C G L
Sbjct: 289 CIPLSQVCDKRQHCPDGEDEPVGRCGINECNENNGGCSQRCVDTPSSFYCDCNHGYKLV- 347
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D+ TC+D+NECE PG CSQ+C N KG + C C GY+ + + T CKAI A+ L
Sbjct: 348 DNRTCKDINECEIPGSCSQICINDKGGFKCDCQSGYMRDPRDLTKCKAIEGHASLLFARR 407
Query: 123 RHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------- 151
R D+ + DH +V + LD V
Sbjct: 408 R------DIRKISLDHHEMTSIVNETNSATALDFVFRTGMIFWSDVTDKKIYKAPIDEGN 461
Query: 152 -------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
+GLA DWI HIYW D+ N IE+ + +G R VL KD + +PR +
Sbjct: 462 ERSVVISNDITTSDGLAVDWIYNHIYWTDTGKNTIELANFDGKMRKVLIKDELEEPRALA 521
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
L+P G W+FWTDWG +P+IER GMDGS+R I++ + WPNGLTLD+ +RVY+ D+K
Sbjct: 522 LNPLEG--WMFWTDWGSDPKIERSGMDGSHRQAIVTYDVKWPNGLTLDLVKKRVYWVDAK 579
Query: 259 LDFI 262
L+ I
Sbjct: 580 LNVI 583
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 131 LEEKGKD--HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVL 186
+E G D HR Q IV + GL D + +YW+D++LN I CD NG NR I+
Sbjct: 540 IERSGMDGSHR-QAIVTYDVKWPNGLTLDLVKKRVYWVDAKLNVISSCDYNGRNRRLILF 598
Query: 187 AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ D++ P + + W++WTDW + + GS+ + +T +
Sbjct: 599 SPDSLRHPFSI----TTFEDWVYWTDWDKAAVFKANKFTGSDVQPVTATAM 645
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 13/111 (11%)
Query: 335 TRWLFWTDWGENPRIERIGMD-GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
T +FW+D + +I + +D G+ RS +IS I +GL +D +Y+ D+ + I+
Sbjct: 439 TGMIFWSDVTDK-KIYKAPIDEGNERSVVISNDITTSDGLAVDWIYNHIYWTDTGKNTIE 497
Query: 394 FCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAE 444
N+DG R +V++ D + E ALAL+ G ++++ G++
Sbjct: 498 LANFDGKMR-KVLIKDELEEPR----------ALALNPLEGWMFWTDWGSD 537
>gi|91094773|ref|XP_967944.1| PREDICTED: similar to lipophorin receptor [Tribolium castaneum]
Length = 894
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/304 (38%), Positives = 158/304 (51%), Gaps = 55/304 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L++VCD + CP+G DE G C + EC G CS C TP C C G L
Sbjct: 367 CIPLSQVCDKRQHCPDGEDEPVGRCGINECNENNGGCSQRCVDTPSSFYCDCNHGYKLV- 425
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D+ TC+D+NECE PG CSQ+C N KG + C C GY+ + + T CKAI A+ L
Sbjct: 426 DNRTCKDINECEIPGSCSQICINDKGGFKCDCQSGYMRDPRDLTKCKAIEGHASLLFARR 485
Query: 123 RHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------- 151
R D+ + DH +V + LD V
Sbjct: 486 R------DIRKISLDHHEMTSIVNETNSATALDFVFRTGMIFWSDVTDKKIYKAPIDEGN 539
Query: 152 -------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
+GLA DWI HIYW D+ N IE+ + +G R VL KD + +PR +
Sbjct: 540 ERSVVISNDITTSDGLAVDWIYNHIYWTDTGKNTIELANFDGKMRKVLIKDELEEPRALA 599
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
L+P G W+FWTDWG +P+IER GMDGS+R I++ + WPNGLTLD+ +RVY+ D+K
Sbjct: 600 LNPLEG--WMFWTDWGSDPKIERSGMDGSHRQAIVTYDVKWPNGLTLDLVKKRVYWVDAK 657
Query: 259 LDFI 262
L+ I
Sbjct: 658 LNVI 661
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 131 LEEKGKD--HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVL 186
+E G D HR Q IV + GL D + +YW+D++LN I CD NG NR I+
Sbjct: 618 IERSGMDGSHR-QAIVTYDVKWPNGLTLDLVKKRVYWVDAKLNVISSCDYNGRNRRLILF 676
Query: 187 AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ D++ P + + W++WTDW + + GS+ + +T +
Sbjct: 677 SPDSLRHPFSI----TTFEDWVYWTDWDKAAVFKANKFTGSDVQPVTATAM 723
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 13/111 (11%)
Query: 335 TRWLFWTDWGENPRIERIGMD-GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
T +FW+D + +I + +D G+ RS +IS I +GL +D +Y+ D+ + I+
Sbjct: 517 TGMIFWSDVTDK-KIYKAPIDEGNERSVVISNDITTSDGLAVDWIYNHIYWTDTGKNTIE 575
Query: 394 FCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAE 444
N+DG R +V++ D + E ALAL+ G ++++ G++
Sbjct: 576 LANFDGKMR-KVLIKDELEEPR----------ALALNPLEGWMFWTDWGSD 615
>gi|348533802|ref|XP_003454393.1| PREDICTED: low-density lipoprotein receptor-related protein 4
[Oreochromis niloticus]
Length = 1938
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/419 (31%), Positives = 187/419 (44%), Gaps = 95/419 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ L KVC+ DC +G DE P D C G CS C CTC
Sbjct: 326 RCIGLRKVCNEVNDCGDGTDEHPHHDCRPRSNEGNCNQNNGGCSQKCQMVRGLVQCTCHT 385
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI------ 111
G L +D TCQD++EC + GYCSQ CTNT+G + C C +GY L D +CKA+
Sbjct: 386 GYRLMDDGKTCQDVDECAEEGYCSQGCTNTEGGFQCWCVQGYELRPDKRSCKALGPEPVL 445
Query: 112 -------------NHSAAFLIISNRHSILVADLEEKGK------------------DHRA 140
+ S L+++N + + D +
Sbjct: 446 LFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHSRELVFWSDVTLDRIMKANLNGSNV 505
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+++V +GL+ GLA DWI +YW DS +RIEV + +GT+R VL N+ +PR + L
Sbjct: 506 EEVVSTGLESPGGLAIDWIHDKLYWTDSGTSRIEVANLDGTHRKVLIWQNMEKPRAIALH 565
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G ++WTDWG PRIE MDGSNR I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 566 PIEGK--IYWTDWGNTPRIEYSNMDGSNRRVIADTHLFWPNGLTIDYAGRRMYWVDAKHH 623
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
I+ +A++DG N ++S L A+
Sbjct: 624 VIE----------------------------------RADLDGRNRKAVISQGLPHPFAI 649
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ LY WTDW G N+ II K+++P +DI T
Sbjct: 650 TVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 692
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 160/352 (45%), Gaps = 87/352 (24%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
+C + G C++ C P P G C CP G +L D +C D E +Y
Sbjct: 1315 KCGRRNGGCTHLCLPRPNGTSCACPTGILLKGDGRSCDDSPE----------------TY 1358
Query: 92 ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEE-KGK-------------- 136
+ N V + +H+ + + H+++ D + GK
Sbjct: 1359 LLFSNRVSVRRI---SLDTNDHTDVHVPVLELHNVISLDYDSVDGKLYYTDVTLDVIRRT 1415
Query: 137 --DHRAQDIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
D + V+S GL +GLA DW+ ++YW D+ N IEV +GT+R VL +++ +
Sbjct: 1416 NLDGSGMETVISQGLKTTDGLAVDWVARNMYWTDTGRNTIEVARLDGTSRKVLVNNSLDE 1475
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
PR + + PS G +LFWTDWG +IER +DGS+R +I+T + WPNGLTLD TRR++
Sbjct: 1476 PRAIAVFPSKG--FLFWTDWGHIAKIERSHLDGSDRKVLINTDLGWPNGLTLDYDTRRIF 1533
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+ D+ LD +I ++++G +LVS
Sbjct: 1534 WVDAHLD----------------------------------RIESSDLNGKLRQVLVS-P 1558
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD-GSNRSTIIS 364
+ AL ++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1559 VSHPFALTQQD-----------RWIYWTDW-QTKSIQRVDKHTGRNKETVLA 1598
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 143/326 (43%), Gaps = 91/326 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI--LVADLEEKG 135
G CS +C + +Y C+C G+ + D+++C FL+ + R I + D E+
Sbjct: 710 GGCSHLCLPSNKTYTCACPTGFK-KVDSYSCAT--GLDKFLLFARRTDIRRISFDTEDMS 766
Query: 136 KD--------------------------------HRA------QDIVV-SGLDLVEGLAY 156
D +RA Q++VV + L+ GLA
Sbjct: 767 DDVIPLADVRNAVALDWDSKDGYIYWTDVTTDSINRALWNGTKQEMVVETSLESPAGLAI 826
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + NG+ R VL +N+ +PR +++DP G +++WTDWG N
Sbjct: 827 DWVTNKLYWTDAGTDRIEVSNANGSMRTVLIWENLDRPRDIVVDPIGG--FMYWTDWGAN 884
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD SNR IIS+ + WPNGL +D T+R+Y+AD+ + I+
Sbjct: 885 PKIERAGMDASNRIVIISSNLTWPNGLAIDYETKRLYWADAGMKTIE------------- 931
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
N DGS+ +L+ QL L + LY
Sbjct: 932 ---------------------YGNFDGSDRQVLIGTQLPHPFGLTVHEDKLY-------- 962
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G R T+
Sbjct: 963 ---WTDWQSKSIQSADKLTGLGRHTL 985
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 185/428 (43%), Gaps = 64/428 (14%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C G CS+ C P P + C CP G L D TC PG S + +
Sbjct: 1009 CAVNNGGCSHLCLLAPAPKASSCACPTGINLQTDGKTCT-------PGMSSFLIFARRTD 1061
Query: 91 Y-ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRA-------QD 142
+ S + Y + + ++ A + + +D K K RA +D
Sbjct: 1062 IRMVSLDIPYYADVVLAINSTMKNTIAIGVDPKEGKVYWSDSTLK-KISRASINGIAHED 1120
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ +GL +GLA D +G IYW D+ NRIEV + +G+ R VL N+ PR + L
Sbjct: 1121 IISTGLMTTDGLAVDAVGRKIYWTDTGTNRIEVANLDGSMRKVLVWQNLDSPRAIALYHE 1180
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWGE+ ++ER MDGS+R +IS + WPNGL +D+A ++ +AD+ + I
Sbjct: 1181 MG--YMYWTDWGEHAKLERSAMDGSDRVVLISNNLGWPNGLAIDMAGSQLLWADAHTERI 1238
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGV------PLKIGKANMDGSNASILVSGQ--- 313
+ L + T + Y + G+ + I +A+ + + +I V
Sbjct: 1239 EASDLNGQNRRTLVTPVQHPYGLTLLGSHIYWTDWQSRSIQRADKNSGSNTITVRANLPG 1298
Query: 314 LYEALALDLENGMLYY-------------------STLKCTRWLFWTDWG----ENPR-- 348
L + A+D E + + ++ C + G ++P
Sbjct: 1299 LMDIQAVDREKPLGFNKCGRRNGGCTHLCLPRPNGTSCACPTGILLKGDGRSCDDSPETY 1358
Query: 349 --------IERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVYFADSKLDFIDFCNYD 398
+ RI +D ++ + + + N ++LD + ++Y+ D LD I N D
Sbjct: 1359 LLFSNRVSVRRISLDTNDHTDVHVPVLELHNVISLDYDSVDGKLYYTDVTLDVIRRTNLD 1418
Query: 399 GTGRQQVI 406
G+G + VI
Sbjct: 1419 GSGMETVI 1426
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 157/359 (43%), Gaps = 84/359 (23%)
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
AI+ + + L+ ++ H+ + + G++ R +V+ + GL +G HIYW D +
Sbjct: 1220 AIDMAGSQLLWADAHTERIEASDLNGQNRRT---LVTPVQHPYGLTL--LGSHIYWTDWQ 1274
Query: 170 LNRIEVCDEN-------------------------------------GTNRIVLAKDNIT 192
I+ D+N G + L + N T
Sbjct: 1275 SRSIQRADKNSGSNTITVRANLPGLMDIQAVDREKPLGFNKCGRRNGGCTHLCLPRPNGT 1334
Query: 193 Q---PRGMML-------DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 242
P G++L D SP T LF + RI +D ++ + + + N
Sbjct: 1335 SCACPTGILLKGDGRSCDDSPETYLLF----SNRVSVRRISLDTNDHTDVHVPVLELHNV 1390
Query: 243 LTLDIAT--RRVYFADSKLDFI-----DCKSLEIKTNVNYST--------IFRKLYWIDE 287
++LD + ++Y+ D LD I D +E + T + R +YW D
Sbjct: 1391 ISLDYDSVDGKLYYTDVTLDVIRRTNLDGSGMETVISQGLKTTDGLAVDWVARNMYWTDT 1450
Query: 288 GGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
G N + + A +DG++ +LV+ L E A+ + +LFWTDWG
Sbjct: 1451 GRNTIEV----ARLDGTSRKVLVNNSLDEPRAI---------AVFPSKGFLFWTDWGHIA 1497
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IER +DGS+R +I+T + WPNGLTLD TRR+++ D+ LD I+ + +G RQ ++
Sbjct: 1498 KIERSHLDGSDRKVLINTDLGWPNGLTLDYDTRRIFWVDAHLDRIESSDLNGKLRQVLV 1556
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 95/180 (52%), Gaps = 19/180 (10%)
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI 296
IYW + T I R + +K + + SLE + + KLYW D G + +I
Sbjct: 790 IYWTDVTTDSI--NRALWNGTKQEMVVETSLESPAGLAIDWVTNKLYWTDAGTD----RI 843
Query: 297 GKANMDGSNASILVSGQLYEA--LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+N +GS ++L+ L + +D G +Y WTDWG NP+IER GM
Sbjct: 844 EVSNANGSMRTVLIWENLDRPRDIVVDPIGGFMY-----------WTDWGANPKIERAGM 892
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
D SNR IIS+ + WPNGL +D T+R+Y+AD+ + I++ N+DG+ RQ +I L F
Sbjct: 893 DASNRIVIISSNLTWPNGLAIDYETKRLYWADAGMKTIEYGNFDGSDRQVLIGTQLPHPF 952
>gi|162462084|ref|NP_001104810.1| lipophorin receptor isoform 3 precursor [Bombyx mori]
gi|84469400|dbj|BAE71408.1| lipophorin receptor [Bombyx mori]
Length = 882
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/401 (33%), Positives = 186/401 (46%), Gaps = 86/401 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L KVCD DCPN DE C EC+ G CS C TP+ C C G L
Sbjct: 355 CIPLAKVCDKHVDCPNFEDEPRDRCGENECEKNNGGCSQRCVDTPIAYYCDCEKGYKLI- 413
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLI--- 119
D+ TC+D++EC PG CSQ+C N KG++ C C+ GY + + T CKA + L
Sbjct: 414 DNRTCEDIDECADPGSCSQICINEKGTFKCECHTGYARDPRDRTRCKATEGHPSLLFARK 473
Query: 120 -----ISNRHSILVADLEEKGK----------------------------DHRAQDIVVS 146
IS H +VA + + D Q VV
Sbjct: 474 HDIRKISLDHHEMVAIVNDTKSATALDYVFRTGMIFWSDVNDEKIYKAPIDEGTQRTVVI 533
Query: 147 GLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
G L+ +GLA DW+ H+YW D+ N IE+ D G R +L +D + +PR + L+P G
Sbjct: 534 GEQLITSDGLAVDWVYNHLYWTDTGHNHIELSDLQGNMRKILIRDRLEEPRAIALNPLEG 593
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
W+FWTDWG+ P+IER GMDGS+RSTI+S + WPNGLTLD+ +RVY+ D+K++ I
Sbjct: 594 --WMFWTDWGQVPKIERAGMDGSHRSTIVSYDVKWPNGLTLDLVRQRVYWVDAKMNTI-- 649
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
++ NY R+L IL S ++
Sbjct: 650 ------SSCNYDGSGRRL-------------------------ILHSTEVLRHP------ 672
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
+S W++WTDW + +G + I ST
Sbjct: 673 ----FSITTFEDWVYWTDWDKTAVYRANKFNGKDVEAITST 709
>gi|195177870|ref|XP_002028957.1| GL15420 [Drosophila persimilis]
gi|194108912|gb|EDW30955.1| GL15420 [Drosophila persimilis]
Length = 253
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/135 (69%), Positives = 108/135 (80%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V++RCVN+T VCD DCPNGADEG GCDLAEC+H+ G CS+ C TP GALC CPPG
Sbjct: 101 VSERCVNITSVCDDTPDCPNGADEGEGCDLAECEHQTGQCSSFCQKTPNGALCVCPPGSE 160
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
+ D TC D NEC+ PG CSQ CTNTKGSY CSC +GYVLE + HTCKA+NH+AAFLII
Sbjct: 161 IGEDGFTCIDTNECDPPGLCSQQCTNTKGSYFCSCQDGYVLEPNKHTCKAVNHTAAFLII 220
Query: 121 SNRHSILVADLEEKG 135
SNRHSILVADL+E+G
Sbjct: 221 SNRHSILVADLKEQG 235
>gi|301625410|ref|XP_002941898.1| PREDICTED: low-density lipoprotein receptor-related protein 4,
partial [Xenopus (Silurana) tropicalis]
Length = 1828
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/420 (31%), Positives = 195/420 (46%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC +G+DE P + C H+ G C C CTC
Sbjct: 253 RCIGQRKLCNGVNDCGDGSDESPHQNCRPRTGEENCNHQNGGCEQKCQTVRGLVQCTCQT 312
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L +D TCQD++EC + GYCSQ C+N++G + C C GY L D +CKA+
Sbjct: 313 GYRLRDDGRTCQDVDECAEEGYCSQGCSNSQGGFQCWCEAGYQLRPDKRSCKALG-PEPV 371
Query: 118 LIISNR------------HSILVADLEEK-----GKDHR--------------------- 139
L+ +NR +++L+ +LE +H
Sbjct: 372 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHEHELVFWSDVTLDRIMRANLNGSN 431
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DWI ++W DS +RIEV + +G++R VL +N+ +PR + L
Sbjct: 432 VEEVVSTGLESPGGLAIDWIHDKLFWTDSGTSRIEVSNLDGSHRKVLLWNNLEKPRAIAL 491
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGSNR I T ++WPNGLT+D A R+Y+ D+K
Sbjct: 492 HPMEGT--IYWTDWGNVPRIEYSSMDGSNRRVIADTHLFWPNGLTIDYAGHRIYWVDAKH 549
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +A++DGSN ++S L A
Sbjct: 550 HVIE----------------------------------RADLDGSNRKAVISQGLPHPFA 575
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ +I +K+++P +DI T
Sbjct: 576 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-VIRSKLHFP----MDIHT 619
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 151/330 (45%), Gaps = 69/330 (20%)
Query: 44 CHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNTKGSY-----ICS 94
C P C CP G L +D TC + G ++ +T+ I
Sbjct: 1254 CLPNSTSFSCACPTGIQLKDDGKTCNPSPDTYLLFSSRGSIRRISLDTEDHTDVYVPIPE 1313
Query: 95 CNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGL 154
+ L+YD+ K I ++ FL + R + +E ++ GL +GL
Sbjct: 1314 LHNVISLDYDSVEGK-IYYTDVFLDVIRRSDLTGTGMET---------VIGEGLKTTDGL 1363
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DW+ ++YW D+ N IEV +G +R VL +++ +PR + + P G +LFWTDWG
Sbjct: 1364 AVDWVARNLYWTDTGRNTIEVSRLDGRHRKVLVNNSLDEPRAIAVFPRKG--FLFWTDWG 1421
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
+ +IER +DGS+R TII+T + WPNGLTLD +RR+Y+ D+ LD
Sbjct: 1422 QVAKIERAHLDGSDRRTIINTDLGWPNGLTLDYDSRRIYWVDAHLD-------------- 1467
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
+I A+++G +L+S Q+ AL E
Sbjct: 1468 --------------------RIENADLNGKMRHVLIS-QVSHPFALTQEG---------- 1496
Query: 335 TRWLFWTDWGENPRIERI-GMDGSNRSTII 363
RW++WTDW + I+R+ G N+ T++
Sbjct: 1497 -RWIYWTDW-QTKSIQRVDKFSGRNKETVL 1524
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 88/132 (66%), Gaps = 3/132 (2%)
Query: 137 DHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D Q++++ + L+ GLA DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR
Sbjct: 733 DGSEQEVIIDTSLESPAGLAIDWVTHKLYWTDAGTDRIEVSNTDGSLRSVLIWENLDRPR 792
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+++DP G +++WTDWG NP+IER GMD S+R IIS+ + WPNGL +D + R+Y+A
Sbjct: 793 DIVVDPIGG--FMYWTDWGANPKIERAGMDASSRLVIISSNLTWPNGLAIDYESERLYWA 850
Query: 256 DSKLDFIDCKSL 267
D+ + I+ L
Sbjct: 851 DAGMKTIESAKL 862
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 177/428 (41%), Gaps = 60/428 (14%)
Query: 31 AECKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQD-MNECEQPGYCSQM-CTN 86
+ C G CS+ C P P G C CP G L +D TC M+ + + +
Sbjct: 934 SACSIDNGGCSHICLLAPKPKGHSCACPTGVNLLSDGRTCSSGMDRFLIFARRTDIRSVS 993
Query: 87 TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVS 146
Y N ++ + ++ ++ G +H QDI+ +
Sbjct: 994 LDIPYFADVVVPINATMKNTIAVGVDPLKGLIYWADSTLRKISRAALDGSNH--QDIITT 1051
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTR 206
GL +GLA D IG +YW D+ NRIEV + +GT R VL N+ PR + L G
Sbjct: 1052 GLVTTDGLAVDAIGRKLYWTDTGTNRIEVANLDGTMRKVLVWQNLGSPRAIALYHEMG-- 1109
Query: 207 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKS 266
+++W+DWGEN ++ER GMDGS R +IS + WPNGL +D A ++ +AD+ + I+
Sbjct: 1110 YMYWSDWGENAKLERAGMDGSERMVLISLNLGWPNGLAVDKAGSQLLWADAHTERIEASD 1169
Query: 267 L----------EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ--- 313
L ++ + + +YW D I +A+ D I+V
Sbjct: 1170 LMGRNRRILVSPVQHPYGLTLLDAHIYWTDWQTR----SIQRADKDTGGNIIVVRDNLPG 1225
Query: 314 LYEALALDLENGMLYYS-------------------TLKCTRWLFWTDWGE--NP----- 347
L + A+D + + Y + C + D G+ NP
Sbjct: 1226 LMDIQAVDRTHALGYSXXXXXXXXXXHLCLPNSTSFSCACPTGIQLKDDGKTCNPSPDTY 1285
Query: 348 -------RIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVYFADSKLDFIDFCNYD 398
I RI +D + + + N ++LD + ++Y+ D LD I +
Sbjct: 1286 LLFSSRGSIRRISLDTEDHTDVYVPIPELHNVISLDYDSVEGKIYYTDVFLDVIRRSDLT 1345
Query: 399 GTGRQQVI 406
GTG + VI
Sbjct: 1346 GTGMETVI 1353
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 158/361 (43%), Gaps = 86/361 (23%)
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
A++ + + L+ ++ H+ + + G++ R I+VS + GL + HIYW D +
Sbjct: 1147 AVDKAGSQLLWADAHTERIEASDLMGRNRR---ILVSPVQHPYGLTL--LDAHIYWTDWQ 1201
Query: 170 LNRIEVCDENGTNRIVLAKDNITQ------------------------------------ 193
I+ D++ I++ +DN+
Sbjct: 1202 TRSIQRADKDTGGNIIVVRDNLPGLMDIQAVDRTHALGYSXXXXXXXXXXHLCLPNSTSF 1261
Query: 194 ----PRGMML-------DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 242
P G+ L +PSP T LF I RI +D + + + N
Sbjct: 1262 SCACPTGIQLKDDGKTCNPSPDTYLLF----SSRGSIRRISLDTEDHTDVYVPIPELHNV 1317
Query: 243 LTLDIAT--RRVYFADSKLDFIDCKSLE-----------IKTNVNYST--IFRKLYWIDE 287
++LD + ++Y+ D LD I L +KT + + R LYW D
Sbjct: 1318 ISLDYDSVEGKIYYTDVFLDVIRRSDLTGTGMETVIGEGLKTTDGLAVDWVARNLYWTDT 1377
Query: 288 GGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
G N + + + +DG + +LV+ L E A+ + +LFWTDWG+
Sbjct: 1378 GRNTIEV----SRLDGRHRKVLVNNSLDEPRAI---------AVFPRKGFLFWTDWGQVA 1424
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+IER +DGS+R TII+T + WPNGLTLD +RR+Y+ D+ LD I+ N D G+ + +L
Sbjct: 1425 KIERAHLDGSDRRTIINTDLGWPNGLTLDYDSRRIYWVDAHLDRIE--NADLNGKMRHVL 1482
Query: 408 I 408
I
Sbjct: 1483 I 1483
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 98/217 (45%), Gaps = 48/217 (22%)
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
++WTD + I R DGS + II T + P GL +D T
Sbjct: 717 MYWTDITTDS-INRAKWDGSEQEVIIDTSLESPAGLAIDWVTH----------------- 758
Query: 268 EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA--LALDLENG 325
KLYW D G + +I +N DGS S+L+ L + +D G
Sbjct: 759 -------------KLYWTDAGTD----RIEVSNTDGSLRSVLIWENLDRPRDIVVDPIGG 801
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
+Y WTDWG NP+IER GMD S+R IIS+ + WPNGL +D + R+Y+A
Sbjct: 802 FMY-----------WTDWGANPKIERAGMDASSRLVIISSNLTWPNGLAIDYESERLYWA 850
Query: 386 DSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
D+ + I+ +G R +I DL F L GD
Sbjct: 851 DAGMKTIESAKLNGADRMVLIGTDLPHPFGLTLYGDQ 887
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 132/337 (39%), Gaps = 104/337 (30%)
Query: 78 GYCSQMC---TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK 134
G CS +C KG + C+C G L D TC + FLI + R I L+
Sbjct: 941 GGCSHICLLAPKPKG-HSCACPTGVNLLSDGRTCSS--GMDRFLIFARRTDIRSVSLDIP 997
Query: 135 GKDHRAQDIVV---SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI 191
D+VV + + + D + G IYW DS L +
Sbjct: 998 ----YFADVVVPINATMKNTIAVGVDPLKGLIYWADSTLRK------------------- 1034
Query: 192 TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
I R +DGSN II+T + +GL +D R+
Sbjct: 1035 ---------------------------ISRAALDGSNHQDIITTGLVTTDGLAVDAIGRK 1067
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
LYW D G N +I AN+DG+ +LV
Sbjct: 1068 ------------------------------LYWTDTGTN----RIEVANLDGTMRKVLVW 1093
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
L A+ L + M Y ++W+DWGEN ++ER GMDGS R +IS + WPN
Sbjct: 1094 QNLGSPRAIALYHEMGY---------MYWSDWGENAKLERAGMDGSERMVLISLNLGWPN 1144
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
GL +D A ++ +AD+ + I+ D GR + IL+
Sbjct: 1145 GLAVDKAGSQLLWADAHTERIEA--SDLMGRNRRILV 1179
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 131 LEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D ++ +++S L GLA D+ +YW D+ + IE NG +R+VL
Sbjct: 814 IERAGMDASSRLVIISSNLTWPNGLAIDYESERLYWADAGMKTIESAKLNGADRMVLIGT 873
Query: 190 NITQPRGMMLDPSPGTRWLFWTDW 213
++ P G+ L ++WTDW
Sbjct: 874 DLPHPFGLTLYGDQ----IYWTDW 893
>gi|139002291|dbj|BAF51965.1| lipophorin receptor [Bombyx mori]
Length = 891
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/401 (33%), Positives = 187/401 (46%), Gaps = 86/401 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L+KVCD DCPN DE C EC+ G CS C TP+G C C G L
Sbjct: 337 CIPLSKVCDKHVDCPNFEDEPRDRCGENECEKNNGGCSQRCVDTPIGYYCDCEKGYKLI- 395
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLI--- 119
D+ TC+D+ EC PG CSQ+C N KG++ C C+ GY + + T CKA + L
Sbjct: 396 DNRTCEDIGECADPGSCSQICINEKGTFKCECHTGYARDPRDRTRCKATEGHPSLLFARK 455
Query: 120 -----ISNRHSILVADLEEKGK----------------------------DHRAQDIVVS 146
IS H +VA + + D Q VV
Sbjct: 456 HDIRKISLDHHEMVAIVNDTKSATALDYVFRTGMIFWSDVNDEKIYKAPIDEGTQRTVVI 515
Query: 147 GLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
G L+ +GLA DW+ H+YW D+ N IE+ D G R +L +D + +PR + L+P G
Sbjct: 516 GEQLITSDGLAVDWVYNHLYWTDTGHNHIELSDLQGNMRKILIRDRLEEPRAIALNPLEG 575
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
W++WTDWG+ P+IER GMDGS+RSTI+S + WPNGLTLD+ +RVY+ D+K++ I
Sbjct: 576 --WMYWTDWGKVPKIERAGMDGSHRSTIVSYDVKWPNGLTLDLVRQRVYWVDAKMNTI-- 631
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
++ NY R+L IL S ++
Sbjct: 632 ------SSCNYDGSGRRL-------------------------ILHSTEVLRHP------ 654
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
+S W++WTDW + +G + I ST
Sbjct: 655 ----FSITTFEDWVYWTDWDKTAVYRANKFNGKDVEAITST 691
>gi|195453850|ref|XP_002073972.1| GK14390 [Drosophila willistoni]
gi|194170057|gb|EDW84958.1| GK14390 [Drosophila willistoni]
Length = 1102
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/305 (37%), Positives = 163/305 (53%), Gaps = 54/305 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ L+KVCD + DCP+G DE G C + EC K G C + C +G C C G LS
Sbjct: 568 QCIALSKVCDKRKDCPDGEDEPAGKCGVNECSTKNGNCMHRCVDLAVGHRCECNEGYKLS 627
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
+D +C D+NECE PG CSQ+C N G + C C GY+ + NHT CKA + A L+++
Sbjct: 628 SDKRSCVDINECENPGMCSQICINEIGGFKCECEAGYMRDPRNHTRCKA-SEGHASLLLA 686
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 687 RRH-----DIRKIALDHMEMTSIVNSTKSATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 741
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + +G VL +D++ PR +
Sbjct: 742 QEKTVVLKQSSVTSDGLAVDWIYNHVYYTDTHKCTIELTNFDGNMGKVLIEDSLDIPRSI 801
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TII+ + WPNG+TLD+ +R+Y+ D
Sbjct: 802 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIINYDVKWPNGITLDLVRKRIYWVDG 859
Query: 258 KLDFI 262
KL+ I
Sbjct: 860 KLNII 864
>gi|195054555|ref|XP_001994190.1| GH23433 [Drosophila grimshawi]
gi|193896060|gb|EDV94926.1| GH23433 [Drosophila grimshawi]
Length = 1030
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 176/342 (51%), Gaps = 67/342 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ L+KVCD + DCP+G DE G C EC K G C + C +G C C G LS
Sbjct: 446 QCIPLSKVCDKRKDCPDGEDEPAGKCGQNECAIKNGNCMHRCVDHLVGYSCDCHQGYKLS 505
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D+ TC D+NECEQPG CSQ+C N G + C C GY+ + NHT CKA A+ L+++
Sbjct: 506 GDNRTCLDVNECEQPGVCSQICVNEVGGFKCECEAGYMRDPRNHTRCKATEGHAS-LLLA 564
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 565 RRH-----DIRKIALDHMEMTSIVNNTKSATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 619
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + +G VL +D++ PR +
Sbjct: 620 NEKTVVLKQSSVTSDGLAVDWIYNHVYYTDTHKCTIELTNFDGNMGKVLIEDSLDIPRSI 679
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TII+ + WPNG+TLD+ +R+Y+ D
Sbjct: 680 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIINYDVKWPNGITLDLVRKRIYWVDG 737
Query: 258 KLDFIDCKSLE--IKTNVNYSTIFRK-----------LYWID 286
KL+ I + + + + YST + + +YW D
Sbjct: 738 KLNVISSANYDGSQRRQILYSTEYLRHPFSISTFEDYIYWTD 779
>gi|47230767|emb|CAF99960.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1782
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 133/419 (31%), Positives = 186/419 (44%), Gaps = 95/419 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ KVC+ DC +G DE P D C G CS C CTC
Sbjct: 137 RCIGQRKVCNEVNDCGDGTDEQPHHDCRPRSSEGNCNQNNGGCSQKCQMVRGLVQCTCHT 196
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI------ 111
G L +D CQD++EC + GYCSQ CTNT+G++ C C +GY L D +CKA+
Sbjct: 197 GYRLMDDGKACQDVDECAEEGYCSQGCTNTEGAFQCWCVQGYELRPDKRSCKALGPEPVL 256
Query: 112 -------------NHSAAFLIISNRHSILVADLEEKGK------------------DHRA 140
+ S L+++N + + D +
Sbjct: 257 LFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHSQELVFWSDVTLDRIMKANLNGSNV 316
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+++V +GL+ GLA DWI +YW DS +RIEV + +GT+R VL N+ +PR + L
Sbjct: 317 EEVVSTGLESPGGLAIDWIHDKLYWTDSGTSRIEVANLDGTHRKVLLWQNMEKPRAIALH 376
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G ++WTDWG PRIE MDGSNR I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 377 PIEGK--IYWTDWGNTPRIEYANMDGSNRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHH 434
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
I+ KA++DG N ++S L A+
Sbjct: 435 VIE----------------------------------KADLDGRNRKAVISHGLPHPFAI 460
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ LY WTDW G N+ II K+++P +DI T
Sbjct: 461 TVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 503
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 170/364 (46%), Gaps = 66/364 (18%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
+C + G C++ C P P G C CP G +L D +C D E +Y
Sbjct: 1132 KCGRRNGGCTHLCLPRPNGTSCACPTGILLKGDGRSCDDSPE----------------TY 1175
Query: 92 ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEE-KGK-------------- 136
+ N V + +H+ + + H+++ D + GK
Sbjct: 1176 LLFSNRISVRRI---SLDTNDHTDVHVPVPELHNVISLDYDSVDGKLYYTDVTLDVIRRA 1232
Query: 137 --DHRAQDIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
D + V+S GL +GLA DW+ ++YW D+ N IEV +GT R VL +++ +
Sbjct: 1233 NLDGSGMETVISQGLKTTDGLAVDWVARNMYWTDTGRNTIEVARLDGTGRKVLINNSLDE 1292
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
PR + + PS G +LF DWG +IER +DGS+R +I+T + WPNGLTLD TRR
Sbjct: 1293 PRAIAVFPSKG--FLFLIDWGHIAKIERSHLDGSDRKVLINTDLGWPNGLTLDYDTRRSE 1350
Query: 254 FADSKLDFIDCKSLEIKTN-----------VNYSTIFRKLYWIDEGGNGVPLKIGKANMD 302
+ + + + + V S +F +++W+D A++D
Sbjct: 1351 TENVSATVVSMVGVNGQNDKHLRQWLPCERVPGSDVFCRIFWVD------------AHLD 1398
Query: 303 GSNASILVSGQLYEALALDLENGMLYYSTL-KCTRWLFWTDWGENPRIERIGMD-GSNRS 360
+S L +G+L + L+ + + + +S L + RW++WTDW + I+R+ G N+
Sbjct: 1399 RIESSDL-NGKLRQILSKPVSSPLTPFSRLSQQDRWIYWTDW-QTKSIQRVDKHTGRNKE 1456
Query: 361 TIIS 364
T+++
Sbjct: 1457 TVLA 1460
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 142/326 (43%), Gaps = 91/326 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI--LVADLEEKG 135
G CS +C + +Y C+C G+ + D+H C + FL+ + R I + D E+
Sbjct: 522 GGCSHLCLPSNKTYTCACPTGFK-KVDHHNCA--DGLDKFLLFARRTDIRRISFDTEDMS 578
Query: 136 KD--------------------------------HRA------QDIVV-SGLDLVEGLAY 156
D +RA Q++VV + L+ GLA
Sbjct: 579 DDVIPLADVRNAVALDWDAKDGYIYWTDVTTDSINRALWNGTQQEVVVDTSLESPAGLAI 638
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR +++DP G +++WTDWG N
Sbjct: 639 DWVTSKLYWTDAGTDRIEVSNADGSMRTVLIWENLDRPRDIVVDPIGG--FMYWTDWGAN 696
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD S+R IIS+ + WPNGL +D T+R+Y+AD+ + ++
Sbjct: 697 PKIERAGMDASSRVVIISSNLTWPNGLAIDYDTKRLYWADAGMKTVE------------- 743
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
N DGS +L+ QL L + LY
Sbjct: 744 ---------------------YGNFDGSGRQVLIGSQLPHPFGLTVHEDKLY-------- 774
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G R T+
Sbjct: 775 ---WTDWQSKSIQSADKLTGLGRQTL 797
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 181/428 (42%), Gaps = 69/428 (16%)
Query: 38 GLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYC----SQMCTNTKGSY 91
G CS+ C P P + C CP G L D TC PG S + +
Sbjct: 826 GGCSHLCLLAPAPKASSCACPTGINLQTDGKTCT-------PGVTFTGMSSFLIFARRTD 878
Query: 92 I--CSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRA-------QD 142
I S + Y + ++ ++ A + + +D K K RA +D
Sbjct: 879 IRMVSLDIPYFADVVLAVNTSMKNTIAIGVDPKEGKVYWSDSTLK-KISRASISGKAQED 937
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
IV +GL +GLA D +G IYW D+ NRIEV + +G+ R +L N+ PR + L
Sbjct: 938 IVSTGLMTTDGLAVDAVGRKIYWTDTGTNRIEVANLDGSMRKILVWQNLDSPRAIALYNE 997
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+WTDWGE+ ++ER MDGS R +IS + WPNGL +D A ++ +AD+ + I
Sbjct: 998 MG--YLYWTDWGEHAKLERSAMDGSGRVVLISNNLGWPNGLAIDTAGSQLLWADAHTERI 1055
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGV------PLKIGKANMDGSNASILVSGQ--- 313
+ L + T + Y + G+ + I +A+ +I V
Sbjct: 1056 EAADLNGQNRRTLVTPVQHPYGLTLLGSHIYWTDWQSRSIQRADKTTGTNTITVRSNLPG 1115
Query: 314 LYEALALDLENGMLYY-------------------STLKCTRWLFWTDWG----ENPR-- 348
L + A+D+E + + ++ C + G ++P
Sbjct: 1116 LMDIQAVDMERPLGFNKCGRRNGGCTHLCLPRPNGTSCACPTGILLKGDGRSCDDSPETY 1175
Query: 349 --------IERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVYFADSKLDFIDFCNYD 398
+ RI +D ++ + + N ++LD + ++Y+ D LD I N D
Sbjct: 1176 LLFSNRISVRRISLDTNDHTDVHVPVPELHNVISLDYDSVDGKLYYTDVTLDVIRRANLD 1235
Query: 399 GTGRQQVI 406
G+G + VI
Sbjct: 1236 GSGMETVI 1243
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 146/360 (40%), Gaps = 88/360 (24%)
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
AI+ + + L+ ++ H+ + + G++ R +V+ + GL +G HIYW D +
Sbjct: 1037 AIDTAGSQLLWADAHTERIEAADLNGQNRRT---LVTPVQHPYGLTL--LGSHIYWTDWQ 1091
Query: 170 LNRIEVCDEN-GTNRIV------------------------------------LAKDNIT 192
I+ D+ GTN I L + N T
Sbjct: 1092 SRSIQRADKTTGTNTITVRSNLPGLMDIQAVDMERPLGFNKCGRRNGGCTHLCLPRPNGT 1151
Query: 193 Q---PRGMML-------DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI---------- 232
P G++L D SP T LF + RI +D ++ + +
Sbjct: 1152 SCACPTGILLKGDGRSCDDSPETYLLF----SNRISVRRISLDTNDHTDVHVPVPELHNV 1207
Query: 233 -------ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
+ K+Y+ + +TLD+ RR S ++ + + L+ + + R +YW
Sbjct: 1208 ISLDYDSVDGKLYYTD-VTLDV-IRRANLDGSGMETVISQGLKTTDGLAVDWVARNMYWT 1265
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
D G N + + A +DG+ +L++ L E A+ + +LF DWG
Sbjct: 1266 DTGRNTIEV----ARLDGTGRKVLINNSLDEPRAI---------AVFPSKGFLFLIDWGH 1312
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+IER +DGS+R +I+T + WPNGLTLD TRR + + +G + +
Sbjct: 1313 IAKIERSHLDGSDRKVLINTDLGWPNGLTLDYDTRRSETENVSATVVSMVGVNGQNDKHL 1372
>gi|194743774|ref|XP_001954375.1| GF18235 [Drosophila ananassae]
gi|190627412|gb|EDV42936.1| GF18235 [Drosophila ananassae]
Length = 1068
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 122/337 (36%), Positives = 173/337 (51%), Gaps = 57/337 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ L KVCD + DCPNG DE G C + EC G C +TC +G C C G L+
Sbjct: 534 QCIPLAKVCDRRKDCPNGEDEPAGKCSVNECATANGGCMHTCVNLAVGYRCECHAGYKLA 593
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D+ +C D++ECE PG CSQ C N GS+ C C EGY+ NHT CKA + A L+++
Sbjct: 594 PDNRSCVDIDECETPGVCSQQCINQVGSFKCECQEGYMRVMHNHTRCKA-SEGHASLLLT 652
Query: 122 NRHSILVADLEE--------KGKDHRAQDIVV-----------------SGLD------- 149
RH I L+ K A D V S +D
Sbjct: 653 RRHDIRKIALDRPEMTSIVNSTKSSTALDFVFRTGMIFWSDVTTKSIYKSPIDEGNEKTL 712
Query: 150 -------LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+GLA DWI H+Y+ D+ IE+ + G+ VL +D++ PR + LDP
Sbjct: 713 VVKHSSVTSDGLAVDWIYNHVYYTDTHKCTIELTNFEGSMGKVLVEDSVDIPRSIALDPI 772
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G W++W+DWG +PRIER GMDGS+R+ II+ + WPNG+TLD+ +R+Y+ D KL+ I
Sbjct: 773 DG--WMYWSDWGASPRIERAGMDGSHRTAIITYDVKWPNGITLDLVLKRIYWVDGKLNII 830
Query: 263 DCKSLE--IKTNVNYSTIFRK-----------LYWID 286
+ + + V YS+ + + +YW D
Sbjct: 831 SSANFDGSQRRQVLYSSEYLRHPFSITTFEDHVYWTD 867
>gi|195453846|ref|XP_002073970.1| GK14389 [Drosophila willistoni]
gi|194170055|gb|EDW84956.1| GK14389 [Drosophila willistoni]
Length = 1077
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/305 (37%), Positives = 163/305 (53%), Gaps = 54/305 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ L+KVCD + DCP+G DE G C + EC K G C + C +G C C G LS
Sbjct: 486 QCIALSKVCDKRKDCPDGEDEPAGKCGVNECATKNGNCMHKCLDLAVGHRCECHEGYKLS 545
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
+D +C D+NECE PG CSQ+C N G + C C GY+ + NHT CKA + A L+++
Sbjct: 546 SDKRSCVDINECENPGMCSQICINEIGGFKCECEAGYMRDPRNHTRCKA-SEGHASLLLA 604
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 605 RRH-----DIRKIALDHMEMTSIVNSTKSATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 659
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + +G VL +D++ PR +
Sbjct: 660 QEKTVVLKQSSVTSDGLAVDWIYNHVYYTDTHKCTIELTNFDGNMGKVLIEDSLDIPRSI 719
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TII+ + WPNG+TLD+ +R+Y+ D
Sbjct: 720 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIINYDVKWPNGITLDLVRKRIYWVDG 777
Query: 258 KLDFI 262
KL+ I
Sbjct: 778 KLNII 782
>gi|119588380|gb|EAW67974.1| low density lipoprotein receptor-related protein 4, isoform CRA_a
[Homo sapiens]
gi|119588381|gb|EAW67975.1| low density lipoprotein receptor-related protein 4, isoform CRA_a
[Homo sapiens]
Length = 1678
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 191/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 96 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHT 155
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 156 GYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYELRPDRRSCKALG-PEPV 214
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 215 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 274
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 275 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 334
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 335 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 392
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 393 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 418
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 419 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 462
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1085 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1144
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1145 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1194
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1195 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1254
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1255 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1310
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LV G + AL
Sbjct: 1311 --------------------------------RIESADLNGKLRQVLV-GHVSHPFALTQ 1337
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1338 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1368
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 129/248 (52%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L +D TC PG S + +
Sbjct: 779 CAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCS-------PGMNSFLIFARRID 831
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S H I A+L+ G H
Sbjct: 832 IRMVSLDIPYFADVVVPINITMKNTIAVGVDPQEGKVYWSDSTLHRISRANLD--GSQH- 888
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 889 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 947
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D A+ ++ +AD+
Sbjct: 948 YHEMG--FMYWTDWGENAKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHT 1005
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1006 ERIEAADL 1013
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 140/326 (42%), Gaps = 91/326 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----------- 126
G C+ +C + +Y C+C G+ + +H C FL+ + R I
Sbjct: 480 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTEDLS 536
Query: 127 ----------------------------LVADLEEKGK-DHRAQDIVV-SGLDLVEGLAY 156
+ D + K D Q++VV + L+ GLA
Sbjct: 537 DDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAI 596
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR ++++P G +++WTDWG +
Sbjct: 597 DWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGG--YMYWTDWGAS 654
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD S R IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 655 PKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF------- 702
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
A +DGS +L+ QL L L +Y
Sbjct: 703 ----------------------AGLDGSKRKVLIGSQLPHPFGLTLYGERIY-------- 732
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G +R T+
Sbjct: 733 ---WTDWQTKSIQSADRLTGLDRETL 755
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1118 GKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1173
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1174 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1229
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1230 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1280
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1281 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1326
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 106/222 (47%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D RI R +DGS II+T + +GL
Sbjct: 845 VVVPINITMKNTIAVGVDPQEGKVYWSD-STLHRISRANLDGSQHEDIITTGLQTTDGLA 903
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 904 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 929
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+
Sbjct: 930 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRAVLIN 980
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 981 NNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1022
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 116/298 (38%), Gaps = 41/298 (13%)
Query: 129 ADLEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
A LE G D + ++++ L GL D + W D+ RIE D NG NR L
Sbjct: 963 AKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1022
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P G+ L S +++WTDW + I R D S +I + P + +
Sbjct: 1023 SP-VQHPYGLTLLDS----YIYWTDW-QTRSIHR--ADKGTGSNVILVRSNLPGLMDMQA 1074
Query: 248 ATRRVYFADSKLDFID--CKSLEIKTNVNYSTIFRKLYWIDEGGN--------------- 290
R +K + C L + +S + G
Sbjct: 1075 VDRAQPLGFNKCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSR 1134
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENPR 348
G +I D ++ + V +L ++LD + +G +YY+ +
Sbjct: 1135 GSIRRISLDTSDHTDVHVPVP-ELNNVISLDYDSVDGKVYYTDVFLD------------V 1181
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I R ++GSN T+I + +GL +D R +Y+ D+ + I+ DG+ R+ +I
Sbjct: 1182 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLI 1239
>gi|390470505|ref|XP_002807383.2| PREDICTED: low-density lipoprotein receptor-related protein 4-like
[Callithrix jacchus]
Length = 1193
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 192/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DEGP + C G C+ C CTC
Sbjct: 400 RCIGQRKLCNGVNDCGDNSDEGPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHT 459
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 460 GYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYELRPDRRSCKALG-PEPV 518
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 519 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 578
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 579 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 638
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 639 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 696
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 697 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 722
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 723 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 766
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 11/137 (8%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G C+ +C + +Y C+C G+ + +H C FL+ + R I + +
Sbjct: 784 GGCTHLCLPSGQNYTCACPTGF-RKISSHAC--AQSLDKFLLFARRMDIRRISFDTED-- 838
Query: 138 HRAQDIVVSGLDLVEGLAYDWIG--GHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D V+ D+ +A DW H+YW D + I +GT + V+ ++ P
Sbjct: 839 --LSDDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPA 896
Query: 196 GMMLDPSPGTRWLFWTD 212
G+ +D T L+WTD
Sbjct: 897 GLAIDWV--TNKLYWTD 911
>gi|390179015|ref|XP_003736781.1| GA27443, isoform E [Drosophila pseudoobscura pseudoobscura]
gi|388859678|gb|EIM52854.1| GA27443, isoform E [Drosophila pseudoobscura pseudoobscura]
Length = 1005
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 173/342 (50%), Gaps = 67/342 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ L++VCD + DCP+G DE G C + EC K G C + C +G C C G LS
Sbjct: 417 QCIALSRVCDKRKDCPDGEDEPAGKCGVNECASKNGGCMHHCVDLAVGHRCECHEGYKLS 476
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D TC D++ECE PG CSQ+C N G + C C GY+ + NHT CKA A L+++
Sbjct: 477 GDKRTCVDIDECENPGTCSQLCINEIGGFKCECEAGYMRDPRNHTRCKA-GEGHASLLLA 535
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 536 RRH-----DIRKIALDHMEMTSIVNSTKSATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 590
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + +G VL +D + PR +
Sbjct: 591 NEKTVVLKQSSVTSDGLAVDWIYNHVYYTDTHKCTIELTNFDGNMGKVLIEDALDIPRSI 650
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TIIS + WPNG+TLD+ +R+Y+ D
Sbjct: 651 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVRKRIYWVDG 708
Query: 258 KLDFIDCKSLE--IKTNVNYSTIFRK-----------LYWID 286
KL+ I + + + + YST + + +YW D
Sbjct: 709 KLNVISSANYDGSQRRQILYSTEYLRHPFSISTFEDYIYWTD 750
>gi|348558906|ref|XP_003465257.1| PREDICTED: low-density lipoprotein receptor-related protein 4-like
[Cavia porcellus]
Length = 1905
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 191/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 323 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQTVRGAVQCTCHT 382
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 383 GYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALG-PEPV 441
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 442 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 501
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 502 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 561
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 562 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 619
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 620 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 645
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 646 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 689
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 157/345 (45%), Gaps = 69/345 (20%)
Query: 30 LAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCT 85
L +C G CS+ C P P G C CP G L D TC E G ++
Sbjct: 1310 LNKCGSGNGGCSHLCLPRPSGFSCACPTGIQLKADGRTCDPSPETYLLFSSRGSIRRISL 1369
Query: 86 NTKGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRA 140
+T + N L+YD+ K + ++ FL + R + +++E
Sbjct: 1370 DTSDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET------- 1421
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + +
Sbjct: 1422 --VIGQGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVF 1479
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1480 PRKG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD 1537
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
+I A+++G +LVS + AL
Sbjct: 1538 ----------------------------------RIESADLNGKLRQVLVS-HVSHPFAL 1562
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G ++ T+++
Sbjct: 1563 TQQD-----------RWIYWTDW-QTKSIQRVDKYSGRSKETVLA 1595
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 135/307 (43%), Gaps = 91/307 (29%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----------- 126
G C+ +C + +Y C+C G+ + +H C FL+ + R I
Sbjct: 707 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTEDLS 763
Query: 127 ----------------------------LVADLEEKGK-DHRAQDIVV-SGLDLVEGLAY 156
+ D + K D Q++VV + L+ GLA
Sbjct: 764 DDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAI 823
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR ++++P G +++WTDWG +
Sbjct: 824 DWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGG--YMYWTDWGAS 881
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD S R IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 882 PKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF------- 929
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
A +DGS+ +L+ QL L L +Y
Sbjct: 930 ----------------------AGLDGSSRKVLIGSQLPHPFGLTLYGERIY-------- 959
Query: 337 WLFWTDW 343
WTDW
Sbjct: 960 ---WTDW 963
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 123/248 (49%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L D TC PG S + +
Sbjct: 1006 CAAENGGCSHLCLRSPNPSGFSCTCPTGINLLPDGKTCS-------PGMNSFLIFARRID 1058
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S H I A+L+ G H
Sbjct: 1059 VRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHRISRANLD--GSQH- 1115
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GL D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1116 -EDIITTGLQTTDGLTVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1174
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G ++WTDWGEN ++ER MDGS R+ +I+ + WPNGLT+D + ++ +AD+
Sbjct: 1175 YHEMGL--MYWTDWGENAKLERAAMDGSERTVLINNNLGWPNGLTVDKVSSQLLWADAHT 1232
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1233 ERIEAADL 1240
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1345 GRTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1400
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1401 YTDVFLDVIRRADLNGSNMETVIGQGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1456
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1457 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1507
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1508 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1553
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 103/224 (45%), Gaps = 48/224 (21%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D RI R +DGS II+T + +GLT
Sbjct: 1072 VVVPINITMKNTIAIGVDPQEGKVYWSD-STLHRISRANLDGSQHEDIITTGLQTTDGLT 1130
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1131 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1156
Query: 305 NASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
+LV L A+ L E G++Y WTDWGEN ++ER MDGS R+ +
Sbjct: 1157 MRKVLVWQNLDSPRAIVLYHEMGLMY-----------WTDWGENAKLERAAMDGSERTVL 1205
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I+ + WPNGLT+D + ++ +AD+ + I+ + G R ++
Sbjct: 1206 INNNLGWPNGLTVDKVSSQLLWADAHTERIEAADLSGGNRHTLV 1249
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 116/298 (38%), Gaps = 41/298 (13%)
Query: 129 ADLEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
A LE D + ++++ L GL D + + W D+ RIE D +G NR L
Sbjct: 1190 AKLERAAMDGSERTVLINNNLGWPNGLTVDKVSSQLLWADAHTERIEAADLSGGNRHTLV 1249
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P G+ L S +++WTDW + I R D S +I + P + +
Sbjct: 1250 SP-VQHPYGLTLLDS----YIYWTDW-QTRSIHR--ADKGTGSNVILVRSNLPGLMDIQA 1301
Query: 248 ATRRVYFADSKLDFID--CKSLEIKTNVNYSTIFRKLYWIDEGG---------------N 290
R +K + C L + +S + G
Sbjct: 1302 VDRAQPLGLNKCGSGNGGCSHLCLPRPSGFSCACPTGIQLKADGRTCDPSPETYLLFSSR 1361
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENPR 348
G +I D ++ + V +L ++LD + +G +YY+ +
Sbjct: 1362 GSIRRISLDTSDHTDVHVPVP-ELNNVISLDYDSVDGKVYYTDVFLD------------V 1408
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I R ++GSN T+I + +GL +D R +Y+ D+ + I+ DG+ R+ +I
Sbjct: 1409 IRRADLNGSNMETVIGQGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLI 1466
>gi|390179011|ref|XP_003736779.1| GA27443, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388859676|gb|EIM52852.1| GA27443, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 822
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 173/342 (50%), Gaps = 67/342 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ L++VCD + DCP+G DE G C + EC K G C + C +G C C G LS
Sbjct: 294 QCIALSRVCDKRKDCPDGEDEPAGKCGVNECASKNGGCMHHCVDLAVGHRCECHEGYKLS 353
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D TC D++ECE PG CSQ+C N G + C C GY+ + NHT CKA A L+++
Sbjct: 354 GDKRTCVDIDECENPGTCSQLCINEIGGFKCECEAGYMRDPRNHTRCKA-GEGHASLLLA 412
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 413 RRH-----DIRKIALDHMEMTSIVNSTKSATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 467
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + +G VL +D + PR +
Sbjct: 468 NEKTVVLKQSSVTSDGLAVDWIYNHVYYTDTHKCTIELTNFDGNMGKVLIEDALDIPRSI 527
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TIIS + WPNG+TLD+ +R+Y+ D
Sbjct: 528 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVRKRIYWVDG 585
Query: 258 KLDFIDCKSLE--IKTNVNYSTIFRK-----------LYWID 286
KL+ I + + + + YST + + +YW D
Sbjct: 586 KLNVISSANYDGSQRRQILYSTEYLRHPFSISTFEDYIYWTD 627
>gi|390179009|ref|XP_003736778.1| GA27443, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859675|gb|EIM52851.1| GA27443, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 1052
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 173/342 (50%), Gaps = 67/342 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ L++VCD + DCP+G DE G C + EC K G C + C +G C C G LS
Sbjct: 464 QCIALSRVCDKRKDCPDGEDEPAGKCGVNECASKNGGCMHHCVDLAVGHRCECHEGYKLS 523
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D TC D++ECE PG CSQ+C N G + C C GY+ + NHT CKA A L+++
Sbjct: 524 GDKRTCVDIDECENPGTCSQLCINEIGGFKCECEAGYMRDPRNHTRCKA-GEGHASLLLA 582
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 583 RRH-----DIRKIALDHMEMTSIVNSTKSATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 637
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + +G VL +D + PR +
Sbjct: 638 NEKTVVLKQSSVTSDGLAVDWIYNHVYYTDTHKCTIELTNFDGNMGKVLIEDALDIPRSI 697
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TIIS + WPNG+TLD+ +R+Y+ D
Sbjct: 698 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVRKRIYWVDG 755
Query: 258 KLDFIDCKSLE--IKTNVNYSTIFRK-----------LYWID 286
KL+ I + + + + YST + + +YW D
Sbjct: 756 KLNVISSANYDGSQRRQILYSTEYLRHPFSISTFEDYIYWTD 797
>gi|410912696|ref|XP_003969825.1| PREDICTED: low-density lipoprotein receptor-related protein 4-like
[Takifugu rubripes]
Length = 1923
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 133/419 (31%), Positives = 186/419 (44%), Gaps = 95/419 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ KVC+ DC +G DE P D C G CS C CTC
Sbjct: 341 RCIGQRKVCNEVNDCGDGTDEQPHHDCRPRSSEGNCNQNNGGCSQKCQMARGLVQCTCHT 400
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI------ 111
G L +D CQD++EC + GYCSQ CTNT+G++ C C +GY L D +CKA+
Sbjct: 401 GYRLMDDGKACQDVDECAEEGYCSQGCTNTEGAFQCWCVQGYELRPDKRSCKALGPEPVL 460
Query: 112 -------------NHSAAFLIISNRHSILVADLEEKGK------------------DHRA 140
+ S L+++N + + D +
Sbjct: 461 LFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHSQELVFWSDVTLDRIMKANLNGSNV 520
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+++V +GL+ GLA DWI +YW DS +RIEV + +GT+R VL N+ +PR + L
Sbjct: 521 EEVVSTGLESPGGLAIDWIHDKLYWTDSGTSRIEVANLDGTHRKVLLWQNMEKPRAIALH 580
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G ++WTDWG PRIE MDGSNR I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 581 PIEGK--IYWTDWGNTPRIEYANMDGSNRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHH 638
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
I+ KA++DG N ++S L A+
Sbjct: 639 VIE----------------------------------KADLDGRNRKAVISQGLPHPFAI 664
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ LY WTDW G N+ II K+++P +DI T
Sbjct: 665 TVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 707
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 159/353 (45%), Gaps = 89/353 (25%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
+C + G C++ C P P G C CP G +L D +C D E +Y
Sbjct: 1330 KCGRRNGGCTHLCLPRPNGTSCACPTGILLKGDGRSCDDSPE----------------TY 1373
Query: 92 ICSCNEGYV----LEYDNHTCKAINHSAAFLIISNRHS---------------ILVADLE 132
+ N V L+ D+HT + +IS + I A+L+
Sbjct: 1374 LLFSNRVSVRRISLDTDDHTDVHVPVPELHNVISLDYDSVDGKLYYTDVTLDVIRRANLD 1433
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
G + ++ GL +GLA DW+ ++YW D+ N IEV +GT R VL +++
Sbjct: 1434 GTG----METVISQGLKTTDGLAVDWVARNMYWTDTGRNTIEVARLDGTCRKVLINNSLD 1489
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
+PR + PS G +LFWTDWG +IER +DGS+R +I+T + WPNGLTLD TRR+
Sbjct: 1490 EPRAIAAFPSKG--FLFWTDWGHIAKIERSHLDGSDRKVLINTDLGWPNGLTLDYDTRRI 1547
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
++ D+ LD +I ++++G ILVS
Sbjct: 1548 FWVDAHLD----------------------------------RIESSDLNGKLRQILVS- 1572
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD-GSNRSTIIS 364
+ AL ++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1573 PVSHPFALTQQD-----------RWIYWTDW-QTKSIQRVDKHTGRNKETVLA 1613
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 142/326 (43%), Gaps = 91/326 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI--LVADLEEKG 135
G CS +C + +Y C+C G+ + ++H C + FL+ + R I + D E+
Sbjct: 725 GGCSHLCLPSNKTYTCACPTGFK-KVNHHICA--DGLDKFLLFARRTDIRRISFDTEDMS 781
Query: 136 KD--------------------------------HRA------QDIVV-SGLDLVEGLAY 156
D +RA Q++VV + L+ GLA
Sbjct: 782 DDVIPLADVRNAVALDWDAKDGYIYWTDVTTDSINRALWNGTQQEVVVDTSLESPAGLAI 841
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR +++DP G +++WTDWG N
Sbjct: 842 DWVTSKLYWTDAGTDRIEVSNADGSMRTVLIWENLDRPRDIVVDPIGG--FMYWTDWGAN 899
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD S+R IIS+ + WPNGL +D T+R+Y+AD+ + I+
Sbjct: 900 PKIERAGMDASSRIVIISSNLTWPNGLAIDYDTKRLYWADAGMKTIE------------- 946
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
N DGS +L+ QL L + LY
Sbjct: 947 ---------------------YGNFDGSGRRVLIGSQLPHPFGLTVHEDKLY-------- 977
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G R T+
Sbjct: 978 ---WTDWQSKSIQSANKLTGLGRQTL 1000
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 181/423 (42%), Gaps = 64/423 (15%)
Query: 38 GLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY-ICS 94
G CS+ C P P + C CP G L D TC PG S + + + S
Sbjct: 1029 GGCSHLCLLAPAPKASSCACPTGINLQTDGKTCT-------PGMSSFLIFARRTDIRMVS 1081
Query: 95 CNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRA-------QDIVVSG 147
+ Y + ++ ++ A + + +D K K RA +DIV +G
Sbjct: 1082 LDIPYFADVVLAVNTSMKNTIAIGVDPKEGKVYWSDSTMK-KISRASISGKAQEDIVSTG 1140
Query: 148 LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
L +GLA D +G IYW D+ NRIEV + +G+ R +L N+ PR + L G +
Sbjct: 1141 LMTTDGLAVDAVGRKIYWTDTGTNRIEVANLDGSMRKILVWQNLDSPRAIALYNEMG--Y 1198
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
L+WTDWGE+ ++ER MDGS+R +IS + WPNGL +D A ++ +AD+ + I+ L
Sbjct: 1199 LYWTDWGEHAKLERSAMDGSDRVVLISNNLGWPNGLAIDTAGSQLLWADAHTERIEAADL 1258
Query: 268 EIKTNVNYSTIFRKLYWIDEGGNGV------PLKIGKANMDGSNASILVSGQ---LYEAL 318
+ T + Y + G+ + I +A+ + +I V L +
Sbjct: 1259 NGQNRRTLVTPVQHPYGLTLLGSHIYWTDWQSRSIQRADKNTGTNTITVRPNLPGLMDIQ 1318
Query: 319 ALDLENGMLYYSTLK----CTRWLFWTDWG-------------------ENPR------- 348
A+D+E + + + CT G ++P
Sbjct: 1319 AVDMERPLGFNKCGRRNGGCTHLCLPRPNGTSCACPTGILLKGDGRSCDDSPETYLLFSN 1378
Query: 349 ---IERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVYFADSKLDFIDFCNYDGTGRQ 403
+ RI +D + + + N ++LD + ++Y+ D LD I N DGTG +
Sbjct: 1379 RVSVRRISLDTDDHTDVHVPVPELHNVISLDYDSVDGKLYYTDVTLDVIRRANLDGTGME 1438
Query: 404 QVI 406
VI
Sbjct: 1439 TVI 1441
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 158/361 (43%), Gaps = 88/361 (24%)
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
AI+ + + L+ ++ H+ + + G++ R +V+ + GL +G HIYW D +
Sbjct: 1235 AIDTAGSQLLWADAHTERIEAADLNGQNRRT---LVTPVQHPYGLTL--LGSHIYWTDWQ 1289
Query: 170 LNRIEVCDEN-GTNRIV------------------------------------LAKDNIT 192
I+ D+N GTN I L + N T
Sbjct: 1290 SRSIQRADKNTGTNTITVRPNLPGLMDIQAVDMERPLGFNKCGRRNGGCTHLCLPRPNGT 1349
Query: 193 Q---PRGMML-------DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI---------- 232
P G++L D SP T LF + RI +D + + +
Sbjct: 1350 SCACPTGILLKGDGRSCDDSPETYLLF----SNRVSVRRISLDTDDHTDVHVPVPELHNV 1405
Query: 233 -------ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
+ K+Y+ + +TLD+ RR + ++ + + L+ + + R +YW
Sbjct: 1406 ISLDYDSVDGKLYYTD-VTLDV-IRRANLDGTGMETVISQGLKTTDGLAVDWVARNMYWT 1463
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
D G N + + A +DG+ +L++ L E A+ + +LFWTDWG
Sbjct: 1464 DTGRNTIEV----ARLDGTCRKVLINNSLDEPRAI---------AAFPSKGFLFWTDWGH 1510
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+IER +DGS+R +I+T + WPNGLTLD TRR+++ D+ LD I+ + +G RQ +
Sbjct: 1511 IAKIERSHLDGSDRKVLINTDLGWPNGLTLDYDTRRIFWVDAHLDRIESSDLNGKLRQIL 1570
Query: 406 I 406
+
Sbjct: 1571 V 1571
>gi|291243160|ref|XP_002741471.1| PREDICTED: vitellogenin receptor, putative-like [Saccoglossus
kowalevskii]
Length = 799
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 129/396 (32%), Positives = 185/396 (46%), Gaps = 80/396 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++ + CDG DC +G+DE CD+ EC G C +TCH P+ C+C PG +L
Sbjct: 242 ECIHYSWKCDGDEDCHDGSDEF-NCDINECDTNNGGCYHTCHDLPISHYCSCTPGYVLDV 300
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF------ 117
D TC D+NEC+ PG CSQ C N KG + C+C EGY L+ D+ TCKA+
Sbjct: 301 DGKTCNDINECDIPGQCSQNCENVKGGFKCTCIEGYELDDDHRTCKALGDEPRLLIADRK 360
Query: 118 -------------LIISNRHSILVADLE-EKG----KDHRAQDIVVS------------- 146
LII N S + D + KG D + I+V
Sbjct: 361 DIREINLFTKEYRLIIDNLRSAVALDYDYAKGYLYWTDVATEQILVQFSFYGNNMPLFFI 420
Query: 147 -------------------GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD----ENGTNR 183
++ +G+A DWI +IYW D+ N IEV R
Sbjct: 421 LTELQLMVVKRKGEVIIDKNVNTPDGVAVDWIYQNIYWTDTGTNTIEVAHLEKRHEEIQR 480
Query: 184 IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
VL +N+ +PR ++LDP G W++WTDWGE P+IER GM+G R ++ I WPNGL
Sbjct: 481 TVLIDENLDEPRAIVLDPIEG--WMYWTDWGEPPKIERAGMNGQQRQVLVDEDIQWPNGL 538
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVNY------------STIFRKL-YWIDEGGN 290
+D TR +++AD+KL+ I +L VN T+F L YW D
Sbjct: 539 AIDYVTRHIFWADAKLNMIASTNLNGGERVNIIRSETILSHPFSITVFGDLMYWTDWETE 598
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLENGM 326
I KAN + ++ +LY +++ + + +
Sbjct: 599 S----IHKANKFTGSDPTTITEKLYSPMSIHVYHSL 630
>gi|195504248|ref|XP_002098999.1| GE10671 [Drosophila yakuba]
gi|194185100|gb|EDW98711.1| GE10671 [Drosophila yakuba]
Length = 922
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 115/305 (37%), Positives = 161/305 (52%), Gaps = 54/305 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ ++KVCD + DCP+G DE G C + EC K G C + C +G C C G LS
Sbjct: 336 QCIAISKVCDKRKDCPDGEDEPAGKCGINECASKNGGCMHQCIDLKVGHHCECHEGYQLS 395
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D C D+NEC+ PG CSQ+C N G + C C GY+ + NHT CKA + A L+++
Sbjct: 396 PDKRNCLDINECDVPGKCSQICVNEIGGFKCECEAGYMRDPKNHTRCKA-SEGHASLLLA 454
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 455 RRH-----DIRKIALDHMEMTSIVNSTKAATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 509
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + G+ VL KD++ PR +
Sbjct: 510 NEKTVVLTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSI 569
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TIIS + WPNG+TLD+ +R+Y+ D
Sbjct: 570 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDG 627
Query: 258 KLDFI 262
KL+ I
Sbjct: 628 KLNVI 632
>gi|354469954|ref|XP_003497377.1| PREDICTED: low-density lipoprotein receptor-related protein 4-like
[Cricetulus griseus]
Length = 2009
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 191/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 427 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCSVNNGGCAQKCQMVRGAVQCTCHT 486
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 487 GYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALG-PEPV 545
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 546 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 605
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 606 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 665
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 666 HPMEGT--IYWTDWGNTPRIEASSMDGSARRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 723
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 724 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 749
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 750 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 793
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 155/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1416 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1475
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + + +E
Sbjct: 1476 DDHTDVHVPVPGLNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSSMET--------- 1525
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1526 VIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1585
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD RR+Y+ D+ LD
Sbjct: 1586 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDIRRIYWVDAHLD-- 1641
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1642 --------------------------------RIESADLNGKLRQVLVS-HVSHPFALTQ 1668
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1669 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1699
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 136/307 (44%), Gaps = 91/307 (29%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----------- 126
G C+ +C + +Y C+C G+ + ++H C FL+ + R I
Sbjct: 811 GGCTHLCLPSGQNYTCACPTGF-RKINSHACA--QSLDKFLLFARRMDIRRISFDTEDLS 867
Query: 127 ----------------------------LVADLEEKGK-DHRAQDIVV-SGLDLVEGLAY 156
+ D + K D Q++VV + L+ GLA
Sbjct: 868 DDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAI 927
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR ++++P G +++WTDWG +
Sbjct: 928 DWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGG--YMYWTDWGAS 985
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD S+R IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 986 PKIERAGMDASSRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF------- 1033
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
A +DGS +L+ QL L L +Y
Sbjct: 1034 ----------------------AGLDGSRRKVLIGSQLPHPFGLTLYGQRIY-------- 1063
Query: 337 WLFWTDW 343
WTDW
Sbjct: 1064 ---WTDW 1067
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/248 (36%), Positives = 128/248 (51%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C G CS+ C P P G CTCP G L D TC PG S + +
Sbjct: 1110 CAVDNGGCSHLCLRSPNPSGFSCTCPTGINLLLDGKTCS-------PGMNSFLIFARRID 1162
Query: 90 SYICSCNEGY---VLEYDNHTCK---AIN----HSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K AI + S H I A L+ G H
Sbjct: 1163 VRMVSLDIPYFADVVVPINMTMKNTIAIGVDPLEGKVYWSDSTLHRISRASLD--GSQH- 1219
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1220 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1278
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D A+ ++ +AD+
Sbjct: 1279 YHEMG--FMYWTDWGENAKLERSGMDGSDRTVLINHNLGWPNGLTVDKASSQLLWADAHT 1336
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1337 ERIEAADL 1344
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 137/333 (41%), Gaps = 98/333 (29%)
Query: 78 GYCSQMCTNTK--GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G CS +C + + C+C G L D TC +S FLI + R + + L+
Sbjct: 1115 GGCSHLCLRSPNPSGFSCTCPTGINLLLDGKTCSPGMNS--FLIFARRIDVRMVSLDIP- 1171
Query: 136 KDHRAQDIVVSGLDLVEGLA--YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
+ A +V + + +A D + G +YW DS L+
Sbjct: 1172 --YFADVVVPINMTMKNTIAIGVDPLEGKVYWSDSTLH---------------------- 1207
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
RI R +DGS II+T + +GL +D
Sbjct: 1208 ------------------------RISRASLDGSQHEDIITTGLQTTDGLAVD------- 1236
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
I RK+YW D G N +I N+DGS +LV
Sbjct: 1237 -----------------------AIGRKVYWTDTGTN----RIEVGNLDGSMRKVLVWQN 1269
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGL
Sbjct: 1270 LDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRTVLINHNLGWPNGL 1320
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
T+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1321 TVDKASSQLLWADAHTERIEAADLNGANRHTLV 1353
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D + + + N ++LD + +VY
Sbjct: 1449 GKTCDPSPETYLLF----SSRGSIRRISLDTDDHTDVHVPVPGLNNVISLDYDSVDGKVY 1504
Query: 254 FADSKLDFI---DCKSLEIKTNVNYST----------IFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I D ++T + + + R LYW D G N I +
Sbjct: 1505 YTDVFLDVIRRADLNGSSMETVIGHGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1560
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1561 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1611
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD RR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1612 VLINTDLGWPNGLTLDYDIRRIYWVDAHLDRIESADLNGKLRQVLV 1657
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 117/298 (39%), Gaps = 41/298 (13%)
Query: 129 ADLEEKGKDHRAQDIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
A LE G D + ++++ L GL D + W D+ RIE D NG NR L
Sbjct: 1294 AKLERSGMDGSDRTVLINHNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1353
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P G+ L S +++WTDW + I R D + S +I + P + +
Sbjct: 1354 SP-VQHPYGLTLLDS----YIYWTDW-QTRSIHR--ADKNTGSNVILVRSNLPGLMDIQA 1405
Query: 248 ATRRVYFADSKLDFID--CKSLEIKTNVNYSTIFRKLYWIDEGGN--------------- 290
R +K + C L + +S + G
Sbjct: 1406 IDRAQPLGFNKCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSR 1465
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENPR 348
G +I D ++ + V G L ++LD + +G +YY+ +
Sbjct: 1466 GSIRRISLDTDDHTDVHVPVPG-LNNVISLDYDSVDGKVYYTDVFLD------------V 1512
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I R ++GS+ T+I + +GL +D R +Y+ D+ + I+ DG+ R+ +I
Sbjct: 1513 IRRADLNGSSMETVIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLI 1570
>gi|410045106|ref|XP_508403.4| PREDICTED: low-density lipoprotein receptor-related protein 4 [Pan
troglodytes]
Length = 2048
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 191/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 466 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHT 525
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 526 GYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYELRPDRRSCKALG-PEPV 584
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 585 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 644
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 645 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 704
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 705 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 762
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 763 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 788
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 789 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 832
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1455 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1514
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1515 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1564
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1565 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1624
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1625 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1680
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1681 --------------------------------RIESADLNGKLRQVLVS-HVSHPFALTQ 1707
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1708 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1738
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 129/248 (52%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L +D TC PG S + +
Sbjct: 1149 CAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCS-------PGMNSFLIFARRID 1201
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S H I A+L+ G H
Sbjct: 1202 IRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHRISRANLD--GSQH- 1258
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1259 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1317
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D A+ ++ +AD+
Sbjct: 1318 YHEMG--FMYWTDWGENAKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHT 1375
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1376 ERIEAADL 1383
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 48/227 (21%)
Query: 137 DHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D Q++VV + L+ GLA DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR
Sbjct: 946 DGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPR 1005
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
++++P G +++WTDWG +P+IER GMD S R IIS+ + WPNGL +D ++R+Y+A
Sbjct: 1006 DIVVEPMGG--YMYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWA 1063
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ + K++E A +DGS +L+ QL
Sbjct: 1064 DAGM-----KTIEF-----------------------------AGLDGSKRKVLIGSQLP 1089
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
L L +Y WTDW + G +R T+
Sbjct: 1090 HPFGLTLYGERIY-----------WTDWQTKSIQSADRLTGLDRETL 1125
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 138/344 (40%), Gaps = 94/344 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G C+ +C + +Y C+C G+ + +H C FL+ + R I + +
Sbjct: 850 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTED-- 904
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
D V+ D+ +A DW DSR + +
Sbjct: 905 --LSDDVIPLADVRSAVALDW--------DSRDDHV------------------------ 930
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+WTD + I R DG+ + ++ T + P GL +D T
Sbjct: 931 -----------YWTDVSTDT-ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTN------- 971
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KLYW D G + +I AN DGS ++L+ L
Sbjct: 972 -----------------------KLYWTDAGTD----RIEVANTDGSMRTVLIWENLDRP 1004
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
+ +E Y ++WTDWG +P+IER GMD S R IIS+ + WPNGL +D
Sbjct: 1005 RDIVVEPMGGY---------MYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDY 1055
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++R+Y+AD+ + I+F DG+ R+ +I L F L G+
Sbjct: 1056 GSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQLPHPFGLTLYGE 1099
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1488 GKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1543
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1544 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1599
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1600 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1650
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1651 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1696
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 107/222 (48%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D + RI R +DGS II+T + +GL
Sbjct: 1215 VVVPINITMKNTIAIGVDPQEGKVYWSDSTLH-RISRANLDGSQHEDIITTGLQTTDGLA 1273
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1274 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1299
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+
Sbjct: 1300 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRAVLIN 1350
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1351 NNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1392
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 139/334 (41%), Gaps = 52/334 (15%)
Query: 131 LEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + +++S L GLA D+ +YW D+ + IE +G+ R VL
Sbjct: 1027 IERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGS 1086
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
+ P G+ L G R ++WTDW + G +R T+ N + + +
Sbjct: 1087 QLPHPFGLTL---YGER-IYWTDWQTKSIQSADRLTGLDRETLQEN---LENLMDIHVFH 1139
Query: 250 RRVYFADS--KLDFIDCKSLEIKT--NVNYS-TIFRKLYWIDEGGNGVP----------- 293
RR + ++ C L +++ +S T + + +G P
Sbjct: 1140 RRRPPVSTPCAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCSPGMNSFLIFARR 1199
Query: 294 LKIGKANMD---GSNASILVSGQLYEALAL--DLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ I ++D ++ + ++ + +A+ D + G +Y+S R
Sbjct: 1200 IDIRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHR------------ 1247
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I R +DGS II+T + +GL +D R+VY+ D+ + I+ N DG+ R+ ++
Sbjct: 1248 ISRANLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQ 1307
Query: 409 DLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+L + A+ L E G +Y++ G
Sbjct: 1308 NL-----------DSPRAIVLYHEMGFMYWTDWG 1330
>gi|395816213|ref|XP_003781601.1| PREDICTED: low-density lipoprotein receptor-related protein 4
[Otolemur garnettii]
Length = 2050
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 191/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 468 RCIGQRKLCNGANDCGDNSDESPQQNCRPRTGEENCSVNNGGCAQKCQMVRGTVQCTCHT 527
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 528 GYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYELRPDRRSCKALG-PEPV 586
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 587 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 646
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 647 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 706
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 707 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 764
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 765 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 790
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 791 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 834
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1457 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1516
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1517 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1566
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1567 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1626
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1627 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1682
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1683 --------------------------------RIESADLNGKLRQVLVS-HVSHPFALTQ 1709
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1710 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1740
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 127/248 (51%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L D TC PG S + +
Sbjct: 1151 CAMENGGCSHLCLRSPNPSGFSCTCPTGINLLPDGKTCS-------PGMNSFLIFARRID 1203
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S H I A+L+ G H
Sbjct: 1204 VRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHRISRANLD--GSQH- 1260
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1261 -EDIITTGLQTTDGLAVDAIGHKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1319
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS R+ +I+ + WPNGLT+D A+ ++ +AD+
Sbjct: 1320 YHEMG--FMYWTDWGENAKLERSGMDGSERTVLINNNLGWPNGLTVDKASSQLLWADAHT 1377
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1378 ERIEAADL 1385
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 141/326 (43%), Gaps = 91/326 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----------- 126
G C+ +C + +Y C+C G+ + +H C FL+ + R I
Sbjct: 852 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTEDLS 908
Query: 127 ----------------------------LVADLEEKGK-DHRAQDIVV-SGLDLVEGLAY 156
+ D + K D Q++VV + L+ GLA
Sbjct: 909 DDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAI 968
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR ++++P G +++WTDWG +
Sbjct: 969 DWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGG--YMYWTDWGAS 1026
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD S+R IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 1027 PKIERAGMDASDRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF------- 1074
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
A +DGS +L+ QL L L +Y
Sbjct: 1075 ----------------------AGLDGSKRKVLIGSQLPHPFGLTLYGERIY-------- 1104
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G +R T+
Sbjct: 1105 ---WTDWQTKSIQSADRLTGLDRETL 1127
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1490 GKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1545
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1546 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1601
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1602 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1652
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1653 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1698
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 105/222 (47%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D + RI R +DGS II+T + +GL
Sbjct: 1217 VVVPINITMKNTIAIGVDPQEGKVYWSDSTLH-RISRANLDGSQHEDIITTGLQTTDGLA 1275
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I K+YW D G N +I N+DGS
Sbjct: 1276 VD------------------------------AIGHKVYWTDTGTN----RIEVGNLDGS 1301
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGEN ++ER GMDGS R+ +I+
Sbjct: 1302 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSERTVLIN 1352
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1353 NNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1394
>gi|410225986|gb|JAA10212.1| low density lipoprotein receptor-related protein 4 [Pan
troglodytes]
Length = 1905
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 191/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 323 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHT 382
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 383 GYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYELRPDRRSCKALG-PEPV 441
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 442 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 501
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 502 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 561
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 562 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 619
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 620 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 645
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 646 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 689
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1312 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1371
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1372 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1421
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1422 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1481
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1482 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1537
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1538 --------------------------------RIESADLNGKLRQVLVS-HVSHPFALTQ 1564
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1565 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1595
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 129/248 (52%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L +D TC PG S + +
Sbjct: 1006 CAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCS-------PGMNSFLIFARRID 1058
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S H I A+L+ G H
Sbjct: 1059 IRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHRISRANLD--GSQH- 1115
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1116 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1174
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D A+ ++ +AD+
Sbjct: 1175 YHEMG--FMYWTDWGENAKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHT 1232
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1233 ERIEAADL 1240
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 48/227 (21%)
Query: 137 DHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D Q++VV + L+ GLA DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR
Sbjct: 803 DGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPR 862
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
++++P G +++WTDWG +P+IER GMD S R IIS+ + WPNGL +D ++R+Y+A
Sbjct: 863 DIVVEPMGG--YMYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWA 920
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ + K++E A +DGS +L+ QL
Sbjct: 921 DAGM-----KTIEF-----------------------------AGLDGSKRKVLIGSQLP 946
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
L L +Y WTDW + G +R T+
Sbjct: 947 HPFGLTLYGERIY-----------WTDWQTKSIQSADRLTGLDRETL 982
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 138/344 (40%), Gaps = 94/344 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G C+ +C + +Y C+C G+ + +H C FL+ + R I + +
Sbjct: 707 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTED-- 761
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
D V+ D+ +A DW DSR + +
Sbjct: 762 --LSDDVIPLADVRSAVALDW--------DSRDDHV------------------------ 787
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+WTD + I R DG+ + ++ T + P GL +D T
Sbjct: 788 -----------YWTDVSTDT-ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTN------- 828
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KLYW D G + +I AN DGS ++L+ L
Sbjct: 829 -----------------------KLYWTDAGTD----RIEVANTDGSMRTVLIWENLDRP 861
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
+ +E Y ++WTDWG +P+IER GMD S R IIS+ + WPNGL +D
Sbjct: 862 RDIVVEPMGGY---------MYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDY 912
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++R+Y+AD+ + I+F DG+ R+ +I L F L G+
Sbjct: 913 GSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQLPHPFGLTLYGE 956
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1345 GKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1400
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1401 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1456
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1457 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1507
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1508 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1553
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 106/222 (47%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D RI R +DGS II+T + +GL
Sbjct: 1072 VVVPINITMKNTIAIGVDPQEGKVYWSD-STLHRISRANLDGSQHEDIITTGLQTTDGLA 1130
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1131 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1156
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+
Sbjct: 1157 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRAVLIN 1207
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1208 NNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1249
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 139/334 (41%), Gaps = 52/334 (15%)
Query: 131 LEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + +++S L GLA D+ +YW D+ + IE +G+ R VL
Sbjct: 884 IERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGS 943
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
+ P G+ L G R ++WTDW + G +R T+ N + + +
Sbjct: 944 QLPHPFGLTL---YGER-IYWTDWQTKSIQSADRLTGLDRETLQEN---LENLMDIHVFH 996
Query: 250 RRVYFADS--KLDFIDCKSLEIKT--NVNYS-TIFRKLYWIDEGGNGVP----------- 293
RR + ++ C L +++ +S T + + +G P
Sbjct: 997 RRRPPVSTPCAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCSPGMNSFLIFARR 1056
Query: 294 LKIGKANMD---GSNASILVSGQLYEALAL--DLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ I ++D ++ + ++ + +A+ D + G +Y+S R
Sbjct: 1057 IDIRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHR------------ 1104
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I R +DGS II+T + +GL +D R+VY+ D+ + I+ N DG+ R+ ++
Sbjct: 1105 ISRANLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQ 1164
Query: 409 DLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+L + A+ L E G +Y++ G
Sbjct: 1165 NL-----------DSPRAIVLYHEMGFMYWTDWG 1187
>gi|198454262|ref|XP_002137824.1| GA27443, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198132718|gb|EDY68382.1| GA27443, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 1096
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 173/342 (50%), Gaps = 67/342 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ L++VCD + DCP+G DE G C + EC K G C + C +G C C G LS
Sbjct: 503 QCIALSRVCDKRKDCPDGEDEPAGKCGVNECASKNGGCMHHCVDLAVGHRCECHEGYKLS 562
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D TC D++ECE PG CSQ+C N G + C C GY+ + NHT CKA A L+++
Sbjct: 563 GDKRTCVDIDECENPGTCSQLCINEIGGFKCECEAGYMRDPRNHTRCKA-GEGHASLLLA 621
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 622 RRH-----DIRKIALDHMEMTSIVNSTKSATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 676
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + +G VL +D + PR +
Sbjct: 677 NEKTVVLKQSSVTSDGLAVDWIYNHVYYTDTHKCTIELTNFDGNMGKVLIEDALDIPRSI 736
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TIIS + WPNG+TLD+ +R+Y+ D
Sbjct: 737 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVRKRIYWVDG 794
Query: 258 KLDFIDCKSLE--IKTNVNYSTIFRK-----------LYWID 286
KL+ I + + + + YST + + +YW D
Sbjct: 795 KLNVISSANYDGSQRRQILYSTEYLRHPFSISTFEDYIYWTD 836
>gi|403255511|ref|XP_003920469.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 4 [Saimiri boliviensis
boliviensis]
Length = 2080
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 191/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 498 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHT 557
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 558 GYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYELRPDRRSCKALG-PEPV 616
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 617 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 676
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 677 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 736
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 737 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 794
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 795 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 820
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 821 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 864
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 158/343 (46%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C K G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1487 KCGSKNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1546
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ + N L+YD+ K + ++ FL + R + +++E
Sbjct: 1547 SDNTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1596
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1597 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1656
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1657 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1712
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1713 --------------------------------RIESADLNGKLRQVLVS-HVSHPFALTQ 1739
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1740 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1770
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 140/326 (42%), Gaps = 91/326 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----------- 126
G C+ +C + +Y C+C G+ + +H C FL+ + R I
Sbjct: 882 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTEDLS 938
Query: 127 ----------------------------LVADLEEKGK-DHRAQDIVV-SGLDLVEGLAY 156
+ D + K D Q++VV + L+ GLA
Sbjct: 939 DDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAI 998
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR ++++P G +++WTDWG +
Sbjct: 999 DWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGG--YMYWTDWGAS 1056
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD S R IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 1057 PKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF------- 1104
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
A +DGS +L+ QL L L +Y
Sbjct: 1105 ----------------------AGLDGSKRKVLIGSQLPHPFGLTLYGERIY-------- 1134
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G +R T+
Sbjct: 1135 ---WTDWQTKSIQSADRLTGLDRETL 1157
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 128/248 (51%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTCHPTP--LGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C +P G CTCP G L +D TC PG S + +
Sbjct: 1181 CAMENGGCSHLCLRSPNLSGFSCTCPTGINLLSDGKTCS-------PGMNSFLIFARRID 1233
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S H I A L+ G H
Sbjct: 1234 IRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHRISRASLD--GSQH- 1290
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1291 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1349
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D A+ ++ +AD+
Sbjct: 1350 YHEMG--FMYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGLTVDKASSQLLWADAHT 1407
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1408 ERIEAADL 1415
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1520 GKTCDPSPETYLLF----SSRGSIRRISLDTSDNTDVHVPVPELNNVISLDYDSVDGKVY 1575
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1576 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1631
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1632 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1682
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1683 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1728
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 106/222 (47%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D RI R +DGS II+T + +GL
Sbjct: 1247 VVVPINITMKNTIAIGVDPQEGKVYWSD-STLHRISRASLDGSQHEDIITTGLQTTDGLA 1305
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1306 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1331
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+
Sbjct: 1332 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRTVLIN 1382
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1383 NNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGASRHTLV 1424
>gi|195153012|ref|XP_002017426.1| GL22297 [Drosophila persimilis]
gi|194112483|gb|EDW34526.1| GL22297 [Drosophila persimilis]
Length = 1096
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 173/342 (50%), Gaps = 67/342 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ L++VCD + DCP+G DE G C + EC K G C + C +G C C G LS
Sbjct: 503 QCIALSRVCDKRKDCPDGEDEPAGKCGVNECASKNGGCMHHCVDLAVGHRCECHEGYKLS 562
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D TC D++ECE PG CSQ+C N G + C C GY+ + NHT CKA A L+++
Sbjct: 563 GDKRTCVDIDECENPGTCSQLCINEIGGFKCECEAGYMRDPRNHTRCKA-GEGHASLLLA 621
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 622 RRH-----DIRKIALDHMEMTSIVNSTKSATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 676
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + +G VL +D + PR +
Sbjct: 677 NEKTVVLKQSSVTSDGLAVDWIYNHVYYTDTHKCTIELTNFDGNMGKVLIEDALDIPRSI 736
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TIIS + WPNG+TLD+ +R+Y+ D
Sbjct: 737 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVRKRIYWVDG 794
Query: 258 KLDFIDCKSLE--IKTNVNYSTIFRK-----------LYWID 286
KL+ I + + + + YST + + +YW D
Sbjct: 795 KLNVISSANYDGSQRRQILYSTEYLRHPFSISTFEDYIYWTD 836
>gi|296479644|tpg|DAA21759.1| TPA: low density lipoprotein receptor-related protein 4 [Bos
taurus]
Length = 1891
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 161/537 (29%), Positives = 235/537 (43%), Gaps = 111/537 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 323 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCSVNNGGCAQKCQMVRGAIQCTCHT 382
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 383 GYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALG-PEPV 441
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 442 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 501
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 502 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 561
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 562 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 619
Query: 260 DFIDCKSLE-------IKTNVNYS---TIFR-KLYWIDEGGNGV---------------- 292
I+ +L+ I + + T+F LYW D +
Sbjct: 620 HVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRN 679
Query: 293 ----PLKI----------GKA----NMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
P+ I GK N G L SGQ Y G S+ C
Sbjct: 680 KLHFPMDIHTLHPQRQPAGKNRCGDNNGGCTHLCLPSGQNYTCAC---PTGFRKISSHAC 736
Query: 335 TRWL-FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR--RVYFADSKLDF 391
+ L + + I RI D + S + + + LD +R VY+ D D
Sbjct: 737 AQSLDKFLLFARRMDIRRISFDTEDLSDDVIPLADVRSAVALDWDSRDDHVYWTDVSTDT 796
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPA-LALDLENGMLYYSTEGAEFLK 447
I +DGTG Q +++D +E PA LA+D LY++ G + ++
Sbjct: 797 ISRAKWDGTG--QEVVVDTSLE----------SPAGLAIDWATNKLYWTDAGTDRIE 841
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 156/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1312 KCGPRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPAPETYLLFSSRGSIRRISLDT 1371
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1372 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1421
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1422 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1481
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1482 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1537
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A++ G +LVS + AL
Sbjct: 1538 --------------------------------RIESADLSGKLRQVLVS-HVSHPFALTQ 1564
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1565 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1595
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 139/326 (42%), Gaps = 91/326 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----------- 126
G C+ +C + +Y C+C G+ + +H C FL+ + R I
Sbjct: 707 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTEDLS 763
Query: 127 ----------------------------LVADLEEKGK-DHRAQDIVV-SGLDLVEGLAY 156
+ D + K D Q++VV + L+ GLA
Sbjct: 764 DDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAI 823
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW +YW D+ +RIEV + +G+ R VL +N+ +PR ++++P G +++WTDWG +
Sbjct: 824 DWATNKLYWTDAGTDRIEVANTDGSMRTVLLWENLDRPRDIVVEPMGG--YMYWTDWGAS 881
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD S R IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 882 PKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF------- 929
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
A +DGS +L+ QL L L +Y
Sbjct: 930 ----------------------AGLDGSKRKVLIGSQLPHPFGLTLYGERIY-------- 959
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G +R T+
Sbjct: 960 ---WTDWQTKSIQSADRLTGLDRETL 982
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 125/248 (50%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMC------ 84
C + G CS+ C P P G CTCP G + D TC PG S +
Sbjct: 1006 CATENGGCSHLCLRSPNPSGFSCTCPTGINVMPDGKTCS-------PGMNSFLIFARRID 1058
Query: 85 ---TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR--HSILVADLEEKGKDHR 139
+ Y + N ++ + S+ H I A L+ G H
Sbjct: 1059 IRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGRVYWSDSTLHRISRARLD--GSQH- 1115
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+D++ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1116 -EDLITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1174
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGE+ ++ER GMDGS+R+ +I++ + WPNGLT+D A+ ++ +AD+
Sbjct: 1175 YHEMG--FMYWTDWGEHAKLERSGMDGSDRAVLINSNLGWPNGLTVDKASSQLLWADAHT 1232
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1233 ERIEAADL 1240
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 106/226 (46%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DP+P T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1345 GKTCDPAPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1400
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1401 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1456
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1457 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1507
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + G RQ ++
Sbjct: 1508 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLSGKLRQVLV 1553
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D RI R +DGS +I+T + +GL
Sbjct: 1072 VVVPINITMKNTIAIGVDPQEGRVYWSD-STLHRISRARLDGSQHEDLITTGLQTTDGLA 1130
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1131 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1156
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGE+ ++ER GMDGS+R+ +I+
Sbjct: 1157 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGEHAKLERSGMDGSDRAVLIN 1207
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ + WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1208 SNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1249
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 116/298 (38%), Gaps = 41/298 (13%)
Query: 129 ADLEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
A LE G D + +++ S L GL D + W D+ RIE D NG NR L
Sbjct: 1190 AKLERSGMDGSDRAVLINSNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1249
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P G+ L + +++WTDW + I R D S +I + P + +
Sbjct: 1250 SP-VQHPYGLTLLDA----YIYWTDW-QTRSIHR--ADKGTGSNVILVRSNLPGLMDIQA 1301
Query: 248 ATRRVYFADSKLDFID--CKSLEIKTNVNYSTIFRKLYWIDEGGN--------------- 290
R +K + C L + +S + G
Sbjct: 1302 VDRSQPLGVNKCGPRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPAPETYLLFSSR 1361
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENPR 348
G +I D ++ + V +L ++LD + +G +YY+ +
Sbjct: 1362 GSIRRISLDTSDHTDVHVPVP-ELNNVISLDYDSVDGKVYYTDVFLD------------V 1408
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I R ++GSN T+I + +GL +D R +Y+ D+ + I+ DG+ R+ +I
Sbjct: 1409 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLI 1466
>gi|327259681|ref|XP_003214664.1| PREDICTED: low-density lipoprotein receptor-related protein 4-like
[Anolis carolinensis]
Length = 1907
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/419 (31%), Positives = 188/419 (44%), Gaps = 95/419 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC +G+DE P + C G C+ C T CTC
Sbjct: 329 RCIGQRKLCNGANDCGDGSDESPDQNCRPRTGEENCNLNNGGCAQKCQMTRGTVQCTCHT 388
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI------ 111
G L D +CQD+NEC + GYCSQ CTN++G + C C +GY L D +CKA+
Sbjct: 389 GYRLLEDGRSCQDVNECAEEGYCSQGCTNSEGGFQCWCEQGYELRPDKRSCKALGPEPVL 448
Query: 112 -------------NHSAAFLIISNRHSILVADLEEKGK------------------DHRA 140
+ S L+++N + + D +
Sbjct: 449 LFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHNKELVFWSDVTLDRIMRANLNGSNV 508
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+++V +GL+ GLA DWI ++W DS +RIEV + +GT+R VL N+ +PR + L
Sbjct: 509 EEVVSTGLESPGGLAVDWIHDKLFWTDSGTSRIEVANLDGTHRKVLLWQNLEKPRAIALH 568
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P GT ++WTDWG PRIE MDGSNR I T ++WPNGLT+D A R+Y+ D+K
Sbjct: 569 PMEGT--IYWTDWGNTPRIEYSNMDGSNRRIIADTHLFWPNGLTIDYAGHRMYWVDAKHH 626
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
I+ +A++DG N ++S L A+
Sbjct: 627 VIE----------------------------------RADLDGQNRKAVISQGLPHPFAI 652
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ LY WTDW G N+ II K+++P +DI T
Sbjct: 653 TVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 695
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 159/343 (46%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1318 KCGMRNGGCSHLCLPNPEGFSCACPTGIKLKTDERTCDPSPETYLLFSSRGSIRRISLDT 1377
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K I ++ FL + R + +++E
Sbjct: 1378 SDHTDVHVPVPELNNVISLDYDSVDGK-IYYTDVFLDVIRRADLNGSNMET--------- 1427
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IEV +G+ R VL +++ +PR + + P
Sbjct: 1428 VIGQGLKTTDGLAVDWVARNLYWTDTGRNTIEVARLDGSCRKVLINNSLDEPRAIAVFPR 1487
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I++ + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1488 KG--YLFWTDWGHVAKIERANLDGSERKILINSDLGWPNGLTLDYDTRRIYWVDAHLD-- 1543
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS Q+ AL
Sbjct: 1544 --------------------------------RIESADLNGKLRQVLVS-QVSHPFALTQ 1570
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RWL+WTDW + I+R+ G N+ T+++
Sbjct: 1571 QD-----------RWLYWTDW-KTKSIQRVDKYSGRNKETVLA 1601
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 121/244 (49%), Gaps = 18/244 (7%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C G CS+ C P P G CTCP G L D TC PG S + +
Sbjct: 1012 CSVNNGGCSHLCLLAPLPKGHTCTCPTGINLQPDGKTCL-------PGMTSFLIFARRAD 1064
Query: 91 -YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRA------QDI 143
+ S + Y + + ++ A + + +D + A +DI
Sbjct: 1065 IRLVSLDIPYFADVVISVNMTMKNTIAIGVDPQEGKVYWSDSTLRKISRAALDGSQYEDI 1124
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ +GL +GLA D IG +YW D+ +NRIEV + +G+ R VL +N+ PR + L
Sbjct: 1125 ITTGLQTTDGLAVDAIGRKVYWTDTGINRIEVGNLDGSMRKVLIWENLDSPRAIALYHEM 1184
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +++WTDWGEN ++ER GMDGSNR +I+ + WPNGL +D A ++ +AD+ + I+
Sbjct: 1185 G--FMYWTDWGENAKLERAGMDGSNRMVLINNNLGWPNGLAVDKAGSQLLWADAHTERIE 1242
Query: 264 CKSL 267
L
Sbjct: 1243 AADL 1246
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 137/326 (42%), Gaps = 91/326 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR-------------- 123
G C+ +C +Y C+C G+ + +HTC FL+ + R
Sbjct: 713 GGCTHLCLPNNKAYTCACPTGF-RKTSSHTCA--QSLDKFLLFARRMDIRRISFDTEDLS 769
Query: 124 ---------HSILVADLEEKGK-----------------DHRAQDIVV-SGLDLVEGLAY 156
S + D + K D Q++V S L+ GLA
Sbjct: 770 DDVIPLADVRSAVALDWDAKDDYVYWTDVSTDSISRAKWDGTGQEVVADSSLESPAGLAI 829
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +GT R VL +N+ +PR +++DP G +++WTDWG N
Sbjct: 830 DWVTNKLYWTDAGTDRIEVSNTDGTMRTVLIWENLDRPRDIVVDPVGG--FMYWTDWGAN 887
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IE GMD S R IIS+ + WPNGL +D ++R+Y+AD+ + I+
Sbjct: 888 PKIECAGMDASGRLVIISSNLTWPNGLAIDYESQRLYWADAGMKTIE------------- 934
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
A +DGS+ +L+ L L LY S
Sbjct: 935 ---------------------YAGLDGSDRRVLIGSNLPHPFGL-----TLYGSR----- 963
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
+FWTDW G +R T+
Sbjct: 964 -IFWTDWQAKSIQSADKRTGEDRETL 988
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 152/361 (42%), Gaps = 88/361 (24%)
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
A++ + + L+ ++ H+ + + G + R ++S + GL + +IYW D +
Sbjct: 1223 AVDKAGSQLLWADAHTERIEAADLNGANRRT---LLSPVQHPYGLTL--LDSYIYWTDWQ 1277
Query: 170 LNRIEVCDENGTNRIVLAKDNITQ------------------------------------ 193
I D+N ++L + N+
Sbjct: 1278 TRSIHRADKNTGENVILVRANLPGLMDIQAVDRERPLGANKCGMRNGGCSHLCLPNPEGF 1337
Query: 194 ----PRGMML-------DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI---------- 232
P G+ L DPSP T LF I RI +D S+ + +
Sbjct: 1338 SCACPTGIKLKTDERTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNV 1393
Query: 233 -------ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
+ KIY+ + + LD+ RR S ++ + + L+ + + R LYW
Sbjct: 1394 ISLDYDSVDGKIYYTD-VFLDV-IRRADLNGSNMETVIGQGLKTTDGLAVDWVARNLYWT 1451
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
D G N + + A +DGS +L++ L E A+ + +LFWTDWG
Sbjct: 1452 DTGRNTIEV----ARLDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGH 1498
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+IER +DGS R +I++ + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ +
Sbjct: 1499 VAKIERANLDGSERKILINSDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVL 1558
Query: 406 I 406
+
Sbjct: 1559 V 1559
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 135/331 (40%), Gaps = 94/331 (28%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G CS +C + C+C G L+ D TC + +FLI + R
Sbjct: 1017 GGCSHLCLLAPLPKGHTCTCPTGINLQPDGKTC--LPGMTSFLIFARR------------ 1062
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
DI + LD+ Y+ D V+ N+T
Sbjct: 1063 -----ADIRLVSLDIP------------YFAD-----------------VVISVNMTMKN 1088
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ + P ++W+D +I R +DGS II+T + +GL +D
Sbjct: 1089 TIAIGVDPQEGKVYWSD-STLRKISRAALDGSQYEDIITTGLQTTDGLAVD--------- 1138
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
I RK+YW D G N +I N+DGS +L+ L
Sbjct: 1139 ---------------------AIGRKVYWTDTGIN----RIEVGNLDGSMRKVLIWENLD 1173
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
A+ L + M + ++WTDWGEN ++ER GMDGSNR +I+ + WPNGL +
Sbjct: 1174 SPRAIALYHEMGF---------MYWTDWGENAKLERAGMDGSNRMVLINNNLGWPNGLAV 1224
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
D A ++ +AD+ + I+ + +G R+ ++
Sbjct: 1225 DKAGSQLLWADAHTERIEAADLNGANRRTLL 1255
>gi|351697368|gb|EHB00287.1| Low-density lipoprotein receptor-related protein 4 [Heterocephalus
glaber]
Length = 1939
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 161/537 (29%), Positives = 234/537 (43%), Gaps = 111/537 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC +G+DE P C G C+ C CTC
Sbjct: 357 RCIGQRKLCNGLNDCGDGSDESPQQHCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHT 416
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D CQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 417 GYRLTEDGRACQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALG-PEPV 475
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 476 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 535
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 536 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 595
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 596 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 653
Query: 260 DFIDCKSLE-------IKTNVNYS---TIFR-KLYWIDEGGNGV---------------- 292
I+ +L+ I + + T+F LYW D +
Sbjct: 654 HVIERANLDGSRRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRN 713
Query: 293 ----PLKI----------GKA----NMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
P+ I GK N G L SGQ Y G S+ C
Sbjct: 714 KLHFPMDIHTLHPQRQPAGKNRCGDNNGGCTHLCLPSGQNYTCAC---PTGFRKISSHAC 770
Query: 335 TRWL-FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR--RVYFADSKLDF 391
+ L + + I RI D + S + + + LD +R VY+ D D
Sbjct: 771 AQSLDKFLLFARRMDIRRISFDTEDLSDDVIPLADVRSAVALDWDSRDDHVYWTDVSTDT 830
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPA-LALDLENGMLYYSTEGAEFLK 447
I +DGTG Q +++D +E PA LA+D LY++ G + ++
Sbjct: 831 ISRAKWDGTG--QEVVVDTSLE----------SPAGLAIDWVTNKLYWTDAGTDRIE 875
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 159/345 (46%), Gaps = 69/345 (20%)
Query: 30 LAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCT 85
L +C + G CS+ C P P G C CP G L D TC E G ++
Sbjct: 1344 LNKCGSRNGGCSHLCLPRPSGFSCACPTGIQLKADGKTCDPSPETYLLFSSRGSIRRISL 1403
Query: 86 NTKGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRA 140
+T + N L+YD+ K + ++ FL + R ++ +++E
Sbjct: 1404 DTSDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRANLNGSNMET------- 1455
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + +
Sbjct: 1456 --VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVF 1513
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1514 PRKG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD 1571
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
+I A+++G +LVS + AL
Sbjct: 1572 ----------------------------------RIESADLNGKLRQVLVS-HVSHPFAL 1596
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G ++ T+++
Sbjct: 1597 TQQD-----------RWIYWTDW-QTKSIQRVDKYSGRSKETVLA 1629
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 115/227 (50%), Gaps = 48/227 (21%)
Query: 137 DHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D Q++VV + L+ GLA DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR
Sbjct: 837 DGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPR 896
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
++++P G +++WTDWG +P+IER GMD S+R IIS+ + WPNGL +D ++R+Y+A
Sbjct: 897 DIVVEPMGG--YMYWTDWGASPKIERAGMDASSRQVIISSNLTWPNGLAIDYGSQRLYWA 954
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ + K++E A +DGSN +L+ QL
Sbjct: 955 DAGM-----KTIEF-----------------------------AGLDGSNRKVLIGSQLP 980
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
L L +Y WTDW + G +R T+
Sbjct: 981 HPFGLTLYGERIY-----------WTDWQTKSIQSADRLTGLDRGTL 1016
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 121/248 (48%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMC------ 84
C + G CS+ C P P G CTCP G L + C PG S +
Sbjct: 1040 CATENGGCSHLCLRSPNPSGFSCTCPTGINLLPNGKKCS-------PGMNSFLIFARRID 1092
Query: 85 ---TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR--HSILVADLEEKGKDHR 139
+ Y + N ++ A + S+ H I A+L+ G H
Sbjct: 1093 VRMVSLDIPYFADVVVPINITMKNTIAIGVDPEAGKVYWSDSTLHRISRANLD--GSWH- 1149
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GL D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1150 -EDIITTGLQTTDGLTVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1208
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G ++WTDWGEN ++ER MDGS R+ +I+ + WPNGLT+D A+ ++ +AD+
Sbjct: 1209 YHEMGL--MYWTDWGENAKLERASMDGSERTVLINNNLGWPNGLTVDKASSQLLWADAHT 1266
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1267 ERIEAADL 1274
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 139/344 (40%), Gaps = 94/344 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G C+ +C + +Y C+C G+ + +H C FL+ + R I + +
Sbjct: 741 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTED-- 795
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
D V+ D+ +A DW DSR + +
Sbjct: 796 --LSDDVIPLADVRSAVALDW--------DSRDDHV------------------------ 821
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+WTD + I R DG+ + ++ T + P GL +D T
Sbjct: 822 -----------YWTDVSTDT-ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTN------- 862
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KLYW D G + +I AN DGS ++L+ L
Sbjct: 863 -----------------------KLYWTDAGTD----RIEVANTDGSMRTVLIWENLDRP 895
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
+ +E Y ++WTDWG +P+IER GMD S+R IIS+ + WPNGL +D
Sbjct: 896 RDIVVEPMGGY---------MYWTDWGASPKIERAGMDASSRQVIISSNLTWPNGLAIDY 946
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++R+Y+AD+ + I+F DG+ R+ +I L F L G+
Sbjct: 947 GSQRLYWADAGMKTIEFAGLDGSNRKVLIGSQLPHPFGLTLYGE 990
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1379 GKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1434
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1435 YTDVFLDVIRRANLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1490
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1491 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1541
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1542 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1587
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 48/224 (21%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D RI R +DGS II+T + +GLT
Sbjct: 1106 VVVPINITMKNTIAIGVDPEAGKVYWSD-STLHRISRANLDGSWHEDIITTGLQTTDGLT 1164
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1165 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1190
Query: 305 NASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
+LV L A+ L E G++Y WTDWGEN ++ER MDGS R+ +
Sbjct: 1191 MRKVLVWQNLDSPRAIVLYHEMGLMY-----------WTDWGENAKLERASMDGSERTVL 1239
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I+ + WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1240 INNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGGSRHTLV 1283
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 131 LEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D ++ +++S L GLA D+ +YW D+ + IE +G+NR VL
Sbjct: 918 IERAGMDASSRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSNRKVLIGS 977
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI 232
+ P G+ L G R ++WTDW + G +R T+
Sbjct: 978 QLPHPFGLTL---YGER-IYWTDWQTKSIQSADRLTGLDRGTL 1016
>gi|390179013|ref|XP_003736780.1| GA27443, isoform D [Drosophila pseudoobscura pseudoobscura]
gi|388859677|gb|EIM52853.1| GA27443, isoform D [Drosophila pseudoobscura pseudoobscura]
Length = 923
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 173/342 (50%), Gaps = 67/342 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ L++VCD + DCP+G DE G C + EC K G C + C +G C C G LS
Sbjct: 335 QCIALSRVCDKRKDCPDGEDEPAGKCGVNECASKNGGCMHHCVDLAVGHRCECHEGYKLS 394
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D TC D++ECE PG CSQ+C N G + C C GY+ + NHT CKA A L+++
Sbjct: 395 GDKRTCVDIDECENPGTCSQLCINEIGGFKCECEAGYMRDPRNHTRCKA-GEGHASLLLA 453
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 454 RRH-----DIRKIALDHMEMTSIVNSTKSATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 508
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + +G VL +D + PR +
Sbjct: 509 NEKTVVLKQSSVTSDGLAVDWIYNHVYYTDTHKCTIELTNFDGNMGKVLIEDALDIPRSI 568
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TIIS + WPNG+TLD+ +R+Y+ D
Sbjct: 569 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVRKRIYWVDG 626
Query: 258 KLDFIDCKSLE--IKTNVNYSTIFRK-----------LYWID 286
KL+ I + + + + YST + + +YW D
Sbjct: 627 KLNVISSANYDGSQRRQILYSTEYLRHPFSISTFEDYIYWTD 668
>gi|449681620|ref|XP_002155685.2| PREDICTED: low-density lipoprotein receptor-related protein 1B-like
[Hydra magnipapillata]
Length = 891
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/319 (36%), Positives = 167/319 (52%), Gaps = 53/319 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C++ VCD K+DCPNG DE C + EC+H G CS+ C +G +C+C PG LSND
Sbjct: 307 CIDWKNVCDKKSDCPNGEDESNSCYINECEHYNGDCSHICTNLKIGYVCSCKPGYTLSND 366
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR- 123
TC+D+NECE G C Q+C NT GSY CSC E YV++ D +CK + ++ +NR
Sbjct: 367 GRTCEDINECEIHGSCHQICHNTNGSYYCSCAENYVMQLDKVSCKT--NVEGWIYFANRR 424
Query: 124 -----------HSILVADLEEK---------------------------GKDHRAQDIVV 145
+ I V LE G + +++V
Sbjct: 425 DIRKFSLSGHEYDIAVNGLEGAVSIDFDVHNNFIYWTDVVQETINRAIIGSNQMRPEVLV 484
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GLA DW+ G +YW D+ IEV D +G N L ++ +PR + LDP G
Sbjct: 485 KNTHTSDGLAVDWLTGKLYWTDAGYKTIEVADLSGKNNADLVTIDLLEPRAISLDPFEG- 543
Query: 206 RWLFWTDWGENPRIERIGMDGSN--RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+++W+DWG++ I RI MDG+ R +I+ I WPNGLTLD+ R++Y+ +KL
Sbjct: 544 -FIYWSDWGDSAVISRISMDGNKETRKSIVDKDIIWPNGLTLDLIQRKLYWICAKL---- 598
Query: 264 CKSLEIKTNVNYSTIFRKL 282
K LE+ ++++ RKL
Sbjct: 599 -KRLEV---IDFNGKNRKL 613
>gi|440903451|gb|ELR54106.1| Low-density lipoprotein receptor-related protein 4, partial [Bos
grunniens mutus]
Length = 1898
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 159/536 (29%), Positives = 233/536 (43%), Gaps = 109/536 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 316 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCSVNNGGCAQKCQMVRGAIQCTCHT 375
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 376 GYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALG-PEPV 434
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 435 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 494
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 495 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 554
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 555 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 612
Query: 260 DFIDCKSLE-------IKTNVNYS---TIFR-KLYWIDEGGNGV---------------- 292
I+ +L+ I + + T+F LYW D +
Sbjct: 613 HVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRN 672
Query: 293 ----PLKI----------GKA----NMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
P+ I GK N G L SGQ Y G S+ C
Sbjct: 673 KLHFPMDIHTLHPQRQPAGKNRCGDNNGGCTHLCLPSGQNYTCAC---PTGFRKISSHAC 729
Query: 335 TRWL-FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR--RVYFADSKLDF 391
+ L + + I RI D + S + + + LD +R VY+ D D
Sbjct: 730 AQSLDKFLLFARRMDIRRISFDTEDLSDDVIPLADVRSAVALDWDSRDDHVYWTDVSTDT 789
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I +DGTG Q +++D +E LA+D LY++ G + ++
Sbjct: 790 ISRAKWDGTG--QEVVVDTSLE---------SPAGLAIDWATNKLYWTDAGTDRIE 834
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 156/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1305 KCGPRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPAPETYLLFSSRGSIRRISLDT 1364
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1365 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1414
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1415 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1474
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1475 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1530
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A++ G +LVS + AL
Sbjct: 1531 --------------------------------RIESADLSGKLRQVLVS-HVSHPFALTQ 1557
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1558 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1588
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 139/326 (42%), Gaps = 91/326 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----------- 126
G C+ +C + +Y C+C G+ + +H C FL+ + R I
Sbjct: 700 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTEDLS 756
Query: 127 ----------------------------LVADLEEKGK-DHRAQDIVV-SGLDLVEGLAY 156
+ D + K D Q++VV + L+ GLA
Sbjct: 757 DDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAI 816
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW +YW D+ +RIEV + +G+ R VL +N+ +PR ++++P G +++WTDWG +
Sbjct: 817 DWATNKLYWTDAGTDRIEVANTDGSMRTVLLWENLDRPRDIVVEPMGG--YMYWTDWGAS 874
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD S R IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 875 PKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF------- 922
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
A +DGS +L+ QL L L +Y
Sbjct: 923 ----------------------AGLDGSKRKVLIGSQLPHPFGLTLYGERIY-------- 952
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G +R T+
Sbjct: 953 ---WTDWQTKSIQSADRLTGLDRETL 975
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 125/248 (50%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMC------ 84
C + G CS+ C P P G CTCP G + D TC PG S +
Sbjct: 999 CATENGGCSHLCLRSPNPSGFSCTCPTGINVMPDGKTCS-------PGMNSFLIFARRID 1051
Query: 85 ---TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR--HSILVADLEEKGKDHR 139
+ Y + N ++ + S+ H I A L+ G H
Sbjct: 1052 IRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGRVYWSDSTLHRISRARLD--GSQH- 1108
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+D++ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1109 -EDLITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1167
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGE+ ++ER GMDGS+R+ +I++ + WPNGLT+D A+ ++ +AD+
Sbjct: 1168 YHEMG--FMYWTDWGEHAKLERSGMDGSDRAVLINSNLGWPNGLTVDKASSQLLWADAHT 1225
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1226 ERIEAADL 1233
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 106/226 (46%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DP+P T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1338 GKTCDPAPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1393
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1394 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1449
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1450 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1500
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + G RQ ++
Sbjct: 1501 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLSGKLRQVLV 1546
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D RI R +DGS +I+T + +GL
Sbjct: 1065 VVVPINITMKNTIAIGVDPQEGRVYWSD-STLHRISRARLDGSQHEDLITTGLQTTDGLA 1123
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1124 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1149
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGE+ ++ER GMDGS+R+ +I+
Sbjct: 1150 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGEHAKLERSGMDGSDRAVLIN 1200
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ + WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1201 SNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1242
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 116/298 (38%), Gaps = 41/298 (13%)
Query: 129 ADLEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
A LE G D + +++ S L GL D + W D+ RIE D NG NR L
Sbjct: 1183 AKLERSGMDGSDRAVLINSNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1242
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P G+ L + +++WTDW + I R D S +I + P + +
Sbjct: 1243 SP-VQHPYGLTLLDA----YIYWTDW-QTRSIHR--ADKGTGSNVILVRSNLPGLMDIQA 1294
Query: 248 ATRRVYFADSKLDFID--CKSLEIKTNVNYSTIFRKLYWIDEGGN--------------- 290
R +K + C L + +S + G
Sbjct: 1295 VDRSQPLGVNKCGPRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPAPETYLLFSSR 1354
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENPR 348
G +I D ++ + V +L ++LD + +G +YY+ +
Sbjct: 1355 GSIRRISLDTSDHTDVHVPVP-ELNNVISLDYDSVDGKVYYTDVFLD------------V 1401
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I R ++GSN T+I + +GL +D R +Y+ D+ + I+ DG+ R+ +I
Sbjct: 1402 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLI 1459
>gi|118150808|ref|NP_001071311.1| low-density lipoprotein receptor-related protein 4 precursor [Bos
taurus]
gi|92090689|gb|ABE73152.1| low density lipoprotein receptor-related protein 4 [Bos taurus]
Length = 1905
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 161/537 (29%), Positives = 235/537 (43%), Gaps = 111/537 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 323 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCSVNNGGCAQKCQMVRGAIQCTCHT 382
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 383 GYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALG-PEPV 441
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 442 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 501
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 502 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 561
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 562 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 619
Query: 260 DFIDCKSLE-------IKTNVNYS---TIFR-KLYWIDEGGNGV---------------- 292
I+ +L+ I + + T+F LYW D +
Sbjct: 620 HVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRN 679
Query: 293 ----PLKI----------GKA----NMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
P+ I GK N G L SGQ Y G S+ C
Sbjct: 680 KLHFPMDIHTLHPQRQPAGKNRCGDNNGGCTHLCLPSGQNYTCAC---PTGFRKISSHAC 736
Query: 335 TRWL-FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR--RVYFADSKLDF 391
+ L + + I RI D + S + + + LD +R VY+ D D
Sbjct: 737 AQSLDKFLLFARRMDIRRISFDTEDLSDDVIPLADVRSAVALDWDSRDDHVYWTDVSTDT 796
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPA-LALDLENGMLYYSTEGAEFLK 447
I +DGTG Q +++D +E PA LA+D LY++ G + ++
Sbjct: 797 ISRAKWDGTG--QEVVVDTSLE----------SPAGLAIDWATNKLYWTDAGTDRIE 841
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 156/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1312 KCGPRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPAPETYLLFSSRGSIRRISLDT 1371
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1372 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1421
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1422 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1481
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1482 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1537
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A++ G +LVS + AL
Sbjct: 1538 --------------------------------RIESADLSGKLRQVLVS-HVSHPFALTQ 1564
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1565 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1595
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 139/326 (42%), Gaps = 91/326 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----------- 126
G C+ +C + +Y C+C G+ + +H C FL+ + R I
Sbjct: 707 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTEDLS 763
Query: 127 ----------------------------LVADLEEKGK-DHRAQDIVV-SGLDLVEGLAY 156
+ D + K D Q++VV + L+ GLA
Sbjct: 764 DDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAI 823
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW +YW D+ +RIEV + +G+ R VL +N+ +PR ++++P G +++WTDWG +
Sbjct: 824 DWATNKLYWTDAGTDRIEVANTDGSMRTVLLWENLDRPRDIVVEPMGG--YMYWTDWGAS 881
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD S R IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 882 PKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF------- 929
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
A +DGS +L+ QL L L +Y
Sbjct: 930 ----------------------AGLDGSKRKVLIGSQLPHPFGLTLYGERIY-------- 959
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G +R T+
Sbjct: 960 ---WTDWQTKSIQSADRLTGLDRETL 982
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 125/248 (50%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMC------ 84
C + G CS+ C P P G CTCP G + D TC PG S +
Sbjct: 1006 CATENGGCSHLCLRSPNPSGFSCTCPTGINVMPDGKTCS-------PGMNSFLIFARRID 1058
Query: 85 ---TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR--HSILVADLEEKGKDHR 139
+ Y + N ++ + S+ H I A L+ G H
Sbjct: 1059 IRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGRVYWSDSTLHRISRARLD--GSQH- 1115
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+D++ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1116 -EDLITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1174
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGE+ ++ER GMDGS+R+ +I++ + WPNGLT+D A+ ++ +AD+
Sbjct: 1175 YHEMG--FMYWTDWGEHAKLERSGMDGSDRAVLINSNLGWPNGLTVDKASSQLLWADAHT 1232
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1233 ERIEAADL 1240
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 106/226 (46%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DP+P T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1345 GKTCDPAPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1400
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1401 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1456
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1457 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1507
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + G RQ ++
Sbjct: 1508 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLSGKLRQVLV 1553
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D RI R +DGS +I+T + +GL
Sbjct: 1072 VVVPINITMKNTIAIGVDPQEGRVYWSD-STLHRISRARLDGSQHEDLITTGLQTTDGLA 1130
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1131 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1156
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGE+ ++ER GMDGS+R+ +I+
Sbjct: 1157 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGEHAKLERSGMDGSDRAVLIN 1207
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ + WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1208 SNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1249
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 116/298 (38%), Gaps = 41/298 (13%)
Query: 129 ADLEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
A LE G D + +++ S L GL D + W D+ RIE D NG NR L
Sbjct: 1190 AKLERSGMDGSDRAVLINSNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1249
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P G+ L + +++WTDW + I R D S +I + P + +
Sbjct: 1250 SP-VQHPYGLTLLDA----YIYWTDW-QTRSIHR--ADKGTGSNVILVRSNLPGLMDIQA 1301
Query: 248 ATRRVYFADSKLDFID--CKSLEIKTNVNYSTIFRKLYWIDEGGN--------------- 290
R +K + C L + +S + G
Sbjct: 1302 VDRSQPLGVNKCGPRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPAPETYLLFSSR 1361
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENPR 348
G +I D ++ + V +L ++LD + +G +YY+ +
Sbjct: 1362 GSIRRISLDTSDHTDVHVPVP-ELNNVISLDYDSVDGKVYYTDVFLD------------V 1408
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I R ++GSN T+I + +GL +D R +Y+ D+ + I+ DG+ R+ +I
Sbjct: 1409 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLI 1466
>gi|157384998|ref|NP_002325.2| low-density lipoprotein receptor-related protein 4 precursor [Homo
sapiens]
gi|269849756|sp|O75096.4|LRP4_HUMAN RecName: Full=Low-density lipoprotein receptor-related protein 4;
Short=LRP-4; AltName: Full=Multiple epidermal growth
factor-like domains 7; Flags: Precursor
Length = 1905
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 191/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 323 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHT 382
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 383 GYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYELRPDRRSCKALG-PEPV 441
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 442 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 501
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 502 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 561
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 562 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 619
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 620 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 645
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 646 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 689
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1312 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1371
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1372 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1421
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1422 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1481
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1482 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1537
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1538 --------------------------------RIESADLNGKLRQVLVS-HVSHPFALTQ 1564
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1565 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1595
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 129/248 (52%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L +D TC PG S + +
Sbjct: 1006 CAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCS-------PGMNSFLIFARRID 1058
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S H I A+L+ G H
Sbjct: 1059 IRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHRISRANLD--GSQH- 1115
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1116 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1174
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D A+ ++ +AD+
Sbjct: 1175 YHEMG--FMYWTDWGENAKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHT 1232
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1233 ERIEAADL 1240
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 48/227 (21%)
Query: 137 DHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D Q++VV + L+ GLA DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR
Sbjct: 803 DGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPR 862
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
++++P G +++WTDWG +P+IER GMD S R IIS+ + WPNGL +D ++R+Y+A
Sbjct: 863 DIVVEPMGG--YMYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWA 920
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ + K++E A +DGS +L+ QL
Sbjct: 921 DAGM-----KTIEF-----------------------------AGLDGSKRKVLIGSQLP 946
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
L L +Y WTDW + G +R T+
Sbjct: 947 HPFGLTLYGERIY-----------WTDWQTKSIQSADRLTGLDRETL 982
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 138/344 (40%), Gaps = 94/344 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G C+ +C + +Y C+C G+ + +H C FL+ + R I + +
Sbjct: 707 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTED-- 761
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
D V+ D+ +A DW DSR + +
Sbjct: 762 --LSDDVIPLADVRSAVALDW--------DSRDDHV------------------------ 787
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+WTD + I R DG+ + ++ T + P GL +D T
Sbjct: 788 -----------YWTDVSTDT-ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTN------- 828
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KLYW D G + +I AN DGS ++L+ L
Sbjct: 829 -----------------------KLYWTDAGTD----RIEVANTDGSMRTVLIWENLDRP 861
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
+ +E Y ++WTDWG +P+IER GMD S R IIS+ + WPNGL +D
Sbjct: 862 RDIVVEPMGGY---------MYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDY 912
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++R+Y+AD+ + I+F DG+ R+ +I L F L G+
Sbjct: 913 GSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQLPHPFGLTLYGE 956
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1345 GKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1400
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1401 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1456
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1457 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1507
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1508 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1553
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 106/222 (47%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D RI R +DGS II+T + +GL
Sbjct: 1072 VVVPINITMKNTIAIGVDPQEGKVYWSD-STLHRISRANLDGSQHEDIITTGLQTTDGLA 1130
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1131 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1156
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+
Sbjct: 1157 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRAVLIN 1207
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1208 NNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1249
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 139/334 (41%), Gaps = 52/334 (15%)
Query: 131 LEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + +++S L GLA D+ +YW D+ + IE +G+ R VL
Sbjct: 884 IERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGS 943
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
+ P G+ L G R ++WTDW + G +R T+ N + + +
Sbjct: 944 QLPHPFGLTL---YGER-IYWTDWQTKSIQSADRLTGLDRETLQEN---LENLMDIHVFH 996
Query: 250 RRVYFADS--KLDFIDCKSLEIKT--NVNYS-TIFRKLYWIDEGGNGVP----------- 293
RR + ++ C L +++ +S T + + +G P
Sbjct: 997 RRRPPVSTPCAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCSPGMNSFLIFARR 1056
Query: 294 LKIGKANMD---GSNASILVSGQLYEALAL--DLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ I ++D ++ + ++ + +A+ D + G +Y+S R
Sbjct: 1057 IDIRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHR------------ 1104
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I R +DGS II+T + +GL +D R+VY+ D+ + I+ N DG+ R+ ++
Sbjct: 1105 ISRANLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQ 1164
Query: 409 DLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+L + A+ L E G +Y++ G
Sbjct: 1165 NL-----------DSPRAIVLYHEMGFMYWTDWG 1187
>gi|410265850|gb|JAA20891.1| low density lipoprotein receptor-related protein 4 [Pan
troglodytes]
Length = 1905
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 191/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 323 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHT 382
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 383 GYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYELRPDRRSCKALG-PEPV 441
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 442 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 501
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 502 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 561
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 562 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 619
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 620 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 645
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 646 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 689
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1312 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1371
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1372 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1421
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1422 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1481
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1482 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1537
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1538 --------------------------------RIESADLNGKLRQVLVS-HVSHPFALTQ 1564
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1565 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1595
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 129/248 (52%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L +D TC PG S + +
Sbjct: 1006 CAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCS-------PGMNSFLIFARRID 1058
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S H I A+L+ G H
Sbjct: 1059 IRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHRISRANLD--GSQH- 1115
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1116 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1174
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D A+ ++ +AD+
Sbjct: 1175 YHEMG--FMYWTDWGENAKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHT 1232
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1233 ERIEAADL 1240
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 48/227 (21%)
Query: 137 DHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D Q++VV + L+ GLA DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR
Sbjct: 803 DGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPR 862
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
++++P G +++WTDWG +P+IER GMD S R IIS+ + WPNGL +D ++R+Y+A
Sbjct: 863 DIVVEPMGG--YMYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWA 920
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ + K++E A +DGS +L+ QL
Sbjct: 921 DAGM-----KTIEF-----------------------------AGLDGSKRKVLIGSQLP 946
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
L L +Y WTDW + G +R T+
Sbjct: 947 HPFGLTLYGERIY-----------WTDWQTKSIQSADRLTGLDRETL 982
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 138/344 (40%), Gaps = 94/344 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G C+ +C + +Y C+C G+ + +H C FL+ + R I + +
Sbjct: 707 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTED-- 761
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
D V+ D+ +A DW DSR + +
Sbjct: 762 --LSDDVIPLADVRSAVALDW--------DSRDDHV------------------------ 787
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+WTD + I R DG+ + ++ T + P GL +D T
Sbjct: 788 -----------YWTDVSTDT-ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTN------- 828
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KLYW D G + +I AN DGS ++L+ L
Sbjct: 829 -----------------------KLYWTDAGTD----RIEVANTDGSMRTVLIWENLDRP 861
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
+ +E Y ++WTDWG +P+IER GMD S R IIS+ + WPNGL +D
Sbjct: 862 RDIVVEPMGGY---------MYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDY 912
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++R+Y+AD+ + I+F DG+ R+ +I L F L G+
Sbjct: 913 GSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQLPHPFGLTLYGE 956
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1345 GKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1400
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1401 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1456
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1457 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1507
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1508 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1553
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 106/222 (47%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D RI R +DGS II+T + +GL
Sbjct: 1072 VVVPINITMKNTIAIGVDPQEGKVYWSD-STLHRISRANLDGSQHEDIITTGLQTTDGLA 1130
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1131 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1156
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+
Sbjct: 1157 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRAVLIN 1207
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1208 NNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1249
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 139/334 (41%), Gaps = 52/334 (15%)
Query: 131 LEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + +++S L GLA D+ +YW D+ + IE +G+ R VL
Sbjct: 884 IERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGS 943
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
+ P G+ L G R ++WTDW + G +R T+ N + + +
Sbjct: 944 QLPHPFGLTL---YGER-IYWTDWQTKSIQSADRLTGLDRETLQEN---LENLMDIHVFH 996
Query: 250 RRVYFADS--KLDFIDCKSLEIKT--NVNYS-TIFRKLYWIDEGGNGVP----------- 293
RR + ++ C L +++ +S T + + +G P
Sbjct: 997 RRRPPVSTPCAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCSPGMNSFLIFARR 1056
Query: 294 LKIGKANMD---GSNASILVSGQLYEALAL--DLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ I ++D ++ + ++ + +A+ D + G +Y+S R
Sbjct: 1057 IDIRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHR------------ 1104
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I R +DGS II+T + +GL +D R+VY+ D+ + I+ N DG+ R+ ++
Sbjct: 1105 ISRANLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQ 1164
Query: 409 DLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+L + A+ L E G +Y++ G
Sbjct: 1165 NL-----------DSPRAIVLYHEMGFMYWTDWG 1187
>gi|168273096|dbj|BAG10387.1| low-density lipoprotein receptor-related protein 4 precursor
[synthetic construct]
Length = 1902
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 191/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 323 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHT 382
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 383 GYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYELRPDRRSCKALG-PEPV 441
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 442 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 501
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 502 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 561
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 562 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 619
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 620 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 645
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 646 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 689
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 152/343 (44%), Gaps = 72/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1312 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1371
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1372 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1421
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +
Sbjct: 1422 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDD-----IAAF 1476
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
P +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1477 PRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1534
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LV G + AL
Sbjct: 1535 --------------------------------RIESADLNGKLRQVLV-GHVSHPFALTQ 1561
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1562 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1592
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 129/248 (52%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L +D TC PG S + +
Sbjct: 1006 CAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCS-------PGMNSFLIFARRID 1058
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S H I A+L+ G H
Sbjct: 1059 IRMVSLDIPYFADVVVPINITMKNTIAVGVDPQEGKVYWSDSTLHRISRANLD--GSQH- 1115
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1116 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1174
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D A+ ++ +AD+
Sbjct: 1175 YHEMG--FMYWTDWGENAKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHT 1232
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1233 ERIEAADL 1240
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 48/227 (21%)
Query: 137 DHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D Q++VV + L+ GLA DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR
Sbjct: 803 DGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPR 862
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
++++P G +++WTDWG +P+IER GMD S R IIS+ + WPNGL +D ++R+Y+A
Sbjct: 863 DIVVEPMGG--YMYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWA 920
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ + K++E A +DGS +L+ QL
Sbjct: 921 DAGM-----KTIEF-----------------------------AGLDGSKRKVLIGSQLP 946
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
L L +Y WTDW + G +R T+
Sbjct: 947 HPFGLTLYGERIY-----------WTDWQTKSIQSADRLTGLDRETL 982
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 138/344 (40%), Gaps = 94/344 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G C+ +C + +Y C+C G+ + +H C FL+ + R I + +
Sbjct: 707 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTED-- 761
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
D V+ D+ +A DW DSR + +
Sbjct: 762 --LSDDVIPLADVRSAVALDW--------DSRDDHV------------------------ 787
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+WTD + I R DG+ + ++ T + P GL +D T
Sbjct: 788 -----------YWTDVSTDT-ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTN------- 828
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KLYW D G + +I AN DGS ++L+ L
Sbjct: 829 -----------------------KLYWTDAGTD----RIEVANTDGSMRTVLIWENLDRP 861
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
+ +E Y ++WTDWG +P+IER GMD S R IIS+ + WPNGL +D
Sbjct: 862 RDIVVEPMGGY---------MYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDY 912
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++R+Y+AD+ + I+F DG+ R+ +I L F L G+
Sbjct: 913 GSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQLPHPFGLTLYGE 956
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 106/226 (46%), Gaps = 35/226 (15%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1345 GKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1400
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1401 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1456
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L + A + +LFWTDWG +IER +DGS R
Sbjct: 1457 LDGSCRKVLINNSLDDIAAFPRKG------------YLFWTDWGHIAKIERANLDGSERK 1504
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1505 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1550
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 106/222 (47%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D RI R +DGS II+T + +GL
Sbjct: 1072 VVVPINITMKNTIAVGVDPQEGKVYWSD-STLHRISRANLDGSQHEDIITTGLQTTDGLA 1130
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1131 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1156
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+
Sbjct: 1157 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRAVLIN 1207
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1208 NNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1249
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 139/334 (41%), Gaps = 52/334 (15%)
Query: 131 LEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + +++S L GLA D+ +YW D+ + IE +G+ R VL
Sbjct: 884 IERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGS 943
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
+ P G+ L G R ++WTDW + G +R T+ N + + +
Sbjct: 944 QLPHPFGLTL---YGER-IYWTDWQTKSIQSADRLTGLDRETLQEN---LENLMDIHVFH 996
Query: 250 RRVYFADS--KLDFIDCKSLEIKT--NVNYS-TIFRKLYWIDEGGNGVP----------- 293
RR + ++ C L +++ +S T + + +G P
Sbjct: 997 RRRPPVSTPCAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCSPGMNSFLIFARR 1056
Query: 294 LKIGKANMD---GSNASILVSGQLYEALA--LDLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ I ++D ++ + ++ + +A +D + G +Y+S R
Sbjct: 1057 IDIRMVSLDIPYFADVVVPINITMKNTIAVGVDPQEGKVYWSDSTLHR------------ 1104
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I R +DGS II+T + +GL +D R+VY+ D+ + I+ N DG+ R+ ++
Sbjct: 1105 ISRANLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQ 1164
Query: 409 DLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+L + A+ L E G +Y++ G
Sbjct: 1165 NL-----------DSPRAIVLYHEMGFMYWTDWG 1187
>gi|444707589|gb|ELW48854.1| Low-density lipoprotein receptor-related protein 4 [Tupaia
chinensis]
Length = 1970
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 155/535 (28%), Positives = 228/535 (42%), Gaps = 107/535 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 389 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHT 448
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI------ 111
G L+ D TCQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 449 GYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALGPEPVL 508
Query: 112 -------------NHSAAFLIISNRHSILVADLEEKGK------------------DHRA 140
+ S L+++N + + D + +
Sbjct: 509 LFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHQRELVFWSDVTLDRILRANLNGSNV 568
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+++V +GL+ GLA DW+ +YW DS +RIEV + NG +R VL N+ +PR + L
Sbjct: 569 EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLNGAHRKVLLWQNLEKPRAIALH 628
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A R+Y+ D+K
Sbjct: 629 PMEGT--IYWTDWGNTPRIEASSMDGSARRIIADTHLFWPNGLTIDYAGHRMYWVDAKHH 686
Query: 261 FIDCKSLE-------IKTNVNYS---TIFR-KLYWIDEGGNGV----------------- 292
I+ +L+ I + + T+F LYW D +
Sbjct: 687 VIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNK 746
Query: 293 ---PLKI----------GKA----NMDGSNASILVSGQLYEALALDLENGMLYYSTLKCT 335
P+ I GK N G L SGQ Y G S+L C
Sbjct: 747 LHFPMDIHTLHPQRQPAGKNRCGDNNGGCTHLCLPSGQNYTCAC---PTGFRKISSLACA 803
Query: 336 RWL-FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR--RVYFADSKLDFI 392
+ L + + I RI D + S + + + LD +R VY+ D D I
Sbjct: 804 QSLDKFLLFARRMDIRRISFDTEDLSDDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTI 863
Query: 393 DFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
+DGTG++ V+ L LA+D LY++ G + ++
Sbjct: 864 SRAKWDGTGQEVVVGTSL-----------ESPAGLAIDWVTNKLYWTDAGTDRIE 907
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 156/345 (45%), Gaps = 70/345 (20%)
Query: 30 LAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCT 85
L +C + G CS+ C P P G C CP G L D TC E G ++
Sbjct: 1376 LNKCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGRTCDPSPETYLLFSSRGSIRRISL 1435
Query: 86 NTKGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRA 140
+T + N L+YD+ K + ++ FL + R + +++E
Sbjct: 1436 DTSDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET------- 1487
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + +
Sbjct: 1488 --VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLVNNSLDEPRAIAVF 1545
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1546 PRKG--YLFWTDWGHIAKIERAHLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD 1603
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
+I A+++G LVS + AL
Sbjct: 1604 ----------------------------------RIESADLNGKLRQGLVS-HVSHPFAL 1628
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
+ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1629 TQD------------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1660
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 48/227 (21%)
Query: 137 DHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D Q++VV + L+ GLA DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR
Sbjct: 869 DGTGQEVVVGTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPR 928
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
++++P G +++WTDWG +P+IER GMD S R IIS+ + WPNGL +D ++R+Y+A
Sbjct: 929 DIVVEPMGG--YMYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWA 986
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ + K++E A +DGS +L+ QL
Sbjct: 987 DAGM-----KTIEF-----------------------------AGLDGSKRKVLIGSQLP 1012
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
L L +Y WTDW + G +R T+
Sbjct: 1013 HPFGLTLYGERIY-----------WTDWQTKSIQSADRLTGMDRETL 1048
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 127/248 (51%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L D TC PG S + +
Sbjct: 1072 CAVENGGCSHLCLRSPNPSGFSCTCPTGINLLPDGKTCS-------PGMNSFLIFARRID 1124
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S H I A L+ G H
Sbjct: 1125 IRMVSLDIPYFADVVVPVNITMKNTIAIGVDPQEGKVYWSDSTLHRISRASLD--GSQH- 1181
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1182 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1240
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D A+ ++ +AD+
Sbjct: 1241 YHEMG--FMYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGLTVDKASSQLLWADAHT 1298
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1299 ERIEAADL 1306
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1411 GRTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1466
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1467 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1522
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +LV+ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1523 LDGSCRKVLVNNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERAHLDGSERK 1573
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1574 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQGLV 1619
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 138/344 (40%), Gaps = 94/344 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G C+ +C + +Y C+C G+ ++++ FL+ + R I + +
Sbjct: 773 GGCTHLCLPSGQNYTCACPTGFRKISSLACAQSLD---KFLLFARRMDIRRISFDTED-- 827
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
D V+ D+ +A DW DSR + +
Sbjct: 828 --LSDDVIPLADVRSAVALDW--------DSRDDHV------------------------ 853
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+WTD + I R DG+ + ++ T + P GL +D T
Sbjct: 854 -----------YWTDVSTD-TISRAKWDGTGQEVVVGTSLESPAGLAIDWVTN------- 894
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KLYW D G + +I AN DGS ++L+ L
Sbjct: 895 -----------------------KLYWTDAGTD----RIEVANTDGSMRTVLIWENLDRP 927
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
+ +E Y ++WTDWG +P+IER GMD S R IIS+ + WPNGL +D
Sbjct: 928 RDIVVEPMGGY---------MYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDY 978
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++R+Y+AD+ + I+F DG+ R+ +I L F L G+
Sbjct: 979 GSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQLPHPFGLTLYGE 1022
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 107/222 (48%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D + RI R +DGS II+T + +GL
Sbjct: 1138 VVVPVNITMKNTIAIGVDPQEGKVYWSDSTLH-RISRASLDGSQHEDIITTGLQTTDGLA 1196
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1197 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1222
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+
Sbjct: 1223 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRTVLIN 1273
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1274 NNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1315
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 140/334 (41%), Gaps = 52/334 (15%)
Query: 131 LEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + +++S L GLA D+ +YW D+ + IE +G+ R VL
Sbjct: 950 IERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGS 1009
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
+ P G+ L G R ++WTDW + G +R T+ + N + + +
Sbjct: 1010 QLPHPFGLTL---YGER-IYWTDWQTKSIQSADRLTGMDRETL---QENLENLMDIHVFH 1062
Query: 250 RRVYFADS--KLDFIDCKSLEIKT--NVNYS-TIFRKLYWIDEGGNGVP----------- 293
RR + ++ C L +++ +S T + + +G P
Sbjct: 1063 RRRPPVSTPCAVENGGCSHLCLRSPNPSGFSCTCPTGINLLPDGKTCSPGMNSFLIFARR 1122
Query: 294 LKIGKANMD---GSNASILVSGQLYEALAL--DLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ I ++D ++ + V+ + +A+ D + G +Y+S R
Sbjct: 1123 IDIRMVSLDIPYFADVVVPVNITMKNTIAIGVDPQEGKVYWSDSTLHR------------ 1170
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I R +DGS II+T + +GL +D R+VY+ D+ + I+ N DG+ R+ ++
Sbjct: 1171 ISRASLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQ 1230
Query: 409 DLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+L + A+ L E G +Y++ G
Sbjct: 1231 NL-----------DSPRAIVLYHEMGFMYWTDWG 1253
>gi|327277862|ref|XP_003223682.1| PREDICTED: low-density lipoprotein receptor-related protein 1-like
[Anolis carolinensis]
Length = 4517
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 137/406 (33%), Positives = 193/406 (47%), Gaps = 92/406 (22%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEIL 61
++C++ +CD DC +G+DE C + EC K CS C +G C C PG L
Sbjct: 2887 NQCISNHLLCDNNNDCGDGSDE-LNCFINECLNKKLSGCSQECEDLKIGYKCRCRPGFRL 2945
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLII 120
+D TC D++EC CSQMC NT GS+ C C +GY+L+ D+ T CKAI FLI
Sbjct: 2946 KDDGKTCIDIDECTTTYPCSQMCINTLGSFKCLCVDGYILKPDDPTSCKAITDEEPFLIF 3005
Query: 121 SNRHSILVADLEEKGK---------------DHRAQDIV--------------------- 144
+NR+ + L+ D+R Q I
Sbjct: 3006 ANRYYLRKLSLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMNINGSNV 3065
Query: 145 ----VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3066 QVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVNSGLREPRALVVD 3125
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
G +L+WTDWG++ I +IGMDG+NRS I+ T+I WPNGLTLD R+Y+AD++ D
Sbjct: 3126 VQNG--YLYWTDWGDHSLIGKIGMDGTNRSVIVDTRITWPNGLTLDYINGRIYWADARED 3183
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
+I+ A++DGSN I++S + AL
Sbjct: 3184 YIE----------------------------------FASLDGSNRHIVLSQDIPHIFAL 3209
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIST 365
L +Y WTDW E I R G+N+S +IST
Sbjct: 3210 TLYEDYIY-----------WTDW-ETKSINRAHKTTGANKSVLIST 3243
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 148/304 (48%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CDL C G CS+ C P G C+CP G L +
Sbjct: 1136 CLPPEKLCDGNDDCGDGSDEGKLCDL--CSLNNGGCSHNCTVAPGEGIACSCPLGMELGS 1193
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K + CSC +G++LE D C++ + F+I SNR
Sbjct: 1194 DNKTCQIQSYCAKHLKCSQKCEQDKYNVKCSCYDGWMLESDGENCRSTDPFKPFIIFSNR 1253
Query: 124 HSILVADLEE------------------------------------KGKDHRA------Q 141
H I DL + +GK H +
Sbjct: 1254 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLNQSSLYWTDVVEDKIYRGKLHENGALTSFE 1313
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1314 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMRSTLLAGDIEHPRAIALDP 1373
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIY--WPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G R I WPNGLT+D +R+ + D++
Sbjct: 1374 RCGI--LFWTDWDASLPRIEAASMSGEGRRVIHKETGSGGWPNGLTVDYLEKRILWIDAR 1431
Query: 259 LDFI 262
D I
Sbjct: 1432 SDAI 1435
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 160/336 (47%), Gaps = 64/336 (19%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
D C+ + K+C+G+ DC +G+DEG C C + C PT G +C C L
Sbjct: 63 TDLCIPMIKLCNGERDCVDGSDEGAHCRELSKNCTDMSCQHHCVPTLNGPMCYCNSSFQL 122
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFL 118
+ D +C+D +EC G CSQ CTN GSY CSC EGY+L+ D+ +CKA N L
Sbjct: 123 AEDGKSCKDFDECTVYGTCSQTCTNNDGSYRCSCVEGYLLQPDHKSCKAKNEPVERPPIL 182
Query: 119 IISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL---DS------- 168
+I+N +I+ L +I + + ++++ + W+ DS
Sbjct: 183 LIANSQNIMATYLNGGS----VPNITPTSTHQTTAMDFNYVEDTVCWVHVGDSSPQTILK 238
Query: 169 --------------------RLNRIE----------------------VCDENGTNRIVL 186
L+ +E VC++NG + L
Sbjct: 239 CAKIPNLKGFVEERTINISLSLHHVEQMAIDWLTGNFYFVDDIDDRIFVCNKNGVTCVTL 298
Query: 187 AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 246
+ P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ TKI +P+G+TLD
Sbjct: 299 LDLELYNPKGIALDPTMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDTKIVFPHGITLD 356
Query: 247 IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
+ R VY+AD+ LD+I+ E K N TI + +
Sbjct: 357 LVNRLVYWADAYLDYIEVVDYEGK---NRHTIIQGI 389
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 145/321 (45%), Gaps = 66/321 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE---CKHKFGLCSN--TCHPTPLGALCTCPPG 58
+C++ C+ DC +G+DE + C +C + C T CTCP G
Sbjct: 3724 KCISAELQCNFFDDCGDGSDEYKCLTDPKTYGCHTNVSMCGDDAKCVQTNTSVYCTCPSG 3783
Query: 59 EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL 118
D +CQD+NEC + G CSQ+C NTKGSY+C+C + ++ + CKA L
Sbjct: 3784 FQKVPDKNSCQDINECLKFGVCSQLCNNTKGSYMCTCAKNFMKTH--QMCKAEGSEYQVL 3841
Query: 119 IISNRHS------------------------ILVADLEEKG------------------- 135
I++ + I D+ KG
Sbjct: 3842 YIADDNKIRSMYHFNPNSAYEPAFQGDESVRIAAMDVYVKGNKIYWTNWHTGRISCRELP 3901
Query: 136 ---------KDHRAQDIVV-----SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
++ R D V SGL + G+A DW+ G+IYW DS + IEV G
Sbjct: 3902 STAGSSASNRNRRQSDGAVTHLNISGLKMPRGIAIDWVAGNIYWTDSGRDVIEVAQMKGE 3961
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++ I WP
Sbjct: 3962 NRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQDNIQWPT 4019
Query: 242 GLTLDIATRRVYFADSKLDFI 262
GL +D R+Y+AD+KL I
Sbjct: 4020 GLAVDYHNERLYWADAKLSVI 4040
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 180/432 (41%), Gaps = 112/432 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L+ +C+ + +FL+ S I L+ K
Sbjct: 1830 GDCSQLCLPTSETTRSCMCTAGYSLKSGQQSCEGV---GSFLLYSVHEGIRGIPLDPNDK 1886
Query: 137 D-----------------HRA------------------------QDIVVSGLDLVEGLA 155
H A +D+V +G+ VEG+A
Sbjct: 1887 SDALVPVSGTSLAVGIDFHAANDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1946
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1947 VDWIAGNIYWTDQGFDVIEVARLNGSFRHVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2004
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE------- 268
PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+ LE
Sbjct: 2005 YPRIERSRLDGTERVVLVNVSISWPNGISVDYEEGKLYWCDARTDKIERIDLETGDKREV 2064
Query: 269 IKTNVNYS----TIFRK-LYWIDE-GGNG-------------VPLKIG------------ 297
+ +N N ++F +YW D NG VPL+ G
Sbjct: 2065 VLSNNNMDMFSVSVFEDYIYWSDRTHANGSIKRGNKENASEIVPLRTGIGVQLKDIKVFN 2124
Query: 298 KANMDGSNASILVSGQLYEALAL---------DLENGMLYYSTLKCTRWLFWTDWGENPR 348
+A G+N +G E L L +GML ++ C + + + E
Sbjct: 2125 RARQKGTNVCAQNNGGC-EQLCLYRGGGQRTCACAHGMLSEDSVSCRDYDGYLLYSERTI 2183
Query: 349 IERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDF 394
++ I + D + +I+ + +G + R++++D I
Sbjct: 2184 LKSIHLSDENNLNAPIKPFEDSEHMKNVIALAFDYRHGSK---GSNRIFYSDIHFGNIQQ 2240
Query: 395 CNYDGTGRQQVI 406
N DG+GR+ ++
Sbjct: 2241 INDDGSGRRTIV 2252
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 60/244 (24%)
Query: 76 QPGYCSQMCT--NTKGSYICSCNEGYVLEYDNHTCKAINHS------------------- 114
+PG CS +C N+ + C C G+ L D +CK H
Sbjct: 466 KPGGCSDICLLGNSHKTRTCRCRSGFSLGSDGKSCKKPEHELFLVYGKGRPGIIRGMDMG 525
Query: 115 -------------------------AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLD 149
F+ ++ S L+ + G D + I+ G+
Sbjct: 526 AKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTDR--ETILKDGIH 583
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTR 206
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G
Sbjct: 584 NVEGIAVDWMGNNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNGL- 642
Query: 207 WLFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKL 259
++WTDW E+P +IER MDGS+R+ I++K + WPNGL+LDI + +Y+ D+
Sbjct: 643 -MYWTDWEEDPKDSKRGKIERAWMDGSHRNVFITSKTVLWPNGLSLDIPGKVLYWVDAFY 701
Query: 260 DFID 263
D I+
Sbjct: 702 DRIE 705
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 143/358 (39%), Gaps = 75/358 (20%)
Query: 84 CTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDI 143
C T S C+C G+ D ++C+ IN F + S + KG
Sbjct: 3769 CVQTNTSVYCTCPSGFQKVPDKNSCQDINECLKFGVCSQLCN------NTKGS------- 3815
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM-MLDPS 202
+ A +++ H ++C G+ VL + + R M +P+
Sbjct: 3816 ------YMCTCAKNFMKTH-----------QMCKAEGSEYQVLYIADDNKIRSMYHFNPN 3858
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV---------- 252
F D E+ RI + + + KIYW N T I+ R +
Sbjct: 3859 SAYEPAFQGD--ESVRIAAMDV------YVKGNKIYWTNWHTGRISCRELPSTAGSSASN 3910
Query: 253 ---YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL 309
+D + ++ L++ + + +YW D G + + + A M G N L
Sbjct: 3911 RNRRQSDGAVTHLNISGLKMPRGIAIDWVAGNIYWTDSGRDVIEV----AQMKGENRKTL 3966
Query: 310 VSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 367
+SG + E A+ +D G +Y W+DWG +P+IE MDG+ R T++ I
Sbjct: 3967 ISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMDGTLRETLVQDNI 4015
Query: 368 YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID----LMVEFTNDLMGD 421
WP GL +D R+Y+AD+KL I +GT V+ ID L F+ D+ D
Sbjct: 4016 QWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT--DPVVAIDSKKGLTHPFSIDIFED 4071
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 123/288 (42%), Gaps = 46/288 (15%)
Query: 69 QDMNECEQ---PGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
Q N CE G CS +C N +Y C+C L DN TC FL+ + +
Sbjct: 1512 QVPNPCEANGGKGRCSHLCLINFNSTYSCACPHLMKLAKDNITCYEF---KKFLLYARQM 1568
Query: 125 SILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
I D++ ++ V +D V + YD + IYW D R I+ NGT
Sbjct: 1569 EIRGVDIDNPYYNY-INSFTVPDIDNVTVVDYDAMEQRIYWSDVRTQTIKRAFINGTGVE 1627
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIIS--------- 234
+ ++ G+ +D +R LFWT + N + I +DGS ++ +I
Sbjct: 1628 TVVSADLPNAHGLAVDWV--SRNLFWTSYDANKKQINVARLDGSFKNAVIQGLDKPHCLV 1685
Query: 235 -----TKIYWPNGLTLDIA-----TRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYW 284
K+YW +G + IA R + F + K + +++Y KLYW
Sbjct: 1686 VHPLKGKLYWTDGDNISIANMDGSNRSLLFTNQK--------GPVGLSIDYQQ--SKLYW 1735
Query: 285 IDEGGNGVPLKIGKANMDGSNASIL--VSGQLYEALALDLENGMLYYS 330
I GNG I + N+DGS ++ + QL +A AL + + L+++
Sbjct: 1736 I-SSGNGT---INRCNLDGSGLEVIENMKNQLRKATALAVMDDKLWWA 1779
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 113/272 (41%), Gaps = 46/272 (16%)
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML------DPSPGTRWLFW 210
D+ G +Y + L I + DEN N + ++ + ++ S G+ +F+
Sbjct: 2171 DYDGYLLYSERTILKSIHLSDENNLNAPIKPFEDSEHMKNVIALAFDYRHGSKGSNRIFY 2230
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
+D I++I DGS R TI+ + GL +Y+
Sbjct: 2231 SDI-HFGNIQQINDDGSGRRTIVEN-VGSVEGLAYHRGWDALYW---------------- 2272
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
T+ STI R + +++ G + M G + A LD
Sbjct: 2273 TSYTTSTITR--HTVNQTRKGAFDRETVITMSGDDHP--------RAFVLD--------- 2313
Query: 331 TLKCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
+C +FWT+W E +P I R + G N TII I PNGL +D ++YF+D+ L
Sbjct: 2314 --ECQNLMFWTNWNEQHPSIMRATLSGFNMITIIDKDIRTPNGLAIDHKAEKIYFSDATL 2371
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
D I+ C YDGT R V+ + + F + GD
Sbjct: 2372 DKIERCEYDGTKRHMVLQAEPVHPFGLAVYGD 2403
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I N T +
Sbjct: 2233 IHFGNIQQINDDGSGRRTIVENVGSVEGLAYHRGWDALYWTSYTTSTITRHTVNQTRKGA 2292
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G N TII I
Sbjct: 2293 FDRETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRATLSGFNMITIIDKDIR 2350
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2351 TPNGLAIDHKAEKIYFSDATLDKIE 2375
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 29/216 (13%)
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
+ +IYW + T I +R + + ++ + L + + R L+W N
Sbjct: 1602 MEQRIYWSDVRTQTI--KRAFINGTGVETVVSADLPNAHGLAVDWVSRNLFWTSYDANKK 1659
Query: 293 PLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+ + A +DGS + ++ G LD + ++ + LK L+WTD G+N I
Sbjct: 1660 QINV--ARLDGSFKNAVIQG-------LDKPHCLVVHP-LKGK--LYWTD-GDN--ISIA 1704
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
MDGSNRS ++ T P GL++D ++Y+ S I+ CN DG+G ++++
Sbjct: 1705 NMDGSNRS-LLFTNQKGPVGLSIDYQQSKLYWISSGNGTINRCNLDGSG------LEVIE 1757
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKT 448
N L A AL + + L+++ + +E + T
Sbjct: 1758 NMKNQLR-----KATALAVMDDKLWWADQASEKMGT 1788
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K ++DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3013 KLSLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMNING 3062
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R +L++
Sbjct: 3063 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYR--TVLVN------- 3113
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
G AL +D++NG LY++ G L
Sbjct: 3114 --SGLREPRALVVDVQNGYLYWTDWGDHSL 3141
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ + GLA D IY+ D+ L++IE C+ +GT R ++ + P G+ +
Sbjct: 2344 IIDKDIRTPNGLAIDHKAEKIYFSDATLDKIERCEYDGTKRHMVLQAEPVHPFGLAV--- 2400
Query: 203 PGTRWLFWTDW 213
++FWTDW
Sbjct: 2401 -YGDYIFWTDW 2410
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 28/150 (18%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S+L +WTD E+ +I R +
Sbjct: 1255 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LNQSSL------YWTDVVED-KIYRGKL 1303
Query: 355 DGSNRST----IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ T +I + P GL +D +Y+ +S LD I+ DGT R +
Sbjct: 1304 HENGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMRSTL----- 1358
Query: 411 MVEFTNDLMGDNGVP-ALALDLENGMLYYS 439
L GD P A+ALD G+L+++
Sbjct: 1359 -------LAGDIEHPRAIALDPRCGILFWT 1381
>gi|426368168|ref|XP_004051083.1| PREDICTED: low-density lipoprotein receptor-related protein 4
[Gorilla gorilla gorilla]
Length = 1956
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 191/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 374 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHT 433
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 434 GYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYELRPDRRSCKALG-PEPV 492
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 493 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 552
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 553 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 612
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 613 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 670
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 671 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 696
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 697 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 740
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1363 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1422
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1423 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1472
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1473 VIGQGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1532
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1533 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1588
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1589 --------------------------------RIESADLNGKLRQVLVS-HVSHPFALTQ 1615
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1616 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1646
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 48/227 (21%)
Query: 137 DHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D Q++VV + L+ GLA DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR
Sbjct: 854 DGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPR 913
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
++++P G +++WTDWG +P+IER GMD S R IIS+ + WPNGL +D ++R+Y+A
Sbjct: 914 DIVVEPMGG--YMYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWA 971
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ + K++E A +DGS +L+ QL
Sbjct: 972 DAGM-----KTIEF-----------------------------AGLDGSKRKVLIGSQLP 997
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
L L +Y WTDW + G +R T+
Sbjct: 998 HPFGLTLYGERIY-----------WTDWQTKSIQSADRLTGLDRETL 1033
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 128/248 (51%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L +D TC PG S + +
Sbjct: 1057 CAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCS-------PGMNSFLIFARRID 1109
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S H I A+L+ G H
Sbjct: 1110 IRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHRISRANLD--GLQH- 1166
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
DIV +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1167 -ADIVTTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1225
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D A+ ++ +AD+
Sbjct: 1226 YHEMG--FMYWTDWGENAKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHT 1283
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1284 ERIEAADL 1291
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 138/344 (40%), Gaps = 94/344 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G C+ +C + +Y C+C G+ + +H C FL+ + R I + +
Sbjct: 758 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTED-- 812
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
D V+ D+ +A DW DSR + +
Sbjct: 813 --LSDDVIPLADVRSAVALDW--------DSRDDHV------------------------ 838
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+WTD + I R DG+ + ++ T + P GL +D T
Sbjct: 839 -----------YWTDVSTD-TISRAKWDGTGQEVVVDTSLESPAGLAIDWVTN------- 879
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KLYW D G + +I AN DGS ++L+ L
Sbjct: 880 -----------------------KLYWTDAGTD----RIEVANTDGSMRTVLIWENLDRP 912
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
+ +E Y ++WTDWG +P+IER GMD S R IIS+ + WPNGL +D
Sbjct: 913 RDIVVEPMGGY---------MYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDY 963
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++R+Y+AD+ + I+F DG+ R+ +I L F L G+
Sbjct: 964 GSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQLPHPFGLTLYGE 1007
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1396 GKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1451
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1452 YTDVFLDVIRRADLNGSNMETVIGQGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1507
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1508 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1558
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1559 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1604
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D + RI R +DG + I++T + +GL
Sbjct: 1123 VVVPINITMKNTIAIGVDPQEGKVYWSDSTLH-RISRANLDGLQHADIVTTGLQTTDGLA 1181
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1182 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1207
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+
Sbjct: 1208 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRAVLIN 1258
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1259 NNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1300
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 139/334 (41%), Gaps = 52/334 (15%)
Query: 131 LEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + +++S L GLA D+ +YW D+ + IE +G+ R VL
Sbjct: 935 IERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGS 994
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
+ P G+ L G R ++WTDW + G +R T+ N + + +
Sbjct: 995 QLPHPFGLTL---YGER-IYWTDWQTKSIQSADRLTGLDRETLQEN---LENLMDIHVFH 1047
Query: 250 RRVYFADS--KLDFIDCKSLEIKT--NVNYS-TIFRKLYWIDEGGNGVP----------- 293
RR + ++ C L +++ +S T + + +G P
Sbjct: 1048 RRRPPVSTPCAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCSPGMNSFLIFARR 1107
Query: 294 LKIGKANMD---GSNASILVSGQLYEALAL--DLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ I ++D ++ + ++ + +A+ D + G +Y+S R
Sbjct: 1108 IDIRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHR------------ 1155
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I R +DG + I++T + +GL +D R+VY+ D+ + I+ N DG+ R+ ++
Sbjct: 1156 ISRANLDGLQHADIVTTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQ 1215
Query: 409 DLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+L + A+ L E G +Y++ G
Sbjct: 1216 NL-----------DSPRAIVLYHEMGFMYWTDWG 1238
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 116/298 (38%), Gaps = 41/298 (13%)
Query: 129 ADLEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
A LE G D + ++++ L GL D + W D+ RIE D NG NR L
Sbjct: 1241 AKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1300
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P G+ L S +++WTDW + I R D S +I + P + +
Sbjct: 1301 SP-VQHPYGLTLLDS----YIYWTDW-QTRSIHR--ADKGTGSNVILVRSNLPGLMDIQA 1352
Query: 248 ATRRVYFADSKLDFID--CKSLEIKTNVNYSTIFRKLYWIDEGGN--------------- 290
R +K + C L + +S + G
Sbjct: 1353 GDRAQPLGFNKCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSR 1412
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENPR 348
G +I D ++ + V +L ++LD + +G +YY+ +
Sbjct: 1413 GSIRRISLDTSDHTDVHVPVP-ELNNVISLDYDSVDGKVYYTDVFLD------------V 1459
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I R ++GSN T+I + +GL +D R +Y+ D+ + I+ DG+ R+ +I
Sbjct: 1460 IRRADLNGSNMETVIGQGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLI 1517
>gi|187952419|gb|AAI36669.1| Low density lipoprotein receptor-related protein 4 [Homo sapiens]
gi|187953301|gb|AAI36668.1| Low density lipoprotein receptor-related protein 4 [Homo sapiens]
Length = 1905
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 191/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 323 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHT 382
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 383 GYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYELRPDRRSCKALG-PEPV 441
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 442 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 501
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 502 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 561
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 562 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 619
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 620 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 645
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 646 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 689
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1312 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1371
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1372 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1421
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1422 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1481
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1482 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1537
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LV G + AL
Sbjct: 1538 --------------------------------RIESADLNGKLRQVLV-GHVSHPFALTQ 1564
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1565 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1595
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 129/248 (52%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L +D TC PG S + +
Sbjct: 1006 CAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCS-------PGMNSFLIFARRID 1058
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S H I A+L+ G H
Sbjct: 1059 IRMVSLDIPYFADVVVPINITMKNTIAVGVDPQEGKVYWSDSTLHRISRANLD--GSQH- 1115
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1116 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1174
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D A+ ++ +AD+
Sbjct: 1175 YHEMG--FMYWTDWGENAKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHT 1232
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1233 ERIEAADL 1240
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 48/227 (21%)
Query: 137 DHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D Q++VV + L+ GLA DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR
Sbjct: 803 DGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPR 862
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
++++P G +++WTDWG +P+IER GMD S R IIS+ + WPNGL +D ++R+Y+A
Sbjct: 863 DIVVEPMGG--YMYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWA 920
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ + K++E A +DGS +L+ QL
Sbjct: 921 DAGM-----KTIEF-----------------------------AGLDGSKRKVLIGSQLP 946
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
L L +Y WTDW + G +R T+
Sbjct: 947 HPFGLTLYGERIY-----------WTDWQTKSIQSADRLTGLDRETL 982
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 138/344 (40%), Gaps = 94/344 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G C+ +C + +Y C+C G+ + +H C FL+ + R I + +
Sbjct: 707 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTED-- 761
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
D V+ D+ +A DW DSR + +
Sbjct: 762 --LSDDVIPLADVRSAVALDW--------DSRDDHV------------------------ 787
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+WTD + I R DG+ + ++ T + P GL +D T
Sbjct: 788 -----------YWTDVSTDT-ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTN------- 828
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KLYW D G + +I AN DGS ++L+ L
Sbjct: 829 -----------------------KLYWTDAGTD----RIEVANTDGSMRTVLIWENLDRP 861
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
+ +E Y ++WTDWG +P+IER GMD S R IIS+ + WPNGL +D
Sbjct: 862 RDIVVEPMGGY---------MYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDY 912
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++R+Y+AD+ + I+F DG+ R+ +I L F L G+
Sbjct: 913 GSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQLPHPFGLTLYGE 956
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1345 GKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1400
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1401 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1456
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1457 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1507
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1508 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1553
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 106/222 (47%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D RI R +DGS II+T + +GL
Sbjct: 1072 VVVPINITMKNTIAVGVDPQEGKVYWSD-STLHRISRANLDGSQHEDIITTGLQTTDGLA 1130
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1131 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1156
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+
Sbjct: 1157 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRAVLIN 1207
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1208 NNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1249
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 139/334 (41%), Gaps = 52/334 (15%)
Query: 131 LEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + +++S L GLA D+ +YW D+ + IE +G+ R VL
Sbjct: 884 IERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGS 943
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
+ P G+ L G R ++WTDW + G +R T+ N + + +
Sbjct: 944 QLPHPFGLTL---YGER-IYWTDWQTKSIQSADRLTGLDRETLQEN---LENLMDIHVFH 996
Query: 250 RRVYFADS--KLDFIDCKSLEIKT--NVNYS-TIFRKLYWIDEGGNGVP----------- 293
RR + ++ C L +++ +S T + + +G P
Sbjct: 997 RRRPPVSTPCAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCSPGMNSFLIFARR 1056
Query: 294 LKIGKANMD---GSNASILVSGQLYEALAL--DLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ I ++D ++ + ++ + +A+ D + G +Y+S R
Sbjct: 1057 IDIRMVSLDIPYFADVVVPINITMKNTIAVGVDPQEGKVYWSDSTLHR------------ 1104
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I R +DGS II+T + +GL +D R+VY+ D+ + I+ N DG+ R+ ++
Sbjct: 1105 ISRANLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQ 1164
Query: 409 DLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+L + A+ L E G +Y++ G
Sbjct: 1165 NL-----------DSPRAIVLYHEMGFMYWTDWG 1187
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 116/298 (38%), Gaps = 41/298 (13%)
Query: 129 ADLEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
A LE G D + ++++ L GL D + W D+ RIE D NG NR L
Sbjct: 1190 AKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1249
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P G+ L S +++WTDW + I R D S +I + P + +
Sbjct: 1250 SP-VQHPYGLTLLDS----YIYWTDW-QTRSIHR--ADKGTGSNVILVRSNLPGLMDMQA 1301
Query: 248 ATRRVYFADSKLDFID--CKSLEIKTNVNYSTIFRKLYWIDEGGN--------------- 290
R +K + C L + +S + G
Sbjct: 1302 VDRAQPLGFNKCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSR 1361
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENPR 348
G +I D ++ + V +L ++LD + +G +YY+ +
Sbjct: 1362 GSIRRISLDTSDHTDVHVPVP-ELNNVISLDYDSVDGKVYYTDVFLD------------V 1408
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I R ++GSN T+I + +GL +D R +Y+ D+ + I+ DG+ R+ +I
Sbjct: 1409 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLI 1466
>gi|57157163|dbj|BAD83615.1| low density lipoprotein receptor-related protein 10 [Homo sapiens]
Length = 1905
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 191/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 323 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHT 382
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 383 GYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYELRPDRRSCKALG-PEPV 441
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 442 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 501
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 502 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 561
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 562 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 619
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 620 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 645
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 646 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 689
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1312 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1371
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1372 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1421
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1422 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1481
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1482 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1537
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LV G + AL
Sbjct: 1538 --------------------------------RIESADLNGKLRQVLV-GHVSHPFALTQ 1564
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1565 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1595
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 129/248 (52%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L +D TC PG S + +
Sbjct: 1006 CAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCS-------PGMNSFLIFARRID 1058
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S H I A+L+ G H
Sbjct: 1059 IRMVSLDIPYFADVVVPINITMKNTIAVGVDPQEGKVYWSDSTLHRISRANLD--GSQH- 1115
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1116 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1174
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D A+ ++ +AD+
Sbjct: 1175 YHEMG--FMYWTDWGENAKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHT 1232
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1233 ERIEAADL 1240
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 48/227 (21%)
Query: 137 DHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D Q++VV + L+ GLA DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR
Sbjct: 803 DGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPR 862
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
++++P G +++WTDWG +P+IER GMD S R IIS+ + WPNGL +D ++R+Y+A
Sbjct: 863 DIVVEPMGG--YMYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWA 920
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ + K++E A +DGS +L+ QL
Sbjct: 921 DAGM-----KTIEF-----------------------------AGLDGSKRKVLIGSQLP 946
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
L L +Y WTDW + G +R T+
Sbjct: 947 HPFGLTLYGERIY-----------WTDWQTKSIQSADRLTGLDRETL 982
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 138/344 (40%), Gaps = 94/344 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G C+ +C + +Y C+C G+ + +H C FL+ + R I + +
Sbjct: 707 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTED-- 761
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
D V+ D+ +A DW DSR + +
Sbjct: 762 --LSDDVIPLADVRSAVALDW--------DSRDDHV------------------------ 787
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+WTD + I R DG+ + ++ T + P GL +D T
Sbjct: 788 -----------YWTDVSTDT-ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTN------- 828
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KLYW D G + +I AN DGS ++L+ L
Sbjct: 829 -----------------------KLYWTDAGTD----RIEVANTDGSMRTVLIWENLDRP 861
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
+ +E Y ++WTDWG +P+IER GMD S R IIS+ + WPNGL +D
Sbjct: 862 RDIVVEPMGGY---------MYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDY 912
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++R+Y+AD+ + I+F DG+ R+ +I L F L G+
Sbjct: 913 GSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQLPHPFGLTLYGE 956
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1345 GKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1400
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1401 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1456
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1457 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1507
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1508 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1553
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 106/222 (47%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D RI R +DGS II+T + +GL
Sbjct: 1072 VVVPINITMKNTIAVGVDPQEGKVYWSD-STLHRISRANLDGSQHEDIITTGLQTTDGLA 1130
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1131 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1156
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+
Sbjct: 1157 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRAVLIN 1207
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1208 NNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1249
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 139/334 (41%), Gaps = 52/334 (15%)
Query: 131 LEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + +++S L GLA D+ +YW D+ + IE +G+ R VL
Sbjct: 884 IERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGS 943
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
+ P G+ L G R ++WTDW + G +R T+ N + + +
Sbjct: 944 QLPHPFGLTL---YGER-IYWTDWQTKSIQSADRLTGLDRETLQEN---LENLMDIHVFH 996
Query: 250 RRVYFADS--KLDFIDCKSLEIKT--NVNYS-TIFRKLYWIDEGGNGVP----------- 293
RR + ++ C L +++ +S T + + +G P
Sbjct: 997 RRRPPVSTPCAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCSPGMNSFLIFARR 1056
Query: 294 LKIGKANMD---GSNASILVSGQLYEALAL--DLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ I ++D ++ + ++ + +A+ D + G +Y+S R
Sbjct: 1057 IDIRMVSLDIPYFADVVVPINITMKNTIAVGVDPQEGKVYWSDSTLHR------------ 1104
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I R +DGS II+T + +GL +D R+VY+ D+ + I+ N DG+ R+ ++
Sbjct: 1105 ISRANLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQ 1164
Query: 409 DLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+L + A+ L E G +Y++ G
Sbjct: 1165 NL-----------DSPRAIVLYHEMGFMYWTDWG 1187
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 116/298 (38%), Gaps = 41/298 (13%)
Query: 129 ADLEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
A LE G D + ++++ L GL D + W D+ RIE D NG NR L
Sbjct: 1190 AKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1249
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P G+ L S +++WTDW + I R D S +I + P + +
Sbjct: 1250 SP-VQHPYGLTLLDS----YIYWTDW-QTRSIHR--ADKGTGSNVILVRSNLPGLMDMQA 1301
Query: 248 ATRRVYFADSKLDFID--CKSLEIKTNVNYSTIFRKLYWIDEGGN--------------- 290
R +K + C L + +S + G
Sbjct: 1302 VDRAQPLGFNKCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSR 1361
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENPR 348
G +I D ++ + V +L ++LD + +G +YY+ +
Sbjct: 1362 GSIRRISLDTSDHTDVHVPVP-ELNNVISLDYDSVDGKVYYTDVFLD------------V 1408
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I R ++GSN T+I + +GL +D R +Y+ D+ + I+ DG+ R+ +I
Sbjct: 1409 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLI 1466
>gi|397488443|ref|XP_003815275.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 4 [Pan paniscus]
Length = 1973
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 191/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 391 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHT 450
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 451 GYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYELRPDRRSCKALG-PEPV 509
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 510 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 569
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 570 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 629
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 630 HPMEGT--IYWTDWGNXPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 687
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 688 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 713
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 714 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 757
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1380 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1439
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1440 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1489
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1490 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1549
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1550 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1605
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1606 --------------------------------RIESADLNGKLRQVLVS-HVSHPFALTQ 1632
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1633 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1663
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 129/248 (52%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L +D TC PG S + +
Sbjct: 1074 CAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCS-------PGMNSFLIFARRID 1126
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S H I A+L+ G H
Sbjct: 1127 IRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHRISRANLD--GSQH- 1183
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1184 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1242
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D A+ ++ +AD+
Sbjct: 1243 YHEMG--FMYWTDWGENAKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHT 1300
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1301 ERIEAADL 1308
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 48/227 (21%)
Query: 137 DHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D Q++VV + L+ GLA DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR
Sbjct: 871 DGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPR 930
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
++++P G +++WTDWG +P+IER GMD S R IIS+ + WPNGL +D ++R+Y+A
Sbjct: 931 DIVVEPMGG--YMYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWA 988
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ + K++E A +DGS +L+ QL
Sbjct: 989 DAGM-----KTIEF-----------------------------AGLDGSKRKVLIGSQLP 1014
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
L L +Y WTDW + G +R T+
Sbjct: 1015 HPFGLTLYGERIY-----------WTDWQTKSIQSADRLTGLDRETL 1050
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 138/344 (40%), Gaps = 94/344 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G C+ +C + +Y C+C G+ + +H C FL+ + R I + +
Sbjct: 775 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTED-- 829
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
D V+ D+ +A DW DSR + +
Sbjct: 830 --LSDDVIPLADVRSAVALDW--------DSRDDHV------------------------ 855
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+WTD + I R DG+ + ++ T + P GL +D T
Sbjct: 856 -----------YWTDVSTD-TISRAKWDGTGQEVVVDTSLESPAGLAIDWVTN------- 896
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KLYW D G + +I AN DGS ++L+ L
Sbjct: 897 -----------------------KLYWTDAGTD----RIEVANTDGSMRTVLIWENLDRP 929
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
+ +E Y ++WTDWG +P+IER GMD S R IIS+ + WPNGL +D
Sbjct: 930 RDIVVEPMGGY---------MYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDY 980
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++R+Y+AD+ + I+F DG+ R+ +I L F L G+
Sbjct: 981 GSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQLPHPFGLTLYGE 1024
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1413 GKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1468
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1469 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1524
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1525 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1575
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1576 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1621
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 107/222 (48%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D + RI R +DGS II+T + +GL
Sbjct: 1140 VVVPINITMKNTIAIGVDPQEGKVYWSDSTLH-RISRANLDGSQHEDIITTGLQTTDGLA 1198
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1199 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1224
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+
Sbjct: 1225 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRAVLIN 1275
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1276 NNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1317
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 139/334 (41%), Gaps = 52/334 (15%)
Query: 131 LEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + +++S L GLA D+ +YW D+ + IE +G+ R VL
Sbjct: 952 IERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGS 1011
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
+ P G+ L G R ++WTDW + G +R T+ N + + +
Sbjct: 1012 QLPHPFGLTL---YGER-IYWTDWQTKSIQSADRLTGLDRETLQEN---LENLMDIHVFH 1064
Query: 250 RRVYFADS--KLDFIDCKSLEIKT--NVNYS-TIFRKLYWIDEGGNGVP----------- 293
RR + ++ C L +++ +S T + + +G P
Sbjct: 1065 RRRPPVSTPCAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCSPGMNSFLIFARR 1124
Query: 294 LKIGKANMD---GSNASILVSGQLYEALAL--DLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ I ++D ++ + ++ + +A+ D + G +Y+S R
Sbjct: 1125 IDIRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHR------------ 1172
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I R +DGS II+T + +GL +D R+VY+ D+ + I+ N DG+ R+ ++
Sbjct: 1173 ISRANLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQ 1232
Query: 409 DLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+L + A+ L E G +Y++ G
Sbjct: 1233 NL-----------DSPRAIVLYHEMGFMYWTDWG 1255
>gi|363734400|ref|XP_421114.3| PREDICTED: low-density lipoprotein receptor-related protein 4
[Gallus gallus]
Length = 1944
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/419 (31%), Positives = 187/419 (44%), Gaps = 95/419 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC +G+DE P + C G C+ C CTC
Sbjct: 367 RCIGQRKLCNGANDCGDGSDESPHQNCRPRTGEENCNVNNGGCAQKCQMVRGMVQCTCHT 426
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI------ 111
G L D +CQD+NEC + GYCSQ CTN++G + C C +GY L D +CKA+
Sbjct: 427 GYRLLEDGRSCQDVNECAEEGYCSQGCTNSEGGFQCWCEQGYELRPDKRSCKALGPEPVL 486
Query: 112 -------------NHSAAFLIISNRHSILVADLEEKGK------------------DHRA 140
+ S L+++N + + D +
Sbjct: 487 LFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHSKELVFWSDVTLDRIMRANLNGSNV 546
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+++V +GL+ GLA DWI +YW DS +RIEV + +GT+R VL N+ +PR + L
Sbjct: 547 EEVVSTGLESPGGLAIDWIHDKLYWTDSGTSRIEVANLDGTHRKVLLWQNLEKPRAIALH 606
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P GT ++WTDWG PRIE MDGSNR I T ++WPNGLT+D A R+Y+ D+K
Sbjct: 607 PMEGT--IYWTDWGNTPRIEYSNMDGSNRRIIADTHLFWPNGLTIDYAGHRMYWVDAKHH 664
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
I+ +A++DG N ++S L A+
Sbjct: 665 VIE----------------------------------RADLDGRNRKAVISQGLPHPFAI 690
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ LY WTDW G N+ II K+++P +DI T
Sbjct: 691 TVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 733
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 158/343 (46%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E ++ +T
Sbjct: 1356 KCGVRNGGCSHLCLPHPTGFSCACPTGIQLKRDEQTCDSSPETYLLFSSRASIRRISLDT 1415
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K I ++ FL + R + +++E
Sbjct: 1416 SDHTDVHIPVPELNNVISLDYDSVDGK-IYYTDVFLDVIRRSDLNGSNMET--------- 1465
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N +EV +G++R VL +++ +PR + + P
Sbjct: 1466 VIGQGLKTTDGLAVDWVARNLYWTDTGRNTVEVARLDGSSRKVLINNSLDEPRAIAVFPK 1525
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1526 KG--YLFWTDWGHIAKIERANLDGSERKILINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1581
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I +++G +LVS Q+ AL
Sbjct: 1582 --------------------------------RIESCDLNGKLRQVLVS-QVSHPFALTQ 1608
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1609 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1639
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 117/202 (57%), Gaps = 26/202 (12%)
Query: 137 DHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D Q++VV + L+ GLA DW+ +YW D+ +RIEV + +GT R VL +N+ +PR
Sbjct: 847 DGSGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVSNTDGTMRTVLIWENLDRPR 906
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+++DP G +++WTDWG NP+IER GMD SNR IIS+ + WPNGL +D ++R+Y+A
Sbjct: 907 DIVVDPVGG--FMYWTDWGANPKIERAGMDASNRLVIISSNLTWPNGLAIDYESQRLYWA 964
Query: 256 DSKLDFIDCKSLE-------IKTNVNYS---TIF-RKLYWIDEGGNGVPLKIGKANMDGS 304
D+ + I+ SL+ I +N+ + T++ ++YW D +
Sbjct: 965 DAGMKTIEYASLDGSNRKVLIGSNLPHPFGLTLYGERIYWTDWQAKSI------------ 1012
Query: 305 NASILVSGQLYEALALDLENGM 326
++ +GQ E L +LEN M
Sbjct: 1013 QSADRRTGQARETLQDNLENLM 1034
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 137/301 (45%), Gaps = 32/301 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C+ G CS+ C P P G CTCP G L +D TC G S + +
Sbjct: 1050 CEVNNGGCSHLCLLAPLPKGYSCTCPTGINLQSDGKTCS-------TGMTSFLIFARRTD 1102
Query: 91 -YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRA------QDI 143
+ S + Y + + ++ A + + + +D + A +DI
Sbjct: 1103 IRMVSLDIPYFADVVVSVNVTMKNTIAIGVDPHEGKVYWSDSTLRKISRAALDGSKFEDI 1162
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ +GL +GLA D IG IYW D+ NRIEV + +G+ R VL N+ PR + L
Sbjct: 1163 ITTGLLTTDGLAVDAIGRKIYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIALYHEM 1222
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +++WTDWGEN ++ER GMDGS R +IS + WPNGL +D A ++ +AD+ + I+
Sbjct: 1223 G--YMYWTDWGENAKLERSGMDGSGRVVLISNNLGWPNGLAVDKAGSQLLWADAHTERIE 1280
Query: 264 CKSLE----------IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
L ++ + + +YW D I +A+ D ILV
Sbjct: 1281 AADLNGANRRTLLSPVQHPYGLTLLDSYIYWTD----WQTRSIHRADKDSGANVILVRAN 1336
Query: 314 L 314
L
Sbjct: 1337 L 1337
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 153/361 (42%), Gaps = 88/361 (24%)
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
A++ + + L+ ++ H+ + + G + R ++S + GL + +IYW D +
Sbjct: 1261 AVDKAGSQLLWADAHTERIEAADLNGANRRT---LLSPVQHPYGLTL--LDSYIYWTDWQ 1315
Query: 170 LNRIEVCDENGTNRIVLAKDNITQ------------------------------------ 193
I D++ ++L + N+
Sbjct: 1316 TRSIHRADKDSGANVILVRANLPGLMDIQAVDRARPLGFNKCGVRNGGCSHLCLPHPTGF 1375
Query: 194 ----PRGMML-------DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI---------- 232
P G+ L D SP T LF I RI +D S+ + +
Sbjct: 1376 SCACPTGIQLKRDEQTCDSSPETYLLF----SSRASIRRISLDTSDHTDVHIPVPELNNV 1431
Query: 233 -------ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
+ KIY+ + + LD+ RR S ++ + + L+ + + R LYW
Sbjct: 1432 ISLDYDSVDGKIYYTD-VFLDV-IRRSDLNGSNMETVIGQGLKTTDGLAVDWVARNLYWT 1489
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
D G N V + A +DGS+ +L++ L E A+ + +LFWTDWG
Sbjct: 1490 DTGRNTVEV----ARLDGSSRKVLINNSLDEPRAI---------AVFPKKGYLFWTDWGH 1536
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD I+ C+ +G RQ +
Sbjct: 1537 IAKIERANLDGSERKILINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESCDLNGKLRQVL 1596
Query: 406 I 406
+
Sbjct: 1597 V 1597
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 140/346 (40%), Gaps = 98/346 (28%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G C+ +C + Y C+C G+ + +H C FL+ + R I +
Sbjct: 751 GGCTHLCLPSSKDYTCACPTGF-RKTSSHACA--QSLDKFLLFARRMDIRRISFDTDD-- 805
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
D V+ D+ +A DW +KD+
Sbjct: 806 --LSDDVIPLADVRSAVALDWD---------------------------SKDD------- 829
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+++WTD + I R DGS + ++ T + P GL +D T
Sbjct: 830 ---------YVYWTDVSTDS-ISRAKWDGSGQEVVVDTSLESPAGLAIDWVTN------- 872
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KLYW D G + +I +N DG+ ++L+ L
Sbjct: 873 -----------------------KLYWTDAGTD----RIEVSNTDGTMRTVLIWENLDRP 905
Query: 318 --LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
+ +D G +Y WTDWG NP+IER GMD SNR IIS+ + WPNGL +
Sbjct: 906 RDIVVDPVGGFMY-----------WTDWGANPKIERAGMDASNRLVIISSNLTWPNGLAI 954
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
D ++R+Y+AD+ + I++ + DG+ R+ +I +L F L G+
Sbjct: 955 DYESQRLYWADAGMKTIEYASLDGSNRKVLIGSNLPHPFGLTLYGE 1000
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 133/331 (40%), Gaps = 94/331 (28%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G CS +C Y C+C G L+ D TC +FLI + R
Sbjct: 1055 GGCSHLCLLAPLPKGYSCTCPTGINLQSDGKTCST--GMTSFLIFARR------------ 1100
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
DI + LD+ Y+ D V+ N+T
Sbjct: 1101 -----TDIRMVSLDIP------------YFAD-----------------VVVSVNVTMKN 1126
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ + P ++W+D +I R +DGS II+T + +GL +D
Sbjct: 1127 TIAIGVDPHEGKVYWSD-STLRKISRAALDGSKFEDIITTGLLTTDGLAVD--------- 1176
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
I RK+YW D G N +I N+DGS +LV L
Sbjct: 1177 ---------------------AIGRKIYWTDTGTN----RIEVGNLDGSMRKVLVWQNLD 1211
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
A+ L + M Y ++WTDWGEN ++ER GMDGS R +IS + WPNGL +
Sbjct: 1212 SPRAIALYHEMGY---------MYWTDWGENAKLERSGMDGSGRVVLISNNLGWPNGLAV 1262
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
D A ++ +AD+ + I+ + +G R+ ++
Sbjct: 1263 DKAGSQLLWADAHTERIEAADLNGANRRTLL 1293
>gi|72534477|dbj|BAE19679.1| low-density lipoprotein receptor-related protein 4 [Homo sapiens]
Length = 1950
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 191/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 371 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHT 430
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 431 GYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYELRPDRRSCKALG-PEPV 489
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 490 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 549
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 550 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 609
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 610 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 667
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 668 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 693
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 694 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 737
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 152/343 (44%), Gaps = 72/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1360 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1419
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1420 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1469
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +
Sbjct: 1470 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDD-----IAAF 1524
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
P +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1525 PRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1582
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LV G + AL
Sbjct: 1583 --------------------------------RIESADLNGKLRQVLV-GHVSHPFALTQ 1609
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1610 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1640
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 129/248 (52%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L +D TC PG S + +
Sbjct: 1054 CAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCS-------PGMNSFLIFARRID 1106
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S H I A+L+ G H
Sbjct: 1107 IRMVSLDIPYFADVVVPINITMKNTIAVGVDPQEGKVYWSDSTLHRISRANLD--GSQH- 1163
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1164 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1222
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D A+ ++ +AD+
Sbjct: 1223 YHEMG--FMYWTDWGENAKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHT 1280
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1281 ERIEAADL 1288
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 140/326 (42%), Gaps = 91/326 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----------- 126
G C+ +C + +Y C+C G+ + +H C FL+ + R I
Sbjct: 755 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTEDLS 811
Query: 127 ----------------------------LVADLEEKGK-DHRAQDIVV-SGLDLVEGLAY 156
+ D + K D Q++VV + L+ GLA
Sbjct: 812 DDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAI 871
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR ++++P G +++WTDWG +
Sbjct: 872 DWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGG--YMYWTDWGAS 929
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD S R IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 930 PKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF------- 977
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
A +DGS +L+ QL L L +Y
Sbjct: 978 ----------------------AGLDGSKRKVLIGSQLPHPFGLTLYGERIY-------- 1007
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G +R T+
Sbjct: 1008 ---WTDWQTKSIQSADRLTGLDRETL 1030
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 106/226 (46%), Gaps = 35/226 (15%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1393 GKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1448
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1449 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1504
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L + A + +LFWTDWG +IER +DGS R
Sbjct: 1505 LDGSCRKVLINNSLDDIAAFPRKG------------YLFWTDWGHIAKIERANLDGSERK 1552
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1553 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1598
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 106/222 (47%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D RI R +DGS II+T + +GL
Sbjct: 1120 VVVPINITMKNTIAVGVDPQEGKVYWSD-STLHRISRANLDGSQHEDIITTGLQTTDGLA 1178
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1179 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1204
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+
Sbjct: 1205 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRAVLIN 1255
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1256 NNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1297
>gi|148695617|gb|EDL27564.1| low density lipoprotein receptor-related protein 4, isoform CRA_a
[Mus musculus]
Length = 1911
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 191/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 323 RCIGQRKLCNGINDCGDSSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHT 382
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTNT+G++ C C GY L D +CKA+
Sbjct: 383 GYRLTEDGRTCQDVNECAEEGYCSQGCTNTEGAFQCWCEAGYELRPDRRSCKALG-PEPV 441
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 442 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 501
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL ++ +PR + L
Sbjct: 502 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIAL 561
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 562 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 619
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 620 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 645
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 646 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 689
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 155/345 (44%), Gaps = 67/345 (19%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1312 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDRKTCDPSPETYLLFSSRGSIRRISLDT 1371
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFL--IISNRHSILVADLEEKGKDHRA 140
+ N L+YD+ K + ++ FL I H ADL
Sbjct: 1372 DDHTDVHVPVPGLNNVISLDYDSVHGK-VYYTDVFLDVIRYEWHWNRRADLNGSN----M 1426
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ ++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + +
Sbjct: 1427 ETVIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVF 1486
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1487 PRKG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD 1544
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
+I A+++G +LVS + AL
Sbjct: 1545 ----------------------------------RIESADLNGKLRQVLVS-HVSHPFAL 1569
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
+ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1570 TQD------------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1601
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 142/326 (43%), Gaps = 91/326 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----------- 126
G C+ +C + +Y C+C G+ + ++H C FL+ + R I
Sbjct: 707 GGCTHLCLPSGQNYTCACPTGF-RKINSHACA--QSLDKFLLFARRMDIRRISFDTEDLS 763
Query: 127 ----------------------------LVADLEEKGK-DHRAQDIVV-SGLDLVEGLAY 156
+ D + K D Q++VV + L+ GLA
Sbjct: 764 DDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAI 823
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR ++++P G +++WTDWG +
Sbjct: 824 DWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGG--YMYWTDWGAS 881
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD S+R IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 882 PKIERAGMDASSRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF------- 929
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
A +DGS +L+ QL L L +Y
Sbjct: 930 ----------------------AGLDGSKRKVLIGSQLPHPFGLTLYGQRIY-------- 959
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G +R T+
Sbjct: 960 ---WTDWQTKSIQSADRLTGLDRETL 982
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 128/248 (51%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L D TC PG S + +
Sbjct: 1006 CAVENGGCSHLCLRSPNPSGFSCTCPTGINLLRDGKTCS-------PGMNSFLIFARRID 1058
Query: 90 SYICSCNEGY---VLEYDNHTCK---AIN----HSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K AI + S H I A L+ G H
Sbjct: 1059 VRMVSLDIPYFADVVVPINMTMKNTIAIGVDPLEGKVYWSDSTLHRISRASLD--GSQH- 1115
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1116 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1174
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D + ++ +AD+
Sbjct: 1175 YHEMG--FMYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHT 1232
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1233 ERIEVADL 1240
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 136/333 (40%), Gaps = 98/333 (29%)
Query: 78 GYCSQMCTNTK--GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G CS +C + + C+C G L D TC +S FLI + R + + L+
Sbjct: 1011 GGCSHLCLRSPNPSGFSCTCPTGINLLRDGKTCSPGMNS--FLIFARRIDVRMVSLDIP- 1067
Query: 136 KDHRAQDIVVSGLDLVEGLA--YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
+ A +V + + +A D + G +YW DS L+
Sbjct: 1068 --YFADVVVPINMTMKNTIAIGVDPLEGKVYWSDSTLH---------------------- 1103
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
RI R +DGS II+T + +GL +D
Sbjct: 1104 ------------------------RISRASLDGSQHEDIITTGLQTTDGLAVD------- 1132
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
I RK+YW D G N +I N+DGS +LV
Sbjct: 1133 -----------------------AIGRKVYWTDTGTN----RIEVGNLDGSMRKVLVWQN 1165
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGL
Sbjct: 1166 LDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGL 1216
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
T+D + ++ +AD+ + I+ + +G R ++
Sbjct: 1217 TVDKTSSQLLWADAHTERIEVADLNGANRHTLV 1249
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 151/367 (41%), Gaps = 95/367 (25%)
Query: 111 INHSAAFLIISNRHS--ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS 168
++ +++ L+ ++ H+ I VADL + +VS + GL + +IYW D
Sbjct: 1218 VDKTSSQLLWADAHTERIEVADLNGANRH-----TLVSPVQHPYGLTL--LDSYIYWTDW 1270
Query: 169 RLNRIEVCDENGTNRIVLAKDNI-----------TQPRGM-------------------- 197
+ I D++ + ++L + N+ QP G
Sbjct: 1271 QTRSIHRADKSTGSNVILVRSNLPGLMDIQAVDRAQPLGFNKCGSRNGGCSHLCLPRPSG 1330
Query: 198 ----------------MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
DPSP T LF I RI +D + + + N
Sbjct: 1331 FSCACPTGIQLKGDRKTCDPSPETYLLF----SSRGSIRRISLDTDDHTDVHVPVPGLNN 1386
Query: 242 GLTLDIAT--RRVYFADSKLDFI----------DCKSLEIKTNVNYST----------IF 279
++LD + +VY+ D LD I D ++T + + +
Sbjct: 1387 VISLDYDSVHGKVYYTDVFLDVIRYEWHWNRRADLNGSNMETVIGHGLKTTDGLAVDWVA 1446
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLF 339
R LYW D G N I + +DGS +L++ L E A+ + +LF
Sbjct: 1447 RNLYWTDTGRN----TIEASRLDGSCRKVLINNSLDEPRAI---------AVFPRKGYLF 1493
Query: 340 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
WTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G
Sbjct: 1494 WTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNG 1553
Query: 400 TGRQQVI 406
RQ ++
Sbjct: 1554 KLRQVLV 1560
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 125/306 (40%), Gaps = 50/306 (16%)
Query: 129 ADLEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
A LE G D + ++++ L GL D + W D+ RIEV D NG NR L
Sbjct: 1190 AKLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHTERIEVADLNGANRHTLV 1249
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P G+ L S +++WTDW + I R D S S +I + P + +
Sbjct: 1250 SP-VQHPYGLTLLDS----YIYWTDW-QTRSIHR--ADKSTGSNVILVRSNLPGLMDIQA 1301
Query: 248 ATRRVYFADSKLDFIDCKS-----------------------LEIKTNVNYSTIFRKLYW 284
R L F C S +++K + + Y
Sbjct: 1302 VDRA-----QPLGFNKCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDRKTCDPSPETYL 1356
Query: 285 IDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYST--LKCTRWLFW 340
+ G +I D ++ + V G L ++LD + +G +YY+ L R+
Sbjct: 1357 L-FSSRGSIRRISLDTDDHTDVHVPVPG-LNNVISLDYDSVHGKVYYTDVFLDVIRY--- 1411
Query: 341 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
+W N R + ++GSN T+I + +GL +D R +Y+ D+ + I+ DG+
Sbjct: 1412 -EWHWNRRAD---LNGSNMETVIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGS 1467
Query: 401 GRQQVI 406
R+ +I
Sbjct: 1468 CRKVLI 1473
>gi|224994223|ref|NP_766256.3| low-density lipoprotein receptor-related protein 4 isoform 1
precursor [Mus musculus]
gi|239938881|sp|Q8VI56.3|LRP4_MOUSE RecName: Full=Low-density lipoprotein receptor-related protein 4;
Short=LRP-4; AltName: Full=LDLR dan; Flags: Precursor
gi|124297915|gb|AAI32241.1| Low density lipoprotein receptor-related protein 4 [Mus musculus]
Length = 1905
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 191/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 323 RCIGQRKLCNGINDCGDSSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHT 382
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTNT+G++ C C GY L D +CKA+
Sbjct: 383 GYRLTEDGRTCQDVNECAEEGYCSQGCTNTEGAFQCWCEAGYELRPDRRSCKALG-PEPV 441
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 442 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 501
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL ++ +PR + L
Sbjct: 502 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIAL 561
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 562 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 619
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 620 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 645
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 646 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 689
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1312 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDRKTCDPSPETYLLFSSRGSIRRISLDT 1371
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1372 DDHTDVHVPVPGLNNVISLDYDSVHGK-VYYTDVFLDVIRRADLNGSNMET--------- 1421
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1422 VIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1481
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1482 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1537
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1538 --------------------------------RIESADLNGKLRQVLVS-HVSHPFALTQ 1564
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1565 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1595
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 142/326 (43%), Gaps = 91/326 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----------- 126
G C+ +C + +Y C+C G+ + ++H C FL+ + R I
Sbjct: 707 GGCTHLCLPSGQNYTCACPTGF-RKINSHACA--QSLDKFLLFARRMDIRRISFDTEDLS 763
Query: 127 ----------------------------LVADLEEKGK-DHRAQDIVV-SGLDLVEGLAY 156
+ D + K D Q++VV + L+ GLA
Sbjct: 764 DDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAI 823
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR ++++P G +++WTDWG +
Sbjct: 824 DWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGG--YMYWTDWGAS 881
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD S+R IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 882 PKIERAGMDASSRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF------- 929
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
A +DGS +L+ QL L L +Y
Sbjct: 930 ----------------------AGLDGSKRKVLIGSQLPHPFGLTLYGQRIY-------- 959
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G +R T+
Sbjct: 960 ---WTDWQTKSIQSADRLTGLDRETL 982
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 128/248 (51%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L D TC PG S + +
Sbjct: 1006 CAVENGGCSHLCLRSPNPSGFSCTCPTGINLLRDGKTCS-------PGMNSFLIFARRID 1058
Query: 90 SYICSCNEGY---VLEYDNHTCK---AIN----HSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K AI + S H I A L+ G H
Sbjct: 1059 VRMVSLDIPYFADVVVPINMTMKNTIAIGVDPLEGKVYWSDSTLHRISRASLD--GSQH- 1115
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1116 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1174
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D + ++ +AD+
Sbjct: 1175 YHEMG--FMYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHT 1232
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1233 ERIEVADL 1240
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 151/360 (41%), Gaps = 88/360 (24%)
Query: 111 INHSAAFLIISNRHS--ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS 168
++ +++ L+ ++ H+ I VADL + +VS + GL + +IYW D
Sbjct: 1218 VDKTSSQLLWADAHTERIEVADLNGANRH-----TLVSPVQHPYGLTL--LDSYIYWTDW 1270
Query: 169 RLNRIEVCDENGTNRIVLAKDNI-----------TQPRGM-------------------- 197
+ I D++ + ++L + N+ QP G
Sbjct: 1271 QTRSIHRADKSTGSNVILVRSNLPGLMDIQAVDRAQPLGFNKCGSRNGGCSHLCLPRPSG 1330
Query: 198 ----------------MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
DPSP T LF I RI +D + + + N
Sbjct: 1331 FSCACPTGIQLKGDRKTCDPSPETYLLF----SSRGSIRRISLDTDDHTDVHVPVPGLNN 1386
Query: 242 GLTLDIAT--RRVYFADSKLDFI---DCKSLEIKTNVNYST----------IFRKLYWID 286
++LD + +VY+ D LD I D ++T + + + R LYW D
Sbjct: 1387 VISLDYDSVHGKVYYTDVFLDVIRRADLNGSNMETVIGHGLKTTDGLAVDWVARNLYWTD 1446
Query: 287 EGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
G N I + +DGS +L++ L E A+ + +LFWTDWG
Sbjct: 1447 TGRN----TIEASRLDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHI 1493
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1494 AKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1553
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 136/333 (40%), Gaps = 98/333 (29%)
Query: 78 GYCSQMCTNTK--GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G CS +C + + C+C G L D TC +S FLI + R + + L+
Sbjct: 1011 GGCSHLCLRSPNPSGFSCTCPTGINLLRDGKTCSPGMNS--FLIFARRIDVRMVSLDIP- 1067
Query: 136 KDHRAQDIVVSGLDLVEGLA--YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
+ A +V + + +A D + G +YW DS L+
Sbjct: 1068 --YFADVVVPINMTMKNTIAIGVDPLEGKVYWSDSTLH---------------------- 1103
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
RI R +DGS II+T + +GL +D
Sbjct: 1104 ------------------------RISRASLDGSQHEDIITTGLQTTDGLAVD------- 1132
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
I RK+YW D G N +I N+DGS +LV
Sbjct: 1133 -----------------------AIGRKVYWTDTGTN----RIEVGNLDGSMRKVLVWQN 1165
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGL
Sbjct: 1166 LDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGL 1216
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
T+D + ++ +AD+ + I+ + +G R ++
Sbjct: 1217 TVDKTSSQLLWADAHTERIEVADLNGANRHTLV 1249
>gi|326920445|ref|XP_003206483.1| PREDICTED: low-density lipoprotein receptor-related protein 4-like
[Meleagris gallopavo]
Length = 1926
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/419 (31%), Positives = 187/419 (44%), Gaps = 95/419 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC +G+DE P + C G C+ C CTC
Sbjct: 368 RCIGQRKLCNGANDCGDGSDESPHQNCRPRTGEENCNINNGGCAQKCQMVRGMVQCTCHT 427
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI------ 111
G L D +CQD+NEC + GYCSQ CTN++G + C C +GY L D +CKA+
Sbjct: 428 GYRLLEDGRSCQDVNECAEEGYCSQGCTNSEGGFQCWCEQGYELRPDKRSCKALGPEPVL 487
Query: 112 -------------NHSAAFLIISNRHSILVADLEEKGK------------------DHRA 140
+ S L+++N + + D +
Sbjct: 488 LFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHSKELVFWSDVTLDRIMRANLNGSNV 547
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+++V +GL+ GLA DWI +YW DS +RIEV + +GT+R VL N+ +PR + L
Sbjct: 548 EEVVSTGLESPGGLAIDWIHDKLYWTDSGTSRIEVANLDGTHRKVLLWQNLEKPRAIALH 607
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P GT ++WTDWG PRIE MDGSNR I T ++WPNGLT+D A R+Y+ D+K
Sbjct: 608 PMEGT--IYWTDWGNTPRIEYSNMDGSNRRIIADTHLFWPNGLTIDYAGHRMYWVDAKHH 665
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
I+ +A++DG N ++S L A+
Sbjct: 666 VIE----------------------------------RADLDGRNRKAVISQGLPHPFAI 691
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ LY WTDW G N+ II K+++P +DI T
Sbjct: 692 TVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 734
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 158/343 (46%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E ++ +T
Sbjct: 1338 KCGVRNGGCSHLCLPHPTGFSCACPTGIQLKRDEQTCDSSPETYLLFSSRASIRRISLDT 1397
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K I ++ FL + R + +++E
Sbjct: 1398 SDHTDVHIPVPELNNVISLDYDSVDGK-IYYTDVFLDVIRRSDLNGSNMET--------- 1447
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N +EV +G++R VL +++ +PR + + P
Sbjct: 1448 VIGQGLKTTDGLAVDWVARNLYWTDTGRNTVEVARLDGSSRKVLINNSLDEPRAIAVFPK 1507
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1508 KG--YLFWTDWGHVAKIERANLDGSERKILINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1563
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I +++G +LVS Q+ AL
Sbjct: 1564 --------------------------------RIESCDLNGKLRQVLVS-QVSHPFALTQ 1590
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1591 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1621
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 117/202 (57%), Gaps = 26/202 (12%)
Query: 137 DHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D Q++VV + L+ GLA DW+ +YW D+ +RIEV + +GT R VL +N+ +PR
Sbjct: 829 DGSGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVSNTDGTMRTVLIWENLDRPR 888
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+++DP G +++WTDWG NP+IER GMD SNR IIS+ + WPNGL +D ++R+Y+A
Sbjct: 889 DIVVDPVGG--FMYWTDWGANPKIERAGMDASNRLVIISSNLTWPNGLAIDYESQRLYWA 946
Query: 256 DSKLDFIDCKSLE-------IKTNVNYS---TIF-RKLYWIDEGGNGVPLKIGKANMDGS 304
D+ + I+ SL+ I +N+ + T++ ++YW D +
Sbjct: 947 DAGMKTIEYASLDGSNRKVLIGSNLPHPFGLTLYGERIYWTDWQAKSI------------ 994
Query: 305 NASILVSGQLYEALALDLENGM 326
++ +GQ E L +LEN M
Sbjct: 995 QSADRRTGQARETLQDNLENLM 1016
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 137/301 (45%), Gaps = 32/301 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C+ G CS+ C P P G CTCP G L +D TC G S + +
Sbjct: 1032 CEVNNGGCSHLCLLAPLPKGYSCTCPTGINLQSDGKTCS-------TGMTSFLIFARRTD 1084
Query: 91 -YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRA------QDI 143
+ S + Y + + ++ A + + + +D + A +DI
Sbjct: 1085 IRMVSLDIPYFADVVVSVNVTMKNTIAIGVDPHEGKVYWSDSTLRKISRAALDGSKFEDI 1144
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ +GL +GLA D IG IYW D+ NRIEV + +G+ R VL N+ PR + L
Sbjct: 1145 ITTGLLTTDGLAVDAIGRKIYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIALYHEM 1204
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +++WTDWGEN ++ER GMDGS R +IS + WPNGL +D A ++ +AD+ + I+
Sbjct: 1205 G--YMYWTDWGENAKLERSGMDGSGRVVLISNNLGWPNGLAVDKAGSQLLWADAHTERIE 1262
Query: 264 CKSLE----------IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
L ++ + + +YW D I +A+ D ILV
Sbjct: 1263 AADLNGANRRTLLSPVQHPYGLTLLDSYIYWTDWQTR----SIHRADKDSGANVILVRAN 1318
Query: 314 L 314
L
Sbjct: 1319 L 1319
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 153/361 (42%), Gaps = 88/361 (24%)
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
A++ + + L+ ++ H+ + + G + R ++S + GL + +IYW D +
Sbjct: 1243 AVDKAGSQLLWADAHTERIEAADLNGANRRT---LLSPVQHPYGLTL--LDSYIYWTDWQ 1297
Query: 170 LNRIEVCDENGTNRIVLAKDNITQ------------------------------------ 193
I D++ ++L + N+
Sbjct: 1298 TRSIHRADKDSGANVILVRANLPGLMDIQAVDRARPLGFNKCGVRNGGCSHLCLPHPTGF 1357
Query: 194 ----PRGMML-------DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI---------- 232
P G+ L D SP T LF I RI +D S+ + +
Sbjct: 1358 SCACPTGIQLKRDEQTCDSSPETYLLF----SSRASIRRISLDTSDHTDVHIPVPELNNV 1413
Query: 233 -------ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
+ KIY+ + + LD+ RR S ++ + + L+ + + R LYW
Sbjct: 1414 ISLDYDSVDGKIYYTD-VFLDV-IRRSDLNGSNMETVIGQGLKTTDGLAVDWVARNLYWT 1471
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
D G N V + A +DGS+ +L++ L E A+ + +LFWTDWG
Sbjct: 1472 DTGRNTVEV----ARLDGSSRKVLINNSLDEPRAI---------AVFPKKGYLFWTDWGH 1518
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD I+ C+ +G RQ +
Sbjct: 1519 VAKIERANLDGSERKILINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESCDLNGKLRQVL 1578
Query: 406 I 406
+
Sbjct: 1579 V 1579
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 107/228 (46%), Gaps = 48/228 (21%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ LD +++WTD + I R DGS + ++ T + P GL +D T
Sbjct: 801 AVALDWDSKDDYVYWTDVSTDS-ISRAKWDGSGQEVVVDTSLESPAGLAIDWVTN----- 854
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
KLYW D G + +I +N DG+ ++L+ L
Sbjct: 855 -------------------------KLYWTDAGTD----RIEVSNTDGTMRTVLIWENLD 885
Query: 316 EA--LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
+ +D G +Y WTDWG NP+IER GMD SNR IIS+ + WPNGL
Sbjct: 886 RPRDIVVDPVGGFMY-----------WTDWGANPKIERAGMDASNRLVIISSNLTWPNGL 934
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+D ++R+Y+AD+ + I++ + DG+ R+ +I +L F L G+
Sbjct: 935 AIDYESQRLYWADAGMKTIEYASLDGSNRKVLIGSNLPHPFGLTLYGE 982
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 133/331 (40%), Gaps = 94/331 (28%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G CS +C Y C+C G L+ D TC +FLI + R
Sbjct: 1037 GGCSHLCLLAPLPKGYSCTCPTGINLQSDGKTCST--GMTSFLIFARR------------ 1082
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
DI + LD+ Y+ D V+ N+T
Sbjct: 1083 -----TDIRMVSLDIP------------YFAD-----------------VVVSVNVTMKN 1108
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ + P ++W+D +I R +DGS II+T + +GL +D
Sbjct: 1109 TIAIGVDPHEGKVYWSD-STLRKISRAALDGSKFEDIITTGLLTTDGLAVD--------- 1158
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
I RK+YW D G N +I N+DGS +LV L
Sbjct: 1159 ---------------------AIGRKIYWTDTGTN----RIEVGNLDGSMRKVLVWQNLD 1193
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
A+ L + M Y ++WTDWGEN ++ER GMDGS R +IS + WPNGL +
Sbjct: 1194 SPRAIALYHEMGY---------MYWTDWGENAKLERSGMDGSGRVVLISNNLGWPNGLAV 1244
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
D A ++ +AD+ + I+ + +G R+ ++
Sbjct: 1245 DKAGSQLLWADAHTERIEAADLNGANRRTLL 1275
>gi|449504278|ref|XP_002198795.2| PREDICTED: low-density lipoprotein receptor-related protein 4
[Taeniopygia guttata]
Length = 1801
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 192/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC +G+DE P + C G C+ C CTC
Sbjct: 321 RCIGQRKLCNGANDCGDGSDESPHQNCRPRTGEENCNVNNGGCAQKCQMVRGMVQCTCHT 380
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L D +CQD+NEC + GYCSQ CTN++G + C C +GY L D +CKA+
Sbjct: 381 GYRLLEDGRSCQDVNECAEEGYCSQGCTNSEGGFQCWCEQGYELRPDKRSCKALG-PEPV 439
Query: 118 LIISNR------------HSILVADLEEK-------------------GKDHRA------ 140
L+ +NR +++L+ +LE + RA
Sbjct: 440 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHSKELVFWSDVTLDRIMRANLNGSN 499
Query: 141 -QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DWI +YW DS +RIEV + +GT+R VL N+ +PR + L
Sbjct: 500 VEEVVSTGLESPGGLAIDWIHDKLYWTDSGTSRIEVANLDGTHRKVLLWQNLEKPRAIAL 559
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGSNR I T ++WPNGLT+D A R+Y+ D+K
Sbjct: 560 HPMEGT--IYWTDWGNTPRIEYSNMDGSNRRIIADTHLFWPNGLTIDYAGHRMYWVDAKH 617
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +A++DG N ++S L A
Sbjct: 618 HVIE----------------------------------RADLDGRNRKAVISQGLPHPFA 643
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 644 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 687
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 185/397 (46%), Gaps = 40/397 (10%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E ++ +T
Sbjct: 1237 KCGVRNGGCSHLCLPHPTGFSCACPTGIQLKRDEQTCDSSPETYLLFSSRASIRRISLDT 1296
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K I ++ FL + R + +++E
Sbjct: 1297 SDHTDVHIPVPELNNVISLDYDSVDGK-IYYTDVFLDVIRRADLNGSNMET--------- 1346
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IEV +G++R VL +++ +PR + + P
Sbjct: 1347 VIGQGLKTTDGLAVDWVARNLYWTDTGRNTIEVARLDGSSRKVLINNSLDEPRAIAVFPK 1406
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--SKLD 260
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+ S L+
Sbjct: 1407 KG--YLFWTDWGHIAKIERANLDGSERKILINTDLGWPNGLTLDYDTRRIVDKGFYSGLN 1464
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGG--NGVPLKIGKANMDGSNASILVSGQLYEAL 318
F + + +F D G G L + K + V G+ Y+
Sbjct: 1465 FFINIYVPSSAGQGMNQLFHLFQKYDHPGWSFGDLLFLQKVK-------VSVEGR-YQRT 1516
Query: 319 ALDLENGMLYYSTLKCTRW-----LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
L LE TL T W ++W+D +I R +DGS II+T + +GL
Sbjct: 1517 PLHLEWDHPEGHTLS-TAWDGAGKVYWSD-STLRKISRAALDGSQFEDIITTGLLTTDGL 1574
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+D R++Y+ D+ + I+ N DG+ R+ ++ +L
Sbjct: 1575 AVDAIGRKIYWTDTGTNRIEVGNLDGSMRKVLVWQNL 1611
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 193/436 (44%), Gaps = 99/436 (22%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR-------------- 123
G C+ +C + Y C+C G+ + +H C FL+ + R
Sbjct: 705 GGCTHLCLPSSKDYTCACPTGF-RKTSSHACA--QSLDKFLLFARRMDIRRISFDTDDLS 761
Query: 124 ---------HSILVADLEEKGK-----------------DHRAQDIVV-SGLDLVEGLAY 156
S + D + K D Q++VV + L+ GLA
Sbjct: 762 DDVIPLADVRSAVALDWDSKDDYVYWTDVSTDSISRAKWDGSNQEVVVDTSLESPAGLAI 821
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +GT R VL +N+ +PR +++DP G +++WTDWG N
Sbjct: 822 DWVTNKLYWTDAGTDRIEVSNTDGTMRTVLIWENLDRPRDIVVDPIGG--FMYWTDWGAN 879
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE-------I 269
P+IER GMD SNR IIS+ + WPNGL +D ++R+Y+AD+ + I+ SL+ I
Sbjct: 880 PKIERAGMDASNRLVIISSNLTWPNGLAIDYESQRLYWADAGMKTIEYASLDGNHRKVLI 939
Query: 270 KTNVNYS---TIF-RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
+N+ + T++ ++YW D + ++ SGQ E L +LEN
Sbjct: 940 GSNLPHPFGLTLYGERIYWTDWQAKSI------------QSADRRSGQSRETLQDNLENL 987
Query: 326 M--LYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS-TIISTKIYWPN----------- 371
M + + + + I + +D + ++S + N
Sbjct: 988 MDIHVFHRHRPPGMTSFLIFARRTDIRMVSLDIPYFADVVVSVNVTMKNTIAIGVDPHEG 1047
Query: 372 -----GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPA 426
GL +D R++Y+ D+ + I+ N DG+ R+ ++ +L + A
Sbjct: 1048 LLTTDGLAVDAIGRKIYWTDTGTNRIEVGNLDGSMRKVLVWQNL-----------DSPRA 1096
Query: 427 LALDLENGMLYYSTEG 442
+AL E G +Y++ G
Sbjct: 1097 IALYHEMGYMYWTDWG 1112
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 135/310 (43%), Gaps = 51/310 (16%)
Query: 131 LEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + +++S L GLA D+ +YW D+ + IE +G +R VL
Sbjct: 882 IERAGMDASNRLVIISSNLTWPNGLAIDYESQRLYWADAGMKTIEYASLDGNHRKVLIGS 941
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST----------KIYW 239
N+ P G+ L G R ++WTDW G +R T+ +
Sbjct: 942 NLPHPFGLTL---YGER-IYWTDWQAKSIQSADRRSGQSRETLQDNLENLMDIHVFHRHR 997
Query: 240 PNGLT-LDIATRRVYFADSKLDFIDCKSLEIKTNVNYS---------------------- 276
P G+T I RR LD + + NV
Sbjct: 998 PPGMTSFLIFARRTDIRMVSLDIPYFADVVVSVNVTMKNTIAIGVDPHEGLLTTDGLAVD 1057
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
I RK+YW D G N +I N+DGS +LV L A+ L + M Y
Sbjct: 1058 AIGRKIYWTDTGTN----RIEVGNLDGSMRKVLVWQNLDSPRAIALYHEMGY-------- 1105
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
++WTDWGEN ++ER GMDGS R +IS + WPNGL +D A ++ +AD+ + I+ +
Sbjct: 1106 -MYWTDWGENAKLERSGMDGSGRVVLISNNLGWPNGLAVDKAGSQLLWADAHTERIEAAD 1164
Query: 397 YDGTGRQQVI 406
+G R+ ++
Sbjct: 1165 LNGAHRRTLL 1174
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 92/178 (51%), Gaps = 16/178 (8%)
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTR 206
GL +GLA D IG IYW D+ NRIEV + +G+ R VL N+ PR + L G
Sbjct: 1047 GLLTTDGLAVDAIGRKIYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIALYHEMG-- 1104
Query: 207 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKS 266
+++WTDWGEN ++ER GMDGS R +IS + WPNGL +D A ++ +AD+ + I+
Sbjct: 1105 YMYWTDWGENAKLERSGMDGSGRVVLISNNLGWPNGLAVDKAGSQLLWADAHTERIEAAD 1164
Query: 267 LE----------IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
L ++ + + +YW D I +A+ D ILV L
Sbjct: 1165 LNGAHRRTLLSPVQHPYGLTLLDSYIYWTDWQTR----SIHRADKDTGANVILVRANL 1218
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 123/299 (41%), Gaps = 43/299 (14%)
Query: 129 ADLEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
A LE G D + +++S L GLA D G + W D+ RIE D NG +R L
Sbjct: 1115 AKLERSGMDGSGRVVLISNNLGWPNGLAVDKAGSQLLWADAHTERIEAADLNGAHRRTLL 1174
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD-GSNRSTIISTKIYWPNGLTLD 246
+ P G+ L S +++WTDW + I R D G+N +I + P + +
Sbjct: 1175 SP-VQHPYGLTLLDS----YIYWTDW-QTRSIHRADKDTGAN---VILVRANLPGLMDIQ 1225
Query: 247 IATRRVYFADSKLDFID--CKSLEIKTNVNYS-------TIFRKLYWIDEGGNGVPLKIG 297
R +K + C L + +S + R D L
Sbjct: 1226 AVDRARPLGFNKCGVRNGGCSHLCLPHPTGFSCACPTGIQLKRDEQTCDSSPETYLLFSS 1285
Query: 298 KANM--------DGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP 347
+A++ D ++ I V +L ++LD + +G +YY+ +
Sbjct: 1286 RASIRRISLDTSDHTDVHIPVP-ELNNVISLDYDSVDGKIYYTDVFLD------------ 1332
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I R ++GSN T+I + +GL +D R +Y+ D+ + I+ DG+ R+ +I
Sbjct: 1333 VIRRADLNGSNMETVIGQGLKTTDGLAVDWVARNLYWTDTGRNTIEVARLDGSSRKVLI 1391
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+DI+ +GL +GLA D IG IYW D+ NRIEV + +G+ R VL N+ PR + L
Sbjct: 1561 EDIITTGLLTTDGLAVDAIGRKIYWTDTGTNRIEVGNLDGSMRKVLVWQNLYSPRAIALY 1620
Query: 201 PSPGTR 206
G R
Sbjct: 1621 HEMGLR 1626
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 154 LAYDWIG-GHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
L+ W G G +YW DS L +I +G+ + + G+ +D R ++WTD
Sbjct: 1530 LSTAWDGAGKVYWSDSTLRKISRAALDGSQFEDIITTGLLTTDGLAVDAI--GRKIYWTD 1587
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
G N RIE +DGS R ++ +Y P + L
Sbjct: 1588 TGTN-RIEVGNLDGSMRKVLVWQNLYSPRAIAL 1619
>gi|45382557|ref|NP_990573.1| low-density lipoprotein receptor-related protein 1 precursor [Gallus
gallus]
gi|1708864|sp|P98157.1|LRP1_CHICK RecName: Full=Low-density lipoprotein receptor-related protein 1;
Short=LRP-1; AltName: Full=Alpha-2-macroglobulin
receptor; Short=A2MR; Flags: Precursor
gi|438007|emb|CAA52870.1| alpha-2-macroglobulin receptor [Gallus gallus]
Length = 4543
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 189/405 (46%), Gaps = 92/405 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ +CD DC +G+DE C + EC K CS C +G C C PG L
Sbjct: 2913 KCIPEALLCDNNNDCADGSDE-LNCFINECLNKKLSGCSQECEDLKIGYKCRCRPGFRLK 2971
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GSY C C EGY L+ DN T CKA+ FLI +
Sbjct: 2972 DDGKTCIDIDECSTTYPCSQKCINTLGSYKCLCIEGYKLKPDNPTSCKAVTDEEPFLIFA 3031
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 3032 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHINGSNVQ 3091
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3092 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVNSGLREPRALVVDV 3151
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I +IGMDG+NRS I+ TKI WPNGLTLD R+Y+AD++ D+
Sbjct: 3152 QNG--YLYWTDWGDHSLIGKIGMDGTNRSVIVDTKITWPNGLTLDYINSRIYWADAREDY 3209
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN ++S + AL
Sbjct: 3210 IE----------------------------------FASLDGSNRHTVLSQDIPHIFALT 3235
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIST 365
L +Y WTDW E I R G+N++ +IST
Sbjct: 3236 LFEDYIY-----------WTDW-ETKSINRAHKTTGANKTLLIST 3268
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 116/331 (35%), Positives = 171/331 (51%), Gaps = 60/331 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++++K+C+G DC +G+DEGP C LA C G C + C PT G C C L+
Sbjct: 87 CIHMSKLCNGLHDCFDGSDEGPHCREQLANCT-ALG-CQHHCVPTLSGPACYCNNSFQLA 144
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLI 119
D +C+D +EC G CSQ CTNT+GSY CSC EGY+L+ DN +CKA N L+
Sbjct: 145 EDRRSCKDFDECTVYGTCSQTCTNTEGSYTCSCVEGYLLQPDNRSCKAKNEPVDRPPVLL 204
Query: 120 ISNRHSILVADLE---------EKGKDHRAQDI--------------------------- 143
I+N +IL L K A D
Sbjct: 205 IANSQNILATYLSGAPVPNITPTSAKQTTAMDFNYIEDTVCWVHVGDSASQTILKCAKIP 264
Query: 144 ------------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI 191
+ L VE +A DW+ G+ Y++D +RI VC++NG + L +
Sbjct: 265 NLKGFVEERSINISLSLHQVEQMAIDWLTGNFYFVDDIDDRIFVCNKNGLTCVTLLDLEL 324
Query: 192 TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R
Sbjct: 325 YNPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRL 382
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
VY+AD+ LD+I+ E K N TI + +
Sbjct: 383 VYWADAYLDYIEVVDYEGK---NRHTIIQGI 410
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 149/304 (49%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1157 CLPPEKLCDGSDDCGDGSDEGELCD--QCSLNNGGCSHNCTVAPGEGIVCSCPLGMELGA 1214
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K + CSC EG++LE D +C++++ F+I SNR
Sbjct: 1215 DNKTCQIQSYCAKHLKCSQKCEQDKYNVKCSCYEGWMLEPDGESCRSLDPFKPFIIFSNR 1274
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1275 HEIRRIDLHRGDYSVLVPGLRNTIALDFHLNQSSLYWTDVVEDKIYRGKLLENGALTSFE 1334
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1335 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMRTTLLAGDIEHPRAIALDP 1394
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIY--WPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 1395 RYGI--LFWTDWDASLPRIEAASMSGAGRRTIHKETGSGGWPNGLTVDYLEKRILWIDAR 1452
Query: 259 LDFI 262
D I
Sbjct: 1453 SDAI 1456
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 147/328 (44%), Gaps = 79/328 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHK---FGLCSNT--------CHPTPLGAL 52
+C++ C+ DC +G+DE C H+ + +NT C
Sbjct: 3751 KCISANLRCNFFDDCGDGSDE------KSCSHEHKSYDCMTNTTMCGDEAQCIQAQSSTY 3804
Query: 53 CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN 112
CTC G D +CQD+NEC + G CSQ+C NTKGS++CSC + + ++ DN CKA
Sbjct: 3805 CTCRRGFQKVPDKNSCQDVNECLRFGTCSQLCNNTKGSHVCSCAKNF-MKTDN-MCKAEG 3862
Query: 113 HSAAFLIISNRHSIL------------------------VADLEEKG------------- 135
L I++ + I D+ KG
Sbjct: 3863 SEHQILYIADDNKIRSMYPFNPNSAYEPAFQGDENVRIDAMDIYVKGNKIYWTNWHTGRI 3922
Query: 136 ----------------KDHRAQDIVVSGLDLV-----EGLAYDWIGGHIYWLDSRLNRIE 174
++ R D V+ L++ G+A DW+ G+IYW DS + IE
Sbjct: 3923 SYCELPASSAASTASNRNRRQIDGGVTHLNISGLKMPRGIAVDWVAGNIYWTDSGRDVIE 3982
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V G NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++
Sbjct: 3983 VAQMKGENRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQ 4040
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
I WP GL +D R+Y+AD+KL I
Sbjct: 4041 DNIQWPTGLAVDYHNERLYWADAKLSVI 4068
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 170/431 (39%), Gaps = 110/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + S C C GY L+ +C+ + +FL+ S I L+ K
Sbjct: 1851 GDCSQLCLPTSETSRSCMCTAGYSLKSGQQSCEGV---GSFLLYSVHEGIRGIPLDPNDK 1907
Query: 137 ----------------DHRAQ-------------------------DIVVSGLDLVEGLA 155
D A+ D+V +G+ VEG+A
Sbjct: 1908 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1967
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1968 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2025
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 2026 YPRIERSRLDGTERMVLVNVSISWPNGISVDYEDGKLYWCDARTDKIERIDLETGENREV 2085
Query: 273 ---------VNYSTIFRKLYWID----------------------EGGNGVPLK----IG 297
+ S +YW D G GV LK
Sbjct: 2086 VLSSDNMDMFSVSVFEDYIYWSDRTHANGSIKRGSKDNATESVSLRTGIGVQLKDIKVFN 2145
Query: 298 KANMDGSNASILVSGQLYEALALD--------LENGMLYYSTLKCTRWLFWTDWGENPRI 349
+A G+N +G + +GML + C + + + E +
Sbjct: 2146 RARQKGTNVCAQNNGGCQQLCLFRGGGRRTCACAHGMLSEDGVSCRDYDGYLLYSERTIL 2205
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G + R++++D I
Sbjct: 2206 KSIHLSDENNLNAPIKPFEDAEHMKNVIALAFDYRYGTK---GSNRIFYSDIHFGNIQQI 2262
Query: 396 NYDGTGRQQVI 406
N DGTGR+ ++
Sbjct: 2263 NDDGTGRRTIV 2273
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 152/382 (39%), Gaps = 123/382 (32%)
Query: 76 QPGYCSQMCT--NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ S C C G+ L D +CK H FL+
Sbjct: 487 KPGGCSDICLLGNSHKSRTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 545
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 546 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 605
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 606 VEGIAVDWMGNNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 663
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P +IER MDGSNR+ I++K + WPNGL+LDI + +Y+ D+ D
Sbjct: 664 MYWTDWEEDPKDSKRGKIERAWMDGSNRNVFITSKTVLWPNGLSLDIPAKILYWVDAFYD 723
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
I+ L NG KI +YE L
Sbjct: 724 RIEMVYL----------------------NGTERKI-----------------VYEGPEL 744
Query: 321 DLENGMLYYSTLKCTRWLFWTDW-------------------GENPRIERIGMDGSNRST 361
+ G+ +YS+ LFWT++ E P I I M + +
Sbjct: 745 NHAFGLCHYSSF-----LFWTEYRSGSIYRLDQSSKAVSLLRNERPPIFEIRMYDAQQQQ 799
Query: 362 IISTKIYWPNG--LTLDIATRR 381
+ S K NG +L +AT R
Sbjct: 800 VGSNKCRVNNGGCSSLCLATPR 821
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 138/361 (38%), Gaps = 78/361 (21%)
Query: 83 MCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
C + S C+C G+ D ++C+ +N F S
Sbjct: 3795 QCIQAQSSTYCTCRRGFQKVPDKNSCQDVNECLRFGTCSQ-------------------- 3834
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE-VCDENGTNRIVLAKDNITQPRGMM-LD 200
L + G H+ + + +C G+ +L + + R M +
Sbjct: 3835 -----------LCNNTKGSHVCSCAKNFMKTDNMCKAEGSEHQILYIADDNKIRSMYPFN 3883
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA------------ 248
P+ F D EN RI+ + + + KIYW N T I+
Sbjct: 3884 PNSAYEPAFQGD--ENVRIDAMDI------YVKGNKIYWTNWHTGRISYCELPASSAAST 3935
Query: 249 --TRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
R D + ++ L++ + + +YW D G + + + A M G N
Sbjct: 3936 ASNRNRRQIDGGVTHLNISGLKMPRGIAVDWVAGNIYWTDSGRDVIEV----AQMKGENR 3991
Query: 307 SILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
L+SG + E A+ +D G +Y W+DWG +P+IE MDG+ R T++
Sbjct: 3992 KTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMDGTLRETLVQ 4040
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID----LMVEFTNDLMG 420
I WP GL +D R+Y+AD+KL I +GT V+ ID L F+ D+
Sbjct: 4041 DNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT--DPVVAIDNKKGLSHPFSIDIFE 4098
Query: 421 D 421
D
Sbjct: 4099 D 4099
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 141/365 (38%), Gaps = 66/365 (18%)
Query: 72 NECEQ---PGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL 127
N CE G CS +C N + C+C L+ DN TC FL+ + + I
Sbjct: 1536 NPCEANGGKGPCSHLCLINYNRTLSCACPHLMKLDKDNTTCYEFK---KFLLYARQMEIR 1592
Query: 128 VADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
D++ ++ V +D V + YD + IYW D R I+ NGT +
Sbjct: 1593 GVDIDNPYYNYIIS-FTVPDIDNVTVVDYDAVEQRIYWSDVRTQTIKRAFINGTGVETVV 1651
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLD 246
++ G+ +D +R LFWT + N + I +DGS ++ +I
Sbjct: 1652 SADLPNAHGLSVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVI------------- 1696
Query: 247 IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
+ L+ + + KLYW D G N I ANMDGSN
Sbjct: 1697 ------------------QGLDKPHCLVVHPLHGKLYWTD-GDN-----ISVANMDGSNR 1732
Query: 307 SILVSGQLYE-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
++L + Q LA+D LY W G N I R +DGS+ I++
Sbjct: 1733 TLLFTNQRGPVGLAIDYPESKLY-----------WISSG-NGTINRCNLDGSDLEVIVAV 1780
Query: 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCN-YDGTG----RQQVILIDLMVEFTNDLMG 420
K L I ++++AD + + CN DGT R L+ LM + +
Sbjct: 1781 KSQLSKATALAIMGDKLWWADQASERMGTCNKKDGTEVTVLRNSTTLVMLMKVYDESIQQ 1840
Query: 421 DNGVP 425
P
Sbjct: 1841 AGSNP 1845
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N II I PNGL +D ++YF+D+ LD
Sbjct: 2335 ECQNLMFWTNWNEQHPSIMRATLSGANVLIIIDQDIRTPNGLAIDHRAEKIYFSDATLDK 2394
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
I+ C YDG+ R ++ + + F + GD
Sbjct: 2395 IERCEYDGSHRHVILKSEPVHPFGLAVYGD 2424
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 65/152 (42%), Gaps = 23/152 (15%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL-------------DSRLNR 172
I ++++ D + +V + VEGLAY +YW SRL
Sbjct: 2254 IHFGNIQQINDDGTGRRTIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQSRLGA 2313
Query: 173 IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRST 231
E V+ PR +LD +FWT+W E +P I R + G+N
Sbjct: 2314 FE-------RETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRATLSGANVLI 2364
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
II I PNGL +D ++YF+D+ LD I+
Sbjct: 2365 IIDQDIRTPNGLAIDHRAEKIYFSDATLDKIE 2396
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3038 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHING 3087
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R +L++
Sbjct: 3088 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYR--TVLVN------- 3138
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
G AL +D++NG LY++ G L
Sbjct: 3139 --SGLREPRALVVDVQNGYLYWTDWGDHSL 3166
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ + GLA D IY+ D+ L++IE C+ +G++R V+ K P G+ +
Sbjct: 2365 IIDQDIRTPNGLAIDHRAEKIYFSDATLDKIERCEYDGSHRHVILKSEPVHPFGLAV--- 2421
Query: 203 PGTRWLFWTDW 213
++FWTDW
Sbjct: 2422 -YGDYIFWTDW 2431
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 71/150 (47%), Gaps = 28/150 (18%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S+L +WTD E+ +I R +
Sbjct: 1276 EIRRIDLHRGDYSVLVPG-LRNTIALDFH---LNQSSL------YWTDVVED-KIYRGKL 1324
Query: 355 --DGSNRS--TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+G+ S +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1325 LENGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMR-------- 1376
Query: 411 MVEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD G+L+++
Sbjct: 1377 ----TTLLAGDIEHPRAIALDPRYGILFWT 1402
>gi|312372200|gb|EFR20215.1| hypothetical protein AND_20492 [Anopheles darlingi]
Length = 4749
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/427 (31%), Positives = 191/427 (44%), Gaps = 92/427 (21%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V ++C+ + ++C+G+TDCP+G DEG C C + CS+TCH P G +C+CPP
Sbjct: 1194 VTNQCITVAQLCNGRTDCPDGTDEGFRCLEKLCDSRDHECSHTCHNAPEGVVCSCPPHLF 1253
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
L + C + CE G CSQ C Y C C EGY L YD +C++ + ++I
Sbjct: 1254 LQPNGRDCSHAHACEAWGTCSQNCLVKARHYRCDCVEGYSLMYDKFSCRSNARDSPYVIF 1313
Query: 121 SNRHSILVADLEEKG---------------------------------KDHRA------- 140
SNR IL DL K +R
Sbjct: 1314 SNRQEILGVDLNTHAVKSFYTSLRNTIALDFLYRNDSIQIFWSDVLDDKIYRGTLRNDTL 1373
Query: 141 ---QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+ +V SGL EGLA DW+G +IYW+DS L++IEV NG+ R L ++ PR +
Sbjct: 1374 SNVEAVVQSGLSTAEGLAVDWVGLNIYWIDSNLDQIEVAKTNGSFRRTLVAGDMVNPRAI 1433
Query: 198 MLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTI--ISTKIYWPNGLTLDIATRRVYF 254
LDP G LFWTDW E +PR+ER M G NR+ I + + WPNG+ LD RVY+
Sbjct: 1434 ALDPLQGV--LFWTDWEEGSPRLERCTMAGENRTVIMYVGSDGGWPNGIALDYVLNRVYW 1491
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
D++ D +I +Y DGS+ +++ Q
Sbjct: 1492 IDARSD----------------SIHTIMY------------------DGSDHHLVIKDQS 1517
Query: 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
A +S +++WTDW I DGSN T+I P G+
Sbjct: 1518 VLAHP---------FSITVFDNYVYWTDWRTYSVIRANKWDGSN-VTVIQKTQSQPFGIQ 1567
Query: 375 LDIATRR 381
+ ++R+
Sbjct: 1568 ILHSSRQ 1574
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 148/311 (47%), Gaps = 57/311 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL-SN 63
C+ + +CDG DC + DE C++ EC+ LC + C P+G C+C PG ++ N
Sbjct: 2980 CIPSSMLCDGANDCGDWKDEKL-CEVNECEVLPNLCDHHCQDRPVGYECSCRPGYVVDKN 3038
Query: 64 DSVTCQDMNEC---EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
D C D++EC P CSQ C NT GSY C+C EG+ L N TC+A + LI
Sbjct: 3039 DHHRCVDLDECNDQHNPRPCSQTCINTHGSYHCACLEGFELR-SNGTCRANSFDRTKLIF 3097
Query: 121 SNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD-SRL--------- 170
SNR+ + DL + I+ L L +DW YW D +RL
Sbjct: 3098 SNRYYLREVDL------NGTMSILAHNLTNAITLDHDWQEQCYYWSDVTRLVTSIKRMCV 3151
Query: 171 ---------------------------------NRIEVCDENGTNRIVLAKDNITQPRGM 197
+ IEV +G R V+ ++ +PR +
Sbjct: 3152 NESDTSGTGAIEVVHRRNLKTPKDWRWTGSDGHDTIEVSRLDGRYRRVIIDRDLQKPRAI 3211
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP R+++WTDWG+ P I R GMDGSN++ +I ++ WPN LT+ T ++++ D+
Sbjct: 3212 ALDPY--RRYMYWTDWGDRPHIGRAGMDGSNQTILIKEQLGWPNALTISFETNQLFWGDA 3269
Query: 258 KLDFIDCKSLE 268
+ D+I L+
Sbjct: 3270 REDYIGVSDLD 3280
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 169/427 (39%), Gaps = 75/427 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALC---TCPPGEI 60
RC+ C+ DC +G+DE D+ C++ +C+ P C C P +
Sbjct: 2935 RCIERNLTCNVNDDCGDGSDE----DVPLCRNTTFICAG-----PDLFRCESGACIPSSM 2985
Query: 61 LSNDSVTCQD--------MNECEQ-PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI 111
L + + C D +NECE P C C + Y CSC GYV++
Sbjct: 2986 LCDGANDCGDWKDEKLCEVNECEVLPNLCDHHCQDRPVGYECSCRPGYVVD--------- 3036
Query: 112 NHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN 171
N H V DL+E H + + ++ + G L
Sbjct: 3037 ---------KNDHHRCV-DLDECNDQHNPRPCSQTCINTHGSYHCACLEGF------ELR 3080
Query: 172 RIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRST 231
C N +R L N R + L+ GT + + I +D +
Sbjct: 3081 SNGTCRANSFDRTKLIFSNRYYLREVDLN---GTMSILAHNL-----TNAITLDHDWQEQ 3132
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
YW + L + +R+ +S D ++E+ N T + W G+
Sbjct: 3133 CY----YWSDVTRLVTSIKRMCVNES--DTSGTGAIEVVHRRNLKTP-KDWRWTGSDGHD 3185
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
I + +DG +++ L + A+ L+ R+++WTDWG+ P I R
Sbjct: 3186 T---IEVSRLDGRYRRVIIDRDLQKPRAIALDPYR---------RYMYWTDWGDRPHIGR 3233
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
GMDGSN++ +I ++ WPN LT+ T ++++ D++ D+I + D GR IL+
Sbjct: 3234 AGMDGSNQTILIKEQLGWPNALTISFETNQLFWGDAREDYIGVSDLD--GRNVRILLSKS 3291
Query: 412 VEFTNDL 418
+ T +L
Sbjct: 3292 AQPTLNL 3298
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 84/148 (56%), Gaps = 7/148 (4%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK-D 189
+E++ D A+++++ +G+AYDW+G +I+W DS N+I RI L
Sbjct: 654 IEQQRLDGTARELLLEAPGSCDGIAYDWLGDNIFWTDSDRNQISALKLRPKPRIRLTVLR 713
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTK---IYWPNGLTL 245
++ P+ ++LDP G W++W+ W + RI+R M+G+ ++ +K I WP GL+L
Sbjct: 714 HLYAPKSIVLDPKQG--WMYWSSWSVPSGRIDRAWMNGTGMEPLVISKERPIEWPTGLSL 771
Query: 246 DIATRRVYFADSKLDFIDCKSLEIKTNV 273
D + R+Y+ D++L I+ +L+ V
Sbjct: 772 DASEGRLYWCDARLGTIESVNLDGSNRV 799
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 76/148 (51%), Gaps = 11/148 (7%)
Query: 148 LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDEN--GTNRIVLAKDNITQPRGMMLDPSPGT 205
L+ V + DW+ G+ Y+LD I VC + +V +PR M LDP+ G
Sbjct: 350 LENVVDIRLDWVSGNWYFLDEEREVIFVCSPQLQHCSIVVETLAETLRPRRMALDPTKG- 408
Query: 206 RWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
+LF++ WG IER +DGSNR++I+ KI P + LD+ + VY+ D+ LD +
Sbjct: 409 -FLFFSKWGNLEASIERSLLDGSNRTSIVLHKIINPLDVALDLVLQHVYWVDTHLDTVQR 467
Query: 265 KSLE------IKTNVNYSTIFRKLYWID 286
+ + ++ ++ F+ LY +D
Sbjct: 468 VNYDGTGRWSLRKRADFMFNFQLLYALD 495
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 99/245 (40%), Gaps = 67/245 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS---------------- 121
G C ++C IC+C+ G V DN TC+ + FLI S
Sbjct: 2216 GGCQELCLFNGTHPICACSHGKVSVRDNKTCEPYEN---FLIFSRQSAIESIHLTDASNI 2272
Query: 122 -----------------------NRHSILVADLEEK--------GKDHRAQDIVVSGLDL 150
+R I +D++ G +HR +V
Sbjct: 2273 NGPIAEIKNASFVKNTIALSYHYDRELIFYSDIDHSTINCVFFNGTNHRR---LVGKQLT 2329
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN------RIVLAKDNIT-----QPRGMML 199
VEGLA+D +YW + I D N + L +D I +PR + +
Sbjct: 2330 VEGLAFDMHTHVLYWTSNNEAAIRSLDLNNASFDDPVANGALVQDVIKLRATDKPRAIAV 2389
Query: 200 DPSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
+P G ++WT+W + P I+R G +II++ I PN LTLD A R++Y+AD+
Sbjct: 2390 EPCLGM--VYWTNWNQQAPSIQRAYPSGYGLESIITSDIQMPNALTLDYAARKLYWADAI 2447
Query: 259 LDFID 263
LD I+
Sbjct: 2448 LDKIE 2452
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 45/224 (20%)
Query: 111 INHSAAFLIISNRHSILVADLEEKGKD----HRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
+ ++ ++R SI + G++ + Q + + +D + G+A DW+ ++YW
Sbjct: 1983 VTQDYVYIADADRGSITRIKRDGSGREVIISNFEQVVDSNTVDWLGGIAIDWVADNVYWT 2042
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226
D + N IEV NG+ R V+A D + P+ + +DP G +LF + I R+G+DG
Sbjct: 2043 DQKRNLIEVARLNGSLRYVVASD-VEGPQLLSIDPIQG--YLF---YASRDTIGRMGLDG 2096
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWID 286
S + I+ K + L LD+ + VY+ + D I W
Sbjct: 2097 SG-NFILVNKSTGISDLALDLDNQVVYWCEMLSDTI---------------------W-- 2132
Query: 287 EGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
K + DG+ +L++G L+ ALDL G +Y++
Sbjct: 2133 -----------KVDYDGNLKRLLLNGTLHSPKALDLFGGSIYWT 2165
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 282 LYWIDEGGNGV-PLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFW 340
LYW + L + A+ D A+ + + + A D + + C ++W
Sbjct: 2342 LYWTSNNEAAIRSLDLNNASFDDPVANGALVQDVIKLRATDKPRAI---AVEPCLGMVYW 2398
Query: 341 TDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
T+W + P I+R G +II++ I PN LTLD A R++Y+AD+ LD I+ +YD
Sbjct: 2399 TNWNQQAPSIQRAYPSGYGLESIITSDIQMPNALTLDYAARKLYWADAILDKIERTDYD- 2457
Query: 400 TGRQQVIL 407
GR +V+L
Sbjct: 2458 -GRHRVVL 2464
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 337 WLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+LF++ WG IER +DGSNR++I+ KI P + LD+ + VY+ D+ LD +
Sbjct: 409 FLFFSKWGNLEASIERSLLDGSNRTSIVLHKIINPLDVALDLVLQHVYWVDTHLDTVQRV 468
Query: 396 NYDGTGRQQV-ILIDLMVEF 414
NYDGTGR + D M F
Sbjct: 469 NYDGTGRWSLRKRADFMFNF 488
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 149/421 (35%), Gaps = 101/421 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ + +CD K DC + +DE G +C C++ C P + +D
Sbjct: 3778 CIRKSLLCDNKDDCGDSSDEKSGL-CQKCPPNSFRCASDSKCIDAALRCDQTPHCLDESD 3836
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYD--NHTCKAINHSAAFLIISN 122
+ C + G CSQ+C KG + C C EGY N +C AI L+ S
Sbjct: 3837 EIGC--IKTGCGFGACSQICVEKKGHFTCRCAEGYAKNGTGRNASCVAIEEPGILLLASE 3894
Query: 123 RHSILVADLEEKGKDHRAQ--DIVVSGLDLVEGLAYD----WIGGH---IYWLDS---RL 170
D R+ D V G L D I H ++W+DS +
Sbjct: 3895 -------------SDFRSLYIDTPVMGYLQTSSLKIDRFDFAITRHNITLFWIDSYDASI 3941
Query: 171 NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIG-MDGSNR 229
N+I + + + P +M+ +RI +DG +
Sbjct: 3942 NKILM-----DTTVKAESSDRRHPGKVMI--------------SRRETYDRIKTLDGKHS 3982
Query: 230 STIISTKI----YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
S ++ P + D T R+Y + K S IF Y
Sbjct: 3983 SVVLKGDADNGDIHPIAIACDWLTERLYVINKK----------------RSNIFVMSY-- 4024
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
NG L ++ +G+ L +D N +L +S ++
Sbjct: 4025 ----NGTEL-----------TTLTATGKHPIDLVVDPVNRLLIWSIME------------ 4057
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
I GMDG + ++ T I W +GL +D T+R+Y+AD + I+ C G + V
Sbjct: 4058 --TIISSGMDGLGKRKLVHTNIEWASGLAIDTTTKRLYWADYRKSTIETCLLLTGGDRHV 4115
Query: 406 I 406
I
Sbjct: 4116 I 4116
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 208 LFWTDWGENP--RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
F + ++P RIE+ +DG+ R ++ +G+ D +++ DS + I
Sbjct: 641 FFSHRYKDSPSFRIEQQRLDGTARELLLEAPGSC-DGIAYDWLGDNIFWTDSDRNQISAL 699
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
L K + T+ R LY +++ LD + G
Sbjct: 700 KLRPKPRIRL-TVLRHLY------------------------------APKSIVLDPKQG 728
Query: 326 MLYYSTLKCTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTK---IYWPNGLTLDIATRR 381
W++W+ W + RI+R M+G+ ++ +K I WP GL+LD + R
Sbjct: 729 -----------WMYWSSWSVPSGRIDRAWMNGTGMEPLVISKERPIEWPTGLSLDASEGR 777
Query: 382 VYFADSKLDFIDFCNYDGTGRQQVILID 409
+Y+ D++L I+ N DG+ R V+L D
Sbjct: 778 LYWCDARLGTIESVNLDGSNR--VLLYD 803
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ I+ S + + L D+ +YW D+ L++IE D +G +R+VLA + P GM +
Sbjct: 2419 ESIITSDIQMPNALTLDYAARKLYWADAILDKIERTDYDGRHRVVLAHSSPKHPFGMAV- 2477
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
LFWTD + I GS+ ++ I P G+ +A +R+
Sbjct: 2478 ---YGDLLFWTDLTVHAVIRANKYSGSD-VVLLRRDIAQPMGI---VAVQRI 2522
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 22/168 (13%)
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE-------IKTNVNYSTIFRKLYWID 286
T++ P L DI+ R+Y+ D +L+ I L + T++ S F + WI
Sbjct: 1652 QTQVVNPAVLDYDISATRLYWNDIQLNEIKSSGLATGPIETVLDTDIANSLGF-AVDWIS 1710
Query: 287 E-----GGNGVPLKIGKANMDGSNASILVSGQL-YEALALDLENGMLYYSTLKCTRWLFW 340
+ GN +I N+ G + L L +L + GM+Y++T + T L+
Sbjct: 1711 KLLYFSTGNETHSRIMVCNLHGEYVTELARDLLLVNSLVVYPTRGMMYFATKRDTPKLY- 1769
Query: 341 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 388
+ MDGS R I ++ Y L LD T R+Y+ S+
Sbjct: 1770 -------ELYASRMDGSERQLISNSTFYPVESLALDFETSRLYYIASR 1810
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 153 GLAYDWIGGHIYWL--DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
G A DWI +Y+ + +RI VC+ +G LA+D + +++ P+ G +++
Sbjct: 1703 GFAVDWISKLLYFSTGNETHSRIMVCNLHGEYVTELARD-LLLVNSLVVYPTRGM--MYF 1759
Query: 211 TDWGENPRIERI---GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK------LDF 261
+ P++ + MDGS R I ++ Y L LD T R+Y+ S+ D
Sbjct: 1760 ATKRDTPKLYELYASRMDGSERQLISNSTFYPVESLALDFETSRLYYIASRPGEIYYYDI 1819
Query: 262 IDCKSLEIKTNVNYS------TIFRKLYWIDEGGNGVPLKIGK 298
K +++ + S T++R+ + D +G ++ K
Sbjct: 1820 SSGKIIQVLPSSENSHPIRTITVYRESIYFDNNQDGRIMRCNK 1862
>gi|449274623|gb|EMC83701.1| Low-density lipoprotein receptor-related protein 4, partial
[Columba livia]
Length = 1885
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/419 (31%), Positives = 187/419 (44%), Gaps = 95/419 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC +G+DE P + C G C+ C CTC
Sbjct: 306 RCIGQRKLCNGANDCGDGSDESPHQNCRPRTGEENCNVNNGGCAQKCQMVRGMVQCTCHT 365
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI------ 111
G L D +CQD+NEC + GYCSQ CTN++G + C C +GY L D +CKA+
Sbjct: 366 GYRLLEDGRSCQDVNECAEEGYCSQGCTNSEGGFQCWCEQGYELRPDKRSCKALGPEPVL 425
Query: 112 -------------NHSAAFLIISNRHSILVADLEEKGK------------------DHRA 140
+ S L+++N + + D +
Sbjct: 426 LFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHSKELVFWSDVTLDRIMRANLNGSNV 485
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+++V +GL+ GLA DWI +YW DS +RIEV + +GT+R VL N+ +PR + L
Sbjct: 486 EEVVSTGLESPGGLAIDWIHDKLYWTDSGTSRIEVANLDGTHRKVLLWQNLEKPRAIALH 545
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P GT ++WTDWG PRIE MDGSNR I T ++WPNGLT+D A R+Y+ D+K
Sbjct: 546 PMEGT--IYWTDWGNTPRIEYSNMDGSNRRIIADTHLFWPNGLTIDYAGHRMYWVDAKHH 603
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
I+ +A++DG N ++S L A+
Sbjct: 604 VIE----------------------------------RADLDGRNRKAVISQGLPHPFAI 629
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ LY WTDW G N+ II K+++P +DI T
Sbjct: 630 TVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 672
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E ++ +T
Sbjct: 1295 KCGFRNGGCSHLCLPHPTGFSCACPTGIQLKRDEQTCDSSPETYLLFSSRASIRRISLDT 1354
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K I ++ FL + R + +++E
Sbjct: 1355 SDHTDVHIPVPELNNVISLDYDSVDGK-IYYTDVFLDVIRRSDLNGSNMET--------- 1404
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IEV +G+ R VL +++ +PR + + P
Sbjct: 1405 VIGQGLKTTDGLAVDWVARNLYWTDTGRNTIEVARLDGSCRKVLINNSLDEPRAIAVFPK 1464
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1465 KG--YLFWTDWGHIAKIERANLDGSERKILINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1520
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I +++G +LVS Q+ AL
Sbjct: 1521 --------------------------------RIESCDLNGKLRQVLVS-QVSHPFALTQ 1547
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1548 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1578
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 145/301 (48%), Gaps = 69/301 (22%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR-------------- 123
G C+ +C + Y C+C G+ + +H+C FL+ + R
Sbjct: 690 GGCTHLCLPSSKDYTCACPTGF-RKTSSHSCA--QSLDKFLLFARRMDIRRISFDTDDLS 746
Query: 124 ---------HSILVADLEEKGK-----------------DHRAQDIVV-SGLDLVEGLAY 156
S + D + K D +Q++VV + L+ GLA
Sbjct: 747 DDVIPLADVRSAVALDWDSKDDYVYWTDVSTDSISRAKWDGSSQEVVVDTSLESPAGLAI 806
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +GT R VL +N+ +PR +++DP G +++WTDWG +
Sbjct: 807 DWVTNKLYWTDAGTDRIEVSNADGTMRTVLIWENLDRPRDIVVDPVGG--FMYWTDWGAS 864
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE-------I 269
P+IER GMD SNR IIS+ + WPNGL +D ++R+Y+AD+ + I+ SL+ I
Sbjct: 865 PKIERAGMDASNRLVIISSNLTWPNGLAIDYESQRLYWADAGMKTIEYASLDGSNRKVLI 924
Query: 270 KTNVNYS---TIF-RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
+N+ + T++ ++YW D + ++ +GQ E L +LEN
Sbjct: 925 GSNLPHPFGLTLYGERIYWTDWQAKSI------------QSADRRTGQARETLQDNLENL 972
Query: 326 M 326
M
Sbjct: 973 M 973
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C+ G CS+ C P P G CTCP G L +D TC PG S + +
Sbjct: 989 CEVNNGGCSHLCLLAPLPKGYSCTCPTGINLQSDGKTCS-------PGMTSFLIFARRTD 1041
Query: 91 -YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRA------QDI 143
+ S + Y + + ++ A + + +D + A +DI
Sbjct: 1042 IRMVSLDIPYFADVVVSVNVTMKNTIAIGVDPREGKVYWSDSTLRKISRAALDGSQFEDI 1101
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR + L
Sbjct: 1102 ITTGLLTTDGLAVDAIGRKLYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIALYHEM 1161
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +++WTDWGEN ++ER GMDGS R +IS + WPNGL +D A ++ +AD+ + I+
Sbjct: 1162 G--YMYWTDWGENAKLERAGMDGSGRVVLISNNLGWPNGLAVDKAGSQLLWADAHTERIE 1219
Query: 264 CKSL 267
L
Sbjct: 1220 AADL 1223
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 109/224 (48%), Gaps = 36/224 (16%)
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI-----------------ISTKIYWPNG 242
D SP T LF I RI +D S+ + + + KIY+ +
Sbjct: 1332 DSSPETYLLF----SSRASIRRISLDTSDHTDVHIPVPELNNVISLDYDSVDGKIYYTD- 1386
Query: 243 LTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMD 302
+ LD+ RR S ++ + + L+ + + R LYW D G N + + A +D
Sbjct: 1387 VFLDV-IRRSDLNGSNMETVIGQGLKTTDGLAVDWVARNLYWTDTGRNTIEV----ARLD 1441
Query: 303 GSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
GS +L++ L E A+ + +LFWTDWG +IER +DGS R +
Sbjct: 1442 GSCRKVLINNSLDEPRAI---------AVFPKKGYLFWTDWGHIAKIERANLDGSERKIL 1492
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I+T + WPNGLTLD TRR+Y+ D+ LD I+ C+ +G RQ ++
Sbjct: 1493 INTDLGWPNGLTLDYDTRRIYWVDAHLDRIESCDLNGKLRQVLV 1536
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 132/331 (39%), Gaps = 94/331 (28%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G CS +C Y C+C G L+ D TC +FLI + R
Sbjct: 994 GGCSHLCLLAPLPKGYSCTCPTGINLQSDGKTCSP--GMTSFLIFARR------------ 1039
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
DI + LD+ Y+ D V+ N+T
Sbjct: 1040 -----TDIRMVSLDIP------------YFAD-----------------VVVSVNVTMKN 1065
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ + P ++W+D +I R +DGS II+T + +GL +D
Sbjct: 1066 TIAIGVDPREGKVYWSD-STLRKISRAALDGSQFEDIITTGLLTTDGLAVD--------- 1115
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
I RKLYW D G N +I N+DGS +LV L
Sbjct: 1116 ---------------------AIGRKLYWTDTGTN----RIEVGNLDGSMRKVLVWQNLD 1150
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
A+ L + M Y ++WTDWGEN ++ER GMDGS R +IS + WPNGL +
Sbjct: 1151 SPRAIALYHEMGY---------MYWTDWGENAKLERAGMDGSGRVVLISNNLGWPNGLAV 1201
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
D A ++ +AD+ + I+ + +G R ++
Sbjct: 1202 DKAGSQLLWADAHTERIEAADLNGANRHTLL 1232
>gi|297268006|ref|XP_001111133.2| PREDICTED: low-density lipoprotein receptor-related protein 4-like
[Macaca mulatta]
Length = 2043
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 190/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 461 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHT 520
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 521 GYRLTEDGHTCQDVNECADEGYCSQGCTNSEGAFQCWCETGYELRPDRRSCKALG-PEPV 579
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 580 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 639
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 640 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 699
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 700 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 757
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 758 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 783
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 784 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 827
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1450 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1509
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1510 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1559
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1560 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1619
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1620 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1675
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1676 --------------------------------RIESADLNGKLRQVLVS-HVSHPFALTQ 1702
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1703 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1733
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 128/248 (51%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L D TC PG S + +
Sbjct: 1144 CAMENGGCSHLCLRSPNPSGFSCTCPTGINLLPDGKTCS-------PGMNSFLIFARRID 1196
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S H I A+L+ G H
Sbjct: 1197 IRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHRISRANLD--GSQH- 1253
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1254 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1312
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +IS + WPNGLT+D A+ ++ +AD+
Sbjct: 1313 YHEMG--FMYWTDWGENAKLERSGMDGSDRTVLISNNLGWPNGLTVDKASSQLLWADAHT 1370
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1371 ERIEAADL 1378
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 140/326 (42%), Gaps = 91/326 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----------- 126
G C+ +C + +Y C+C G+ + +H C FL+ + R I
Sbjct: 845 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTEDLS 901
Query: 127 ----------------------------LVADLEEKGK-DHRAQDIVV-SGLDLVEGLAY 156
+ D + K D Q++VV + L+ GLA
Sbjct: 902 DDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAI 961
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR ++++P G +++WTDWG +
Sbjct: 962 DWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGG--YMYWTDWGAS 1019
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD S R IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 1020 PKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF------- 1067
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
A +DGS +L+ QL L L +Y
Sbjct: 1068 ----------------------AGLDGSKRKVLIGSQLPHPFGLTLYGERIY-------- 1097
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G +R T+
Sbjct: 1098 ---WTDWQTKSIQSADRLTGLDRETL 1120
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1483 GKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1538
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1539 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1594
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1595 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1645
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1646 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1691
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D RI R +DGS II+T + +GL
Sbjct: 1210 VVVPINITMKNTIAIGVDPQEGKVYWSD-STLHRISRANLDGSQHEDIITTGLQTTDGLA 1268
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1269 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1294
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +IS
Sbjct: 1295 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRTVLIS 1345
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1346 NNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1387
>gi|380812746|gb|AFE78247.1| low-density lipoprotein receptor-related protein 4 precursor
[Macaca mulatta]
gi|383409187|gb|AFH27807.1| low-density lipoprotein receptor-related protein 4 precursor
[Macaca mulatta]
Length = 1905
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 190/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 323 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHT 382
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 383 GYRLTEDGHTCQDVNECADEGYCSQGCTNSEGAFQCWCETGYELRPDRRSCKALG-PEPV 441
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 442 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 501
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 502 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 561
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 562 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 619
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 620 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 645
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 646 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 689
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1312 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1371
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1372 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1421
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1422 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1481
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1482 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1537
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1538 --------------------------------RIESADLNGKLRQVLVS-HVSHPFALTQ 1564
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1565 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1595
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 128/248 (51%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L D TC PG S + +
Sbjct: 1006 CAMENGGCSHLCLRSPNPSGFSCTCPTGINLLPDGKTCS-------PGMNSFLIFARRID 1058
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S H I A+L+ G H
Sbjct: 1059 IRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHRISRANLD--GSQH- 1115
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1116 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1174
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +IS + WPNGLT+D A+ ++ +AD+
Sbjct: 1175 YHEMG--FMYWTDWGENAKLERSGMDGSDRTVLISNNLGWPNGLTVDKASSQLLWADAHT 1232
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1233 ERIEAADL 1240
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 48/227 (21%)
Query: 137 DHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D Q++VV + L+ GLA DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR
Sbjct: 803 DGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPR 862
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
++++P G +++WTDWG +P+IER GMD S R IIS+ + WPNGL +D ++R+Y+A
Sbjct: 863 DIVVEPMGG--YMYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWA 920
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ + K++E A +DGS +L+ QL
Sbjct: 921 DAGM-----KTIEF-----------------------------AGLDGSKRKVLIGSQLP 946
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
L L +Y WTDW + G +R T+
Sbjct: 947 HPFGLTLYGERIY-----------WTDWQTKSIQSADRLTGLDRETL 982
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 138/344 (40%), Gaps = 94/344 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G C+ +C + +Y C+C G+ + +H C FL+ + R I + +
Sbjct: 707 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTED-- 761
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
D V+ D+ +A DW DSR + +
Sbjct: 762 --LSDDVIPLADVRSAVALDW--------DSRDDHV------------------------ 787
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+WTD + I R DG+ + ++ T + P GL +D T
Sbjct: 788 -----------YWTDVSTDT-ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTN------- 828
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KLYW D G + +I AN DGS ++L+ L
Sbjct: 829 -----------------------KLYWTDAGTD----RIEVANTDGSMRTVLIWENLDRP 861
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
+ +E Y ++WTDWG +P+IER GMD S R IIS+ + WPNGL +D
Sbjct: 862 RDIVVEPMGGY---------MYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDY 912
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++R+Y+AD+ + I+F DG+ R+ +I L F L G+
Sbjct: 913 GSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQLPHPFGLTLYGE 956
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1345 GKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1400
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1401 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1456
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1457 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1507
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1508 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1553
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D RI R +DGS II+T + +GL
Sbjct: 1072 VVVPINITMKNTIAIGVDPQEGKVYWSD-STLHRISRANLDGSQHEDIITTGLQTTDGLA 1130
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1131 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1156
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +IS
Sbjct: 1157 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRTVLIS 1207
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1208 NNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1249
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 139/334 (41%), Gaps = 52/334 (15%)
Query: 131 LEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + +++S L GLA D+ +YW D+ + IE +G+ R VL
Sbjct: 884 IERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGS 943
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
+ P G+ L G R ++WTDW + G +R T+ N + + +
Sbjct: 944 QLPHPFGLTL---YGER-IYWTDWQTKSIQSADRLTGLDRETLQEN---LENLMDIHVFH 996
Query: 250 RRVYFADS--KLDFIDCKSLEIKT--NVNYS-TIFRKLYWIDEGGNGVP----------- 293
RR + ++ C L +++ +S T + + +G P
Sbjct: 997 RRRPPVSTPCAMENGGCSHLCLRSPNPSGFSCTCPTGINLLPDGKTCSPGMNSFLIFARR 1056
Query: 294 LKIGKANMD---GSNASILVSGQLYEALAL--DLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ I ++D ++ + ++ + +A+ D + G +Y+S R
Sbjct: 1057 IDIRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHR------------ 1104
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I R +DGS II+T + +GL +D R+VY+ D+ + I+ N DG+ R+ ++
Sbjct: 1105 ISRANLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQ 1164
Query: 409 DLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+L + A+ L E G +Y++ G
Sbjct: 1165 NL-----------DSPRAIVLYHEMGFMYWTDWG 1187
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 116/298 (38%), Gaps = 41/298 (13%)
Query: 129 ADLEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
A LE G D + +++S L GL D + W D+ RIE D NG NR L
Sbjct: 1190 AKLERSGMDGSDRTVLISNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1249
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P G+ L S +++WTDW + I R D S +I + P + +
Sbjct: 1250 SP-VQHPYGLTLLDS----YIYWTDW-QTRSIHR--ADKGTGSNVILVRSNLPGLMDIQA 1301
Query: 248 ATRRVYFADSKLDFID--CKSLEIKTNVNYSTIFRKLYWIDEGGN--------------- 290
R +K + C L + +S + G
Sbjct: 1302 VDRAQPLGFNKCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSR 1361
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENPR 348
G +I D ++ + V +L ++LD + +G +YY+ +
Sbjct: 1362 GSIRRISLDTSDHTDVHVPVP-ELNNVISLDYDSVDGKVYYTDVFLD------------V 1408
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I R ++GSN T+I + +GL +D R +Y+ D+ + I+ DG+ R+ +I
Sbjct: 1409 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLI 1466
>gi|355752175|gb|EHH56295.1| hypothetical protein EGM_05672, partial [Macaca fascicularis]
Length = 1905
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 190/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 323 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHT 382
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 383 GYRLTEDGHTCQDVNECADEGYCSQGCTNSEGAFQCWCETGYELRPDRRSCKALG-PEPV 441
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 442 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 501
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 502 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 561
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 562 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 619
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 620 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 645
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 646 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 689
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1312 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1371
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1372 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1421
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1422 VIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1481
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1482 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1537
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1538 --------------------------------RIESADLNGKLRQVLVS-HVSHPFALTQ 1564
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1565 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1595
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 128/248 (51%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L D TC PG S + +
Sbjct: 1006 CAMENGGCSHLCLRSPNPSGFSCTCPTGINLLPDGKTCS-------PGMNSFLIFARRID 1058
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S H I A+L+ G H
Sbjct: 1059 IRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHRISRANLD--GSQH- 1115
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1116 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1174
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +IS + WPNGLT+D A+ ++ +AD+
Sbjct: 1175 YHEMG--FMYWTDWGENAKLERSGMDGSDRTVLISNNLGWPNGLTVDKASSQLLWADAHT 1232
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1233 ERIEAADL 1240
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 48/227 (21%)
Query: 137 DHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D Q++VV + L+ GLA DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR
Sbjct: 803 DGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPR 862
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
++++P G +++WTDWG +P+IER GMD S R IIS+ + WPNGL +D ++R+Y+A
Sbjct: 863 DIVVEPMGG--YMYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWA 920
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ + K++E A +DGS +L+ QL
Sbjct: 921 DAGM-----KTIEF-----------------------------AGLDGSKRKVLIGSQLP 946
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
L L +Y WTDW + G +R T+
Sbjct: 947 HPFGLTLYGERIY-----------WTDWQTKSIQSADRLTGLDRETL 982
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 138/344 (40%), Gaps = 94/344 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G C+ +C + +Y C+C G+ + +H C FL+ + R I + +
Sbjct: 707 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTED-- 761
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
D V+ D+ +A DW DSR + +
Sbjct: 762 --LSDDVIPLADVRSAVALDW--------DSRDDHV------------------------ 787
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+WTD + I R DG+ + ++ T + P GL +D T
Sbjct: 788 -----------YWTDVSTDT-ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTN------- 828
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KLYW D G + +I AN DGS ++L+ L
Sbjct: 829 -----------------------KLYWTDAGTD----RIEVANTDGSMRTVLIWENLDRP 861
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
+ +E Y ++WTDWG +P+IER GMD S R IIS+ + WPNGL +D
Sbjct: 862 RDIVVEPMGGY---------MYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDY 912
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++R+Y+AD+ + I+F DG+ R+ +I L F L G+
Sbjct: 913 GSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQLPHPFGLTLYGE 956
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 109/226 (48%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1345 GKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1400
Query: 254 FADSKLDFI---DCKSLEIKTNVNYST----------IFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I D ++T + + + R LYW D G N I +
Sbjct: 1401 YTDVFLDVIRRADLNGSNMETVIGHGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1456
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1457 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1507
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1508 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1553
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D RI R +DGS II+T + +GL
Sbjct: 1072 VVVPINITMKNTIAIGVDPQEGKVYWSD-STLHRISRANLDGSQHEDIITTGLQTTDGLA 1130
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1131 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1156
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +IS
Sbjct: 1157 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRTVLIS 1207
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1208 NNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1249
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 139/334 (41%), Gaps = 52/334 (15%)
Query: 131 LEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + +++S L GLA D+ +YW D+ + IE +G+ R VL
Sbjct: 884 IERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGS 943
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
+ P G+ L G R ++WTDW + G +R T+ N + + +
Sbjct: 944 QLPHPFGLTL---YGER-IYWTDWQTKSIQSADRLTGLDRETLQEN---LENLMDIHVFH 996
Query: 250 RRVYFADS--KLDFIDCKSLEIKT--NVNYS-TIFRKLYWIDEGGNGVP----------- 293
RR + ++ C L +++ +S T + + +G P
Sbjct: 997 RRRPPVSTPCAMENGGCSHLCLRSPNPSGFSCTCPTGINLLPDGKTCSPGMNSFLIFARR 1056
Query: 294 LKIGKANMD---GSNASILVSGQLYEALAL--DLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ I ++D ++ + ++ + +A+ D + G +Y+S R
Sbjct: 1057 IDIRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHR------------ 1104
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I R +DGS II+T + +GL +D R+VY+ D+ + I+ N DG+ R+ ++
Sbjct: 1105 ISRANLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQ 1164
Query: 409 DLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+L + A+ L E G +Y++ G
Sbjct: 1165 NL-----------DSPRAIVLYHEMGFMYWTDWG 1187
>gi|195395738|ref|XP_002056491.1| GJ10197 [Drosophila virilis]
gi|194143200|gb|EDW59603.1| GJ10197 [Drosophila virilis]
Length = 1071
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 174/342 (50%), Gaps = 67/342 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ L+KVCD + DCP+G DE G C EC K G C + C +G C C G LS
Sbjct: 487 QCIALSKVCDKRKDCPDGEDEPAGKCGQNECSAKNGGCMHRCVDHLVGYSCDCHEGYKLS 546
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D +C D+NECE+PG CSQ+C N G + C C GY+ + NHT CKA A+ L+++
Sbjct: 547 EDGHSCDDVNECERPGVCSQICVNEIGGFKCECEAGYMRDPRNHTRCKATEGHAS-LLLA 605
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 606 RRH-----DIRKIALDHMEMTSIVNNTKSATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 660
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + +G VL +D + PR +
Sbjct: 661 NEKTVVLKQSSVTSDGLAVDWIYNHVYYTDTHKCTIELTNFDGNMGKVLIEDALDIPRSI 720
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TII+ + WPNG+TLD+ +R+Y+ D
Sbjct: 721 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIINYDVKWPNGITLDLVRKRIYWVDG 778
Query: 258 KLDFIDCKSLE--IKTNVNYSTIFRK-----------LYWID 286
KL+ I + + + + YST + + +YW D
Sbjct: 779 KLNVISSANYDGSQRRQILYSTEYLRHPFSISTFEDYIYWTD 820
>gi|332259826|ref|XP_003278984.1| PREDICTED: low-density lipoprotein receptor-related protein 4
[Nomascus leucogenys]
Length = 1946
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 191/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 364 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGVVQCTCHT 423
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 424 GYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYELRPDRRSCKALG-PEPV 482
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 483 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 542
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 543 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 602
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 603 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 660
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 661 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 686
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 687 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 730
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1353 KCGPRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1412
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L++D+ K + ++ FL + R + +++E
Sbjct: 1413 SDHTDVHVPVPELNNVISLDFDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1462
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1463 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1522
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1523 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1578
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1579 --------------------------------RIESADLNGKLRQVLVS-HVSHPFALTQ 1605
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1606 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1636
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 48/227 (21%)
Query: 137 DHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D Q++VV + L+ GLA DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR
Sbjct: 844 DGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPR 903
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
++++P G +++WTDWG +P+IER GMD S R IIS+ + WPNGL +D ++R+Y+A
Sbjct: 904 DIVVEPMGG--YMYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWA 961
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ + K++E A +DGS +L+ QL
Sbjct: 962 DAGM-----KTIEF-----------------------------AGLDGSKRKVLIGSQLP 987
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
L L +Y WTDW + G +R T+
Sbjct: 988 HPFGLTLYGERIY-----------WTDWQTKSIQSADRLTGLDRETL 1023
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 128/248 (51%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L +D TC PG S + +
Sbjct: 1047 CAVENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCS-------PGMNSFLIFARRID 1099
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S H I A+L+ G H
Sbjct: 1100 IRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHRISRANLD--GSQH- 1156
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1157 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1215
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D + ++ +AD+
Sbjct: 1216 YHEMG--FMYWTDWGENAKLERSGMDGSDRAVLINNNLGWPNGLTVDKTSSQLLWADAHT 1273
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1274 ERIEAADL 1281
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1386 GKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDFDSVDGKVY 1441
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1442 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1497
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1498 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1548
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1549 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1594
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 138/344 (40%), Gaps = 94/344 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G C+ +C + +Y C+C G+ + +H C FL+ + R I + +
Sbjct: 748 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTED-- 802
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
D V+ D+ +A DW DSR + +
Sbjct: 803 --LSDDVIPLADVRSAVALDW--------DSRDDHV------------------------ 828
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+WTD + I R DG+ + ++ T + P GL +D T
Sbjct: 829 -----------YWTDVSTDT-ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTN------- 869
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KLYW D G + +I AN DGS ++L+ L
Sbjct: 870 -----------------------KLYWTDAGTD----RIEVANTDGSMRTVLIWENLDRP 902
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
+ +E Y ++WTDWG +P+IER GMD S R IIS+ + WPNGL +D
Sbjct: 903 RDIVVEPMGGY---------MYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDY 953
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++R+Y+AD+ + I+F DG+ R+ +I L F L G+
Sbjct: 954 GSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQLPHPFGLTLYGE 997
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 105/222 (47%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D RI R +DGS II+T + +GL
Sbjct: 1113 VVVPINITMKNTIAIGVDPQEGKVYWSD-STLHRISRANLDGSQHEDIITTGLQTTDGLA 1171
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1172 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1197
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+
Sbjct: 1198 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRAVLIN 1248
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D + ++ +AD+ + I+ + +G R ++
Sbjct: 1249 NNLGWPNGLTVDKTSSQLLWADAHTERIEAADLNGANRHTLV 1290
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 139/334 (41%), Gaps = 52/334 (15%)
Query: 131 LEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + +++S L GLA D+ +YW D+ + IE +G+ R VL
Sbjct: 925 IERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGS 984
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
+ P G+ L G R ++WTDW + G +R T+ N + + +
Sbjct: 985 QLPHPFGLTL---YGER-IYWTDWQTKSIQSADRLTGLDRETLQEN---LENLMDIHVFH 1037
Query: 250 RRVYFADS--KLDFIDCKSLEIKT--NVNYS-TIFRKLYWIDEGGNGVP----------- 293
RR + ++ C L +++ +S T + + +G P
Sbjct: 1038 RRRPPVSTPCAVENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCSPGMNSFLIFARR 1097
Query: 294 LKIGKANMD---GSNASILVSGQLYEALAL--DLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ I ++D ++ + ++ + +A+ D + G +Y+S R
Sbjct: 1098 IDIRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHR------------ 1145
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I R +DGS II+T + +GL +D R+VY+ D+ + I+ N DG+ R+ ++
Sbjct: 1146 ISRANLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQ 1205
Query: 409 DLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+L + A+ L E G +Y++ G
Sbjct: 1206 NL-----------DSPRAIVLYHEMGFMYWTDWG 1228
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 116/298 (38%), Gaps = 41/298 (13%)
Query: 129 ADLEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
A LE G D + ++++ L GL D + W D+ RIE D NG NR L
Sbjct: 1231 AKLERSGMDGSDRAVLINNNLGWPNGLTVDKTSSQLLWADAHTERIEAADLNGANRHTLV 1290
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P G+ L S +++WTDW + I R D S +I + P + +
Sbjct: 1291 SP-VQHPYGLTLLDS----YIYWTDW-QTRSIHR--ADKGTGSNVILVRSNLPGLMDIQA 1342
Query: 248 ATRRVYFADSKLDFID--CKSLEIKTNVNYSTIFRKLYWIDEGGN--------------- 290
R +K + C L + +S + G
Sbjct: 1343 VDRAQPLGFNKCGPRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSR 1402
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENPR 348
G +I D ++ + V +L ++LD + +G +YY+ +
Sbjct: 1403 GSIRRISLDTSDHTDVHVPVP-ELNNVISLDFDSVDGKVYYTDVFLD------------V 1449
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I R ++GSN T+I + +GL +D R +Y+ D+ + I+ DG+ R+ +I
Sbjct: 1450 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLI 1507
>gi|402893655|ref|XP_003910007.1| PREDICTED: low-density lipoprotein receptor-related protein 4
[Papio anubis]
Length = 1905
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 190/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 323 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHT 382
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 383 GYRLTEDGHTCQDVNECADEGYCSQGCTNSEGAFQCWCETGYELRPDRRSCKALG-PEPV 441
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 442 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 501
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 502 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 561
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 562 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 619
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 620 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 645
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 646 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 689
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1312 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1371
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1372 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1421
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1422 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1481
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1482 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1537
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1538 --------------------------------RIESADLNGKLRQVLVS-HVSHPFALTQ 1564
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1565 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1595
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 128/248 (51%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L D TC PG S + +
Sbjct: 1006 CAMENGGCSHLCLRSPNPSGFSCTCPTGINLLPDGKTCS-------PGMNSFLIFARRID 1058
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S H I A+L+ G H
Sbjct: 1059 IRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHRISRANLD--GSQH- 1115
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1116 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1174
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +IS + WPNGLT+D A+ ++ +AD+
Sbjct: 1175 YHEMG--FMYWTDWGENAKLERSGMDGSDRTVLISNNLGWPNGLTVDKASSQLLWADAHT 1232
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1233 ERIEAADL 1240
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 48/227 (21%)
Query: 137 DHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D Q++VV + L+ GLA DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR
Sbjct: 803 DGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPR 862
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
++++P G +++WTDWG +P+IER GMD S R IIS+ + WPNGL +D ++R+Y+A
Sbjct: 863 DIVVEPMGG--YMYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWA 920
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ + K++E A +DGS +L+ QL
Sbjct: 921 DAGM-----KTIEF-----------------------------AGLDGSKRKVLIGSQLP 946
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
L L +Y WTDW + G +R T+
Sbjct: 947 HPFGLTLYGERIY-----------WTDWQTKSIQSADRLTGLDRETL 982
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 138/344 (40%), Gaps = 94/344 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G C+ +C + +Y C+C G+ + +H C FL+ + R I + +
Sbjct: 707 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTED-- 761
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
D V+ D+ +A DW DSR + +
Sbjct: 762 --LSDDVIPLADVRSAVALDW--------DSRDDHV------------------------ 787
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+WTD + I R DG+ + ++ T + P GL +D T
Sbjct: 788 -----------YWTDVSTDT-ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTN------- 828
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KLYW D G + +I AN DGS ++L+ L
Sbjct: 829 -----------------------KLYWTDAGTD----RIEVANTDGSMRTVLIWENLDRP 861
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
+ +E Y ++WTDWG +P+IER GMD S R IIS+ + WPNGL +D
Sbjct: 862 RDIVVEPMGGY---------MYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDY 912
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++R+Y+AD+ + I+F DG+ R+ +I L F L G+
Sbjct: 913 GSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQLPHPFGLTLYGE 956
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1345 GKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1400
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1401 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1456
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1457 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1507
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1508 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1553
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D RI R +DGS II+T + +GL
Sbjct: 1072 VVVPINITMKNTIAIGVDPQEGKVYWSD-STLHRISRANLDGSQHEDIITTGLQTTDGLA 1130
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1131 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1156
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +IS
Sbjct: 1157 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRTVLIS 1207
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1208 NNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1249
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 139/334 (41%), Gaps = 52/334 (15%)
Query: 131 LEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + +++S L GLA D+ +YW D+ + IE +G+ R VL
Sbjct: 884 IERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGS 943
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
+ P G+ L G R ++WTDW + G +R T+ N + + +
Sbjct: 944 QLPHPFGLTL---YGER-IYWTDWQTKSIQSADRLTGLDRETLQEN---LENLMDIHVFH 996
Query: 250 RRVYFADS--KLDFIDCKSLEIKT--NVNYS-TIFRKLYWIDEGGNGVP----------- 293
RR + ++ C L +++ +S T + + +G P
Sbjct: 997 RRRPPVSTPCAMENGGCSHLCLRSPNPSGFSCTCPTGINLLPDGKTCSPGMNSFLIFARR 1056
Query: 294 LKIGKANMD---GSNASILVSGQLYEALAL--DLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ I ++D ++ + ++ + +A+ D + G +Y+S R
Sbjct: 1057 IDIRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHR------------ 1104
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I R +DGS II+T + +GL +D R+VY+ D+ + I+ N DG+ R+ ++
Sbjct: 1105 ISRANLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQ 1164
Query: 409 DLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+L + A+ L E G +Y++ G
Sbjct: 1165 NL-----------DSPRAIVLYHEMGFMYWTDWG 1187
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 115/298 (38%), Gaps = 41/298 (13%)
Query: 129 ADLEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
A LE G D + +++S L GL D + W D+ RIE D NG NR L
Sbjct: 1190 AKLERSGMDGSDRTVLISNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1249
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P G+ L S ++WTDW + I R D S +I + P + +
Sbjct: 1250 SP-VQHPYGLTLLDSH----IYWTDW-QTRSIHR--ADKGTGSNVILVRSNLPGLMDIQA 1301
Query: 248 ATRRVYFADSKLDFID--CKSLEIKTNVNYSTIFRKLYWIDEGGN--------------- 290
R +K + C L + +S + G
Sbjct: 1302 VDRAQPLGFNKCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSR 1361
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENPR 348
G +I D ++ + V +L ++LD + +G +YY+ +
Sbjct: 1362 GSIRRISLDTSDHTDVHVPVP-ELNNVISLDYDSVDGKVYYTDVFLD------------V 1408
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I R ++GSN T+I + +GL +D R +Y+ D+ + I+ DG+ R+ +I
Sbjct: 1409 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLI 1466
>gi|195153014|ref|XP_002017427.1| GL22298 [Drosophila persimilis]
gi|194112484|gb|EDW34527.1| GL22298 [Drosophila persimilis]
Length = 1070
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 173/345 (50%), Gaps = 67/345 (19%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGE 59
V +C+ L KVC+ + DCP+G DE G C + EC K G C + C +G C C G
Sbjct: 537 VGGQCIALDKVCNKRKDCPDGEDEPAGKCGVNECASKNGGCMHQCIDQVVGYKCECRKGY 596
Query: 60 ILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFL 118
LS D TC D++ECE PG CSQ+C N G + C C GY+ + NHT CKA A L
Sbjct: 597 KLSGDKRTCVDIDECENPGTCSQLCINEIGGFKCECEAGYMRDPRNHTRCKA-GEGHASL 655
Query: 119 IISNRHSILVADLEEKGKDHRAQDIVV------SGLDLV--------------------- 151
+++ RH D+ + DH +V + LD V
Sbjct: 656 LLARRH-----DIRKIALDHMEMTSIVNSTKSATALDFVFRTGMIFWSDVTTQSIYKAPI 710
Query: 152 -----------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
+GLA DWI H+Y+ D+ IE+ + +G VL +D + P
Sbjct: 711 DEGNEKTVVLKQSSVTSDGLAVDWIYNHVYYTDTHKCTIELTNFDGNMGKVLIEDALDIP 770
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
R + LDP G W++W+DWG +PRIER GMDGS+R+TIIS + WPNG+TLD+ +R+Y+
Sbjct: 771 RSIALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVRKRIYW 828
Query: 255 ADSKLDFIDCKSLE--IKTNVNYSTIFRK-----------LYWID 286
D KL+ I + + + + YST + + +YW D
Sbjct: 829 VDGKLNVISSANYDGSQRRQILYSTEYLRHPFSITTFEDYIYWTD 873
>gi|158300186|ref|XP_320185.4| AGAP012372-PA [Anopheles gambiae str. PEST]
gi|157013036|gb|EAA00393.5| AGAP012372-PA [Anopheles gambiae str. PEST]
Length = 4718
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 157/308 (50%), Gaps = 49/308 (15%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V ++C+ +T++C+G+TDCP+G DEG C C CS+ CH P G +C+CP
Sbjct: 1154 VTNQCIKVTQLCNGRTDCPDGTDEGFRCAEKLCDAP-NDCSHACHNAPEGLICSCPAHLF 1212
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
L + C + C+ G CSQ+CT Y C C EGY L YD TC++ N + ++I
Sbjct: 1213 LQPNGRDCGHDHACDNWGTCSQICTKAGTHYRCGCVEGYTLMYDKFTCRSNNGDSPYVIF 1272
Query: 121 SNRHSILVADLEEKG---------------------------------KDHRA------- 140
SNR IL DL G K +R
Sbjct: 1273 SNRQEILGVDLNTLGVRSFYTSLRNTIALDFLYRNESVQIFWSDVMDDKIYRGTLRNDTL 1332
Query: 141 ---QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+ +V SGL EGLA DWIG +IYW+DS L++IEV NG+ R L ++ PR +
Sbjct: 1333 SNVEAVVQSGLSTAEGLAVDWIGMNIYWIDSNLDQIEVAKTNGSFRRTLVAGDMVNPRAI 1392
Query: 198 MLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTI--ISTKIYWPNGLTLDIATRRVYF 254
LDP G LFWTDW E +PR+ER M G NR+ I + + WPNG+ LD RRVY+
Sbjct: 1393 ALDPMEGV--LFWTDWEEGSPRLERCTMAGENRTVIKYVGSDGGWPNGIALDYIPRRVYW 1450
Query: 255 ADSKLDFI 262
D++ D I
Sbjct: 1451 IDARSDSI 1458
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 158/311 (50%), Gaps = 51/311 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EILSN 63
C+ +CDG DC + +DE C + EC+ LC++ C P+G C C G + N
Sbjct: 2940 CITSNMLCDGANDCGDWSDE-KSCQVNECEMIPDLCAHECEDRPVGYECVCRKGFRVNVN 2998
Query: 64 DSVTCQDMNEC--EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHS--AAFLI 119
D C D++EC +QP C+Q C NT GSY C+C +G+VL DN TC+A LI
Sbjct: 2999 DKHLCVDVDECTEQQPRPCTQTCVNTHGSYHCTCLDGFVLR-DNDTCRAEGRHILPPKLI 3057
Query: 120 ISNRHSILVADLE-----------------------------------------EKGKDH 138
SNR+ + DL E G+++
Sbjct: 3058 FSNRYYLREVDLSGGMTILAHNLTNAITLDFDWKDECYYWSDVTRTVTTVKRMCESGEEN 3117
Query: 139 RAQDIV-VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
R +++ + L EGLA DW+G ++YW D L+ IEV +G R VL + +PR +
Sbjct: 3118 RPVEVIHRTNLKNPEGLAVDWVGRNLYWCDKGLDTIEVSKLDGRYRRVLINKELQKPRAI 3177
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP R+++WTDWG+ P I R GMDGSN++ +I ++ WPN LT+ T ++++ D+
Sbjct: 3178 ALDPY--RRYMYWTDWGDQPHIGRAGMDGSNQTILIKEQLGWPNALTISFETNQLFWGDA 3235
Query: 258 KLDFIDCKSLE 268
+ D+I L+
Sbjct: 3236 REDYIAVSDLD 3246
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 142/328 (43%), Gaps = 75/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLC-----SNTCHPTPLGALCTCPPG 58
+C+ + + CDG DC N D A C S C T GA C C
Sbjct: 108 KCLEIDRFCDGAWDCSNDELNCSSNDTATASAPTSACDALKCSYDCRLTSEGARCFCAK- 166
Query: 59 EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN------ 112
+ N SV C+D +EC+ G C QMC N G+Y CSC GYV + +TC A+N
Sbjct: 167 DSQPNGSV-CEDFDECQIEGLCDQMCKNQPGAYQCSCTTGYVRQ--GNTCTAVNLPKDEP 223
Query: 113 --------HSAAFLIISNRHSILVAD-----------LEEKGKDHRAQDIV--------- 144
+ + ISNR S+L + L++ RA ++V
Sbjct: 224 TSLFFTTFNKVKKVSISNRTSVLAGNFPTNETVEEEYLKQPNPRIRAMEMVHRNRTFCLA 283
Query: 145 -VSGLDLVE--------------------------GLAYDWIGGHIYWLDSRLNRIEVCD 177
+ G L+E + DW+ G+ Y+LD + I VC
Sbjct: 284 RIDGKSLLECYSVDNTSHSWVMPRPDLFPNLEDIVDIRLDWVSGNWYYLDQQREIIFVCS 343
Query: 178 ENGTN--RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIIS 234
+ IV A + +PR M LDP+ G +LF++ WG + IER +DG+NR++I+
Sbjct: 344 PQMVHCAIIVEALSEVLRPRRMALDPTKG--FLFFSKWGSGDVSIERSLLDGTNRTSIVL 401
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
KI P + LD+ + VY+ D+ LD +
Sbjct: 402 NKIITPLDIALDLVMQHVYWVDTHLDTV 429
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 166/419 (39%), Gaps = 89/419 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
RC+ C+ DC +G+DE D+ C++ +C+ L C G +++
Sbjct: 2895 RCIERNLTCNVNDDCADGSDE----DIRLCRNTTLICAGP-------DLFRCESGACITS 2943
Query: 64 --------------DSVTCQDMNECEQ-PGYCSQMCTNTKGSYICSCNEGYVLEY-DNHT 107
D +CQ +NECE P C+ C + Y C C +G+ + D H
Sbjct: 2944 NMLCDGANDCGDWSDEKSCQ-VNECEMIPDLCAHECEDRPVGYECVCRKGFRVNVNDKHL 3002
Query: 108 CKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD 167
C ++ + G H + G L + G HI L
Sbjct: 3003 CVDVDECTE----QQPRPCTQTCVNTHGSYHCT---CLDGFVLRDNDTCRAEGRHI--LP 3053
Query: 168 SRL---NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN----PRIE 220
+L NR + + + + + + N+T + LD +W+D R+
Sbjct: 3054 PKLIFSNRYYLREVDLSGGMTILAHNLTN--AITLDFDWKDECYYWSDVTRTVTTVKRMC 3111
Query: 221 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFR 280
G + I T + P GL +D + R
Sbjct: 3112 ESGEENRPVEVIHRTNLKNPEGLAVDW------------------------------VGR 3141
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFW 340
LYW D+G + + + + +DG +L++ +L + A+ L+ R+++W
Sbjct: 3142 NLYWCDKGLDTIEV----SKLDGRYRRVLINKELQKPRAIALDPYR---------RYMYW 3188
Query: 341 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
TDWG+ P I R GMDGSN++ +I ++ WPN LT+ T ++++ D++ D+I + DG
Sbjct: 3189 TDWGDQPHIGRAGMDGSNQTILIKEQLGWPNALTISFETNQLFWGDAREDYIAVSDLDG 3247
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 96/206 (46%), Gaps = 42/206 (20%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
+E + D +++++ +G++YDW+G +I+W DS N I V
Sbjct: 619 IEAQKLDGTQRELLLESPGSCDGISYDWLGNNIFWTDSDRNHISVIKLGPKRMRYTVLRQ 678
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTK---IYWPNGLTLD 246
+ P+ +++DP G W++W+ W + RI+R M+G+ ++S+K I WP GL++D
Sbjct: 679 LYAPKSIVVDPKQG--WMYWSSWSVPSGRIDRAWMNGTQPELLVSSKERPIEWPTGLSID 736
Query: 247 IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
+ +R+Y+ D++L FI+ N+DGSN
Sbjct: 737 MIQKRLYWCDARLSFIE----------------------------------SINLDGSNR 762
Query: 307 SILVSG--QLYEALALDLENGMLYYS 330
+L G Q +AL + +LY++
Sbjct: 763 VLLFDGRSQNQFPVALAVHRQLLYFA 788
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 161/449 (35%), Gaps = 108/449 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-GPGCDLAECKHKFGLCSN-TCHPTPL------------ 49
+C+ + VCDG DC + +DE G C C + C+N C L
Sbjct: 3701 KCILSSWVCDGIDDCLDNSDEMGEYCKEHGCNKRAFRCANRNCIRKSLMCDNKDDCGDNS 3760
Query: 50 ---GALC-TCPPGEILSNDSVTCQDMN-ECEQP-------------------GYCSQMCT 85
ALC CPP N C D+ C+Q G CSQ+C
Sbjct: 3761 DEKSALCHKCPPNSFRCNSDSKCIDIALRCDQTPHCLDESDEIGCIKTGCGFGACSQLCI 3820
Query: 86 NTKGSYICSCNEGYVL--EYDNHTCKAINHSAAFLIISNR-HSILVADLEEKGKDHRAQD 142
KG Y C C EGYV N TC A++ L+ S L AD G +
Sbjct: 3821 EKKGHYTCRCAEGYVKGGPGRNATCVAVDEQGILLVASESDFRSLYADTPVMGY-LQTSS 3879
Query: 143 IVVSGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+ + D + WI + ++ L V D +R RG+
Sbjct: 3880 LKIDRFDFAITRHNITLFWIDSYDTSINKILMDTTVKDGGDYSRSPPVDKRKIVRRGLGP 3939
Query: 200 DPSPGTRWLFWTDWGENPRIERIG-MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
P+P P +RI +DG + S ++ P + D T R+Y + K
Sbjct: 3940 APAP-------------PSYDRIKTLDGKHSSVVLKDDEIHPIAIACDWLTERLYVINKK 3986
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL-VSGQLYEA 317
S IF + +G+N + L +G+
Sbjct: 3987 ----------------RSNIF------------------VMSFNGTNHTTLTATGKHPID 4012
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
L +D +GM+ +S ++ I GMDG + ++ T + W +GL +D
Sbjct: 4013 LVVDPVSGMMVWSIME--------------TIISSGMDGRGKQKLVHTNVEWASGLAIDT 4058
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
T+R+Y+AD + I+ C G + VI
Sbjct: 4059 TTKRLYWADYRKSTIETCLLLTGGDRHVI 4087
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 161/409 (39%), Gaps = 90/409 (22%)
Query: 111 INHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSG---------LDLVEGLAYDWIGG 161
+ H ++ ++R SI +D A+++++S LD + G+A DW+
Sbjct: 1948 VAHDYVYIADTDRGSIT-----RIKRDGSAREVIISNFEQVVDGSTLDWLGGIAIDWVAE 2002
Query: 162 HIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIER 221
+IYW D + N IEV NGT R V+A D + P+ + +DP G +LF+ G I R
Sbjct: 2003 NIYWTDQKRNLIEVARLNGTLRYVVASD-VESPQLLAIDPIQG--YLFYVTRGT---IGR 2056
Query: 222 IGMDGS------NRSTIIS--------TKIYW--------------------------PN 241
+G+DGS NRS+ IS +YW N
Sbjct: 2057 MGLDGSGNFILVNRSSAISDLALDLDNQVVYWCETSTDTIWKVDYDGNLKRLLLNGTSHN 2116
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+LD+ +Y+ADS+ + + I NY ++ L E + +K+ +
Sbjct: 2117 PKSLDLFGDSIYWADSRGNIYEAGLSNI---FNYRSVVEAL----EVSSLKDIKVFSSRK 2169
Query: 302 DGSNASILVSGQLYEALAL--------DLENGMLYYSTLK-CTRWLFWTDWGENPRIERI 352
+ VS + L L +G + + LK C + + + IE I
Sbjct: 2170 QSKTNACGVSNGGCQELCLFNGTHPICACSHGKISSADLKTCEPYENFLIFSRQSAIESI 2229
Query: 353 GMDGSNRST----IISTKIYWPN--GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
M +N I Y N L+ D + ++++D I+ ++GT ++++
Sbjct: 2230 HMTDANNINGPIPEIKNSSYLKNTIALSYDYEQQLIFYSDIDHSTINCVFFNGTNHRRIV 2289
Query: 407 LIDLMVE------FTNDLM--GDNGVPALALDLENGMLYYSTEGAEFLK 447
L VE T L +N +LDL L AE ++
Sbjct: 2290 TKQLTVEGLAFNVLTRVLFWTSNNEAAIRSLDLNKASLTDPAANAELVQ 2338
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 88/174 (50%), Gaps = 34/174 (19%)
Query: 273 VNYSTIFRKLYWIDEGGNGVP-LKIGKANMDGSNASILVSGQLY--EALALDLENGMLYY 329
++Y + ++W D N + +K+G M V QLY +++ +D + G
Sbjct: 642 ISYDWLGNNIFWTDSDRNHISVIKLGPKRM-----RYTVLRQLYAPKSIVVDPKQG---- 692
Query: 330 STLKCTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTK---IYWPNGLTLDIATRRVYFA 385
W++W+ W + RI+R M+G+ ++S+K I WP GL++D+ +R+Y+
Sbjct: 693 -------WMYWSSWSVPSGRIDRAWMNGTQPELLVSSKERPIEWPTGLSIDMIQKRLYWC 745
Query: 386 DSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYS 439
D++L FI+ N DG+ R V+L D + N P +AL + +LY++
Sbjct: 746 DARLSFIESINLDGSNR--VLLFDGRSQ--------NQFP-VALAVHRQLLYFA 788
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 19/176 (10%)
Query: 242 GLTLDIATRRVYFADSKLDFIDC-------------KSLEIKTNVNYSTIFRKLYWIDEG 288
L+ D + ++++D I+C K L ++ + ++ + R L+W
Sbjct: 2255 ALSYDYEQQLIFYSDIDHSTINCVFFNGTNHRRIVTKQLTVE-GLAFNVLTRVLFWTSNN 2313
Query: 289 GNGV-PLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
+ L + KA++ A+ + + + A D G+ + C ++WT+W ++
Sbjct: 2314 EAAIRSLDLNKASLTDPAANAELVQDVIKLRATDKPRGI---AVEPCLAMVYWTNWNQHA 2370
Query: 348 -RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
I+R G +II++ I PN LTLD R++Y+AD+ LD ++ +YDG R
Sbjct: 2371 ASIQRAYPSGYGLESIITSDIQMPNALTLDYQARKLYWADALLDKVERTDYDGKHR 2426
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 100/245 (40%), Gaps = 67/245 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----------- 126
G C ++C IC+C+ G + D TC+ + FLI S + +I
Sbjct: 2181 GGCQELCLFNGTHPICACSHGKISSADLKTCEPYEN---FLIFSRQSAIESIHMTDANNI 2237
Query: 127 ------------------LVADLEEK------------------GKDHRAQDIVVSGLDL 150
L D E++ G +HR +V+
Sbjct: 2238 NGPIPEIKNSSYLKNTIALSYDYEQQLIFYSDIDHSTINCVFFNGTNHRR---IVTKQLT 2294
Query: 151 VEGLAYDWIGGHIYWLDSR--------LNRIEVCDENGTNRIV---LAKDNITQPRGMML 199
VEGLA++ + ++W + LN+ + D +V + +PRG+ +
Sbjct: 2295 VEGLAFNVLTRVLFWTSNNEAAIRSLDLNKASLTDPAANAELVQDVIKLRATDKPRGIAV 2354
Query: 200 DPSPGTRWLFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
+P ++WT+W ++ I+R G +II++ I PN LTLD R++Y+AD+
Sbjct: 2355 EPCLAM--VYWTNWNQHAASIQRAYPSGYGLESIITSDIQMPNALTLDYQARKLYWADAL 2412
Query: 259 LDFID 263
LD ++
Sbjct: 2413 LDKVE 2417
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 337 WLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+LF++ WG + IER +DG+NR++I+ KI P + LD+ + VY+ D+ LD +
Sbjct: 373 FLFFSKWGSGDVSIERSLLDGTNRTSIVLNKIITPLDIALDLVMQHVYWVDTHLDTVQRV 432
Query: 396 NYDGTGR 402
NYDG+GR
Sbjct: 433 NYDGSGR 439
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 31/191 (16%)
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE-------IKTNVNYSTIFRKLYWID 286
T++ P L DI+ R+Y+ D +L+ I L + T+++ S F + WI
Sbjct: 1611 QTQVVQPAVLDYDISAARLYWNDIQLNEIKSSGLATGPIETILDTDISNSLGF-AVDWIS 1669
Query: 287 E-----GGNGVPLKIGKANMDGSNASILVSG-QLYEALALDLENGMLYYSTLKCTRWLFW 340
+ GN +I +N++G + + G + +L + GM+Y++T+
Sbjct: 1670 KLLYFSTGNETHSRIMVSNLNGEFVTEIADGLSVVNSLVVYPTRGMMYFATM-------- 1721
Query: 341 TDWGENPRIERI---GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
E P++ + MDGS R I ++ + + L LD T R+Y+ S I++ Y
Sbjct: 1722 ---SEVPKLYELYASRMDGSERQLISNSTFHPIDSLALDFETNRLYYISSNAGEINY--Y 1776
Query: 398 D-GTGRQQVIL 407
D G+G+ +L
Sbjct: 1777 DIGSGKIIQVL 1787
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 7/123 (5%)
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
N+H+ + G + + I+ S + + L D+ +YW D+ L+++E D +G
Sbjct: 2367 NQHAASIQRAYPSG--YGLESIITSDIQMPNALTLDYQARKLYWADALLDKVERTDYDGK 2424
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
+R+VLA P + + LFWTD + I GS+ ++ I P
Sbjct: 2425 HRVVLAHSTPKHPFALAV----FGDLLFWTDLTVHAVIRANKYSGSD-IVLLRRDIAQPM 2479
Query: 242 GLT 244
G+
Sbjct: 2480 GIV 2482
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 29/232 (12%)
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST 277
RIE +DG+ R ++ + +G++ D +++ DS + I L K + Y T
Sbjct: 618 RIEAQKLDGTQRELLLESPGSC-DGISYDWLGNNIFWTDSDRNHISVIKLGPK-RMRY-T 674
Query: 278 IFRKLY------------WIDEGGNGVPL-KIGKANMDGSNASILVSGQLYEALALDLEN 324
+ R+LY W+ VP +I +A M+G+ +LVS + ++
Sbjct: 675 VLRQLYAPKSIVVDPKQGWMYWSSWSVPSGRIDRAWMNGTQPELLVSSK---ERPIEWPT 731
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384
G+ S + L+W D IE I +DGSNR + + + L + + +YF
Sbjct: 732 GL---SIDMIQKRLYWCD-ARLSFIESINLDGSNRVLLFDGRSQNQFPVALAVHRQLLYF 787
Query: 385 ADSKLDFIDFCNYDGTGRQQVILID----LMVEFTNDLM--GDNGVPALALD 430
AD+ I+ N + I I+ L ++ ++L G NG A +D
Sbjct: 788 ADNVKGHIEKLNLSDPHLLETITIEKPQVLGLKIFDNLTQYGGNGRNACEID 839
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 76/163 (46%), Gaps = 20/163 (12%)
Query: 153 GLAYDWIGGHIYWL--DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
G A DWI +Y+ + +RI V + NG +A D ++ +++ P+ G +++
Sbjct: 1662 GFAVDWISKLLYFSTGNETHSRIMVSNLNGEFVTEIA-DGLSVVNSLVVYPTRGM--MYF 1718
Query: 211 TDWGENPRIERI---GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS---KLDFIDC 264
E P++ + MDGS R I ++ + + L LD T R+Y+ S ++++ D
Sbjct: 1719 ATMSEVPKLYELYASRMDGSERQLISNSTFHPIDSLALDFETNRLYYISSNAGEINYYDI 1778
Query: 265 KSLEI---------KTNVNYSTIFRKLYWIDEGGNGVPLKIGK 298
S +I ++ TI+R + D+ +G ++ K
Sbjct: 1779 GSGKIIQVLAPHEDNHPISTITIYRDSIYYDDNHDGRIMRCNK 1821
>gi|432090393|gb|ELK23819.1| Low-density lipoprotein receptor-related protein 4 [Myotis davidii]
Length = 1909
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 190/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G CS C CTC
Sbjct: 327 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCSQKCQMVRGAVQCTCHT 386
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D CQD+NEC + GYCSQ+CTN++G++ C C GY L D +CKA+
Sbjct: 387 GYRLTEDGHMCQDVNECAEEGYCSQVCTNSEGAFQCWCEAGYELRPDRRSCKALG-PEPV 445
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 446 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRHELVFWSDVTLDRILRANLNGSN 505
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 506 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 565
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A R+Y+ D+K
Sbjct: 566 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGHRMYWVDAKH 623
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 624 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 649
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 650 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 693
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1316 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1375
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1376 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1425
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1426 VIGQGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLVNNSLDEPRAIAVFPR 1485
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1486 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1541
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1542 --------------------------------RIESADLNGKLRQVLVS-HVSHPFALTQ 1568
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1569 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1599
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 48/227 (21%)
Query: 137 DHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D Q++VV + L+ GLA DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR
Sbjct: 807 DGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPR 866
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
++++P G +++WTDWG +P+IER GMD S R IIS+ + WPNGL +D ++R+Y+A
Sbjct: 867 DIVVEPMGG--YMYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWA 924
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ + K++E A +DGS +L+ QL
Sbjct: 925 DAGM-----KTIEF-----------------------------AGLDGSKRKVLIGSQLP 950
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
L L +Y WTDW + G +R T+
Sbjct: 951 HPFGLTLYEERIY-----------WTDWQTKSIQSADRLTGLDRETL 986
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 127/248 (51%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L D C PG S + +
Sbjct: 1010 CAMENGGCSHLCLRSPNPSGFSCTCPTGINLMPDGKICS-------PGMNSFLIFARRID 1062
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S H I A+L+ G H
Sbjct: 1063 IRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHRISRANLD--GSQH- 1119
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1120 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1178
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D A+ ++ +AD+
Sbjct: 1179 YHEMG--YMYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGLTVDKASSQLLWADAHT 1236
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1237 ERIEVADL 1244
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 149/360 (41%), Gaps = 88/360 (24%)
Query: 111 INHSAAFLIISNRHS--ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS 168
++ +++ L+ ++ H+ I VADL + +VS + GL + +IYW D
Sbjct: 1222 VDKASSQLLWADAHTERIEVADLNGANRH-----TLVSPVQHPYGLTL--LDSYIYWTDW 1274
Query: 169 RLNRIEVCDENGTNRIVLAKDNI-----------TQPRGM-------------------- 197
+ I D+ N ++L + N+ QP G
Sbjct: 1275 QTRSIHRADKGTGNNVILVRSNLPGLMDIQAVDRAQPLGFNKCGSRNGGCSHLCLPRPSG 1334
Query: 198 ----------------MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
DPSP T LF I RI +D S+ + + N
Sbjct: 1335 FSCACPTGIQLKGDGKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNN 1390
Query: 242 GLTLDIAT--RRVYFADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWID 286
++LD + +VY+ D LD I + L+ + + R LYW D
Sbjct: 1391 VISLDYDSVDGKVYYTDVFLDVIRRADLNGSNMETVIGQGLKTTDGLAVDWVARNLYWTD 1450
Query: 287 EGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
G N I + +DGS +LV+ L E A+ + +LFWTDWG
Sbjct: 1451 TGRN----TIEASRLDGSCRKVLVNNSLDEPRAI---------AVFPRKGYLFWTDWGHI 1497
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1498 AKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1557
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 135/337 (40%), Gaps = 94/337 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G C+ +C + +Y C+C G+ + +H C FL+ + R I + +
Sbjct: 711 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTED-- 765
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
D V+ D+ +A DW DSR + +
Sbjct: 766 --LSDDVIPLADVRSAVALDW--------DSRDDHV------------------------ 791
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+WTD + I R DG+ + ++ T + P GL +D T
Sbjct: 792 -----------YWTDVSTD-TISRAKWDGTGQEVVVDTSLESPAGLAIDWVTN------- 832
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KLYW D G + +I AN DGS ++L+ L
Sbjct: 833 -----------------------KLYWTDAGTD----RIEVANTDGSMRTVLIWENLDRP 865
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
+ +E Y ++WTDWG +P+IER GMD S R IIS+ + WPNGL +D
Sbjct: 866 RDIVVEPMGGY---------MYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDY 916
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
++R+Y+AD+ + I+F DG+ R+ +I L F
Sbjct: 917 GSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQLPHPF 953
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D RI R +DGS II+T + +GL
Sbjct: 1076 VVVPINITMKNTIAIGVDPQEGKVYWSD-STLHRISRANLDGSQHEDIITTGLQTTDGLA 1134
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1135 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1160
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M Y ++WTDWGEN ++ER GMDGS+R+ +I+
Sbjct: 1161 MRKVLVWQNLDSPRAIVLYHEMGY---------MYWTDWGENAKLERSGMDGSDRTVLIN 1211
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1212 NNLGWPNGLTVDKASSQLLWADAHTERIEVADLNGANRHTLV 1253
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 117/298 (39%), Gaps = 41/298 (13%)
Query: 129 ADLEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
A LE G D + ++++ L GL D + W D+ RIEV D NG NR L
Sbjct: 1194 AKLERSGMDGSDRTVLINNNLGWPNGLTVDKASSQLLWADAHTERIEVADLNGANRHTLV 1253
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P G+ L S +++WTDW + I R N ++ + + P + +
Sbjct: 1254 SP-VQHPYGLTLLDS----YIYWTDW-QTRSIHRADKGTGNNVILVRSNL--PGLMDIQA 1305
Query: 248 ATRRVYFADSKLDFID--CKSLEIKTNVNYSTIFRKLYWIDEGGN--------------- 290
R +K + C L + +S + G
Sbjct: 1306 VDRAQPLGFNKCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSR 1365
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENPR 348
G +I D ++ + V +L ++LD + +G +YY+ +
Sbjct: 1366 GSIRRISLDTSDHTDVHVPVP-ELNNVISLDYDSVDGKVYYTDVFLD------------V 1412
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I R ++GSN T+I + +GL +D R +Y+ D+ + I+ DG+ R+ ++
Sbjct: 1413 IRRADLNGSNMETVIGQGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLV 1470
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Query: 131 LEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + +++S L GLA D+ +YW D+ + IE +G+ R VL
Sbjct: 888 IERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGS 947
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI 232
+ P G+ L ++WTDW + G +R T+
Sbjct: 948 QLPHPFGLTL----YEERIYWTDWQTKSIQSADRLTGLDRETL 986
>gi|328683463|ref|NP_112612.2| low-density lipoprotein receptor-related protein 4 precursor
[Rattus norvegicus]
gi|328671584|dbj|BAD18061.2| LDL receptor-related protein 4 [Rattus norvegicus]
Length = 1905
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 191/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 323 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMIRGAVQCTCHT 382
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 383 GYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALG-PEPV 441
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 442 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 501
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL ++ +PR + L
Sbjct: 502 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIAL 561
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 562 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 619
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 620 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 645
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 646 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 689
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 156/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1312 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1371
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1372 DDHTDVHVPVPGLNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1421
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1422 VIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1481
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+ + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1482 KG--YLFWTDWGHIAKIERANLDGSERKVLINADLGWPNGLTLDYDTRRIYWVDAHLD-- 1537
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1538 --------------------------------RIESADLNGKLRQVLVS-HVSHPFALTQ 1564
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1565 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1595
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 141/326 (43%), Gaps = 91/326 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----------- 126
G C+ +C + +Y C+C G+ + ++H C FL+ + R I
Sbjct: 707 GGCTHLCLPSGQNYTCACPTGF-RKINSHACA--QSLDKFLLFARRMDIRRISFDTEDLS 763
Query: 127 ----------------------------LVADLEEKGK-DHRAQDIVV-SGLDLVEGLAY 156
+ D + K D Q +VV + L+ GLA
Sbjct: 764 DDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQKVVVDTSLESPAGLAI 823
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR ++++P G +++WTDWG +
Sbjct: 824 DWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGG--YMYWTDWGAS 881
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD SNR IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 882 PKIERAGMDASNRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF------- 929
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
A +DGS +L+ QL L L +Y
Sbjct: 930 ----------------------AGLDGSKRKVLIGSQLPHPFGLTLYGQRIY-------- 959
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G +R T+
Sbjct: 960 ---WTDWQTKSIQSADRLTGLDRETL 982
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 129/248 (52%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P+P G CTCP G L D TC PG S + +
Sbjct: 1006 CAVENGGCSHLCLRSPSPSGFSCTCPTGINLLLDGKTCS-------PGMNSFLIFARRID 1058
Query: 90 SYICSCNEGY---VLEYDNHTCK---AIN----HSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K AI + S H I A L+ G H
Sbjct: 1059 VRMVSLDIPYFADVVVPINMTMKNTIAIGVDPLEGKVYWSDSTLHRISRASLD--GSQH- 1115
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1116 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1174
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D + ++ +AD+
Sbjct: 1175 YHEMG--FMYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHT 1232
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1233 ERIEVADL 1240
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 137/333 (41%), Gaps = 98/333 (29%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G CS +C + + + C+C G L D TC +S FLI + R + + L+
Sbjct: 1011 GGCSHLCLRSPSPSGFSCTCPTGINLLLDGKTCSPGMNS--FLIFARRIDVRMVSLDIP- 1067
Query: 136 KDHRAQDIVVSGLDLVEGLA--YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
+ A +V + + +A D + G +YW DS L+
Sbjct: 1068 --YFADVVVPINMTMKNTIAIGVDPLEGKVYWSDSTLH---------------------- 1103
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
RI R +DGS II+T + +GL +D
Sbjct: 1104 ------------------------RISRASLDGSQHEDIITTGLQTTDGLAVD------- 1132
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
I RK+YW D G N +I N+DGS +LV
Sbjct: 1133 -----------------------AIGRKVYWTDTGTN----RIEVGNLDGSMRKVLVWQN 1165
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGL
Sbjct: 1166 LDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGL 1216
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
T+D + ++ +AD+ + I+ + +G R ++
Sbjct: 1217 TVDKTSSQLLWADAHTERIEVADLNGANRHTLV 1249
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D + + + N ++LD + +VY
Sbjct: 1345 GKTCDPSPETYLLF----SSRGSIRRISLDTDDHTDVHVPVPGLNNVISLDYDSVDGKVY 1400
Query: 254 FADSKLDFI---DCKSLEIKTNVNYST----------IFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I D ++T + + + R LYW D G N I +
Sbjct: 1401 YTDVFLDVIRRADLNGSNMETVIGHGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1456
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1457 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1507
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+ + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1508 VLINADLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1553
>gi|383409185|gb|AFH27806.1| low-density lipoprotein receptor-related protein 4 precursor
[Macaca mulatta]
Length = 1905
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 189/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 323 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHT 382
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 383 GYRLTEDGHTCQDVNECADEGYCSQGCTNSEGAFQCWCETGYELRPDRRSCKALG-PEPV 441
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ LE HR
Sbjct: 442 LLFANRIDIRQVLPHRSEYTLLLNTLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 501
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 502 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 561
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 562 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 619
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 620 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 645
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 646 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 689
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1312 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1371
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1372 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1421
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1422 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1481
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1482 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1537
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1538 --------------------------------RIESADLNGKLRQVLVS-HVSHPFALTQ 1564
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1565 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1595
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 128/248 (51%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L D TC PG S + +
Sbjct: 1006 CAMENGGCSHLCLRSPNPSGFSCTCPTGINLLPDGKTCS-------PGMNSFLIFARRID 1058
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S H I A+L+ G H
Sbjct: 1059 IRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHRISRANLD--GSQH- 1115
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1116 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1174
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +IS + WPNGLT+D A+ ++ +AD+
Sbjct: 1175 YHEMG--FMYWTDWGENAKLERSGMDGSDRTVLISNNLGWPNGLTVDKASSQLLWADAHT 1232
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1233 ERIEAADL 1240
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 48/227 (21%)
Query: 137 DHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D Q++VV + L+ GLA DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR
Sbjct: 803 DGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPR 862
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
++++P G +++WTDWG +P+IER GMD S R IIS+ + WPNGL +D ++R+Y+A
Sbjct: 863 DIVVEPMGG--YMYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWA 920
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ + K++E A +DGS +L+ QL
Sbjct: 921 DAGM-----KTIEF-----------------------------AGLDGSKRKVLIGSQLP 946
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
L L +Y WTDW + G +R T+
Sbjct: 947 HPFGLTLYGERIY-----------WTDWQTKSIQSADRLTGLDRETL 982
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 138/344 (40%), Gaps = 94/344 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G C+ +C + +Y C+C G+ + +H C FL+ + R I + +
Sbjct: 707 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTED-- 761
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
D V+ D+ +A DW DSR + +
Sbjct: 762 --LSDDVIPLADVRSAVALDW--------DSRDDHV------------------------ 787
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+WTD + I R DG+ + ++ T + P GL +D T
Sbjct: 788 -----------YWTDVSTDT-ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTN------- 828
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KLYW D G + +I AN DGS ++L+ L
Sbjct: 829 -----------------------KLYWTDAGTD----RIEVANTDGSMRTVLIWENLDRP 861
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
+ +E Y ++WTDWG +P+IER GMD S R IIS+ + WPNGL +D
Sbjct: 862 RDIVVEPMGGY---------MYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDY 912
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++R+Y+AD+ + I+F DG+ R+ +I L F L G+
Sbjct: 913 GSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQLPHPFGLTLYGE 956
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1345 GKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1400
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1401 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1456
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1457 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1507
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1508 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1553
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D RI R +DGS II+T + +GL
Sbjct: 1072 VVVPINITMKNTIAIGVDPQEGKVYWSD-STLHRISRANLDGSQHEDIITTGLQTTDGLA 1130
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1131 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1156
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +IS
Sbjct: 1157 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRTVLIS 1207
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1208 NNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1249
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 139/334 (41%), Gaps = 52/334 (15%)
Query: 131 LEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + +++S L GLA D+ +YW D+ + IE +G+ R VL
Sbjct: 884 IERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGS 943
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
+ P G+ L G R ++WTDW + G +R T+ N + + +
Sbjct: 944 QLPHPFGLTL---YGER-IYWTDWQTKSIQSADRLTGLDRETLQEN---LENLMDIHVFH 996
Query: 250 RRVYFADS--KLDFIDCKSLEIKT--NVNYS-TIFRKLYWIDEGGNGVP----------- 293
RR + ++ C L +++ +S T + + +G P
Sbjct: 997 RRRPPVSTPCAMENGGCSHLCLRSPNPSGFSCTCPTGINLLPDGKTCSPGMNSFLIFARR 1056
Query: 294 LKIGKANMD---GSNASILVSGQLYEALAL--DLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ I ++D ++ + ++ + +A+ D + G +Y+S R
Sbjct: 1057 IDIRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHR------------ 1104
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I R +DGS II+T + +GL +D R+VY+ D+ + I+ N DG+ R+ ++
Sbjct: 1105 ISRANLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQ 1164
Query: 409 DLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+L + A+ L E G +Y++ G
Sbjct: 1165 NL-----------DSPRAIVLYHEMGFMYWTDWG 1187
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 116/298 (38%), Gaps = 41/298 (13%)
Query: 129 ADLEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
A LE G D + +++S L GL D + W D+ RIE D NG NR L
Sbjct: 1190 AKLERSGMDGSDRTVLISNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1249
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P G+ L S +++WTDW + I R D S +I + P + +
Sbjct: 1250 SP-VQHPYGLTLLDS----YIYWTDW-QTRSIHR--ADKGTGSNVILVRSNLPGLMDIQA 1301
Query: 248 ATRRVYFADSKLDFID--CKSLEIKTNVNYSTIFRKLYWIDEGGN--------------- 290
R +K + C L + +S + G
Sbjct: 1302 VDRAQPLGFNKCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSR 1361
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENPR 348
G +I D ++ + V +L ++LD + +G +YY+ +
Sbjct: 1362 GSIRRISLDTSDHTDVHVPVP-ELNNVISLDYDSVDGKVYYTDVFLD------------V 1408
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I R ++GSN T+I + +GL +D R +Y+ D+ + I+ DG+ R+ +I
Sbjct: 1409 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLI 1466
>gi|195112154|ref|XP_002000641.1| GI10346 [Drosophila mojavensis]
gi|193917235|gb|EDW16102.1| GI10346 [Drosophila mojavensis]
Length = 1017
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 173/342 (50%), Gaps = 67/342 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ L+KVCD + DCP+G DE C EC K G C + C +G C C G LS
Sbjct: 437 QCIPLSKVCDKRKDCPDGEDEPAKKCGQNECAVKNGGCMHRCVDHQVGYKCDCHEGYKLS 496
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D +C D+NECEQPG CSQ+C N G + C C GY+ + NHT CKA + A L+++
Sbjct: 497 GDGHSCVDVNECEQPGVCSQICVNEIGGFKCECEAGYMRDPRNHTRCKA-SEGHASLLLA 555
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 556 RRH-----DIRKIALDHMEMTSIVNNTKSATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 610
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + +G VL +D + PR +
Sbjct: 611 NEKTVVLKKSSVTSDGLAVDWIYNHVYYTDTHKCTIELTNFDGNMGKVLIEDALDIPRSI 670
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TII+ + WPNG+TLD+ +R+Y+ D
Sbjct: 671 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIINYDVKWPNGITLDLVRKRIYWVDG 728
Query: 258 KLDFIDCKSLE--IKTNVNYSTIFRK-----------LYWID 286
KL+ I + + + + YST + + +YW D
Sbjct: 729 KLNIISSANYDGSQRRQILYSTEYLRHPFSITTFEDYIYWTD 770
>gi|47116978|sp|Q9QYP1.2|LRP4_RAT RecName: Full=Low-density lipoprotein receptor-related protein 4;
Short=LRP-4; AltName: Full=Multiple epidermal growth
factor-like domains 7; Flags: Precursor
Length = 1905
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 191/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 323 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMIRGAVQCTCHT 382
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 383 GYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALG-PEPV 441
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 442 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 501
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL ++ +PR + L
Sbjct: 502 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIAL 561
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 562 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 619
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 620 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 645
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 646 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 689
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 156/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1312 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1371
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1372 DDHTDVHVPVPGLNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1421
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1422 VIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1481
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+ + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1482 KG--YLFWTDWGHIAKIERANLDGSERKVLINADLGWPNGLTLDYDTRRIYWVDAHLD-- 1537
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1538 --------------------------------RIESADLNGKLRQVLVS-HVSHPFALTQ 1564
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1565 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1595
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 141/326 (43%), Gaps = 91/326 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----------- 126
G C+ +C + +Y C+C G+ + ++H C FL+ + R I
Sbjct: 707 GGCTHLCLPSGQNYTCACPTGF-RKINSHACA--QSLDKFLLFARRMDIRRISFDTEDLS 763
Query: 127 ----------------------------LVADLEEKGK-DHRAQDIVV-SGLDLVEGLAY 156
+ D + K D Q +VV + L+ GLA
Sbjct: 764 DDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQKVVVDTSLESPAGLAI 823
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR ++++P G +++WTDWG +
Sbjct: 824 DWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGG--YMYWTDWGAS 881
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD SNR IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 882 PKIERAGMDASNRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF------- 929
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
A +DGS +L+ QL L L +Y
Sbjct: 930 ----------------------AGLDGSKRKVLIGSQLPHPFGLTLYGQRIY-------- 959
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G +R T+
Sbjct: 960 ---WTDWQTKSIQSADRLTGLDRETL 982
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 129/248 (52%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P+P G CTCP G L D TC PG S + +
Sbjct: 1006 CAVENGGCSHLCLRSPSPSGFSCTCPTGINLLLDGKTCS-------PGMNSFLIFARRID 1058
Query: 90 SYICSCNEGY---VLEYDNHTCK---AIN----HSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K AI + S H I A L+ G H
Sbjct: 1059 VRMVSLDIPYFADVVVPINMTMKNTIAIGVDPLEGKVYWSDSTLHRISRASLD--GSQH- 1115
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1116 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1174
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D + ++ +AD+
Sbjct: 1175 YHEMG--FMYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHT 1232
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1233 ERIEVADL 1240
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 137/333 (41%), Gaps = 98/333 (29%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G CS +C + + + C+C G L D TC +S FLI + R + + L+
Sbjct: 1011 GGCSHLCLRSPSPSGFSCTCPTGINLLLDGKTCSPGMNS--FLIFARRIDVRMVSLDIP- 1067
Query: 136 KDHRAQDIVVSGLDLVEGLA--YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
+ A +V + + +A D + G +YW DS L+
Sbjct: 1068 --YFADVVVPINMTMKNTIAIGVDPLEGKVYWSDSTLH---------------------- 1103
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
RI R +DGS II+T + +GL +D
Sbjct: 1104 ------------------------RISRASLDGSQHEDIITTGLQTTDGLAVD------- 1132
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
I RK+YW D G N +I N+DGS +LV
Sbjct: 1133 -----------------------AIGRKVYWTDTGTN----RIEVGNLDGSMRKVLVWQN 1165
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGL
Sbjct: 1166 LDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGL 1216
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
T+D + ++ +AD+ + I+ + +G R ++
Sbjct: 1217 TVDKTSSQLLWADAHTERIEVADLNGANRHTLV 1249
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D + + + N ++LD + +VY
Sbjct: 1345 GKTCDPSPETYLLF----SSRGSIRRISLDTDDHTDVHVPVPGLNNVISLDYDSVDGKVY 1400
Query: 254 FADSKLDFI---DCKSLEIKTNVNYST----------IFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I D ++T + + + R LYW D G N I +
Sbjct: 1401 YTDVFLDVIRRADLNGSNMETVIGHGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1456
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1457 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1507
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+ + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1508 VLINADLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1553
>gi|242015486|ref|XP_002428384.1| Very low-density lipoprotein receptor precursor, putative
[Pediculus humanus corporis]
gi|212512996|gb|EEB15646.1| Very low-density lipoprotein receptor precursor, putative
[Pediculus humanus corporis]
Length = 835
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 136/434 (31%), Positives = 200/434 (46%), Gaps = 96/434 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGP-GCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++L KVCD K DCP DE C EC G CS C TP C C G L
Sbjct: 251 CISLEKVCDKKLDCPKWEDEPKDSCGKNECLIDNGGCSQLCVDTPGSYYCHCHEGFKLI- 309
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFL---- 118
D+ TC D++ECE PG CSQ+C N G + C C +GY+ + N+T CKA+ A+ L
Sbjct: 310 DNKTCTDIDECEIPGTCSQICINEIGGFKCQCVQGYLRDPRNYTKCKAVEGHASLLFARK 369
Query: 119 ---------------IISNRHS------------ILVADLEEK---------GKDHRAQD 142
I++N S I +D+ E+ G D
Sbjct: 370 HDIRKISLDHHEMTAIVNNTKSATALDFVFRTGMIFWSDVSEQKIYKAPIDEGNDRTV-- 427
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ +GL +GLA DWI HIYW D+ N IE+ G R VL KD++ +PR + ++P
Sbjct: 428 VIKNGLTTADGLAVDWIYNHIYWTDTGKNTIELASYEGNMRKVLIKDDLEEPRAIAVNPL 487
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G W++WTDWG P+IER GMDGS+R I+S ++ WPNGLTLD+ +++Y+AD+K++
Sbjct: 488 EG--WMYWTDWGSEPKIERAGMDGSHRQVIVSYEMKWPNGLTLDLVLKKIYWADAKMN-- 543
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
I N DG+N I++ Q Y L
Sbjct: 544 --------------------------------TISSCNFDGTNRRIILFSQNY----LQH 567
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+ + L ++WTDW + + G + + +T + N + + V
Sbjct: 568 PFSITTFEDL-----VYWTDWDKKAVYKANKFTGKDVVAVTATHML-ENPMVI-----HV 616
Query: 383 YFADSKLDFIDFCN 396
Y + D +++C
Sbjct: 617 YHPYRQPDGLNYCQ 630
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 56/111 (50%), Gaps = 13/111 (11%)
Query: 335 TRWLFWTDWGENPRIERIGMD-GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
T +FW+D E +I + +D G++R+ +I + +GL +D +Y+ D+ + I+
Sbjct: 401 TGMIFWSDVSEQ-KIYKAPIDEGNDRTVVIKNGLTTADGLAVDWIYNHIYWTDTGKNTIE 459
Query: 394 FCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAE 444
+Y+G R+ +I DL A+A++ G +Y++ G+E
Sbjct: 460 LASYEGNMRKVLIKDDL-----------EEPRAIAVNPLEGWMYWTDWGSE 499
>gi|410973797|ref|XP_003993334.1| PREDICTED: low-density lipoprotein receptor-related protein 4
[Felis catus]
Length = 2012
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 190/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DEGP + C G C+ C CTC
Sbjct: 430 RCIGQRKLCNGVNDCGDNSDEGPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHT 489
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D CQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 490 GYRLTEDGHMCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALG-PEPV 548
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 549 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 608
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 609 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 668
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A R+Y+ D+K
Sbjct: 669 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGHRMYWVDAKH 726
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 727 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 752
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 753 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 796
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1419 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1478
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1479 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1528
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1529 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1588
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1589 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1644
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I ++++G +LVS + AL
Sbjct: 1645 --------------------------------RIESSDLNGKLRQVLVS-HVSHPFALTQ 1671
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G ++ T+++
Sbjct: 1672 QD-----------RWIYWTDW-QTKSIQRVDKYSGRSKETVLA 1702
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/248 (37%), Positives = 129/248 (52%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C + G CS+ C P P G CTCP G L D TC PG S + +
Sbjct: 1113 CAMENGGCSHLCLRSPNPSGFSCTCPTGINLMPDGKTCS-------PGMNSFLIFARRVD 1165
Query: 91 Y-ICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S HSI ADLE G H
Sbjct: 1166 IRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHSISRADLE--GSQH- 1222
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1223 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1281
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +IS + WPNGLT+D A+ ++ +AD+
Sbjct: 1282 YHEMG--FMYWTDWGENAKLERSGMDGSDRTVLISNNLGWPNGLTVDKASSQLLWADAHT 1339
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1340 ERIEAADL 1347
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 140/326 (42%), Gaps = 91/326 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----------- 126
G C+ +C + +Y C+C G+ + +H C FL+ + R I
Sbjct: 814 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTEDLS 870
Query: 127 ----------------------------LVADLEEKGK-DHRAQDIVV-SGLDLVEGLAY 156
+ D + K D Q++VV + L+ GLA
Sbjct: 871 DDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAI 930
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR ++++P G +++WTDWG +
Sbjct: 931 DWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGG--YMYWTDWGAS 988
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD S R IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 989 PKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF------- 1036
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
A +DGS +L+ QL L L +Y
Sbjct: 1037 ----------------------AGLDGSKRKVLIGSQLPHPFGLTLYGERIY-------- 1066
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G +R T+
Sbjct: 1067 ---WTDWQTKSIQSADRLTGLDRETL 1089
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 149/358 (41%), Gaps = 84/358 (23%)
Query: 111 INHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL 170
++ +++ L+ ++ H+ + + G ++ +VS + GL +G +IYW D +
Sbjct: 1325 VDKASSQLLWADAHTERIEAADLNGA---SRHTLVSPVQHPYGLTL--LGSYIYWTDWQT 1379
Query: 171 NRIEVCDENGTNRIVLAKDNI-----------TQPRGM---------------------- 197
I D+ + ++L + N+ QP G
Sbjct: 1380 RSIHRADKGTGSNVILVRSNLPGLMDIQAVDRAQPLGFNKCGSRNGGCSHLCLPRPSGFS 1439
Query: 198 --------------MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
DPSP T LF I RI +D S+ + + N +
Sbjct: 1440 CACPTGIQLKGDGKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVI 1495
Query: 244 TLDIAT--RRVYFADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEG 288
+LD + +VY+ D LD I + L+ + + R LYW D G
Sbjct: 1496 SLDYDSVDGKVYYTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTG 1555
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
N I + +DGS +L++ L E A+ + +LFWTDWG +
Sbjct: 1556 RN----TIEASRLDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAK 1602
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1603 IERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESSDLNGKLRQVLV 1660
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 91/171 (53%), Gaps = 15/171 (8%)
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
K+YW + I+ R S+ + I L+ + I RK+YW D G N +
Sbjct: 1201 KVYWSDSTLHSIS--RADLEGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTN----R 1254
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
I N+DGS +LV L A+ L + M + ++WTDWGEN ++ER GMD
Sbjct: 1255 IEVGNLDGSMRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMD 1305
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
GS+R+ +IS + WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1306 GSDRTVLISNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGASRHTLV 1356
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 116/298 (38%), Gaps = 41/298 (13%)
Query: 129 ADLEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
A LE G D + +++S L GL D + W D+ RIE D NG +R L
Sbjct: 1297 AKLERSGMDGSDRTVLISNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGASRHTLV 1356
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P G+ L S +++WTDW + I R D S +I + P + +
Sbjct: 1357 SP-VQHPYGLTLLGS----YIYWTDW-QTRSIHR--ADKGTGSNVILVRSNLPGLMDIQA 1408
Query: 248 ATRRVYFADSKLDFID--CKSLEIKTNVNYSTIFRKLYWIDEGGN--------------- 290
R +K + C L + +S + G
Sbjct: 1409 VDRAQPLGFNKCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSR 1468
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENPR 348
G +I D ++ + V +L ++LD + +G +YY+ +
Sbjct: 1469 GSIRRISLDTSDHTDVHVPVP-ELNNVISLDYDSVDGKVYYTDVFLD------------V 1515
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I R ++GSN T+I + +GL +D R +Y+ D+ + I+ DG+ R+ +I
Sbjct: 1516 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLI 1573
>gi|390179017|ref|XP_003736782.1| GA16002, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859679|gb|EIM52855.1| GA16002, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 1073
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 172/342 (50%), Gaps = 67/342 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ L KVC+ + DCP+G DE G C + EC K G C + C +G C C G LS
Sbjct: 509 QCIALDKVCNKRKDCPDGEDEPAGKCGVNECASKNGGCMHQCIDQVVGYKCECRKGYKLS 568
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D TC D++ECE PG CSQ+C N G + C C GY+ + NHT CKA A L+++
Sbjct: 569 GDKRTCVDIDECENPGTCSQLCINEIGGFKCECEAGYMRDPRNHTRCKA-GEGHASLLLA 627
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 628 RRH-----DIRKIALDHMEMTSIVNSTKSATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 682
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + +G VL +D + PR +
Sbjct: 683 NEKTVVLKQSSVTSDGLAVDWIYNHVYYTDTHKCTIELTNFDGNMGKVLIEDALDIPRSI 742
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TIIS + WPNG+TLD+ +R+Y+ D
Sbjct: 743 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVRKRIYWVDG 800
Query: 258 KLDFIDCKSLE--IKTNVNYSTIFRK-----------LYWID 286
KL+ I + + + + YST + + +YW D
Sbjct: 801 KLNVISSANYDGSQRRQILYSTEYLRHPFSITTFEDYIYWTD 842
>gi|390179023|ref|XP_001359537.3| GA16002, isoform E [Drosophila pseudoobscura pseudoobscura]
gi|388859682|gb|EAL28683.3| GA16002, isoform E [Drosophila pseudoobscura pseudoobscura]
Length = 1039
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 172/342 (50%), Gaps = 67/342 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ L KVC+ + DCP+G DE G C + EC K G C + C +G C C G LS
Sbjct: 509 QCIALDKVCNKRKDCPDGEDEPAGKCGVNECASKNGGCMHQCIDQVVGYKCECRKGYKLS 568
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D TC D++ECE PG CSQ+C N G + C C GY+ + NHT CKA A L+++
Sbjct: 569 GDKRTCVDIDECENPGTCSQLCINEIGGFKCECEAGYMRDPRNHTRCKA-GEGHASLLLA 627
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 628 RRH-----DIRKIALDHMEMTSIVNSTKSATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 682
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + +G VL +D + PR +
Sbjct: 683 NEKTVVLKQSSVTSDGLAVDWIYNHVYYTDTHKCTIELTNFDGNMGKVLIEDALDIPRSI 742
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TIIS + WPNG+TLD+ +R+Y+ D
Sbjct: 743 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVRKRIYWVDG 800
Query: 258 KLDFIDCKSLE--IKTNVNYSTIFRK-----------LYWID 286
KL+ I + + + + YST + + +YW D
Sbjct: 801 KLNVISSANYDGSQRRQILYSTEYLRHPFSITTFEDYIYWTD 842
>gi|194217880|ref|XP_001490948.2| PREDICTED: low-density lipoprotein receptor-related protein 4
[Equus caballus]
Length = 1995
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 190/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 413 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEESCNVNNGGCAQKCQMVRGTVQCTCHT 472
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D CQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 473 GYRLTEDGHMCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALG-PEPV 531
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 532 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 591
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 592 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 651
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 652 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 709
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 710 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 735
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 736 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 779
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1402 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1461
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1462 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1511
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1512 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1571
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1572 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1627
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1628 --------------------------------RIESADLNGKLRQVLVS-HVSHPFALTQ 1654
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1655 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1685
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 126/248 (50%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L D TC PG S + +
Sbjct: 1096 CAVENGGCSHLCLRSPNPSGFSCTCPTGINLMPDGKTCS-------PGMNSFLIFARRID 1148
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S H I A+L+ G H
Sbjct: 1149 VRLVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHRISRANLD--GSQH- 1205
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1206 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1264
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS R+ +IS + WPNGLT+D A ++ +AD+
Sbjct: 1265 YHEMG--FMYWTDWGENAKLERSGMDGSERTVLISNNLGWPNGLTVDKAGSQLLWADAHT 1322
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1323 ERIEAADL 1330
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 141/326 (43%), Gaps = 91/326 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----------- 126
G C+ +C + +Y C+C G+ + +H C FL+ + R I
Sbjct: 797 GGCTHLCLPSGHNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTEDLS 853
Query: 127 ----------------------------LVADLEEKGK-DHRAQDIVV-SGLDLVEGLAY 156
+ D + K D Q++VV + L+ GLA
Sbjct: 854 DDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAI 913
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR ++++P G +++WTDWG +
Sbjct: 914 DWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGG--YMYWTDWGAS 971
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD S+R IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 972 PKIERAGMDASSRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF------- 1019
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
A +DGS +L+ QL L L +Y
Sbjct: 1020 ----------------------AGLDGSKRKVLIGSQLPHPFGLTLYGERIY-------- 1049
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G +R T+
Sbjct: 1050 ---WTDWQTKSIQSADRLTGLDRETL 1072
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1435 GKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1490
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1491 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1546
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1547 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1597
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1598 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1643
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D + RI R +DGS II+T + +GL
Sbjct: 1162 VVVPINITMKNTIAIGVDPQEGKVYWSDSTLH-RISRANLDGSQHEDIITTGLQTTDGLA 1220
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1221 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1246
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGEN ++ER GMDGS R+ +IS
Sbjct: 1247 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSERTVLIS 1297
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D A ++ +AD+ + I+ + +G R ++
Sbjct: 1298 NNLGWPNGLTVDKAGSQLLWADAHTERIEAADLNGANRHTLV 1339
>gi|195112156|ref|XP_002000642.1| GI10347 [Drosophila mojavensis]
gi|193917236|gb|EDW16103.1| GI10347 [Drosophila mojavensis]
Length = 1070
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 116/337 (34%), Positives = 173/337 (51%), Gaps = 57/337 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ L++VCD + DCP+G DE C + EC+ + G C + C P+G C C G L+
Sbjct: 531 QCIALSQVCDRRKDCPDGEDEPANKCGINECEVRNGGCMHRCVDQPVGYRCECHAGYKLT 590
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
+D C D+NECE+PG CSQ+C N G + C C GY+ + N T CKA A+ L+++
Sbjct: 591 SDGHHCMDINECEEPGVCSQICVNEVGGFKCECEAGYMRDSHNRTRCKATEGHAS-LLLA 649
Query: 122 NRHSILVADLEEKG-------------------------KDHRAQDIVVSGLD------- 149
RH I L+ D Q I + +D
Sbjct: 650 RRHDIRKIALDHMEITSIVNNTKAATALDFVFRTGMIFWSDVNTQSIYKAPIDEGNEKTV 709
Query: 150 -------LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+GLA DWI H+Y+ D+ IE+ + +G VL +D + PR + LDP
Sbjct: 710 VLKKSSVTSDGLAVDWIYNHVYYTDTHKCTIELTNFDGNMGKVLIEDALDIPRSIALDPI 769
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G W++W+DWG +PRIER GMDGS+R+TII+ + WPNG+TLD+ +R+Y+ D KL+ I
Sbjct: 770 EG--WMYWSDWGASPRIERAGMDGSHRTTIINYDVKWPNGITLDLVRKRIYWVDGKLNII 827
Query: 263 DCKSLE--IKTNVNYSTIFRK-----------LYWID 286
+ + + + YST + + +YW D
Sbjct: 828 SSANYDGSQRRQILYSTEYLRHPFSITTFEDYIYWTD 864
>gi|47213812|emb|CAF92585.1| unnamed protein product [Tetraodon nigroviridis]
Length = 825
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 185/388 (47%), Gaps = 72/388 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+++ KVC+ + DC + +DE CD+ EC+ G CS+ C +G C+CP G L
Sbjct: 272 ECISMEKVCNKQADCRDSSDEPARECDIDECQVDNGGCSHNCSDLKVGFNCSCPTGYSLK 331
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC+D++EC +P CSQ+C N GSY C C EGY ++ TCKA L +N
Sbjct: 332 MDKKTCEDIDECAEPDTCSQICINLAGSYKCDCLEGYQIDPLTKTCKAQAGVVPMLYFTN 391
Query: 123 RH------------------------------------------SILVADLEEKGKDHRA 140
+H I + ++ G
Sbjct: 392 KHEVRRMTLDRSEYVRLIPQLKNVVALDIDMPNGRIFWSDLFLKKIFSSRIDVAGNSSHH 451
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++ SG++ EG+A DWI G+IYW DS L + V +G+ R L +N+ +PR +++D
Sbjct: 452 IAVIESGIEAPEGIAVDWIHGNIYWTDSALKTVSVAATDGSRRKTLITENLEKPRAIVVD 511
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P +++WTDWGE +IE+ G++G +R +++ I WPNG+TLD+ R+Y+ DSKL
Sbjct: 512 PV--NNFMYWTDWGEQAKIEKCGLNGVDRFALVTDNIVWPNGITLDVTNNRLYWVDSKLH 569
Query: 261 FIDCKSLEIKTNVNYSTIF---------------RKLYWIDEGGNGVPLKIGKANMDGSN 305
+ S+++ +S +F +++W D + V + + G++
Sbjct: 570 TL--SSIDVNGGTRHSILFSEEHLSHPISLTVFENQVFWTDMDHSAV---MSANRLTGND 624
Query: 306 ASILVSGQLYEALALDLENGMLYYSTLK 333
IL A LD ++ Y LK
Sbjct: 625 IKIL-------ATDLDQPEDIILYHDLK 645
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 171/424 (40%), Gaps = 90/424 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS-- 62
C+ CDG DC + +DE +C HK C PT + C GE +S
Sbjct: 232 CIAGALQCDGMRDCTDHSDE------LDC-HKVKACEG---PT----MFKCRTGECISME 277
Query: 63 ---NDSVTCQD----------MNECE-QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTC 108
N C+D ++EC+ G CS C++ K + CSC GY L+ D TC
Sbjct: 278 KVCNKQADCRDSSDEPARECDIDECQVDNGGCSHNCSDLKVGFNCSCPTGYSLKMDKKTC 337
Query: 109 KAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS 168
+ I+ A + S + +L K D +EG D +
Sbjct: 338 EDIDECAE----PDTCSQICINLAGSYK-----------CDCLEGYQIDPL--------- 373
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI-GMDGS 227
+ C +L N + R M LD S R + P+++ + +D
Sbjct: 374 ----TKTCKAQAGVVPMLYFTNKHEVRRMTLDRSEYVRLI--------PQLKNVVALD-- 419
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC--KSLEIKTNVNYSTIFRKLYWI 285
+ + +I+W + I + R+ A + I +E + I +YW
Sbjct: 420 --IDMPNGRIFWSDLFLKKIFSSRIDVAGNSSHHIAVIESGIEAPEGIAVDWIHGNIYWT 477
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDW 343
D V + A DGS L++ L + A+ +D N +Y WTDW
Sbjct: 478 DSALKTVSV----AATDGSRRKTLITENLEKPRAIVVDPVNNFMY-----------WTDW 522
Query: 344 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403
GE +IE+ G++G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R
Sbjct: 523 GEQAKIEKCGLNGVDRFALVTDNIVWPNGITLDVTNNRLYWVDSKLHTLSSIDVNGGTRH 582
Query: 404 QVIL 407
++
Sbjct: 583 SILF 586
>gi|149022634|gb|EDL79528.1| low density lipoprotein receptor-related protein 4, isoform CRA_b
[Rattus norvegicus]
Length = 1414
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 191/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 323 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMIRGAVQCTCHT 382
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 383 GYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALG-PEPV 441
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 442 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 501
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL ++ +PR + L
Sbjct: 502 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIAL 561
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 562 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 619
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 620 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 645
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 646 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 689
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 141/326 (43%), Gaps = 91/326 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----------- 126
G C+ +C + +Y C+C G+ + ++H C FL+ + R I
Sbjct: 707 GGCTHLCLPSGQNYTCACPTGF-RKINSHACA--QSLDKFLLFARRMDIRRISFDTEDLS 763
Query: 127 ----------------------------LVADLEEKGK-DHRAQDIVV-SGLDLVEGLAY 156
+ D + K D Q +VV + L+ GLA
Sbjct: 764 DDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQKVVVDTSLESPAGLAI 823
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR ++++P G +++WTDWG +
Sbjct: 824 DWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGG--YMYWTDWGAS 881
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD SNR IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 882 PKIERAGMDASNRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF------- 929
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
A +DGS +L+ QL L L +Y
Sbjct: 930 ----------------------AGLDGSKRKVLIGSQLPHPFGLTLYGQRIY-------- 959
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G +R T+
Sbjct: 960 ---WTDWQTKSIQSADRLTGLDRETL 982
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 129/248 (52%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P+P G CTCP G L D TC PG S + +
Sbjct: 1006 CAVENGGCSHLCLRSPSPSGFSCTCPTGINLLLDGKTCS-------PGMNSFLIFARRID 1058
Query: 90 SYICSCNEGY---VLEYDNHTCK---AIN----HSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K AI + S H I A L+ G H
Sbjct: 1059 VRMVSLDIPYFADVVVPINMTMKNTIAIGVDPLEGKVYWSDSTLHRISRASLD--GSQH- 1115
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1116 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1174
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D + ++ +AD+
Sbjct: 1175 YHEMG--FMYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHT 1232
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1233 ERIEVADL 1240
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 137/333 (41%), Gaps = 98/333 (29%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G CS +C + + + C+C G L D TC +S FLI + R + + L+
Sbjct: 1011 GGCSHLCLRSPSPSGFSCTCPTGINLLLDGKTCSPGMNS--FLIFARRIDVRMVSLDIP- 1067
Query: 136 KDHRAQDIVVSGLDLVEGLA--YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
+ A +V + + +A D + G +YW DS L+
Sbjct: 1068 --YFADVVVPINMTMKNTIAIGVDPLEGKVYWSDSTLH---------------------- 1103
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
RI R +DGS II+T + +GL +D
Sbjct: 1104 ------------------------RISRASLDGSQHEDIITTGLQTTDGLAVD------- 1132
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
I RK+YW D G N +I N+DGS +LV
Sbjct: 1133 -----------------------AIGRKVYWTDTGTN----RIEVGNLDGSMRKVLVWQN 1165
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGL
Sbjct: 1166 LDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGL 1216
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
T+D + ++ +AD+ + I+ + +G R ++
Sbjct: 1217 TVDKTSSQLLWADAHTERIEVADLNGANRHTLV 1249
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 54/123 (43%), Gaps = 9/123 (7%)
Query: 129 ADLEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
A LE G D + ++++ L GL D + W D+ RIEV D NG NR L
Sbjct: 1190 AKLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHTERIEVADLNGANRHTLV 1249
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P G+ L S +++WTDW + I R D S S +I + P + +
Sbjct: 1250 SP-VQHPYGLTLLDS----YIYWTDW-QTRSIHR--ADKSTGSNVILVRSNLPGLMDIQA 1301
Query: 248 ATR 250
R
Sbjct: 1302 VDR 1304
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 71 MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
N+C + G CS +C + C+C G L+ D TC +L+ S+R SI
Sbjct: 1310 FNKCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDP--SPETYLLFSSRGSIRRI 1367
Query: 130 DLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
L+ DH + V GL+ V L YD + G +Y+ D L+ I
Sbjct: 1368 SLDT--DDHTDVHVPVPGLNNVISLDYDSVDGKVYYTDVFLDVIR 1410
>gi|390179019|ref|XP_003736783.1| GA16002, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388859680|gb|EIM52856.1| GA16002, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 883
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 172/342 (50%), Gaps = 67/342 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ L KVC+ + DCP+G DE G C + EC K G C + C +G C C G LS
Sbjct: 319 QCIALDKVCNKRKDCPDGEDEPAGKCGVNECASKNGGCMHQCIDQVVGYKCECRKGYKLS 378
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D TC D++ECE PG CSQ+C N G + C C GY+ + NHT CKA A L+++
Sbjct: 379 GDKRTCVDIDECENPGTCSQLCINEIGGFKCECEAGYMRDPRNHTRCKA-GEGHASLLLA 437
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 438 RRH-----DIRKIALDHMEMTSIVNSTKSATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 492
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + +G VL +D + PR +
Sbjct: 493 NEKTVVLKQSSVTSDGLAVDWIYNHVYYTDTHKCTIELTNFDGNMGKVLIEDALDIPRSI 552
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TIIS + WPNG+TLD+ +R+Y+ D
Sbjct: 553 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVRKRIYWVDG 610
Query: 258 KLDFIDCKSLE--IKTNVNYSTIFRK-----------LYWID 286
KL+ I + + + + YST + + +YW D
Sbjct: 611 KLNVISSANYDGSQRRQILYSTEYLRHPFSITTFEDYIYWTD 652
>gi|328720450|ref|XP_001946703.2| PREDICTED: very low-density lipoprotein receptor-like
[Acyrthosiphon pisum]
Length = 907
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 135/432 (31%), Positives = 202/432 (46%), Gaps = 94/432 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE-GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EILS 62
C+ + KVCD DCP DE C++ EC G C+ C P C C PG +++S
Sbjct: 355 CIPMEKVCDKNMDCPGFEDEEQESCNVNECLINNGGCTQICVDLPHTFRCACKPGYKLIS 414
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLI-- 119
N+ TC D+NECE G CSQ+C N KG+Y C C GY+ + +HT CKA+ A+ L
Sbjct: 415 NN--TCDDVNECEIEGSCSQICINEKGTYKCECEPGYLRDPQDHTRCKAMEGHASLLFSM 472
Query: 120 ------ISNRHSILVA-----------------------DLEEKG------KDHRAQDIV 144
IS H + A D+ EK + R + IV
Sbjct: 473 QHNIRKISLDHHEMSAIINSTKSATAIDFVFRTGMIYWGDVSEKKIYKAPIDEGRQRTIV 532
Query: 145 V-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
V SGL +GLA DWI GHIYW ++ + IE+ + G + L K + +PR + +DP
Sbjct: 533 VESGLSSADGLAVDWIYGHIYWTNADKDSIELANFEGNMQKTLFKSELKEPRSIAVDPLN 592
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G WL+W+DWG N +IER GMDG++R I S + WPNG+TLD+ ++R+Y+ D+KL
Sbjct: 593 G--WLYWSDWGSNAKIERAGMDGTHREVIASFDVKWPNGITLDLVSKRLYWVDAKLH--- 647
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
I N DGS +++ ++ +
Sbjct: 648 -------------------------------TISSCNFDGSQRRLVLFSPVWLPHPFSI- 675
Query: 324 NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 383
ST + + L+W+DW + I+ +GSN +T+ + +T + VY
Sbjct: 676 ------STFEDS--LYWSDWNQKAIIKANKFNGSNITTVTALH------MTQNPMVVHVY 721
Query: 384 FADSKLDFIDFC 395
+ D +++C
Sbjct: 722 HPYRQPDGVNYC 733
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 109/454 (24%), Positives = 183/454 (40%), Gaps = 106/454 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKH-KFGLCSNTCHPTPLGALCT------- 54
CV + VCDG DC +G+DE P C C+ +F NTC P L T
Sbjct: 267 HCVIQSWVCDGSVDCADGSDEAPHRCHNTTCRSDQFRCRDNTCIPGFLHCSGTPDCADGS 326
Query: 55 ----------------------------CPPGEILSNDSVTCQDMNECEQP--------- 77
C P E + + ++ C + EQ
Sbjct: 327 DEENCKEPVHKCDPYTEFDCGTDEAGGICIPMEKVCDKNMDCPGFEDEEQESCNVNECLI 386
Query: 78 --GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G C+Q+C + ++ C+C GY L N+TC +N I S + + +
Sbjct: 387 NNGGCTQICVDLPHTFRCACKPGYKL-ISNNTCDDVNECE----IEGSCSQICINEKGTY 441
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
K + D A + ++ + + +I + D + + I+ + + T
Sbjct: 442 KCECEPGYLRDPQDHTRCKAMEGHASLLFSMQHNIRKISL-DHHEMSAIINSTKSAT--- 497
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+D T ++W D E + +G R+ ++ + + +GL +D
Sbjct: 498 --AIDFVFRTGMIYWGDVSEKKIYKAPIDEGRQRTIVVESGLSSADGLAVDW-------- 547
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
I+ +YW + + + L AN +G+ L +L
Sbjct: 548 ----------------------IYGHIYWTNADKDSIEL----ANFEGNMQKTLFKSELK 581
Query: 316 E--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
E ++A+D NG WL+W+DWG N +IER GMDG++R I S + WPNG+
Sbjct: 582 EPRSIAVDPLNG-----------WLYWSDWGSNAKIERAGMDGTHREVIASFDVKWPNGI 630
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
TLD+ ++R+Y+ D+KL I CN+DG+ R+ V+
Sbjct: 631 TLDLVSKRLYWVDAKLHTISSCNFDGSQRRLVLF 664
>gi|126332714|ref|XP_001369900.1| PREDICTED: low-density lipoprotein receptor-related protein 4
[Monodelphis domestica]
Length = 1947
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 189/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 362 RCIGQRKLCNGVNDCGDSSDESPQQNCRPRTGQENCNVNNGGCAQKCQMVRGAVQCTCHT 421
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L D +CQD+NECE+ GYCSQ CTN+ G++ C C GY L D +CKA+
Sbjct: 422 GYRLMEDGRSCQDVNECEEEGYCSQGCTNSDGAFQCWCEAGYELRPDRRSCKALG-PEPV 480
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 481 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 540
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 541 VEEVVSTGLESPGGLAVDWLHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 600
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A R+Y+ D+K
Sbjct: 601 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGHRMYWVDAKH 658
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +A++DGSN ++S L A
Sbjct: 659 HVIE----------------------------------RADLDGSNRKAVISQGLPHPFA 684
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 685 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 728
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 156/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C K G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1351 KCGPKNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1410
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1411 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1460
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + P
Sbjct: 1461 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAAFPR 1520
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1521 KG--YLFWTDWGHLAKIERSNLDGSERKLLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1576
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1577 --------------------------------RIESADLNGKLRQVLVS-HVSHPFALTQ 1603
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1604 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1634
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 141/326 (43%), Gaps = 91/326 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----------- 126
G C+ +C + +Y C+C G+ + +H+C FL+ + R I
Sbjct: 746 GGCTHLCLPSGQNYTCACPTGF-RKTSSHSCA--QSLDKFLLFARRMDIRRISFDTEDLS 802
Query: 127 ----------------------------LVADLEEKGK-DHRAQDIVV-SGLDLVEGLAY 156
+ D + K D Q++VV + L+ GLA
Sbjct: 803 DDVIPLADVRSAVALDWDSRDDYVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAI 862
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +GT R VL +N+ +PR ++++P G +++WTDWG +
Sbjct: 863 DWVTNKLYWTDAGTDRIEVANTDGTMRTVLIWENLDRPRDIVVEPRGG--FMYWTDWGAS 920
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD S R IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 921 PKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF------- 968
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
A +DGS +L+ QL L L +Y
Sbjct: 969 ----------------------AGLDGSKRKVLIGTQLPHPFGLTLYGERIY-------- 998
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G +R T+
Sbjct: 999 ---WTDWQTKSIQSADRLTGLDRETL 1021
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 133/289 (46%), Gaps = 67/289 (23%)
Query: 78 GYCSQMCTNTK--GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE--- 132
G CS +C + Y C+C G L D TC + S FLI + R I + L+
Sbjct: 1050 GGCSHLCLRSPHPKGYSCTCPTGINLLADGKTCSSGMRS--FLIFARRIDIRMVSLDIPY 1107
Query: 133 ----------------------EKGKDH-----------------RAQDIVVSGLDLVEG 153
++GK + +DI+ +GL +G
Sbjct: 1108 FADVVVPVNITMKNTIAIGVDPQEGKVYWSDSTLRKISRANLDGSHHEDIITTGLQTTDG 1167
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
LA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L G+ ++WTDW
Sbjct: 1168 LAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVLYHEMGS--MYWTDW 1225
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE----- 268
GEN ++ER GMDGS+R+ +I+ + WPNGLT+D A ++ +AD+ + I+ L
Sbjct: 1226 GENAKLERAGMDGSDRAVLINNNLGWPNGLTVDKAGSQLLWADAHTERIEAADLNGANRR 1285
Query: 269 -----IKTNVNYSTIFRKLYWID---------EGGNGVPLKIGKANMDG 303
++ + + +YW D + G G + + +AN+ G
Sbjct: 1286 TLVSPVQHPYGLTLLDSYIYWTDWQTRSIHRADKGTGSNVILVRANLPG 1334
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1384 GKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1439
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1440 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1495
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1496 LDGSCRKVLINNSLDEPRAI---------AAFPRKGYLFWTDWGHLAKIERSNLDGSERK 1546
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1547 LLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1592
>gi|390179021|ref|XP_003736784.1| GA16002, isoform D [Drosophila pseudoobscura pseudoobscura]
gi|388859681|gb|EIM52857.1| GA16002, isoform D [Drosophila pseudoobscura pseudoobscura]
Length = 849
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 172/342 (50%), Gaps = 67/342 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ L KVC+ + DCP+G DE G C + EC K G C + C +G C C G LS
Sbjct: 319 QCIALDKVCNKRKDCPDGEDEPAGKCGVNECASKNGGCMHQCIDQVVGYKCECRKGYKLS 378
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D TC D++ECE PG CSQ+C N G + C C GY+ + NHT CKA A L+++
Sbjct: 379 GDKRTCVDIDECENPGTCSQLCINEIGGFKCECEAGYMRDPRNHTRCKA-GEGHASLLLA 437
Query: 122 NRHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------ 151
RH D+ + DH +V + LD V
Sbjct: 438 RRH-----DIRKIALDHMEMTSIVNSTKSATALDFVFRTGMIFWSDVTTQSIYKAPIDEG 492
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+GLA DWI H+Y+ D+ IE+ + +G VL +D + PR +
Sbjct: 493 NEKTVVLKQSSVTSDGLAVDWIYNHVYYTDTHKCTIELTNFDGNMGKVLIEDALDIPRSI 552
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G W++W+DWG +PRIER GMDGS+R+TIIS + WPNG+TLD+ +R+Y+ D
Sbjct: 553 ALDPIEG--WMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVRKRIYWVDG 610
Query: 258 KLDFIDCKSLE--IKTNVNYSTIFRK-----------LYWID 286
KL+ I + + + + YST + + +YW D
Sbjct: 611 KLNVISSANYDGSQRRQILYSTEYLRHPFSITTFEDYIYWTD 652
>gi|348520917|ref|XP_003447973.1| PREDICTED: low-density lipoprotein receptor 1-like [Oreochromis
niloticus]
Length = 780
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 166/321 (51%), Gaps = 47/321 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+++ KVC+ + DC +G+DE CD EC G CS+ C+ +G C+CP G L
Sbjct: 314 ECIDMEKVCNKQNDCKDGSDEPAKECDNNECLTGNGGCSHHCNDLKIGYNCSCPAGYRLK 373
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
++ TC+D++EC +P C+Q+C N GSY C C EGY+++ TCKA + + L +N
Sbjct: 374 ANNKTCEDIDECAEPDTCTQICINLPGSYKCDCGEGYMIDPATKTCKAESGTVPTLYFTN 433
Query: 123 RHSI--LVADLEE----------------------------------------KGKDHRA 140
RH + L D E G
Sbjct: 434 RHEVRKLTVDRSEYVRVIPQLKNPMALDMDMPNKMIFWSDLSLKKIYSSMIDVAGNSSHH 493
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+V SG++ EG+A DWI G+IYW D L I V +G+ R L ++ +PR + +D
Sbjct: 494 SVVVDSGIEAPEGIAVDWIHGNIYWTDRVLKTISVATTDGSKRKTLIATDLDKPRAITVD 553
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P ++WTDWGE +IE+ G++G++R+T++ I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 554 PV--NNLMYWTDWGEEAKIEKSGLNGADRTTLVKDNIVWPNGITLDMVNQRLYWVDSKLH 611
Query: 261 FIDCKSLEIKTNVNYSTIFRK 281
+ S+++ +S I +
Sbjct: 612 SL--SSIDVNGGARHSLIINE 630
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 115/240 (47%), Gaps = 46/240 (19%)
Query: 195 RGMMLDPSPGT--------RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 246
G M+DP+ T L++T+ E + ++ +D S +I ++ P L +D
Sbjct: 408 EGYMIDPATKTCKAESGTVPTLYFTNRHE---VRKLTVDRSEYVRVIP-QLKNPMALDMD 463
Query: 247 IATRRVYFADSKLDFIDCKSLEIKTNVNYST-----------------IFRKLYWIDEGG 289
+ + ++++D L I +++ N ++ + I +YW D
Sbjct: 464 MPNKMIFWSDLSLKKIYSSMIDVAGNSSHHSVVVDSGIEAPEGIAVDWIHGNIYWTDR-- 521
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
V I A DGS L++ L + A+ +D N ++Y WTDWGE
Sbjct: 522 --VLKTISVATTDGSKRKTLIATDLDKPRAITVDPVNNLMY-----------WTDWGEEA 568
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+IE+ G++G++R+T++ I WPNG+TLD+ +R+Y+ DSKL + + +G R +I+
Sbjct: 569 KIEKSGLNGADRTTLVKDNIVWPNGITLDMVNQRLYWVDSKLHSLSSIDVNGGARHSLII 628
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 61/139 (43%), Gaps = 21/139 (15%)
Query: 308 ILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
+ V QL +ALD++ N M+++S L + + + + S+ S ++ +
Sbjct: 448 VRVIPQLKNPMALDMDMPNKMIFWSDLSLKKIYS--------SMIDVAGNSSHHSVVVDS 499
Query: 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVP 425
I P G+ +D +Y+ D L I DG+ R+ +I DL +
Sbjct: 500 GIEAPEGIAVDWIHGNIYWTDRVLKTISVATTDGSKRKTLIATDL-----------DKPR 548
Query: 426 ALALDLENGMLYYSTEGAE 444
A+ +D N ++Y++ G E
Sbjct: 549 AITVDPVNNLMYWTDWGEE 567
>gi|431915751|gb|ELK16084.1| Low-density lipoprotein receptor-related protein 4 [Pteropus
alecto]
Length = 1929
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/420 (31%), Positives = 189/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 346 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNANNGGCAQKCQMVRGAVQCTCHT 405
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D CQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 406 GYRLTEDGRMCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALG-PEPV 464
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 465 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 524
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 525 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 584
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A R+Y+ D+K
Sbjct: 585 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGHRMYWVDAKH 642
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 643 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 668
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 669 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 712
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 157/343 (45%), Gaps = 68/343 (19%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1335 KCGLRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1394
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1395 NDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1444
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1445 VIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLVNNSLDEPRAIAVFPR 1504
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1505 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1560
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1561 --------------------------------RIESADLNGKLRQVLVS-HVSHPFAL-- 1585
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
T + RW++WTDW + I+R+ G N+ T+++
Sbjct: 1586 --------TQQQDRWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1619
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 48/227 (21%)
Query: 137 DHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D Q++VV + L+ GLA DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR
Sbjct: 826 DGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPR 885
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
++++P G +++WTDWG +P+IER GMD S R IIS+ + WPNGL +D ++R+Y+A
Sbjct: 886 DIVVEPMGG--YMYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWA 943
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ + K++E A +DGS +L+ QL
Sbjct: 944 DAGM-----KTIEF-----------------------------AGLDGSKRKVLIGSQLP 969
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
L L +Y WTDW + G +R T+
Sbjct: 970 HPFGLTLYGERIY-----------WTDWQTKSIQSADRLTGLDRETL 1005
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 127/248 (51%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L D TC PG S + +
Sbjct: 1029 CATENGGCSHLCLRSPNPSGFSCTCPTGINLMPDGKTCS-------PGMNSFLIFARRID 1081
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S H I A+L+ G H
Sbjct: 1082 VRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHRISRANLD--GSQH- 1138
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1139 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1197
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D + ++ +AD+
Sbjct: 1198 YHEMG--FMYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHT 1255
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1256 ERIEAADL 1263
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 138/344 (40%), Gaps = 94/344 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G C+ +C + +Y C+C G+ + +H C FL+ + R I + +
Sbjct: 730 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTED-- 784
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
D V+ D+ +A DW DSR + +
Sbjct: 785 --LSDDVIPLADVRSAVALDW--------DSRDDHV------------------------ 810
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+WTD + I R DG+ + ++ T + P GL +D T
Sbjct: 811 -----------YWTDVSTDT-ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTN------- 851
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KLYW D G + +I AN DGS ++L+ L
Sbjct: 852 -----------------------KLYWTDAGTD----RIEVANTDGSMRTVLIWENLDRP 884
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
+ +E Y ++WTDWG +P+IER GMD S R IIS+ + WPNGL +D
Sbjct: 885 RDIVVEPMGGY---------MYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDY 935
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++R+Y+AD+ + I+F DG+ R+ +I L F L G+
Sbjct: 936 GSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQLPHPFGLTLYGE 979
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 109/226 (48%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D ++ + + N ++LD + +VY
Sbjct: 1368 GKTCDPSPETYLLF----SSRGSIRRISLDTNDHTDVHVPVPELNNVISLDYDSVDGKVY 1423
Query: 254 FADSKLDFI---DCKSLEIKTNVNYST----------IFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I D ++T + + + R LYW D G N I +
Sbjct: 1424 YTDVFLDVIRRADLNGSNMETVIGHGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1479
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +LV+ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1480 LDGSCRKVLVNNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1530
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1531 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1576
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 105/222 (47%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D RI R +DGS II+T + +GL
Sbjct: 1095 VVVPINITMKNTIAIGVDPQEGKVYWSD-STLHRISRANLDGSQHEDIITTGLQTTDGLA 1153
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1154 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1179
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+
Sbjct: 1180 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRTVLIN 1230
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D + ++ +AD+ + I+ + +G R ++
Sbjct: 1231 NNLGWPNGLTVDKTSSQLLWADAHTERIEAADLNGANRHTLV 1272
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 138/334 (41%), Gaps = 52/334 (15%)
Query: 131 LEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + +++S L GLA D+ +YW D+ + IE +G+ R VL
Sbjct: 907 IERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGS 966
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
+ P G+ L G R ++WTDW + G +R T+ N + + +
Sbjct: 967 QLPHPFGLTL---YGER-IYWTDWQTKSIQSADRLTGLDRETLQEN---LENLMDIHVFH 1019
Query: 250 RR--VYFADSKLDFIDCKSLEIKT--NVNYS-TIFRKLYWIDEGGNGVP----------- 293
RR + + C L +++ +S T + + +G P
Sbjct: 1020 RRRPPVYTPCATENGGCSHLCLRSPNPSGFSCTCPTGINLMPDGKTCSPGMNSFLIFARR 1079
Query: 294 LKIGKANMD---GSNASILVSGQLYEALAL--DLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ + ++D ++ + ++ + +A+ D + G +Y+S R
Sbjct: 1080 IDVRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHR------------ 1127
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I R +DGS II+T + +GL +D R+VY+ D+ + I+ N DG+ R+ ++
Sbjct: 1128 ISRANLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQ 1187
Query: 409 DLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+L + A+ L E G +Y++ G
Sbjct: 1188 NL-----------DSPRAIVLYHEMGFMYWTDWG 1210
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 116/298 (38%), Gaps = 41/298 (13%)
Query: 129 ADLEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
A LE G D + ++++ L GL D + W D+ RIE D NG NR L
Sbjct: 1213 AKLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHTERIEAADLNGANRHTLV 1272
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P G+ L S +++WTDW + I R D S +I + P + +
Sbjct: 1273 SP-VQHPYGLTLLDS----YIYWTDW-QTRSIHR--ADKGTGSNVILVRSNLPGLMDIQA 1324
Query: 248 ATRR--VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN--------------- 290
R + F L C L + +S + G
Sbjct: 1325 VDRAHPLGFNKCGLRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSR 1384
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENPR 348
G +I D ++ + V +L ++LD + +G +YY+ +
Sbjct: 1385 GSIRRISLDTNDHTDVHVPVP-ELNNVISLDYDSVDGKVYYTDVFLD------------V 1431
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I R ++GSN T+I + +GL +D R +Y+ D+ + I+ DG+ R+ ++
Sbjct: 1432 IRRADLNGSNMETVIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLV 1489
>gi|432855199|ref|XP_004068121.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
[Oryzias latipes]
Length = 993
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/301 (36%), Positives = 155/301 (51%), Gaps = 46/301 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ +KVCD DC + +DE P C L EC G CS+ C +G C CP G L
Sbjct: 330 ECIDSSKVCDNVKDCKDWSDEPPKECGLNECADNNGGCSHICRDRRIGHECDCPSGYKLL 389
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG Y C C EGY ++ + TCKA+ +S +L+ +N
Sbjct: 390 -DKKTCGDIDECENPDACSQICINYKGDYKCECYEGYEMDPASKTCKAVGNS-PYLMFTN 447
Query: 123 RHSILVADLEE-----------------------------------------KGKDHRAQ 141
RH I DL K D Q
Sbjct: 448 RHEIRRIDLLRSEYTQVVPTLKNAVALDVDVSTNKMFWCDLYHRKIYSAYINKASDSSQQ 507
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ L EGLA DW+ +IYW DS I V +G R VL +++PR + +DP
Sbjct: 508 VTLIDSLHSPEGLAVDWVHKNIYWTDSGNKSISVATGDGRKRKVLIATELSEPRAIAVDP 567
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++W+DWGE+ +IE+ GM+G +R ++S I WPNG+TLD++ RR+Y+ DSKL
Sbjct: 568 HQG--FMYWSDWGEHAKIEKAGMNGVDRQVLVSDHIEWPNGITLDLSNRRLYWVDSKLHL 625
Query: 262 I 262
+
Sbjct: 626 L 626
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 176/431 (40%), Gaps = 108/431 (25%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC--KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ TK C+ DCP+ +DE ++ +C KF C GE +
Sbjct: 290 CIHGTKQCNKVHDCPDYSDEAGCVNITKCDGPRKF----------------RCKNGECID 333
Query: 63 NDSVT-----CQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH 106
+ V C+D +NEC + G CS +C + + + C C GY L D
Sbjct: 334 SSKVCDNVKDCKDWSDEPPKECGLNECADNNGGCSHICRDRRIGHECDCPSGYKL-LDKK 392
Query: 107 TCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
TC I+ N + + KG D++ + +D +G Y +
Sbjct: 393 TCGDIDE------CENPDACSQICINYKG-DYKCECYEGYEMDPASKTCKA-VGNSPYLM 444
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQ-----PRGMMLDPSPGTRWLFWTDWGENPRIER 221
+ NR E+ RI L + TQ + LD T +FW D
Sbjct: 445 FT--NRHEI------RRIDLLRSEYTQVVPTLKNAVALDVDVSTNKMFWCDLYHRKIYSA 496
Query: 222 I---GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
D S + T+I + ++ P GL +D +
Sbjct: 497 YINKASDSSQQVTLIDS-LHSPEGLAVDW------------------------------V 525
Query: 279 FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTR 336
+ +YW D G + + G DG +L++ +L E A+A+D G +Y
Sbjct: 526 HKNIYWTDSGNKSISVATG----DGRKRKVLIATELSEPRAIAVDPHQGFMY-------- 573
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
W+DWGE+ +IE+ GM+G +R ++S I WPNG+TLD++ RR+Y+ DSKL + +
Sbjct: 574 ---WSDWGEHAKIEKAGMNGVDRQVLVSDHIEWPNGITLDLSNRRLYWVDSKLHLLSSVD 630
Query: 397 YDGTGRQQVIL 407
G G ++V+L
Sbjct: 631 LSG-GNRKVLL 640
>gi|195349515|ref|XP_002041288.1| GM10225 [Drosophila sechellia]
gi|194122983|gb|EDW45026.1| GM10225 [Drosophila sechellia]
Length = 1071
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 173/350 (49%), Gaps = 58/350 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ KVC+ + DCPNG DE G C + EC K G C + C +G C C G L
Sbjct: 540 CIPNAKVCNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQCVNLEVGYRCECQDGYKLDA 599
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D TC D++ECE PG CSQ+C N GS+ C C GY+ NHT CKA + A L++S
Sbjct: 600 DQHTCVDIDECETPGICSQVCVNEIGSFKCECEAGYMRLLKNHTRCKA-SEGHASLLLSR 658
Query: 123 RHSILVADLEEKG-------------------------KDHRAQDIVVSGLD-------- 149
RH I L+ D Q I + +D
Sbjct: 659 RHDIRKIALDRPEMTSIVNSTKAATALDFVFRTGMIFWSDVATQSIYKAPIDEGNDRTVV 718
Query: 150 ------LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+GLA DWI H+Y+ D+ IE+ + G+ VL KD++ PR + LDP
Sbjct: 719 LTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLIKDSLDIPRSIALDPIE 778
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G W++W+DWG +PRIER GMDGS+R+ II+ + WPNG+TLD+ +R+Y+ D KL+ I
Sbjct: 779 G--WMYWSDWGASPRIERAGMDGSHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTIL 836
Query: 264 CKSLE--IKTNVNYSTIFRK-----------LYWIDEGGNGVPLKIGKAN 300
+ + + V YS+ + + +YW D G V K K N
Sbjct: 837 SSNYDGSQRQQVLYSSEYLRHPFSITTFEDYVYWTDWGKQAV-FKANKFN 885
>gi|410918333|ref|XP_003972640.1| PREDICTED: low-density lipoprotein receptor 1-like [Takifugu
rubripes]
Length = 834
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 193/393 (49%), Gaps = 60/393 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+++ KVC+ + DC + +DE CD EC+ G CS+ C LG C+CP G L
Sbjct: 269 ECISMEKVCNKQRDCVDNSDEPDEECDRNECQTNNGGCSHYCSDLKLGFNCSCPAGYSLK 328
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC+D++EC +P CSQ+C N GSY C C GY ++ TCKA + L +N
Sbjct: 329 MDKKTCEDIDECAEPDTCSQVCINLVGSYKCDCMGGYQIDPLTKTCKAQSGVVPMLYFTN 388
Query: 123 RH--------------------------------SILVADLEEK----------GKDHRA 140
+H +I +DL K G
Sbjct: 389 KHDVRRMTLDRSEYVRLIPQLKNVVALDIDMPNKTIFWSDLSLKKIYSSKIDTAGNSSHH 448
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++ SG+ EGLA DWI G+IYW+DS L I V +G+ R L +N+ +PR +++D
Sbjct: 449 TVVIDSGIGAPEGLAVDWIHGNIYWIDSALQTISVATTDGSRRKTLITENLEKPRAIVVD 508
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P ++FWTDWG+ +IE+ G++G +R +++ I WPNG+TLD++ R+Y+ DSKL
Sbjct: 509 PI--NNFMFWTDWGQQAKIEKCGLNGMDRIALVTDNIVWPNGITLDVSNHRLYWVDSKLH 566
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM---DGSNASILVSGQLYE- 316
+ S+++ +S +F + + + + L + + + D +++++ + +L
Sbjct: 567 TL--SSIDVNGGTRHSVLFSEEHL----SHPISLTVFQNQVFWTDMDHSAVMSANRLTGR 620
Query: 317 -----ALALDLENGMLYYSTLKCTRWLFWTDWG 344
A+ LD ++ Y LK W G
Sbjct: 621 DIRTLAVELDQPEDIILYHDLKQPTGTNWCSQG 653
>gi|73983330|ref|XP_540748.2| PREDICTED: low-density lipoprotein receptor-related protein 4
[Canis lupus familiaris]
Length = 2021
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/420 (31%), Positives = 189/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 439 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHT 498
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D CQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 499 GYRLTEDGHMCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALG-PEPV 557
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 558 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 617
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 618 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 677
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A R+Y+ D+K
Sbjct: 678 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGHRMYWVDAKH 735
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 736 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 761
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 762 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 805
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1428 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1487
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1488 SDHTDVHIPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1537
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1538 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1597
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1598 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1653
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +L+S + AL
Sbjct: 1654 --------------------------------RIESADLNGKLRQVLLS-HVSHPFALTQ 1680
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1681 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1711
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/248 (36%), Positives = 131/248 (52%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L +D TC PG S + +
Sbjct: 1122 CARENGGCSHLCLRSPNPSGFSCTCPTGINLMSDGKTCS-------PGMNSFLIFARRID 1174
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S HSI A+L+ G H
Sbjct: 1175 IRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHSISRANLD--GSQH- 1231
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL +N+ PR ++L
Sbjct: 1232 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWENLDSPRAIVL 1290
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +IS + WPNGLT+D A+ ++ +AD+
Sbjct: 1291 YHEMG--FMYWTDWGENAKLERSGMDGSDRTVLISNNLGWPNGLTVDKASSQLLWADAHT 1348
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1349 ERIEAADL 1356
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 142/326 (43%), Gaps = 91/326 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----------- 126
G C+ +C + +Y C+C G+ + +H C FL+ + R I
Sbjct: 823 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTEDLS 879
Query: 127 ----------------------------LVADLEEKGK-DHRAQDIVV-SGLDLVEGLAY 156
+ +D + K D Q++VV + L+ GLA
Sbjct: 880 DDVIPLADVRSAVALDWDSRDDHVYWTDVSSDTISRAKWDGTGQEVVVDTSLESPAGLAI 939
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR ++++P G +++WTDWG +
Sbjct: 940 DWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGG--YMYWTDWGAS 997
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD S+R IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 998 PKIERAGMDASSRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF------- 1045
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
A +DGS +L+ QL L L +Y
Sbjct: 1046 ----------------------AGLDGSKRKVLIGSQLPHPFGLTLYGERIY-------- 1075
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G +R T+
Sbjct: 1076 ---WTDWQTKSIQSADRLTGLDRETL 1098
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1461 GKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHIPVPELNNVISLDYDSVDGKVY 1516
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1517 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1572
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1573 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1623
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1624 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLL 1669
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 137/331 (41%), Gaps = 94/331 (28%)
Query: 78 GYCSQMCTNTK--GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G CS +C + + C+C G L D TC +S FLI + R
Sbjct: 1127 GGCSHLCLRSPNPSGFSCTCPTGINLMSDGKTCSPGMNS--FLIFARR------------ 1172
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
DI + LD+ Y+ D V+ NIT
Sbjct: 1173 -----IDIRMVSLDIP------------YFAD-----------------VVVPINITMKN 1198
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ + P ++W+D + I R +DGS II+T + +GL +D
Sbjct: 1199 TIAIGVDPQEGKVYWSDSTLH-SISRANLDGSQHEDIITTGLQTTDGLAVD--------- 1248
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
I RK+YW D G N +I N+DGS +LV L
Sbjct: 1249 ---------------------AIGRKVYWTDTGTN----RIEVGNLDGSMRKVLVWENLD 1283
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +IS + WPNGLT+
Sbjct: 1284 SPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRTVLISNNLGWPNGLTV 1334
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1335 DKASSQLLWADAHTERIEAADLNGGSRHTLV 1365
>gi|149567113|ref|XP_001519450.1| PREDICTED: low-density lipoprotein receptor-related protein 4,
partial [Ornithorhynchus anatinus]
Length = 1486
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 189/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 326 RCIGQRKLCNGIDDCADNSDESPQQNCRPRTGEENCNVDNGGCAQKCQMARGAVQCTCHT 385
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTN+ G++ C C GY L D +CKA+
Sbjct: 386 GYRLTEDGRTCQDVNECAEEGYCSQGCTNSDGAFQCWCEAGYELRPDRRSCKALG-PEPV 444
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 445 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 504
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 505 VEEVVSTGLESPGGLAVDWLHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 564
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A R+Y+ D+K
Sbjct: 565 HPMQGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGHRMYWVDAKH 622
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +A++DGSN ++S L A
Sbjct: 623 HVIE----------------------------------RADLDGSNRKAVISQGLPHPFA 648
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 649 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 692
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 109/208 (52%), Gaps = 48/208 (23%)
Query: 137 DHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D Q++VV + L+ GLA DW+ +YW D+ +RIEV + +GT R VL +N+ +PR
Sbjct: 806 DGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGTMRTVLIWENLDRPR 865
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
++++P G +++WTDWG +P+IER GMD S+R IIS+ + WPNGL +D A++R+Y+A
Sbjct: 866 DIVVEPMGG--FMYWTDWGASPKIERAGMDASSRRVIISSNLTWPNGLAIDYASQRLYWA 923
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ + K++E A +DGS +L+ QL
Sbjct: 924 DAGM-----KTIEF-----------------------------AGLDGSKRKVLIGSQLP 949
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDW 343
L L +Y WTDW
Sbjct: 950 HPFGLTLYGERIY-----------WTDW 966
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 118/246 (47%), Gaps = 22/246 (8%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C G CS+ C P P G CTCP G L D TC G S + +
Sbjct: 1009 CAADNGGCSHLCLRAPPPKGFSCTCPTGINLLPDGKTCSS-------GMSSFLIFARRTD 1061
Query: 91 ---------YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQ 141
Y + N ++ + S+ ++ G H +
Sbjct: 1062 VRMVSLDIPYFADVVVPINVTMKNTIAVGVDPQEGKVYWSDSTLRRISRANLDGSLH--E 1119
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1120 DIITTGLQTTDGLAVDSIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVLYH 1179
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G+ ++WTDWGEN ++ER GMDGS+R+ +IS + WPNGLT+D A R+ +AD+ +
Sbjct: 1180 ETGS--MYWTDWGENAKLERAGMDGSDRTVLISNNLGWPNGLTVDKAGSRLLWADAHTER 1237
Query: 262 IDCKSL 267
I+ L
Sbjct: 1238 IEAADL 1243
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 108/222 (48%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ N+T + + P ++W+D RI R +DGS II+T + +GL
Sbjct: 1075 VVVPINVTMKNTIAVGVDPQEGKVYWSD-STLRRISRANLDGSLHEDIITTGLQTTDGLA 1133
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D +I RK+YW D G N +I N+DGS
Sbjct: 1134 VD------------------------------SIGRKVYWTDTGTN----RIEVGNLDGS 1159
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ +LY+ T ++WTDWGEN ++ER GMDGS+R+ +IS
Sbjct: 1160 MRKVLVWQNLDSPRAI-----VLYHETGS----MYWTDWGENAKLERAGMDGSDRTVLIS 1210
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D A R+ +AD+ + I+ + +G R+ ++
Sbjct: 1211 NNLGWPNGLTVDKAGSRLLWADAHTERIEAADLNGANRRTLV 1252
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 140/346 (40%), Gaps = 98/346 (28%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G C+ +C + +Y C+C G+ ++++ FL+ + R I + +
Sbjct: 710 GGCTHLCLPSGQNYTCACPTGFRKISSQACAQSLD---KFLLFARRMDIRRISFDTED-- 764
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
D V+ D+ +A DW DSR + +
Sbjct: 765 --LSDDVIPLADVRSAVALDW--------DSRDDSV------------------------ 790
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+WTD + I R DG+ + ++ T + P GL +D T
Sbjct: 791 -----------YWTDVSTDT-ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTN------- 831
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KLYW D G + +I AN DG+ ++L+ L
Sbjct: 832 -----------------------KLYWTDAGTD----RIEVANTDGTMRTVLIWENLDRP 864
Query: 318 LALDLE--NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
+ +E G +Y WTDWG +P+IER GMD S+R IIS+ + WPNGL +
Sbjct: 865 RDIVVEPMGGFMY-----------WTDWGASPKIERAGMDASSRRVIISSNLTWPNGLAI 913
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
D A++R+Y+AD+ + I+F DG+ R+ +I L F L G+
Sbjct: 914 DYASQRLYWADAGMKTIEFAGLDGSKRKVLIGSQLPHPFGLTLYGE 959
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 19/194 (9%)
Query: 20 NGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----E 75
D G +C K G CS+ C P P G C CP G L D TC E
Sbjct: 1303 QAVDRGRQLGTNKCGLKNGGCSHLCLPRPSGFSCACPTGIQLKGDGHTCDPSPETYLLFS 1362
Query: 76 QPGYCSQMCTNTKGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
G ++ +T + N L+YD+ K + ++ FL + R + ++
Sbjct: 1363 SRGSIRRISLDTSDHTDVHVPVPDLNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSN 1421
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
+E ++ GL +GLA DW+ ++YW D+ N IE +G+ R VL ++
Sbjct: 1422 MET---------VIGQGLKTTDGLAVDWVARNLYWTDTGRNTIEAARLDGSCRKVLINNS 1472
Query: 191 ITQPRGMMLDPSPG 204
+ +PR + P G
Sbjct: 1473 LDEPRAIAAFPRKG 1486
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 117/298 (39%), Gaps = 41/298 (13%)
Query: 129 ADLEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
A LE G D + +++S L GL D G + W D+ RIE D NG NR L
Sbjct: 1193 AKLERAGMDGSDRTVLISNNLGWPNGLTVDKAGSRLLWADAHTERIEAADLNGANRRTLV 1252
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P G+ L S +++WTDW + I R D S +I + P + +
Sbjct: 1253 SP-VQHPYGLTLLDS----YIYWTDW-QTRSIHR--ADKSTGGNVILVRANLPGLMDIQA 1304
Query: 248 ATRRVYFADSKLDFID--CKSLEIKTNVNYSTIFRKLYWIDEGGN--------------- 290
R +K + C L + +S + G+
Sbjct: 1305 VDRGRQLGTNKCGLKNGGCSHLCLPRPSGFSCACPTGIQLKGDGHTCDPSPETYLLFSSR 1364
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENPR 348
G +I D ++ + V L ++LD + +G +YY+ +
Sbjct: 1365 GSIRRISLDTSDHTDVHVPVP-DLNNVISLDYDSVDGKVYYTDVFLD------------V 1411
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I R ++GSN T+I + +GL +D R +Y+ D+ + I+ DG+ R+ +I
Sbjct: 1412 IRRADLNGSNMETVIGQGLKTTDGLAVDWVARNLYWTDTGRNTIEAARLDGSCRKVLI 1469
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 131 LEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D ++ +++S L GLA D+ +YW D+ + IE +G+ R VL
Sbjct: 887 IERAGMDASSRRVIISSNLTWPNGLAIDYASQRLYWADAGMKTIEFAGLDGSKRKVLIGS 946
Query: 190 NITQPRGMMLDPSPGTRWLFWTDW 213
+ P G+ L G R ++WTDW
Sbjct: 947 QLPHPFGLTL---YGER-IYWTDW 966
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 59/142 (41%), Gaps = 27/142 (19%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI-----------------ISTKIY 238
G DPSP T LF I RI +D S+ + + + K+Y
Sbjct: 1348 GHTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPDLNNVISLDYDSVDGKVY 1403
Query: 239 WPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGK 298
+ + + LD+ RR S ++ + + L+ + + R LYW D G N I
Sbjct: 1404 YTD-VFLDV-IRRADLNGSNMETVIGQGLKTTDGLAVDWVARNLYWTDTGRN----TIEA 1457
Query: 299 ANMDGSNASILVSGQLYEALAL 320
A +DGS +L++ L E A+
Sbjct: 1458 ARLDGSCRKVLINNSLDEPRAI 1479
>gi|156392329|ref|XP_001636001.1| predicted protein [Nematostella vectensis]
gi|156223100|gb|EDO43938.1| predicted protein [Nematostella vectensis]
Length = 678
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/379 (34%), Positives = 192/379 (50%), Gaps = 72/379 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ +KVCD CP+G DE CD+ ECK G C C T C+C G L +D
Sbjct: 266 CIANSKVCDATPHCPHGEDER-NCDIDECKSFNGHCLQLCTNTKTSFYCSCFSGYELMDD 324
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
+C+D+NECE PG CSQ C NTKGS+ CSC EGYVLE D CKA+ +++ ++R+
Sbjct: 325 RKSCRDINECEIPGMCSQKCYNTKGSFKCSCMEGYVLEPDGRRCKALG-PRPYVLFTDRN 383
Query: 125 SILVADLEEKGKDHRA-----QDIVVSGLDLVE--------------------------- 152
SI + + GK+++ +D G D+ E
Sbjct: 384 SIRL--IMTDGKEYKQAVQGLKDARTLGFDVKESMLYWTDKAATAIQKAKMVPDTTIETV 441
Query: 153 ---------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
GLA DW+G +YW D N IEV + +G+N + L + +P ++LDP+
Sbjct: 442 HETGLVEPAGLAIDWVGRKMYWADPGANTIEVSELDGSNTMTLISSGLDKPSAVVLDPTE 501
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWG+ +IER MDG+ R +IS + + P GL +D +TRR+Y+ DSKLD I
Sbjct: 502 G--FIYWTDWGDPAKIERASMDGTARKVLISGEHLERPAGLAIDYSTRRLYWIDSKLDVI 559
Query: 263 DCKSL---EIKTNVNYS-------TIFR-KLYWIDEGGNGVPLKIGKAN-MDGSNASILV 310
+L E++ +N T+F +YW D KI KAN G N ++LV
Sbjct: 560 KHCNLNGTEVRVVINTGIDNPTAITVFEDHIYWTDS------RKIYKANKFTGKNMTVLV 613
Query: 311 SGQLYEALALDLENGMLYY 329
+ A E+ +Y+
Sbjct: 614 NN------AASPEDAHIYH 626
>gi|291384940|ref|XP_002708908.1| PREDICTED: low density lipoprotein receptor-related protein 4
[Oryctolagus cuniculus]
Length = 1918
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 160/537 (29%), Positives = 232/537 (43%), Gaps = 111/537 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P C G C+ C CTC
Sbjct: 336 RCIGQRKLCNGVNDCGDNSDESPQQSCRPRTGEESCTVNNGGCAQKCQMVRGTVQCTCHT 395
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L D TC D+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 396 GYRLMEDGRTCHDVNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALG-PEPV 454
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 455 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 514
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 515 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 574
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 575 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 632
Query: 260 DFIDCKSLE-------IKTNVNYS---TIFR-KLYWIDEGGNGV---------------- 292
I+ +L+ I + + T+F LYW D +
Sbjct: 633 HVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRN 692
Query: 293 ----PLKI----------GK----ANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
P+ I GK N G L SGQ Y G S+ C
Sbjct: 693 KLHFPMDIHTLHPQRQPAGKNRCGENNGGCTHLCLPSGQNYTCAC---PTGFRKISSHAC 749
Query: 335 TRWL-FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR--RVYFADSKLDF 391
+ L + + I RI D + S + + + LD +R VY+ D D
Sbjct: 750 AQSLDKFLLFARRMDIRRISFDTEDLSDDVIPLADVRSAVALDWDSRDDHVYWTDVSTDT 809
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPA-LALDLENGMLYYSTEGAEFLK 447
I +DGTG Q +++D +E PA LA+D LY++ G + ++
Sbjct: 810 ISRAKWDGTG--QEVVVDTSLE----------SPAGLAIDWVTNKLYWTDAGTDRIE 854
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D +C E G ++ +T
Sbjct: 1325 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKSCDPSPETYLLFSSRGSIRRISLDT 1384
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1385 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1434
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1435 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1494
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1495 KG--YLFWTDWGHIAKIERAHLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1550
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1551 --------------------------------RIESADLNGKLRQVLVS-HVSHPFALTQ 1577
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G ++ T+++
Sbjct: 1578 QD-----------RWIYWTDW-QTKSIQRVDKYSGRSKETVLA 1608
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 143/333 (42%), Gaps = 92/333 (27%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---- 126
N C E G C+ +C + +Y C+C G+ + +H C FL+ + R I
Sbjct: 713 NRCGENNGGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRIS 769
Query: 127 -----------------------------------LVADLEEKGK-DHRAQDIVV-SGLD 149
+ D + K D Q++VV + L+
Sbjct: 770 FDTEDLSDDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLE 829
Query: 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
GLA DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR ++++P G +++
Sbjct: 830 SPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGG--YMY 887
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEI 269
WTDWG +P+IER GMD S R IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 888 WTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF 942
Query: 270 KTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
A +DGS +L+ QL L L +Y
Sbjct: 943 -----------------------------AGLDGSKRKVLIGSQLPHPFGLTLYGERIY- 972
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G +R T+
Sbjct: 973 ----------WTDWQTKSIQSADRLTGLDRETL 995
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 126/248 (50%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L D TC PG S + +
Sbjct: 1019 CAVENGGCSHLCLRSPNPNGFSCTCPTGINLLPDGKTCS-------PGMNSFLIFARRID 1071
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S H I A L+ G H
Sbjct: 1072 IRMVSLDIPYFADVVVPINMTMKNTIAIGVDPQEGKVYWSDSTLHRISRASLD--GSQH- 1128
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1129 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1187
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D + ++ +AD+
Sbjct: 1188 YHEMG--FMYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHT 1245
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1246 ERIEAADL 1253
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1358 GKSCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1413
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1414 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1469
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1470 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERAHLDGSERK 1520
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1521 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1566
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ N+T + + P ++W+D + RI R +DGS II+T + +GL
Sbjct: 1085 VVVPINMTMKNTIAIGVDPQEGKVYWSDSTLH-RISRASLDGSQHEDIITTGLQTTDGLA 1143
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1144 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1169
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+
Sbjct: 1170 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRTVLIN 1220
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D + ++ +AD+ + I+ + +G R ++
Sbjct: 1221 NNLGWPNGLTVDKTSSQLLWADAHTERIEAADLNGANRHTLV 1262
>gi|260828979|ref|XP_002609440.1| hypothetical protein BRAFLDRAFT_93487 [Branchiostoma floridae]
gi|229294796|gb|EEN65450.1| hypothetical protein BRAFLDRAFT_93487 [Branchiostoma floridae]
Length = 1291
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 175/381 (45%), Gaps = 93/381 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV L VCD C NG DEG C C+ C+PTP G LC C G +S+D
Sbjct: 833 CVQLQAVCDRVPHCRNGNDEGGKCGPQLCQTSPCAGPADCYPTPDGPLCHCHEGFNISSD 892
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
++TC+D+NEC PG CSQ C NTKGSY CSC +GY +E CKA + L++S+RH
Sbjct: 893 NITCEDVNECATPGSCSQGCDNTKGSYRCSCRDGYYMELGT-KCKAQGPN-PVLVVSSRH 950
Query: 125 SILVADL-----------------------EEK-----------------GKDHRAQDIV 144
I DL EE+ G+D R ++
Sbjct: 951 DIRTQDLRTGQYNSVVNHLRNTVALSFDSVEERLYWTDVSDEVISSVKLGGEDIRR--VI 1008
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+GL +GLA DW+G ++YW D+ N I V +G ++ VL DN+ QPR + +DP G
Sbjct: 1009 TTGLKTPDGLAVDWVGRNLYWTDAGYNTISVSTMDGAHQTVLLGDNLDQPRAIAVDPRNG 1068
Query: 205 ---------------TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++WTDWG P+IE GMDGS R + + + WPN L +D +
Sbjct: 1069 PVISILYPDLCHVVAASLMYWTDWGYEPKIEVAGMDGSQRRVLENQLVGWPNDLVIDFSL 1128
Query: 250 RRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL 309
++Y+ D+KLD + + ++DG N+ +
Sbjct: 1129 DKIYWIDAKLDIVQ----------------------------------RMDLDGGNSETV 1154
Query: 310 VSGQLYEALALDLENGMLYYS 330
+ GQL +L + LY+S
Sbjct: 1155 LEGQLQHPFSLAVFEDFLYWS 1175
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 162/374 (43%), Gaps = 82/374 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGE----- 59
C++ T +CDG+ DC +G DE +C +C T TC G
Sbjct: 244 CISHTWLCDGELDCRDGFDE------QDCGSSHPPVLPSCKATQF----TCSDGSCIDRS 293
Query: 60 ILSNDSVTCQD---------MNECE-QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
+L N C+D ++ C G CSQ+C T+ S+ CSC +GY +E D TC+
Sbjct: 294 LLCNGDEDCRDGSDEGTQCVVDHCVLHFGACSQLCDATESSFKCSCVDGYKMEPDGSTCR 353
Query: 110 AINHSAAFLIISNRHSIL---------------------------------------VAD 130
A+ +L+++ +SI
Sbjct: 354 AMGEEP-YLLVAESNSIRKVVHIHHGNRTDYMPLLTGLGSPTALDYHLAGQSLFWVESGS 412
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
+ G D +++GL VE +A DW+G ++YW DS N I V +G + + + +
Sbjct: 413 INSAGLDGEGNRTILAGLGEVESIAVDWVGENLYWTDSANNYIGVSTLDGLYKTSVVR-S 471
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ + ++LDP R ++W+D G P+IE GMDGS R I+ K+ WP GL+LD +
Sbjct: 472 LGLLKAIVLDPK--NRNMYWSDCGAIPKIEVSGMDGSGREMIVRKKLLWPVGLSLDHPSN 529
Query: 251 RVYFADSKLDFIDC-----------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKA 299
R+++ DSKL ++ + L++ + + +YW D+ N V K+
Sbjct: 530 RLFWMDSKLKVLESTDLNGENRYLIRGLDVGQPFSMALFEDLVYWSDDRSNKV--KLAHK 587
Query: 300 NMDGSNASILVSGQ 313
M G +LV Q
Sbjct: 588 YM-GDRVYVLVRAQ 600
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 16/145 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDG-SNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
+ LYW D N IG + +DG S++ S L +A+ LD +N R
Sbjct: 441 VGENLYWTDSANN----YIGVSTLDGLYKTSVVRSLGLLKAIVLDPKN-----------R 485
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
++W+D G P+IE GMDGS R I+ K+ WP GL+LD + R+++ DSKL ++ +
Sbjct: 486 NMYWSDCGAIPKIEVSGMDGSGREMIVRKKLLWPVGLSLDHPSNRLFWMDSKLKVLESTD 545
Query: 397 YDGTGRQQVILIDLMVEFTNDLMGD 421
+G R + +D+ F+ L D
Sbjct: 546 LNGENRYLIRGLDVGQPFSMALFED 570
>gi|17224416|gb|AAL36970.1| LDLR dan [Mus musculus]
Length = 1905
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 190/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CT
Sbjct: 323 RCIGQRKLCNGINDCGDSSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTRHT 382
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTNT+G++ C C GY L D +CKA+
Sbjct: 383 GYRLTEDGRTCQDVNECAEEGYCSQGCTNTEGAFQCWCEAGYELRPDRRSCKALG-PEPV 441
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 442 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 501
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL ++ +PR + L
Sbjct: 502 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIAL 561
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 562 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 619
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 620 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 645
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 646 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 689
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 156/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P C CP G L D TC E G ++ +T
Sbjct: 1312 KCGSRNGGCSHLCLPRPSSFSCACPTGIQLKGDRKTCDPSPETYLLFSSRGSIRRISLDT 1371
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1372 DDHTDVHVPVPGLNNVISLDYDSVHGK-VYYTDVFLDVIRRADLNGSNMET--------- 1421
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1422 VIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1481
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1482 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1537
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1538 --------------------------------RIESADLNGKLRQVLVS-HVSHPFALTQ 1564
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1565 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1595
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 142/326 (43%), Gaps = 91/326 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----------- 126
G C+ +C + +Y C+C G+ + ++H C FL+ + R I
Sbjct: 707 GGCTHLCLPSGQNYTCACPTGF-RKINSHACA--QSLDKFLLFARRMDIRRISFDTEDLS 763
Query: 127 ----------------------------LVADLEEKGK-DHRAQDIVV-SGLDLVEGLAY 156
+ D + K D Q++VV + L+ GLA
Sbjct: 764 DDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAI 823
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR ++++P G +++WTDWG +
Sbjct: 824 DWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGG--YMYWTDWGAS 881
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD S+R IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 882 PKIERAGMDASSRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF------- 929
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
A +DGS +L+ QL L L +Y
Sbjct: 930 ----------------------AGLDGSKRKVLIGSQLPHPFGLTLYGQRIY-------- 959
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G +R T+
Sbjct: 960 ---WTDWQTKSIQSADRLTGLDRETL 982
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 128/248 (51%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L D TC PG S + +
Sbjct: 1006 CAVENGGCSHLCLRSPNPSGFSCTCPTGINLLRDGKTCS-------PGMNSFLIFARRID 1058
Query: 90 SYICSCNEGY---VLEYDNHTCK---AIN----HSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K AI + S H I A L+ G H
Sbjct: 1059 VRMVSLDIPYFADVVVPINMTMKNTIAIGVDPLEGKVYWSDSTLHRISRASLD--GSQH- 1115
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1116 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1174
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D + ++ +AD+
Sbjct: 1175 YHEMG--FMYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHT 1232
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1233 ERIEVADL 1240
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 151/360 (41%), Gaps = 88/360 (24%)
Query: 111 INHSAAFLIISNRHS--ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS 168
++ +++ L+ ++ H+ I VADL + +VS + GL + +IYW D
Sbjct: 1218 VDKTSSQLLWADAHTERIEVADLNGANRH-----TLVSPVQHPYGLTL--LDSYIYWTDW 1270
Query: 169 RLNRIEVCDENGTNRIVLAKDNI-----------TQPRGM-------------------- 197
+ I D++ + ++L + N+ QP G
Sbjct: 1271 QTRSIHRADKSTGSNVILVRSNLPGLMDIQAVDRAQPLGFNKCGSRNGGCSHLCLPRPSS 1330
Query: 198 ----------------MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
DPSP T LF I RI +D + + + N
Sbjct: 1331 FSCACPTGIQLKGDRKTCDPSPETYLLF----SSRGSIRRISLDTDDHTDVHVPVPGLNN 1386
Query: 242 GLTLDIAT--RRVYFADSKLDFI---DCKSLEIKTNVNYST----------IFRKLYWID 286
++LD + +VY+ D LD I D ++T + + + R LYW D
Sbjct: 1387 VISLDYDSVHGKVYYTDVFLDVIRRADLNGSNMETVIGHGLKTTDGLAVDWVARNLYWTD 1446
Query: 287 EGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
G N I + +DGS +L++ L E A+ + +LFWTDWG
Sbjct: 1447 TGRN----TIEASRLDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHI 1493
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1494 AKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1553
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 136/333 (40%), Gaps = 98/333 (29%)
Query: 78 GYCSQMCTNTK--GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G CS +C + + C+C G L D TC +S FLI + R + + L+
Sbjct: 1011 GGCSHLCLRSPNPSGFSCTCPTGINLLRDGKTCSPGMNS--FLIFARRIDVRMVSLDIP- 1067
Query: 136 KDHRAQDIVVSGLDLVEGLA--YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
+ A +V + + +A D + G +YW DS L+
Sbjct: 1068 --YFADVVVPINMTMKNTIAIGVDPLEGKVYWSDSTLH---------------------- 1103
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
RI R +DGS II+T + +GL +D
Sbjct: 1104 ------------------------RISRASLDGSQHEDIITTGLQTTDGLAVD------- 1132
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
I RK+YW D G N +I N+DGS +LV
Sbjct: 1133 -----------------------AIGRKVYWTDTGTN----RIEVGNLDGSMRKVLVWQN 1165
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGL
Sbjct: 1166 LDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGL 1216
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
T+D + ++ +AD+ + I+ + +G R ++
Sbjct: 1217 TVDKTSSQLLWADAHTERIEVADLNGANRHTLV 1249
>gi|189236723|ref|XP_001814959.1| PREDICTED: similar to AGAP000037-PA [Tribolium castaneum]
Length = 2041
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/299 (38%), Positives = 154/299 (51%), Gaps = 43/299 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGAL-CTCPPGEILSN 63
C++ VCDGK DCP G DE GC K C+ C T G C C PG +++
Sbjct: 534 CISRKHVCDGKKDCPKGEDES-GCPTKRECEKHTNCTQLCITTVDGRKGCDCIPGYKIAS 592
Query: 64 DSVTCQDMNEC--EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL--- 118
D +TC+D+NEC CSQ C NT+GS+ C C GYVL D TCKAI L
Sbjct: 593 DGITCEDINECLYATDPVCSQTCNNTQGSFRCGCMTGYVLRPDLRTCKAIGDPPTLLFAN 652
Query: 119 ----------------IISNRHSILVADLEEKGK-----------DHRA-------QDIV 144
I+ H+ + D K RA DI+
Sbjct: 653 RIDIRQVSLSNAKYTPILKGLHNAIALDYHYDKKLIFWSDVSMDVIRRATMNGTEITDII 712
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
GL G+A DWI I+W DS RIEV +G +R ++A ++I +PR + + PG
Sbjct: 713 KWGLQSPGGVALDWIHDLIFWTDSGTRRIEVASLDGKHRAIIAGNDIDKPRAITV--HPG 770
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
++FWTDWG NP+IER MDGSNR +II+ ++WPNGLTLD + R+Y+AD+K + I+
Sbjct: 771 EAYVFWTDWGPNPKIERAEMDGSNRRSIINESVFWPNGLTLDYTSNRIYWADAKHNVIE 829
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 147/356 (41%), Gaps = 103/356 (28%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE----- 132
G C+ +C + SY C C G L+ D +C+ LI + + + + L+
Sbjct: 913 GGCAHLCLPNRKSYTCVCRMGQKLKSDKKSCQK---PEKLLIFARKKDLRIKHLDNNAVH 969
Query: 133 -------------------------------EKGKDHRA-------QDIVVSGLDLVEGL 154
E+ +RA + IV S + GL
Sbjct: 970 QHSLVIPLDGVKSAVAIAWDSESDYIFWTDVERDTINRALWNGSNQEVIVYSNIVTPAGL 1029
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DW+ IYW D+ RIEV NG R +L DN+ +PR +++DP G +++W+DW
Sbjct: 1030 ALDWLTNKIYWTDADTTRIEVAKTNGEMRSLLVWDNLYKPRDIVVDPIGG--YMYWSDWA 1087
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
E P+IER MDG+ RS I+S+ + WPNGL +D + ++Y+AD I+C
Sbjct: 1088 ETPKIERAAMDGTMRSVIVSSNLTWPNGLAIDHSAGKIYWADGGTKAIEC---------- 1137
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL-ENGMLYYSTLK 333
+N DGS ++ +L LD+ EN
Sbjct: 1138 ------------------------SNFDGSKRKTIIGPELPHPFGLDVFEN--------- 1164
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
+++WTDW IER + T++++ I D+ RV+ + K+
Sbjct: 1165 ---YIYWTDW-RTLTIERANKNTGLNRTVLASDI-------TDLMDVRVFHRNRKM 1209
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 110/233 (47%), Gaps = 46/233 (19%)
Query: 78 GYCSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI--------LV 128
G C+ +C K ++ C+C G LE D TC N FLI+++R+ I +
Sbjct: 1219 GGCTHLCLLKPKNNHTCACPTGIKLEEDGKTCA--NGPINFLILAHRNVIRQISLDVPYI 1276
Query: 129 AD--------------------------------LEEKGKD-HRAQDIVVSGLDLVEGLA 155
AD +++ +D ++ I++ L EG+A
Sbjct: 1277 ADVVLPLPPLKLVTSVDVDRKTGEIYWIDQAEDVIQKSTRDGQNSKLIIMHKLQTPEGIA 1336
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
D G IYW D N +EV + +G+NR VL N+ PR + L G +FW+DWG+
Sbjct: 1337 VDSTGRKIYWTDGERNSVEVAELDGSNRKVLFSTNLDNPRAITLHYHHGL--MFWSDWGK 1394
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
+IE MDG+ R +I+ + WPNGL +D T R+Y+ D+KL I+ L+
Sbjct: 1395 KAKIEVAQMDGTKRKALITDGLVWPNGLAIDRPTERLYWNDAKLHTIESSDLK 1447
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 99/194 (51%), Gaps = 19/194 (9%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++IV S L +G+A DW+ +IYW ++ IEV +G+NR + N+ PR + +
Sbjct: 1627 RNIVHSNLSSPDGIAVDWVANNIYWTNTGNKVIEVAKIDGSNRKTIVSTNLQDPRSIAVF 1686
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL- 259
P G +L+WTDWG+ P+IER +DGS R +I+ ++ +P GL +D +R+Y+ D+ L
Sbjct: 1687 PRKG--YLYWTDWGK-PKIERSFLDGSGRRILINEQLSFPIGLAIDFVDKRLYWIDATLN 1743
Query: 260 -DFIDCKSLEIKTNV----------NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
+ I+ L + V + + +YW D V + +A+ +
Sbjct: 1744 EERIETSDLHGRNRVVLDIPQTHPFSLTQFGEHIYWTD----WVHKTVARADKTSGKDVV 1799
Query: 309 LVSGQLYEALALDL 322
+V L A+ + +
Sbjct: 1800 IVRSYLEAAMGVTM 1813
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 46/203 (22%)
Query: 206 RWLFWTDWGENPRIERIGM-DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
R +++TD G N I+ + M + S+ I+ + + P+G+ +D +Y+ ++
Sbjct: 1603 RLIYYTDIGNN-VIQSVNMFNLSDTRNIVHSNLSSPDGIAVDWVANNIYWTNT------- 1654
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
GN V I A +DGSN +VS L + ++
Sbjct: 1655 ------------------------GNKV---IEVAKIDGSNRKTIVSTNLQDPRSI---- 1683
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384
+ +L+WTDWG+ P+IER +DGS R +I+ ++ +P GL +D +R+Y+
Sbjct: 1684 -----AVFPRKGYLYWTDWGK-PKIERSFLDGSGRRILINEQLSFPIGLAIDFVDKRLYW 1737
Query: 385 ADSKLDFIDFCNYDGTGRQQVIL 407
D+ L+ D GR +V+L
Sbjct: 1738 IDATLNEERIETSDLHGRNRVVL 1760
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 56/293 (19%), Positives = 121/293 (41%), Gaps = 41/293 (13%)
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
+ + ++ GL GLA D +YW D++L+ IE D G +R ++ + P G++
Sbjct: 1407 KRKALITDGLVWPNGLAIDRPTERLYWNDAKLHTIESSDLKGHDRKIIVTE-APHPYGLV 1465
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
+ ++WTDW +G++++ I +GL + + A++
Sbjct: 1466 V----VGNHIYWTDWQTQALHRADKTNGTDKAKIREKL----DGLMDVRSVQSDNIAENA 1517
Query: 259 LDFID--CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN---MDGSNASILVSGQ 313
+ C L ++ + +S +K+ KAN + ++ L+
Sbjct: 1518 CGGNNGGCSHLCLRNSGGFSC-----------ACPTGIKMSKANPKVCEKQPSTYLLLAT 1566
Query: 314 LYEALALDLENGMLYYSTLKC--------------TRWLFWTDWGENPRIERIGM-DGSN 358
+ + L+ L+ TL R +++TD G N I+ + M + S+
Sbjct: 1567 RFALNRISLDTDDLWDVTLPIEDVNNVIDVDFHWEKRLIYYTDIGNN-VIQSVNMFNLSD 1625
Query: 359 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
I+ + + P+G+ +D +Y+ ++ I+ DG+ R+ ++ +L
Sbjct: 1626 TRNIVHSNLSSPDGIAVDWVANNIYWTNTGNKVIEVAKIDGSNRKTIVSTNLQ 1678
>gi|297688812|ref|XP_002821884.1| PREDICTED: low-density lipoprotein receptor-related protein 4
[Pongo abelii]
Length = 1986
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/395 (32%), Positives = 181/395 (45%), Gaps = 78/395 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 435 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHT 494
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 495 GYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYELRPDRRSCKALG-PEPV 553
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVE-------------GLAYDWIGGHIY 164
L+ +NR I + HR++ ++ GLA DW+ +Y
Sbjct: 554 LLFANRIDI------RQVLPHRSEYTLLLNNLENXXXXXXFGCCFSPGGLAVDWVHDKLY 607
Query: 165 WLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGM 224
W DS +RIEV + +G +R VL N+ +PR + L P GT ++WTDWG PRIE M
Sbjct: 608 WTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIALHPMEGT--IYWTDWGNTPRIEASSM 665
Query: 225 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYW 284
DGS R I T ++WPNGLT+D A RR+Y+ D+K I+
Sbjct: 666 DGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIE--------------------- 704
Query: 285 IDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWG 344
+AN+DGS+ ++S L A+ + LY WTDW
Sbjct: 705 -------------RANLDGSHRKAVISQGLPHPFAITVFEDSLY-----------WTDWH 740
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
G N+ II K+++P +DI T
Sbjct: 741 TKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 770
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1393 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1452
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1453 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1502
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1503 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1562
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1563 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1618
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1619 --------------------------------RIESADLNGKLRQVLVS-HVSHPFALTQ 1645
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1646 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1676
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 141/326 (43%), Gaps = 91/326 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----------- 126
G C+ +C + +Y C+C G+ + +HTC FL+ + R I
Sbjct: 788 GGCTHLCLPSGQNYTCACPTGF-RKISSHTCA--QSLDKFLLFARRMDIRRISFDTEDLS 844
Query: 127 ----------------------------LVADLEEKGK-DHRAQDIVV-SGLDLVEGLAY 156
+ D + K D Q++VV + L+ GLA
Sbjct: 845 DDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAI 904
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR ++++P G +++WTDWG +
Sbjct: 905 DWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGG--YMYWTDWGAS 962
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD S R IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 963 PKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF------- 1010
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
A +DGS +L+ QL L L +Y
Sbjct: 1011 ----------------------AGLDGSKRKVLIGSQLPHPFGLTLYGERIY-------- 1040
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G +R T+
Sbjct: 1041 ---WTDWQTKSIQSADRLTGLDRETL 1063
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 129/248 (52%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L +D TC PG S + +
Sbjct: 1087 CAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCS-------PGMNSFLIFARRID 1139
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S H I A+L+ G H
Sbjct: 1140 IRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHRISRANLD--GSQH- 1196
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
++I+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1197 -ENIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1255
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D A+ ++ +AD+
Sbjct: 1256 YHEMG--FMYWTDWGENAKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHT 1313
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1314 ERIEAADL 1321
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1426 GKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1481
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1482 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1537
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1538 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1588
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1589 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1634
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 106/222 (47%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D RI R +DGS II+T + +GL
Sbjct: 1153 VVVPINITMKNTIAIGVDPQEGKVYWSD-STLHRISRANLDGSQHENIITTGLQTTDGLA 1211
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1212 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1237
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+
Sbjct: 1238 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRAVLIN 1288
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1289 NNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1330
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 79/147 (53%), Gaps = 17/147 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ KLYW D G + +I AN+DG++ +L+ L + A+AL G +Y
Sbjct: 602 VHDKLYWTDSGTS----RIEVANLDGAHRKVLLWQNLEKPRAIALHPMEGTIY------- 650
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K I+
Sbjct: 651 ----WTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERA 706
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGDN 422
N DG+ R+ VI L F + D+
Sbjct: 707 NLDGSHRKAVISQGLPHPFAITVFEDS 733
>gi|270005136|gb|EFA01584.1| hypothetical protein TcasGA2_TC007146 [Tribolium castaneum]
Length = 2042
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/299 (38%), Positives = 154/299 (51%), Gaps = 43/299 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGAL-CTCPPGEILSN 63
C++ VCDGK DCP G DE GC K C+ C T G C C PG +++
Sbjct: 534 CISRKHVCDGKKDCPKGEDES-GCPTKRECEKHTNCTQLCITTVDGRKGCDCIPGYKIAS 592
Query: 64 DSVTCQDMNEC--EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL--- 118
D +TC+D+NEC CSQ C NT+GS+ C C GYVL D TCKAI L
Sbjct: 593 DGITCEDINECLYATDPVCSQTCNNTQGSFRCGCMTGYVLRPDLRTCKAIGDPPTLLFAN 652
Query: 119 ----------------IISNRHSILVADLEEKGK-----------DHRA-------QDIV 144
I+ H+ + D K RA DI+
Sbjct: 653 RIDIRQVSLSNAKYTPILKGLHNAIALDYHYDKKLIFWSDVSMDVIRRATMNGTEITDII 712
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
GL G+A DWI I+W DS RIEV +G +R ++A ++I +PR + + PG
Sbjct: 713 KWGLQSPGGVALDWIHDLIFWTDSGTRRIEVASLDGKHRAIIAGNDIDKPRAITV--HPG 770
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
++FWTDWG NP+IER MDGSNR +II+ ++WPNGLTLD + R+Y+AD+K + I+
Sbjct: 771 EAYVFWTDWGPNPKIERAEMDGSNRRSIINESVFWPNGLTLDYTSNRIYWADAKHNVIE 829
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 148/357 (41%), Gaps = 104/357 (29%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE----- 132
G C+ +C + SY C C G L+ D +C+ LI + + + + L+
Sbjct: 913 GGCAHLCLPNRKSYTCVCRMGQKLKSDKKSCQK---PEKLLIFARKKDLRIKHLDNNAVH 969
Query: 133 -------------------------------EKGKDHRA-------QDIVVSGLDLVEGL 154
E+ +RA + IV S + GL
Sbjct: 970 QHSLVIPLDGVKSAVAIAWDSESDYIFWTDVERDTINRALWNGSNQEVIVYSNIVTPAGL 1029
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DW+ IYW D+ RIEV NG R +L DN+ +PR +++DP G +++W+DW
Sbjct: 1030 ALDWLTNKIYWTDADTTRIEVAKTNGEMRSLLVWDNLYKPRDIVVDPIGG--YMYWSDWA 1087
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
E P+IER MDG+ RS I+S+ + WPNGL +D + ++Y+AD I+C
Sbjct: 1088 ETPKIERAAMDGTMRSVIVSSNLTWPNGLAIDHSAGKIYWADGGTKAIEC---------- 1137
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG-QLYEALALDL-ENGMLYYSTL 332
+N DGS ++ G +L LD+ EN
Sbjct: 1138 ------------------------SNFDGSKRKTIIEGPELPHPFGLDVFEN-------- 1165
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
+++WTDW IER + T++++ I D+ RV+ + K+
Sbjct: 1166 ----YIYWTDW-RTLTIERANKNTGLNRTVLASDI-------TDLMDVRVFHRNRKM 1210
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 110/233 (47%), Gaps = 46/233 (19%)
Query: 78 GYCSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI--------LV 128
G C+ +C K ++ C+C G LE D TC N FLI+++R+ I +
Sbjct: 1220 GGCTHLCLLKPKNNHTCACPTGIKLEEDGKTCA--NGPINFLILAHRNVIRQISLDVPYI 1277
Query: 129 AD--------------------------------LEEKGKD-HRAQDIVVSGLDLVEGLA 155
AD +++ +D ++ I++ L EG+A
Sbjct: 1278 ADVVLPLPPLKLVTSVDVDRKTGEIYWIDQAEDVIQKSTRDGQNSKLIIMHKLQTPEGIA 1337
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
D G IYW D N +EV + +G+NR VL N+ PR + L G +FW+DWG+
Sbjct: 1338 VDSTGRKIYWTDGERNSVEVAELDGSNRKVLFSTNLDNPRAITLHYHHGL--MFWSDWGK 1395
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
+IE MDG+ R +I+ + WPNGL +D T R+Y+ D+KL I+ L+
Sbjct: 1396 KAKIEVAQMDGTKRKALITDGLVWPNGLAIDRPTERLYWNDAKLHTIESSDLK 1448
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 99/194 (51%), Gaps = 19/194 (9%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++IV S L +G+A DW+ +IYW ++ IEV +G+NR + N+ PR + +
Sbjct: 1628 RNIVHSNLSSPDGIAVDWVANNIYWTNTGNKVIEVAKIDGSNRKTIVSTNLQDPRSIAVF 1687
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL- 259
P G +L+WTDWG+ P+IER +DGS R +I+ ++ +P GL +D +R+Y+ D+ L
Sbjct: 1688 PRKG--YLYWTDWGK-PKIERSFLDGSGRRILINEQLSFPIGLAIDFVDKRLYWIDATLN 1744
Query: 260 -DFIDCKSLEIKTNV----------NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
+ I+ L + V + + +YW D V + +A+ +
Sbjct: 1745 EERIETSDLHGRNRVVLDIPQTHPFSLTQFGEHIYWTD----WVHKTVARADKTSGKDVV 1800
Query: 309 LVSGQLYEALALDL 322
+V L A+ + +
Sbjct: 1801 IVRSYLEAAMGVTM 1814
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 46/203 (22%)
Query: 206 RWLFWTDWGENPRIERIGM-DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
R +++TD G N I+ + M + S+ I+ + + P+G+ +D +Y+ ++
Sbjct: 1604 RLIYYTDIGNN-VIQSVNMFNLSDTRNIVHSNLSSPDGIAVDWVANNIYWTNT------- 1655
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
GN V I A +DGSN +VS L + ++
Sbjct: 1656 ------------------------GNKV---IEVAKIDGSNRKTIVSTNLQDPRSI---- 1684
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384
+ +L+WTDWG+ P+IER +DGS R +I+ ++ +P GL +D +R+Y+
Sbjct: 1685 -----AVFPRKGYLYWTDWGK-PKIERSFLDGSGRRILINEQLSFPIGLAIDFVDKRLYW 1738
Query: 385 ADSKLDFIDFCNYDGTGRQQVIL 407
D+ L+ D GR +V+L
Sbjct: 1739 IDATLNEERIETSDLHGRNRVVL 1761
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 56/293 (19%), Positives = 121/293 (41%), Gaps = 41/293 (13%)
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
+ + ++ GL GLA D +YW D++L+ IE D G +R ++ + P G++
Sbjct: 1408 KRKALITDGLVWPNGLAIDRPTERLYWNDAKLHTIESSDLKGHDRKIIVTE-APHPYGLV 1466
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
+ ++WTDW +G++++ I +GL + + A++
Sbjct: 1467 V----VGNHIYWTDWQTQALHRADKTNGTDKAKIREKL----DGLMDVRSVQSDNIAENA 1518
Query: 259 LDFID--CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN---MDGSNASILVSGQ 313
+ C L ++ + +S +K+ KAN + ++ L+
Sbjct: 1519 CGGNNGGCSHLCLRNSGGFSC-----------ACPTGIKMSKANPKVCEKQPSTYLLLAT 1567
Query: 314 LYEALALDLENGMLYYSTLKC--------------TRWLFWTDWGENPRIERIGM-DGSN 358
+ + L+ L+ TL R +++TD G N I+ + M + S+
Sbjct: 1568 RFALNRISLDTDDLWDVTLPIEDVNNVIDVDFHWEKRLIYYTDIGNN-VIQSVNMFNLSD 1626
Query: 359 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
I+ + + P+G+ +D +Y+ ++ I+ DG+ R+ ++ +L
Sbjct: 1627 TRNIVHSNLSSPDGIAVDWVANNIYWTNTGNKVIEVAKIDGSNRKTIVSTNLQ 1679
>gi|156407460|ref|XP_001641562.1| predicted protein [Nematostella vectensis]
gi|156228701|gb|EDO49499.1| predicted protein [Nematostella vectensis]
Length = 770
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/300 (38%), Positives = 161/300 (53%), Gaps = 47/300 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
RC+ L++VCDG DC + DEG C +CK K CS C TP G C C PG +S
Sbjct: 293 RCIPLSRVCDGTNDCGDNYDEGSHCLDLDCKKKN--CSQRCVQTPRGGECRCFPGYTISK 350
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN- 122
D +TC+D+NEC G C C NT GSY C+C+EGYVLE HTCK + +LI SN
Sbjct: 351 DLITCKDINECSSIGRCDHFCYNTPGSYKCACDEGYVLERP-HTCKPVGPYKPWLIFSNC 409
Query: 123 -----------RHSILVAD-----------LEEK------------------GKDHRAQD 142
++ +L+ + LE+K A
Sbjct: 410 KDIRQVSLDGTQYDLLIRNLTRAISVDFDWLEKKVYWTDVRENAIYRQNYTWASSSFATT 469
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ +GL + GLA DW+G ++Y+++S + RI V +G+ R L ++++PRG+ +DP
Sbjct: 470 VIRTGLAMPVGLAVDWVGRNLYFVESSVRRIYVSKLDGSMRTSLITTDLSKPRGIAVDPR 529
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDW E RIER MDGS+R + T +YW N LTLD + VY+ ++ LD+I
Sbjct: 530 VG--YLFWTDW-EAHRIERANMDGSSRVILAKTNVYWANTLTLDYTLQTVYWVEAHLDYI 586
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 20/121 (16%)
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWL----FWTDWGENP--RI 349
I + ++DG+ +L+ L A+++D + WL +WTD EN R
Sbjct: 412 IRQVSLDGTQYDLLIR-NLTRAISVDFD-------------WLEKKVYWTDVRENAIYRQ 457
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
S +T+I T + P GL +D R +YF +S + I DG+ R +I D
Sbjct: 458 NYTWASSSFATTVIRTGLAMPVGLAVDWVGRNLYFVESSVRRIYVSKLDGSMRTSLITTD 517
Query: 410 L 410
L
Sbjct: 518 L 518
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALC 53
++CV L+ CDG+ DC G + GC+ C + LC N+ H P LC
Sbjct: 92 NQCVPLSWKCDGEKDCRPGGFDEEGCEPVTCASTYFLCPNSSHCIPRRWLC 142
>gi|347967332|ref|XP_003436050.1| AGAP002186-PB [Anopheles gambiae str. PEST]
gi|333466345|gb|EGK96211.1| AGAP002186-PB [Anopheles gambiae str. PEST]
Length = 894
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 114/303 (37%), Positives = 154/303 (50%), Gaps = 53/303 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADE-GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L KVCD DCP DE C EC G CS C TP G C C PG L+
Sbjct: 345 CIPLAKVCDQNPDCPEFQDEPADKCGKNECLQGNGGCSQLCVDTPAGFYCDCKPGFKLA- 403
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC D++ECE+PG CSQ C N G++ C C + Y+ + +HT A L+ + R
Sbjct: 404 DNRTCVDIDECEEPGSCSQSCINEIGTFKCECMDNYLRDPRDHTRCKPKEGHASLLFARR 463
Query: 124 HSILVADLEEKGKDHRAQDIVV------SGLDLV-------------------------- 151
H I L DHR +V + LD V
Sbjct: 464 HDIRKISL-----DHREMTSIVNDTKSATALDFVFRTGMIYWSDVSEKRIYKAPIDEGSD 518
Query: 152 ------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+GLA DWI HIY+ D + + IE+ + +G VL +D++ PR + L
Sbjct: 519 KTVVVKDQLVTSDGLAVDWIYNHIYFTDIKKSTIELTNFDGNMGKVLIQDDLEIPRAIAL 578
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G W++WTDWG NPRIER GMDG++R I+S ++ WPNG+TLD+ +RVY+ D+KL
Sbjct: 579 DPIDG--WMYWTDWGTNPRIERAGMDGTHRQVIVSYEVKWPNGITLDLVRKRVYWVDAKL 636
Query: 260 DFI 262
+ I
Sbjct: 637 NVI 639
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 24/137 (17%)
Query: 307 SILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD-GSNRSTIIST 365
SI+ + AL GM+Y W+D E RI + +D GS+++ ++
Sbjct: 478 SIVNDTKSATALDFVFRTGMIY-----------WSDVSEK-RIYKAPIDEGSDKTVVVKD 525
Query: 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVP 425
++ +GL +D +YF D K I+ N+DG + +I DL +
Sbjct: 526 QLVTSDGLAVDWIYNHIYFTDIKKSTIELTNFDGNMGKVLIQDDLEIPR----------- 574
Query: 426 ALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 575 AIALDPIDGWMYWTDWG 591
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 131 LEEKGKDHRAQDIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLA 187
+E G D + ++VS + G+ D + +YW+D++LN I C+ +G+ R I+ +
Sbjct: 596 IERAGMDGTHRQVIVSYEVKWPNGITLDLVRKRVYWVDAKLNVISSCNYDGSKRSVILYS 655
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW 213
D + P + + +++WTDW
Sbjct: 656 ADYLRHPFSI----TTFEDYVYWTDW 677
>gi|301772508|ref|XP_002921699.1| PREDICTED: low-density lipoprotein receptor-related protein 4-like
[Ailuropoda melanoleuca]
Length = 1934
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 131/420 (31%), Positives = 189/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 352 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGVVQCTCHT 411
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D CQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 412 GYRLTEDGHMCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALG-PEPV 470
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 471 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 530
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 531 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 590
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A R+Y+ D+K
Sbjct: 591 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGHRMYWVDAKH 648
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 649 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 674
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 675 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 718
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C+CP G L D TC E G ++ +T
Sbjct: 1341 KCGSRNGGCSHLCLPRPSGFSCSCPTGIQLKRDGKTCDPSPETYLLFSSRGSIRRISLDT 1400
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1401 SDHTDVHIPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1450
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1451 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1510
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1511 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1566
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G LVS + AL
Sbjct: 1567 --------------------------------RIESADLNGKLRQALVS-HVSHPFALTQ 1593
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1594 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1624
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/248 (36%), Positives = 129/248 (52%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L D TC PG S + +
Sbjct: 1035 CARENGGCSHLCLRSPNPSGFSCTCPTGINLMPDGKTCS-------PGMNSFLIFARRID 1087
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S HSI A+L+ G H
Sbjct: 1088 IRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHSISRANLD--GSQH- 1144
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1145 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1203
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +IS + WPNGLT+D A+ ++ +AD+
Sbjct: 1204 YHEMG--FMYWTDWGENAKLERSGMDGSDRTVLISNNLGWPNGLTVDKASSQLLWADAHT 1261
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1262 ERIEAADL 1269
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 48/227 (21%)
Query: 137 DHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D Q++VV + L+ GLA DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR
Sbjct: 832 DGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPR 891
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
++++P G +++WTDWG +P+IER GMD S R IIS+ + WPNGL +D ++R+Y+A
Sbjct: 892 DIVVEPMGG--YMYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWA 949
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ + K++E A +DGS +L+ QL
Sbjct: 950 DAGM-----KTIEF-----------------------------ACLDGSKRKVLIGSQLP 975
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
L L +Y WTDW + G +R T+
Sbjct: 976 HPFGLTLYGERIY-----------WTDWQTKSIQSADRLTGLDRETL 1011
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1374 GKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHIPVPELNNVISLDYDSVDGKVY 1429
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1430 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1485
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1486 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1536
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1537 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQALV 1582
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 138/344 (40%), Gaps = 94/344 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G C+ +C + +Y C+C G+ + +H C FL+ + R I + +
Sbjct: 736 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTED-- 790
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
D V+ D+ +A DW DSR + +
Sbjct: 791 --LSDDVIPLADVRSAVALDW--------DSRDDHV------------------------ 816
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+WTD + I R DG+ + ++ T + P GL +D T
Sbjct: 817 -----------YWTDVSTD-TISRAKWDGTGQEVVVDTSLESPAGLAIDWVTN------- 857
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KLYW D G + +I AN DGS ++L+ L
Sbjct: 858 -----------------------KLYWTDAGTD----RIEVANTDGSMRTVLIWENLDRP 890
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
+ +E Y ++WTDWG +P+IER GMD S R IIS+ + WPNGL +D
Sbjct: 891 RDIVVEPMGGY---------MYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDY 941
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++R+Y+AD+ + I+F DG+ R+ +I L F L G+
Sbjct: 942 GSQRLYWADAGMKTIEFACLDGSKRKVLIGSQLPHPFGLTLYGE 985
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D I R +DGS II+T + +GL
Sbjct: 1101 VVVPINITMKNTIAIGVDPQEGKVYWSD-STLHSISRANLDGSQHEDIITTGLQTTDGLA 1159
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1160 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1185
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +IS
Sbjct: 1186 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRTVLIS 1236
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1237 NNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGASRHTLV 1278
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 131 LEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + +++S L GLA D+ +YW D+ + IE +G+ R VL
Sbjct: 913 IERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFACLDGSKRKVLIGS 972
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI 232
+ P G+ L G R ++WTDW + G +R T+
Sbjct: 973 QLPHPFGLTL---YGER-IYWTDWQTKSIQSADRLTGLDRETL 1011
>gi|3449306|dbj|BAA32468.1| MEGF7 [Homo sapiens]
Length = 1576
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 130/413 (31%), Positives = 187/413 (45%), Gaps = 97/413 (23%)
Query: 11 VCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
+C+G DC + +DE P + C G C+ C CTC G L+ D
Sbjct: 1 LCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHTGYRLTED 60
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR- 123
TCQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+ L+ +NR
Sbjct: 61 GHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYELRPDRRSCKALG-PEPVLLFANRI 119
Query: 124 -----------HSILVADLEEKGK---DHR-----------------------AQDIVVS 146
+++L+ +LE HR +++V +
Sbjct: 120 DIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST 179
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTR 206
GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L P GT
Sbjct: 180 GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIALHPMEGT- 238
Query: 207 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKS 266
++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K I+
Sbjct: 239 -IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIE--- 294
Query: 267 LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGM 326
+AN+DGS+ ++S L A+ +
Sbjct: 295 -------------------------------RANLDGSHRKAVISQGLPHPFAITVFEDS 323
Query: 327 LYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
LY WTDW G N+ II K+++P +DI T
Sbjct: 324 LY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 360
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 983 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1042
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1043 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1092
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1093 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1152
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1153 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1208
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LV G + AL
Sbjct: 1209 --------------------------------RIESADLNGKLRQVLV-GHVSHPFALTQ 1235
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1236 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1266
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 129/248 (52%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L +D TC PG S + +
Sbjct: 677 CAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCS-------PGMNSFLIFARRID 729
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S H I A+L+ G H
Sbjct: 730 IRMVSLDIPYFADVVVPINITMKNTIAVGVDPQEGKVYWSDSTLHRISRANLD--GSQH- 786
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 787 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 845
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D A+ ++ +AD+
Sbjct: 846 YHEMG--FMYWTDWGENAKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHT 903
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 904 ERIEAADL 911
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 140/326 (42%), Gaps = 91/326 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----------- 126
G C+ +C + +Y C+C G+ + +H C FL+ + R I
Sbjct: 378 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTEDLS 434
Query: 127 ----------------------------LVADLEEKGK-DHRAQDIVV-SGLDLVEGLAY 156
+ D + K D Q++VV + L+ GLA
Sbjct: 435 DDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAI 494
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR ++++P G +++WTDWG +
Sbjct: 495 DWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGG--YMYWTDWGAS 552
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD S R IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 553 PKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF------- 600
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
A +DGS +L+ QL L L +Y
Sbjct: 601 ----------------------AGLDGSKRKVLIGSQLPHPFGLTLYGERIY-------- 630
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G +R T+
Sbjct: 631 ---WTDWQTKSIQSADRLTGLDRETL 653
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR--RVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1016 GKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1071
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1072 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1127
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1128 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1178
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1179 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1224
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 137/331 (41%), Gaps = 94/331 (28%)
Query: 78 GYCSQMCTNTK--GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G CS +C + + C+C G L D TC +S FLI + R
Sbjct: 682 GGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCSPGMNS--FLIFARR------------ 727
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
DI + LD+ Y+ D V+ NIT
Sbjct: 728 -----IDIRMVSLDIP------------YFAD-----------------VVVPINITMKN 753
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ + P ++W+D RI R +DGS II+T + +GL +D
Sbjct: 754 TIAVGVDPQEGKVYWSD-STLHRISRANLDGSQHEDIITTGLQTTDGLAVD--------- 803
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
I RK+YW D G N +I N+DGS +LV L
Sbjct: 804 ---------------------AIGRKVYWTDTGTN----RIEVGNLDGSMRKVLVWQNLD 838
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+
Sbjct: 839 SPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRAVLINNNLGWPNGLTV 889
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 890 DKASSQLLWADAHTERIEAADLNGANRHTLV 920
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 118/304 (38%), Gaps = 53/304 (17%)
Query: 129 ADLEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
A LE G D + ++++ L GL D + W D+ RIE D NG NR L
Sbjct: 861 AKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 920
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P G+ L S +++WTDW + I R D S +I + P + +
Sbjct: 921 SP-VQHPYGLTLLDS----YIYWTDW-QTRSIHR--ADKGTGSNVILVRSNLPGLMDMQA 972
Query: 248 ATRRVYFADSKLDFIDCKS-----------------------LEIKTNVNYSTIFRKLYW 284
R L F C S +++K + + Y
Sbjct: 973 VDRA-----QPLGFNKCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYL 1027
Query: 285 IDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTD 342
+ G +I D ++ + V +L ++LD + +G +YY+ +
Sbjct: 1028 L-FSSRGSIRRISLDTSDHTDVHVPVP-ELNNVISLDYDSVDGKVYYTDVFLD------- 1078
Query: 343 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
I R ++GSN T+I + +GL +D R +Y+ D+ + I+ DG+ R
Sbjct: 1079 -----VIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCR 1133
Query: 403 QQVI 406
+ +I
Sbjct: 1134 KVLI 1137
>gi|347967334|ref|XP_307995.5| AGAP002186-PA [Anopheles gambiae str. PEST]
gi|333466344|gb|EAA03795.5| AGAP002186-PA [Anopheles gambiae str. PEST]
Length = 1083
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 114/303 (37%), Positives = 154/303 (50%), Gaps = 53/303 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADE-GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L KVCD DCP DE C EC G CS C TP G C C PG L+
Sbjct: 345 CIPLAKVCDQNPDCPEFQDEPADKCGKNECLQGNGGCSQLCVDTPAGFYCDCKPGFKLA- 403
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC D++ECE+PG CSQ C N G++ C C + Y+ + +HT A L+ + R
Sbjct: 404 DNRTCVDIDECEEPGSCSQSCINEIGTFKCECMDNYLRDPRDHTRCKPKEGHASLLFARR 463
Query: 124 HSILVADLEEKGKDHRAQDIVV------SGLDLV-------------------------- 151
H I L DHR +V + LD V
Sbjct: 464 HDIRKISL-----DHREMTSIVNDTKSATALDFVFRTGMIYWSDVSEKRIYKAPIDEGSD 518
Query: 152 ------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+GLA DWI HIY+ D + + IE+ + +G VL +D++ PR + L
Sbjct: 519 KTVVVKDQLVTSDGLAVDWIYNHIYFTDIKKSTIELTNFDGNMGKVLIQDDLEIPRAIAL 578
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G W++WTDWG NPRIER GMDG++R I+S ++ WPNG+TLD+ +RVY+ D+KL
Sbjct: 579 DPIDG--WMYWTDWGTNPRIERAGMDGTHRQVIVSYEVKWPNGITLDLVRKRVYWVDAKL 636
Query: 260 DFI 262
+ I
Sbjct: 637 NVI 639
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 24/137 (17%)
Query: 307 SILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD-GSNRSTIIST 365
SI+ + AL GM+Y W+D E RI + +D GS+++ ++
Sbjct: 478 SIVNDTKSATALDFVFRTGMIY-----------WSDVSEK-RIYKAPIDEGSDKTVVVKD 525
Query: 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVP 425
++ +GL +D +YF D K I+ N+DG + +I DL +
Sbjct: 526 QLVTSDGLAVDWIYNHIYFTDIKKSTIELTNFDGNMGKVLIQDDLEIPR----------- 574
Query: 426 ALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 575 AIALDPIDGWMYWTDWG 591
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 131 LEEKGKDHRAQDIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLA 187
+E G D + ++VS + G+ D + +YW+D++LN I C+ +G+ R I+ +
Sbjct: 596 IERAGMDGTHRQVIVSYEVKWPNGITLDLVRKRVYWVDAKLNVISSCNYDGSKRSVILYS 655
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW 213
D + P + + +++WTDW
Sbjct: 656 ADYLRHPFSI----TTFEDYVYWTDW 677
>gi|194908372|ref|XP_001981759.1| GG12224 [Drosophila erecta]
gi|190656397|gb|EDV53629.1| GG12224 [Drosophila erecta]
Length = 1079
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 120/336 (35%), Positives = 167/336 (49%), Gaps = 57/336 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ KVCD + DCPNG DE G C + EC K G C + C +G C C G L
Sbjct: 543 CIANAKVCDRRKDCPNGEDEPAGKCGINECSLKNGGCMHRCVNLEVGYRCECNEGYKLDA 602
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D TC D++EC+ PG CSQ+C N G++ C C GY+ NHT CKA A L+++
Sbjct: 603 DQHTCVDIDECQTPGICSQVCVNEIGAFKCECEAGYMRILKNHTRCKA-GEGHASLLLAR 661
Query: 123 RHSILVADLEEKG-------------------------KDHRAQDIVVSGLD-------- 149
RH I L+ D Q I + +D
Sbjct: 662 RHDIRKIALDRPEMTSIVNSTKSATALDFVFRTGMIFWSDVTTQKIYKAPIDEGNDKTVV 721
Query: 150 ------LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+GLA DWI H+Y+ D+ IE+ + G+ VL KD++ PR + LDP
Sbjct: 722 LTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSIALDPIE 781
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G W++W+DWG +PRIER GMDGS+R+ II+ + WPNG+TLD+ +R+Y+ D KL+ I
Sbjct: 782 G--WMYWSDWGASPRIERAGMDGSHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTIS 839
Query: 264 CKSLE--IKTNVNYSTIFRK-----------LYWID 286
+ + + V YST + K +YW D
Sbjct: 840 SANYDGSQRQQVLYSTDYLKHPFSITTFEDYVYWTD 875
>gi|110764237|ref|XP_395858.3| PREDICTED: low-density lipoprotein receptor [Apis mellifera]
Length = 613
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 154/299 (51%), Gaps = 45/299 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++L+ VC+ DC DE C + EC G CS C P+G C C G L
Sbjct: 58 CISLSSVCNKNRDCIGWEDENEKLCGVNECLKNNGGCSQICIDLPIGFRCDCSVGYRLI- 116
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D+ TC D++EC +PG CSQ C N KGS+ CSC GY+ + NHT CKA A+ L+ +
Sbjct: 117 DNRTCDDIDECLEPGTCSQFCLNEKGSFKCSCAAGYLKDPSNHTRCKAAEGHAS-LLFTR 175
Query: 123 RHSILVADLEEKGKDHRAQD---------------------------------------I 143
RH I L+ +D +
Sbjct: 176 RHDIRKVALDRLEMTSIVKDTKMAAALDFVFRTGMIFWSDSSEKKIYKAPIDEGNERTVV 235
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ GL +GLA DWI HIYW DS+ N IE+ + G R L +D+I +PR + L+P
Sbjct: 236 IDDGLTTSDGLAVDWIYSHIYWTDSKKNTIELANFEGNMRKTLIQDHIQEPRAIALNPLE 295
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G W+FWTDW + RIE+ GMDGS+R+ I++ + WPNGLTLD+ +++Y+ D+KL I
Sbjct: 296 G--WMFWTDWSDEARIEKAGMDGSHRTVIVNNDVQWPNGLTLDLIGKKIYWVDAKLYII 352
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 306 ASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD-GSNRSTIIS 364
SI+ ++ AL GM+ FW+D E +I + +D G+ R+ +I
Sbjct: 190 TSIVKDTKMAAALDFVFRTGMI-----------FWSDSSEK-KIYKAPIDEGNERTVVID 237
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ +GL +D +Y+ DSK + I+ N++G R+ +I
Sbjct: 238 DGLTTSDGLAVDWIYSHIYWTDSKKNTIELANFEGNMRKTLI 279
>gi|281340480|gb|EFB16064.1| hypothetical protein PANDA_010586 [Ailuropoda melanoleuca]
Length = 1888
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 131/420 (31%), Positives = 189/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 306 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGVVQCTCHT 365
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D CQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 366 GYRLTEDGHMCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALG-PEPV 424
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 425 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 484
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 485 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 544
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A R+Y+ D+K
Sbjct: 545 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGHRMYWVDAKH 602
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 603 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 628
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 629 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 672
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C+CP G L D TC E G ++ +T
Sbjct: 1295 KCGSRNGGCSHLCLPRPSGFSCSCPTGIQLKRDGKTCDPSPETYLLFSSRGSIRRISLDT 1354
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1355 SDHTDVHIPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1404
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1405 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1464
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1465 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1520
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G LVS + AL
Sbjct: 1521 --------------------------------RIESADLNGKLRQALVS-HVSHPFALTQ 1547
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1548 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1578
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/248 (36%), Positives = 129/248 (52%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L D TC PG S + +
Sbjct: 989 CARENGGCSHLCLRSPNPSGFSCTCPTGINLMPDGKTCS-------PGMNSFLIFARRID 1041
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S HSI A+L+ G H
Sbjct: 1042 IRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHSISRANLD--GSQH- 1098
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1099 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1157
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +IS + WPNGLT+D A+ ++ +AD+
Sbjct: 1158 YHEMG--FMYWTDWGENAKLERSGMDGSDRTVLISNNLGWPNGLTVDKASSQLLWADAHT 1215
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1216 ERIEAADL 1223
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 48/227 (21%)
Query: 137 DHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D Q++VV + L+ GLA DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR
Sbjct: 786 DGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPR 845
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
++++P G +++WTDWG +P+IER GMD S R IIS+ + WPNGL +D ++R+Y+A
Sbjct: 846 DIVVEPMGG--YMYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWA 903
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ + K++E A +DGS +L+ QL
Sbjct: 904 DAGM-----KTIEF-----------------------------ACLDGSKRKVLIGSQLP 929
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
L L +Y WTDW + G +R T+
Sbjct: 930 HPFGLTLYGERIY-----------WTDWQTKSIQSADRLTGLDRETL 965
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1328 GKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHIPVPELNNVISLDYDSVDGKVY 1383
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1384 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1439
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1440 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1490
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1491 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQALV 1536
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 138/344 (40%), Gaps = 94/344 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G C+ +C + +Y C+C G+ + +H C FL+ + R I + +
Sbjct: 690 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTED-- 744
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
D V+ D+ +A DW DSR + +
Sbjct: 745 --LSDDVIPLADVRSAVALDW--------DSRDDHV------------------------ 770
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+WTD + I R DG+ + ++ T + P GL +D T
Sbjct: 771 -----------YWTDVSTD-TISRAKWDGTGQEVVVDTSLESPAGLAIDWVTN------- 811
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KLYW D G + +I AN DGS ++L+ L
Sbjct: 812 -----------------------KLYWTDAGTD----RIEVANTDGSMRTVLIWENLDRP 844
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
+ +E Y ++WTDWG +P+IER GMD S R IIS+ + WPNGL +D
Sbjct: 845 RDIVVEPMGGY---------MYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDY 895
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++R+Y+AD+ + I+F DG+ R+ +I L F L G+
Sbjct: 896 GSQRLYWADAGMKTIEFACLDGSKRKVLIGSQLPHPFGLTLYGE 939
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D I R +DGS II+T + +GL
Sbjct: 1055 VVVPINITMKNTIAIGVDPQEGKVYWSD-STLHSISRANLDGSQHEDIITTGLQTTDGLA 1113
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1114 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1139
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +IS
Sbjct: 1140 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRTVLIS 1190
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1191 NNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGASRHTLV 1232
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 131 LEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + +++S L GLA D+ +YW D+ + IE +G+ R VL
Sbjct: 867 IERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFACLDGSKRKVLIGS 926
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI 232
+ P G+ L G R ++WTDW + G +R T+
Sbjct: 927 QLPHPFGLTL---YGER-IYWTDWQTKSIQSADRLTGLDRETL 965
>gi|74796184|sp|Q6X0I2.1|VGR_SOLIN RecName: Full=Vitellogenin receptor; Short=SiVgR; Flags: Precursor
gi|42521628|gb|AAP92450.1| vitellogenin receptor [Solenopsis invicta]
Length = 1782
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 121/341 (35%), Positives = 165/341 (48%), Gaps = 58/341 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
RC++L VCD K DC +G+DEGPGC C C + CH TP G++CTC PG L
Sbjct: 180 RCISLKVVCDKKDDCGDGSDEGPGCTQFNCSS--AGCQSNCHQTPKGSVCTCKPGYKLQK 237
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC D++EC+ G C Q C N GSY C+C Y LE D TCKA A L+ S R
Sbjct: 238 DNRTCNDIDECQAYGICDQDCMNVPGSYACTCQREYYLENDKRTCKA-RAGEATLVFSTR 296
Query: 124 HSILV------------------------------ADLEEKG-------KDHRAQD---- 142
SIL ++LEE G + + Q
Sbjct: 297 TSILGMHVDSEKFFSLATNLNHAVGVAMYGDYVYWSNLEENGYNTIVKKRTYHPQAPNEV 356
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
IV +GL L+ G+ DWI +IY+ D + I VC +GT VL KD +P G+ L P+
Sbjct: 357 IVTTGLALITGIDVDWITKNIYFADEDNHCIGVCTNDGTYCTVLIKD-TDKPTGVALLPT 415
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G ++W+DWG P I GMDG N ++ K+ WP +T+D R+Y+ D+K I
Sbjct: 416 QGK--MYWSDWGTFPHIAVAGMDGKNVRIFVNVKLEWPKSVTIDYPNERLYWVDAKSKMI 473
Query: 263 DCKSLE-----------IKTNVNYSTIFRKLYWIDEGGNGV 292
+ L+ I+ + + KLYW D NG+
Sbjct: 474 ESVRLDGTDRRIVLHDIIQEPFSMTVFQNKLYWSDWESNGI 514
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 173/369 (46%), Gaps = 84/369 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ +KVCDG DCP+G+DE C A + F C C+ TP GA+C C G L+ D
Sbjct: 1236 CLPYSKVCDGNRDCPDGSDETGKCQTACTVNNF--CKGMCYKTPAGAVCGCQSGYRLAVD 1293
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS--- 121
++C+D+NECE CSQMC NT GSY C C + +++ D +CKA+ + F+ ++
Sbjct: 1294 MISCEDINECEL-DICSQMCRNTIGSYECFCKDEFIIRNDKTSCKAVGPAMEFITVTDND 1352
Query: 122 ------NRHS----------ILVADLEE-----------------KGKDHRAQDIV-VSG 147
N HS + V+ L+ K + R +IV V
Sbjct: 1353 IRKMTHNLHSTTQLLFPLMGVRVSGLDVNAVSDSVYWSNDEFGTIKKLNIRTNEIVTVKI 1412
Query: 148 LDLVEGLAYDWIGGHIYWLD-SRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGT 205
++ + LA DWI G++Y D S LN I+VC+ E G ++ + + +++D
Sbjct: 1413 VEHPQALAVDWITGNVYVNDNSHLNTIKVCNLEKGKCATLVKIQDKMKVASVIVDSI--N 1470
Query: 206 RWLFWTDW---GENP--RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
RWLFW + ++P +I R M G++ II++ + + G+T+D ++Y++D D
Sbjct: 1471 RWLFWAEISLEADHPTSKICRTDMTGADMK-IIASDLGFVRGMTIDHVKSKLYWSD---D 1526
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
F Y T + +N DGS ++++ + AL++
Sbjct: 1527 F-------------YKT------------------VESSNFDGSQRKVVLTLNMNHALSI 1555
Query: 321 DLENGMLYY 329
+ LY+
Sbjct: 1556 SIFEQSLYF 1564
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 173/427 (40%), Gaps = 87/427 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLA--------ECKHKFGLCSNTCHPTPLGALCT- 54
RC+ VCD DC + +DE CD + EC +F TC P +C
Sbjct: 1190 RCIPELWVCDKANDCGDNSDE-KNCDGSKRNFIESNECD-EFKCSVGTC--LPYSKVCDG 1245
Query: 55 ---CPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI 111
CP G S+++ CQ C +C MC T +C C GY L D +C+ I
Sbjct: 1246 NRDCPDG---SDETGKCQ--TACTVNNFCKGMCYKTPAGAVCGCQSGYRLAVDMISCEDI 1300
Query: 112 NHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN 171
N I S + E KD + ++ + + +G + ++ N
Sbjct: 1301 NE-CELDICSQMCRNTIGSYECFCKD----EFIIRN----DKTSCKAVGPAMEFITVTDN 1351
Query: 172 RIEVCDEN--GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
I N T +++ + R LD + + ++W++ E I+++ +
Sbjct: 1352 DIRKMTHNLHSTTQLLFP---LMGVRVSGLDVNAVSDSVYWSN-DEFGTIKKLNI---RT 1404
Query: 230 STIISTKIY-WPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
+ I++ KI P L +D T VY D N + +TI K+ +++G
Sbjct: 1405 NEIVTVKIVEHPQALAVDWITGNVYVND---------------NSHLNTI--KVCNLEKG 1447
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDW---GE 345
+KI + V+ + +++ RWLFW + +
Sbjct: 1448 KCATLVKI--------QDKMKVASVIVDSI----------------NRWLFWAEISLEAD 1483
Query: 346 NP--RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403
+P +I R M G++ II++ + + G+T+D ++Y++D ++ N+DG+ R+
Sbjct: 1484 HPTSKICRTDMTGADMK-IIASDLGFVRGMTIDHVKSKLYWSDDFYKTVESSNFDGSQRK 1542
Query: 404 QVILIDL 410
V+ +++
Sbjct: 1543 VVLTLNM 1549
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 163/452 (36%), Gaps = 101/452 (22%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGP---------GCDLAECKHKFGLC------------ 40
D C+ CDGK DCP DE CD C + +C
Sbjct: 1151 TDICLPKNVRCDGKNDCPQSDDEQNCTYCFENEFACDNKRCIPELWVCDKANDCGDNSDE 1210
Query: 41 ------------SNTCHP--------TPLGALC----TCPPGEILSNDSVTCQDMNECEQ 76
SN C P +C CP G S+++ CQ C
Sbjct: 1211 KNCDGSKRNFIESNECDEFKCSVGTCLPYSKVCDGNRDCPDG---SDETGKCQ--TACTV 1265
Query: 77 PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
+C MC T +C C GY L D +C+ IN I S + E K
Sbjct: 1266 NNFCKGMCYKTPAGAVCGCQSGYRLAVDMISCEDINE-CELDICSQMCRNTIGSYECFCK 1324
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDEN--GTNRIVLAKDNITQP 194
D + ++ + + +G + ++ N I N T +++ +
Sbjct: 1325 D----EFIIRN----DKTSCKAVGPAMEFITVTDNDIRKMTHNLHSTTQLLFP---LMGV 1373
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY-WPNGLTLDIATRRVY 253
R LD + + ++W++ E I+++ + + I++ KI P L +D T VY
Sbjct: 1374 RVSGLDVNAVSDSVYWSN-DEFGTIKKLNI---RTNEIVTVKIVEHPQALAVDWITGNVY 1429
Query: 254 FAD-SKLDFIDCKSLE-------IK-------TNVNYSTIFRKLYW--IDEGGNGVPLKI 296
D S L+ I +LE +K +V +I R L+W I + KI
Sbjct: 1430 VNDNSHLNTIKVCNLEKGKCATLVKIQDKMKVASVIVDSINRWLFWAEISLEADHPTSKI 1489
Query: 297 GKANMDGSNASILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
+ +M G++ I+ S + +D LY W+D +E D
Sbjct: 1490 CRTDMTGADMKIIASDLGFVRGMTIDHVKSKLY-----------WSD-DFYKTVESSNFD 1537
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADS 387
GS R +++ + + L++ I + +YF S
Sbjct: 1538 GSQRKVVLTLNM--NHALSISIFEQSLYFLSS 1567
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 32 ECKHKFGLCSNTCHPTPLGA-LCTCPPGEILSNDSVTCQDMNECEQPGY-CSQ 82
+C+ G CS+ C P+ + + +C CPPG LSND+ TC +EC + Y CS+
Sbjct: 889 DCQKNNGNCSHVCLPSLITSFICACPPGMELSNDNRTCISHHECSKNEYKCSE 941
>gi|195504251|ref|XP_002099000.1| GE10672 [Drosophila yakuba]
gi|194185101|gb|EDW98712.1| GE10672 [Drosophila yakuba]
Length = 1060
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 118/336 (35%), Positives = 166/336 (49%), Gaps = 57/336 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ KVCD + DCPNG DE G C + EC K G C + C +G C C G L
Sbjct: 527 CIPNAKVCDRRKDCPNGEDEPAGKCGINECSTKNGGCMHQCVNLAVGYRCECHDGYKLDA 586
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D TC D++EC+ PG CSQ+C N G++ C C GY+ NHT CKA + A L+++
Sbjct: 587 DQHTCVDIDECQTPGICSQVCVNEIGAFKCECEAGYMRVLKNHTRCKA-SEGHASLLLAR 645
Query: 123 RHSILVADLEEKGKDHRAQDI-VVSGLDLV------------------------------ 151
RH I L+ + LD V
Sbjct: 646 RHDIRKIALDRPEMTSIVNSTKAATALDFVFRTGMIFWSDVTTKSIYKAPIDEGNEKTVV 705
Query: 152 --------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+GLA DWI H+Y+ D+ IE+ + G+ VL KD++ PR + LDP
Sbjct: 706 LTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSIALDPIE 765
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G W++W+DWG +PRIER GMDGS+R+ II+ + WPNG+TLD+ +R+Y+ D KL+ I
Sbjct: 766 G--WMYWSDWGASPRIERAGMDGSHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNSIS 823
Query: 264 CKSLE--IKTNVNYSTIFRK-----------LYWID 286
+ + + V YS+ + K +YW D
Sbjct: 824 SSNYDGSQRQQVLYSSEYLKHPFSITTFEDYVYWTD 859
>gi|157131891|ref|XP_001662359.1| low-density lipoprotein receptor (ldl) [Aedes aegypti]
gi|108871366|gb|EAT35591.1| AAEL012251-PA, partial [Aedes aegypti]
Length = 774
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 158/304 (51%), Gaps = 55/304 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADE-GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L+KVCD K DCP DE C EC G CS+ C TP G C C PG L N
Sbjct: 185 CIPLSKVCDKKPDCPEFQDEPNDKCGKNECLENNGGCSHLCVDTPAGFYCDCKPGYKLVN 244
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
+ TC+D++EC + G CSQ CTN G++ C C GY+ + +HT CKA A+ L+ +
Sbjct: 245 NR-TCEDIDECAEAGSCSQKCTNEIGTFKCECMPGYLRDPRDHTKCKATEGHAS-LLFAR 302
Query: 123 RHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------- 151
RH I L DHR +V + LD V
Sbjct: 303 RHDIRKISL-----DHREMTSIVNDTKSATALDFVFRTGMIYWSDVSEQRIYKAPIDEGS 357
Query: 152 -------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
+GLA DWI HIY+ D + IE+ + +G +L KD++ PR +
Sbjct: 358 DKTVVVKDQTVTSDGLAVDWIYNHIYFTDIKKATIELTNFDGNMGKILIKDDLEIPRAIA 417
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
LDP G W++WTDWG PRIER GMDG++R I++ ++ WPNG+TLD+ +RVY+ D+K
Sbjct: 418 LDPIDG--WMYWTDWGTTPRIERAGMDGTHRQVIVTYEVKWPNGITLDLVRKRVYWVDAK 475
Query: 259 LDFI 262
L+ I
Sbjct: 476 LNTI 479
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 131 LEEKGKD--HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL-- 186
+E G D HR Q IV + G+ D + +YW+D++LN I CD +G+ R V+
Sbjct: 436 IERAGMDGTHR-QVIVTYEVKWPNGITLDLVRKRVYWVDAKLNTISSCDYDGSKRTVVLY 494
Query: 187 AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ D + P + +++WTDW + + +G + + + +
Sbjct: 495 SADYLRHPFSITT----FEDYVYWTDWDKEAVFKASKFNGKDIEPVTAMHM 541
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 24/139 (17%)
Query: 306 ASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD-GSNRSTIIS 364
SI+ + AL GM+Y W+D E RI + +D GS+++ ++
Sbjct: 317 TSIVNDTKSATALDFVFRTGMIY-----------WSDVSEQ-RIYKAPIDEGSDKTVVVK 364
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGV 424
+ +GL +D +YF D K I+ N+DG + +I DL +
Sbjct: 365 DQTVTSDGLAVDWIYNHIYFTDIKKATIELTNFDGNMGKILIKDDLEIPR---------- 414
Query: 425 PALALDLENGMLYYSTEGA 443
A+ALD +G +Y++ G
Sbjct: 415 -AIALDPIDGWMYWTDWGT 432
>gi|347466437|gb|AEO97327.1| low density lipoprotein receptor [Oncorhynchus clarkii]
Length = 875
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 177/365 (48%), Gaps = 65/365 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + KVC+GK DC + +DE C EC G CS+TC +G C+CP G L
Sbjct: 292 ECITVDKVCNGKKDCRDMSDEPIRECGNNECLTNNGGCSHTCTDLKIGFNCSCPAGYSLG 351
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D+ C+D++EC P C+Q+C N GSY C C EGY L+ TCKA + +L+ +N
Sbjct: 352 KDNRKCEDIDECADPDTCTQICVNILGSYKCECEEGYELDPKTKTCKAATGTVPYLLFTN 411
Query: 123 RH------------------------------------------SILVADLEEKGKDHRA 140
RH I AD+ G
Sbjct: 412 RHEVRKMTLDRSEYVPLIPRLKNVVALDMDMPGHKIFWSDLYHRKIYSADMNLAGNSSHH 471
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++ S +++ E LA DWI G+IYW DS L I V +GT R L + + +PR +++D
Sbjct: 472 NVVIDSQMEVPECLAVDWIHGNIYWTDSVLQTISVATTDGTRRKTLISEGLEKPRSIVVD 531
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ +++WTDWG+ +IE+ G++G++R +++ I WPNG TLD+ +R+Y+ DSK+
Sbjct: 532 PA--NNFMYWTDWGDEAKIEKSGLNGADRVALVTDNIKWPNGTTLDMVNQRLYWVDSKMH 589
Query: 261 FIDCKSLEIKTNVNYSTIF---------------RKLYWIDEGGNGVPLKIGKANMDGSN 305
+ S+ + ++ I+ K++W D G V + + G++
Sbjct: 590 TL--SSIGVNGEGRHTLIYNEDKLAHPLSLAVFEEKVFWTDMGDRAV---MSANRLTGND 644
Query: 306 ASILV 310
++L
Sbjct: 645 ITVLA 649
>gi|380011543|ref|XP_003689861.1| PREDICTED: very low-density lipoprotein receptor-like [Apis florea]
Length = 891
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/299 (37%), Positives = 154/299 (51%), Gaps = 45/299 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++L+ VC+ DC N DE C + EC G CS C P+G C C G L
Sbjct: 336 CISLSSVCNKNRDCINWEDENEKLCGVNECLKNNGGCSQICIDLPIGFRCDCSAGYRLI- 394
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D+ TC D++EC +PG CSQ C N KGS+ CSC GY+ + NHT CKA A+ L+ +
Sbjct: 395 DNRTCDDIDECLEPGTCSQFCLNEKGSFKCSCAAGYLKDPSNHTRCKAAEGHAS-LLFTR 453
Query: 123 RHSILVADLEEKGKDHRAQD---------------------------------------I 143
RH I L+ +D +
Sbjct: 454 RHDIRKVALDRLEMTSIVKDTKMAAALDFVFRTGMIFWSDSSEKKIYKAPIDEGNERTVV 513
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ GL +GLA DWI HIYW DS+ N IE+ + G R L +D+I +PR + L+P
Sbjct: 514 IDDGLTTSDGLAVDWIYSHIYWTDSKKNTIELANFEGNMRKTLIQDHIQEPRAIALNPLE 573
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G W+FWTDW + RIE+ GMDGS+R+ I+ + WPNGLTLD+ +++Y+ D+KL I
Sbjct: 574 G--WMFWTDWSDEARIEKAGMDGSHRTVIVDNDVQWPNGLTLDLIGKKIYWVDAKLYII 630
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 11/101 (10%)
Query: 306 ASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
SI+ ++ AL GM+ FW+D E + +G+ R+ +I
Sbjct: 468 TSIVKDTKMAAALDFVFRTGMI-----------FWSDSSEKKIYKAPIDEGNERTVVIDD 516
Query: 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ +GL +D +Y+ DSK + I+ N++G R+ +I
Sbjct: 517 GLTTSDGLAVDWIYSHIYWTDSKKNTIELANFEGNMRKTLI 557
>gi|157115039|ref|XP_001652530.1| low-density lipoprotein receptor (ldl) [Aedes aegypti]
gi|108877064|gb|EAT41289.1| AAEL007041-PA [Aedes aegypti]
Length = 4649
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/423 (30%), Positives = 186/423 (43%), Gaps = 92/423 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ + ++CDG+ DCP+ DEG C C CS+TCH P G +C+CP L +
Sbjct: 1153 CIKVDQLCDGRMDCPDNTDEGFRCKDQLCDKTTRECSHTCHNAPEGFVCSCPEHLYLQPN 1212
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
C+ + CE G CSQ+CT Y CSC EGY L +D TC++ N A +I SNR
Sbjct: 1213 LKDCKVDHACEHWGTCSQVCTPDGKHYKCSCKEGYTLTFDKFTCRSNNPDAPHVIFSNRQ 1272
Query: 125 SILVADLEEKGKDH-------------------------------------------RAQ 141
I DL + +
Sbjct: 1273 EIRGVDLNTLAVKNFYTSLRNTIALDFLWGNESVQIFWTDVIDDKIFRGTLTGDSLSNVE 1332
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V SGL EGLA DWIG ++YW+DS L++IEV NG R L ++ PR + LDP
Sbjct: 1333 AVVQSGLSTAEGLAVDWIGMNLYWIDSNLDQIEVAKTNGNYRRTLVAGDMVNPRAIALDP 1392
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTI--ISTKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW E PR+ER M G +R+TI + + WPNG+TLD +RVY+ D++
Sbjct: 1393 MEGL--LFWTDWEEGAPRLERCTMAGEDRTTIKYVGSDGGWPNGITLDYVLKRVYWIDAR 1450
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I +NY+ + L D+ P I L++
Sbjct: 1451 SDSIH--------TINYNGLDHHLVIKDQEVLSHPFSI----------------TLFD-- 1484
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 378
+++WTDW N I +G++ T+I P G+ + +
Sbjct: 1485 -----------------NYVYWTDWRTNSVIRANKWNGTD-VTVIQRTQSQPFGIQILHS 1526
Query: 379 TRR 381
+R+
Sbjct: 1527 SRQ 1529
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 168/340 (49%), Gaps = 64/340 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EILSN 63
C+ +CDG+ DC + +DE C + EC LC++ C +G CTC PG ++
Sbjct: 2917 CITSGLLCDGQNDCGDWSDE-KSCQINECDQMPDLCAHACEDREVGYECTCRPGFKVNVI 2975
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
+ C D++EC ++P CSQ+CTNT GSY CSC EGYV +N +CKA + LI SN
Sbjct: 2976 NKHLCDDVDECLDRP--CSQICTNTYGSYHCSCQEGYV-SRENGSCKADSLETMKLIFSN 3032
Query: 123 RHSILVADL---------------------EEKG------------------KDHRAQDI 143
R+ + DL E K ++ + +
Sbjct: 3033 RYYVREVDLNGSMTILAHNLSNAVALDFDWETKCYYWSDVNSVISSIKRMCLSSNKTETL 3092
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
S L +GLA DW+ ++YW D L+ IE+ +G R +L +N+ +PR ++LDP
Sbjct: 3093 HKSTLKNPDGLAIDWVARNLYWCDKSLDTIEISKLDGRYRKILISENLQEPRAIVLDPF- 3151
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
R ++WTDWG+ P I + GMDGSN++ +I + WPN LT+ T +++ D++ DFI
Sbjct: 3152 -RRNMYWTDWGDQPYIGKAGMDGSNQTMLIKNHLGWPNALTISFETNELFWGDAREDFIA 3210
Query: 264 CKSLE-----------IKTNVNYSTIFR------KLYWID 286
LE + ++N +F ++YW D
Sbjct: 3211 VSDLEGRNRKVIIYRDMHPSMNLHHVFAIAVWEDRIYWTD 3250
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 149/314 (47%), Gaps = 62/314 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C+++ K CDG DC N P + +EC CS C TP G C C G
Sbjct: 128 KCLDIEKFCDGVWDCTNDELRCPKNNASECAKL--QCSFDCRQTPNGPKCFCAKGS--QP 183
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN------HSAAF 117
+ C+D +EC+ G C Q C N GSY C+C GY DN C AIN S F
Sbjct: 184 NGSLCEDFDECQIEGICDQTCKNLPGSYKCTCASGYA-RIDN-KCLAINTPKEEPMSLLF 241
Query: 118 L--------------IISNRHS----ILVADLEEKGKDHRAQDIVV-------------- 145
+++N HS + + ++ HR + I +
Sbjct: 242 ATSADVQKFPVINGSVVTNEHSPSIKLPLNNIRALEMYHRNRTICLIRSATTTRFECYNV 301
Query: 146 ---------------SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
+D V+ ++ DWI G+ Y+LD + I VC + + ++ +++
Sbjct: 302 DNVTHTWEMPLPDLFPNIDSVDQVSIDWISGNWYFLDDQREIIFVCSASMQHCSIVLEND 361
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
+ +PRGM LDP+ G +LF+T WG++ +ER +DGSNR++I+ KI +P+G+ LD+A
Sbjct: 362 LMKPRGMALDPTVG--FLFFTKWGKSLASVERSFLDGSNRTSIVLKKIVYPHGVALDLAL 419
Query: 250 RRVYFADSKLDFID 263
+ Y+ D+ LD I+
Sbjct: 420 QHTYWVDTYLDSIE 433
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 84/152 (55%), Gaps = 18/152 (11%)
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI--VLAKDNITQPRGMMLDPSPGTRWLF 209
+GLAYDWIG ++++ +S I V + G+ RI V+ +D + +P+ + LDP G ++
Sbjct: 642 DGLAYDWIGNNLFYTNSERGHITVL-KLGSKRIAHVVLRD-LMRPQSIALDPKKGV--MY 697
Query: 210 WTDWG-ENPRIERIGMDGSNRSTIISTKI---YWPNGLTLDIATRRVYFADSKLDFIDCK 265
W+ W +N +IE MDG+ R T++ ++ WP+GL LD +R+Y+ DS+ I+
Sbjct: 698 WSSWAPDNAKIEWSWMDGNRRDTLVDGRLRPMIWPSGLVLDQIQKRLYWCDSRTGLIESV 757
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
+L+ R L + GN P+ IG
Sbjct: 758 TLDGHD--------RTLLYDGMAGNHYPVTIG 781
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 113/321 (35%), Gaps = 105/321 (32%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK--- 134
G C +C IC+C+ G V D TC+ + + +S SI + D + +
Sbjct: 2167 GGCEHLCLFNGTHPICACSHGKVSTKDYKTCEPYDSFLIYSRVSAIESIHLTDSQNRNGP 2226
Query: 135 -----------------------------------------GKDHRAQDIVVSGLDLVEG 153
G DHR +++ VEG
Sbjct: 2227 IPEIQNSTLLKNTIALTYDYDQSLIYYSDVEFSSINSVYFNGSDHRQ---IITKQLTVEG 2283
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDEN----------GTNRIVLAKDNITQPRGMMLDPSP 203
LAY+ I H++W + I D + G + ++ +PRG+ ++P
Sbjct: 2284 LAYNPITKHLFWTSNNEASIRSLDMSNITHDPKTNAGLVKELIKLKPTDKPRGIAVEPCL 2343
Query: 204 GTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
++WT+W + I+R G +II+T I PN +TLD +++Y+AD++ D
Sbjct: 2344 AM--IYWTNWNPLSASIQRAYPSGYGLESIITTDIRMPNAITLDYQAKKLYWADARYD-- 2399
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
KI +A+ DG N +L A
Sbjct: 2400 --------------------------------KIERADYDGRNRVVLAHSTPKHPFA--- 2424
Query: 323 ENGMLYYSTLKCTRWLFWTDW 343
M Y L LFWTDW
Sbjct: 2425 ---MAVYGDL-----LFWTDW 2437
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 154/360 (42%), Gaps = 63/360 (17%)
Query: 110 AINHSAA----FLIISNRHSI--LVADLEEKGKDHRAQDIVVSG--LDLVEGLAYDWIGG 161
AI++ A+ F+ S+R SI + D E+ + VV G LD + G+A DW+
Sbjct: 1930 AIDYHASSDFVFIADSDRGSITKIKRDGSERSVIVSNFEQVVDGNSLDWLGGIAVDWVAN 1989
Query: 162 HIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIER 221
+IYW D + N IEV +G R V+A N+ P+ + +DP G ++F+ G +I R
Sbjct: 1990 NIYWTDQKRNLIEVARLDGFMRYVVAS-NLESPQLIAVDPVNG--YIFYAGKG---KIGR 2043
Query: 222 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI-------DCKSLEIKT--- 271
G+DG+ + +++ + LTLDI + VY+ + + D I + K + +
Sbjct: 2044 TGLDGTGKFILVNQTAIISD-LTLDIENQVVYWCEVQTDSIWRVDYDGNMKKVLLNNTLD 2102
Query: 272 NVNYSTIFRK-LYWIDEGGN-------------------GVPLK----IGKANMDGSNAS 307
NV ++ + ++W D GN G P+K +NA
Sbjct: 2103 NVQALDLYEENIFWSDVRGNIKVANVKNITNFWSVIEADGNPMKDIKIFSSKKQQTTNAC 2162
Query: 308 ILVSGQLYEALALDLENGMLYYSTLK--------CTRWLFWTDWGENPRIERIGM-DGSN 358
+ +G + + + S K C + + + IE I + D N
Sbjct: 2163 GMNNGGCEHLCLFNGTHPICACSHGKVSTKDYKTCEPYDSFLIYSRVSAIESIHLTDSQN 2222
Query: 359 RSTII-----STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
R+ I ST + LT D +Y++D + I+ ++G+ +Q+I L VE
Sbjct: 2223 RNGPIPEIQNSTLLKNTIALTYDYDQSLIYYSDVEFSSINSVYFNGSDHRQIITKQLTVE 2282
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLK---CTRWLFWTDWGEN-PRIERIGMDG 356
+D I V + ++ LEN ++ + +LF+T WG++ +ER +DG
Sbjct: 337 LDDQREIIFVCSASMQHCSIVLENDLMKPRGMALDPTVGFLFFTKWGKSLASVERSFLDG 396
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
SNR++I+ KI +P+G+ LD+A + Y+ D+ LD I+ +YDG R
Sbjct: 397 SNRTSIVLKKIVYPHGVALDLALQHTYWVDTYLDSIERVDYDGNNR 442
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 158/418 (37%), Gaps = 101/418 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGAL-CT----CPPGE 59
C+ VCD K DC + +DE ++ CH P G C+ C P
Sbjct: 3708 CIRKGLVCDNKDDCGDNSDEK---------------TSMCHKCPAGTFRCSSDSKCIPSS 3752
Query: 60 ILSNDSVTCQDMNE---CEQP----GYCSQMCTNTKGSYICSCNEGYVL-EYDNHTCKAI 111
+ C D ++ C + G CSQ+C KG Y C C GY N TC A
Sbjct: 3753 FRCDGQANCIDESDELGCVRMDCGFGSCSQICLVKKGYYNCQCAAGYRKGPLRNDTCVAA 3812
Query: 112 NHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN 171
+ L+ S D R+ + +G + G++ +++
Sbjct: 3813 DEPGLLLVSSE-------------SDFRS---------IYQGTT---VMGYLQTTSKKID 3847
Query: 172 RIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR-- 229
R + + K NIT LFW D E ++++ MD S +
Sbjct: 3848 RFDY---------SITKHNIT---------------LFWIDSLEKC-LQKVHMDTSVKVE 3882
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
T+ + P L + + S + D K + + ++ T LY I++
Sbjct: 3883 ETVEFSHSVRPRALPSSDRVKTLDGTHSTVILKDQKVIPLAIACDWLT--EHLYVINKKQ 3940
Query: 290 NGVPLKIGKANMDGSNASIL-VSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ + + N +G+N + L +G+ + +D N ++ +S ++
Sbjct: 3941 SNIFV----INFNGTNQTTLTATGKHPIDIVVDPINRVMVWSVME--------------A 3982
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I GMDG + ++S I W +GL +D T R+Y+AD + I+ C G + VI
Sbjct: 3983 IILSGMDGYKKQKLVSANIEWASGLAIDQTTNRLYWADYRKSTIETCLLMTGGDRHVI 4040
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 9/158 (5%)
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV-PLKIGKANMDGSNASILV 310
VYF S I K L ++ + Y+ I + L+W + L + D + LV
Sbjct: 2264 VYFNGSDHRQIITKQLTVE-GLAYNPITKHLFWTSNNEASIRSLDMSNITHDPKTNAGLV 2322
Query: 311 SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYW 369
+L + D G+ + C ++WT+W + I+R G +II+T I
Sbjct: 2323 K-ELIKLKPTDKPRGI---AVEPCLAMIYWTNWNPLSASIQRAYPSGYGLESIITTDIRM 2378
Query: 370 PNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
PN +TLD +++Y+AD++ D I+ +YD GR +V+L
Sbjct: 2379 PNAITLDYQAKKLYWADARYDKIERADYD--GRNRVVL 2414
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 20/135 (14%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y E G+ LK+G + L+ Q ++ALD + G++Y W+
Sbjct: 654 FYTNSERGHITVLKLGSKRIAHVVLRDLMRPQ---SIALDPKKGVMY-----------WS 699
Query: 342 DWG-ENPRIERIGMDGSNRSTIISTKI---YWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
W +N +IE MDG+ R T++ ++ WP+GL LD +R+Y+ DS+ I+
Sbjct: 700 SWAPDNAKIEWSWMDGNRRDTLVDGRLRPMIWPSGLVLDQIQKRLYWCDSRTGLIESVTL 759
Query: 398 DGTGRQQVILIDLMV 412
DG R +L D M
Sbjct: 760 DGHDR--TLLYDGMA 772
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 85/195 (43%), Gaps = 32/195 (16%)
Query: 218 RIERIGMDGSNRSTIIS----TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE----- 268
I + + N TI + T++ P L DI+ R+++ D +L+ I L
Sbjct: 1588 EIRGVDLQQPNHYTIPTISHQTQVVQPAVLDYDISEGRLFWNDIQLNEIKSSDLATGPIE 1647
Query: 269 --IKTNVNYSTIF-----RKLYWIDEGGNGVPLKIGKANMDGSNAS-ILVSGQLYEALAL 320
+ T+V++S F KL +I G +I NM G + IL L +L +
Sbjct: 1648 TILDTDVSHSMGFAVDWISKLLFISTGTE-TSSRILACNMKGEYITEILTDLSLVNSLVV 1706
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERI---GMDGSNRSTIISTKIYWPNGLTLDI 377
G+LY++T E+P++ + MDGS R I ++ Y L LD
Sbjct: 1707 HPSKGVLYFATT-----------NESPKLYEMYSSRMDGSERRLISNSTFYPMESLVLDF 1755
Query: 378 ATRRVYFADSKLDFI 392
AT R+Y+ SKL I
Sbjct: 1756 ATERLYYITSKLGEI 1770
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 19/162 (11%)
Query: 153 GLAYDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
G A DWI ++ +RI C+ G + D ++ +++ PS G L++
Sbjct: 1659 GFAVDWISKLLFISTGTETSSRILACNMKGEYITEILTD-LSLVNSLVVHPSKGV--LYF 1715
Query: 211 TDWGENPRIERI---GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD---FIDC 264
E+P++ + MDGS R I ++ Y L LD AT R+Y+ SKL + D
Sbjct: 1716 ATTNESPKLYEMYSSRMDGSERRLISNSTFYPMESLVLDFATERLYYITSKLGEIYYYDI 1775
Query: 265 KSLEI--------KTNVNYSTIFRKLYWIDEGGNGVPLKIGK 298
+S +I ++ I+R+ + D+G + ++ K
Sbjct: 1776 ESGKITEVLGAIGSHPISTMAIYREHIYFDDGYDSRIVRCNK 1817
>gi|432095599|gb|ELK26737.1| Low-density lipoprotein receptor-related protein 8 [Myotis davidii]
Length = 795
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 167/322 (51%), Gaps = 56/322 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K CD + DCP+G+DE GC L EC H G CS+ C+ +G CTCP G L
Sbjct: 216 CVPAVKRCDQEQDCPDGSDEA-GCLMGLNECLHNNGGCSHICNDLKVGFECTCPAGYRLL 274
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG + C C+ GY ++ CKA+ + LI +N
Sbjct: 275 -DQKTCGDIDECEDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAVAGRSPSLIFTN 333
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D Q
Sbjct: 334 RHEVRRIDLVKRDYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPAEQ 393
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++++ L EGLA DW+ HIYW DS I V +G+ R L ++++PR + +D
Sbjct: 394 EVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGSRRRTLFSHDLSEPRAIAVD 453
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++W+DWG +IE+ G++G++R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 454 PLRG--FMYWSDWGYQAKIEKSGLNGADRHTLVSDDIEWPNGITLDLLSQRLYWVDSKLH 511
Query: 261 FIDCKSLEIKTNVNYSTIFRKL 282
+ +++++S RK+
Sbjct: 512 QL--------SSIDFSGGHRKM 525
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 177/424 (41%), Gaps = 85/424 (20%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGC--DLAECK-HKFGLCSNTCHPTPLGALCT--- 54
+ +CV + CDG+ DC +GADE GC L C+ +F C P C
Sbjct: 171 TSHKCVPASWRCDGEKDCESGADEA-GCATSLGTCRGDEFQCGDGAC--VPAVKRCDQEQ 227
Query: 55 -CPPGEILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN 112
CP G S+++ +NEC G CS +C + K + C+C GY L D TC I+
Sbjct: 228 DCPDG---SDEAGCLMGLNECLHNNGGCSHICNDLKVGFECTCPAGYRL-LDQKTCGDID 283
Query: 113 H----SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS 168
A I N + + D + V G + I +
Sbjct: 284 ECEDPDACSQICVNYKGYFKCECHPGYE----MDTLTKNCKAVAGRSPSLI----FTNRH 335
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ RI++ + + I + K+ + LD T ++W D +I MD ++
Sbjct: 336 EVRRIDLVKRDYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKAS 388
Query: 229 ----RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYW 284
+ +I +++ P GL +D + + +YW
Sbjct: 389 DPAEQEVLIDEQLHSPEGLAVDW------------------------------VHKHIYW 418
Query: 285 IDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTD 342
D G I A +DGS L S L E A+A+D G +Y W+D
Sbjct: 419 TDSGNK----TISVATVDGSRRRTLFSHDLSEPRAIAVDPLRGFMY-----------WSD 463
Query: 343 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
WG +IE+ G++G++R T++S I WPNG+TLD+ ++R+Y+ DSKL + ++ G R
Sbjct: 464 WGYQAKIEKSGLNGADRHTLVSDDIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGHR 523
Query: 403 QQVI 406
+ +I
Sbjct: 524 KMLI 527
>gi|33356181|gb|AAQ16410.1| lipophorin receptor [Aedes aegypti]
gi|374094912|gb|AEY84776.1| lipophorin receptor [Aedes aegypti]
Length = 891
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 158/304 (51%), Gaps = 55/304 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADE-GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L+KVCD K DCP DE C EC G CS+ C TP G C C PG L N
Sbjct: 302 CIPLSKVCDKKPDCPEFQDEPNDKCGKNECLENNGGCSHLCVDTPAGFYCDCKPGYKLVN 361
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
+ TC+D++EC + G CSQ CTN G++ C C GY+ + +HT CKA A+ L+ +
Sbjct: 362 NR-TCEDIDECAEAGSCSQKCTNEIGTFKCECMPGYLRDPRDHTKCKATEGHAS-LLFAR 419
Query: 123 RHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------- 151
RH I L DHR +V + LD V
Sbjct: 420 RHDIRKISL-----DHREMTSIVNDTKSATALDFVFRTGMIYWSDVSEQRIYKAPIDEGS 474
Query: 152 -------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
+GLA DWI HIY+ D + IE+ + +G +L KD++ PR +
Sbjct: 475 DKTVVVKDQTVTSDGLAVDWIYNHIYFTDIKKATIELTNFDGNMGKILIKDDLEIPRAIA 534
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
LDP G W++WTDWG PRIER GMDG++R I++ ++ WPNG+TLD+ +RVY+ D+K
Sbjct: 535 LDPIDG--WMYWTDWGTTPRIERAGMDGTHRQVIVTYEVKWPNGITLDLVRKRVYWVDAK 592
Query: 259 LDFI 262
L+ I
Sbjct: 593 LNTI 596
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 131 LEEKGKD--HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL-- 186
+E G D HR Q IV + G+ D + +YW+D++LN I CD +G+ R V+
Sbjct: 553 IERAGMDGTHR-QVIVTYEVKWPNGITLDLVRKRVYWVDAKLNTISSCDYDGSKRTVVLY 611
Query: 187 AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ D + P + +++WTDW + + +G + + + +
Sbjct: 612 SADYLRHPFSITT----FEDYVYWTDWDKEAVFKASKFNGKDIEPVTAMHM 658
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 24/139 (17%)
Query: 306 ASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD-GSNRSTIIS 364
SI+ + AL GM+Y W+D E RI + +D GS+++ ++
Sbjct: 434 TSIVNDTKSATALDFVFRTGMIY-----------WSDVSEQ-RIYKAPIDEGSDKTVVVK 481
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGV 424
+ +GL +D +YF D K I+ N+DG + +I DL +
Sbjct: 482 DQTVTSDGLAVDWIYNHIYFTDIKKATIELTNFDGNMGKILIKDDLEIPR---------- 531
Query: 425 PALALDLENGMLYYSTEGA 443
A+ALD +G +Y++ G
Sbjct: 532 -AIALDPIDGWMYWTDWGT 549
>gi|161078651|ref|NP_001097930.1| lipophorin receptor 2, isoform G [Drosophila melanogaster]
gi|158030401|gb|ABW08770.1| lipophorin receptor 2, isoform G [Drosophila melanogaster]
Length = 1063
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 155/299 (51%), Gaps = 44/299 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ KVC+ + DCPNG DE G C + EC K G C + C +G C C G L
Sbjct: 497 CIPNAKVCNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQCVNLEVGYRCECHDGYKLGA 556
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D TC D++ECE PG CSQ+C N G++ C C GY+ NHT CKA + A L+++
Sbjct: 557 DQHTCVDIDECETPGICSQVCVNEIGAFKCECEAGYMRLLKNHTRCKA-SEGHASLLLAR 615
Query: 123 RHSILVADLEEKG-------------------------KDHRAQDIVVSGLD-------- 149
RH I L+ D Q I + +D
Sbjct: 616 RHDIRKIALDRPEMTSIVNSTKAATALDFVFRTGMIFWSDVATQSIYKAPIDEGNDRTVV 675
Query: 150 ------LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+GLA DWI H+Y+ D+ IE+ + G+ VL KD++ PR + LDP
Sbjct: 676 LTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSIALDPIE 735
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G W++W+DWG +PRIER GMDG++R+ II+ + WPNG+TLD+ +R+Y+ D KL+ I
Sbjct: 736 G--WMYWSDWGASPRIERAGMDGTHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTI 792
>gi|161078643|ref|NP_001097926.1| lipophorin receptor 2, isoform C [Drosophila melanogaster]
gi|158030397|gb|ABW08766.1| lipophorin receptor 2, isoform C [Drosophila melanogaster]
Length = 1029
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 155/299 (51%), Gaps = 44/299 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ KVC+ + DCPNG DE G C + EC K G C + C +G C C G L
Sbjct: 498 CIPNAKVCNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQCVNLEVGYRCECHDGYKLGA 557
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D TC D++ECE PG CSQ+C N G++ C C GY+ NHT CKA + A L+++
Sbjct: 558 DQHTCVDIDECETPGICSQVCVNEIGAFKCECEAGYMRLLKNHTRCKA-SEGHASLLLAR 616
Query: 123 RHSILVADLEEKG-------------------------KDHRAQDIVVSGLD-------- 149
RH I L+ D Q I + +D
Sbjct: 617 RHDIRKIALDRPEMTSIVNSTKAATALDFVFRTGMIFWSDVATQSIYKAPIDEGNDRTVV 676
Query: 150 ------LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+GLA DWI H+Y+ D+ IE+ + G+ VL KD++ PR + LDP
Sbjct: 677 LTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSIALDPIE 736
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G W++W+DWG +PRIER GMDG++R+ II+ + WPNG+TLD+ +R+Y+ D KL+ I
Sbjct: 737 G--WMYWSDWGASPRIERAGMDGTHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTI 793
>gi|328702065|ref|XP_001946912.2| PREDICTED: low-density lipoprotein receptor-related protein 1-like
[Acyrthosiphon pisum]
Length = 2150
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/352 (35%), Positives = 174/352 (49%), Gaps = 68/352 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+++ +C+GK DC +G+DEG C EC+ CS+ C +P G +C CPP IL ND
Sbjct: 1173 CISVDMLCNGKNDCLDGSDEGGQCASNECELSSD-CSHICQNSPDGYICLCPPNMILQND 1231
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSY--ICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
+ TC ++ C G CSQ C G Y C+CNEGY+L D+ TCK+I+ + +I SN
Sbjct: 1232 NTTCSVVSPCSTWGRCSQKCMKL-GHYGHKCTCNEGYLLATDHFTCKSIDTNIPQIIFSN 1290
Query: 123 RHSILVADLEEKGKD--------------HRAQD-------------------------- 142
+H + DL + + A+D
Sbjct: 1291 KHELRGIDLVTRNVKSLISHLKNTVTLDFYHAKDGTDTLYWTDVMDDKIFKGKIIGGSLS 1350
Query: 143 ----IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
+V SGL EGLA DW+ G+IYW++S L++IEV NG+ R L ++ PR +
Sbjct: 1351 DIEVVVQSGLTTAEGLAVDWVAGNIYWVESNLDQIEVAKLNGSYRRTLIAGDMESPRAIA 1410
Query: 199 LDPSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIY----WPNGLTLDIATRRVY 253
LDP G +LFWTDW + PRIER M G R TI+ ++ WPNGLTLD R+Y
Sbjct: 1411 LDPRYG--YLFWTDWDSSAPRIERCSMAGEFRQTIVLVSMFSDGEWPNGLTLDYELNRIY 1468
Query: 254 FADSKLDFIDC------------KSLEIKTNVNYSTIFRK-LYWIDEGGNGV 292
+ D+K D I K E+ ++ T+F +YW D N V
Sbjct: 1469 WIDAKSDTIHTVDYNGNNHHLVLKGHELLSHSFAITLFENDVYWTDWRSNSV 1520
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 141/316 (44%), Gaps = 63/316 (19%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
+ +C + CDG + C N DEG C+ H C++ C PT G C CP G
Sbjct: 136 STQCKYIESFCDGTSHCENSTDEGRFCENMVPCHGLN-CAHGCKPTGKGPACFCPEGMQP 194
Query: 62 SNDSVTCQDMNECEQPGY-CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN---HSAAF 117
N+ C DM+ECE Y C Q+CTN KGS+ CSC GY+ N TCKAIN + A
Sbjct: 195 HNNE--CIDMDECEVLNYTCDQICTNKKGSFSCSCVPGYIQT--NSTCKAINVPENEDAS 250
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLV-------------------------- 151
+++S I L G + Q V L L
Sbjct: 251 ILVSTSKDIRRIYL--NGSSYAGQRCNVQALSLTFDHRNHTVCFVHQYNKTNGAKLSCAN 308
Query: 152 -----------------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK 188
+A DW+ + Y++D + I +C N +L
Sbjct: 309 IDNLSVSDIWDLPPPTFFPLLATTHVALDWVSRNWYYVDDDRDMIYMCTYNMKYCQILID 368
Query: 189 DNITQPRGMMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDI 247
N+ +PR + LDP+ G ++F+T WG+ P +ER + G +R +I KI +P GLT+DI
Sbjct: 369 VNLNKPRSIALDPTKG--FMFFTKWGQYPAMVERAQLSGLDRVPLIDHKIVYPYGLTVDI 426
Query: 248 ATRRVYFADSKLDFID 263
+ +Y+ D+ LDF++
Sbjct: 427 PSEHIYWVDTYLDFVE 442
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 73/126 (57%), Gaps = 14/126 (11%)
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EGLA DW G +++W D L + V ++ T + VL + + PR ++LDP G +++W
Sbjct: 646 EGLAIDWTGRNLFWTDEGLGTVNVFKIDDPTKQKVLITNRVYHPRSIVLDPKNG--FMYW 703
Query: 211 TDWGENPR--------IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+W PR IER MDG+N++T ++ + WP LTLD TR++Y++D D I
Sbjct: 704 GNW---PRGSTSTGGSIERAWMDGNNQTTFVNVDVQWPMSLTLDFFTRKLYWSDVYKDRI 760
Query: 263 DCKSLE 268
+C L+
Sbjct: 761 ECIDLD 766
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 59/223 (26%)
Query: 217 PRIERIGMDGSNRSTIISTKI---YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
P I+ I M N I + P + D+ T+ +Y++ K + I+ I+ N
Sbjct: 576 PMIKGISMISKNHKQQIILPLDEGRIPTTIDYDVKTQSIYYSGGKKNAIE----RIRLNG 631
Query: 274 NYSTIF-----------------RKLYWIDEGGNGVPLKIGKANM----DGSNASILVSG 312
+ R L+W DEG +G N+ D + +L++
Sbjct: 632 TKKELVKMLPEMNCEGLAIDWTGRNLFWTDEG-------LGTVNVFKIDDPTKQKVLITN 684
Query: 313 QLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPR--------IERIGMDGSNRSTI 362
++Y ++ LD +NG +Y WG PR IER MDG+N++T
Sbjct: 685 RVYHPRSIVLDPKNGFMY--------------WGNWPRGSTSTGGSIERAWMDGNNQTTF 730
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
++ + WP LTLD TR++Y++D D I+ + DG+ R+ +
Sbjct: 731 VNVDVQWPMSLTLDFFTRKLYWSDVYKDRIECIDLDGSNREII 773
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 7/113 (6%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA---KDNITQPRGMMLDPSPGTRW 207
V G+A DWI GHIYW + LN I+V NG+N V+ D + +P + +DP G +
Sbjct: 2018 VSGIAIDWIAGHIYWANPSLNIIQVAYLNGSNAYVVVDSGDDTMERPNSLAVDPVAG--F 2075
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIY-WPNGLTLDIATRRVYFADSKL 259
+FW+ + + R +DG N+ +I+ K + +TLD R++YF L
Sbjct: 2076 IFWS-IRRHHGVSRATLDGMNKKSILLNKDQPYVEDITLDYTNRKLYFCQQSL 2127
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 14/136 (10%)
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
T+V + R Y++D+ + + + NM I V+ ++ALD G
Sbjct: 332 THVALDWVSRNWYYVDDDRDMI--YMCTYNMKYCQILIDVNLNKPRSIALDPTKG----- 384
Query: 331 TLKCTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
++F+T WG+ P +ER + G +R +I KI +P GLT+DI + +Y+ D+ L
Sbjct: 385 ------FMFFTKWGQYPAMVERAQLSGLDRVPLIDHKIVYPYGLTVDIPSEHIYWVDTYL 438
Query: 390 DFIDFCNYDGTGRQQV 405
DF++ NYDG+ R+ +
Sbjct: 439 DFVERINYDGSNRRTI 454
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 128/322 (39%), Gaps = 64/322 (19%)
Query: 69 QDMNECEQP-----GYCSQMCT----NTKGSYICSCNEGYVLEYDNHTCKAINHS-AAFL 118
Q+ E P G C +C N + C C GY L + K I+ AFL
Sbjct: 513 QEQPEINHPCMINNGGCDHICVTAYKNKEAIAQCLCQPGYRLT----SGKCISSKLPAFL 568
Query: 119 IISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEG-----LAYDWIGGHIYWLDSRLNRI 173
I ++ + K+H+ Q I L L EG + YD IY+ + N I
Sbjct: 569 IFGKSSPPMIKGISMISKNHKQQII----LPLDEGRIPTTIDYDVKTQSIYYSGGKKNAI 624
Query: 174 EVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
E NGT + ++ G+ +D + R LFWTD G D + + +I
Sbjct: 625 ERIRLNGTKKELVKMLPEMNCEGLAIDWT--GRNLFWTDEGLGTVNVFKIDDPTKQKVLI 682
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
+ ++Y P + LD +Y+ + W G
Sbjct: 683 TNRVYHPRSIVLDPKNGFMYWGN---------------------------W-PRGSTSTG 714
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
I +A MDG+N + V+ + ++L L+ ++ TR L+W+D ++ RIE I
Sbjct: 715 GSIERAWMDGNNQTTFVNVDVQWPMSLTLD----FF-----TRKLYWSDVYKD-RIECID 764
Query: 354 MDGSNRSTIISTKIYWPNGLTL 375
+DGSNR II +P G+ +
Sbjct: 765 LDGSNRE-IIKRSTPYPYGIAI 785
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 125/322 (38%), Gaps = 55/322 (17%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GL D+ IYW+D++ + I D NG N ++ K + + ++WTD
Sbjct: 1457 GLTLDYELNRIYWIDAKSDTIHTVDYNGNNHHLVLKGHELLSHSFAITLFEND--VYWTD 1514
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR--RVYFADSKLDFIDCKSL-EI 269
W N + G N T++ + P + + +R +V F + +C L +
Sbjct: 1515 WRSNSVNKANKWTGLN-VTVVQHTVTQPFDIKILHPSRQPKVEFNPCGTNNGNCSHLCLL 1573
Query: 270 KTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG-SNASILVSGQLYEALALDLENGMLY 328
N Y + +++ K N N +L+ QL E ++LE Y
Sbjct: 1574 NINSKYKCDCPHV-----------MQLSKDNHTCIENEIVLLFAQLNEIRGVNLEQP--Y 1620
Query: 329 YST-------------------LKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYW 369
Y+T L + ++W+D+ N I+R + G N I+ T I+
Sbjct: 1621 YNTIPTLLSYDSQALLHVQIDYLAADKKIYWSDYSSN-EIKRSNLSGGNIEVILDTGIHQ 1679
Query: 370 PNGLTLDIATRRVYFADSK------------LDFIDFCNYDGTGRQQVILIDLMVEFTND 417
P+G +D ++ ++ A S I CN DG + D E TN
Sbjct: 1680 PHGFAIDWMSKNMFIAVSSDQNPLTEEKISGARTIIACNLDGEYFTTIYSSDWTDEDTNK 1739
Query: 418 LMGDNGVPALALDLENGMLYYS 439
+ + ALA+ + G L+++
Sbjct: 1740 TL---QIGALAVHPQQGKLFWT 1758
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 62/208 (29%)
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKI-------YWPNGLTLDIATRRVYFADSK 258
+++W+D E I RI DG+ R I++ + W +G+ +D +Y+A+
Sbjct: 1978 EYIYWSD-DEQGTIMRIKRDGTGRQIIVNHEHSSDTNSGAWVSGIAIDWIAGHIYWANPS 2036
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG-----Q 313
L+ I A ++GSNA ++V +
Sbjct: 2037 LNIIQV----------------------------------AYLNGSNAYVVVDSGDDTME 2062
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY-WPNG 372
+LA+D G +++S + + + R +DG N+ +I+ K +
Sbjct: 2063 RPNSLAVDPVAGFIFWSIRR------------HHGVSRATLDGMNKKSILLNKDQPYVED 2110
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGT 400
+TLD R++YF L I CNYDGT
Sbjct: 2111 ITLDYTNRKLYFCQQSL--IGRCNYDGT 2136
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 104/261 (39%), Gaps = 27/261 (10%)
Query: 78 GYCSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N Y C C L DNHTC + L+ + + I +LE+
Sbjct: 1565 GNCSHLCLLNINSKYKCDCPHVMQLSKDNHTCI---ENEIVLLFAQLNEIRGVNLEQPYY 1621
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGG--HIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
+ + L+ + D++ IYW D N I+ + +G N V+ I QP
Sbjct: 1622 NTIPTLLSYDSQALLH-VQIDYLAADKKIYWSDYSSNEIKRSNLSGGNIEVILDTGIHQP 1680
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
G +D ++ + +NP E S TII+ LD +
Sbjct: 1681 HGFAIDWMSKNMFIAVSS-DQNPLTEE---KISGARTIIA--------CNLDGEYFTTIY 1728
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
+ D K+L+I + KL+W +G + I +NM+ S+ SI+ + ++
Sbjct: 1729 SSDWTDEDTNKTLQIGA-LAVHPQQGKLFWT-QGMSSGHHNIIMSNMNASSYSIIYTEKI 1786
Query: 315 ------YEALALDLENGMLYY 329
+ +L +D E LY+
Sbjct: 1787 IPFVSGFTSLTIDQETNTLYW 1807
>gi|161078647|ref|NP_001097928.1| lipophorin receptor 2, isoform E [Drosophila melanogaster]
gi|33589552|gb|AAQ22543.1| LD11117p [Drosophila melanogaster]
gi|158030399|gb|ABW08768.1| lipophorin receptor 2, isoform E [Drosophila melanogaster]
Length = 1064
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 155/299 (51%), Gaps = 44/299 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ KVC+ + DCPNG DE G C + EC K G C + C +G C C G L
Sbjct: 498 CIPNAKVCNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQCVNLEVGYRCECHDGYKLGA 557
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D TC D++ECE PG CSQ+C N G++ C C GY+ NHT CKA + A L+++
Sbjct: 558 DQHTCVDIDECETPGICSQVCVNEIGAFKCECEAGYMRLLKNHTRCKA-SEGHASLLLAR 616
Query: 123 RHSILVADLEEKG-------------------------KDHRAQDIVVSGLD-------- 149
RH I L+ D Q I + +D
Sbjct: 617 RHDIRKIALDRPEMTSIVNSTKAATALDFVFRTGMIFWSDVATQSIYKAPIDEGNDRTVV 676
Query: 150 ------LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+GLA DWI H+Y+ D+ IE+ + G+ VL KD++ PR + LDP
Sbjct: 677 LTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSIALDPIE 736
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G W++W+DWG +PRIER GMDG++R+ II+ + WPNG+TLD+ +R+Y+ D KL+ I
Sbjct: 737 G--WMYWSDWGASPRIERAGMDGTHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTI 793
>gi|395543789|ref|XP_003773795.1| PREDICTED: low-density lipoprotein receptor-related protein 4
[Sarcophilus harrisii]
Length = 1921
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/420 (30%), Positives = 187/420 (44%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 335 RCIGQRKLCNGVNDCADNSDESPQQNCRPWTGQENCNVNNGGCAQKCQMLRGAVQCTCHT 394
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L D +C D+NEC + GYCSQ CTN+ G++ C C GY L D +CKA+
Sbjct: 395 GYRLMEDGRSCHDVNECAEEGYCSQGCTNSDGAFQCWCEAGYELRPDRRSCKALG-PEPV 453
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 454 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 513
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 514 VEEVVSTGLESPGGLAIDWLHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 573
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A R+Y+ D+K
Sbjct: 574 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGHRMYWVDAKH 631
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +A++DGSN ++S L A
Sbjct: 632 HVIE----------------------------------RADLDGSNRKAVISQGLPHPFA 657
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 658 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 701
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C K G CS+ C PTP G C CP G L D TC E G ++ +T
Sbjct: 1324 KCGPKNGGCSHLCLPTPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1383
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1384 NDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1433
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + P
Sbjct: 1434 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAAFPR 1493
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1494 KG--YLFWTDWGHLAKIERSNLDGSERKLLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1549
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1550 --------------------------------RIESADLNGKLRQVLVS-HVSHPFALTQ 1576
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1577 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1607
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 141/326 (43%), Gaps = 91/326 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----------- 126
G C+ +C + +Y C+C G+ + +HTC FL+ + R I
Sbjct: 719 GGCTHLCLPSGQNYTCACPTGF-RKTSSHTCA--QSLDKFLLFARRMDIRRISFDTEDLS 775
Query: 127 ----------------------------LVADLEEKGK-DHRAQDIVV-SGLDLVEGLAY 156
+ D + K D Q++VV + L+ GLA
Sbjct: 776 DDVIPLADVRSAVALDWDSRDDYVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAI 835
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +GT R VL +N+ +PR ++++P G +++WTDWG +
Sbjct: 836 DWVTNKLYWTDAGTDRIEVANTDGTMRTVLIWENLDRPRDIVVEPRGG--FMYWTDWGAS 893
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD S R IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 894 PKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF------- 941
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
A +DGS +L+ QL L L +Y
Sbjct: 942 ----------------------AGLDGSKRKVLIGTQLPHPFGLTLYGERIY-------- 971
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G +R T+
Sbjct: 972 ---WTDWQTKSIQSADRLTGLDRETL 994
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 134/289 (46%), Gaps = 67/289 (23%)
Query: 78 GYCSQMCTNTK--GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE--- 132
G CS +C + Y C+C G L D TC + S FLI + R I + L+
Sbjct: 1023 GGCSHLCLRSPHPKGYSCTCPTGINLLPDGKTCSSGMRS--FLIFARRIDIRMVSLDIPY 1080
Query: 133 ----------------------EKGKDH-----------------RAQDIVVSGLDLVEG 153
++GK + + +DI+ +GL +G
Sbjct: 1081 FADVVVPVNVTMKNTIAIGVDPQEGKVYWSDSTLRRISRANLDGSQHEDIITTGLQTTDG 1140
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
LA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L G+ ++WTDW
Sbjct: 1141 LAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVLYHEMGS--MYWTDW 1198
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE----- 268
GEN ++ER GMDGS+R+ +IS + WPNGLT+D A ++ +AD+ + I+ L
Sbjct: 1199 GENAKLERAGMDGSDRTVLISNNLGWPNGLTVDKAGSQLLWADAHTERIEATDLNGANRR 1258
Query: 269 -----IKTNVNYSTIFRKLYWID---------EGGNGVPLKIGKANMDG 303
++ + + +YW D + G G + + +AN+ G
Sbjct: 1259 TLVSPVQHPYGLTLLDSYIYWTDWQTRSIHRADKGTGRNVILVRANLPG 1307
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D ++ + + N ++LD + +VY
Sbjct: 1357 GKTCDPSPETYLLF----SSRGSIRRISLDTNDHTDVHVPVPELNNVISLDYDSVDGKVY 1412
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1413 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1468
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1469 LDGSCRKVLINNSLDEPRAI---------AAFPRKGYLFWTDWGHLAKIERSNLDGSERK 1519
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1520 LLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1565
>gi|161078641|ref|NP_733118.3| lipophorin receptor 2, isoform A [Drosophila melanogaster]
gi|158030396|gb|AAF56498.4| lipophorin receptor 2, isoform A [Drosophila melanogaster]
Length = 1028
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 155/299 (51%), Gaps = 44/299 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ KVC+ + DCPNG DE G C + EC K G C + C +G C C G L
Sbjct: 497 CIPNAKVCNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQCVNLEVGYRCECHDGYKLGA 556
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D TC D++ECE PG CSQ+C N G++ C C GY+ NHT CKA + A L+++
Sbjct: 557 DQHTCVDIDECETPGICSQVCVNEIGAFKCECEAGYMRLLKNHTRCKA-SEGHASLLLAR 615
Query: 123 RHSILVADLEEKG-------------------------KDHRAQDIVVSGLD-------- 149
RH I L+ D Q I + +D
Sbjct: 616 RHDIRKIALDRPEMTSIVNSTKAATALDFVFRTGMIFWSDVATQSIYKAPIDEGNDRTVV 675
Query: 150 ------LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+GLA DWI H+Y+ D+ IE+ + G+ VL KD++ PR + LDP
Sbjct: 676 LTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSIALDPIE 735
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G W++W+DWG +PRIER GMDG++R+ II+ + WPNG+TLD+ +R+Y+ D KL+ I
Sbjct: 736 G--WMYWSDWGASPRIERAGMDGTHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTI 792
>gi|348507663|ref|XP_003441375.1| PREDICTED: low-density lipoprotein receptor-related protein 1-like
[Oreochromis niloticus]
Length = 4563
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/404 (32%), Positives = 189/404 (46%), Gaps = 92/404 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CVN T +CD K DC +G+DE C + EC K CS C +G C C PG L +
Sbjct: 2922 CVNETLLCDHKDDCGDGSDE-LNCFINECLNSKLSGCSQLCEDLKIGFKCRCHPGFHLKD 2980
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D TC D++EC C+Q C NT GS+ C C EG+ L +N T CK+ + FLI +N
Sbjct: 2981 DRKTCIDIDECTTTYPCTQRCINTHGSFHCLCVEGFQLSPENPTICKSTSDEEPFLIFAN 3040
Query: 123 RHSILVADLEEKGK---------------DHRAQ-----DIVVSG--------------- 147
R+ + +L+ D+R Q D+ G
Sbjct: 3041 RYYLRKLNLDGSNYTLIKQGLNNAVALDFDYRQQMIYWTDVTTQGSMIRRMHINGSDVQV 3100
Query: 148 -----LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
L +GLA DW+GG++YW D + IEV NG R VL + +PR + +D
Sbjct: 3101 LHRTSLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVNSGLREPRALAVDVR 3160
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W+DWG++P I RIGMDG+NRS I+ KI WPNGLTLD R+Y+AD++ D+
Sbjct: 3161 YG--YLYWSDWGDSPHIGRIGMDGTNRSVIVEDKITWPNGLTLDFINDRIYWADAREDY- 3217
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
I A++DG++ +++ + A+ L
Sbjct: 3218 ---------------------------------IAFASLDGTSRHTVLAQDIPHIFAMTL 3244
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD-GSNRSTIIST 365
+++WTDW E I R G+N++ +IST
Sbjct: 3245 FE-----------EYIYWTDW-ETKSINRAHKTLGTNKTMLIST 3276
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/332 (35%), Positives = 169/332 (50%), Gaps = 62/332 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCD--LAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++++K+C+G DC +G DEGP C C H C C TP G C C G +S
Sbjct: 100 CIHMSKLCNGVPDCTDGWDEGPHCREYTTNCSHMG--CKEHCAVTPAGPACYCKTGYEIS 157
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN---HSAAFLI 119
D TC+D +EC G CSQ CTNT+GSY CSC EGY+ + DN +CKA N L+
Sbjct: 158 PDGKTCKDFDECSLYGTCSQSCTNTEGSYTCSCVEGYLSQPDNRSCKAKNVPVERLPVLL 217
Query: 120 ISNRHSILVADL------------------------EEK--------------------- 134
I+N +I L EEK
Sbjct: 218 IANSQNINATFLSGTTVNNLLSTSTKQTTAMDFLYAEEKVCWIHVGDSPSSTNLKCAFIP 277
Query: 135 ----GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
D R +I S L VE +A DW+ G+ Y++D +RI VCD+NG + L
Sbjct: 278 NLKSFTDERIINISFS-LHHVEQMAIDWLTGNFYFVDDVDDRIFVCDKNGQTCVTLLDQE 336
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P+G+ LDP+ G +F+TD+G+ P++E MDG NR+ ++ +KI +P+G+TLD+ +R
Sbjct: 337 LYNPKGIALDPTMGK--MFFTDYGQIPKVEGCDMDGHNRTKLVDSKIVFPHGITLDLVSR 394
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
VY+AD+ LD+I+ E K N TI + L
Sbjct: 395 LVYWADAYLDYIEVVDYEGK---NRHTIIQGL 423
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 150/304 (49%), Gaps = 51/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DCP+G+DE CDL C G CS+ C P G +C+CP G L
Sbjct: 1170 CLPAEKLCDGADDCPDGSDEKL-CDL--CSLDNGECSHNCTVAPGEGVICSCPLGMELGA 1226
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S ICSC +G+ LE D CK+ + F+I SNR
Sbjct: 1227 DNKTCQIQSFCAKHLKCSQRCEQNKFSVICSCYDGWELEPDKENCKSTDPFKPFIIFSNR 1286
Query: 124 HSILVADLEE-------------------------------KGKDHRAQ----------D 142
H I DL + + K +R + D
Sbjct: 1287 HEIRRIDLNKGEFSVLVPGLRNTIALDFHLNQSALYWTDVVEDKIYRGKLSENGALTSFD 1346
Query: 143 IVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V+ GL EGLA DWI G+IYW++S L++IEV +GT R L + PR + LDP
Sbjct: 1347 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMRTTLLAGEVEHPRAIALDP 1406
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIY--WPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G R TI WPNGLT+D RR+ + D++
Sbjct: 1407 RDGI--LFWTDWDASLPRIEAASMSGEGRKTIHKETGNGGWPNGLTVDYLERRILWIDAR 1464
Query: 259 LDFI 262
D I
Sbjct: 1465 SDAI 1468
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 139/327 (42%), Gaps = 73/327 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD-----LAECKHKFGLCSN----TCHPTPLGALCT 54
RC++ C+ DC + + C+ L +C+ +C + C + C+
Sbjct: 3758 RCISSVLRCNYFNDCEDYGSDEVNCNKKDTVLNDCRSNRTVCGDGDEAHCVVNGTDSFCS 3817
Query: 55 CPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHS 114
C PG S+ CQD NEC++ G CS +C NTKGSY CSC++ N TCKA
Sbjct: 3818 CKPG-FTSSGRNRCQDKNECKEFGVCSHICNNTKGSYKCSCHK--YFSRINDTCKADTQR 3874
Query: 115 AAFLIISNRH-----------------------SILVADLEEK----------------- 134
I + I DL K
Sbjct: 3875 QVLYIADDNEIRSLDPSMPNWRYEQIFQGDANVRIDAMDLHVKTNRIYWTNWHTGRISSY 3934
Query: 135 -------------GKDHRAQDIVVSGLDLVE-----GLAYDWIGGHIYWLDSRLNRIEVC 176
+D R D ++ L++ + G+A DW+ G++YW DS + IEV
Sbjct: 3935 DLPSSSSSPNSNSNRDRRQSDSRITSLEIPDLKMPRGIAVDWVAGNLYWTDSGRDVIEVA 3994
Query: 177 D-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST 235
G +R L I +P +++DP G ++W DWG +P+IE MDG+ R T++
Sbjct: 3995 QISGGRHRKTLISGMIDEPHAIVVDPQRGK--MYWADWGNHPKIETAAMDGTMRETLVEE 4052
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFI 262
I WP GL +D R+Y+AD+KL I
Sbjct: 4053 NIQWPTGLAVDYFNERLYWADAKLSVI 4079
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 195/473 (41%), Gaps = 119/473 (25%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSN---------------TCH--- 45
+C+ VCD DC +G+DE C+ C C+N CH
Sbjct: 2835 QCIPKHFVCDHDNDCSDGSDESQECEYPTCGPNEFRCANGRCLIKNSWECDGDFDCHDHS 2894
Query: 46 -PTPLGALCTCPPGE-----------------ILSNDSVTCQD--------MNEC--EQP 77
P CT P + +L + C D +NEC +
Sbjct: 2895 DEAPKNPRCTGPEKKCNDTTYICNNGNCVNETLLCDHKDDCGDGSDELNCFINECLNSKL 2954
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR--------HSILVA 129
CSQ+C + K + C C+ G+ L+ D TC I+ + R H + V
Sbjct: 2955 SGCSQLCEDLKIGFKCRCHPGFHLKDDRKTCIDIDECTTTYPCTQRCINTHGSFHCLCVE 3014
Query: 130 DLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+ ++ I S D L + + Y+L +LN +G+N L K
Sbjct: 3015 GFQLSPEN---PTICKSTSDEEPFLIF----ANRYYL-RKLNL------DGSN-YTLIKQ 3059
Query: 190 NITQPRGMMLDPSPGTRWLFWTD-WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248
+ + LD + ++WTD + I R+ ++GS+ + T + P+GL +D
Sbjct: 3060 GLNN--AVALDFDYRQQMIYWTDVTTQGSMIRRMHINGSDVQVLHRTSLSNPDGLAVDW- 3116
Query: 249 TRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
+ LYW D+G + + + + ++G+ ++
Sbjct: 3117 -----------------------------VGGNLYWCDKGRDTIEV----SKLNGAYRTV 3143
Query: 309 LVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 366
LV+ L E ALA+D+ G LY W+DWG++P I RIGMDG+NRS I+ K
Sbjct: 3144 LVNSGLREPRALAVDVRYGYLY-----------WSDWGDSPHIGRIGMDGTNRSVIVEDK 3192
Query: 367 IYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLM 419
I WPNGLTLD R+Y+AD++ D+I F + DGT R V+ D+ F L
Sbjct: 3193 ITWPNGLTLDFINDRIYWADAREDYIAFASLDGTSRHTVLAQDIPHIFAMTLF 3245
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 78 GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + C C GY L +C+ + +FL+ S I L+ K
Sbjct: 1862 GDCSQLCLPTSPTTRSCMCTAGYSLRRGQQSCEGV---GSFLLYSVHEGIRGIPLDPSDK 1918
Query: 137 ----------------DHRA-------------------------QDIVVSGLDLVEGLA 155
D A +D+V +G+ VEG+A
Sbjct: 1919 SDALVPVSGTSLAVGIDFHADNDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1978
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1979 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2036
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN 272
PRIER +DGS R+ +++ I WPNG+++D +Y+ D++ D I+ +LE N
Sbjct: 2037 YPRIERSRLDGSERAILVNVSISWPNGISIDYEDGMLYWCDARTDKIERINLETGQN 2093
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 106/242 (43%), Gaps = 56/242 (23%)
Query: 76 QPGYCSQMCT--NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA-DLE 132
+ G CS +C N + + C C G+ L D +CK H + R ++ D+
Sbjct: 500 KAGGCSDICLLGNGQKTRTCRCRSGFSLGSDGKSCKKPEHELFLVYGKGRPGVIRGMDMN 559
Query: 133 EKGKDH-----------RAQD------------------------------IVVSGLDLV 151
K D RA D I+ + V
Sbjct: 560 AKVPDEYMIPIENLMNPRALDFHAESEFIYFADATSYMIGRQKIDGTERDTILKEAIHTV 619
Query: 152 EGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
EG+A DW+ ++YW D + + ++ R L + +T PR +++DP G W+
Sbjct: 620 EGIAVDWMADNLYWTDDGPKKTISVARLEKASRTRKTLIEGKMTHPRAIVVDPLHG--WM 677
Query: 209 FWTDWGENPR------IERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLDF 261
+WTDW E+P+ IER MDGSNR+ +++K + WPNGL+LDI +Y+ D+ D
Sbjct: 678 YWTDWEEDPKESKRGKIERAWMDGSNRNVFLTSKTVLWPNGLSLDIPQGILYWVDAYYDR 737
Query: 262 ID 263
I+
Sbjct: 738 IE 739
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 72/125 (57%), Gaps = 13/125 (10%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ V +I + +G L+ +LY + L+ M +F+T
Sbjct: 309 FYFVDD----VDDRIFVCDKNGQTCVTLLDQELYNPKGIALDPTMGK---------MFFT 355
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++E MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G
Sbjct: 356 DYGQIPKVEGCDMDGHNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKN 415
Query: 402 RQQVI 406
R +I
Sbjct: 416 RHTII 420
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + GSN II T I PNGL +D ++YF+D+ LD
Sbjct: 2347 ECQSLMFWTNWNEQSPSIMRATLTGSNVLVIIGTDIRTPNGLAIDHRAEKLYFSDATLDK 2406
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
I+ C YDG+ R V+ + + F + GD
Sbjct: 2407 IERCEYDGSRRYVVLKNEPVHPFGLAVYGD 2436
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 127/330 (38%), Gaps = 58/330 (17%)
Query: 80 CSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH 138
CS +C N ++ C+C L D TC S FL+ + + I D++ ++
Sbjct: 1559 CSHLCLINFNQTFSCACPHLMKLGPDKRTCY---ESRQFLLYARQIEIRGVDIDNPYYNY 1615
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
V +D V + YD + IYW D R I+ NGT + ++ G+
Sbjct: 1616 IIS-FTVPDIDNVTVVDYDALEQRIYWSDVRTQTIKRAFINGTGVETVVSADLPNTHGLA 1674
Query: 199 LDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+D +R LFWT + N + I +DGS ++ +I
Sbjct: 1675 VDWV--SRNLFWTSYDANKKQINVARLDGSFKNAVI-----------------------Q 1709
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE- 316
LD C L + KLYW D G N I AN DG+N S+L + Q
Sbjct: 1710 GLDKPHCLVLH--------PVLGKLYWTD-GDN-----ISMANTDGTNRSVLFTNQKGPV 1755
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 376
L++D + LY W G N I R +DGS + K L
Sbjct: 1756 GLSIDFKAERLY-----------WISSG-NSTINRCKLDGSGLEVLEGAKGKLTKATALA 1803
Query: 377 IATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I ++++AD D I C+ G +V+
Sbjct: 1804 IMGDKLWWADQGTDQIGTCDKKDGGNWKVL 1833
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD---SRLN 171
A + S+ H + + + G D + VV + VEGLAY +YW S +
Sbjct: 2258 ANRIFFSDIHFGNIQQISDDGSDRKT---VVENVGSVEGLAYHRAWDMLYWTSYTTSTIT 2314
Query: 172 RIEVCDENG----TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDG 226
R V D++ V+ PR +LD +FWT+W E +P I R + G
Sbjct: 2315 RHTV-DQSRWGAVDRHTVVTMSGDDHPRAFVLDECQSL--MFWTNWNEQSPSIMRATLTG 2371
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
SN II T I PNGL +D ++YF+D+ LD I+
Sbjct: 2372 SNVLVIIGTDIRTPNGLAIDHRAEKLYFSDATLDKIE 2408
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 22/146 (15%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN +++ G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3046 KLNLDGSNYTLIKQG-LNNAVALDFD----YRQQM-----IYWTDVTTQGSMIRRMHING 3095
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
S+ + T + P+GL +D +Y+ D D I+ +G R +L++
Sbjct: 3096 SDVQVLHRTSLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYR--TVLVN------- 3146
Query: 417 DLMGDNGVPALALDLENGMLYYSTEG 442
G ALA+D+ G LY+S G
Sbjct: 3147 --SGLREPRALAVDVRYGYLYWSDWG 3170
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 143 IVVSGLDL--VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+V+ G D+ GLA D +Y+ D+ L++IE C+ +G+ R V+ K+ P G+ +
Sbjct: 2375 LVIIGTDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSRRYVVLKNEPVHPFGLAV- 2433
Query: 201 PSPGTRWLFWTDW 213
++FWTDW
Sbjct: 2434 ---YGDYIFWTDW 2443
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE-RIG 353
+I + +++ S+LV G L +ALD L S L +WTD E+ ++
Sbjct: 1288 EIRRIDLNKGEFSVLVPG-LRNTIALDFH---LNQSAL------YWTDVVEDKIYRGKLS 1337
Query: 354 MDGSNRS--TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
+G+ S +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1338 ENGALTSFDVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMR--------- 1388
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L G+ P A+ALD +G+L+++
Sbjct: 1389 ---TTLLAGEVEHPRAIALDPRDGILFWT 1414
>gi|170035892|ref|XP_001845800.1| very low-density lipoprotein receptor [Culex quinquefasciatus]
gi|167878399|gb|EDS41782.1| very low-density lipoprotein receptor [Culex quinquefasciatus]
Length = 4695
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/372 (34%), Positives = 177/372 (47%), Gaps = 65/372 (17%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V + C+ + ++CDG+ DCP+ DEG C CK+ CS+TCH P G +C+CP
Sbjct: 1194 VTNTCIKVEQLCDGRPDCPDNTDEGFHCKDNLCKN-VKECSHTCHNAPEGFVCSCPEHLF 1252
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
L + C+ + C G CSQ+CT + Y CSC EGY + +D TCK+ N A +I
Sbjct: 1253 LQPNGKECRVDHACTHWGTCSQVCTPDEKHYKCSCLEGYTMTFDKFTCKSNNVDAPHVIF 1312
Query: 121 SNRHSILVADLEEKGKDH------------------------------------------ 138
SNR I DL +
Sbjct: 1313 SNRQEIRGVDLNTLAVKNFYTSLRNTIALDFLWKNDSVQIFWTDVIDDKIFRGTLIGDSL 1372
Query: 139 -RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+ +V SGL EGLA DWIG ++YW+DS L++IEV NG+ R L ++ PR +
Sbjct: 1373 SNVEAVVQSGLSTAEGLAVDWIGMNLYWIDSNLDQIEVAKTNGSYRRTLVAGDMVNPRAI 1432
Query: 198 MLDPSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTI--ISTKIYWPNGLTLDIATRRVYF 254
LDP G LFWTDW E PRIER M G R TI + + WPNG+TLD +RVY+
Sbjct: 1433 ALDPMEG--LLFWTDWEEGAPRIERCSMAGEARVTIKMVGPEGGWPNGITLDYVLKRVYW 1490
Query: 255 ADSKLDFIDC------------KSLEIKTNVNYSTIFRK-LYWIDEGGNGVPLKIGKANM 301
D++ D I K E+ ++ T+F +YW D N V ++ K N
Sbjct: 1491 IDARSDSIHTTDYDGNDDHLVIKDQEVLSHPFSITLFDNYVYWTDWRTNSV-IRANKWN- 1548
Query: 302 DGSNASILVSGQ 313
GS+ +++ Q
Sbjct: 1549 -GSDVTVIQRTQ 1559
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 165/320 (51%), Gaps = 49/320 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EILSN 63
C+ +CDG DC + +DE C + EC+ LC++ C +G CTC PG ++ N
Sbjct: 2958 CIVRGLLCDGSNDCGDWSDE-KSCKINECEEMPNLCAHNCEDREVGYDCTCRPGFKVNIN 3016
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C D++EC ++P CSQMCTN GSY CSC EGY ++ N +CKA + LI SN
Sbjct: 3017 DKHRCDDVDECLDRP--CSQMCTNVYGSYHCSCQEGYTMKA-NGSCKADSLEHPKLIFSN 3073
Query: 123 RHSILVADL---------------------EEKG------------------KDHRAQDI 143
R+ + D+ E K ++ + +
Sbjct: 3074 RYYVREVDMNGSMNILAHNLSNAVALDFDWETKCYYWSDVTSVISSIKRMCLSSNKTEVL 3133
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
S L +GLA DW+ ++YW D L+ IE+ +G R VL N+ +PR ++L+P
Sbjct: 3134 HKSTLKNPDGLAIDWVARNLYWCDKGLDTIEISKLDGRYRKVLINQNLQEPRAIVLNPY- 3192
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+ ++WTDWG+ P I + GMDGSN++ ++S ++ WPN LT++ T +++ D++ D+I
Sbjct: 3193 -RKNMYWTDWGDQPHIGKAGMDGSNQTMLVSQQLGWPNALTINFETNELFWGDAREDYIA 3251
Query: 264 CKSLEIKTNVNYSTIFRKLY 283
LE N I+R ++
Sbjct: 3252 VSDLE--GNNRKVIIYRDMH 3269
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 148/318 (46%), Gaps = 66/318 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG--CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
+C+++ + CDG DC N P +AEC CS C TP G C C G
Sbjct: 168 KCLDIDRFCDGVWDCSNDELRCPKNTTTVAECDAL--KCSYDCRQTPNGPRCFCAKGS-Q 224
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN--------- 112
N S+ C+D +EC+ G C Q+C N G+Y C+C GY + C+A+N
Sbjct: 225 PNGSI-CEDFDECQIDGMCDQICKNLPGTYKCTCATGYARI--GNQCRAVNTPKEEPASL 281
Query: 113 ----------------------HSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGL-- 148
H + I H++L ++ + + A + V L
Sbjct: 282 LFATSTEIRKFPVINGSAVPDGHPNSSTIALPLHNVLALEMYHRNRTFCAVRLDVDALFE 341
Query: 149 ----------------------DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL 186
+ ++ ++ DWI G+ Y+LD + I VC + ++
Sbjct: 342 CFSVDNVTHTWQMPLPDLFPNINSIDHISIDWISGNWYYLDDQREIIFVCSGQMRHCTII 401
Query: 187 AKDNITQPRGMMLDPSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTL 245
++++ +PRGM LDP+ G +LF+T WG + +ER +DGSNR++I+ KI +P+G+ L
Sbjct: 402 LENDLMKPRGMALDPTKG--FLFFTKWGNSLASVERSFLDGSNRTSIVLKKIVYPHGVAL 459
Query: 246 DIATRRVYFADSKLDFID 263
D+A + VY+ D+ LD I+
Sbjct: 460 DLAMQHVYWVDTYLDSIE 477
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 93/173 (53%), Gaps = 13/173 (7%)
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
YW + ++ + +R+ + +K + + +L+ + + R LYW D+G + + +
Sbjct: 3109 YWSDVTSVISSIKRMCLSSNKTEVLHKSTLKNPDGLAIDWVARNLYWCDKGLDTIEI--- 3165
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGS 357
+ +DG +L++ L E A+ L + ++WTDWG+ P I + GMDGS
Sbjct: 3166 -SKLDGRYRKVLINQNLQEPRAIVLNPYR---------KNMYWTDWGDQPHIGKAGMDGS 3215
Query: 358 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
N++ ++S ++ WPN LT++ T +++ D++ D+I + +G R+ +I D+
Sbjct: 3216 NQTMLVSQQLGWPNALTINFETNELFWGDAREDYIAVSDLEGNNRKVIIYRDM 3268
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 19/206 (9%)
Query: 96 NEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLA 155
N G + +D H + + A ++ SI + L+ G RA+ +G +GLA
Sbjct: 635 NLGRDITFDYHIEDQLIYFAHHDKTQSKFSIEMQKLDGTG---RAKIWEAAGS--CDGLA 689
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
YDW+G ++++ +S I V +G + ++ +P ++LDP G ++W+ WG
Sbjct: 690 YDWVGHNLFYTNSARGHIVVLKLDGNASAHVVMRDLARPESIVLDPKKG--LMYWSTWGP 747
Query: 216 NPRIERIGMDGSNRSTIIS----TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
+ RIE M+G+ R+T++ + + WP+GL +D +R+Y+ DS+ I+ SLE
Sbjct: 748 DGRIEWAWMNGTERATLVQGVDGSPMIWPSGLVIDQVQKRLYWCDSRTGRIESVSLEGHD 807
Query: 272 NVNYSTIFRKLYWIDEGGNGVPLKIG 297
R L + N P+ IG
Sbjct: 808 --------RTLLYDGGSRNHFPIAIG 825
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 97/194 (50%), Gaps = 25/194 (12%)
Query: 225 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD---FIDCKSLEIKTN---VNYSTI 278
DG S+ I+ ++ N L L++ R F +LD +C S++ T+ + +
Sbjct: 302 DGHPNSSTIALPLH--NVLALEMYHRNRTFCAVRLDVDALFECFSVDNVTHTWQMPLPDL 359
Query: 279 FRKLYWIDE------GGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS-- 330
F + ID GN L D + SGQ+ + LEN ++
Sbjct: 360 FPNINSIDHISIDWISGNWYYLD------DQREIIFVCSGQMRHCTII-LENDLMKPRGM 412
Query: 331 TLKCTR-WLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 388
L T+ +LF+T WG + +ER +DGSNR++I+ KI +P+G+ LD+A + VY+ D+
Sbjct: 413 ALDPTKGFLFFTKWGNSLASVERSFLDGSNRTSIVLKKIVYPHGVALDLAMQHVYWVDTY 472
Query: 389 LDFIDFCNYDGTGR 402
LD I+ NYDG+ R
Sbjct: 473 LDSIERVNYDGSNR 486
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 179/438 (40%), Gaps = 113/438 (25%)
Query: 78 GYCSQMCTNTKG-SYICSCNEGYVLEYDNHT-CKAINHSAAFLI-----------ISNRH 124
G C +C G SY+C C GY + N + C AI++ + I S++H
Sbjct: 1899 GGCQHLCIPLSGQSYVCRCAMGYRKDAKNASKCVAIDNFLMYSIGYQLKGLPVGEASDQH 1958
Query: 125 SILVADLE----------------------EKG------KDHRAQDIVVSGLD-LVEG-- 153
++ L+ ++G +D + ++VS + +V+G
Sbjct: 1959 EAVMGPLQKISMATSIDYHAKSDFVFIADSDRGSITKIKRDGSERSVIVSNFEQVVDGNS 2018
Query: 154 ------LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
+A DW+ +IYW D + N IEV NG+ R V+A N+ P+ + +DP G +
Sbjct: 2019 IDWLGEIAVDWVADNIYWTDQKRNLIEVARLNGSLRYVVAS-NLESPQLIAVDPVSG--F 2075
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI----- 262
+F++ G +I R G+DG+ + I+ + N LTLDI + VY+ + + D I
Sbjct: 2076 IFYSGRG---KIGRTGLDGTGK-FILVNQTSAINDLTLDIENQVVYWCEVQTDTIWRVDY 2131
Query: 263 --------------DCKSLEI-KTNVNYSTIFRKL----------YW--IDEGGNGVP-L 294
+ K+L++ + N+ +S + + YW +D G V +
Sbjct: 2132 DGNMKTILLNNTLDNVKALDLYEDNIFWSDVHGNIKAANVRNITNYWPVVDSDGASVKDI 2191
Query: 295 KI-GKANMDGSNASILVSGQLYEALALD-------LENGMLYYSTLK-CTRWLFWTDWGE 345
KI +NA + +G E + +G + K C + + + +
Sbjct: 2192 KIFSSQKQQKTNACGINNGGCQELCLFNGTHPICACSHGKISQDDFKSCESYDSFLLYSK 2251
Query: 346 NPRIERIGMDGSN----------RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
IE I + N ST + I LT D + +Y++D + I+
Sbjct: 2252 VAAIESIHITDPNNINGPIPEIQNSTFLKNTI----ALTYDHDQQLIYYSDVEYSSINSV 2307
Query: 396 NYDGTGRQQVILIDLMVE 413
Y+G+ ++++ L VE
Sbjct: 2308 FYNGSNHRKIVAKQLTVE 2325
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 119/294 (40%), Gaps = 46/294 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI--- 60
+C+ + CDGK +C + +DE GC ++C FG CS C C C PG
Sbjct: 3788 KCIANNQRCDGKPNCLDESDE-LGCRRSQCG--FGTCSQVCVEKKHQYNCRCQPGYQKGP 3844
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAA-FLI 119
L ND+ QD N S + G+ + + + D H+ F I
Sbjct: 3845 LRNDTCIAQDENGLLLVSSESDFRSMYYGTTVMGFLQTNSKKIDRFDYSITKHNITLFWI 3904
Query: 120 ISNRHSI----------LVADLEEKGK----------------DHRAQDIVVSGLDLVE- 152
S+ SI +V EE G D + +++ ++V
Sbjct: 3905 DSHDKSIQKVHMDTTVKVVESGEEGGAARSSRAAPSYDRIKTLDGKHSSVILKNQNIVPL 3964
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
+A DWI HIY ++ + + I NGTN L P +++DP R + W+
Sbjct: 3965 AIACDWITEHIYVINKKQSNIFTMTYNGTNHTTLTATG-KHPIDIVVDPV--HRVMVWS- 4020
Query: 213 WGENPRIERI---GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+E I GMDG + ++ I W +GL +D T R+Y+AD + I+
Sbjct: 4021 -----VMEAIILSGMDGFKKQKLVQANIEWASGLAIDPTTDRLYWADYRKSTIE 4069
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 98/245 (40%), Gaps = 65/245 (26%)
Query: 112 NHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL---DS 168
+H + S+ + + G +HR +V+ VEGLA++ I ++W ++
Sbjct: 2288 DHDQQLIYYSDVEYSSINSVFYNGSNHRK---IVAKQLTVEGLAFNPITKQLFWTSNNEA 2344
Query: 169 RLNRIEVCDENGTN-------RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPR--- 218
+ +E+ + R ++ +PRG+ ++P ++WT+W NP+
Sbjct: 2345 AIRSLELANITADAKANADLVRELIKLKPTDKPRGIAVEPCLAM--IYWTNW--NPQAAS 2400
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
I+R G +II+T I PN +TLD +++Y+AD++ D
Sbjct: 2401 IQRAYPSGYGLESIITTDIRMPNAITLDYQAKKLYWADARYD------------------ 2442
Query: 279 FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWL 338
KI +A+ DG N +L A M Y L L
Sbjct: 2443 ----------------KIERADYDGKNRVVLAHSTPKHPFA------MAVYGDL-----L 2475
Query: 339 FWTDW 343
FWTDW
Sbjct: 2476 FWTDW 2480
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 147/407 (36%), Gaps = 78/407 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ +CD K DC + +DE +C CS+ C P + +D
Sbjct: 3749 CIRKAMMCDNKNDCGDNSDEKAS-QCLKCPPDTFRCSSDSKCIANNQRCDGKPNCLDESD 3807
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVL-EYDNHTCKAINHSAAFLIISNR 123
+ C+ ++C G CSQ+C K Y C C GY N TC A + + L+ S
Sbjct: 3808 ELGCR-RSQCGF-GTCSQVCVEKKHQYNCRCQPGYQKGPLRNDTCIAQDENGLLLVSSE- 3864
Query: 124 HSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHI--YWLDSRLNRIEVCDENGT 181
+D + + ++ Y +I +W+DS I+ + T
Sbjct: 3865 -----SDFRSMYYGTTVMGFLQTNSKKIDRFDYSITKHNITLFWIDSHDKSIQKVHMDTT 3919
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIG-MDGSNRSTIISTKIYWP 240
++V + + R PS +RI +DG + S I+ + P
Sbjct: 3920 VKVVESGEEGGAARSSRAAPS----------------YDRIKTLDGKHSSVILKNQNIVP 3963
Query: 241 NGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D T +Y + K S IF Y
Sbjct: 3964 LAIACDWITEHIYVINKK----------------QSNIFTMTY----------------- 3990
Query: 301 MDGSNASIL-VSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNR 359
+G+N + L +G+ + +D + ++ +S ++ I GMDG +
Sbjct: 3991 -NGTNHTTLTATGKHPIDIVVDPVHRVMVWSVME--------------AIILSGMDGFKK 4035
Query: 360 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
++ I W +GL +D T R+Y+AD + I+ C G + VI
Sbjct: 4036 QKLVQANIEWASGLAIDPTTDRLYWADYRKSTIETCMLLTGGDRHVI 4082
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 11/155 (7%)
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV-PLKIGKANMDGSNASILV 310
V++ S I K L ++ + ++ I ++L+W + L++ D + LV
Sbjct: 2307 VFYNGSNHRKIVAKQLTVE-GLAFNPITKQLFWTSNNEAAIRSLELANITADAKANADLV 2365
Query: 311 SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR---IERIGMDGSNRSTIISTKI 367
+L + D G+ + C ++WT+W NP+ I+R G +II+T I
Sbjct: 2366 R-ELIKLKPTDKPRGI---AVEPCLAMIYWTNW--NPQAASIQRAYPSGYGLESIITTDI 2419
Query: 368 YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
PN +TLD +++Y+AD++ D I+ +YDG R
Sbjct: 2420 RMPNAITLDYQAKKLYWADARYDKIERADYDGKNR 2454
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 70/135 (51%), Gaps = 23/135 (17%)
Query: 275 YSTIFRKLYWIDEG-GNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYST 331
Y + L++ + G+ V LK +DG+ ++ +V L E++ LD + G++Y
Sbjct: 690 YDWVGHNLFYTNSARGHIVVLK-----LDGNASAHVVMRDLARPESIVLDPKKGLMY--- 741
Query: 332 LKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS----TKIYWPNGLTLDIATRRVYFADS 387
W+ WG + RIE M+G+ R+T++ + + WP+GL +D +R+Y+ DS
Sbjct: 742 --------WSTWGPDGRIEWAWMNGTERATLVQGVDGSPMIWPSGLVIDQVQKRLYWCDS 793
Query: 388 KLDFIDFCNYDGTGR 402
+ I+ + +G R
Sbjct: 794 RTGRIESVSLEGHDR 808
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 29/203 (14%)
Query: 218 RIERIGMDGSNRSTIIS----TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE----- 268
I + + N TI + T++ P L DIA R+Y+ D L I L
Sbjct: 1632 EIRGVDLQQPNHYTIPTISHQTQVVQPAVLDYDIAEARLYWNDVLLKEIKSSELATGPIE 1691
Query: 269 --IKTNVNYSTIFRKLYWIDE-----GGNGVPLKIGKANMDGSNASILVSG-QLYEALAL 320
+ T+++ S F + WI G +I NM G + ++SG + +L +
Sbjct: 1692 TILDTDISNSMGF-AVDWISRLLYVSTGTETSSRILACNMKGEFLTEILSGLKAVYSLVV 1750
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
GMLY++T+ + L+ + MDGS + I ++ L LD T
Sbjct: 1751 HPSKGMLYFATIHESPNLY--------ELYSARMDGSEKQLISNSTFNAMESLVLDFETD 1802
Query: 381 RVYFADSKLDFIDFCNYD-GTGR 402
R+Y+ SKL I + YD TG+
Sbjct: 1803 RLYYILSKLGEIYY--YDIATGK 1823
>gi|14718545|gb|AAK72954.1|AF355595_1 lipophorin receptor [Aedes aegypti]
Length = 1156
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 157/304 (51%), Gaps = 55/304 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADE-GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L+KVCD K DCP DE C EC G CS+ C TP G C C PG L N
Sbjct: 396 CIPLSKVCDKKPDCPEFQDEPNDKCGKNECLENNGGCSHLCVDTPAGFYCDCKPGYKLVN 455
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
+ TC+D++EC + G CSQ CTN G+ C C GY+ + +HT CKA A+ L+ +
Sbjct: 456 NR-TCEDIDECAEAGSCSQKCTNEIGTSKCECMPGYLRDPRDHTKCKATEGHAS-LLFAR 513
Query: 123 RHSILVADLEEKGKDHRAQDIVV------SGLDLV------------------------- 151
RH I L DHR +V + LD V
Sbjct: 514 RHDIRKISL-----DHREMTSIVNDTKSATALDFVFRTGMIYWSDVSEQRIYKAPIDEGS 568
Query: 152 -------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
+GLA DWI HIY+ D + IE+ + +G +L KD++ PR +
Sbjct: 569 DKTVVVKDQTVTSDGLAVDWIYNHIYFTDIKKATIELTNFDGNMGKILIKDDLEIPRAIA 628
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
LDP G W++WTDWG PRIER GMDG++R I++ ++ WPNG+TLD+ +RVY+ D+K
Sbjct: 629 LDPIDG--WMYWTDWGTTPRIERAGMDGTHRQVIVTYEVKWPNGITLDLVRKRVYWVDAK 686
Query: 259 LDFI 262
L+ I
Sbjct: 687 LNTI 690
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 131 LEEKGKD--HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL-- 186
+E G D HR Q IV + G+ D + +YW+D++LN I CD +G+ R V+
Sbjct: 647 IERAGMDGTHR-QVIVTYEVKWPNGITLDLVRKRVYWVDAKLNTISSCDYDGSKRTVVLY 705
Query: 187 AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ D + P + +++WTDW + + +G + + + +
Sbjct: 706 SADYLRHPFSITT----FEDYVYWTDWDKEAVFKASKFNGKDIEPVTAMHM 752
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 24/135 (17%)
Query: 306 ASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD-GSNRSTIIS 364
SI+ + AL GM+Y W+D E RI + +D GS+++ ++
Sbjct: 528 TSIVNDTKSATALDFVFRTGMIY-----------WSDVSEQ-RIYKAPIDEGSDKTVVVK 575
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGV 424
+ +GL +D +YF D K I+ N+DG + +I DL +
Sbjct: 576 DQTVTSDGLAVDWIYNHIYFTDIKKATIELTNFDGNMGKILIKDDLEIPR---------- 625
Query: 425 PALALDLENGMLYYS 439
A+ALD +G +Y++
Sbjct: 626 -AIALDPIDGWMYWT 639
>gi|28572061|ref|NP_788742.1| lipophorin receptor 2, isoform B [Drosophila melanogaster]
gi|28381467|gb|AAO41604.1| lipophorin receptor 2, isoform B [Drosophila melanogaster]
Length = 826
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 155/299 (51%), Gaps = 44/299 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ KVC+ + DCPNG DE G C + EC K G C + C +G C C G L
Sbjct: 295 CIPNAKVCNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQCVNLEVGYRCECHDGYKLGA 354
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D TC D++ECE PG CSQ+C N G++ C C GY+ NHT CKA + A L+++
Sbjct: 355 DQHTCVDIDECETPGICSQVCVNEIGAFKCECEAGYMRLLKNHTRCKA-SEGHASLLLAR 413
Query: 123 RHSILVADLEEKG-------------------------KDHRAQDIVVSGLD-------- 149
RH I L+ D Q I + +D
Sbjct: 414 RHDIRKIALDRPEMTSIVNSTKAATALDFVFRTGMIFWSDVATQSIYKAPIDEGNDRTVV 473
Query: 150 ------LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+GLA DWI H+Y+ D+ IE+ + G+ VL KD++ PR + LDP
Sbjct: 474 LTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSIALDPIE 533
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G W++W+DWG +PRIER GMDG++R+ II+ + WPNG+TLD+ +R+Y+ D KL+ I
Sbjct: 534 G--WMYWSDWGASPRIERAGMDGTHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTI 590
>gi|161078649|ref|NP_001097929.1| lipophorin receptor 2, isoform F [Drosophila melanogaster]
gi|33589593|gb|AAQ22563.1| GH26833p [Drosophila melanogaster]
gi|158030400|gb|ABW08769.1| lipophorin receptor 2, isoform F [Drosophila melanogaster]
Length = 861
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 155/299 (51%), Gaps = 44/299 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ KVC+ + DCPNG DE G C + EC K G C + C +G C C G L
Sbjct: 295 CIPNAKVCNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQCVNLEVGYRCECHDGYKLGA 354
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D TC D++ECE PG CSQ+C N G++ C C GY+ NHT CKA + A L+++
Sbjct: 355 DQHTCVDIDECETPGICSQVCVNEIGAFKCECEAGYMRLLKNHTRCKA-SEGHASLLLAR 413
Query: 123 RHSILVADLEEKG-------------------------KDHRAQDIVVSGLD-------- 149
RH I L+ D Q I + +D
Sbjct: 414 RHDIRKIALDRPEMTSIVNSTKAATALDFVFRTGMIFWSDVATQSIYKAPIDEGNDRTVV 473
Query: 150 ------LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+GLA DWI H+Y+ D+ IE+ + G+ VL KD++ PR + LDP
Sbjct: 474 LTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSIALDPIE 533
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G W++W+DWG +PRIER GMDG++R+ II+ + WPNG+TLD+ +R+Y+ D KL+ I
Sbjct: 534 G--WMYWSDWGASPRIERAGMDGTHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTI 590
>gi|442621189|ref|NP_001262971.1| lipophorin receptor 2, isoform I [Drosophila melanogaster]
gi|440217904|gb|AGB96351.1| lipophorin receptor 2, isoform I [Drosophila melanogaster]
Length = 834
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 155/299 (51%), Gaps = 44/299 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ KVC+ + DCPNG DE G C + EC K G C + C +G C C G L
Sbjct: 296 CIPNAKVCNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQCVNLEVGYRCECHDGYKLGA 355
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D TC D++ECE PG CSQ+C N G++ C C GY+ NHT CKA + A L+++
Sbjct: 356 DQHTCVDIDECETPGICSQVCVNEIGAFKCECEAGYMRLLKNHTRCKA-SEGHASLLLAR 414
Query: 123 RHSILVADLEEKG-------------------------KDHRAQDIVVSGLD-------- 149
RH I L+ D Q I + +D
Sbjct: 415 RHDIRKIALDRPEMTSIVNSTKAATALDFVFRTGMIFWSDVATQSIYKAPIDEGNDRTVV 474
Query: 150 ------LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+GLA DWI H+Y+ D+ IE+ + G+ VL KD++ PR + LDP
Sbjct: 475 LTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSIALDPIE 534
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G W++W+DWG +PRIER GMDG++R+ II+ + WPNG+TLD+ +R+Y+ D KL+ I
Sbjct: 535 G--WMYWSDWGASPRIERAGMDGTHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTI 591
>gi|426337326|ref|XP_004032660.1| PREDICTED: low-density lipoprotein receptor-related protein
1B-like, partial [Gorilla gorilla gorilla]
Length = 867
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 154/509 (30%), Positives = 227/509 (44%), Gaps = 90/509 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+GK DCP+G+DEG CD EC G CSN C P G +C+CP G L+
Sbjct: 275 CLQPEKLCNGKKDCPDGSDEGDLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLNK 332
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC EG+ L+ D +C +++ AF+I S R
Sbjct: 333 DNKTCEIVDYCSNHLKCSQVCEQHKHTVKCSCYEGWKLDVDGESCTSVDPFEAFIIFSIR 392
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 393 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAIE 452
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 453 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDP 512
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 513 RYGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAR 570
Query: 259 LDFI------DCKSLEIKTNVNY-------STIFRKLYWIDEGGNGVPLKIGKANM-DGS 304
D I +EI Y S ++YW D N + KAN G
Sbjct: 571 SDAIYSALYDGTNMIEIIRGHEYLSHPFAVSLYGSEVYWTDWRTN----TLSKANKWTGQ 626
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
N S++ Q A DL+ +Y+ + + + + I + +D + I +
Sbjct: 627 NVSVI---QKTSAQPFDLQ---IYHPSRQPQEMKKFLLYARRSEIRGVDIDNPYFNFITA 680
Query: 365 TKIYWPNGLTL---DIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+ + +T+ D + R+Y+ D K I +GTG + VI D+
Sbjct: 681 FTVPDIDDVTVIDFDASEERLYWTDIKTQTIKRAFINGTGLETVISRDIQ---------- 730
Query: 422 NGVPALALDLENGMLYYSTEGAEFLKTPL 450
+ LA+D + LY+ + +EF +T +
Sbjct: 731 -SIRGLAVDWVSRNLYWIS--SEFDETQI 756
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 106/234 (45%), Gaps = 29/234 (12%)
Query: 106 HTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYW 165
H + FL+ + R I D++ + V +D V + +D +YW
Sbjct: 645 HPSRQPQEMKKFLLYARRSEIRGVDIDNPYFNFITA-FTVPDIDDVTVIDFDASEERLYW 703
Query: 166 LDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW-TDWGENPRIERIGM 224
D + I+ NGT + +I RG+ +D +R L+W + + +I +
Sbjct: 704 TDIKTQTIKRAFINGTGLETVISRDIQSIRGLAVDWV--SRNLYWISSEFDETQINVARL 761
Query: 225 DGSNRSTIIS--------------TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
DGS +++II K+YW +G T+++A + ++SK+ F + K +
Sbjct: 762 DGSLKTSIIHGIDKPQCLAAHPVRGKLYWTDGNTINMAN--MDGSNSKILFQNQKE-PVG 818
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS--GQLYEALALDL 322
+++Y + KLYWI GNG I + N+DG N ++ S +L +A AL +
Sbjct: 819 LSIDY--VENKLYWI-SSGNGT---INRCNLDGGNLEVIESMKEELTKATALTI 866
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 106/281 (37%), Gaps = 47/281 (16%)
Query: 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML-----DPSPG 204
L A G +YW D R N + ++ + + + QP + + P
Sbjct: 594 LSHPFAVSLYGSEVYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYHPSRQPQEM 653
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN-----GLTLDIATRRVYFADSKL 259
++L + R E G+D N T P+ + D + R+Y+ D K
Sbjct: 654 KKFLLYA-----RRSEIRGVDIDNPYFNFITAFTVPDIDDVTVIDFDASEERLYWTDIKT 708
Query: 260 D-----FIDCKSLEIKTNVNYSTI--------FRKLYWIDEGGNGVPLKIGKANMDGSNA 306
FI+ LE + + +I R LYWI + + + A +DGS
Sbjct: 709 QTIKRAFINGTGLETVISRDIQSIRGLAVDWVSRNLYWISSEFDETQINV--ARLDGSLK 766
Query: 307 SILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
+ ++ G + LA G LY W + I MDGSN S I+
Sbjct: 767 TSIIHGIDKPQCLAAHPVRGKLY--------------WTDGNTINMANMDGSN-SKILFQ 811
Query: 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
P GL++D ++Y+ S I+ CN DG G +VI
Sbjct: 812 NQKEPVGLSIDYVENKLYWISSGNGTINRCNLDG-GNLEVI 851
>gi|442621187|ref|NP_001262970.1| lipophorin receptor 2, isoform H [Drosophila melanogaster]
gi|440217903|gb|AGB96350.1| lipophorin receptor 2, isoform H [Drosophila melanogaster]
Length = 862
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 155/299 (51%), Gaps = 44/299 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ KVC+ + DCPNG DE G C + EC K G C + C +G C C G L
Sbjct: 296 CIPNAKVCNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQCVNLEVGYRCECHDGYKLGA 355
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D TC D++ECE PG CSQ+C N G++ C C GY+ NHT CKA + A L+++
Sbjct: 356 DQHTCVDIDECETPGICSQVCVNEIGAFKCECEAGYMRLLKNHTRCKA-SEGHASLLLAR 414
Query: 123 RHSILVADLEEKG-------------------------KDHRAQDIVVSGLD-------- 149
RH I L+ D Q I + +D
Sbjct: 415 RHDIRKIALDRPEMTSIVNSTKAATALDFVFRTGMIFWSDVATQSIYKAPIDEGNDRTVV 474
Query: 150 ------LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+GLA DWI H+Y+ D+ IE+ + G+ VL KD++ PR + LDP
Sbjct: 475 LTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSIALDPIE 534
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G W++W+DWG +PRIER GMDG++R+ II+ + WPNG+TLD+ +R+Y+ D KL+ I
Sbjct: 535 G--WMYWSDWGASPRIERAGMDGTHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTI 591
>gi|432859608|ref|XP_004069178.1| PREDICTED: low-density lipoprotein receptor-related protein 1-like
[Oryzias latipes]
Length = 4553
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 133/404 (32%), Positives = 187/404 (46%), Gaps = 92/404 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+N T +CD K DC +G+DE C + EC K CS C +G C C PG L +
Sbjct: 2918 CINDTLLCDHKDDCGDGSDE-LNCFINECLNSKLSGCSQLCEDLKIGFKCRCHPGFRLKD 2976
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D TC D++EC C+Q C NT GS+ C C EG+ L N T CK+I+ FLI +N
Sbjct: 2977 DGKTCVDIDECTTVYPCTQRCINTHGSFHCLCVEGFQLSPQNPTICKSISDEEPFLIFAN 3036
Query: 123 RH--------------------------------SILVADLEEKGKDHRAQDIVVSGLDL 150
R+ I D+ +G R I S + +
Sbjct: 3037 RYYLRKLNLDGSNYTLLKQGLNNAVALDFDYHQQMIYWTDVNTQGSMIRRMHINGSNVQV 3096
Query: 151 V--------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ +GLA DWIGG++YW D + IEV NG R VL + + +PR + +D
Sbjct: 3097 LHRTLLSNPDGLAVDWIGGNLYWCDKGRDTIEVSKLNGAYRTVLINNGLKEPRAVAVDVR 3156
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+WTDWG+N I RIGMDG+NRS II I WPNGLTLD R+Y+AD++ D+
Sbjct: 3157 YG--YLYWTDWGDNAHIGRIGMDGTNRSVIIQDNITWPNGLTLDFVNDRIYWADAREDY- 3213
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
I A++DG+N +++ + A+ L
Sbjct: 3214 ---------------------------------IAFASLDGTNRHTVLAEDIPHIFAMTL 3240
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD-GSNRSTIIST 365
+++WTDW E I R G+N++ +IST
Sbjct: 3241 FE-----------EYIYWTDW-ETKSINRAHKTLGTNKTMLIST 3272
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 166/329 (50%), Gaps = 56/329 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C++++K+C+G DC +G DEGP C C C TP G C C G +S+D
Sbjct: 95 CIHMSKLCNGAPDCTDGWDEGPHCREYMSNCTISTCKENCAVTPAGPACYCKSGYEISSD 154
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN---HSAAFLIIS 121
TC+D +EC G CSQ CTNT+GSY CSC EGY+ + DN +CKA N L+I+
Sbjct: 155 GKTCKDFDECSVYGTCSQTCTNTEGSYTCSCVEGYLSQPDNRSCKAKNVPVDRLPVLLIA 214
Query: 122 NRHSILVAD---------LEEKGKDHRAQDIVVS-------------------------- 146
N +I L K A D + S
Sbjct: 215 NSQNIQATSLSGSTVHSLLSTSTKQTTAMDFIYSKETVCWIHVGDSPSATHLKCALIPNL 274
Query: 147 -------------GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
L VE +A DW+ G+ Y++D +RI VCD++G + L +
Sbjct: 275 KSFTEERVINISFSLHHVEQMAIDWLTGNFYFVDDVDDRIFVCDKDGLICVTLLDQELYN 334
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY
Sbjct: 335 PKGIALDPTMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVY 392
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
+AD+ LD+I+ E K N TI + L
Sbjct: 393 WADAYLDYIEVVDYEGK---NRHTIIQGL 418
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 150/304 (49%), Gaps = 51/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DCP+G+DE CDL C G CS+ C P G +C+CP G L +
Sbjct: 1165 CLPAEKLCDGTDDCPDGSDEKL-CDL--CSLDNGGCSHNCTVAPGEGVICSCPLGMELGS 1221
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+ LE D CK+ + F+I SNR
Sbjct: 1222 DNKTCQIQSFCAKHLKCSQRCEQDKFSVKCSCYEGWELEPDMENCKSTDPFKPFIIFSNR 1281
Query: 124 HSILVADLEE-------------------------------KGKDHRAQ----------D 142
H I DL + + K +R + D
Sbjct: 1282 HEIRRIDLNKGEFSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLSENGALTSFD 1341
Query: 143 IVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V+ GL EGLA DWI G+IYW++S L++IEV +GT R L + PR + LDP
Sbjct: 1342 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMRTTLLAGEVEHPRAIALDP 1401
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIY--WPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G R TI WPNGLT+D RR+ + D++
Sbjct: 1402 RDGI--LFWTDWDASLPRIEAASMSGEGRKTIHKETGNGGWPNGLTVDYLERRILWIDAR 1459
Query: 259 LDFI 262
D I
Sbjct: 1460 SDAI 1463
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 130/286 (45%), Gaps = 63/286 (22%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T K + C C GY L + +C+ + +FL+ S I L+ K
Sbjct: 1857 GDCSQLCLPTSKSTRACMCTAGYSLRREKQSCEGV---GSFLLYSVHEGIRGIPLDPADK 1913
Query: 137 ----------------DHRAQ-------------------------DIVVSGLDLVEGLA 155
D A+ D+V +G+ VEG+A
Sbjct: 1914 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1973
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1974 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAIAVHPERG--YLFWTEWGQ 2031
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R+ +++ I WPNG+++D R+Y+ D++ D I+ +LE N
Sbjct: 2032 YPRIERSRLDGTQRAVLVNVSISWPNGISIDYEEGRLYWCDARTDKIERINLETGENREM 2091
Query: 273 ---------VNYSTIFRKLYWIDE-GGNGVPLKIGKANMDGSNASI 308
+ S +YW D NG I + N D + S+
Sbjct: 2092 VLASNNMDMFSVSVFESYIYWSDRTHANG---SIKRGNKDNATDSV 2134
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 180/417 (43%), Gaps = 95/417 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD---LAECKHKFGLCSN----TCHPTPLGALCTCP 56
C++ C+ DC + + C L +C LC + C + C+C
Sbjct: 3753 HCISSALRCNYFNDCDDYGSDEISCQKKVLNDCSSNRTLCGDGDEAHCVMNGTDSFCSCK 3812
Query: 57 PGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAA 116
PG SN C+D NEC+Q G CS +C NTKGSY+C+C++ + NHTCK
Sbjct: 3813 PG-FQSNGKNRCEDKNECQQFGVCSHICNNTKGSYMCTCHKPFTKH--NHTCKTD----- 3864
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
S RH + +AD E R+ D VS +W I+ D+ + RI+
Sbjct: 3865 ----SQRH-LYIADDNEI----RSLDPSVS----------NWRYEQIFQGDANV-RIDAM 3904
Query: 177 DEN-GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST 235
D + TNRI +WT+W RI + S+ S+ S
Sbjct: 3905 DLHVKTNRI------------------------YWTNW-HTRRISSYDLPSSSTSSQNSN 3939
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
RR +D+++ +D L++ + + LYW D G + + +
Sbjct: 3940 ------------RNRRQ--SDTRVTNLDIPDLKMPRGIAVDWVAGNLYWTDSGRDVIEV- 3984
Query: 296 IGKANMDGS-NASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
A M G + L+SG + E ++ +D + G +Y WTDWG +P+IE
Sbjct: 3985 ---AQMSGGRHRKTLISGMIDEPHSIVVDPQRGKMY-----------WTDWGNHPKIETA 4030
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
MDG+ R T++ I WP GL +D R+Y+AD+KL I C+ G V+ ++
Sbjct: 4031 AMDGTMRETLVEKNIQWPTGLAVDYFNERLYWADAKLSLI--CSVRLNGSDAVVAVN 4085
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 107/242 (44%), Gaps = 56/242 (23%)
Query: 76 QPGYCSQMCT--NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA-DLE 132
+PG CS +C N + C C G+ L D +CK H + R ++ D+
Sbjct: 495 KPGGCSDICLLGNGHKTRTCRCRSGFSLGSDGKSCKKPEHELFLVYGKGRPGVIRGMDMN 554
Query: 133 EKGKDH-----------RAQD------------------------------IVVSGLDLV 151
K D RA D I+ G+ V
Sbjct: 555 AKVPDEYMIPIENLMNPRALDFHAESEFIYFADATSYIIGRQRIDGTERDIILKEGIHTV 614
Query: 152 EGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
EG+A DW+ ++YW D + + ++ R L + +T PR +++DP G W+
Sbjct: 615 EGIAVDWMADNLYWTDDGPKKTISVARLEKASQTRKTLIEGKMTHPRAIVVDPLHG--WM 672
Query: 209 FWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLDF 261
+WTDW E+P +IER MDGSNR+ +++K + WPNGL+LDI +Y+ D+ D
Sbjct: 673 YWTDWEEDPKESKRGKIERAWMDGSNRNVFLTSKTVLWPNGLSLDIPQGILYWVDAYYDR 732
Query: 262 ID 263
I+
Sbjct: 733 IE 734
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 114/273 (41%), Gaps = 47/273 (17%)
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML-------DPSPGTRWLF 209
D+ G +Y + L + + DEN N + ++ + ++ G +F
Sbjct: 2198 DYDGYLLYSERTILKSVHLSDENNLNAPIKPFEDPEHMKNVIALSFDHRGGGGKGANRIF 2257
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEI 269
++D I++I DGS+R TI+ + GL +Y+
Sbjct: 2258 FSDI-HFGNIQQISDDGSDRKTIVEN-VGSVEGLAYHRGWDMLYW--------------- 2300
Query: 270 KTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
T+ STI R + +D+ G + M G + A ALD
Sbjct: 2301 -TSYTTSTITR--HTVDQSRWGAVDRHTVVTMSGDDHP--------RAFALD-------- 2341
Query: 330 STLKCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 388
+C +FWT+W E +P I R + G+N II T I PNGL +D ++YF+D+
Sbjct: 2342 ---ECQSLMFWTNWNEQSPSIMRATLTGANVLVIIGTDIKTPNGLAIDHRAEKLYFSDAT 2398
Query: 389 LDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
LD I+ C YDG+ R V+ + + F + GD
Sbjct: 2399 LDKIERCEYDGSRRYVVLKNEPVHPFGLAVYGD 2431
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 127/330 (38%), Gaps = 58/330 (17%)
Query: 80 CSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH 138
CS +C N ++ C+C L D TC S FL+ + + I D++ ++
Sbjct: 1554 CSHLCLINYNQTFSCACPHLMKLGPDKRTCY---ESRQFLLYARQIEIRGVDIDNPYYNY 1610
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
V +D V + YD + IYW D R I+ NGT + ++ G+
Sbjct: 1611 IIS-FTVPDIDNVTVVDYDALEHRIYWSDVRTQTIKRAFINGTGVETVVSADLPNTHGLA 1669
Query: 199 LDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+D +R LFWT + N + I +DGS ++ +I
Sbjct: 1670 VDWV--SRNLFWTSYDANKKQINVARLDGSFKNAVI-----------------------Q 1704
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE- 316
LD C L KLYW D G N I AN DG+N SIL + Q
Sbjct: 1705 GLDKPHCLVLH--------PTLGKLYWTD-GDN-----ISMANTDGTNRSILFTNQKGPV 1750
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 376
L++D + T L+W G N I R +DGS + K L
Sbjct: 1751 GLSIDFD-----------TEQLYWISSG-NSTINRCKLDGSALEVLEGAKGKLIKATALA 1798
Query: 377 IATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I ++++AD D I C+ G +V+
Sbjct: 1799 IMGDKLWWADQGTDQIGTCDKKNGGNWKVL 1828
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 14/157 (8%)
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD---SRLN 171
A + S+ H + + + G D + +V + VEGLAY +YW S +
Sbjct: 2253 ANRIFFSDIHFGNIQQISDDGSDRKT---IVENVGSVEGLAYHRGWDMLYWTSYTTSTIT 2309
Query: 172 RIEVCDENG----TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDG 226
R V D++ V+ PR LD +FWT+W E +P I R + G
Sbjct: 2310 RHTV-DQSRWGAVDRHTVVTMSGDDHPRAFALDECQSL--MFWTNWNEQSPSIMRATLTG 2366
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+N II T I PNGL +D ++YF+D+ LD I+
Sbjct: 2367 ANVLVIIGTDIKTPNGLAIDHRAEKLYFSDATLDKIE 2403
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 33/218 (15%)
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
+ +IYW + T I +R + + ++ + L + + R L+W N
Sbjct: 1630 LEHRIYWSDVRTQTI--KRAFINGTGVETVVSADLPNTHGLAVDWVSRNLFWTSYDANKK 1687
Query: 293 PLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+ + A +DGS + ++ G LD + ++ + TL L+WTD G+N I
Sbjct: 1688 QINV--ARLDGSFKNAVIQG-------LDKPHCLVLHPTLG---KLYWTD-GDN--ISMA 1732
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
DG+NRS I+ T P GL++D T ++Y+ S I+ C DG+ +
Sbjct: 1733 NTDGTNRS-ILFTNQKGPVGLSIDFDTEQLYWISSGNSTINRCKLDGSALEV-------- 1783
Query: 413 EFTNDLMGDNG--VPALALDLENGMLYYSTEGAEFLKT 448
L G G + A AL + L+++ +G + + T
Sbjct: 1784 -----LEGAKGKLIKATALAIMGDKLWWADQGTDQIGT 1816
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 28/149 (18%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWG-ENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y+ + ++WTD + I R+ ++G
Sbjct: 3042 KLNLDGSNYTLLKQG-LNNAVALDFD----YHQQM-----IYWTDVNTQGSMIRRMHING 3091
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R +I
Sbjct: 3092 SNVQVLHRTLLSNPDGLAVDWIGGNLYWCDKGRDTIEVSKLNGAYRTVLI---------- 3141
Query: 417 DLMGDNGVP---ALALDLENGMLYYSTEG 442
+NG+ A+A+D+ G LY++ G
Sbjct: 3142 ----NNGLKEPRAVAVDVRYGYLYWTDWG 3166
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 140 AQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
A +V+ G D+ GLA D +Y+ D+ L++IE C+ +G+ R V+ K+ P G+
Sbjct: 2367 ANVLVIIGTDIKTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSRRYVVLKNEPVHPFGL 2426
Query: 198 MLDPSPGTRWLFWTDW 213
+ ++FWTDW
Sbjct: 2427 AV----YGDYIFWTDW 2438
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE-RIG 353
+I + +++ S+LV G L +ALD L S L +WTD E+ ++
Sbjct: 1283 EIRRIDLNKGEFSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLS 1332
Query: 354 MDGSNRS--TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
+G+ S +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1333 ENGALTSFDVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMR--------- 1383
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L G+ P A+ALD +G+L+++
Sbjct: 1384 ---TTLLAGEVEHPRAIALDPRDGILFWT 1409
>gi|156391903|ref|XP_001635789.1| predicted protein [Nematostella vectensis]
gi|156222886|gb|EDO43726.1| predicted protein [Nematostella vectensis]
Length = 711
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 192/408 (47%), Gaps = 89/408 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
RC+ +KVCDG DC +G DE C++ ECK G CS C+ LG C+C G L
Sbjct: 298 RCIPESKVCDGTRDCQDGEDEPLRCNIDECKDHNGHCSQKCNDLTLGYNCSCFSGYKLQG 357
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA------INHSAAF 117
+ C D++EC + G CSQ+C N KGS+ CSC GY ++ D TC+A + +S+ F
Sbjct: 358 ARL-CVDIDECAEYGTCSQVCENRKGSFKCSCLPGYRIDGDGRTCRANGTLPSLVYSSQF 416
Query: 118 -------------LIISNRHSILVADLEEKGK-----DHRAQDI-------------VVS 146
I+S R ++ D + K D +A+ I +V
Sbjct: 417 SIRNVTVSGAISQAIVSGRKGVVGLDYDYKSNLIFWTDAKAEKINRARLDGSGSVEEIVG 476
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTR 206
+ + + + DW G IYW D N IEV + G +R+ L + +PR +++DPS G
Sbjct: 477 DVKVPDDVTVDWSGRKIYWTDGEQNMIEVAELTGAHRMTLFSSGLDEPRAIVVDPSAG-- 534
Query: 207 WLFWTDWGENPRIERIGMDG--SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
+L+WTDWG N RIER GMDG S R+ IIS ++ WPNGLT+D +R+Y+AD++L
Sbjct: 535 YLYWTDWGYNARIERAGMDGDASTRTIIISGELGWPNGLTIDYTIKRLYWADARL----- 589
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
+I + +DGS+ ++ A+ +
Sbjct: 590 -----------------------------KRIESSRLDGSDRRLIADIAPQHPFAITVFE 620
Query: 325 GMLYYSTLKCTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPN 371
LYY TDW + R + R+ TI+ ++ WP+
Sbjct: 621 NYLYY-----------TDWNRDERALRRVNKFTGGERTIVK-RVLWPH 656
>gi|443703557|gb|ELU01036.1| hypothetical protein CAPTEDRAFT_219267 [Capitella teleta]
Length = 4831
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 191/421 (45%), Gaps = 92/421 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CVN ++C+G +C + +DE CD+ EC+ C C P+GA C+C PG L+
Sbjct: 2955 CVNRKQLCNGLNECGDASDEDL-CDINECEISSVRYCQQICEDLPIGAKCSCRPGYALAE 3013
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D +C+D+NECE CS C NT GS+ CSC G++L D TC+ F+++SNR
Sbjct: 3014 DGTSCKDVNECES-NVCSHFCQNTAGSFHCSCALGFILGPDKRTCRGNTSDVPFILVSNR 3072
Query: 124 HSILVADLEEKGKDHRAQDI------------------------------VVSGLDL--- 150
+ I L+ D D+ V+G D
Sbjct: 3073 YYIRNVSLDGHHVDVLKHDLNRAVALDFDWEEQRIYWSDIMSSNSNISSMYVNGNDSKVL 3132
Query: 151 -------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+GLA DW+G +++W D + IEV +G+ R VL + +PR + + P
Sbjct: 3133 HRATLRNPDGLAVDWLGRNLFWCDKTTDTIEVSKLDGSLRRVLVDKGLEEPRALAVHPLR 3192
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLDFI 262
G WLF++DWG+N I R+GMDGSN S II+ + + WPNGL +D T V++AD++LD+I
Sbjct: 3193 G--WLFYSDWGDNAHIGRLGMDGSNYSIIITKQLVMWPNGLAVDFITDHVFWADARLDYI 3250
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
F KL DG+ ++ G L A+ +
Sbjct: 3251 ---------------AFSKL-------------------DGTQVRYVIQGNLPHIFAVTV 3276
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+Y WTDW EN +ER T I T ++ P L + R++
Sbjct: 3277 YEDYIY-----------WTDW-ENKSVERARKFTGQNHTRIMTMVHRPMDLQVFHPFRQL 3324
Query: 383 Y 383
+
Sbjct: 3325 H 3325
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 178/425 (41%), Gaps = 104/425 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPP-GEILS 62
+C+N T++C+G+ DC +G+DEG C C+ C + CH TP G +C CP +I
Sbjct: 1211 KCLNYTQLCNGEADCEDGSDEGDLCYFDSCRSNN--CEHECHNTPEGYVCVCPQDKKIDP 1268
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSY-ICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D C ++ CE G C+Q C + C CN G+ L DN+TC ++ ++I S
Sbjct: 1269 SDPEKCVELVTCEW-GLCNQHCEEKHDVFHACVCNAGFELIADNYTCTPLSDDPVYVIFS 1327
Query: 122 NRHSILVADLEEKG------------------KDHRAQDI-------------------- 143
NRH I D + H D+
Sbjct: 1328 NRHEIRRLDAHRETYVSLVSGLKNTIALNFYYTQHAESDVNPGDGSLLFWTDVAEDKINK 1387
Query: 144 --------------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
V +G+ EG+A DWI H+YW++S LN+IEV D NG++R+ L
Sbjct: 1388 GVLISNTVTIIEPIVTAGISTPEGIAVDWITQHLYWVESSLNQIEVADFNGSDRMTLVAG 1447
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWG-ENPRIERIGMDG--SNRSTIISTKIY----WPNG 242
+ PR + LDP G +FWTDW NPRIE+ M G S RS I WPNG
Sbjct: 1448 EMHSPRAIALDPRYG--LMFWTDWHVSNPRIEKCSMSGEESTRSVIFEVSSLMMSGWPNG 1505
Query: 243 LTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMD 302
LT+D R K+N+ ++YWID + I + +
Sbjct: 1506 LTIDYDAGRT-----------------KSNIYAG----RIYWIDAKSDS----IHTIDYN 1540
Query: 303 GSNASILVSGQLY--EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
G + ++ G Y A+ + +Y WTDW N + +GS+
Sbjct: 1541 GGDYREILRGNRYLVHPFAISVFGDHVY-----------WTDWRSNSIVRANKFNGSDPK 1589
Query: 361 TIIST 365
I T
Sbjct: 1590 VIERT 1594
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 159/384 (41%), Gaps = 72/384 (18%)
Query: 78 GYCSQMCTNTKG-SYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C G S +C C GY E N CKA + + + +I +
Sbjct: 1948 GGCSQLCLPMPGNSMVCKCTMGYDTEGTN--CKA--QDWVYWVDDRQRTI-----SRVKR 1998
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
D ++++V+ VEGLA DW+ G++YW + IEV +GT R VL + + + RG
Sbjct: 1999 DLSQREVIVNVGMGVEGLAVDWVAGNLYWTNDAKKVIEVSRLDGTQRYVLMHEGLNKLRG 2058
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ +DP G + +W + PRI R +DGS R T+I T I P GL +D V++ D
Sbjct: 2059 IAVDPVRG--YFYWAENHLQPRIHRARLDGSGRETLIETDIVNPTGLAVD-EEGVVFWCD 2115
Query: 257 SKLDFIDCKSLEIKTNVNYSTIFRK---------------LYWID-EGGNGVPLKIGKAN 300
L+ I+ +E+ VN + + R +YW D G L+ K+N
Sbjct: 2116 QGLNKIE--RVELTPRVNRTVVVRDNFTEDCRGLAVHGKYIYWTDVSSKEGSILRAKKSN 2173
Query: 301 MD-------------------------GSNASILVSGQLYEALAL--------DLENGML 327
D G+N G EAL L +G L
Sbjct: 2174 GDDLRFIKTGLGQEIRDIKIFDRIQQEGTNP--CAEGGGCEALCLYNGTDAVCRCPHGKL 2231
Query: 328 YYSTLKCTRWLFWTDWGENPRIERIGMDG-----SNRSTIISTKIYWPNGLTLDIATRRV 382
T KC + + + IE + ++G N++ + + + LT D +R
Sbjct: 2232 INGT-KCQSFDSFIAYSSVKAIETLHLEGDNPNAPNKAIMDEEHLRYVVALTYDYTGQRF 2290
Query: 383 YFADSKLDFIDFCNYDGTGRQQVI 406
+F+D I + GT + ++
Sbjct: 2291 FFSDILRGDIQSVGFKGTQFKVIV 2314
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 180/428 (42%), Gaps = 98/428 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNT---CHPTPLGAL------CT 54
+CV++ VC+ DC +G DEG C++ F + T C G L C
Sbjct: 3797 QCVSMNSVCNLYKDCVDGTDEG-----EICRNTFKVACTTVDDCREHEDGTLQCLDGQCV 3851
Query: 55 CPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH-------T 107
C G ++ + C+D NEC G C Q+CTNT GSY C C + ++ N+ T
Sbjct: 3852 CAEGFEIARATGKCEDKNECLIHGTCDQICTNTNGSYFCMCEDHFMKPRVNNVSAKQVST 3911
Query: 108 CKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD 167
CKA S +L+I + IL GL L H+
Sbjct: 3912 CKAEGLSP-YLLIGTENEIL-------------------GLSL-----------HVSVNG 3940
Query: 168 SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227
S+ +R + + ++ I +A +I G D SP F TD +
Sbjct: 3941 SQYSRQYPPENSESSNIRIAAMDILIGNG---DDSP---MAFITD--------------A 3980
Query: 228 NRSTIISTKIYWPNGLTLDIAT------RRVYFADSKLDFIDCKSLEIKTNVNYSTIFRK 281
+ I + L+LD A+ R V ++ F D ++E +++ + R+
Sbjct: 3981 HTGAIYKQSVL----LSLDTASINKRGERAVPLPLDRIHF-DGPAVEEPVSLSVDWVSRR 4035
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
LYW D + + ++++G+ + ++ L L ++ K L+W+
Sbjct: 4036 LYWADRRRGTIEM----SDLEGNKRTTVIGTNLQHIECL-------VFTPTK----LYWS 4080
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
G + IE +DGS+R+ ++S+++ WP+ + +D+ +Y+AD+K I+ DGT
Sbjct: 4081 RSGRSAAIESAWLDGSHRTVLVSSRLSWPSSVVVDVPNNHLYWADAKRKTINTVALDGTR 4140
Query: 402 RQQVILID 409
RQ V D
Sbjct: 4141 RQTVWTFD 4148
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 12/139 (8%)
Query: 148 LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDE-NGTNRIVLAKDNITQPRGMMLDPSPGTR 206
LD +GL YDW+ + Y+ D + RI VC G ++ P+ + +DP+
Sbjct: 355 LDSTQGLTYDWLARNWYFTDEKRERIFVCSSYTGICLTIINTRLKKLPKAITVDPT--KN 412
Query: 207 WLFWTDWGENPRIERIGMDGSNRSTII-STKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
++F+T WG+ ++ER +DG++R ++ S++ P+ LTLD A VY++DS L I
Sbjct: 413 FIFFTVWGDTAKLERAQLDGTHRRVLVSSSQFVHPSSLTLDYANEHVYWSDSYLGSI--- 469
Query: 266 SLEIKTNVNYSTIFRKLYW 284
V+YS RKL +
Sbjct: 470 -----FRVDYSGNRRKLIY 483
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI---------VLAKDNITQPRGMMLDP 201
VEGLA DW+ ++YW D L I V GT V + + PR + L P
Sbjct: 671 VEGLAVDWLANNLYWTDENLASISVARIGGTASPNYRRTLFSRVSGQVSFHNPRAIALAP 730
Query: 202 SPGTRWLFWTDWGENP-----RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +FWTDW P +I R MDG ++ + WPNGL++D A+ ++++ +
Sbjct: 731 RKGL--MFWTDWLPRPEPADAKIVRASMDGLQAEIWVTKMLQWPNGLSIDAASNKIFWCE 788
Query: 257 SKLDFIDCKSLEIK 270
+ D I+ ++ K
Sbjct: 789 AYQDRIEVVDMDNK 802
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 53/116 (45%), Gaps = 8/116 (6%)
Query: 5 CVNLTKVCDGKTDCPNGADEG------PGCDLAECKHKFGLCSNTCHPT--PLGALCTCP 56
C+ +CD + CP G DEG C + C F PT P C+C
Sbjct: 143 CIKFNLICDDQVHCPMGDDEGLFCRDSNPCRSSPCPRDFTDSGCIPAPTNSPFNRFCSCG 202
Query: 57 PGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN 112
G + + CQD++E G+C Q TN GSY CSC GY +DN TC AIN
Sbjct: 203 EGRYFNYSANLCQDLDESLYDGFCDQRTTNGNGSYTCSCANGYFGSHDNATCTAIN 258
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 116/270 (42%), Gaps = 43/270 (15%)
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG-----SNR 229
+C NGT+ + P G +++ + + + + IE + ++G N+
Sbjct: 2214 LCLYNGTDAVCRC------PHGKLINGTKCQSFDSFIAYSSVKAIETLHLEGDNPNAPNK 2267
Query: 230 STIISTKIYWPNGLTLDIATRRVYFAD---SKLDFIDCKSLEIKTNVN---------YST 277
+ + + + LT D +R +F+D + + K + K V Y
Sbjct: 2268 AIMDEEHLRYVVALTYDYTGQRFFFSDILRGDIQSVGFKGTQFKVIVKSVGSAEGLAYDP 2327
Query: 278 IFRKLYWIDEGGNGVP---LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
F LYW + + + I + N + L S A+AL + C
Sbjct: 2328 YFDDLYWTSYTNSSISRISVNIHQENPVATKIIQLGSEDKPRAIALHI-----------C 2376
Query: 335 TRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
+ +FWT+W + I ++G + I++T+I PNGLT+D + ++Y++D++ D ++
Sbjct: 2377 SSRMFWTNWNAGSASIMSSYVNGRDFKAIVTTRIQTPNGLTIDYSANKLYWSDARDDKVE 2436
Query: 394 FCNYDGTGRQQVIL-----IDLMVEFTNDL 418
CN++G+ R ++ I + F NDL
Sbjct: 2437 RCNFNGSDRVVIVARSAHHIFGLALFQNDL 2466
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 93/224 (41%), Gaps = 53/224 (23%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYW---LDSRLNRIEV--CDENG 180
IL D++ G ++V + EGLAYD +YW +S ++RI V EN
Sbjct: 2295 ILRGDIQSVGFKGTQFKVIVKSVGSAEGLAYDPYFDDLYWTSYTNSSISRISVNIHQENP 2354
Query: 181 TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYW 239
++ + +PR + L + +FWT+W + I ++G + I++T+I
Sbjct: 2355 VATKIIQLGSEDKPRAIALHIC--SSRMFWTNWNAGSASIMSSYVNGRDFKAIVTTRIQT 2412
Query: 240 PNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKA 299
PNGLT+D + ++Y++D++ D K+ +
Sbjct: 2413 PNGLTIDYSANKLYWSDARDD----------------------------------KVERC 2438
Query: 300 NMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
N +GS+ ++V+ + L L LY WTDW
Sbjct: 2439 NFNGSDRVVIVARSAHHIFGLALFQNDLY-----------WTDW 2471
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 102/242 (42%), Gaps = 36/242 (14%)
Query: 179 NGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIG-MDGSNRSTIISTKI 237
N +V A + + RGM ++ + R +F E I +D ++ +I
Sbjct: 591 NEEEYLVYANSQLGEIRGMNIEVNDTQRDIF----------EPISSLDKPVAVDVLHDQI 640
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL-KI 296
++ + IA+R K FI+ + L + + LYW DE + + +I
Sbjct: 641 FYSDSKGKRIASRHRKRG-LKETFIE-EDLGNVEGLAVDWLANNLYWTDENLASISVARI 698
Query: 297 GKANMDGSNASIL--VSGQLY----EALALDLENGMLYYSTLKCTRWLFWTDWGENP--- 347
G ++ VSGQ+ A+AL G++ FWTDW P
Sbjct: 699 GGTASPNYRRTLFSRVSGQVSFHNPRAIALAPRKGLM-----------FWTDWLPRPEPA 747
Query: 348 --RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+I R MDG ++ + WPNGL++D A+ ++++ ++ D I+ + D + V
Sbjct: 748 DAKIVRASMDGLQAEIWVTKMLQWPNGLSIDAASNKIFWCEAYQDRIEVVDMDNKDDRTV 807
Query: 406 IL 407
+L
Sbjct: 808 LL 809
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 143/361 (39%), Gaps = 80/361 (22%)
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYW--LDSR--LNRIEVCDENGTNRIVLAKD----N 190
+ I+ SGL+ G A DWI ++Y+ DS+ ++ I V NG R VL
Sbjct: 1731 HVETIIDSGLEKCRGFAIDWISNNMYFSNHDSQKGVSTISVAHLNGAFRTVLLSSETDLQ 1790
Query: 191 ITQPRGMMLDPSPGTRWLFWTD--WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248
+ P +++DP G ++W + N I MDGS +++S + + L
Sbjct: 1791 LRDPIALIVDPVMGK--MYWANNVTAANRGIFSANMDGSQPHSLLSGRPI----IALSRD 1844
Query: 249 TRRVYFADSKLD--------FIDCKSLEIKTNVNYS-------TIFRKLYWIDEGGNGVP 293
+R+++ + D +C S+E+ NYS + L ++ GG
Sbjct: 1845 DQRLWWIEKGTDAPAVGSCKLPNCSSVEMLAG-NYSRSELSDIAVHADLVYLGFGGREPS 1903
Query: 294 LK-IGKANMDGSNASI-------LVSGQLYE-----------------ALALDLE-NGML 327
+K I K+ G+ A++ + S ++YE L L + N M+
Sbjct: 1904 IKTISKSGGAGNKATLFRDLRGAMQSLKIYERKRQGTNACADGNGGCSQLCLPMPGNSMV 1963
Query: 328 YYSTL---------KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 378
T+ K W++W D I R+ D S R I++ + GL +D
Sbjct: 1964 CKCTMGYDTEGTNCKAQDWVYWVD-DRQRTISRVKRDLSQREVIVNVGM-GVEGLAVDWV 2021
Query: 379 TRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYY 438
+Y+ + I+ DGT R LM E N L G +A+D G Y+
Sbjct: 2022 AGNLYWTNDAKKVIEVSRLDGTQRYV-----LMHEGLNKLRG------IAVDPVRGYFYW 2070
Query: 439 S 439
+
Sbjct: 2071 A 2071
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 13/112 (11%)
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIIST-KIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
++F+T WG+ ++ER +DG++R ++S+ + P+ LTLD A VY++DS L I
Sbjct: 413 FIFFTVWGDTAKLERAQLDGTHRRVLVSSSQFVHPSSLTLDYANEHVYWSDSYLGSIFRV 472
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
+Y G R+++I L V+ G+ ++A+ EN LY ST + +K
Sbjct: 473 DYSGN-RRKLIYNQLWVK---------GIQSMAI-FEN-YLYASTINGKQIK 512
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 161/452 (35%), Gaps = 118/452 (26%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV L +CDG+ DC NG DE C+ C + C+NT C P E +
Sbjct: 3718 ECVPLAWLCDGEKDCRNGYDETDTVCNSHVCVPGYFSCNNT----------RCVPFEHIC 3767
Query: 63 NDSVTCQDM---NECEQP----------GYCSQM-------------------CTNTKGS 90
++ C DM ++C QP G C M C NT
Sbjct: 3768 DEHNQCGDMSDESQCNQPCQVDEFRCASGQCVSMNSVCNLYKDCVDGTDEGEICRNTFKV 3827
Query: 91 YI--------------------CSCNEGYVLEYDNHTCKAIN----HSAAFLIISNRHSI 126
C C EG+ + C+ N H I +N +
Sbjct: 3828 ACTTVDDCREHEDGTLQCLDGQCVCAEGFEIARATGKCEDKNECLIHGTCDQICTNTNGS 3887
Query: 127 LVADLEEKGKDHRAQDIVVSGLDL--VEGLA-YDWIGG---------HIYWLDSRLNRIE 174
E+ R ++ + EGL+ Y IG H+ S+ +R
Sbjct: 3888 YFCMCEDHFMKPRVNNVSAKQVSTCKAEGLSPYLLIGTENEILGLSLHVSVNGSQYSRQY 3947
Query: 175 VCDENGTNRIVLAKDNI------TQPRGMMLDPSPGTRW----LFWTDWGE-NPRIERIG 223
+ + ++ I +A +I P + D G + L D N R ER
Sbjct: 3948 PPENSESSNIRIAAMDILIGNGDDSPMAFITDAHTGAIYKQSVLLSLDTASINKRGERAV 4007
Query: 224 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE-------IKTNVNYS 276
+R + P L++D +RR+Y+AD + I+ LE I TN+ +
Sbjct: 4008 PLPLDRIHFDGPAVEEPVSLSVDWVSRRLYWADRRRGTIEMSDLEGNKRTTVIGTNLQHI 4067
Query: 277 TIF----RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYS 330
KLYW G + I A +DGS+ ++LVS +L ++ +D+ N LY
Sbjct: 4068 ECLVFTPTKLYWSRSGRSAA---IESAWLDGSHRTVLVSSRLSWPSSVVVDVPNNHLY-- 4122
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
W D + I + +DG+ R T+
Sbjct: 4123 ---------WAD-AKRKTINTVALDGTRRQTV 4144
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 27/144 (18%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLF 339
LYW ++ + + + +DG+ +L+ L +A+D G Y
Sbjct: 2025 LYWTNDAKKVIEV----SRLDGTQRYVLMHEGLNKLRGIAVDPVRGYFY----------- 2069
Query: 340 WTDWGEN---PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
W EN PRI R +DGS R T+I T I P GL +D V++ D L+ I+
Sbjct: 2070 ---WAENHLQPRIHRARLDGSGRETLIETDIVNPTGLAVD-EEGVVFWCDQGLNKIERVE 2125
Query: 397 YDGTGRQQVILIDLMVEFTNDLMG 420
+ V++ D FT D G
Sbjct: 2126 LTPRVNRTVVVRD---NFTEDCRG 2146
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 72 NECEQPGY--CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI 111
N C+QP Y CS++C + +CSC++G L DN TC A+
Sbjct: 884 NGCKQPSYGGCSELCLSNPTGTVCSCSDGKQLNADNKTCSAV 925
>gi|348521570|ref|XP_003448299.1| PREDICTED: low-density lipoprotein receptor-related protein 1-like
[Oreochromis niloticus]
Length = 4622
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 130/405 (32%), Positives = 192/405 (47%), Gaps = 92/405 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+N T +CD DC +G+DE C + EC K C+ C +G C C PG L
Sbjct: 2998 KCLNETLLCDRNDDCGDGSDE-LNCFINECLNSKLSGCTQLCDDLKIGFKCRCHPGFQLK 3056
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D TC D++EC CSQ C NT GS+ C C +G+ L ++ T CK+ + +LI +
Sbjct: 3057 RDGKTCVDIDECTTTYPCSQRCINTHGSFHCLCVDGFELSPNDPTVCKSTSDEEPYLIFA 3116
Query: 122 NRHSILVADLE-------EKGKD-------HRAQDIVV---------------------- 145
NR+ + +L+ ++G + H A+ ++
Sbjct: 3117 NRYYLRKLNLDGTNYTLIKQGLNNAVALDFHYAEQMIYWTDVTTQGSMIRRMHMNGSNME 3176
Query: 146 ----SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+ L +GLA DW+GG++YW D + IEV NG R VL + +PR + LD
Sbjct: 3177 VLHRTSLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVNSGLREPRAVALDV 3236
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+W+DWG+NP I RIGMDG+NRS II KI WPNGLTLD R+Y+AD++ D+
Sbjct: 3237 RYG--YLYWSDWGDNPHIGRIGMDGTNRSVIIEDKITWPNGLTLDFINDRIYWADAREDY 3294
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DG N ++S + A+
Sbjct: 3295 IE----------------------------------FASLDGKNRHTVLSQDIPHIFAMT 3320
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD-GSNRSTIIST 365
L +++WTDW E I R G+N++T+IST
Sbjct: 3321 LFE-----------EYIYWTDW-ETKSINRAHKSLGTNKTTLIST 3353
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 146/304 (48%), Gaps = 51/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DCP+G+DE CDL C G CS+ C P G +C+CP G L
Sbjct: 1244 CLPPEKLCDGTDDCPDGSDEKL-CDL--CSVGNGGCSHNCSIIPGEGFMCSCPLGMELGA 1300
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+ LE D +CK+ + F+I SNR
Sbjct: 1301 DNKTCQIQSFCAKHLKCSQKCEQEKSSVKCSCYEGWELESDMESCKSTDPFKPFIIFSNR 1360
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1361 HEIRRIDLHKGEFSVLVPGLRNTIALDFHLNQSTLYWTDVVEDKIYRGKLSENGALTSFE 1420
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L + PR + LDP
Sbjct: 1421 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMRTTLLAGEVEHPRAIALDP 1480
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G R TI + WPNGLT+D RR+ + D++
Sbjct: 1481 RDGI--LFWTDWDASLPRIEAASMSGEGRRTIHRETGSGGWPNGLTVDYMERRIVWIDAR 1538
Query: 259 LDFI 262
D I
Sbjct: 1539 SDAI 1542
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 160/328 (48%), Gaps = 55/328 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C++ +K C+G DC +G DEGP C C C T G C C G ++ D
Sbjct: 176 CLHASKFCNGVPDCTDGWDEGPHCRAKAPDCASHGCEVGCAVTHDGPRCYCGDGYEVAAD 235
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLIIS 121
C+D NEC G CSQ CTNT+GSY CSC EGY+L+ DN +CKA N L+I+
Sbjct: 236 GKKCKDFNECGVYGTCSQTCTNTEGSYTCSCVEGYLLQPDNRSCKAKNEPVDRLPVLLIA 295
Query: 122 NRHSILVADLEEKG--------KDHRAQDIVVS--------------------------- 146
N ++I L K A D + +
Sbjct: 296 NLNNIRCTSLSGSATRVPSIATKQTMAMDFIYAEETVCWIDVGDTPAATQLKCASIQDLK 355
Query: 147 ------------GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
L VE +A DW+ G+ Y++D +R+ VC++NG + L + P
Sbjct: 356 SVSNNRTINISLSLHHVEQMAIDWLTGNFYFVDDVDDRVFVCNKNGKTCVTLLDQELYNP 415
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
+G+ LDP G +F+TD+G PR+ER MDG NR+ ++ +KI +P+G+TLD+ R VY+
Sbjct: 416 KGIALDPVMGK--VFFTDYGSTPRVERCDMDGQNRTKLVDSKIVFPHGITLDLVNRLVYW 473
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
AD+ LD+I+ E K N TI + L
Sbjct: 474 ADAYLDYIEVVDYEGK---NRHTIIQGL 498
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 144/320 (45%), Gaps = 66/320 (20%)
Query: 4 RCVNLTKVCDGKTDCPN-GADE---GPGCDLAECKHKFGLCSN----TCHPTPLGALCTC 55
RC++ C+ DC + G+DE L +C+ C + C + C+C
Sbjct: 3832 RCISSNLRCNFFNDCEDYGSDEINCKTDTKLNDCRSNTTQCGDGDEAHCVTNGTDSFCSC 3891
Query: 56 PPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA 115
PG TC D NEC Q G CS +C NTKGSY CSC++ + N TCKA N ++
Sbjct: 3892 KPG-FQKIGHHTCGDKNECLQFGVCSHICNNTKGSYKCSCHKYFTRI--NDTCKADNMNS 3948
Query: 116 AFLII----------------------------------------------SNRHSILVA 129
+ I+ +N H+ ++
Sbjct: 3949 SRQILYIADDNEIRSLDPGMPNWRYEQTFQGDASVRIDAMDLHVKTNRIFWTNWHTGRIS 4008
Query: 130 DLEEKG-------KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
E G + + Q +++ L + G+A DW+ G++YW DS + IEV +G +
Sbjct: 4009 SYELPGSSSSSASRINNLQVMLIKDLKMPRGIAVDWVAGNLYWTDSGRDVIEVAQLSGQH 4068
Query: 183 RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 242
L I +P ++++P GT ++W DWG +P+IE MDG+ R T++ I WP G
Sbjct: 4069 SKTLIYGMIDEPYAIVVNPQRGT--MYWADWGNHPKIETAAMDGTLRQTLVQENIQWPTG 4126
Query: 243 LTLDIATRRVYFADSKLDFI 262
L +D R+Y+AD+KL I
Sbjct: 4127 LAVDYFNERLYWADAKLSVI 4146
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 134/306 (43%), Gaps = 67/306 (21%)
Query: 78 GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + C C GY L+ +C+ + +FL+ S I L+ K
Sbjct: 1937 GDCSQLCLPTSPTTRSCMCTAGYSLKTGQQSCEGM---GSFLLYSVHEGIRGIPLDPADK 1993
Query: 137 ----------------DHRAQ-------------------------DIVVSGLDLVEGLA 155
D A+ D+V +G+ VEG+
Sbjct: 1994 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIT 2053
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 2054 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPVKG--YLFWTEWGQ 2111
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DGS R +++ I WPNG+++D +Y+ D++ D I+ +LE N
Sbjct: 2112 YPRIERSRLDGSQRLVMVNASISWPNGISIDYEEGLLYWCDARTDKIERINLETGKNREL 2171
Query: 273 ---------VNYSTIFRKLYWIDE-GGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
S +YW D NG I + N D + ++ QL + + L
Sbjct: 2172 VLGNNNMDMFAVSVFEEYIYWSDRTHANG---SIKRGNKDNATDAV----QLRTGIGVQL 2224
Query: 323 ENGMLY 328
++ ++
Sbjct: 2225 KDIKVF 2230
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 56/242 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA-DLE 132
+ G CS +C +N + C C G+ L D +CK +H + R ++ D+
Sbjct: 575 KAGGCSDICLLSNNHKTRTCRCRSGFSLGSDGKSCKKPDHELFLVYGKGRPGVIRGMDMN 634
Query: 133 EKGKDH-----------RAQD------------------------------IVVSGLDLV 151
K D RA D I+ G+ V
Sbjct: 635 AKVPDEYMIPIENLMNPRALDFHATTEFIYFADATSYIIGRQKIDGTDRDVILKDGIHTV 694
Query: 152 EGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
EG+A DW+G ++YW D + + ++ R +L + ++ PR +++DP G W+
Sbjct: 695 EGIAVDWMGNNLYWTDDGPKKTISVARLEKASRTRKILIEGKMSHPRAIVVDPQHG--WM 752
Query: 209 FWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLDF 261
+WTDW E+P +I++ MDGS+ +++K + WPNGL+LDI +Y+ D+ D
Sbjct: 753 YWTDWEEDPTESNRGKIKKAWMDGSHHQVFLTSKTVLWPNGLSLDIPQGILYWVDAYYDR 812
Query: 262 ID 263
I+
Sbjct: 813 IE 814
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 131/330 (39%), Gaps = 58/330 (17%)
Query: 80 CSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH 138
CS +C N ++ C+C L+ D HTCK S FL+ + + I D++ ++
Sbjct: 1633 CSHLCLINFNQTFSCACPHLMKLQPDKHTCK---ESRKFLLYARQIEIRGVDIDNPYYNY 1689
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
V +D V + YD + IYW D R I+ NGT + ++ G+
Sbjct: 1690 IIS-FTVPDIDNVTVVDYDAVEHRIYWSDVRTQTIKRAFINGTGVETVVSADLPNAHGLA 1748
Query: 199 LDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+D +R LFWT + N + I +DGS ++ +I
Sbjct: 1749 VDWV--SRNLFWTSYDANKKQINVARLDGSFKNAVI------------------------ 1782
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE- 316
+ L+ + + KLYW D G+ + + ANMDGSN + L + Q
Sbjct: 1783 -------QGLDKPHCLVVHPLLGKLYWTD--GDSISM----ANMDGSNRTTLFTDQKGPV 1829
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 376
L++D E LY W G N I R +DGS + K L
Sbjct: 1830 GLSIDYEKEQLY-----------WISSG-NSTINRCQLDGSKLEILEGVKGKLTKATALA 1877
Query: 377 IATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I ++++AD D I C+ G +V+
Sbjct: 1878 IMGDKLWWADQGTDQIGTCDKKDGGNWKVL 1907
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 96/251 (38%), Gaps = 59/251 (23%)
Query: 100 VLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWI 159
L +D H A + S+ H + + + G D + IVV + VEGLAY
Sbjct: 2320 ALSFDYH--GGGGRGANRIFFSDIHFGNIQQINDDGTDRK---IVVENVGSVEGLAYHRG 2374
Query: 160 GGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT------QPRGMMLDPSPGTRWLFWTDW 213
+YW + I + + + ++ + PR +LD +FWT+W
Sbjct: 2375 WDTLYWTSYTTSTITRHTVDQSRSVAYNRNTVVTMSGEDHPRAFVLDEC--QDLMFWTNW 2432
Query: 214 GEN-PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN 272
E P I R ++G+N II + I PNGL +D ++YF+D+ LD
Sbjct: 2433 NEQAPSIMRASLNGANVIVIIGSDIKTPNGLAIDHRAEKLYFSDATLD------------ 2480
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
KI + DGSN +L+ + G+ Y
Sbjct: 2481 ----------------------KIERCEYDGSNRYVLLKNEPVHPF------GLAVYGD- 2511
Query: 333 KCTRWLFWTDW 343
++FWTDW
Sbjct: 2512 ----YIFWTDW 2518
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 333 KCTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E P I R ++G+N II + I PNGL +D ++YF+D+ LD
Sbjct: 2422 ECQDLMFWTNWNEQAPSIMRASLNGANVIVIIGSDIKTPNGLAIDHRAEKLYFSDATLDK 2481
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
I+ C YDG+ R ++ + + F + GD
Sbjct: 2482 IERCEYDGSNRYVLLKNEPVHPFGLAVYGD 2511
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 128/350 (36%), Gaps = 91/350 (26%)
Query: 121 SNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG 180
+N+ I VA L D ++ V+ GLD L + G +YW D + I + + +G
Sbjct: 1763 ANKKQINVARL-----DGSFKNAVIQGLDKPHCLVVHPLLGKLYWTDG--DSISMANMDG 1815
Query: 181 TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS---------- 230
+NR L D P G+ +D L+W G N I R +DGS
Sbjct: 1816 SNRTTLFTDQ-KGPVGLSIDYE--KEQLYWISSG-NSTINRCQLDGSKLEILEGVKGKLT 1871
Query: 231 -----TIISTKIYWPNGLTLDIAT---------------------RRVYFADSKLDFI-- 262
I+ K++W + T I T R+Y D + +
Sbjct: 1872 KATALAIMGDKLWWADQGTDQIGTCDKKDGGNWKVLRNNTSPMMHMRIYDEDVQKAGVNL 1931
Query: 263 ------DCKSLEIKTN---------VNYSTIFRK----------LYWIDEGGNGVPLKIG 297
DC L + T+ YS + LY + EG G+PL
Sbjct: 1932 CSNNNGDCSQLCLPTSPTTRSCMCTAGYSLKTGQQSCEGMGSFLLYSVHEGIRGIPLDPA 1991
Query: 298 KANMDGSNASILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG 356
D S+A + VSG L + EN +Y W D G + I R D
Sbjct: 1992 ----DKSDALVPVSGTSLAVGIDFHAENDTIY-----------WVDMGLS-TISRAKRDQ 2035
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ R +++ I G+T+D +Y+ D D I+ +G+ R VI
Sbjct: 2036 TWREDVVTNGIGRVEGITVDWIAGNIYWTDQGFDVIEVARLNGSFRYVVI 2085
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 22/146 (15%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DG+N +++ G L A+ALD +Y+ + ++WTD + I R+ M+G
Sbjct: 3123 KLNLDGTNYTLIKQG-LNNAVALDF-----HYAE----QMIYWTDVTTQGSMIRRMHMNG 3172
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R +L++
Sbjct: 3173 SNMEVLHRTSLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYR--TVLVN------- 3223
Query: 417 DLMGDNGVPALALDLENGMLYYSTEG 442
G A+ALD+ G LY+S G
Sbjct: 3224 --SGLREPRAVALDVRYGYLYWSDWG 3247
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE-RIG 353
+I + ++ S+LV G L +ALD L STL +WTD E+ ++
Sbjct: 1362 EIRRIDLHKGEFSVLVPG-LRNTIALDFH---LNQSTL------YWTDVVEDKIYRGKLS 1411
Query: 354 MDGSNRS--TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
+G+ S +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1412 ENGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMR--------- 1462
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L G+ P A+ALD +G+L+++
Sbjct: 1463 ---TTLLAGEVEHPRAIALDPRDGILFWT 1488
>gi|357627556|gb|EHJ77209.1| putative low-density lipoprotein receptor [Danaus plexippus]
Length = 1915
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 120/333 (36%), Positives = 159/333 (47%), Gaps = 54/333 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLG-ALCTCPPGEILSN 63
CVN VCDG DCP G DE +C+ C C T G C CP G +L N
Sbjct: 425 CVNRKHVCDGMKDCPQGDDEEKCPTKRKCRPD-DKCERQCITTFDGFPACACPIGYLLDN 483
Query: 64 DSVTCQDMNEC--EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL--- 118
+ +CQD++EC EQ CSQ C+NT GSY+C C GYVL D +CKA S L
Sbjct: 484 NGYSCQDIDECMYEQDPVCSQTCSNTLGSYMCGCMTGYVLRPDARSCKATGESPTLLFSN 543
Query: 119 ----------------IISNRHSILVADLEEKGK------------------DHRAQDIV 144
I+ H + D K + D+V
Sbjct: 544 GVGIRQVWLTGENYMSILKGLHKAMALDYHYKKNLVFWTENNMRVIRVAPLDSNNMTDVV 603
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
G++ GLA DWI ++W DS R+EV +G+ R VLA ++ +PR + + PG
Sbjct: 604 RWGIETPGGLAVDWIHDLLFWTDSGTRRVEVATLDGSQRAVLAASDVDKPRAIAV--HPG 661
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
+FWTDWG NP+IER MDG NR +II I+WPNGLT+D +Y+AD+K I+
Sbjct: 662 DALVFWTDWGPNPKIERANMDGDNRKSIIVHNIFWPNGLTIDYTESTIYWADAKHHVIEK 721
Query: 265 KS---LEIKTNVNYS-------TIFR-KLYWID 286
S L+ K +N T+F +YW D
Sbjct: 722 ASFNGLDRKRIINKGLPHPFALTLFEDAIYWTD 754
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 135/333 (40%), Gaps = 89/333 (26%)
Query: 72 NECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA--------------------- 110
N C G CS MC C C G+ L D TC+
Sbjct: 797 NRCVNNGGCSHMCLPASSERTCRCPVGFNLHSDGRTCEETPEKLLLYAHRKDIRLKQLNP 856
Query: 111 ---------------INHSAAFLIISNRHSILVADLEE----KGKDHRAQDIVVSGLDLV 151
I + A N +SI D+E+ K + + ++ G +L+
Sbjct: 857 RKHMDSLDMVIPVENIKSAVALDWDHNSNSIFWTDVEKDTINKAFLNGSHQTIIVGSNLI 916
Query: 152 E--GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
GLAYDW+ +YW D+ NRIEV + NG+ R +LA +NI +PR ++LDP G ++
Sbjct: 917 SPAGLAYDWLTNKLYWTDAGTNRIEVANANGSMRTLLAWENIDKPRDIVLDPIGGI--MY 974
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEI 269
W+DWG +P IER MDG NR +I + WPNGL LD+ +R+Y+ D
Sbjct: 975 WSDWGSSPCIERADMDGGNRQRLIFGDMTWPNGLALDLPNKRIYWTD------------- 1021
Query: 270 KTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
GGN I AN+DG+ ++L+ L LDL
Sbjct: 1022 ------------------GGNRT---IEYANLDGTGRTVLIGQDLTHPFGLDLYGDE--- 1057
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
+FWTDW G R T+
Sbjct: 1058 --------VFWTDWNTQSIQAANKYTGKQRRTL 1082
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 129/279 (46%), Gaps = 39/279 (13%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTN-----T 87
C G CS+ C +P G C CP G + N+S ++N P C + N
Sbjct: 1409 CGKNNGGCSHLCLRSPQGYTCACPTGLLFKNES----ELN----PKTCKKHPDNFLVFAA 1460
Query: 88 KGSYICSCNEGYVLEYD-NHTCKAINHSAAFLIISNRHSILVADL---------EEKGKD 137
+GS I + ++D K I +S A R I D+ E D
Sbjct: 1461 RGS-IALISLDTPEQWDITLPVKDIQNSVAVDYHWERKLIFFTDVYHNEIRSIDMENMSD 1519
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
R IV +GLD GL DWI +IYW D+ +EV +G++R L +T+PR +
Sbjct: 1520 SRV--IVNTGLDTPNGLGVDWIANNIYWTDNDFKVVEVARLDGSSRKTLIT-GLTEPRAL 1576
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
L P+ G +L+W+DWGE+P IER +DGS R I++ + +PNG+T+D RR+Y+ D+
Sbjct: 1577 ALFPAKG--FLYWSDWGESPNIERASLDGSQRRIIVNHDLGFPNGITIDYKDRRLYWTDA 1634
Query: 258 KLDFIDCKSL----------EIKTNVNYSTIFRKLYWID 286
D ID L E K + +YW D
Sbjct: 1635 LKDRIDTSDLNGQHRVQLIPEAKNPFGMTQFNNYIYWTD 1673
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 126/281 (44%), Gaps = 47/281 (16%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY- 91
C + G CS+ C P+G C CP G LSND ++CTN ++
Sbjct: 1106 CSNNNGGCSHLCLLKPMGRSCACPIGIKLSNDG----------------RICTNGPINFL 1149
Query: 92 ---------ICSCNEGYVLEY-------DNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
I S + Y+++ N ++ + ++ + ++G
Sbjct: 1150 IFAHRVDIRIVSLDVPYLVDVVLPLPALKNALGVDVDQRTGLIYWTDTGERKIKRANKEG 1209
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
H+ + I+ GL +G+A D G IYW D N IEV + NGTNR VL + PR
Sbjct: 1210 --HQNETIIGRGLHTADGIAIDSAGRKIYWTDGGRNSIEVAELNGTNRKVLVWTGLDSPR 1267
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ L G ++FW+DWG + +IER MDG NR I+ I WPNGL +D R+Y+
Sbjct: 1268 AIALHYDYG--FMFWSDWGTSAKIERADMDGKNRRIIVDNNIKWPNGLAIDRIESRLYWN 1325
Query: 256 DSKLDFIDCKSLE------IKTNVNYS----TIFRKLYWID 286
D+K+ I+ + + T V Y + + +YW D
Sbjct: 1326 DAKVLTIESSNFNGHDRRTLLTQVPYPYGIVIVGQHIYWTD 1366
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 133/331 (40%), Gaps = 97/331 (29%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C C+C G L D C N FLI ++R
Sbjct: 1111 GGCSHLCLLKPMGRSCACPIGIKLSNDGRIC--TNGPINFLIFAHR-------------- 1154
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
DI + LD+ Y +D +VL + G+
Sbjct: 1155 ---VDIRIVSLDVP------------YLVD----------------VVLPLPALKNALGV 1183
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+D G ++WTD GE +I+R +G TII ++ +G+ +D A R
Sbjct: 1184 DVDQRTGL--IYWTDTGER-KIKRANKEGHQNETIIGRGLHTADGIAIDSAGR------- 1233
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--Y 315
K+YW D G N + + A ++G+N +LV L
Sbjct: 1234 -----------------------KIYWTDGGRNSIEV----AELNGTNRKVLVWTGLDSP 1266
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
A+AL + G ++FW+DWG + +IER MDG NR I+ I WPNGL +
Sbjct: 1267 RAIALHYDYG-----------FMFWSDWGTSAKIERADMDGKNRRIIVDNNIKWPNGLAI 1315
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
D R+Y+ D+K+ I+ N++G R+ ++
Sbjct: 1316 DRIESRLYWNDAKVLTIESSNFNGHDRRTLL 1346
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 137/334 (41%), Gaps = 99/334 (29%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVL----EYDNHTCKAINHSAAFLIISNRHSILVADLEE 133
G CS +C + Y C+C G + E + TCK H FL+ + R SI + L+
Sbjct: 1414 GGCSHLCLRSPQGYTCACPTGLLFKNESELNPKTCK--KHPDNFLVFAARGSIALISLDT 1471
Query: 134 KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
+ DI + D+ +A D+ +W
Sbjct: 1472 PEQ----WDITLPVKDIQNSVAVDY-----HW---------------------------- 1494
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG-SNRSTIISTKIYWPNGLTLDIATRRV 252
+ +F+TD N I I M+ S+ I++T + PNGL +D +
Sbjct: 1495 ----------ERKLIFFTDVYHN-EIRSIDMENMSDSRVIVNTGLDTPNGLGVDWIANNI 1543
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+ D+ D K +E+ A +DGS+ L++G
Sbjct: 1544 YWTDN-----DFKVVEV-----------------------------ARLDGSSRKTLITG 1569
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
L E AL L +L+W+DWGE+P IER +DGS R I++ + +PNG
Sbjct: 1570 -LTEPRALAL---------FPAKGFLYWSDWGESPNIERASLDGSQRRIIVNHDLGFPNG 1619
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+T+D RR+Y+ D+ D ID + +G R Q+I
Sbjct: 1620 ITIDYKDRRLYWTDALKDRIDTSDLNGQHRVQLI 1653
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/321 (19%), Positives = 128/321 (39%), Gaps = 45/321 (14%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ I+V + GL D+ IYW D++ + IE NG +R + + P + L
Sbjct: 687 KSIIVHNIFWPNGLTIDYTESTIYWADAKHHVIEKASFNGLDRKRIINKGLPHPFALTLF 746
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
++WTDW I + + +Y P + R+ + + ++
Sbjct: 747 EDA----IYWTDW-HTKSISTVNKKTGMGMQTVHASLYVPMDIQSFHPLRQRSYKNRCVN 801
Query: 261 FIDCKSLEIKTNVNYS---TIFRKLYWIDEGGNGVPLKI---------------GKANMD 302
C + + + + + L+ P K+ + +MD
Sbjct: 802 NGGCSHMCLPASSERTCRCPVGFNLHSDGRTCEETPEKLLLYAHRKDIRLKQLNPRKHMD 861
Query: 303 GSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
+ I V + A+ALD ++ + +FWTD E I + ++GS+++ I
Sbjct: 862 SLDMVIPVE-NIKSAVALDWDHN---------SNSIFWTD-VEKDTINKAFLNGSHQTII 910
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+ + + P GL D T ++Y+ D+ + I+ N +G+ R +L ++ D++
Sbjct: 911 VGSNLISPAGLAYDWLTNKLYWTDAGTNRIEVANANGSMR--TLLAWENIDKPRDIV--- 965
Query: 423 GVPALALDLENGMLYYSTEGA 443
LD G++Y+S G+
Sbjct: 966 ------LDPIGGIMYWSDWGS 980
>gi|405970919|gb|EKC35782.1| Low-density lipoprotein receptor-related protein 1B [Crassostrea
gigas]
Length = 2587
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 140/456 (30%), Positives = 191/456 (41%), Gaps = 105/456 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGA-----LCTCPPG 58
RC++ K+CDG DC + +DE GC+ + CS+ C P P G +C C
Sbjct: 682 RCISPDKMCDGNDDCSDKSDEN-GCNPVNVSCRNHSCSDVCRPAPPGLVKQLYICLCNES 740
Query: 59 EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL 118
LS D+ TCQ N C+ G C Q C + C C+EG+ LE D TC+ ++ +L
Sbjct: 741 RDLSRDNRTCQPTNICQSWGICQQTCEKLPQGHKCGCHEGFHLEPDGFTCRPLDPEPEYL 800
Query: 119 IISNRHSILVADLEE------------------------------------KGKDH---- 138
I SNRH + DL +GK
Sbjct: 801 IFSNRHEMRSVDLSNHNYAALVSGLHNTVALDFYYNKSFIFWTDVADDKIFRGKLQGNAL 860
Query: 139 -RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+ IV GL EGLA DWIG IYW++S+L +IEV NG NR L N+ PR +
Sbjct: 861 TDIEPIVDIGLATTEGLAVDWIGEKIYWVESKLYQIEVAGINGQNRTTLIAGNMVSPRAI 920
Query: 198 MLDPSPGTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTKIY----WPNGLTLDIATRRV 252
+LDP G+ LFWTDW +NPRIE M G NR I + WPNGLT+D
Sbjct: 921 VLDPRYGS--LFWTDWDTKNPRIETCSMAGENRHIIFHIRGIVEGGWPNGLTVDYD---- 974
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
F +LYWID + + +I G
Sbjct: 975 --------------------------FERLYWIDARSDSL-------------HTITYEG 995
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
Q + + LD EN ++ +++WTDWG N + DGSN + I T N
Sbjct: 996 QDHRLVLLDKENIRHPFALTMFGSYVYWTDWGINAIVSANKFDGSNVTVIKRT-----NT 1050
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
DI +VY +L + + C + + LI
Sbjct: 1051 QPFDI---QVYHPKRQLPWRNPCAVNNGNCSHLCLI 1083
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 26/201 (12%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC------KHK--------FGLCSNTCHPTPLG 50
C+N ++VCDG DC + DE C++ EC K K + C + C +G
Sbjct: 2305 CINESQVCDGHDDCGDNTDEASNCNVNECTLMELDKGKAIKNNGTYYKECQHDCTEKKIG 2364
Query: 51 ALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110
C C G L+ D +C D++EC+ CS C NT GSY C C +G+ L D C+
Sbjct: 2365 YECVCNEGYELAPDKHSCTDVDECKTLYPCSHFCINTIGSYRCECAKGFHL-VDGKNCQV 2423
Query: 111 INHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD--- 167
+LI++N + ++ G Q +V++ L+ + +D+ IYW +
Sbjct: 2424 TGSVKPYLILAN--GFYLRNISFLGH----QSLVLNDLNNAVAIDFDYQEEMIYWSEITN 2477
Query: 168 --SRLNRIEVCDENGTNRIVL 186
S+++R+ + D ++ V+
Sbjct: 2478 SMSKISRLNLTDHKVSSIAVV 2498
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 100/455 (21%), Positives = 177/455 (38%), Gaps = 104/455 (22%)
Query: 59 EILSNDSVTCQDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHT-CKAINH-- 113
+++ +D+ + N C+ + G CSQ+C T + +C C GY E N T C IN
Sbjct: 1272 QVIRSDANRPTNTNACKTKNGQCSQLCLPTGQNQRVCVCTAGY--ERKNETYCAGINSLL 1329
Query: 114 ------------------SAAFLIISNRHSILVADLEEKGKDHRAQD------------I 143
+ A IS V D H AQD I
Sbjct: 1330 IYSADSEIRGITYNPNNSTQALPFISQIQKATVIDF------HAAQDYIYWVETTPNYRI 1383
Query: 144 VVSGLDL-------------VEGLAYDWIGGHIYWLDSRLNRIEVCD-------ENGTNR 183
V DL + +A DWI GH+YW D++ IE+ +
Sbjct: 1384 VRIKRDLTGHEVILSDEQGRITDIAVDWIAGHLYWTDAQRKVIELIQLEKKESEKERKRY 1443
Query: 184 IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+V+ +D + P+ ++L P GT + W D G + IE+ +DG++R ++ +GL
Sbjct: 1444 VVIHRD-LLNPQNIVLSPKEGT--MIWVDSG-SMTIEQASLDGADRKVLLKLTTSNVSGL 1499
Query: 244 TLDIATRRVYF---ADSK------LDFIDCKSLEIKTNVNYSTIFR-KLYWIDEGGNGVP 293
+LD R++ + +S+ ++ D K++ + T+F+ K+YWID +
Sbjct: 1500 SLDHTNRKMLYWCERESRSIRRLNIETKDLKTVSTAADCYSLTVFKTKMYWIDVPLSSSE 1559
Query: 294 LKIGKANMDGSNASI--------LVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
I + +G ++ L+S ++++ + L +S + + L T
Sbjct: 1560 ASILSMSKEGGTPTVIQSKLPKNLISIKVFDREVQTDHDSYLLFSKVTAIQSLHMTG-NR 1618
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
N E I R+ I + D +RV+F+D + I +G+ +
Sbjct: 1619 NKPAEEIQSKTQIRNVI---------AIAADYKQQRVFFSDIQQSNIQSVWINGSSFSNI 1669
Query: 406 ILIDLMVEFTNDLMGDNGVPALALDLENGMLYYST 440
+ + V LA D N LY+++
Sbjct: 1670 TTV---------VPSIGSVEGLAFDSVNSTLYWTS 1695
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 10/128 (7%)
Query: 144 VVSGLDLVEGLAYDWIGGHIYWL---DSRLNRIEV----CDENGTNRIVLAKDNITQPRG 196
VV + VEGLA+D + +YW +S +NRI+V + G + ++ PR
Sbjct: 1672 VVPSIGSVEGLAFDSVNSTLYWTSYSNSSINRIKVNANTGEAAGKPQKLVQLSTSDHPRA 1731
Query: 197 MMLDPSPGTRWLFWTDW-GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+++D T+ +FW++W P I+R G + I+ T I PNGL +D + +Y+
Sbjct: 1732 IVVDSC--TQRMFWSNWHSSQPGIQRAYFSGFSAQFIVKTDISTPNGLAIDHKEQFLYWI 1789
Query: 256 DSKLDFID 263
D++LD I+
Sbjct: 1790 DARLDRIE 1797
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 138/355 (38%), Gaps = 84/355 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEG---------PGCDLAECKHKFGLCSNTCHPTPLGALCTC 55
C+ L+K CD K DC G DE P CD C+ + C T G C C
Sbjct: 30 CIPLSKFCDKKKDCYLGGDEASCNVTFRTLPSCDTLNCE-------DNCTKTIKGPKCYC 82
Query: 56 PPGE--ILSNDSVTCQDMNECE-QPGYCSQMCT--NTKGSYICSCNEGYVLEYDNHTC-- 108
+ ++S + TC N C+ G C Q C+ NT CSC GY D + C
Sbjct: 83 DSDKFTMVSEQNNTCIKYNPCDYHEGICDQKCSFNNTTNKVTCSCVSGY--GSDGNQCFP 140
Query: 109 --KAINHSAAFLIISNR------------------HSILVAD-LEEKGKDHRAQ------ 141
A+ F + +++ HS A+ + DHR Q
Sbjct: 141 LDGALTGKTYFWVAASKVLLQFRLDDVLNSTLRLAHSSPEANYIRTVDFDHRKQLVCWIM 200
Query: 142 ---------------DIVVSGLDLVEGLAYDWIGGHIY--------WLDSRLNRIEVCDE 178
+++ ++ + IG Y +LD NRI +C+
Sbjct: 201 YRPSPIDKSTMKCMNQTTQKIMEIPTEVSLETIGSMAYDWINENWYFLDVSNNRIILCNS 260
Query: 179 NGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST--K 236
G + + P+ ++L+P+ G + I + +DGSN ST++ +
Sbjct: 261 EGQKCVRIVDFGNLVPQTLVLEPNLGLMFYTVKSKTMGWSICQAHLDGSNSSTLVDKIEE 320
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN---VNYSTIFRKLYWIDEG 288
++ P+G+T+D A +++Y+ D D I+ I N VN +TI R I+ G
Sbjct: 321 LFSPHGITIDFANQQLYWVDHIKDTIE----RININGGAVNRNTITRLKTSINRG 371
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 110/269 (40%), Gaps = 31/269 (11%)
Query: 163 IYWLDSRLNRIE-----VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP 217
+YW+D L+ E + E GT ++ +K + D T + + +
Sbjct: 1548 MYWIDVPLSSSEASILSMSKEGGTPTVIQSKLPKNLISIKVFDREVQTDHDSYLLFSKVT 1607
Query: 218 RIERIGMDGSNRSTI--ISTKIYWPN--GLTLDIATRRVYFADSKLD-----FIDCKSLE 268
I+ + M G+ I +K N + D +RV+F+D + +I+ S
Sbjct: 1608 AIQSLHMTGNRNKPAEEIQSKTQIRNVIAIAADYKQQRVFFSDIQQSNIQSVWINGSSFS 1667
Query: 269 IKTNV----------NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
T V + ++ LYW + + AN + +G+ + +
Sbjct: 1668 NITTVVPSIGSVEGLAFDSVNSTLYWTSYSNSSINRIKVNANTGEA------AGKPQKLV 1721
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDW-GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
L + CT+ +FW++W P I+R G + I+ T I PNGL +D
Sbjct: 1722 QLSTSDHPRAIVVDSCTQRMFWSNWHSSQPGIQRAYFSGFSAQFIVKTDISTPNGLAIDH 1781
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ +Y+ D++LD I+ C++DG R V+
Sbjct: 1782 KEQFLYWIDARLDRIERCDFDGNHRAVVM 1810
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ IV + + GLA D +YW+D+RL+RIE CD +G +R V+ P G+ L
Sbjct: 1763 AQFIVKTDISTPNGLAIDHKEQFLYWIDARLDRIERCDFDGNHRAVVMTSIPQHPFGLAL 1822
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
+L+WTDW + + D S+ + + P G+ +
Sbjct: 1823 ----YEDYLYWTDWLLHAVVRVNKYDSSDYTYLEQNLNRQPMGIAV 1864
>gi|432845794|ref|XP_004065856.1| PREDICTED: low-density lipoprotein receptor-like [Oryzias latipes]
Length = 887
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 194/399 (48%), Gaps = 70/399 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+++ VCD DC +G+DE C + EC G CS+ C+ +G C+CP G L
Sbjct: 285 ECISMENVCDKTKDCSDGSDEPESSCGINECSTANGGCSHHCNDLKIGFNCSCPAGYKLK 344
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D+NEC + CSQ+C N GSY C C GY ++ ++TCKA + + L+ +
Sbjct: 345 ADQRNCEDINECAEADTCSQICINLPGSYKCDCEWGYKIDPVSNTCKAESGTVPALLFTT 404
Query: 123 RHSI----------------------LVADLEEKG----------------KDHRAQDIV 144
RH + L D+ +K D ++ +
Sbjct: 405 RHDVRKILVDHSEYVQVIPGLKNAAALDMDMAQKTLYWSDVSLKKIFRLNLADSSSKPVT 464
Query: 145 V--SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
V SG++ EG+A DW+ G+IYW DS L I V +GT R L ++N+ +PR + +DP
Sbjct: 465 VIDSGIETPEGIAVDWVHGNIYWTDSTLKTISVASTDGTKRKTLIRENLDKPRAITIDPV 524
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+++WTDWG + +IE+ G++G+ R +++ I PNG+TLD+ +R+Y+ DSKL +
Sbjct: 525 --NNFVYWTDWGHHAKIEKSGLNGAGRVALVTENIVSPNGITLDMVNQRLYWVDSKLHTV 582
Query: 263 DCKSLEIKTNVNYS--------------TIFR-KLYWIDEGGNGVPLKIGKANMDGSNAS 307
S+++ + T+F K++W D G G+ + + G N +
Sbjct: 583 --FSIDVNGGTRHRVVVINQRPSHPFSLTVFEDKVFWTDTGLRGI---YSASRLTGRNLT 637
Query: 308 ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ A LD ++ Y LK + W + G++
Sbjct: 638 QI-------AGDLDHPEDIILYHNLKQPIGINWCNSGKD 669
>gi|195381779|ref|XP_002049622.1| GJ21697 [Drosophila virilis]
gi|194144419|gb|EDW60815.1| GJ21697 [Drosophila virilis]
Length = 4618
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 128/375 (34%), Positives = 177/375 (47%), Gaps = 71/375 (18%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGE 59
+++C+ ++++CDG DC + DEG C +L E H+ CS+ CH TP G +C+CPP
Sbjct: 1132 SNKCITVSQLCDGNNDCEDTTDEGFLCADELCEQGHE---CSHNCHNTPEGYICSCPPHL 1188
Query: 60 ILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI 119
L + C + CE CSQ+C N Y C C EGY L YD TCK+ ++I
Sbjct: 1189 YLQPNGKRCSMQHACEHWDTCSQVCENNGKGYACQCLEGYDLAYDKFTCKSTAPDEPYVI 1248
Query: 120 ISNRHSILVADLEEKG----------------------------------KDHRAQ---- 141
+NR I +L+ G K +R Q
Sbjct: 1249 FTNRQDIRGINLKTLGASSFYSSLRNIIALDFLYSNESSVDIFWTDVIDDKIYRGQLVGE 1308
Query: 142 ------DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
+V SGL EGLA DWIG ++YW+DS L++IEV NG+ R L N+ PR
Sbjct: 1309 SLRNVEAVVHSGLSTTEGLAVDWIGKNLYWIDSNLDQIEVAKLNGSFRRTLIAGNMESPR 1368
Query: 196 GMMLDPSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIST---KIYWPNGLTLDIATRR 251
+ LDP G LFWTDW +N PRIER M G R I ++ WPNGLTLD +R
Sbjct: 1369 AIALDPREGL--LFWTDWDDNSPRIERCSMAGEGRRIISTSWQLSAGWPNGLTLDYTQKR 1426
Query: 252 VYFADSKLDFIDC------------KSLEIKTNVNYSTIFRK-LYWIDEGGNGVPLKIGK 298
VY+ D+K D I ++ EI ++ ++F +YW D V I
Sbjct: 1427 VYWVDAKSDSISSTKYDGSEHHVVLRNKEILSHPFAISVFENYVYWTDWRTTSV---IRA 1483
Query: 299 ANMDGSNASILVSGQ 313
+GS+ +L Q
Sbjct: 1484 NKWNGSDVQVLQRTQ 1498
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 171/364 (46%), Gaps = 65/364 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EILSN 63
C++ +CD + DC + +DE C++ EC +C + C +G C C PG ++L
Sbjct: 2906 CISADLLCDRRNDCADYSDE-ELCNVNECLIP-DICEHECVDKVVGFECRCRPGYKLLPK 2963
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
C D++EC++ CSQ C NT GSY C C +GY L D+ TCKA ++ LI SNR
Sbjct: 2964 SPHLCTDIDECDEQQPCSQTCINTYGSYKCLCAKGYELR-DHRTCKATSNVTMKLIFSNR 3022
Query: 124 H-----------SILVADLEEKGK----------------------------DHRAQDIV 144
+ SIL+ L +++ Q +
Sbjct: 3023 YYIRQVNHTGNGSILINALSNAVALDFDWDSQCLYWSDVTSTVGTIKRHCPVENKTQTLH 3082
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ L +GLA DW+ ++YW D L+ IEV +G R VL + + +PRG+ LDP
Sbjct: 3083 QAMLKNPDGLAVDWVAKNLYWCDKGLDTIEVSQLDGKYRRVLINEQLREPRGIALDPY-- 3140
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
R ++W+DWG+NP I + GMDGS II + WPN LT+ T+++++ D++ D I
Sbjct: 3141 QRHIYWSDWGDNPHIGKAGMDGSQPRMIIRENLGWPNALTISFETQQLFWGDAREDTISV 3200
Query: 265 KSLE-----------IKTNVNYSTIFR------KLYWIDEGGNGVPLKIGKANMDGSNAS 307
L+ I N+N IF ++YW D + DG N S
Sbjct: 3201 SDLDGNHTRLLLARSINPNLNLHHIFAIAVWEDRIYWSDWETKSIEY---CNKYDGQNCS 3257
Query: 308 ILVS 311
L++
Sbjct: 3258 TLIT 3261
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 133/308 (43%), Gaps = 59/308 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN- 63
C+ L++ CDG DC N + CD CS C TP GA C CP G++ +
Sbjct: 84 CLELSRFCDGHWDCDNDELQ---CDKQNVACAALNCSYNCKLTPQGARCYCPAGQVPESL 140
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN----------- 112
+S C D +EC PG C Q C NT GSY C+C GY C AIN
Sbjct: 141 NSTRCVDYDECSVPGTCDQQCRNTPGSYECACISGYTKH--GSRCLAINVPPSEPATLSL 198
Query: 113 ---------------------------------HSAAFLIISNRHSILVADLEEKGKDHR 139
H L + + LV + +
Sbjct: 199 LSVGTIRRISTAVDGGKLLSTQPVQFVLAYEVWHRNRTLCMLQKMPQLVMRCQRIDDANV 258
Query: 140 AQDIVVSGLD----LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
+ VS + + L DW+ G+ Y+L+ + +C N L + QP
Sbjct: 259 NWTLPVSAFNSQHQIFVELRLDWLSGNWYFLNENDGMVYLC-TNAVTFCRLILQQVAQPS 317
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
++LDP+ G +LF+TDW +P + R +DGSNR+T++ST+IY + +TLD+A+ VY+
Sbjct: 318 SLVLDPTKG--YLFYTDW--SPGLSRALLDGSNRTTLVSTQIYHLSSVTLDLASEHVYWI 373
Query: 256 DSKLDFID 263
D D I+
Sbjct: 374 DVYKDVIE 381
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 157/412 (38%), Gaps = 86/412 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ + CDGK DC +G+DE P + CKH GA C ++L +
Sbjct: 2863 CIFKNQTCDGKPDCGDGSDELP----SLCKHTRACNGADDFRCKNGA---CISADLLCDR 2915
Query: 65 SVTCQD--------MNECEQPGYCSQMCTNTKGSYICSCNEGY-VLEYDNHTCKAINH-- 113
C D +NEC P C C + + C C GY +L H C I+
Sbjct: 2916 RNDCADYSDEELCNVNECLIPDICEHECVDKVVGFECRCRPGYKLLPKSPHLCTDIDECD 2975
Query: 114 -----SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS 168
S + + L A E +DHR + I + Y+
Sbjct: 2976 EQQPCSQTCINTYGSYKCLCAKGYEL-RDHRT-------CKATSNVTMKLIFSNRYY--- 3024
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP-RIERIGMDGS 227
I + G I++ + LD ++ L+W+D I+R +
Sbjct: 3025 ----IRQVNHTGNGSILIN----ALSNAVALDFDWDSQCLYWSDVTSTVGTIKRHCPVEN 3076
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDE 287
T+ + P+GL +D + + LYW D+
Sbjct: 3077 KTQTLHQAMLKNPDGLAVDW------------------------------VAKNLYWCDK 3106
Query: 288 GGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
G + + + + +DG +L++ QL E + L+ R ++W+DWG+NP
Sbjct: 3107 GLDTIEV----SQLDGKYRRVLINEQLREPRGIALDPYQ---------RHIYWSDWGDNP 3153
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
I + GMDGS II + WPN LT+ T+++++ D++ D I + DG
Sbjct: 3154 HIGKAGMDGSQPRMIIRENLGWPNALTISFETQQLFWGDAREDTISVSDLDG 3205
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 61/245 (24%)
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL--- 166
+ N+ A + S+ + + G R ++ VEGLAYD + ++W
Sbjct: 2228 SYNYEAQLVYYSDVQLSTINQVHFNGSGQR---VLAMQQGRVEGLAYDAVNAQLFWTSNN 2284
Query: 167 DSRLNRIEV------CDENGTN-RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE-NPR 218
D+ + +E+ ++N + R VL+ + +PRG+ ++P G ++WT+W E +P
Sbjct: 2285 DAAIRSLELQHLSQQAEQNLQHVRNVLSLHSKDKPRGISVEPCLGM--IYWTNWNEQSPS 2342
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
I+R + G II T I PN LTLD+ +++Y+AD++LD
Sbjct: 2343 IQRAYLTGYGVERIIRTDIKMPNALTLDLEQQQLYWADARLD------------------ 2384
Query: 279 FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWL 338
KI +AN DG+N +L A A M Y L L
Sbjct: 2385 ----------------KIERANYDGTNRVVLAHTTPKHAFA------MAVYGDL-----L 2417
Query: 339 FWTDW 343
FWTDW
Sbjct: 2418 FWTDW 2422
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 120/327 (36%), Gaps = 83/327 (25%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG--CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + +CDG DC N DE L +C+H C N C
Sbjct: 3697 CIRKSALCDGVNDCGNNEDESDQVCAALPKCRHDQFQCEND----------DCISKNFRC 3746
Query: 63 NDSVTCQDMNE---CEQP----GYCSQMCTNTK-GSYICSCNEGYVLEY-DNHTCKAINH 113
+ C D ++ C+ P G CSQ+C K G Y C C GY N TC A
Sbjct: 3747 DGQYNCIDGSDEMNCQPPVCGFGTCSQICIEKKAGHYNCKCTTGYHKGVAKNATCLASGP 3806
Query: 114 SAAFLIISNR-------------------------------------------------- 123
L+ S +
Sbjct: 3807 DQILLLASEQEFRFILPAKQEGTTVVGFFQTDSLKIDVFDILIRPKDTLLFWIDSHHGKV 3866
Query: 124 HSILVADLEEKGKDHRAQDIV-------VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
H++ +A +G R + + + LD + LA DWI +Y +DSR N+I
Sbjct: 3867 HTMKIATPHVEGTGVRVRRDLKELTAFNIPDLDDPKSLAVDWITQMVYIVDSRHNQIIAT 3926
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 236
D G I L + P ++L+P +R + W+ I +DG+N+ +++
Sbjct: 3927 DIEGKKYISLVSTGMN-PTDIVLEPE--SRVMIWSTLENG--ILVASLDGNNKKSLVERD 3981
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFID 263
+ WP L++D T R+Y+AD + I+
Sbjct: 3982 VGWPISLSIDYPTGRLYWADYRKGTIE 4008
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPN 371
+ L+L ++ S C ++WT+W E +P I+R + G II T I PN
Sbjct: 2306 HVRNVLSLHSKDKPRGISVEPCLGMIYWTNWNEQSPSIQRAYLTGYGVERIIRTDIKMPN 2365
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
LTLD+ +++Y+AD++LD I+ NYDGT R + F + GD
Sbjct: 2366 ALTLDLEQQQLYWADARLDKIERANYDGTNRVVLAHTTPKHAFAMAVYGD 2415
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
+LF+TDW +P + R +DGSNR+T++ST+IY + +TLD+A+ VY+ D D I+ N
Sbjct: 327 YLFYTDW--SPGLSRALLDGSNRTTLVSTQIYHLSSVTLDLASEHVYWIDVYKDVIERVN 384
Query: 397 YDGTGR 402
YDG R
Sbjct: 385 YDGQQR 390
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 154/354 (43%), Gaps = 74/354 (20%)
Query: 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
D + G+A DWI G+IYW D++ N IEV +G+NR V+ N+ +P + +DP G L
Sbjct: 1957 DWLGGIAIDWIAGNIYWSDTKRNIIEVSRLDGSNRYVVVA-NVDKPTALAVDPVQGL--L 2013
Query: 209 FWTDWGENPRIERIGMDGSNRSTIIS-TKIYWP-NGLTLDIATRRVYFADS------KLD 260
F+ I R G+DGS +++ T+ W + + +D+ +VY+ + K+D
Sbjct: 2014 FYV---TQLHIGRTGLDGSQPFVLVNQTRTNWSVSSIIVDMDATKVYWCERYPDALMKVD 2070
Query: 261 F---IDCKSLEIKTN--VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ + + L TN V + + LYW + N +K+ + IL + Q
Sbjct: 2071 YDGNLREELLNDTTNKPVALAKLGDYLYWAENTYNEGAIKVAPLTNLSQSRQILKTEQ-- 2128
Query: 316 EALA-LDLENGMLYYSTLKCTR--------WLF-WTDWGENPRIERIGMDGSN------- 358
+A+ L + + + + T C + LF T+ R+ DG++
Sbjct: 2129 DAIRDLKIYSKRVQHGTNPCAQNNGGCEQLCLFNGTNAVCACAHSRLAADGTSCEPYENF 2188
Query: 359 -----RSTIISTKIY------WP-----NG--------LTLDIATRRVYFADSKLDFIDF 394
RS I S + WP NG ++ + + VY++D +L I+
Sbjct: 2189 LLFSYRSNIESIHMTEHANKNWPVQLISNGTLMRNVVAISYNYEAQLVYYSDVQLSTINQ 2248
Query: 395 CNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKT 448
+++G+G++ + + VE LA D N L++++ +++
Sbjct: 2249 VHFNGSGQRVLAMQQGRVE------------GLAYDAVNAQLFWTSNNDAAIRS 2290
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 12/125 (9%)
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+G V +AYDW+ H+YW + ++ V ++ VL + P + LD PGT
Sbjct: 600 TGWRKVRAIAYDWVNEHLYW--TEYQKLHVAPLRNMSK-VLTFNIDCNPMSLELD--PGT 654
Query: 206 RWLFWTDWGE---NPRIERIGMDGSNRSTIISTK----IYWPNGLTLDIATRRVYFADSK 258
L+WT W I MDG+++ + + +++P L +D T+R+Y+ DSK
Sbjct: 655 GLLYWTQWSFRSCEAGIYSAWMDGTHKELLTKSSEELPMHFPRSLDVDRRTKRIYWCDSK 714
Query: 259 LDFID 263
L I+
Sbjct: 715 LGTIE 719
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTK----IYWPNG 372
+L LD G+LY W W+ I MDG+++ + + +++P
Sbjct: 647 SLELDPGTGLLY--------WTQWSFRSCEAGIYSAWMDGTHKELLTKSSEELPMHFPRS 698
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFT 415
L +D T+R+Y+ DSKL I+ DGTGR+ + + F+
Sbjct: 699 LDVDRRTKRIYWCDSKLGTIERIKLDGTGRELLFKSEQFHPFS 741
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 96/235 (40%), Gaps = 63/235 (26%)
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
++W+D +N I + G+ II+T I P G +D + +YF+ +
Sbjct: 1608 IYWSDIQQN-EISKAGISNGLIEPIINTNIEKPYGFAIDWIAKHMYFSSGQ--------- 1657
Query: 268 EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS-NASILVSGQLYEALALDLENGM 326
N TI +N+ G I + + +++ALD NG
Sbjct: 1658 ------NVGTIL------------------ASNLKGEYTTHIHENLNMVDSIALDPANGK 1693
Query: 327 LY--YSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384
+Y +ST T W ++E+ +DGS R +I LT+D ++R+Y+
Sbjct: 1694 MYWIHSTHDSTLW----------QLEQSNLDGSER-MVIHDHNNSMQSLTMDFDSQRLYY 1742
Query: 385 ADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPAL-ALDLENGMLYY 438
A YD +G + D+ T+ ++ + + ++ +L + NG LY+
Sbjct: 1743 A-----------YDNSG---IAYYDIPKNETHIVLSASPITSISSLTVYNGTLYF 1783
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPNGLTLDIATRRVYFADS 387
T L+W D E I R+ DG++R TI+ + W G+ +D +Y++D+
Sbjct: 1918 TDMLYWGD-NELGSISRVRRDGTHRETILEAINLAGYKQQDWLGGIAIDWIAGNIYWSDT 1976
Query: 388 KLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTE 441
K + I+ DG+ R V+ + ALA+D G+L+Y T+
Sbjct: 1977 KRNIIEVSRLDGSNRYVVV------------ANVDKPTALAVDPVQGLLFYVTQ 2018
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 16/170 (9%)
Query: 100 VLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLD--LVE----- 152
+L+ ++HT I S L+ R LV D D + +I +G+ L+E
Sbjct: 1576 LLQPNHHTIPTIRQSPR-LVAPQRIDFLVEDSHIYWSDIQQNEISKAGISNGLIEPIINT 1634
Query: 153 ------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTR 206
G A DWI H+Y+ + + +N+ + LDP+ G
Sbjct: 1635 NIEKPYGFAIDWIAKHMYFSSGQNVGTILASNLKGEYTTHIHENLNMVDSIALDPANGKM 1694
Query: 207 -WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
W+ T ++E+ +DGS R +I LT+D ++R+Y+A
Sbjct: 1695 YWIHSTHDSTLWQLEQSNLDGSER-MVIHDHNNSMQSLTMDFDSQRLYYA 1743
>gi|260827336|ref|XP_002608621.1| hypothetical protein BRAFLDRAFT_183747 [Branchiostoma floridae]
gi|229293972|gb|EEN64631.1| hypothetical protein BRAFLDRAFT_183747 [Branchiostoma floridae]
Length = 1391
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/337 (34%), Positives = 167/337 (49%), Gaps = 56/337 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGP------GCDLAECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G +C + +DE P L C+ G C + C C+C
Sbjct: 140 RCIGSHKLCNGVDNCGDNSDEAPELQCSKDTSLCSCQDGNGGCEHKCSMMGSRIWCSCHE 199
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L D TC D++EC+ G CSQMC NT GS+ CSC +GY L+ D CKA+ A
Sbjct: 200 GYRLMPDGRTCADVDECQLEGTCSQMCHNTIGSFQCSCVKGYELKPDKKGCKALGPEAWL 259
Query: 118 L-------------------IISNRHSILVADLEEK-----------GKDHRA------- 140
L I+SN + + D + + RA
Sbjct: 260 LFANRIDIRRMHPDRSDYDPILSNLQNAIALDFHSEQNWVYWSDVTLDRIMRAYLNGSGM 319
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++V +GL+ G+A DW+G +YW DS RIEV +G+ R V+ +N+ +PR + +
Sbjct: 320 AEVVSTGLESPGGVAVDWVGNKLYWTDSGTARIEVSHLDGSYRKVVLWENVEKPRAIAVH 379
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G LFWTDWG P+IE GMDG+ R + T ++WPNGLTLD AT ++Y+AD+K
Sbjct: 380 PLEGK--LFWTDWGSTPKIESAGMDGTVRGAVAKTNLFWPNGLTLDYATNKLYWADAKHH 437
Query: 261 FIDCKSL---EIKTNVNYS-------TIFR-KLYWID 286
I+C +L E K ++ T+F LYW D
Sbjct: 438 VIECANLDGTERKAVISQGLPHPFAITLFEDNLYWTD 474
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 191/459 (41%), Gaps = 106/459 (23%)
Query: 38 GLCSNTCHPTPL----GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYIC 93
G CS+ C PL G C CP G L D TCQ + Y M N C
Sbjct: 827 GGCSHLCLIAPLSSGRGYSCACPTGVTLLGDGRTCQPIF------YQWLMVAN------C 874
Query: 94 SCNEGYVLEYDNHT-CKAIN-----HSAAFLIISNRHSILVADLEEKG-----------K 136
S L + T +AI+ ++ L IS + + D++EK +
Sbjct: 875 SAGMHNFLVFARRTDVRAISLDVPYYADVMLPISGLKNAIAIDVDEKNGKVYWTDSVTDR 934
Query: 137 DHRA-------QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
RA +++V SGLD +GLA D +G +YW D+ +RIEV D +G NR+VL +
Sbjct: 935 IQRANFDGTEVENVVESGLDTTDGLAVDSVGRKVYWTDTGKDRIEVADLDGKNRLVLVWE 994
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
+ PR + L G +++WTDWG PR+ER MDG++R ++ST + WPNGLT+D
Sbjct: 995 GLDSPRAIALHYDAG--YMYWTDWGSTPRVERANMDGTDRQVLVSTNLGWPNGLTIDKIA 1052
Query: 250 RRVYFADSKLDFIDCKSLEIKTN----------VNYSTIFRKLYWIDEGGNGVPLKIGKA 299
R+ +AD++ + I+ L K + + +YW D I +A
Sbjct: 1053 GRLIWADARTEIIESSDLNGKNRNVLVTSAPHPYGLTLMGAYIYWTDWQTR----SIQRA 1108
Query: 300 NMDGSNASILVSGQ---LYEALALDLENGMLY-YSTLKC--------------------- 334
D I + G L + A+ +N +L+ T +C
Sbjct: 1109 RKDTGEDQITIRGNLPGLMDIHAVQADNLVLFDVGTNRCGPNNGGCSHLCLPKPNGITCA 1168
Query: 335 -------------------TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
T LF I RI +D + + +I N + L
Sbjct: 1169 CPTGITLKEDGRTCHDAPETMLLF----AARGSIRRISLDTGDHTDVILPLPDIQNVIAL 1224
Query: 376 DIATR--RVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
D + ++Y+ D +LD I N +GTG + ++ DL+
Sbjct: 1225 DFDSHEGKLYYTDVQLDKIRRANLNGTGMEDIVFRDLVT 1263
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 119/252 (47%), Gaps = 21/252 (8%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
C G CS+ C P P G C CP G L D TC D E G ++ +T
Sbjct: 1146 RCGPNNGGCSHLCLPKPNGITCACPTGITLKEDGRTCHDAPETMLLFAARGSIRRISLDT 1205
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ L++D+H K + I A+L G +D
Sbjct: 1206 GDHTDVILPLPDIQNVIALDFDSHEGKL------YYTDVQLDKIRRANLNGTG----MED 1255
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
IV L +G+A DWI ++YW D+ N I+V +G++R L +++ +PR + L P
Sbjct: 1256 IVFRDLVTADGIAVDWIAKNLYWTDTGKNTIDVARLDGSSRKTLLNNSLDEPRAITLFPR 1315
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG PRIER +DG+ R I+ T + WPNG+T+D RRVY+ D+ LD I
Sbjct: 1316 KG--YLFWTDWGAYPRIERAQLDGTERRIIVDTDLGWPNGITIDPINRRVYWVDAHLDRI 1373
Query: 263 DCKSLEIKTNVN 274
+ + V
Sbjct: 1374 ETSDFNGRNRVQ 1385
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 132/318 (41%), Gaps = 61/318 (19%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
C G CS+ C P C CP G L N+ D+ EQ ++ + S+
Sbjct: 517 RCGENNGGCSHLCLQNPTSYSCHCPTGIRLLNEKDCATDI---EQFLLFARRTDIRRISF 573
Query: 92 ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADL------EEKGKDHRAQDIVV 145
VL + + A S I +D+ K + +V
Sbjct: 574 DTREKADVVLPLGE-----LRSAVALDWDSEEGHIYWSDVTADTINRAKWDGSEIEVLVN 628
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
S L+ GLA DW+ +YW D+ +RIEV + +G+ R VL + + +PR +++DP G
Sbjct: 629 SSLESPAGLAVDWVTRKLYWTDAGSDRIEVSNLDGSTRSVLIWEMLDRPRDIIVDPIEGH 688
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
++WTDWG +P+IER GMDGS R I++ + WPNGL +D R+++ D+ L I+
Sbjct: 689 --MYWTDWGLSPKIERAGMDGSERQPIVTKNLTWPNGLAIDSELGRLFWVDAGLKTIEFS 746
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
SL DG+N +L+ QL L L
Sbjct: 747 SL----------------------------------DGTNRQVLIGTQLPHPFGLTLHED 772
Query: 326 MLYYSTLKCTRWLFWTDW 343
+Y WTDW
Sbjct: 773 KVY-----------WTDW 779
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 99/203 (48%), Gaps = 28/203 (13%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATR--RVYFADSKLDFID------------- 263
I RI +D + + +I N + LD + ++Y+ D +LD I
Sbjct: 1198 IRRISLDTGDHTDVILPLPDIQNVIALDFDSHEGKLYYTDVQLDKIRRANLNGTGMEDIV 1257
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
+ L + I + LYW D G N + + A +DGS+ L++ L E A+ L
Sbjct: 1258 FRDLVTADGIAVDWIAKNLYWTDTGKNTIDV----ARLDGSSRKTLLNNSLDEPRAITLF 1313
Query: 324 NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 383
Y LFWTDWG PRIER +DG+ R I+ T + WPNG+T+D RRVY
Sbjct: 1314 PRKGY---------LFWTDWGAYPRIERAQLDGTERRIIVDTDLGWPNGITIDPINRRVY 1364
Query: 384 FADSKLDFIDFCNYDGTGRQQVI 406
+ D+ LD I+ +++G R Q++
Sbjct: 1365 WVDAHLDRIETSDFNGRNRVQLV 1387
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 94/180 (52%), Gaps = 19/180 (10%)
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI 296
IYW + +T D R + S+++ + SLE + + RKLYW D G + +I
Sbjct: 603 IYWSD-VTAD-TINRAKWDGSEIEVLVNSSLESPAGLAVDWVTRKLYWTDAGSD----RI 656
Query: 297 GKANMDGSNASILVSGQLYEA--LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+N+DGS S+L+ L + +D G +Y WTDWG +P+IER GM
Sbjct: 657 EVSNLDGSTRSVLIWEMLDRPRDIIVDPIEGHMY-----------WTDWGLSPKIERAGM 705
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
DGS R I++ + WPNGL +D R+++ D+ L I+F + DGT RQ +I L F
Sbjct: 706 DGSERQPIVTKNLTWPNGLAIDSELGRLFWVDAGLKTIEFSSLDGTNRQVLIGTQLPHPF 765
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 135/353 (38%), Gaps = 87/353 (24%)
Query: 75 EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK 134
E G CS +C SY C C G L + I FL+ + R I + +
Sbjct: 520 ENNGGCSHLCLQNPTSYSCHCPTGIRLLNEKDCATDIEQ---FLLFARRTDIRRISFDTR 576
Query: 135 GKDHRAQDIVVSGLDLVEGLAYDWIG--GHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
K D+V+ +L +A DW GHIYW D + I
Sbjct: 577 EK----ADVVLPLGELRSAVALDWDSEEGHIYWSDVTADTIN------------------ 614
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
R DGS ++++ + P GL +D TR++
Sbjct: 615 ----------------------------RAKWDGSEIEVLVNSSLESPAGLAVDWVTRKL 646
Query: 253 YFADSKLDFIDCKSLEIKT-------------NVNYSTIFRKLYWIDEGGNGVPLKIGKA 299
Y+ D+ D I+ +L+ T ++ I +YW D G+ KI +A
Sbjct: 647 YWTDAGSDRIEVSNLDGSTRSVLIWEMLDRPRDIIVDPIEGHMYWTDW---GLSPKIERA 703
Query: 300 NMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGS 357
MDGS +V+ L LA+D E G LFW D G IE +DG+
Sbjct: 704 GMDGSERQPIVTKNLTWPNGLAIDSELGR-----------LFWVDAGLKT-IEFSSLDGT 751
Query: 358 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
NR +I T++ P GLTL +VY+ D + I + R+QV+ +L
Sbjct: 752 NRQVLIGTQLPHPFGLTL--HEDKVYWTDWQSKSIQSADKTTGLRRQVLRENL 802
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK 188
IV + L G+ D I +YW+D+ L+RIE D NG NR+ L +
Sbjct: 1343 IVDTDLGWPNGITIDPINRRVYWVDAHLDRIETSDFNGRNRVQLVE 1388
>gi|395840696|ref|XP_003793189.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 8, partial [Otolemur garnettii]
Length = 942
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 155/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 290 CVLAIKRCNQEQDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKMGFECTCPTGFRLL 348
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG + C C+ GY ++ CKA+ + LI +N
Sbjct: 349 -DEKTCGDIDECEDPDACSQICVNYKGYFKCECHPGYEMDILTKNCKAVAGRSPSLIFTN 407
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D Q
Sbjct: 408 RHEVRKIDLVKRDYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPAEQ 467
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++++ L EGLA DW+ HIYW DS I V +G R L N+++PR + +D
Sbjct: 468 EVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRCTLFSHNLSEPRAIAVD 527
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG +IE+ G++G++R T++S I WPNG+TLD+ T+R+Y+ DSKL
Sbjct: 528 PLRG--FMYWSDWGYQAKIEKSGLNGADRQTLVSDNIEWPNGITLDLLTQRLYWVDSKL 584
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 174/417 (41%), Gaps = 79/417 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTC--HPTPLGALCTCPPGEI 60
CV+L CDG DC + +DE C L C +F TC CP G
Sbjct: 250 ECVHLGWRCDGDRDCKDKSDEA-DCPLGTCHGDEFQCGDGTCVLAIKRCNQEQDCPDG-- 306
Query: 61 LSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SA 115
S+++ Q +NEC G CS +CT+ K + C+C G+ L D TC I+ A
Sbjct: 307 -SDEAGCLQGLNECLHNNGGCSHICTDLKMGFECTCPTGFRL-LDEKTCGDIDECEDPDA 364
Query: 116 AFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEV 175
I N + + DI+ V G + I + + + +I++
Sbjct: 365 CSQICVNYKGYFKCECHPGYE----MDILTKNCKAVAGRSPSLIFTNRH----EVRKIDL 416
Query: 176 CDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RST 231
+ + I + K+ + LD T ++W D +I MD ++ +
Sbjct: 417 VKRDYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPAEQEV 469
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+I +++ P GL +D + + +YW D G
Sbjct: 470 LIDEQLHSPEGLAVDW------------------------------VHKHIYWTDSGNK- 498
Query: 292 VPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
I A +DG L S L E A+A+D G +Y W+DWG +I
Sbjct: 499 ---TISVATVDGGRRCTLFSHNLSEPRAIAVDPLRGFMY-----------WSDWGYQAKI 544
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
E+ G++G++R T++S I WPNG+TLD+ T+R+Y+ DSKL + ++ G R+ +I
Sbjct: 545 EKSGLNGADRQTLVSDNIEWPNGITLDLLTQRLYWVDSKLHQLSSIDFSGGNRKVLI 601
>gi|344278684|ref|XP_003411123.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
isoform 2 [Loxodonta africana]
Length = 788
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/303 (35%), Positives = 156/303 (51%), Gaps = 48/303 (15%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCD--LAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+ +CV + CDG+ DC +GADE GC L EC H G CS+ C +G CTCP G
Sbjct: 132 TSHKCVPASWRCDGEKDCESGADEA-GCASWLNECLHNNGGCSHICTDLKIGFECTCPAG 190
Query: 59 EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL 118
L D TC D++ECE P CSQ+C N KG + C C+ GY ++ CKA+ + L
Sbjct: 191 FRLL-DQKTCGDIDECEDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAVAGKSPSL 249
Query: 119 IISNRHSILVADL-----------------------------------------EEKGKD 137
I +NRH + DL +K D
Sbjct: 250 IFTNRHEVRRIDLVKRDYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASD 309
Query: 138 HRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
Q++++ L EGLA DW+ HIYW DS I V +G+ R L ++++PR
Sbjct: 310 PAEQEVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGSRRRTLFSQDLSEPRA 369
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ +DP G +++W+DWG +IE+ G++G +R T++S I WPNG+TLD+ +R+Y+ D
Sbjct: 370 ISVDPLRG--FMYWSDWGYQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLNQRLYWVD 427
Query: 257 SKL 259
SKL
Sbjct: 428 SKL 430
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 170/417 (40%), Gaps = 75/417 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHP-TPLGALCTCPPGEIL 61
C+ CDG+ +CP+G+DE C+ C + C T H P C
Sbjct: 92 HCIPERWKCDGEEECPDGSDETEATCNKQVCPAEKLSCGPTSHKCVPASWRCDGEKDCES 151
Query: 62 SNDSVTCQD-MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SA 115
D C +NEC G CS +CT+ K + C+C G+ L D TC I+ A
Sbjct: 152 GADEAGCASWLNECLHNNGGCSHICTDLKIGFECTCPAGFRL-LDQKTCGDIDECEDPDA 210
Query: 116 AFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEV 175
I N + + D + V G + I + + + RI++
Sbjct: 211 CSQICVNYKGYFKCECHPGYE----MDTLTKNCKAVAGKSPSLIFTNRH----EVRRIDL 262
Query: 176 CDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RST 231
+ + I + K+ + LD T ++W D +I MD ++ +
Sbjct: 263 VKRDYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPAEQEV 315
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+I +++ P GL +D + + +YW D G
Sbjct: 316 LIDEQLHSPEGLAVDW------------------------------VHKHIYWTDSGNK- 344
Query: 292 VPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
I A +DGS L S L E A+++D G +Y W+DWG +I
Sbjct: 345 ---TISVATVDGSRRRTLFSQDLSEPRAISVDPLRGFMY-----------WSDWGYQAKI 390
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
E+ G++G +R T++S I WPNG+TLD+ +R+Y+ DSKL + +++G R+ +I
Sbjct: 391 EKSGLNGVDRQTLVSDNIEWPNGITLDLLNQRLYWVDSKLHQLSSIDFNGGNRKMLI 447
>gi|345485108|ref|XP_001602954.2| PREDICTED: vitellogenin receptor [Nasonia vitripennis]
Length = 1845
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/343 (35%), Positives = 175/343 (51%), Gaps = 60/343 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CD--LAECKHKF-GLCSNTCHPTPLGALCTCPPGE 59
RC++L+ CDGK DC +G+DE CD L CK+ C+ C TP G+ C C PG
Sbjct: 183 RCISLSHTCDGKDDCGDGSDENKANCDKALTNCKNSTTNSCNQNCAATPAGSKCWCHPGY 242
Query: 60 ILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI 119
+L + C+D++EC++ G CSQ C NT GS+ C C GY L+ D +CKA N A +I
Sbjct: 243 VL--NGTVCEDIDECKEYGRCSQGCRNTIGSFFCQCAYGYKLQDDGVSCKAEN-GEALMI 299
Query: 120 ISNRHSI------------LVADLEE---------------------------KGKDHRA 140
+ + SI + DL + HR
Sbjct: 300 FAAKSSIRGYYLDSAIYFPIADDLSHVVGVSLDSTYVYWSDIRLGDEAIFRSLEDGTHR- 358
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ IV +GL E +A DWI G+IY+ DS ++ VC+ +G+ V+ K+ +PRG+ L
Sbjct: 359 EVIVTAGLGCPEDIAVDWITGNIYFTDSMYKQVGVCNHDGSFCTVIIKEATEKPRGIALL 418
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
PS G L+W+DWG+NP I MDGSNR+ + I WPNGLT+D + R+Y+ D++L
Sbjct: 419 PSHGK--LYWSDWGDNPHISVAYMDGSNRTFFVKDNIGWPNGLTIDYPSSRLYWVDARLK 476
Query: 261 FIDCKSLE----------IKTNVNYSTIFR-KLYWIDEGGNGV 292
I+ SL+ + T+ IF KLYW D N +
Sbjct: 477 VIESISLDGTDRRTVLRHVATHPYSIAIFENKLYWSDWSTNSI 519
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 138/306 (45%), Gaps = 52/306 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ L CDGK C +G+DEG C+ + C N CH TP+G +C+C G L++D
Sbjct: 1229 CLPLDMFCDGKEHCLDGSDEGGQCNTT---CETNTCENVCHKTPVGPVCSCRVGYELADD 1285
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
+C+D++EC+ C Q+C N GS++CSC EGY L + +CKA A LI +++
Sbjct: 1286 EKSCRDVDECKN-NVCQQLCENRPGSFVCSCYEGYALRINRVSCKATG-PAVKLIAASKD 1343
Query: 125 SILVAD----LEEKGKDHRAQDIVVSGLDL------------VEG--------------- 153
I + + HR ++ ++GLD+ +EG
Sbjct: 1344 DIRIMSPSTMISSLTIIHRDPEVEITGLDVDSKENTIYWSNEIEGIINKMNIDTKKRVTA 1403
Query: 154 ---------LAYDWIGGHIYWL-DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
LA DWI ++Y+ D R I+ C+ + V+ R + P
Sbjct: 1404 SNGVGRPETLAVDWITDNVYYFDDKRRPLIKACNVDANKCAVITHIEGMYQRVTTIAIEP 1463
Query: 204 GTRWLFWTD--WG--ENPRIERIGMD--GSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LFW W E P E + D G+N+ I+ + +GLT+D +Y++D
Sbjct: 1464 LKEMLFWGQVMWKIYEKPSSEIVRSDLMGANQKVIVRDNLGIISGLTIDYHRSILYWSDK 1523
Query: 258 KLDFID 263
L+ I+
Sbjct: 1524 YLNSIE 1529
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 183/462 (39%), Gaps = 125/462 (27%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL----AECKHKFGLCSNT---------------- 43
C+ + + CD + DC +G+DE C L A K K G C ++
Sbjct: 97 HCIPIEQYCDDEPDCMDGSDEFENCHLNKTCAGFKCKNGHCLHSKNWTCDGVNDCEDNSD 156
Query: 44 ---CHPTPLGAL-CTCPPGEILSND------SVTCQDMNEC-----EQPGYCSQMCTNTK 88
C +P+ C G L + S TC ++C E C + TN K
Sbjct: 157 EENCENSPIAPENCNNTIGRYLCGNKRCISLSHTCDGKDDCGDGSDENKANCDKALTNCK 216
Query: 89 GSYICSCNE---------------GYVLEYDNHTCKAINHSAAFLIISNR-HSILVADLE 132
S SCN+ GYVL + C+ I+ + S + + +
Sbjct: 217 NSTTNSCNQNCAATPAGSKCWCHPGYVL--NGTVCEDIDECKEYGRCSQGCRNTIGSFFC 274
Query: 133 EKGKDHRAQDIVVS-----GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
+ ++ QD VS G L+ A I G Y+LDS +
Sbjct: 275 QCAYGYKLQDDGVSCKAENGEALMIFAAKSSIRG--YYLDSAI-------------YFPI 319
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 246
D+++ G+ LD + +++W+D + I R DG++R I++ + P + +D
Sbjct: 320 ADDLSHVVGVSLDST----YVYWSDIRLGDEAIFRSLEDGTHREVIVTAGLGCPEDIAVD 375
Query: 247 IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
T +YF DS ++G N DGS
Sbjct: 376 WITGNIYFTDSMYK----------------------------------QVGVCNHDGSFC 401
Query: 307 SILV--SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
++++ + + +AL +G LY W+DWG+NP I MDGSNR+ +
Sbjct: 402 TVIIKEATEKPRGIALLPSHGKLY-----------WSDWGDNPHISVAYMDGSNRTFFVK 450
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I WPNGLT+D + R+Y+ D++L I+ + DGT R+ V+
Sbjct: 451 DNIGWPNGLTIDYPSSRLYWVDARLKVIESISLDGTDRRTVL 492
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
IV L ++ GL D+ +YW D LN IE D +G NR + D T+P G+
Sbjct: 1498 IVRDNLGIISGLTIDYHRSILYWSDKYLNSIEGVDFDGKNRKAIVADLTTKPIGLFF 1554
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 72/176 (40%), Gaps = 14/176 (7%)
Query: 112 NHSAAFLIISNRHSILVADLEEKG------KDHRAQDIVVSGLDLVEGLAYDWIGGHIYW 165
NH A S SI+ AD K + + I+ ++VE +A+D+ G ++Y
Sbjct: 629 NHITAMTYDSIADSIIAADDINKSIFRFNPRTNAINHIIPIVNEIVESMAFDYFGNNLYK 688
Query: 166 LDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD 225
++ +IEV + + P + L P G ++ + E I++ M+
Sbjct: 689 SNTIHKKIEVHSLTTGEKTEFSY--TENPYDIALVPEEGVMFVAFQTNNEF-HIDKAQMN 745
Query: 226 GSNRSTIISTKIYWPN-GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFR 280
G T + +Y P L D T+R+Y+ D I+ T + T+FR
Sbjct: 746 GLGSRTHLIEGLYGPKISLAYDRDTKRIYWCDEGTGRIE----SFDTQGQHRTLFR 797
>gi|348531738|ref|XP_003453365.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
[Oreochromis niloticus]
Length = 875
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 154/302 (50%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ +KVCD DC + +DE C L EC G CS+ C P+G C CP G L
Sbjct: 320 ECIDSSKVCDSVKDCKDRSDEPKKECGLNECMINNGGCSHVCMDRPIGFECQCPTGYRLL 379
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG + C C EGY ++ TCKA S +L+ +N
Sbjct: 380 -DKKTCGDIDECENPDACSQICINYKGDFKCECYEGYEMDPVTKTCKAEGKS-PYLLFTN 437
Query: 123 RHSILVADLEEKGKD------------------------------------HRAQD---- 142
RH I DL ++ H A D
Sbjct: 438 RHEIRRIDLVKRDYSQVVSTQKNAVALDLDVANNRVFWCDRFHRKIYSAFIHEASDPSQQ 497
Query: 143 --IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+V S L GLA DW+ ++YW DS I V +GT R VL ++++PR + LD
Sbjct: 498 VPLVESSLQTPVGLAVDWLQHNLYWTDSGDKSISVASVDGTKRRVLVSTDLSEPRAIALD 557
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++W+DWG +IE+ GM+G +R +++ I WPNG+TLD+A RR+Y+ DSKL
Sbjct: 558 PHHG--FMYWSDWGTRAKIEKAGMNGVDRQVLVADNIEWPNGITLDVANRRLYWVDSKLH 615
Query: 261 FI 262
I
Sbjct: 616 LI 617
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 108/217 (49%), Gaps = 40/217 (18%)
Query: 207 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD---------- 256
+L +T+ E I RI + + S ++ST+ L LD+A RV++ D
Sbjct: 432 YLLFTNRHE---IRRIDLVKRDYSQVVSTQKN-AVALDLDVANNRVFWCDRFHRKIYSAF 487
Query: 257 --------SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
++ ++ SL+ + + LYW D G + + A++DG+ +
Sbjct: 488 IHEASDPSQQVPLVE-SSLQTPVGLAVDWLQHNLYWTDSGDKSISV----ASVDGTKRRV 542
Query: 309 LVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 366
LVS L E A+ALD +G +Y W+DWG +IE+ GM+G +R +++
Sbjct: 543 LVSTDLSEPRAIALDPHHGFMY-----------WSDWGTRAKIEKAGMNGVDRQVLVADN 591
Query: 367 IYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403
I WPNG+TLD+A RR+Y+ DSKL I + +G R+
Sbjct: 592 IEWPNGITLDVANRRLYWVDSKLHLIASVDLNGAHRR 628
>gi|410924698|ref|XP_003975818.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
[Takifugu rubripes]
Length = 977
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/339 (34%), Positives = 168/339 (49%), Gaps = 60/339 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ +KVCD DC + +DE C L EC G CS+ C P+G C CPPG L
Sbjct: 336 ECIDSSKVCDSVKDCKDRSDEPKKECGLNECMINNGGCSHVCMDRPIGFECQCPPGYRLL 395
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG + C C EGY ++ TCKA S +L+ +N
Sbjct: 396 -DRKTCGDIDECENPDACSQICINYKGDFKCECYEGYEMDPVTKTCKAEGKS-PYLLFTN 453
Query: 123 RHSILVADLEEKGKD------------------------------------HRAQD---- 142
RH I DL ++ H A D
Sbjct: 454 RHEIRRIDLVKRDYSQVVSTQKNAVALDLDVANNRVFWCDRFHRKIYSAFIHEASDPSQQ 513
Query: 143 --IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++ S L GLA DW+ ++YW DS I V + T R VL ++++PR + LD
Sbjct: 514 VPLLESHLHTPVGLALDWLQHNLYWTDSGDKSISVASADATKRRVLISTDLSEPRSIALD 573
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++W+DWG +IE+ GM+G +R +++ I WPNG+TLD+A RR+Y+ DSKL
Sbjct: 574 PHHG--FMYWSDWGTRAKIEKAGMNGVDRQVLVADSIEWPNGITLDVANRRLYWVDSKLH 631
Query: 261 FI---DCKSLEIKTNVNYS---------TIFR-KLYWID 286
I D +T+++ + +F ++YW D
Sbjct: 632 LIASVDLNGAHRRTHMSSAETLGHPYALAVFEDRIYWTD 670
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 164/430 (38%), Gaps = 112/430 (26%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C++ TK C+ DC + +DE + C+ PL LC GE + +
Sbjct: 296 CIHGTKQCNKVHDCVDHSDESGCVNATRCE------------GPLKFLCK--NGECIDSS 341
Query: 65 SVT-----CQD----------MNECE-QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTC 108
V C+D +NEC G CS +C + + C C GY L D TC
Sbjct: 342 KVCDSVKDCKDRSDEPKKECGLNECMINNGGCSHVCMDRPIGFECQCPPGYRL-LDRKTC 400
Query: 109 KAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS 168
I+ S D + + + D V G Y L +
Sbjct: 401 GDIDECENPDACSQICINYKGDFKCECYEGYEMDPVTKTCKAE--------GKSPYLLFT 452
Query: 169 RLNRIEVCDENGTNRIVLAKDNI-----TQPRGMMLDPSPGTRWLFWTDWGENPRIERI- 222
NR E+ RI L K + TQ + LD +FW D R R
Sbjct: 453 --NRHEI------RRIDLVKRDYSQVVSTQKNAVALDLDVANNRVFWCD-----RFHRKI 499
Query: 223 -------GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNY 275
D S + ++ + ++ P GL LD
Sbjct: 500 YSAFIHEASDPSQQVPLLESHLHTPVGLALDW---------------------------- 531
Query: 276 STIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLK 333
+ LYW D G + + A+ D + +L+S L E ++ALD +G +Y
Sbjct: 532 --LQHNLYWTDSGDKSISV----ASADATKRRVLISTDLSEPRSIALDPHHGFMY----- 580
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
W+DWG +IE+ GM+G +R +++ I WPNG+TLD+A RR+Y+ DSKL I
Sbjct: 581 ------WSDWGTRAKIEKAGMNGVDRQVLVADSIEWPNGITLDVANRRLYWVDSKLHLIA 634
Query: 394 FCNYDGTGRQ 403
+ +G R+
Sbjct: 635 SVDLNGAHRR 644
>gi|119627147|gb|EAX06742.1| low density lipoprotein receptor-related protein 8, apolipoprotein
e receptor, isoform CRA_c [Homo sapiens]
Length = 793
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/303 (35%), Positives = 155/303 (51%), Gaps = 48/303 (15%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCD--LAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+ +CV + CDG+ DC GADE GC L EC H G CS+ C +G CTCP G
Sbjct: 137 TSHKCVPASWRCDGEKDCEGGADEA-GCATWLNECLHNNGGCSHICTDLKIGFECTCPAG 195
Query: 59 EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL 118
L D TC D++EC+ P CSQ+C N KG + C C GY ++ CKA + L
Sbjct: 196 FQLL-DQKTCGDIDECKDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAAGKSPSL 254
Query: 119 IISNRHSILVADL-----------------------------------------EEKGKD 137
I +NRH + DL +K D
Sbjct: 255 IFTNRHEVRRIDLVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASD 314
Query: 138 HRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ Q++++ L EGLA DW+ HIYW DS I V +G R L N+++PR
Sbjct: 315 PKEQEVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRRTLFSRNLSEPRA 374
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ +DP G +++W+DWG+ +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ D
Sbjct: 375 IAVDPLRG--FMYWSDWGDQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVD 432
Query: 257 SKL 259
SKL
Sbjct: 433 SKL 435
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 170/417 (40%), Gaps = 75/417 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHP-TPLGALCTCPPGEIL 61
C++ CDG+ +CP+G+DE C C + C T H P C
Sbjct: 97 HCIHERWKCDGEEECPDGSDESEATCTKQVCPAEKLSCGPTSHKCVPASWRCDGEKDCEG 156
Query: 62 SNDSVTCQD-MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SA 115
D C +NEC G CS +CT+ K + C+C G+ L D TC I+ A
Sbjct: 157 GADEAGCATWLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGDIDECKDPDA 215
Query: 116 AFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEV 175
I N + + D++ G + I + + + RI++
Sbjct: 216 CSQICVNYKGYFKCECYPGYE----MDLLTKNCKAAAGKSPSLIFTNRH----EVRRIDL 267
Query: 176 CDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RST 231
N + I + K+ + LD T ++W D +I MD ++ +
Sbjct: 268 VKRNYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPKEQEV 320
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+I +++ P GL +D + + +YW D G
Sbjct: 321 LIDEQLHSPEGLAVDW------------------------------VHKHIYWTDSGNK- 349
Query: 292 VPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
I A +DG L S L E A+A+D G +Y W+DWG+ +I
Sbjct: 350 ---TISVATVDGGRRRTLFSRNLSEPRAIAVDPLRGFMY-----------WSDWGDQAKI 395
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
E+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL + ++ G R+ +I
Sbjct: 396 EKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTLI 452
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLAKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D +G NR ++ + D ++ P G+
Sbjct: 406 QTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTLISSTDFLSHPFGIA 465
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 466 V----FEDKVFWTD 475
>gi|66082554|ref|NP_150643.2| low-density lipoprotein receptor-related protein 8 isoform 2
precursor [Homo sapiens]
Length = 793
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/303 (35%), Positives = 155/303 (51%), Gaps = 48/303 (15%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCD--LAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+ +CV + CDG+ DC GADE GC L EC H G CS+ C +G CTCP G
Sbjct: 137 TSHKCVPASWRCDGEKDCEGGADEA-GCATWLNECLHNNGGCSHICTDLKIGFECTCPAG 195
Query: 59 EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL 118
L D TC D++EC+ P CSQ+C N KG + C C GY ++ CKA + L
Sbjct: 196 FQLL-DQKTCGDIDECKDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAAGKSPSL 254
Query: 119 IISNRHSILVADL-----------------------------------------EEKGKD 137
I +NRH + DL +K D
Sbjct: 255 IFTNRHEVRRIDLVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASD 314
Query: 138 HRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ Q++++ L EGLA DW+ HIYW DS I V +G R L N+++PR
Sbjct: 315 PKEQEVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRRTLFSRNLSEPRA 374
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ +DP G +++W+DWG+ +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ D
Sbjct: 375 IAVDPLRG--FMYWSDWGDQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVD 432
Query: 257 SKL 259
SKL
Sbjct: 433 SKL 435
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 170/417 (40%), Gaps = 75/417 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHP-TPLGALCTCPPGEIL 61
C++ CDG+ +CP+G+DE C C + C T H P C
Sbjct: 97 HCIHERWKCDGEEECPDGSDESEATCTKQVCPAEKLSCGPTSHKCVPASWRCDGEKDCEG 156
Query: 62 SNDSVTCQD-MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SA 115
D C +NEC G CS +CT+ K + C+C G+ L D TC I+ A
Sbjct: 157 GADEAGCATWLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGDIDECKDPDA 215
Query: 116 AFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEV 175
I N + + D++ G + I + + + RI++
Sbjct: 216 CSQICVNYKGYFKCECYPGYE----MDLLTKNCKAAAGKSPSLIFTNRH----EVRRIDL 267
Query: 176 CDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RST 231
N + I + K+ + LD T ++W D +I MD ++ +
Sbjct: 268 VKRNYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPKEQEV 320
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+I +++ P GL +D + + +YW D G
Sbjct: 321 LIDEQLHSPEGLAVDW------------------------------VHKHIYWTDSGNK- 349
Query: 292 VPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
I A +DG L S L E A+A+D G +Y W+DWG+ +I
Sbjct: 350 ---TISVATVDGGRRRTLFSRNLSEPRAIAVDPLRGFMY-----------WSDWGDQAKI 395
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
E+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL + ++ G R+ +I
Sbjct: 396 EKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTLI 452
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLAKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D +G NR ++ + D ++ P G+
Sbjct: 406 QTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTLISSTDFLSHPFGIA 465
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 466 V----FEDKVFWTD 475
>gi|345800486|ref|XP_003434709.1| PREDICTED: low-density lipoprotein receptor-related protein 8
isoform 2 [Canis lupus familiaris]
Length = 702
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 153/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 184 CVPTLKRCNQEQDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGYQLL 242
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG + C C+ GY ++ CKA+ + LI +N
Sbjct: 243 -DQKTCGDIDECEDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAVAGKSPSLIFTN 301
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D Q
Sbjct: 302 RHEVRRIDLVKRDYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPAEQ 361
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+++V L EGLA DW+ HIYW DS I V +G R L ++++PR + +D
Sbjct: 362 EVLVDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATMDGARRCTLFSRDLSEPRAIAVD 421
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG +IE+ G++G +R T++S I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 422 PLRG--FMYWSDWGYQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLNQRLYWVDSKL 478
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 179/422 (42%), Gaps = 81/422 (19%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGC--DLAECK-HKFGLCSNTCHPT--PLGALCTC 55
+ +CV + CDG+ DC +GADE GC L C+ +F TC PT C
Sbjct: 139 ASHKCVPASWRCDGEKDCESGADEA-GCATSLGTCRGDEFQCGDGTCVPTLKRCNQEQDC 197
Query: 56 PPGEILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH- 113
P G S+++ Q +NEC G CS +CT+ K + C+C GY L D TC I+
Sbjct: 198 PDG---SDEAGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGYQL-LDQKTCGDIDEC 253
Query: 114 ---SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL 170
A I N + + D + V G + I + + +
Sbjct: 254 EDPDACSQICVNYKGYFKCECHPGYE----MDTLTKNCKAVAGKSPSLIFTNRH----EV 305
Query: 171 NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN-- 228
RI++ + + I + K+ + LD T ++W D +I MD ++
Sbjct: 306 RRIDLVKRDYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDP 358
Query: 229 --RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWID 286
+ ++ +++ P GL +D + + +YW D
Sbjct: 359 AEQEVLVDEQLHSPEGLAVDW------------------------------VHKHIYWTD 388
Query: 287 EGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWG 344
G + + A MDG+ L S L E A+A+D G +Y W+DWG
Sbjct: 389 SGNKTISV----ATMDGARRCTLFSRDLSEPRAIAVDPLRGFMY-----------WSDWG 433
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
+IE+ G++G +R T++S I WPNG+TLD+ +R+Y+ DSKL + + G R+
Sbjct: 434 YQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLNQRLYWVDSKLHQLSSIDLSGGNRKM 493
Query: 405 VI 406
+I
Sbjct: 494 LI 495
>gi|307175679|gb|EFN65567.1| Very low-density lipoprotein receptor [Camponotus floridanus]
Length = 1019
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/299 (39%), Positives = 155/299 (51%), Gaps = 45/299 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++L VC+ K DC DE C + EC G CS C P+G C C G L
Sbjct: 465 CISLEYVCNQKPDCIGWEDESADLCGVNECAKNNGGCSQICVDMPIGYRCDCHAGYRLI- 523
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D+ TC D++EC +PG CSQ C N KGS+ CSC GY+ + N T CKA A+ L+ +
Sbjct: 524 DNRTCDDIDECLEPGSCSQFCQNEKGSFKCSCAAGYLKDPRNSTRCKAAEGHAS-LLFAR 582
Query: 123 RHSI--------------------------------LVADLEEKGK-----DHRAQDIVV 145
RH I +D+ EK D + VV
Sbjct: 583 RHDIRKVALDRQEMTAIVNNTKMATALDFVFRTGMIFWSDISEKKIYKAPIDEGNERTVV 642
Query: 146 SGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
DL +GLA DWI HIYW DS + IE+ + G R L +D+I +PR + L+P
Sbjct: 643 IEKDLTTSDGLAVDWIYSHIYWTDSGKDTIELANFEGNMRKTLIQDHIQEPRAIALNPLE 702
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G W+FWTDW + RIER GMDG++RS I+ + WPNGLTLD+ +RVY+ D+KL+ I
Sbjct: 703 G--WMFWTDWSDEARIERAGMDGTHRSVIVGNDVKWPNGLTLDLIGKRVYWVDAKLNII 759
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 129 ADLEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IV 185
A +E G D + ++V + + GL D IG +YW+D++LN I C+ +GT R ++
Sbjct: 714 ARIERAGMDGTHRSVIVGNDVKWPNGLTLDLIGKRVYWVDAKLNIIGSCNYDGTGRRTVL 773
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 236
+ N+ P + + +++WTDW + + G + S K
Sbjct: 774 YSPSNLRHPFSI----TTFEDYVYWTDWDKETIFKANKFTGKEVEAVTSIK 820
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 14/113 (12%)
Query: 296 IGKANMDGSNASILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
I K +D + +V+ ++ AL GM+ FW+D E +I + +
Sbjct: 586 IRKVALDRQEMTAIVNNTKMATALDFVFRTGMI-----------FWSDISEK-KIYKAPI 633
Query: 355 D-GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
D G+ R+ +I + +GL +D +Y+ DS D I+ N++G R+ +I
Sbjct: 634 DEGNERTVVIEKDLTTSDGLAVDWIYSHIYWTDSGKDTIELANFEGNMRKTLI 686
>gi|348511376|ref|XP_003443220.1| PREDICTED: low-density lipoprotein receptor-like [Oreochromis
niloticus]
Length = 921
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/359 (31%), Positives = 183/359 (50%), Gaps = 60/359 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+++ KVCD K DC + +DE CD EC + G CS+ C +G C CPPG L
Sbjct: 286 ECISMEKVCDKKRDCRDWSDEPLRECDSNECLYNNGGCSHICKDLKIGYECLCPPGYSLV 345
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D+ C+D++EC P CSQ+C N GSY C C EGY ++ CKAI + A+L +N
Sbjct: 346 -DTRRCEDIDECANPDTCSQICINQMGSYKCECEEGYQVDPATKHCKAIG-TIAYLFFTN 403
Query: 123 RHSI-------------------LVA-------------DLEEK---------GKDHRAQ 141
H + +VA D+ +K +D
Sbjct: 404 HHEVRKMTLDKSEYTRVIPRLKNVVALDMNMATKEIYWSDISQKKIYKTPMDSAEDSTQH 463
Query: 142 DIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
IV+ +D EG+A+DW+ G++YW DS + V +G+ R L ++++PR +++D
Sbjct: 464 HIVIGNDIDAPEGIAFDWVHGNLYWTDSVRGTVSVVTADGSRRKTLFHQDLSKPRAIVVD 523
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P + +++WTDWG +IE+ G++G +R+ +++ I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 524 PQ--SNFVYWTDWGNPAKIEKAGLNGGDRTALVTDNIMWPNGITLDLLNQRLYWVDSKLH 581
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN-----MDGSNASILVSGQL 314
+ ++++ R+ IDE PL + D SN++IL + +L
Sbjct: 582 TL--------SSIDVQGGGRRTLIIDEHKLAHPLGLAVFEEKVFWTDVSNSAILSANRL 632
>gi|292627062|ref|XP_001920591.2| PREDICTED: low-density lipoprotein receptor-related protein 1 [Danio
rerio]
Length = 4547
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/405 (32%), Positives = 187/405 (46%), Gaps = 92/405 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+CVN T +CD DC +G+DE C + EC K CS C +G C C G L
Sbjct: 2919 KCVNETLLCDNNNDCGDGSDEN-NCFVNECLNSKLSGCSQLCEDLKIGFKCRCNAGFRLK 2977
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D TC D++EC CSQ C NT GS+ C C +G+V D+HT CK+ FLI +
Sbjct: 2978 QDGKTCVDLDECSTVYPCSQRCINTHGSFHCLCVDGFVPRPDDHTSCKSTAEEEPFLIFA 3037
Query: 122 NRHSILVADLE-------EKGKD-------HRAQDIVV---------------------- 145
NR+ + +L+ ++G + H A+ ++
Sbjct: 3038 NRYYLRKLNLDGSNYTLIKQGLNNAVALDYHYAEQMIYWTDVTTQGSMIRRMHINGSNVQ 3097
Query: 146 ----SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+ L +GLA DW+GG++YW D + IEV NG R VL + +PR + +D
Sbjct: 3098 VLHRTSLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRSVLVNSGLREPRAVAVDV 3157
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+W+DWG+ P I RIGMDG++R II KI WPNGLTLD R+Y+AD++ D+
Sbjct: 3158 RNG--YLYWSDWGDVPHIGRIGMDGTDRQIIIQDKITWPNGLTLDFINDRIYWADAREDY 3215
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I A++DGSN +++ + A+
Sbjct: 3216 ----------------------------------IAFASLDGSNRHTVLNHDIPHIFAMT 3241
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD-GSNRSTIIST 365
L +Y WTDW E I R G+N++ +IST
Sbjct: 3242 LFEEFIY-----------WTDW-ETKSINRAHKTLGTNKTLLIST 3274
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 166/329 (50%), Gaps = 53/329 (16%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
D C++L+K+CDG DC +G DEGP C K C C T G C C G +
Sbjct: 92 TDVCIHLSKLCDGVPDCTDGRDEGPHCRELASKCSIMDCQYNCSVTLSGPKCYCKNGYEV 151
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFL 118
D TC+D NEC G CSQ CTN++GSY CSC EGY+ + DN +CKA N FL
Sbjct: 152 GEDGKTCKDFNECAVYGTCSQTCTNSEGSYTCSCVEGYLPQLDNRSCKAKNDPVDRLPFL 211
Query: 119 IISNRHSILVADLEEKG------KDHRAQDIVVS-------------------------- 146
+I+N +I L K D + +
Sbjct: 212 LIANSQNIQATSLSGANPITINDKQTTTMDFIYAQETVCWIHMGDSPTASQLKCAKFPNA 271
Query: 147 -------------GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
L +E +A DW+ G+ Y++D+ +RI VC ++G+ ++L +
Sbjct: 272 KSFTEEKTINISLSLHHMEQMAIDWLTGNFYFVDNVDDRIFVCSKDGSICVILLDMELYS 331
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +PNG+TLD+A + VY
Sbjct: 332 PKGIALDPAMGK--VFFTDYGQTPKVERCDMDGQNRTKLVDSKIVFPNGITLDLANKLVY 389
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
+ D+ LD+I+ E K N TI + L
Sbjct: 390 WTDAYLDYIEVVDYEGK---NRHTIIQGL 415
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 145/304 (47%), Gaps = 51/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDGK DCP+ +DE C+L C + G CS+ C P G LC+CP G L
Sbjct: 1163 CLPPEKLCDGKDDCPDASDEKL-CNL--CTVENGGCSHNCTIAPGEGVLCSCPAGMELGT 1219
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K + C+C EG+ L D +CK+ + F+I SNR
Sbjct: 1220 DNKTCQIQSFCAKHLKCSQRCVQEKATVKCACYEGWALGPDGESCKSTDPFKPFIIFSNR 1279
Query: 124 HSILVAD------------------------------------------LEEKGKDHRAQ 141
H I D L E G +
Sbjct: 1280 HEIRRIDLYKGEFSVLVPGLRNTIALDFHFNQSSLYWTDVVEDKIYRGKLSENGALTSFE 1339
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L + PR + LDP
Sbjct: 1340 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMRTTLLAGEVEHPRAIALDP 1399
Query: 202 SPGTRWLFWTDW-GENPRIERIGMDGSNRSTIISTKIY--WPNGLTLDIATRRVYFADSK 258
G LFWTDW +PRIE M G R TI WPNGLT+D RR+ + D++
Sbjct: 1400 RDGI--LFWTDWDASSPRIEAASMSGEGRRTIHKETGIGGWPNGLTVDYLERRILWIDAR 1457
Query: 259 LDFI 262
D I
Sbjct: 1458 SDAI 1461
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 188/430 (43%), Gaps = 88/430 (20%)
Query: 11 VCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQD 70
CDG+ DC + +DE P +C C++T G C +L +++ C D
Sbjct: 2881 ACDGEFDCRDQSDEAP--KNLQCTDTESRCNDTAFLCSSGK---CVNETLLCDNNNDCGD 2935
Query: 71 --------MNEC--EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
+NEC + CSQ+C + K + C CN G+ L+ D TC ++ +
Sbjct: 2936 GSDENNCFVNECLNSKLSGCSQLCEDLKIGFKCRCNAGFRLKQDGKTCVDLDECSTVYPC 2995
Query: 121 SNR--------HSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNR 172
S R H + V + DH + + I + Y+L +LN
Sbjct: 2996 SQRCINTHGSFHCLCVDGFVPRPDDHTSCKSTAEEEPFL-------IFANRYYL-RKLNL 3047
Query: 173 IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD-WGENPRIERIGMDGSNRST 231
+G+N L K + + LD + ++WTD + I R+ ++GSN
Sbjct: 3048 ------DGSN-YTLIKQGLNN--AVALDYHYAEQMIYWTDVTTQGSMIRRMHINGSNVQV 3098
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+ T + P+GL +D + LYW D+G +
Sbjct: 3099 LHRTSLSNPDGLAVDW------------------------------VGGNLYWCDKGRDT 3128
Query: 292 VPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ + + ++G+ S+LV+ L E A+A+D+ NG LY W+DWG+ P I
Sbjct: 3129 IEV----SKLNGAYRSVLVNSGLREPRAVAVDVRNGYLY-----------WSDWGDVPHI 3173
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
RIGMDG++R II KI WPNGLTLD R+Y+AD++ D+I F + DG+ R V+ D
Sbjct: 3174 GRIGMDGTDRQIIIQDKITWPNGLTLDFINDRIYWADAREDYIAFASLDGSNRHTVLNHD 3233
Query: 410 LMVEFTNDLM 419
+ F L
Sbjct: 3234 IPHIFAMTLF 3243
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 111/237 (46%), Gaps = 47/237 (19%)
Query: 78 GYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T S C C GY L+ +C+ + +FL+ S I L+ K
Sbjct: 1858 GDCSQLCLPTSPSTRACMCTAGYSLKSGQQSCEGM---GSFLLYSVHEGIRGIPLDPSDK 1914
Query: 137 ----------------DHRA-------------------------QDIVVSGLDLVEGLA 155
D A +DIV +G+ VEG+
Sbjct: 1915 SDALVPVSGTSLAVGIDFHADNDTIYWVDMGLSTISRAKRDQTWREDIVTNGIGRVEGIT 1974
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1975 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISHGLDKPRAIAVHPEKG--YLFWTEWGQ 2032
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN 272
PRIER +DGS R +++ I WPNG+++D +Y+ D++ D I+ +LE N
Sbjct: 2033 YPRIERSRLDGSERVVLVNVSISWPNGISIDYQEGLLYWCDARTDKIERINLETGEN 2089
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 83/151 (54%), Gaps = 8/151 (5%)
Query: 112 NHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN 171
+ S+A SN H + + ++ + GL + G+A DW+ G++YW DS +
Sbjct: 3932 SQSSASGPTSNSHR------HTRQSEGTVSNLEIPGLKMPRGIAVDWVAGNLYWTDSGRD 3985
Query: 172 RIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRST 231
IEV G +R L I +P +++DP GT ++WTDWG +P+IE MDG+ R T
Sbjct: 3986 VIEVAQITGQHRKTLISGMIDEPHAIVVDPQRGT--MYWTDWGNHPKIETAAMDGTLRQT 4043
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
++ I WP GL +D R+Y+ADSKL I
Sbjct: 4044 LVHENIQWPTGLAVDYFNERLYWADSKLSVI 4074
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 164/437 (37%), Gaps = 109/437 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGE----- 59
C++ CDG+ DCP+G+DE P + CH T + CPP E
Sbjct: 50 CISKGWRCDGEKDCPDGSDESP---------------DICHHTQVTQ---CPPNEFECRG 91
Query: 60 --ILSNDSVTCQDMNEC-----------EQPGYCSQM-----CTNTKGSYICSCNEGYVL 101
+ + S C + +C E CS M C+ T C C GY +
Sbjct: 92 TDVCIHLSKLCDGVPDCTDGRDEGPHCRELASKCSIMDCQYNCSVTLSGPKCYCKNGYEV 151
Query: 102 EYDNHTCKAINHSAAFLIIS----NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYD 157
D TCK N A + S N E + D V+ L +
Sbjct: 152 GEDGKTCKDFNECAVYGTCSQTCTNSEGSYTCSCVEGYLPQLDNRSCKAKNDPVDRLPF- 210
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP 217
L + I+ +G N I + T +D + W G++P
Sbjct: 211 -------LLIANSQNIQATSLSGANPITINDKQTT-----TMDFIYAQETVCWIHMGDSP 258
Query: 218 RIERI-------GMDGSNRSTI-ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEI 269
++ + TI IS ++ + +D T YF D+ D
Sbjct: 259 TASQLKCAKFPNAKSFTEEKTINISLSLHHMEQMAIDWLTGNFYFVDNVDD--------- 309
Query: 270 KTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
+I + DGS IL+ +LY + L+ M
Sbjct: 310 -------------------------RIFVCSKDGSICVILLDMELYSPKGIALDPAMGK- 343
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
+F+TD+G+ P++ER MDG NR+ ++ +KI +PNG+TLD+A + VY+ D+ L
Sbjct: 344 --------VFFTDYGQTPKVERCDMDGQNRTKLVDSKIVFPNGITLDLANKLVYWTDAYL 395
Query: 390 DFIDFCNYDGTGRQQVI 406
D+I+ +Y+G R +I
Sbjct: 396 DYIEVVDYEGKNRHTII 412
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 110/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FLI
Sbjct: 492 KPGGCSDICLLANSHKTRTCRCRSGFSLGSDGKSCKKPEHEL-FLIYGKGRPGVIRGMDM 550
Query: 120 ---ISNRHSILVADLE-------------------------EKGKDHRAQDIVVS-GLDL 150
+ + H + + +L + D +DI+V G+
Sbjct: 551 HSTVYDEHIVPIENLNNPRALDFHAETEFIYFADATSYIIGRQKLDGTERDIIVKDGIHT 610
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DPS G
Sbjct: 611 VEGIAVDWMGQNLYWTDDGPKKTISVAKLEKASQTRKTLIEGKMTHPRAIVVDPSHGM-- 668
Query: 208 LFWTDWGENPR------IERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++W+DW E P+ I + MDGSN ++++K + WPNGL+LDI +Y+ D+ D
Sbjct: 669 MYWSDWEEEPKEMNRGSIRKAWMDGSNAGILLTSKTVLWPNGLSLDIQQGLLYWVDAYYD 728
Query: 261 FID 263
I+
Sbjct: 729 RIE 731
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 169/416 (40%), Gaps = 66/416 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ +K+CDG +C + +DE A C ++ +TC C G+ +S +
Sbjct: 3713 CLTRSKLCDGVDNCGDNSDE------ASCDYE-----STCDKDQF----RCTNGKCISAN 3757
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
+ C N+CE G C C N+ + D C +
Sbjct: 3758 -LRCNFFNDCEDYGSDEIGCKTDTMLNDCKSNKSLCGDGDEAHCVSNGTDTFCSCKPGFQ 3816
Query: 125 SILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
S+ E+K D Q V S + +Y H Y+ +R+N C +GTN+
Sbjct: 3817 SVRHNTCEDK--DECKQFGVCSHVCNNTKGSYK-CSCHKYF--TRINH--TCKADGTNKQ 3869
Query: 185 VLAKDNITQPRGMMLDPSPG-TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
VL + + R + +PG W++ + + + MD + + +I+W N
Sbjct: 3870 VLYIADDNEIRSL----NPGMPNWVYEQTFQGDNNVRIDAMD----LHVKTNRIFWTNWH 3921
Query: 244 TLDIAT-----------------RRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWID 286
T I+ R ++ + ++ L++ + + LYW D
Sbjct: 3922 TYGISCFQLPSQSSASGPTSNSHRHTRQSEGTVSNLEIPGLKMPRGIAVDWVAGNLYWTD 3981
Query: 287 EGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWG 344
G + + + A + G + L+SG + E A+ +D + G +Y WTDWG
Sbjct: 3982 SGRDVIEV----AQITGQHRKTLISGMIDEPHAIVVDPQRGTMY-----------WTDWG 4026
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
+P+IE MDG+ R T++ I WP GL +D R+Y+ADSKL I DG+
Sbjct: 4027 NHPKIETAAMDGTLRQTLVHENIQWPTGLAVDYFNERLYWADSKLSVISSVRLDGS 4082
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 135/332 (40%), Gaps = 56/332 (16%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N ++ C+C L+ D HTC FL+ + + I D++
Sbjct: 1550 GPCSHLCLINYNQTFSCACPHLMKLKADKHTCYEYRQ---FLLYARQIEIRGVDIDNPYY 1606
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V + YD + IYW D R I+ NGT + ++ +G
Sbjct: 1607 NYIIS-FTVPDIDNVTVVDYDALEHRIYWSDVRTQTIKRAFINGTGVETVVSADLPNAQG 1665
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ +I +
Sbjct: 1666 LAVDWI--SRNLFWTSYDTNKKQINVARLDGSFKNAVIHGQ------------------- 1704
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
LD C L I KLYW+D G N I ANMDG+N ++L + Q
Sbjct: 1705 --GLDKPHCLVLH--------PILGKLYWLD-GDN-----ISMANMDGTNHTLLFTNQKG 1748
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
L++D ++ LY+ + + N I MDGS I S K
Sbjct: 1749 PVGLSIDFDSEQLYWISSR------------NSTINHCKMDGSGLEVIESVKGKLTKATA 1796
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
L I ++++AD D I C+ G +V+
Sbjct: 1797 LAIMGDKLWWADQSTDQIGTCDKSDGGNWKVL 1828
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N II I PNGL +D ++YF+D+ D
Sbjct: 2343 ECQDLMFWTNWNEQSPSIMRASLSGANVLVIIGNNIRTPNGLAIDHRAEKLYFSDATFDK 2402
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
I+ C YDG+ R V+ + + F + GD
Sbjct: 2403 IERCEYDGSRRFVVLKNEPVHPFGLAVYGD 2432
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
A + S+ H + + + G D + +V + VEGLAY +YW + I
Sbjct: 2254 ANRIFYSDIHFGNIQHINDDGSDRKT---IVDNVGSVEGLAYHRGWDTLYWTSYTTSTIT 2310
Query: 175 VCDENGTNRIVLAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGS 227
+ + +D + PR +LD +FWT+W E +P I R + G+
Sbjct: 2311 RHTVDQSRSGAFDRDTVVTMSGDDHPRAFVLDEC--QDLMFWTNWNEQSPSIMRASLSGA 2368
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
N II I PNGL +D ++YF+D+ D I+
Sbjct: 2369 NVLVIIGNNIRTPNGLAIDHRAEKLYFSDATFDKIE 2404
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 22/146 (15%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN +++ G L A+ALD +Y+ + ++WTD + I R+ ++G
Sbjct: 3044 KLNLDGSNYTLIKQG-LNNAVALDY-----HYAE----QMIYWTDVTTQGSMIRRMHING 3093
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3094 SNVQVLHRTSLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRSVLVNSGLREPR-- 3151
Query: 417 DLMGDNGVPALALDLENGMLYYSTEG 442
A+A+D+ NG LY+S G
Sbjct: 3152 ---------AVAVDVRNGYLYWSDWG 3168
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 140/386 (36%), Gaps = 100/386 (25%)
Query: 121 SNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG 180
+N+ I VA L+ K+ I GLD L I G +YWLD + I + + +G
Sbjct: 1682 TNKKQINVARLDGSFKNAV---IHGQGLDKPHCLVLHPILGKLYWLDG--DNISMANMDG 1736
Query: 181 TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST----- 235
TN +L N P G+ +D + L+W N I MDGS I S
Sbjct: 1737 TNHTLLFT-NQKGPVGLSIDFD--SEQLYWIS-SRNSTINHCKMDGSGLEVIESVKGKLT 1792
Query: 236 ----------KIYWPNGLTLDIAT---------RRVYFADSKLDFI-------------- 262
K++W + T I T + + + S + +
Sbjct: 1793 KATALAIMGDKLWWADQSTDQIGTCDKSDGGNWKVLRYHTSPMMHMKIYNESVHQIGTNL 1852
Query: 263 ------DCKSLEIKTN---------VNYSTIFRK----------LYWIDEGGNGVPLKIG 297
DC L + T+ YS + LY + EG G+PL
Sbjct: 1853 CSKNNGDCSQLCLPTSPSTRACMCTAGYSLKSGQQSCEGMGSFLLYSVHEGIRGIPLDPS 1912
Query: 298 KANMDGSNASILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG 356
D S+A + VSG L + +N +Y W D G + I R D
Sbjct: 1913 ----DKSDALVPVSGTSLAVGIDFHADNDTIY-----------WVDMGLS-TISRAKRDQ 1956
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
+ R I++ I G+T+D +Y+ D D I+ +G+ R VI
Sbjct: 1957 TWREDIVTNGIGRVEGITVDWIAGNIYWTDQGFDVIEVARLNGSFRYVVI---------- 2006
Query: 417 DLMGDNGVPALALDLENGMLYYSTEG 442
G + A+A+ E G L+++ G
Sbjct: 2007 -SHGLDKPRAIAVHPEKGYLFWTEWG 2031
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ + + GLA D +Y+ D+ ++IE C+ +G+ R V+ K+ P G+ +
Sbjct: 2373 IIGNNIRTPNGLAIDHRAEKLYFSDATFDKIERCEYDGSRRFVVLKNEPVHPFGLAV--- 2429
Query: 203 PGTRWLFWTDWGENP--RIERIGMD 225
++FWTDW R ++ G D
Sbjct: 2430 -YGDYIFWTDWVRRAVLRADKYGRD 2453
>gi|432951919|ref|XP_004084924.1| PREDICTED: low-density lipoprotein receptor-related protein 4-like,
partial [Oryzias latipes]
Length = 455
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 153/304 (50%), Gaps = 47/304 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ KVC+ DC +G DE P D C G CS C CTC
Sbjct: 140 RCIGQRKVCNDVNDCGDGTDEHPHHDCRPRSSDGNCNQNNGGCSQKCQMLRGLVQCTCHT 199
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L D +CQD++EC GYCSQ CTNT+G + C C +GY L D +CKA+
Sbjct: 200 GYRLLEDGKSCQDVDECAVEGYCSQGCTNTEGGFQCWCVQGYDLRPDKRSCKALG-PEPV 258
Query: 118 LIISNR------------HSILVADLEE--------------------------KGKDHR 139
L+ +NR +++L+ +LE
Sbjct: 259 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHNLELVFWSDVTLDRIMKANLNGSN 318
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DWI +YW DS +RIEV + +GT+R VL ++ +PR + L
Sbjct: 319 VEEVVSTGLESPGGLAIDWIHDKLYWTDSGTSRIEVANLDGTHRKVLLWQHMEKPRAIAL 378
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G ++WTDWG PRIE MDGSNR I T ++WPNGLT+D A+RR+Y+ D+K
Sbjct: 379 HPIEGK--IYWTDWGNTPRIEYANMDGSNRRVIADTHLFWPNGLTIDYASRRIYWVDAKH 436
Query: 260 DFID 263
I+
Sbjct: 437 HVIE 440
>gi|321462894|gb|EFX73914.1| hypothetical protein DAPPUDRAFT_307561 [Daphnia pulex]
Length = 4592
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 178/414 (42%), Gaps = 100/414 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCP--PGEIL 61
RC++ + +C+GK DC +G+DE C C H CS+ CH P G +C+CP G L
Sbjct: 1027 RCIDASLLCNGKADCTDGSDESDRCSEKLCSHAHD-CSHVCHNAPEGVVCSCPLDSGLTL 1085
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
NDS TC + CEQ G CSQ+C + + C+C GY + D TCK+ + S ++I S
Sbjct: 1086 GNDSKTCSISHPCEQWGTCSQLCIPVRSKHHCACFPGYEKQPDGFTCKSTDPSTPYIIFS 1145
Query: 122 NRHSILVADLEEKG--------KDHRAQD------------------------------- 142
NRH + DL K+ A D
Sbjct: 1146 NRHELRGIDLHTHNVKALISSLKNTIALDFYHSSEADVIFWTDVVDDKIYRGTLVGGSLT 1205
Query: 143 ----IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
+V +GL EGLA DWIG ++YW++S L++IEV NG+ R L N+ PR +
Sbjct: 1206 NIEVVVQTGLATAEGLAVDWIGENLYWVESNLDQIEVAKLNGSFRRTLIAGNMESPRAIA 1265
Query: 199 LDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY----WPNGLTLDIATRRVY 253
LDP G LFWTDW +PRIE M G R ++ WPNGLTLD R+Y
Sbjct: 1266 LDPRHGI--LFWTDWESGHPRIESCSMSGDGRKVVVRVDAVSDGAWPNGLTLDYGAERIY 1323
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+ D++ D I A DG++ ++ G
Sbjct: 1324 WIDARSD----------------------------------SIHTAKYDGTDPREIIRGH 1349
Query: 314 --LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
L A+ L +Y WTDW N I +GS+ + I T
Sbjct: 1350 ETLSHPFAIALFENHVY-----------WTDWRTNSVIRANKWNGSDVTVIQRT 1392
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 190/412 (46%), Gaps = 92/412 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EILSN 63
CVN +CDG+ DC + +DE C++ EC+ C++TC P+G C C G +
Sbjct: 2819 CVNSALLCDGRNDCGDFSDENK-CNVNECE-PINPCAHTCVDKPVGFECQCNEGYKTNPK 2876
Query: 64 DSVTCQDMNECE-QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D + C D++EC P CSQ+C NT GSYICSC +G+ + ++ CK + A ++ SN
Sbjct: 2877 DPLLCADVDECALHPRPCSQICRNTIGSYICSCTDGFAI-HNGTGCKTNSSIAPTVLFSN 2935
Query: 123 RHSILVADLEEKGKDHRAQDIV-------------------------------------- 144
R+ I L + RA ++
Sbjct: 2936 RYYIREVHLHSRVASVRAHNLTNAVALDYDWLEQCLYWSDVTEYGSSLKRLCGNDTSQDQ 2995
Query: 145 -----VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+ L +GLA DW+G ++YW D + + IEV +G R +L + + +PR + L
Sbjct: 2996 QQTLHSATLQNPDGLAVDWVGRNLYWCDKKTDTIEVSKLDGRFRKILLHEGLQEPRAIAL 3055
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DPS G +L+WTDWG+ I ++G+DGS I++T + WPN L + T V++AD++
Sbjct: 3056 DPSQG--YLYWTDWGDKAHIGKVGLDGSQPRVIVNTSLGWPNALAISYETNEVFWADARE 3113
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D+I LE G +I + D +NA +L+ A
Sbjct: 3114 DYIAVADLE----------------------GRNPRIVLSRGDNTNA------RLHHIFA 3145
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWP 370
L + +Y WTDW E +E+ +G +R TII+T I+ P
Sbjct: 3146 LTVFEDSIY-----------WTDW-ETKSVEKCHKYNGGDRETIITT-IHRP 3184
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 168/355 (47%), Gaps = 65/355 (18%)
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
+D + ++ GLD VEGLA DWI G++YW + + + IEV + NG+ + V+ ++ +P
Sbjct: 1838 RDGTGRQVIAQGLDSVEGLAIDWIAGNMYWTNPKFDVIEVANVNGSFKYVVVAGDMDKPM 1897
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +DP G +LFWTD G PRIER+ +DGS+R +++ I++ GLTLD ++VY+
Sbjct: 1898 AIAVDPVAG--FLFWTDRGRTPRIERVRLDGSDRRVLVNESIFFTTGLTLDYQNKKVYWC 1955
Query: 256 DSKLDFIDC--------KSLEIKTNVNYS---TIFR-KLYWID---EGG--NGVP----- 293
DS+LD I+ + L KT++ +++R +++WID +GG N P
Sbjct: 1956 DSRLDTIESMDYDGGNRQVLLDKTHLENPQGISVYRDQIFWIDTTQDGGTLNQAPTSNVS 2015
Query: 294 ---------------LKI-GKANMDGSNASILVSGQLYE-------ALALDLENGMLYYS 330
+K+ K +G+N + +G E + +G +
Sbjct: 2016 DHQVVLSQLGESLKDIKVYSKERQEGTNPCSIHNGDCKELCLFNGSSAVCACAHGQVSAD 2075
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTI----ISTKIYWPN--GLTLDIATRRVYF 384
C + + + RI+ I + +N I +K + N GL D R +++
Sbjct: 2076 GRDCEEFDAFVVYSRMTRIDSIHISDANNFNAPFPSIESKEFIRNVIGLGYDYQRRLIFY 2135
Query: 385 ADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYS 439
+D + I+ ++GT + + MVE LA D ++ LY++
Sbjct: 2136 SDIQRGSINSVYFNGTRHKVIAEKQGMVE------------GLAYDSKDDSLYWT 2178
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 145/310 (46%), Gaps = 71/310 (22%)
Query: 40 CSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY 99
C + C P+ G LC C G + C D +EC G C Q+CTN+ GS+ C C GY
Sbjct: 9 CQHGCKPSADGPLCFCKEGS--QPNGTDCVDADECAVEGSCDQLCTNSNGSFSCDCVGGY 66
Query: 100 VLEYDNHTCKAINHS----AAFLII-----------------SNRHSILVADLEEKGK-D 137
+ D C A+N A+ L++ ++RH+ + + + +
Sbjct: 67 --QKDGQRCHALNEPENELASLLLVTSIDVRHVHLNGTPINGASRHATVETQVSTTLEFN 124
Query: 138 HRAQ--------------------DIVVS---------GLDLVEGLAYDWIGGHIYWLDS 168
HR + D+ VS L+ V +A DW+ G+ Y+LD
Sbjct: 125 HRNRTVCWLYHLVPMVVLRCALVADLTVSWDLPPPTMFSLNTVSQVALDWVSGNWYFLDD 184
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN-PRIERIGMDGS 227
I +C+ T + + N+ +PR + LDP G ++F+T +G N PRIER G+DGS
Sbjct: 185 NKELIFLCNSTLTICTTVVEVNLNKPRALALDPPNG--FMFFTVFGYNSPRIERAGLDGS 242
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE------------IKTNVNY 275
NR +++S K+ +P GL LD+A +Y+ D+ LD I+ S + ++T + Y
Sbjct: 243 NRQSVVSDKVVYPVGLALDLANSYIYWIDTYLDVIERASYDGTKRETVKKGYLVRTMIKY 302
Query: 276 STIFRKLYWI 285
S + R LY I
Sbjct: 303 SGV-RNLYGI 311
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 32/296 (10%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLG-ALCTCPPGEILS 62
C+N + CDG DC +G+DE + C FG CS C G C C PG +
Sbjct: 3660 HCINGSMACDGFNDCGDGSDEIDCRSPSVCS--FGKCSQLCVEKKGGNHSCICAPG--FA 3715
Query: 63 NDSVTCQDMNECEQPGYCSQM--CTNTKGSYICSCNEGYVLE---------------YDN 105
S C G SQ+ ++ K + G + + + N
Sbjct: 3716 AMSTGANKPKTCLADGDASQLLIASDNKLRRLSPFKAGDISDSVFSPGSIRIEAADVFYN 3775
Query: 106 HTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQ--------DIVVSGLDLVEGLAYD 157
T + S+ +R+ + + L + Q + +++GL+ GLA D
Sbjct: 3776 ATELIVFWSSPHNKSIHRYDMAASTLHQSSNLEDTQISSRRGKTETLLTGLEDPRGLAVD 3835
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP 217
W G ++YW+D + V +G R L ++ QP +++DP G+ +FW+D G N
Sbjct: 3836 WFGFNLYWVDGTHKLVGVISFDGLLRRHLISSDLDQPHDIVVDPLSGS--MFWSDLGLNA 3893
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
RIE MDGS R ++ + I +P GL +D RR+Y+AD K ++ +LE K V
Sbjct: 3894 RIETARMDGSLRRLLVDSDILYPTGLAIDYPARRLYWADPKTGTLESVNLEGKDRV 3949
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 46/207 (22%)
Query: 207 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKS 266
+++W D ++ I RI DG+ R +I+ + GL +D +Y+ + K D I+
Sbjct: 1822 YIYWVD-SDHGSIVRIRRDGTGRQ-VIAQGLDSVEGLAIDWIAGNMYWTNPKFDVIE--- 1876
Query: 267 LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGM 326
AN++GS ++V+G + + +A+ ++
Sbjct: 1877 -------------------------------VANVNGSFKYVVVAGDMDKPMAIAVD--- 1902
Query: 327 LYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 386
+LFWTD G PRIER+ +DGS+R +++ I++ GLTLD ++VY+ D
Sbjct: 1903 ------PVAGFLFWTDRGRTPRIERVRLDGSDRRVLVNESIFFTTGLTLDYQNKKVYWCD 1956
Query: 387 SKLDFIDFCNYDGTGRQQVILIDLMVE 413
S+LD I+ +YDG G +QV+L +E
Sbjct: 1957 SRLDTIESMDYDG-GNRQVLLDKTHLE 1982
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 117/273 (42%), Gaps = 57/273 (20%)
Query: 58 GEILSNDSVTCQDMNECEQP-----GYCSQMCTNTKGSYICSCNEGYVL-------EYDN 105
GE L + V ++ E P G C ++C S +C+C G V E+D
Sbjct: 2025 GESLKDIKVYSKERQEGTNPCSIHNGDCKELCLFNGSSAVCACAHGQVSADGRDCEEFDA 2084
Query: 106 -------------HTCKAINHSAAFLIISN---------------RHSILVADLEE---- 133
H A N +A F I + R I +D++
Sbjct: 2085 FVVYSRMTRIDSIHISDANNFNAPFPSIESKEFIRNVIGLGYDYQRRLIFYSDIQRGSIN 2144
Query: 134 ----KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL---DSRLNRIEVCDENGTNRIVL 186
G H+ ++ +VEGLAYD +YW DS +++ + +N T V+
Sbjct: 2145 SVYFNGTRHK---VIAEKQGMVEGLAYDSKDDSLYWTCNSDSTISKAVLSHKNATVEKVV 2201
Query: 187 AKDNITQPRGMMLDPSPGTRWLFWTDW-GENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
+PRG+ LDP ++WT+W NP I+R G + +II+T I PN L L
Sbjct: 2202 RLTTEDKPRGIALDPCDSR--VYWTNWNSRNPGIQRAYYTGFDVQSIITTDIRMPNALAL 2259
Query: 246 DIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
D+ +++Y++D++LD ++ L+ K V S +
Sbjct: 2260 DLVAQKLYWSDARLDKMERADLDGKNRVVLSKV 2292
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 123/264 (46%), Gaps = 27/264 (10%)
Query: 184 IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+V A+ + + + L PS W P I +G+ G++ + S IY+ + L
Sbjct: 426 LVYAQGKPSMIKSVGLTPS-------WHQQAMVP-ITEVGLVGAHDFHVASQSIYFSDRL 477
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK----IGKA 299
L I +++ + ++ + L+ + + R +YW DEG + + + +A
Sbjct: 478 RLTIERQKIDGSSRQVLLE--QGLDSCQGLAIDWMSRNIYWTDEGRGAISVSRLDSLEEA 535
Query: 300 NMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNR 359
N+ S +L+S ++ +D + G++Y+S + + D I+R MDG++
Sbjct: 536 NL--SKRRLLISVPHPRSIVVDPKRGLMYWSQWESVVQVSVLDINTPATIQRAWMDGTHI 593
Query: 360 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLM 419
++ ++WPNGLT+D A +++Y+ D L I+ N DGT R+ L+ + +L
Sbjct: 594 EVLVRQNLHWPNGLTIDYAGKKMYWCDVHLGRIERINLDGTNRE------LIASASENLH 647
Query: 420 GDNGVPALALDLENGMLYYSTEGA 443
G L L + LY++ + A
Sbjct: 648 RPYG-----LALSDSFLYWTEKDA 666
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 15/104 (14%)
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLT 374
ALALD NG ++F+T +G N PRIER G+DGSNR +++S K+ +P GL
Sbjct: 211 RALALDPPNG-----------FMFFTVFGYNSPRIERAGLDGSNRQSVVSDKVVYPVGLA 259
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQV---ILIDLMVEFT 415
LD+A +Y+ D+ LD I+ +YDGT R+ V L+ M++++
Sbjct: 260 LDLANSYIYWIDTYLDVIERASYDGTKRETVKKGYLVRTMIKYS 303
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 61/211 (28%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLD--------SRLNRIEVCDENGTNRIVLAKDNIT 192
Q ++ GLD +GLA DW+ +IYW D SRL+ +E + N + R +L ++
Sbjct: 492 QVLLEQGLDSCQGLAIDWMSRNIYWTDEGRGAISVSRLDSLE--EANLSKRRLLI--SVP 547
Query: 193 QPRGMMLDPSPGTRWLFWTDW-----------GENPRIERIGMDGSNRSTIISTKIYWPN 241
PR +++DP G ++W+ W I+R MDG++ ++ ++WPN
Sbjct: 548 HPRSIVVDPKRG--LMYWSQWESVVQVSVLDINTPATIQRAWMDGTHIEVLVRQNLHWPN 605
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
GLT+D A +++Y+ D L +I + N+
Sbjct: 606 GLTIDYAGKKMYWCDVHLG----------------------------------RIERINL 631
Query: 302 DGSNASILVSGQ--LYEALALDLENGMLYYS 330
DG+N ++ S L+ L L + LY++
Sbjct: 632 DGTNRELIASASENLHRPYGLALSDSFLYWT 662
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 167/446 (37%), Gaps = 121/446 (27%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ T+VCD DC +G+DE P A C+ + GLC L C G + N
Sbjct: 3619 CIPQTEVCDNYKDCEDGSDEEP----AVCQAQ-GLC--------LPHQFRCRSGHCI-NG 3664
Query: 65 SVTCQDMNEC---------EQP-----GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110
S+ C N+C P G CSQ+C KG NH+C
Sbjct: 3665 SMACDGFNDCGDGSDEIDCRSPSVCSFGKCSQLCVEKKGG--------------NHSCIC 3710
Query: 111 INHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL 170
AA +N+ +AD + A ++++ + + L+ + G I DS
Sbjct: 3711 APGFAAMSTGANKPKTCLADGD-------ASQLLIASDNKLRRLS-PFKAGDIS--DSVF 3760
Query: 171 N----RIEVCD--ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGM 224
+ RIE D N T IV FW+ N I R M
Sbjct: 3761 SPGSIRIEAADVFYNATELIV-----------------------FWSS-PHNKSIHRYDM 3796
Query: 225 DGS---NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRK 281
S S + T+I G T + T LE +
Sbjct: 3797 AASTLHQSSNLEDTQISSRRGKTETLLT----------------GLEDPRGLAVDWFGFN 3840
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA--LALDLENGMLYYSTLKCTRWLF 339
LYW+D G +G + DG L+S L + + +D +G + F
Sbjct: 3841 LYWVD----GTHKLVGVISFDGLLRRHLISSDLDQPHDIVVDPLSGSM-----------F 3885
Query: 340 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
W+D G N RIE MDGS R ++ + I +P GL +D RR+Y+AD K ++ N +G
Sbjct: 3886 WSDLGLNARIETARMDGSLRRLLVDSDILYPTGLAIDYPARRLYWADPKTGTLESVNLEG 3945
Query: 400 TGRQQVILIDLMVE---FTNDLMGDN 422
R V L +E F D+ D+
Sbjct: 3946 KDRVVVRRFRLSIEDKPFKVDIFEDS 3971
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 134/320 (41%), Gaps = 65/320 (20%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTN--RIVLAKDNITQPRGMMLDPSPGTRWLFW 210
GL D+ IYW+D+R + I +GT+ I+ + ++ P + L ++W
Sbjct: 1312 GLTLDYGAERIYWIDARSDSIHTAKYDGTDPREIIRGHETLSHPFAIAL----FENHVYW 1367
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID------- 263
TDW N I +GS+ + I T LT + ++ + DF +
Sbjct: 1368 TDWRTNSVIRANKWNGSDVTVIQRT-------LTQPFDIQILHPSRQPSDFKNPCGTKNG 1420
Query: 264 -CKSLEIKTNVNYSTIFR----KLYWIDEGGNGV-----------PLKIGKANMDGSNAS 307
C L + +N++ +R + + E G P +I ++D
Sbjct: 1421 NCSHLCL---LNFNGTYRCHCPHVMKLAEDGRSCIRNERVLLFSRPNEIRGVDLDNPYYH 1477
Query: 308 ILVS---GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
I+ Q+ +A+ LD +Y R +FW D N ++R+G+ GS T+I
Sbjct: 1478 IIPPISLPQVLQAVQLD------FYGQ---ERRIFWVDAQLN-EVKRVGLVGSPIETVID 1527
Query: 365 TKIYWPNGLTLDIATRRVYF--ADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
T I P+G+ +D +R ++F +D + I C+ DG ++I D+
Sbjct: 1528 TAIKNPHGMAIDWLSRNLFFSSSDGTRNHISVCSLDGEYVTRIIEEDVY----------- 1576
Query: 423 GVPALALDLENGMLYYSTEG 442
V ++A+D G L++S G
Sbjct: 1577 QVRSMAVDPTQGKLFWSETG 1596
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 107/254 (42%), Gaps = 59/254 (23%)
Query: 166 LDSRLNRIEVCDENGTNRIVLAKDNITQP-RGMMLDPSPGTRWLFWTDWGENPRIERIGM 224
L SR N I D + ++ ++ Q + + LD R +FW D N ++R+G+
Sbjct: 1459 LFSRPNEIRGVDLDNPYYHIIPPISLPQVLQAVQLDFYGQERRIFWVDAQLN-EVKRVGL 1517
Query: 225 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYW 284
GS T+I T I P+G+ +D +R ++F+ S
Sbjct: 1518 VGSPIETVIDTAIKNPHGMAIDWLSRNLFFSSS--------------------------- 1550
Query: 285 IDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTD 342
+G I ++DG + ++ +Y+ ++A+D G LFW++
Sbjct: 1551 -----DGTRNHISVCSLDGEYVTRIIEEDVYQVRSMAVDPTQGK-----------LFWSE 1594
Query: 343 WGENPRIERI----GMDGSNRSTIISTKIYW----PNGLTLDIATRRVYFADSKLDFIDF 394
G + E + MDGS R TI++ Y P LT D+ +R+Y+ D + I +
Sbjct: 1595 TGRPQQQEHLIFMANMDGSER-TILAKLTYHSEDSPKSLTFDVQDKRLYWIDVESQSIQY 1653
Query: 395 CNYDGTGRQQVILI 408
N+ Q+V+ +
Sbjct: 1654 YNF---ATQKVVQL 1664
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
VYF ++ I K ++ + Y + LYW + I KA + NA++
Sbjct: 2146 VYFNGTRHKVIAEKQGMVE-GLAYDSKDDSLYWTCNSDS----TISKAVLSHKNATV--- 2197
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDW-GENPRIERIGMDGSNRSTIISTKIYWP 370
+ + L E+ + C ++WT+W NP I+R G + +II+T I P
Sbjct: 2198 ---EKVVRLTTEDKPRGIALDPCDSRVYWTNWNSRNPGIQRAYYTGFDVQSIITTDIRMP 2254
Query: 371 NGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
N L LD+ +++Y++D++LD ++ + DG R V+L + + D+
Sbjct: 2255 NALALDLVAQKLYWSDARLDKMERADLDGKNR--VVLSKVSPQHPFDI 2300
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 102/258 (39%), Gaps = 59/258 (22%)
Query: 78 GYCSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK-- 134
G CS +C N G+Y C C L D +C + L+ S + I DL+
Sbjct: 1420 GNCSHLCLLNFNGTYRCHCPHVMKLAEDGRSCI---RNERVLLFSRPNEIRGVDLDNPYY 1476
Query: 135 --------------------GKDHR-----AQDIVVSGLDLV---------------EGL 154
G++ R AQ V + LV G+
Sbjct: 1477 HIIPPISLPQVLQAVQLDFYGQERRIFWVDAQLNEVKRVGLVGSPIETVIDTAIKNPHGM 1536
Query: 155 AYDWIGGHIYW--LDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
A DW+ ++++ D N I VC +G + ++++ Q R M +DP+ G LFW++
Sbjct: 1537 AIDWLSRNLFFSSSDGTRNHISVCSLDGEYVTRIIEEDVYQVRSMAVDPTQGK--LFWSE 1594
Query: 213 WGENPRIERI----GMDGSNRSTIISTKIYW----PNGLTLDIATRRVYFADSKLDFIDC 264
G + E + MDGS R TI++ Y P LT D+ +R+Y+ D + I
Sbjct: 1595 TGRPQQQEHLIFMANMDGSER-TILAKLTYHSEDSPKSLTFDVQDKRLYWIDVESQSIQY 1653
Query: 265 KSLEIKTNVNYSTIFRKL 282
+ + V S+ L
Sbjct: 1654 YNFATQKVVQLSSNLTTL 1671
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q I+ + + + LA D + +YW D+RL+++E D +G NR+VL+K + P D
Sbjct: 2244 QSIITTDIRMPNALALDLVAQKLYWSDARLDKMERADLDGKNRVVLSKVSPQHP----FD 2299
Query: 201 PSPGTRWLFWTDW 213
+ ++FWTDW
Sbjct: 2300 IAVYGNYIFWTDW 2312
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLAKDNITQPRGMMLD 200
+V L GL D+ G +YW D L RIE + +GTNR I A +N+ +P G+ L
Sbjct: 596 LVRQNLHWPNGLTIDYAGKKMYWCDVHLGRIERINLDGTNRELIASASENLHRPYGLALS 655
Query: 201 PSPGTRWLFWTDWGENPRIERIGMD 225
S +L+WT+ + +I+R+ ++
Sbjct: 656 DS----FLYWTE-KDAGKIQRLSLN 675
>gi|410899448|ref|XP_003963209.1| PREDICTED: low-density lipoprotein receptor-related protein 1-like
[Takifugu rubripes]
Length = 4556
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 127/404 (31%), Positives = 192/404 (47%), Gaps = 92/404 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+N T +CD DC +G+DE C + EC K CS C +G C C PG L
Sbjct: 2923 CLNETLLCDRNDDCGDGSDE-LNCFINECLNSKLSGCSQLCDDLKIGYKCRCHPGFQLKR 2981
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D TC D++EC CSQ C NT GS+ C C +G+ L ++ T CK+ + +LI +N
Sbjct: 2982 DGRTCVDIDECTTTYPCSQRCINTHGSFHCLCVDGFELSPNDPTICKSTSEEEPYLIFAN 3041
Query: 123 RHSILVADLE-------EKGKD-------HRAQDIVV----------------------- 145
R+ + +L+ ++G + H A+ ++
Sbjct: 3042 RYYLRKLNLDGSNYTLIKQGLNNAVALDFHYAEQMIYWTDVTTQGSMIRRMRMNGSSMEV 3101
Query: 146 ---SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ L +GLA DW+GG++YW D + IEV NG R VL + +PR + +D
Sbjct: 3102 LHRTSLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVNSGLREPRALAVDVR 3161
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W+DWG++P I RIGMDG+NRS I+ KI WPNGLTLD R+Y+AD++ D+I
Sbjct: 3162 YG--YLYWSDWGDSPHIGRIGMDGTNRSVIVEEKITWPNGLTLDFINDRIYWADAREDYI 3219
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+ A++DG+N +++ + A+ L
Sbjct: 3220 E----------------------------------FASLDGTNRHTVLNHDIPHIFAMTL 3245
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIST 365
+++WTDW E I R G+N++T+IST
Sbjct: 3246 FE-----------EYIYWTDW-ETKSINRAHKTQGTNKTTLIST 3277
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/329 (35%), Positives = 164/329 (49%), Gaps = 57/329 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ ++K+CDG DC +G DEGP C C C T G C C G ++ D
Sbjct: 104 CIPMSKLCDGVPDCTDGWDEGPHCREQAPACTAQKCQFNCSVTHDGPRCYCLAGYEVAAD 163
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLIIS 121
TC+D NEC G CSQ CTNT+GSY CSC EGY+L+ DN +CKA N L+I+
Sbjct: 164 GRTCKDFNECNVYGTCSQTCTNTEGSYTCSCVEGYLLQPDNRSCKAKNEPVDRLPMLLIA 223
Query: 122 NRHSILVADL---------------------------------EEKGKDH---------- 138
N H I L E H
Sbjct: 224 NLHDIRCTTLSGSLSRLHAITTKQTMAMDFIYADETVCWIDVGETPAATHLKCASIPDLK 283
Query: 139 -----RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
R +I +S L VE +A DW+ + Y++D +R+ VC+++G + L ++
Sbjct: 284 SVTNIRTINITLS-LHHVEQMAIDWLTKNFYFVDDVDDRVFVCNKDGQTCVTLLDQDLYN 342
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
P+G+ LDP+ G +F+TD+G PR+ER MDG NR+ ++ TKI +P+G+TLD+ R VY
Sbjct: 343 PKGIALDPAMGK--VFFTDYGSTPRVERCDMDGQNRTKLVDTKIVFPHGITLDLVNRLVY 400
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
+AD+ LD+I+ E K N TI + L
Sbjct: 401 WADAYLDYIEVVDYEGK---NRHTIIQGL 426
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 151/304 (49%), Gaps = 51/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DCP+G+DE CDL C G CS+ C P G +C+CP G L
Sbjct: 1172 CLPAEKLCDGTDDCPDGSDEKL-CDL--CALDNGGCSHNCTIIPGEGFMCSCPLGMELGA 1228
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+ LE D +CK+ + F+I SNR
Sbjct: 1229 DNKTCQIQSFCAKHLKCSQKCEQEKSSVKCSCYEGWELESDMESCKSTDPFKPFIIFSNR 1288
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1289 HEIRRIDLHKGEFNVLVPGLRNTIALDFHLSESTLYWTDVVEDKIYRGKLSDNGALTSFE 1348
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L + PR + LDP
Sbjct: 1349 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMRTTLLAGEVEHPRAIALDP 1408
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G R TI + WPNGLT+D RR+ + D++
Sbjct: 1409 RDGI--LFWTDWDASLPRIEAASMSGEGRRTIHRETGSGGWPNGLTVDYMERRIVWIDAR 1466
Query: 259 LDFI 262
D I
Sbjct: 1467 SDAI 1470
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 194/443 (43%), Gaps = 99/443 (22%)
Query: 4 RCVNLTK-VCDGKTDCPNGADEGPG---CDLAE--CKHKFGLCSNTCHPTPLGALCTCPP 57
RC+N K CDG+ DC + +DE P C +E C +C N C
Sbjct: 2876 RCLNQKKWECDGEFDCHDHSDEAPKNPRCTDSERACNDSAFMCRNG----------NCLN 2925
Query: 58 GEILSNDSVTCQD--------MNEC--EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT 107
+L + + C D +NEC + CSQ+C + K Y C C+ G+ L+ D T
Sbjct: 2926 ETLLCDRNDDCGDGSDELNCFINECLNSKLSGCSQLCDDLKIGYKCRCHPGFQLKRDGRT 2985
Query: 108 CKAINHSAAFLIISNR--------HSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWI 159
C I+ S R H + V E D I S + L +
Sbjct: 2986 CVDIDECTTTYPCSQRCINTHGSFHCLCVDGFELSPND---PTICKSTSEEEPYLIF--- 3039
Query: 160 GGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD-WGENPR 218
+ Y+L +LN +G+N L K + + LD + ++WTD +
Sbjct: 3040 -ANRYYL-RKLNL------DGSN-YTLIKQGLNN--AVALDFHYAEQMIYWTDVTTQGSM 3088
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
I R+ M+GS+ + T + P+GL +D +
Sbjct: 3089 IRRMRMNGSSMEVLHRTSLSNPDGLAVDW------------------------------V 3118
Query: 279 FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTR 336
LYW D+G + + + + ++G+ ++LV+ L E ALA+D+ G LY
Sbjct: 3119 GGNLYWCDKGRDTIEV----SKLNGAYRTVLVNSGLREPRALAVDVRYGYLY-------- 3166
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
W+DWG++P I RIGMDG+NRS I+ KI WPNGLTLD R+Y+AD++ D+I+F +
Sbjct: 3167 ---WSDWGDSPHIGRIGMDGTNRSVIVEEKITWPNGLTLDFINDRIYWADAREDYIEFAS 3223
Query: 397 YDGTGRQQVILIDLMVEFTNDLM 419
DGT R V+ D+ F L
Sbjct: 3224 LDGTNRHTVLNHDIPHIFAMTLF 3246
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 184/435 (42%), Gaps = 94/435 (21%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSN----TCHPTPLGALCT 54
+RC++ T C+ DC + + GC L +C+ C + C + C+
Sbjct: 3755 NRCISSTLRCNFFNDCEDFGSDEIGCKTDTKLTDCRSNRTQCGDGDEAHCVTNGTDSFCS 3814
Query: 55 CPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHS 114
C G TC D NEC Q G CS +C NTKGSY CSC++ + D TCKA N
Sbjct: 3815 CKAG-FQKIGHRTCGDKNECLQFGVCSHICNNTKGSYKCSCHKYFTRISD--TCKADN-- 3869
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
I S+R + +AD E + LD G+ DW + D+ + RI+
Sbjct: 3870 ----INSSRQILYIADDNE-----------IRSLD--PGMP-DWRYEQTFQGDASV-RID 3910
Query: 175 VCDEN-GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
D + TNRI FWT+W RI + G + S
Sbjct: 3911 AMDVHVKTNRI------------------------FWTNW-HTGRISTYELQGPSLSATS 3945
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
S + R ++ ++ + K L++ + + LYW D G + +
Sbjct: 3946 SN------------SHRNRRQSEGRVIDLQIKELKMPRGIAVDWVAGNLYWTDSGRDVIE 3993
Query: 294 LKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
+ A M G + L+SG + E A+ +D + G +Y W DWG +P+IE
Sbjct: 3994 V----AQMSGQHCKTLISGMIDEPYAIVVDPQRGTMY-----------WADWGNHPKIET 4038
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI--- 408
MDG+ R T++ I WP GL +D R+Y+AD+KL I DG+ VI +
Sbjct: 4039 AAMDGTLRQTLVHENIQWPTGLAVDYYNERLYWADAKLSVIGSVRLDGS--DPVIAVSGI 4096
Query: 409 --DLMVEFTNDLMGD 421
+L+ F+ D+ D
Sbjct: 4097 KNNLLHPFSIDIFED 4111
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 134/305 (43%), Gaps = 65/305 (21%)
Query: 78 GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T S C C GY L+ +C+ + +FL+ S I L+ K
Sbjct: 1861 GDCSQLCLPTSPTSRACMCTAGYSLKSGQQSCEGM---GSFLLFSVHEGIRGIPLDPADK 1917
Query: 137 ----------------DHRA-------------------------QDIVVSGLDLVEGLA 155
D A +D+V +G+ VEG+
Sbjct: 1918 SDALVPVSGTSLAVGIDFHADNDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIT 1977
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + PS G +LFWT+WG+
Sbjct: 1978 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPSKG--YLFWTEWGQ 2035
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DGS R +++ I WPNG+++D +Y+ D++ D I+ +LE N
Sbjct: 2036 YPRIERSRLDGSQRFVLVNVSISWPNGISIDYEEGLLYWCDARTDKIERINLETGENREL 2095
Query: 273 ---------VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
S +YW D +K G + NA+ V QL + + L+
Sbjct: 2096 VLANNNMDMFAVSVFEEHIYWSDRTHANGSIKRGSKD----NATDAV--QLRTGIGVQLK 2149
Query: 324 NGMLY 328
+ ++
Sbjct: 2150 DIKVF 2154
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 109/242 (45%), Gaps = 56/242 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA-DLE 132
+ G CS +C +N+ + C C G+ L D +CK +H + R I+ D+
Sbjct: 503 KAGGCSDICLLSNSHKTRTCRCRSGFSLGSDGKSCKKPDHELFLVYGKGRPGIIRGMDMN 562
Query: 133 EKGKDH-----------RAQD------------------------------IVVSGLDLV 151
K D RA D I+ G+ V
Sbjct: 563 AKVPDEYMIPIENLMNPRALDFHAASEFIYFADATSYIIGRQKIDGTERDTILKEGIHTV 622
Query: 152 EGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
EG+A DW+GG++YW D + + ++ R L + ++ PR +++DP G W+
Sbjct: 623 EGIAVDWMGGNLYWTDDGPKKTISVARLEKASQTRKTLIEGKMSHPRAIVVDPQHG--WM 680
Query: 209 FWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLDF 261
+WTDW E+P +I++ MDGS+ +++K + WPNGL+LDI +Y+ D+ D
Sbjct: 681 YWTDWEEDPTESNRGKIKKAWMDGSHHQIFLTSKTVLWPNGLSLDIPQGILYWVDAYYDR 740
Query: 262 ID 263
I+
Sbjct: 741 IE 742
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 9/107 (8%)
Query: 300 NMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNR 359
N DG L+ LY + L+ M +F+TD+G PR+ER MDG NR
Sbjct: 326 NKDGQTCVTLLDQDLYNPKGIALDPAMGK---------VFFTDYGSTPRVERCDMDGQNR 376
Query: 360 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ ++ TKI +P+G+TLD+ R VY+AD+ LD+I+ +Y+G R +I
Sbjct: 377 TKLVDTKIVFPHGITLDLVNRLVYWADAYLDYIEVVDYEGKNRHTII 423
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 130/330 (39%), Gaps = 58/330 (17%)
Query: 80 CSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH 138
CS +C N ++ C+C L+ D TC+ S FL+ + + I D++ ++
Sbjct: 1557 CSHLCLINFNQTFSCACPHLMKLQPDKRTCE---ESRKFLLYARQIEIRGVDIDNPYYNY 1613
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
V +D V + YD + IYW D R I+ NGT + ++ G+
Sbjct: 1614 IIS-FTVPDIDNVTAVDYDAVEHRIYWSDVRTQTIKRAFINGTGVETVVSADLPNAHGLA 1672
Query: 199 LDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+D +R LFWT + N + I +DGS ++ +I + P+GL L
Sbjct: 1673 VDWV--SRNLFWTSYDANKKQINVARLDGSFKNAVIQ-GLDKPHGLVL------------ 1717
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE- 316
I KLYW D G N I ANMDGSN + L + Q
Sbjct: 1718 ------------------HPILGKLYWTD-GDN-----ISMANMDGSNHTTLFTSQKGPV 1753
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 376
L++D E LY W G N I R +DG + K L
Sbjct: 1754 GLSIDYEREQLY-----------WISSG-NGAINRCQLDGMKLEILEGVKGKLSKATALA 1801
Query: 377 IATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I ++++AD D I C+ G +V+
Sbjct: 1802 IMGDKLWWADQGSDQIGTCDKKDGGNWKVM 1831
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
+ S+ H + + + G D + IVV + VEGLAY +YW + I
Sbjct: 2260 IFFSDIHFGNIQQINDDGTDRK---IVVDNVGSVEGLAYHRGWDTLYWTSYTTSTITRHT 2316
Query: 178 ENGTNRIVLAKDNIT------QPRGMMLDPSPGTRWLFWTDWGEN-PRIERIGMDGSNRS 230
+ + I +D + PR +LD +FWT+W E P I R ++G+N
Sbjct: 2317 VDQSRTIAYNRDTVVSMSTEDHPRAFVLDEC--QDLMFWTNWNEQAPSIMRASLNGANVL 2374
Query: 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
II + I PNGL +D ++YF+D+ LD I+
Sbjct: 2375 VIIGSDIKTPNGLAIDHRAEKLYFSDATLDKIE 2407
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTL 375
+++ E+ + +C +FWT+W E P I R ++G+N II + I PNGL +
Sbjct: 2330 VVSMSTEDHPRAFVLDECQDLMFWTNWNEQAPSIMRASLNGANVLVIIGSDIKTPNGLAI 2389
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
D ++YF+D+ LD I+ C YDG+ R ++ + + F + GD
Sbjct: 2390 DHRAEKLYFSDATLDKIERCEYDGSSRYVLLKNEPVHPFGLAVYGD 2435
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
+ +IYW + T I +R + + ++ + L + + R L+W N
Sbjct: 1633 VEHRIYWSDVRTQTI--KRAFINGTGVETVVSADLPNAHGLAVDWVSRNLFWTSYDANKK 1690
Query: 293 PLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+ + A +DGS + ++ G LD +G++ + L L+WTD G+N I
Sbjct: 1691 QINV--ARLDGSFKNAVIQG-------LDKPHGLVLHPILG---KLYWTD-GDN--ISMA 1735
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
MDGSN +T+ +++ P GL++D ++Y+ S I+ C DG + +
Sbjct: 1736 NMDGSNHTTLFTSQ-KGPVGLSIDYEREQLYWISSGNGAINRCQLDG----------MKL 1784
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKT 448
E + G A AL + L+++ +G++ + T
Sbjct: 1785 EILEGVKGKLS-KATALAIMGDKLWWADQGSDQIGT 1819
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGM 354
+ K N+DGSN +++ G L A+ALD +Y+ + ++WTD + I R+ M
Sbjct: 3045 LRKLNLDGSNYTLIKQG-LNNAVALDF-----HYAE----QMIYWTDVTTQGSMIRRMRM 3094
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
+GS+ + T + P+GL +D +Y+ D D I+ +G R +L++
Sbjct: 3095 NGSSMEVLHRTSLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYR--TVLVN----- 3147
Query: 415 TNDLMGDNGVPALALDLENGMLYYSTEG 442
G ALA+D+ G LY+S G
Sbjct: 3148 ----SGLREPRALAVDVRYGYLYWSDWG 3171
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 127/350 (36%), Gaps = 91/350 (26%)
Query: 121 SNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG 180
+N+ I VA L D ++ V+ GLD GL I G +YW D + I + + +G
Sbjct: 1687 ANKKQINVARL-----DGSFKNAVIQGLDKPHGLVLHPILGKLYWTDG--DNISMANMDG 1739
Query: 181 TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG-------------- 226
+N L P G+ +D L+W G N I R +DG
Sbjct: 1740 SNHTTLFTSQ-KGPVGLSIDYE--REQLYWISSG-NGAINRCQLDGMKLEILEGVKGKLS 1795
Query: 227 -SNRSTIISTKIYWPNGLTLDIAT---------------------RRVYFADSKLDFI-- 262
+ I+ K++W + + I T R+Y ++ I
Sbjct: 1796 KATALAIMGDKLWWADQGSDQIGTCDKKDGGNWKVMRNNTSPMMHMRIYDESAQKSGINL 1855
Query: 263 ------DCKSLEIKTN---------VNYSTIFRK----------LYWIDEGGNGVPLKIG 297
DC L + T+ YS + L+ + EG G+PL
Sbjct: 1856 CSNNNGDCSQLCLPTSPTSRACMCTAGYSLKSGQQSCEGMGSFLLFSVHEGIRGIPLDPA 1915
Query: 298 KANMDGSNASILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG 356
D S+A + VSG L + +N +Y W D G + I R D
Sbjct: 1916 ----DKSDALVPVSGTSLAVGIDFHADNDTIY-----------WVDMGLS-TISRAKRDQ 1959
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ R +++ I G+T+D +Y+ D D I+ +G+ R VI
Sbjct: 1960 TWREDVVTNGIGRVEGITVDWIAGNIYWTDQGFDVIEVARLNGSFRYVVI 2009
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ S + GLA D +Y+ D+ L++IE C+ +G++R VL K+ P G+ +
Sbjct: 2376 IIGSDIKTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSSRYVLLKNEPVHPFGLAV--- 2432
Query: 203 PGTRWLFWTDW 213
++FWTDW
Sbjct: 2433 -YGDYIFWTDW 2442
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 28/150 (18%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ ++LV G L +ALD L STL +WTD E+ +I R +
Sbjct: 1290 EIRRIDLHKGEFNVLVPG-LRNTIALDFH---LSESTL------YWTDVVED-KIYRGKL 1338
Query: 355 DGSNRST----IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ T +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1339 SDNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMR-------- 1390
Query: 411 MVEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L G+ P A+ALD +G+L+++
Sbjct: 1391 ----TTLLAGEVEHPRAIALDPRDGILFWT 1416
>gi|348585761|ref|XP_003478639.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 1B-like [Cavia porcellus]
Length = 4559
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 157/513 (30%), Positives = 225/513 (43%), Gaps = 88/513 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+GK DCP+G+DEG CD EC G CSN C P G +C+CP G L+
Sbjct: 1145 CLQPEKLCNGKRDCPDGSDEGDLCD--ECSLNNGGCSNQCSVVPGRGIVCSCPKGLQLNK 1202
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC EG+ L+ D +C +++ AF+I S R
Sbjct: 1203 DNKTCEIVDYCSSHLKCSQVCEQHKHTVKCSCYEGWKLDADGESCTSVDPFEAFIIFSIR 1262
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1263 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAIE 1322
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 1323 IVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDP 1382
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 1383 RFGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAR 1440
Query: 259 LDFI------DCKSLEIKTNVNY-------STIFRKLYWIDEGGNGVPLKIGKANM-DGS 304
D I +EI Y S ++YW D N + KAN +G
Sbjct: 1441 SDAIYSALYDGTNMIEIIRGHEYLSHPFAVSLYGSEVYWTDWRTN----TLSKANKWNGQ 1496
Query: 305 NASIL--VSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
N S++ S Q ++ +L ++ K T + R E G+D N
Sbjct: 1497 NVSVIQKTSAQPFDLQIYHPSRQILXLASEKKTGEVREQFILYARRSEIRGVDIDNPYFN 1556
Query: 363 ISTKIYWPN-----GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
T P+ + D + R+Y+ D K I +GTG + VI D+
Sbjct: 1557 FITAFTVPDIDDVTVIDFDASEERLYWTDIKTQTIKRAFINGTGLETVISRDIQ------ 1610
Query: 418 LMGDNGVPALALDLENGMLYYSTEGAEFLKTPL 450
+ LA+D + LY+ + +EF +T +
Sbjct: 1611 -----SIRGLAVDWVSRNLYWIS--SEFDETQI 1636
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 142/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +CD K DC +G+DE C + EC K CS C P+ C C PG +
Sbjct: 2863 RCIPSGNLCDSKDDCGDGSDE-RNCHINECLSKKTSGCSQDCQDLPVSYKCKCWPGFQMK 2921
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C +GY ++ DN + CK+++ FLI++
Sbjct: 2922 DDGKTCVDIDECSSGFPCSQHCINTYGTYKCLCTDGYKIQPDNPNGCKSLSDEEPFLILA 2981
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
+ H I L ++G D+R + I
Sbjct: 2982 DHHEIRKISTDGSNYTLLKQGLNNVIAIDFDYREEFIYWIDSSRPNGSRINRMYLNGSDI 3041
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D IEV NG +L + PR + LDP
Sbjct: 3042 KVVHNTAVPNALAVDWIGKNLYWSDMEKRIIEVSKVNGLYPTILVSKRLKFPRDLSLDPR 3101
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +L+W D E P I R+GMDG+N+S +I TKI P LT+D R+Y+AD
Sbjct: 3102 AG--YLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLYWAD 3153
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 149/315 (47%), Gaps = 65/315 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-------PGCDLAECKHKFGLCSNTCHPTPLGALCTCP 56
+CV+L+++C+G DC +G DEG P C C++K + N+ C C
Sbjct: 84 KCVHLSQLCNGVFDCSDGYDEGAHCRELIPNCQQMNCQYKCAIVRNS-------TRCYCE 136
Query: 57 PGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI---NH 113
G + D C+D +EC G CSQ C NT GSY+C C EGYV++ +N TCKA
Sbjct: 137 DGFEVKEDGRGCKDQDECAVYGTCSQTCVNTHGSYVCGCVEGYVMQPNNRTCKAKIEPTD 196
Query: 114 SAAFLIISNRHSILVADL--EEKGKDHRAQDIVVSGLDL--------------------- 150
S L+ +N +I + L + + A + GLD
Sbjct: 197 SPPMLLTANSETIEIFYLNGSKMATLNSANRNEIHGLDFIYKEETICWVESRDTSNQLKC 256
Query: 151 -----------------------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
VE +A DW+ ++Y++D +RI VC+ NG+ + L
Sbjct: 257 IQITKTGRLTDEWTINILQSFHNVEQMAIDWLTRNLYFVDHVSDRIFVCNFNGSVCVTLI 316
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
++ P+ + +DP G LF+TD+G ++ER MDG+NR+ I+ +K P+ L +D+
Sbjct: 317 DLDLHNPKAIAVDPIAGK--LFFTDYGNVAKVERCDMDGTNRTRIVDSKAEQPSALAVDL 374
Query: 248 ATRRVYFADSKLDFI 262
+ VY+ D LD++
Sbjct: 375 INKLVYWVDLYLDYV 389
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 128/287 (44%), Gaps = 60/287 (20%)
Query: 69 QDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
Q N C G CSQ+C T + + C C GY L+ + +C+ I +FL+ S I
Sbjct: 1794 QGSNSCHLNNGGCSQLCLPTSENTRTCMCTVGYYLQKNRMSCQGIE---SFLMYSVHEGI 1850
Query: 127 LVADLEEKGK----------------DHRAQ-------------------------DIVV 145
LE K D A+ DI+
Sbjct: 1851 RGIPLEPSDKMDALMPISGTSFAVGIDFHAENDTIYWTDMGFNKISRAKRDQTWKEDIIT 1910
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + + P G
Sbjct: 1911 NGLGRVEGIAIDWIAGNIYWTDHGFNLIEVARLNGSFRYVVMSQGLDQPRSIAVHPEKG- 1969
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+LFWT+WG+ PRI + +DGS + ++ST I WPNG+++D ++Y+ D++ D I+
Sbjct: 1970 -FLFWTEWGQMPRIGKSRLDGSEKLVLVSTGIAWPNGISIDYEENKLYWCDARTDKIERI 2028
Query: 266 SLEIKTN------------VNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
LE +N + + +YW D ++ G N
Sbjct: 2029 DLETGSNREMVLSGSNVDMFSVAVFGAYIYWSDRAHANGSIRRGHKN 2075
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 134/328 (40%), Gaps = 74/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSNT--CHPTPLGALCTCPP 57
+C+ + CD DC +G+DE C C+ C + C+ C C P
Sbjct: 3733 KCIPMDLQCDRLDDCGDGSDE-QSCRTTPTEYTCEDNVNPCGDDAYCNQIKTSVFCRCKP 3791
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G + + C+D+NEC G CSQ C N +GSY C C++ + ++ N+TC A
Sbjct: 3792 GFQRNMKNRQCEDLNECLVFGMCSQQCINIEGSYKCVCDQNFQVQ--NNTCIAKGSEDQV 3849
Query: 118 LIISNRHSIL--VADLEEKGK----DHRAQDIVVSGLD---------------------- 149
L I+N IL + G H + ++G+D
Sbjct: 3850 LYIANDTDILGFIYPFNYSGNHQQISHIEHNSRITGMDVYFQRDMIIWSTQFNPGGIFYK 3909
Query: 150 LVEG--------------------LAYDWIGGHIYWLD-SRLN--------------RIE 174
++ G +A DW+ G+IYW D SR++ +
Sbjct: 3910 MIHGREKREANSGLICPEFKRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTPWANLRYSVN 3969
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V NG+N L + +P + + P G ++WT G++ IE MDG+ R ++
Sbjct: 3970 VGQLNGSNCTRLLTNMAGEPYAIAVHPKRGM--MYWTVIGDHSHIEEAAMDGTLRRILVQ 4027
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D T R+Y+AD +L I
Sbjct: 4028 KNLQRPTGLAVDHLTERIYWADVELSII 4055
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 104/241 (43%), Gaps = 57/241 (23%)
Query: 77 PGYCSQMCTNTKGSY---ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA-DLE 132
PG CS +C GSY C C G+ L D +CK + R I+ DL
Sbjct: 478 PGGCSHICL-LSGSYKMRTCRCRTGFNLGSDGRSCKRPKNELFLFYGKGRPGIVRGMDLN 536
Query: 133 EKGKDH-----------RAQD------------------------------IVVSGLDLV 151
K D RA D I LD V
Sbjct: 537 TKIADEYMIPIENLVNPRAVDFHAETSYIYFADTTSFLIGRQKIDGTERETISERDLDNV 596
Query: 152 EGLAYDWIGGHIYWL-DSRLNRIEVC--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
EG+A DWIG ++YW D I V ++ +R L + ++ PRG+++DP G W+
Sbjct: 597 EGIAVDWIGNNLYWTNDGHRKTINVARLEKASQSRKTLLEGEMSHPRGIVVDPVNG--WM 654
Query: 209 FWTDWGENP------RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+WTDW E+ RIE+ MDG NR +++K+ WPNGLTLD +Y+ D+ D I
Sbjct: 655 YWTDWEEDEIDASVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHASTLYWCDAYYDHI 714
Query: 263 D 263
+
Sbjct: 715 E 715
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G N ++ST I PNGLT+D ++YF+D L
Sbjct: 2288 ECQNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDHRAEKLYFSDGSLGK 2347
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 2348 IERCEYDGSQRHVIV 2362
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 156/424 (36%), Gaps = 78/424 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLA----ECKHKFGLCSNT-CHPTPLGA--LCTCPP 57
C+ K C+G DC + +DE + CK CSN C P L L C
Sbjct: 3690 CLQSEKTCNGVDDCGDNSDEEHCGKVTYKAKPCKKDEFTCSNKKCIPMDLQCDRLDDCGD 3749
Query: 58 GE-----ILSNDSVTCQD-MNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI 111
G + TC+D +N C YC+Q+ K S C C G+ N C+ +
Sbjct: 3750 GSDEQSCRTTPTEYTCEDNVNPCGDDAYCNQI----KTSVFCRCKPGFQRNMKNRQCEDL 3805
Query: 112 NHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN 171
N F + S Q I + G +Y + + + +
Sbjct: 3806 NECLVFGMCSQ------------------QCINIEG-------SYKCVCDQNFQVQN--- 3837
Query: 172 RIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS-NRS 230
C G+ VL N T G + + + N RI GMD R
Sbjct: 3838 --NTCIAKGSEDQVLYIANDTDILGFIYPFNYSGNHQQISHIEHNSRI--TGMDVYFQRD 3893
Query: 231 TIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
II + + P G+ I R A+S L C + ++ + +YW D
Sbjct: 3894 MIIWSTQFNPGGIFYKMIHGREKREANSGLI---CPEFKRPRDIAVDWVAGNIYWTDHSR 3950
Query: 290 -----------NGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTR 336
+ + ++GSN + L++ E A+A+ + GM+Y
Sbjct: 3951 MHWFSYYTTPWANLRYSVNVGQLNGSNCTRLLTNMAGEPYAIAVHPKRGMMY-------- 4002
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
WT G++ IE MDG+ R ++ + P GL +D T R+Y+AD +L I
Sbjct: 4003 ---WTVIGDHSHIEEAAMDGTLRRILVQKNLQRPTGLAVDHLTERIYWADVELSIIGSVL 4059
Query: 397 YDGT 400
YDG+
Sbjct: 4060 YDGS 4063
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 96/224 (42%), Gaps = 33/224 (14%)
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++D L+WTD + I+R ++G+ T+IS I GL +D +R +Y+ S
Sbjct: 1571 VIDFDASEERLYWTDI-KTQTIKRAFINGTGLETVISRDIQSIRGLAVDWVSRNLYWISS 1629
Query: 258 KLDFIDCKSLEIKTNVNYSTIFR--------------KLYWIDEGGNGVPLKIGKANMDG 303
+ D + ++ S I KLYW D GN + + ANMDG
Sbjct: 1630 EFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD--GNTINM----ANMDG 1683
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
SN+ IL Q E + L ++ Y K L+W G N I R +DG N I
Sbjct: 1684 SNSKILFQNQ-KEPVGLSID-----YVENK----LYWISSG-NGTINRCNLDGGNLEVIE 1732
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
S K L I +++++AD L + C+ GR IL
Sbjct: 1733 SMKEELTKATALTIMDKKLWWADQNLAQLGTCS-KRDGRNPTIL 1775
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 94/242 (38%), Gaps = 58/242 (23%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-----NRIEVCDENGTNR---IVLAKDNIT 192
+ ++V + VEGLAY +YW S + ++ +R I +++D+
Sbjct: 2222 RQVIVENVGSVEGLAYHRAWDTLYWTSSTTSSITRHTVDQTRPGAFDREAVITMSEDD-- 2279
Query: 193 QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
P + LD +FWT+W E +P I R + G N ++ST I PNGLT+D +
Sbjct: 2280 HPHVLALDEC--QNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDHRAEK 2337
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+YF+D L KI + DGS ++V
Sbjct: 2338 LYFSDGSLG----------------------------------KIERCEYDGSQRHVIVK 2363
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
L+L + + ++FW+DWG + G + + S + P
Sbjct: 2364 SGPGTFLSLAVYDN-----------YIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPI 2412
Query: 372 GL 373
G+
Sbjct: 2413 GI 2414
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 123/270 (45%), Gaps = 35/270 (12%)
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
F++ + R I D++ + V +D V + +D +YW D + I+
Sbjct: 1536 FILYARRSEIRGVDIDNPYFNFITA-FTVPDIDDVTVIDFDASEERLYWTDIKTQTIKRA 1594
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIIS- 234
NGT + +I RG+ +D +R L+W + + +I +DGS +++II
Sbjct: 1595 FINGTGLETVISRDIQSIRGLAVDWV--SRNLYWISSEFDETQINVARLDGSLKTSIIHG 1652
Query: 235 -------------TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRK 281
K+YW +G T+++A + ++SK+ F + K + +++Y + K
Sbjct: 1653 IDKPQCLAAHPVRGKLYWTDGNTINMAN--MDGSNSKILFQNQKE-PVGLSIDY--VENK 1707
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVS--GQLYEALALDLENGMLYYSTLKCTRWLF 339
LYWI GNG I + N+DG N ++ S +L +A AL + + L+++ +
Sbjct: 1708 LYWI-SSGNGT---INRCNLDGGNLEVIESMKEELTKATALTIMDKKLWWADQNLAQLGT 1763
Query: 340 WTDW-GENPRIERIGMDGSNRSTIISTKIY 368
+ G NP I R + S ++ K+Y
Sbjct: 1764 CSKRDGRNPTILR-----NKTSGVVHMKVY 1788
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ +V + + GL D +Y+ D L +IE C+ +G+ R V+ K G L
Sbjct: 2315 AQVVVSTDILTPNGLTIDHRAEKLYFSDGSLGKIERCEYDGSQRHVIVKSG----PGTFL 2370
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ ++FW+DWG + G + + S + P G+
Sbjct: 2371 SLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPIGI 2414
>gi|345800482|ref|XP_546704.3| PREDICTED: low-density lipoprotein receptor-related protein 8
isoform 3 [Canis lupus familiaris]
Length = 960
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 153/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 308 CVPTLKRCNQEQDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGYQLL 366
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG + C C+ GY ++ CKA+ + LI +N
Sbjct: 367 -DQKTCGDIDECEDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAVAGKSPSLIFTN 425
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D Q
Sbjct: 426 RHEVRRIDLVKRDYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPAEQ 485
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+++V L EGLA DW+ HIYW DS I V +G R L ++++PR + +D
Sbjct: 486 EVLVDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATMDGARRCTLFSRDLSEPRAIAVD 545
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG +IE+ G++G +R T++S I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 546 PLRG--FMYWSDWGYQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLNQRLYWVDSKL 602
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 174/417 (41%), Gaps = 79/417 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTCHPT--PLGALCTCPPGEI 60
CV+L CDG DC + +DE C L C+ +F TC PT CP G
Sbjct: 268 ECVHLGWRCDGDRDCKDKSDEA-DCPLGTCRGDEFQCGDGTCVPTLKRCNQEQDCPDG-- 324
Query: 61 LSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SA 115
S+++ Q +NEC G CS +CT+ K + C+C GY L D TC I+ A
Sbjct: 325 -SDEAGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGYQL-LDQKTCGDIDECEDPDA 382
Query: 116 AFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEV 175
I N + + D + V G + I + + + RI++
Sbjct: 383 CSQICVNYKGYFKCECHPGYE----MDTLTKNCKAVAGKSPSLIFTNRH----EVRRIDL 434
Query: 176 CDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RST 231
+ + I + K+ + LD T ++W D +I MD ++ +
Sbjct: 435 VKRDYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPAEQEV 487
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
++ +++ P GL +D + + +YW D G
Sbjct: 488 LVDEQLHSPEGLAVDW------------------------------VHKHIYWTDSGNK- 516
Query: 292 VPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
I A MDG+ L S L E A+A+D G +Y W+DWG +I
Sbjct: 517 ---TISVATMDGARRCTLFSRDLSEPRAIAVDPLRGFMY-----------WSDWGYQAKI 562
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
E+ G++G +R T++S I WPNG+TLD+ +R+Y+ DSKL + + G R+ +I
Sbjct: 563 EKSGLNGVDRQTLVSDNIEWPNGITLDLLNQRLYWVDSKLHQLSSIDLSGGNRKMLI 619
>gi|291231248|ref|XP_002735580.1| PREDICTED: low density lipoprotein-related protein 2-like
[Saccoglossus kowalevskii]
Length = 2965
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 118/356 (33%), Positives = 173/356 (48%), Gaps = 67/356 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C+NL +C+ DC + +DEG C + C+ K CS CH TP G +C C G L +
Sbjct: 1228 QCINLELICNDVADCDDESDEGHLCAINLCERKG--CSELCHMTPNGPMCHCQVGHRLQS 1285
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D++TC+D+NEC E G CSQ CTN KG Y CSC +GY LE D HTCK ++ LI +
Sbjct: 1286 DNMTCEDINECSESIGLCSQQCTNLKGYYKCSCMDGYKLEPDEHTCK-VSDGDPLLIFTT 1344
Query: 123 RHSILVADLEEKG-----KDHRAQDIVVSGLDLVEG---------------------LAY 156
H I L + + + + V G D++EG LA
Sbjct: 1345 DHEIRGYFLHSEDYTSILDEMNSNENVALGFDMIEGRIYWTDVTKKSILSNLHTPVSLAI 1404
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DWI +YW DS + I VC G + L +I QP+ +++D S G +L+W+ WGE
Sbjct: 1405 DWINRMLYWTDSGYSHIAVCTLEG-QMVTLVISDIDQPQSIIVDSSTG--YLYWSSWGET 1461
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
+IE+ GMDG+ R+ ++ T I PN LTLD + +YF D+ LD
Sbjct: 1462 AKIEKSGMDGTRRNILVDTSITTPNRLTLDRTSNMLYFVDTTLD---------------- 1505
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
I K + +G N ++V+ +LY ++ + LY++ L
Sbjct: 1506 ------------------AIMKIDTEGQNFMVIVTDRLYNPFSITVFEDQLYWTDL 1543
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/339 (33%), Positives = 167/339 (49%), Gaps = 56/339 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV + VC+G DC + +DE C EC G CS+ C P C CP G L D
Sbjct: 218 CVLMEYVCNGHDDCGDQSDEN--CGHNECDDDNGGCSHICVTIPTSYRCECPLGFSLGLD 275
Query: 65 SVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI---- 119
+ TCQD NEC + G CS C NT GSY CSC +GY+LE D +CKA + +
Sbjct: 276 NHTCQDTNECIDSFGICSHECANTLGSYQCSCKQGYLLEVDGVSCKATGSESKLIFTDKS 335
Query: 120 ---ISNRHS-------------------------ILVADLEEKG-------KDHRAQDIV 144
I + HS I A+L ++ + I+
Sbjct: 336 EVRIFSLHSQLEYQTIVSGNPMLSALDFDWMTQHIYYANLTDQSIYEISLVEKTATASIL 395
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
++G+ L+EG+++DW IY+ S +I V + + VL + + +PR ++LDP
Sbjct: 396 LAGVGLIEGMSFDWTTKQIYFTKSTPGQIVVATLDKQLK-VLIQTALEEPRAIVLDPE-- 452
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
R+++W+DWG P+IE+ GMDGS+R I+S + WPNGLT+D AT R+++ D KL ++
Sbjct: 453 HRYMYWSDWGVVPKIEKAGMDGSDREVIVSQNLMWPNGLTIDYATGRLFWTDGKLKLLES 512
Query: 265 KSL---------EIKTNVNYS-TIFR-KLYWIDEGGNGV 292
L EI ++ T+F +YW D N +
Sbjct: 513 CDLAGKDRQVVKEIGLLYPFALTVFENNVYWSDSATNTI 551
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 161/378 (42%), Gaps = 67/378 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ +C+G +C + +DEG CD + C G CS+ C PTP G LC CP G L +
Sbjct: 2197 CIARNLLCNGIDECDDSSDEGHQCD-SSCVFNGG-CSHLCIPTPRGPLCGCPNGLELGEN 2254
Query: 65 SVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
+C D+NEC P CS C N KGSY CSC GY L D CKA A + +
Sbjct: 2255 DKSCDDVNECLVYPPVCSHNCDNIKGSYTCSCEAGYRLHADERGCKAQGDEARLIFAIEK 2314
Query: 124 HSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR 183
++ G H + V + +D + +YW + R+
Sbjct: 2315 E----LRMQTLGTLHNYAPLKSISDGYVCDVDFDSLTQDVYWTHLQKCRVST-------- 2362
Query: 184 IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
++ PR + + PS G LFW+DWG P+IE+ MDGSNR II TK+ +PNG+
Sbjct: 2363 ----THSLGDPRAIAVCPSVG--LLFWSDWGIEPKIEKAWMDGSNREVIIKTKLLYPNGI 2416
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
T+D +R+Y+ D+ L+ I+ AN DG
Sbjct: 2417 TIDYVHQRLYWVDAGLNVIE----------------------------------YANFDG 2442
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+ L + +L L LY WTDW + IE I +I
Sbjct: 2443 TERRSLDELTVPHPFSLTLFEDRLY-----------WTDWTKG-SIESINKFTGQDLKVI 2490
Query: 364 STKIYWPNGLTLDIATRR 381
+ ++ P G+ + + R+
Sbjct: 2491 VSGLHHPMGVVVAHSVRQ 2508
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 116/219 (52%), Gaps = 21/219 (9%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C + C+C + + L D TC H + RH+ LV +
Sbjct: 1673 GGCSYLCLPNPLGFSCACPDDWHLTTDEKTCTV--HCFGCWV---RHTALVIGCGTQ--- 1724
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+ I GLD VE +A D + ++YW DS +IEV +GT R L D+I +PRG+
Sbjct: 1725 -PCEVIFKEGLDTVEDIAIDTVNDNLYWTDSSAVKIEVARLDGTARKTLISDDINEPRGI 1783
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++ PS G LF++DWG + +IE+ MDG+ R +++T + WPNGL LD+ R+Y+ D+
Sbjct: 1784 VVYPSKG--LLFFSDWGSHAKIEKTTMDGAIREKLVTTHLIWPNGLCLDLTEDRLYWTDA 1841
Query: 258 KLDFIDCKSLE------IKTNVNY----STIFRKLYWID 286
+ I+ L+ I TN+ + + + K+YW+D
Sbjct: 1842 HTNTIETVRLDGGDRKVIVTNIPHPFSVAILENKVYWVD 1880
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 175/441 (39%), Gaps = 105/441 (23%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADE-----------GPGCDLAECKHKFGLCSNTCHPTPLG 50
+RC+ + +CD DC NG DE GCD EC + G C N
Sbjct: 1182 TERCIPESWLCDRIIDCSNGIDELDCIHSKTHVKSEGCDSFECDN--GQCINL------- 1232
Query: 51 ALCTCPPGEILSNDSVTCQD---------MNECEQPGYCSQMCTNTKGSYICSCNEGYVL 101
E++ ND C D +N CE+ G CS++C T +C C G+ L
Sbjct: 1233 --------ELICNDVADCDDESDEGHLCAINLCERKG-CSELCHMTPNGPMCHCQVGHRL 1283
Query: 102 EYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGG 161
+ DN TC+ IN + + + ++ + KG Y
Sbjct: 1284 QSDNMTCEDINECSESIGLCSQQCTNL-----KG-------------------YYKCSCM 1319
Query: 162 HIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIER 221
Y L+ + +V D G ++ D+ + RG L T L + EN +
Sbjct: 1320 DGYKLEPDEHTCKVSD--GDPLLIFTTDH--EIRGYFLHSEDYTSILDEMNSNENVAL-- 1373
Query: 222 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRK 281
G D +I +IYW D+ + + +L ++ I R
Sbjct: 1374 -GFD------MIEGRIYW-----TDVTKKSIL-----------SNLHTPVSLAIDWINRM 1410
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
LYW D G + I ++G ++++S +D ++ S+ T +L+W+
Sbjct: 1411 LYWTDSGYS----HIAVCTLEGQMVTLVISD-------IDQPQSIIVDSS---TGYLYWS 1456
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
WGE +IE+ GMDG+ R+ ++ T I PN LTLD + +YF D+ LD I + +G
Sbjct: 1457 SWGETAKIEKSGMDGTRRNILVDTSITTPNRLTLDRTSNMLYFVDTTLDAIMKIDTEGQN 1516
Query: 402 RQQVILIDLMVEFTNDLMGDN 422
++ L F+ + D
Sbjct: 1517 FMVIVTDRLYNPFSITVFEDQ 1537
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 129/294 (43%), Gaps = 52/294 (17%)
Query: 69 QDMNECEQPG--YCSQMC---TNTKGSYICSCNEGYVLEYDNHTCKAI-----NHSAAFL 118
+D N C + G CS C ++CSC E L + + C A+ +HSA +
Sbjct: 586 EDSNVCLKDGAPVCSHFCLLSPMATSGFVCSCPEDLYLNSNGNECIALSVIYTDHSAIHV 645
Query: 119 I----ISNR--------HSILVADLE-----------EKGKDHR-------AQDIVVSGL 148
+ I N+ +S+L D++ E G R + I+ +
Sbjct: 646 LTWPAIDNQLLPIETALNSVLSFDIDWTRRLLYWTDVETGNLLRCDLDGKNVKSILTNEF 705
Query: 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
L E + D G+IYW D IEV +G+ R ++ KD I RG+ L G +
Sbjct: 706 ILSETVRVDESTGNIYWTDVMRKTIEVISNDGSMRKIIIKDEIEMVRGLALYVEEG--LM 763
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK---LDFIDCK 265
FWTDWG +IE+ +DGSNR II + + WPN +T+D +R+ + D++ ++ D +
Sbjct: 764 FWTDWGAKAKIEKAFLDGSNREVIIDSDLGWPNHMTVDKVLKRIIWTDAQTHTIEMADFQ 823
Query: 266 SLEIKTNVN-----YSTIFRK--LYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
L+ T +N Y + + L W D N + L K N + VS
Sbjct: 824 GLQRYTLINDLYNPYGIVLYENVLVWTDSQLNQIYLLKEKDFFQHGNKTTSVSA 877
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 57/84 (67%)
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
LFW+DWG P+IE+ MDGSNR II TK+ +PNG+T+D +R+Y+ D+ L+ I++ N+
Sbjct: 2381 LFWSDWGIEPKIEKAWMDGSNREVIIKTKLLYPNGITIDYVHQRLYWVDAGLNVIEYANF 2440
Query: 398 DGTGRQQVILIDLMVEFTNDLMGD 421
DGT R+ + + + F+ L D
Sbjct: 2441 DGTERRSLDELTVPHPFSLTLFED 2464
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 48/203 (23%)
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
R L+WTD E + R +DG N +I++ + + +D +T +Y+ D K
Sbjct: 675 RLLYWTDV-ETGNLLRCDLDGKNVKSILTNEFILSETVRVDESTGNIYWTDVMR-----K 728
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ--LYEALALDLE 323
++E+ +N DGS I++ + + LAL +E
Sbjct: 729 TIEVISN-----------------------------DGSMRKIIIKDEIEMVRGLALYVE 759
Query: 324 NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 383
G++ FWTDWG +IE+ +DGSNR II + + WPN +T+D +R+
Sbjct: 760 EGLM-----------FWTDWGAKAKIEKAFLDGSNREVIIDSDLGWPNHMTVDKVLKRII 808
Query: 384 FADSKLDFIDFCNYDGTGRQQVI 406
+ D++ I+ ++ G R +I
Sbjct: 809 WTDAQTHTIEMADFQGLQRYTLI 831
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 14/151 (9%)
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
+ L+ ++ T+ LYW D +KI A +DG+ L+S + E
Sbjct: 1732 EGLDTVEDIAIDTVNDNLYWTDSSA----VKIEVARLDGTARKTLISDDINEP------R 1781
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384
G++ Y + LF++DWG + +IE+ MDG+ R +++T + WPNGL LD+ R+Y+
Sbjct: 1782 GIVVYPS---KGLLFFSDWGSHAKIEKTTMDGAIREKLVTTHLIWPNGLCLDLTEDRLYW 1838
Query: 385 ADSKLDFIDFCNYDGTGRQQVILIDLMVEFT 415
D+ + I+ DG G ++VI+ ++ F+
Sbjct: 1839 TDAHTNTIETVRLDG-GDRKVIVTNIPHPFS 1868
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 142/330 (43%), Gaps = 33/330 (10%)
Query: 127 LVADLEEKGKDHRAQDIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
+V +E+ G D ++++VS L GL D+ G ++W D +L +E CD G +R V
Sbjct: 463 VVPKIEKAGMDGSDREVIVSQNLMWPNGLTIDYATGRLFWTDGKLKLLESCDLAGKDRQV 522
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
+ + + P + + + ++W+D N G N + I++T + P + +
Sbjct: 523 VKEIGLLYPFALTVFENN----VYWSDSATNTIHSAHKYTGHNDTVILAT--WKPRDVKV 576
Query: 246 DIATRRVYFADSKLDFID--------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
R+ DS + D C + T+ + LY G + L +
Sbjct: 577 FHELRQPRLEDSNVCLKDGAPVCSHFCLLSPMATSGFVCSCPEDLYLNSNGNECIALSV- 635
Query: 298 KANMDGSNASILVSGQLYEALALDLE---NGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
D S +L + L L +E N +L + R L+WTD E + R +
Sbjct: 636 -IYTDHSAIHVLTWPAIDNQL-LPIETALNSVLSFDIDWTRRLLYWTDV-ETGNLLRCDL 692
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
DG N +I++ + + +D +T +Y+ D I+ + DG+ R+ I+I +E
Sbjct: 693 DGKNVKSILTNEFILSETVRVDESTGNIYWTDVMRKTIEVISNDGSMRK--IIIKDEIEM 750
Query: 415 TNDLMGDNGVPALALDLENGMLYYSTEGAE 444
V LAL +E G+++++ GA+
Sbjct: 751 ---------VRGLALYVEEGLMFWTDWGAK 771
>gi|345800484|ref|XP_003434708.1| PREDICTED: low-density lipoprotein receptor-related protein 8
isoform 1 [Canis lupus familiaris]
Length = 901
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 153/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 308 CVPTLKRCNQEQDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGYQLL 366
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG + C C+ GY ++ CKA+ + LI +N
Sbjct: 367 -DQKTCGDIDECEDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAVAGKSPSLIFTN 425
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D Q
Sbjct: 426 RHEVRRIDLVKRDYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPAEQ 485
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+++V L EGLA DW+ HIYW DS I V +G R L ++++PR + +D
Sbjct: 486 EVLVDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATMDGARRCTLFSRDLSEPRAIAVD 545
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG +IE+ G++G +R T++S I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 546 PLRG--FMYWSDWGYQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLNQRLYWVDSKL 602
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 174/416 (41%), Gaps = 79/416 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTCHPT--PLGALCTCPPGEIL 61
CV+L CDG DC + +DE C L C+ +F TC PT CP G
Sbjct: 269 CVHLGWRCDGDRDCKDKSDEA-DCPLGTCRGDEFQCGDGTCVPTLKRCNQEQDCPDG--- 324
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SAA 116
S+++ Q +NEC G CS +CT+ K + C+C GY L D TC I+ A
Sbjct: 325 SDEAGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGYQL-LDQKTCGDIDECEDPDAC 383
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
I N + + D + V G + I + + + RI++
Sbjct: 384 SQICVNYKGYFKCECHPGYE----MDTLTKNCKAVAGKSPSLIFTNRH----EVRRIDLV 435
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RSTI 232
+ + I + K+ + LD T ++W D +I MD ++ + +
Sbjct: 436 KRDYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPAEQEVL 488
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
+ +++ P GL +D + + +YW D G
Sbjct: 489 VDEQLHSPEGLAVDW------------------------------VHKHIYWTDSGNK-- 516
Query: 293 PLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
I A MDG+ L S L E A+A+D G +Y W+DWG +IE
Sbjct: 517 --TISVATMDGARRCTLFSRDLSEPRAIAVDPLRGFMY-----------WSDWGYQAKIE 563
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ G++G +R T++S I WPNG+TLD+ +R+Y+ DSKL + + G R+ +I
Sbjct: 564 KSGLNGVDRQTLVSDNIEWPNGITLDLLNQRLYWVDSKLHQLSSIDLSGGNRKMLI 619
>gi|444724854|gb|ELW65441.1| Low-density lipoprotein receptor-related protein 8 [Tupaia
chinensis]
Length = 1069
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 151/298 (50%), Gaps = 46/298 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CV+ KVCD + DC + +DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 476 CVDGGKVCDAQRDCRDWSDELLKGCGLNECLHNNGGCSHICTDLKIGFECTCPAGFRLL- 534
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D TC D++ECE P CSQ+C N KG + C C GY ++ CKA+ + LI +NR
Sbjct: 535 DQKTCGDIDECEDPDACSQICVNYKGYFKCECYPGYEMDTVTKNCKAVAGKSPSLIFTNR 594
Query: 124 HSILVADL-----------------------------------------EEKGKDHRAQD 142
H + DL +K D Q
Sbjct: 595 HEVRRIDLVKRDYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSASMDKASDQAEQK 654
Query: 143 IVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+++ L EGLA DW+ HIYW DS I V +G R L ++++PR + +DP
Sbjct: 655 VLIDQQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGRRRCTLFSQDLSEPRAIAVDP 714
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++W+DWG +IE+ G++G +R T++S I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 715 LRG--FMYWSDWGYQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLNQRLYWVDSKL 770
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 173/427 (40%), Gaps = 97/427 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT---CPPGEIL 61
CV K C+ + DCP+G+DE GC L +TC P C C G +
Sbjct: 435 CVLAIKRCNQEQDCPDGSDEA-GC----------LQESTCE-GPRRFQCKSGECVDGGKV 482
Query: 62 SNDSVTCQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110
+ C+D +NEC G CS +CT+ K + C+C G+ L D TC
Sbjct: 483 CDAQRDCRDWSDELLKGCGLNECLHNNGGCSHICTDLKIGFECTCPAGFRL-LDQKTCGD 541
Query: 111 INH----SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
I+ A I N + + D V V G + I + +
Sbjct: 542 IDECEDPDACSQICVNYKGYFKCECYPGYE----MDTVTKNCKAVAGKSPSLIFTNRH-- 595
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226
+ RI++ + + I + K+ + LD T ++W D +I MD
Sbjct: 596 --EVRRIDLVKRDYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSASMDK 646
Query: 227 SN----RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
++ + +I +++ P GL +D + + +
Sbjct: 647 ASDQAEQKVLIDQQLHSPEGLAVDW------------------------------VHKHI 676
Query: 283 YWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFW 340
YW D G + + A +DG L S L E A+A+D G +Y W
Sbjct: 677 YWTDSGNKTISV----ATVDGRRRCTLFSQDLSEPRAIAVDPLRGFMY-----------W 721
Query: 341 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
+DWG +IE+ G++G +R T++S I WPNG+TLD+ +R+Y+ DSKL + ++ G
Sbjct: 722 SDWGYQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLNQRLYWVDSKLHQLSSIDFSGG 781
Query: 401 GRQQVIL 407
R+ +I
Sbjct: 782 NRKMLIF 788
>gi|194207437|ref|XP_001493081.2| PREDICTED: low-density lipoprotein receptor-related protein 8
[Equus caballus]
Length = 923
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 154/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 271 CVPAVKRCNQEQDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGYRLL 329
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG + C C+ GY ++ CKA+ + LI +N
Sbjct: 330 -DQKTCGDIDECEDPDTCSQICVNYKGYFKCECHPGYEMDTLTKNCKAVAGRSPSLIFTN 388
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D Q
Sbjct: 389 RHEVRRIDLVKRDYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPAEQ 448
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++++ L EGLA DW+ HIYW DS I V +G R L ++++PR + +D
Sbjct: 449 EVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRHTLFSRDLSEPRAIAVD 508
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG +IE+ G++G++R T++S I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 509 PLQG--FMYWSDWGYQAKIEKSGLNGADRQTLVSDNIEWPNGITLDLLNQRLYWVDSKL 565
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 173/414 (41%), Gaps = 75/414 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTCHPTPLGALCT----CPPGE 59
CV+L CDG DC + +DE C L C+ +F TC P C CP G
Sbjct: 232 CVHLGWRCDGDRDCKDKSDEA-DCPLGTCRGDEFQCGDGTC--VPAVKRCNQEQDCPDG- 287
Query: 60 ILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL 118
S+++ Q +NEC G CS +CT+ K + C+C GY L D TC I+
Sbjct: 288 --SDEAGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGYRL-LDQKTCGDIDECEDPD 344
Query: 119 IISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDE 178
S + + D + V G + I + + + RI++
Sbjct: 345 TCSQICVNYKGYFKCECHPGYEMDTLTKNCKAVAGRSPSLIFTNRH----EVRRIDLVKR 400
Query: 179 NGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RSTIIS 234
+ + I + K+ + LD T ++W D +I MD ++ + +I
Sbjct: 401 DYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPAEQEVLID 453
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
+++ P GL +D + + +YW D G
Sbjct: 454 EQLHSPEGLAVDW------------------------------VHKHIYWTDSGNK---- 479
Query: 295 KIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
I A +DG L S L E A+A+D G +Y W+DWG +IE+
Sbjct: 480 TISVATVDGGRRHTLFSRDLSEPRAIAVDPLQGFMY-----------WSDWGYQAKIEKS 528
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
G++G++R T++S I WPNG+TLD+ +R+Y+ DSKL + ++ G R+ +I
Sbjct: 529 GLNGADRQTLVSDNIEWPNGITLDLLNQRLYWVDSKLHQLSSIDFSGGNRKMLI 582
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL--AKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D +G NR +L + D ++ P G+
Sbjct: 536 QTLVSDNIEWPNGITLDLLNQRLYWVDSKLHQLSSIDFSGGNRKMLISSPDFLSHPFGIA 595
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 596 V----FEDKVFWTD 605
>gi|195123466|ref|XP_002006227.1| GI18681 [Drosophila mojavensis]
gi|193911295|gb|EDW10162.1| GI18681 [Drosophila mojavensis]
Length = 4639
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 112/309 (36%), Positives = 152/309 (49%), Gaps = 51/309 (16%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
+++C+ ++++CDG DC + DEG C C H CS+ CH TP G +C+CPP L
Sbjct: 1156 SNKCITVSQLCDGHNDCEDTTDEGFLCADELCNHGHE-CSHNCHNTPEGYICSCPPHLYL 1214
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+ C + CE CSQ+C ++ Y C C EGY L YD TCK+ ++I +
Sbjct: 1215 QPNGKRCSMQHACEHWDTCSQVCESSGKGYACQCLEGYDLAYDKFTCKSTAPDEPYVIFT 1274
Query: 122 NRHSILVADLEE----------------------------------KGKDHRAQ------ 141
+R I +L+ K +R Q
Sbjct: 1275 DRQDIRGINLKTLTASSFYNAVRNIIALDFLYSNESSLDIFWTDVIDDKIYRGQLVGESL 1334
Query: 142 ----DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+V SGL EGLA DWIG ++YW+DS +++IEV NG+ R L N+ PR +
Sbjct: 1335 RNVEAVVHSGLSTTEGLAVDWIGKNLYWIDSNMDQIEVAKLNGSFRRTLIAGNMESPRAI 1394
Query: 198 MLDPSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIST---KIYWPNGLTLDIATRRVY 253
LDP G LFWTDW +N PRIER M G R TI + WPNGLTLD +RVY
Sbjct: 1395 ALDPREGL--LFWTDWDDNSPRIERCSMAGEGRRTISTNWQLSAGWPNGLTLDYTQKRVY 1452
Query: 254 FADSKLDFI 262
+ D+K D I
Sbjct: 1453 WVDAKSDSI 1461
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 188/412 (45%), Gaps = 87/412 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EILSN 63
C++ +CD + DC + +DE C+ EC + +C + C +G C C PG ++L
Sbjct: 2928 CISADLLCDRRNDCGDFSDE-ELCNENECLNA-DICEHECVDKVVGYECRCRPGYKVLPK 2985
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
C D++EC + CSQ C NT GSY C C +GY L D+HTCKA ++ LI SNR
Sbjct: 2986 SPHLCTDIDECAEQQPCSQTCINTYGSYKCLCAKGYELR-DHHTCKATSNVTMKLIFSNR 3044
Query: 124 H-----------SILVADLEEK----------------------------GKDHRAQDIV 144
+ SIL+ L +++ Q +
Sbjct: 3045 YYIRQVNHTGNGSILIHSLSNAVALDFDWDSQCLYWSDVTSTVGTIKRYCPAENKTQTLH 3104
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ L +GLA DW+ ++YW D L+ IEV +G R VL + + +PRG+ LDP
Sbjct: 3105 QAMLKNPDGLAVDWVAKNLYWCDKGLDTIEVSQLDGKYRRVLINEQLREPRGIALDPY-- 3162
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
R ++W+DWG+NP I + GMDGS II + WPN LT+ T+++++ D++ D I
Sbjct: 3163 QRHIYWSDWGDNPHIGKAGMDGSQPRMIIRENLGWPNALTISFETQQLFWGDAREDTISV 3222
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
L+ GN L + + SI S L+ A+ +
Sbjct: 3223 SDLD--------------------GNHTRLLLAR--------SINPSLNLHHIFAIAVWE 3254
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIG-MDGSNRSTIISTKIYWPNGLTL 375
+Y W+DW E IE DG N ST+I+T I+ P L +
Sbjct: 3255 DRIY-----------WSDW-ETKSIEYCNKYDGQNCSTLITT-IHRPMDLRV 3293
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 137/311 (44%), Gaps = 62/311 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL-SN 63
C+ L++ CDG DC N + CD CS C TP GA C CP G++ S
Sbjct: 105 CLELSRFCDGHWDCDNDELQ---CDKQNVACAALNCSYNCKLTPQGARCYCPAGQVPESA 161
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN----------- 112
+S C D +EC PG C Q C NT GSY CSC GY + + C+AIN
Sbjct: 162 NSTRCVDYDECSVPGTCDQQCRNTPGSYECSCISGYTKQGSH--CRAINVPPSEPATLSL 219
Query: 113 ------------------------------------HSAAFLIISNRHSILVADLEEKGK 136
H L + + S LV +
Sbjct: 220 LSVGTIRRISTAVNGTGAGELLSTQPVQYTLAYEVWHRNRTLCMLQKMSELVIQCQRIDD 279
Query: 137 DHRAQDIVVSGLD----LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
+ + VS + + + DW+ G+ Y+L+ + +C N L +
Sbjct: 280 ANVNWTLPVSAFNSPHQIFVEMRLDWLSGNWYFLNEDDGMVYLC-SNAVTFCRLILQQVE 338
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QP ++LDP+ G +LF+TDW +P + R +DGSNR+T+++T++Y + +TLD+A+ V
Sbjct: 339 QPSSLVLDPTKG--YLFYTDW--SPSLSRALLDGSNRTTLVNTQVYHLSSVTLDLASEHV 394
Query: 253 YFADSKLDFID 263
Y+ D D I+
Sbjct: 395 YWIDVYKDIIE 405
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 157/411 (38%), Gaps = 84/411 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ + CDGK DC +G+DE P + C H GA C ++L +
Sbjct: 2885 CIFKNQTCDGKPDCGDGSDELP----SLCMHTRACNGADDFRCKNGA---CISADLLCDR 2937
Query: 65 SVTCQDM--------NECEQPGYCSQMCTNTKGSYICSCNEGY-VLEYDNHTCKAINHSA 115
C D NEC C C + Y C C GY VL H C I+ A
Sbjct: 2938 RNDCGDFSDEELCNENECLNADICEHECVDKVVGYECRCRPGYKVLPKSPHLCTDIDECA 2997
Query: 116 AFLIISN-------RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS 168
S + L A KG + R + ++ L + S
Sbjct: 2998 EQQPCSQTCINTYGSYKCLCA----KGYELRDHHTCKATSNVTMKLIF-----------S 3042
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I + G I++ + + LD ++ L+W+D
Sbjct: 3043 NRYYIRQVNHTGNGSILIH----SLSNAVALDFDWDSQCLYWSDV--------------- 3083
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
ST+ + K Y P A++K + L+ + + + LYW D+G
Sbjct: 3084 TSTVGTIKRYCP--------------AENKTQTLHQAMLKNPDGLAVDWVAKNLYWCDKG 3129
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ + + + +DG +L++ QL E + L+ R ++W+DWG+NP
Sbjct: 3130 LDTIEV----SQLDGKYRRVLINEQLREPRGIALDPYQ---------RHIYWSDWGDNPH 3176
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
I + GMDGS II + WPN LT+ T+++++ D++ D I + DG
Sbjct: 3177 IGKAGMDGSQPRMIIRENLGWPNALTISFETQQLFWGDAREDTISVSDLDG 3227
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 106/245 (43%), Gaps = 61/245 (24%)
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL--- 166
+ N+ A + S+ + + G R Q I+ G VEGLAYD + ++W
Sbjct: 2250 SYNYEAQLVYYSDVQLSTINQVHFNGSGQR-QLIMQQGR--VEGLAYDMVNDQLFWTSNN 2306
Query: 167 DSRLNRIEV------CDENGTN-RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE-NPR 218
D+ + +E+ ++N + R VL + +PRG+ ++P G ++WT+W E +P
Sbjct: 2307 DAAIRSLELQYLSPEAEKNLQHVRNVLRLQSKDKPRGISVEPCLGM--IYWTNWNEESPS 2364
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
I+R + G II T I PN LTLD+ +++Y+AD++LD
Sbjct: 2365 IQRAYLTGYGVERIIRTDIKMPNALTLDLEHQQLYWADARLD------------------ 2406
Query: 279 FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWL 338
KI + N DG+N +L A A M Y L L
Sbjct: 2407 ----------------KIERVNYDGTNRVVLAHTTPKHAFA------MAVYGDL-----L 2439
Query: 339 FWTDW 343
FWTDW
Sbjct: 2440 FWTDW 2444
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 147/350 (42%), Gaps = 68/350 (19%)
Query: 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
D + G+A DWI G+IYW D + N IEV +G+NR V+ N+ +P + +DP G
Sbjct: 1981 DWLGGIAIDWIAGNIYWSDMKRNIIEVSRLDGSNRYVVVS-NVERPTALAVDPVQGM-LF 2038
Query: 209 FWTDWGENPRIERIGMDGSNRSTIIS-TKIYWP-NGLTLDIATRRVYFADS----KLDFI 262
F TD I R G+DGS +++ T WP L +D+ +VY+ K+D+
Sbjct: 2039 FVTD----QYIGRTGLDGSQLFVLVNQTHTNWPVKSLIVDMDATKVYWCSRNALMKVDYD 2094
Query: 263 -DCKSLEIKTNVNYSTIFRK----LYWIDEGGNGVPLKIGK-ANMDGSNASILVSGQLYE 316
+ + + VN K LYW N +K+ AN+ S +
Sbjct: 2095 GNLREELLNDTVNDIVALAKLGDYLYWAGNSYNKGVVKVAPLANLSQSREVLKTEQDAIR 2154
Query: 317 ALAL-----------------DLENGMLYYST---------------LKCTRWLFWTDWG 344
L + E+ LY T L C + + +
Sbjct: 2155 DLKIYSKRVQQGTNPCAQNNGGCEHLCLYNGTNTVCACSYSRLAADGLSCEPYDNFLLFS 2214
Query: 345 ENPRIERIGM-DGSNRS---TIISTKIYWPN--GLTLDIATRRVYFADSKLDFIDFCNYD 398
IE I M + +N++ II+ + N ++ + + VY++D +L I+ +++
Sbjct: 2215 YRSNIESIHMTEHANKNWPVQIITNETLMRNVVAISYNYEAQLVYYSDVQLSTINQVHFN 2274
Query: 399 GTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKT 448
G+G++Q+I+ VE LA D+ N L++++ +++
Sbjct: 2275 GSGQRQLIMQQGRVE------------GLAYDMVNDQLFWTSNNDAAIRS 2312
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 120/327 (36%), Gaps = 83/327 (25%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG--CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + +CDG DC N DE L +C+H C N C
Sbjct: 3719 CIRKSALCDGVNDCGNNEDESDQVCAALPKCRHDQFQCEND----------DCISKNFRC 3768
Query: 63 NDSVTCQDMNE---CEQP----GYCSQMCTNTK-GSYICSCNEGYVLE-YDNHTCKAINH 113
+ C D ++ C+ P G CSQ+C K G Y C C GY N TC A
Sbjct: 3769 DGQYNCIDGSDEMNCQPPVCGFGTCSQICIEKKAGHYNCKCTTGYYKGGAKNATCLASGP 3828
Query: 114 SAAFLIISNR-------------------------------------------------- 123
L+ S +
Sbjct: 3829 DQILLLASEQEFRFILPAKQEGTTVVGFFQTDSLKIDVFDILIRPKDTLLFWIDSHHGKV 3888
Query: 124 HSILVADLEEKGKDHRAQDIV-------VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
H++ +A +G R + + + LD + LA DWI +Y +DSR N+I
Sbjct: 3889 HTMKIATPHVEGTGVRVRRDLKELTAFNIPDLDDPKSLAVDWITQMVYIIDSRHNQIIAT 3948
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 236
D G I L + P ++L+P +R + W+ I +DG+N+ +++
Sbjct: 3949 DIEGKKYISLVSTGMN-PTDIVLEPE--SRVMIWSTLENG--ILVASLDGTNKKSLVERD 4003
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFID 263
+ WP L++D T R+Y+AD + I+
Sbjct: 4004 VGWPISLSIDYPTGRLYWADYRKGTIE 4030
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 330 STLKCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 388
S C ++WT+W E +P I+R + G II T I PN LTLD+ +++Y+AD++
Sbjct: 2345 SVEPCLGMIYWTNWNEESPSIQRAYLTGYGVERIIRTDIKMPNALTLDLEHQQLYWADAR 2404
Query: 389 LDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
LD I+ NYDGT R + F + GD
Sbjct: 2405 LDKIERVNYDGTNRVVLAHTTPKHAFAMAVYGD 2437
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
+LF+TDW +P + R +DGSNR+T+++T++Y + +TLD+A+ VY+ D D I+ N
Sbjct: 351 YLFYTDW--SPSLSRALLDGSNRTTLVNTQVYHLSSVTLDLASEHVYWIDVYKDIIERVN 408
Query: 397 YDGTGR 402
Y+G R
Sbjct: 409 YEGQQR 414
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 95/240 (39%), Gaps = 59/240 (24%)
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+G V +AYDW+ H+YW + ++ V ++ VL + P + LD PGT
Sbjct: 624 TGWRKVRAMAYDWVNDHLYW--TEYQKLHVAPLRNMSK-VLTFNIDCNPMSLELD--PGT 678
Query: 206 RWLFWTDWGE---NPRIERIGMDGSNRSTIIST----KIYWPNGLTLDIATRRVYFADSK 258
L+WT W I MDG+++ + + + WP L +D +R+Y+ D +
Sbjct: 679 GLLYWTQWSFESCEAGIISAWMDGTHKELLAKSTEELSMRWPRSLDVDRRAKRIYWCDFR 738
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
L I+ + +DG+ +L+ +
Sbjct: 739 LGTIE----------------------------------RMKLDGTGRELLLKSEQLHPF 764
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY-WPNGLTLDI 377
A+ NG++Y W D N I R + +N ++ S+ ++ P+G +D+
Sbjct: 765 AIVQHNGVVY-----------WVD-NINSTIWRFHVHHANMTSTFSSTVHLQPSGNAVDL 812
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 21/140 (15%)
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
++W+D +N I + G+ II+T I P G +D + +YF+ + F+ C L
Sbjct: 1632 IYWSDIQQN-EIAKAGISSGLIGPIINTNIEKPYGFAIDWIAKHMYFSSGQ--FV-CTIL 1687
Query: 268 EIKTNVNYSTIFR----------------KLYWIDEGGNGVPLKIGKANMDGSNASIL-V 310
Y+T K+YWI + K+ ++N+DGS+ ++
Sbjct: 1688 ASNLQGEYTTHIHENLNMVDSIALDPANGKMYWIHSTHDTSLWKLEQSNLDGSDRLLIHT 1747
Query: 311 SGQLYEALALDLENGMLYYS 330
++L +D ++ LYY+
Sbjct: 1748 HNNSMQSLTMDFDSQRLYYA 1767
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 85/418 (20%), Positives = 149/418 (35%), Gaps = 92/418 (22%)
Query: 98 GYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGL--------- 148
G L+ NH + L+ R LV D D + +I +G+
Sbjct: 1597 GIDLQQPNHHTIPTIRQSPRLVAPQRIDFLVEDSHIYWSDIQQNEIAKAGISSGLIGPII 1656
Query: 149 ----DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ G A DWI H+Y+ + + +N+ + LDP+ G
Sbjct: 1657 NTNIEKPYGFAIDWIAKHMYFSSGQFVCTILASNLQGEYTTHIHENLNMVDSIALDPANG 1716
Query: 205 TR-WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA--DSKLDF 261
W+ T ++E+ +DGS+R +I T LT+D ++R+Y+A +S + +
Sbjct: 1717 KMYWIHSTHDTSLWKLEQSNLDGSDR-LLIHTHNNSMQSLTMDFDSQRLYYAYDNSGIAY 1775
Query: 262 IDCKSLEIK--------TNVNYSTIFRKLYWIDEGGNGVPLKIGKA---NM--------- 301
D E T+VN T++ + E V + K NM
Sbjct: 1776 YDIPKNETHIVLEASPITSVNSLTVYNGTLYFPENIQSVIMHCEKEQCFNMSFLRVNTKS 1835
Query: 302 ---------DGSNASILVSGQLYE------------------ALALDLENG--------- 325
D + +G L AL D+E
Sbjct: 1836 IQSMKMFYADAQTGTNTCAGPLRGGCEQLCLATSATDHVCRCALGYDVEPNNPTRCVPRA 1895
Query: 326 -MLYYS--TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
++YS L+ + T+ E P+ + + ++ +T I AT +
Sbjct: 1896 EFIFYSIDVLQGVEMIDPTEQFETPKPALVPITRTSLATFIE----------YHAATDML 1945
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN-DLMGDNGVPALALDLENGMLYYS 439
Y+ DS+L I DG+ R+ V+ + +F + D +G +A+D G +Y+S
Sbjct: 1946 YWGDSELGTISRVRRDGSHRETVLEAITLADFKHQDWLG-----GIAIDWIAGNIYWS 1998
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 14/112 (12%)
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST----KIYWPNG 372
+L LD G+LY W W+ I MDG+++ + + + WP
Sbjct: 671 SLELDPGTGLLY--------WTQWSFESCEAGIISAWMDGTHKELLAKSTEELSMRWPRS 722
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGV 424
L +D +R+Y+ D +L I+ DGTGR+ ++ + + F ++ NGV
Sbjct: 723 LDVDRRAKRIYWCDFRLGTIERMKLDGTGRELLLKSEQLHPFA--IVQHNGV 772
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 75/380 (19%), Positives = 149/380 (39%), Gaps = 85/380 (22%)
Query: 125 SILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL----DSRLNRIEVCDENG 180
+IL ++L+ + H + L++V+ +A D G +YW+ D+ L ++E + +G
Sbjct: 1685 TILASNLQGEYTTH-----IHENLNMVDSIALDPANGKMYWIHSTHDTSLWKLEQSNLDG 1739
Query: 181 TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG----ENPRIE-RIGMDGS-----NRS 230
++R+++ N + + + +D + + + G + P+ E I ++ S N
Sbjct: 1740 SDRLLIHTHNNSM-QSLTMDFDSQRLYYAYDNSGIAYYDIPKNETHIVLEASPITSVNSL 1798
Query: 231 TIISTKIYWPNGL---------------------TLDIATRRVYFADSKLDFIDC----- 264
T+ + +Y+P + T I + ++++AD++ C
Sbjct: 1799 TVYNGTLYFPENIQSVIMHCEKEQCFNMSFLRVNTKSIQSMKMFYADAQTGTNTCAGPLR 1858
Query: 265 ---KSLEIKTNVNYSTIFRKLYWIDEGGN-------------GVPLKIGKANMDGSNASI 308
+ L + T+ L + E N + + G +D +
Sbjct: 1859 GGCEQLCLATSATDHVCRCALGYDVEPNNPTRCVPRAEFIFYSIDVLQGVEMIDPTEQFE 1918
Query: 309 LVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY 368
L L + Y++ T L+W D E I R+ DGS+R T++
Sbjct: 1919 TPKPALVPITRTSLATFIEYHAA---TDMLYWGD-SELGTISRVRRDGSHRETVLEAITL 1974
Query: 369 -------WPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
W G+ +D +Y++D K + I+ DG+ R V+ VE
Sbjct: 1975 ADFKHQDWLGGIAIDWIAGNIYWSDMKRNIIEVSRLDGSNRYVVV---SNVERPT----- 2026
Query: 422 NGVPALALDLENGMLYYSTE 441
ALA+D GML++ T+
Sbjct: 2027 ----ALAVDPVQGMLFFVTD 2042
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL--AECKHKFGLCSNT 43
RC+ LT CD + DCPNG DE P C A C + C+N+
Sbjct: 3521 RCIPLTWRCDDEVDCPNGEDEPPSCHTSKATCDPTYFKCNNS 3562
>gi|195431345|ref|XP_002063703.1| GK15819 [Drosophila willistoni]
gi|194159788|gb|EDW74689.1| GK15819 [Drosophila willistoni]
Length = 4637
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 113/308 (36%), Positives = 151/308 (49%), Gaps = 51/308 (16%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
++C+ +T++CDGK DC + DEG C C+ +F CS+ CH TP G +C+CP L
Sbjct: 1151 NKCITVTQLCDGKNDCEDTTDEGFLCADKLCE-QFNECSHHCHNTPEGYICSCPAHLFLQ 1209
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
+ C + C+ CSQ+C Y C C EGY L YD TCK+ ++I +N
Sbjct: 1210 PNGKRCSMQHACDNWDTCSQVCETKGKGYQCRCLEGYDLAYDKFTCKSTAPDEPYVIFTN 1269
Query: 123 RHSILVADLEEKG----------------------------------KDHRAQ------- 141
R I +L+ K +R Q
Sbjct: 1270 RQDIRGINLKNMAVSSFYSSLRNIIALDFLYSNESSVEIYWTDVIDDKIYRGQLVGESLR 1329
Query: 142 ---DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
++ SGL EGLA DWIG ++YW+DS L++IEV NG+ R L N+ PR +
Sbjct: 1330 DVEAVIHSGLSTTEGLAVDWIGKNLYWIDSNLDQIEVAKLNGSFRRTLIAGNMESPRAIA 1389
Query: 199 LDPSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIST---KIYWPNGLTLDIATRRVYF 254
LDP G LFWTDW +N PRIER M G R I +T WPNGLTLD +RVY+
Sbjct: 1390 LDPREGL--LFWTDWDDNSPRIERCSMAGEGRRMISTTWQLSAGWPNGLTLDYTQKRVYW 1447
Query: 255 ADSKLDFI 262
D+K D I
Sbjct: 1448 VDAKSDSI 1455
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 161/333 (48%), Gaps = 56/333 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EILSN 63
C++ +CD + DC + +DE C++ EC K +C + C +G C C G ++L
Sbjct: 2921 CISADLLCDRRNDCADFSDE-ELCNVNECMIK-DICEHECVDKVIGYECRCREGYKLLPK 2978
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
+ C D++EC + CSQ C NT GSY C C +GY L D+HTCKA + LI SNR
Sbjct: 2979 STHLCTDIDECAEEQPCSQTCINTYGSYKCLCAKGYELR-DHHTCKATSDIPMKLIFSNR 3037
Query: 124 HSILVADLEEKGK---------------------------------------DHRAQDIV 144
+ I ++ G +++ Q +
Sbjct: 3038 YYIRQVNVTGNGTILINQLSNAVALDFDWDSQCLYWSDVTSTVGTIKRYCELENKTQTLH 3097
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ L +GLA DW+ ++YW D L+ IEV +G R VL +N+ +PRG+ LDP
Sbjct: 3098 QAMLKNPDGLAVDWVAKNLYWCDKGLDTIEVSQLDGKYRKVLINENLREPRGIALDPY-- 3155
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
R +FW+DWG++P I + GMDGSN II + WPN LT+ T+++++ D++ D I
Sbjct: 3156 QRNIFWSDWGDSPHIGKAGMDGSNPRMIIRDNLGWPNALTISFETQQLFWGDAREDTISV 3215
Query: 265 KSLE-----------IKTNVNYSTIFRKLYWID 286
L+ I ++N IF W D
Sbjct: 3216 SDLDGNHTRLLLARSINPHINLHHIFAIAVWED 3248
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 163/423 (38%), Gaps = 108/423 (25%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALC----------- 53
C+ + CDGK+DCP+G+DE LA LCS+T LC
Sbjct: 2878 CIPKNQTCDGKSDCPDGSDE-----LA------SLCSHT-------RLCNGADDFRCKNG 2919
Query: 54 TCPPGEILSNDSVTCQD--------MNECEQPGYCSQMCTNTKGSYICSCNEGY-VLEYD 104
C ++L + C D +NEC C C + Y C C EGY +L
Sbjct: 2920 ACISADLLCDRRNDCADFSDEELCNVNECMIKDICEHECVDKVIGYECRCREGYKLLPKS 2979
Query: 105 NHTCKAINHSAAFLIISN-------RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYD 157
H C I+ A S + L A KG + R + D+ L +
Sbjct: 2980 THLCTDIDECAEEQPCSQTCINTYGSYKCLCA----KGYELRDHHTCKATSDIPMKLIFS 3035
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP 217
NR + N T + + ++ + LD ++ L+W+D
Sbjct: 3036 -------------NRYYIRQVNVTGNGTILINQLSN--AVALDFDWDSQCLYWSDVTSTV 3080
Query: 218 -RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
I+R + T+ + P+GL +D
Sbjct: 3081 GTIKRYCELENKTQTLHQAMLKNPDGLAVDW----------------------------- 3111
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
+ + LYW D+G + + + + +DG +L++ L E + L+ R
Sbjct: 3112 -VAKNLYWCDKGLDTIEV----SQLDGKYRKVLINENLREPRGIALDPYQ---------R 3157
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
+FW+DWG++P I + GMDGSN II + WPN LT+ T+++++ D++ D I +
Sbjct: 3158 NIFWSDWGDSPHIGKAGMDGSNPRMIIRDNLGWPNALTISFETQQLFWGDAREDTISVSD 3217
Query: 397 YDG 399
DG
Sbjct: 3218 LDG 3220
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 136/324 (41%), Gaps = 99/324 (30%)
Query: 72 NECEQP-GYCSQMCTNTKGSYICSCN------EGYVLE-YDN-------------HTCKA 110
N C Q G C Q+C S +C+C+ +G+ E YDN H +
Sbjct: 2164 NPCAQNNGGCEQLCLYNGTSVVCACSHSRLAADGFSCEPYDNFLLFSYRSNIESIHMTEH 2223
Query: 111 INHSAAFLIISN----RHSILVA-DLEEK------------GKDH---RAQDIVVSGLDL 150
N + +ISN R+ I ++ + EE+ + H Q ++VS
Sbjct: 2224 ANKNWPVQLISNTTLMRNVIAISYNYEEQVVYYSDVQLSTINQVHFNGSGQRVLVSQQGR 2283
Query: 151 VEGLAYDWIGGHIYWL---DSRLNRIEV------CDENGTN-RIVLAKDNITQPRGMMLD 200
VEGLAYD + ++W D+ + +E+ D+N + + +L+ +PRG+ ++
Sbjct: 2284 VEGLAYDMVNEQLFWTSNNDAAIRSLELIHLSKSADDNLKHVKNILSLQVKDKPRGIAVE 2343
Query: 201 PSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G ++WT+W E +P I+R + G II I PN LTLD+ +++Y+AD++L
Sbjct: 2344 PCLGM--IYWTNWNEESPSIQRAYLSGYGVERIIKKDIKMPNALTLDVEQQQLYWADARL 2401
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI +AN DGSN +L A A
Sbjct: 2402 D----------------------------------KIERANYDGSNRVVLAHSTPKHAFA 2427
Query: 320 LDLENGMLYYSTLKCTRWLFWTDW 343
M Y L LFWTDW
Sbjct: 2428 ------MAVYGDL-----LFWTDW 2440
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL-SN 63
C+ L++ CDG DC N + CD CS C TP GA C CP G++ S
Sbjct: 84 CLELSRFCDGHWDCDNDELQ---CDKQNAACAALNCSYNCKLTPHGARCYCPQGQVPESA 140
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN 112
+S C D +EC + G C Q+C NT GSY CSC GY H C AIN
Sbjct: 141 NSTRCMDYDECSETGTCDQICRNTPGSYECSCVSGYAKANGRH-CLAIN 188
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 122/327 (37%), Gaps = 83/327 (25%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG--CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + +CDG DC N DE L +C+H C N C
Sbjct: 3712 CIRKSALCDGINDCGNNEDESDEVCAALPKCRHDQFQCEND----------DCINSIFRC 3761
Query: 63 NDSVTCQDMNE---CEQP----GYCSQMCTNTK-GSYICSCNEGYVL-EYDNHTCKAINH 113
+ C D ++ C P CSQ+C K G + C C EGY N TC A
Sbjct: 3762 DGQYNCIDGSDEMNCTPPVCGFASCSQICIEKKAGHFNCKCTEGYHKGPQKNATCLASGP 3821
Query: 114 SAAFLIISNR-------------------------------------------------- 123
L+ S +
Sbjct: 3822 DQILLLASEQEFRFILPAKQEGTTVVGFFQTDSLKIDVFDILIRPKDTLLFWIDSHHGKV 3881
Query: 124 HSILVADLEEKGKDHRAQDIV-------VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
H++ +A +G+ R + + + LD + LA DWI +Y +DSR N+I
Sbjct: 3882 HTMKIATPHVEGQGVRVRRDLKELKAFDIPELDDPKSLAVDWITQRVYIIDSRHNQILAT 3941
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 236
D G I L + P ++L+P +R + W+ EN I +DGSN+ +++
Sbjct: 3942 DIEGKKYISLVSTGMN-PTDIVLEPE--SRIMIWSTL-EN-GILVASLDGSNKKSLVERD 3996
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFID 263
+ WP L++D T R+Y+AD + I+
Sbjct: 3997 VGWPLSLSIDYPTGRLYWADYRKGTIE 4023
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 67/113 (59%), Gaps = 11/113 (9%)
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP---RGMMLDPSPGTRWLFW 210
L DW+ G+ Y L++ + + +C TN + + + Q ++LDP+ G +LF+
Sbjct: 296 LRLDWLSGNWYLLNADESLLYLC----TNAMTFCRLILQQAANLSSLVLDPTKG--FLFY 349
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
TDW +P + R +DG+N +T++ T+IY P+ +TLD+A+ VY+ D D I+
Sbjct: 350 TDW--SPSLARSLLDGTNSTTLVRTEIYHPSCVTLDLASEYVYWIDLYKDVIE 400
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLD 376
L+L +++ + C ++WT+W E +P I+R + G II I PN LTLD
Sbjct: 2329 LSLQVKDKPRGIAVEPCLGMIYWTNWNEESPSIQRAYLSGYGVERIIKKDIKMPNALTLD 2388
Query: 377 IATRRVYFADSKLDFIDFCNYDGTGR 402
+ +++Y+AD++LD I+ NYDG+ R
Sbjct: 2389 VEQQQLYWADARLDKIERANYDGSNR 2414
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 146/352 (41%), Gaps = 70/352 (19%)
Query: 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
D + G+A DW+ +IYW D++ N IEV +G+NR V+ N+ +P + +DP G L
Sbjct: 1975 DWLGGIAIDWVANNIYWSDTKRNLIEVARLDGSNRYVVVA-NVEKPTALAVDPLQGL--L 2031
Query: 209 FWTDWGENPRIERIGMDGSNRSTIIS-TKIYWP-NGLTLDIATRRVYFADSKLDFI---- 262
F+ I R+G+DGS +++ T+ W + L LD+ +VY+ + D +
Sbjct: 2032 FYV---TQQYIGRVGLDGSQPFILVNQTRNNWAVSSLILDMEATKVYWCERYPDALMKVD 2088
Query: 263 ---DCKSLEIKTNVNYSTIFRK----LYWIDEGGNGVPLKIGK-ANMDGSNASILVSGQL 314
+ + + + ++N K LYW + N +++ AN+ S +
Sbjct: 2089 YDGNLRQVLLNESLNNPVALAKMGDYLYWAENKYNEGNIRVAPLANLSQSKQVLQTQQDA 2148
Query: 315 YEALAL-----------------DLENGMLYYST---------------LKCTRWLFWTD 342
L + E LY T C + +
Sbjct: 2149 IRDLKIYSKRIQRGSNPCAQNNGGCEQLCLYNGTSVVCACSHSRLAADGFSCEPYDNFLL 2208
Query: 343 WGENPRIERIGM-DGSNRS---TIISTKIYWPN--GLTLDIATRRVYFADSKLDFIDFCN 396
+ IE I M + +N++ +IS N ++ + + VY++D +L I+ +
Sbjct: 2209 FSYRSNIESIHMTEHANKNWPVQLISNTTLMRNVIAISYNYEEQVVYYSDVQLSTINQVH 2268
Query: 397 YDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKT 448
++G+G++ ++ VE LA D+ N L++++ +++
Sbjct: 2269 FNGSGQRVLVSQQGRVE------------GLAYDMVNEQLFWTSNNDAAIRS 2308
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 102/258 (39%), Gaps = 61/258 (23%)
Query: 120 ISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDEN 179
+S + L ++ K + + GL V +AYDWI H+YW S+ +++V +
Sbjct: 591 VSVNSTELAYSIKSKSLNGSVSRTLNEGLKNVHAIAYDWINEHVYWAASQ--KLQVAPLS 648
Query: 180 GTNRIV-LAKDNITQPRGMMLDPSPGTRWLFWTDWGEN---PRIERIGMDGSNRSTIIS- 234
++I+ L+ D M L+ P T L+WT W I MDG+++ +
Sbjct: 649 NMSKILSLSMDC----DAMSLELDPTTGLLYWTQWAFQSCEAGIYSAWMDGTHKELLTKG 704
Query: 235 ---TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
I WP L +D T+R+Y+ D L I+
Sbjct: 705 TNDLPIQWPRSLDVDRRTKRIYWCDFHLGTIE---------------------------- 736
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
+ +DG+ IL + ++ ++ NGM+Y W D +N I R
Sbjct: 737 ------RIKLDGTGREILFKSEQFQPYSMVQHNGMIY-----------WVD-NKNSSIWR 778
Query: 352 IG-MDGSNRSTIISTKIY 368
+ +N ST S+ ++
Sbjct: 779 FHILHHANVSTTFSSTVH 796
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
+LF+TDW +P + R +DG+N +T++ T+IY P+ +TLD+A+ VY+ D D I+
Sbjct: 346 FLFYTDW--SPSLARSLLDGTNSTTLVRTEIYHPSCVTLDLASEYVYWIDLYKDVIERVT 403
Query: 397 YDGTGR 402
Y+G R
Sbjct: 404 YEGKKR 409
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 94/228 (41%), Gaps = 59/228 (25%)
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPNGLTLDIATRRVYFAD 256
T L+W D E I R+ DG+ R TI+S + W G+ +D +Y++D
Sbjct: 1935 ATDMLYWGD-NELGTISRVRRDGTQRKTILSAINLAGYKQQDWLGGIAIDWVANNIYWSD 1993
Query: 257 SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG-QLY 315
+K + I+ A +DGSN ++V+ +
Sbjct: 1994 TKRNLIE----------------------------------VARLDGSNRYVVVANVEKP 2019
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS-TKIYWP-NGL 373
ALA+D G+L+Y T + I R+G+DGS +++ T+ W + L
Sbjct: 2020 TALAVDPLQGLLFYVTQQ--------------YIGRVGLDGSQPFILVNQTRNNWAVSSL 2065
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
LD+ +VY+ + D + +YDG RQ ++ L MGD
Sbjct: 2066 ILDMEATKVYWCERYPDALMKVDYDGNLRQVLLNESLNNPVALAKMGD 2113
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 59/233 (25%)
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
+FWTD +N I G+ II+T I P G +D + +YF+ S
Sbjct: 1626 IFWTDVQQN-EISTAGISNGLIEPIINTNIEKPYGFAIDWIAKHMYFS----------SG 1674
Query: 268 EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA-SILVSGQLYEALALDLENGM 326
E K N I +N+ G IL + E++A+D NG
Sbjct: 1675 ETKCN-----------------------ILASNLKGEYVMHILDDLNMVESIAVDPPNGK 1711
Query: 327 LYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 386
LY W+ + GE ++E+ +DGS R +I LT+D ++R+Y+A
Sbjct: 1712 LY--------WIHSSAHGELSQLEQANLDGSGRQ-LIYEHANILQSLTMDFDSQRLYYA- 1761
Query: 387 SKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPAL-ALDLENGMLYY 438
YD +G + D++ T+ ++ + + ++ +L + NG LY+
Sbjct: 1762 ----------YDLSG---IAYYDIVKNETHKVLVASQITSVSSLTVYNGSLYF 1801
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 17/173 (9%)
Query: 98 GYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLD--LVE--- 152
G L+ NH + L+ R LV D D + +I +G+ L+E
Sbjct: 1591 GIDLQQPNHHTIPTIRQSPRLVAPQRIDFLVEDSRIFWTDVQQNEISTAGISNGLIEPII 1650
Query: 153 --------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA-KDNITQPRGMMLDPSP 203
G A DWI H+Y+ S + + N V+ D++ + +DP
Sbjct: 1651 NTNIEKPYGFAIDWIAKHMYF-SSGETKCNILASNLKGEYVMHILDDLNMVESIAVDPPN 1709
Query: 204 GT-RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G W+ + GE ++E+ +DGS R +I LT+D ++R+Y+A
Sbjct: 1710 GKLYWIHSSAHGELSQLEQANLDGSGRQ-LIYEHANILQSLTMDFDSQRLYYA 1761
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 20/114 (17%)
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPNGLTLDIATRRVYFADS 387
T L+W D E I R+ DG+ R TI+S + W G+ +D +Y++D+
Sbjct: 1936 TDMLYWGD-NELGTISRVRRDGTQRKTILSAINLAGYKQQDWLGGIAIDWVANNIYWSDT 1994
Query: 388 KLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTE 441
K + I+ DG+ R V+ VE ALA+D G+L+Y T+
Sbjct: 1995 KRNLIEVARLDGSNRYVVV---ANVEKPT---------ALAVDPLQGLLFYVTQ 2036
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 12/91 (13%)
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS----TKIYWPNG 372
+L LD G+LY+ T+W F + I MDG+++ + I WP
Sbjct: 664 SLELDPTTGLLYW-----TQWAFQSC---EAGIYSAWMDGTHKELLTKGTNDLPIQWPRS 715
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403
L +D T+R+Y+ D L I+ DGTGR+
Sbjct: 716 LDVDRRTKRIYWCDFHLGTIERIKLDGTGRE 746
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 14/108 (12%)
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
+FWTD +N I G+ II+T I P G +D + +YF+
Sbjct: 1626 IFWTDVQQN-EISTAGISNGLIEPIINTNIEKPYGFAIDWIAKHMYFS------------ 1672
Query: 398 DGTGRQQVILIDLMVEFTNDLMGD-NGVPALALDLENGMLYYSTEGAE 444
G + ++ +L E+ ++ D N V ++A+D NG LY+ A
Sbjct: 1673 SGETKCNILASNLKGEYVMHILDDLNMVESIAVDPPNGKLYWIHSSAH 1720
>gi|326925390|ref|XP_003208899.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
[Meleagris gallopavo]
Length = 877
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 156/304 (51%), Gaps = 47/304 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ KVCD DC + +DE C + EC G CS+ C +G C CPPG L
Sbjct: 288 ECIDGGKVCDSHRDCRDWSDEPLKECGINECSMNNGGCSHICKDLKIGYECECPPGYKLL 347
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG Y C C EGY ++ + CKA+ S +LI +N
Sbjct: 348 -DKKTCGDIDECENPDACSQICINYKGDYKCECYEGYEMDTLSKNCKAVGKS-PYLIFTN 405
Query: 123 RHSILVADLE-----------------------------------------EKGKDHRAQ 141
RH + DL +K D Q
Sbjct: 406 RHEVRKIDLVKRDYSRIIPMLKNVVALDVEVATNRIYWCDLFYRKIYSAYIDKASDTAEQ 465
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
I++ S L+ EGLA DW+ +IYW DS I V +G+ R L ++++PR + +D
Sbjct: 466 VILIDSQLNSPEGLAIDWVHKNIYWTDSGNKTISVATADGSRRKTLFNSDLSEPRAIAVD 525
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ R+++W+DWG+ +IE+ G++G R ++S I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 526 PT--RRFMYWSDWGDKAKIEKAGLNGVGRQMLVSDNIEWPNGITLDLLNQRLYWVDSKLH 583
Query: 261 FIDC 264
+ C
Sbjct: 584 SLSC 587
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 181/444 (40%), Gaps = 73/444 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC---DLAECKHKFGLCSNTCHPTPLGALC-TCPPGEI 60
C++ K CD DCP+ +DE GC E KF S C G +C +
Sbjct: 248 CIHGAKQCDKVHDCPDNSDEA-GCVQESACESPSKFQCKSGEC--IDGGKVCDSHRDCRD 304
Query: 61 LSNDSVTCQDMNECE-QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI 119
S++ + +NEC G CS +C + K Y C C GY L D TC I+
Sbjct: 305 WSDEPLKECGINECSMNNGGCSHICKDLKIGYECECPPGYKL-LDKKTCGDIDECENPDA 363
Query: 120 ISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDEN 179
S D + + + D + V Y I+ + +I++ +
Sbjct: 364 CSQICINYKGDYKCECYEGYEMDTLSKNCKAVGKSPY-----LIFTNRHEVRKIDLVKRD 418
Query: 180 GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE----NPRIERIGMDGSNRSTIIST 235
+ I + K+ + LD T ++W D + I++ D + + +I +
Sbjct: 419 YSRIIPMLKNVVA------LDVEVATNRIYWCDLFYRKIYSAYIDK-ASDTAEQVILIDS 471
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
++ P GL +D + + +YW D G + +
Sbjct: 472 QLNSPEGLAIDW------------------------------VHKNIYWTDSGNKTISV- 500
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A DGS L + L E A+ ++ R+++W+DWG+ +IE+ G++
Sbjct: 501 ---ATADGSRRKTLFNSDLSEPRAIAVDPTR---------RFMYWSDWGDKAKIEKAGLN 548
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI--LIDLMVE 413
G R ++S I WPNG+TLD+ +R+Y+ DSKL + +++G+ R+ +I + DL
Sbjct: 549 GVGRQMLVSDNIEWPNGITLDLLNQRLYWVDSKLHSLSCIDFNGSNRKVLISSVDDLSHP 608
Query: 414 FTNDLMGDNGVPALALDLENGMLY 437
F + D DLEN ++
Sbjct: 609 FGLAVFEDR---VFWTDLENEAIF 629
>gi|3386583|gb|AAC28497.1| putative vitellogenin receptor [Aedes aegypti]
gi|13273500|gb|AAK15810.1| vitellogenin receptor [Aedes aegypti]
Length = 1847
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 113/331 (34%), Positives = 164/331 (49%), Gaps = 53/331 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV+L VCDGK DC + +DEG C+ EC C C TP GA+C C PG +
Sbjct: 226 CVDLKLVCDGKDDCGDHSDEGGSCNSKECDSM--RCPEGCKATPHGAVCLCKPGFRFNKK 283
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S C+D+NECE+ G CSQ C NT GS+ C+C + + L+ D+ TC+ + + L+ + +
Sbjct: 284 SKVCEDINECERYGLCSQGCENTPGSFKCTCVDKFKLKDDSRTCELDDSTEPLLLYTTQK 343
Query: 125 SILVADLEEKGKDHRAQD--------------------------------------IVVS 146
SI L K + + A+D ++ S
Sbjct: 344 SIGGLHLNTKHQYYVAKDLSQVIGVSYDGRHVYWTDISFKTESIERSLEDGTKRELLLTS 403
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTR 206
GL E L DW+ G+IY+ DS I VC NG + +L +D + +PRG+ L P GT
Sbjct: 404 GLASPEDLEIDWLTGNIYFSDSGHMMIAVCSNNGVHCTILIQDTLHKPRGIALMPQNGT- 462
Query: 207 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKS 266
LF++DWG+N I GMDG N+ +I I+WPNGL LD R+Y+ D+KL I+
Sbjct: 463 -LFYSDWGDNAMIGAAGMDGKNKRILIEQDIHWPNGLCLDWPNGRLYWVDAKLKKIESIR 521
Query: 267 LE-----------IKTNVNYSTIFRKLYWID 286
++ +K + + +LYW D
Sbjct: 522 VDGTNRVTVLADVLKHPFSIAVFNDRLYWSD 552
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 132/297 (44%), Gaps = 53/297 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ +++VC+GK DC +G DEG GCD A K C + C TP GA+C C G L+ +
Sbjct: 1276 CIEMSQVCNGKKDCDDGKDEGKGCDDACAKSP---CEHKCIKTPTGAICECREGFTLAPN 1332
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS--- 121
+C D++EC + C+Q C NT GSY CSCN G++L D +CKA+ S L S
Sbjct: 1333 KKSCLDVDECAEGRPCAQQCRNTFGSYRCSCNPGFMLRSDKISCKAVGPSRYVLYTSYNQ 1392
Query: 122 ------NRHSILVADLEEKGKDHRAQDI----------------------------VVSG 147
N SI + ++ G + D+ V+
Sbjct: 1393 IRKLEVNPPSIRIL-MQANGSRITSMDVDIRRQMLYFTDEYNPVIYEHDMERNTTHVLYN 1451
Query: 148 LDLVEGLAYDWIGGHIYWLDSRLNRIEVC--DENGTNRI------VLAKDNITQPRGMML 199
+ E LA DWI G++Y+ D I++C +RI V K + P +L
Sbjct: 1452 VGHPEHLAVDWITGNVYFYDRSEPSIKLCSVQRQLCSRIITFASQVFVKAVVVDPVNRIL 1511
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
S W+F + I R MDG N+ +I+ + L +D + +Y AD
Sbjct: 1512 FYSLMHFWIFQV---PHSIIYRADMDGQNQ-LVITKDVSHVTSLQVDTENKLLYIAD 1564
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 112/286 (39%), Gaps = 69/286 (24%)
Query: 79 YCSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-ISN-----------RHS 125
+CS +C SY C+C G L+ D H+C+ L+ I+N RH
Sbjct: 600 FCSHLCLLAPNDSYSCACPYGMSLKADKHSCRETVKRQYLLVGIANYLVTLETQTFGRHE 659
Query: 126 ----------------------ILVADLEEKG------KDHRAQDIVVSGLDLVEGLAYD 157
I VAD +K K +Q ++ +G+ + LA+D
Sbjct: 660 SSQADAYQIFFHRMAFNSITGEIFVADNRQKAIFTVDPKTKSSQKLITTGIGNISALAFD 719
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ--PRGMMLDPSPGTRWLFWTDWGE 215
++G ++YW DS + +EV +R +L + + Q P G+ + G ++
Sbjct: 720 FLGNNLYWTDSERSTVEVFSLQTRHRAIL-QHYLGQDIPVGLAIVSEMGKMFIALRSPLP 778
Query: 216 NP--RIERIGMDGSNRSTIISTKIYWPNG---LTLDIATRRVYFAD---SKLDFIDCKS- 266
P I+R+ M G + + NG +D R VY+ D SK++F +
Sbjct: 779 VPHTHIDRLDMTGRGPHLHVIEERLSGNGSFNFVIDRDLRTVYWNDMGSSKIEFTSYEGD 838
Query: 267 ----------LEIKTNVNYSTIF------RKLYWIDEGGNGVPLKI 296
L + + +IF ++LYW D+ GV KI
Sbjct: 839 TRHLFREFLRLPVSIAIVGDSIFWTCYRSKRLYWSDKHNLGVTKKI 884
>gi|332230909|ref|XP_003264636.1| PREDICTED: low-density lipoprotein receptor-related protein 8
[Nomascus leucogenys]
Length = 961
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 154/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 309 CVLAIKRCNQEQDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL 367
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ P CSQ+C N KG + C C GY ++ CKA + LI +N
Sbjct: 368 -DQKTCGDIDECKDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAAGKSPSLIFTN 426
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D + Q
Sbjct: 427 RHEVRRIDLVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPKEQ 486
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++++ L EGLA DW+ HIYW DS I V +G R L N+++PR + +D
Sbjct: 487 EVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRCTLFSRNLSEPRAIAVD 546
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG+ +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 547 PLRG--FMYWSDWGDQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 603
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 174/416 (41%), Gaps = 79/416 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTC--HPTPLGALCTCPPGEIL 61
CV+L CDG DC + +DE C L C+ +F TC CP G
Sbjct: 270 CVHLGWRCDGDRDCKDKSDEA-DCPLGTCRGDEFQCGDGTCVLAIKRCNQEQDCPDG--- 325
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SAA 116
S+++ Q +NEC G CS +CT+ K + C+C G+ L D TC I+ A
Sbjct: 326 SDEAGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGDIDECKDPDAC 384
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
I N + + D++ G + I + + + RI++
Sbjct: 385 SQICVNYKGYFKCECYPGYE----MDLLTKNCKAAAGKSPSLIFTNRH----EVRRIDLV 436
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RSTI 232
N + I + K+ + LD T ++W D +I MD ++ + +
Sbjct: 437 KRNYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPKEQEVL 489
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
I +++ P GL +D + + +YW D G
Sbjct: 490 IDEQLHSPEGLAVDW------------------------------VHKHIYWTDSGNK-- 517
Query: 293 PLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
I A +DG L S L E A+A+D G +Y W+DWG+ +IE
Sbjct: 518 --TISVATVDGGRRCTLFSRNLSEPRAIAVDPLRGFMY-----------WSDWGDQAKIE 564
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL + ++ G R+ +I
Sbjct: 565 KSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTLI 620
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLAKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D +G NR ++ + D ++ P G+
Sbjct: 574 QTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTLISSTDFLSHPFGIA 633
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 634 V----FEDKVFWTD 643
>gi|332809039|ref|XP_003308158.1| PREDICTED: low-density lipoprotein receptor-related protein 8
isoform 2 [Pan troglodytes]
Length = 790
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 154/303 (50%), Gaps = 48/303 (15%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCD--LAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+ +CV + CDG+ DC GADE GC L EC H G CS+ C +G C CP G
Sbjct: 134 TSHKCVPASWRCDGEKDCEGGADEA-GCATWLNECLHNNGGCSHICTDLKIGFECACPAG 192
Query: 59 EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL 118
L D TC D++EC+ P CSQ+C N KG + C C GY ++ CKA + L
Sbjct: 193 FQLL-DQKTCGDIDECKDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAAGKSPSL 251
Query: 119 IISNRHSILVADL-----------------------------------------EEKGKD 137
I +NRH + DL +K D
Sbjct: 252 IFTNRHEVRRIDLVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASD 311
Query: 138 HRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ Q++++ L EGLA DW+ HIYW DS I V +G R L N+++PR
Sbjct: 312 PKEQEVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRRTLFSRNLSEPRA 371
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ +DP G +++W+DWG+ +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ D
Sbjct: 372 IAVDPLRG--FMYWSDWGDQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVD 429
Query: 257 SKL 259
SKL
Sbjct: 430 SKL 432
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 170/417 (40%), Gaps = 75/417 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHP-TPLGALCTCPPGEIL 61
C++ CDG+ +CP+G+DE C C + C T H P C
Sbjct: 94 HCIHERWKCDGEEECPDGSDESEATCTKQVCPAEKLSCGPTSHKCVPASWRCDGEKDCEG 153
Query: 62 SNDSVTCQD-MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SA 115
D C +NEC G CS +CT+ K + C+C G+ L D TC I+ A
Sbjct: 154 GADEAGCATWLNECLHNNGGCSHICTDLKIGFECACPAGFQL-LDQKTCGDIDECKDPDA 212
Query: 116 AFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEV 175
I N + + D++ G + I + + + RI++
Sbjct: 213 CSQICVNYKGYFKCECYPGYE----MDLLTKNCKAAAGKSPSLIFTNRH----EVRRIDL 264
Query: 176 CDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RST 231
N + I + K+ + LD T ++W D +I MD ++ +
Sbjct: 265 VKRNYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPKEQEV 317
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+I +++ P GL +D + + +YW D G
Sbjct: 318 LIDEQLHSPEGLAVDW------------------------------VHKHIYWTDSGNK- 346
Query: 292 VPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
I A +DG L S L E A+A+D G +Y W+DWG+ +I
Sbjct: 347 ---TISVATVDGGRRRTLFSRNLSEPRAIAVDPLRGFMY-----------WSDWGDQAKI 392
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
E+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL + ++ G R+ +I
Sbjct: 393 EKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKMLI 449
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL--AKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D +G NR +L + D ++ P G+
Sbjct: 403 QTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKMLISSTDFLSHPFGIA 462
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 463 V----FEDKVFWTD 472
>gi|296489057|tpg|DAA31170.1| TPA: low density lipoprotein receptor-related protein 8 [Bos
taurus]
Length = 797
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 152/299 (50%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 177 CVPAIKRCNQEQDCPDGSDET-GCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGYQLL 235
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG + C C+ GY ++ CKA+ + LI +N
Sbjct: 236 -DQKTCGDIDECEDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAVAGRSPSLIFTN 294
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K + Q
Sbjct: 295 RHEVRRIDLVKRDYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASNPVEQ 354
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D+++ L EGLA DW+ HIYW DS I V +G R L N+++PR + +D
Sbjct: 355 DVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGKRRCTLFSRNLSEPRAIAVD 414
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG +IE+ G++G R T++S I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 415 PLQG--FMYWSDWGFQAKIEKSGLNGVGRQTLVSDGIEWPNGITLDLLNQRLYWVDSKL 471
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 177/424 (41%), Gaps = 85/424 (20%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGC--DLAECK-HKFGLCSNTCHPTPLGALCT--- 54
+ +CV + CDG+ DC +GADE GC L C+ +F TC P C
Sbjct: 132 TSHKCVPASWRCDGEKDCESGADEA-GCATSLGTCRGDEFQCGDGTC--VPAIKRCNQEQ 188
Query: 55 -CPPGEILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN 112
CP G S+++ Q +NEC G CS +CT+ K + C+C GY L D TC I+
Sbjct: 189 DCPDG---SDETGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGYQL-LDQKTCGDID 244
Query: 113 H----SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS 168
A I N + + D + V G + I + +
Sbjct: 245 ECEDPDACSQICVNYKGYFKCECHPGYE----MDTLTKNCKAVAGRSPSLIFTNRH---- 296
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ RI++ + + I + K+ + LD T ++W D +I MD ++
Sbjct: 297 EVRRIDLVKRDYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKAS 349
Query: 229 ----RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYW 284
+ +I +++ P GL +D + + +YW
Sbjct: 350 NPVEQDVLIDEQLHSPEGLAVDW------------------------------VHKHIYW 379
Query: 285 IDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTD 342
D G I A +DG L S L E A+A+D G +Y W+D
Sbjct: 380 TDSGNK----TISVATVDGKRRCTLFSRNLSEPRAIAVDPLQGFMY-----------WSD 424
Query: 343 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
WG +IE+ G++G R T++S I WPNG+TLD+ +R+Y+ DSKL + ++ G R
Sbjct: 425 WGFQAKIEKSGLNGVGRQTLVSDGIEWPNGITLDLLNQRLYWVDSKLHQLSSIDFSGGNR 484
Query: 403 QQVI 406
+ +I
Sbjct: 485 KMLI 488
>gi|410921956|ref|XP_003974449.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
[Takifugu rubripes]
Length = 934
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 114/337 (33%), Positives = 168/337 (49%), Gaps = 59/337 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADE-GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++ ++VCD DC + +DE G C + EC+ G CS+ C +G C CP G L
Sbjct: 331 CIDSSRVCDSVKDCKDWSDEPGKECGMNECEDNNGGCSHICRDRRIGYECDCPAGYKLL- 389
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D TC D++ECE P CSQ+C N KG Y C C EGY ++ TCKA+ S +L+ +NR
Sbjct: 390 DKKTCGDIDECENPDACSQICINYKGDYKCECYEGYEMDPVTKTCKAVGKS-PYLMFTNR 448
Query: 124 HSILVADLEE-----------------------------------------KGKDHRAQD 142
H I DL + K D Q
Sbjct: 449 HEIRRIDLLKSEYTQVVPMLKNAVALDVDVSTNKMFWCDLYHGKIYSAYINKAGDSSQQV 508
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V L EGLA DWI +IYW DS I V +G R VL +++PR + +DP
Sbjct: 509 TLVDLLHSPEGLAVDWIHKNIYWTDSGNKSISVASGDGRKRKVLIATELSEPRAIAVDPH 568
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWG +IE+ G++G +R ++S I WPNG+TLD++ +R+Y+ DSKL +
Sbjct: 569 QG--FMYWSDWGGQAKIEKSGLNGVDRQVLVSEHIEWPNGITLDLSNKRLYWVDSKLHLL 626
Query: 263 -------DCKSLEIKTNVNYS-----TIFR-KLYWID 286
D + + + ++ + T+F +LYW D
Sbjct: 627 SSVDLNGDNRKVLLSSHHHLGHPFAVTVFEDRLYWTD 663
>gi|397487991|ref|XP_003815059.1| PREDICTED: low-density lipoprotein receptor-related protein 8
isoform 1 [Pan paniscus]
Length = 793
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 154/303 (50%), Gaps = 48/303 (15%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCD--LAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+ +CV + CDG+ DC GADE GC L EC H G CS+ C +G C CP G
Sbjct: 137 TSHKCVPASWRCDGEKDCEGGADEA-GCATWLNECLHNNGGCSHICTDLKIGFECACPAG 195
Query: 59 EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL 118
L D TC D++EC+ P CSQ+C N KG + C C GY ++ CKA + L
Sbjct: 196 FQLL-DQKTCGDIDECKDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAAGKSPSL 254
Query: 119 IISNRHSILVADL-----------------------------------------EEKGKD 137
I +NRH + DL +K D
Sbjct: 255 IFTNRHEVRRIDLVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASD 314
Query: 138 HRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ Q++++ L EGLA DW+ HIYW DS I V +G R L N+++PR
Sbjct: 315 PKEQEVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRRTLFSRNLSEPRA 374
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ +DP G +++W+DWG+ +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ D
Sbjct: 375 IAVDPLRG--FMYWSDWGDQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVD 432
Query: 257 SKL 259
SKL
Sbjct: 433 SKL 435
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 170/417 (40%), Gaps = 75/417 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHP-TPLGALCTCPPGEIL 61
C++ CDG+ +CP+G+DE C C + C T H P C
Sbjct: 97 HCIHERWKCDGEEECPDGSDESEATCTKQVCPAEKLSCGPTSHKCVPASWRCDGEKDCEG 156
Query: 62 SNDSVTCQD-MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SA 115
D C +NEC G CS +CT+ K + C+C G+ L D TC I+ A
Sbjct: 157 GADEAGCATWLNECLHNNGGCSHICTDLKIGFECACPAGFQL-LDQKTCGDIDECKDPDA 215
Query: 116 AFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEV 175
I N + + D++ G + I + + + RI++
Sbjct: 216 CSQICVNYKGYFKCECYPGYE----MDLLTKNCKAAAGKSPSLIFTNRH----EVRRIDL 267
Query: 176 CDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RST 231
N + I + K+ + LD T ++W D +I MD ++ +
Sbjct: 268 VKRNYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPKEQEV 320
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+I +++ P GL +D + + +YW D G
Sbjct: 321 LIDEQLHSPEGLAVDW------------------------------VHKHIYWTDSGNK- 349
Query: 292 VPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
I A +DG L S L E A+A+D G +Y W+DWG+ +I
Sbjct: 350 ---TISVATVDGGRRRTLFSRNLSEPRAIAVDPLRGFMY-----------WSDWGDQAKI 395
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
E+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL + ++ G R+ +I
Sbjct: 396 EKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKMLI 452
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL--AKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D +G NR +L + D ++ P G+
Sbjct: 406 QTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKMLISSTDFLSHPFGIA 465
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 466 V----FEDKVFWTD 475
>gi|350409315|ref|XP_003488691.1| PREDICTED: very low-density lipoprotein receptor-like [Bombus
impatiens]
Length = 892
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 153/299 (51%), Gaps = 45/299 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L+ VC+ DC DE C + EC G CS C P+G C C G L
Sbjct: 338 CIPLSSVCNKHRDCIGWEDENEELCGVNECSKNNGGCSQICIDLPIGFRCDCNAGYRLI- 396
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D+ TC D++EC +PG CSQ C N K S+ CSC GY+ + NHT CKA A+ L+ +
Sbjct: 397 DNRTCDDIDECLEPGTCSQFCLNEKSSFKCSCAPGYLKDPRNHTRCKAAEGHAS-LLFTR 455
Query: 123 RHSIL--------VADLEEKGKDHRAQDIVV----------------------------- 145
RH I + D+ + K A D V
Sbjct: 456 RHDIRKVALDRLEMTDIVKNTKMAAALDFVFRTGMIFWSDSSEKKIYKAPIDEGNERTVV 515
Query: 146 --SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
GL +GLA DWI HIYW DS+ + IE+ + G R L +D + +PR + L+P
Sbjct: 516 IDDGLTTSDGLAVDWIYSHIYWTDSKKSTIELANFEGNMRKTLIRDRVQEPRAIALNPLE 575
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G W+FWTDW + RIE+ GMDGS+R+ I+ + WPNGLTLD+ +++Y+ D+KL+ I
Sbjct: 576 G--WMFWTDWSDEARIEKAGMDGSHRTVIVDNDVQWPNGLTLDLIGKKIYWVDAKLNII 632
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 129 ADLEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVC--DENGTNRIV 185
A +E+ G D + ++V + GL D IG IYW+D++LN I C D +G ++
Sbjct: 587 ARIEKAGMDGSHRTVIVDNDVQWPNGLTLDLIGKKIYWVDAKLNIIGSCNYDGSGVRTVL 646
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDW 213
+ + + P + +++WTDW
Sbjct: 647 YSPEVLRHPFSITT----FEDYVYWTDW 670
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 13/100 (13%)
Query: 308 ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD-GSNRSTIISTK 366
I+ + ++ AL GM+ FW+D E +I + +D G+ R+ +I
Sbjct: 472 IVKNTKMAAALDFVFRTGMI-----------FWSDSSEK-KIYKAPIDEGNERTVVIDDG 519
Query: 367 IYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ +GL +D +Y+ DSK I+ N++G R+ +I
Sbjct: 520 LTTSDGLAVDWIYSHIYWTDSKKSTIELANFEGNMRKTLI 559
>gi|148231249|ref|NP_001091034.1| low-density lipoprotein receptor-related protein 8 precursor [Bos
taurus]
gi|88605122|gb|AAR12912.1| low density lipoprotein receptor-related protein 8 [Bos taurus]
Length = 829
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 152/299 (50%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 177 CVPAIKRCNQEQDCPDGSDET-GCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGYQLL 235
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG + C C+ GY ++ CKA+ + LI +N
Sbjct: 236 -DQKTCGDIDECEDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAVAGRSPSLIFTN 294
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K + Q
Sbjct: 295 RHEVRRIDLVKRDYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASNPVEQ 354
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D+++ L EGLA DW+ HIYW DS I V +G R L N+++PR + +D
Sbjct: 355 DVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGKRRCTLFSRNLSEPRAIAVD 414
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG +IE+ G++G R T++S I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 415 PLQG--FMYWSDWGFQAKIEKSGLNGVGRQTLVSDGIEWPNGITLDLLNQRLYWVDSKL 471
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 177/424 (41%), Gaps = 85/424 (20%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGC--DLAECK-HKFGLCSNTCHPTPLGALCT--- 54
+ +CV + CDG+ DC +GADE GC L C+ +F TC P C
Sbjct: 132 TSHKCVPASWRCDGEKDCESGADEA-GCATSLGTCRGDEFQCGDGTC--VPAIKRCNQEQ 188
Query: 55 -CPPGEILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN 112
CP G S+++ Q +NEC G CS +CT+ K + C+C GY L D TC I+
Sbjct: 189 DCPDG---SDETGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGYQL-LDQKTCGDID 244
Query: 113 H----SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS 168
A I N + + D + V G + I + +
Sbjct: 245 ECEDPDACSQICVNYKGYFKCECHPGYE----MDTLTKNCKAVAGRSPSLIFTNRH---- 296
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ RI++ + + I + K+ + LD T ++W D +I MD ++
Sbjct: 297 EVRRIDLVKRDYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKAS 349
Query: 229 ----RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYW 284
+ +I +++ P GL +D + + +YW
Sbjct: 350 NPVEQDVLIDEQLHSPEGLAVDW------------------------------VHKHIYW 379
Query: 285 IDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTD 342
D G I A +DG L S L E A+A+D G +Y W+D
Sbjct: 380 TDSGNK----TISVATVDGKRRCTLFSRNLSEPRAIAVDPLQGFMY-----------WSD 424
Query: 343 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
WG +IE+ G++G R T++S I WPNG+TLD+ +R+Y+ DSKL + ++ G R
Sbjct: 425 WGFQAKIEKSGLNGVGRQTLVSDGIEWPNGITLDLLNQRLYWVDSKLHQLSSIDFSGGNR 484
Query: 403 QQVI 406
+ +I
Sbjct: 485 KMLI 488
>gi|119627149|gb|EAX06744.1| low density lipoprotein receptor-related protein 8, apolipoprotein
e receptor, isoform CRA_e [Homo sapiens]
gi|119627150|gb|EAX06745.1| low density lipoprotein receptor-related protein 8, apolipoprotein
e receptor, isoform CRA_e [Homo sapiens]
Length = 700
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 154/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 182 CVLAIKHCNQEQDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL 240
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ P CSQ+C N KG + C C GY ++ CKA + LI +N
Sbjct: 241 -DQKTCGDIDECKDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAAGKSPSLIFTN 299
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D + Q
Sbjct: 300 RHEVRRIDLVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPKEQ 359
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++++ L EGLA DW+ HIYW DS I V +G R L N+++PR + +D
Sbjct: 360 EVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRRTLFSRNLSEPRAIAVD 419
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG+ +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 420 PLRG--FMYWSDWGDQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 476
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 178/422 (42%), Gaps = 81/422 (19%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGC--DLAECK-HKFGLCSNTC--HPTPLGALCTC 55
+ +CV + CDG+ DC GADE GC L C+ +F TC C
Sbjct: 137 TSHKCVPASWRCDGEKDCEGGADEA-GCATSLGTCRGDEFQCGDGTCVLAIKHCNQEQDC 195
Query: 56 PPGEILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH- 113
P G S+++ Q +NEC G CS +CT+ K + C+C G+ L D TC I+
Sbjct: 196 PDG---SDEAGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGDIDEC 251
Query: 114 ---SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL 170
A I N + + D++ G + I + + +
Sbjct: 252 KDPDACSQICVNYKGYFKCECYPGYE----MDLLTKNCKAAAGKSPSLIFTNRH----EV 303
Query: 171 NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN-- 228
RI++ N + I + K+ + LD T ++W D +I MD ++
Sbjct: 304 RRIDLVKRNYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDP 356
Query: 229 --RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWID 286
+ +I +++ P GL +D + + +YW D
Sbjct: 357 KEQEVLIDEQLHSPEGLAVDW------------------------------VHKHIYWTD 386
Query: 287 EGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWG 344
G + + A +DG L S L E A+A+D G +Y W+DWG
Sbjct: 387 SGNKTISV----ATVDGGRRRTLFSRNLSEPRAIAVDPLRGFMY-----------WSDWG 431
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
+ +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL + ++ G R+
Sbjct: 432 DQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKT 491
Query: 405 VI 406
+I
Sbjct: 492 LI 493
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLAKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D +G NR ++ + D ++ P G+
Sbjct: 447 QTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTLISSTDFLSHPFGIA 506
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 507 VFEDK----VFWTD 516
>gi|61744467|ref|NP_059992.3| low-density lipoprotein receptor-related protein 8 isoform 3
precursor [Homo sapiens]
Length = 700
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 154/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 182 CVLAIKHCNQEQDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL 240
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ P CSQ+C N KG + C C GY ++ CKA + LI +N
Sbjct: 241 -DQKTCGDIDECKDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAAGKSPSLIFTN 299
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D + Q
Sbjct: 300 RHEVRRIDLVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPKEQ 359
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++++ L EGLA DW+ HIYW DS I V +G R L N+++PR + +D
Sbjct: 360 EVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRRTLFSRNLSEPRAIAVD 419
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG+ +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 420 PLRG--FMYWSDWGDQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 476
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 178/422 (42%), Gaps = 81/422 (19%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGC--DLAECK-HKFGLCSNTC--HPTPLGALCTC 55
+ +CV + CDG+ DC GADE GC L C+ +F TC C
Sbjct: 137 TSHKCVPASWRCDGEKDCEGGADEA-GCATSLGTCRGDEFQCGDGTCVLAIKHCNQEQDC 195
Query: 56 PPGEILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH- 113
P G S+++ Q +NEC G CS +CT+ K + C+C G+ L D TC I+
Sbjct: 196 PDG---SDEAGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGDIDEC 251
Query: 114 ---SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL 170
A I N + + D++ G + I + + +
Sbjct: 252 KDPDACSQICVNYKGYFKCECYPGYE----MDLLTKNCKAAAGKSPSLIFTNRH----EV 303
Query: 171 NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN-- 228
RI++ N + I + K+ + LD T ++W D +I MD ++
Sbjct: 304 RRIDLVKRNYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDP 356
Query: 229 --RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWID 286
+ +I +++ P GL +D + + +YW D
Sbjct: 357 KEQEVLIDEQLHSPEGLAVDW------------------------------VHKHIYWTD 386
Query: 287 EGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWG 344
G + + A +DG L S L E A+A+D G +Y W+DWG
Sbjct: 387 SGNKTISV----ATVDGGRRRTLFSRNLSEPRAIAVDPLRGFMY-----------WSDWG 431
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
+ +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL + ++ G R+
Sbjct: 432 DQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKT 491
Query: 405 VI 406
+I
Sbjct: 492 LI 493
Score = 38.1 bits (87), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLAKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D +G NR ++ + D ++ P G+
Sbjct: 447 QTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTLISSTDFLSHPFGIA 506
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 507 VFEDK----VFWTD 516
>gi|157104069|ref|XP_001648242.1| low-density lipoprotein receptor (ldl) [Aedes aegypti]
gi|108869278|gb|EAT33503.1| AAEL014222-PA [Aedes aegypti]
Length = 1847
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/331 (34%), Positives = 164/331 (49%), Gaps = 53/331 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV+L VCDGK DC + +DEG C+ EC C C TP GA+C C PG +
Sbjct: 226 CVDLKLVCDGKDDCGDHSDEGGSCNSKECDSM--RCPEGCKATPHGAVCLCKPGFRFNKK 283
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S C+D+NECE+ G CSQ C NT GS+ C+C + + L+ D+ TC+ + + L+ + +
Sbjct: 284 SKVCEDINECERYGLCSQGCENTPGSFKCTCVDKFKLKDDSRTCELDDSTEPLLLYTTQK 343
Query: 125 SILVADLEEKGKDHRAQD--------------------------------------IVVS 146
SI L K + + A+D ++ S
Sbjct: 344 SIGGLHLNTKHQYYVAKDLSQVIGVSYDGRHVYWTDISFKTESIERSLEDGTKRELLLTS 403
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTR 206
GL E L DW+ G+IY+ DS I VC NG + +L +D + +PRG+ L P GT
Sbjct: 404 GLASPEDLEIDWLTGNIYFSDSGNMMIAVCSNNGVHCTILIQDTLHKPRGIALMPQNGT- 462
Query: 207 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKS 266
LF++DWG+N I GMDG N+ +I I+WPNGL LD R+Y+ D+KL I+
Sbjct: 463 -LFYSDWGDNAMIGAAGMDGKNKRILIEQDIHWPNGLCLDWPNGRLYWVDAKLKKIESIR 521
Query: 267 LE-----------IKTNVNYSTIFRKLYWID 286
++ +K + + +LYW D
Sbjct: 522 VDGTNRVTVLADVLKHPFSIAVFNDRLYWSD 552
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 132/296 (44%), Gaps = 51/296 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ +++VC+GK DC +G DEG GCD A K C + C TP GA+C C G L+ +
Sbjct: 1276 CIEMSQVCNGKKDCDDGKDEGKGCDDACAKSP---CEHKCIKTPTGAICECREGFTLAPN 1332
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS--- 121
+C D++EC + C+Q C NT GSY CSCN G++L D +CKA+ S L S
Sbjct: 1333 KKSCLDVDECAEGRPCAQQCRNTFGSYRCSCNPGFMLRSDKISCKAVGPSRYVLYTSYNQ 1392
Query: 122 -----------------NRHSILVADLEEKGK-------------DH---RAQDIVVSGL 148
N I D++ + + +H R V+ +
Sbjct: 1393 IRKLEVNPPSIRILMQANESRITSMDVDIRRQMLYFTDEYNPVIYEHDMERNTTHVLYNV 1452
Query: 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVC--DENGTNRI------VLAKDNITQPRGMMLD 200
E LA DWI G++Y+ D I++C +RI V K + P +L
Sbjct: 1453 GHPEHLAVDWITGNVYFYDRSEPSIKLCSVQRQLCSRIITFASQVFVKAVVVDPVNRILF 1512
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
S W+F + I R MDG N+ +I+ + L +D + +Y AD
Sbjct: 1513 YSLMHFWIFQV---PHSIIYRADMDGQNQ-LVITKDVSHVTSLQVDTENKLLYIAD 1564
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 112/286 (39%), Gaps = 69/286 (24%)
Query: 79 YCSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-ISN-----------RHS 125
+CS +C SY C+C G L+ D H+C+ L+ I+N RH
Sbjct: 600 FCSHLCLLAPNDSYSCACPYGMSLKADKHSCRETVKRQYLLVGIANYLVTLETQTFGRHE 659
Query: 126 ----------------------ILVADLEEKG------KDHRAQDIVVSGLDLVEGLAYD 157
I VAD +K K +Q ++ +G+ + LA+D
Sbjct: 660 SSQADAYQIFFHRMAFNSITGEIFVADNRQKAIFTVDPKTKSSQKLITTGIGNISALAFD 719
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ--PRGMMLDPSPGTRWLFWTDWGE 215
++G ++YW DS + +EV +R +L + + Q P G+ + G ++
Sbjct: 720 FLGNNLYWTDSERSTVEVFSLQTRHRAIL-QHYLGQDIPVGLAIVSEMGKMFIALRSPLP 778
Query: 216 NP--RIERIGMDGSNRSTIISTKIYWPNG---LTLDIATRRVYFAD---SKLDFIDCKS- 266
P I+R+ M G + + NG +D R VY+ D SK++F +
Sbjct: 779 VPHTHIDRLDMTGRGPHLHVIEERLSGNGSFNFVIDRDLRSVYWNDMGSSKIEFTSYEGD 838
Query: 267 ----------LEIKTNVNYSTIF------RKLYWIDEGGNGVPLKI 296
L + + +IF ++LYW D+ GV KI
Sbjct: 839 TRHLFREFLRLPVSIAIVGDSIFWTCYRSKRLYWSDKHNLGVTKKI 884
>gi|291414136|ref|XP_002723323.1| PREDICTED: low density lipoprotein receptor [Oryctolagus cuniculus]
Length = 831
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/301 (35%), Positives = 160/301 (53%), Gaps = 47/301 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++L KVC+ DC + +DE C EC G CS+TC +G C CP G L
Sbjct: 270 CISLDKVCNSARDCQDWSDEPIKECATNECMRGNGGCSHTCFDLRIGHECHCPKGYRLV- 328
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D C+D+NECE P CSQ+C N GSY C C G+ L+ + CKA++ S A+L +NR
Sbjct: 329 DQRRCEDINECEDPDICSQLCVNLAGSYKCECRAGFQLDPHSQACKAVD-SIAYLFFTNR 387
Query: 124 HSI------------LVADLE-------------------EKGKDHRAQ----------- 141
H + L+A+L+ + K + AQ
Sbjct: 388 HEVRKMTLDRSEYTSLIANLKNVVALDAEVASNRIYWSDLSQRKIYSAQIDGAHGFPAYD 447
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ S L +GLA DWI GHIYW DS L + V D G R L + ++PR +++DP
Sbjct: 448 TVISSDLQAPDGLAVDWIHGHIYWTDSVLGTVSVADTRGFRRKTLFRQEGSKPRAIVVDP 507
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
+ G +++WTDWG +IE+ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL
Sbjct: 508 AHG--FMYWTDWGVPAKIEKGGLNGVDVYSLVTEDIQWPNGITLDLSSGRLYWVDSKLHS 565
Query: 262 I 262
I
Sbjct: 566 I 566
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 171/474 (36%), Gaps = 106/474 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG---------------------CDLAECKHKFGLCSNT 43
CV CDG+ DC +G+DE P C EC H C
Sbjct: 141 CVPALWACDGEPDCDDGSDEWPARCGARPSPQPGRGPSPRHEFHCGSGECVHASWRCDGD 200
Query: 44 CHPTPLG-----ALCTCPPGEILSNDSVTCQDMNECEQPGYCSQM-----CTNT---KGS 90
A TC P E +D +C+Q C M C N +G
Sbjct: 201 ADCRDGSDERDCAAATCRPDEFQCSDGTCIHGSRQCDQQQDCGDMSDEVGCVNVTLCEGP 260
Query: 91 YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE----EKGKDHRAQDIVVS 146
C+ G + D K N + S+ A E G H +
Sbjct: 261 DKFKCHSGECISLD----KVCNSARDCQDWSDEPIKECATNECMRGNGGCSH-------T 309
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR---IVLAKDNITQPR-GMMLDPS 202
DL G G+ R I C++ + LA + R G LDP
Sbjct: 310 CFDLRIGHECHCPKGYRLVDQRRCEDINECEDPDICSQLCVNLAGSYKCECRAGFQLDPH 369
Query: 203 P-------GTRWLFWTDWGENPRIERIGMDGSNRSTII--------------STKIYWPN 241
+LF+T+ E + ++ +D S +++I S +IYW
Sbjct: 370 SQACKAVDSIAYLFFTNRHE---VRKMTLDRSEYTSLIANLKNVVALDAEVASNRIYWS- 425
Query: 242 GLTLDIATRRVYFAD-------SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
D++ R++Y A D + L+ + I +YW D V
Sbjct: 426 ----DLSQRKIYSAQIDGAHGFPAYDTVISSDLQAPDGLAVDWIHGHIYWTD----SVLG 477
Query: 295 KIGKANMDGSNASILV--SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+ A+ G L G A+ +D +G +Y WTDWG +IE+
Sbjct: 478 TVSVADTRGFRRKTLFRQEGSKPRAIVVDPAHGFMY-----------WTDWGVPAKIEKG 526
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL I + +G R+ V+
Sbjct: 527 GLNGVDVYSLVTEDIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNGGNRKTVL 580
>gi|224058239|ref|XP_002193782.1| PREDICTED: low-density lipoprotein receptor-related protein 8
[Taeniopygia guttata]
Length = 1035
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 156/304 (51%), Gaps = 47/304 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ KVCD DC + +DE C + EC G CS+ C +G C CPPG L
Sbjct: 441 ECIDGGKVCDSHRDCRDWSDEPLKDCGVNECSMNNGGCSHICKDLKIGYECECPPGYKLL 500
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG Y C C EGY ++ + CKA+ S +LI +N
Sbjct: 501 -DKKTCGDIDECENPDACSQICINYKGDYKCECYEGYEMDTLSKNCKAVGKS-PYLIFTN 558
Query: 123 RHSILVADLE-----------------------------------------EKGKDHRAQ 141
RH + DL +K D Q
Sbjct: 559 RHEVRKIDLVKRDYSRIIPMLKNVVALDVEVSTNRIYWCDLFYRKIYSAYIDKASDTAEQ 618
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
I++ S L+ EGLA DW+ +IYW DS I V +G+ R L ++++PR + +D
Sbjct: 619 VILIDSQLNSPEGLAIDWVHKNIYWTDSGNKTISVATADGSRRRTLFNSDLSEPRAIAVD 678
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ R+++W+DWG+ RIE+ G++G R +++ I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 679 PT--QRFMYWSDWGDKARIEKAGLNGVGRQVLVTDNIEWPNGITLDLLNQRLYWVDSKLH 736
Query: 261 FIDC 264
+ C
Sbjct: 737 SLSC 740
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 179/451 (39%), Gaps = 83/451 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC---DLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
C++ K CD DCP+ +DE GC E KF S C G +C
Sbjct: 401 CIHGAKQCDKVRDCPDNSDEA-GCVQESACESPSKFQCKSGEC--IDGGKVC-------- 449
Query: 62 SNDSVTCQD----------MNECE-QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110
+ C+D +NEC G CS +C + K Y C C GY L D TC
Sbjct: 450 -DSHRDCRDWSDEPLKDCGVNECSMNNGGCSHICKDLKIGYECECPPGYKL-LDKKTCGD 507
Query: 111 INHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL 170
I+ S D + + + D + V Y I+ +
Sbjct: 508 IDECENPDACSQICINYKGDYKCECYEGYEMDTLSKNCKAVGKSPY-----LIFTNRHEV 562
Query: 171 NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS 230
+I++ + +RI+ N+ + LD T ++W D
Sbjct: 563 RKIDLVKRD-YSRIIPMLKNV-----VALDVEVSTNRIYWCD------------------ 598
Query: 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN 290
+ KIY +V DS+L+ + +++ + + +YW D G
Sbjct: 599 -LFYRKIYSAYIDKASDTAEQVILIDSQLNSPEGLAIDW--------VHKNIYWTDSGNK 649
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
I A DGS L + L E A+ ++ R+++W+DWG+ RIE
Sbjct: 650 ----TISVATADGSRRRTLFNSDLSEPRAIAVDPTQ---------RFMYWSDWGDKARIE 696
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI--LI 408
+ G++G R +++ I WPNG+TLD+ +R+Y+ DSKL + +++G+ R+ +I +
Sbjct: 697 KAGLNGVGRQVLVTDNIEWPNGITLDLLNQRLYWVDSKLHSLSCIDFNGSNRKVLISSVD 756
Query: 409 DLMVEFTNDLMGDNGVPALALDLENGMLYYS 439
DL F + D DLEN ++ +
Sbjct: 757 DLSHPFGLAVFEDR---VFWTDLENEAIFSA 784
>gi|62988879|gb|AAY24266.1| unknown [Homo sapiens]
Length = 773
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/354 (33%), Positives = 181/354 (51%), Gaps = 71/354 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
RC+++ KVCDG DCP DE G C + C C CH TP G C CPPG
Sbjct: 278 RCISIYKVCDGILDCPGREDENNTSTGKYCSMTLCSAL--NCQYQCHETPYGGACFCPPG 335
Query: 59 EILS-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH-SAA 116
I++ NDS TC + ++C+ G C Q C + G ++C C EGY+LE + CKA + A
Sbjct: 336 YIINHNDSRTCVEFDDCQIWGICDQKCESRPGRHLCHCEEGYILERGQY-CKANDSFGEA 394
Query: 117 FLIISNRHSILVADLEEKGKDHR------------------------------------- 139
+I SN +L+ D+ G+ R
Sbjct: 395 SIIFSNGRDLLIGDIH--GRSFRILVESQNRGVAVGVAFHYHLQRVFWTDTVQNKVFSVD 452
Query: 140 -----AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
Q+++ ++ E LA DW+ IY +++++NRI++ + +G+ R+ L +N+ P
Sbjct: 453 INGLNIQEVLNVSVETPENLAVDWVNNKIYLVETKVNRIDMVNLDGSYRVTLITENLGHP 512
Query: 195 RGMMLDPSPGTRWLFWTDW----GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
RG+ +DP+ G +LF++DW GE P++ER MDGSNR ++ TK+ WP G+TLD+ ++
Sbjct: 513 RGIAVDPTVG--YLFFSDWESLSGE-PKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISK 569
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
RVY+ DS+ D+I+ V Y I RK + GG+ +P G + +G
Sbjct: 570 RVYWVDSRFDYIE--------TVTYDGIQRKT--VVHGGSLIPHPFGVSLFEGQ 613
>gi|157116559|ref|XP_001658550.1| low-density lipoprotein receptor (ldl) [Aedes aegypti]
gi|108876398|gb|EAT40623.1| AAEL007657-PA [Aedes aegypti]
Length = 1847
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/331 (34%), Positives = 163/331 (49%), Gaps = 53/331 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV+L VCDGK DC + +DEG C+ EC C C TP GA+C C PG +
Sbjct: 226 CVDLKLVCDGKDDCGDHSDEGGSCNSKECDSM--RCPEGCKATPHGAVCLCKPGFRFNKK 283
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S C+D+NECE+ G CSQ C NT GS+ C+C + L+ D+ TC+ + + L+ + +
Sbjct: 284 SKVCEDINECERYGLCSQGCENTPGSFKCTCVNKFKLKDDSRTCELDDSTEPLLLYTTQK 343
Query: 125 SILVADLEEKGKDHRAQD--------------------------------------IVVS 146
SI L K + + A+D ++ S
Sbjct: 344 SIGGLHLNTKHQYYVAKDLSQVIGVSYDGRHVYWTDISFKTESIERSLEDGTKRELLLTS 403
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTR 206
GL E L DW+ G+IY+ DS I VC NG + +L +D + +PRG+ L P GT
Sbjct: 404 GLASPEDLEIDWLTGNIYFSDSGHMMIAVCSNNGVHCTILIQDTLHKPRGIALMPQNGT- 462
Query: 207 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKS 266
LF++DWG+N I GMDG N+ +I I+WPNGL LD R+Y+ D+KL I+
Sbjct: 463 -LFYSDWGDNAMIGAAGMDGKNKRILIEQDIHWPNGLCLDWPNGRLYWVDAKLKKIESIR 521
Query: 267 LE-----------IKTNVNYSTIFRKLYWID 286
++ +K + + +LYW D
Sbjct: 522 VDGTNRVTVLADVLKHPFSIAVFNDRLYWSD 552
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 132/296 (44%), Gaps = 51/296 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ +++VC+GK DC +G DEG GCD A K C + C TP GA+C C G L+ +
Sbjct: 1276 CIEMSQVCNGKKDCDDGKDEGKGCDDACAKSP---CEHKCIKTPTGAICECREGFTLAPN 1332
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS--- 121
+C D++EC + C+Q C NT GSY CSCN G++L D +CKA+ S L S
Sbjct: 1333 KKSCLDVDECAEGRPCAQQCRNTFGSYRCSCNPGFMLRSDKISCKAVGPSRYVLYTSYNQ 1392
Query: 122 -----------------NRHSILVADLEEKGK-------------DH---RAQDIVVSGL 148
N I D++ + + +H R V+ +
Sbjct: 1393 IRKLEVNPPSIRILMQANESRITSMDVDIRRQMLYFTDEYNPVIYEHDMERNTTHVLYNV 1452
Query: 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVC--DENGTNRI------VLAKDNITQPRGMMLD 200
E LA DWI G++Y+ D I++C +RI V K + P +L
Sbjct: 1453 GHPEHLAVDWITGNVYFYDRSEPSIKLCSVQRQLCSRIITFASQVFVKAVVVDPVNRILF 1512
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
S W+F + I R MDG N+ +I+ + L +D + +Y AD
Sbjct: 1513 YSLMHFWIFQV---PHSIIYRADMDGQNQ-LVITKDVSHVTSLQVDTENKLLYIAD 1564
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 113/286 (39%), Gaps = 69/286 (24%)
Query: 79 YCSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAI-------------------------- 111
+CS +C SY C+C G L+ D H+C+
Sbjct: 600 FCSHLCLLAPNDSYSCACPYGMSLKADKHSCRETVKRQYLLMGIANYLVTLETQTFGRHE 659
Query: 112 -NHSAAFLIISNRHS-------ILVADLEEKG------KDHRAQDIVVSGLDLVEGLAYD 157
+ + A+ I +R + I VAD +K K +Q ++ +G+ + LA+D
Sbjct: 660 SSQADAYQIFFHRMAFNSITGEIFVADNRQKAIFTVDPKSKSSQKLITTGIGNISALAFD 719
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ--PRGMMLDPSPGTRWLFWTDWGE 215
++G ++YW DS + +EV +R ++ + + Q P G+ + G ++
Sbjct: 720 FLGNNLYWTDSERSTVEVFSLQTRHRAII-QHYLGQDIPVGLAIVSEMGKMFIALRSPLP 778
Query: 216 NP--RIERIGMDGSNRSTIISTKIYWPNG---LTLDIATRRVYFAD---SKLDFIDCKS- 266
P I+R+ M G + + NG +D R VY+ D SK++F +
Sbjct: 779 VPHTHIDRLDMTGRGPHLHVIEERLSGNGSFNFVIDRDLRSVYWNDMGSSKIEFTSYEGD 838
Query: 267 ----------LEIKTNVNYSTIF------RKLYWIDEGGNGVPLKI 296
L + + +IF ++LYW D+ GV KI
Sbjct: 839 TRHLFREFLRLPVSIAIVGDSIFWTCYRSKRLYWSDKHNLGVTKKI 884
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 91/448 (20%), Positives = 154/448 (34%), Gaps = 97/448 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG--PGCDLAECKHKFGLCSNT------------------ 43
+C+++ C+G +CP+G DE C L E + K G C
Sbjct: 1189 KCLDIAVRCNGTAECPDGEDEAGCSNCGLQEFQCKSGKCIRKEWRCDKEVDCDDGSDEVD 1248
Query: 44 -----------CHPTPLGALCTCPPGEILSNDSVTCQDMNECEQ-------------PGY 79
H G C PG + V C +C+
Sbjct: 1249 CVNGTAAEHMEVHVACGGGTFECKPGVCIEMSQV-CNGKKDCDDGKDEGKGCDDACAKSP 1307
Query: 80 CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHR 139
C C T IC C EG+ L + +C ++ A + + +R
Sbjct: 1308 CEHKCIKTPTGAICECREGFTLAPNKKSCLDVDECAEGRPCAQQ-------CRNTFGSYR 1360
Query: 140 AQDIVVSGLDL-VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
G L + ++ +G Y L + N+I + N + +L + N + R
Sbjct: 1361 CS--CNPGFMLRSDKISCKAVGPSRYVLYTSYNQIRKLEVNPPSIRILMQAN--ESRITS 1416
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
+D + L++TD NP I M+ +T + + P L +D T VYF D
Sbjct: 1417 MDVDIRRQMLYFTDE-YNPVIYEHDME--RNTTHVLYNVGHPEHLAVDWITGNVYFYDRS 1473
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
+ ++ ++ R+L S S +A+
Sbjct: 1474 -----------EPSIKLCSVQRQLC--------------------SRIITFASQVFVKAV 1502
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 378
+D N +L+YS + FW + I R MDG N+ +I+ + L +D
Sbjct: 1503 VVDPVNRILFYSLMH-----FWIFQVPHSIIYRADMDGQNQ-LVITKDVSHVTSLQVDTE 1556
Query: 379 TRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ +Y AD I+ +Y+G + VI
Sbjct: 1557 NKLLYIADISSRTINALDYEGKKLRTVI 1584
>gi|2344803|dbj|BAA21825.1| ApoER2delta4-7 [Homo sapiens]
Length = 793
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 155/303 (51%), Gaps = 48/303 (15%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCD--LAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+ +CV + CDG+ DC GADE GC L EC H G CS+ C +G CTCP G
Sbjct: 137 TSHKCVPASWRCDGEKDCEGGADEA-GCATWLNECLHNNGGCSHICTDLKIGFECTCPAG 195
Query: 59 EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL 118
L D TC D++EC+ P CSQ+C N KG + C C GY ++ CKA + L
Sbjct: 196 FQLL-DQKTCGDIDECKDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAGGKSPSL 254
Query: 119 IISNRHSILVADL-----------------------------------------EEKGKD 137
I +NR+ + DL +K D
Sbjct: 255 IFTNRYEVRRIDLVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASD 314
Query: 138 HRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ Q++++ L EGLA DW+ HIYW DS I V +G R L N+++PR
Sbjct: 315 PKEQEVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRRTLFSRNLSEPRA 374
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ +DP G +++W+DWG+ +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ D
Sbjct: 375 IAVDPLRG--FMYWSDWGDQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVD 432
Query: 257 SKL 259
SKL
Sbjct: 433 SKL 435
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 170/417 (40%), Gaps = 75/417 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHP-TPLGALCTCPPGEIL 61
C++ CDG+ +CP+G+DE C C + C T H P C
Sbjct: 97 HCIHERWKCDGEEECPDGSDESEATCTKQVCPAEKLSCGPTSHKCVPASWRCDGEKDCEG 156
Query: 62 SNDSVTCQD-MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SA 115
D C +NEC G CS +CT+ K + C+C G+ L D TC I+ A
Sbjct: 157 GADEAGCATWLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGDIDECKDPDA 215
Query: 116 AFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEV 175
I N + + D++ G + I + Y + RI++
Sbjct: 216 CSQICVNYKGYFKCECYPGYE----MDLLTKNCKAAGGKSPSLIFTNRY----EVRRIDL 267
Query: 176 CDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RST 231
N + I + K+ + LD T ++W D +I MD ++ +
Sbjct: 268 VKRNYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPKEQEV 320
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+I +++ P GL +D + + +YW D G
Sbjct: 321 LIDEQLHSPEGLAVDW------------------------------VHKHIYWTDSGNK- 349
Query: 292 VPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
I A +DG L S L E A+A+D G +Y W+DWG+ +I
Sbjct: 350 ---TISVATVDGGRRRTLFSRNLSEPRAIAVDPLRGFMY-----------WSDWGDQAKI 395
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
E+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL + ++ G R+ +I
Sbjct: 396 EKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTLI 452
>gi|405964329|gb|EKC29826.1| Low-density lipoprotein receptor-related protein 4 [Crassostrea
gigas]
Length = 2228
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 174/365 (47%), Gaps = 61/365 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD---LAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
+C+ K CDG DC + +DE GCD C G C C C+C G
Sbjct: 705 QCIGNQKKCDGVGDCEDQSDE-RGCDSTGKTSCTLGNGGCDQICEMKQTSVHCSCHQGYQ 763
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
L D CQD++EC+ G CSQ CTNT+GSY CSC GY L+ D CKA A+LI
Sbjct: 764 LLGDWRRCQDIDECQWEGSCSQRCTNTQGSYNCSCVPGYQLKTDGRGCKA-EGGKAYLIF 822
Query: 121 SNR------------HSILVADLEEK--------------------------GKDHRAQD 142
+NR H ++ LE +A+
Sbjct: 823 ANRVDIRRVLTDNAEHDSILQGLENAIALDFHLRDGHVYWSDVALDKIMRAFFNGSKAEP 882
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDEN-GTNRIVLAKDNITQPRGMMLDP 201
+V GL+ GLA DW+ ++W DS + IEV D R VL DN+ +PR ++ P
Sbjct: 883 VVEYGLESPGGLALDWVHNKLFWTDSGTSVIEVMDLGIHRYRKVLIWDNMEKPRAIVAHP 942
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G LFWTDWG+ P+IER MDGS R I ST ++WPNGLTLD AT ++Y+AD+K
Sbjct: 943 RHGM--LFWTDWGQVPKIERSYMDGSRRVVITSTSLFWPNGLTLDYATDKLYWADAKHHV 1000
Query: 262 IDCKSLE-------IKTNVNYS---TIFR-KLYWIDEGGNGVPLKIGKANMDGSNASILV 310
I+C +L+ I T + + T+F +LYW D I KAN N V
Sbjct: 1001 IECANLDGSFRRTVINTGLPHPFALTLFEDELYWTDWHTKS----INKANKFTGNDVETV 1056
Query: 311 SGQLY 315
+LY
Sbjct: 1057 YNRLY 1061
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 193/455 (42%), Gaps = 91/455 (20%)
Query: 19 PNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPG 78
P E P C G CS+ C P+ +G C CP G+ L +D
Sbjct: 1071 PQRQPESPN----RCGQTNGGCSHLCLPSVVGFTCACPSGQHLLSDG------------- 1113
Query: 79 YCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK---- 134
CTN +++ + + ++HS + + +++ ++ D + +
Sbjct: 1114 ---HNCTNDMATFLLYSTSSELRRMNMDPAVGVDHSDSIIPLTSVGHVIGLDFDAEEDYV 1170
Query: 135 ----------------GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDE 178
G R +V S L + G+A DW+G +YW D+ L+ IEV +
Sbjct: 1171 YYTDTSHKTISRAKWDGTQERV--LVNSRLIVPAGIAVDWVGRKLYWTDAELDVIEVSNL 1228
Query: 179 NGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY 238
NG+ R VL + QPR +++DP G ++FWTDWG+ P+IE+IGMDG +R II + +
Sbjct: 1229 NGSMRTVLVWKGMDQPRDIIVDPETG--YMFWTDWGKKPKIEKIGMDGKSRKVIIRSGLK 1286
Query: 239 WPNGLTLDIATRRVYFADSKLDFIDCK-----------SLEIKTNVNYSTIFRKLYWID- 286
WPNGL LDI T +Y+ D+ I+C S+E+++ + K+YW D
Sbjct: 1287 WPNGLALDIETETLYWTDAGTSRIECSTVDGHNRKVLISVEVQSPFGLTVYKDKIYWTDR 1346
Query: 287 --------EGGNGVPLKIGKANMDG---------------SNASILVSGQLYEALALDLE 323
+ NG +++ K N ++ S+ G + L L
Sbjct: 1347 REKGLYSADKTNGSHIEVLKTNYADIWDVMMFHKNRPEVHTDCSVNNGGCSHLCLVAPLP 1406
Query: 324 NG---------MLYYSTLKCTRWL-FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
G +L C + + + I ++ +D + ++ N +
Sbjct: 1407 QGHSCACPSGVLLKKDDRTCNSEMNNFLIFARRTDIRKVSLDVEYFADVVMPVRQLRNVI 1466
Query: 374 TLDIAT--RRVYFADSKLDFIDFCNYDGTGRQQVI 406
LD+ T R+VY+ D+ LD I N DG+ +++I
Sbjct: 1467 ALDVDTINRKVYWTDTVLDKIMRANLDGSQEEEII 1501
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 158/344 (45%), Gaps = 62/344 (18%)
Query: 30 LAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE----CEQPGYCSQMCT 85
+ C+ K G CS+ C P P G C CP G L D CQ + E G +
Sbjct: 1694 MDRCQKKNGGCSHLCLPNPTGYSCVCPTGLKLQEDGKQCQKVPEKFLLFASRGSVRWISM 1753
Query: 86 NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII--SNRHSILVADLEEKGKDHRAQDI 143
+T + + ++ D H A+++ A I ++ H ++ G + + I
Sbjct: 1754 DTNDTV-----DVFLPLKDLHNVIALDYDNAEKKIYYTDVHQDVIKRANFDGSESKV--I 1806
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
V S L+ +GLA DWIG ++YW D+ +RIEV +G R + + + +PR + L P
Sbjct: 1807 VSSNLETTDGLAVDWIGRNLYWTDTGRDRIEVAKLDGRYRKTIINERLDEPRAITLYPEK 1866
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G W+FWTDWG P+IE+ MDG+NR I++T + +PNGL +D +R+Y+ D+KLD
Sbjct: 1867 G--WMFWTDWGNKPKIEKSYMDGTNRKVIVNTGLGFPNGLCIDYEMQRLYWVDAKLD--- 1921
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
KI ++ +G + ++L++ ++
Sbjct: 1922 -------------------------------KIETSDFNGEHRAVLINDIIHPF------ 1944
Query: 324 NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 367
G+ Y +++WTDW + RIE+ + TII +
Sbjct: 1945 -GLAVYE-----EYIYWTDW-QTERIEKASKRTGLQRTIIQQSL 1981
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 200/475 (42%), Gaps = 80/475 (16%)
Query: 31 AECKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTC-QDMNECEQPGYCSQMCTNT 87
+C G CS+ C P P G C CP G +L D TC +MN +
Sbjct: 1387 TDCSVNNGGCSHLCLVAPLPQGHSCACPSGVLLKKDDRTCNSEMNN-------FLIFARR 1439
Query: 88 KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH-----SILVADLEEKGKDHRAQD 142
S + Y + + N A + NR ++L + + ++
Sbjct: 1440 TDIRKVSLDVEYFADVVMPVRQLRNVIALDVDTINRKVYWTDTVLDKIMRANLDGSQEEE 1499
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ +GLD +GL D +G IYW D+ LNRIEV D G+ R VL N+ +PR ++L
Sbjct: 1500 IISNGLDTPDGLVVDSVGQKIYWTDTGLNRIEVADVKGSMRKVLFWKNLDKPRAIVLVYE 1559
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L++TDWG+NPRIER MDG NR +I + WPNGL +D TRR+ +AD++++ I
Sbjct: 1560 YG--YLYFTDWGKNPRIERAWMDGQNRKVLIDRDLGWPNGLVIDKPTRRMIWADARMEII 1617
Query: 263 DCKSLE----------IKTNVNYSTIFRKLYWID------------EGGNGVPLKIGKAN 300
L+ +K + +YW D GG+ L+ +
Sbjct: 1618 GSSDLDGSNRKVLLKGVKHPYGLTVFGNDMYWTDWQKMSIMKANKFSGGDVKTLRYNLSG 1677
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTL---------------------KCT---- 335
+ +A L SG L + +NG + L +C
Sbjct: 1678 LMDIHAVQLDSGGLEKMDRCQKKNGGCSHLCLPNPTGYSCVCPTGLKLQEDGKQCQKVPE 1737
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI--ATRRVYFADSKLDFID 393
++L + G + I MD ++ + N + LD A +++Y+ D D I
Sbjct: 1738 KFLLFASRGS---VRWISMDTNDTVDVFLPLKDLHNVIALDYDNAEKKIYYTDVHQDVIK 1794
Query: 394 FCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKT 448
N+DG+ + +++ +E T+ LA+D LY++ G + ++
Sbjct: 1795 RANFDGS--ESKVIVSSNLETTD---------GLAVDWIGRNLYWTDTGRDRIEV 1838
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 143/347 (41%), Gaps = 97/347 (27%)
Query: 72 NECEQP-GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C Q G CS +C + + C+C G L D H C N A FL+ S + +
Sbjct: 1079 NRCGQTNGGCSHLCLPSVVGFTCACPSGQHLLSDGHNC--TNDMATFLLYSTSSELRRMN 1136
Query: 131 LEEK-GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
++ G DH I ++ + V GL +D ++Y+ D+
Sbjct: 1137 MDPAVGVDHSDSIIPLTSVGHVIGLDFDAEEDYVYYTDT--------------------- 1175
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
+ I R DG+ ++++++ P G+ +D
Sbjct: 1176 -------------------------SHKTISRAKWDGTQERVLVNSRLIVPAGIAVDWVG 1210
Query: 250 RRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL 309
R++Y+ D++LD I+ +N++GS ++L
Sbjct: 1211 RKLYWTDAELDVIEV----------------------------------SNLNGSMRTVL 1236
Query: 310 VSGQLYEA--LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 367
V + + + +D E G ++FWTDWG+ P+IE+IGMDG +R II + +
Sbjct: 1237 VWKGMDQPRDIIVDPETG-----------YMFWTDWGKKPKIEKIGMDGKSRKVIIRSGL 1285
Query: 368 YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
WPNGL LDI T +Y+ D+ I+ DG R+ +I +++ F
Sbjct: 1286 KWPNGLALDIETETLYWTDAGTSRIECSTVDGHNRKVLISVEVQSPF 1332
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 148/359 (41%), Gaps = 71/359 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ +K CDG DCP+ +DE C + C+ A C G+ +S
Sbjct: 325 CIAKSKRCDGNYDCPDNSDE------RNCTYNDTKCNG-------AASFQCGNGKCISV- 370
Query: 65 SVTCQDMNEC----EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
+ C M+ C ++ + + + EY + + I + A
Sbjct: 371 PIVCNGMDNCGDGTDETDCVDEDVLVFARRHAINLMSLSSFEYHSVPVQGIKSAIAVDFD 430
Query: 121 SNRHSILVADLEEKG-----KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEV 175
I D E++ D + ++ G+ +G+A D + +YW D+ IEV
Sbjct: 431 PVEKQIYWTDNEQQFISRSYLDGTGLENLILGVPRPDGIAIDAVNRKLYWTDTGKKEIEV 490
Query: 176 CDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST 235
D +G NR + D++ +PR + +D + ++W DWG NP+IER +DGS R T+++T
Sbjct: 491 SDLDGRNRKAIVTDHLYEPRDIAVDVK--NKKIYWCDWGINPKIERANLDGSWRETLVNT 548
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
+ WPNG+ LD+ ++ +Y+ D++ I+
Sbjct: 549 SLGWPNGIALDVKSQTIYWGDAQKSCIE-------------------------------- 576
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+AN DGSN + ++ + L L LY W+DW + IER+ +
Sbjct: 577 --RANTDGSNRTTFLNADVPHIFGLSLLGDYLY-----------WSDW-QKRTIERVNI 621
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 49/228 (21%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D P + ++WTD E I R +DG+ +I + P+G+ +D
Sbjct: 424 AIAVDFDPVEKQIYWTD-NEQQFISRSYLDGTGLENLI-LGVPRPDGIAID--------- 472
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ RKLYW D G + + +++DG N +V+ LY
Sbjct: 473 ---------------------AVNRKLYWTDTGKKEIEV----SDLDGRNRKAIVTDHLY 507
Query: 316 EA--LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
E +A+D++N +Y W DWG NP+IER +DGS R T+++T + WPNG+
Sbjct: 508 EPRDIAVDVKNKKIY-----------WCDWGINPKIERANLDGSWRETLVNTSLGWPNGI 556
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
LD+ ++ +Y+ D++ I+ N DG+ R + D+ F L+GD
Sbjct: 557 ALDVKSQTIYWGDAQKSCIERANTDGSNRTTFLNADVPHIFGLSLLGD 604
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 147/354 (41%), Gaps = 99/354 (27%)
Query: 64 DSVTCQDMNECEQP-GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
DS + M+ C++ G CS +C Y C C G L+ D C+ + FL+ ++
Sbjct: 1687 DSGGLEKMDRCQKKNGGCSHLCLPNPTGYSCVCPTGLKLQEDGKQCQKV--PEKFLLFAS 1744
Query: 123 RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
R G + W+ D N T
Sbjct: 1745 R-------------------------------------GSVRWISM--------DTNDTV 1759
Query: 183 RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 242
+ L ++ + LD + +++TD ++ I+R DGS I+S+ + +G
Sbjct: 1760 DVFLPLKDLHNV--IALDYDNAEKKIYYTDVHQDV-IKRANFDGSESKVIVSSNLETTDG 1816
Query: 243 LTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMD 302
L +D I R LYW D G + +I A +D
Sbjct: 1817 LAVDW------------------------------IGRNLYWTDTGRD----RIEVAKLD 1842
Query: 303 GSNASILVSGQLYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
G +++ +L E A+ L E G W+FWTDWG P+IE+ MDG+NR
Sbjct: 1843 GRYRKTIINERLDEPRAITLYPEKG-----------WMFWTDWGNKPKIEKSYMDGTNRK 1891
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
I++T + +PNGL +D +R+Y+ D+KLD I+ +++G R V++ D++ F
Sbjct: 1892 VIVNTGLGFPNGLCIDYEMQRLYWVDAKLDKIETSDFNGEHR-AVLINDIIHPF 1944
>gi|387604226|gb|AFJ93121.1| low density lipoprotein receptor-related protein 8 transcript
variant 2 [Anas platyrhynchos]
Length = 876
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 157/304 (51%), Gaps = 49/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ K CD DCP+ +DE GC + EC G CS+ C +G C CPPG L
Sbjct: 285 CIHGAKQCDKVHDCPDNSDEA-GCVQGINECSMNNGGCSHICKDLKIGYECECPPGYKLL 343
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG Y C C EGY ++ + CKA+ S +LI +N
Sbjct: 344 -DKKTCGDIDECENPDACSQICINYKGDYKCECYEGYEMDTLSKNCKAVGKS-PYLIFTN 401
Query: 123 RHSILVADLE-----------------------------------------EKGKDHRAQ 141
RH + DL +K D Q
Sbjct: 402 RHEVRKIDLVKRDYSRIIPMLKNVVALDVEVATNRIYWCDLFYRKIYSAYIDKASDTAEQ 461
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
I++ S L+ EGLA DW+ +IYW DS I V +G+ R L ++++PR + +D
Sbjct: 462 VILIDSQLNSPEGLAIDWVHKNIYWTDSGNKTISVATADGSRRRTLFNRDLSEPRAIAVD 521
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ R+++W+DWG+ +IE+ G++G R +++ I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 522 PT--RRFMYWSDWGDKAKIEKAGLNGVGRRVLVADNIEWPNGITLDLLNQRLYWVDSKLH 579
Query: 261 FIDC 264
+ C
Sbjct: 580 SLSC 583
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 183/446 (41%), Gaps = 73/446 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTC--HPTPLGALCTCPPGEI 60
C++L CDG DC + +DE C L C+ +F TC + CP
Sbjct: 245 ECIHLNWKCDGDEDCKDKSDEQ-DCPLVTCRPDEFQCGDGTCIHGAKQCDKVHDCPDN-- 301
Query: 61 LSNDSVTCQDMNECE-QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI 119
S+++ Q +NEC G CS +C + K Y C C GY L D TC I+
Sbjct: 302 -SDEAGCVQGINECSMNNGGCSHICKDLKIGYECECPPGYKL-LDKKTCGDIDECENPDA 359
Query: 120 ISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDEN 179
S D + + + D + V Y I+ + +I++ +
Sbjct: 360 CSQICINYKGDYKCECYEGYEMDTLSKNCKAVGKSPY-----LIFTNRHEVRKIDLVKRD 414
Query: 180 GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE----NPRIERIGMDGSNRSTIIST 235
+ I + K+ + LD T ++W D + I++ D + + +I +
Sbjct: 415 YSRIIPMLKNVVA------LDVEVATNRIYWCDLFYRKIYSAYIDK-ASDTAEQVILIDS 467
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
++ P GL +D + + +YW D G + +
Sbjct: 468 QLNSPEGLAIDW------------------------------VHKNIYWTDSGNKTISV- 496
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A DGS L + L E A+ ++ R+++W+DWG+ +IE+ G++
Sbjct: 497 ---ATADGSRRRTLFNRDLSEPRAIAVDPTR---------RFMYWSDWGDKAKIEKAGLN 544
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI--LIDLMVE 413
G R +++ I WPNG+TLD+ +R+Y+ DSKL + +++G+ R+ +I + DL
Sbjct: 545 GVGRRVLVADNIEWPNGITLDLLNQRLYWVDSKLHSLSCIDFNGSNRKVLISSVDDLSHP 604
Query: 414 FTNDLMGDNGVPALALDLENGMLYYS 439
F + D DLEN ++ +
Sbjct: 605 FGLAVFEDR---VFWTDLENEAIFSA 627
>gi|403258454|ref|XP_003921778.1| PREDICTED: low-density lipoprotein receptor-related protein 8
[Saimiri boliviensis boliviensis]
Length = 909
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 152/299 (50%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C G CTCP G L
Sbjct: 257 CVLAIKHCNHEQDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKNGFECTCPAGFQLL 315
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG + C C GY ++ CKA + LI +N
Sbjct: 316 -DKKTCGDIDECEDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAAGKSPSLIFTN 374
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D + Q
Sbjct: 375 RHEVRRIDLVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPKEQ 434
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++++ L EGLA DW+ HIYW DS I V +G R L N+++PR + +D
Sbjct: 435 EVLIDEQLHSPEGLAVDWVHRHIYWTDSGNKTISVATVDGGRRCTLFSHNLSEPRAIAVD 494
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 495 PLRG--FMYWSDWGYQAKIEKAGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 551
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 180/455 (39%), Gaps = 114/455 (25%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTC---------------- 44
+ +CV + CDG+ DC GADE GC H+F + +C
Sbjct: 179 ASHKCVPASWRCDGEKDCEGGADEA-GCAALCAPHEFQCGNRSCLAAVFVCDGDDDCGDG 237
Query: 45 HPTPLG-----------ALCT-----------CPPGEILSNDSVTCQDMNEC-EQPGYCS 81
PLG C CP G S+++ Q +NEC G CS
Sbjct: 238 SDEPLGTCRGDEFQCGDGTCVLAIKHCNHEQDCPDG---SDEAGCLQGLNECLHNNGGCS 294
Query: 82 QMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SAAFLIISNRHSILVADLEEKGKD 137
+CT+ K + C+C G+ L D TC I+ A I N + +
Sbjct: 295 HICTDLKNGFECTCPAGFQL-LDKKTCGDIDECEDPDACSQICVNYKGYFKCECYPGYE- 352
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
D++ G + I + + + RI++ N + I + K+ +
Sbjct: 353 ---MDLLTKNCKAAAGKSPSLIFTNRH----EVRRIDLVKRNYSRLIPMLKNVVA----- 400
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RSTIISTKIYWPNGLTLDIATRRVY 253
LD T ++W D +I MD ++ + +I +++ P GL +D
Sbjct: 401 -LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPKEQEVLIDEQLHSPEGLAVDW------ 452
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+ R +YW D G I A +DG L S
Sbjct: 453 ------------------------VHRHIYWTDSGNK----TISVATVDGGRRCTLFSHN 484
Query: 314 LYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
L E A+A+D G +Y W+DWG +IE+ G++G +R T++S I WPN
Sbjct: 485 LSEPRAIAVDPLRGFMY-----------WSDWGYQAKIEKAGLNGVDRQTLVSDNIEWPN 533
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
G+TLD+ ++R+Y+ DSKL + ++ G R+++I
Sbjct: 534 GITLDLLSQRLYWVDSKLHQLSSVDFSGGNRKRLI 568
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN--RIVLAKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D +G N R++ + D ++ P G+
Sbjct: 522 QTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSVDFSGGNRKRLISSTDFLSHPFGIA 581
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 582 V----FEDKVFWTD 591
>gi|432866249|ref|XP_004070758.1| PREDICTED: low-density lipoprotein receptor-related protein 1-like
[Oryzias latipes]
Length = 4548
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/405 (31%), Positives = 193/405 (47%), Gaps = 92/405 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+N T +CD DC +G+DE C + EC K C+ C +G C C PG L
Sbjct: 2910 KCLNETLLCDRNDDCGDGSDEF-NCFINECLNSKLSGCTQLCDDLKIGFKCRCHPGFQLK 2968
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
D TC D++EC CSQ C NT GS+ C C +G+ L ++ T CK+ + +LI +
Sbjct: 2969 RDGKTCVDIDECTTTYPCSQHCLNTHGSFHCLCVDGFELSPNDPTFCKSTSDVEPYLIFA 3028
Query: 122 NRHSILVADLE-------EKGKD-------HRAQDIVV---------------------- 145
NR+ + +L+ ++G + H A+ ++
Sbjct: 3029 NRYYLRKLNLDGSNYTLIKQGLNNAVALDFHYAEQMIYWTDVTTQGSMIRRMHMNGSNME 3088
Query: 146 ----SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+ L +GLA DW+GG++YW D + IEV NG R VL + +PR + +D
Sbjct: 3089 VLHRTSLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAFRTVLVNSGLKEPRAVAVDV 3148
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+W+DWG+NP I RIGMDG+NRS I+ KI WPNGLTLD R+Y+AD++ D+
Sbjct: 3149 RYG--YLYWSDWGDNPHIGRIGMDGTNRSVIVKDKITWPNGLTLDFINDRIYWADAREDY 3206
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGS+ +++ + A+
Sbjct: 3207 IE----------------------------------FASLDGSSRHTVLNQDIPHIFAMT 3232
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD-GSNRSTIIST 365
L +++WTDW E I R G+N++T+IST
Sbjct: 3233 LFE-----------EYIYWTDW-ETKSINRAHKTLGTNKTTLIST 3265
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 163/330 (49%), Gaps = 55/330 (16%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
D C++++K+CDG DC +G DEGP C C C T G C C G ++
Sbjct: 90 DVCIHMSKLCDGVPDCSDGWDEGPHCREKAPDCDSLGCQFKCAVTHDGPRCYCRHGYEVA 149
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLI 119
D TC+D NEC G CSQ C+NT GSY CSC EGY+L+ DN +CKA N L+
Sbjct: 150 ADGKTCKDFNECSVYGTCSQTCSNTDGSYTCSCVEGYLLQPDNRSCKAKNEPVDRLPVLL 209
Query: 120 ISNRHSILVADLEEK--------GKDHRAQDIVVS------------------------- 146
I+N H I L K A D + +
Sbjct: 210 IANLHDIRCTSLSGSTSRFPSIPTKQTMAMDFIYAEETVCWIDVGDAPTSTQLKCASLQD 269
Query: 147 --------------GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
L VE +A DW+ G+ Y++D +R+ VC ++G + L ++
Sbjct: 270 LKGFSNIRTINITLSLHHVEQMAIDWLTGNFYFVDDVDDRVFVCSKSGQICVTLLDQDLY 329
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP+ G +F+TD+G PR+ER MDG NR+ ++ TKI +P+G+TLD+ R V
Sbjct: 330 NPKGIALDPAMGK--VFFTDYGSTPRVERCDMDGQNRTKLVDTKIVFPHGITLDLVNRLV 387
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
Y+AD+ LD+I+ E K N TI + L
Sbjct: 388 YWADAYLDYIEVVDYEGK---NRHTIIQGL 414
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 149/304 (49%), Gaps = 51/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DCP+ +DE CDL C G CS+ C P G +C+CP G L
Sbjct: 1160 CLPAEKLCDGINDCPDSSDE-KFCDL--CSLDNGGCSHNCSIIPGEGHMCSCPLGMELGA 1216
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K + CSC EG+ LE + +CK+ N F+I SNR
Sbjct: 1217 DNKTCQIQSFCAKHLKCSQKCEQDKFNVKCSCYEGWELEPNMESCKSTNPFKPFIIFSNR 1276
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1277 HEIRRIDLHKGEFTVLVPGLRNTIALDFHLNQSTLYWTDVVEDKIYRGKLSDNGALTSFE 1336
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L + PR + LDP
Sbjct: 1337 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMRTTLLAGEVEHPRAIALDP 1396
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIY--WPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G R TI WPNGLT+D RR+ + D++
Sbjct: 1397 RDGI--LFWTDWDASLPRIEAASMSGEGRRTIHKETGSGGWPNGLTVDYMERRIVWIDAR 1454
Query: 259 LDFI 262
D I
Sbjct: 1455 SDAI 1458
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 193/438 (44%), Gaps = 93/438 (21%)
Query: 4 RCVNLTK-VCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+N K VCDG+ DC + +DE A C H C+ + G C +L
Sbjct: 2868 RCLNQKKWVCDGEFDCQDRSDE------ARCTHTERKCNESAFMCRNGK---CLNETLLC 2918
Query: 63 NDSVTCQD--------MNEC--EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN 112
+ + C D +NEC + C+Q+C + K + C C+ G+ L+ D TC I+
Sbjct: 2919 DRNDDCGDGSDEFNCFINECLNSKLSGCTQLCDDLKIGFKCRCHPGFQLKRDGKTCVDID 2978
Query: 113 HSAAFLIISNR--------HSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIY 164
S H + V E D S D+ L + + Y
Sbjct: 2979 ECTTTYPCSQHCLNTHGSFHCLCVDGFELSPND---PTFCKSTSDVEPYLIF----ANRY 3031
Query: 165 WLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD-WGENPRIERIG 223
+L +LN +G+N L K + + LD + ++WTD + I R+
Sbjct: 3032 YL-RKLNL------DGSN-YTLIKQGLNN--AVALDFHYAEQMIYWTDVTTQGSMIRRMH 3081
Query: 224 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLY 283
M+GSN + T + P+GL +D + LY
Sbjct: 3082 MNGSNMEVLHRTSLSNPDGLAVDW------------------------------VGGNLY 3111
Query: 284 WIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWT 341
W D+G + + + + ++G+ ++LV+ L E A+A+D+ G LY W+
Sbjct: 3112 WCDKGRDTIEV----SKLNGAFRTVLVNSGLKEPRAVAVDVRYGYLY-----------WS 3156
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
DWG+NP I RIGMDG+NRS I+ KI WPNGLTLD R+Y+AD++ D+I+F + DG+
Sbjct: 3157 DWGDNPHIGRIGMDGTNRSVIVKDKITWPNGLTLDFINDRIYWADAREDYIEFASLDGSS 3216
Query: 402 RQQVILIDLMVEFTNDLM 419
R V+ D+ F L
Sbjct: 3217 RHTVLNQDIPHIFAMTLF 3234
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 143/327 (43%), Gaps = 73/327 (22%)
Query: 4 RCVNLTKVCDGKTDCPN-GADE---GPGCDLAECKHKFGLCSN----TCHPTPLGALCTC 55
RC++ T C+ DC + G+DE L +C++ C + C + C+C
Sbjct: 3746 RCISSTLRCNFFNDCEDYGSDEINCKTDTKLNDCRNNRTQCGDGDEAHCVTNGTDSFCSC 3805
Query: 56 PPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA 115
PG TC D+NEC + G CS +C NTKGSY CSC++ + N TCKA +++
Sbjct: 3806 KPG-FQKIGHRTCGDVNECLEFGVCSHICNNTKGSYKCSCHKHFTKM--NDTCKADSNTQ 3862
Query: 116 AFL--------------------------------------IISNR------HSILVADL 131
L I +NR H+ ++
Sbjct: 3863 QVLYIADDNEIRSLDPGMPHWRYEQTFQGDASVRIDAMDLHIKTNRIFWTSWHTRQISSY 3922
Query: 132 EEKG----------------KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEV 175
E G + R ++ + GL + G+A DW+ ++YW DS + IEV
Sbjct: 3923 ELPGTSSSSISSNSHRNRRLSEGRVTNLQIEGLKMPRGIAVDWVANNLYWTDSGRDVIEV 3982
Query: 176 CDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST 235
+G L I +P +++DP R ++W DWG +P+IE MDG+ R ++
Sbjct: 3983 AQLSGQFCKTLISRMIDEPHAIVVDPQ--RRTMYWADWGNHPKIETAAMDGTLRQILVFE 4040
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFI 262
I WP GL +D R+Y++D+KL I
Sbjct: 4041 NIQWPTGLAVDHFNERLYWSDAKLSVI 4067
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 111/237 (46%), Gaps = 47/237 (19%)
Query: 78 GYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T S C C GY L+ +C+ + +FL+ S I L+ K
Sbjct: 1853 GDCSQLCLPTSPSTRACMCTAGYSLKSGEQSCEGM---GSFLLYSVHEGIRGIPLDPADK 1909
Query: 137 ----------------DHRAQ-------------------------DIVVSGLDLVEGLA 155
D A+ D+V +G+ VEG+
Sbjct: 1910 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIT 1969
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1970 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPVKG--YLFWTEWGQ 2027
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN 272
PRIER +DGS R +++ I WPNG+++D +Y+ D++ D I+ +LE N
Sbjct: 2028 YPRIERSRLDGSQRLILVNVSISWPNGISIDYEEGLLYWCDARTDKIERINLETGEN 2084
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C +N+ + C CN G+ L D +CK +H FL+
Sbjct: 491 KPGGCSDICLLSNSHKTRTCRCNSGFSLGSDGKSCKKPDHEL-FLVYGKGRPGVIRGMDM 549
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + + I + +L +K D + I+ G+
Sbjct: 550 NAKVPDEYMIPIENLMNPRALDFHAASEYIYFADATSYIIGRQKIHDREREIILKEGIHT 609
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEGLA DW+GG++YW D + + ++ R L + ++ PR +++DP G W
Sbjct: 610 VEGLAVDWMGGNLYWTDDGPKKTISVARLEKASQTRKTLIEGKMSHPRAIVVDPGHG--W 667
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P +I++ MDGS+ ++ K + WPNGL+LDI +Y+ D+ D
Sbjct: 668 MYWTDWEEDPTESNRGKIKKAWMDGSHHQVFLTGKTMLWPNGLSLDIPQGILYWVDAYYD 727
Query: 261 FID 263
I+
Sbjct: 728 QIE 730
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
+F+TD+G PR+ER MDG NR+ ++ TKI +P+G+TLD+ R VY+AD+ LD+I+ +Y
Sbjct: 343 VFFTDYGSTPRVERCDMDGQNRTKLVDTKIVFPHGITLDLVNRLVYWADAYLDYIEVVDY 402
Query: 398 DGTGRQQVILIDLMVEFTNDL 418
+G R +I L +E N L
Sbjct: 403 EGKNRHTIIQ-GLQIEHLNGL 422
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 135/332 (40%), Gaps = 58/332 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N ++ C+C L+ D TCK S FL+ + + I D++
Sbjct: 1547 GPCSHLCLINFNQTFSCACPHLMKLQPDKRTCK---ESRKFLLYARQIEIRGVDIDNPYY 1603
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V + YD + IYW D R I+ NGT + ++ G
Sbjct: 1604 NYIIS-FTVPDIDNVTAVDYDAVEHRIYWSDVRTQTIKRAFINGTGVETVVSADLPNAHG 1662
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++
Sbjct: 1663 LAVDWV--SRNLFWTSYDANKKQINVARLDGSFKNAVV---------------------- 1698
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ L+ + + KLYW D G N I ANMDG+N ++L + Q
Sbjct: 1699 ---------QGLDKPHCLVVHPLLGKLYWTD-GDN-----ISIANMDGNNHTLLFTNQKG 1743
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
L++D E G LY W G N I R +DGSN + K T
Sbjct: 1744 PVGLSIDYEKGHLY-----------WISSG-NSTINRCQLDGSNLEILEGAKGKLIKATT 1791
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
L I ++++AD D I C+ G+ +V+
Sbjct: 1792 LAIMGDKLWWADQGTDQIGTCDKKDGGQWKVL 1823
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 94/234 (40%), Gaps = 59/234 (25%)
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD---SRLNRIE 174
+ S+ H + + + G D + IVV + VEGLAY +YW S + R
Sbjct: 2252 IFFSDIHFGNIQQINDDGTDRK---IVVDNVGSVEGLAYHRGWDTLYWTSYTTSTITRHT 2308
Query: 175 VCDENGT---NR-IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN-PRIERIGMDGSNR 229
V D++ T NR V+ PR +LD +FWT+W E P I R ++G+N
Sbjct: 2309 V-DQSRTVAYNRNTVVTMSGEDHPRAFVLDEC--QDLMFWTNWNEQAPSIMRASLNGANV 2365
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
I+ + I PNGL +D ++YF+D+ LD
Sbjct: 2366 LAIVGSNIKTPNGLAIDHRAEKIYFSDATLD----------------------------- 2396
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
KI + DGSN +L+ + L + ++FWTDW
Sbjct: 2397 -----KIERCEYDGSNRYVLLKNEPVHPFGLSVYGD-----------YIFWTDW 2434
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 333 KCTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E P I R ++G+N I+ + I PNGL +D ++YF+D+ LD
Sbjct: 2338 ECQDLMFWTNWNEQAPSIMRASLNGANVLAIVGSNIKTPNGLAIDHRAEKIYFSDATLDK 2397
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
I+ C YDG+ R ++ + + F + GD
Sbjct: 2398 IERCEYDGSNRYVLLKNEPVHPFGLSVYGD 2427
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 129/350 (36%), Gaps = 91/350 (26%)
Query: 121 SNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG 180
+N+ I VA L D ++ VV GLD L + G +YW D + I + + +G
Sbjct: 1679 ANKKQINVARL-----DGSFKNAVVQGLDKPHCLVVHPLLGKLYWTDG--DNISIANMDG 1731
Query: 181 TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS---------- 230
N +L N P G+ +D G L+W G N I R +DGSN
Sbjct: 1732 NNHTLLFT-NQKGPVGLSIDYEKGH--LYWISSG-NSTINRCQLDGSNLEILEGAKGKLI 1787
Query: 231 -----TIISTKIYWPNGLTLDIAT---------------------RRVYFADSKLDFI-- 262
I+ K++W + T I T ++Y D + +
Sbjct: 1788 KATTLAIMGDKLWWADQGTDQIGTCDKKDGGQWKVLRNHTSPMMHMKIYDEDVQKTGVNL 1847
Query: 263 ------DCKSLEIKTN---------VNYSTIFRK----------LYWIDEGGNGVPLKIG 297
DC L + T+ YS + LY + EG G+PL
Sbjct: 1848 CSNNNGDCSQLCLPTSPSTRACMCTAGYSLKSGEQSCEGMGSFLLYSVHEGIRGIPLDPA 1907
Query: 298 KANMDGSNASILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG 356
D S+A + VSG L + EN +Y W D G + I R D
Sbjct: 1908 ----DKSDALVPVSGTSLAVGIDFHAENDTIY-----------WVDMGLS-TISRAKRDQ 1951
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ R +++ I G+T+D +Y+ D D I+ +G+ R VI
Sbjct: 1952 TWREDVVTNGIGRVEGITVDWIAGNIYWTDQGFDVIEVARLNGSFRYVVI 2001
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 123/318 (38%), Gaps = 58/318 (18%)
Query: 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDE-NGTNRIVLAKDNITQPRGMML-DPS--PGT 205
L A GG +YW D R N + ++ G N V+ + N TQP + + PS P
Sbjct: 1478 LAHPFAVTMYGGEVYWTDWRTNTLTKANKWTGHNVTVVQRTN-TQPFDLQVYHPSRQPEA 1536
Query: 206 RWLFWTDWGENP--RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
T G+ P + I + + P+ T + + + +A I+
Sbjct: 1537 PNPCATSDGKGPCSHLCLINFNQTFSCACPHLMKLQPDKRTCKESRKFLLYARQ----IE 1592
Query: 264 CKSLEIK------------------TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305
+ ++I T V+Y + ++YW D I +A ++G+
Sbjct: 1593 IRGVDIDNPYYNYIISFTVPDIDNVTAVDYDAVEHRIYWSDVRTQ----TIKRAFINGTG 1648
Query: 306 ASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR-IERIGMDGSNRSTIIS 364
+VS L A L ++ +R LFWT + N + I +DGS ++ ++
Sbjct: 1649 VETVVSADLPNAHGLAVD---------WVSRNLFWTSYDANKKQINVARLDGSFKNAVVQ 1699
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGV 424
+ P+ L + ++Y+ D D I N DG + FTN G
Sbjct: 1700 -GLDKPHCLVVHPLLGKLYWTDG--DNISIANMDGNNHTLL--------FTNQ----KGP 1744
Query: 425 PALALDLENGMLYYSTEG 442
L++D E G LY+ + G
Sbjct: 1745 VGLSIDYEKGHLYWISSG 1762
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 28/150 (18%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ ++LV G L +ALD L STL +WTD E+ +I R +
Sbjct: 1278 EIRRIDLHKGEFTVLVPG-LRNTIALDFH---LNQSTL------YWTDVVED-KIYRGKL 1326
Query: 355 DGSNRST----IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ T +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1327 SDNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMR-------- 1378
Query: 411 MVEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L G+ P A+ALD +G+L+++
Sbjct: 1379 ----TTLLAGEVEHPRAIALDPRDGILFWT 1404
>gi|126074|sp|P20063.1|LDLR_RABIT RecName: Full=Low-density lipoprotein receptor; Short=LDL receptor
gi|165456|gb|AAA31383.1| low density lipoprotein receptor precursor, partial [Oryctolagus
cuniculus]
Length = 837
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/301 (35%), Positives = 160/301 (53%), Gaps = 47/301 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++L KVC+ DC + +DE C EC G CS+TC +G C CP G L
Sbjct: 276 CISLDKVCNSARDCQDWSDEPIKECATNECMRGNGGCSHTCFDLRIGHECHCPKGYRLV- 334
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D C+D+NECE P CSQ+C N GSY C C G+ L+ + CKA++ S A+L +NR
Sbjct: 335 DQRRCEDINECEDPDICSQLCVNLAGSYKCECRAGFQLDPHSQACKAVD-SIAYLFFTNR 393
Query: 124 HSI------------LVADLE-------------------EKGKDHRAQ----------- 141
H + L+A+L+ + K + AQ
Sbjct: 394 HEVRKMTLDRSEYTSLIANLKNVVALDAEVASNRIYWSDLSQRKIYSAQIDGAHGFPAYD 453
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ S L +GLA DWI GHIYW DS L + V D G R L + ++PR +++DP
Sbjct: 454 TVISSDLQAPDGLAVDWIHGHIYWTDSVLGTVSVADTRGFRRKTLFRQEGSKPRAIVVDP 513
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
+ G +++WTDWG +IE+ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL
Sbjct: 514 AHG--FMYWTDWGVPAKIEKGGLNGVDVYSLVTEDIQWPNGITLDLSSGRLYWVDSKLHS 571
Query: 262 I 262
I
Sbjct: 572 I 572
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 171/474 (36%), Gaps = 106/474 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG---------------------CDLAECKHKFGLCSNT 43
CV CDG+ DC +G+DE P C EC H C
Sbjct: 147 CVPALWACDGEPDCDDGSDEWPARCGARPSPQPGRGPCSRHEFHCGSGECVHASWRCDGD 206
Query: 44 CHPTPLG-----ALCTCPPGEILSNDSVTCQDMNECEQPGYCSQM-----CTNT---KGS 90
A TC P E +D +C+Q C M C N +G
Sbjct: 207 ADCRDGSDERDCAAATCRPDEFQCSDGTCIHGSRQCDQQQDCGDMSDEVGCVNVTLCEGP 266
Query: 91 YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE----EKGKDHRAQDIVVS 146
C+ G + D K N + S+ A E G H +
Sbjct: 267 DKFKCHSGECISLD----KVCNSARDCQDWSDEPIKECATNECMRGNGGCSH-------T 315
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR---IVLAKDNITQPR-GMMLDPS 202
DL G G+ R I C++ + LA + R G LDP
Sbjct: 316 CFDLRIGHECHCPKGYRLVDQRRCEDINECEDPDICSQLCVNLAGSYKCECRAGFQLDPH 375
Query: 203 P-------GTRWLFWTDWGENPRIERIGMDGSNRSTII--------------STKIYWPN 241
+LF+T+ E + ++ +D S +++I S +IYW
Sbjct: 376 SQACKAVDSIAYLFFTNRHE---VRKMTLDRSEYTSLIANLKNVVALDAEVASNRIYWS- 431
Query: 242 GLTLDIATRRVYFAD-------SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
D++ R++Y A D + L+ + I +YW D V
Sbjct: 432 ----DLSQRKIYSAQIDGAHGFPAYDTVISSDLQAPDGLAVDWIHGHIYWTD----SVLG 483
Query: 295 KIGKANMDGSNASILV--SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+ A+ G L G A+ +D +G +Y WTDWG +IE+
Sbjct: 484 TVSVADTRGFRRKTLFRQEGSKPRAIVVDPAHGFMY-----------WTDWGVPAKIEKG 532
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL I + +G R+ V+
Sbjct: 533 GLNGVDVYSLVTEDIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNGGNRKTVL 586
>gi|417357133|gb|AFX60885.1| low density lipoprotein receptor [Oryctolagus cuniculus]
Length = 847
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/301 (35%), Positives = 160/301 (53%), Gaps = 47/301 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++L KVC+ DC + +DE C EC G CS+TC +G C CP G L
Sbjct: 286 CISLDKVCNSARDCQDWSDEPIKECATNECMRGNGGCSHTCFDLRIGHECHCPKGYRLV- 344
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D C+D+NECE P CSQ+C N GSY C C G+ L+ + CKA++ S A+L +NR
Sbjct: 345 DQRRCEDINECEDPDICSQLCVNLAGSYKCECRAGFQLDPHSQACKAVD-SIAYLFFTNR 403
Query: 124 HSI------------LVADLE-------------------EKGKDHRAQ----------- 141
H + L+A+L+ + K + AQ
Sbjct: 404 HEVRKMTLDRSEYTSLIANLKNVVALDAEVASNRIYWSDLSQRKIYSAQIDGAHGFPAYD 463
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ S L +GLA DWI GHIYW DS L + V D G R L + ++PR +++DP
Sbjct: 464 TVISSDLQAPDGLAVDWIHGHIYWTDSVLGTVSVADTRGFRRKTLFRQEGSKPRAIVVDP 523
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
+ G +++WTDWG +IE+ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL
Sbjct: 524 AHG--FMYWTDWGVPAKIEKGGLNGVDVYSLVTEDIQWPNGITLDLSSGRLYWVDSKLHS 581
Query: 262 I 262
I
Sbjct: 582 I 582
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 171/474 (36%), Gaps = 106/474 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG---------------------CDLAECKHKFGLCSNT 43
CV CDG+ DC +G+DE P C EC H C
Sbjct: 157 CVPALWACDGEPDCDDGSDEWPARCGARPSPQPGRGPCSRHEFHCGSGECVHASWRCDGD 216
Query: 44 CHPTPLG-----ALCTCPPGEILSNDSVTCQDMNECEQPGYCSQM-----CTNT---KGS 90
A TC P E +D +C+Q C M C N +G
Sbjct: 217 ADCRDGSDERDCAAATCRPDEFQCSDGTCIHGSRQCDQQQDCGDMSDEVGCVNVTLCEGP 276
Query: 91 YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE----EKGKDHRAQDIVVS 146
C+ G + D K N + S+ A E G H +
Sbjct: 277 DKFKCHSGECISLD----KVCNSARDCQDWSDEPIKECATNECMRGNGGCSH-------T 325
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR---IVLAKDNITQPR-GMMLDPS 202
DL G G+ R I C++ + LA + R G LDP
Sbjct: 326 CFDLRIGHECHCPKGYRLVDQRRCEDINECEDPDICSQLCVNLAGSYKCECRAGFQLDPH 385
Query: 203 P-------GTRWLFWTDWGENPRIERIGMDGSNRSTII--------------STKIYWPN 241
+LF+T+ E + ++ +D S +++I S +IYW
Sbjct: 386 SQACKAVDSIAYLFFTNRHE---VRKMTLDRSEYTSLIANLKNVVALDAEVASNRIYWS- 441
Query: 242 GLTLDIATRRVYFAD-------SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
D++ R++Y A D + L+ + I +YW D V
Sbjct: 442 ----DLSQRKIYSAQIDGAHGFPAYDTVISSDLQAPDGLAVDWIHGHIYWTD----SVLG 493
Query: 295 KIGKANMDGSNASILV--SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+ A+ G L G A+ +D +G +Y WTDWG +IE+
Sbjct: 494 TVSVADTRGFRRKTLFRQEGSKPRAIVVDPAHGFMY-----------WTDWGVPAKIEKG 542
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL I + +G R+ V+
Sbjct: 543 GLNGVDVYSLVTEDIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNGGNRKTVL 596
>gi|402854614|ref|XP_003891959.1| PREDICTED: low-density lipoprotein receptor-related protein 8
isoform 2 [Papio anubis]
Length = 960
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 153/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 308 CVLAIKRCNQEQDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL 366
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ P CSQ+C N KG + C C GY ++ CKA + LI +N
Sbjct: 367 -DQKTCGDIDECKDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAAGKSPSLIFTN 425
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D + Q
Sbjct: 426 RHEVRRIDLVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPKEQ 485
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++++ L EGLA DW+ HIYW DS I V +G R L N+++PR + +D
Sbjct: 486 EVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRCTLFSRNLSEPRAIAVD 545
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 546 PLQG--FMYWSDWGNQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 602
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 173/416 (41%), Gaps = 79/416 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTC--HPTPLGALCTCPPGEIL 61
CV+L CDG DC + +DE C L C ++F TC CP G
Sbjct: 269 CVHLGWRCDGDRDCKDKSDEA-DCPLGTCHGNEFQCGDGTCVLAIKRCNQEQDCPDG--- 324
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SAA 116
S+++ Q +NEC G CS +CT+ K + C+C G+ L D TC I+ A
Sbjct: 325 SDEAGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGDIDECKDPDAC 383
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
I N + + D++ G + I + + + RI++
Sbjct: 384 SQICVNYKGYFKCECYPGYE----MDLLTKNCKAAAGKSPSLIFTNRH----EVRRIDLV 435
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RSTI 232
N + I + K+ + LD T ++W D +I MD ++ + +
Sbjct: 436 KRNYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPKEQEVL 488
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
I +++ P GL +D + + +YW D G
Sbjct: 489 IDEQLHSPEGLAVDW------------------------------VHKHIYWTDSGNK-- 516
Query: 293 PLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
I A +DG L S L E A+A+D G +Y W+DWG +IE
Sbjct: 517 --TISVATVDGGRRCTLFSRNLSEPRAIAVDPLQGFMY-----------WSDWGNQAKIE 563
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL + ++ G R+ +I
Sbjct: 564 KSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKMLI 619
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL--AKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D +G NR +L + D ++ P G+
Sbjct: 573 QTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKMLISSTDFLSHPFGIA 632
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 633 V----FEDKVFWTD 642
>gi|402854612|ref|XP_003891958.1| PREDICTED: low-density lipoprotein receptor-related protein 8
isoform 1 [Papio anubis]
Length = 901
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 153/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 308 CVLAIKRCNQEQDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL 366
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ P CSQ+C N KG + C C GY ++ CKA + LI +N
Sbjct: 367 -DQKTCGDIDECKDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAAGKSPSLIFTN 425
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D + Q
Sbjct: 426 RHEVRRIDLVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPKEQ 485
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++++ L EGLA DW+ HIYW DS I V +G R L N+++PR + +D
Sbjct: 486 EVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRCTLFSRNLSEPRAIAVD 545
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 546 PLQG--FMYWSDWGNQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 602
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 174/416 (41%), Gaps = 79/416 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTC--HPTPLGALCTCPPGEIL 61
CV+L CDG DC + +DE C L C ++F TC CP G
Sbjct: 269 CVHLGWRCDGDRDCKDKSDEA-DCPLGTCHGNEFQCGDGTCVLAIKRCNQEQDCPDG--- 324
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SAA 116
S+++ Q +NEC G CS +CT+ K + C+C G+ L D TC I+ A
Sbjct: 325 SDEAGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGDIDECKDPDAC 383
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
I N + + D++ G + I + + + RI++
Sbjct: 384 SQICVNYKGYFKCECYPGYE----MDLLTKNCKAAAGKSPSLIFTNRH----EVRRIDLV 435
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RSTI 232
N + I + K+ + LD T ++W D +I MD ++ + +
Sbjct: 436 KRNYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPKEQEVL 488
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
I +++ P GL +D + + +YW D G +
Sbjct: 489 IDEQLHSPEGLAVDW------------------------------VHKHIYWTDSGNKTI 518
Query: 293 PLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
+ A +DG L S L E A+A+D G +Y W+DWG +IE
Sbjct: 519 SV----ATVDGGRRCTLFSRNLSEPRAIAVDPLQGFMY-----------WSDWGNQAKIE 563
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL + ++ G R+ +I
Sbjct: 564 KSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKMLI 619
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL--AKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D +G NR +L + D ++ P G+
Sbjct: 573 QTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKMLISSTDFLSHPFGIA 632
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 633 VFEDK----VFWTD 642
>gi|109004872|ref|XP_001112940.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
isoform 4 [Macaca mulatta]
Length = 959
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 153/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 308 CVLAIKRCNQEQDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL 366
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ P CSQ+C N KG + C C GY ++ CKA + LI +N
Sbjct: 367 -DQKTCGDIDECKDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAAGKSPSLIFTN 425
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D + Q
Sbjct: 426 RHEVRRIDLVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPKEQ 485
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++++ L EGLA DW+ HIYW DS I V +G R L N+++PR + +D
Sbjct: 486 EVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRCTLFSRNLSEPRAIAVD 545
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 546 PLQG--FMYWSDWGNQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 602
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 173/416 (41%), Gaps = 79/416 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTC--HPTPLGALCTCPPGEIL 61
CV+L CDG DC + +DE C L C ++F TC CP G
Sbjct: 269 CVHLGWRCDGDRDCKDKSDEA-DCPLGTCHGNEFQCGDGTCVLAIKRCNQEQDCPDG--- 324
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SAA 116
S+++ Q +NEC G CS +CT+ K + C+C G+ L D TC I+ A
Sbjct: 325 SDEAGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGDIDECKDPDAC 383
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
I N + + D++ G + I + + + RI++
Sbjct: 384 SQICVNYKGYFKCECYPGYE----MDLLTKNCKAAAGKSPSLIFTNRH----EVRRIDLV 435
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RSTI 232
N + I + K+ + LD T ++W D +I MD ++ + +
Sbjct: 436 KRNYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPKEQEVL 488
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
I +++ P GL +D + + +YW D G
Sbjct: 489 IDEQLHSPEGLAVDW------------------------------VHKHIYWTDSGNK-- 516
Query: 293 PLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
I A +DG L S L E A+A+D G +Y W+DWG +IE
Sbjct: 517 --TISVATVDGGRRCTLFSRNLSEPRAIAVDPLQGFMY-----------WSDWGNQAKIE 563
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL + ++ G R+ +I
Sbjct: 564 KSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKMLI 619
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL--AKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D +G NR +L + D ++ P G+
Sbjct: 573 QTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKMLISSTDFLSHPFGIA 632
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 633 V----FEDKVFWTD 642
>gi|119627146|gb|EAX06741.1| low density lipoprotein receptor-related protein 8, apolipoprotein
e receptor, isoform CRA_b [Homo sapiens]
Length = 963
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 154/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 311 CVLAIKHCNQEQDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL 369
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ P CSQ+C N KG + C C GY ++ CKA + LI +N
Sbjct: 370 -DQKTCGDIDECKDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAAGKSPSLIFTN 428
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D + Q
Sbjct: 429 RHEVRRIDLVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPKEQ 488
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++++ L EGLA DW+ HIYW DS I V +G R L N+++PR + +D
Sbjct: 489 EVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRRTLFSRNLSEPRAIAVD 548
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG+ +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 549 PLRG--FMYWSDWGDQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 605
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 174/417 (41%), Gaps = 79/417 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTC--HPTPLGALCTCPPGEI 60
CV+L CDG DC + +DE C L C+ +F TC CP G
Sbjct: 271 ECVHLGWRCDGDRDCKDKSDEA-DCPLGTCRGDEFQCGDGTCVLAIKHCNQEQDCPDG-- 327
Query: 61 LSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SA 115
S+++ Q +NEC G CS +CT+ K + C+C G+ L D TC I+ A
Sbjct: 328 -SDEAGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGDIDECKDPDA 385
Query: 116 AFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEV 175
I N + + D++ G + I + + + RI++
Sbjct: 386 CSQICVNYKGYFKCECYPGYE----MDLLTKNCKAAAGKSPSLIFTNRH----EVRRIDL 437
Query: 176 CDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RST 231
N + I + K+ + LD T ++W D +I MD ++ +
Sbjct: 438 VKRNYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPKEQEV 490
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+I +++ P GL +D + + +YW D G
Sbjct: 491 LIDEQLHSPEGLAVDW------------------------------VHKHIYWTDSGNK- 519
Query: 292 VPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
I A +DG L S L E A+A+D G +Y W+DWG+ +I
Sbjct: 520 ---TISVATVDGGRRRTLFSRNLSEPRAIAVDPLRGFMY-----------WSDWGDQAKI 565
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
E+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL + ++ G R+ +I
Sbjct: 566 EKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTLI 622
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLAKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D +G NR ++ + D ++ P G+
Sbjct: 576 QTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTLISSTDFLSHPFGIA 635
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 636 V----FEDKVFWTD 645
>gi|61744471|ref|NP_004622.2| low-density lipoprotein receptor-related protein 8 isoform 1
precursor [Homo sapiens]
gi|259016389|sp|Q14114.4|LRP8_HUMAN RecName: Full=Low-density lipoprotein receptor-related protein 8;
Short=LRP-8; AltName: Full=Apolipoprotein E receptor 2;
Flags: Precursor
Length = 963
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 154/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 311 CVLAIKHCNQEQDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL 369
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ P CSQ+C N KG + C C GY ++ CKA + LI +N
Sbjct: 370 -DQKTCGDIDECKDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAAGKSPSLIFTN 428
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D + Q
Sbjct: 429 RHEVRRIDLVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPKEQ 488
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++++ L EGLA DW+ HIYW DS I V +G R L N+++PR + +D
Sbjct: 489 EVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRRTLFSRNLSEPRAIAVD 548
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG+ +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 549 PLRG--FMYWSDWGDQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 605
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 174/416 (41%), Gaps = 79/416 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTC--HPTPLGALCTCPPGEIL 61
CV+L CDG DC + +DE C L C+ +F TC CP G
Sbjct: 272 CVHLGWRCDGDRDCKDKSDEA-DCPLGTCRGDEFQCGDGTCVLAIKHCNQEQDCPDG--- 327
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SAA 116
S+++ Q +NEC G CS +CT+ K + C+C G+ L D TC I+ A
Sbjct: 328 SDEAGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGDIDECKDPDAC 386
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
I N + + D++ G + I + + + RI++
Sbjct: 387 SQICVNYKGYFKCECYPGYE----MDLLTKNCKAAAGKSPSLIFTNRH----EVRRIDLV 438
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RSTI 232
N + I + K+ + LD T ++W D +I MD ++ + +
Sbjct: 439 KRNYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPKEQEVL 491
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
I +++ P GL +D + + +YW D G
Sbjct: 492 IDEQLHSPEGLAVDW------------------------------VHKHIYWTDSGNK-- 519
Query: 293 PLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
I A +DG L S L E A+A+D G +Y W+DWG+ +IE
Sbjct: 520 --TISVATVDGGRRRTLFSRNLSEPRAIAVDPLRGFMY-----------WSDWGDQAKIE 566
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL + ++ G R+ +I
Sbjct: 567 KSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTLI 622
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLAKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D +G NR ++ + D ++ P G+
Sbjct: 576 QTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTLISSTDFLSHPFGIA 635
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 636 V----FEDKVFWTD 645
>gi|291231396|ref|XP_002735650.1| PREDICTED: low density lipoprotein receptor-related protein 1-like,
partial [Saccoglossus kowalevskii]
Length = 886
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 153/305 (50%), Gaps = 50/305 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C+ +VC+G DC +DE C + EC H G CS+ C G C CP G L
Sbjct: 579 QCIAEHQVCNGANDCD--SDE-LHCGINECAHDNGGCSHICDDRISGYKCLCPEGYSLDK 635
Query: 64 DSVTCQDMNECEQPGY-CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D +TC+D NECE CSQ+C N GS+ C C GY LE + HTCK + FL+ SN
Sbjct: 636 DGITCKDFNECENVTLPCSQLCHNDIGSFRCYCTHGYELEPNGHTCKHATNEEPFLLFSN 695
Query: 123 RHSILVADLEEKGKD--------------------------------------------H 138
R+ I L G+D H
Sbjct: 696 RYYIRKLGLYRPGQDYDFVLQDLINAVALDFDVQEGYVYWSDVTGQRSNISRAKIDDEKH 755
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
+ Q I L +GLA DW+G ++YW D + IEV +G R VL + +PR +
Sbjct: 756 KVQRIHTLNLLNPDGLAVDWVGRNLYWCDKGKDTIEVSKLDGRFRKVLINKELDEPRALA 815
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
LDP G +++WTDWG P I R GMDGS+ + +++ K+ WPNGLT+D ++R+Y+AD++
Sbjct: 816 LDPFNG--YMYWTDWGAKPYIGRAGMDGSDVTRLVTEKLGWPNGLTIDYGSQRIYWADAR 873
Query: 259 LDFID 263
D+I+
Sbjct: 874 EDYIE 878
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 338 LFWTDWG-ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
++WT+W E+P I + G + +II T I PNGLT+D R+Y++D++LD ++ C
Sbjct: 1 MYWTNWNDESPSIMKAFQGGFDMHSIIDTDIQTPNGLTIDHKAARLYWSDARLDKLERCK 60
Query: 397 YDGTGRQQVILIDLMVEF 414
DGT R ++ + + F
Sbjct: 61 LDGTERVVIVSGEPVHSF 78
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 46/137 (33%)
Query: 208 LFWTDWG-ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKS 266
++WT+W E+P I + G + +II T I PNGLT+D R+Y++D++LD
Sbjct: 1 MYWTNWNDESPSIMKAFQGGFDMHSIIDTDIQTPNGLTIDHKAARLYWSDARLD------ 54
Query: 267 LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGM 326
K+ + +DG+ ++VSG+ + G+
Sbjct: 55 ----------------------------KLERCKLDGTERVVIVSGEPVHSF------GL 80
Query: 327 LYYSTLKCTRWLFWTDW 343
Y +L+WTDW
Sbjct: 81 AVYGN-----YLYWTDW 92
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ + + GL D +YW D+RL+++E C +GT R+V+ G+ +
Sbjct: 26 IIDTDIQTPNGLTIDHKAARLYWSDARLDKLERCKLDGTERVVIVSGEPVHSFGLAV--- 82
Query: 203 PGTRWLFWTDW 213
+L+WTDW
Sbjct: 83 -YGNYLYWTDW 92
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 15/136 (11%)
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDGSNRST--IISTKIY 368
GQ Y+ + DL N + ++ +++W+D G+ I R +D I + +
Sbjct: 708 GQDYDFVLQDLINAVALDFDVQ-EGYVYWSDVTGQRSNISRAKIDDEKHKVQRIHTLNLL 766
Query: 369 WPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALA 428
P+GL +D R +Y+ D D I+ DG R+ +I +L + ALA
Sbjct: 767 NPDGLAVDWVGRNLYWCDKGKDTIEVSKLDGRFRKVLINKEL-----------DEPRALA 815
Query: 429 LDLENGMLYYSTEGAE 444
LD NG +Y++ GA+
Sbjct: 816 LDPFNGYMYWTDWGAK 831
>gi|195457050|ref|XP_002075403.1| GK17732 [Drosophila willistoni]
gi|194171488|gb|EDW86389.1| GK17732 [Drosophila willistoni]
Length = 2014
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/333 (33%), Positives = 167/333 (50%), Gaps = 54/333 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGA-LCTCPPGEILSN 63
CV+ VCDG+ DCP G DE C + C C T G C C G +++
Sbjct: 511 CVHQKHVCDGQNDCPLGEDE-VNCPEEQICPDHKQCEQLCIKTARGRDECACRLGYLMNE 569
Query: 64 DSVTCQDMNECE--QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+ V C D++EC+ CSQ C NT+GS++CSC GY+L D TCKA+ + L+ +
Sbjct: 570 NKVNCTDIDECQYLTSPVCSQKCHNTQGSFVCSCESGYILRPDLRTCKALGGAMTLLVAN 629
Query: 122 -----------NRHSILVADL---------EEKG-----------------KDHRAQDIV 144
NR++ +V L + KG R +D++
Sbjct: 630 RWDIRRVTLSNNRYTAIVKGLHNAIALDFHQRKGLLFWSDVSTDVIKMVYMNGTRVRDVI 689
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
GL+ G+A DWI ++W DS R+EV + G R V+A +++ +PR +++ PG
Sbjct: 690 KWGLESPGGIAVDWIHDLLFWTDSGTRRVEVSNFQGNLRTVIASNDLDKPRAIVI--HPG 747
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
FW+DWG NP+IER MDGS R IIS + WPNGL +D ++Y+AD+K I+C
Sbjct: 748 EALAFWSDWGPNPKIERAHMDGSQRQVIISKGVTWPNGLAIDYPNHKIYWADAKQHAIEC 807
Query: 265 KSLE-------IKTNVNYS---TIFR-KLYWID 286
+L+ + T++ + TIF +YW D
Sbjct: 808 SNLDGSDRIKILSTHLPHPFALTIFEDTMYWTD 840
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 144/356 (40%), Gaps = 61/356 (17%)
Query: 38 GLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDM-NECEQPGYCSQMCTNTKGSYICSCN 96
G CS+ C P C CP G L +D TC+ ++ + + N
Sbjct: 894 GGCSHLCLPNKTSRRCGCPIGLSLKDDGKTCKSAADKLVLVARRKDIRLRQLNNKPAEPN 953
Query: 97 E-GYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG--KDH----RAQDIVVSGLD 149
E ++ DN + H+ A S+ I D+E K H Q +V S L
Sbjct: 954 EIDMIVPLDN-----LKHAVALDWCSDTDFIYWTDVERSSINKAHLNGSYQQRVVHSNLV 1008
Query: 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
GLA DWI +YW D NRIEV NG R +L + + +PR ++++P G +F
Sbjct: 1009 SPVGLALDWITDKLYWTDPSTNRIEVATTNGKMRTLLVWEKLDKPRDIVVNPIDGL--MF 1066
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEI 269
W+DWGE IER MDG NR I S K+ WPNGL +D ++YF D K+LE
Sbjct: 1067 WSDWGEEAMIERANMDGHNRVIISSKKLIWPNGLAIDYDKSKLYFVDGGT-----KTLE- 1120
Query: 270 KTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
N DG+ I+++ L LD+ +G +Y
Sbjct: 1121 ----------------------------NMNFDGTGRKIIIN-NLGHPFGLDVSDGRVY- 1150
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
WTDW + + G ST+I+ + RRV+ A
Sbjct: 1151 ----------WTDWDTKSAMSADKLTGKGISTVIANSSDLMDIRVFHRTRRRVFNA 1196
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 111/233 (47%), Gaps = 42/233 (18%)
Query: 71 MNECE-QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK-------------------- 109
N C+ Q G CS +C SY C+C G L D TC
Sbjct: 1194 FNACDKQNGGCSHLCLLNPTSYTCACAVGVQLREDKRTCSEGPTKYILFAHRIDIRQISL 1253
Query: 110 -------------AINHSAAFLIISNRHSILVADLEEKGKDHRAQD------IVVSGLDL 150
I+++ A + I +D E + D ++ L+
Sbjct: 1254 DFDHLIDVVLPLPPISNAVALDVDRATGYIYWSDTIENVIMSSSPDGLHVHKVIGESLEN 1313
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
+GL D IG IYW D+ + IEV + +G+NR V+A ++ PRG+ LD G LFW
Sbjct: 1314 PDGLVVDSIGRTIYWADAGRHTIEVANLDGSNRHVIAYKDLESPRGLALDYEAGL--LFW 1371
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
TDWG +IER +DG++RS I++ + WPNGL+LD+ ++R+Y+ D++L ID
Sbjct: 1372 TDWGHYRKIERSHLDGNDRSRIVTANLGWPNGLSLDLKSKRIYWVDARLKTID 1424
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 171/446 (38%), Gaps = 104/446 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT--------- 54
RC+ T +CDG DC + DE C L +C LC + T L +C
Sbjct: 465 RCILRTWLCDGYPDCSSAEDE-VDCHL-QCDAGQFLCPAKKNITNL-KICVHQKHVCDGQ 521
Query: 55 --CPPGEILSNDSVTCQDMNECEQPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAI 111
CP GE D V C + C C Q+C T +G C+C GY++ + C I
Sbjct: 522 NDCPLGE----DEVNCPEEQICPDHKQCEQLCIKTARGRDECACRLGYLMNENKVNCTDI 577
Query: 112 ----------------NHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLA 155
N +F+ IL DL R + + L+
Sbjct: 578 DECQYLTSPVCSQKCHNTQGSFVCSCESGYILRPDL-------RTCKALGGAMTLLVANR 630
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
+D I + NR + N I L + Q +G+ LFW+D
Sbjct: 631 WD-----IRRVTLSNNRYTAIVKGLHNAIAL---DFHQRKGL----------LFWSDVST 672
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNY 275
+ I+ + M+G+ +I + P G+ +D
Sbjct: 673 DV-IKMVYMNGTRVRDVIKWGLESPGGIAVDW---------------------------- 703
Query: 276 STIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCT 335
I L+W D G V + +N G+ +++ S L + A+ + G
Sbjct: 704 --IHDLLFWTDSGTRRVEV----SNFQGNLRTVIASNDLDKPRAIVIHPGEAL------- 750
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
FW+DWG NP+IER MDGS R IIS + WPNGL +D ++Y+AD+K I+
Sbjct: 751 --AFWSDWGPNPKIERAHMDGSQRQVIISKGVTWPNGLAIDYPNHKIYWADAKQHAIECS 808
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ R +++ L F + D
Sbjct: 809 NLDGSDRIKILSTHLPHPFALTIFED 834
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 145/364 (39%), Gaps = 107/364 (29%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C K S C C G L+ D TCK+ + ++++ R I + L K +
Sbjct: 894 GGCSHLCLPNKTSRRCGCPIGLSLKDDGKTCKSA--ADKLVLVARRKDIRLRQLNNKPAE 951
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
D++V +L +A DW
Sbjct: 952 PNEIDMIVPLDNLKHAVALDWCSD------------------------------------ 975
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
T +++WTD E I + ++GS + ++ + + P GL LD T
Sbjct: 976 -------TDFIYWTD-VERSSINKAHLNGSYQQRVVHSNLVSPVGLALDWITD------- 1020
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KLYW D N +I A +G ++LV +L +
Sbjct: 1021 -----------------------KLYWTDPSTN----RIEVATTNGKMRTLLVWEKLDKP 1053
Query: 318 --LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
+ ++ +G++ FW+DWGE IER MDG NR I S K+ WPNGL +
Sbjct: 1054 RDIVVNPIDGLM-----------FWSDWGEEAMIERANMDGHNRVIISSKKLIWPNGLAI 1102
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGM 435
D ++YF D ++ N+DGTGR+ +I N+L G P LD+ +G
Sbjct: 1103 DYDKSKLYFVDGGTKTLENMNFDGTGRKIII---------NNL----GHP-FGLDVSDGR 1148
Query: 436 LYYS 439
+Y++
Sbjct: 1149 VYWT 1152
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 110/249 (44%), Gaps = 39/249 (15%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYI 92
C G CS+ C P G C CP G L +S T EC+ + G +
Sbjct: 1501 CGRNNGGCSHLCLRNPSGFTCQCPIGLRLRENSTT-----ECQNLPDDYLLIALRSGIGM 1555
Query: 93 CSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDI--------- 143
S N G ++ L IS H +V D + D+
Sbjct: 1556 ISLNSGDYMD-------------VVLPISGVHGAVVLDYHYRNNWLFFADVNLDVIRRVN 1602
Query: 144 --------VVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
V+ DL+ G+A DWI ++YW D+ IEV +G+ R L +D +
Sbjct: 1603 LLNFTDNKVIVSTDLLTPNGIAVDWIAENLYWSDTDRKVIEVSRLDGSCRKKLIEDGLGD 1662
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
PR +++ P +LFW+DW +IER +DGSNR+ I+++ + +P GLT+D RR+
Sbjct: 1663 PRSLIVHPKKA--YLFWSDWDSPSKIERSYLDGSNRTAIVTSGVGFPTGLTIDFTNRRLL 1720
Query: 254 FADSKLDFI 262
+AD+ D I
Sbjct: 1721 WADALDDNI 1729
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 45/212 (21%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGM-DGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
++LD WLF+ D + I R+ + + ++ I+ST + PNG+ +D +Y+
Sbjct: 1576 AVVLDYHYRNNWLFFADVNLDV-IRRVNLLNFTDNKVIVSTDLLTPNGIAVDWIAENLYW 1634
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
+D+ D K +E+ + +DGS L+ L
Sbjct: 1635 SDT-----DRKVIEV-----------------------------SRLDGSCRKKLIEDGL 1660
Query: 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
+ +L + Y LFW+DW +IER +DGSNR+ I+++ + +P GLT
Sbjct: 1661 GDPRSLIVHPKKAY---------LFWSDWDSPSKIERSYLDGSNRTAIVTSGVGFPTGLT 1711
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+D RR+ +AD+ D I +++G RQ ++
Sbjct: 1712 IDFTNRRLLWADALDDNIGQVDFNGKRRQTIV 1743
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 125/287 (43%), Gaps = 46/287 (16%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
IV + L GL+ D IYW+D+RL I+ CD G R ++ ++ P + L
Sbjct: 1393 IVTANLGWPNGLSLDLKSKRIYWVDARLKTIDSCDYTGNQRKLIMS-SLHHPYALSLTED 1451
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN--GLT-LDIATRRVYFADS-- 257
+++WTDW + ++R I + + N GL + + T+ AD+
Sbjct: 1452 ----YIYWTDWKSK------ALHMADRRNISAKRDVMTNIDGLMDIKVITKHQPLADNVC 1501
Query: 258 -------------KLDFIDCK-SLEIKTNVNYSTIFRKL---YWIDEGGNGVPLKIGKAN 300
C+ + ++ N +T + L Y + +G+ + I +
Sbjct: 1502 GRNNGGCSHLCLRNPSGFTCQCPIGLRLRENSTTECQNLPDDYLLIALRSGIGM-ISLNS 1560
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG-MDGSNR 359
D + + +SG ++ A+ LD +Y WLF+ D + I R+ ++ ++
Sbjct: 1561 GDYMDVVLPISG-VHGAVVLD-----YHYR----NNWLFFADVNLDV-IRRVNLLNFTDN 1609
Query: 360 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I+ST + PNG+ +D +Y++D+ I+ DG+ R+++I
Sbjct: 1610 KVIVSTDLLTPNGIAVDWIAENLYWSDTDRKVIEVSRLDGSCRKKLI 1656
>gi|109004875|ref|XP_001112880.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
isoform 2 [Macaca mulatta]
Length = 900
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 153/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 308 CVLAIKRCNQEQDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL 366
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ P CSQ+C N KG + C C GY ++ CKA + LI +N
Sbjct: 367 -DQKTCGDIDECKDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAAGKSPSLIFTN 425
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D + Q
Sbjct: 426 RHEVRRIDLVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPKEQ 485
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++++ L EGLA DW+ HIYW DS I V +G R L N+++PR + +D
Sbjct: 486 EVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRCTLFSRNLSEPRAIAVD 545
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 546 PLQG--FMYWSDWGNQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 602
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 174/416 (41%), Gaps = 79/416 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTC--HPTPLGALCTCPPGEIL 61
CV+L CDG DC + +DE C L C ++F TC CP G
Sbjct: 269 CVHLGWRCDGDRDCKDKSDEA-DCPLGTCHGNEFQCGDGTCVLAIKRCNQEQDCPDG--- 324
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SAA 116
S+++ Q +NEC G CS +CT+ K + C+C G+ L D TC I+ A
Sbjct: 325 SDEAGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGDIDECKDPDAC 383
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
I N + + D++ G + I + + + RI++
Sbjct: 384 SQICVNYKGYFKCECYPGYE----MDLLTKNCKAAAGKSPSLIFTNRH----EVRRIDLV 435
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RSTI 232
N + I + K+ + LD T ++W D +I MD ++ + +
Sbjct: 436 KRNYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPKEQEVL 488
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
I +++ P GL +D + + +YW D G +
Sbjct: 489 IDEQLHSPEGLAVDW------------------------------VHKHIYWTDSGNKTI 518
Query: 293 PLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
+ A +DG L S L E A+A+D G +Y W+DWG +IE
Sbjct: 519 SV----ATVDGGRRCTLFSRNLSEPRAIAVDPLQGFMY-----------WSDWGNQAKIE 563
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL + ++ G R+ +I
Sbjct: 564 KSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKMLI 619
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL--AKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D +G NR +L + D ++ P G+
Sbjct: 573 QTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKMLISSTDFLSHPFGIA 632
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 633 VFEDK----VFWTD 642
>gi|47227965|emb|CAF97594.1| unnamed protein product [Tetraodon nigroviridis]
Length = 868
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/339 (33%), Positives = 166/339 (48%), Gaps = 60/339 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ ++VCD DC + +DE C L EC G CS+ C P+G C CP G L
Sbjct: 270 ECIDSSRVCDSVKDCKDRSDEPKKECGLNECMINNGGCSHVCVDQPIGFDCQCPAGYQLL 329
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG + C C EGY ++ TCKA S +L+ +N
Sbjct: 330 -DRKTCGDIDECENPDACSQICINYKGDFKCECYEGYEMDPVTKTCKAEGKS-PYLLFTN 387
Query: 123 RHSILVADLEEKGKD------------------------------------HRAQD---- 142
RH I DL +K H A D
Sbjct: 388 RHEIRRIDLVKKDYSQVVSTQKNTVALDLDVANNRVFWCDRFHRKIYSAFIHEASDPSQQ 447
Query: 143 --IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+V S L GLA DW+ ++YW DS I V + T R VL ++++PR + LD
Sbjct: 448 VPLVDSHLHTPVGLALDWLQHNLYWTDSGDKSISVASVDATKRRVLISTDLSEPRSIALD 507
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++W+DWG +IE+ GM+G +R +++ I WPNG+TLD+A RR+Y+ DSKL
Sbjct: 508 PHHG--FMYWSDWGTRAKIEKAGMNGVDRQVLVADSIEWPNGITLDVANRRLYWVDSKLH 565
Query: 261 FI---DCKSLEIKTNVNYSTIF----------RKLYWID 286
I D +T+++ + + ++YW D
Sbjct: 566 LIASVDLNGAHRRTHMSSAEMLGHPYALAVFEDRIYWTD 604
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 40/217 (18%)
Query: 207 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD---------- 256
+L +T+ E I RI + + S ++ST+ L LD+A RV++ D
Sbjct: 382 YLLFTNRHE---IRRIDLVKKDYSQVVSTQKNT-VALDLDVANNRVFWCDRFHRKIYSAF 437
Query: 257 --------SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
++ +D L + + LYW D G + + A++D + +
Sbjct: 438 IHEASDPSQQVPLVD-SHLHTPVGLALDWLQHNLYWTDSGDKSISV----ASVDATKRRV 492
Query: 309 LVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 366
L+S L E ++ALD +G +Y W+DWG +IE+ GM+G +R +++
Sbjct: 493 LISTDLSEPRSIALDPHHGFMY-----------WSDWGTRAKIEKAGMNGVDRQVLVADS 541
Query: 367 IYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403
I WPNG+TLD+A RR+Y+ DSKL I + +G R+
Sbjct: 542 IEWPNGITLDVANRRLYWVDSKLHLIASVDLNGAHRR 578
>gi|195024691|ref|XP_001985922.1| GH21081 [Drosophila grimshawi]
gi|193901922|gb|EDW00789.1| GH21081 [Drosophila grimshawi]
Length = 4620
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 184/430 (42%), Gaps = 95/430 (22%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
+++C+ ++++CDG DC + DEG C C CS+ CH TP G +C+CPP L
Sbjct: 1135 SNKCITVSQLCDGHNDCEDTTDEGFLCADKLCDQGHE-CSHNCHNTPEGYICSCPPHLYL 1193
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+ C + CE C+Q+C N SY C C EGY L YD TCK+ ++I +
Sbjct: 1194 QPNGKRCSMQHACEHWDTCAQVCENNGKSYACQCLEGYDLSYDKFTCKSTAPDEPYVIFT 1253
Query: 122 NRHSILVADLEEKGKD-------------------------------------------- 137
NR I +L+ G
Sbjct: 1254 NRQDIRGINLKTLGASSFYSSLRNIIALDFLYSNESSVEIYWTDVIDDKIYRGHLVGESL 1313
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+ +V SGL EGLA DWIG ++YW+DS L++IEV NG+ R L N+ PR +
Sbjct: 1314 RNVEAVVHSGLSTTEGLAVDWIGKNLYWIDSNLDQIEVAQLNGSFRRTLIAGNMESPRAI 1373
Query: 198 MLDPSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIST---KIYWPNGLTLDIATRRVY 253
LDP G LFWTDW +N PRIER M G R I + WPNGLTLD +RVY
Sbjct: 1374 ALDPREGL--LFWTDWDDNSPRIERCSMSGEGRRLISTNWQLSAGWPNGLTLDYTQKRVY 1431
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+ D+K D I DGS +++
Sbjct: 1432 WVDAKSD----------------------------------SISSTKYDGSEHHVVLRN- 1456
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
+++ + S + +++WTDW I +GS+ + T+ P G+
Sbjct: 1457 ------MEMLSHPFAISVFE--NYVYWTDWRTTSVIRANKWNGSDIQVLQRTQTQ-PFGI 1507
Query: 374 TLDIATRRVY 383
+ ++R+ +
Sbjct: 1508 QVLHSSRQPW 1517
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 175/364 (48%), Gaps = 65/364 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EILSN 63
C++ +CD + DC + +DE C++ EC +C + C +G C C PG +L+N
Sbjct: 2909 CISADLLCDRRNDCGDYSDE-EHCNVNECLIP-DICEHECEDKVVGYKCLCRPGYRLLAN 2966
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
C D++EC++ CSQ+C NT GSY C C +GY L D+HTCKA ++ LI SNR
Sbjct: 2967 SLRLCTDIDECDEHQPCSQICVNTYGSYKCLCAKGYELR-DHHTCKATSNVTMKLIFSNR 3025
Query: 124 H-----------SILVADLEEK----------------------------GKDHRAQDIV 144
+ SIL+ L +++ Q +
Sbjct: 3026 YYIRQVNHTGNGSILIHSLSNAVALDFDWDSQCLYWSDVTSTVGTIKRHCPAENKTQTLH 3085
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ L +GLA DW+ ++YW D L+ IEV +G R VL +++ +PRG+ LDP
Sbjct: 3086 QAMLKNPDGLAVDWVAKNLYWCDKGLDTIEVSQLDGKYRRVLINEHLREPRGIALDPY-- 3143
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
R ++W+DWG+NP I + GMDGS II + WPN LT+ T+++++ D++ D I
Sbjct: 3144 QRHIYWSDWGDNPHIGKAGMDGSQPRMIIRENLGWPNALTISFETQQIFWGDAREDTISV 3203
Query: 265 KSLE-----------IKTNVNYSTIFR------KLYWIDEGGNGVPLKIGKANMDGSNAS 307
L+ I N+N IF ++YW D + DG N S
Sbjct: 3204 SDLDGKNTRLLLARSINPNLNLHHIFAIAVWEDRIYWSDWETKSIEY---CNKYDGQNCS 3260
Query: 308 ILVS 311
L++
Sbjct: 3261 TLIT 3264
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 137/309 (44%), Gaps = 58/309 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL-SN 63
C+ L++ CDG DC N + CD CS C TP GA C CP G++ S
Sbjct: 84 CLELSRFCDGHWDCDN---DELHCDKQNVACAALNCSYNCKLTPQGARCYCPAGQVAEST 140
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYV----------------------- 100
+S C D +EC PG C Q C NT GSY C+C GY
Sbjct: 141 NSTRCVDYDECTVPGICDQQCKNTPGSYECACISGYTKQGKRCLGINVPPSEPATLSTLS 200
Query: 101 LEYDNHTCKAINHSAAFLIISNRHSILVADLE-----------EKGKD-----HRAQDIV 144
++ A++ + A I+S + V E +K D R D
Sbjct: 201 MDTIRRISTAVDAAGAGQILSTQPVQFVLAYEVWHRNRTLCMLQKMIDLVMHCQRIDDAS 260
Query: 145 V----------SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
V S + L DWI G+ Y+L+ + +C N L + QP
Sbjct: 261 VNWTLPVSAFNSPHQIFVELRLDWISGNWYFLNEDDGMVFLC-TNAVTYCRLILQQVEQP 319
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
++LD + G +LF+TDW +P + R +DGSNR+T++ST++Y +G+TLD+A+ VY+
Sbjct: 320 SSLVLDSTKG--YLFYTDW--SPSLSRALLDGSNRTTLVSTQVYHLSGVTLDLASEHVYW 375
Query: 255 ADSKLDFID 263
D D I+
Sbjct: 376 IDVYKDVIE 384
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 167/445 (37%), Gaps = 106/445 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCD----LAEC-------KHKFGLC---SNTCHPTP-- 48
C++ VCDG DCP+G DE GC+ L C + + GLC + TC P
Sbjct: 2820 CIDSHYVCDGDEDCPSGDDEYEGCEPVYPLHACPGGVLMHQCQDGLCIFKNQTCDGKPDC 2879
Query: 49 ------LGALCT-----------------CPPGEILSNDSVTCQD--------MNECEQP 77
L +LC C ++L + C D +NEC P
Sbjct: 2880 GDGSDELASLCAHTRACNGADDFRCKNGACISADLLCDRRNDCGDYSDEEHCNVNECLIP 2939
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
C C + Y C C GY L L S R L D++E +
Sbjct: 2940 DICEHECEDKVVGYKCLCRPGYRL----------------LANSLR---LCTDIDECDEH 2980
Query: 138 HRAQDIVVSGLDLVEGL---AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
I V+ + L Y+ H S + + +NR + + N T
Sbjct: 2981 QPCSQICVNTYGSYKCLCAKGYELRDHHTCKATSNVTMKLI----FSNRYYIRQVNHTG- 3035
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
G +L S DW S +YW + + +R
Sbjct: 3036 NGSILIHSLSNAVALDFDWD-------------------SQCLYWSDVTSTVGTIKRHCP 3076
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
A++K + L+ + + + LYW D+G + + + + +DG +L++ L
Sbjct: 3077 AENKTQTLHQAMLKNPDGLAVDWVAKNLYWCDKGLDTIEV----SQLDGKYRRVLINEHL 3132
Query: 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
E + L+ R ++W+DWG+NP I + GMDGS II + WPN LT
Sbjct: 3133 REPRGIALDPYQ---------RHIYWSDWGDNPHIGKAGMDGSQPRMIIRENLGWPNALT 3183
Query: 375 LDIATRRVYFADSKLDFIDFCNYDG 399
+ T+++++ D++ D I + DG
Sbjct: 3184 ISFETQQIFWGDAREDTISVSDLDG 3208
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 109/245 (44%), Gaps = 61/245 (24%)
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL--- 166
+ N+ A + S+ + + G D R ++V+ VEG+A+D + ++W
Sbjct: 2231 SYNYEAQLVYYSDVQLSTINQVHFNGSDQR---VLVTQQGRVEGIAFDMVNEQLFWTSNN 2287
Query: 167 DSRLNRIEV------CDENGTN-RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE-NPR 218
D+ + +E+ ++N + R VL+ + +PRG+ ++P G ++WT+W E +P
Sbjct: 2288 DAAIRSLEMLHLSPQAEQNLPHVRNVLSLQSKDKPRGISVEPCLGM--IYWTNWNEQSPS 2345
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
I+R + G II T I PN LTLD+ +++Y+AD++LD
Sbjct: 2346 IQRAYLTGYGVERIIRTDIKMPNALTLDLEQQQLYWADARLD------------------ 2387
Query: 279 FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWL 338
KI +AN DG+N +L A A M Y L L
Sbjct: 2388 ----------------KIERANYDGTNRVVLAHTTPKHAFA------MAVYGDL-----L 2420
Query: 339 FWTDW 343
FWTDW
Sbjct: 2421 FWTDW 2425
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
+LF+TDW +P + R +DGSNR+T++ST++Y +G+TLD+A+ VY+ D D I+ N
Sbjct: 330 YLFYTDW--SPSLSRALLDGSNRTTLVSTQVYHLSGVTLDLASEHVYWIDVYKDVIERVN 387
Query: 397 YDGTGR 402
YDG R
Sbjct: 388 YDGQQR 393
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 121/327 (37%), Gaps = 83/327 (25%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG--CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + +CDG DC DE L +C+H C N C
Sbjct: 3700 CIRKSALCDGVNDCGKNEDESDQVCAALPKCRHDQFQCEND----------DCISKSFRC 3749
Query: 63 NDSVTCQDMNE---CEQP----GYCSQMCTNTK-GSYICSCNEGYVL-EYDNHTCKAINH 113
+ C D ++ C+ P G CSQ+C K G Y C C GY N TC A
Sbjct: 3750 DGQYNCIDGSDEMNCQPPVCGFGTCSQICIEKKAGHYNCKCTTGYEKGAARNATCLASGP 3809
Query: 114 SAAFLIISNR-------------------------------------------------- 123
L+ S +
Sbjct: 3810 DQILLLASEQEFRFILPAKQEGTTVVGFFQTDSLKIDVFDILIRPKDTLLFWIDSHHGKV 3869
Query: 124 HSILVADLEEKGKDHRAQDIV-------VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
H++ +A +G R + + + LD + LA DWI +Y +DSR N+I
Sbjct: 3870 HTMKIATPHVEGSGVRVRRDLKELTAFNIPDLDDPKSLAVDWITQMVYIIDSRHNQIIAT 3929
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 236
D G I L + P ++L+P +R + W+ EN I +DGSN+ +++
Sbjct: 3930 DIEGKKYISLVSTGMN-PTDIVLEPE--SRVMIWSTL-EN-GILVASLDGSNKKSLVERD 3984
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFID 263
+ WP L++D T R+Y+AD + I+
Sbjct: 3985 VGWPISLSIDYPTGRLYWADYRKGTIE 4011
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPN 371
+ L+L ++ S C ++WT+W E +P I+R + G II T I PN
Sbjct: 2309 HVRNVLSLQSKDKPRGISVEPCLGMIYWTNWNEQSPSIQRAYLTGYGVERIIRTDIKMPN 2368
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
LTLD+ +++Y+AD++LD I+ NYDGT R + F + GD
Sbjct: 2369 ALTLDLEQQQLYWADARLDKIERANYDGTNRVVLAHTTPKHAFAMAVYGD 2418
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 8/116 (6%)
Query: 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
D + G+A DWI G+IYW D++ N IEV +G++R V+ N+ +P + +DP G L
Sbjct: 1960 DWLGGIAIDWIAGNIYWSDTKRNIIEVARLDGSHRYVVVS-NVEKPTALAVDPLQGL--L 2016
Query: 209 FWTDWGENPRIERIGMDGSNRSTIIS-TKIYWP-NGLTLDIATRRVYFADSKLDFI 262
F+ I R G+DGS +++ T W N L +D+ +VY+ ++ D +
Sbjct: 2017 FYV---AQQHIGRTGLDGSQPFVLVNQTSASWAVNSLIVDMDATKVYWCETYPDAL 2069
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 96/240 (40%), Gaps = 59/240 (24%)
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+G V +AYDW+ H+YW S ++ V ++ VL + P + LD PGT
Sbjct: 603 TGWHKVRAMAYDWVNEHLYW--SEYQKLHVAPLRNMSK-VLTFNIDCNPMSLELD--PGT 657
Query: 206 RWLFWTDWGEN---PRIERIGMDGSNRSTIIST----KIYWPNGLTLDIATRRVYFADSK 258
L+W+ W I MDG+++ + + + WP L +D T+R+Y+ D K
Sbjct: 658 GLLYWSQWSSQSCEAGIYSAWMDGTHKELLAKSTDGMSMRWPRSLDVDRRTKRIYWCDFK 717
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
L I+ + +DG+ +L + +
Sbjct: 718 LGTIE----------------------------------RMKLDGTGRELLFKSEQFHPF 743
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY-WPNGLTLDI 377
A+ NG++Y W D N I R + +N ++ S+ ++ P+G +D+
Sbjct: 744 AIVQHNGIVY-----------WAD-NINSTIWRFHVHHANMTSTFSSTVHLQPSGNAVDL 791
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 59/213 (27%)
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPNGLTLDIATRRVYFAD 256
T L+W D E I R+ DGS+R TI+ + W G+ +D +Y++D
Sbjct: 1920 ATDMLYWGD-NELGTISRVRRDGSHRDTILEAINLAGHKQHDWLGGIAIDWIAGNIYWSD 1978
Query: 257 SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG-QLY 315
+K + I+ A +DGS+ ++VS +
Sbjct: 1979 TKRNIIE----------------------------------VARLDGSHRYVVVSNVEKP 2004
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS-TKIYWP-NGL 373
ALA+D G+L+Y + I R G+DGS +++ T W N L
Sbjct: 2005 TALAVDPLQGLLFYVAQQ--------------HIGRTGLDGSQPFVLVNQTSASWAVNSL 2050
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+D+ +VY+ ++ D + +YDG R+Q++
Sbjct: 2051 IVDMDATKVYWCETYPDALMKVDYDGNLREQLL 2083
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 75/185 (40%), Gaps = 22/185 (11%)
Query: 207 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKS 266
+++W+D +N I R G+ II+T I P G +D R +YF+ + I C
Sbjct: 1610 YIYWSDIQQN-EISRAGISSGLIEPIINTNIEKPYGFAIDWIARHMYFSSGQ---IVCTI 1665
Query: 267 LEIKTNVNYSTIFR----------------KLYWIDEGGNGVPLKIGKANMDGSNASIL- 309
L ++T K+YWI + ++ ++N+DGS ++
Sbjct: 1666 LASTLQGEFTTHIHENLNMVDSIALDPANGKMYWIHSTHDSSLWQLEQSNLDGSERFVIH 1725
Query: 310 VSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGS-NRSTIISTKIY 368
++L +D ++ LYYS + E R+ S N T+ + IY
Sbjct: 1726 THNDSMQSLTMDFDSQRLYYSYDNSGIAYYDIPKNETHRVLVASQITSINSLTVYNGSIY 1785
Query: 369 WPNGL 373
+P +
Sbjct: 1786 FPENI 1790
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 14/136 (10%)
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST----KIYWPNG 372
+L LD G+LY W W+ I MDG+++ + + + WP
Sbjct: 650 SLELDPGTGLLY--------WSQWSSQSCEAGIYSAWMDGTHKELLAKSTDGMSMRWPRS 701
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLE 432
L +D T+R+Y+ D KL I+ DGTGR+ + + F ++ NG+ A ++
Sbjct: 702 LDVDRRTKRIYWCDFKLGTIERMKLDGTGRELLFKSEQFHPFA--IVQHNGIVYWADNIN 759
Query: 433 NGMLYYSTEGAEFLKT 448
+ + + A T
Sbjct: 760 STIWRFHVHHANMTST 775
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 60/305 (19%), Positives = 121/305 (39%), Gaps = 44/305 (14%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK--DNITQPRGMMLDPSPGTRWLFW 210
GL D+ +YW+D++ + I +G+ V+ + + ++ P + S +++W
Sbjct: 1420 GLTLDYTQKRVYWVDAKSDSISSTKYDGSEHHVVLRNMEMLSHPFAI----SVFENYVYW 1475
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID-CKSLEI 269
TDW I +GS+ + T+ P G+ + ++R+ + + D C L +
Sbjct: 1476 TDWRTTSVIRANKWNGSDIQVLQRTQTQ-PFGIQVLHSSRQPWDRNPCGDNNGGCSHLCL 1534
Query: 270 KTNV-NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLY 328
+ + + +D ++ + + V G+ + L N
Sbjct: 1535 LSGRGTFKCECPHVMRLDPADE-------RSCVPNEQVLLFVMGEEIRGIDLHQPNHHTI 1587
Query: 329 YSTLKCTR--------------WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
+ + R +++W+D +N I R G+ II+T I P G
Sbjct: 1588 PTIRQSPRLVAPQRIDFLVEDSYIYWSDIQQN-EISRAGISSGLIEPIINTNIEKPYGFA 1646
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD-NGVPALALDLEN 433
+D R +YF+ ++ C ++ L EFT + + N V ++ALD N
Sbjct: 1647 IDWIARHMYFSSGQI----VCT--------ILASTLQGEFTTHIHENLNMVDSIALDPAN 1694
Query: 434 GMLYY 438
G +Y+
Sbjct: 1695 GKMYW 1699
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 76/380 (20%), Positives = 144/380 (37%), Gaps = 85/380 (22%)
Query: 125 SILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL----DSRLNRIEVCDENG 180
+IL + L+ + H + L++V+ +A D G +YW+ DS L ++E + +G
Sbjct: 1664 TILASTLQGEFTTH-----IHENLNMVDSIALDPANGKMYWIHSTHDSSLWQLEQSNLDG 1718
Query: 181 TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG---------ENPRIERIGMDGS-NRS 230
+ R V+ N + + + +D + + + G E R+ S N
Sbjct: 1719 SERFVIHTHNDSM-QSLTMDFDSQRLYYSYDNSGIAYYDIPKNETHRVLVASQITSINSL 1777
Query: 231 TIISTKIYWPNGL---------------------TLDIATRRVYFADSKLDFIDC----- 264
T+ + IY+P + T I + ++++AD++ C
Sbjct: 1778 TVYNGSIYFPENIQSVIMHCEKEQCLNMSFLRVNTKSIQSMKMFYADAQTGTNTCAGPMR 1837
Query: 265 ---KSLEIKTNVNYSTIFRKLYWIDEGGN-------------GVPLKIGKANMDGSNASI 308
+ L + + L + E N + + +G +D S
Sbjct: 1838 GGCEHLCLSISPTEHVCRCALGYDVEPHNPTRCIPRAEFIFYSIDVMLGVEMIDPSEPFE 1897
Query: 309 LVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST--- 365
L + + + Y++ T L+W D E I R+ DGS+R TI+
Sbjct: 1898 PPKPALVPISRISSASFIEYHAA---TDMLYWGD-NELGTISRVRRDGSHRDTILEAINL 1953
Query: 366 ----KIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+ W G+ +D +Y++D+K + I+ DG+ R V+ VE
Sbjct: 1954 AGHKQHDWLGGIAIDWIAGNIYWSDTKRNIIEVARLDGSHRYVVV---SNVEKPT----- 2005
Query: 422 NGVPALALDLENGMLYYSTE 441
ALA+D G+L+Y +
Sbjct: 2006 ----ALAVDPLQGLLFYVAQ 2021
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 87/219 (39%), Gaps = 26/219 (11%)
Query: 104 DNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLD--LVE--------- 152
++HT I S L+ R LV D D + +I +G+ L+E
Sbjct: 1583 NHHTIPTIRQSPR-LVAPQRIDFLVEDSYIYWSDIQQNEISRAGISSGLIEPIINTNIEK 1641
Query: 153 --GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTR-WLF 209
G A DWI H+Y+ ++ + +N+ + LDP+ G W+
Sbjct: 1642 PYGFAIDWIARHMYFSSGQIVCTILASTLQGEFTTHIHENLNMVDSIALDPANGKMYWIH 1701
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA--DSKLDFIDCKSL 267
T ++E+ +DGS R +I T LT+D ++R+Y++ +S + + D
Sbjct: 1702 STHDSSLWQLEQSNLDGSER-FVIHTHNDSMQSLTMDFDSQRLYYSYDNSGIAYYDIPKN 1760
Query: 268 EIK--------TNVNYSTIFRKLYWIDEGGNGVPLKIGK 298
E T++N T++ + E V + K
Sbjct: 1761 ETHRVLVASQITSINSLTVYNGSIYFPENIQSVIMHCEK 1799
Score = 38.1 bits (87), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL--AECKHKFGLCSNT 43
RC+ LT CD + DCPNG DE P C A C + C+N+
Sbjct: 3502 RCIPLTWRCDDEEDCPNGEDEPPSCHTSKATCDPTYFKCNNS 3543
>gi|68144540|gb|AAH51836.2| Low density lipoprotein receptor-related protein 8, apolipoprotein
e receptor [Homo sapiens]
Length = 904
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 154/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 311 CVLAIKHCNQEQDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL 369
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ P CSQ+C N KG + C C GY ++ CKA + LI +N
Sbjct: 370 -DQKTCGDIDECKDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAAGKSPSLIFTN 428
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D + Q
Sbjct: 429 RHEVRRIDLVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPKEQ 488
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++++ L EGLA DW+ HIYW DS I V +G R L N+++PR + +D
Sbjct: 489 EVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRRTLFSRNLSEPRAIAVD 548
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG+ +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 549 PLRG--FMYWSDWGDQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 605
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 174/416 (41%), Gaps = 79/416 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTC--HPTPLGALCTCPPGEIL 61
CV+L CDG DC + +DE C L C+ +F TC CP G
Sbjct: 272 CVHLGWRCDGDRDCKDKSDEA-DCPLGTCRGDEFQCGDGTCVLAIKHCNQEQDCPDG--- 327
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SAA 116
S+++ Q +NEC G CS +CT+ K + C+C G+ L D TC I+ A
Sbjct: 328 SDEAGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGDIDECKDPDAC 386
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
I N + + D++ G + I + + + RI++
Sbjct: 387 SQICVNYKGYFKCECYPGYE----MDLLTKNCKAAAGKSPSLIFTNRH----EVRRIDLV 438
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RSTI 232
N + I + K+ + LD T ++W D +I MD ++ + +
Sbjct: 439 KRNYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPKEQEVL 491
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
I +++ P GL +D + + +YW D G
Sbjct: 492 IDEQLHSPEGLAVDW------------------------------VHKHIYWTDSGNK-- 519
Query: 293 PLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
I A +DG L S L E A+A+D G +Y W+DWG+ +IE
Sbjct: 520 --TISVATVDGGRRRTLFSRNLSEPRAIAVDPLRGFMY-----------WSDWGDQAKIE 566
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL + ++ G R+ +I
Sbjct: 567 KSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTLI 622
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLAKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D +G NR ++ + D ++ P G+
Sbjct: 576 QTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTLISSTDFLSHPFGIA 635
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 636 V----FEDKVFWTD 645
>gi|119627145|gb|EAX06740.1| low density lipoprotein receptor-related protein 8, apolipoprotein
e receptor, isoform CRA_a [Homo sapiens]
Length = 904
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 154/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 311 CVLAIKHCNQEQDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL 369
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ P CSQ+C N KG + C C GY ++ CKA + LI +N
Sbjct: 370 -DQKTCGDIDECKDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAAGKSPSLIFTN 428
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D + Q
Sbjct: 429 RHEVRRIDLVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPKEQ 488
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++++ L EGLA DW+ HIYW DS I V +G R L N+++PR + +D
Sbjct: 489 EVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRRTLFSRNLSEPRAIAVD 548
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG+ +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 549 PLRG--FMYWSDWGDQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 605
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 174/417 (41%), Gaps = 79/417 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTC--HPTPLGALCTCPPGEI 60
CV+L CDG DC + +DE C L C+ +F TC CP G
Sbjct: 271 ECVHLGWRCDGDRDCKDKSDEA-DCPLGTCRGDEFQCGDGTCVLAIKHCNQEQDCPDG-- 327
Query: 61 LSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SA 115
S+++ Q +NEC G CS +CT+ K + C+C G+ L D TC I+ A
Sbjct: 328 -SDEAGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGDIDECKDPDA 385
Query: 116 AFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEV 175
I N + + D++ G + I + + + RI++
Sbjct: 386 CSQICVNYKGYFKCECYPGYE----MDLLTKNCKAAAGKSPSLIFTNRH----EVRRIDL 437
Query: 176 CDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RST 231
N + I + K+ + LD T ++W D +I MD ++ +
Sbjct: 438 VKRNYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPKEQEV 490
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+I +++ P GL +D + + +YW D G
Sbjct: 491 LIDEQLHSPEGLAVDW------------------------------VHKHIYWTDSGNK- 519
Query: 292 VPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
I A +DG L S L E A+A+D G +Y W+DWG+ +I
Sbjct: 520 ---TISVATVDGGRRRTLFSRNLSEPRAIAVDPLRGFMY-----------WSDWGDQAKI 565
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
E+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL + ++ G R+ +I
Sbjct: 566 EKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTLI 622
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLAKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D +G NR ++ + D ++ P G+
Sbjct: 576 QTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTLISSTDFLSHPFGIA 635
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 636 V----FEDKVFWTD 645
>gi|65301119|ref|NP_001018064.1| low-density lipoprotein receptor-related protein 8 isoform 4
precursor [Homo sapiens]
Length = 904
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 154/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 311 CVLAIKHCNQEQDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL 369
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ P CSQ+C N KG + C C GY ++ CKA + LI +N
Sbjct: 370 -DQKTCGDIDECKDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAAGKSPSLIFTN 428
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D + Q
Sbjct: 429 RHEVRRIDLVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPKEQ 488
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++++ L EGLA DW+ HIYW DS I V +G R L N+++PR + +D
Sbjct: 489 EVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRRTLFSRNLSEPRAIAVD 548
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG+ +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 549 PLRG--FMYWSDWGDQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 605
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 174/416 (41%), Gaps = 79/416 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTC--HPTPLGALCTCPPGEIL 61
CV+L CDG DC + +DE C L C+ +F TC CP G
Sbjct: 272 CVHLGWRCDGDRDCKDKSDEA-DCPLGTCRGDEFQCGDGTCVLAIKHCNQEQDCPDG--- 327
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SAA 116
S+++ Q +NEC G CS +CT+ K + C+C G+ L D TC I+ A
Sbjct: 328 SDEAGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGDIDECKDPDAC 386
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
I N + + D++ G + I + + + RI++
Sbjct: 387 SQICVNYKGYFKCECYPGYE----MDLLTKNCKAAAGKSPSLIFTNRH----EVRRIDLV 438
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RSTI 232
N + I + K+ + LD T ++W D +I MD ++ + +
Sbjct: 439 KRNYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPKEQEVL 491
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
I +++ P GL +D + + +YW D G
Sbjct: 492 IDEQLHSPEGLAVDW------------------------------VHKHIYWTDSGNK-- 519
Query: 293 PLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
I A +DG L S L E A+A+D G +Y W+DWG+ +IE
Sbjct: 520 --TISVATVDGGRRRTLFSRNLSEPRAIAVDPLRGFMY-----------WSDWGDQAKIE 566
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL + ++ G R+ +I
Sbjct: 567 KSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTLI 622
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLAKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D +G NR ++ + D ++ P G+
Sbjct: 576 QTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTLISSTDFLSHPFGIA 635
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 636 V----FEDKVFWTD 645
>gi|332809041|ref|XP_003308159.1| PREDICTED: low-density lipoprotein receptor-related protein 8
isoform 3 [Pan troglodytes]
Length = 697
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 153/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C +G C CP G L
Sbjct: 179 CVLAIKHCNQEQDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECACPAGFQLL 237
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ P CSQ+C N KG + C C GY ++ CKA + LI +N
Sbjct: 238 -DQKTCGDIDECKDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAAGKSPSLIFTN 296
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D + Q
Sbjct: 297 RHEVRRIDLVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPKEQ 356
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++++ L EGLA DW+ HIYW DS I V +G R L N+++PR + +D
Sbjct: 357 EVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRRTLFSRNLSEPRAIAVD 416
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG+ +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 417 PLRG--FMYWSDWGDQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 473
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 177/421 (42%), Gaps = 79/421 (18%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADE-GPGCDLAECK-HKFGLCSNTC--HPTPLGALCTCP 56
+ +CV + CDG+ DC GADE G L C+ +F TC CP
Sbjct: 134 TSHKCVPASWRCDGEKDCEGGADEAGCATSLGTCRGDEFQCGDGTCVLAIKHCNQEQDCP 193
Query: 57 PGEILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH-- 113
G S+++ Q +NEC G CS +CT+ K + C+C G+ L D TC I+
Sbjct: 194 DG---SDEAGCLQGLNECLHNNGGCSHICTDLKIGFECACPAGFQL-LDQKTCGDIDECK 249
Query: 114 --SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN 171
A I N + + D++ G + I + + +
Sbjct: 250 DPDACSQICVNYKGYFKCECYPGYE----MDLLTKNCKAAAGKSPSLIFTNRH----EVR 301
Query: 172 RIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN--- 228
RI++ N + I + K+ + LD T ++W D +I MD ++
Sbjct: 302 RIDLVKRNYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPK 354
Query: 229 -RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDE 287
+ +I +++ P GL +D + + +YW D
Sbjct: 355 EQEVLIDEQLHSPEGLAVDW------------------------------VHKHIYWTDS 384
Query: 288 GGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGE 345
G + + A +DG L S L E A+A+D G +Y W+DWG+
Sbjct: 385 GNKTISV----ATVDGGRRRTLFSRNLSEPRAIAVDPLRGFMY-----------WSDWGD 429
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL + ++ G R+ +
Sbjct: 430 QAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKML 489
Query: 406 I 406
I
Sbjct: 490 I 490
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL--AKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D +G NR +L + D ++ P G+
Sbjct: 444 QTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKMLISSTDFLSHPFGIA 503
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 504 VFEDK----VFWTD 513
>gi|449510118|ref|XP_004176584.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 1-like [Taeniopygia guttata]
Length = 4182
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/331 (35%), Positives = 171/331 (51%), Gaps = 60/331 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++++K+C+G DC +G+DEGP C LA C G C + C PT G +C C L+
Sbjct: 50 CIHMSKLCNGLHDCFDGSDEGPHCREQLANCS-ALG-CQHHCAPTLSGPVCYCNHSFQLA 107
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLI 119
D +C+D +EC G CSQ CTNT+GSY CSC EGY+L+ DN +CKA N L+
Sbjct: 108 EDRRSCRDFDECTVYGTCSQTCTNTEGSYTCSCVEGYLLQPDNRSCKAKNEPVDRPPVLL 167
Query: 120 ISNRHSILVADLE---------EKGKDHRAQDI--------------------------- 143
I+N +IL L K A D
Sbjct: 168 IANSQNILATYLSGAPVPNITPTSAKQTTAMDFNYVEDTVCWVHVGDSASQTILKCAKIP 227
Query: 144 ------------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI 191
+ L VE +A DW+ G+ Y++D +RI VC++NG + L +
Sbjct: 228 NLKGFVEERSINISLSLHHVEQMAIDWLTGNFYFVDDIDDRIFVCNKNGDTCVTLLDLEL 287
Query: 192 TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ R
Sbjct: 288 YNPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVNRL 345
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
VY+AD+ LD+I+ E K N TI + +
Sbjct: 346 VYWADAYLDYIEVVDYEGK---NRHTIIQGI 373
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 148/304 (48%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1120 CLPPEKLCDGSDDCGDGSDEGELCD--QCSLNNGGCSHNCTVAPGEGIVCSCPLGMELGA 1177
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K + CSC EG++LE D +C++++ F+I SNR
Sbjct: 1178 DNKTCQIQSYCAKHLKCSQKCEQDKYNVKCSCYEGWMLEPDGESCRSLDPFKPFIIFSNR 1237
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1238 HEIRRIDLHRGDYSVLVPGLRNTIALDFHLNQSSLYWTDVVEDKIYRGKLLENGALTSFE 1297
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1298 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMRTTLLAGDIEHPRAIALDP 1357
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIY--WPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G R TI WPNGLT+D +R+ + D++
Sbjct: 1358 RYGI--LFWTDWDASLPRIEAASMSGEGRRTIHKETGSGGWPNGLTVDYLEKRILWIDAR 1415
Query: 259 LDFI 262
D I
Sbjct: 1416 SDAI 1419
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 147/323 (45%), Gaps = 69/323 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLA----ECKHKFGLCSNTCH--PTPLGALCTCPP 57
+C++ C+ DC +G+DE C +C +C + H + + CTC
Sbjct: 3444 KCISANLRCNFFDDCGDGSDE-ESCSHEHKSYDCMTNSTMCGDEAHCVQSQSTSYCTCRR 3502
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G D CQD+NEC + G CSQ+C NTKGS++CSC + + ++ DN CKA
Sbjct: 3503 GFQKVPDKNFCQDINECLRFGTCSQLCNNTKGSHVCSCAKNF-MKTDN-MCKAEGSEHQI 3560
Query: 118 LIISNRHSIL------------------------VADLEEKG------------------ 135
L I++ + I D+ KG
Sbjct: 3561 LYIADDNKIRSMYPFNPNSAYEPAFQGDENVRIDAMDIYVKGNKIYWTNWHTGRISYREL 3620
Query: 136 -----------KDHRAQDIVVSGLDLV-----EGLAYDWIGGHIYWLDSRLNRIEVCDEN 179
++ R D V+ L++ G+A DW+ G+IYW DS + IEV
Sbjct: 3621 PTSSSASTASNRNRRQIDGGVTHLNISGLKMPRGIAIDWVAGNIYWTDSGRDVIEVAQMK 3680
Query: 180 GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYW 239
G NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++ I W
Sbjct: 3681 GENRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQDNIQW 3738
Query: 240 PNGLTLDIATRRVYFADSKLDFI 262
P GL +D R+Y+AD+KL I
Sbjct: 3739 PTGLAVDYHNERLYWADAKLSVI 3761
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 135/302 (44%), Gaps = 64/302 (21%)
Query: 63 NDSVTCQDMNECEQP-GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
++S+ N C Q G CSQ+C T + S C C GY L+ +C+ + +FL+
Sbjct: 1798 DESIQQAGTNPCSQNNGDCSQLCLPTSETSRSCMCTAGYSLKSGQQSCEGV---GSFLLY 1854
Query: 121 SNRHSILVADLEEKGKD----------------------------------HRA------ 140
S I L+ K RA
Sbjct: 1855 SVHEGIRGIPLDPNDKSDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTW 1914
Query: 141 -QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+D+V +G+ VEG+A DWI G+IYW D + IEV NG+ R V+ + +PR + +
Sbjct: 1915 REDVVTNGIGRVEGIAVDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITV 1974
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +LFWT+WG+ PRIER +DG+ R +++ I WPNG+++D ++Y+ D++
Sbjct: 1975 HPEKG--YLFWTEWGQYPRIERSRLDGTERMVLVNVSISWPNGISVDYEDGKLYWCDART 2032
Query: 260 DFIDCKSLEIKTN------------VNYSTIFRKLYWIDE-GGNGVPLKIGKANMDGSNA 306
D I+ LE N + S +YW D NG I + N D +
Sbjct: 2033 DKIERIDLETGENREVVLSSNNMDMFSVSVFEEYIYWSDRTHANG---SIKRGNKDNATE 2089
Query: 307 SI 308
S+
Sbjct: 2090 SV 2091
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 151/382 (39%), Gaps = 123/382 (32%)
Query: 76 QPGYCSQMCT--NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ S C C G+ L D +CK H FL+
Sbjct: 450 KPGGCSDICLLGNSHKSRTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 508
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 509 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 568
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 569 VEGIAVDWMGNNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 626
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P +IER MDGSNR+ I++K + WPNGL+LDI + +Y+ D+ D
Sbjct: 627 MYWTDWEEDPKDSKRGKIERAWMDGSNRNIFITSKTVLWPNGLSLDIPAKILYWVDAFYD 686
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
I+ L NG KI +YE L
Sbjct: 687 RIEMVYL----------------------NGTERKI-----------------VYEGQEL 707
Query: 321 DLENGMLYYSTLKCTRWLFWTDW-------------------GENPRIERIGMDGSNRST 361
+ G+ +YS LFWT++ E P I I M + +
Sbjct: 708 NHAFGLCHYSNF-----LFWTEYRSGSIYRLDQASKAVSLLRNERPPIFEIRMYDAQQQQ 762
Query: 362 IISTKIYWPNG--LTLDIATRR 381
+ S K NG +L +AT R
Sbjct: 763 VGSNKCRVNNGGCSSLCLATPR 784
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 107/233 (45%), Gaps = 25/233 (10%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++ +CD DC +G+DE C + EC K CS C +G C C PG L +
Sbjct: 2867 CISEALLCDNNNDCADGSDE-LNCFINECLNKKLSGCSQECEDLKIGYKCRCRPGFRLKD 2925
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D TC D++EC CSQ C NT GSY C C EGY + +
Sbjct: 2926 DGKTCIDIDECSTTYPCSQKCINTLGSYKCLCTEGY--------------NYLYWTDWGD 2971
Query: 124 HSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR 183
HS L+ + G + IV + + GL D+I IYW D+R + IE +G+NR
Sbjct: 2972 HS-LIGKIGMDGTNRSV--IVDTKITWPNGLTLDYINSRIYWADAREDYIEFASLDGSNR 3028
Query: 184 IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI-GMDGSNRSTIIST 235
+ +I + L +++WTDW E I R G+N++ +IST
Sbjct: 3029 HTVLSQDIPHIFALTL----FEDFIYWTDW-ETKSINRAHKTTGANKTLLIST 3076
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 59/85 (69%)
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
+L+WTDWG++ I +IGMDG+NRS I+ TKI WPNGLTLD R+Y+AD++ D+I+F +
Sbjct: 2963 YLYWTDWGDHSLIGKIGMDGTNRSVIVDTKITWPNGLTLDYINSRIYWADAREDYIEFAS 3022
Query: 397 YDGTGRQQVILIDLMVEFTNDLMGD 421
DG+ R V+ D+ F L D
Sbjct: 3023 LDGSNRHTVLSQDIPHIFALTLFED 3047
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 140/360 (38%), Gaps = 78/360 (21%)
Query: 84 CTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDI 143
C ++ + C+C G+ D + C+ IN F S
Sbjct: 3489 CVQSQSTSYCTCRRGFQKVPDKNFCQDINECLRFGTCSQ--------------------- 3527
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE-VCDENGTNRIVLAKDNITQPRGMM-LDP 201
L + G H+ + + +C G+ +L + + R M +P
Sbjct: 3528 ----------LCNNTKGSHVCSCAKNFMKTDNMCKAEGSEHQILYIADDNKIRSMYPFNP 3577
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA------ 255
+ F D EN RI+ + + + KIYW N T I+ R + +
Sbjct: 3578 NSAYEPAFQGD--ENVRIDAMDI------YVKGNKIYWTNWHTGRISYRELPTSSSASTA 3629
Query: 256 --------DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307
D + ++ L++ + + +YW D G + + + A M G N
Sbjct: 3630 SNRNRRQIDGGVTHLNISGLKMPRGIAIDWVAGNIYWTDSGRDVIEV----AQMKGENRK 3685
Query: 308 ILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
L+SG + E A+ +D G +Y W+DWG +P+IE MDG+ R T++
Sbjct: 3686 TLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMDGTLRETLVQD 3734
Query: 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID----LMVEFTNDLMGD 421
I WP GL +D R+Y+AD+KL I +GT V+ ID L F+ D+ D
Sbjct: 3735 NIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT--DPVVAIDNKRGLSHPFSIDIFED 3792
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 79/163 (48%), Gaps = 47/163 (28%)
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +L+WTDWG++ I +IGMDG+NRS I+ TKI WPNGLTLD R+Y+AD++ D+I+
Sbjct: 2960 GYNYLYWTDWGDHSLIGKIGMDGTNRSVIVDTKITWPNGLTLDYINSRIYWADAREDYIE 3019
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
A++DGSN ++S + AL L
Sbjct: 3020 ----------------------------------FASLDGSNRHTVLSQDIPHIFALTLF 3045
Query: 324 NGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIST 365
+Y WTDW E I R G+N++ +IST
Sbjct: 3046 EDFIY-----------WTDW-ETKSINRAHKTTGANKTLLIST 3076
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 131/336 (38%), Gaps = 62/336 (18%)
Query: 72 NECEQ---PGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL 127
N CE G CS +C N + C+C L+ DN TC FL+ + + I
Sbjct: 1499 NPCEANGGKGPCSHLCLINYNRTLSCACPHLMKLDKDNTTCYEFK---KFLLYARQMEIR 1555
Query: 128 VADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
D++ ++ V +D V + YD + IYW D R I+ NGT +
Sbjct: 1556 GVDIDNPYYNYIIS-FTVPDIDNVTVVDYDALEQRIYWSDVRTQTIKRAFINGTGVETVV 1614
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLD 246
++ G+ +D +R LFWT + N + I +DGS ++ +I
Sbjct: 1615 SADLPNAHGLSVDWV--SRNLFWTSYDANKKQINVARLDGSFKNAVI------------- 1659
Query: 247 IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
LD C + + KLYW D G N I ANMDGSN
Sbjct: 1660 ----------QGLDKPHCLVVH--------PLRGKLYWTD-GDN-----ISVANMDGSNR 1695
Query: 307 SILVSGQLYE-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
++L + Q LA+D LY W G N I R +DG N + S
Sbjct: 1696 TLLFTNQKGPVGLAIDYPESKLY-----------WISSG-NGTINRCDLDGGNLEVMESV 1743
Query: 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCN-YDGT 400
+ L I ++++AD + + CN DGT
Sbjct: 1744 RSQLSKATALAIMGDKLWWADQASERMGTCNKKDGT 1779
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 113/272 (41%), Gaps = 46/272 (16%)
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP------SPGTRWLFW 210
D+ G +Y + L I + DEN N + ++ + ++ S G+ +F+
Sbjct: 2155 DYDGYLLYSERTILKSIHLSDENNLNAPIKPFEDAEHMKNVIALAFDYRYGSKGSNRIFY 2214
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
+D I++I DG+ R TI+ + GL +Y+
Sbjct: 2215 SDI-HFGNIQQINDDGTGRKTIVEN-VGSVEGLAYHRGWDTLYW---------------- 2256
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
T+ STI R + +D+ G + M G + A LD
Sbjct: 2257 TSYTTSTITR--HTVDQSRVGAFERETVITMSGDDHP--------RAFVLD--------- 2297
Query: 331 TLKCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
+C +FWT+W E +P I R + G+N II I PNGL +D ++YF+D+ L
Sbjct: 2298 --ECQNLMFWTNWNEQHPSIMRATLSGANVLIIIDQDIRTPNGLAIDHKAEKIYFSDATL 2355
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
D I+ C YDG+ R ++ + + F + GD
Sbjct: 2356 DKIERCEYDGSHRHVILKSEPVHPFGLAVYGD 2387
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 112/273 (41%), Gaps = 59/273 (21%)
Query: 4 RCV-NLTKVCDGKTDCPNGADEGPG---CDLAE--CKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ N CDG+ DC + +DE P C E C F LC N C
Sbjct: 2820 RCLSNRQGECDGEFDCHDHSDEAPKNTRCSSPENKCNDSFFLCKNG----------NCIS 2869
Query: 58 GEILSNDSVTCQD--------MNEC--EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT 107
+L +++ C D +NEC ++ CSQ C + K Y C C G+ L+ D T
Sbjct: 2870 EALLCDNNNDCADGSDELNCFINECLNKKLSGCSQECEDLKIGYKCRCRPGFRLKDDGKT 2929
Query: 108 CKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD 167
C I+ + S + + + EG Y +YW D
Sbjct: 2930 CIDIDECSTTYPCSQKCINTLGSYK---------------CLCTEGYNY------LYWTD 2968
Query: 168 ----SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIG 223
S + +I + +GTNR V+ IT P G+ LD ++W D E+ IE
Sbjct: 2969 WGDHSLIGKIGM---DGTNRSVIVDTKITWPNGLTLDYI--NSRIYWADARED-YIEFAS 3022
Query: 224 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+DGSNR T++S I P+ L + +Y+ D
Sbjct: 3023 LDGSNRHTVLSQDI--PHIFALTLFEDFIYWTD 3053
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI--EVCDENGT-- 181
I ++++ D + +V + VEGLAY +YW + I D++
Sbjct: 2217 IHFGNIQQINDDGTGRKTIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQSRVGA 2276
Query: 182 --NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
V+ PR +LD +FWT+W E +P I R + G+N II I
Sbjct: 2277 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRATLSGANVLIIIDQDIR 2334
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2335 TPNGLAIDHKAEKIYFSDATLDKIE 2359
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 20/135 (14%)
Query: 279 FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTR 336
+ LYW D G + + IGK MDG+N S++V ++ L LD N +Y
Sbjct: 2961 YNYLYWTDWGDHSL---IGKIGMDGTNRSVIVDTKITWPNGLTLDYINSRIY-------- 3009
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
W D E+ IE +DGSNR T++S I P+ L + +Y+ D + I+
Sbjct: 3010 ---WADARED-YIEFASLDGSNRHTVLSQDI--PHIFALTLFEDFIYWTDWETKSINR-A 3062
Query: 397 YDGTGRQQVILIDLM 411
+ TG + +LI +
Sbjct: 3063 HKTTGANKTLLISTL 3077
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ + GLA D IY+ D+ L++IE C+ +G++R V+ K P G+ +
Sbjct: 2328 IIDQDIRTPNGLAIDHKAEKIYFSDATLDKIERCEYDGSHRHVILKSEPVHPFGLAV--- 2384
Query: 203 PGTRWLFWTDW 213
++FWTDW
Sbjct: 2385 -YGDYIFWTDW 2394
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 71/150 (47%), Gaps = 28/150 (18%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S+L +WTD E+ +I R +
Sbjct: 1239 EIRRIDLHRGDYSVLVPG-LRNTIALDFH---LNQSSL------YWTDVVED-KIYRGKL 1287
Query: 355 --DGSNRS--TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+G+ S +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1288 LENGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMR-------- 1339
Query: 411 MVEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD G+L+++
Sbjct: 1340 ----TTLLAGDIEHPRAIALDPRYGILFWT 1365
>gi|385251933|pdb|3V65|B Chain B, Crystal Structure Of Agrin And Lrp4 Complex
gi|385251934|pdb|3V65|D Chain D, Crystal Structure Of Agrin And Lrp4 Complex
Length = 386
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 175/385 (45%), Gaps = 91/385 (23%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYI 92
C G C+ C CTC G L+ D TCQD+NEC + GYCSQ CTN++G++
Sbjct: 6 CNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQ 65
Query: 93 CSCNEGYVLEYDNHTCKAINHSAAFLIISNR------------HSILVADLEEKGK---D 137
C C GY L D +CKA+ L+ +NR +++L+ +LE
Sbjct: 66 CWCEAGYELRPDRRSCKALG-PEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFH 124
Query: 138 HR-----------------------AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
HR +++V +GL+ GLA DW+ +YW DS +RIE
Sbjct: 125 HRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIE 184
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V + +G +R VL ++ +PR + L P GT ++WTDWG PRIE MDGS R I
Sbjct: 185 VANLDGAHRKVLLWQSLEKPRAIALHPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIAD 242
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
T ++WPNGLT+D A RR+Y+ D+K I+
Sbjct: 243 THLFWPNGLTIDYAGRRMYWVDAKHHVIE------------------------------- 271
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+AN+DGS+ ++S L A+ + LY WTDW
Sbjct: 272 ---RANLDGSHRKAVISQGLPHPFAITVFEDSLY-----------WTDWHTKSINSANKF 317
Query: 355 DGSNRSTIISTKIYWPNGLTLDIAT 379
G N+ II K+++P +DI T
Sbjct: 318 TGKNQE-IIRNKLHFP----MDIHT 337
>gi|301603656|ref|XP_002931503.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
[Xenopus (Silurana) tropicalis]
Length = 940
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/337 (33%), Positives = 166/337 (49%), Gaps = 55/337 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ TKVCDG DC + +DE CD+ EC G CS+ C +G C CP G L
Sbjct: 332 ECIDSTKVCDGNKDCRDWSDESLTACDINECMVNNGGCSHICRDLKVGYECDCPVGYKLM 391
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG + C C EGY ++ + TCKA+ + +LI +N
Sbjct: 392 -DKKTCGDIDECENPDACSQICVNYKGDFKCECYEGYEMDSVSKTCKAVGQN-PYLIFTN 449
Query: 123 RHSILVADLEEKGKDH------------------------------------RAQD---- 142
RH + D+ + RA D
Sbjct: 450 RHELRQIDIVHRDYSRLAAQLKNVVSLDVEVTSRMIYWCDLYYRRIYSAPLDRAADPSEH 509
Query: 143 --IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
I+ + L EGLA DWI +IYW DS I V +G R L ++ + +PR + +D
Sbjct: 510 VVIINTTLHSPEGLAIDWIHKNIYWTDSGNKTISVATADGCKRKTLFRNGLGEPRAIAVD 569
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G ++FW+DWG+ +IE+ G++G +R ++S I WPNG+TLD+ R+Y+ DSKL
Sbjct: 570 PVQG--FMFWSDWGDPAKIEKAGLNGGDRQVLVSDNIEWPNGITLDVLGCRLYWVDSKLH 627
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
+ ++V+++ RKL E P +
Sbjct: 628 TL--------SSVDFNGFNRKLLISSEDSLSHPFGLA 656
>gi|397487993|ref|XP_003815060.1| PREDICTED: low-density lipoprotein receptor-related protein 8
isoform 2 [Pan paniscus]
Length = 700
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 153/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C +G C CP G L
Sbjct: 182 CVLAIKHCNQEQDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECACPAGFQLL 240
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ P CSQ+C N KG + C C GY ++ CKA + LI +N
Sbjct: 241 -DQKTCGDIDECKDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAAGKSPSLIFTN 299
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D + Q
Sbjct: 300 RHEVRRIDLVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPKEQ 359
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++++ L EGLA DW+ HIYW DS I V +G R L N+++PR + +D
Sbjct: 360 EVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRRTLFSRNLSEPRAIAVD 419
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG+ +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 420 PLRG--FMYWSDWGDQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 476
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 178/422 (42%), Gaps = 81/422 (19%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGC--DLAECK-HKFGLCSNTC--HPTPLGALCTC 55
+ +CV + CDG+ DC GADE GC L C+ +F TC C
Sbjct: 137 TSHKCVPASWRCDGEKDCEGGADEA-GCATSLGTCRGDEFQCGDGTCVLAIKHCNQEQDC 195
Query: 56 PPGEILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH- 113
P G S+++ Q +NEC G CS +CT+ K + C+C G+ L D TC I+
Sbjct: 196 PDG---SDEAGCLQGLNECLHNNGGCSHICTDLKIGFECACPAGFQL-LDQKTCGDIDEC 251
Query: 114 ---SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL 170
A I N + + D++ G + I + + +
Sbjct: 252 KDPDACSQICVNYKGYFKCECYPGYE----MDLLTKNCKAAAGKSPSLIFTNRH----EV 303
Query: 171 NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN-- 228
RI++ N + I + K+ + LD T ++W D +I MD ++
Sbjct: 304 RRIDLVKRNYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDP 356
Query: 229 --RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWID 286
+ +I +++ P GL +D + + +YW D
Sbjct: 357 KEQEVLIDEQLHSPEGLAVDW------------------------------VHKHIYWTD 386
Query: 287 EGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWG 344
G + + A +DG L S L E A+A+D G +Y W+DWG
Sbjct: 387 SGNKTISV----ATVDGGRRRTLFSRNLSEPRAIAVDPLRGFMY-----------WSDWG 431
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
+ +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL + ++ G R+
Sbjct: 432 DQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKM 491
Query: 405 VI 406
+I
Sbjct: 492 LI 493
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL--AKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D +G NR +L + D ++ P G+
Sbjct: 447 QTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKMLISSTDFLSHPFGIA 506
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 507 VFEDK----VFWTD 516
>gi|297664884|ref|XP_002810849.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 8 [Pongo abelii]
Length = 959
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 153/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 306 CVLAIKRCNQEQDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL 364
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ P CSQ+C N KG + C C GY ++ CKA + LI +N
Sbjct: 365 -DQKTCGDIDECKDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAAGKSPSLIFTN 423
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D + Q
Sbjct: 424 RHEVRRIDLVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPKEQ 483
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+++ L EGLA DW+ HIYW DS I V +G R L N+++PR + +D
Sbjct: 484 KVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRRTLFSRNLSEPRAIAVD 543
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG+ +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 544 PLRG--FMYWSDWGDQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 600
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 174/416 (41%), Gaps = 79/416 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTC--HPTPLGALCTCPPGEIL 61
CV+L CDG DC + +DE C L C+ +F TC CP G
Sbjct: 267 CVHLGWRCDGDRDCKDKSDEA-NCPLGTCRGDEFQCGDGTCVLAIKRCNQEQDCPDG--- 322
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SAA 116
S+++ Q +NEC G CS +CT+ K + C+C G+ L D TC I+ A
Sbjct: 323 SDEAGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGDIDECKDPDAC 381
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
I N + + D++ G + I + + + RI++
Sbjct: 382 SQICVNYKGYFKCECYPGYE----MDLLTKNCKAAAGKSPSLIFTNRH----EVRRIDLV 433
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RSTI 232
N + I + K+ + LD T ++W D +I MD ++ + +
Sbjct: 434 KRNYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPKEQKVL 486
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
I +++ P GL +D + + +YW D G
Sbjct: 487 IDEQLHSPEGLAVDW------------------------------VHKHIYWTDSGNK-- 514
Query: 293 PLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
I A +DG L S L E A+A+D G +Y W+DWG+ +IE
Sbjct: 515 --TISVATVDGGRRRTLFSRNLSEPRAIAVDPLRGFMY-----------WSDWGDQAKIE 561
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL + ++ G R+ +I
Sbjct: 562 KSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKMLI 617
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL--AKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D +G NR +L + D ++ P G+
Sbjct: 571 QTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKMLISSTDFLSHPFGIA 630
Query: 199 LDPSPGTRWLFWTD 212
+ R +FWTD
Sbjct: 631 VF---EVRQVFWTD 641
>gi|387604224|gb|AFJ93120.1| low density lipoprotein receptor-related protein 8 transcript
variant 1 [Anas platyrhynchos]
Length = 917
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 156/304 (51%), Gaps = 47/304 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ KVCD DC + +DE C + EC G CS+ C +G C CPPG L
Sbjct: 325 ECIDGGKVCDSHKDCRDWSDEPLKECGINECSMNNGGCSHICKDLKIGYECECPPGYKLL 384
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG Y C C EGY ++ + CKA+ S +LI +N
Sbjct: 385 -DKKTCGDIDECENPDACSQICINYKGDYKCECYEGYEMDTLSKNCKAVGKS-PYLIFTN 442
Query: 123 RHSILVADLE-----------------------------------------EKGKDHRAQ 141
RH + DL +K D Q
Sbjct: 443 RHEVRKIDLVKRDYSRIIPMLKNVVALDVEVATNRIYWCDLFYRKIYSAYIDKASDTAEQ 502
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
I++ S L+ EGLA DW+ +IYW DS I V +G+ R L ++++PR + +D
Sbjct: 503 VILIDSQLNSPEGLAIDWVHKNIYWTDSGNKTISVATADGSRRRTLFNRDLSEPRAIAVD 562
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ R+++W+DWG+ +IE+ G++G R +++ I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 563 PT--RRFMYWSDWGDKAKIEKAGLNGVGRRVLVADNIEWPNGITLDLLNQRLYWVDSKLH 620
Query: 261 FIDC 264
+ C
Sbjct: 621 SLSC 624
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 182/446 (40%), Gaps = 73/446 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC---DLAECKHKFGLCSNTCHPTPLGALC-TCPPGEI 60
C++ K CD DCP+ +DE GC E KF S C G +C +
Sbjct: 285 CIHGAKQCDKVHDCPDNSDEA-GCVQESACESPSKFQCKSGEC--IDGGKVCDSHKDCRD 341
Query: 61 LSNDSVTCQDMNECE-QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI 119
S++ + +NEC G CS +C + K Y C C GY L D TC I+
Sbjct: 342 WSDEPLKECGINECSMNNGGCSHICKDLKIGYECECPPGYKL-LDKKTCGDIDECENPDA 400
Query: 120 ISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDEN 179
S D + + + D + V Y I+ + +I++ +
Sbjct: 401 CSQICINYKGDYKCECYEGYEMDTLSKNCKAVGKSPY-----LIFTNRHEVRKIDLVKRD 455
Query: 180 GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE----NPRIERIGMDGSNRSTIIST 235
+ I + K+ + LD T ++W D + I++ D + + +I +
Sbjct: 456 YSRIIPMLKNVVA------LDVEVATNRIYWCDLFYRKIYSAYIDK-ASDTAEQVILIDS 508
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
++ P GL +D + + +YW D G + +
Sbjct: 509 QLNSPEGLAIDW------------------------------VHKNIYWTDSGNKTISV- 537
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A DGS L + L E A+ ++ R+++W+DWG+ +IE+ G++
Sbjct: 538 ---ATADGSRRRTLFNRDLSEPRAIAVDPTR---------RFMYWSDWGDKAKIEKAGLN 585
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI--LIDLMVE 413
G R +++ I WPNG+TLD+ +R+Y+ DSKL + +++G+ R+ +I + DL
Sbjct: 586 GVGRRVLVADNIEWPNGITLDLLNQRLYWVDSKLHSLSCIDFNGSNRKVLISSVDDLSHP 645
Query: 414 FTNDLMGDNGVPALALDLENGMLYYS 439
F + D DLEN ++ +
Sbjct: 646 FGLAVFEDR---VFWTDLENEAIFSA 668
>gi|401709449|gb|AFN22071.2| low density lipoprotein receptor-related protein 8 [Anas
platyrhynchos]
Length = 917
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 156/304 (51%), Gaps = 47/304 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ KVCD DC + +DE C + EC G CS+ C +G C CPPG L
Sbjct: 325 ECIDGGKVCDSHKDCRDWSDEPLKECGINECSMNNGGCSHICKDLKIGYECECPPGYKLL 384
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG Y C C EGY ++ + CKA+ S +LI +N
Sbjct: 385 -DKKTCGDIDECENPDACSQICINYKGDYKCECYEGYEMDTLSKNCKAVGKS-PYLIFTN 442
Query: 123 RHSILVADLE-----------------------------------------EKGKDHRAQ 141
RH + DL +K D Q
Sbjct: 443 RHEVRKIDLVKRDYSRIIPMLKNVVALDVEVATNRIYWCDLFYRKIYSAYIDKASDTAEQ 502
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
I++ S L+ EGLA DW+ +IYW DS I V +G+ R L ++++PR + +D
Sbjct: 503 VILIDSQLNSPEGLAIDWVHKNIYWTDSGNKTISVATADGSRRRTLFNRDLSEPRAIAVD 562
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ R+++W+DWG+ +IE+ G++G R +++ I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 563 PT--RRFMYWSDWGDKAKIEKAGLNGVGRRVLVADNIEWPNGITLDLLNQRLYWVDSKLH 620
Query: 261 FIDC 264
+ C
Sbjct: 621 SLSC 624
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 182/446 (40%), Gaps = 73/446 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC---DLAECKHKFGLCSNTCHPTPLGALC-TCPPGEI 60
C++ K CD DCP+ +DE GC E KF S C G +C +
Sbjct: 285 CIHGAKQCDKVHDCPDNSDEA-GCVQESACESPSKFQCKSGEC--IDGGKVCDSHKDCRD 341
Query: 61 LSNDSVTCQDMNECE-QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI 119
S++ + +NEC G CS +C + K Y C C GY L D TC I+
Sbjct: 342 WSDEPLKECGINECSMNNGGCSHICKDLKIGYECECPPGYKL-LDKKTCGDIDECENPDA 400
Query: 120 ISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDEN 179
S D + + + D + V Y I+ + +I++ +
Sbjct: 401 CSQICINYKGDYKCECYEGYEMDTLSKNCKAVGKSPY-----LIFTNRHEVRKIDLVKRD 455
Query: 180 GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE----NPRIERIGMDGSNRSTIIST 235
+ I + K+ + LD T ++W D + I++ D + + +I +
Sbjct: 456 YSRIIPMLKNVVA------LDVEVATNRIYWCDLFYRKIYSAYIDK-ASDTAEQVILIDS 508
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
++ P GL +D + + +YW D G + +
Sbjct: 509 QLNSPEGLAIDW------------------------------VHKNIYWTDSGNKTISV- 537
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A DGS L + L E A+ ++ R+++W+DWG+ +IE+ G++
Sbjct: 538 ---ATADGSRRRTLFNRDLSEPRAIAVDPTR---------RFMYWSDWGDKAKIEKAGLN 585
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI--LIDLMVE 413
G R +++ I WPNG+TLD+ +R+Y+ DSKL + +++G+ R+ +I + DL
Sbjct: 586 GVGRRVLVADNIEWPNGITLDLLNQRLYWVDSKLHSLSCIDFNGSNRKVLISSVDDLSHP 645
Query: 414 FTNDLMGDNGVPALALDLENGMLYYS 439
F + D DLEN ++ +
Sbjct: 646 FGLAVFEDR---VFWTDLENEAIFSA 668
>gi|344278682|ref|XP_003411122.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
isoform 1 [Loxodonta africana]
Length = 695
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 153/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DC +G+DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 177 CVPAIKRCNQEKDCADGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFRLL 235
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG + C C+ GY ++ CKA+ + LI +N
Sbjct: 236 -DQKTCGDIDECEDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAVAGKSPSLIFTN 294
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D Q
Sbjct: 295 RHEVRRIDLVKRDYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPAEQ 354
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++++ L EGLA DW+ HIYW DS I V +G+ R L ++++PR + +D
Sbjct: 355 EVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGSRRRTLFSQDLSEPRAISVD 414
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG +IE+ G++G +R T++S I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 415 PLRG--FMYWSDWGYQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLNQRLYWVDSKL 471
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 173/427 (40%), Gaps = 91/427 (21%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
+ +CV + CDG+ DC +GADE A C G C GA C P
Sbjct: 132 TSHKCVPASWRCDGEKDCESGADE------AGCASSLGTCRGDEFQCEDGA---CVPAIK 182
Query: 61 LSNDSVTCQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
N C D +NEC G CS +CT+ K + C+C G+ L D TC
Sbjct: 183 RCNQEKDCADGSDEAGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFRL-LDQKTCG 241
Query: 110 AINH----SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYW 165
I+ A I N + + D + V G + I + +
Sbjct: 242 DIDECEDPDACSQICVNYKGYFKCECHPGYE----MDTLTKNCKAVAGKSPSLIFTNRH- 296
Query: 166 LDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD 225
+ RI++ + + I + K+ + LD T ++W D +I MD
Sbjct: 297 ---EVRRIDLVKRDYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMD 346
Query: 226 GSN----RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRK 281
++ + +I +++ P GL +D + +
Sbjct: 347 KASDPAEQEVLIDEQLHSPEGLAVDW------------------------------VHKH 376
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLF 339
+YW D G + + A +DGS L S L E A+++D G +Y
Sbjct: 377 IYWTDSGNKTISV----ATVDGSRRRTLFSQDLSEPRAISVDPLRGFMY----------- 421
Query: 340 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
W+DWG +IE+ G++G +R T++S I WPNG+TLD+ +R+Y+ DSKL + +++G
Sbjct: 422 WSDWGYQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLNQRLYWVDSKLHQLSSIDFNG 481
Query: 400 TGRQQVI 406
R+ +I
Sbjct: 482 GNRKMLI 488
>gi|307206924|gb|EFN84770.1| Putative vitellogenin receptor [Harpegnathos saltator]
Length = 2292
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 113/331 (34%), Positives = 165/331 (49%), Gaps = 51/331 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
RC++L+ VC+GK +C +G+DEG GC + CS+ C TP G +CTC G IL
Sbjct: 154 RCISLSTVCNGKDNCGDGSDEGVGCKNSTMSCASMGCSDMCRMTPNGPVCTCRAGYILQ- 212
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL----- 118
D+ TC D++EC G C Q C NTKGSY C C GY+L D TC+A A +
Sbjct: 213 DNRTCIDIDECAIYGTCDQRCINTKGSYKCICQTGYMLLDDMRTCRADGGEATMIYSTTT 272
Query: 119 ------------------------IISNRHSILVADLEE------KGKDHRAQD--IVVS 146
+ N+ I +++ + K K +R ++ I +
Sbjct: 273 KIRGVYLTSGMYFTAVRNLSHVVGVAMNKDYIYWSEVAQGNEAIVKSKLYRRKNEVIATA 332
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTR 206
GLD++ +A DWI G+IY+ D RI VCD NGT VL + I +P+G+ L P+ G
Sbjct: 333 GLDVLTDIAVDWITGNIYFTDEGYARIGVCDNNGTYCTVLINEQINKPKGLALLPNKGI- 391
Query: 207 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKS 266
++W+DWG N I GMDG N ++ I WP +T+D R+Y+ D+KL ++
Sbjct: 392 -MYWSDWGPNAHIAMAGMDGKNSHLFVTKNIKWPISVTIDYPNNRLYWVDAKLAVVESIR 450
Query: 267 LE-----------IKTNVNYSTIFRKLYWID 286
L+ I+ + + KLYW D
Sbjct: 451 LDGSDRRTVLHELIQHPFSLAVFENKLYWSD 481
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 176/380 (46%), Gaps = 79/380 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ +KVCDG DCP+G+DE C A + C CH TP G +C C G L+ D
Sbjct: 1180 CLPFSKVCDGVQDCPDGSDEQEKC--ATSCMQNNRCHGLCHKTPRGGVCGCVKGYRLAAD 1237
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
V+C ++NECE CSQ+C N+ GS++CSC +GY++ D +CKAI + ++R
Sbjct: 1238 MVSCDEINECEH-DVCSQLCHNSAGSFVCSCFDGYIIRDDKISCKAIGPPMELIAATDR- 1295
Query: 125 SILVADLEEKGKDHRAQDIV-------VSGLDL--------------------------- 150
D+ + + ++ D++ VSGLD+
Sbjct: 1296 -----DIRKISSNAQSIDVIYSLPGLSVSGLDVNAIDDAIYWSNDNLGTINKLNVKTKES 1350
Query: 151 --------VEGLAYDWIGGHIYWLD-SRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLD 200
E LA DWI +IY+ D +R N I+VC+ E G + + + + + +D
Sbjct: 1351 KFVTSVGNPEALAVDWITNNIYFNDNNRPNTIKVCNLEQGKCATIATMEGVGKVTALAVD 1410
Query: 201 PSPGTRWLFW--TDWG--ENP--RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
P RWLFW T+W NP I + M GSN I S + +G+ +D ++Y+
Sbjct: 1411 PK--NRWLFWSQTNWQMYNNPFSEIYQTDMMGSNMKIIASRNVGVVSGMAIDRMKSKLYW 1468
Query: 255 ADSKLDFIDCKSLE-------IKTNV----NYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
DS I+ +L+ +KT++ + + LYW+ G NG ++ K + G
Sbjct: 1469 TDSFYRTIESSNLDGTGRSTFLKTDIYRPLSINIYENSLYWL-MGSNG---QLQKCQLYG 1524
Query: 304 SNASILV---SGQLYEALAL 320
LV S +Y+ A+
Sbjct: 1525 EKLCELVNLGSANIYKHFAI 1544
>gi|426218727|ref|XP_004003589.1| PREDICTED: low-density lipoprotein receptor-related protein 8 [Ovis
aries]
Length = 959
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 151/298 (50%), Gaps = 46/298 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CV+ KVCD + DC + +DE C L EC H G CS+ C +G CTCP G L
Sbjct: 307 CVDGRKVCDAQRDCRDWSDEPLKECGLNECLHNNGGCSHICTDLKIGFECTCPAGYQLL- 365
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D TC D++ECE P CSQ+C N KG + C C+ GY ++ CKA+ + LI +NR
Sbjct: 366 DQKTCGDIDECEDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAVAGRSPSLIFTNR 425
Query: 124 HSILVADL-----------------------------------------EEKGKDHRAQD 142
H + DL +K + QD
Sbjct: 426 HEVRRIDLVKRDYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASNPVEQD 485
Query: 143 IVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+++ L EGLA DW+ HIYW DS I V +G R L N+++PR + +DP
Sbjct: 486 VLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGKRRCTLFSRNLSEPRAIAVDP 545
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++W+DWG +IE+ G++G R T++S I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 546 LRG--FMYWSDWGFQAKIEKSGLNGVGRQTLVSDGIEWPNGITLDLLNQRLYWVDSKL 601
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 172/426 (40%), Gaps = 97/426 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT---CPPGEIL 61
CV K C+ + DCP+G+DE GC L +TC P C C G +
Sbjct: 266 CVPAIKRCNQEQDCPDGSDET-GC----------LQESTCE-GPRRFQCKSGECVDGRKV 313
Query: 62 SNDSVTCQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110
+ C+D +NEC G CS +CT+ K + C+C GY L D TC
Sbjct: 314 CDAQRDCRDWSDEPLKECGLNECLHNNGGCSHICTDLKIGFECTCPAGYQL-LDQKTCGD 372
Query: 111 INH----SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
I+ A I N + + D + V G + I + +
Sbjct: 373 IDECEDPDACSQICVNYKGYFKCECHPGYE----MDTLTKNCKAVAGRSPSLIFTNRH-- 426
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226
+ RI++ + + I + K+ + LD T ++W D +I MD
Sbjct: 427 --EVRRIDLVKRDYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDK 477
Query: 227 SN----RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
++ + +I +++ P GL +D + + +
Sbjct: 478 ASNPVEQDVLIDEQLHSPEGLAVDW------------------------------VHKHI 507
Query: 283 YWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFW 340
YW D G I A +DG L S L E A+A+D G +Y W
Sbjct: 508 YWTDSGNK----TISVATVDGKRRCTLFSRNLSEPRAIAVDPLRGFMY-----------W 552
Query: 341 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
+DWG +IE+ G++G R T++S I WPNG+TLD+ +R+Y+ DSKL + +++G
Sbjct: 553 SDWGFQAKIEKSGLNGVGRQTLVSDGIEWPNGITLDLLNQRLYWVDSKLHQLSSIDFNGG 612
Query: 401 GRQQVI 406
R+ +I
Sbjct: 613 NRKMLI 618
>gi|348529790|ref|XP_003452395.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
[Oreochromis niloticus]
Length = 824
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 107/301 (35%), Positives = 152/301 (50%), Gaps = 46/301 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ +KVCD DC + +DE C L EC G CS+ C +G C CP G L
Sbjct: 307 ECIDSSKVCDNVKDCKDWSDEPVKECGLNECTDNNGGCSHICKDQRIGYECDCPSGYKLL 366
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG Y C C EGY ++ + TCKA+ S +L+ +N
Sbjct: 367 -DKKTCGDIDECENPDACSQICINYKGDYKCECYEGYEMDPASKTCKAVGKS-PYLLFTN 424
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH I +V L+ K D Q
Sbjct: 425 RHEIRRIHLLKSEYTQVVPTLKNAVALDVDVSTNKMFWCDLYHQKIYSAYINKASDSSQQ 484
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ L EGLA DW+ +IYW DS I V +G R +L + +PR + +DP
Sbjct: 485 VTLIDSLHSPEGLAVDWVHKNIYWTDSGNKSISVATGDGRKRKMLITTELNEPRAIAVDP 544
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++W+DWG +IE+ GM+G +R ++S I WPNG+TLD++ RR+Y+ DSKL
Sbjct: 545 HQG--FMYWSDWGGQAKIEKAGMNGVDRQILVSEHIEWPNGITLDLSNRRLYWVDSKLHL 602
Query: 262 I 262
+
Sbjct: 603 L 603
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 174/430 (40%), Gaps = 107/430 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC--KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ TK C+ DCP+ +DE ++ +C KF C GE +
Sbjct: 267 CIHGTKQCNKVHDCPDYSDEAGCVNVTKCDGPKKF----------------RCKNGECID 310
Query: 63 NDSVT-----CQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH 106
+ V C+D +NEC + G CS +C + + Y C C GY L D
Sbjct: 311 SSKVCDNVKDCKDWSDEPVKECGLNECTDNNGGCSHICKDQRIGYECDCPSGYKL-LDKK 369
Query: 107 TCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
TC I+ N + + KG D++ + +D +G Y L
Sbjct: 370 TCGDIDE------CENPDACSQICINYKG-DYKCECYEGYEMDPASKTCK-AVGKSPYLL 421
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQ-----PRGMMLDPSPGTRWLFWTDWGENPRIER 221
+ NR E+ RI L K TQ + LD T +FW D
Sbjct: 422 FT--NRHEI------RRIHLLKSEYTQVVPTLKNAVALDVDVSTNKMFWCDLYHQKIYSA 473
Query: 222 I---GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
D S + T+I + ++ P GL +D +
Sbjct: 474 YINKASDSSQQVTLIDS-LHSPEGLAVDW------------------------------V 502
Query: 279 FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTR 336
+ +YW D G + + G DG +L++ +L E A+A+D G +Y
Sbjct: 503 HKNIYWTDSGNKSISVATG----DGRKRKMLITTELNEPRAIAVDPHQGFMY-------- 550
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
W+DWG +IE+ GM+G +R ++S I WPNG+TLD++ RR+Y+ DSKL + +
Sbjct: 551 ---WSDWGGQAKIEKAGMNGVDRQILVSEHIEWPNGITLDLSNRRLYWVDSKLHLLSSVD 607
Query: 397 YDGTGRQQVI 406
++G R+ ++
Sbjct: 608 FNGDNRKVLL 617
>gi|196008921|ref|XP_002114326.1| hypothetical protein TRIADDRAFT_27379 [Trichoplax adhaerens]
gi|190583345|gb|EDV23416.1| hypothetical protein TRIADDRAFT_27379 [Trichoplax adhaerens]
Length = 718
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 197/426 (46%), Gaps = 93/426 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+++ VC+GK DC + +DE C++ EC G CS C T +G C C PG L D
Sbjct: 295 CISMKLVCNGKFDCEDKSDEPATCNINECSEYNGHCSQNCVNTKVGYYCACNPGYTLDTD 354
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAA-------- 116
TC D+NEC CSQMC NTKGSY C+C +GY L+ D +CKA+
Sbjct: 355 GRTCLDINECNISNPCSQMCENTKGSYKCTCADGYRLDADFKSCKALGPEPVLFFANRRD 414
Query: 117 ---FLIISNRHSILVADL----------------------EEKGK---------DHRAQD 142
F I +R++ ++ L E+ G+ + +
Sbjct: 415 IHRFTIKGSRYNDVMKGLKGAIGIDVHVRKRLLFWTDIVSEKIGRVTLHSNGTVAGKNKY 474
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ G+ E +A DWI IYW D+ L+ I++ D +G + NI PRG+ +DP
Sbjct: 475 IISDGVLSPECVAVDWIHDTIYWTDTGLDAIKMSDLDG-RYVKTIISNIADPRGLAVDPV 533
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G ++++TDWG + +IER +DG+ R ++ST + WPNGLT+D R++Y+ D K I
Sbjct: 534 DG--YIYFTDWGSSAKIERAKLDGTQRQILVSTNVEWPNGLTIDYPQRKMYWVDGKHHHI 591
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+ AN+DGS +++S + ++ +
Sbjct: 592 E----------------------------------SANLDGSGRRVILSKGIPHPFSITV 617
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIG-MDGSNRSTIISTKIYWPNGLTLDIATRR 381
+Y WTDW E+ +E + G+NRS ++S +Y P G+T R+
Sbjct: 618 FENSVY-----------WTDW-ESKTVETANKLTGANRSVLLS-DLYAPMGITTFQLQRQ 664
Query: 382 VYFADS 387
D+
Sbjct: 665 PRHYDA 670
>gi|307195306|gb|EFN77254.1| Very low-density lipoprotein receptor [Harpegnathos saltator]
Length = 903
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 117/299 (39%), Positives = 151/299 (50%), Gaps = 45/299 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L VCD DC DE C + EC G CS C P+G C C G L
Sbjct: 350 CIPLEHVCDKNPDCIGWEDESIQYCGVNECAKNNGGCSQICVDLPIGYRCDCNAGYRLI- 408
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D+ TC D+NEC +PG CSQ C N KGS+ CSC GY+ + N T CKA A+ L+ +
Sbjct: 409 DNRTCDDINECLEPGSCSQFCKNEKGSFKCSCAAGYLKDPRNLTRCKAAEGHAS-LLFAR 467
Query: 123 RHS--------------------------------ILVADLEEKG-----KDHRAQDIVV 145
RH I +D+ EK D + VV
Sbjct: 468 RHDIRKVALDRQEMTAIVNNTKMATALDFVFRTGMIFWSDISEKKIYKAPIDEGNERTVV 527
Query: 146 SGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
DL +GLA DWI HIYW DS + I++ + G R L +D I +PR + L+P
Sbjct: 528 IENDLTTSDGLAVDWIYSHIYWTDSGKDTIQLANFEGNMRKTLIQDRIQEPRAIALNPLE 587
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G W+FWTDW + RIER GMDGS+RS I+ + WPNGL LD+ +RVY+ D+KL+ I
Sbjct: 588 G--WMFWTDWSDEARIERAGMDGSHRSVIVGNDVKWPNGLALDLIGKRVYWVDAKLNII 644
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 296 IGKANMDGSNASILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
I K +D + +V+ ++ AL GM+ FW+D E +I + +
Sbjct: 471 IRKVALDRQEMTAIVNNTKMATALDFVFRTGMI-----------FWSDISEK-KIYKAPI 518
Query: 355 D-GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
D G+ R+ +I + +GL +D +Y+ DS D I N++G R+ +I
Sbjct: 519 DEGNERTVVIENDLTTSDGLAVDWIYSHIYWTDSGKDTIQLANFEGNMRKTLI 571
>gi|395512552|ref|XP_003760500.1| PREDICTED: low-density lipoprotein receptor [Sarcophilus harrisii]
Length = 863
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 156/302 (51%), Gaps = 46/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ KVC+G DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 291 ECISFDKVCNGPRDCRDWSDEPIKECGTNECLDNKGGCSHICNDLKIGYECLCPEGFRLV 350
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC+ P CSQ C N +GSY C CNEGY + TCKAI + A+L +N
Sbjct: 351 -DQKRCEDIDECQNPDICSQSCVNLQGSYKCECNEGYQTDPITKTCKAIAGTIAYLFFTN 409
Query: 123 RHSI-------------------LVA-------------DLEEK---------GKDHRAQ 141
RH + +VA DL +K
Sbjct: 410 RHEVRKMTLDRSEYISLIPNLKNVVALDMEVASNKIYWSDLSQKKIYSSEIDSAHSFSTH 469
Query: 142 DIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D V+SG + +G+A DWI G++YW DS L I V + G+ R L K +PR +++D
Sbjct: 470 DTVISGDIQAPDGIAVDWIHGNLYWTDSVLGTISVANTKGSKRKTLFKQEGAKPRAIVVD 529
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +IE+ G++G + +++ I WPNG+TLD+++ R+Y+ DSKL
Sbjct: 530 PVHG--FMYWTDWGTPAKIEKSGLNGVDSFPLVTENIQWPNGITLDLSSERLYWVDSKLH 587
Query: 261 FI 262
I
Sbjct: 588 SI 589
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 171/418 (40%), Gaps = 74/418 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGC---DLAECKHKFGLCSNTCHPTPLGALCTCPPG-E 59
CV+ ++ C+ + DC + +DE GC L E KF S C +C P
Sbjct: 250 ECVHGSRQCNKEYDCKDMSDEM-GCVNVTLCEGPDKFKCHSGEC--ISFDKVCNGPRDCR 306
Query: 60 ILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL 118
S++ + NEC + G CS +C + K Y C C EG+ L D C+ I+
Sbjct: 307 DWSDEPIKECGTNECLDNKGGCSHICNDLKIGYECLCPEGFRL-VDQKRCEDIDECQNPD 365
Query: 119 IISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEG-LAYDWIGGHIYWLDSRLNRIEVCD 177
I S L + + + D + + G +AY +++ + R D
Sbjct: 366 ICSQSCVNLQGSYKCECNEGYQTDPITKTCKAIAGTIAY------LFFTNRHEVRKMTLD 419
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG----SNRSTII 233
+ ++ N+ + LD + ++W+D + +I +D S T+I
Sbjct: 420 RSEYISLIPNLKNV-----VALDMEVASNKIYWSDLSQK-KIYSSEIDSAHSFSTHDTVI 473
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
S I P+G+ +D I LYW D V
Sbjct: 474 SGDIQAPDGIAVDW------------------------------IHGNLYWTD----SVL 499
Query: 294 LKIGKANMDGSNASILVS--GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
I AN GS L G A+ +D +G +Y WTDWG +IE+
Sbjct: 500 GTISVANTKGSKRKTLFKQEGAKPRAIVVDPVHGFMY-----------WTDWGTPAKIEK 548
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
G++G + +++ I WPNG+TLD+++ R+Y+ DSKL I + +G G ++++L D
Sbjct: 549 SGLNGVDSFPLVTENIQWPNGITLDLSSERLYWVDSKLHSISSVDVNG-GNRRIVLED 605
>gi|374428823|dbj|BAL49819.1| apolipoprotein E receptor 2 [Danio rerio]
Length = 988
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 109/301 (36%), Positives = 154/301 (51%), Gaps = 47/301 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++ +KVCD DC + +DE C L EC G CS+ C +G C CP G L
Sbjct: 310 CIDSSKVCDTIRDCKDWSDEPVKECGLNECAINNGGCSHICKDRQIGFECQCPSGYRLL- 368
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D TC D++ECE P CSQ+C N KG Y C C EGY ++ TCKA+ S +L+ +NR
Sbjct: 369 DKKTCGDIDECENPEACSQICINLKGDYKCECYEGYEMDPVTKTCKAVGKS-PYLMFTNR 427
Query: 124 HSILVADLEEKG--------KDHRAQDIVV------------------------------ 145
H I DL +K K+ A D+ V
Sbjct: 428 HEIRRIDLLKKDYTQVVPTLKNAVALDVDVTTNKMYWCDLYHRKIFSAYINKANNSSEQI 487
Query: 146 ----SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+ L EGLA DW+ +IYW DS I V + +G R VL + +PR + +DP
Sbjct: 488 TLIDTALHSPEGLAMDWVHKNIYWTDSGHKTISVANVDGKKRKVLIDTELGEPRAIAVDP 547
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++W+DWG +IE+ GM+G +R ++S +I WPNG+ LD+++ R+Y+ DSKL
Sbjct: 548 RQG--FMYWSDWGAQAKIEKAGMNGVDRQVLVSERIEWPNGIALDLSSSRLYWVDSKLHL 605
Query: 262 I 262
I
Sbjct: 606 I 606
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 180/443 (40%), Gaps = 101/443 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTC------HPTPLGALCTCPPG 58
C++L CDG DC + +DE C + C+ C + C PL +C G
Sbjct: 252 CIHLNWKCDGDPDCKDKSDEA-NCPVLTCRPDQFQCGDGCVNRTNKCEGPLKFMCK--SG 308
Query: 59 EILSNDSVT-----CQD----------MNECE-QPGYCSQMCTNTKGSYICSCNEGYVLE 102
E + + V C+D +NEC G CS +C + + + C C GY L
Sbjct: 309 ECIDSSKVCDTIRDCKDWSDEPVKECGLNECAINNGGCSHICKDRQIGFECQCPSGYRL- 367
Query: 103 YDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGH 162
D TC I+ S L D + + + D V V G
Sbjct: 368 LDKKTCGDIDECENPEACSQICINLKGDYKCECYEGYEMDPVTKTCKAV--------GKS 419
Query: 163 IYWLDSRLNRIEVCDENGTNRIVLAKDNITQ-----PRGMMLDPSPGTRWLFWTDWGENP 217
Y + + NR E+ RI L K + TQ + LD T ++W D
Sbjct: 420 PYLMFT--NRHEI------RRIDLLKKDYTQVVPTLKNAVALDVDVTTNKMYWCDLYHR- 470
Query: 218 RIERIGMDGSNRS----TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
+I ++ +N S T+I T ++ P GL +D
Sbjct: 471 KIFSAYINKANNSSEQITLIDTALHSPEGLAMDW-------------------------- 504
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYST 331
+ + +YW D G I AN+DG +L+ +L E A+A+D G +Y
Sbjct: 505 ----VHKNIYWTDSGHK----TISVANVDGKKRKVLIDTELGEPRAIAVDPRQGFMY--- 553
Query: 332 LKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
W+DWG +IE+ GM+G +R ++S +I WPNG+ LD+++ R+Y+ DSKL
Sbjct: 554 --------WSDWGAQAKIEKAGMNGVDRQVLVSERIEWPNGIALDLSSSRLYWVDSKLHL 605
Query: 392 IDFCNYDGTGRQQVILIDLMVEF 414
I + +G R+ IL+ M +
Sbjct: 606 ISSVDLNGDNRR--ILLSSMDQL 626
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
+ S + T+I T ++ P GL +D + +Y+ DS I N DG R+ +I +L
Sbjct: 482 NSSEQITLIDTALHSPEGLAMDWVHKNIYWTDSGHKTISVANVDGKKRKVLIDTEL---- 537
Query: 415 TNDLMGDNGVP-ALALDLENGMLYYSTEGAE 444
G P A+A+D G +Y+S GA+
Sbjct: 538 --------GEPRAIAVDPRQGFMYWSDWGAQ 560
>gi|326681199|ref|XP_002662283.2| PREDICTED: low-density lipoprotein receptor-like [Danio rerio]
Length = 560
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 171/343 (49%), Gaps = 61/343 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++ +VCDG+ DC + +DE C++ EC G CS+ C LG C+CP G L+N
Sbjct: 92 CISAERVCDGQRDCGDASDEPIRDCNVNECLSSNGGCSHLCVDLRLGFECSCPAGFRLAN 151
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
+ C+D++EC CSQMC N GSY C C EGY L++ C+A AFL+ S R
Sbjct: 152 HT-HCEDVDECVDADACSQMCVNLPGSYKCVCAEGYELDHMTRDCRAATGPEAFLLFSTR 210
Query: 124 HSI-------------------LVA-------------DLEEK-------GKDHRAQDIV 144
H + +VA DL ++ + + ++
Sbjct: 211 HEVRKLALGSREYTAVLRQQRNVVALDVDVQRDTLYWSDLSQRKIYSTTASNPTQNRTVI 270
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
S + EGLA DW+ +IYW DS + V +G+ R L + PR ++LDP
Sbjct: 271 DSWISRPEGLAVDWVHRNIYWTDSEQRSVSVATADGSKRKTLIH-GLQNPRAIVLDPQ-- 327
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
+ ++FW+DWG + RIER G++G++R+ +++ I WPNG+ LD+ RR+Y+ DSKL +
Sbjct: 328 SNFMFWSDWGVSARIERCGLNGADRTALVTDNIVWPNGIALDVLGRRLYWVDSKLHTL-- 385
Query: 265 KSLEIKTNVNYSTIF---------------RKLYWIDEGGNGV 292
S+ + N ++ I K++W D +G+
Sbjct: 386 SSIGVDGNGRHTLIHDQQTLPHPLALAVFEEKVFWTDVANHGI 428
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 12/105 (11%)
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
L+W+D + + + T+I + I P GL +D R +Y+ DS+ +
Sbjct: 245 LYWSDLSQRKIYSTTASNPTQNRTVIDSWISRPEGLAVDWVHRNIYWTDSEQRSVSVATA 304
Query: 398 DGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
DG+ R+ +I G A+ LD ++ +++S G
Sbjct: 305 DGSKRKTLI------------HGLQNPRAIVLDPQSNFMFWSDWG 337
>gi|198414835|ref|XP_002125195.1| PREDICTED: similar to low density lipoprotein receptor-related
protein 4, partial [Ciona intestinalis]
Length = 1166
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 155/545 (28%), Positives = 233/545 (42%), Gaps = 115/545 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGP--GCD--------LAECKHKFGLCSNTCHPTPLG-AL 52
+C+ + KVCDG DC + +DE P C+ C G C +TC + G A
Sbjct: 379 QCIGMHKVCDGVVDCLDSSDESPRRACNGSNMLPTNFTSCADNNGGCEHTCRESLSGRAQ 438
Query: 53 CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN 112
C C G LS D +C D+NEC + CSQ+C NT GS++CSC GY+L D+ TCKA
Sbjct: 439 CICRKGFELSPDLSSCIDLNECNEEASCSQVCNNTIGSFVCSCLHGYILRPDSRTCKASG 498
Query: 113 HSAAFLIISNRHSI------------LVADLEEK-GKDHR-------------------- 139
A L+ +NR I ++ DLE G D+
Sbjct: 499 PEPA-LLFTNRIDIRKILPDRSEFRSILRDLENAIGLDYHIDKGLMFWTDVTLDRIMRSY 557
Query: 140 -----AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
Q++V SGL+ G+A DWI +YW DS +R+EV +G+ R VL + + +P
Sbjct: 558 VNGSDVQEVVSSGLESPGGVAVDWIHNLLYWTDSGTSRLEVSLLDGSLRKVLVWERLEKP 617
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
R + L P +FWTDWG+ PR+E MDGS R T+ S ++WPNGL +D +Y+
Sbjct: 618 RALALHPLHSL--MFWTDWGDTPRLESAAMDGSQRHTVASRNLHWPNGLAIDYTRNHIYW 675
Query: 255 ADSKLDFIDCKSLE-------IKTNVNYS---TIFR-KLYWIDEG-----------GNGV 292
AD+K I+ +L+ I + + TIF KLYW D G GV
Sbjct: 676 ADAKYHIIEKANLDGGDRRAVISRGLLHPFGVTIFEDKLYWTDWQTKSVNSANKFTGRGV 735
Query: 293 ---------PLKI----------GKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
P+ I G + ++ S L + + + G +
Sbjct: 736 KTIRSRLHFPMDIQTYHPLRQPNGHNRCEQAHCSHLCLPRP-DGITCACPTGFRRVNITH 794
Query: 334 CT----RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR---RVYFAD 386
C +L +T I RI DG R+ + N + LD + +Y++D
Sbjct: 795 CAEDINHFLVFT---RKTDIRRISFDGVERADTVLPVKNLKNAVALDWHSDHPGHIYWSD 851
Query: 387 SKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFL 446
D I +DG+ + ++ L + LA+D +Y++ G +
Sbjct: 852 VSKDTISRAEWDGSQEKVIVSSSL-----------DSPAGLAIDWITNKIYWTEAGINRI 900
Query: 447 KTPLF 451
+ L
Sbjct: 901 EVALL 905
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 106/231 (45%), Gaps = 42/231 (18%)
Query: 72 NECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF-------------- 117
N CEQ +CS +C C+C G+ H + INH F
Sbjct: 761 NRCEQ-AHCSHLCLPRPDGITCACPTGFRRVNITHCAEDINHFLVFTRKTDIRRISFDGV 819
Query: 118 ------LIISNRHSILVADLEEKGKDH-------------------RAQDIVVSGLDLVE 152
L + N + + D H + + IV S LD
Sbjct: 820 ERADTVLPVKNLKNAVALDWHSDHPGHIYWSDVSKDTISRAEWDGSQEKVIVSSSLDSPA 879
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA DWI IYW ++ +NRIEV +G+ R VL + +PR +++ P G + W+D
Sbjct: 880 GLAIDWITNKIYWTEAGINRIEVALLDGSMRCVLIWTGLDRPRAIVVHPKTGH--MIWSD 937
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
WG P+IER GMDG+NR+T++ST + WPNG+ +D + +Y+ D+ I+
Sbjct: 938 WGAEPKIERAGMDGTNRTTLVSTGLTWPNGVAIDYTSDMIYWTDAGAKTIE 988
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 136/374 (36%), Gaps = 80/374 (21%)
Query: 131 LEEKGKDHRAQDIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
LE D + V S L GLA D+ HIYW D++ + IE + +G +R +
Sbjct: 640 LESAAMDGSQRHTVASRNLHWPNGLAIDYTRNHIYWADAKYHIIEKANLDGGDRRAVISR 699
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST-----------KIY 238
+ P G+ + L+WTDW G TI S +
Sbjct: 700 GLLHPFGVTIFEDK----LYWTDWQTKSVNSANKFTGRGVKTIRSRLHFPMDIQTYHPLR 755
Query: 239 WPNGLTLDIATRRVYFADSKLDFIDCKS---------LEIKTNVNYSTIFRKLYWIDEGG 289
PNG + + D I C ++N+ +F +
Sbjct: 756 QPNGHNRCEQAHCSHLCLPRPDGITCACPTGFRRVNITHCAEDINHFLVFTR-------- 807
Query: 290 NGVPLKIGKANMDGSNAS--ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
I + + DG + +L L A+ALD + + ++W+D ++
Sbjct: 808 ---KTDIRRISFDGVERADTVLPVKNLKNAVALDWHSDHPGH--------IYWSDVSKD- 855
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR----- 402
I R DGS I+S+ + P GL +D T ++Y+ ++ ++ I+ DG+ R
Sbjct: 856 TISRAEWDGSQEKVIVSSSLDSPAGLAIDWITNKIYWTEAGINRIEVALLDGSMRCVLIW 915
Query: 403 ---------------QQVILIDLMVEFTNDLMGDNGVP-------------ALALDLENG 434
+I D E + G +G +A+D +
Sbjct: 916 TGLDRPRAIVVHPKTGHMIWSDWGAEPKIERAGMDGTNRTTLVSTGLTWPNGVAIDYTSD 975
Query: 435 MLYYSTEGAEFLKT 448
M+Y++ GA+ ++T
Sbjct: 976 MIYWTDAGAKTIET 989
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 131 LEEKGKDHRAQDIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + +VS GL G+A D+ IYW D+ IE CD +G R VL D
Sbjct: 944 IERAGMDGTNRTTLVSTGLTWPNGVAIDYTSDMIYWTDAGAKTIETCDLHGAQRRVLVND 1003
Query: 190 NITQPRGMMLDPSPGTRWLFWTDW 213
++ P G+ LD TR ++WTDW
Sbjct: 1004 DLPHPFGITLD---ATR-IYWTDW 1023
>gi|17298316|gb|AAL38108.1| candidate tumor suppressor protein [Homo sapiens]
Length = 1731
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 184/420 (43%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+GK DCP+G+DEG CD EC G CSN C P G +C+CP G L+
Sbjct: 226 CLQPEKLCNGKKDCPDGSDEGYLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLNK 283
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC EG+ L+ D +C +++ AF+I S R
Sbjct: 284 DNKTCEIVDYCSNHLKCSQVCEQHKHTVKCSCYEGWKLDVDGESCTSVDSFEAFIIFSIR 343
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 344 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAIE 403
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 404 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDP 463
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 464 RYGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAR 521
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG+N ++ G Y +
Sbjct: 522 SDAI------------YSALY----------------------DGTNMIEIIRGHEYLSH 547
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 548 PFAVS---LYGSE------VYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYHPS 598
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 115/247 (46%), Gaps = 48/247 (19%)
Query: 69 QDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
Q N C+ G CSQ+C T + + C C GY L+ + +C+ I +FL+ S I
Sbjct: 909 QGSNSCQLNNGGCSQLCLPTSETTRTCMCTVGYYLQKNRMSCQGIE---SFLMYSVHEGI 965
Query: 127 LVADLEEKGK----------------DHRAQ-------------------------DIVV 145
LE K D A+ DI+
Sbjct: 966 RGIPLEPSDKMDALMPISGTSFAVGIDFHAENDTIYWTDMGFNKISRAKRDQTWKEDIIT 1025
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + + P G
Sbjct: 1026 NGLGRVEGIAVDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIAVHPEKGL 1085
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
LFWT+WG+ P I + +DGS + ++S I WPNG+++D ++Y+ D++ D I+
Sbjct: 1086 --LFWTEWGQMPCIGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERI 1143
Query: 266 SLEIKTN 272
LE N
Sbjct: 1144 DLETGGN 1150
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G N ++ST I PNGLT+D ++YF+D L
Sbjct: 1403 ECQNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGK 1462
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 1463 IERCEYDGSQRHVIV 1477
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 138/310 (44%), Gaps = 39/310 (12%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS MC N S C+C L D TC + FL+ + R I D++
Sbjct: 614 GPCSHMCLINHNRSAACACPHLMKLSSDKKTCYGMK---KFLLYARRSEIRGVDIDNPYF 670
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ V +D V + +D +YW D + I+ NGT + +I RG
Sbjct: 671 NFITA-FTVPDIDDVTVIDFDASEERLYWTDIKTQTIKRAFINGTGLETVISRDIQSIRG 729
Query: 197 MMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIIS--------------TKIYWPN 241
+ +D +R L+W + + +I +DGS +++II K+YW +
Sbjct: 730 LAVDWV--SRNLYWISSEFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD 787
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
G T+++A + ++SK+ F + K + +++Y + KLYWI GNG I + N+
Sbjct: 788 GNTINMAN--MDGSNSKILFQNQKE-PVGLSIDY--VENKLYWI-SSGNGT---INRCNL 838
Query: 302 DGSNASILVS--GQLYEALALDLENGMLYYSTLKCTRWLFWTDW-GENPRIERIGMDGSN 358
DG N ++ S +L +A AL + + L+++ + + G NP I R +
Sbjct: 839 DGGNLEVIESMKEELTKATALTIMDKKLWWADQNLAQLGTCSKRDGRNPTILR-----NK 893
Query: 359 RSTIISTKIY 368
S ++ K+Y
Sbjct: 894 TSGVVHMKVY 903
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 96/224 (42%), Gaps = 33/224 (14%)
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++D L+WTD + I+R ++G+ T+IS I GL +D +R +Y+ S
Sbjct: 686 VIDFDASEERLYWTDI-KTQTIKRAFINGTGLETVISRDIQSIRGLAVDWVSRNLYWISS 744
Query: 258 KLDFIDCKSLEIKTNVNYSTIFR--------------KLYWIDEGGNGVPLKIGKANMDG 303
+ D + ++ S I KLYW D GN + + ANMDG
Sbjct: 745 EFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD--GNTINM----ANMDG 798
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
SN+ IL Q E + L ++ Y K L+W G N I R +DG N I
Sbjct: 799 SNSKILFQNQ-KEPVGLSID-----YVENK----LYWISSG-NGTINRCNLDGGNLEVIE 847
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
S K L I +++++AD L + C+ GR IL
Sbjct: 848 SMKEELTKATALTIMDKKLWWADQNLAQLGTCS-KRDGRNPTIL 890
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 94/242 (38%), Gaps = 58/242 (23%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-----NRIEVCDENGTNR---IVLAKDNIT 192
+ ++V + VEGLAY +YW S + ++ +R I +++D+
Sbjct: 1337 RQVIVENVGSVEGLAYHRAWDTLYWTSSTTSSITRHTVDQTRPGAFDREAVITMSEDD-- 1394
Query: 193 QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
P + LD +FWT+W E +P I R + G N ++ST I PNGLT+D +
Sbjct: 1395 HPHVLALDECQNL--MFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEK 1452
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+YF+D L KI + DGS ++V
Sbjct: 1453 LYFSDGSLG----------------------------------KIERCEYDGSQRHVIVK 1478
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
L+L + + ++FW+DWG + G + + S + P
Sbjct: 1479 SGPGTFLSLAVYDN-----------YIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPM 1527
Query: 372 GL 373
G+
Sbjct: 1528 GI 1529
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ +V + + GL D+ +Y+ D L +IE C+ +G+ R V+ K G L
Sbjct: 1430 AQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGKIERCEYDGSQRHVIVKSG----PGTFL 1485
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ ++FW+DWG + G + + S + P G+
Sbjct: 1486 SLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGI 1529
>gi|373838786|ref|NP_001243322.1| low-density lipoprotein receptor-related protein 8 precursor [Danio
rerio]
gi|368511252|dbj|BAL43069.1| apolipoprotein E receptor 2 [Danio rerio]
Length = 984
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 109/301 (36%), Positives = 154/301 (51%), Gaps = 47/301 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++ +KVCD DC + +DE C L EC G CS+ C +G C CP G L
Sbjct: 333 CIDSSKVCDTIRDCKDWSDEPVKECGLNECAINNGGCSHICKDRQIGFECQCPSGYKLL- 391
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D TC D++ECE P CSQ+C N KG Y C C EGY ++ TCKA+ S +L+ +NR
Sbjct: 392 DKKTCGDIDECENPEACSQICINLKGDYKCECYEGYEMDPVTKTCKAVGKS-PYLMFTNR 450
Query: 124 HSILVADLEEKG--------KDHRAQDIVV------------------------------ 145
H I DL +K K+ A D+ V
Sbjct: 451 HEIRRIDLLKKDYTQVVPTLKNAVALDVDVTTNKMYWCDLYHRKIFSAYINKANNSSEQI 510
Query: 146 ----SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+ L EGLA DW+ +IYW DS I V + +G R VL + +PR + +DP
Sbjct: 511 TLIDTALHSPEGLAMDWVHKNIYWTDSGHKTISVANVDGKKRKVLIDTELGEPRAIAVDP 570
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++W+DWG +IE+ GM+G +R ++S +I WPNG+ LD+++ R+Y+ DSKL
Sbjct: 571 RQG--FMYWSDWGAQAKIEKAGMNGVDRQVLVSERIEWPNGIALDLSSSRLYWVDSKLHL 628
Query: 262 I 262
I
Sbjct: 629 I 629
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 180/437 (41%), Gaps = 105/437 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C++ TK C+ DCP+ +DE A C ++ C PL +C GE + +
Sbjct: 291 CIHGTKQCNKVHDCPDFSDE------AGCVNRTNKCEG-----PLKFMCK--SGECIDSS 337
Query: 65 SVT-----CQD----------MNECE-QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTC 108
V C+D +NEC G CS +C + + + C C GY L D TC
Sbjct: 338 KVCDTIRDCKDWSDEPVKECGLNECAINNGGCSHICKDRQIGFECQCPSGYKL-LDKKTC 396
Query: 109 KAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS 168
I+ S L D + + + D V V G Y + +
Sbjct: 397 GDIDECENPEACSQICINLKGDYKCECYEGYEMDPVTKTCKAV--------GKSPYLMFT 448
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQ-----PRGMMLDPSPGTRWLFWTDWGENPRIERIG 223
NR E+ RI L K + TQ + LD T ++W D +I
Sbjct: 449 --NRHEI------RRIDLLKKDYTQVVPTLKNAVALDVDVTTNKMYWCDLYHR-KIFSAY 499
Query: 224 MDGSNRS----TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIF 279
++ +N S T+I T ++ P GL +D +
Sbjct: 500 INKANNSSEQITLIDTALHSPEGLAMDW------------------------------VH 529
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRW 337
+ +YW D G + + AN+DG +L+ +L E A+A+D G +Y
Sbjct: 530 KNIYWTDSGHKTISV----ANVDGKKRKVLIDTELGEPRAIAVDPRQGFMY--------- 576
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
W+DWG +IE+ GM+G +R ++S +I WPNG+ LD+++ R+Y+ DSKL I +
Sbjct: 577 --WSDWGAQAKIEKAGMNGVDRQVLVSERIEWPNGIALDLSSSRLYWVDSKLHLISSVDL 634
Query: 398 DGTGRQQVILIDLMVEF 414
+G R+ IL+ M +
Sbjct: 635 NGDNRR--ILLSSMDQL 649
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
+ S + T+I T ++ P GL +D + +Y+ DS I N DG R+ +I +L
Sbjct: 505 NSSEQITLIDTALHSPEGLAMDWVHKNIYWTDSGHKTISVANVDGKKRKVLIDTEL---- 560
Query: 415 TNDLMGDNGVP-ALALDLENGMLYYSTEGAE 444
G P A+A+D G +Y+S GA+
Sbjct: 561 --------GEPRAIAVDPRQGFMYWSDWGAQ 583
>gi|390465970|ref|XP_002807051.2| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 8 [Callithrix jacchus]
Length = 958
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 152/299 (50%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C G CTCP G L
Sbjct: 306 CVLAIKHCNHEQDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKNGFECTCPAGFQLL 364
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG + C C GY ++ CKA + LI +N
Sbjct: 365 -DKKTCGDIDECEDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAAGKSPSLIFTN 423
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D + Q
Sbjct: 424 RHEVRKIDLVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPKEQ 483
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++++ L EGLA DW+ HIYW DS I V +G R L N+++PR + +D
Sbjct: 484 EVLIDEQLHSPEGLAVDWVHRHIYWTDSGNKTISVATVDGGRRCTLFSRNLSEPRAIAVD 543
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 544 PLRG--FMYWSDWGYQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 600
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 175/422 (41%), Gaps = 91/422 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTC--------HPTPLGALCTC 55
CV+L CDG DC + +DE C L C+ +F TC H C
Sbjct: 267 CVHLGWRCDGDRDCKDKSDEA-DCPLGTCRGDEFQCGDGTCVLAIKHCNHEQ------DC 319
Query: 56 PPGEILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH- 113
P G S+++ Q +NEC G CS +CT+ K + C+C G+ L D TC I+
Sbjct: 320 PDG---SDEAGCLQGLNECLHNNGGCSHICTDLKNGFECTCPAGFQL-LDKKTCGDIDEC 375
Query: 114 ---SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL 170
A I N + + D++ G + I + + +
Sbjct: 376 EDPDACSQICVNYKGYFKCECYPGYE----MDLLTKNCKAAAGKSPSLIFTNRH----EV 427
Query: 171 NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN-- 228
+I++ N + I + K+ + LD T ++W D +I MD ++
Sbjct: 428 RKIDLVKRNYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDP 480
Query: 229 --RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWID 286
+ +I +++ P GL +D + R +YW D
Sbjct: 481 KEQEVLIDEQLHSPEGLAVDW------------------------------VHRHIYWTD 510
Query: 287 EGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWG 344
G I A +DG L S L E A+A+D G +Y W+DWG
Sbjct: 511 SGNK----TISVATVDGGRRCTLFSRNLSEPRAIAVDPLRGFMY-----------WSDWG 555
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
+IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL + ++ G R++
Sbjct: 556 YQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKR 615
Query: 405 VI 406
+I
Sbjct: 616 LI 617
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN--RIVLAKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D +G N R++ + D ++ P G+
Sbjct: 571 QTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKRLISSADFLSHPFGIA 630
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 631 V----FEDKVFWTD 640
>gi|383849495|ref|XP_003700380.1| PREDICTED: very low-density lipoprotein receptor-like [Megachile
rotundata]
Length = 935
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 113/299 (37%), Positives = 150/299 (50%), Gaps = 45/299 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ + VC+ DC DE C + EC G CS C P+G C C G L
Sbjct: 380 CIPIYNVCNKNRDCIGWEDESTELCGVNECLKNNGGCSQICVDLPIGFRCNCSAGYRLI- 438
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D+ TC D++EC PG CSQ C N KG + CSC GY+ + +HT CKA A+ L+ +
Sbjct: 439 DNRTCDDIDECLIPGSCSQFCLNEKGGFKCSCATGYLKDPRDHTRCKAAEGHAS-LLFTR 497
Query: 123 RHSIL--------VADLEEKGKDHRAQDIVV----------------------------- 145
RH I + D+ + K A D V
Sbjct: 498 RHDIRKVALDRLEMTDIVKNTKMATALDFVFRTGMIFWSDINEKKIYKAPIDEGNERTVV 557
Query: 146 --SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
GL +GLA DWI HIYW DSR + IE+ + G R L +D I +PR + L+P
Sbjct: 558 IDDGLTTSDGLAVDWIYSHIYWTDSRKSTIELANFEGNMRKTLIRDRIQEPRAIALNPLE 617
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G W+FWTDW + RIE+ GMDGS+R I+ + WPNGLTLD+ R+VY+ D+KL+ I
Sbjct: 618 G--WMFWTDWSDEARIEKAGMDGSHRMVIVDNDVKWPNGLTLDLIGRKVYWVDAKLNII 674
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 13/100 (13%)
Query: 308 ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD-GSNRSTIISTK 366
I+ + ++ AL GM+ FW+D E +I + +D G+ R+ +I
Sbjct: 514 IVKNTKMATALDFVFRTGMI-----------FWSDINEK-KIYKAPIDEGNERTVVIDDG 561
Query: 367 IYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ +GL +D +Y+ DS+ I+ N++G R+ +I
Sbjct: 562 LTTSDGLAVDWIYSHIYWTDSRKSTIELANFEGNMRKTLI 601
>gi|332809035|ref|XP_513416.3| PREDICTED: low-density lipoprotein receptor-related protein 8
isoform 4 [Pan troglodytes]
Length = 960
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 153/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C +G C CP G L
Sbjct: 308 CVLAIKHCNQEQDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECACPAGFQLL 366
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ P CSQ+C N KG + C C GY ++ CKA + LI +N
Sbjct: 367 -DQKTCGDIDECKDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAAGKSPSLIFTN 425
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D + Q
Sbjct: 426 RHEVRRIDLVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPKEQ 485
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++++ L EGLA DW+ HIYW DS I V +G R L N+++PR + +D
Sbjct: 486 EVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRRTLFSRNLSEPRAIAVD 545
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG+ +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 546 PLRG--FMYWSDWGDQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 602
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 174/416 (41%), Gaps = 79/416 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTC--HPTPLGALCTCPPGEIL 61
CV+L CDG DC + +DE C L C+ +F TC CP G
Sbjct: 269 CVHLGWRCDGDRDCKDKSDEA-DCPLGTCRGDEFQCGDGTCVLAIKHCNQEQDCPDG--- 324
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SAA 116
S+++ Q +NEC G CS +CT+ K + C+C G+ L D TC I+ A
Sbjct: 325 SDEAGCLQGLNECLHNNGGCSHICTDLKIGFECACPAGFQL-LDQKTCGDIDECKDPDAC 383
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
I N + + D++ G + I + + + RI++
Sbjct: 384 SQICVNYKGYFKCECYPGYE----MDLLTKNCKAAAGKSPSLIFTNRH----EVRRIDLV 435
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RSTI 232
N + I + K+ + LD T ++W D +I MD ++ + +
Sbjct: 436 KRNYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPKEQEVL 488
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
I +++ P GL +D + + +YW D G
Sbjct: 489 IDEQLHSPEGLAVDW------------------------------VHKHIYWTDSGNK-- 516
Query: 293 PLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
I A +DG L S L E A+A+D G +Y W+DWG+ +IE
Sbjct: 517 --TISVATVDGGRRRTLFSRNLSEPRAIAVDPLRGFMY-----------WSDWGDQAKIE 563
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL + ++ G R+ +I
Sbjct: 564 KSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKMLI 619
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL--AKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D +G NR +L + D ++ P G+
Sbjct: 573 QTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKMLISSTDFLSHPFGIA 632
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 633 V----FEDKVFWTD 642
>gi|426337621|ref|XP_004032799.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like,
partial [Gorilla gorilla gorilla]
Length = 902
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 174/352 (49%), Gaps = 67/352 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
RC+++ KVCDG DCP DE G C C C CH TP G C CP G
Sbjct: 300 RCISIYKVCDGILDCPGREDENNTSTGKYCSTTLCSALN--CQYQCHETPYGGACFCPSG 357
Query: 59 EILS-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I++ NDS TC + ++C+ G C Q C + G ++C C EGY+LE + + A
Sbjct: 358 YIINHNDSRTCVEFDDCQIWGICDQKCESRPGRHLCHCEEGYILERGQYCKANDSFGEAS 417
Query: 118 LIISNRHSILVADLEEKGKDHR-------------------------------------- 139
+I SN +L+ D+ G+ R
Sbjct: 418 IIFSNGRDLLIGDIH--GRSFRILVESQNRGVAVGVAFHYHLQRVFWTDTVQNKVFSVDI 475
Query: 140 ----AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
Q+++ ++ E LA DW+ IY +++++NRI++ + +G+ R+ L +N+ PR
Sbjct: 476 NGLNIQEVLNVSVETPENLAVDWVNNKIYLVETKVNRIDMVNLDGSYRVTLITENLGHPR 535
Query: 196 GMMLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
G+ +DP+ G +LF++DW P++ER MDGSNR ++ TK+ WP G+TLD+ ++RV
Sbjct: 536 GIAVDPTVG--YLFFSDWESLSGEPKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKRV 593
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
Y+ DS+ D+I+ V Y I RK + GG+ +P G + +G
Sbjct: 594 YWVDSRFDYIE--------TVTYDGIQRKT--VVHGGSLIPHPFGISLFEGQ 635
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 97/198 (48%), Gaps = 10/198 (5%)
Query: 68 CQDMNE-CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
C+D N CEQ S N + C C G+ L+ D C I + ++
Sbjct: 685 CKDNNGGCEQVCVLSHRTDNDGLGFRCKCTFGFQLDTDERHC--IGKKSVLDVVGRVQLC 742
Query: 127 LVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIV 185
++ ++K + + + ++ VE LA+DWI ++YW DS I V + T R V
Sbjct: 743 MI--FKQKIDGTGREILAANRVENVESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTV 800
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
+ + PR +++ P G +LF+TDW +I R DGS+ +I+T + WPNGL +
Sbjct: 801 VQY--LNNPRSVVVHPFAG--YLFFTDWFRPAKIMRAWSDGSHLLPVINTTLGWPNGLAV 856
Query: 246 DIATRRVYFADSKLDFID 263
D A R+Y+ D+ D I+
Sbjct: 857 DWAASRLYWVDAYFDKIE 874
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 151/367 (41%), Gaps = 73/367 (19%)
Query: 110 AINHSAAFLIISNRHSIL-VADLEEKGKD-HRAQDIVVSGLDLVEGLAYDWIGGHIYWLD 167
A++ + +L S+ S+ LE D +D+V + L G+ D I +YW+D
Sbjct: 538 AVDPTVGYLFFSDWESLSGEPKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKRVYWVD 597
Query: 168 SRLNRIEVCDENGTNR--IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD 225
SR + IE +G R +V I P G+ L +F+TDW ++ +
Sbjct: 598 SRFDYIETVTYDGIQRKTVVHGGSLIPHPFGISLFEGQ----VFFTDW------TKMAVL 647
Query: 226 GSNRSTIISTKIYW-----PNGLTLDIATRRVYFADSKLD-------------------- 260
+N+ T + ++Y+ P G+T+ + R+ Y + D
Sbjct: 648 KANKFTETNPQVYYQASLRPYGVTVYHSLRQPYATNPCKDNNGGCEQVCVLSHRTDNDGL 707
Query: 261 FIDCK-SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEA 317
CK + + + + K +D G I K +DG+ IL + ++ E+
Sbjct: 708 GFRCKCTFGFQLDTDERHCIGKKSVLDVVGRVQLCMIFKQKIDGTGREILAANRVENVES 767
Query: 318 LALDLENGMLY-----YSTLKCTR--------------------------WLFWTDWGEN 346
LA D + LY Y ++ R +LF+TDW
Sbjct: 768 LAFDWISKNLYWTDSHYKSISVMRLADKTRRTVVQYLNNPRSVVVHPFAGYLFFTDWFRP 827
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I R DGS+ +I+T + WPNGL +D A R+Y+ D+ D I+ +DG R+++
Sbjct: 828 AKIMRAWSDGSHLLPVINTTLGWPNGLAVDWAASRLYWVDAYFDKIEHSTFDGLDRRRLG 887
Query: 407 LIDLMVE 413
I+ M
Sbjct: 888 HIEQMTH 894
>gi|395840452|ref|XP_003793073.1| PREDICTED: low-density lipoprotein receptor-related protein 1B-like,
partial [Otolemur garnettii]
Length = 2159
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 184/420 (43%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+G+ DCP+G+DEG CD EC G CSN C P G +C+CP G L+
Sbjct: 1044 CLQPEKLCNGQRDCPDGSDEGDLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLNK 1101
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC EG+ L+ D +C +++ AFLI S R
Sbjct: 1102 DNKTCEIVDYCSNHLKCSQVCEQQKHTVKCSCYEGWKLDGDGESCTSVDPFEAFLIFSIR 1161
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1162 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAIE 1221
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 1222 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRATLIAGAMEHPRAIALDP 1281
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 1282 RYGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAR 1339
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG+N ++ G Y +
Sbjct: 1340 SDAI------------YSALY----------------------DGTNMIEIIRGHEYLSH 1365
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 1366 PFAVS---LYGSE------VYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYHPS 1416
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 152/315 (48%), Gaps = 65/315 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-------PGCDLAECKHKFGLCSNTCHPTPLGALCTCP 56
RCV+L+++C+G DC +G+DEG P C C++K + N+ + C C
Sbjct: 89 RCVHLSQLCNGVLDCSDGSDEGVHCQELLPSCQQLNCQYKCAMVRNS-------SRCYCE 141
Query: 57 PGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA- 115
G + D +C+D +EC G CSQ C NT GS+ CSC EGY+L+ DN +CKA N
Sbjct: 142 DGFEIKEDRRSCKDQDECAIYGTCSQTCVNTHGSFACSCVEGYLLQPDNRSCKAKNEPTD 201
Query: 116 --AFLIISNRHSI-------------------------------LVADLEEKGKDHRAQD 142
L+I+N +I ++ +E + ++ +
Sbjct: 202 RPPLLLIANFETIEMFYLNGSKMVTVNSVNGNEIHTLDFIYNEDMICWIESRESSNQLKC 261
Query: 143 I---------------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
I ++ V+ +A DW+ ++Y++D +RI VC+ NG+ + L
Sbjct: 262 IQITKAGRLTDEWTINILQSFHNVQQMAIDWLTRNLYFVDHVSDRIFVCNYNGSICVTLI 321
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P+ + +DP G LF+TD+G ++ER MDG NR+ II +K P L LD+
Sbjct: 322 DLELHNPKAIAVDPIAGK--LFFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALALDL 379
Query: 248 ATRRVYFADSKLDFI 262
+ VY+ D LD++
Sbjct: 380 VNKLVYWVDLYLDYV 394
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 95/198 (47%), Gaps = 50/198 (25%)
Query: 77 PGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK 134
PG CS +C +++ + C C G+ L D +CK
Sbjct: 483 PGGCSHICLLSSSYKTRTCRCRTGFNLGSDGRSCK------------------------- 517
Query: 135 GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL-DSRLNRIEVC--DENGTNRIVLAKDNI 191
LD VEG+A DWIG ++YW D + I V ++ +R L + +
Sbjct: 518 ------------NLDNVEGIAVDWIGNNLYWTNDGQRKTINVARLEKASQSRKTLLEGEM 565
Query: 192 TQPRGMMLDPSPGTRWLFWTDWGENP------RIERIGMDGSNRSTIISTKIYWPNGLTL 245
+ PRG+++DP G W++WTDW E+ RIE+ MDG +R +++K+ WPNGLTL
Sbjct: 566 SHPRGIVVDPVNG--WMYWTDWEEDEIDDSVGRIEKAWMDGFSRQIFVTSKMLWPNGLTL 623
Query: 246 DIATRRVYFADSKLDFID 263
D T +Y+ D+ D I+
Sbjct: 624 DFHTNTLYWCDAYYDHIE 641
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 174/420 (41%), Gaps = 61/420 (14%)
Query: 38 GLCSNTCHPTP-LGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQM-CTNTKGSYICSC 95
G CS+ C A C CP LS+D TC +M + S++ + Y
Sbjct: 1432 GPCSHMCLINHNRSAACACPHLMKLSSDKKTCYEMKKFLLYARRSEIRGVDIDNPYFNFI 1491
Query: 96 NEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLA 155
V + D+ T + S L ++ + + G + ++ + + GLA
Sbjct: 1492 TAFTVPDIDDVTVIDFDASEERLYWTDIKTQTIKRAFINGTG--LETVISRDIQSIRGLA 1549
Query: 156 YDWIGGHIYWLDSRLN--RIEVCDENGTNRIVLAKDNI-TQPRGM----MLDPSPGTRWL 208
DW+ ++YW+ S + +I V +G+ + + + TQ G+ ++ S R L
Sbjct: 1550 VDWVSRNLYWISSEFDETQINVARLDGSLKTSIIHGIVSTQQVGLHVIFLIHISFELRKL 1609
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS----------- 257
+WTD I MDGSN S I+ P GL++D ++Y+ S
Sbjct: 1610 YWTD---GNTINMANMDGSN-SKILFQNQKEPVGLSIDYVENKLYWISSGNGTINRCNLD 1665
Query: 258 --KLDFIDCKSLEIKTNVNYSTIFRK--LYWIDEGGNGVPLKIGKANMDG-------SNA 306
L+ I+ E+ T TI +YW D G N KI +A D N
Sbjct: 1666 GGNLEVIESMKEEL-TKATALTIMENDTIYWTDMGFN----KISRAKRDQFFSHNCIMNT 1720
Query: 307 SILVSGQLY------EALALDLENGMLYYSTLKC-------------TRWLFWTDWGENP 347
I + G +Y + + NG Y + LFWT+WG+ P
Sbjct: 1721 LIFLLGNIYWTDHGFNLIEVARLNGSFRYVIMSQGLDQPRSIAVHPEKGLLFWTEWGQIP 1780
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
I + +DGS + ++S I WPNG+++D ++Y+ D++ D I+ + + G ++++L
Sbjct: 1781 CIGKAHLDGSEKVILVSMGIAWPNGISIDYEENKLYWCDARTDKIERIDLETGGNREMVL 1840
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 147/350 (42%), Gaps = 64/350 (18%)
Query: 101 LEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIG 160
LE N A++ A L ++ ++ + + +R + I+ S + LA D +
Sbjct: 323 LELHNPKAIAVDPIAGKLFFTDYGNVAKVERCDMDGMNRTR-IIDSKTEQPAALALDLVN 381
Query: 161 GHIYWLDSRLNRIEVCDENGTNR-IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRI 219
+YW+D L+ + V D G NR VL I G+ + +L+ T+ +N I
Sbjct: 382 KLVYWVDLYLDYVGVVDYQGQNRHTVLQGRQIRHLYGITVFED----YLYATN-SDNFNI 436
Query: 220 ERIG-MDGSNRSTIIST------KIY-------------------WPNG------LTLDI 247
RI +G++ ++I +IY P G L+
Sbjct: 437 IRINRFNGTDVHSLIKMENARGIRIYQKRTQPTVRSHACELDAYGMPGGCSHICLLSSSY 496
Query: 248 ATR----RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
TR R F + D CK+L+ + I LYW ++G + + +
Sbjct: 497 KTRTCRCRTGF-NLGSDGRSCKNLDNVEGIAVDWIGNNLYWTNDGQRKT-INVARLEKAS 554
Query: 304 SNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENP------RIERIGMD 355
+ L+ G++ + +D NG W++WTDW E+ RIE+ MD
Sbjct: 555 QSRKTLLEGEMSHPRGIVVDPVNG-----------WMYWTDWEEDEIDDSVGRIEKAWMD 603
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
G +R +++K+ WPNGLTLD T +Y+ D+ D I+ +GT R+ V
Sbjct: 604 GFSRQIFVTSKMLWPNGLTLDFHTNTLYWCDAYYDHIEKVFLNGTHRKIV 653
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 17/129 (13%)
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTRW 337
R LY++D V +I N +GS L+ +L+ +A+A+D G L
Sbjct: 295 RNLYFVDH----VSDRIFVCNYNGSICVTLIDLELHNPKAIAVDPIAGKL---------- 340
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
F+TD+G ++ER MDG NR+ II +K P L LD+ + VY+ D LD++ +Y
Sbjct: 341 -FFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVGVVDY 399
Query: 398 DGTGRQQVI 406
G R V+
Sbjct: 400 QGQNRHTVL 408
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 316 EALALDLENGMLYYSTL-KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGL 373
EA+ E+ + TL +C +FWT+W E +P I R + G N ++ST I PNGL
Sbjct: 2070 EAVITMSEDDHPHVLTLDECQNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGL 2129
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGR 402
T+D ++YF+D L I+ C YDG+ R
Sbjct: 2130 TIDHRAEKLYFSDGSLGKIERCEYDGSQR 2158
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 13/132 (9%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-----NRIEVCDENGTNR---IVLAKDNIT 192
+ ++V + VEGLAY +YW S + ++ +R I +++D+
Sbjct: 2022 RQVIVENVGSVEGLAYHRAWDTLYWTSSTTSSITRHTVDQTRPGAFDREAVITMSEDD-- 2079
Query: 193 QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
P + LD +FWT+W E +P I R + G N ++ST I PNGLT+D +
Sbjct: 2080 HPHVLTLDECQNL--MFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDHRAEK 2137
Query: 252 VYFADSKLDFID 263
+YF+D L I+
Sbjct: 2138 LYFSDGSLGKIE 2149
>gi|296212087|ref|XP_002752730.1| PREDICTED: prolow-density lipoprotein receptor-related protein 1
[Callithrix jacchus]
Length = 1976
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 142/438 (32%), Positives = 198/438 (45%), Gaps = 111/438 (25%)
Query: 5 CVNLTKVCDGKTDCPNGADE--GPGCDL-AECKHKFGLCSNTCHPTPLGALCT------- 54
CV +CDG DC +GADE GC + C + +C N P +C
Sbjct: 329 CVPERWLCDGDKDCADGADESIAAGCLYNSTCDDREFMCQNR-QCIPKHFVCDHDRDCAD 387
Query: 55 ---------CPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEY-D 104
C PG L +D TC D++EC CSQ C NT GSY C C EGY D
Sbjct: 388 GSDESPDAFCRPGFRLKDDGRTCADVDECGTTFPCSQRCINTHGSYKCLCVEGYAPRGGD 447
Query: 105 NHTCKAINHSAAFLIISNRHSILVADLEEKGK---------------DHRAQ-----DIV 144
H+CKA+ FLI +NR+ + +L+ D+R Q D+
Sbjct: 448 PHSCKAVTDEEPFLIFANRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVT 507
Query: 145 V--------------------SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
+GL +GLA DW+GG++YW D + IEV NG R
Sbjct: 508 TQGSMIRRMHLNGSNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRT 567
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
VL + +PR +++D G +L+WTDWG++ I RIGMDGS+RS I+ TKI WPNGLT
Sbjct: 568 VLVSSGLREPRALVVDVQNG--YLYWTDWGDHSLIGRIGMDGSSRSVIVDTKITWPNGLT 625
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
LD T R+Y+AD++ D+I+ A++DGS
Sbjct: 626 LDYVTERIYWADAREDYIE----------------------------------FASLDGS 651
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTII 363
N +++S + AL L +Y WTDW E I R G+N++ +I
Sbjct: 652 NRHVVLSQDIPHIFALTLFEDYVY-----------WTDW-ETKSINRAHKTTGTNKTLLI 699
Query: 364 STKIYWPNGLTLDIATRR 381
ST ++ P L + A R+
Sbjct: 700 ST-LHRPMDLHVFHALRQ 716
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 85/148 (57%), Gaps = 10/148 (6%)
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
AA SNRH + ++G H + +SGL + G+A DW+ G++YW DS + IE
Sbjct: 1364 AAPPTTSNRHRRQI----DRGVTH----LNISGLKMPRGIAIDWVAGNVYWTDSGRDVIE 1415
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V G NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++
Sbjct: 1416 VAQMKGENRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQ 1473
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
I WP GL +D R+Y+AD+KL I
Sbjct: 1474 DNIQWPTGLAVDYHNERLYWADAKLSVI 1501
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 163/406 (40%), Gaps = 90/406 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNT--CHPTPLGALCTCP 56
RC++ + C+ DC +G+DE P L C +C + C T A C C
Sbjct: 1185 RCLSSSLRCNMFDDCGDGSDEEDCSIDP--KLTSCTANASICGDEARCVRTEKAAYCACR 1242
Query: 57 PGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAA 116
G CQD+NEC + G CSQ+C NTKG ++CSC ++ ++ TCKA
Sbjct: 1243 SGFHTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHN--TCKAEGSEYQ 1300
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
L I++ + I G H A + G + V R++ ++V
Sbjct: 1301 VLYIADDNEIRSL---FPGHPHSAYEQAFQGDESV-----------------RIDAMDVH 1340
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 236
+ G ++WT+W + IS +
Sbjct: 1341 VKAGR--------------------------VYWTNW---------------HTGTISYR 1359
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI 296
P + R D + ++ L++ + + +YW D G + + +
Sbjct: 1360 SL-PPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEV-- 1416
Query: 297 GKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
A M G N L+SG + E A+ +D G +Y W+DWG +P+IE M
Sbjct: 1417 --AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAM 1463
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
DG+ R T++ I WP GL +D R+Y+AD+KL I +GT
Sbjct: 1464 DGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT 1509
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 471 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 520
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 521 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 578
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 579 ---------ALVVDVQNGYLYWTDWGDHSL 599
>gi|354466663|ref|XP_003495793.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
[Cricetulus griseus]
Length = 1020
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 155/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 368 CVLAIKRCNQEHDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL 426
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ P CSQ+C N KG + C C+ GY ++ CKA+ + LI +N
Sbjct: 427 -DQKTCGDIDECQDPDACSQICVNYKGYFKCECHPGYEMDSQTKNCKAVAGKSPSLIFTN 485
Query: 123 RHSILVADLEEKG--------KDHRAQDIVVS---------------------------- 146
RH + DL ++ K+ + D+ V+
Sbjct: 486 RHEVRRIDLVKRDYSRLIPMLKNVVSLDVEVATNRIYWCDLSYRKIYSAHMDKASIPDEQ 545
Query: 147 ------GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
L EGLA DW+ HIYW DS I V +G R L +++PR + +D
Sbjct: 546 VVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGRRRCTLFSRELSEPRAIAVD 605
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG +IE+ G++G++R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 606 PLRG--FMYWSDWGFQAKIEKSGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 662
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 174/417 (41%), Gaps = 79/417 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSN-TC--HPTPLGALCTCPPGEIL 61
C++L CDG DC + +DE C C C + TC CP G
Sbjct: 329 CIHLGWRCDGDRDCKDKSDEA-DCSPGPCSENDFQCGDGTCVLAIKRCNQEHDCPDG--- 384
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SAA 116
S+++ Q +NEC G CS +CT+ K + C+C G+ L D TC I+ A
Sbjct: 385 SDEAGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGDIDECQDPDAC 443
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
I N + + D V G + I + + + RI++
Sbjct: 444 SQICVNYKGYFKCECHPGYE----MDSQTKNCKAVAGKSPSLIFTNRH----EVRRIDLV 495
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RSTI 232
+ + I + K+ ++ LD T ++W D +I MD ++ + +
Sbjct: 496 KRDYSRLIPMLKNVVS------LDVEVATNRIYWCDLSYR-KIYSAHMDKASIPDEQVVL 548
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
I +++ P GL +D + + +YW D G
Sbjct: 549 IDEQLHSPEGLAVDW------------------------------VHKHIYWTDSGNK-- 576
Query: 293 PLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
I A +DG L S +L E A+A+D G +Y W+DWG +IE
Sbjct: 577 --TISVATVDGRRRCTLFSRELSEPRAIAVDPLRGFMY-----------WSDWGFQAKIE 623
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+ G++G++R T++S I WPNG+TLD+ ++R+Y+ DSKL + +++G R+ +I
Sbjct: 624 KSGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFNGGNRKMLIF 680
>gi|1483143|dbj|BAA09328.1| apolipoprotein E receptor 2 precursor [Homo sapiens]
gi|2344802|dbj|BAA21824.1| ApoER2 [Homo sapiens]
Length = 963
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 154/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 311 CVLAIKHCNQEQDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL 369
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ P CSQ+C N KG + C C GY ++ CKA + LI +N
Sbjct: 370 -DQKTCGDIDECKDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAGGKSPSLIFTN 428
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
R+ + DL +K D + Q
Sbjct: 429 RYEVRRIDLVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPKEQ 488
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++++ L EGLA DW+ HIYW DS I V +G R L N+++PR + +D
Sbjct: 489 EVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRRTLFSRNLSEPRAIAVD 548
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG+ +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 549 PLRG--FMYWSDWGDQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 605
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 174/416 (41%), Gaps = 79/416 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTC--HPTPLGALCTCPPGEIL 61
CV+L CDG DC + +DE C L C+ +F TC CP G
Sbjct: 272 CVHLGWRCDGDRDCKDKSDEA-DCPLGTCRGDEFQCGDGTCVLAIKHCNQEQDCPDG--- 327
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SAA 116
S+++ Q +NEC G CS +CT+ K + C+C G+ L D TC I+ A
Sbjct: 328 SDEAGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGDIDECKDPDAC 386
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
I N + + D++ G + I + Y + RI++
Sbjct: 387 SQICVNYKGYFKCECYPGYE----MDLLTKNCKAAGGKSPSLIFTNRY----EVRRIDLV 438
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RSTI 232
N + I + K+ + LD T ++W D +I MD ++ + +
Sbjct: 439 KRNYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPKEQEVL 491
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
I +++ P GL +D + + +YW D G
Sbjct: 492 IDEQLHSPEGLAVDW------------------------------VHKHIYWTDSGNK-- 519
Query: 293 PLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
I A +DG L S L E A+A+D G +Y W+DWG+ +IE
Sbjct: 520 --TISVATVDGGRRRTLFSRNLSEPRAIAVDPLRGFMY-----------WSDWGDQAKIE 566
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL + ++ G R+ +I
Sbjct: 567 KSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTLI 622
>gi|321465341|gb|EFX76343.1| hypothetical protein DAPPUDRAFT_306243 [Daphnia pulex]
Length = 883
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 132/405 (32%), Positives = 183/405 (45%), Gaps = 90/405 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L KVCDG DC DE G C + EC G C +TC T G C C PG LS+
Sbjct: 332 CIGLDKVCDGVDDCGQWQDEPKGKCSVNECSVNNGGCMHTCTDTTWGFRCGCHPGYTLSD 391
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFL---- 118
+S TC D++EC +PG CSQ C N KGS+ C C GY + +D CKA +A L
Sbjct: 392 NS-TCVDVDECLEPGTCSQTCINEKGSFKCECLTGYTRDPHDRTHCKANEGHSALLFTHG 450
Query: 119 ---------------IISNRHSILVADLE-EKG-------KDHR----------AQDIVV 145
I++ S D E G D R + +V
Sbjct: 451 TDIRRFSLDRRDLTSIVNETRSSTALDFHFESGMLYWSDINDRRIYKAPIDEGETKAVVA 510
Query: 146 SG-LDLVEGLAYDWIGGHIYWLDSR----LNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
SG + +GLA DWI H+YW DS ++ I+V D G R L + + QPR + +D
Sbjct: 511 SGHVVKADGLAVDWIYRHLYWTDSSKESLVSSIQVSDLEGGFRKTLLTEGLQQPRSIAVD 570
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G WL+W+DWG RIER G+DGS+R +I + I WPNG+TLD RR+++ D+K+D
Sbjct: 571 PLEG--WLYWSDWGGASRIERSGLDGSHRQVLIDSHIKWPNGITLDRVDRRLFWVDAKMD 628
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
IG N DGSN ++ LA
Sbjct: 629 M----------------------------------IGSCNYDGSNRRVV--------LAA 646
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
G + ++ W++W+DW + +G N +++ T
Sbjct: 647 GPAIGHPFAVSVF-EDWIYWSDWDHRTIMRANKFNGKNATSVTQT 690
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 182/454 (40%), Gaps = 111/454 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADE---GPG--------CDLAECKHKFGLCSNT--CHPTPLGA 51
C++ + CDG +DCP+G+DE P CD EC CS C+ T
Sbjct: 250 CIHSSWQCDGDSDCPDGSDERNCSPSTCRPDQFRCDDGECIPGHLQCSGAAECNDTSDET 309
Query: 52 LCT--------------CPPGEILSNDSVTCQDMNECEQ-----------------PGYC 80
C C G + D V C +++C Q G C
Sbjct: 310 SCNGTISTGCNPESEFDCGGGMCIGLDKV-CDGVDDCGQWQDEPKGKCSVNECSVNNGGC 368
Query: 81 SQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH-----SAAFLIISNRHSILVADLEEKG 135
CT+T + C C+ GY L DN TC ++ + + I+ + S L
Sbjct: 369 MHTCTDTTWGFRCGCHPGYTLS-DNSTCVDVDECLEPGTCSQTCINEKGSFKCECLTGYT 427
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
+D D A + ++ + + R + D IV + T
Sbjct: 428 RDPH---------DRTHCKANEGHSALLFTHGTDIRRFSL-DRRDLTSIVNETRSST--- 474
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMD-GSNRSTIISTKIYWPNGLTLDIATRRVYF 254
LD + L+W+D + RI + +D G ++ + S + +GL +D
Sbjct: 475 --ALDFHFESGMLYWSDINDR-RIYKAPIDEGETKAVVASGHVVKADGLAVDW------- 524
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
I+R LYW D + I ++++G L++ L
Sbjct: 525 -----------------------IYRHLYWTDSSKESLVSSIQVSDLEGGFRKTLLTEGL 561
Query: 315 YE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
+ ++A+D G WL+W+DWG RIER G+DGS+R +I + I WPNG
Sbjct: 562 QQPRSIAVDPLEG-----------WLYWSDWGGASRIERSGLDGSHRQVLIDSHIKWPNG 610
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+TLD RR+++ D+K+D I CNYDG+ R+ V+
Sbjct: 611 ITLDRVDRRLFWVDAKMDMIGSCNYDGSNRRVVL 644
>gi|332809037|ref|XP_003308157.1| PREDICTED: low-density lipoprotein receptor-related protein 8
isoform 1 [Pan troglodytes]
Length = 901
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 153/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C +G C CP G L
Sbjct: 308 CVLAIKHCNQEQDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECACPAGFQLL 366
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ P CSQ+C N KG + C C GY ++ CKA + LI +N
Sbjct: 367 -DQKTCGDIDECKDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAAGKSPSLIFTN 425
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D + Q
Sbjct: 426 RHEVRRIDLVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPKEQ 485
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++++ L EGLA DW+ HIYW DS I V +G R L N+++PR + +D
Sbjct: 486 EVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRRTLFSRNLSEPRAIAVD 545
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG+ +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 546 PLRG--FMYWSDWGDQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 602
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 175/416 (42%), Gaps = 79/416 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTC--HPTPLGALCTCPPGEIL 61
CV+L CDG DC + +DE C L C+ +F TC CP G
Sbjct: 269 CVHLGWRCDGDRDCKDKSDEA-DCPLGTCRGDEFQCGDGTCVLAIKHCNQEQDCPDG--- 324
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SAA 116
S+++ Q +NEC G CS +CT+ K + C+C G+ L D TC I+ A
Sbjct: 325 SDEAGCLQGLNECLHNNGGCSHICTDLKIGFECACPAGFQL-LDQKTCGDIDECKDPDAC 383
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
I N + + D++ G + I + + + RI++
Sbjct: 384 SQICVNYKGYFKCECYPGYE----MDLLTKNCKAAAGKSPSLIFTNRH----EVRRIDLV 435
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RSTI 232
N + I + K+ + LD T ++W D +I MD ++ + +
Sbjct: 436 KRNYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPKEQEVL 488
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
I +++ P GL +D + + +YW D G +
Sbjct: 489 IDEQLHSPEGLAVDW------------------------------VHKHIYWTDSGNKTI 518
Query: 293 PLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
+ A +DG L S L E A+A+D G +Y W+DWG+ +IE
Sbjct: 519 SV----ATVDGGRRRTLFSRNLSEPRAIAVDPLRGFMY-----------WSDWGDQAKIE 563
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL + ++ G R+ +I
Sbjct: 564 KSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKMLI 619
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL--AKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D +G NR +L + D ++ P G+
Sbjct: 573 QTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKMLISSTDFLSHPFGIA 632
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 633 VFEDK----VFWTD 642
>gi|301759957|ref|XP_002915805.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
[Ailuropoda melanoleuca]
Length = 918
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 153/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DC +G+DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 266 CVPTIKRCNQEQDCLDGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECTCPTGYQLL 324
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG + C C+ GY ++ CKA+ + LI +N
Sbjct: 325 -DQKTCGDIDECEDPDACSQICINYKGYFKCECHSGYEMDTLTKNCKAVAGRSPSLIFTN 383
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D Q
Sbjct: 384 RHEVRRIDLVKRDYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPAEQ 443
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+++V L EGLA DW+ HIYW DS I V +G R L ++++PR + +D
Sbjct: 444 EVLVDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATIDGGRRCTLFSRDLSEPRAIAVD 503
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG +IE+ G++G++R T++S I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 504 PLRG--FMYWSDWGYQAKIEKSGLNGADRQTLVSDNIEWPNGITLDLLNQRLYWVDSKL 560
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 148/356 (41%), Gaps = 72/356 (20%)
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SAA 116
S+++ Q +NEC G CS +CT+ K + C+C GY L D TC I+ A
Sbjct: 283 SDEAGCLQGLNECLHNNGGCSHICTDLKIGFECTCPTGYQL-LDQKTCGDIDECEDPDAC 341
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
I N + + D + V G + I + + + RI++
Sbjct: 342 SQICINYKGYFKCECHSGYE----MDTLTKNCKAVAGRSPSLIFTNRH----EVRRIDLV 393
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RSTI 232
+ + I + K+ + LD T ++W D +I MD ++ + +
Sbjct: 394 KRDYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPAEQEVL 446
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
+ +++ P GL +D + + +YW D G
Sbjct: 447 VDEQLHSPEGLAVDW------------------------------VHKHIYWTDSGNK-- 474
Query: 293 PLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
I A +DG L S L E A+A+D G +Y W+DWG +IE
Sbjct: 475 --TISVATIDGGRRCTLFSRDLSEPRAIAVDPLRGFMY-----------WSDWGYQAKIE 521
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ G++G++R T++S I WPNG+TLD+ +R+Y+ DSKL + + G R+ +I
Sbjct: 522 KSGLNGADRQTLVSDNIEWPNGITLDLLNQRLYWVDSKLHQLSSIDLSGGNRKMLI 577
>gi|327271173|ref|XP_003220362.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
[Anolis carolinensis]
Length = 936
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 156/302 (51%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ KVCD DC + +DE C + EC G CS+TC +G C CP G L
Sbjct: 327 ECIEEVKVCDSHRDCRDWSDEPLKACGVNECALNNGGCSHTCRDLKIGYTCECPQGYKLL 386
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG Y C C EGY ++ + CKA+ S +LI +N
Sbjct: 387 -DKKTCGDIDECENPDACSQICINYKGDYKCECYEGYEMDTLSKNCKAVGKS-PYLIFTN 444
Query: 123 RHSILVADLEEKG--------KDHRAQDIVV----------------------------- 145
RH + DL ++ K+ A D+ V
Sbjct: 445 RHEVRKIDLVKRDYSRIIPMLKNVVALDVEVATNRIYWCDLFYRKIYSAYIDKASNTADQ 504
Query: 146 -----SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
S L+ EGLA DW+ +IYW DS I V +G+ R L N+++PR + +D
Sbjct: 505 MVLVDSELNSPEGLAMDWVHKNIYWTDSGNKTISVATTDGSKRRTLFSTNLSEPRAIAVD 564
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++W+DWG+ +IE+ G++G +R +++ I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 565 PTRG--FMYWSDWGDIAKIEKAGLNGVDRQVLVTDNIEWPNGITLDLLNQRLYWVDSKLH 622
Query: 261 FI 262
+
Sbjct: 623 LL 624
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 182/450 (40%), Gaps = 85/450 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECK--HKFGLCSNTCHPTPLGALCTCPPGEIL- 61
C++ K C+ DCP+ +DE + A C+ +KF S C + + C
Sbjct: 287 CIHGAKQCNKVHDCPDNSDEAGCVNEAACESPNKFQCKSGEC----IEEVKVCDSHRDCR 342
Query: 62 --SNDSVTCQDMNECE-QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL 118
S++ + +NEC G CS C + K Y C C +GY L D TC I+
Sbjct: 343 DWSDEPLKACGVNECALNNGGCSHTCRDLKIGYTCECPQGYKL-LDKKTCGDIDECENPD 401
Query: 119 IISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDE 178
S D + + + D + V Y I+ + +I++
Sbjct: 402 ACSQICINYKGDYKCECYEGYEMDTLSKNCKAVGKSPY-----LIFTNRHEVRKIDLVKR 456
Query: 179 NGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRST----IIS 234
+ + I + K+ + LD T ++W D +I +D ++ + ++
Sbjct: 457 DYSRIIPMLKNVVA------LDVEVATNRIYWCDLFYR-KIYSAYIDKASNTADQMVLVD 509
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
+++ P GL +D + + +YW D G + +
Sbjct: 510 SELNSPEGLAMDW------------------------------VHKNIYWTDSGNKTISV 539
Query: 295 KIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
A DGS L S L E A+A+D G +Y W+DWG+ +IE+
Sbjct: 540 ----ATTDGSKRRTLFSTNLSEPRAIAVDPTRGFMY-----------WSDWGDIAKIEKA 584
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
G++G +R +++ I WPNG+TLD+ +R+Y+ DSKL + +++G R+ +++
Sbjct: 585 GLNGVDRQVLVTDNIEWPNGITLDLLNQRLYWVDSKLHLLSSVDFNGNNRK------VLI 638
Query: 413 EFTNDLMGDNGVPALA-----LDLENGMLY 437
+DL G+ DLEN ++
Sbjct: 639 SSVDDLSHPFGIAVFEDRVFWTDLENEAIF 668
>gi|41016740|dbj|BAC02725.2| vitellogenin receptor [Periplaneta americana]
Length = 1809
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/341 (34%), Positives = 164/341 (48%), Gaps = 53/341 (15%)
Query: 2 ADR--CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGE 59
ADR CV + ++CDG C +G+DEGP C+ + CS+ C P+P G LC C G
Sbjct: 202 ADRQECVEVRELCDGTPHCYDGSDEGPACNASRAACPTVGCSHQCIPSPQGPLCVCQVG- 260
Query: 60 ILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI 119
+ D+ TC D++EC + G C Q C N +GSY C C+EGY + D +CKA A L
Sbjct: 261 YKTVDNKTCVDVDECMEYGICDQRCRNLQGSYSCYCDEGYEVGSDKRSCKATGPDALMLF 320
Query: 120 ISNR-----------HSILVADLEE------------------------KGKD--HRAQD 142
S + + ++ LE + KD +
Sbjct: 321 SSTKEIRGLYVHKDFYYVVAQSLERAVGISYDGNHVYWTELMLGEEAIVRSKDDGSHIEA 380
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
IV +G+ E LA DWI G+IY+ D I VC NG++ VL ++I +PR + L P
Sbjct: 381 IVTAGVYQPEDLAVDWITGNIYFTDMEAQHIGVCVNNGSSCAVLVNEDIDKPRAIALMPL 440
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +FW+DWGE P I R GMDGS +ST + +PNGLT+D R+Y+ D+KL I
Sbjct: 441 EG--LMFWSDWGERPLIARAGMDGSQPEVFVSTDLRFPNGLTIDYHNSRLYWVDAKLLVI 498
Query: 263 DCKSLE-----------IKTNVNYSTIFRKLYWIDEGGNGV 292
+ L+ +K + LYW D G +
Sbjct: 499 ESIKLDGSDRRVVLKDVVKHPYAIAVFEDTLYWSDWHGRDI 539
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 161/343 (46%), Gaps = 64/343 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C++L+ C+ K +C +G+DEG CD+A C K C C PT T G +LS+
Sbjct: 1246 QCISLSLACNNKRNCEDGSDEGGQCDIA-CNAK-SPCDQICQPTLAAQDATVHKGYVLSS 1303
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D C D++ECE G C+Q+C NT+GS+ CSC+ G+ L D+ +CKA+ F I S
Sbjct: 1304 DGAKCGDIDECEIGGACAQVCHNTRGSFSCSCHPGFQLRSDHVSCKALGEPMQF-IFSAG 1362
Query: 124 HSILVADLEEKGKD--HRAQDIVVSGLDLVEG---------------------------- 153
+ I E + D + ++ V+GLD+
Sbjct: 1363 NQIRKVSHELRFTDVVYPEAELKVTGLDVDSASNEVYWSTDVTSTIYRLSLRGGEKAYAT 1422
Query: 154 -------LAYDWIGGHIYWLD-SRLNRIEVC--DENGTNRIVLAKDNITQPRGMMLDPSP 203
+A DWI ++Y++D S I C DE+ ++++ + + P+ + +DP
Sbjct: 1423 GIGTPGDIAVDWISRNVYYVDKSTPQAIRACNLDEHRCAKVLVIEHGFSVPK-IAVDPIA 1481
Query: 204 GTRWLFW---TDW--GE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
G ++FW T W GE + + R + G +++ I + + NGLTLDI +R+YFAD
Sbjct: 1482 G--FIFWPEVTKWVFGEPSTDLFRSELTGRHKTMIETNNLMLVNGLTLDIVRQRIYFADQ 1539
Query: 258 KLDFIDC------------KSLEIKTNVNYSTIFRKLYWIDEG 288
I+C + ++ ++ + LYW+ G
Sbjct: 1540 HKRTIECMDYNGEDRHIIVHNEHVQNPIDMALFEGTLYWLTAG 1582
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 164/425 (38%), Gaps = 88/425 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS- 62
+C+ VCDG DC +G+DE + A C+ L S+ P P C G+ +S
Sbjct: 1200 KCIPSEWVCDGINDCGDGSDE----NNARCQ----LPSSVGTPGPCTDY-ACNDGQCISL 1250
Query: 63 ----NDSVTCQDMNE--------CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110
N+ C+D ++ C C Q+C T + + ++GYVL D C
Sbjct: 1251 SLACNNKRNCEDGSDEGGQCDIACNAKSPCDQICQPTLAAQDATVHKGYVLSSDGAKCGD 1310
Query: 111 INH----SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
I+ A + N G R+ + L G + ++
Sbjct: 1311 IDECEIGGACAQVCHNTRGSFSCSCH-PGFQLRSDHVSCKAL-----------GEPMQFI 1358
Query: 167 DSRLNRI-EVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD 225
S N+I +V E +V + + + LD + ++W+ I R+ +
Sbjct: 1359 FSAGNQIRKVSHELRFTDVVYPEAEL---KVTGLDVDSASNEVYWST-DVTSTIYRLSLR 1414
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
G ++ +T I P + +D +R VY+ D
Sbjct: 1415 GGEKA--YATGIGTPGDIAVDWISRNVYYVDKS--------------------------- 1445
Query: 286 DEGGNGVPLKIGKANMDGSN-ASILV--SGQLYEALALDLENGMLYYSTLKCTRWLFWTD 342
P I N+D A +LV G +A+D G +++ + T+W+F
Sbjct: 1446 ------TPQAIRACNLDEHRCAKVLVIEHGFSVPKIAVDPIAGFIFWPEV--TKWVF--- 1494
Query: 343 WGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
GE + + R + G +++ I + + NGLTLDI +R+YFAD I+ +Y+G
Sbjct: 1495 -GEPSTDLFRSELTGRHKTMIETNNLMLVNGLTLDIVRQRIYFADQHKRTIECMDYNGED 1553
Query: 402 RQQVI 406
R ++
Sbjct: 1554 RHIIV 1558
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/326 (19%), Positives = 123/326 (37%), Gaps = 84/326 (25%)
Query: 79 YCSQMC---TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI---------------- 119
+CS +C N +Y C+C E L D HTC I ++
Sbjct: 585 WCSDICLLAPNKTYTYTCACPENKQLGADKHTCHEIRKQELVVVAAGHKLTAVGHQFLGR 644
Query: 120 -------ISNRHSI------------LVADLEEK-----GKDHRAQDIVVSGLDLVEGLA 155
+ N H+I ++ D E++ G +++S + ++ +
Sbjct: 645 QTLYDMTLKNVHTIGAVTYNSLTDHIIIFDSEQQKLFTLGLKTMKLSLLLSHVGKIDAMD 704
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ-PRGMMLDPSPGTRWLFWTDW- 213
+D++G ++YW D +E+ N R +L + P + + P G ++ ++
Sbjct: 705 FDYMGNNLYWCDGERATVEILSLNTMERAILIHTLEGEIPLDVAVIPEEGVMFVAFSRHV 764
Query: 214 -GENPRIERIGMDGSNRST-IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
G+ P I+R+ MDG T +I T + P
Sbjct: 765 IGDGPHIDRMNMDGRGAHTHVIETSLDGP-----------------------------II 795
Query: 272 NVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN-GMLYYS 330
++ Y + +++W D +IG A DG + + S E +D+ + G +
Sbjct: 796 SLFYDSDLHRVFWTDPNNE----EIGSAAADGMDQHVFRSD--VEGSPIDIASVGRDMFW 849
Query: 331 TLKCTRWLFW-TDWGENPRIERIGMD 355
T+ +L+W + + R++R+ +D
Sbjct: 850 TMWAHPYLYWASKFNSQSRMKRLLLD 875
>gi|390338381|ref|XP_785482.3| PREDICTED: low-density lipoprotein receptor-related protein 4-like
[Strongylocentrotus purpuratus]
Length = 1990
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 135/427 (31%), Positives = 202/427 (47%), Gaps = 108/427 (25%)
Query: 3 DRCVNLTKVCDGKTDCPNGADE-----GPGCDL----AECKHKFGLCSNTCHPTPLGALC 53
DRC+ KVC+G+ DC +G+DE GP C++ + C G C +TC G C
Sbjct: 323 DRCIGNRKVCNGRDDCGDGSDELVEPDGP-CNIIDPSSSCHSNDGGCEHTCTDVSSGVRC 381
Query: 54 TCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH 113
+C G L + TC+D++EC G CSQ CTNT GS++C+C EGY L D TCKA
Sbjct: 382 SCREGYTLDMNGKTCRDIDECLVEGICSQTCTNTLGSFLCTCIEGYELRLDGKTCKA-QG 440
Query: 114 SAAFLIISNR------------HSILVADLEEK-GKDHRAQ------------------- 141
+L+ +NR ++ ++ LE D+ +
Sbjct: 441 PEPYLLFANRIDIRRLEPLHSSYTPILRGLENAIALDYHIEQQLVFWSDVSLDSIKRAYL 500
Query: 142 ------DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D+V +GL+ G+A DWIG ++W DS ++IEV +G++R VL + + +PR
Sbjct: 501 NGTEVMDVVSTGLESPGGVAVDWIGNKLFWSDSGTSKIEVSHLDGSSRSVLIWEGLEKPR 560
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ L P GT LFW+D G + +IE +DGS+RS I T ++WPNGLTLD AT ++++A
Sbjct: 561 ALALHPVKGT--LFWSDSGTS-KIEVSHLDGSSRSVIADTMLFWPNGLTLDYATEKLFWA 617
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+K I+ AN+DG+ I+++ L
Sbjct: 618 DAKHHSIE----------------------------------SANLDGTGRKIVINQGLP 643
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNG 372
A+ L +Y WTDW N + GMD TII ++++P
Sbjct: 644 HPFAITLFEDYIY-----------WTDWHTKSINTANKFTGMD----LTIIQGQLHFP-- 686
Query: 373 LTLDIAT 379
+DI T
Sbjct: 687 --MDIHT 691
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 127/261 (48%), Gaps = 56/261 (21%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE----- 132
G CS +C Y C+C G ++ DN +C + + FL+ +N SI ++
Sbjct: 1319 GGCSHLCLPNPQGYSCACPTGIIINPDNKSCPEV--PSTFLLFANSQSIRRISMDTPDHT 1376
Query: 133 ------EKGKDHRAQD------------------------------IVVSGLDLVEGLAY 156
E K+ A D ++ GL+ +G+A
Sbjct: 1377 DVSLPFENLKNAVALDFDSIDRKIYFTDVFLDVIGRADYDGNNMEVVISEGLETTDGIAV 1436
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DWIG ++YW D+ LN IEV +GT R V+ + +PR + L PS G ++FW+DWG +
Sbjct: 1437 DWIGRNLYWTDTGLNHIEVARLDGTARKVVVSSGLQEPRAIALFPSAG--YMFWSDWGNH 1494
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV--- 273
P+IER DG+ R T+I+T++ WPNGLT+D A RR+Y+ D+ LD I+ K V
Sbjct: 1495 PKIERAHFDGTGRRTLINTELGWPNGLTIDYAMRRLYWVDAYLDKIETADFSGKFRVVLT 1554
Query: 274 -NYST-------IFRKLYWID 286
N +T + +L+W D
Sbjct: 1555 SNVTTHSFGLTMVSSRLFWTD 1575
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 177/419 (42%), Gaps = 97/419 (23%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEE-- 133
G CS +C + + Y C+C G +L D TC+ FL+ +++ I V LE
Sbjct: 1013 GGCSHLCLLSPSPPGYTCACPTGIMLMDDGLTCRL--DLDKFLVFAHKTDIRVVSLEAPY 1070
Query: 134 --------KG---------------------KDHRAQDIVVSGLDL----------VEGL 154
KG H + ++GLD+ VEG+
Sbjct: 1071 AVDVVLPIKGITNVVTVDVDTVQRKLYWADKTTHTIKRSSLNGLDVEAVFDMCLDTVEGI 1130
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G +YW D+ RIEV D NG+NR VL ++ +PRG+ L R++FWTDWG
Sbjct: 1131 TVDSGGQKLYWTDAGRKRIEVADVNGSNRKVLVWRDLEEPRGIALHTK--RRFMFWTDWG 1188
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE------ 268
PRIER GMDG+ R II++ + WPNG+++D +T RV++ D++ + ++ SL+
Sbjct: 1189 SIPRIERAGMDGTGREAIITSNLEWPNGVSVDESTDRVFWVDARTERLESCSLDGSSRRL 1248
Query: 269 -----IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG--QLYEALALD 321
+ + + +YW D V DGS A L+ L + A+D
Sbjct: 1249 LVYDGVDHPYGLTVMDDYIYWTDWDTGAVHR---ADKQDGSGAIDLLGNFDSLMDIKAVD 1305
Query: 322 LEN-----------GMLY--------YSTLKCTRWLFWTD-------------WGENPRI 349
++N G + YS T + D + + I
Sbjct: 1306 IQNKGQSLCGSDNGGCSHLCLPNPQGYSCACPTGIIINPDNKSCPEVPSTFLLFANSQSI 1365
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVYFADSKLDFIDFCNYDGTGRQQVI 406
RI MD + + + N + LD + R++YF D LD I +YDG + VI
Sbjct: 1366 RRISMDTPDHTDVSLPFENLKNAVALDFDSIDRKIYFTDVFLDVIGRADYDGNNMEVVI 1424
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 110/224 (49%), Gaps = 50/224 (22%)
Query: 141 QDIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
Q++++S +D GL+ DWI G IYW ++ NRIEV + +G+ R VL + + +PR +++
Sbjct: 809 QEVILSHNMDSPAGLSIDWITGKIYWAEATNNRIEVANTDGSMRSVLVWEGLDRPRDIIV 868
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP + ++WTDWG +P+IE GMDGS R ++S + WPNGL LD +R
Sbjct: 869 DPI--SSLMYWTDWGSDPKIECSGMDGSERKVLVSYGLIWPNGLVLDRDLQR-------- 918
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
LYW D G +I +N+DGS IL+S +
Sbjct: 919 ----------------------LYWADAGTK----RIEFSNLDGSYREILISLNVPHPFG 952
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG-MDGSNRSTI 362
L + + +Y WTDW E +E+ M G R T+
Sbjct: 953 LAIHDDHIY-----------WTDW-ETKSVEKANKMSGLRRETV 984
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 111/231 (48%), Gaps = 39/231 (16%)
Query: 194 PRGMMLDPS-------PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 246
P G++++P P T LF + I RI MD + + + N + LD
Sbjct: 1337 PTGIIINPDNKSCPEVPSTFLLF----ANSQSIRRISMDTPDHTDVSLPFENLKNAVALD 1392
Query: 247 IAT--RRVYFADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+ R++YF D LD I + LE + I R LYW D G N
Sbjct: 1393 FDSIDRKIYFTDVFLDVIGRADYDGNNMEVVISEGLETTDGIAVDWIGRNLYWTDTGLNH 1452
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
+ + A +DG+ ++VS L E A+ L ++FW+DWG +P+IER
Sbjct: 1453 IEV----ARLDGTARKVVVSSGLQEPRAIAL---------FPSAGYMFWSDWGNHPKIER 1499
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
DG+ R T+I+T++ WPNGLT+D A RR+Y+ D+ LD I+ ++ G R
Sbjct: 1500 AHFDGTGRRTLINTELGWPNGLTIDYAMRRLYWVDAYLDKIETADFSGKFR 1550
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 124/252 (49%), Gaps = 46/252 (18%)
Query: 163 IYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI 222
++ ++ + RI ++G++ +VL + Q + D G +++W D N +I R
Sbjct: 746 LFSRETDIRRISFDTDDGSD-VVLPLSGLKQAVALDWDDEDGG-FVYWGDVSTN-KINRA 802
Query: 223 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
+GS++ I+S + P GL++D T ++Y+A++ +
Sbjct: 803 RWNGSDQEVILSHNMDSPAGLSIDWITGKIYWAEATNN---------------------- 840
Query: 283 YWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD 342
+I AN DGS S+LV +E L + + S+L ++WTD
Sbjct: 841 ------------RIEVANTDGSMRSVLV----WEGLDRPRDIIVDPISSL-----MYWTD 879
Query: 343 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
WG +P+IE GMDGS R ++S + WPNGL LD +R+Y+AD+ I+F N DG+ R
Sbjct: 880 WGSDPKIECSGMDGSERKVLVSYGLIWPNGLVLDRDLQRLYWADAGTKRIEFSNLDGSYR 939
Query: 403 QQVILIDLMVEF 414
+ +I +++ F
Sbjct: 940 EILISLNVPHPF 951
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 137/339 (40%), Gaps = 62/339 (18%)
Query: 80 CSQMCTNTKGSYI-CSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH 138
CS +C I C C G+ L H + I+ ++L+ S I +
Sbjct: 709 CSHLCLQRGTEAITCGCPTGFKLINRTHCAETID---SYLLFSRETDIRRISFDTDD--- 762
Query: 139 RAQDIVVSGLDLVEGLAYDWI---GGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D+V+ L + +A DW GG +YW D N+I NG+++ V+ N+ P
Sbjct: 763 -GSDVVLPLSGLKQAVALDWDDEDGGFVYWGDVSTNKINRARWNGSDQEVILSHNMDSPA 821
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G+ +D G ++W + N RIE DGS RS ++ + P + +D
Sbjct: 822 GLSIDWITGK--IYWAE-ATNNRIEVANTDGSMRSVLVWEGLDRPRDIIVD--------- 869
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
I +YW D G + KI + MDGS +LVS
Sbjct: 870 ---------------------PISSLMYWTDWGSDP---KIECSGMDGSERKVLVS---- 901
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
L NG++ L+ L+W D G RIE +DGS R +IS + P GL
Sbjct: 902 --YGLIWPNGLVLDRDLQ---RLYWADAGTK-RIEFSNLDGSYREILISLNVPHPFGLA- 954
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVI---LIDLM 411
I +Y+ D + ++ N R++ + L DLM
Sbjct: 955 -IHDDHIYWTDWETKSVEKANKMSGLRRETVRAGLEDLM 992
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 122/294 (41%), Gaps = 31/294 (10%)
Query: 128 VADLEEKGKDHRAQD-IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL 186
+ +E G D ++ I+ S L+ G++ D ++W+D+R R+E C +G++R +L
Sbjct: 1190 IPRIERAGMDGTGREAIITSNLEWPNGVSVDESTDRVFWVDARTERLESCSLDGSSRRLL 1249
Query: 187 AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 246
D + P G+ + +++WTDW DGS ++ + +D
Sbjct: 1250 VYDGVDHPYGLTV----MDDYIYWTDWDTGAVHRADKQDGSGAIDLLGNFDSLMDIKAVD 1305
Query: 247 IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP------------L 294
I + S D C L + YS I+ P
Sbjct: 1306 IQNKGQSLCGS--DNGGCSHLCLPNPQGYSCACPTGIIINPDNKSCPEVPSTFLLFANSQ 1363
Query: 295 KIGKANMDGSNAS--ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
I + +MD + + L L A+ALD ++ R +++TD + I R
Sbjct: 1364 SIRRISMDTPDHTDVSLPFENLKNAVALDFDS---------IDRKIYFTDVFLD-VIGRA 1413
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
DG+N +IS + +G+ +D R +Y+ D+ L+ I+ DGT R+ V+
Sbjct: 1414 DYDGNNMEVVISEGLETTDGIAVDWIGRNLYWTDTGLNHIEVARLDGTARKVVV 1467
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 110 AINHSAAFLIIS---NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
A+ SA ++ S N I A + G+ + ++ + L GL D+ +YW+
Sbjct: 1478 ALFPSAGYMFWSDWGNHPKIERAHFDGTGR----RTLINTELGWPNGLTIDYAMRRLYWV 1533
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
D+ L++IE D +G R+VL + T G+ + S LFWTDW N
Sbjct: 1534 DAYLDKIETADFSGKFRVVLTSNVTTHSFGLTMVSSR----LFWTDWQTN 1579
>gi|405974498|gb|EKC39138.1| Low-density lipoprotein receptor-related protein 8 [Crassostrea
gigas]
Length = 901
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/386 (34%), Positives = 191/386 (49%), Gaps = 80/386 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPT-PLGALCTCPPGEILS 62
C+ TK+CD + DC N ADE C+ CK+ G C TC P C C G L+
Sbjct: 287 CIEPTKLCDTRMDCDNYADEENSLCENNACKYNNGGCMQTCIPIDKTNRRCECLHGFRLN 346
Query: 63 NDSVTCQDMNECEQ-PGYCSQMCTNTKGSYICSCNEGY---VLEYDNHTCKAINHSAAFL 118
D+ C+D+NEC+Q P CSQ C N KGSY C C GY +L H CK + A+L
Sbjct: 347 GDTA-CEDINECDQWPPVCSQKCVNEKGSYKCECIPGYYPEILPDGQHICKGVGEK-AWL 404
Query: 119 IISNRHSI------------LVADLE------------------------------EKGK 136
+ +NRH I +V+DL+ EKG+
Sbjct: 405 LFANRHDIRKLEVDGMILQPVVSDLQSAIAVDYDYYNKVVYWSDSHEEKIMKAKMNEKGE 464
Query: 137 -DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
+ A ++ +GL +G+A DWI +IYW D+ N IEV +GT + +L ++ +PR
Sbjct: 465 VNGTAVPVISTGLKTPDGIAVDWIHHNIYWTDTGYNTIEVAPADGTMKKILVDKDLDEPR 524
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDG--SNRSTIISTKIYWPNGLTLDIATRRVY 253
+ +DP G WL+++DWG +P+IERIGMDG ++R+TI+ I WPNGL LD A +VY
Sbjct: 525 SIAVDPRNG--WLYFSDWGTHPKIERIGMDGNLNSRTTIVKDNIQWPNGLCLDYANEKVY 582
Query: 254 FADSKLDFIDCKSLE---IKTNVNYS---------TIFRK-LYWIDEGGNGVPLKIGKAN 300
+ D+KL I L+ +K ++ + TIF +YW D + K+ K
Sbjct: 583 WIDAKLKSIFAAELDGSNVKRILHNAEQILHPFSLTIFEDYVYWTDWSSEAI-RKVHK-- 639
Query: 301 MDGSNASILVSGQLYEALALDLENGM 326
+G+ Y LAL L + M
Sbjct: 640 ---------FTGEEYTQLALGLRSPM 656
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 25/152 (16%)
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE----NPRIER 351
I K +DG +VS L A+A+D + YY+ + ++W+D E ++
Sbjct: 412 IRKLEVDGMILQPVVS-DLQSAIAVDYD----YYNKV-----VYWSDSHEEKIMKAKMNE 461
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
G +IST + P+G+ +D +Y+ D+ + I+ DGT ++ ++ DL
Sbjct: 462 KGEVNGTAVPVISTGLKTPDGIAVDWIHHNIYWTDTGYNTIEVAPADGTMKKILVDKDL- 520
Query: 412 VEFTNDLMGDNGVPALALDLENGMLYYSTEGA 443
+ ++A+D NG LY+S G
Sbjct: 521 ----------DEPRSIAVDPRNGWLYFSDWGT 542
>gi|347963036|ref|XP_311125.5| AGAP000037-PA [Anopheles gambiae str. PEST]
gi|333467390|gb|EAA06523.5| AGAP000037-PA [Anopheles gambiae str. PEST]
Length = 2062
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 133/440 (30%), Positives = 184/440 (41%), Gaps = 99/440 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLG-ALCTCPPGEILSN 63
C+N VCDG TDC NG DE C + C C G C C PG +L
Sbjct: 578 CINQKHVCDGHTDCANGEDEM-RCPIVHPCGAHSRCEQLCITAYSGREECMCRPGYLLHG 636
Query: 64 DSVTCQDMNECE--QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+ C D++EC CSQ C N GS+ CSC GYVL D TCKA+ S L+++
Sbjct: 637 NGYNCTDIDECSITSNPVCSQECLNVAGSFRCSCQPGYVLRPDQRTCKAVGGSVK-LLMA 695
Query: 122 NRHSILVADLEE-------KG---------------------------KDHR----AQDI 143
NR I L KG + H +D+
Sbjct: 696 NRADIRQVSLSNNQYTSIAKGLPNAIALDYHYRQDLLFWTDVSIDVIKRSHLNGSGVRDV 755
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ GL+ GLA DWI ++W DS R+EV +G R V+A ++ +PR + + P
Sbjct: 756 IKWGLESPGGLAVDWIHDLLFWTDSGTRRVEVSTLDGQMRAVIAASDLDKPRAIAV--HP 813
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +FWTDWG P+IER MDGS+R TII+ I+WPNGLT+D + R+Y+AD+K
Sbjct: 814 GRALVFWTDWGTAPKIERAFMDGSDRQTIIAEAIFWPNGLTIDYTSSRIYWADAK----- 868
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
I AN DG ++S L AL L
Sbjct: 869 ------------------------------HVIESANFDGRARRKILSNNLPHPFALALF 898
Query: 324 NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 383
+Y WTDW ++G ++ +++P G+ + Y
Sbjct: 899 EDSMY-----------WTDWHTKTISTASKVNGRG-FRVVHEGLHFPMGI-------QSY 939
Query: 384 FADSKLDFIDFCNYDGTGRQ 403
+ DF + C D GR+
Sbjct: 940 HPSRQPDFTNRCAADKNGRK 959
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 137/331 (41%), Gaps = 92/331 (27%)
Query: 76 QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE--- 132
+ G CS +C + C+C G L D TC + L+I+ + + V L+
Sbjct: 958 RKGGCSHLCLPARTHRRCACPIGLTLRPDQKTCSTV--PDKLLLIARKKDVRVRQLDAAN 1015
Query: 133 -----------------------------EKGKD---------HRAQDIVVSGLDLVEGL 154
+ GK + + IV + L GL
Sbjct: 1016 PVDMVLPLDGIKSTVAVDWCSRTNVIYWTDVGKSMISRAFINGSQQEAIVKANLISPAGL 1075
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DW+ IYW D NRIE +G R +L + + +PR +++ P G ++FW+DWG
Sbjct: 1076 ALDWVTDKIYWTDPGTNRIEAATTDGRQRALLIWERLDKPRDIVVHPGEG--YMFWSDWG 1133
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
NP IER GMDG+ R T++S + WPNGL LD+ +R+YF D KSLE VN
Sbjct: 1134 SNPLIERAGMDGTGRFTLVSENLQWPNGLALDVDKQRLYFLDGGT-----KSLEY---VN 1185
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
Y DG+ + L++ L LD+ +Y
Sbjct: 1186 Y--------------------------DGTGRNRLITEGLKHPFGLDVYEKRVY------ 1213
Query: 335 TRWLFWTDWGENPRIERIGM-DGSNRSTIIS 364
WTDW + I+ M +G +R TI++
Sbjct: 1214 -----WTDW-DTHSIQVANMYNGHDRRTILA 1238
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 126/282 (44%), Gaps = 49/282 (17%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYI 92
C HK G CS C P C CP G L ++ TC+ + +Y+
Sbjct: 1260 CAHKNGGCSYICLLNPTSYSCACPIGIQLKDNGKTCK----------------SGPSNYL 1303
Query: 93 CSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD--------------- 137
+ V + + I+ ISN ++ D++ + +
Sbjct: 1304 VFAHRTEVRQVSLDSDYQIDVVLPLPPISN---VVTLDVDRRTGEIYWADTIEDVIMRST 1360
Query: 138 ---HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
R + I + V+GL D IG +YW D+ +EV D R L ++ QP
Sbjct: 1361 PDGMRIKQIYSESMTSVDGLVIDSIGRKLYWTDAGRKVLEVSDLEEGIRSALVWKDLEQP 1420
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
RG+ LD G +LFW+DWG NPRIER MDG NR +I+ + WPNGL +D A +R+Y+
Sbjct: 1421 RGIALDYESG--YLFWSDWGANPRIERADMDGENRVDLITEGLGWPNGLAVDRAAKRIYW 1478
Query: 255 ADSKLDFIDCKSL------EIKTNVNY----STIFRKLYWID 286
AD+++ I+ +L ++ N+ + + R +YW D
Sbjct: 1479 ADAQMKTIESCTLSGGARTKVVENLPHPYALAVTGRTIYWTD 1520
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 89/156 (57%), Gaps = 12/156 (7%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q IV SGL+ G+A DW+ ++YW D+ L +IEV +G+ R + D + PR ++L
Sbjct: 1674 QVIVSSGLNTPNGIAVDWLADNLYWTDTALKKIEVARLDGSCRKAILTDGLDDPRSIILY 1733
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G ++FW DWG+ P+IER MDGS R +I+ ++ +P GL +D +++Y+AD+ D
Sbjct: 1734 PKRG--FVFWADWGQTPKIERAYMDGSERRSIVDFELGFPTGLAIDFDAKKLYWADALQD 1791
Query: 261 FIDC------KSLEIKTNVNYSTIF----RKLYWID 286
I+ + ++ ++ + F LYW D
Sbjct: 1792 RIELCDFDGRRRQQVVSHATHPFGFTLTATHLYWTD 1827
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 104/205 (50%), Gaps = 32/205 (15%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATR--RVYFADS-------------KLDFID 263
+ ++ +D + ++ N +TLD+ R +Y+AD+ ++ I
Sbjct: 1311 VRQVSLDSDYQIDVVLPLPPISNVVTLDVDRRTGEIYWADTIEDVIMRSTPDGMRIKQIY 1370
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALD 321
+S+ + +I RKLYW D G + + ++++ S LV L + +ALD
Sbjct: 1371 SESMTSVDGLVIDSIGRKLYWTDAGRKVLEV----SDLEEGIRSALVWKDLEQPRGIALD 1426
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 381
E+G +LFW+DWG NPRIER MDG NR +I+ + WPNGL +D A +R
Sbjct: 1427 YESG-----------YLFWSDWGANPRIERADMDGENRVDLITEGLGWPNGLAVDRAAKR 1475
Query: 382 VYFADSKLDFIDFCNYDGTGRQQVI 406
+Y+AD+++ I+ C G R +V+
Sbjct: 1476 IYWADAQMKTIESCTLSGGARTKVV 1500
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 47/213 (22%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDG-SNRSTIISTKIYWPNGLTLDIATRRVYF 254
++LD + ++F+ D + I R+ M S+ I+S+ + PNG+ +D +
Sbjct: 1640 AVVLDYHFDSMYVFYADVNVDA-IRRVNMHNYSDTQVIVSSGLNTPNGIAVD------WL 1692
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS-NASILVSGQ 313
AD+ LYW D KI A +DGS +IL G
Sbjct: 1693 ADN------------------------LYWTDTALK----KIEVARLDGSCRKAILTDG- 1723
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
LD ++ Y ++FW DWG+ P+IER MDGS R +I+ ++ +P GL
Sbjct: 1724 ------LDDPRSIILYPKRG---FVFWADWGQTPKIERAYMDGSERRSIVDFELGFPTGL 1774
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+D +++Y+AD+ D I+ C++DG RQQV+
Sbjct: 1775 AIDFDAKKLYWADALQDRIELCDFDGRRRQQVV 1807
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 12/105 (11%)
Query: 116 AFLIISNRHSILVADLEEKGKDHRA-------QDIVVSGLDLVEGLAYDWIGGHIYWLDS 168
+ ++ R + AD + K RA + IV L GLA D+ +YW D+
Sbjct: 1729 SIILYPKRGFVFWADWGQTPKIERAYMDGSERRSIVDFELGFPTGLAIDFDAKKLYWADA 1788
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
+RIE+CD +G R + + T P G L + L+WTDW
Sbjct: 1789 LQDRIELCDFDGRRRQQVVS-HATHPFGFTLTAT----HLYWTDW 1828
>gi|348550969|ref|XP_003461303.1| PREDICTED: low-density lipoprotein receptor-like [Cavia porcellus]
Length = 837
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/301 (35%), Positives = 158/301 (52%), Gaps = 46/301 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ L +VCDG DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 270 ECITLDRVCDGARDCRDWSDEPLKECGTNECLDNNGGCSHVCNDLKIGYQCLCPSGFHLV 329
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
C+D++EC+QP CSQ+C N +GSY C C +G+ ++ TCKA+ S A+L+ +N
Sbjct: 330 G-QWQCEDIDECQQPDTCSQLCVNLEGSYKCECEDGFHMDASTKTCKAVG-SVAYLLFTN 387
Query: 123 RHSIL------------------VADLEEKGKDHR----------------------AQD 142
RH + V L+ + +R A D
Sbjct: 388 RHEVRRMTPDRSEYTSLVSNLKNVVALDAEVASNRLYWSDVSQRKIYSTQIDRTPGSAHD 447
Query: 143 IVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
V+SG L +GLA DWI G+IYW DS + V D G R L + ++PR +++DP
Sbjct: 448 TVISGDLQAPDGLAVDWIHGNIYWTDSVPGTVSVADTRGVKRRTLFQKKGSKPRAIVVDP 507
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++WTDWG RIE+ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL
Sbjct: 508 VHG--FMYWTDWGTPARIEKGGLNGVDIYSLVTENIEWPNGITLDLSSSRLYWVDSKLHS 565
Query: 262 I 262
I
Sbjct: 566 I 566
>gi|124286870|ref|NP_001074395.1| low-density lipoprotein receptor-related protein 8 precursor [Mus
musculus]
Length = 870
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/298 (35%), Positives = 154/298 (51%), Gaps = 46/298 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CV+ KVCD + DC + +DE C L EC H G CS+ C +G CTCP G L
Sbjct: 218 CVDGGKVCDDQRDCRDWSDEPQKVCGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL- 276
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D TC D++EC+ P CSQ+C N KG + C C+ GY ++ CKA+ + LI +NR
Sbjct: 277 DQKTCGDIDECQDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAVAGKSPSLIFTNR 336
Query: 124 HSILVADLEEKG--------KDHRAQDIVVS----------------------------- 146
H + DL ++ K+ A D+ V+
Sbjct: 337 HEVRRIDLVKRDYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAHMDKASIPDEQV 396
Query: 147 -----GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
L EGLA DW+ HIYW DS I V +G R L +++PR + +DP
Sbjct: 397 VLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATTDGRRRCTLFSRELSEPRAIAVDP 456
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++W+DWG +IE+ G++G++R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 457 LRG--FMYWSDWGFQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 512
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 176/427 (41%), Gaps = 97/427 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT---CPPGEIL 61
CV K C+ + DCP+G+DE GC L +TC P C C G +
Sbjct: 177 CVLAIKRCNQERDCPDGSDEA-GC----------LQESTCE-GPRRFQCKSGECVDGGKV 224
Query: 62 SNDSVTCQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110
+D C+D +NEC G CS +CT+ K + C+C G+ L D TC
Sbjct: 225 CDDQRDCRDWSDEPQKVCGLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGD 283
Query: 111 INH----SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
I+ A I N + + D + V G + I + +
Sbjct: 284 IDECQDPDACSQICVNYKGYFKCECHPGYE----MDTLTKNCKAVAGKSPSLIFTNRH-- 337
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226
+ RI++ + + I + K+ + LD T ++W D +I MD
Sbjct: 338 --EVRRIDLVKRDYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAHMDK 388
Query: 227 SN----RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
++ + +I +++ P GL +D + + +
Sbjct: 389 ASIPDEQVVLIDEQLHSPEGLAVDW------------------------------VHKHI 418
Query: 283 YWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFW 340
YW D G I A DG L S +L E A+A+D G +Y W
Sbjct: 419 YWTDSGNK----TISVATTDGRRRCTLFSRELSEPRAIAVDPLRGFMY-----------W 463
Query: 341 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
+DWG +IE+ G++G++R T++S I WPNG+TLD+ ++R+Y+ DSKL + +++G
Sbjct: 464 SDWGFQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFNGG 523
Query: 401 GRQQVIL 407
R+ +I
Sbjct: 524 NRKMLIF 530
>gi|62822140|gb|AAY14689.1| unknown [Homo sapiens]
Length = 862
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 184/420 (43%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+GK DCP+G+DEG CD EC G CSN C P G +C+CP G L+
Sbjct: 226 CLQPEKLCNGKKDCPDGSDEGYLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLNK 283
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC EG+ L+ D +C +++ AF+I S R
Sbjct: 284 DNKTCEIVDYCSNHLKCSQVCEQHKHTVKCSCYEGWKLDVDGESCTSVDPFEAFIIFSIR 343
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 344 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAIE 403
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 404 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDP 463
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 464 RYGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAR 521
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG+N ++ G Y +
Sbjct: 522 SDAI------------YSALY----------------------DGTNMIEIIRGHEYLSH 547
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 548 PFAVS---LYGSE------VYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYHPS 598
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 119/263 (45%), Gaps = 33/263 (12%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS MC N S C+C L D TC + FL+ + R I D++
Sbjct: 614 GPCSHMCLINHNRSAACACPHLMKLSSDKKTCYEMK---KFLLYARRSEIRGVDIDNPYF 670
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ V +D V + +D +YW D + I+ NGT + +I RG
Sbjct: 671 NFITA-FTVPDIDDVTVIDFDASEERLYWTDIKTQTIKRAFINGTGLETVISRDIQSIRG 729
Query: 197 MMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIIS--------------TKIYWPN 241
+ +D +R L+W + + +I +DGS +++II K+YW +
Sbjct: 730 LAVDWV--SRNLYWISSEFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD 787
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
G T+++A + ++SK+ F + K + +++Y + KLYWI GNG I + N+
Sbjct: 788 GNTINMAN--MDGSNSKILFQNQKE-PVGLSIDY--VENKLYWI-SSGNGT---INRCNL 838
Query: 302 DGSNASILVS--GQLYEALALDL 322
DG N ++ S +L +A AL +
Sbjct: 839 DGGNLEVIESMKEELTKATALTI 861
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 84/210 (40%), Gaps = 50/210 (23%)
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++D L+WTD + I+R ++G+ T+IS I GL +D +R +Y+ S
Sbjct: 686 VIDFDASEERLYWTDI-KTQTIKRAFINGTGLETVISRDIQSIRGLAVDWVSRNLYWISS 744
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG-QLYE 316
+ D E + NV A +DGS + ++ G +
Sbjct: 745 EFD-------ETQINV-------------------------ARLDGSLKTSIIHGIDKPQ 772
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 376
LA G LY W + I MDGSN S I+ P GL++D
Sbjct: 773 CLAAHPVRGKLY--------------WTDGNTINMANMDGSN-SKILFQNQKEPVGLSID 817
Query: 377 IATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
++Y+ S I+ CN DG G +VI
Sbjct: 818 YVENKLYWISSGNGTINRCNLDG-GNLEVI 846
>gi|268560986|ref|XP_002646337.1| Hypothetical protein CBG12050 [Caenorhabditis briggsae]
Length = 4856
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 154/308 (50%), Gaps = 53/308 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C++ ++CDGK DCP+G DEG C + G CS+TC TP G +C+CP L
Sbjct: 1240 QCISDKQLCDGKNDCPSGDDEGMWCSFLCNSTEIG-CSHTCRATPSGPICSCPDEYFLEK 1298
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D VTC + C + G CSQ C + + C C +GY L D +C+ ++ F+I SNR
Sbjct: 1299 DGVTCAKKDPC-RFGQCSQHCMSQGSRHFCYCEDGYKLLNDRISCRTVDPKTEFMIYSNR 1357
Query: 124 HSILVADLEEKGK----------------------------------------DHR---- 139
H I + G D R
Sbjct: 1358 HEIRMIQATSPGSIPLISSLTNAIALDFKYLNNGSLIVYWTDLSSDKIYSGLMDQRTIMY 1417
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
++ IV G+ EG+A DWI G+IYW+DS L+ I+V E+GT R + +N+ R + +
Sbjct: 1418 SRTIVSYGVFNAEGIAVDWITGNIYWIDSHLDTIQVLSEDGTKRATVVNENMGNARSLAI 1477
Query: 200 DPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTI--IS--TKIYWPNGLTLDIATRRVYF 254
D G +FWTDW E NPRIER + G NR+T+ IS + WPNG+ LD T+RVY+
Sbjct: 1478 DVEEG--LMFWTDWEEANPRIERCTLAGKNRATVWKISNVAQAGWPNGIALDTITKRVYW 1535
Query: 255 ADSKLDFI 262
D+K D I
Sbjct: 1536 VDAKSDSI 1543
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 166/422 (39%), Gaps = 102/422 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAE--CKHKFGLCSN--TCHPTPLGALCTCPPGEI 60
C+ ++CDG+ DC +G DE CDL + C C C C+C G
Sbjct: 3051 CLQEHQLCDGRKDCMSGIDEQ--CDLPQGNCSSARNSCEQPWNCKRNAGFETCSCDEGFH 3108
Query: 61 LSN-DSVTCQDMNECEQPGYCSQMCTNTKG-SYICSCNEGYVLEYDNHTCK--------- 109
LS D TC C + CS C + + + C C G++L + C+
Sbjct: 3109 LSPYDKRTCLRSPSCPKAN-CSHFCIDRRDVGHQCFCAPGFILSDNQRDCRRNDTIEPEI 3167
Query: 110 -----------AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDL-------- 150
I+ A ++SN + + D + K D+ SG
Sbjct: 3168 LMVSGHRLKLFTIDGHAKATLLSNLTNGVALDYDVKSDLVYWTDVTNSGNKAGITSMSNQ 3227
Query: 151 --------------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGT-NRIVLAKDNITQPR 195
++G+A DW+G HIY+ D + I VCD G NRI+L + PR
Sbjct: 3228 PYTYRIINSLPTKGIDGIAVDWLGRHIYYTDRNHDAIAVCDMRGRFNRILLKGTPLNDPR 3287
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYF 254
++LDP LFWTDWG + I R+ MDGSN I+ + I WPN L +D +R+YF
Sbjct: 3288 AIVLDPIQA--LLFWTDWGASAHIGRMNMDGSNEMIILEDRTIRWPNALAVDAPAQRLYF 3345
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
D+ D+ I N DG+ +++ +
Sbjct: 3346 GDAHRDY----------------------------------IASCNYDGTKRRMVLRNSV 3371
Query: 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGL 373
AL + +++W+DW N IER+ + G NR +I K Y P G
Sbjct: 3372 RHIFALAVFED-----------YIYWSDW-HNHTIERVHKITGDNRKVLIQDKQYRPMGF 3419
Query: 374 TL 375
+
Sbjct: 3420 KV 3421
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 77/150 (51%), Gaps = 15/150 (10%)
Query: 123 RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGT 181
RHS++V +++ ++G+ EG+AYD+ ++Y D + I V N +
Sbjct: 648 RHSLVVQKMDQSNTTFHG----LTGIMNCEGMAYDYTSDNLYMTDQKRKLITVQRLSNLS 703
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPR--------IERIGMDGSNRSTII 233
+ ++ + N++ PR + + + +LFW W E+ + IER +DGS R T++
Sbjct: 704 VQKIIVRGNMSNPRAIAVHVAKS--YLFWGSWSEDRQNDATTPAMIERSKLDGSERKTLV 761
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFID 263
S W NGLTLD+ +Y+ D+ + I+
Sbjct: 762 SKNSMWINGLTLDLKNDFLYWCDAYRNVIE 791
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 92/235 (39%), Gaps = 57/235 (24%)
Query: 180 GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYW 239
G I+ AK +P + DP G R L + + +++ MD SN + T I
Sbjct: 619 GIPDILAAK----RPSAITFDPK-GKRILMYDLKRHSLVVQK--MDQSNTTFHGLTGIMN 671
Query: 240 PNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKA 299
G+ D + +Y D K RKL + N L + K
Sbjct: 672 CEGMAYDYTSDNLYMTDQK---------------------RKLITVQRLSN---LSVQK- 706
Query: 300 NMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR--------IER 351
I+V G + A+ + Y LFW W E+ + IER
Sbjct: 707 --------IIVRGNMSNPRAIAVHVAKSY---------LFWGSWSEDRQNDATTPAMIER 749
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+DGS R T++S W NGLTLD+ +Y+ D+ + I+ ++G R+ +I
Sbjct: 750 SKLDGSERKTLVSKNSMWINGLTLDLKNDFLYWCDAYRNVIERIRWNGADREVII 804
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 11/125 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSR---LNRIEVCDENGTN-----RIVLAKDNITQP 194
++ + +V +AYD + +Y++ + + RI+V D N N ++VL N +P
Sbjct: 2386 VIAEDVRVVPSMAYDEVNRELYYVSANPAGIWRIDVADNNLENYPTEPKLVLLLTNRDRP 2445
Query: 195 RGMMLDPSPGTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
R + +DP LF+T+ IER G R I+ ++ GL +D+ T ++Y
Sbjct: 2446 RHLAIDPC--RMLLFFTNNAITGSVIERAYFSGYKREQILQEDLHDLRGLAIDLETEKLY 2503
Query: 254 FADSK 258
F+DSK
Sbjct: 2504 FSDSK 2508
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 28/183 (15%)
Query: 242 GLTLDIATRRVYFAD------SKLDF------IDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+ D + R+YFAD S ++F + + + + ++ Y + R+LY++
Sbjct: 2354 AIAADNSRGRIYFADYEKFRISAVNFDGTGCVVIAEDVRVVPSMAYDEVNRELYYVSANP 2413
Query: 290 NGV-PLKIGKANMDGSNAS-----ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
G+ + + N++ +L + LA+D +L+++ T +
Sbjct: 2414 AGIWRIDVADNNLENYPTEPKLVLLLTNRDRPRHLAIDPCRMLLFFTNNAITGSV----- 2468
Query: 344 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403
IER G R I+ ++ GL +D+ T ++YF+DSK I C+ DG R+
Sbjct: 2469 -----IERAYFSGYKREQILQEDLHDLRGLAIDLETEKLYFSDSKDFRISRCDLDGCNRE 2523
Query: 404 QVI 406
VI
Sbjct: 2524 VVI 2526
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 27/142 (19%)
Query: 304 SNASILVSGQLYEALALD---LENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSN-- 358
S SI + L A+ALD L NG L ++WTD + +I MD
Sbjct: 1367 SPGSIPLISSLTNAIALDFKYLNNGSLI---------VYWTDLSSD-KIYSGLMDQRTIM 1416
Query: 359 -RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
TI+S ++ G+ +D T +Y+ DS LD I + DGT R V+ N+
Sbjct: 1417 YSRTIVSYGVFNAEGIAVDWITGNIYWIDSHLDTIQVLSEDGTKRATVV---------NE 1467
Query: 418 LMGDNGVPALALDLENGMLYYS 439
MG+ +LA+D+E G+++++
Sbjct: 1468 NMGN--ARSLAIDVEEGLMFWT 1487
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 18/102 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCH----PTPLGALCTCPPGE 59
+CV L K CDGK DC +G+DE C+ K +N C T G C CP +
Sbjct: 140 QCVPLFKFCDGKLDCSDGSDE-------VCRVKNISTANDCEYGAAITIDGIKCYCPKNK 192
Query: 60 ILSNDSVTCQDMNECEQ-----PGYCSQMCTNTK-GSYICSC 95
L N+ C+ +N+C++ P CSQ CT+ K G++ C C
Sbjct: 193 FL-NEKGKCEFVNQCDRLKNGLPPACSQGCTDNKNGTFSCFC 233
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 23/127 (18%)
Query: 336 RWLFWTDWGENPRIERIGMDGSN-----------RSTIISTKIYWPNGLTLDIATRRVYF 384
R +FWT PRI +DG+ +I I+ P L LD +R+Y+
Sbjct: 4103 RLIFWTTGAPVPRILSAHLDGTPIAQLFKTGSQPHKALIERNIFDPKSLILDSPNKRLYW 4162
Query: 385 ADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAE 444
D ++ +YDG R+ V +L GD+ V ++D+ G +Y T
Sbjct: 4163 IDGFKRTVETVSYDGRDRRTVRKFEL---------GDSPV---SMDIIGGYIYLVTLQGN 4210
Query: 445 FLKTPLF 451
K F
Sbjct: 4211 IHKMHKF 4217
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 109/315 (34%), Gaps = 72/315 (22%)
Query: 9 TKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTC 68
T +CDG DC +G+DE P CK F + C A C +D TC
Sbjct: 3855 TALCDGFKDCSDGSDESPAHCKDMCKGMFRCTNGRC--LDESARCDGRDDCGDGSDEDTC 3912
Query: 69 QDMNECEQPGYCSQMCTNTKGSYI-CSCNEGYVLEYDNHTCKAINH-SAAFLIISNRHSI 126
+C G C Q C S C C+ GY + C+ + + FL R +
Sbjct: 3913 G--LQCHHFGTCPQKCWMAYNSTARCHCDVGYTKSTKYNDCEPLTKFTEIFLSNGKRLHL 3970
Query: 127 LVADLEE-KGKDHRAQDIVVSGLDL----------------------------------- 150
+VA+ + + +I+ G+D
Sbjct: 3971 MVAEETRLRTVFNERMNIISGGIDFGYDMYKTTLMYSVGIGKNRVDIRTKKWSESKPSDE 4030
Query: 151 --------VEGL-AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
GL A+D++ ++Y +S + N I +AK T R ++++
Sbjct: 4031 WGEKNDESTAGLIAHDFMHNNVYLTESGSYIPGILFHTQEN-IYVAKSKDTNTRTLIVNS 4089
Query: 202 S---------PGTRWLFWTDWGENPRIERIGMDGS-----------NRSTIISTKIYWPN 241
+ P R +FWT PRI +DG+ +I I+ P
Sbjct: 4090 TGSITSLSVDPIQRLIFWTTGAPVPRILSAHLDGTPIAQLFKTGSQPHKALIERNIFDPK 4149
Query: 242 GLTLDIATRRVYFAD 256
L LD +R+Y+ D
Sbjct: 4150 SLILDSPNKRLYWID 4164
>gi|444509407|gb|ELV09244.1| Prolow-density lipoprotein receptor-related protein 1 [Tupaia
chinensis]
Length = 4570
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 143/447 (31%), Positives = 204/447 (45%), Gaps = 94/447 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
RCV +C+G+ DC +G+DE GC H G C C PG L +
Sbjct: 2893 RCVAEALLCNGQDDCGDGSDER-GC------HANG--------------CRCRPGFRLKD 2931
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEY-DNHTCKAINHSAAFLIISN 122
D TC D++EC CSQ C NT GSY C C EGY D H+CKA+ FLI +N
Sbjct: 2932 DGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFAN 2991
Query: 123 R-----------------------HS-----------------------ILVADLEEKGK 136
R HS I D+ +G
Sbjct: 2992 RYYLRKLNLDGSNYTLLKQAWPDFHSPPYPQIQGLNNAVALDFDYREQMIYWTDVTTQGS 3051
Query: 137 DHR--------AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK 188
R Q + +GL +GLA DW+GG++YW D + IEV NG R VL
Sbjct: 3052 MIRRMHLNGSNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVS 3111
Query: 189 DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248
+ +PR +++D G +L+WTDWG++ I RIGMDGS+RS I+ TKI WPNGLTLD
Sbjct: 3112 SGLREPRALVVDVQNG--YLYWTDWGDHSLIGRIGMDGSSRSVIVDTKITWPNGLTLDYV 3169
Query: 249 TRRVYFADSKLDFIDCKSL-------EIKTNVNYSTIFR---KLYWIDEGGNGVPLK--- 295
T R+Y+AD++ D+I+ SL E + ++ R L ++G + P
Sbjct: 3170 TERIYWADAREDYIEFASLDGSNRHVEQELAIDSRLAMRPGEPLSIWNQGSHAPPGSRRC 3229
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI-GM 354
+G S+L L A+ ++ ++ +++WTDW E I R
Sbjct: 3230 LGGQQAVCPLHSVLTRAVLGPIPAVLSQDIPHIFALTLFEDYIYWTDW-ETKSINRAHKT 3288
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRR 381
G+N++ +IST ++ P L + A R+
Sbjct: 3289 TGTNKTLLIST-LHRPMDLHVFHALRQ 3314
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 155/304 (50%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1125 CLPPDKLCDGNDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1182
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1183 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1242
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1243 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1302
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1303 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1362
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R T+ + WPNGLT+D +R+ + D++
Sbjct: 1363 RDGI--LFWTDWDASLPRIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDAR 1420
Query: 259 LDFI 262
D I
Sbjct: 1421 SDAI 1424
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 165/319 (51%), Gaps = 57/319 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ ++++C+G DC +G+DEG C +L + G C + C PT G C C L
Sbjct: 92 CIPMSRLCNGVHDCMDGSDEGAHCLELRTNCSRLG-CQHHCVPTLDGPTCYCNNSFQLQA 150
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLII 120
D TC+D +EC G CSQ+CTNT GS+ C C EGY+L+ DN +CKA N L+I
Sbjct: 151 DGKTCKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPVLLI 210
Query: 121 SNRHSIL------------------------------------VADLEEKGK-------- 136
+N +IL V D + +
Sbjct: 211 ANSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDSAAQTQLKCARMPG 270
Query: 137 -----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI 191
D +I +S L VE +A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 271 LKGFVDEHTINISLS-LHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLEL 329
Query: 192 TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R
Sbjct: 330 YNPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRL 387
Query: 252 VYFADSKLDFIDCKSLEIK 270
VY+AD+ LD+I+ E K
Sbjct: 388 VYWADAYLDYIEVVDYEGK 406
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 169/431 (39%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1832 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1888
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1889 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1948
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1949 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2006
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DGS R +++ I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 2007 YPRIERSRLDGSERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGENREV 2066
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2067 VLSSNNMDMFSVSVFEGFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFN 2126
Query: 298 KANMDGSNASILVSGQ-----LYEA---LALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G LY A +GML C + + + E +
Sbjct: 2127 RDRQKGTNVCAVANGGCQQLCLYRGGGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 2186
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2187 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2245
Query: 396 NYDGTGRQQVI 406
N DG+GR ++
Sbjct: 2246 NDDGSGRTTIV 2256
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 173/430 (40%), Gaps = 94/430 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSNT--CHPTPLGALCTCPP 57
RC++ + C+ DC +G+DE C L C +C + C T A C C P
Sbjct: 3781 RCLSSSLRCNMFDDCGDGSDE-EDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRP 3839
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G CQD+NEC + G CSQ+C NTKG ++CSC ++ ++ TCKA
Sbjct: 3840 GFHTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHN--TCKAEGSEYQV 3897
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L I++ + I G H A + G + V R++ ++V
Sbjct: 3898 LYIADDNEIRSL---FPGHPHSAYEQAFQGDESV-----------------RIDAMDVHV 3937
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ G ++WT+W + IS +
Sbjct: 3938 KAGR--------------------------VYWTNW---------------HTGTISYRS 3956
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P + R D + ++ L++ + + +YW D G + + +
Sbjct: 3957 L-PPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEV--- 4012
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A M G N L+SG + E A+ +D G +Y W+DWG +P+IE MD
Sbjct: 4013 -AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMD 4060
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID----LM 411
G+ R T++ I WP GL +D R+Y+AD+KL I + GR ++ D L
Sbjct: 4061 GTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLN--GRDPIVAADSKRGLS 4118
Query: 412 VEFTNDLMGD 421
F+ D+ D
Sbjct: 4119 HPFSIDVFED 4128
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 492 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 550
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 551 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 610
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 611 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 668
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+E+ MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 669 MYWTDWEEDPKDSRRGRLEKAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 728
Query: 261 FID 263
I+
Sbjct: 729 RIE 731
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 16/137 (11%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 301 FYFVDD----IDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAMGK---------VFFT 347
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 348 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 407
Query: 402 RQ---QVILIDLMVEFT 415
RQ Q ILI+ + T
Sbjct: 408 RQTIIQGILIEHLYGLT 424
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 130/337 (38%), Gaps = 66/337 (19%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N + C+C L DN TC FL+ + + I DL+
Sbjct: 1513 GPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1569
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQ- 193
++ V +D V L YD +YW D R I+ NGT +V A N+
Sbjct: 1570 NYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSAAANMDSL 1628
Query: 194 ------PRGMMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLD 246
P L +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1629 LVPPDLPNAHGLAVDWVSRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV- 1686
Query: 247 IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
+ KLYW D G N I ANMDGSN
Sbjct: 1687 -----------------------------HPLRGKLYWTD-GDN-----ISMANMDGSNR 1711
Query: 307 SILVSGQLYE-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
++L SGQ LA+D LY W G N I R +DGS I +
Sbjct: 1712 TLLFSGQKGPVGLAIDFPESKLY-----------WVSSG-NHTINRCNLDGSGLEVIDAM 1759
Query: 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCN-YDGTG 401
+ L I ++++AD + + CN DG+G
Sbjct: 1760 QSQLGKATALAIMGDKLWWADQVSEKMGTCNKADGSG 1796
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2318 ECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2377
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R V+ + + F + G++
Sbjct: 2378 IERCEYDGSHRYVVLKSEPVHPFGLAVYGEH 2408
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 69/146 (47%), Gaps = 11/146 (7%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD---SRLNRIEVCDENGT- 181
I ++++ D + +V + VEGLAY +YW S + R V D++
Sbjct: 2237 IHFGNIQQINDDGSGRTTIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTV-DQSRPG 2295
Query: 182 ---NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKI 237
V+ PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2296 AFERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDI 2353
Query: 238 YWPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2354 RTPNGLAIDHRAEKLYFSDATLDKIE 2379
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 27/183 (14%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYW--LDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+V L GLA DW+ +++W D+ +I V +G+ + + + + QP G+++
Sbjct: 1629 LVPPDLPNAHGLAVDWVSRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVVH 1687
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD---- 256
P G L+WTD G+N I MDGSNR+ + S + P GL +D ++Y+
Sbjct: 1688 PLRGK--LYWTD-GDN--ISMANMDGSNRTLLFSGQ-KGPVGLAIDFPESKLYWVSSGNH 1741
Query: 257 ---------SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN-MDGSNA 306
S L+ ID ++ + + KL+W D+ V K+G N DGS +
Sbjct: 1742 TINRCNLDGSGLEVIDAMQSQLGKATALAIMGDKLWWADQ----VSEKMGTCNKADGSGS 1797
Query: 307 SIL 309
+L
Sbjct: 1798 VVL 1800
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 27/171 (15%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRW 337
+ R L+W N + + A +DGS + +V G L+ +G++ +
Sbjct: 1645 VSRNLFWTSYDTNKKQINV--ARLDGSFKNAVVQG-------LEQPHGLVVHPLRG---K 1692
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
L+WTD G+N I MDGSNR+ + S + P GL +D ++Y+ S I+ CN
Sbjct: 1693 LYWTD-GDN--ISMANMDGSNRTLLFSGQ-KGPVGLAIDFPESKLYWVSSGNHTINRCNL 1748
Query: 398 DGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKT 448
DG+G + + D M A AL + L+++ + +E + T
Sbjct: 1749 DGSGLEVI-----------DAMQSQLGKATALAIMGDKLWWADQVSEKMGT 1788
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 34/163 (20%)
Query: 298 KANMDGSNASILVSG-------------QLYEALALDLENGMLYYSTLKCTRWLFWTD-W 343
K N+DGSN ++L L A+ALD + Y + ++WTD
Sbjct: 2997 KLNLDGSNYTLLKQAWPDFHSPPYPQIQGLNNAVALDFD----YREQM-----IYWTDVT 3047
Query: 344 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403
+ I R+ ++GSN + T + P+GL +D +Y+ D D I+ +G R
Sbjct: 3048 TQGSMIRRMHLNGSNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRT 3107
Query: 404 QVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFL 446
++ L AL +D++NG LY++ G L
Sbjct: 3108 VLVSSGLREPR-----------ALVVDVQNGYLYWTDWGDHSL 3139
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2358 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVVLKSEPVHPFGLAV----YGEHIFWTD 2413
Query: 213 W 213
W
Sbjct: 2414 W 2414
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1244 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1293
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1294 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1344
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1345 ---TTLLAGDIEHPRAIALDPRDGILFWT 1370
>gi|45383976|ref|NP_990517.1| low-density lipoprotein receptor-related protein 8 precursor
[Gallus gallus]
gi|47117286|sp|Q98931.1|LRP8_CHICK RecName: Full=Low-density lipoprotein receptor-related protein 8;
Short=LRP-8; AltName: Full=Apolipoprotein E receptor 2;
AltName: Full=Protein LR8B; Flags: Precursor
gi|1595750|emb|CAA65729.1| LR8B [Gallus gallus]
Length = 917
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 156/304 (51%), Gaps = 47/304 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ KVCD DC + +DE C + EC G CS+ C +G C CPPG L
Sbjct: 325 ECIDGGKVCDLHRDCRDWSDEPLKECGINECSLNNGGCSHICKDLKIGYECECPPGYKLL 384
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG Y C C EGY ++ + CKA+ S +LI +N
Sbjct: 385 -DKKTCGDIDECENPDACSQICINYKGDYKCECYEGYEMDTLSKNCKAVGKS-PYLIFTN 442
Query: 123 RHSILVADLE-----------------------------------------EKGKDHRAQ 141
RH + DL +K D Q
Sbjct: 443 RHEVRKIDLVKRDYSRIIPMLKNVVALDVEVATNRIYWCDLFYRKIYSAYIDKASDTAEQ 502
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
I++ S L+ EG+A DW+ +IYW DS I V +G+ R + ++++PR + +D
Sbjct: 503 VILIDSQLNSPEGVAIDWVHKNIYWTDSGNKTISVATADGSRRRTVFNSDLSEPRAIAVD 562
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ R+++W+DWG+ +IE+ G++G R ++S I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 563 PT--RRFMYWSDWGDKAKIEKAGLNGVGRQVLVSDNIEWPNGITLDLLNQRLYWVDSKLH 620
Query: 261 FIDC 264
+ C
Sbjct: 621 SLSC 624
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 177/449 (39%), Gaps = 83/449 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC---DLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
C++ K CD DCP+ +DE GC E KF S C G +C L
Sbjct: 285 CIHGAKQCDKVHDCPDNSDEA-GCVQESACESPSKFQCKSGEC--IDGGKVCD------L 335
Query: 62 SNDSVTCQD----------MNECE-QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110
D C+D +NEC G CS +C + K Y C C GY L D TC
Sbjct: 336 HRD---CRDWSDEPLKECGINECSLNNGGCSHICKDLKIGYECECPPGYKL-LDKKTCGD 391
Query: 111 INHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL 170
I+ S D + + + D + V Y I+ +
Sbjct: 392 IDECENPDACSQICINYKGDYKCECYEGYEMDTLSKNCKAVGKSPY-----LIFTNRHEV 446
Query: 171 NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS 230
+I++ + + I + K+ + LD T ++W D
Sbjct: 447 RKIDLVKRDYSRIIPMLKNVVA------LDVEVATNRIYWCD------------------ 482
Query: 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN 290
+ KIY +V DS+L+ + V + + +YW D G
Sbjct: 483 -LFYRKIYSAYIDKASDTAEQVILIDSQLNSPE--------GVAIDWVHKNIYWTDSGNK 533
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
+ + A DGS + + L E A+ ++ R+++W+DWG+ +IE
Sbjct: 534 TISV----ATADGSRRRTVFNSDLSEPRAIAVDPTR---------RFMYWSDWGDKAKIE 580
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI--LI 408
+ G++G R ++S I WPNG+TLD+ +R+Y+ DSKL + +++G+ R+ +I +
Sbjct: 581 KAGLNGVGRQVLVSDNIEWPNGITLDLLNQRLYWVDSKLHSLSCIDFNGSNREVLISSID 640
Query: 409 DLMVEFTNDLMGDNGVPALALDLENGMLY 437
DL F + D DLEN ++
Sbjct: 641 DLSHPFGLAVFEDR---VFWTDLENEAIF 666
>gi|198458169|ref|XP_002136192.1| GA27992 [Drosophila pseudoobscura pseudoobscura]
gi|198142446|gb|EDY71195.1| GA27992 [Drosophila pseudoobscura pseudoobscura]
Length = 864
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/333 (33%), Positives = 166/333 (49%), Gaps = 54/333 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGA-LCTCPPGEILSN 63
CV+ VCDG +DCP+G DE C + + C C T G+ C C G ++
Sbjct: 307 CVHQKHVCDGHSDCPSGEDE-LNCPEEQSCFEPKQCEQLCIKTKKGSDECACRLGYLMDK 365
Query: 64 DSVTCQDMNECE--QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+ V C D++EC+ CSQ C NT GS+ICSC GY+L D +CKA+ + L+ +
Sbjct: 366 NKVNCTDIDECQYLTSPVCSQKCQNTLGSFICSCEMGYILRPDLRSCKALGGAMTLLVAN 425
Query: 122 -----------NRHSILVADLEEK--------------------------GKDHRAQDIV 144
NR++ +V L R +D++
Sbjct: 426 RWDIRRVTLSNNRYTAVVKGLHNAIALDFHYRRALMFWSDVSTDVIKMVYMNGTRVRDVI 485
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
GL+ G+A DWI ++W DS R+EV + G R V+A +++ +PR +++ PG
Sbjct: 486 KWGLESPGGIAVDWIHDLLFWTDSGTRRVEVSNFQGNLRTVIASNDLDKPRAIVI--HPG 543
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
FW+DWG NP+IER MDGS R IIS + WPNGL +D R++Y+AD+K I+C
Sbjct: 544 EALAFWSDWGPNPKIERANMDGSQRQVIISNGVTWPNGLAIDYPNRKIYWADAKQHAIEC 603
Query: 265 KSLE-------IKTNVNYS---TIFR-KLYWID 286
+L+ + T++ + TIF +YW D
Sbjct: 604 SNLDGTDRIKILSTHLPHPFALTIFEDTMYWTD 636
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 175/446 (39%), Gaps = 104/446 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT--------- 54
RC+ T +CDG DC + DE C L +C LC + T L +C
Sbjct: 261 RCILRTWLCDGYADCSSAEDE-VDCHL-QCDPGQFLCPTKQNVTNL-KICVHQKHVCDGH 317
Query: 55 --CPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-GSYICSCNEGYVLEYDNHTC--- 108
CP GE D + C + C +P C Q+C TK GS C+C GY+++ + C
Sbjct: 318 SDCPSGE----DELNCPEEQSCFEPKQCEQLCIKTKKGSDECACRLGYLMDKNKVNCTDI 373
Query: 109 -------------KAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLA 155
K N +F+ IL DL R+ + + L+
Sbjct: 374 DECQYLTSPVCSQKCQNTLGSFICSCEMGYILRPDL-------RSCKALGGAMTLLVANR 426
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
+D + R+ + N +V N + LD +FW+D
Sbjct: 427 WD------------IRRVTL-SNNRYTAVVKGLHN-----AIALDFHYRRALMFWSDVST 468
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNY 275
+ I+ + M+G+ +I + P G+ +D
Sbjct: 469 DV-IKMVYMNGTRVRDVIKWGLESPGGIAVDW---------------------------- 499
Query: 276 STIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCT 335
I L+W D G V + +N G+ +++ S L + A+ + G
Sbjct: 500 --IHDLLFWTDSGTRRVEV----SNFQGNLRTVIASNDLDKPRAIVIHPGEAL------- 546
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
FW+DWG NP+IER MDGS R IIS + WPNGL +D R++Y+AD+K I+
Sbjct: 547 --AFWSDWGPNPKIERANMDGSQRQVIISNGVTWPNGLAIDYPNRKIYWADAKQHAIECS 604
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DGT R +++ L F + D
Sbjct: 605 NLDGTDRIKILSTHLPHPFALTIFED 630
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 72/175 (41%), Gaps = 19/175 (10%)
Query: 38 GLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE-----CEQPGYCSQMCTNTKGSYI 92
G CS+ C P C CP G L +D TC+ + + + N +
Sbjct: 690 GGCSHLCLPNQTSRRCGCPIGLSLKDDGKTCKSTADKLVLVARRKDIRLRQLKNNQAELS 749
Query: 93 CSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK--GKDH----RAQDIVVS 146
++ DN + H+ A S+ I D+E K H Q +V S
Sbjct: 750 ---EVDMIVPLDN-----LKHAVALDWCSDTDFIYWTDVERSTINKAHINGSYQQRVVHS 801
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
L GLA DWI +YW D NRIEV NG R +L + + +PR ++++P
Sbjct: 802 NLVSPVGLALDWITDKLYWTDPSTNRIEVATTNGKMRTLLIWEKLYKPRDIVVNP 856
>gi|33879163|gb|AAH21204.1| LRP1 protein [Homo sapiens]
Length = 439
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 164/318 (51%), Gaps = 55/318 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV ++++C+G DC +G+DEGP C + C + C PT G C C L D
Sbjct: 85 CVPMSRLCNGVQDCMDGSDEGPHCRELQGNCSRLGCQHHCVPTLDGPTCYCNSSFQLQAD 144
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLIIS 121
TC+D +EC G CSQ+CTNT GS+IC C EGY+L+ DN +CKA N L+I+
Sbjct: 145 GKTCKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPVDRPPVLLIA 204
Query: 122 NRHSIL------------------------------------VADLEEKGK--------- 136
N +IL V D + +
Sbjct: 205 NSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDSAAQTQLKCARMPGL 264
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
D +I +S L VE +A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 265 KGFVDEHTINISLS-LHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELY 323
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R V
Sbjct: 324 NPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLV 381
Query: 253 YFADSKLDFIDCKSLEIK 270
Y+AD+ LD+I+ E K
Sbjct: 382 YWADAYLDYIEVVDYEGK 399
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 84/145 (57%), Gaps = 13/145 (8%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 294 FYFVDD----IDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAM---------GKVFFT 340
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 341 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 400
Query: 402 RQQVILIDLMVEFTNDLMGDNGVPA 426
RQ +I L+ E ++++ N P
Sbjct: 401 RQTIIQGILVRELLSEVLWGNHDPG 425
>gi|119617396|gb|EAW96990.1| low density lipoprotein-related protein 1 (alpha-2-macroglobulin
receptor), isoform CRA_a [Homo sapiens]
Length = 2641
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 164/318 (51%), Gaps = 55/318 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV ++++C+G DC +G+DEGP C + C + C PT G C C L D
Sbjct: 85 CVPMSRLCNGVQDCMDGSDEGPHCRELQGNCSRLGCQHHCVPTLDGPTCYCNSSFQLQAD 144
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLIIS 121
TC+D +EC G CSQ+CTNT GS+IC C EGY+L+ DN +CKA N L+I+
Sbjct: 145 GKTCKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPVDRPPVLLIA 204
Query: 122 NRHSIL------------------------------------VADLEEKGK--------- 136
N +IL V D + +
Sbjct: 205 NSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDSAAQTQLKCARMPGL 264
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
D +I +S L VE +A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 265 KGFVDEHTINISLS-LHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELY 323
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R V
Sbjct: 324 NPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLV 381
Query: 253 YFADSKLDFIDCKSLEIK 270
Y+AD+ LD+I+ E K
Sbjct: 382 YWADAYLDYIEVVDYEGK 399
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 155/304 (50%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1159 CLPPDKLCDGNDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1216
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1217 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1276
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1277 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1336
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1337 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1396
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R T+ + WPNGLT+D +R+ + D++
Sbjct: 1397 RDGI--LFWTDWDASLPRIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDAR 1454
Query: 259 LDFI 262
D I
Sbjct: 1455 SDAI 1458
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 47/237 (19%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1855 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1911
Query: 137 ----------------DHRAQ-------------------------DIVVSGLDLVEGLA 155
D A+ D+V +G+ VEG+A
Sbjct: 1912 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1971
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1972 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2029
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 2030 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEN 2086
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 485 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 543
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 544 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 603
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 604 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 661
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 662 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 721
Query: 261 FID 263
I+
Sbjct: 722 RIE 724
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 75/125 (60%), Gaps = 13/125 (10%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 294 FYFVDD----IDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAMGK---------VFFT 340
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 341 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 400
Query: 402 RQQVI 406
RQ +I
Sbjct: 401 RQTII 405
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 141/362 (38%), Gaps = 66/362 (18%)
Query: 72 NECEQ---PGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL 127
N CE G CS +C N + C+C L DN TC FL+ + + I
Sbjct: 1538 NPCEANGGQGPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYEFK---KFLLYARQMEIR 1594
Query: 128 VADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
DL+ ++ V +D V L YD +YW D R I+ NGT +
Sbjct: 1595 GVDLDAPYYNYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVV 1653
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLD 246
++ G+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1654 SADLPNAHGLAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV- 1709
Query: 247 IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
+ KLYW D G N I ANMDGSN
Sbjct: 1710 -----------------------------HPLRGKLYWTD-GDN-----ISMANMDGSNR 1734
Query: 307 SILVSGQLYE-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
++L SGQ LA+D LY W G N I R +DGS I +
Sbjct: 1735 TLLFSGQKGPVGLAIDFPESKLY-----------WISSG-NHTINRCNLDGSGLEVIDAM 1782
Query: 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCN-YDGTG----RQQVILIDLMVEFTNDLMG 420
+ L I ++++AD + + C+ DG+G R L+ M + +
Sbjct: 1783 RSQLGKATALAIMGDKLWWADQVSEKMGTCSKADGSGSVVLRNSTTLVMHMKVYDESIQL 1842
Query: 421 DN 422
D+
Sbjct: 1843 DH 1844
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2341 ECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2400
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2401 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2431
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 2260 IHFGNIQQINDDGSRRITIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGA 2319
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2320 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIR 2377
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2378 TPNGLAIDHRAEKLYFSDATLDKIE 2402
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2381 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 2436
Query: 213 W 213
W
Sbjct: 2437 W 2437
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1278 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1327
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1328 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1378
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1379 ---TTLLAGDIEHPRAIALDPRDGILFWT 1404
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 19/122 (15%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 679 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 738
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIERIGMDG---------SNRSTIISTK 236
+ G+ + +LFWT++ G R+ER G+ G S R I +
Sbjct: 739 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLER-GVGGAPPTVTLLRSERPPIFEIR 793
Query: 237 IY 238
+Y
Sbjct: 794 MY 795
>gi|242018517|ref|XP_002429721.1| low-density lipoprotein receptor, putative [Pediculus humanus
corporis]
gi|212514727|gb|EEB16983.1| low-density lipoprotein receptor, putative [Pediculus humanus
corporis]
Length = 4603
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 154/307 (50%), Gaps = 51/307 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C+ ++++CD K DC +G+DEG C+ C CS+ C P G +C CP G L
Sbjct: 1009 KCIKVSQLCDNKKDCSDGSDEGLRCEEQLCSFT-SHCSHYCQNAPNGFVCYCPKGLHLQP 1067
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
DS TC + + CE G CSQ C K + C C + ++L+ D TCK+ + + +I SNR
Sbjct: 1068 DSTTCSESHPCESWGVCSQYCIPLKNKHKCKCEDDHLLQPDGFTCKSKDGAIPQVIFSNR 1127
Query: 124 HSI------------LVADLEEK-------------------------------GKDHRA 140
H + L++ L+ G
Sbjct: 1128 HELRGVELRNFTVKALISSLKNTIALDFYHTKAADMIYWTDVVDDKIYRGTLIGGSLTNI 1187
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ +V +GL EGLA DWIG ++YW++S L++IEV NG+ R L ++ PR + LD
Sbjct: 1188 EVVVQTGLATAEGLAVDWIGENLYWVESNLDQIEVAKLNGSFRKTLIAGDMDSPRAIALD 1247
Query: 201 PSPGTRWLFWTDW-GENPRIERIGMDGSNRSTIIS----TKIYWPNGLTLDIATRRVYFA 255
P G +LFW+DW PRIER M G+NR ++ T WPNGLTLD RR+Y+
Sbjct: 1248 PRDG--YLFWSDWDAHAPRIERCSMSGTNRKRVLRVDQITDGAWPNGLTLDYVLRRIYWI 1305
Query: 256 DSKLDFI 262
D++ D I
Sbjct: 1306 DARSDSI 1312
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 156/307 (50%), Gaps = 44/307 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EILSN 63
CV +C+G+ DC + +DE C++ EC CS+ C +G C C G ++ N
Sbjct: 2810 CVEEYLLCNGQDDCGDFSDE-IKCNINECHQDPPPCSHICIDKKVGFECKCKEGFKVNEN 2868
Query: 64 DSVTCQDMNECEQPGY-CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D+ C+D+NECE P CSQ C NT GS++CSC+ GY L+ D +CK + LI +N
Sbjct: 2869 DTSLCRDINECELPEKPCSQFCRNTLGSFVCSCDVGYALKADGRSCKVNSTIEPKLIFTN 2928
Query: 123 RH--------------------------------------SILVADLEEKGKDHRAQDIV 144
H ++L + ++ D+ + I+
Sbjct: 2929 FHYIREINFNGHAALLANNLTNAVALDYDWLEHCIYWSDVTVLGSSIKRFCSDNSSYQIL 2988
Query: 145 VSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
S L +GLA DW+G ++YW D L+ IEV +G R VL N+ +PR + L+PS
Sbjct: 2989 HSASLQNPDGLAVDWVGRNLYWCDKVLDTIEVSKLDGRYRRVLINKNLQEPRAITLNPSE 3048
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G ++WTDWG+ P I + MDG+N +++ + WPN LT+ T+ +++ D++ D+I
Sbjct: 3049 GA--MYWTDWGDKPFIGKANMDGTNFRYLVNESLGWPNALTISYETKELFYGDARQDYIA 3106
Query: 264 CKSLEIK 270
LE K
Sbjct: 3107 MCDLEGK 3113
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 175/422 (41%), Gaps = 88/422 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+N + +C+G+ DC + +DE +LAEC +K +C+ H +C +L N
Sbjct: 2766 CINKSLICNGENDCIDNSDE----ELAECANKTFVCNPETHFECRNKICV--EEYLLCNG 2819
Query: 65 SVTCQD--------MNECEQ-PGYCSQMCTNTKGSYICSCNEGY-VLEYDNHTCKAINHS 114
C D +NEC Q P CS +C + K + C C EG+ V E D C+ IN
Sbjct: 2820 QDDCGDFSDEIKCNINECHQDPPPCSHICIDKKVGFECKCKEGFKVNENDTSLCRDINE- 2878
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIV---VSGLDLVEGLAYDWIGGHI-YWLDSRL 170
+L EK ++ + V D+ L D + ++ +L
Sbjct: 2879 --------------CELPEKPCSQFCRNTLGSFVCSCDVGYALKADGRSCKVNSTIEPKL 2924
Query: 171 ---NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDG 226
N + + N L +N+T + LD ++W+D I+R D
Sbjct: 2925 IFTNFHYIREINFNGHAALLANNLTN--AVALDYDWLEHCIYWSDVTVLGSSIKRFCSDN 2982
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWID 286
S+ + S + P+GL +D R +Y+ D LD I+ L
Sbjct: 2983 SSYQILHSASLQNPDGLAVDWVGRNLYWCDKVLDTIEVSKL------------------- 3023
Query: 287 EGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWG 344
DG +L++ L E A+ L+ G +Y WTDWG
Sbjct: 3024 ---------------DGRYRRVLINKNLQEPRAITLNPSEGAMY-----------WTDWG 3057
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
+ P I + MDG+N +++ + WPN LT+ T+ +++ D++ D+I C+ +G R+
Sbjct: 3058 DKPFIGKANMDGTNFRYLVNESLGWPNALTISYETKELFYGDARQDYIAMCDLEGKNRRI 3117
Query: 405 VI 406
++
Sbjct: 3118 IL 3119
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 92/162 (56%), Gaps = 16/162 (9%)
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
R + + +G D V GLA DWI +IYW D +LN IEV NG+NR V+ D I++P G+
Sbjct: 1826 RYETMENTGSDFVTGLAIDWIAENIYWTDPKLNVIEVSRLNGSNRFVVISDGISKPGGIA 1885
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII---STKIYWPNGLTLDIATRRVYFA 255
+DP G LFW G++PRIE +DGSNR ++ S I N + LD+ T+ +Y+
Sbjct: 1886 VDPVVGK--LFWAVNGKSPRIECSALDGSNRMVLVNDTSGSISTINDIALDLETKHLYWC 1943
Query: 256 DSKLDFIDC-------KSLEIKTNVNYSTIF----RKLYWID 286
DS LD I+ ++L + +++ F + LYWID
Sbjct: 1944 DSALDKIERVKYDGSERTLLLDHSLDNPQAFTVYNKHLYWID 1985
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 118/270 (43%), Gaps = 50/270 (18%)
Query: 40 CSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSC---- 95
C C +P G C C G N+S C D++ECE G C Q+C NT+GS+ CSC
Sbjct: 3 CPYKCTMSPSGPQCYCEKGLKYVNNS--CIDLDECEIEGSCDQICRNTQGSFSCSCVNGY 60
Query: 96 ---------------------------------NEGYVLEYDNHTCKAI-------NHSA 115
N +V + N + + N S
Sbjct: 61 TERGVRCFAQNVPPEEPPSLLYSSSSDIGLIYLNGSFVSKSTNLNVQTLSLDFDHRNRSV 120
Query: 116 AFLII-SNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
++ S S L+ K ++ L L DW+ G+ Y+LD I
Sbjct: 121 CYVRRNSTNPSFKCVSLDNFEKSWDLPKSIMFPLHSKTHLVLDWLTGNWYFLDDSREMIF 180
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRI-ERIGMDGSNRSTII 233
+C+ + ++ ++++P+G+ LDP+ G +LF+T W ++ + ER +DG+ R ++
Sbjct: 181 LCNSTLKSCTIICDSDLSRPKGITLDPTKG--FLFFTKWSDDAAVLERALLDGTQRLVLV 238
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFID 263
KI +P GLT+D + +Y+ D+ LD I+
Sbjct: 239 DKKIVYPYGLTVDFPSEHIYWVDTYLDVIE 268
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 25/188 (13%)
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEV 175
++ S+ HSI E + + +++VVS GL VEG+A+D++G +IYW D I+V
Sbjct: 442 YIYFSDTHSI-----ERQHINGSKREVVVSKGLIYVEGIAFDYLGHNIYWADEGSAVIKV 496
Query: 176 CD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW----GENPRIERIGMDGSNRS 230
N T + N+ QPR + +D R L+W DW + +IER ++G R
Sbjct: 497 AKVSNSTIVKTIVSGNLFQPRSLAIDHK--HRNLYWADWTPMVHKIGKIERALLNGDERE 554
Query: 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL----------EIKTNVNYSTIFR 280
IS WP+GLT D +Y+ D+ L+ I+ +L ++KT+ Y +
Sbjct: 555 VFISENTLWPSGLTFDFTNDVLYWCDAFLEVIERINLDRTGRRKIFSDLKTDHPYGLAYH 614
Query: 281 K--LYWID 286
LYW +
Sbjct: 615 NNFLYWTE 622
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 102/503 (20%), Positives = 186/503 (36%), Gaps = 146/503 (29%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCS---------------------NT 43
C++ +CDG+ DC + +DE LAE G+C N
Sbjct: 3601 CISKNYLCDGRDDCGDNSDENKEFCLAE-----GICPADQFRCGNGDCISLKLRCDGFND 3655
Query: 44 CHPTPLGALCTCPPGEILSNDSVTCQDMNECEQP---GYCSQMCTNTKGSYICSCNEGYV 100
C C + + ++ C D+N+ + G CSQ C K SY C C +GY
Sbjct: 3656 CGDNSDEGNCQFYTSKRCALENKNCSDLNQKKHYCSFGSCSQKCIEKKNSYSCQCEKGYT 3715
Query: 101 LEYD------------------------------------------NHTCKAINHSAAFL 118
L ++ + +CKA+ A +
Sbjct: 3716 LTFEETSTSKMKEGTKEKSKNYKPGSSDKKDSRGLESEKKGEFSDVHKSCKAMGSEAGLI 3775
Query: 119 IISNRHSILVADLEEKGKDHRAQDIVVSGLDLVE-GLAYDWIGGHIYWLDSRLNRIEVCD 177
+I + +++ + +G + R ++ + L + + Y+ +++ D I
Sbjct: 3776 VIRDTDMAVLSPYKSRGSE-RQLNLAKTNLKIKNVDVLYNDSQITVFFTDYVKKTIM--- 3831
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
R++++KD++ R SP T NP + + + I K
Sbjct: 3832 -----RMIVSKDDLNNSRLKREIVSPSES----TPLPPNPSCDLENILLKQNADIFGMK- 3881
Query: 238 YWPNGLTLDIATRRVYFADSK----LDFIDCKSLEIKTNVNYST---------------- 277
+ADSK DFI+ ++L KT +Y
Sbjct: 3882 ----------------YADSKREINYDFIEAENLAFKTQYDYKMKKQLRFKRDSDTLKLV 3925
Query: 278 --------------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
+ +LY+ID+ N + + ++G + ++ L E + L LE
Sbjct: 3926 VGELHDPKGLAIDWVVGRLYYIDKIPNEKSAFLMASTLNGRKKTTIIKTNLIEPMDLALE 3985
Query: 324 NGMLYYSTLKCTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
M LF+TD + P+IER MDGS+R ++S + P+G+++D + +
Sbjct: 3986 PKMAL---------LFFTDCNLKFPKIERSFMDGSHRKLVVSKDVVCPSGISIDYPSSVL 4036
Query: 383 YFADSKLDFIDFCNYDGTGRQQV 405
YF D+KL+ ++ +++G R V
Sbjct: 4037 YFVDTKLNTLESVDFNGDNRMVV 4059
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 49/226 (21%)
Query: 240 PNGLTLDIATRRVYFAD-----------SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
PN + D+ +YF+D SK + + K L + + + +YW DEG
Sbjct: 431 PNSIDFDVKNEYIYFSDTHSIERQHINGSKREVVVSKGLIYVEGIAFDYLGHNIYWADEG 490
Query: 289 GNGVPLKIGKANMDGSNASI---LVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDW-- 343
+K+ K SN++I +VSG L++ +L +++ R L+W DW
Sbjct: 491 S--AVIKVAKV----SNSTIVKTIVSGNLFQPRSLAIDHKH---------RNLYWADWTP 535
Query: 344 --GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
+ +IER ++G R IS WP+GLT D +Y+ D+ L+ I+ N D TG
Sbjct: 536 MVHKIGKIERALLNGDEREVFISENTLWPSGLTFDFTNDVLYWCDAFLEVIERINLDRTG 595
Query: 402 RQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
R+++ +DL D+ L N LY++ EF K
Sbjct: 596 RRKIF---------SDLKTDH---PYGLAYHNNFLYWT----EFQK 625
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 136/337 (40%), Gaps = 97/337 (28%)
Query: 80 CSQMCTN-TKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISNRHSILVADLEEKGKD 137
C +C +K +C C GY ++ +N T CK I F+I S
Sbjct: 1719 CQHLCLPISKTERVCKCATGYFVDVNNPTKCKGIEE---FIIYS---------------- 1759
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+ V GL L G Y + G + +R+ +A + G
Sbjct: 1760 ---INWEVKGLALPPGDNYTKVLGPL------------------SRVSMATN-----LGF 1793
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+ D +FW D + +I +I DG+NR T+I R ++
Sbjct: 1794 LYD----KELIFWGD-SDQGKITKIKRDGTNRETVIE---------------RYETMENT 1833
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE- 316
DF+ T + I +YW D N + + + ++GSN +++S + +
Sbjct: 1834 GSDFV--------TGLAIDWIAENIYWTDPKLNVIEV----SRLNGSNRFVVISDGISKP 1881
Query: 317 -ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII---STKIYWPNG 372
+A+D G L FW G++PRIE +DGSNR ++ S I N
Sbjct: 1882 GGIAVDPVVGKL-----------FWAVNGKSPRIECSALDGSNRMVLVNDTSGSISTIND 1930
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
+ LD+ T+ +Y+ DS LD I+ YDG+ R +L+D
Sbjct: 1931 IALDLETKHLYWCDSALDKIERVKYDGSER--TLLLD 1965
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 74/135 (54%), Gaps = 24/135 (17%)
Query: 151 VEGLAYDWIGGHIYWL------DSRLN------RIEVCDENGT--NRIVLAKDNIT---- 192
VEGL+Y+ G +YW SR+N IE + N T ++I L+K I
Sbjct: 2150 VEGLSYESYGQTLYWTCNNEATISRMNLSQLIPHIEPYNSNTTKSSKIELSKVEIVVNLE 2209
Query: 193 ---QPRGMMLDPSPGTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248
+PRG++ D S +R +FWT+W + P I+R ++G +II T I PN +TLD
Sbjct: 2210 KEDKPRGIVTD-SCNSR-IFWTNWNHQAPSIQRSFLNGYMVQSIIKTNIRMPNAITLDFM 2267
Query: 249 TRRVYFADSKLDFID 263
++Y++D++LD I+
Sbjct: 2268 AMKLYWSDARLDKIE 2282
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWG-ENPRIERIGM 354
I N + + +S + ++ + L+ E+ T C +FWT+W + P I+R +
Sbjct: 2184 IEPYNSNTTKSSKIELSKVEIVVNLEKEDKPRGIVTDSCNSRIFWTNWNHQAPSIQRSFL 2243
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
+G +II T I PN +TLD ++Y++D++LD I+ C DGT R
Sbjct: 2244 NGYMVQSIIKTNIRMPNAITLDFMAMKLYWSDARLDKIERCETDGTNR 2291
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 9/91 (9%)
Query: 337 WLFWTDWGENPRI-ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+LF+T W ++ + ER +DG+ R ++ KI +P GLT+D + +Y+ D+ LD I+
Sbjct: 211 FLFFTKWSDDAAVLERALLDGTQRLVLVDKKIVYPYGLTVDFPSEHIYWVDTYLDVIERI 270
Query: 396 NYDGTGRQQVI-------LIDLMVEFTNDLM 419
+YDG R+ + L D+ V F NDL
Sbjct: 271 DYDGKNRKVIRKGVPVQNLYDITV-FENDLF 300
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+ Q I+ + + + + D++ +YW D+RL++IE C+ +GTNR+VL+ + P M
Sbjct: 2246 YMVQSIIKTNIRMPNAITLDFMAMKLYWSDARLDKIERCETDGTNRVVLSNTSPQHPFDM 2305
Query: 198 MLDPSPGTRWLFWTDW 213
+ + +LFWTDW
Sbjct: 2306 AVHGN----YLFWTDW 2317
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 117/321 (36%), Gaps = 72/321 (22%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N +Y C C L DN TC +N ++ S + I DL
Sbjct: 1402 GGCSHLCLININNTYTCDCPHVMRLSSDNKTCIVVNER--IVLFSRANEIRGVDLTS-AY 1458
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-------------------------- 170
H I V + +D IYW D ++
Sbjct: 1459 YHTIPTINVPHAITPATIDFDAANKKIYWADVQMNEVKTSNLIGGPAETIIDSGIEHPNG 1518
Query: 171 -------------------NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
N I VC+ G ++ N+ Q R + L+P GT L+W+
Sbjct: 1519 LAIDWISGNLFVTSSGAGENHISVCNLKGEFITIINGSNLFQVRSLSLNPVNGT--LYWS 1576
Query: 212 DWGENPR-IERIGMDGSNRSTIISTK----IYWPNGLTLDIATRRVYFADSK------LD 260
+ IE+ MDG +R ++S + ++ P L D+AT R+Y+ + + D
Sbjct: 1577 SVKNDLHIIEQSRMDGFDRVILVSQRDQPSLHSPQSLVFDLATDRLYWVNIESSSIQYYD 1636
Query: 261 FID--CKSLEIKTNVNYST----IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
F++ K L ++ N T F +Y+ D+ I KA+M ++
Sbjct: 1637 FVNNSVKLLILRGNAARPTSVVPYFGSIYYSDQEDQA----IHKADMTTGGNDTVLRNNT 1692
Query: 315 YEALALDLENGMLYYSTLKCT 335
L++ + + L T CT
Sbjct: 1693 GNILSIRIYDPKLQTGTNACT 1713
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 119/313 (38%), Gaps = 52/313 (16%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENG--TNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
GL D++ IYW+D+R + I +G ++ + ++ P + + +++W
Sbjct: 1292 GLTLDYVLRRIYWIDARSDSIHTTTYDGLMHKEVIRGHETLSHPFAIAI----FENYVYW 1347
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
TDW N I +GS+ I T LT + ++ + D E K
Sbjct: 1348 TDWRSNSVIRANKWNGSDLHIIQRT-------LTQPFDIQILHPSRQPRDVNRPSPCE-K 1399
Query: 271 TNVNYSTI----FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGM 326
N S + Y D + + L N I++ + E +DL +
Sbjct: 1400 NNGGCSHLCLININNTYTCD-CPHVMRLSSDNKTCIVVNERIVLFSRANEIRGVDLTSA- 1457
Query: 327 LYYSTL-----------------KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYW 369
YY T+ + ++W D N ++ + G TII + I
Sbjct: 1458 -YYHTIPTINVPHAITPATIDFDAANKKIYWADVQMN-EVKTSNLIGGPAETIIDSGIEH 1515
Query: 370 PNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN--GVPAL 427
PNGL +D + ++ S G G + + +L EF + G N V +L
Sbjct: 1516 PNGLAIDWISGNLFVTSS-----------GAGENHISVCNLKGEFITIINGSNLFQVRSL 1564
Query: 428 ALDLENGMLYYST 440
+L+ NG LY+S+
Sbjct: 1565 SLNPVNGTLYWSS 1577
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 115/304 (37%), Gaps = 61/304 (20%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD---LEEK 134
G C+++C +C C G V + D C+ N + + SI ++D L
Sbjct: 2037 GGCAELCLFNGTHPVCKCAHGQVAK-DQKNCEDYNSFIMYSRVIRIDSIHISDKNNLNAP 2095
Query: 135 GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
+ ++++ + + GL+YD+ +++ D + I NGTN VL D
Sbjct: 2096 FPSIQNKELMRNAI----GLSYDYQRSLLFYSDIQRGSINAVYFNGTNHTVLI-DRQGSV 2150
Query: 195 RGMMLDPSPGTRWLFWTDWGEN-----------PRIERIGMDGSNRSTIISTKIYW---- 239
G+ + T L+WT E P IE + + S I +K+
Sbjct: 2151 EGLSYESYGQT--LYWTCNNEATISRMNLSQLIPHIEPYNSNTTKSSKIELSKVEIVVNL 2208
Query: 240 -----PNGLTLDIATRRVYFAD-------SKLDFIDCKSLE--IKTNVNYST------IF 279
P G+ D R+++ + + F++ ++ IKTN+ +
Sbjct: 2209 EKEDKPRGIVTDSCNSRIFWTNWNHQAPSIQRSFLNGYMVQSIIKTNIRMPNAITLDFMA 2268
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLF 339
KLYW D + KI + DG+N +L + + + +LF
Sbjct: 2269 MKLYWSDARLD----KIERCETDGTNRVVLSNTSPQHPFDMAVHGN-----------YLF 2313
Query: 340 WTDW 343
WTDW
Sbjct: 2314 WTDW 2317
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSN 42
RC+ + CDG DCPNG DE P C C+ + C+N
Sbjct: 3407 RCIPSSWNCDGDADCPNGEDEPPECAHHSCEPSYFKCAN 3445
>gi|440889696|gb|ELR44681.1| Low-density lipoprotein receptor-related protein 8, partial [Bos
grunniens mutus]
Length = 961
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/297 (35%), Positives = 149/297 (50%), Gaps = 46/297 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV+ KVCD + DC + + P L EC H G CS+ C +G CTCP G L D
Sbjct: 306 CVDGRKVCDAQRDCRDWS-PCPSLGLNECLHNNGGCSHICTDLKIGFECTCPAGYQLL-D 363
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
TC D++ECE P CSQ+C N KG + C C+ GY ++ CKA+ + LI +NRH
Sbjct: 364 QKTCGDIDECEDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAVAGRSPSLIFTNRH 423
Query: 125 SILVADL-----------------------------------------EEKGKDHRAQDI 143
+ DL +K + QD+
Sbjct: 424 EVRRIDLVKRDYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASNPVEQDV 483
Query: 144 VV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ L EGLA DW+ HIYW DS I V +G R L N+++PR + +DP
Sbjct: 484 LIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGKRRCTLFSRNLSEPRAIAVDPL 543
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
R+++W+DWG +IE+ G++G R T++S I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 544 --QRFMYWSDWGFQAKIEKSGLNGVGRQTLVSDGIEWPNGITLDLLNQRLYWVDSKL 598
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 171/422 (40%), Gaps = 91/422 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT---CPPGEIL 61
CV K C+ + DCP+G+DE GC L +TC P C C G +
Sbjct: 265 CVPAIKRCNQEQDCPDGSDET-GC----------LQESTCE-GPRRFQCKSGECVDGRKV 312
Query: 62 SNDSVTCQD--------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN 112
+ C+D +NEC G CS +CT+ K + C+C GY L D TC I+
Sbjct: 313 CDAQRDCRDWSPCPSLGLNECLHNNGGCSHICTDLKIGFECTCPAGYQL-LDQKTCGDID 371
Query: 113 H----SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS 168
A I N + + D + V G + I + +
Sbjct: 372 ECEDPDACSQICVNYKGYFKCECHPGYE----MDTLTKNCKAVAGRSPSLIFTNRH---- 423
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ RI++ + + I + K+ + LD T ++W D +I MD ++
Sbjct: 424 EVRRIDLVKRDYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKAS 476
Query: 229 ----RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYW 284
+ +I +++ P GL +D + + +YW
Sbjct: 477 NPVEQDVLIDEQLHSPEGLAVDW------------------------------VHKHIYW 506
Query: 285 IDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWG 344
D G I A +DG L S L E A+ ++ R+++W+DWG
Sbjct: 507 TDSGNK----TISVATVDGKRRCTLFSRNLSEPRAIAVD---------PLQRFMYWSDWG 553
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
+IE+ G++G R T++S I WPNG+TLD+ +R+Y+ DSKL + ++ G R+
Sbjct: 554 FQAKIEKSGLNGVGRQTLVSDGIEWPNGITLDLLNQRLYWVDSKLHQLSSIDFSGGNRKM 613
Query: 405 VI 406
+I
Sbjct: 614 LI 615
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL--AKDNITQPRGMM 198
Q +V G++ G+ D + +YW+DS+L+++ D +G NR +L + D ++ P G+
Sbjct: 569 QTLVSDGIEWPNGITLDLLNQRLYWVDSKLHQLSSIDFSGGNRKMLISSPDFLSHPFGIA 628
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 629 VFEDK----VFWTD 638
>gi|297668563|ref|XP_002812504.1| PREDICTED: low-density lipoprotein receptor-related protein
1B-like, partial [Pongo abelii]
Length = 722
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 184/420 (43%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+GK DCP+G+DEG CD EC G CSN C P G +C+CP G L+
Sbjct: 226 CLQPEKLCNGKKDCPDGSDEGDLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLNK 283
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC EG+ L+ D +C +++ AF+I S R
Sbjct: 284 DNKTCEIVDYCSNHLKCSQVCEQHKHTVKCSCYEGWKLDVDGESCTSVDPFEAFIIFSIR 343
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 344 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAIE 403
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 404 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDP 463
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 464 RYGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAR 521
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG+N ++ G Y +
Sbjct: 522 SDAI------------YSALY----------------------DGTNMIEIIRGHEYLSH 547
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 548 PFAVS---LYGSE------VYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYHPS 598
>gi|47229537|emb|CAG06733.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2303
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 133/403 (33%), Positives = 192/403 (47%), Gaps = 68/403 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CVN T +CD K DC +G+DE C + EC K CS C +G C C PG L +
Sbjct: 686 CVNETLLCDRKDDCGDGSDE-LNCFINECLNSKLSGCSQLCEDLKIGFKCRCHPGFRLKD 744
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D TC D++EC C+Q C NT GS+ C C EGY L +N T CK+ + FLI +N
Sbjct: 745 DRKTCIDIDECTTTYPCTQRCINTHGSFHCLCVEGYHLSPENPTICKSTSDEEPFLIFAN 804
Query: 123 RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
R+ + +L+ G ++ V L G+A RL + V + N
Sbjct: 805 RYYLRKLNLD--GSNYTLLKQVRLAFTLFSGVALK--DTRRVCCGPRLTELHVLQQGLNN 860
Query: 183 RIVLAKDNITQPRGMMLDPSPGTRWLFWTD-WGENPRIERIGMDGSNRSTIISTKIYWPN 241
+ L D Q ++WTD + I R+ ++GS+ + T + P+
Sbjct: 861 AVALDFDYRQQ-------------MIYWTDVTTQGSMIRRMYINGSDVQVLHRTSLSNPD 907
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
GL +D + LYW D+G + + + + +
Sbjct: 908 GLAVDW------------------------------VGGNLYWCDKGRDTIEV----SKL 933
Query: 302 DGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNR 359
+G+ ++LV+ L E A+A+D+ G LY W+DWG+NP I RIGMDG+NR
Sbjct: 934 NGAYRTVLVNSGLREPRAVAVDVRYGYLY-----------WSDWGDNPHIGRIGMDGTNR 982
Query: 360 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
S II KI WPNGLTLD R+Y+AD++ D+I F + DGT R
Sbjct: 983 SIIIEEKITWPNGLTLDFVNDRIYWADAREDYIAFASLDGTRR 1025
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 80/144 (55%), Gaps = 8/144 (5%)
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNITQPRGMMLDPS 202
++ L + G+A DW+ G++YW DS + IEV + T+ R L I +P +++DP
Sbjct: 1754 MIPDLKMPRGIAVDWVAGNLYWTDSGRDVIEVAQISKTHHRKTLISGMIDEPYAIVVDPQ 1813
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G ++W DWG +P+IE MDG+ R T++ I WP GL +D R+Y+AD+KL I
Sbjct: 1814 RGR--MYWADWGNHPKIETAAMDGTMRETLVEKNIQWPTGLAVDYFNERLYWADAKLSLI 1871
Query: 263 DCKSLEIKTNVNYSTIFRKLYWID 286
++ N + R+ + ID
Sbjct: 1872 ----CSVRLN-GSDAVLRQPFSID 1890
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 123/524 (23%), Positives = 192/524 (36%), Gaps = 180/524 (34%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSN---------------TCH--- 45
+C+ VCD DC +G+DE C+ C K C+N CH
Sbjct: 599 QCIPKHFVCDHDNDCGDGSDESQECEYPTCGPKEFRCANGRCLIQSSWECDGDFDCHDQS 658
Query: 46 -PTPLGALCTCPPGE-----------------ILSNDSVTCQD--------MNEC--EQP 77
PL C P + +L + C D +NEC +
Sbjct: 659 DEAPLNPRCGGPANKCNNTAYACSNGNCVNETLLCDRKDDCGDGSDELNCFINECLNSKL 718
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHT------------------------------ 107
CSQ+C + K + C C+ G+ L+ D T
Sbjct: 719 SGCSQLCEDLKIGFKCRCHPGFRLKDDRKTCIDIDECTTTYPCTQRCINTHGSFHCLCVE 778
Query: 108 -----------CKAINHSAAFLIISNRHSILVADLEEKG-------------------KD 137
CK+ + FLI +NR+ + +L+ KD
Sbjct: 779 GYHLSPENPTICKSTSDEEPFLIFANRYYLRKLNLDGSNYTLLKQVRLAFTLFSGVALKD 838
Query: 138 HR---------AQDIVVSGLDLVEGLAYDWIGGHIYWLD-----SRLNRIEVCDENGTNR 183
R ++ GL+ L +D+ IYW D S + R+ + NG++
Sbjct: 839 TRRVCCGPRLTELHVLQQGLNNAVALDFDYRQQMIYWTDVTTQGSMIRRMYI---NGSDV 895
Query: 184 IVLAKDNITQPRGMMLD-----------------------------PSPGTR-------- 206
VL + +++ P G+ +D + G R
Sbjct: 896 QVLHRTSLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVNSGLREPRAVAVD 955
Query: 207 ----WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+L+W+DWG+NP I RIGMDG+NRS II KI WPNGLTLD R+Y+AD++ D+I
Sbjct: 956 VRYGYLYWSDWGDNPHIGRIGMDGTNRSIIIEEKITWPNGLTLDFVNDRIYWADAREDYI 1015
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
SL+ R + LK + + + + V + L D+
Sbjct: 1016 AFASLD--------GTRRHTSKTHTHTHTFELKNDRYSNVAPDCCLWVRCTV---LVKDI 1064
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD-GSNRSTIIST 365
+ + S + +++WTDW E I R G+N++ +IST
Sbjct: 1065 PH-IFAMSLFE--EYIYWTDW-ETKSINRAHKTLGTNKTVLIST 1104
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 20/153 (13%)
Query: 267 LEIKTNVNYSTIFRKLYWIDEGGNGVPL-KIGKANMDGSNASILVSGQLYE--ALALDLE 323
L++ + + LYW D G + + + +I K + + L+SG + E A+ +D +
Sbjct: 1758 LKMPRGIAVDWVAGNLYWTDSGRDVIEVAQISKTH----HRKTLISGMIDEPYAIVVDPQ 1813
Query: 324 NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 383
G +Y W DWG +P+IE MDG+ R T++ I WP GL +D R+Y
Sbjct: 1814 RGRMY-----------WADWGNHPKIETAAMDGTMRETLVEKNIQWPTGLAVDYFNERLY 1862
Query: 384 FADSKLDFIDFCNYDGTGR--QQVILIDLMVEF 414
+AD+KL I +G+ +Q ID+ ++
Sbjct: 1863 WADAKLSLICSVRLNGSDAVLRQPFSIDVFEDY 1895
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + GSN II + I PNGL +D ++YF+D+ LD
Sbjct: 85 ECQSLMFWTNWNEQSPSIMRATLTGSNVIVIIGSDIRTPNGLAIDHRAEKLYFSDATLDK 144
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
I+ C YDGT R V+ + + F + GD
Sbjct: 145 IERCEYDGTRRYVVLKNEPVHPFGLAVYGD 174
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 146 SGLDLVEGLAYDWIGGHIYWLD---SRLNRIEVCDENG----TNRIVLAKDNITQPRGMM 198
S + VEGLAY +YW S + R V D++ V+ PR +
Sbjct: 24 SDVGSVEGLAYHRGWDMLYWTSYTTSTITRHTV-DQSRWGAVDRHTVVTMSGEDHPRAFV 82
Query: 199 LDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LD +FWT+W E +P I R + GSN II + I PNGL +D ++YF+D+
Sbjct: 83 LDEC--QSLMFWTNWNEQSPSIMRATLTGSNVIVIIGSDIRTPNGLAIDHRAEKLYFSDA 140
Query: 258 KLDFID 263
LD I+
Sbjct: 141 TLDKIE 146
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 143 IVVSGLDL--VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
IV+ G D+ GLA D +Y+ D+ L++IE C+ +GT R V+ K+ P G+ +
Sbjct: 113 IVIIGSDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGTRRYVVLKNEPVHPFGLAV- 171
Query: 201 PSPGTRWLFWTDW 213
++FWTDW
Sbjct: 172 ---YGDYIFWTDW 181
>gi|291398862|ref|XP_002715661.1| PREDICTED: low density lipoprotein receptor-related protein 8
[Oryctolagus cuniculus]
Length = 1042
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 164/321 (51%), Gaps = 54/321 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CV+ KVCD + DC + +DE C L EC+H G CS+ C +G C+CP G L
Sbjct: 390 CVDSGKVCDAQRDCRDWSDELLKECGLNECQHNNGGCSHICTDRRIGFECSCPAGFRLL- 448
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D TC D++ECE P CSQ+C N KG + C C+ GY ++ + CKA + LI +NR
Sbjct: 449 DQKTCGDIDECEDPDACSQICVNYKGYFKCECHPGYEMDTLSKNCKAAAGKSPSLIFTNR 508
Query: 124 HSILVADL-----------------------------------------EEKGKDHRAQD 142
H + DL +K D Q+
Sbjct: 509 HEVRKIDLVRREHSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPAEQE 568
Query: 143 IVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+++ L EGLA DW+ H+YW DS I V +G R L ++++PR + +DP
Sbjct: 569 VLIDEQLHSPEGLAVDWVHKHMYWTDSGNKTISVATVDGGRRCTLFSRDLSEPRAIAVDP 628
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++W+DWG +IE+ G++G++R T++S I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 629 LRG--FMYWSDWGFQAKIEKSGLNGADRQTLVSDNIEWPNGITLDLLNQRLYWVDSKLHQ 686
Query: 262 IDCKSLEIKTNVNYSTIFRKL 282
+ +++++S RK+
Sbjct: 687 L--------SSIDFSGGNRKM 699
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 174/428 (40%), Gaps = 101/428 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV TK CD + DC +G+DE GC L +TC P CT GE + +
Sbjct: 349 CVLATKRCDQEQDCRDGSDEA-GC----------LQESTCE-GPRSFQCT--SGECVDSG 394
Query: 65 SVT-----CQD----------MNECEQP-GYCSQMCTNTKGSYICSCNEGYVLEYDNHTC 108
V C+D +NEC+ G CS +CT+ + + CSC G+ L D TC
Sbjct: 395 KVCDAQRDCRDWSDELLKECGLNECQHNNGGCSHICTDRRIGFECSCPAGFRL-LDQKTC 453
Query: 109 KAINH----SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIY 164
I+ A I N + + D + G + I + +
Sbjct: 454 GDIDECEDPDACSQICVNYKGYFKCECHPGYE----MDTLSKNCKAAAGKSPSLIFTNRH 509
Query: 165 WLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGM 224
+ +I++ + I + K+ + LD T ++W D +I M
Sbjct: 510 ----EVRKIDLVRREHSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYM 558
Query: 225 DGSN----RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFR 280
D ++ + +I +++ P GL +D + +
Sbjct: 559 DKASDPAEQEVLIDEQLHSPEGLAVDW------------------------------VHK 588
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
+YW D G I A +DG L S L E A+A+D G +Y
Sbjct: 589 HMYWTDSGNK----TISVATVDGGRRCTLFSRDLSEPRAIAVDPLRGFMY---------- 634
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
W+DWG +IE+ G++G++R T++S I WPNG+TLD+ +R+Y+ DSKL + ++
Sbjct: 635 -WSDWGFQAKIEKSGLNGADRQTLVSDNIEWPNGITLDLLNQRLYWVDSKLHQLSSIDFS 693
Query: 399 GTGRQQVI 406
G R+ +I
Sbjct: 694 GGNRKMLI 701
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL--AKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D +G NR +L + D ++ P G+
Sbjct: 655 QTLVSDNIEWPNGITLDLLNQRLYWVDSKLHQLSSIDFSGGNRKMLISSPDFLSHPFGIA 714
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 715 V----FEDKVFWTD 724
>gi|291391518|ref|XP_002712167.1| PREDICTED: low density lipoprotein-related protein 1B [Oryctolagus
cuniculus]
Length = 4587
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 184/420 (43%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+GK DCP+G+DEG CD EC G CSN C P G +C+CP G L+
Sbjct: 1138 CLQPEKLCNGKRDCPDGSDEGSLCD--ECSLNNGGCSNHCSVVPGKGIVCSCPEGLQLNK 1195
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC EG+ L+ D +C +++ AF+I S R
Sbjct: 1196 DNKTCEIVDYCSNHLKCSQVCEQHKHTVKCSCYEGWRLDVDGESCTSVDPFEAFIIFSIR 1255
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1256 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAIE 1315
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 1316 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDP 1375
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 1376 RYGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAR 1433
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG+N ++ G Y +
Sbjct: 1434 SDAI------------YSALY----------------------DGTNMIEIIRGHEYLSH 1459
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 1460 PFAVS---LYGSE------VYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYHPS 1510
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 143/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +CD K DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 2890 RCIPSGGLCDNKDDCGDGSDE-RNCHINECLSKKVSGCSQDCQDLPVSYKCKCWPGFQLK 2948
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C +GY ++ DN + CK+++ FLI++
Sbjct: 2949 DDGKTCVDIDECSSGFPCSQQCINTYGTYKCFCTDGYAIQPDNPNGCKSLSDEEPFLILA 3008
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
+ H I L ++G D+R + I
Sbjct: 3009 DHHEIRKISTDGSNYTLLKQGLNNVIAIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDV 3068
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG +L + PR + LDP
Sbjct: 3069 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTILVSKRLKFPRDLCLDPQ 3128
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +L+W D E P I R+GMDG+N+S +I TKI P LT+D R+Y+AD
Sbjct: 3129 AG--YLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLYWAD 3180
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 142/548 (25%), Positives = 230/548 (41%), Gaps = 122/548 (22%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCD--LAECKHKFGLCSNTCHPTPLGALCTCPPGE 59
+++CV+L+++CDG DC +G DEG C L+ C+ C C C C G
Sbjct: 75 SNKCVHLSQLCDGILDCSDGDDEGIHCRELLSNCQQLN--CQYKCAVMRNSTRCYCEDGF 132
Query: 60 ILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---A 116
+ D C+D +EC G CSQMC NT GSY+CSC EGY+++ DN +CKA N
Sbjct: 133 EVKEDGRGCKDQDECAAYGTCSQMCMNTHGSYVCSCVEGYIMQPDNRSCKAKNEPTERPP 192
Query: 117 FLIISNRHSILVADLE---------EKGKDHRAQDI------------------------ 143
L+++N +I V L G + A D
Sbjct: 193 MLLVANSETIEVFYLNGSKMATLSPANGNEIHALDFIYNEDMICWIESRESSYQLKCIQI 252
Query: 144 -------------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ V+ +A DW+ ++Y++D +RI VC+ NG+ + L
Sbjct: 253 TKTGRLTDEWTIHILQSFHNVQQMAIDWLTRNLYFVDHVSDRIFVCNYNGSVCVTLIDLE 312
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P+ + +DP G LF+TD+G ++ER MDG NR+ II +K P L LD+ +
Sbjct: 313 LHNPKAIAVDPIAGK--LFFTDYGNIAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNK 370
Query: 251 RVYFADSKLDFIDCKSLEIKT-----------NVNYSTIFRKLYWIDEGGNGVPLKIGKA 299
VY+ D LD++ + K ++ T+F + GN ++I +
Sbjct: 371 LVYWVDLYLDYVGVVDYQGKNRHTIIQGRQVRHLYGITVFEDYLYAITSGNVNIIRINRF 430
Query: 300 NMDGSNASILVSG----QLYE--------ALALDLE-NGM-----------LYYSTLKC- 334
N +++ I + ++Y+ + A +++ +GM Y T C
Sbjct: 431 NGTDNHSLIKIESARGIRIYQKRTQPTVRSHACEVDPHGMPGGCSHICLLSSSYKTRTCR 490
Query: 335 --TRWLFWTDWG--ENPRIERIGMDGSNRSTII-----STKI-----------YWPNGLT 374
T + +D + P+ E G R I+ +TKI P L
Sbjct: 491 CRTGFNLGSDGRSCKRPKNELFLFYGKGRPGIVRGMDLNTKIADEYMIPIENLVNPRALD 550
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENG 434
T +YFAD+ I DGT R+ ++ DL + V +A+D
Sbjct: 551 FHAETNYIYFADTTSFLIGRQKIDGTERETILKDDL-----------DNVEGIAVDWIGN 599
Query: 435 MLYYSTEG 442
LY++ +G
Sbjct: 600 NLYWTNDG 607
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 125/287 (43%), Gaps = 60/287 (20%)
Query: 69 QDMNECE-QPGYCSQMCTNTKG-SYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
Q N C+ G CSQ+C T + C C GY L+ + +C+ I +FL+ S I
Sbjct: 1821 QGSNSCQLNNGGCSQLCLPTSEITRTCMCTVGYYLQKNRMSCQGIE---SFLMYSVHEGI 1877
Query: 127 LVADLEEKGK----------------DHRAQ-------------------------DIVV 145
LE K D A+ DI+
Sbjct: 1878 RGIPLEPSDKMDALMPISGTSFAVGIDFHAENDTIYWTDMGFNKISRAKRDQTWKEDIIT 1937
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + + P G
Sbjct: 1938 NGLGRVEGIAVDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIAVHPEKG- 1996
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+LFWT+WG+ P I + +DGS + ++S I WPNG+++D ++Y+ D++ D I+
Sbjct: 1997 -FLFWTEWGQMPCIGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERI 2055
Query: 266 SLEIKTN------------VNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
LE N + + +YW D ++ G N
Sbjct: 2056 DLETGGNREMVLSGSNVDMFSVAVFGAYIYWSDRAHANGSVRRGHKN 2102
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 137/328 (41%), Gaps = 74/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSNT--CHPTPLGALCTCPP 57
+C+ + CD DC +G+DE GC + C+ C + C+ C C P
Sbjct: 3761 KCIPMDLQCDRLDDCGDGSDE-EGCRITPTEYTCEDNVNPCGDDAYCNQIKTSVFCRCKP 3819
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G + + C+D+NEC G CS C NTKGSY C C+ + + N+TC A
Sbjct: 3820 GFQRNMKNRQCEDLNECLVFGTCSHQCINTKGSYKCVCDHNF--QERNNTCIAKGSEDQV 3877
Query: 118 LIISNRHSIL--------------VADLEEKGK-----DHRAQDIVV------------- 145
L I+N IL ++ +E + + +D+++
Sbjct: 3878 LYIANDTDILGFIYPFNYSGNHQQISHIEHNSRITGMDVYYQRDMIIWSTQFNPGGIFYK 3937
Query: 146 -----------SGLDLVE-----GLAYDWIGGHIYWLD-SRLN--------------RIE 174
SGL E +A DW+ G+IYW D SR++ I
Sbjct: 3938 RIHGREKRQANSGLICPEFKRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSIN 3997
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V NG N L + +P + ++P G ++WT G++ IE MDG+ R ++
Sbjct: 3998 VGQVNGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVIGDHSHIEEAAMDGTLRRILVQ 4055
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D + R+Y+AD +L I
Sbjct: 4056 KNLQRPTGLAVDHFSERIYWADFELSII 4083
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 107/240 (44%), Gaps = 55/240 (22%)
Query: 77 PGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA-DLEE 133
PG CS +C +++ + C C G+ L D +CK + R I+ DL
Sbjct: 471 PGGCSHICLLSSSYKTRTCRCRTGFNLGSDGRSCKRPKNELFLFYGKGRPGIVRGMDLNT 530
Query: 134 KGKDH-----------RAQD------------------------------IVVSGLDLVE 152
K D RA D I+ LD VE
Sbjct: 531 KIADEYMIPIENLVNPRALDFHAETNYIYFADTTSFLIGRQKIDGTERETILKDDLDNVE 590
Query: 153 GLAYDWIGGHIYWL-DSRLNRIEVC--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
G+A DWIG ++YW D I V ++ +R L + ++ PRG+++DP G W++
Sbjct: 591 GIAVDWIGNNLYWTNDGHRKTINVARLEKASQSRKTLLEGEMSHPRGIVVDPVNG--WMY 648
Query: 210 WTDWGENP------RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
WTDW E+ RIE+ MDG NR +++K+ WPNGLTLD + +Y+ D+ D I+
Sbjct: 649 WTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHSNTLYWCDAYYDHIE 708
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G N ++ST I PNGLT+D ++YF+D L
Sbjct: 2315 ECQNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDHRAEKLYFSDGSLGK 2374
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 2375 IERCEYDGSQRHVIV 2389
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 128/333 (38%), Gaps = 59/333 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS MC N S C+C L D TC + FL+ + R I D++
Sbjct: 1526 GPCSHMCLINYNRSAACACPHLMKLSSDKKTCYEMK---KFLLYARRSEIRGVDIDNPYF 1582
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ V +D V + +D +YW D + I+ NGT + +I RG
Sbjct: 1583 NFITA-FTVPDIDDVTVIDFDAYEERLYWTDIKTQTIKRAFINGTGLETVISRDIQSIRG 1641
Query: 197 MMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R L+W + + +I +DGS +++II
Sbjct: 1642 LAVDWV--SRNLYWISSEFDETQINVARLDGSLKTSII---------------------- 1677
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+D C + + KLYW D GN + + ANMDGSN+ IL Q
Sbjct: 1678 -HGIDKPQCLAAH--------PVRGKLYWTD--GNTINM----ANMDGSNSKILFQNQKE 1722
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
L++D LY W G N I R +DG N I S K
Sbjct: 1723 PVGLSIDYVENKLY-----------WISSG-NGTINRCNLDGGNLEVIESMKEELTKATA 1770
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
L I +++++AD L + CN GR IL
Sbjct: 1771 LTIMDKKLWWADQNLAQLGTCN-KRDGRNPTIL 1802
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 101/263 (38%), Gaps = 57/263 (21%)
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
+ S+ H + +++ +D R I+V + VEGLAY +YW S + I
Sbjct: 2229 IFYSDAHFGNIQLIKDNWEDRR---IIVENVGSVEGLAYHRAWDTLYWTSSTTSSITRHT 2285
Query: 178 ENGTNRIVLAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRS 230
+ T K+ + P + LD +FWT+W E +P I R + G N
Sbjct: 2286 VDQTRPGAFHKEAVITMSEDDHPHVLALDEC--QNLMFWTNWNEQHPSIMRSTLTGKNAQ 2343
Query: 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN 290
++ST I PNGLT+D ++YF+D L
Sbjct: 2344 VVVSTDILTPNGLTIDHRAEKLYFSDGSLG------------------------------ 2373
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
KI + DGS ++V L+L + + ++FW+DWG +
Sbjct: 2374 ----KIERCEYDGSQRHVIVKSGPGTFLSLAVYDN-----------YIFWSDWGRRAILR 2418
Query: 351 RIGMDGSNRSTIISTKIYWPNGL 373
G + + + S + P G+
Sbjct: 2419 SNKYTGGDTTILRSDIPHQPMGI 2441
>gi|327388682|gb|AEA72687.1| very low-density lipoprotein receptor-like protein [Branchiostoma
lanceolatum]
Length = 858
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/310 (35%), Positives = 156/310 (50%), Gaps = 51/310 (16%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPG------CDLAECKHKFGLCSNTCHPTPLGALCT 54
V ++C+ +KVCD DC +G+DE PG C++ ECK G CS C TP CT
Sbjct: 329 VLEQCIPFSKVCDRNDDCADGSDE-PGTWTNVQCNVDECKVDNGSCSQGCVDTPHSYYCT 387
Query: 55 CPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHS 114
C G L +D TC+D +EC G CSQ+C NT G Y C C EGY L+ + CKA
Sbjct: 388 CDNGFELQDDKRTCKDKDECADFGTCSQLCENTHGGYKCECVEGYTLDPRHGFCKAEGEE 447
Query: 115 AAFL-----------IISNRHSILVADL------------------------------EE 133
+ + +N ++ LV DL E
Sbjct: 448 LKLIFANRRDLRMIDLATNEYTELVGDLRSAIATDVDVPSKRVYWTDVAREEIYSAPIEA 507
Query: 134 KGKDHRAQDIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
R++ +VS G+ +G+A DWI +YW D+ N I V +G R L ++
Sbjct: 508 DSNGERSKVRLVSEGIHTPDGVAVDWIHHKMYWTDTGTNTISVSQLDGNLRKTLFATDLD 567
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
+PR + LDP+ G +++W+DWG+ +IER GM+G R ++ T I WPNGLTLDI +R+
Sbjct: 568 EPRALALDPTEG--FMYWSDWGQPAKIERAGMNGFFREPLVQTGIEWPNGLTLDILGKRI 625
Query: 253 YFADSKLDFI 262
Y+ D+KL I
Sbjct: 626 YWVDAKLHTI 635
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 178/435 (40%), Gaps = 91/435 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++ T+ CDGK DC +G+DE C ++ C C G L C P + +
Sbjct: 285 CIDGTRQCDGKRDCEDGSDERHDCPEIIRCDLTREF---ECINRNTGVLEQCIPFSKVCD 341
Query: 64 DSVTCQD--------------MNECE-QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTC 108
+ C D ++EC+ G CSQ C +T SY C+C+ G+ L+ D TC
Sbjct: 342 RNDDCADGSDEPGTWTNVQCNVDECKVDNGSCSQGCVDTPHSYYCTCDNGFELQDDKRTC 401
Query: 109 KAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS 168
K + A F S L + K + VEG D G
Sbjct: 402 KDKDECADFGTCSQ----LCENTHGGYK-----------CECVEGYTLDPRHGFCKAEGE 446
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQPRG-----MMLDPSPGTRWLFWTDWGE----NPRI 219
L I + I LA + T+ G + D ++ ++WTD + I
Sbjct: 447 ELKLI-FANRRDLRMIDLATNEYTELVGDLRSAIATDVDVPSKRVYWTDVAREEIYSAPI 505
Query: 220 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIF 279
E ++ ++S I+ P+G+ +D I
Sbjct: 506 EADSNGERSKVRLVSEGIHTPDGVAVDW------------------------------IH 535
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRW 337
K+YW D G N + + + +DG+ L + L E ALALD G +Y
Sbjct: 536 HKMYWTDTGTNTISV----SQLDGNLRKTLFATDLDEPRALALDPTEGFMY--------- 582
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
W+DWG+ +IER GM+G R ++ T I WPNGLTLDI +R+Y+ D+KL I
Sbjct: 583 --WSDWGQPAKIERAGMNGFFREPLVQTGIEWPNGLTLDILGKRIYWVDAKLHTISSVTT 640
Query: 398 DGTGRQQVILIDLMV 412
G R+Q+I + ++
Sbjct: 641 TGADRRQIIQDETLL 655
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 81/211 (38%), Gaps = 22/211 (10%)
Query: 241 NGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDE-----GGNGVPLK 295
NG L R D DF C L T+ Y + Y +D G LK
Sbjct: 390 NGFELQDDKRTCKDKDECADFGTCSQLCENTHGGYKCECVEGYTLDPRHGFCKAEGEELK 449
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE----NPRIER 351
+ AN L + + Y L DL + + + R ++WTD + IE
Sbjct: 450 LIFANRRDLRMIDLATNE-YTELVGDLRSAIATDVDVPSKR-VYWTDVAREEIYSAPIEA 507
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
++ ++S I+ P+G+ +D ++Y+ D+ + I DG R+ + DL
Sbjct: 508 DSNGERSKVRLVSEGIHTPDGVAVDWIHHKMYWTDTGTNTISVSQLDGNLRKTLFATDL- 566
Query: 412 VEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ ALALD G +Y+S G
Sbjct: 567 ----------DEPRALALDPTEGFMYWSDWG 587
>gi|432099574|gb|ELK28715.1| Low-density lipoprotein receptor [Myotis davidii]
Length = 738
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 159/300 (53%), Gaps = 46/300 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ + KVC+ DC + +DE C+ EC G CS+ C +G C CP G L+
Sbjct: 157 CITMDKVCNSVRDCRDWSDEPLKECETNECLTNKGGCSHLCKDLKIGYECLCPEGFRLA- 215
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D C+D++ECE P CSQ+C N+ GSY C C EG+ L+ CKA++ + A+L +NR
Sbjct: 216 DQRRCEDIDECEDPDTCSQLCVNSVGSYQCKCEEGFRLDPFTKACKAVD-TIAYLFFTNR 274
Query: 124 HSILV--------------------------------ADLEEKG----KDHRAQD----- 142
H + +DL ++ + HR +
Sbjct: 275 HEVRKMTLDRSEYTSLIPNLKNAVALDVEVHASRVYWSDLSQRKIYSTQIHRESNSSYDT 334
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ GL +GLA DWI G++YW DS L + V D G R L K+ ++PR +++DP
Sbjct: 335 IIDKGLQAPDGLAVDWIHGNLYWTDSMLGTVSVADTKGVKRKTLFKEKGSKPRAIVVDPR 394
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL I
Sbjct: 395 HG--FMYWTDWGTPAKIKKGGLNGVDIHSLVTEDIQWPNGITLDLSSDRLYWVDSKLHSI 452
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 177/452 (39%), Gaps = 101/452 (22%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTC---------------H 45
+RC+ CDG+ DC NG+DE GC +A C+ +F TC
Sbjct: 74 VNRCIPEFWRCDGQIDCENGSDEQ-GCSMATCRPDEFQCFDGTCIHGSQQCDREHDCKDM 132
Query: 46 PTPLG----ALC------TCPPGEILSNDSVT-----CQD-----MNECE------QPGY 79
LG LC C GE ++ D V C+D + ECE G
Sbjct: 133 SDELGCINVTLCEGPNKFKCHSGECITMDKVCNSVRDCRDWSDEPLKECETNECLTNKGG 192
Query: 80 CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHR 139
CS +C + K Y C C EG+ L D C+ I+ S V + K ++
Sbjct: 193 CSHLCKDLKIGYECLCPEGFRLA-DQRRCEDIDECEDPDTCSQLCVNSVGSYQCKCEEGF 251
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
D V+ +AY +++ + R D + ++ N + L
Sbjct: 252 RLDPFTKACKAVDTIAY------LFFTNRHEVRKMTLDRSEYTSLIPNLKN-----AVAL 300
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRS--TIISTKIYWPNGLTLDIATRRVYFADS 257
D ++W+D + SN S TII + P+GL +D +Y+ DS
Sbjct: 301 DVEVHASRVYWSDLSQRKIYSTQIHRESNSSYDTIIDKGLQAPDGLAVDWIHGNLYWTDS 360
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
L + S+ V T+F++ G A
Sbjct: 361 MLGTV---SVADTKGVKRKTLFKE-----------------------------KGSKPRA 388
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
+ +D +G +Y WTDWG +I++ G++G + ++++ I WPNG+TLD+
Sbjct: 389 IVVDPRHGFMY-----------WTDWGTPAKIKKGGLNGVDIHSLVTEDIQWPNGITLDL 437
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
++ R+Y+ DSKL I + G G ++ IL D
Sbjct: 438 SSDRLYWVDSKLHSISSIDLTG-GHRKTILED 468
>gi|355750521|gb|EHH54848.1| hypothetical protein EGM_03938, partial [Macaca fascicularis]
Length = 4485
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 184/420 (43%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+GK DCP+G+DEG CD EC G CSN C P G +C+CP G L+
Sbjct: 1036 CLQPEKLCNGKRDCPDGSDEGDLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLNK 1093
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC EG+ L+ D +C +++ AF+I S R
Sbjct: 1094 DNKTCEIVDYCSNHLKCSQVCEQHKHTVKCSCYEGWKLDVDGESCTSVDPFEAFIIFSIR 1153
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1154 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAIE 1213
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 1214 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDP 1273
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 1274 RYGI--LFWTDWDANFPRIESASMSGAARKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAR 1331
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG+N ++ G Y +
Sbjct: 1332 SDAI------------YSALY----------------------DGTNMIEIIRGHEYLSH 1357
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 1358 PFAVS---LYGSE------VYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYHPS 1408
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 143/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +C+ K DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 2788 RCIPSGGLCNNKDDCGDGSDE-RNCHINECLSKKVSGCSQDCQDLPISYKCKCWPGFQLK 2846
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C +GY ++ DN + CK+++ FLI++
Sbjct: 2847 DDGKTCVDIDECSSGFPCSQQCINTYGTYKCLCTDGYEIQPDNPNGCKSLSDEEPFLILA 2906
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
+ H I L ++G D+R + I
Sbjct: 2907 DHHEIRKISTDGSNYTLLKQGLNNVIAIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDI 2966
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG +L + PR + LDP
Sbjct: 2967 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTILVSKRLKFPRDLSLDPR 3026
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +L+W D E P I R+GMDG+N+S +I TKI P LT+D R+Y+AD
Sbjct: 3027 AG--YLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLYWAD 3078
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 131/286 (45%), Gaps = 58/286 (20%)
Query: 26 PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCT 85
P C C++K + N+ C C G + D +C+D +EC G CSQ C
Sbjct: 4 PNCQQLNCQYKCTMVGNS-------TRCYCENGFEIKEDGRSCKDQDECAVYGTCSQTCR 56
Query: 86 NTKGSYICSCNEGYVLEYDNHTCKAI---NHSAAFLIISNRHSI---------------- 126
NT GSY CSC EGY+++ DN +CKA L+I+N +I
Sbjct: 57 NTHGSYTCSCVEGYLMQSDNRSCKAKIEPTDRPPILLIANFETIEIFYLNGSKMATLSSV 116
Query: 127 ---------------LVADLEEKGKDHRAQDI---------------VVSGLDLVEGLAY 156
++ +E + ++ + I ++ V+ +A
Sbjct: 117 NGNEIHALDFIYNEDMICWIESRESSNQLKCIQITKAGGLTDEWTINILQSFHNVQQMAI 176
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ ++Y++D +RI VC+ NG+ I L + P+ + +DP G LF+TD+G
Sbjct: 177 DWLTRNLYFVDHVSDRIFVCNYNGSVCITLIDLELHNPKAIAVDPIAGK--LFFTDYGNV 234
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
++ER MDG NR+ II +K P L LD+ + VY+ D LD++
Sbjct: 235 AKVERCDMDGMNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYV 280
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 140/323 (43%), Gaps = 61/323 (18%)
Query: 69 QDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
Q N C+ G CSQ+C T + + C C GY L+ + +C+ I +FL+ S I
Sbjct: 1719 QGSNSCQLNNGGCSQLCLPTSETTRTCMCTVGYYLQKNRMSCQGIE---SFLMYSVHEGI 1775
Query: 127 LVADLEEKGK----------------DHRAQ-------------------------DIVV 145
LE K D A+ DI+
Sbjct: 1776 RGIPLEPSDKMDALMPISGTSFAVGIDFHAENDTIYWTDMGFNKISRAKRDQTWKEDIIT 1835
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + + P G
Sbjct: 1836 NGLGRVEGIAIDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIAVHPEKGL 1895
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
LFWT+WG+ P I + +DGS + ++S I WPNG+++D ++Y+ D++ D I+
Sbjct: 1896 --LFWTEWGQMPCIGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERI 1953
Query: 266 SLEI---------KTNVNYSTIF---RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
LE +NV+ ++ +YW D ++ G N D + + +G
Sbjct: 1954 DLETGGHREVVLSGSNVDMFSVAVFGAYIYWSDRAHANGSVRRGHKN-DATETITMRTGL 2012
Query: 314 LYEALALDLENGMLYYSTLKCTR 336
+ + N + T C R
Sbjct: 2013 GVNLKEVKIFNRVREKGTNVCAR 2035
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 137/328 (41%), Gaps = 74/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSN--TCHPTPLGALCTCPP 57
+C+ + CD DC +G+DE GC +A C+ C + C+ C C P
Sbjct: 3659 KCIPMDLQCDRLDDCGDGSDE-QGCRIAPTEYTCEDNVNPCGDDANCNQIKTSVFCRCKP 3717
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G + C+D+NEC G CS C N +GSY C C++ + + N+TC A
Sbjct: 3718 GFQRNMKHRQCEDLNECLVFGTCSHQCINVEGSYKCVCDQNF--QERNNTCIAKGSEDQV 3775
Query: 118 LIISNRHSIL--------------VADLEEKGK-----DHRAQDIVV------------- 145
L I+N IL ++ +E + + +D+++
Sbjct: 3776 LYIANDTDILGFIYPFNYSGDHQQISHIEHNSRITGMDVYYQRDMIIWSTQFNPGGIFYK 3835
Query: 146 -----------SGLDLVE-----GLAYDWIGGHIYWLD-SRLN--------------RIE 174
SGL E +A DW+ G+IYW D SR++ I
Sbjct: 3836 RIHGREKRQANSGLICPEFKRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSIN 3895
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V NG N L + +P + ++P G ++WT G++ IE MDG+ R ++
Sbjct: 3896 VGQLNGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVVGDHSHIEEAAMDGTLRRILVQ 3953
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D + R+Y+AD +L I
Sbjct: 3954 KNLQRPTGLAVDYFSERIYWADFELSII 3981
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 107/240 (44%), Gaps = 55/240 (22%)
Query: 77 PGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA-DLEE 133
PG CS +C +++ + C C G+ L D +CK + R I+ DL
Sbjct: 369 PGGCSHICLLSSSYKTRTCRCRTGFNLGSDGRSCKRPKNELFLFYGKGRPGIVRGMDLNT 428
Query: 134 KGKDH-----------RAQD------------------------------IVVSGLDLVE 152
K D RA D I+ LD VE
Sbjct: 429 KIADEYMIPIENLVNPRALDFHAETNYIYFADTTSFLIGRQKIDGTERETILKDDLDNVE 488
Query: 153 GLAYDWIGGHIYWL-DSRLNRIEVC--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
G+A DWIG ++YW D I V ++ +R L + ++ PRG+++DP G W++
Sbjct: 489 GIAVDWIGNNLYWTNDGHRKTINVARLEKASQSRKTLLEGEMSHPRGIVVDPING--WMY 546
Query: 210 WTDWGENP------RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
WTDW E+ RIE+ MDG NR +++K+ WPNGLTLD T +Y+ D+ D I+
Sbjct: 547 WTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTNTLYWCDAYYDHIE 606
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 17/131 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCT 335
+ R LY++D V +I N +GS L+ +L+ +A+A+D G L
Sbjct: 179 LTRNLYFVDH----VSDRIFVCNYNGSVCITLIDLELHNPKAIAVDPIAGKL-------- 226
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
F+TD+G ++ER MDG NR+ II +K P L LD+ + VY+ D LD++
Sbjct: 227 ---FFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVGVV 283
Query: 396 NYDGTGRQQVI 406
+Y G R +I
Sbjct: 284 DYQGKNRHAII 294
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G N ++ST I PNGLT+D ++YF+D L
Sbjct: 2213 ECQNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGK 2272
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 2273 IERCEYDGSQRHVIV 2287
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 139/311 (44%), Gaps = 41/311 (13%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS MC N S C+C L D TC + FL+ + R I D++
Sbjct: 1424 GPCSHMCLINHNRSAACACPHLMKLSSDKKTCYEMK---KFLLYARRSEIRGVDIDNPYF 1480
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ V +D V + +D +YW D + I+ NGT + +I RG
Sbjct: 1481 NFITA-FTVPDIDDVTVIDFDASEERLYWTDIKTQTIKRAFINGTGLETVISRDIQSIRG 1539
Query: 197 MMLDPSPGTRWLFW--TDWGENPRIERIGMDGSNRSTIIS--------------TKIYWP 240
+ +D +R L+W +++ E +I +DGS +++II K+YW
Sbjct: 1540 LAVDWV--SRNLYWISSEYDET-QINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWT 1596
Query: 241 NGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+G T+++A + ++SK+ F + K + +++Y + KLYWI GNG I + N
Sbjct: 1597 DGNTINMAN--MDGSNSKILFQNQKE-PVGLSIDY--VENKLYWI-SSGNGT---INRCN 1647
Query: 301 MDGSNASILVS--GQLYEALALDLENGMLYYSTLKCTRWLFWTDW-GENPRIERIGMDGS 357
+ G N ++ S +L +A AL + + L+++ + + G NP I R +
Sbjct: 1648 LGGGNLEVIESMKEELTKATALTIMDKKLWWADQNLAQLGTCSKRDGRNPTILR-----N 1702
Query: 358 NRSTIISTKIY 368
S ++ K+Y
Sbjct: 1703 KTSGVVHMKVY 1713
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 94/242 (38%), Gaps = 58/242 (23%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-----NRIEVCDENGTNR---IVLAKDNIT 192
+ ++V + VEGLAY +YW S + ++ +R I +++D+
Sbjct: 2147 RQVIVENVGSVEGLAYHRAWDTLYWTSSTTSSITRHTVDQTRPGAFDREAVITMSEDD-- 2204
Query: 193 QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
P + LD +FWT+W E +P I R + G N ++ST I PNGLT+D +
Sbjct: 2205 HPHVLALDEC--QNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEK 2262
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+YF+D L KI + DGS ++V
Sbjct: 2263 LYFSDGSLG----------------------------------KIERCEYDGSQRHVIVK 2288
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
L+L + + ++FW+DWG + G + + S + P
Sbjct: 2289 SGPGTFLSLAVYDN-----------YIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPM 2337
Query: 372 GL 373
G+
Sbjct: 2338 GI 2339
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 94/224 (41%), Gaps = 33/224 (14%)
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++D L+WTD + I+R ++G+ T+IS I GL +D +R +Y+ S
Sbjct: 1496 VIDFDASEERLYWTDI-KTQTIKRAFINGTGLETVISRDIQSIRGLAVDWVSRNLYWISS 1554
Query: 258 KLDFIDCKSLEIKTNVNYSTIFR--------------KLYWIDEGGNGVPLKIGKANMDG 303
+ D + ++ S I KLYW D GN I ANMDG
Sbjct: 1555 EYDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD--GN----TINMANMDG 1608
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
SN+ IL Q E + L ++ Y K L+W G N I R + G N I
Sbjct: 1609 SNSKILFQNQ-KEPVGLSID-----YVENK----LYWISSG-NGTINRCNLGGGNLEVIE 1657
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
S K L I +++++AD L + C+ GR IL
Sbjct: 1658 SMKEELTKATALTIMDKKLWWADQNLAQLGTCS-KRDGRNPTIL 1700
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 155/425 (36%), Gaps = 79/425 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-----DLAECKHKFGLCSNT-CHPTPLGA--LCTCP 56
C+ ++C+G DC + +DE CK CSN C P L L C
Sbjct: 3615 CLQSEQMCNGIDDCGDNSDEDHCTGKLTYKARPCKKDEFACSNKKCIPMDLQCDRLDDCG 3674
Query: 57 PGE-----ILSNDSVTCQD-MNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110
G ++ TC+D +N C C+Q+ K S C C G+ + C+
Sbjct: 3675 DGSDEQGCRIAPTEYTCEDNVNPCGDDANCNQI----KTSVFCRCKPGFQRNMKHRQCED 3730
Query: 111 INHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL 170
+N F S+ Q I V G +Y + +
Sbjct: 3731 LNECLVFGTCSH------------------QCINVEG-------SYKCVCDQNF-----Q 3760
Query: 171 NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS-NR 229
R C G+ VL N T G + + + N RI GMD R
Sbjct: 3761 ERNNTCIAKGSEDQVLYIANDTDILGFIYPFNYSGDHQQISHIEHNSRI--TGMDVYYQR 3818
Query: 230 STIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
II + + P G+ I R A+S L C + ++ + +YW D
Sbjct: 3819 DMIIWSTQFNPGGIFYKRIHGREKRQANSGLI---CPEFKRPRDIAVDWVAGNIYWTDHS 3875
Query: 289 G-----------NGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ I ++G N + L++ E A+A++ + GM+Y
Sbjct: 3876 RMHWFSYYTTHWTSLRYSINVGQLNGPNCTRLLTNMAGEPYAIAVNPKRGMMY------- 3928
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WT G++ IE MDG+ R ++ + P GL +D + R+Y+AD +L I
Sbjct: 3929 ----WTVVGDHSHIEEAAMDGTLRRILVQKNLQRPTGLAVDYFSERIYWADFELSIIGSV 3984
Query: 396 NYDGT 400
YDG+
Sbjct: 3985 LYDGS 3989
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ +V + + GL D+ +Y+ D L +IE C+ +G+ R V+ K G L
Sbjct: 2240 AQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGKIERCEYDGSQRHVIVKSG----PGTFL 2295
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ ++FW+DWG + G + + S + P G+
Sbjct: 2296 SLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGI 2339
>gi|403259042|ref|XP_003922046.1| PREDICTED: low-density lipoprotein receptor-related protein 1B
[Saimiri boliviensis boliviensis]
Length = 4632
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/422 (31%), Positives = 182/422 (43%), Gaps = 104/422 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+GK DCP+G+DEG CD EC G CSN C P G +C+CP G L+
Sbjct: 1183 CLQPEKLCNGKKDCPDGSDEGDLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLNK 1240
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC EG+ L+ D +C +++ AF+I S R
Sbjct: 1241 DNKTCEIVDYCSNHLKCSQVCEQHKHTVKCSCYEGWKLDVDGESCTSVDPFEAFIIFSIR 1300
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1301 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAIE 1360
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 1361 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDP 1420
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 1421 RYGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAR 1478
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--E 316
D I YS ++ DG+N ++ G Y
Sbjct: 1479 SDAI------------YSALY----------------------DGTNMIEIIRGHEYLSH 1504
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYW 369
A+ L +Y WTDW N + G N S I T +IY
Sbjct: 1505 PFAVSLHGSEVY-----------WTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYH 1553
Query: 370 PN 371
P+
Sbjct: 1554 PS 1555
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 143/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +C+ K DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 2935 RCIPSGGLCNNKDDCGDGSDE-RNCHINECLSKKVSGCSQDCQDLPVSYKCKCWPGFQLK 2993
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C +GY ++ +N ++CK+++ FLI++
Sbjct: 2994 DDGKTCVDIDECSSGFPCSQQCINTYGTYKCLCTDGYEIQPNNPNSCKSLSDEEPFLILA 3053
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
+ H I L ++G D+R + I
Sbjct: 3054 DHHEIRKISTDGSNYTLLKQGLNNVIAIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDI 3113
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG +L + PR + LDP
Sbjct: 3114 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTILVSKRLKFPRDLSLDPR 3173
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +L+W D E P I R+GMDG+N+S +I KI P LT+D R+Y+AD
Sbjct: 3174 AG--YLYWIDCCEYPHIGRVGMDGTNQSVVIENKISRPMALTIDYVNHRLYWAD 3225
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 151/312 (48%), Gaps = 55/312 (17%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCD--LAECKHKFGLCSNTCHPTPLGALCTCPPGE 59
++CV+L+++C+G DCP+G DEG C L+ C+ C C C C G
Sbjct: 120 TNKCVHLSQLCNGVFDCPDGYDEGVHCQELLSNCQQLN--CQYKCTMVRNSTRCYCEDGF 177
Query: 60 ILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---A 116
+ D +C+D +EC G CSQ CTNT GSY CSC EGY+++ DN +CKA A
Sbjct: 178 EIKEDGRSCKDQDECAVYGTCSQTCTNTHGSYTCSCVEGYLMQPDNRSCKAKIEPADRPP 237
Query: 117 FLIISNRHSI-------------------------------LVADLEEKGKDHRAQDI-- 143
L+ISN +I ++ +E + ++ + I
Sbjct: 238 ILLISNFETIEVFYLNGSKIATLSSVNGNEIHTLDFIYNEDMICWIESRESSNQLKCIQI 297
Query: 144 -------------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ V+ +A DW+ ++Y++D +RI VC+ NG+ + L
Sbjct: 298 TKAGGLSDEWTINILQSFHNVQQMAIDWLTRNLYFVDHVSDRIFVCNYNGSVCVTLIDLE 357
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P+ + +DP G LF+TD+G ++ER MDG NR+ II +K P L LD+ +
Sbjct: 358 LHNPKAIAVDPIAGK--LFFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNK 415
Query: 251 RVYFADSKLDFI 262
VY+ D LD++
Sbjct: 416 LVYWVDLYLDYV 427
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 137/323 (42%), Gaps = 61/323 (18%)
Query: 69 QDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
Q N C+ G CSQ+C T + + C C GY L+ + +C+ + +FL+ S I
Sbjct: 1866 QGSNSCQLNNGGCSQLCLPTSETTRTCMCTVGYYLQKNRMSCQGVE---SFLMYSVHEGI 1922
Query: 127 LVADLEEKGK----------------DHRAQ-------------------------DIVV 145
LE K D A+ DI+
Sbjct: 1923 RGIPLEPSDKMDALMPISGASFAVGIDFHAENDTIYWTDMGFNKISRAKRDQTWKEDIIT 1982
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + + P G
Sbjct: 1983 NGLGRVEGIAIDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIAVHPEKGL 2042
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
LFWT+WG+ P I + +DGS + ++S I WPNG+++D ++Y+ D++ D I+
Sbjct: 2043 --LFWTEWGQMPCIGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERI 2100
Query: 266 SLEIKTN------------VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
LE N + + +YW D ++ G N D + + +G
Sbjct: 2101 DLETGGNREMVLSGSNVDMFSVAVFGAYIYWSDRAHANGSVRRGHKN-DATETVTMRTGL 2159
Query: 314 LYEALALDLENGMLYYSTLKCTR 336
+ + N + T C R
Sbjct: 2160 GVNLKEVKIFNRVREKGTNVCAR 2182
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 134/328 (40%), Gaps = 74/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSNT--CHPTPLGALCTCPP 57
+C+ + CD DC +G+DE GC +A C+ C + C+ C C P
Sbjct: 3806 KCIPMDLQCDRLDDCGDGSDE-QGCRIAPTDYTCEDNVNPCGDDAYCNQIKTSVFCRCKP 3864
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G + + C+D+NEC G CS C N +GSY C C++ + + N+TC A
Sbjct: 3865 GFQRNMKNRKCEDLNECLVFGTCSHQCINVEGSYKCVCDQNF--QERNNTCIAKGSEDQV 3922
Query: 118 LIISNRHSIL--------------VADLEE------------------------------ 133
L I+N IL ++ +E
Sbjct: 3923 LYIANDTDILGFIYPFNYSGDHQQISHIEHNSRITGMDVYYQRDMIIWSTQFNPGGIFYK 3982
Query: 134 --KGKDHRAQD--IVVSGLDLVEGLAYDWIGGHIYWLD-SRLN--------------RIE 174
G++ R + ++ +A DW+ G+IYW D SR++ I
Sbjct: 3983 RIHGREKRQANSGLICPEFKRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSIN 4042
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V NG N L + +P + ++P G ++WT G++ IE MDG+ R ++
Sbjct: 4043 VGQLNGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVVGDHSHIEEAAMDGTLRRILVQ 4100
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D + R+Y+AD +L I
Sbjct: 4101 KNLQRPTGLAVDYFSERIYWADFELSII 4128
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 106/240 (44%), Gaps = 55/240 (22%)
Query: 77 PGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA-DLEE 133
PG CS +C +++ + C C G+ L D +CK + R I+ DL
Sbjct: 516 PGGCSHICLLSSSYKTRTCRCRTGFNLGSDGRSCKRPKNELFLFYGKGRPGIVRGMDLNT 575
Query: 134 KGKDH-----------RAQD------------------------------IVVSGLDLVE 152
K D RA D I+ LD VE
Sbjct: 576 KIADEYMIPIENLVNPRALDFHAETNYIYFADTTSFLIGRQKIDGTERETILKDDLDNVE 635
Query: 153 GLAYDWIGGHIYWL-DSRLNRIEVC--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
G+A DWIG ++YW D I V ++ +R L + ++ PRG+++DP G W++
Sbjct: 636 GIAVDWIGNNLYWTNDGHRKTINVARLEKASQSRKTLLEGEMSHPRGIVVDPVNG--WMY 693
Query: 210 WTDWGENP------RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
WTDW E+ RIE+ MDG NR +++ + WPNGLTLD T +Y+ D+ D I+
Sbjct: 694 WTDWEEDEIDGSVGRIEKAWMDGFNRQIFVTSNMLWPNGLTLDFHTNTLYWCDAYYDHIE 753
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G N ++ST I PNGLT+D ++YF+D L
Sbjct: 2360 ECQNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGK 2419
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 2420 IERCEYDGSQRHVIV 2434
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 141/322 (43%), Gaps = 42/322 (13%)
Query: 69 QDMNECEQ---PGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
Q N CE G CS MC N S C+C L D TC + FL+ +
Sbjct: 1559 QAPNPCEANDGKGPCSHMCLINHNRSAACACPHLMKLSSDKKTCYEMK---KFLLYARHS 1615
Query: 125 SILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
I D++ + V +D V + +D +YW D + I+ NGT
Sbjct: 1616 EIRGVDIDNPYFNFITA-FTVPDIDDVTVIDFDASEERLYWTDIKTQTIKRAFINGTGLE 1674
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIIS--------- 234
+ +I RG+ +D +R L+W + + +I +DGS +++II
Sbjct: 1675 TVISRDIQSIRGLAVDWV--SRNLYWISSEFDETQINVARLDGSLKTSIIHGIDKPQCLA 1732
Query: 235 -----TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
K+YW +G T+++A + ++SK+ F + K + +++Y + KLYWI G
Sbjct: 1733 AHPVRGKLYWTDGNTINMAN--MDGSNSKILFQNQKE-PVGLSIDY--VENKLYWI-SSG 1786
Query: 290 NGVPLKIGKANMDGSNASILVS--GQLYEALALDLENGMLYYSTLKCTRWLFWTDW-GEN 346
NG I + N+DG N ++ S +L +A AL + + L+++ + + G N
Sbjct: 1787 NGT---INRCNLDGGNLEVIESMKEELTKATALTIMDKKLWWADQNLAQLGTCSKRDGRN 1843
Query: 347 PRIERIGMDGSNRSTIISTKIY 368
P I R + S ++ K+Y
Sbjct: 1844 PTILR-----NKTSGVVHMKVY 1860
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 155/424 (36%), Gaps = 79/424 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-----DLAECKHKFGLCSNT-CHPTPLGA--LCTCP 56
C+ ++C+G DC + +DE CK CSN C P L L C
Sbjct: 3762 CLQSEQMCNGIDDCGDNSDEDHCSGKLTYKARPCKKDEFACSNKKCIPMDLQCDRLDDCG 3821
Query: 57 PGE-----ILSNDSVTCQD-MNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110
G ++ TC+D +N C YC+Q+ K S C C G+ N C+
Sbjct: 3822 DGSDEQGCRIAPTDYTCEDNVNPCGDDAYCNQI----KTSVFCRCKPGFQRNMKNRKCED 3877
Query: 111 INHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL 170
+N F S+ Q I V G +Y + +
Sbjct: 3878 LNECLVFGTCSH------------------QCINVEG-------SYKCVCDQNF-----Q 3907
Query: 171 NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS-NR 229
R C G+ VL N T G + + + N RI GMD R
Sbjct: 3908 ERNNTCIAKGSEDQVLYIANDTDILGFIYPFNYSGDHQQISHIEHNSRI--TGMDVYYQR 3965
Query: 230 STIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
II + + P G+ I R A+S L C + ++ + +YW D
Sbjct: 3966 DMIIWSTQFNPGGIFYKRIHGREKRQANSGLI---CPEFKRPRDIAVDWVAGNIYWTDHS 4022
Query: 289 G-----------NGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ I ++G N + L++ E A+A++ + GM+Y
Sbjct: 4023 RMHWFSYYTTHWTSLRYSINVGQLNGPNCTRLLTNMAGEPYAIAVNPKRGMMY------- 4075
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WT G++ IE MDG+ R ++ + P GL +D + R+Y+AD +L I
Sbjct: 4076 ----WTVVGDHSHIEEAAMDGTLRRILVQKNLQRPTGLAVDYFSERIYWADFELSIIGSV 4131
Query: 396 NYDG 399
YDG
Sbjct: 4132 LYDG 4135
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 95/224 (42%), Gaps = 33/224 (14%)
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++D L+WTD + I+R ++G+ T+IS I GL +D +R +Y+ S
Sbjct: 1643 VIDFDASEERLYWTDI-KTQTIKRAFINGTGLETVISRDIQSIRGLAVDWVSRNLYWISS 1701
Query: 258 KLDFIDCKSLEIKTNVNYSTIFR--------------KLYWIDEGGNGVPLKIGKANMDG 303
+ D + ++ S I KLYW D GN I ANMDG
Sbjct: 1702 EFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD--GN----TINMANMDG 1755
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
SN+ IL Q E + L ++ Y K L+W G N I R +DG N I
Sbjct: 1756 SNSKILFQNQ-KEPVGLSID-----YVENK----LYWISSG-NGTINRCNLDGGNLEVIE 1804
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
S K L I +++++AD L + C+ GR IL
Sbjct: 1805 SMKEELTKATALTIMDKKLWWADQNLAQLGTCS-KRDGRNPTIL 1847
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 94/242 (38%), Gaps = 58/242 (23%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-----NRIEVCDENGTNR---IVLAKDNIT 192
+ ++V + VEGLAY +YW S + ++ +R I +++D+
Sbjct: 2294 RQVIVENVGSVEGLAYHRAWDTLYWTSSTTSSITRHTVDQTRPGAFDREAVITMSEDD-- 2351
Query: 193 QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
P + LD +FWT+W E +P I R + G N ++ST I PNGLT+D +
Sbjct: 2352 HPHVLALDEC--QNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEK 2409
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+YF+D L KI + DGS ++V
Sbjct: 2410 LYFSDGSLG----------------------------------KIERCEYDGSQRHVIVK 2435
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
L+L + + ++FW+DWG + G + + S + P
Sbjct: 2436 SGPGTFLSLAVYDN-----------YIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPM 2484
Query: 372 GL 373
G+
Sbjct: 2485 GI 2486
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ +V + + GL D+ +Y+ D L +IE C+ +G+ R V+ K G L
Sbjct: 2387 AQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGKIERCEYDGSQRHVIVKSG----PGTFL 2442
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ ++FW+DWG + G + + S + P G+
Sbjct: 2443 SLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGI 2486
>gi|297264010|ref|XP_001117994.2| PREDICTED: low-density lipoprotein receptor-related protein 1B
[Macaca mulatta]
Length = 4637
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 184/420 (43%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+GK DCP+G+DEG CD EC G CSN C P G +C+CP G L+
Sbjct: 1188 CLQPEKLCNGKKDCPDGSDEGDLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLNK 1245
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC EG+ L+ D +C +++ AF+I S R
Sbjct: 1246 DNKTCEIVDYCSNHLKCSQVCEQHKHTVKCSCYEGWKLDVDGESCTSVDPFEAFIIFSIR 1305
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1306 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAIE 1365
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 1366 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDP 1425
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 1426 RYGI--LFWTDWDANFPRIESASMSGAARKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAR 1483
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG+N ++ G Y +
Sbjct: 1484 SDAI------------YSALY----------------------DGTNMIEIIRGHEYLSH 1509
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 1510 PFAVS---LYGSE------VYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYHPS 1560
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 142/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +C+ K DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 2940 RCIPSGGLCNNKDDCGDGSDE-RNCHINECLSKKVSGCSQDCQDLPISYKCKCWPGFQLK 2998
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C +GY + DN + CK+++ FLI++
Sbjct: 2999 DDGKTCVDIDECSSGFPCSQQCVNTYGTYKCLCTDGYETQPDNPNGCKSLSDEEPFLILA 3058
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
+ H I L ++G D+R + I
Sbjct: 3059 DHHEIRKISTDGSNYTLLKQGLNNVIAIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDI 3118
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG +L + PR + LDP
Sbjct: 3119 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTILVSKRLKFPRDLSLDPR 3178
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +L+W D E P I R+GMDG+N+S +I TKI P LT+D R+Y+AD
Sbjct: 3179 AG--YLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLYWAD 3230
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 151/317 (47%), Gaps = 65/317 (20%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEG-------PGCDLAECKHKFGLCSNTCHPTPLGALCT 54
++CV+L+++C+G DCP+G DEG P C C++K + N+ C
Sbjct: 125 TNKCVHLSQLCNGVLDCPDGYDEGVHCQELLPNCQQLNCQYKCTMVGNS-------TRCY 177
Query: 55 CPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI--- 111
C G + D +C+D +EC G CSQ C NT GSY CSC EGY+++ DN +CKA
Sbjct: 178 CENGFEIKEDGRSCKDQDECAVYGTCSQTCRNTHGSYTCSCVEGYLMQSDNRSCKAKIEP 237
Query: 112 NHSAAFLIISNRHSI-------------------------------LVADLEEKGKDHRA 140
L+I+N +I ++ +E + ++
Sbjct: 238 TDRPPILLIANFETIEIFYLNGSKMATLSSVNGNEIHALDFIYNEDMICWIESRESSNQL 297
Query: 141 QDI---------------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
+ I ++ V+ +A DW+ ++Y++D +RI VC+ NG+ I
Sbjct: 298 KCIQITKAGGLTDEWTINILQSFHNVQQMAIDWLTRNLYFVDHVSDRIFVCNYNGSVCIT 357
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
L + P+ + +DP G LF+TD+G ++ER MDG NR+ II +K P L L
Sbjct: 358 LIDLELHNPKAIAVDPIAGK--LFFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALAL 415
Query: 246 DIATRRVYFADSKLDFI 262
D+ + VY+ D LD++
Sbjct: 416 DLVNKLVYWVDLYLDYV 432
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 140/323 (43%), Gaps = 61/323 (18%)
Query: 69 QDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
Q N C+ G CSQ+C T + + C C GY L+ + +C+ I +FL+ S I
Sbjct: 1871 QGSNSCQLNNGGCSQLCLPTSETTRTCMCTVGYYLQKNRMSCQGIE---SFLMYSVHEGI 1927
Query: 127 LVADLEEKGK----------------DHRAQ-------------------------DIVV 145
LE K D A+ DI+
Sbjct: 1928 RGIPLEPSDKMDALMPISGTSFAVGIDFHAENDTIYWTDMGFNKISRAKRDQTWKEDIIT 1987
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + + P G
Sbjct: 1988 NGLGRVEGIAIDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIAVHPEKGL 2047
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
LFWT+WG+ P I + +DGS + ++S I WPNG+++D ++Y+ D++ D I+
Sbjct: 2048 --LFWTEWGQMPCIGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERI 2105
Query: 266 SLEI---------KTNVNYSTIF---RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
LE +NV+ ++ +YW D ++ G N D + + +G
Sbjct: 2106 DLETGGHREVVLSGSNVDMFSVAVFGAYIYWSDRAHANGSVRRGHKN-DATETITMRTGL 2164
Query: 314 LYEALALDLENGMLYYSTLKCTR 336
+ + N + T C R
Sbjct: 2165 GVNLKEVKIFNRVREKGTNVCAR 2187
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 137/328 (41%), Gaps = 74/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSN--TCHPTPLGALCTCPP 57
+C+ + CD DC +G+DE GC +A C+ C + C+ C C P
Sbjct: 3811 KCIPMDLQCDRLDDCGDGSDE-QGCRIAPTEYTCEDNVNPCGDDANCNQIKTSVFCRCKP 3869
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G + C+D+NEC G CS C N +GSY C C++ + + N+TC A
Sbjct: 3870 GFQRNMKHRQCEDLNECLVFGTCSHQCINVEGSYKCVCDQNF--QERNNTCIAKGSEDQV 3927
Query: 118 LIISNRHSIL--------------VADLEEKGK-----DHRAQDIVV------------- 145
L I+N IL ++ +E + + +D+++
Sbjct: 3928 LYIANDTDILGFIYPFNYSGDHQQISHIEHNSRITGMDVYYQRDMIIWSTQFNPGGIFYK 3987
Query: 146 -----------SGLDLVE-----GLAYDWIGGHIYWLD-SRLN--------------RIE 174
SGL E +A DW+ G+IYW D SR++ I
Sbjct: 3988 RIHGREKRQTNSGLICPEFKRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSIN 4047
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V NG N L + +P + ++P G ++WT G++ IE MDG+ R ++
Sbjct: 4048 VGQLNGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVVGDHSHIEEAAMDGTLRRILVQ 4105
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D + R+Y+AD +L I
Sbjct: 4106 KNLQRPTGLAVDYFSERIYWADFELSII 4133
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 107/240 (44%), Gaps = 55/240 (22%)
Query: 77 PGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA-DLEE 133
PG CS +C +++ + C C G+ L D +CK + R I+ DL
Sbjct: 521 PGGCSHICLLSSSYKTRTCRCRTGFNLGSDGRSCKRPKNELFLFYGKGRPGIVRGMDLNT 580
Query: 134 KGKDH-----------RAQD------------------------------IVVSGLDLVE 152
K D RA D I+ LD VE
Sbjct: 581 KIADEYMIPIENLVNPRALDFHAETNYIYFADTTSFLIGRQKIDGTERETILKDDLDNVE 640
Query: 153 GLAYDWIGGHIYWL-DSRLNRIEVC--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
G+A DWIG ++YW D I V ++ +R L + ++ PRG+++DP G W++
Sbjct: 641 GIAVDWIGNNLYWTNDGHRKTINVARLEKASQSRKTLLEGEMSHPRGIVVDPING--WMY 698
Query: 210 WTDWGENP------RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
WTDW E+ RIE+ MDG NR +++K+ WPNGLTLD T +Y+ D+ D I+
Sbjct: 699 WTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTNTLYWCDAYYDHIE 758
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 17/131 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCT 335
+ R LY++D V +I N +GS L+ +L+ +A+A+D G L
Sbjct: 331 LTRNLYFVDH----VSDRIFVCNYNGSVCITLIDLELHNPKAIAVDPIAGKL-------- 378
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
F+TD+G ++ER MDG NR+ II +K P L LD+ + VY+ D LD++
Sbjct: 379 ---FFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVGVV 435
Query: 396 NYDGTGRQQVI 406
+Y G R +I
Sbjct: 436 DYQGKNRHAII 446
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G N ++ST I PNGLT+D ++YF+D L
Sbjct: 2365 ECQNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGK 2424
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 2425 IERCEYDGSQRHVIV 2439
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 139/311 (44%), Gaps = 41/311 (13%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS MC N S C+C L D TC + FL+ + R I D++
Sbjct: 1576 GPCSHMCLINHNRSAACACPHLMKLSSDKKTCYEMK---KFLLYARRSEIRGVDIDNPYF 1632
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ V +D V + +D +YW D + I+ NGT + +I RG
Sbjct: 1633 NFITA-FTVPDIDDVTVIDFDASEERLYWTDIKTQTIKRAFINGTGLETVISRDIQSIRG 1691
Query: 197 MMLDPSPGTRWLFW--TDWGENPRIERIGMDGSNRSTIIS--------------TKIYWP 240
+ +D +R L+W +++ E +I +DGS +++II K+YW
Sbjct: 1692 LAVDWV--SRNLYWISSEYDET-QINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWT 1748
Query: 241 NGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+G T+++A + ++SK+ F + K + +++Y + KLYWI GNG I + N
Sbjct: 1749 DGNTINMAN--MDGSNSKILFQNQKE-PVGLSIDY--VENKLYWI-SSGNGT---INRCN 1799
Query: 301 MDGSNASILVS--GQLYEALALDLENGMLYYSTLKCTRWLFWTDW-GENPRIERIGMDGS 357
+ G N ++ S +L +A AL + + L+++ + + G NP I R +
Sbjct: 1800 LGGGNLEVIESMKEELTKATALTIMDKKLWWADQNLAQLGTCSKRDGRNPTILR-----N 1854
Query: 358 NRSTIISTKIY 368
S ++ K+Y
Sbjct: 1855 KTSGVVHMKVY 1865
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 94/242 (38%), Gaps = 58/242 (23%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-----NRIEVCDENGTNR---IVLAKDNIT 192
+ ++V + VEGLAY +YW S + ++ +R I +++D+
Sbjct: 2299 RQVIVENVGSVEGLAYHRAWDTLYWTSSTTSSITRHTVDQTRPGAFDREAVITMSEDD-- 2356
Query: 193 QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
P + LD +FWT+W E +P I R + G N ++ST I PNGLT+D +
Sbjct: 2357 HPHVLALDEC--QNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEK 2414
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+YF+D L KI + DGS ++V
Sbjct: 2415 LYFSDGSLG----------------------------------KIERCEYDGSQRHVIVK 2440
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
L+L + + ++FW+DWG + G + + S + P
Sbjct: 2441 SGPGTFLSLAVYDN-----------YIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPM 2489
Query: 372 GL 373
G+
Sbjct: 2490 GI 2491
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 94/224 (41%), Gaps = 33/224 (14%)
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++D L+WTD + I+R ++G+ T+IS I GL +D +R +Y+ S
Sbjct: 1648 VIDFDASEERLYWTDI-KTQTIKRAFINGTGLETVISRDIQSIRGLAVDWVSRNLYWISS 1706
Query: 258 KLDFIDCKSLEIKTNVNYSTIFR--------------KLYWIDEGGNGVPLKIGKANMDG 303
+ D + ++ S I KLYW D GN I ANMDG
Sbjct: 1707 EYDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD--GN----TINMANMDG 1760
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
SN+ IL Q E + L ++ Y K L+W G N I R + G N I
Sbjct: 1761 SNSKILFQNQ-KEPVGLSID-----YVENK----LYWISSG-NGTINRCNLGGGNLEVIE 1809
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
S K L I +++++AD L + C+ GR IL
Sbjct: 1810 SMKEELTKATALTIMDKKLWWADQNLAQLGTCS-KRDGRNPTIL 1852
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ +V + + GL D+ +Y+ D L +IE C+ +G+ R V+ K G L
Sbjct: 2392 AQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGKIERCEYDGSQRHVIVKSG----PGTFL 2447
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ ++FW+DWG + G + + S + P G+
Sbjct: 2448 SLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGI 2491
>gi|426329704|ref|XP_004025876.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like,
partial [Gorilla gorilla gorilla]
Length = 732
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 152/298 (51%), Gaps = 47/298 (15%)
Query: 6 VNLTKVCDGKTDCPNGADE--GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
V+ KVCD + DC + +DE C L EC H G CS+ C +G CTCP G L
Sbjct: 80 VDGGKVCDVQRDCRDWSDELLKVWCGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL- 138
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D TC D++EC+ P CSQ+C N KG + C C GY ++ CKA + LI +NR
Sbjct: 139 DQKTCGDIDECKDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAAGKSPSLIFTNR 198
Query: 124 HSILVADL-----------------------------------------EEKGKDHRAQD 142
H + DL +K D + Q+
Sbjct: 199 HEVRRIDLVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPKEQE 258
Query: 143 IVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+++ L EGLA DW+ HIYW DS I V +G R L N+++PR + +DP
Sbjct: 259 VLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRRTLFSRNLSEPRAIAVDP 318
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++W+DWG+ +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 319 LRG--FMYWSDWGDQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 374
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL--AKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D +G NR +L + D ++ P G+
Sbjct: 345 QTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKMLISSTDFLSHPFGIA 404
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 405 VFEDK----VFWTD 414
>gi|13928141|dbj|BAB46965.1| apolipoprotein E receptor 2 [Mus musculus]
Length = 996
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/298 (35%), Positives = 154/298 (51%), Gaps = 46/298 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CV+ KVCD + DC + +DE C L EC H G CS+ C +G CTCP G L
Sbjct: 344 CVDGGKVCDDQRDCRDWSDEPQKVCGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL- 402
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D TC D++EC+ P CSQ+C N KG + C C+ GY ++ CKA+ + LI +NR
Sbjct: 403 DQKTCGDIDECQDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAVAGKSPSLIFTNR 462
Query: 124 HSILVADLEEKG--------KDHRAQDIVVS----------------------------- 146
H + DL ++ K+ A D+ V+
Sbjct: 463 HEVRRIDLVKRDYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAHMDKASIPDEQV 522
Query: 147 -----GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
L EGLA DW+ HIYW DS I V +G R L +++PR + +DP
Sbjct: 523 VLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATTDGRRRCTLFSRELSEPRAIAVDP 582
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++W+DWG +IE+ G++G++R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 583 LRG--FMYWSDWGFQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 638
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 176/427 (41%), Gaps = 97/427 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT---CPPGEIL 61
CV K C+ + DCP+G+DE GC L +TC P C C G +
Sbjct: 303 CVLAIKRCNQERDCPDGSDEA-GC----------LQESTCE-GPRRFQCKSGECVDGGKV 350
Query: 62 SNDSVTCQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110
+D C+D +NEC G CS +CT+ K + C+C G+ L D TC
Sbjct: 351 CDDQRDCRDWSDEPQKVCGLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGD 409
Query: 111 INH----SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
I+ A I N + + D + V G + I + +
Sbjct: 410 IDECQDPDACSQICVNYKGYFKCECHPGYE----MDTLTKNCKAVAGKSPSLIFTNRH-- 463
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226
+ RI++ + + I + K+ + LD T ++W D +I MD
Sbjct: 464 --EVRRIDLVKRDYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAHMDK 514
Query: 227 SN----RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
++ + +I +++ P GL +D + + +
Sbjct: 515 ASIPDEQVVLIDEQLHSPEGLAVDW------------------------------VHKHI 544
Query: 283 YWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFW 340
YW D G I A DG L S +L E A+A+D G +Y W
Sbjct: 545 YWTDSGNK----TISVATTDGRRRCTLFSRELSEPRAIAVDPLRGFMY-----------W 589
Query: 341 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
+DWG +IE+ G++G++R T++S I WPNG+TLD+ ++R+Y+ DSKL + +++G
Sbjct: 590 SDWGFQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFNGG 649
Query: 401 GRQQVIL 407
R+ +I
Sbjct: 650 NRKMLIF 656
>gi|397504598|ref|XP_003822873.1| PREDICTED: low-density lipoprotein receptor-related protein 1B [Pan
paniscus]
Length = 4636
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 184/420 (43%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+GK DCP+G+DEG CD EC G CSN C P G +C+CP G L+
Sbjct: 1187 CLQPEKLCNGKKDCPDGSDEGDLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLNK 1244
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC EG+ L+ D +C +++ AF+I S R
Sbjct: 1245 DNKTCEIVDYCSNHLKCSQVCEQHKHTVKCSCYEGWKLDVDGESCTSVDPFEAFIIFSIR 1304
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1305 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAIE 1364
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 1365 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDP 1424
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 1425 RYGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAR 1482
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG+N ++ G Y +
Sbjct: 1483 SDAI------------YSALY----------------------DGTNMIEIIRGHEYLSH 1508
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 1509 PFAVS---LYGSE------VYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYHPS 1559
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 143/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +CD K DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 2939 RCIPSGGLCDNKDDCGDGSDE-RNCHINECLSKKVSGCSQDCQDLPVSYKCKCWPGFQLK 2997
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D +EC CSQ C NT G+Y C C +GY ++ DN + CK+++ FLI++
Sbjct: 2998 DDGKTCVDTDECSSGFPCSQQCINTYGTYKCLCTDGYEIQPDNPNGCKSLSGEEPFLILA 3057
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
+ H I L ++G D+R + I
Sbjct: 3058 DHHEIRKISTDGSNYTLLKQGLNNVIAIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDI 3117
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG +L + PR + LDP
Sbjct: 3118 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTILVSKRLKFPRDLSLDPR 3177
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +L+W D E P I R+GMDG+N+S +I TKI P LT+D RR+Y+AD
Sbjct: 3178 AG--YLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNRRLYWAD 3229
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 150/312 (48%), Gaps = 55/312 (17%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCD--LAECKHKFGLCSNTCHPTPLGALCTCPPGE 59
++CV+L+++C+G DCP+G DEG C L+ C+ C C C C G
Sbjct: 124 TNKCVHLSQLCNGVLDCPDGYDEGVHCQELLSNCQQLN--CQYKCTMVRNSTRCYCEDGF 181
Query: 60 ILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI---NHSAA 116
++ D +C+D +EC G CSQ C NT GSY CSC EGY+++ DN +CKA
Sbjct: 182 EITEDGRSCKDQDECAVYGTCSQTCRNTHGSYTCSCVEGYLMQPDNRSCKAKIEPTDRPP 241
Query: 117 FLIISNRHSI-------------------------------LVADLEEKGKDHRAQDI-- 143
L+I+N +I ++ +E + ++ + I
Sbjct: 242 ILLIANFETIEVFYLNGSKMATLSSVNGNEIHTLDFIYNEDMICWIESRESSNQLKCIQI 301
Query: 144 -------------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ V+ +A DW+ ++Y++D +RI VC+ NG+ + L
Sbjct: 302 TKAGGLTDEWTINILQSFHNVQQMAIDWLTRNLYFVDHVSDRIFVCNSNGSVCVTLIDLE 361
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P+ + +DP G LF+TD+G ++ER MDG NR+ II +K P L LD+ +
Sbjct: 362 LHNPKAIAVDPIAGK--LFFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNK 419
Query: 251 RVYFADSKLDFI 262
VY+ D LD++
Sbjct: 420 LVYWVDLYLDYV 431
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 137/323 (42%), Gaps = 61/323 (18%)
Query: 69 QDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
Q N C+ G CSQ+C T + + C C GY L+ + +C+ I +FL+ S I
Sbjct: 1870 QGSNSCQLNNGGCSQLCLPTSETTRTCMCTVGYYLQKNRMSCQGIE---SFLMYSVHEGI 1926
Query: 127 LVADLEEKGK----------------DHRAQ-------------------------DIVV 145
LE K D A+ DI+
Sbjct: 1927 RGIPLEPSDKMDALMPISGTSFAVGIDFHAENDTIYWTDMGFNKISRAKRDQTWKEDIIT 1986
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + + P G
Sbjct: 1987 NGLGRVEGIAVDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIAVHPEKGL 2046
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
LFWT+WG+ P I + +DGS + ++S I WPNG+++D ++Y+ D++ D I+
Sbjct: 2047 --LFWTEWGQMPCIGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERI 2104
Query: 266 SLEIKTN------------VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
LE N + + +YW D ++ G N D + + +G
Sbjct: 2105 DLETGGNREMVLSGSNVDMFSVAVFGAYIYWSDRAHANGSVRRGHKN-DATETITMRTGL 2163
Query: 314 LYEALALDLENGMLYYSTLKCTR 336
+ + N + T C R
Sbjct: 2164 GVNLKEVKIFNRVREKGTNVCAR 2186
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 107/240 (44%), Gaps = 55/240 (22%)
Query: 77 PGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA-DLEE 133
PG CS +C +++ + C C G+ L D +CK + R I+ DL
Sbjct: 520 PGGCSHICLLSSSYKTRTCRCRTGFNLGSDGRSCKRPKNELFLFYGKGRPGIVRGMDLNT 579
Query: 134 KGKDH-----------RAQD------------------------------IVVSGLDLVE 152
K D RA D I+ LD VE
Sbjct: 580 KIADEYMIPIENLVNPRALDFHAETNYIYFADTTSFLIGRQKIDGTERETILKDDLDNVE 639
Query: 153 GLAYDWIGGHIYWL-DSRLNRIEVC--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
G+A DWIG ++YW D I V ++ +R L + ++ PRG+++DP G W++
Sbjct: 640 GIAVDWIGNNLYWTNDGHTKTINVARLEKASQSRKTLLEGEMSHPRGIVVDPVNG--WMY 697
Query: 210 WTDWGENP------RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
WTDW E+ RIE+ MDG NR +++K+ WPNGLTLD T +Y+ D+ D I+
Sbjct: 698 WTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTNTLYWCDAYYDHIE 757
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 138/328 (42%), Gaps = 74/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSNT--CHPTPLGALCTCPP 57
+C+ + CD DC +G+DE GC +A C+ C + C+ C C P
Sbjct: 3810 KCIPMDLQCDRLDDCGDGSDE-QGCRIAPTEYTCEDNVNPCGDDAYCNQIKTSVSCRCKP 3868
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G + + C+D+NEC G CS C N +GSY C C++ + + N+TC A
Sbjct: 3869 GFQRNMKNRQCEDLNECLVFGTCSHQCINVEGSYKCVCDQNF--QERNNTCIAEGSEDQV 3926
Query: 118 LIISNRHSIL--------------VADLEEKGK-----DHRAQDIVV------------- 145
L I+N IL ++ +E + + +D+++
Sbjct: 3927 LYIANDTDILGFIYPFNYSGDHQQISHIEHNSRITGMDVYYQRDMIIWSTQFNPGGIFYK 3986
Query: 146 -----------SGLDLVE-----GLAYDWIGGHIYWLD-SRLN--------------RIE 174
SGL E +A DW+ G+IYW D SR++ I
Sbjct: 3987 RIHDREKRQANSGLICPEFKRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSIN 4046
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V NG N L + +P + ++P G ++WT G++ IE MDG+ R ++
Sbjct: 4047 VGQLNGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVVGDHSHIEEAAMDGTLRRILVQ 4104
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D + R+Y+AD +L I
Sbjct: 4105 KNLQRPTGLAVDYFSERIYWADFELSII 4132
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 67/131 (51%), Gaps = 17/131 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCT 335
+ R LY++D V +I N +GS L+ +L+ +A+A+D G L
Sbjct: 330 LTRNLYFVDH----VSDRIFVCNSNGSVCVTLIDLELHNPKAIAVDPIAGKL-------- 377
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
F+TD+G ++ER MDG NR+ II +K P L LD+ + VY+ D LD++
Sbjct: 378 ---FFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVGVV 434
Query: 396 NYDGTGRQQVI 406
+Y G R VI
Sbjct: 435 DYQGKNRHTVI 445
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G N ++ST I PNGLT+D ++YF+D L
Sbjct: 2364 ECQNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGK 2423
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 2424 IERCEYDGSQRHVIV 2438
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 138/310 (44%), Gaps = 39/310 (12%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS MC N S C+C L D TC + FL+ + R I D++
Sbjct: 1575 GPCSHMCLINHNRSAACACPHLMKLSSDKKTCYEMK---KFLLYARRSEIRGVDIDNPYF 1631
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ V +D V + +D +YW D + I+ NGT + +I RG
Sbjct: 1632 NFITA-FTVPDIDDVTVIDFDASEERLYWTDIKTQTIKRAFINGTGLETVISRDIQSIRG 1690
Query: 197 MMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIIS--------------TKIYWPN 241
+ +D +R L+W + + +I +DGS +++II K+YW +
Sbjct: 1691 LAVDWV--SRNLYWISSEFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD 1748
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
G T+++A + ++SK+ F + K + +++Y + KLYWI GNG I + N+
Sbjct: 1749 GNTINMAN--MDGSNSKILFQNQKE-PVGLSIDY--VENKLYWI-SSGNGT---INRCNL 1799
Query: 302 DGSNASILVS--GQLYEALALDLENGMLYYSTLKCTRWLFWTDW-GENPRIERIGMDGSN 358
DG N ++ S +L +A AL + + L+++ + + G NP I R +
Sbjct: 1800 DGGNLEVIESMKEELTKATALTIMDKKLWWADQNLAQLGTCSKRDGRNPTILR-----NK 1854
Query: 359 RSTIISTKIY 368
S ++ K+Y
Sbjct: 1855 TSGVVHMKVY 1864
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 95/224 (42%), Gaps = 33/224 (14%)
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++D L+WTD + I+R ++G+ T+IS I GL +D +R +Y+ S
Sbjct: 1647 VIDFDASEERLYWTDI-KTQTIKRAFINGTGLETVISRDIQSIRGLAVDWVSRNLYWISS 1705
Query: 258 KLDFIDCKSLEIKTNVNYSTIFR--------------KLYWIDEGGNGVPLKIGKANMDG 303
+ D + ++ S I KLYW D GN I ANMDG
Sbjct: 1706 EFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD--GN----TINMANMDG 1759
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
SN+ IL Q E + L ++ Y K L+W G N I R +DG N I
Sbjct: 1760 SNSKILFQNQ-KEPVGLSID-----YVENK----LYWISSG-NGTINRCNLDGGNLEVIE 1808
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
S K L I +++++AD L + C+ GR IL
Sbjct: 1809 SMKEELTKATALTIMDKKLWWADQNLAQLGTCS-KRDGRNPTIL 1851
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 94/242 (38%), Gaps = 58/242 (23%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-----NRIEVCDENGTNR---IVLAKDNIT 192
+ ++V + VEGLAY +YW S + ++ +R I +++D+
Sbjct: 2298 RQVIVENVGSVEGLAYHRAWDTLYWTSSTTSSITRHTVDQTRPGAFDREAVITMSEDD-- 2355
Query: 193 QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
P + LD +FWT+W E +P I R + G N ++ST I PNGLT+D +
Sbjct: 2356 HPHVLALDEC--QNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEK 2413
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+YF+D L KI + DGS ++V
Sbjct: 2414 LYFSDGSLG----------------------------------KIERCEYDGSQRHVIVK 2439
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
L+L + + ++FW+DWG + G + + S + P
Sbjct: 2440 SGPGTFLSLAVYDN-----------YIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPM 2488
Query: 372 GL 373
G+
Sbjct: 2489 GI 2490
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ +V + + GL D+ +Y+ D L +IE C+ +G+ R V+ K G L
Sbjct: 2391 AQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGKIERCEYDGSQRHVIVKSG----PGTFL 2446
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ ++FW+DWG + G + + S + P G+
Sbjct: 2447 SLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGI 2490
>gi|114581079|ref|XP_001156822.1| PREDICTED: low-density lipoprotein receptor-related protein 1B
isoform 1 [Pan troglodytes]
Length = 4636
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 184/420 (43%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+GK DCP+G+DEG CD EC G CSN C P G +C+CP G L+
Sbjct: 1187 CLQPEKLCNGKKDCPDGSDEGDLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLNK 1244
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC EG+ L+ D +C +++ AF+I S R
Sbjct: 1245 DNKTCEIVDYCSNHLKCSQVCEQHKHTVKCSCYEGWKLDVDGESCTSVDPFEAFIIFSIR 1304
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1305 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAIE 1364
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 1365 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDP 1424
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 1425 RYGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAR 1482
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG+N ++ G Y +
Sbjct: 1483 SDAI------------YSALY----------------------DGTNMIEIIRGHEYLSH 1508
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 1509 PFAVS---LYGSE------VYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYHPS 1559
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 144/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +CD K DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 2939 RCIPSGGLCDNKDDCGDGSDE-RNCHINECLSKKVSGCSQDCQDLPVSYKCKCWPGFQLK 2997
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C +GY ++ DN + CK+++ FLI++
Sbjct: 2998 DDGKTCVDIDECSSGFPCSQQCINTYGTYKCLCTDGYEIQPDNPNGCKSLSGEEPFLILA 3057
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
+ H I L ++G D+R + I
Sbjct: 3058 DHHEIRKISTDGSNYTLLKQGLNNVIAIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDI 3117
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG +L + PR + LDP
Sbjct: 3118 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTILVSKRLKFPRDLSLDPR 3177
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +L+W D E P I R+GMDG+N+S +I TKI P LT+D RR+Y+AD
Sbjct: 3178 AG--YLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNRRLYWAD 3229
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 150/312 (48%), Gaps = 55/312 (17%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCD--LAECKHKFGLCSNTCHPTPLGALCTCPPGE 59
++CV+L+++C+G DCP+G DEG C L+ C+ C C C C G
Sbjct: 124 TNKCVHLSQLCNGVLDCPDGYDEGVHCQELLSNCQQLN--CQYKCTMVRNSTRCYCEDGF 181
Query: 60 ILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI---NHSAA 116
++ D +C+D +EC G CSQ C NT GSY CSC EGY+++ DN +CKA
Sbjct: 182 EITEDGRSCKDQDECAVYGTCSQTCRNTHGSYTCSCVEGYLMQPDNRSCKAKIEPTDRPP 241
Query: 117 FLIISNRHSI-------------------------------LVADLEEKGKDHRAQDI-- 143
L+I+N +I ++ +E + ++ + I
Sbjct: 242 ILLIANFETIEVFYLNGSKMATLSSVNGNEIHTLDFIYNEDMICWIESRESSNQLKCIQI 301
Query: 144 -------------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ V+ +A DW+ ++Y++D +RI VC+ NG+ + L
Sbjct: 302 TKAGGLTDEWTINILQSFHNVQQMAIDWLTRNLYFVDHVSDRIFVCNSNGSVCVTLIDLE 361
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P+ + +DP G LF+TD+G ++ER MDG NR+ II +K P L LD+ +
Sbjct: 362 LHNPKAIAVDPIAGK--LFFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNK 419
Query: 251 RVYFADSKLDFI 262
VY+ D LD++
Sbjct: 420 LVYWVDLYLDYV 431
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 137/323 (42%), Gaps = 61/323 (18%)
Query: 69 QDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
Q N C+ G CSQ+C T + + C C GY L+ + +C+ I +FL+ S I
Sbjct: 1870 QGSNSCQLNNGGCSQLCLPTSETTRTCMCTVGYYLQKNRMSCQGIE---SFLMYSVHEGI 1926
Query: 127 LVADLEEKGK----------------DHRAQ-------------------------DIVV 145
LE K D A+ DI+
Sbjct: 1927 RGIPLEPSDKMDALMPISGTSFAVGIDFHAENDTIYWTDMGFNKISRAKRDQTWKEDIIT 1986
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + + P G
Sbjct: 1987 NGLGRVEGIAVDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIAVHPEKGL 2046
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
LFWT+WG+ P I + +DGS + ++S I WPNG+++D ++Y+ D++ D I+
Sbjct: 2047 --LFWTEWGQMPCIGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERI 2104
Query: 266 SLEIKTN------------VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
LE N + + +YW D ++ G N D + + +G
Sbjct: 2105 DLETGGNREMVLSGSNVDMFSVAVFGAYIYWSDRAHANGSVRRGHKN-DATETITMRTGL 2163
Query: 314 LYEALALDLENGMLYYSTLKCTR 336
+ + N + T C R
Sbjct: 2164 GVNLKEVKIFNRVREKGTNVCAR 2186
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 107/240 (44%), Gaps = 55/240 (22%)
Query: 77 PGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA-DLEE 133
PG CS +C +++ + C C G+ L D +CK + R I+ DL
Sbjct: 520 PGGCSHICLLSSSYKTRTCRCRTGFNLGSDGRSCKRPKNELFLFYGKGRPGIVRGMDLNT 579
Query: 134 KGKDH-----------RAQD------------------------------IVVSGLDLVE 152
K D RA D I+ LD VE
Sbjct: 580 KIADEYMIPIENLVNPRALDFHAETNYIYFADTTSFLIGRQKIDGTERETILKDDLDNVE 639
Query: 153 GLAYDWIGGHIYWL-DSRLNRIEVC--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
G+A DWIG ++YW D I V ++ +R L + ++ PRG+++DP G W++
Sbjct: 640 GIAVDWIGNNLYWTNDGHTKTINVARLEKASQSRKTLLEGEMSHPRGIVVDPVNG--WMY 697
Query: 210 WTDWGENP------RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
WTDW E+ RIE+ MDG NR +++K+ WPNGLTLD T +Y+ D+ D I+
Sbjct: 698 WTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTNTLYWCDAYYDHIE 757
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 137/328 (41%), Gaps = 74/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSNT--CHPTPLGALCTCPP 57
+C+ + CD DC +G+DE GC +A C+ C + C+ C C P
Sbjct: 3810 KCIPMDLQCDRLDDCGDGSDE-QGCRIAPTEYTCEDNVNPCGDDAYCNQIKTSVFCRCKP 3868
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G + + C+D+NEC G CS C N +GSY C C++ + + N+TC A
Sbjct: 3869 GFQRNMKNRQCEDLNECLVFGTCSHQCINVEGSYKCVCDQNF--QERNNTCIAEGSEDQV 3926
Query: 118 LIISNRHSIL--------------VADLEEKGK-----DHRAQDIVV------------- 145
L I+N IL ++ +E + + +D+++
Sbjct: 3927 LYIANDTDILGFIYPFNYSGDHQQISHIEHNSRITGMDVYYQRDMIIWSTQFNPGGIFYK 3986
Query: 146 -----------SGLDLVE-----GLAYDWIGGHIYWLD-SRLN--------------RIE 174
SGL E +A DW+ G+IYW D SR++ I
Sbjct: 3987 RIHDREKRQANSGLICPEFKRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSIN 4046
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V NG N L + +P + ++P G ++WT G++ IE DG+ R ++
Sbjct: 4047 VGQLNGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVVGDHSHIEEAARDGTLRRILVQ 4104
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D + R+Y+AD +L I
Sbjct: 4105 KNLQRPTGLAVDYFSERIYWADFELSII 4132
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 67/131 (51%), Gaps = 17/131 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCT 335
+ R LY++D V +I N +GS L+ +L+ +A+A+D G L
Sbjct: 330 LTRNLYFVDH----VSDRIFVCNSNGSVCVTLIDLELHNPKAIAVDPIAGKL-------- 377
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
F+TD+G ++ER MDG NR+ II +K P L LD+ + VY+ D LD++
Sbjct: 378 ---FFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVGVV 434
Query: 396 NYDGTGRQQVI 406
+Y G R VI
Sbjct: 435 DYQGKNRHTVI 445
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G N ++ST I PNGLT+D ++YF+D L
Sbjct: 2364 ECQNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGK 2423
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 2424 IERCEYDGSQRHVIV 2438
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 138/310 (44%), Gaps = 39/310 (12%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS MC N S C+C L D TC + FL+ + R I D++
Sbjct: 1575 GPCSHMCLINHNRSAACACPHLMKLSSDKKTCYEMK---KFLLYARRSEIRGVDIDNPYF 1631
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ V +D V + +D +YW D + I+ NGT + +I RG
Sbjct: 1632 NFITA-FTVPDIDDVTVIDFDASEERLYWTDIKTQTIKRAFINGTGLETVISRDIQSIRG 1690
Query: 197 MMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIIS--------------TKIYWPN 241
+ +D +R L+W + + +I +DGS +++II K+YW +
Sbjct: 1691 LAVDWV--SRNLYWISSEFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD 1748
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
G T+++A + ++SK+ F + K + +++Y + KLYWI GNG I + N+
Sbjct: 1749 GNTINMAN--MDGSNSKILFQNQKE-PVGLSIDY--VENKLYWI-SSGNGT---INRCNL 1799
Query: 302 DGSNASILVS--GQLYEALALDLENGMLYYSTLKCTRWLFWTDW-GENPRIERIGMDGSN 358
DG N ++ S +L +A AL + + L+++ + + G NP I R +
Sbjct: 1800 DGGNLEVIESMKEELTKATALTIMDKKLWWADQNLAQLGTCSKRDGRNPTILR-----NK 1854
Query: 359 RSTIISTKIY 368
S ++ K+Y
Sbjct: 1855 TSGVVHMKVY 1864
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 95/224 (42%), Gaps = 33/224 (14%)
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++D L+WTD + I+R ++G+ T+IS I GL +D +R +Y+ S
Sbjct: 1647 VIDFDASEERLYWTDI-KTQTIKRAFINGTGLETVISRDIQSIRGLAVDWVSRNLYWISS 1705
Query: 258 KLDFIDCKSLEIKTNVNYSTIFR--------------KLYWIDEGGNGVPLKIGKANMDG 303
+ D + ++ S I KLYW D GN I ANMDG
Sbjct: 1706 EFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD--GN----TINMANMDG 1759
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
SN+ IL Q E + L ++ Y K L+W G N I R +DG N I
Sbjct: 1760 SNSKILFQNQ-KEPVGLSID-----YVENK----LYWISSG-NGTINRCNLDGGNLEVIE 1808
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
S K L I +++++AD L + C+ GR IL
Sbjct: 1809 SMKEELTKATALTIMDKKLWWADQNLAQLGTCS-KRDGRNPTIL 1851
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 94/242 (38%), Gaps = 58/242 (23%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-----NRIEVCDENGTNR---IVLAKDNIT 192
+ ++V + VEGLAY +YW S + ++ +R I +++D+
Sbjct: 2298 RQVIVENVGSVEGLAYHRAWDTLYWTSSTTSSITRHTVDQTRPGAFDREAVITMSEDD-- 2355
Query: 193 QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
P + LD +FWT+W E +P I R + G N ++ST I PNGLT+D +
Sbjct: 2356 HPHVLALDEC--QNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEK 2413
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+YF+D L KI + DGS ++V
Sbjct: 2414 LYFSDGSLG----------------------------------KIERCEYDGSQRHVIVK 2439
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
L+L + + ++FW+DWG + G + + S + P
Sbjct: 2440 SGPGTFLSLAVYDN-----------YIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPM 2488
Query: 372 GL 373
G+
Sbjct: 2489 GI 2490
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ +V + + GL D+ +Y+ D L +IE C+ +G+ R V+ K G L
Sbjct: 2391 AQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGKIERCEYDGSQRHVIVKSG----PGTFL 2446
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ ++FW+DWG + G + + S + P G+
Sbjct: 2447 SLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGI 2490
>gi|46577126|sp|Q9JI18.1|LRP1B_MOUSE RecName: Full=Low-density lipoprotein receptor-related protein 1B;
Short=LRP-1B; AltName: Full=Low-density lipoprotein
receptor-related protein-deleted in tumor; Short=LRP-DIT;
Flags: Precursor
gi|8926243|gb|AAF81758.1|AF270884_1 low density lipoprotein receptor related protein LRP1B/LRP-DIT [Mus
musculus]
Length = 4599
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 180/420 (42%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+G+ DCP+G+DEG CD EC G CSN C P G +C+CP G L
Sbjct: 1150 CLQPEKLCNGRKDCPDGSDEGDLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPEGHQLKK 1207
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K CSC EG+ L D +C +++ AF+I S R
Sbjct: 1208 DNRTCEIVDYCASHLRCSQVCEQQKHMVKCSCYEGWALGTDGESCTSVDSFEAFIIFSIR 1267
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1268 HEIRRIDLHKGDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAIE 1327
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 1328 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVSKLDGSLRATLIAGAMEHPRAIALDP 1387
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D RR+ + D++
Sbjct: 1388 RYGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFERRIVWTDAR 1445
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS + DG+N ++ G Y +
Sbjct: 1446 SDAI------------YSAFY----------------------DGTNMIEIIRGHEYLSH 1471
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 1472 PFAVS---LYGSE------VYWTDWRTNTLAKANKWTGQNVSVIQKTSAQPFDLQIYHPS 1522
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 148/314 (47%), Gaps = 65/314 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-------PGCDLAECKHKFGLCSNTCHPTPLGALCTCPP 57
CV+L+K+C+G DCP+G DEG P C C+ K + N C C
Sbjct: 90 CVHLSKLCNGVVDCPDGFDEGGHCQELLPSCQQLNCQFKCAMVRN-------ATRCYCED 142
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH---S 114
G ++ D +C+D +EC G CSQ C NT GSY CSC EGY+++ DN +CK +
Sbjct: 143 GFEVAEDGRSCKDQDECSIYGICSQTCKNTYGSYACSCVEGYIMQSDNRSCKVKHEPTDK 202
Query: 115 AAFLIIS---------------------NRHSILVADL------------EEKGKDHRAQ 141
A L+IS NR+ I D E +
Sbjct: 203 APMLLISSLETIELFYINGSKMTTLSSANRNEIHTLDFIYSEEMICWIESRESSNQLKCG 262
Query: 142 DIVVSG-------------LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK 188
I +G VE +A+DW+ +IY++D +RI VC+ NG+ + L +
Sbjct: 263 QITKAGRLTDQRIINSLQSFQNVEQMAFDWLTRNIYFVDHVSDRIFVCNFNGSVCVTLIE 322
Query: 189 DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248
+ P+ + DP G LF+TD+G P+IER +DG NR+ I+ +K P+ L LD+
Sbjct: 323 SELHNPKAIAADPIAGK--LFFTDYGNVPKIERCDLDGMNRTRIVYSKAEQPSALALDLV 380
Query: 249 TRRVYFADSKLDFI 262
R VY+ D LD++
Sbjct: 381 NRLVYWVDLYLDYV 394
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 142/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +CD + DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 2902 RCIPSDGLCDIRDDCGDGSDE-TNCHINECLSKKISGCSQDCQDLPVSYKCKCWPGFQLK 2960
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C EGY + DN + C++++ FLI++
Sbjct: 2961 DDGKTCVDIDECSSGFPCSQQCINTYGTYKCHCAEGYETQPDNPNGCRSLSDEEPFLILA 3020
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
++H I L ++G D+R + I
Sbjct: 3021 DQHEIRKISTDGSNYTLLKQGLNNVIALDFDYREEFIYWIDSSRPNGSRINRMCLNGSDI 3080
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG VL + PR + LDP
Sbjct: 3081 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTVLVSKRLKFPRDLSLDPR 3140
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G L+W D E P I R+GMDG+N+S +I TKI P LT+D R+Y+AD
Sbjct: 3141 AGN--LYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLYWAD 3192
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 128/289 (44%), Gaps = 64/289 (22%)
Query: 69 QDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
Q N C+ G CSQ+C T + + C C GY L+ + +C+ I +FL+ S I
Sbjct: 1833 QGSNSCQVNNGGCSQLCLPTSETTRTCMCTVGYYLQKNRMSCQGIE---SFLMYSVHEGI 1889
Query: 127 LVADLEEKGK----------------DHRAQ-------------------------DIVV 145
LE + K D A+ D+V
Sbjct: 1890 RGIPLEPRDKVDALMPISGAAFAVGIDFHAENDTIYWTDMGLNKISRAKRDQTWKEDVVT 1949
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + + P G
Sbjct: 1950 NGLGRVEGIAVDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIAVHPEKG- 2008
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+LFWT+WG+ P I + +DGS + I+S I WPNG+++D ++Y+ D++ D I+
Sbjct: 2009 -FLFWTEWGQVPCIGKARLDGSEKVMIVSVGITWPNGISIDYEENKLYWCDARSDKIE-- 2065
Query: 266 SLEIKTNVNYSTIFRK--------------LYWIDEGGNGVPLKIGKAN 300
+++ T N + +YW D ++ G N
Sbjct: 2066 RIDLDTGANREVLLSGSNVDLFSVAVFGAYIYWSDRAHANGSVRRGHKN 2114
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 88/158 (55%), Gaps = 13/158 (8%)
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL-DSRLNRI 173
A ++ ++ S L+ + G + + I+ LD VEG+A DWIG ++YW D I
Sbjct: 567 ANYIYFADTTSFLIGRQKIDGTER--ETILKDDLDNVEGIAVDWIGNNLYWTNDGHRKTI 624
Query: 174 EVC--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP------RIERIGMD 225
V ++ +R L + ++ PR +++DP G W++WTDW E+ RIE+ MD
Sbjct: 625 NVARLEKASQSRKTLLEGGMSHPRAIVVDPVNG--WMYWTDWKEDKIDDSVGRIEKAWMD 682
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G NR +++K+ WPNGLTLD T +Y+ D+ D I+
Sbjct: 683 GVNRQVFVTSKMLWPNGLTLDFHTSTLYWCDAYYDHIE 720
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 131/330 (39%), Gaps = 80/330 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNT---------CHPTPLGALCTC 55
C+ + CD DC +G+DE GC +H C N C+ C C
Sbjct: 3774 CIPMELQCDSLDDCGDGSDE-QGCLKTPIEH---TCENNGNPCGDDAYCNQIKTSVFCRC 3829
Query: 56 PPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA 115
PG + C D+NEC G CS C NT+GSY C C++ + + N++C A
Sbjct: 3830 KPGFQRNMKGRECADLNECLLFGICSHHCLNTRGSYKCVCDQNF--QEKNNSCIAKGSED 3887
Query: 116 AFLIISNRHSIL--------------VADLEEKGK------------------------- 136
L I+N IL ++ +E +
Sbjct: 3888 QALYIANDTDILGFVYPFNYSGGHQQISHVEHNSRITGMDVHYQRNVIVWSTQFNPGGIF 3947
Query: 137 ----DHRAQDIVVSGLDLVE-----GLAYDWIGGHIYWLD-SRLN--------------R 172
D R + SGL E +A DW+ G++YW D SR++
Sbjct: 3948 YKMIDAREKRQANSGLICPEFKRPRDIAVDWVAGNVYWTDHSRMHWFSYYTTHWTSLRYS 4007
Query: 173 IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI 232
I V NG N L + +P + ++P G ++WT G++ IE MDG+ R +
Sbjct: 4008 INVGQLNGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVIGDHSHIEEAAMDGTLRRVL 4065
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ + P GLT+D R+Y+AD +L I
Sbjct: 4066 VQKNLQRPTGLTVDHFGERIYWADFELSII 4095
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 127/339 (37%), Gaps = 99/339 (29%)
Query: 77 PGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK 134
PG CS +C +++ + C C G+ + D +CK + R I
Sbjct: 483 PGGCSHICLLSSSYKTRTCRCRTGFNMGSDGRSCKRPKNELFLFYGKGRPGI-------- 534
Query: 135 GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
V G+DL +A + ++ +N+ P
Sbjct: 535 ----------VRGMDLNTKIA--------------------------DECMIPIENLVNP 558
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
R LD ++++ D + I R +DG+ R TI+ + G+ +D
Sbjct: 559 RA--LDFHAEANYIYFAD-TTSFLIGRQKIDGTERETILKDDLDNVEGIAVDW------- 608
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
I LYW ++G + + + + L+ G +
Sbjct: 609 -----------------------IGNNLYWTNDGHRKT-INVARLEKASQSRKTLLEGGM 644
Query: 315 YE--ALALDLENGMLYYSTLKCTRWLFWTDWGENP------RIERIGMDGSNRSTIISTK 366
A+ +D NG W++WTDW E+ RIE+ MDG NR +++K
Sbjct: 645 SHPRAIVVDPVNG-----------WMYWTDWKEDKIDDSVGRIEKAWMDGVNRQVFVTSK 693
Query: 367 IYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+ WPNGLTLD T +Y+ D+ D I+ +GT R+ V
Sbjct: 694 MLWPNGLTLDFHTSTLYWCDAYYDHIEKVFLNGTHRKVV 732
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G N ++ST I PNGLT+D ++YF+D L
Sbjct: 2327 ECQNLMFWTNWNEQHPSIMRATLTGKNAHVVVSTDILTPNGLTIDHRAEKLYFSDGSLGK 2386
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 2387 IERCEYDGSQRHVIV 2401
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 128/336 (38%), Gaps = 59/336 (17%)
Query: 75 EQPGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEE 133
E G CS +C N S C+C L D TC + FL+ + R I D++
Sbjct: 1535 EGRGPCSHLCLINHNRSAACACPHLMKLSSDKKTCYEMK---KFLLYARRSEIRGVDIDN 1591
Query: 134 KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
+ V +D V + +D +YW D + I NGT + +I
Sbjct: 1592 PYVNFITA-FTVPDIDDVAVIDFDASEERLYWTDIKTQTITRAFINGTGLETVISRDIQS 1650
Query: 194 PRGMMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
RG+ +D +R L+W + + +I +DGS +++II
Sbjct: 1651 IRGLAVDWV--SRNLYWISSEFDETQINVARLDGSLKTSII------------------- 1689
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+D C + + KLYW D GN + + ANMDGSN+ IL
Sbjct: 1690 ----HGIDKPQCLAAH--------PVRGKLYWTD--GNTINM----ANMDGSNSKILFQN 1731
Query: 313 QLYE-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
Q L++D LY W G N I R +DG N I S K
Sbjct: 1732 QKEPVGLSIDYVENKLY-----------WISSG-NGTINRCNLDGGNLEVIESMKEELTK 1779
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
L I +++++AD L + CN GR IL
Sbjct: 1780 ATALTIMDKKLWWADQNLAQLGTCN-KRDGRNPSIL 1814
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 156/436 (35%), Gaps = 103/436 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT---CPPGEIL 61
C+ L K+C+G DC + +DE C K L S C C+ C P E+
Sbjct: 3729 CLQLEKICNGINDCGDNSDE------EHCSGKLSLKSKPCKKDEF--TCSNRNCIPMELQ 3780
Query: 62 SNDSVTCQDM-------------------NECEQPGYCSQMCTNTKGSYICSCNEGYVLE 102
+ C D N C YC+Q+ K S C C G+
Sbjct: 3781 CDSLDDCGDGSDEQGCLKTPIEHTCENNGNPCGDDAYCNQI----KTSVFCRCKPGFQRN 3836
Query: 103 YDNHTCKAINHSAAFLIISNR--------HSILVADLEEK-----GKDHRAQDIVVSGLD 149
C +N F I S+ + + +EK K Q + ++
Sbjct: 3837 MKGRECADLNECLLFGICSHHCLNTRGSYKCVCDQNFQEKNNSCIAKGSEDQALYIANDT 3896
Query: 150 LVEGLAY--DWIGGHIYWLDSRLN-RIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTR 206
+ G Y ++ GGH N RI D + +++ +PG
Sbjct: 3897 DILGFVYPFNYSGGHQQISHVEHNSRITGMDVHYQRNVIVWSTQF----------NPGGI 3946
Query: 207 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD-SKLDFIDCK 265
+ D E + S +I + P + +D VY+ D S++ +
Sbjct: 3947 FYKMIDAREKRQAN---------SGLICPEFKRPRDIAVDWVAGNVYWTDHSRMHWFS-- 3995
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLE 323
Y+T + L + I ++G N + L++ E A+A++ +
Sbjct: 3996 --------YYTTHWTSLRY----------SINVGQLNGPNCTRLLTNMAGEPYAIAVNPK 4037
Query: 324 NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 383
GM+Y WT G++ IE MDG+ R ++ + P GLT+D R+Y
Sbjct: 4038 RGMMY-----------WTVIGDHSHIEEAAMDGTLRRVLVQKNLQRPTGLTVDHFGERIY 4086
Query: 384 FADSKLDFIDFCNYDG 399
+AD +L I YDG
Sbjct: 4087 WADFELSIIGSVLYDG 4102
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 89/240 (37%), Gaps = 54/240 (22%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI--EVCDENGTNRI----VLAKDNITQP 194
+ ++V + VEGLAY +YW S + I D+ I V+ P
Sbjct: 2261 RQVIVENVGSVEGLAYHRAWDTLYWTSSSTSSITRHTVDQTRPGAIDREAVITMSEDDHP 2320
Query: 195 RGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
+ LD +FWT+W E +P I R + G N ++ST I PNGLT+D ++Y
Sbjct: 2321 HVLALDEC--QNLMFWTNWNEQHPSIMRATLTGKNAHVVVSTDILTPNGLTIDHRAEKLY 2378
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
F+D L KI + DGS ++V
Sbjct: 2379 FSDGSLG----------------------------------KIERCEYDGSQRHVIVKSG 2404
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
L+L + + ++FW+DWG + G + S + P G+
Sbjct: 2405 PGTFLSLAVYDS-----------YIFWSDWGRRAILRSNKYTGGETKILRSDIPHQPMGI 2453
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 8/119 (6%)
Query: 125 SILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
SI+ A L K A +V + + GL D +Y+ D L +IE C+ +G+ R
Sbjct: 2343 SIMRATLTGKN----AHVVVSTDILTPNGLTIDHRAEKLYFSDGSLGKIERCEYDGSQRH 2398
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
V+ K G L + ++FW+DWG + G + S + P G+
Sbjct: 2399 VIVKSG----PGTFLSLAVYDSYIFWSDWGRRAILRSNKYTGGETKILRSDIPHQPMGI 2453
>gi|153792247|ref|NP_443737.2| low-density lipoprotein receptor-related protein 1B precursor [Mus
musculus]
Length = 4599
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 180/420 (42%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+G+ DCP+G+DEG CD EC G CSN C P G +C+CP G L
Sbjct: 1150 CLQPEKLCNGRKDCPDGSDEGDLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPEGHQLKK 1207
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K CSC EG+ L D +C +++ AF+I S R
Sbjct: 1208 DNRTCEIVDYCASHLRCSQVCEQQKHMVKCSCYEGWALGTDGESCTSVDSFEAFIIFSIR 1267
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1268 HEIRRIDLHKGDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAIE 1327
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 1328 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVSKLDGSLRATLIAGAMEHPRAIALDP 1387
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D RR+ + D++
Sbjct: 1388 RYGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFERRIVWTDAR 1445
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS + DG+N ++ G Y +
Sbjct: 1446 SDAI------------YSAFY----------------------DGTNMIEIIRGHEYLSH 1471
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 1472 PFAVS---LYGSE------VYWTDWRTNTLAKANKWTGQNVSVIQKTSAQPFDLQIYHPS 1522
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 148/314 (47%), Gaps = 65/314 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-------PGCDLAECKHKFGLCSNTCHPTPLGALCTCPP 57
CV+L+K+C+G DCP+G DEG P C C+ K + N C C
Sbjct: 90 CVHLSKLCNGVVDCPDGFDEGGHCQELLPSCQQLNCQFKCAMVRN-------ATRCYCED 142
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH---S 114
G ++ D +C+D +EC G CSQ C NT GSY CSC EGY+++ DN +CK +
Sbjct: 143 GFEVAEDGRSCKDQDECSIYGICSQTCKNTYGSYACSCVEGYIMQSDNRSCKVKHEPTDK 202
Query: 115 AAFLIIS---------------------NRHSILVADL------------EEKGKDHRAQ 141
A L+IS NR+ I D E +
Sbjct: 203 APMLLISSLETIELFYINGSKMTTLSSANRNEIHTLDFIYSEEMICWIESRESSNQLKCG 262
Query: 142 DIVVSG-------------LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK 188
I +G VE +A+DW+ +IY++D +RI VC+ NG+ + L +
Sbjct: 263 QITKAGRLTDQRIINSLQSFQNVEQMAFDWLTRNIYFVDHVSDRIFVCNFNGSVCVTLIE 322
Query: 189 DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248
+ P+ + DP G LF+TD+G P+IER +DG NR+ I+ +K P+ L LD+
Sbjct: 323 SELHNPKAIAADPIAGK--LFFTDYGNVPKIERCDLDGMNRTRIVYSKAEQPSALALDLV 380
Query: 249 TRRVYFADSKLDFI 262
R VY+ D LD++
Sbjct: 381 NRLVYWVDLYLDYV 394
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 142/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +CD + DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 2902 RCIPSDGLCDIRDDCGDGSDE-TNCHINECLSKKISGCSQDCQDLPVSYKCKCWPGFQLK 2960
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C EGY + DN + C++++ FLI++
Sbjct: 2961 DDGKTCVDIDECSSGFPCSQQCINTYGTYKCHCAEGYETQPDNPNGCRSLSDEEPFLILA 3020
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
++H I L ++G D+R + I
Sbjct: 3021 DQHEIRKISTDGSNYTLLKQGLNNVIALDFDYREEFIYWIDSSRPNGSRINRMCLNGSDI 3080
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG VL + PR + LDP
Sbjct: 3081 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTVLVSKRLKFPRDLSLDPR 3140
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G L+W D E P I R+GMDG+N+S +I TKI P LT+D R+Y+AD
Sbjct: 3141 AGN--LYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLYWAD 3192
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 128/289 (44%), Gaps = 64/289 (22%)
Query: 69 QDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
Q N C+ G CSQ+C T + + C C GY L+ + +C+ I +FL+ S I
Sbjct: 1833 QGSNSCQVNNGGCSQLCLPTSETTRTCMCTVGYYLQKNRMSCQGIE---SFLMYSVHEGI 1889
Query: 127 LVADLEEKGK----------------DHRAQ-------------------------DIVV 145
LE + K D A+ D+V
Sbjct: 1890 RGIPLEPRDKVDALMPISGAAFAVGIDFHAENDTIYWTDMGLNKISRAKRDQTWKEDVVT 1949
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + + P G
Sbjct: 1950 NGLGRVEGIAVDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIAVHPEKG- 2008
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+LFWT+WG+ P I + +DGS + I+S I WPNG+++D ++Y+ D++ D I+
Sbjct: 2009 -FLFWTEWGQVPCIGKARLDGSEKVMIVSVGITWPNGISIDYEENKLYWCDARSDKIE-- 2065
Query: 266 SLEIKTNVNYSTIFRK--------------LYWIDEGGNGVPLKIGKAN 300
+++ T N + +YW D ++ G N
Sbjct: 2066 RIDLDTGANREVLLSGSNVDLFSVAVFGAYIYWSDRAHANGSVRRGHKN 2114
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 88/158 (55%), Gaps = 13/158 (8%)
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL-DSRLNRI 173
A ++ ++ S L+ + G + + I+ LD VEG+A DWIG ++YW D I
Sbjct: 567 ANYIYFADTTSFLIGRQKIDGTER--ETILKDDLDNVEGIAVDWIGNNLYWTNDGHRKTI 624
Query: 174 EVC--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP------RIERIGMD 225
V ++ +R L + ++ PR +++DP G W++WTDW E+ RIE+ MD
Sbjct: 625 NVARLEKASQSRKTLLEGGMSHPRAIVVDPVNG--WMYWTDWKEDKIDDSVGRIEKAWMD 682
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G NR +++K+ WPNGLTLD T +Y+ D+ D I+
Sbjct: 683 GVNRQVFVTSKMLWPNGLTLDFHTSTLYWCDAYYDHIE 720
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 131/330 (39%), Gaps = 80/330 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNT---------CHPTPLGALCTC 55
C+ + CD DC +G+DE GC +H C N C+ C C
Sbjct: 3774 CIPMELQCDSLDDCGDGSDE-QGCLKTPIEH---TCENNGNPCGDDAYCNQIKTSVFCRC 3829
Query: 56 PPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA 115
PG + C D+NEC G CS C NT+GSY C C++ + + N++C A
Sbjct: 3830 KPGFQRNMKGRECADLNECLLFGICSHHCLNTRGSYKCVCDQNF--QEKNNSCIAKGSED 3887
Query: 116 AFLIISNRHSIL--------------VADLEEKGK------------------------- 136
L I+N IL ++ +E +
Sbjct: 3888 QALYIANDTDILGFVYPFNYSGGHQQISHVEHNSRITGMDVHYQRNVIVWSTQFNPGGIF 3947
Query: 137 ----DHRAQDIVVSGLDLVE-----GLAYDWIGGHIYWLD-SRLN--------------R 172
D R + SGL E +A DW+ G++YW D SR++
Sbjct: 3948 YKMIDAREKRQANSGLICPEFKRPRDIAVDWVAGNVYWTDHSRMHWFSYYTTHWTSLRYS 4007
Query: 173 IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI 232
I V NG N L + +P + ++P G ++WT G++ IE MDG+ R +
Sbjct: 4008 INVGQLNGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVIGDHSHIEEAAMDGTLRRVL 4065
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ + P GLT+D R+Y+AD +L I
Sbjct: 4066 VQKNLQRPTGLTVDHFGERIYWADFELSII 4095
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 127/339 (37%), Gaps = 99/339 (29%)
Query: 77 PGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK 134
PG CS +C +++ + C C G+ + D +CK + R I
Sbjct: 483 PGGCSHICLLSSSYKTRTCRCRTGFNMGSDGRSCKRPKNELFLFYGKGRPGI-------- 534
Query: 135 GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
V G+DL +A + ++ +N+ P
Sbjct: 535 ----------VRGMDLNTKIA--------------------------DECMIPIENLVNP 558
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
R LD ++++ D + I R +DG+ R TI+ + G+ +D
Sbjct: 559 RA--LDFHAEANYIYFAD-TTSFLIGRQKIDGTERETILKDDLDNVEGIAVDW------- 608
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
I LYW ++G + + + + L+ G +
Sbjct: 609 -----------------------IGNNLYWTNDGHRKT-INVARLEKASQSRKTLLEGGM 644
Query: 315 YE--ALALDLENGMLYYSTLKCTRWLFWTDWGENP------RIERIGMDGSNRSTIISTK 366
A+ +D NG W++WTDW E+ RIE+ MDG NR +++K
Sbjct: 645 SHPRAIVVDPVNG-----------WMYWTDWKEDKIDDSVGRIEKAWMDGVNRQVFVTSK 693
Query: 367 IYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+ WPNGLTLD T +Y+ D+ D I+ +GT R+ V
Sbjct: 694 MLWPNGLTLDFHTSTLYWCDAYYDHIEKVFLNGTHRKVV 732
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G N ++ST I PNGLT+D ++YF+D L
Sbjct: 2327 ECQNLMFWTNWNEQHPSIMRATLTGKNAHVVVSTDILTPNGLTIDHRAEKLYFSDGSLGK 2386
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 2387 IERCEYDGSQRHVIV 2401
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 128/336 (38%), Gaps = 59/336 (17%)
Query: 75 EQPGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEE 133
E G CS +C N S C+C L D TC + FL+ + R I D++
Sbjct: 1535 EGRGPCSHLCLINHNRSAACACPHLMKLSSDKKTCYEMK---KFLLYARRSEIRGVDIDN 1591
Query: 134 KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
+ V +D V + +D +YW D + I NGT + +I
Sbjct: 1592 PYVNFITA-FTVPDIDDVAVIDFDASEERLYWTDIKTQTITRAFINGTGLETVISRDIQS 1650
Query: 194 PRGMMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
RG+ +D +R L+W + + +I +DGS +++II
Sbjct: 1651 IRGLAVDWV--SRNLYWISSEFDETQINVARLDGSLKTSII------------------- 1689
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+D C + + KLYW D GN + + ANMDGSN+ IL
Sbjct: 1690 ----HGIDKPQCLAAH--------PVRGKLYWTD--GNTINM----ANMDGSNSKILFQN 1731
Query: 313 QLYE-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
Q L++D LY W G N I R +DG N I S K
Sbjct: 1732 QKEPVGLSIDYVENKLY-----------WISSG-NGTINRCNLDGGNLEVIESMKEELTK 1779
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
L I +++++AD L + CN GR IL
Sbjct: 1780 ATALTIMDKKLWWADQNLAQLGTCN-KRDGRNPSIL 1814
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 89/240 (37%), Gaps = 54/240 (22%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI--EVCDENGTNRI----VLAKDNITQP 194
+ ++V + VEGLAY +YW S + I D+ I V+ P
Sbjct: 2261 RQVIVENVGSVEGLAYHRAWDTLYWTSSSTSSITRHTVDQTRPGAIDREAVITMSEDDHP 2320
Query: 195 RGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
+ LD +FWT+W E +P I R + G N ++ST I PNGLT+D ++Y
Sbjct: 2321 HVLALDEC--QNLMFWTNWNEQHPSIMRATLTGKNAHVVVSTDILTPNGLTIDHRAEKLY 2378
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
F+D L KI + DGS ++V
Sbjct: 2379 FSDGSLG----------------------------------KIERCEYDGSQRHVIVKSG 2404
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
L+L + + ++FW+DWG + G + S + P G+
Sbjct: 2405 PGTFLSLAVYDS-----------YIFWSDWGRRAILRSNKYTGGETKILRSDIPHQPMGI 2453
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 8/119 (6%)
Query: 125 SILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
SI+ A L K A +V + + GL D +Y+ D L +IE C+ +G+ R
Sbjct: 2343 SIMRATLTGKN----AHVVVSTDILTPNGLTIDHRAEKLYFSDGSLGKIERCEYDGSQRH 2398
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
V+ K G L + ++FW+DWG + G + S + P G+
Sbjct: 2399 VIVKSG----PGTFLSLAVYDSYIFWSDWGRRAILRSNKYTGGETKILRSDIPHQPMGI 2453
>gi|195167084|ref|XP_002024364.1| GL14843 [Drosophila persimilis]
gi|194107737|gb|EDW29780.1| GL14843 [Drosophila persimilis]
Length = 1512
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 153/306 (50%), Gaps = 48/306 (15%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCD-LAECKHKFGLCSNTCHPTPL-GALCTCPPGEI 60
+ C+ L KVCDG +DC +G+DE C+ +C K TCH P GA C CP G
Sbjct: 173 EHCLELAKVCDGHSDCSDGSDEYETCNSKPDCSAKSCPAGATCHMMPTDGAQCYCPAGFR 232
Query: 61 LSNDSVTCQDMNECEQ--PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN-HSAAF 117
L+ C+D++EC++ CSQ C NT G Y CSC+ GY+L DN TC+A N H +
Sbjct: 233 LAKFQNKCEDIDECQERESELCSQSCENTSGGYRCSCDPGYLLAKDNRTCRATNTHGSEH 292
Query: 118 LIISNRHSILVADLEEKGKDH--------------------------------------- 138
++ + V + ++H
Sbjct: 293 PLLLYTTQMNVMGMHLGSRNHVYQVAGNLSKVIGVAYDGSHIYWTNIQNEDESIVKANAD 352
Query: 139 --RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
A+ ++ SGLD E LA DW+ +IY+ D+ + I VC + N +VL +++ QPRG
Sbjct: 353 GTHAEILLTSGLDAPEDLAVDWLTQNIYFSDNVMRHIAVCSHDALNCVVLVTEDVHQPRG 412
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ L P G +FWTDWG P I R MDG + I+S I+WPNG+ LD+ +R+Y+ D
Sbjct: 413 LALWPQRGQ--MFWTDWGVKPMIVRASMDGKRSTPIVSENIHWPNGIALDMHQQRIYWVD 470
Query: 257 SKLDFI 262
+KL +
Sbjct: 471 AKLGSV 476
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 69/121 (57%), Gaps = 5/121 (4%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFG----LCSNTCHPTPLGALCTCPPGEI 60
CV++++VC+ DC NG+DEGP C A C+ G +C + C TP GA+C+C G
Sbjct: 1254 CVDMSRVCNSFPDCQNGSDEGPQCATA-CRASAGGGRPVCQHKCRATPAGAVCSCFDGYR 1312
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
L D +C D+NEC C+Q+C NT G Y C C+ ++L D +CK++ A L
Sbjct: 1313 LDTDQRSCVDVNECLDGQPCAQICENTLGGYQCQCHADFMLRQDRVSCKSLQAGATLLFS 1372
Query: 121 S 121
S
Sbjct: 1373 S 1373
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 102/444 (22%), Positives = 174/444 (39%), Gaps = 88/444 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ + CDGK+DC + +DE GC ++ K L CP G L
Sbjct: 93 CIPIEFQCDGKSDCADSSDELDGCKESQASCKGHL---------------CPNGRCLQRK 137
Query: 65 SVTCQDMNEC----EQPGYCSQMCTNTKGSYICSCNEGYVLEY----DNH---------- 106
C +++C ++ G C +C G ++C N+ + LE D H
Sbjct: 138 QWLCDGVDDCGDGSDEHG-CVDLCQPEMGKFMCR-NKEHCLELAKVCDGHSDCSDGSDEY 195
Query: 107 -TCKAINHSAAFLIISNRHSIL---------------VADLEEKGKD-----HRAQDIVV 145
TC + +A + + +A + K +D R ++
Sbjct: 196 ETCNSKPDCSAKSCPAGATCHMMPTDGAQCYCPAGFRLAKFQNKCEDIDECQERESELCS 255
Query: 146 SGLDLVE-GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ G G++ D+R R + +G+ +L GM L G
Sbjct: 256 QSCENTSGGYRCSCDPGYLLAKDNRTCRAT--NTHGSEHPLLLYTTQMNVMGMHL----G 309
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
+R + G ++ + DGS+ IYW N D + + + + +
Sbjct: 310 SRNHVYQVAGNLSKVIGVAYDGSH--------IYWTNIQNEDESIVKANADGTHAEILLT 361
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDL 322
L+ ++ + + +Y+ D V I + D N +LV+ +++ LAL
Sbjct: 362 SGLDAPEDLAVDWLTQNIYFSD----NVMRHIAVCSHDALNCVVLVTEDVHQPRGLALWP 417
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+ G +FWTDWG P I R MDG + I+S I+WPNG+ LD+ +R+
Sbjct: 418 QRGQ-----------MFWTDWGVKPMIVRASMDGKRSTPIVSENIHWPNGIALDMHQQRI 466
Query: 383 YFADSKLDFIDFCNYDGTGRQQVI 406
Y+ D+KL + DGTGR+ V+
Sbjct: 467 YWVDAKLGSVQTVRPDGTGRRTVL 490
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 46/257 (17%), Positives = 104/257 (40%), Gaps = 15/257 (5%)
Query: 40 CSNTC---HPTPLGALCTCPPGEILSNDSVTCQDMNECEQ-----PGYCSQMCTNTKGSY 91
CS+ C P G C CP G L+ D C + ++ + ++ G +
Sbjct: 560 CSHLCLLAEPEVGGRSCACPDGMRLAPDQQRCMQTVKRQRLFVGVGQFLLEIEHTAFGRH 619
Query: 92 ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLV 151
+ S + + ++N LII++ ++A+ + R + ++ S L V
Sbjct: 620 VVSASHALDIVISEMVYNSVN---GTLIIADNERRMIAEYQPGLGQGRLRTLIHSNLGNV 676
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA-KDNITQPRGMMLDPSPGTRWLFW 210
LA+D + ++YW D+ +E+ + +R ++ P G+ + P+ G ++
Sbjct: 677 SALAFDHLSQNLYWSDAERRVVELYSFHTRHRALIRFFAGQESPIGLSVMPAEGYLYVAL 736
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL--DIATRRVYFADSKLDFIDCKSLE 268
+ I+R+ + G T + + + + + D +Y++DS + I
Sbjct: 737 K-ARRHTHIDRLPLSGKGSPTHVFEEELGDDDIKMATDHDQHTLYWSDSDMGMISYTDYR 795
Query: 269 IKTNVNYSTIFRKLYWI 285
++ + + R+ Y +
Sbjct: 796 QTQSMTFRSKLRRPYSL 812
>gi|213625398|gb|AAI70523.1| Ldlr2-a protein [Xenopus laevis]
gi|213626297|gb|AAI70522.1| Ldlr2-a protein [Xenopus laevis]
Length = 892
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 159/304 (52%), Gaps = 47/304 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + KVCD K DC + DE C EC G CS+ C+ +G C C G L
Sbjct: 286 ECITMDKVCDKKRDCRDWTDEPIKECGENECLRNNGGCSHICNDLKIGYECLCNEGYRLV 345
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D+NECE P CSQ+C N G Y C C EGY ++ +CK+I + A+L +N
Sbjct: 346 -DQKRCEDLNECENPNTCSQICINLDGGYKCECREGYQMDPVTASCKSIG-TVAYLFFTN 403
Query: 123 RH--------------------SILVADLE---------------------EKGKDHRAQ 141
RH +++ D+E +K +
Sbjct: 404 RHEVRKMTLDRSEYTSFIPRLKNVVALDMEIASNKIYWSDLTQRKIYSASMDKADNTSHH 463
Query: 142 DIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ V+S + +G+A DWI G+IYW DS+ + I V + G+ R L D++ +PR +++D
Sbjct: 464 ETVISNQIQAPDGIAVDWIHGNIYWTDSKFSTISVANTEGSKRKTLFTDDLAKPRDIVVD 523
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
PS G +++WTDWG +IE+ G++G +R +++ I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 524 PSQG--FMYWTDWGLPAKIEKGGLNGVDRYPLVTDNIEWPNGITLDLISQRLYWVDSKLH 581
Query: 261 FIDC 264
+ C
Sbjct: 582 SLSC 585
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 26/152 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
++ K +D S + + +L +ALD+E + ++W+D + +I M
Sbjct: 406 EVRKMTLDRSEYTSFIP-RLKNVVALDMEIA---------SNKIYWSDLTQR-KIYSASM 454
Query: 355 DG----SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
D S+ T+IS +I P+G+ +D +Y+ DSK I N +G+ R+ +
Sbjct: 455 DKADNTSHHETVISNQIQAPDGIAVDWIHGNIYWTDSKFSTISVANTEGSKRKTL----- 509
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
FT+DL + +D G +Y++ G
Sbjct: 510 ---FTDDLAKPRDI---VVDPSQGFMYWTDWG 535
>gi|195174473|ref|XP_002027998.1| GL16648 [Drosophila persimilis]
gi|194115712|gb|EDW37755.1| GL16648 [Drosophila persimilis]
Length = 816
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/334 (33%), Positives = 167/334 (50%), Gaps = 56/334 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGA-LCTCPPGEILSN 63
CV+ VCDG +DCP+G DE C + + C C T G+ C C G ++
Sbjct: 266 CVHQKHVCDGHSDCPSGEDE-LNCPEEQSCFEPKQCEQLCIKTKKGSDECACRLGYLMDK 324
Query: 64 DSVTCQDMNECE--QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+ V C D++EC+ CSQ C NT GS+ICSC GY+L D +CKA+ A L+++
Sbjct: 325 NKVNCTDIDECQYLTSPVCSQKCQNTLGSFICSCEMGYILRPDLRSCKALG-GAMTLLVA 383
Query: 122 NR--------------------HSILVADLEEKG------------------KDHRAQDI 143
NR H+ + D + R +D+
Sbjct: 384 NRWDIRRVTLSNNRYTAVVKGLHNAIALDFHYRRALMFWSDVSTDVIKMVYMNGTRVRDV 443
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ GL+ G+A DWI ++W DS R+EV + G R V+A +++ +PR +++ P
Sbjct: 444 IKWGLESPGGIAVDWIHDLLFWTDSGTRRVEVSNFQGNLRTVIASNDLDKPRAIVI--HP 501
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G FW+DWG NP+IER MDGS R IIS + WPNGL +D R++Y+AD+K I+
Sbjct: 502 GEALAFWSDWGPNPKIERANMDGSQRQVIISNGVTWPNGLAIDYPNRKIYWADAKQHAIE 561
Query: 264 CKSLE-------IKTNVNYS---TIFR-KLYWID 286
C +L+ + T++ + TIF +YW D
Sbjct: 562 CSNLDGTDRIKILSTHLPHPFALTIFEDTMYWTD 595
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 175/446 (39%), Gaps = 104/446 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT--------- 54
RC+ T +CDG DC + DE C L +C LC + T L +C
Sbjct: 220 RCILRTWLCDGYADCSSAEDE-VDCHL-QCDPGQFLCPTKQNVTNL-KICVHQKHVCDGH 276
Query: 55 --CPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-GSYICSCNEGYVLEYDNHTC--- 108
CP GE D + C + C +P C Q+C TK GS C+C GY+++ + C
Sbjct: 277 SDCPSGE----DELNCPEEQSCFEPKQCEQLCIKTKKGSDECACRLGYLMDKNKVNCTDI 332
Query: 109 -------------KAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLA 155
K N +F+ IL DL R+ + + L+
Sbjct: 333 DECQYLTSPVCSQKCQNTLGSFICSCEMGYILRPDL-------RSCKALGGAMTLLVANR 385
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
+D + R+ + N +V N + LD +FW+D
Sbjct: 386 WD------------IRRVTL-SNNRYTAVVKGLHN-----AIALDFHYRRALMFWSDVST 427
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNY 275
+ I+ + M+G+ +I + P G+ +D
Sbjct: 428 DV-IKMVYMNGTRVRDVIKWGLESPGGIAVDW---------------------------- 458
Query: 276 STIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCT 335
I L+W D G V + +N G+ +++ S L + A+ + G
Sbjct: 459 --IHDLLFWTDSGTRRVEV----SNFQGNLRTVIASNDLDKPRAIVIHPGEAL------- 505
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
FW+DWG NP+IER MDGS R IIS + WPNGL +D R++Y+AD+K I+
Sbjct: 506 --AFWSDWGPNPKIERANMDGSQRQVIISNGVTWPNGLAIDYPNRKIYWADAKQHAIECS 563
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DGT R +++ L F + D
Sbjct: 564 NLDGTDRIKILSTHLPHPFALTIFED 589
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 6/141 (4%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C + S C C G L+ D TCK+ + ++++ R I + L+ +
Sbjct: 649 GGCSHLCLPNQTSRRCGCPIGLSLKDDGKTCKST--ADKLVLVARRKDIRLRQLKNNQAE 706
Query: 138 HRAQDIVVSGLDLVEGLAYDWIG--GHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D++V +L +A DW IYW D + I NG+ + + N+ P
Sbjct: 707 LSEVDMIVPLDNLKHAVALDWCSDTDFIYWTDVERSTINKAHINGSYQQRVVHSNLVSPV 766
Query: 196 GMMLDPSPGTRWLFWTDWGEN 216
G+ LD T L+WTD N
Sbjct: 767 GLALDWI--TDKLYWTDPSTN 785
>gi|392348187|ref|XP_342878.5| PREDICTED: low-density lipoprotein receptor-related protein 8
isoform 3 [Rattus norvegicus]
Length = 873
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 154/298 (51%), Gaps = 46/298 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CV+ KVCD + DC + +DE C L EC H G CS+ C +G CTCP G L
Sbjct: 221 CVDGGKVCDDQRDCRDWSDEPQKVCGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL- 279
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D TC D++EC+ P CSQ+C N KG + C C+ GY ++ CKA+ + LI +NR
Sbjct: 280 DQKTCGDIDECQDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAVAGRSPSLIFTNR 339
Query: 124 HSILVADLEEKG--------KDHRAQDIVV------------------------------ 145
H + DL ++ K+ A D+ V
Sbjct: 340 HEVRRIDLVKRDYSRLIPMLKNVVALDVEVDTNRIYWCDLSYRKIYSAHMDKASIPDEQV 399
Query: 146 ----SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
L EGLA DW+ HIYW DS + V +G R L ++++PR + +DP
Sbjct: 400 VLIGEQLHSPEGLAVDWVHKHIYWTDSGNKTVSVATTDGRRRCTLFNRDLSEPRAIAVDP 459
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++W+DWG +IE+ G++G++R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 460 LRG--FMYWSDWGFQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 515
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 175/427 (40%), Gaps = 97/427 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT---CPPGEIL 61
C+ K C+ + DC +G+DE GC L +TC P C C G +
Sbjct: 180 CILAIKRCNQERDCLDGSDEA-GC----------LQESTCE-GPRRFQCKSGECVDGGKV 227
Query: 62 SNDSVTCQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110
+D C+D +NEC G CS +CT+ K + C+C G+ L D TC
Sbjct: 228 CDDQRDCRDWSDEPQKVCGLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGD 286
Query: 111 INH----SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
I+ A I N + + D + V G + I + +
Sbjct: 287 IDECQDPDACSQICVNYKGYFKCECHPGYE----MDTLTKNCKAVAGRSPSLIFTNRH-- 340
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226
+ RI++ + + I + K+ + LD T ++W D +I MD
Sbjct: 341 --EVRRIDLVKRDYSRLIPMLKNVVA------LDVEVDTNRIYWCDLSYR-KIYSAHMDK 391
Query: 227 SN----RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
++ + +I +++ P GL +D + + +
Sbjct: 392 ASIPDEQVVLIGEQLHSPEGLAVDW------------------------------VHKHI 421
Query: 283 YWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFW 340
YW D G V + A DG L + L E A+A+D G +Y W
Sbjct: 422 YWTDSGNKTVSV----ATTDGRRRCTLFNRDLSEPRAIAVDPLRGFMY-----------W 466
Query: 341 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
+DWG +IE+ G++G++R T++S I WPNG+TLD+ ++R+Y+ DSKL + +++G
Sbjct: 467 SDWGFQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFNGG 526
Query: 401 GRQQVIL 407
R+ +I
Sbjct: 527 NRKMLIF 533
>gi|351715301|gb|EHB18220.1| Low-density lipoprotein receptor-related protein 8, partial
[Heterocephalus glaber]
Length = 860
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 152/299 (50%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C G C+CP G L
Sbjct: 208 CVLAIKRCNQERDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKKGFECSCPAGLRLL 266
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG + C C+ GY ++ +CKA+ + LI +N
Sbjct: 267 -DQKTCVDIDECEDPDACSQICVNYKGYFKCECHPGYEVDTLTESCKAVAGKSPSLIFTN 325
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D Q
Sbjct: 326 RHEVRRIDLVKRDYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSANMDKASDPADQ 385
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++++ L EGLA DW+ HIYW DS I V +G R L ++++PR + +D
Sbjct: 386 EVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATLDGHRRCTLFSRDLSEPRAIAVD 445
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG +IE+ G++G +R T++S I WPNG+ LD+ +R+Y+ DSKL
Sbjct: 446 PLRG--FMYWSDWGYQAKIEKSGLNGVDRQTLVSDNIEWPNGIALDLLNQRLYWVDSKL 502
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 171/420 (40%), Gaps = 83/420 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTCHPTPLGALCT----CPPG 58
C++L CDG DC + +DE C L C+ +F TC C CP G
Sbjct: 168 ECIHLGWRCDGDRDCKDKSDEA-DCLLGTCRGEEFQCGDGTC--VLAIKRCNQERDCPDG 224
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH---- 113
S+++ Q +NEC G CS +CT+ K + CSC G L D TC I+
Sbjct: 225 ---SDEAGCLQGLNECLHNNGGCSHICTDLKKGFECSCPAGLRL-LDQKTCVDIDECEDP 280
Query: 114 SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI 173
A I N + + D + V G + I + + + RI
Sbjct: 281 DACSQICVNYKGYFKCECHPGYE----VDTLTESCKAVAGKSPSLIFTNRH----EVRRI 332
Query: 174 EVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS----NR 229
++ + + I + K+ + LD T ++W D +I MD + ++
Sbjct: 333 DLVKRDYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSANMDKASDPADQ 385
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+I +++ P GL +D + + +YW D G
Sbjct: 386 EVLIDEQLHSPEGLAVDW------------------------------VHKHIYWTDSGN 415
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
I A +DG L S L E A+A+D G +Y W+DWG
Sbjct: 416 K----TISVATLDGHRRCTLFSRDLSEPRAIAVDPLRGFMY-----------WSDWGYQA 460
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+IE+ G++G +R T++S I WPNG+ LD+ +R+Y+ DSKL + ++ G R+ +I
Sbjct: 461 KIEKSGLNGVDRQTLVSDNIEWPNGIALDLLNQRLYWVDSKLHELSSIDFSGGNRKMLIF 520
>gi|47117276|sp|Q924X6.2|LRP8_MOUSE RecName: Full=Low-density lipoprotein receptor-related protein 8;
Short=LRP-8; AltName: Full=Apolipoprotein E receptor 2;
Flags: Precursor
gi|162319136|gb|AAI56401.1| Low density lipoprotein receptor-related protein 8, apolipoprotein
e receptor [synthetic construct]
Length = 996
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/298 (35%), Positives = 154/298 (51%), Gaps = 46/298 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CV+ KVCD + DC + +DE C L EC H G CS+ C +G CTCP G L
Sbjct: 344 CVDGGKVCDDQRDCRDWSDEPQKVCGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL- 402
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D TC D++EC+ P CSQ+C N KG + C C+ GY ++ CKA+ + LI +NR
Sbjct: 403 DQKTCGDIDECQDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAVAGKSPSLIFTNR 462
Query: 124 HSILVADLEEKG--------KDHRAQDIVVS----------------------------- 146
H + DL ++ K+ A D+ V+
Sbjct: 463 HEVRRIDLVKRDYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAHMDKASIPDEQV 522
Query: 147 -----GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
L EGLA DW+ HIYW DS I V +G R L +++PR + +DP
Sbjct: 523 VLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATTDGRRRCTLFSRELSEPRAIAVDP 582
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++W+DWG +IE+ G++G++R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 583 LRG--FMYWSDWGFQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 638
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 176/427 (41%), Gaps = 97/427 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT---CPPGEIL 61
CV K C+ + DCP+G+DE GC L +TC P C C G +
Sbjct: 303 CVLAIKRCNQERDCPDGSDEA-GC----------LQESTCE-GPRRFQCKSGECVDGGKV 350
Query: 62 SNDSVTCQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110
+D C+D +NEC G CS +CT+ K + C+C G+ L D TC
Sbjct: 351 CDDQRDCRDWSDEPQKVCGLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGD 409
Query: 111 INH----SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
I+ A I N + + D + V G + I + +
Sbjct: 410 IDECQDPDACSQICVNYKGYFKCECHPGYE----MDTLTKNCKAVAGKSPSLIFTNRH-- 463
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226
+ RI++ + + I + K+ + LD T ++W D +I MD
Sbjct: 464 --EVRRIDLVKRDYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAHMDK 514
Query: 227 SN----RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
++ + +I +++ P GL +D + + +
Sbjct: 515 ASIPDEQVVLIDEQLHSPEGLAVDW------------------------------VHKHI 544
Query: 283 YWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFW 340
YW D G I A DG L S +L E A+A+D G +Y W
Sbjct: 545 YWTDSGNK----TISVATTDGRRRCTLFSRELSEPRAIAVDPLRGFMY-----------W 589
Query: 341 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
+DWG +IE+ G++G++R T++S I WPNG+TLD+ ++R+Y+ DSKL + +++G
Sbjct: 590 SDWGFQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFNGG 649
Query: 401 GRQQVIL 407
R+ +I
Sbjct: 650 NRKMLIF 656
>gi|7861733|gb|AAF70379.1|AF176832_1 low density lipoprotein receptor related protein-deleted in tumor
[Homo sapiens]
Length = 4599
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 184/420 (43%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+GK DCP+G+DEG CD EC G CSN C P G +C+CP G L+
Sbjct: 1150 CLQPEKLCNGKKDCPDGSDEGYLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLNK 1207
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC EG+ L+ D +C +++ AF+I S R
Sbjct: 1208 DNKTCEIVDYCSNHLKCSQVCEQHKHTVKCSCYEGWKLDVDGESCTSVDPFEAFIIFSIR 1267
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1268 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAIE 1327
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 1328 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDP 1387
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 1388 RYGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAR 1445
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG+N ++ G Y +
Sbjct: 1446 SDAI------------YSALY----------------------DGTNMIEIIRGHEYLSH 1471
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 1472 PFAVS---LYGSE------VYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYHPS 1522
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 144/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +CD K DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 2902 RCIPSGGLCDNKDDCGDGSDE-RNCHINECLSKKVSGCSQDCQDLPVSYKCKCWPGFQLK 2960
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C +GY ++ DN + CK+++ FLI++
Sbjct: 2961 DDGKTCVDIDECSSGFPCSQQCINTYGTYKCLCTDGYEIQPDNPNGCKSLSDEEPFLILA 3020
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
+ H I L ++G D+R + I
Sbjct: 3021 DHHEIRKISTDGSNYTLLKQGLNNVIAIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDI 3080
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG +L + PR + LDP
Sbjct: 3081 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTILVSKRLKFPRDLSLDPQ 3140
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +L+W D E P I R+GMDG+N+S +I TKI P LT+D RR+Y+AD
Sbjct: 3141 AG--YLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNRRLYWAD 3192
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 150/312 (48%), Gaps = 55/312 (17%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCD--LAECKHKFGLCSNTCHPTPLGALCTCPPGE 59
++CV+L+++C+G DCP+G DEG C L+ C+ C C C C G
Sbjct: 87 TNKCVHLSQLCNGVLDCPDGYDEGVHCQELLSNCQQLN--CQYKCTMVRNSTRCYCEDGF 144
Query: 60 ILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI---NHSAA 116
++ D +C+D +EC G CSQ C NT GSY CSC EGY+++ DN +CKA
Sbjct: 145 EITEDGRSCKDQDECAVYGTCSQTCRNTHGSYTCSCVEGYLMQPDNRSCKAKIEPTDRPP 204
Query: 117 FLIISNRHSI-------------------------------LVADLEEKGKDHRAQDI-- 143
L+I+N +I ++ +E + ++ + I
Sbjct: 205 ILLIANFETIEVFYLNGSKMATLSSVNGNEIHTLDFIYNEDMICWIESRESSNQLKCIQI 264
Query: 144 -------------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ V+ +A DW+ ++Y++D +RI VC+ NG+ + L
Sbjct: 265 TKAGGLTDEWTINILQSFHNVQQMAIDWLTRNLYFVDHVGDRIFVCNSNGSVCVTLIDLE 324
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P+ + +DP G LF+TD+G ++ER MDG NR+ II +K P L LD+ +
Sbjct: 325 LHNPKAIAVDPIAGK--LFFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNK 382
Query: 251 RVYFADSKLDFI 262
VY+ D LD++
Sbjct: 383 LVYWVDLYLDYV 394
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 137/323 (42%), Gaps = 61/323 (18%)
Query: 69 QDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
Q N C+ G CSQ+C T + + C C GY L+ + +C+ I +FL+ S I
Sbjct: 1833 QGSNSCQLNNGGCSQLCLPTSETTRTCMCTVGYYLQKNRMSCQGIE---SFLMYSVHEGI 1889
Query: 127 LVADLEEKGK----------------DHRAQ-------------------------DIVV 145
LE K D A+ DI+
Sbjct: 1890 RGIPLEPSDKMDALMPISGTSFAVGIDFHAENDTIYWTDMGFNKISRAKRDQTWKEDIIT 1949
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + + P G
Sbjct: 1950 NGLGRVEGIAVDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIAVHPEKGL 2009
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
LFWT+WG+ P I + +DGS + ++S I WPNG+++D ++Y+ D++ D I+
Sbjct: 2010 --LFWTEWGQMPCIGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERI 2067
Query: 266 SLEIKTN------------VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
LE N + + +YW D ++ G N D + + +G
Sbjct: 2068 DLETGGNREMVLSGSNVDMFSVAVFGAYIYWSDRAHANGSVRRGHKN-DATETITMRTGL 2126
Query: 314 LYEALALDLENGMLYYSTLKCTR 336
+ + N + T C R
Sbjct: 2127 GVNLKEVKIFNRVREKGTNVCAR 2149
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 138/328 (42%), Gaps = 74/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSNT--CHPTPLGALCTCPP 57
+C+ + CD DC +G+DE GC +A C+ C + C+ C C P
Sbjct: 3773 KCIPMDLQCDRLDDCGDGSDE-QGCRIAPTEYTCEDNVNPCGDDAYCNQIKTSVFCRCKP 3831
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G + + C+D+NEC G CS C N +GSY C C++ + + N+TC A
Sbjct: 3832 GFQRNMKNRQCEDLNECLVFGTCSHQCINVEGSYKCVCDQNF--QERNNTCIAEGSEDQV 3889
Query: 118 LIISNRHSIL--------------VADLEEKGK-----DHRAQDIVV------------- 145
L I+N IL ++ +E + + +D+++
Sbjct: 3890 LYIANDTDILGFIYPFNYSGDHQQISHIEHNSRITGMDVYYQRDMIIWSTQFNPGGIFYK 3949
Query: 146 -----------SGLDLVE-----GLAYDWIGGHIYWLD-SRLN--------------RIE 174
SGL E +A DW+ G+IYW D SR++ I
Sbjct: 3950 RIHGREKRQANSGLICPEFKRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSIN 4009
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V NG N L + +P + ++P G ++WT G++ IE MDG+ R ++
Sbjct: 4010 VGQLNGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVVGDHSHIEEAAMDGTLRRILVQ 4067
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D + R+Y+AD +L I
Sbjct: 4068 KNLQRPTGLAVDYFSERIYWADFELSII 4095
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 107/240 (44%), Gaps = 55/240 (22%)
Query: 77 PGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA-DLEE 133
PG CS +C +++ + C C G+ L D +CK + R I+ DL
Sbjct: 483 PGGCSHICLLSSSYKTRTCRCRTGFNLGSDGRSCKRPKNELFLFYGKGRPGIVRGMDLNT 542
Query: 134 KGKDH-----------RAQD------------------------------IVVSGLDLVE 152
K D RA D I+ LD VE
Sbjct: 543 KIADEYMIPIENLVNPRALDFHAETNYIYFADTTSFLIGRQKIDGTERETILKDDLDNVE 602
Query: 153 GLAYDWIGGHIYWL-DSRLNRIEVC--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
G+A DWIG ++YW D I V ++ +R L + ++ PRG+++DP G W++
Sbjct: 603 GIAVDWIGNNLYWTNDGHRKTINVARLEKASQSRKTLLEGEMSHPRGIVVDPVNG--WMY 660
Query: 210 WTDWGENP------RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
WTDW E+ RIE+ MDG NR +++K+ WPNGLTLD T +Y+ D+ D I+
Sbjct: 661 WTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTNTLYWCDAYYDHIE 720
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 17/131 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCT 335
+ R LY++D G+ +I N +GS L+ +L+ +A+A+D G L
Sbjct: 293 LTRNLYFVDHVGD----RIFVCNSNGSVCVTLIDLELHNPKAIAVDPIAGKL-------- 340
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
F+TD+G ++ER MDG NR+ II +K P L LD+ + VY+ D LD++
Sbjct: 341 ---FFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVGVV 397
Query: 396 NYDGTGRQQVI 406
+Y G R VI
Sbjct: 398 DYQGKNRHTVI 408
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G N ++ST I PNGLT+D ++YF+D L
Sbjct: 2327 ECQNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGK 2386
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 2387 IERCEYDGSQRHVIV 2401
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 138/310 (44%), Gaps = 39/310 (12%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS MC N S C+C L D TC + FL+ + R I D++
Sbjct: 1538 GPCSHMCLINHNRSAACACPHLMKLSSDKKTCYEMK---KFLLYARRSEIRGVDIDNPYF 1594
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ V +D V + +D +YW D + I+ NGT + +I RG
Sbjct: 1595 NFITA-FTVPDIDDVTVIDFDASEERLYWTDIKTQTIKRAFINGTGLETVISRDIQSIRG 1653
Query: 197 MMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIIS--------------TKIYWPN 241
+ +D +R L+W + + +I +DGS +++II K+YW +
Sbjct: 1654 LAVDWV--SRNLYWISSEFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD 1711
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
G T+++A + ++SK+ F + K + +++Y + KLYWI GNG I + N+
Sbjct: 1712 GNTINMAN--MDGSNSKILFQNQKE-PVGLSIDY--VENKLYWI-SSGNGT---INRCNL 1762
Query: 302 DGSNASILVS--GQLYEALALDLENGMLYYSTLKCTRWLFWTDW-GENPRIERIGMDGSN 358
DG N ++ S +L +A AL + + L+++ + + G NP I R +
Sbjct: 1763 DGGNLEVIESMKEELTKATALTIMDKKLWWADQNLAQLGTCSKRDGRNPTILR-----NK 1817
Query: 359 RSTIISTKIY 368
S ++ K+Y
Sbjct: 1818 TSGVVHMKVY 1827
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 95/224 (42%), Gaps = 33/224 (14%)
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++D L+WTD + I+R ++G+ T+IS I GL +D +R +Y+ S
Sbjct: 1610 VIDFDASEERLYWTDI-KTQTIKRAFINGTGLETVISRDIQSIRGLAVDWVSRNLYWISS 1668
Query: 258 KLDFIDCKSLEIKTNVNYSTIFR--------------KLYWIDEGGNGVPLKIGKANMDG 303
+ D + ++ S I KLYW D GN I ANMDG
Sbjct: 1669 EFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD--GN----TINMANMDG 1722
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
SN+ IL Q E + L ++ Y K L+W G N I R +DG N I
Sbjct: 1723 SNSKILFQNQ-KEPVGLSID-----YVENK----LYWISSG-NGTINRCNLDGGNLEVIE 1771
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
S K L I +++++AD L + C+ GR IL
Sbjct: 1772 SMKEELTKATALTIMDKKLWWADQNLAQLGTCS-KRDGRNPTIL 1814
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 94/242 (38%), Gaps = 58/242 (23%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-----NRIEVCDENGTNR---IVLAKDNIT 192
+ ++V + VEGLAY +YW S + ++ +R I +++D+
Sbjct: 2261 RQVIVENVGSVEGLAYHRAWDTLYWTSSTTSSITRHTVDQTRPGAFDREAVITMSEDD-- 2318
Query: 193 QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
P + LD +FWT+W E +P I R + G N ++ST I PNGLT+D +
Sbjct: 2319 HPHVLALDEC--QNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEK 2376
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+YF+D L KI + DGS ++V
Sbjct: 2377 LYFSDGSLG----------------------------------KIERCEYDGSQRHVIVK 2402
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
L+L + + ++FW+DWG + G + + S + P
Sbjct: 2403 SGPGTFLSLAVYDN-----------YIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPM 2451
Query: 372 GL 373
G+
Sbjct: 2452 GI 2453
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ +V + + GL D+ +Y+ D L +IE C+ +G+ R V+ K G L
Sbjct: 2354 AQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGKIERCEYDGSQRHVIVKSG----PGTFL 2409
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ ++FW+DWG + G + + S + P G+
Sbjct: 2410 SLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGI 2453
>gi|93102379|ref|NP_061027.2| low-density lipoprotein receptor-related protein 1B precursor [Homo
sapiens]
gi|57015418|sp|Q9NZR2.2|LRP1B_HUMAN RecName: Full=Low-density lipoprotein receptor-related protein 1B;
Short=LRP-1B; AltName: Full=Low-density lipoprotein
receptor-related protein-deleted in tumor; Short=LRP-DIT;
Flags: Precursor
gi|119632007|gb|EAX11602.1| low density lipoprotein-related protein 1B (deleted in tumors) [Homo
sapiens]
Length = 4599
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 184/420 (43%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+GK DCP+G+DEG CD EC G CSN C P G +C+CP G L+
Sbjct: 1150 CLQPEKLCNGKKDCPDGSDEGYLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLNK 1207
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC EG+ L+ D +C +++ AF+I S R
Sbjct: 1208 DNKTCEIVDYCSNHLKCSQVCEQHKHTVKCSCYEGWKLDVDGESCTSVDPFEAFIIFSIR 1267
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1268 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAIE 1327
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 1328 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDP 1387
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 1388 RYGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAR 1445
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG+N ++ G Y +
Sbjct: 1446 SDAI------------YSALY----------------------DGTNMIEIIRGHEYLSH 1471
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 1472 PFAVS---LYGSE------VYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYHPS 1522
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 144/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +CD K DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 2902 RCIPSGGLCDNKDDCGDGSDE-RNCHINECLSKKVSGCSQDCQDLPVSYKCKCWPGFQLK 2960
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C +GY ++ DN + CK+++ FLI++
Sbjct: 2961 DDGKTCVDIDECSSGFPCSQQCINTYGTYKCLCTDGYEIQPDNPNGCKSLSDEEPFLILA 3020
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
+ H I L ++G D+R + I
Sbjct: 3021 DHHEIRKISTDGSNYTLLKQGLNNVIAIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDI 3080
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG +L + PR + LDP
Sbjct: 3081 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTILVSKRLKFPRDLSLDPQ 3140
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +L+W D E P I R+GMDG+N+S +I TKI P LT+D RR+Y+AD
Sbjct: 3141 AG--YLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNRRLYWAD 3192
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 150/312 (48%), Gaps = 55/312 (17%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCD--LAECKHKFGLCSNTCHPTPLGALCTCPPGE 59
++CV+L+++C+G DCP+G DEG C L+ C+ C C C C G
Sbjct: 87 TNKCVHLSQLCNGVLDCPDGYDEGVHCQELLSNCQQLN--CQYKCTMVRNSTRCYCEDGF 144
Query: 60 ILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI---NHSAA 116
++ D +C+D +EC G CSQ C NT GSY CSC EGY+++ DN +CKA
Sbjct: 145 EITEDGRSCKDQDECAVYGTCSQTCRNTHGSYTCSCVEGYLMQPDNRSCKAKIEPTDRPP 204
Query: 117 FLIISNRHSI-------------------------------LVADLEEKGKDHRAQDI-- 143
L+I+N +I ++ +E + ++ + I
Sbjct: 205 ILLIANFETIEVFYLNGSKMATLSSVNGNEIHTLDFIYNEDMICWIESRESSNQLKCIQI 264
Query: 144 -------------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ V+ +A DW+ ++Y++D +RI VC+ NG+ + L
Sbjct: 265 TKAGGLTDEWTINILQSFHNVQQMAIDWLTRNLYFVDHVGDRIFVCNSNGSVCVTLIDLE 324
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P+ + +DP G LF+TD+G ++ER MDG NR+ II +K P L LD+ +
Sbjct: 325 LHNPKAIAVDPIAGK--LFFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNK 382
Query: 251 RVYFADSKLDFI 262
VY+ D LD++
Sbjct: 383 LVYWVDLYLDYV 394
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 137/323 (42%), Gaps = 61/323 (18%)
Query: 69 QDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
Q N C+ G CSQ+C T + + C C GY L+ + +C+ I +FL+ S I
Sbjct: 1833 QGSNSCQLNNGGCSQLCLPTSETTRTCMCTVGYYLQKNRMSCQGIE---SFLMYSVHEGI 1889
Query: 127 LVADLEEKGK----------------DHRAQ-------------------------DIVV 145
LE K D A+ DI+
Sbjct: 1890 RGIPLEPSDKMDALMPISGTSFAVGIDFHAENDTIYWTDMGFNKISRAKRDQTWKEDIIT 1949
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + + P G
Sbjct: 1950 NGLGRVEGIAVDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIAVHPEKGL 2009
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
LFWT+WG+ P I + +DGS + ++S I WPNG+++D ++Y+ D++ D I+
Sbjct: 2010 --LFWTEWGQMPCIGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERI 2067
Query: 266 SLEIKTN------------VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
LE N + + +YW D ++ G N D + + +G
Sbjct: 2068 DLETGGNREMVLSGSNVDMFSVAVFGAYIYWSDRAHANGSVRRGHKN-DATETITMRTGL 2126
Query: 314 LYEALALDLENGMLYYSTLKCTR 336
+ + N + T C R
Sbjct: 2127 GVNLKEVKIFNRVREKGTNVCAR 2149
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 138/328 (42%), Gaps = 74/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSNT--CHPTPLGALCTCPP 57
+C+ + CD DC +G+DE GC +A C+ C + C+ C C P
Sbjct: 3773 KCIPMDLQCDRLDDCGDGSDE-QGCRIAPTEYTCEDNVNPCGDDAYCNQIKTSVFCRCKP 3831
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G + + C+D+NEC G CS C N +GSY C C++ + + N+TC A
Sbjct: 3832 GFQRNMKNRQCEDLNECLVFGTCSHQCINVEGSYKCVCDQNF--QERNNTCIAEGSEDQV 3889
Query: 118 LIISNRHSIL--------------VADLEEKGK-----DHRAQDIVV------------- 145
L I+N IL ++ +E + + +D+++
Sbjct: 3890 LYIANDTDILGFIYPFNYSGDHQQISHIEHNSRITGMDVYYQRDMIIWSTQFNPGGIFYK 3949
Query: 146 -----------SGLDLVE-----GLAYDWIGGHIYWLD-SRLN--------------RIE 174
SGL E +A DW+ G+IYW D SR++ I
Sbjct: 3950 RIHGREKRQANSGLICPEFKRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSIN 4009
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V NG N L + +P + ++P G ++WT G++ IE MDG+ R ++
Sbjct: 4010 VGQLNGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVVGDHSHIEEAAMDGTLRRILVQ 4067
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D + R+Y+AD +L I
Sbjct: 4068 KNLQRPTGLAVDYFSERIYWADFELSII 4095
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 107/240 (44%), Gaps = 55/240 (22%)
Query: 77 PGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA-DLEE 133
PG CS +C +++ + C C G+ L D +CK + R I+ DL
Sbjct: 483 PGGCSHICLLSSSYKTRTCRCRTGFNLGSDGRSCKRPKNELFLFYGKGRPGIVRGMDLNT 542
Query: 134 KGKDH-----------RAQD------------------------------IVVSGLDLVE 152
K D RA D I+ LD VE
Sbjct: 543 KIADEYMIPIENLVNPRALDFHAETNYIYFADTTSFLIGRQKIDGTERETILKDDLDNVE 602
Query: 153 GLAYDWIGGHIYWL-DSRLNRIEVC--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
G+A DWIG ++YW D I V ++ +R L + ++ PRG+++DP G W++
Sbjct: 603 GIAVDWIGNNLYWTNDGHRKTINVARLEKASQSRKTLLEGEMSHPRGIVVDPVNG--WMY 660
Query: 210 WTDWGENP------RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
WTDW E+ RIE+ MDG NR +++K+ WPNGLTLD T +Y+ D+ D I+
Sbjct: 661 WTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTNTLYWCDAYYDHIE 720
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 17/131 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCT 335
+ R LY++D G+ +I N +GS L+ +L+ +A+A+D G L
Sbjct: 293 LTRNLYFVDHVGD----RIFVCNSNGSVCVTLIDLELHNPKAIAVDPIAGKL-------- 340
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
F+TD+G ++ER MDG NR+ II +K P L LD+ + VY+ D LD++
Sbjct: 341 ---FFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVGVV 397
Query: 396 NYDGTGRQQVI 406
+Y G R VI
Sbjct: 398 DYQGKNRHTVI 408
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G N ++ST I PNGLT+D ++YF+D L
Sbjct: 2327 ECQNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGK 2386
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 2387 IERCEYDGSQRHVIV 2401
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 138/310 (44%), Gaps = 39/310 (12%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS MC N S C+C L D TC + FL+ + R I D++
Sbjct: 1538 GPCSHMCLINHNRSAACACPHLMKLSSDKKTCYEMK---KFLLYARRSEIRGVDIDNPYF 1594
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ V +D V + +D +YW D + I+ NGT + +I RG
Sbjct: 1595 NFITA-FTVPDIDDVTVIDFDASEERLYWTDIKTQTIKRAFINGTGLETVISRDIQSIRG 1653
Query: 197 MMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIIS--------------TKIYWPN 241
+ +D +R L+W + + +I +DGS +++II K+YW +
Sbjct: 1654 LAVDWV--SRNLYWISSEFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD 1711
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
G T+++A + ++SK+ F + K + +++Y + KLYWI GNG I + N+
Sbjct: 1712 GNTINMAN--MDGSNSKILFQNQKE-PVGLSIDY--VENKLYWI-SSGNGT---INRCNL 1762
Query: 302 DGSNASILVS--GQLYEALALDLENGMLYYSTLKCTRWLFWTDW-GENPRIERIGMDGSN 358
DG N ++ S +L +A AL + + L+++ + + G NP I R +
Sbjct: 1763 DGGNLEVIESMKEELTKATALTIMDKKLWWADQNLAQLGTCSKRDGRNPTILR-----NK 1817
Query: 359 RSTIISTKIY 368
S ++ K+Y
Sbjct: 1818 TSGVVHMKVY 1827
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 95/224 (42%), Gaps = 33/224 (14%)
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++D L+WTD + I+R ++G+ T+IS I GL +D +R +Y+ S
Sbjct: 1610 VIDFDASEERLYWTDI-KTQTIKRAFINGTGLETVISRDIQSIRGLAVDWVSRNLYWISS 1668
Query: 258 KLDFIDCKSLEIKTNVNYSTIFR--------------KLYWIDEGGNGVPLKIGKANMDG 303
+ D + ++ S I KLYW D GN I ANMDG
Sbjct: 1669 EFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD--GN----TINMANMDG 1722
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
SN+ IL Q E + L ++ Y K L+W G N I R +DG N I
Sbjct: 1723 SNSKILFQNQ-KEPVGLSID-----YVENK----LYWISSG-NGTINRCNLDGGNLEVIE 1771
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
S K L I +++++AD L + C+ GR IL
Sbjct: 1772 SMKEELTKATALTIMDKKLWWADQNLAQLGTCS-KRDGRNPTIL 1814
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 94/242 (38%), Gaps = 58/242 (23%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-----NRIEVCDENGTNR---IVLAKDNIT 192
+ ++V + VEGLAY +YW S + ++ +R I +++D+
Sbjct: 2261 RQVIVENVGSVEGLAYHRAWDTLYWTSSTTSSITRHTVDQTRPGAFDREAVITMSEDD-- 2318
Query: 193 QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
P + LD +FWT+W E +P I R + G N ++ST I PNGLT+D +
Sbjct: 2319 HPHVLALDEC--QNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEK 2376
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+YF+D L KI + DGS ++V
Sbjct: 2377 LYFSDGSLG----------------------------------KIERCEYDGSQRHVIVK 2402
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
L+L + + ++FW+DWG + G + + S + P
Sbjct: 2403 SGPGTFLSLAVYDN-----------YIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPM 2451
Query: 372 GL 373
G+
Sbjct: 2452 GI 2453
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ +V + + GL D+ +Y+ D L +IE C+ +G+ R V+ K G L
Sbjct: 2354 AQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGKIERCEYDGSQRHVIVKSG----PGTFL 2409
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ ++FW+DWG + G + + S + P G+
Sbjct: 2410 SLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGI 2453
>gi|148698822|gb|EDL30769.1| low density lipoprotein receptor-related protein 8, apolipoprotein
e receptor [Mus musculus]
Length = 1016
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/298 (35%), Positives = 154/298 (51%), Gaps = 46/298 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CV+ KVCD + DC + +DE C L EC H G CS+ C +G CTCP G L
Sbjct: 364 CVDGGKVCDDQRDCRDWSDEPQKVCGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL- 422
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D TC D++EC+ P CSQ+C N KG + C C+ GY ++ CKA+ + LI +NR
Sbjct: 423 DQKTCGDIDECQDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAVAGKSPSLIFTNR 482
Query: 124 HSILVADLEEKG--------KDHRAQDIVVS----------------------------- 146
H + DL ++ K+ A D+ V+
Sbjct: 483 HEVRRIDLVKRDYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAHMDKASIPDEQV 542
Query: 147 -----GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
L EGLA DW+ HIYW DS I V +G R L +++PR + +DP
Sbjct: 543 VLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATTDGRRRCTLFSRELSEPRAIAVDP 602
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++W+DWG +IE+ G++G++R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 603 LRG--FMYWSDWGFQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 658
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 176/427 (41%), Gaps = 97/427 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT---CPPGEIL 61
CV K C+ + DCP+G+DE GC L +TC P C C G +
Sbjct: 323 CVLAIKRCNQERDCPDGSDEA-GC----------LQESTCE-GPRRFQCKSGECVDGGKV 370
Query: 62 SNDSVTCQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110
+D C+D +NEC G CS +CT+ K + C+C G+ L D TC
Sbjct: 371 CDDQRDCRDWSDEPQKVCGLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGD 429
Query: 111 INH----SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
I+ A I N + + D + V G + I + +
Sbjct: 430 IDECQDPDACSQICVNYKGYFKCECHPGYE----MDTLTKNCKAVAGKSPSLIFTNRH-- 483
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226
+ RI++ + + I + K+ + LD T ++W D +I MD
Sbjct: 484 --EVRRIDLVKRDYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAHMDK 534
Query: 227 SN----RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
++ + +I +++ P GL +D + + +
Sbjct: 535 ASIPDEQVVLIDEQLHSPEGLAVDW------------------------------VHKHI 564
Query: 283 YWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFW 340
YW D G I A DG L S +L E A+A+D G +Y W
Sbjct: 565 YWTDSGNK----TISVATTDGRRRCTLFSRELSEPRAIAVDPLRGFMY-----------W 609
Query: 341 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
+DWG +IE+ G++G++R T++S I WPNG+TLD+ ++R+Y+ DSKL + +++G
Sbjct: 610 SDWGFQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFNGG 669
Query: 401 GRQQVIL 407
R+ +I
Sbjct: 670 NRKMLIF 676
>gi|16549252|dbj|BAB70786.1| unnamed protein product [Homo sapiens]
Length = 820
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 184/420 (43%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+GK DCP+G+DEG CD EC G CSN C P G +C+CP G L+
Sbjct: 333 CLQPEKLCNGKKDCPDGSDEGYLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLNK 390
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC EG+ L+ D +C +++ AF+I S R
Sbjct: 391 DNKTCEIVDYCSNHLKCSQVCEQHKHTVKCSCYEGWKLDVDGESCTSVDPFEAFIIFSIR 450
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 451 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAIE 510
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 511 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDP 570
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 571 RYGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAR 628
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG+N ++ G Y +
Sbjct: 629 SDAI------------YSALY----------------------DGTNMIEIIRGHEYLSH 654
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 655 PFAVS---LYGSE------VYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYHPS 705
>gi|334321482|ref|XP_003340113.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
[Monodelphis domestica]
Length = 1162
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/345 (33%), Positives = 171/345 (49%), Gaps = 68/345 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
CV + CD + CP+G+DE GC + EC H G CS+ C LG C CPPG E+L
Sbjct: 566 CVPRARRCDREPHCPDGSDEA-GCLQEADECVHNNGGCSHICRDLKLGYACECPPGYELL 624
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH-----SAA 116
D TC D+NEC+ P CSQ+C N KG + C C+ GY ++ TCKA+ ++
Sbjct: 625 --DKKTCGDINECDNPDACSQICINYKGYFKCECHAGYEMDTLAKTCKAVAACPPPGTSP 682
Query: 117 FLIISNRHSILVADLE-----------------------------------------EKG 135
LI +NRH + +L +K
Sbjct: 683 SLIFTNRHEVRRINLGKRDYAPLLPMLKNVVALDVDVAANRLYWCDLFYRKIYGAFIDKA 742
Query: 136 KDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
D Q +++ S L EGLA DW+ H+YW DS I V +G R L ++++P
Sbjct: 743 SDRAEQAVLIDSQLHSPEGLAVDWVHKHLYWTDSGNKTISVATVDGGRRKTLFSHDLSEP 802
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
R + +DP G +++W+DWG+ RIE+ G++G +R ++ I WPNG+TLD+ ++R+Y+
Sbjct: 803 RAIAVDPLHG--FMYWSDWGDQARIEKSGLNGVDRQVLVLDNIEWPNGITLDLLSQRLYW 860
Query: 255 ADSKL------DFIDCKSLEIKTNVNYST------IFR-KLYWID 286
DSKL DF D + +VN + +F K++W D
Sbjct: 861 VDSKLHQLSSIDFNDGNRKVLIFSVNTLSHPFGIAVFEDKVFWTD 905
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 31/186 (16%)
Query: 232 IISTKIYWPNGLTLDIATRRVY--FADSKLD------FIDCKSLEIKTNVNYSTIFRKLY 283
+ + ++YW D+ R++Y F D D ID + L + + + LY
Sbjct: 719 VAANRLYW-----CDLFYRKIYGAFIDKASDRAEQAVLIDSQ-LHSPEGLAVDWVHKHLY 772
Query: 284 WIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWT 341
W D G I A +DG L S L E A+A+D +G +Y W+
Sbjct: 773 WTDSGNK----TISVATVDGGRRKTLFSHDLSEPRAIAVDPLHGFMY-----------WS 817
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
DWG+ RIE+ G++G +R ++ I WPNG+TLD+ ++R+Y+ DSKL + +++
Sbjct: 818 DWGDQARIEKSGLNGVDRQVLVLDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFNDGN 877
Query: 402 RQQVIL 407
R+ +I
Sbjct: 878 RKVLIF 883
>gi|345481629|ref|XP_001605666.2| PREDICTED: low-density lipoprotein receptor-related protein 4-like
[Nasonia vitripennis]
Length = 1996
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 153/306 (50%), Gaps = 47/306 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGA-LCTCPPGEILSN 63
CV++ VCDG DCP DE EC CS C T C+C PG +L+
Sbjct: 571 CVSMKHVCDGVADCPEKDDEENCPKKVECTEN-DHCSQLCVVTSDNQRACSCDPGYVLAK 629
Query: 64 DSVTCQDMNEC--EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL--- 118
D+ TC+D++EC E+ CSQ+C NTKGS++C C GYVL D +CKA+ + L
Sbjct: 630 DNKTCEDIDECKFEKDPVCSQVCKNTKGSFVCECAPGYVLRPDLRSCKALGANPTLLLAN 689
Query: 119 ----------------IISNRHSILVADLEEK--------------------GKDHRAQD 142
++ H+ + D K G D A D
Sbjct: 690 RVDIRQVSITGPKYTSVLKGLHNAIALDYHYKRGLIYWSDVSMDVIRKVYVNGTD--ADD 747
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ GL+ G+A DWI ++W DS R+EV + R VL ++ +PR + + P
Sbjct: 748 FIRWGLESPGGIAIDWIHDLLFWTDSGTRRVEVITLDTRVRHVLVSSDLDKPRAIAVHPH 807
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWG NP+IER MDGS R+ +I+ IYWPNGLT+D T R+Y+ D+K I
Sbjct: 808 YG--YVYWTDWGPNPKIERADMDGSKRTALITDNIYWPNGLTIDYITDRIYWIDAKHRVI 865
Query: 263 DCKSLE 268
+ S+
Sbjct: 866 ESASMR 871
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 41/307 (13%)
Query: 30 LAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKG 89
+ C G CS+ C P +G C CP G + D T C + K
Sbjct: 942 INHCGENNGKCSHMCLPNSMGYSCVCPVGLKIKKDGKT------CAASADNLLLFARKKD 995
Query: 90 SYICSCNEG-----YVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRA---- 140
+ S ++ V+ DN + + A ++ +I D+E +
Sbjct: 996 LRLISLDQSAKAFDIVIPVDN-----VESAVALTWNADDDTIYWTDVEADTISRASIGGT 1050
Query: 141 --QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
Q I+ L+ GLA DWI +YW D+ NRIE + +G+ R +L + + +PR ++
Sbjct: 1051 NQQAIIHHNLESPAGLAMDWITKKLYWTDAGTNRIECSNLDGSMRSLLIYEGLDKPRDIV 1110
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD-- 256
++P G +FW+DWGE P+IER GMDGS+R +IST + WPNGL +D +R+Y+AD
Sbjct: 1111 VNPISGH--MFWSDWGEKPKIERAGMDGSDRRDLISTSLTWPNGLAIDFEEKRLYWADGG 1168
Query: 257 -SKLDFID---------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMD-GSN 305
SK+++ D ++ + K K+YW D + I +A+ D G +
Sbjct: 1169 TSKIEYSDLDGKHRTTIIQAPDTKHPFGLVIHKNKIYWTDWD----TMSIHRADKDTGKS 1224
Query: 306 ASILVSG 312
+++ SG
Sbjct: 1225 VTVIRSG 1231
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 133/299 (44%), Gaps = 31/299 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C G CS+ C P P C CP G IL+ D TC E P M ++
Sbjct: 1252 CSRNNGNCSHLCLLAPAPKRYRCACPTGLILNPDGKTCP-----EMPDKFLLM-SHRIDI 1305
Query: 91 YICSCNEGYVLE-------YDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDI 143
+ S + Y + N + ++ + ++ + + + + + +D
Sbjct: 1306 RVLSLDTNYTADTVLPIGHMKNVSGADVDMETGQIYWTDPGQLFTKVIRKVSFEGKNEDT 1365
Query: 144 VVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
V+ G +D V+ L D IG +YW D LN IEV D +G NR VL + PR + L
Sbjct: 1366 VIDGCIDTVDSLVVDSIGRKLYWTDVGLNSIEVSDLDGKNRKVLVWSGLDNPRAVALHYP 1425
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G LFW+DWG N RIER MDG +R +I+ + WPNGL++D+ R+Y+ D+K I
Sbjct: 1426 AGL--LFWSDWGHNARIERADMDGEHREAVITEGLTWPNGLSIDLFADRIYWNDAKKKVI 1483
Query: 263 DCKSLE----------IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+ L+ ++ + + +YW D + + DG N I++S
Sbjct: 1484 ESSDLQGQDRKVIVEKVEHPYGLAVVGDFIYWSDWQEKAL---LRAKKYDGKNKKIMLS 1539
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 139/337 (41%), Gaps = 93/337 (27%)
Query: 71 MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
+N C E G CS MC Y C C G ++ D TC A + L+ + + + +
Sbjct: 942 INHCGENNGKCSHMCLPNSMGYSCVCPVGLKIKKDGKTCAA--SADNLLLFARKKDLRLI 999
Query: 130 DLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
L++ K A+D IV+ D
Sbjct: 1000 SLDQSAK------------------AFD--------------------------IVIPVD 1015
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
N+ + + T ++WTD E I R + G+N+ II + P GL +D T
Sbjct: 1016 NVESAVALTWNADDDT--IYWTDV-EADTISRASIGGTNQQAIIHHNLESPAGLAMDWIT 1072
Query: 250 RRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL 309
+ KLYW D G N +I +N+DGS S+L
Sbjct: 1073 K------------------------------KLYWTDAGTN----RIECSNLDGSMRSLL 1098
Query: 310 VSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYW 369
+ YE L D ++ + +FW+DWGE P+IER GMDGS+R +IST + W
Sbjct: 1099 I----YEGL--DKPRDIVVNPI---SGHMFWSDWGEKPKIERAGMDGSDRRDLISTSLTW 1149
Query: 370 PNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
PNGL +D +R+Y+AD I++ + DG R +I
Sbjct: 1150 PNGLAIDFEEKRLYWADGGTSKIEYSDLDGKHRTTII 1186
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 118/258 (45%), Gaps = 48/258 (18%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE----- 132
G CS +C Y C+C G ++ D TC + FL+++ + +++ L+
Sbjct: 1566 GGCSHLCLRNPTGYSCACPTGIIINDDKKTCNST--PTNFLLLATKKTLVRMSLDTPEMW 1623
Query: 133 -------------------EKG-----------------KDHRAQDIVVSGLDLVEG--L 154
EK +D +VV GL++ L
Sbjct: 1624 EVPLPVKHYHNAFSVDFHWEKQLIFYTDVDVKVIRRINMRDFSDDKVVVWGLNVSTPFRL 1683
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DW+ ++YW D + IEV +G+ R L +N+ +PR + L P G +++W +WG
Sbjct: 1684 AVDWLADNMYWTDLKHRMIEVSRLDGSCRKKLI-ENLKEPRSLTLFPREG--YIYWAEWG 1740
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
+ PRI R +DGSNR +I+ST + PNGL++D R++Y+AD+ D I+ L + +
Sbjct: 1741 DQPRIGRANLDGSNRKSIVSTDLSLPNGLSIDYVARKLYWADALKDRIEMSDLHGRYRIA 1800
Query: 275 YSTIFRKLYWIDEGGNGV 292
+ + + GN +
Sbjct: 1801 LVPEAVNAFGLSQYGNNI 1818
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 131/335 (39%), Gaps = 100/335 (29%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G CS +C Y C+C G +L D TC + FL++S+R I V L
Sbjct: 1257 GNCSHLCLLAPAPKRYRCACPTGLILNPDGKTCPEM--PDKFLLMSHRIDIRVLSL---- 1310
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D N T VL ++
Sbjct: 1311 -----------------------------------------DTNYTADTVLPIGHMKNVS 1329
Query: 196 GMMLDPSPGTRWLFWTDWGE--NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
G +D G ++WTD G+ I ++ +G N T+I I + L +D
Sbjct: 1330 GADVDMETGQ--IYWTDPGQLFTKVIRKVSFEGKNEDTVIDGCIDTVDSLVVD------- 1380
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+I RKLYW D G N + + +++DG N +LV
Sbjct: 1381 -----------------------SIGRKLYWTDVGLNSIEV----SDLDGKNRKVLVWSG 1413
Query: 314 L--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
L A+AL G+L FW+DWG N RIER MDG +R +I+ + WPN
Sbjct: 1414 LDNPRAVALHYPAGLL-----------FWSDWGHNARIERADMDGEHREAVITEGLTWPN 1462
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
GL++D+ R+Y+ D+K I+ + G R+ ++
Sbjct: 1463 GLSIDLFADRIYWNDAKKKVIESSDLQGQDRKVIV 1497
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 89/179 (49%), Gaps = 15/179 (8%)
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI 296
IYW + +++D+ R+VY + D LE + I L+W D G V +
Sbjct: 725 IYWSD-VSMDV-IRKVYVNGTDADDFIRWGLESPGGIAIDWIHDLLFWTDSGTRRVEV-- 780
Query: 297 GKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG 356
+D +LVS L + A+ + Y ++WTDWG NP+IER MDG
Sbjct: 781 --ITLDTRVRHVLVSSDLDKPRAIAVHPHYGY---------VYWTDWGPNPKIERADMDG 829
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFT 415
S R+ +I+ IYWPNGLT+D T R+Y+ D+K I+ + G R++V+ L F
Sbjct: 830 SKRTALITDNIYWPNGLTIDYITDRIYWIDAKHRVIESASMRGDDRKKVVTRGLHHPFA 888
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 29/208 (13%)
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTL--DIATRRVYFADSKLDFIDCKSLEIKTN 272
+ P + + + + S +W L D+ + + + + DF D K + N
Sbjct: 1618 DTPEMWEVPLPVKHYHNAFSVDFHWEKQLIFYTDVDVKVIRRINMR-DFSDDKVVVWGLN 1676
Query: 273 VNYSTIFR--------KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
V ST FR +YW D + + + +DGS L+ L E +L L
Sbjct: 1677 V--STPFRLAVDWLADNMYWTDLKHRMIEV----SRLDGSCRKKLIE-NLKEPRSLTL-- 1727
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384
+++W +WG+ PRI R +DGSNR +I+ST + PNGL++D R++Y+
Sbjct: 1728 -------FPREGYIYWAEWGDQPRIGRANLDGSNRKSIVSTDLSLPNGLSIDYVARKLYW 1780
Query: 385 ADSKLDFIDFCNYDGTGRQQVILIDLMV 412
AD+ D I+ D GR ++ L+ V
Sbjct: 1781 ADALKDRIEMS--DLHGRYRIALVPEAV 1806
>gi|449268218|gb|EMC79088.1| Low-density lipoprotein receptor-related protein 8, partial
[Columba livia]
Length = 856
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 155/304 (50%), Gaps = 47/304 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ KVCD DC + +DE C + EC G CS+ C +G C C PG L
Sbjct: 261 ECIDGGKVCDSHRDCRDWSDEPLKECGINECSMNNGGCSHICKDLKIGYECECLPGYKLL 320
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG Y C C EGY ++ + CKA+ S +LI +N
Sbjct: 321 -DKKTCGDIDECENPDACSQICINYKGDYKCECYEGYEMDTLSKNCKAVGKS-PYLIFTN 378
Query: 123 RHSILVADLE-----------------------------------------EKGKDHRAQ 141
RH + DL +K D Q
Sbjct: 379 RHEVRKIDLVKRDYSRIIPMLKNVVALDVEVATNRIYWCDLFYRKIYSAYIDKASDTAEQ 438
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
I++ S L+ EGLA DW+ +IYW DS I V +G+ R L ++++PR + +D
Sbjct: 439 VILIDSQLNSPEGLAIDWVHKNIYWTDSGNKTISVATADGSRRRTLFNRDLSEPRAIAVD 498
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ R+++W+DWG+ +IE+ G++G R +++ I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 499 PT--RRFMYWSDWGDKAKIEKAGLNGMGRQVLVTDNIEWPNGITLDLLNQRLYWVDSKLH 556
Query: 261 FIDC 264
+ C
Sbjct: 557 SLSC 560
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 180/447 (40%), Gaps = 79/447 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC---DLAECKHKFGLCSNTCHPTPLGALC-TCPPGEI 60
C++ K CD DCP+ +DE GC E KF S C G +C +
Sbjct: 221 CIHGAKQCDKVHDCPDNSDEA-GCIQESACESPSKFQCKSGEC--IDGGKVCDSHRDCRD 277
Query: 61 LSNDSVTCQDMNECE-QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI 119
S++ + +NEC G CS +C + K Y C C GY L D TC I+
Sbjct: 278 WSDEPLKECGINECSMNNGGCSHICKDLKIGYECECLPGYKL-LDKKTCGDIDECENPDA 336
Query: 120 ISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDEN 179
S D + + + D + V Y I+ + +I++ +
Sbjct: 337 CSQICINYKGDYKCECYEGYEMDTLSKNCKAVGKSPY-----LIFTNRHEVRKIDLVKRD 391
Query: 180 GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE----NPRIERIGMDGSNRSTIIST 235
+ I + K+ + LD T ++W D + I++ D + + +I +
Sbjct: 392 YSRIIPMLKNVVA------LDVEVATNRIYWCDLFYRKIYSAYIDK-ASDTAEQVILIDS 444
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
++ P GL +D + + +YW D G + +
Sbjct: 445 QLNSPEGLAIDW------------------------------VHKNIYWTDSGNKTISV- 473
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A DGS L + L E A+ ++ R+++W+DWG+ +IE+ G++
Sbjct: 474 ---ATADGSRRRTLFNRDLSEPRAIAVDPTR---------RFMYWSDWGDKAKIEKAGLN 521
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFT 415
G R +++ I WPNG+TLD+ +R+Y+ DSKL + + +G+ R+ +++
Sbjct: 522 GMGRQVLVTDNIEWPNGITLDLLNQRLYWVDSKLHSLSCIDVNGSNRK------VLISSA 575
Query: 416 NDLMGDNGVPALA-----LDLENGMLY 437
+DL G+ DLEN ++
Sbjct: 576 DDLSHPFGLAVFEDRVFWTDLENEAIF 602
>gi|281346317|gb|EFB21901.1| hypothetical protein PANDA_004060 [Ailuropoda melanoleuca]
Length = 1389
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 183/420 (43%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+G+ DCP+G+DEG CD EC G CSN C P G +C+CP G L+
Sbjct: 268 CLQPEKLCNGRRDCPDGSDEGDLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPQGLQLNK 325
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC EG+ L+ D +C +++ AF+I S R
Sbjct: 326 DNKTCEIIDYCSNHLKCSQVCEQHKHTVKCSCYEGWKLDVDGESCTSVDPFEAFIIFSIR 385
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 386 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAVE 445
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 446 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDP 505
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 506 RYGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAR 563
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG+ ++ G Y +
Sbjct: 564 SDAI------------YSALY----------------------DGTAMIEIIRGHEYLSH 589
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 590 PFAVS---LYGSE------VYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYHPS 640
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 125/284 (44%), Gaps = 60/284 (21%)
Query: 72 NECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
N C+ G CSQ+C T + + C C GY L+ + +C+ I +FL+ S I
Sbjct: 958 NSCQLNNGGCSQLCLPTSETTRTCMCTVGYYLQKNRMSCQGIE---SFLMYSVHEGIRGI 1014
Query: 130 DLEEKGK----------------DHRAQ-------------------------DIVVSGL 148
LE K D A+ DI+ +GL
Sbjct: 1015 PLEPSDKMDALMPISGTSFAVGIDFHAENDTIYWTDMGFNKISRAKRDQTWKEDIITNGL 1074
Query: 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + + P G +L
Sbjct: 1075 GRVEGIAIDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIAVHPEKG--YL 1132
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
FWT+WG+ P I + +DGS + ++S I WPNG+++D ++Y+ D++ D I+ LE
Sbjct: 1133 FWTEWGQMPCIGKARLDGSEKVILVSMGIAWPNGISIDYEEHKLYWCDARTDKIERIDLE 1192
Query: 269 IKTN------------VNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
N + + +YW D ++ G N
Sbjct: 1193 TGGNREMVLSGSNVDMFSVAVFGAYIYWSDRAHANGSIRRGHKN 1236
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 138/310 (44%), Gaps = 39/310 (12%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS MC N S C+C L D TC + FL+ + R I D++
Sbjct: 656 GPCSHMCLINHNRSAACACPHLMKLSSDKKTCYEMK---KFLLYARRSEIRGVDIDNPYF 712
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ V +D V + +D +YW D + I+ NGT + +I RG
Sbjct: 713 NFITA-FTVPDIDDVTVIDFDASEERLYWTDIKTQTIKRAFINGTGLETVISRDIQSIRG 771
Query: 197 MMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIIS--------------TKIYWPN 241
+ +D +R L+W + + +I +DGS +++II K+YW +
Sbjct: 772 LAVDWV--SRNLYWVSSEFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD 829
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
G T+++A + ++SK+ F + K + +++Y + KLYWI GNG I + N+
Sbjct: 830 GNTINMAN--MDGSNSKILFQNQKE-PVGLSIDY--VENKLYWI-SSGNGT---INRCNL 880
Query: 302 DGSNASILVS--GQLYEALALDLENGMLYYSTLKCTRWLFWTDW-GENPRIERIGMDGSN 358
DG N ++ S +L +A AL + + L+++ + + G NP + R +
Sbjct: 881 DGGNLEVIESMKEELTKATALTIMDKKLWWADQNLAQLGTCSKRDGRNPTVLR-----NK 935
Query: 359 RSTIISTKIY 368
S ++ K+Y
Sbjct: 936 TSGVVHMKVY 945
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 96/224 (42%), Gaps = 33/224 (14%)
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++D L+WTD + I+R ++G+ T+IS I GL +D +R +Y+ S
Sbjct: 728 VIDFDASEERLYWTDI-KTQTIKRAFINGTGLETVISRDIQSIRGLAVDWVSRNLYWVSS 786
Query: 258 KLDFIDCKSLEIKTNVNYSTIFR--------------KLYWIDEGGNGVPLKIGKANMDG 303
+ D + ++ S I KLYW D GN + + ANMDG
Sbjct: 787 EFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD--GNTINM----ANMDG 840
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
SN+ IL Q E + L ++ Y K L+W G N I R +DG N I
Sbjct: 841 SNSKILFQNQ-KEPVGLSID-----YVENK----LYWISSG-NGTINRCNLDGGNLEVIE 889
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
S K L I +++++AD L + C+ GR +L
Sbjct: 890 SMKEELTKATALTIMDKKLWWADQNLAQLGTCS-KRDGRNPTVL 932
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 26/157 (16%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD + +L L+WTD E+ RI R +
Sbjct: 387 EIRRIDLHKRDYSLLVPG-LRNTIALDFH----FNQSL-----LYWTDVVED-RIYRGKL 435
Query: 355 DGSNR----STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
S ++ + P GLT+D +Y+ DS LD I+ DG+ R LI
Sbjct: 436 SESGGVSAVEVVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLR--TTLIAG 493
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
+E A+ALD G+L+++ A F +
Sbjct: 494 AMEHPR---------AIALDPRYGILFWTDWDANFPR 521
>gi|417414461|gb|JAA53523.1| Putative low-density lipoprotein receptor, partial [Desmodus
rotundus]
Length = 2645
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 167/320 (52%), Gaps = 59/320 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCD--LAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV ++++C+G DC +G+DEGP C L+ C + G C + C PT G C C L
Sbjct: 85 CVPMSRLCNGVQDCLDGSDEGPHCRELLSNCS-QLG-CQHHCVPTLNGPTCYCNSSFQLQ 142
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLI 119
D TC+D +EC G CSQ+CTNT GS+ C C EGY+L+ DN +CKA N L+
Sbjct: 143 TDGKTCKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPVLL 202
Query: 120 ISNRHSIL------------------------------------VADLEEKGK------- 136
I+N +IL V D + +
Sbjct: 203 IANSQNILATYLNGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDSAAQTQLKCARMP 262
Query: 137 ------DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
D +I +S L VE +A DW+ G+ Y++D +RI VC+ NG + L
Sbjct: 263 GLKGFVDEHTINISLS-LHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLE 321
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R
Sbjct: 322 LYNPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSR 379
Query: 251 RVYFADSKLDFIDCKSLEIK 270
VY+AD+ LD+I+ E K
Sbjct: 380 LVYWADAYLDYIEVVDYEGK 399
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 155/304 (50%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1159 CLPPDKLCDGNDDCSDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1216
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1217 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1276
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1277 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1336
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1337 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1396
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R TI + WPNGLT+D +R+ + D++
Sbjct: 1397 RDGI--LFWTDWDASLPRIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDAR 1454
Query: 259 LDFI 262
D I
Sbjct: 1455 SDAI 1458
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 168/431 (38%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1855 GDCSQLCLPTSESTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1911
Query: 137 ----------------DHRAQ-------------------------DIVVSGLDLVEGLA 155
D A+ D+V +G+ VEG+A
Sbjct: 1912 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1971
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1972 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2029
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 2030 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGENREV 2089
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2090 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFN 2149
Query: 298 KANMDGSNASILVSGQ-----LYEA---LALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N +G LY A +GML C + + + E +
Sbjct: 2150 RDRQKGTNICAAANGGCQQLCLYRGNGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 2209
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2210 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2268
Query: 396 NYDGTGRQQVI 406
N DGTGR ++
Sbjct: 2269 NDDGTGRITIV 2279
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 485 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 543
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 544 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 603
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 604 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 661
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 662 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 721
Query: 261 FID 263
I+
Sbjct: 722 RIE 724
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 75/125 (60%), Gaps = 13/125 (10%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 294 FYFVDD----IDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAMGK---------VFFT 340
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 341 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 400
Query: 402 RQQVI 406
RQ +I
Sbjct: 401 RQTII 405
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 133/337 (39%), Gaps = 62/337 (18%)
Query: 72 NECEQ---PGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL 127
N CE G CS +C N + C+C L DN TC FL+ + + I
Sbjct: 1538 NPCEANGGRGPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYEFK---KFLLYARQMEIR 1594
Query: 128 VADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
DL+ ++ V +D V L YD +YW D R I+ NGT +
Sbjct: 1595 GVDLDAPYYNYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVV 1653
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLD 246
++ G+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1654 SADLPNAHGLAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV- 1709
Query: 247 IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
I KLYW D G N I ANMDGSN
Sbjct: 1710 -----------------------------HPIRGKLYWTD-GDN-----ISMANMDGSNR 1734
Query: 307 SILVSGQLYE-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
++L SGQ LA+D LY W G N I R +DGS I +
Sbjct: 1735 TLLFSGQKGPVGLAIDFPESKLY-----------WVSSG-NHTINRCNLDGSGLEIIDTM 1782
Query: 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCN-YDGTG 401
+ L I ++++AD + + CN DG+G
Sbjct: 1783 RNQLGKATALAIMGDKLWWADQVSEKMGTCNKADGSG 1819
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2341 ECQNLMFWTNWNEQHPSIMRAALSGANALTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2400
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2401 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2431
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI--EVCDENGT-- 181
I ++++ D + +V + VEGLAY +YW + I D+ T
Sbjct: 2260 IHFGNIQQINDDGTGRITIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRTGA 2319
Query: 182 --NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
V+ PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2320 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANALTLIEKDIR 2377
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2378 TPNGLAIDHRAEKLYFSDATLDKIE 2402
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 95/213 (44%), Gaps = 29/213 (13%)
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
++YW + T A +R + + ++ + L + + R L+W N +
Sbjct: 1628 RVYWSDVRTQ--AIKRAFINGTGVETVVSADLPNAHGLAVDWVSRNLFWTSYDTNKKQIN 1685
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
+ A +DGS + +V G L+ +G++ + L+WTD G+N I MD
Sbjct: 1686 V--ARLDGSFKNAVVQG-------LEQPHGLVVHPIRG---KLYWTD-GDN--ISMANMD 1730
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFT 415
GSNR+ + S + P GL +D ++Y+ S I+ CN DG+G + +
Sbjct: 1731 GSNRTLLFSGQ-KGPVGLAIDFPESKLYWVSSGNHTINRCNLDGSGLEII---------- 1779
Query: 416 NDLMGDNGVPALALDLENGMLYYSTEGAEFLKT 448
D M + A AL + L+++ + +E + T
Sbjct: 1780 -DTMRNQLGKATALAIMGDKLWWADQVSEKMGT 1811
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Query: 112 NHSAAFLIISNRHSILVADLEEKGKD-HRAQDIVVSGLDLVE-------GLAYDWIGGHI 163
+H AF++ ++ + + E+ RA + L L+E GLA D +
Sbjct: 2332 DHPRAFVLDECQNLMFWTNWNEQHPSIMRAALSGANALTLIEKDIRTPNGLAIDHRAEKL 2391
Query: 164 YWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTDW
Sbjct: 2392 YFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTDW 2437
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1278 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1327
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1328 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1378
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1379 ---TTLLAGDIEHPRAIALDPRDGILFWT 1404
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 17/121 (14%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 679 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 738
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIER--------IGMDGSNRSTIISTKI 237
+ G+ + +LFWT++ G R+ER + + S R I ++
Sbjct: 739 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLERGTGGAPPTVTLLRSERPPIFEIRM 794
Query: 238 Y 238
Y
Sbjct: 795 Y 795
>gi|149035744|gb|EDL90425.1| low density lipoprotein receptor-related protein 8, apolipoprotein
e receptor (predicted) [Rattus norvegicus]
Length = 1019
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 154/298 (51%), Gaps = 46/298 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CV+ KVCD + DC + +DE C L EC H G CS+ C +G CTCP G L
Sbjct: 347 CVDGGKVCDDQRDCRDWSDEPQKVCGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL- 405
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D TC D++EC+ P CSQ+C N KG + C C+ GY ++ CKA+ + LI +NR
Sbjct: 406 DQKTCGDIDECQDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAVAGRSPSLIFTNR 465
Query: 124 HSILVADLEEKG--------KDHRAQDIVV------------------------------ 145
H + DL ++ K+ A D+ V
Sbjct: 466 HEVRRIDLVKRDYSRLIPMLKNVVALDVEVDTNRIYWCDLSYRKIYSAHMDKASIPDEQV 525
Query: 146 ----SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
L EGLA DW+ HIYW DS + V +G R L ++++PR + +DP
Sbjct: 526 VLIGEQLHSPEGLAVDWVHKHIYWTDSGNKTVSVATTDGRRRCTLFNRDLSEPRAIAVDP 585
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++W+DWG +IE+ G++G++R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 586 LRG--FMYWSDWGFQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 641
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 175/427 (40%), Gaps = 97/427 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT---CPPGEIL 61
C+ K C+ + DC +G+DE GC L +TC P C C G +
Sbjct: 306 CILAIKRCNQERDCLDGSDEA-GC----------LQESTCE-GPRRFQCKSGECVDGGKV 353
Query: 62 SNDSVTCQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110
+D C+D +NEC G CS +CT+ K + C+C G+ L D TC
Sbjct: 354 CDDQRDCRDWSDEPQKVCGLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGD 412
Query: 111 INH----SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
I+ A I N + + D + V G + I + +
Sbjct: 413 IDECQDPDACSQICVNYKGYFKCECHPGYE----MDTLTKNCKAVAGRSPSLIFTNRH-- 466
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226
+ RI++ + + I + K+ + LD T ++W D +I MD
Sbjct: 467 --EVRRIDLVKRDYSRLIPMLKNVVA------LDVEVDTNRIYWCDLSYR-KIYSAHMDK 517
Query: 227 SN----RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
++ + +I +++ P GL +D + + +
Sbjct: 518 ASIPDEQVVLIGEQLHSPEGLAVDW------------------------------VHKHI 547
Query: 283 YWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFW 340
YW D G V + A DG L + L E A+A+D G +Y W
Sbjct: 548 YWTDSGNKTVSV----ATTDGRRRCTLFNRDLSEPRAIAVDPLRGFMY-----------W 592
Query: 341 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
+DWG +IE+ G++G++R T++S I WPNG+TLD+ ++R+Y+ DSKL + +++G
Sbjct: 593 SDWGFQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFNGG 652
Query: 401 GRQQVIL 407
R+ +I
Sbjct: 653 NRKMLIF 659
>gi|321459730|gb|EFX70780.1| hypothetical protein DAPPUDRAFT_327801 [Daphnia pulex]
Length = 1830
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 112/305 (36%), Positives = 149/305 (48%), Gaps = 43/305 (14%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLG-ALCTCPPGEIL 61
D CV ++VC+G+ DCP G DE EC C +TC G C C G L
Sbjct: 307 DTCVGFSRVCNGERDCPGGEDEFDCTIQKECD-AGSRCQHTCLVLSNGTGACGCRSGFRL 365
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
++D V C D++EC YCSQ+CTNT G + CSC +GYVL D +CKA+ LI +
Sbjct: 366 TSDGVNCVDVDECATETYCSQLCTNTVGGFSCSCVDGYVLRPDKSSCKALGQPVR-LIFA 424
Query: 122 NRHSILVADLEEKGKD-------------------------------HRAQ-------DI 143
NR I L E+ RA D
Sbjct: 425 NRVDIRQVSLFEEEYTSVIDGLQNAIALDFHYRKGLVIWSDVTLDAIKRAHLNGTAMPDA 484
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
V GL G+A DWI ++YW DS + RIEV +GT R L +N+ +PR + + P
Sbjct: 485 VWWGLKSPGGVAVDWIHDNLYWTDSGVRRIEVSLLDGTMRRTLVWENVEKPRAIAV--HP 542
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G + WTDWG PRIER MDGSNR +++ + WPNGLT+D +Y+AD+K I+
Sbjct: 543 GAAAVIWTDWGHQPRIERSDMDGSNRQILVTENLVWPNGLTIDYTVDHIYWADAKHHVIE 602
Query: 264 CKSLE 268
L+
Sbjct: 603 SVRLD 607
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 158/384 (41%), Gaps = 70/384 (18%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C G CS+ C P C CPPG ++++ + TC QPG ++
Sbjct: 680 RCGSNRGGCSHLCLPNRSSYTCACPPGLQLITPNGRTCT-----SQPGELLIFAQKSELR 734
Query: 91 YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH------RAQDIV 144
G V T + + A +I D+E + Q +V
Sbjct: 735 LFPLNVSGEVDHVLPLT--GVRSAVALDWDGASQTIFWTDVESDVINRAFWNGSNQQTLV 792
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ L+ GLA DW+ +YW D+ NRIEV + +GT R +L D + +PR +++DP G
Sbjct: 793 ANDLESPAGLAVDWVTKKLYWTDAGTNRIEVSNLDGTLRSLLIWDGLDRPRDIVVDPIGG 852
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
+++WTDWG+ P+IER GMDGS RS I+ + + WPNGL +D R+Y+AD
Sbjct: 853 --YMYWTDWGQTPKIERAGMDGSQRSVIVISNLTWPNGLAIDHEGERLYWAD-------- 902
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
G I A++DG N ++L+ +L L L
Sbjct: 903 --------------------------GGTKAIEYASLDGKNRTVLIGAELPHPFGLALYE 936
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384
+FW+DW + I + R T+I + + D+ RVY
Sbjct: 937 NQ-----------IFWSDW-DTAAIHSTDKLNAKRRTMIRSGLD-------DLMDVRVYH 977
Query: 385 ADSKLDFIDFCNYDGTGRQQVILI 408
++ + C G + L+
Sbjct: 978 SN-RYSVPSLCQSHNGGCSHLCLL 1000
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 131/275 (47%), Gaps = 29/275 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C+ G CS+ C P P G C CP G LS D TC+ Q S + +
Sbjct: 987 CQSHNGGCSHLCLLAPLPAGHSCACPTGIKLSADRRTCR------QSPSTSLIFSQRSNL 1040
Query: 91 YICSCNEGYVLEY-------DNHTCKAINHSAAFLIISNR-HSILVADLEEKGKDHRAQD 142
S + Y+++ N ++ L+ S+ + L A +
Sbjct: 1041 RRMSLDMPYLIDVVLDLPPQKNVVALDVDRVTGHLLWSDTTQDKIFRALPGGPLSASAVE 1100
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDP 201
++ LD VEGLA D I +YW D+ + +EV + E+G +R VL + +PRG++L
Sbjct: 1101 VIAFNLDTVEGLAVDEINRKLYWTDAGRSSLEVAELEDGGHRKVLIWTLMDKPRGLVLSH 1160
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
S GT LFW DWG+ PRIE+ MDG NR ++ST + WPN LT+D A +Y+ D++
Sbjct: 1161 STGT--LFWADWGKQPRIEQADMDGRNRKVMVSTDLGWPNSLTIDYAANMLYWTDARKKT 1218
Query: 262 IDCKSL------EIKTNVNY----STIFRKLYWID 286
I+ L E+ T +++ + + LYW D
Sbjct: 1219 IESCDLSGLHRREVLTGLSHPYGITVLDSYLYWTD 1253
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 143/300 (47%), Gaps = 33/300 (11%)
Query: 33 CKHKFGLCSNTCHPTPLGA--LCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C G CS+ C +P G C+CP G ++S D TC QP S + T+ +
Sbjct: 1296 CGTNNGGCSHLCLRSPWGRGYSCSCPTGILMSADGSTC-------QPSPNSFLLYATRNT 1348
Query: 91 YICSCNEGYVLEYDNH-TCKAINHSAAFLIISNRHSILVADLEE---KGKDHR----AQD 142
+ S + ++D ++++ R D+ + D R +
Sbjct: 1349 -LSSISLDTADQWDVALNVPGVHNAIGVDFHWGRQRFYYTDVYLDVIRSVDARNVSNVET 1407
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V S L +GLA DW+ ++YW D+ N +E +GTNR ++ + +PR + + P
Sbjct: 1408 LVSSNLTTPDGLAVDWLADNLYWTDAGRNVLEASRLDGTNRKIIIGSGLDEPRAVAVFPQ 1467
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G L+WTDWG++ +IER +DGS+R I+++++ WPNGL +D +R+Y+AD++LD I
Sbjct: 1468 RGL--LYWTDWGQSHKIERSFLDGSHRVAIVTSELGWPNGLAIDYEGQRLYWADAQLDRI 1525
Query: 263 DCKSLEIKTNVN----------YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+ L + V + + LYW D + ++ KA G S+L G
Sbjct: 1526 ETSDLSGRFRVQLVQGATHPFGLTQLGGFLYWTDWRSKSIE-RVDKAT--GKQRSVLRHG 1582
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 136/340 (40%), Gaps = 98/340 (28%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C + SY C+C G L N TC + LI + + + + L G+
Sbjct: 686 GGCSHLCLPNRSSYTCACPPGLQLITPNGRTCTS--QPGELLIFAQKSELRLFPLNVSGE 743
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
D V+ + +A DW G
Sbjct: 744 ----VDHVLPLTGVRSAVALDWDGA----------------------------------- 764
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
++ +FWTD E+ I R +GSN+ T+++ + P GL +D T+
Sbjct: 765 --------SQTIFWTD-VESDVINRAFWNGSNQQTLVANDLESPAGLAVDWVTK------ 809
Query: 257 SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE 316
KLYW D G N +I +N+DG+ S+L+ L
Sbjct: 810 ------------------------KLYWTDAGTN----RIEVSNLDGTLRSLLIWDGLDR 841
Query: 317 A--LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
+ +D G +Y WTDWG+ P+IER GMDGS RS I+ + + WPNGL
Sbjct: 842 PRDIVVDPIGGYMY-----------WTDWGQTPKIERAGMDGSQRSVIVISNLTWPNGLA 890
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
+D R+Y+AD I++ + DG R +I +L F
Sbjct: 891 IDHEGERLYWADGGTKAIEYASLDGKNRTVLIGAELPHPF 930
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 243 LTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMD 302
+TLD A +R + + + L+ V I LYW D G + + + +D
Sbjct: 466 VTLD-AIKRAHLNGTAMPDAVWWGLKSPGGVAVDWIHDNLYWTDSGVRRIEVSL----LD 520
Query: 303 GSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
G+ LV + + A+ + G + WTDWG PRIER MDGSNR +
Sbjct: 521 GTMRRTLVWENVEKPRAIAVHPGAAA---------VIWTDWGHQPRIERSDMDGSNRQIL 571
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
++ + WPNGLT+D +Y+AD+K I+ DGTGR++V+ L F + D+
Sbjct: 572 VTENLVWPNGLTIDYTVDHIYWADAKHHVIESVRLDGTGRRRVMERGLPHPFAITIFEDS 631
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 112/231 (48%), Gaps = 41/231 (17%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI--ATRRVY 253
G PSP + L+ T + I +D +++ + N + +D +R Y
Sbjct: 1330 GSTCQPSPNSFLLYAT----RNTLSSISLDTADQWDVALNVPGVHNAIGVDFHWGRQRFY 1385
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRK----------------LYWIDEGGNGVPLKIG 297
+ D LD I +S++ + N T+ LYW D G N +
Sbjct: 1386 YTDVYLDVI--RSVDARNVSNVETLVSSNLTTPDGLAVDWLADNLYWTDAGRN----VLE 1439
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
+ +DG+N I++ L E A+A+ + G+LY WTDWG++ +IER +D
Sbjct: 1440 ASRLDGTNRKIIIGSGLDEPRAVAVFPQRGLLY-----------WTDWGQSHKIERSFLD 1488
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
GS+R I+++++ WPNGL +D +R+Y+AD++LD I+ + G R Q++
Sbjct: 1489 GSHRVAIVTSELGWPNGLAIDYEGQRLYWADAQLDRIETSDLSGRFRVQLV 1539
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 73/129 (56%), Gaps = 12/129 (9%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRW 337
I RKLYW D G + L++ + DG + +L+ + + L +L +ST
Sbjct: 1117 INRKLYWTDAGRSS--LEVAELE-DGGHRKVLIWTLMDKPRGL-----VLSHSTGT---- 1164
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
LFW DWG+ PRIE+ MDG NR ++ST + WPN LT+D A +Y+ D++ I+ C+
Sbjct: 1165 LFWADWGKQPRIEQADMDGRNRKVMVSTDLGWPNSLTIDYAANMLYWTDARKKTIESCDL 1224
Query: 398 DGTGRQQVI 406
G R++V+
Sbjct: 1225 SGLHRREVL 1233
>gi|260815491|ref|XP_002602506.1| hypothetical protein BRAFLDRAFT_227282 [Branchiostoma floridae]
gi|229287817|gb|EEN58518.1| hypothetical protein BRAFLDRAFT_227282 [Branchiostoma floridae]
Length = 778
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 157/308 (50%), Gaps = 50/308 (16%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPG---CDLAECKHKFGLCSNTCHPTPLGALCTCPP 57
V ++C+ +KVCDG DC +G+DE PG C++ EC G C C TP CTC
Sbjct: 262 VREKCIPFSKVCDGNDDCSDGSDE-PGQHVCNVDECAVNNGSCMEGCVNTPHSYYCTCND 320
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L +D TC+D +EC G CSQ+C NT G Y C C +GY L+ N CKA A
Sbjct: 321 GFDLQDDGRTCKDKDECAIFGTCSQLCENTHGGYKCECVDGYTLDPRNGYCKADGEEAK- 379
Query: 118 LIISNRHSI------------LVADL------------------------------EEKG 135
LI +NR + LV+DL E
Sbjct: 380 LIFANRRDLRMIDMATGEYTELVSDLRSAIATDVDVPNKRVYWTDVAREQIYSAPIEADS 439
Query: 136 KDHRAQDIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
R++ +VS G+ +G+A DWI +YW D+ + I V +G R L ++ +P
Sbjct: 440 NGERSKVRLVSEGIHTPDGVAIDWIHAKMYWTDTGTDTISVATLDGNMRKTLFATDLDEP 499
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
R + LDP+ G +++W+DWG+ +IER GM+G R ++ + I WPNGLTLD+ +R+Y+
Sbjct: 500 RALALDPTEG--FMYWSDWGQPAKIERAGMNGFFREVLVQSNIEWPNGLTLDLLGKRIYW 557
Query: 255 ADSKLDFI 262
D+KL I
Sbjct: 558 VDAKLHTI 565
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 80/211 (37%), Gaps = 22/211 (10%)
Query: 241 NGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDE-----GGNGVPLK 295
+G L R D F C L T+ Y Y +D +G K
Sbjct: 320 DGFDLQDDGRTCKDKDECAIFGTCSQLCENTHGGYKCECVDGYTLDPRNGYCKADGEEAK 379
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE----NPRIER 351
+ AN + +G+ Y L DL + + + R ++WTD + IE
Sbjct: 380 LIFANRRDLRMIDMATGE-YTELVSDLRSAIATDVDVPNKR-VYWTDVAREQIYSAPIEA 437
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
++ ++S I+ P+G+ +D ++Y+ D+ D I DG R+ + DL
Sbjct: 438 DSNGERSKVRLVSEGIHTPDGVAIDWIHAKMYWTDTGTDTISVATLDGNMRKTLFATDL- 496
Query: 412 VEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ ALALD G +Y+S G
Sbjct: 497 ----------DEPRALALDPTEGFMYWSDWG 517
>gi|335288150|ref|XP_003126347.2| PREDICTED: prolow-density lipoprotein receptor-related protein
1-like [Sus scrofa]
Length = 1598
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 125/371 (33%), Positives = 174/371 (46%), Gaps = 91/371 (24%)
Query: 53 CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEY-DNHTCKAI 111
C C PG L +D TC D++EC CSQ C NT GSY C C EGY D H+CKA+
Sbjct: 19 CRCRPGFRLKDDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAV 78
Query: 112 NHSAAFLIISNRHSILVADLEEKGK---------------DHRAQ-----DIVV------ 145
FLI +NR+ + +L+ D+R Q D+
Sbjct: 79 TDEEPFLIFANRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIR 138
Query: 146 --------------SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI 191
+GL +GLA DW+GG++YW D + IEV NG R VL +
Sbjct: 139 RMHLNGSNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGL 198
Query: 192 TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
+PR +++D G +L+WTDWG++ I RIGMDGS RS I+ TKI WPNGLTLD T R
Sbjct: 199 REPRALVVDVQNG--YLYWTDWGDHSLIGRIGMDGSGRSVIVDTKITWPNGLTLDYVTER 256
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+Y+AD++ D+I+ A++DGSN +++S
Sbjct: 257 IYWADAREDYIE----------------------------------FASLDGSNRHVVLS 282
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWP 370
+ AL L +Y WTDW E I R G+N++ +IST ++ P
Sbjct: 283 QDIPHIFALTLFEDYVY-----------WTDW-ETKSINRAHKTTGTNKTLLIST-LHRP 329
Query: 371 NGLTLDIATRR 381
L + A R+
Sbjct: 330 MDLHVFHALRQ 340
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 85/148 (57%), Gaps = 10/148 (6%)
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
AA SNRH + ++G H + +SGL + G+A DW+ G++YW DS + IE
Sbjct: 986 AAPPTTSNRHRRQI----DRGVTH----LNISGLKMPRGIAIDWVAGNVYWTDSGRDVIE 1037
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V G NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++
Sbjct: 1038 VAQMKGENRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQ 1095
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
I WP GL +D R+Y+AD+KL I
Sbjct: 1096 DNIQWPTGLAVDYHNERLYWADAKLSVI 1123
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 30/184 (16%)
Query: 232 IISTKIYWPNGLTLDIATRRVYFA-------------DSKLDFIDCKSLEIKTNVNYSTI 278
+ + ++YW N T I+ R + A D + ++ L++ + +
Sbjct: 963 VKAGRVYWTNWHTGTISFRSLPPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWV 1022
Query: 279 FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTR 336
+YW D G + + + A M G N L+SG + E A+ +D G +Y
Sbjct: 1023 AGNVYWTDSGRDVIEV----AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-------- 1070
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
W+DWG +P+IE MDG+ R T++ I WP GL +D R+Y+AD+KL I
Sbjct: 1071 ---WSDWGNHPKIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIR 1127
Query: 397 YDGT 400
+GT
Sbjct: 1128 LNGT 1131
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 95 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 144
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 145 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 202
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 203 ---------ALVVDVQNGYLYWTDWGDHSL 223
>gi|14018364|emb|CAC38356.1| ApoE receptor-2 [Mus musculus]
Length = 870
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 153/299 (51%), Gaps = 46/299 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV+ KVCD + DC + +DE C L EC H G CS+ C +G CTCP G L
Sbjct: 217 ECVDGGKVCDDQRDCRDWSDEPQKVCGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL 276
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ P CSQ+C N KG + C C+ GY ++ CKA+ + LI +N
Sbjct: 277 -DQKTCGDIDECQDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAVAGKSPSLIFTN 335
Query: 123 RHSILVADLEEKG--------KDHRAQDIVVS---------------------------- 146
RH + DL ++ K+ A D+ V+
Sbjct: 336 RHEVRRIDLVKRDYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAHMDKASIPDEQ 395
Query: 147 ------GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
L EGLA DW+ HIYW DS I V +G R L +++PR + +D
Sbjct: 396 VVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATTDGRRRCTLFSRELSEPRAIAVD 455
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG +IE+ G++G++R ++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 456 PLRG--FMYWSDWGFQAKIEKAGLNGADRQPLVSDNIEWPNGITLDLLSQRLYWVDSKL 512
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 115/465 (24%), Positives = 189/465 (40%), Gaps = 110/465 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT---CPPGEIL 61
CV K C+ + DCP+G+DE GC L +TC P C C G +
Sbjct: 177 CVLAIKRCNQERDCPDGSDEA-GC----------LQESTCE-GPRRFQCKSGECVDGGKV 224
Query: 62 SNDSVTCQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110
+D C+D +NEC G CS +CT+ K + C+C G+ L D TC
Sbjct: 225 CDDQRDCRDWSDEPQKVCGLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGD 283
Query: 111 INH----SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
I+ A I N + + D + V G + I + +
Sbjct: 284 IDECQDPDACSQICVNYKGYFKCECHPGYE----MDTLTKNCKAVAGKSPSLIFTNRH-- 337
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226
+ RI++ + + I + K+ + LD T ++W D +I MD
Sbjct: 338 --EVRRIDLVKRDYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAHMDK 388
Query: 227 SN----RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
++ + +I +++ P GL +D + + +
Sbjct: 389 ASIPDEQVVLIDEQLHSPEGLAVDW------------------------------VHKHI 418
Query: 283 YWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFW 340
YW D G I A DG L S +L E A+A+D G +Y W
Sbjct: 419 YWTDSGNK----TISVATTDGRRRCTLFSRELSEPRAIAVDPLRGFMY-----------W 463
Query: 341 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
+DWG +IE+ G++G++R ++S I WPNG+TLD+ ++R+Y+ DSKL + +++G
Sbjct: 464 SDWGFQAKIEKAGLNGADRQPLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFNGG 523
Query: 401 GRQQVILIDLMVEFTNDLMGDN-GVPALAL-----DLENGMLYYS 439
R+ +I F+ D + GV + DLEN ++ +
Sbjct: 524 NRKMLI-------FSTDFLSHPFGVAVFEVQVFWTDLENEAIFSA 561
>gi|315468531|ref|NP_001186820.1| low-density lipoprotein receptor-related protein 8 precursor [Sus
scrofa]
gi|315139193|gb|ADT80789.1| low density lipoprotein receptor-related protein 8 [Sus scrofa]
Length = 957
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 156/307 (50%), Gaps = 51/307 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K CD + DCP+ +DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 305 CVPAGKRCDQQQDCPDRSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGYRLL 363
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG + C C GY ++ CKA+ + L+ +N
Sbjct: 364 -DQKTCGDIDECEDPDACSQICVNYKGYFKCECYPGYEMDALTRNCKAVVGRSPSLVFTN 422
Query: 123 RHSILVADLEEKG--------KDHRAQDIVVS---------------------------- 146
RH + DL ++ K+ A D+ V+
Sbjct: 423 RHEVRRIDLVKRDYSRVIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASYPAEQ 482
Query: 147 ------GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
L EGLA DW+ HIYW DS I V +G R L ++++PR + +D
Sbjct: 483 EVLIDEQLHSPEGLAVDWVHRHIYWTDSGSKTISVATVDGRRRRTLFSRDLSEPRAIAVD 542
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK-- 258
P G +++W+DWG +IE+ G++G++R T+++ I WPNG+TLD+ +R+Y+ DSK
Sbjct: 543 PLRG--FMYWSDWGYQAKIEKSGLNGADRQTLVADSIEWPNGITLDLLNQRLYWVDSKLH 600
Query: 259 -LDFIDC 264
L IDC
Sbjct: 601 QLSSIDC 607
>gi|321461614|gb|EFX72644.1| hypothetical protein DAPPUDRAFT_308138 [Daphnia pulex]
Length = 1788
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 114/335 (34%), Positives = 163/335 (48%), Gaps = 57/335 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C+ +++ CDG DC + ADEG C+ C N CH TP G +C+CP G L
Sbjct: 140 KCMPISRACDGYADCDDRADEGGQCNSTSNCSNSTRCPNECHKTPRGPICSCPSGYQL-- 197
Query: 64 DSVTCQDMNECEQ-PGYCSQMCTNTKGSYICSCNEGYVL-EYDNHTCKAINHSAAFLIIS 121
+ TC D++EC P CSQ C N +G + CSC+ GY + D +C A LI +
Sbjct: 198 NGTTCVDIDECSMDPPMCSQKCANNQGGFECSCSSGYTVGTRDKRSCIANGPEPMLLITT 257
Query: 122 NR----------------------HSILVADLE-------EKGKDHRA-----------Q 141
+R H + AD E EK KD Q
Sbjct: 258 DRDIRYISLPSKEYGLVQSGISQAHGV-AADYEDGFVYWNEKSKDKAGIYKSMLDGSAFQ 316
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V G+++VE LA DW+G HIY+ DS + VCD + T ++ + +PR + + P
Sbjct: 317 YVVSVGVEMVEDLAIDWVGRHIYFADSGRKHVVVCDFHATICSIVISGQLEKPRAVAVYP 376
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G LFW+DWG +P I GMDGS R+ +I+ I WPNGL +D +R+Y+ D+KL+
Sbjct: 377 EEG--LLFWSDWGSSPHIGSAGMDGSQRTNVITKDIIWPNGLVVDETIQRIYWGDAKLNR 434
Query: 262 I--------DCKSLEIKTNVNYST-IFR-KLYWID 286
I D K L +K Y+ IF ++W D
Sbjct: 435 IESSKIDGSDRKILPVKVTHPYALDIFENNIFWCD 469
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 129/313 (41%), Gaps = 62/313 (19%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
++ CV + VCDGK DC +G DEG GC A+ G C C P P+ C C PG
Sbjct: 1196 LSGECVQASSVCDGKFDCFDGTDEGSGC--AKSCQNNGQCPQICVPGPMEPTCLCEPGYE 1253
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
+ C D++EC CSQ C NTKG Y CSC GY LE D TCKA + ++
Sbjct: 1254 SLINGKQCVDVDECTFENKCSQFCNNTKGGYRCSCAPGYSLEPDQITCKAASGRPMLIVA 1313
Query: 121 SNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG 180
+N H ++ + D + +V + ++G+AY +YW+ + V N
Sbjct: 1314 TNHHVEILLN-----SDIASSRFLVQSVPAIKGIAYHDKMSTLYWITTE----GVSRSNS 1364
Query: 181 TNRIVLAKDNITQPRGMMLDPSPGTRW--------------------------------- 207
+ ++ K N P G+ LD + G +
Sbjct: 1365 GGQSLIYKINDLIPSGLALDKATGNIYYCALKNASRTGQDQSVIRVIAKSLEAEVNIITT 1424
Query: 208 ---------------LFWTDWGE--NPRIERIGMDGSNRSTIIST-KIYWPNGLTLDIAT 249
LFW++ + RI R MDG + + S KI +P +T+D
Sbjct: 1425 QSIITDIALDSQKGILFWSEHTKPYTGRIVRATMDGRSTMWLYSIDKIMYPTAITVDSIK 1484
Query: 250 RRVYFADSKLDFI 262
R+Y+ D L I
Sbjct: 1485 SRIYWTDITLQSI 1497
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 138/335 (41%), Gaps = 60/335 (17%)
Query: 80 CSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
CS +C + T Y CSC G L D TC++I+ + ++I+ I + GKD
Sbjct: 520 CSHLCLLSPTVQGYKCSCPVGMTLNKDGRTCESISAHESSIVIATFSDIYRLTHHQIGKD 579
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+ + +D + LAY+ +G I + D + R T R + +N+ G
Sbjct: 580 SILR-LPTRNVDNIGALAYNPLGHSIVYSD-MIQRTIYSMHLDTYRQTVLFENVDMVEG- 636
Query: 198 MLDPSPGTRWLFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
LD P T ++WT+ + + DG +++ +Y P G+T+ + R++ +
Sbjct: 637 -LDVDPFTENIYWTEVTRGTVVVGQKNHDGVYERLVLARDLYSPQGITIGSQSGRMFIVE 695
Query: 257 SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE 316
++ + I +MDG+N LV Q+Y
Sbjct: 696 GRISHV---------------------------------ISVWHMDGTNRQELV--QVYG 720
Query: 317 AL-ALDLENGMLYYS-TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
+ A+ + LY+S +L+ T IERI ++G NR TI+ + + P +
Sbjct: 721 TVSAMAYDGKHLYFSDSLRGT-------------IERIEVNGENR-TILRSHLGTP--VA 764
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
+D ++ V++ I + N T + +ID
Sbjct: 765 MDASSDSVFWLTQSSTRISWLNKQETKTMRGFVID 799
>gi|392340666|ref|XP_001066578.3| PREDICTED: low-density lipoprotein receptor-related protein 8
[Rattus norvegicus]
Length = 1007
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 154/298 (51%), Gaps = 46/298 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CV+ KVCD + DC + +DE C L EC H G CS+ C +G CTCP G L
Sbjct: 347 CVDGGKVCDDQRDCRDWSDEPQKVCGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL- 405
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D TC D++EC+ P CSQ+C N KG + C C+ GY ++ CKA+ + LI +NR
Sbjct: 406 DQKTCGDIDECQDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAVAGRSPSLIFTNR 465
Query: 124 HSILVADLEEKG--------KDHRAQDIVV------------------------------ 145
H + DL ++ K+ A D+ V
Sbjct: 466 HEVRRIDLVKRDYSRLIPMLKNVVALDVEVDTNRIYWCDLSYRKIYSAHMDKASIPDEQV 525
Query: 146 ----SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
L EGLA DW+ HIYW DS + V +G R L ++++PR + +DP
Sbjct: 526 VLIGEQLHSPEGLAVDWVHKHIYWTDSGNKTVSVATTDGRRRCTLFNRDLSEPRAIAVDP 585
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++W+DWG +IE+ G++G++R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 586 LRG--FMYWSDWGFQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 641
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 175/427 (40%), Gaps = 97/427 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT---CPPGEIL 61
C+ K C+ + DC +G+DE GC L +TC P C C G +
Sbjct: 306 CILAIKRCNQERDCLDGSDEA-GC----------LQESTCE-GPRRFQCKSGECVDGGKV 353
Query: 62 SNDSVTCQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110
+D C+D +NEC G CS +CT+ K + C+C G+ L D TC
Sbjct: 354 CDDQRDCRDWSDEPQKVCGLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGD 412
Query: 111 INH----SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
I+ A I N + + D + V G + I + +
Sbjct: 413 IDECQDPDACSQICVNYKGYFKCECHPGYE----MDTLTKNCKAVAGRSPSLIFTNRH-- 466
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226
+ RI++ + + I + K+ + LD T ++W D +I MD
Sbjct: 467 --EVRRIDLVKRDYSRLIPMLKNVVA------LDVEVDTNRIYWCDLSYR-KIYSAHMDK 517
Query: 227 SN----RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
++ + +I +++ P GL +D + + +
Sbjct: 518 ASIPDEQVVLIGEQLHSPEGLAVDW------------------------------VHKHI 547
Query: 283 YWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFW 340
YW D G V + A DG L + L E A+A+D G +Y W
Sbjct: 548 YWTDSGNKTVSV----ATTDGRRRCTLFNRDLSEPRAIAVDPLRGFMY-----------W 592
Query: 341 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
+DWG +IE+ G++G++R T++S I WPNG+TLD+ ++R+Y+ DSKL + +++G
Sbjct: 593 SDWGFQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFNGG 652
Query: 401 GRQQVIL 407
R+ +I
Sbjct: 653 NRKMLIF 659
>gi|291242827|ref|XP_002741307.1| PREDICTED: low density lipoprotein-related protein 1
(alpha-2-macroglobulin receptor)-like [Saccoglossus
kowalevskii]
Length = 1350
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 180/421 (42%), Gaps = 108/421 (25%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC--KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ ++CDG DC NG DE C+ EC H+ CS+ C+ +P G C CP G +L+
Sbjct: 519 CLEPHQLCDGIADCENGTDEA-YCEQNECDENHQSNDCSHICYNSPDGYRCGCPIGMVLT 577
Query: 63 NDSVTC--QDMNECEQPGYCSQMCTNTKGS---YICSCNEGYVLEYDNHTCKAINHSAAF 117
D+ C D + C G CSQ+C TKG+ Y C C +GY LE DN +C++ + +
Sbjct: 578 EDNKNCMFSDEDFCSMKGRCSQICVKTKGNRGPYYCDCYQGYQLEPDNWSCRSTDPGVPY 637
Query: 118 LIISNRHSILVADLEEKGKDHRA------------------------------------- 140
LI SNR+ + D+ + +
Sbjct: 638 LIFSNRYELRFLDIRHTSGSYSSLITNLRNSIALDAHYAKRLVFWTDVVDDKIYRGMITP 697
Query: 141 ----------QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
+ +V +GL EGLA DWI +IYW++S L++IEV NGT R L N
Sbjct: 698 DEDNAGLINVEPVVETGLATTEGLAVDWIADNIYWVESNLDQIEVARINGTMRTTLIAGN 757
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY---WPNGLTLD 246
+ PR + LDP G LFWTDW PRIER M G NR +++ WPNGLT+D
Sbjct: 758 MESPRAIALDPRDGL--LFWTDWDSGQPRIERASMAGENRIIVMNVTDLQGGWPNGLTID 815
Query: 247 IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
RR+ WID N I + DGS+
Sbjct: 816 FLERRII------------------------------WIDARSN----SIHSSFYDGSDV 841
Query: 307 SILVSGQ--LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
++ G L A+ L G ++FWTDW N ++ G N + + +
Sbjct: 842 HTILKGHEHLSHPFAVSLFEG-----------FVFWTDWKSNIVVKANKWTGGNVTVVHN 890
Query: 365 T 365
T
Sbjct: 891 T 891
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/316 (33%), Positives = 152/316 (48%), Gaps = 57/316 (18%)
Query: 3 DRCVNLTKVCDGKTDCP-NGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
+RC+ +T++CD CP +G+DEG C G C C PLG +C C G
Sbjct: 123 ERCILVTQLCDNIVQCPQDGSDEGAHCRDENVCANAG-CEKHCRIGPLGPVCFCDNGYKA 181
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
D +C D+NEC E G C QMC N G+Y CSC GY L C + L+I
Sbjct: 182 GPDGKSCVDVNECVEIVGVCEQMCINNIGNYECSCAPGYQLV--GQDCDIVVEEEPKLVI 239
Query: 121 SNRHSILVADLEEKGKD-----------------HRAQDI-------------------- 143
+N SI + L G D H Q +
Sbjct: 240 AN--SINIMTLLLNGTDFISDYVPSRQALALDFHHNQQKVCWVHHDLGTGASKLKSVNGA 297
Query: 144 -----------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
+ LD VE LA DWI +IY++D NRI +C N T I + ++
Sbjct: 298 TMDPATVEDIPIFFHLDNVEQLAIDWITDNIYFVDDVANRIFLCKPNTTMCITILDVDLV 357
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
PRG+ LDP+ G LF+TDWG +P++ R+ MDG+ + +++TK+ +P+G+TLD ++V
Sbjct: 358 NPRGIALDPADGL--LFYTDWGSHPKVVRMNMDGTGVTALVTTKVVFPHGVTLDYDQKKV 415
Query: 253 YFADSKLDFIDCKSLE 268
Y+ D+ LD+I+C + E
Sbjct: 416 YWVDAYLDYIECMTYE 431
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 5/116 (4%)
Query: 144 VVSGLDLVEGLAYDWIGGHIYW--LDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+VSG+ GLA DWI +IYW D+ I V + T R + ++ P + ++P
Sbjct: 1023 IVSGVSNPHGLAIDWISRNIYWTSYDNSKKAINVAKLDKTYRNSIVTGDLDHPSAIAVNP 1082
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
G +FW + GE+P+IE MDG+NR II + P GL +D+ ++Y+ D+
Sbjct: 1083 REGK--IFWINNGESPKIEAANMDGTNRVAIIE-GLQKPGGLAIDLNLNKLYYTDA 1135
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 28/175 (16%)
Query: 246 DIATRRVYFADSKLD-----FIDCKSLE-IKTNVNYST------IFRKLYWIDEGGNGVP 293
D +R+Y+ D KL+ FI+ +E I + V+ I R +YW +
Sbjct: 994 DAREKRIYWTDVKLNAIKRVFINGTGIESIVSGVSNPHGLAIDWISRNIYWTSYDNSKKA 1053
Query: 294 LKIGKANMDGSNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
+ + K +D + + +V+G L A+A++ G + FW + GE+P+IE
Sbjct: 1054 INVAK--LDKTYRNSIVTGDLDHPSAIAVNPREGKI-----------FWINNGESPKIEA 1100
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
MDG+NR II + P GL +D+ ++Y+ D+ I +++G Q +
Sbjct: 1101 ANMDGTNRVAIIE-GLQKPGGLAIDLNLNKLYYTDAGDQSIHASDFNGENAQIIF 1154
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 7/132 (5%)
Query: 71 MNEC-EQPGYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILV 128
+N C + G C Q+C T S +C C G+ ++ C+ I A+FL+ S I
Sbjct: 1219 VNACYDNNGDCQQLCLPTSASERVCKCTAGFTIDDGETICRGI---ASFLLYSMDTGIYG 1275
Query: 129 ADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK 188
L+ D ++GL L + +D +IYW D+ N I + T + L
Sbjct: 1276 ISLDLV--DTVDVLTPITGLTLAVAVDFDAAKDYIYWTDTMKNTIHRIKRDMTQKEDLLT 1333
Query: 189 DNITQPRGMMLD 200
+ + + G+ +D
Sbjct: 1334 NALGRVEGIAVD 1345
>gi|301627452|ref|XP_002942891.1| PREDICTED: low-density lipoprotein receptor 1-like [Xenopus
(Silurana) tropicalis]
Length = 894
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 155/304 (50%), Gaps = 47/304 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + KVC+ K DC + +DE C EC G C++ C+ +G C C G L
Sbjct: 288 ECITMDKVCNKKRDCRDWSDEPIKECGENECMRNNGGCAHICNDLKIGYECLCNEGYRLV 347
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D+NECE P CSQ+C N G Y C C EGY ++ +CK+I + A+L +N
Sbjct: 348 -DKKRCEDINECENPNTCSQICINLDGGYKCECREGYQMDPVTASCKSIG-TVAYLFFTN 405
Query: 123 RH------------------------------------------SILVADLEEKGKDHRA 140
RH I A +++
Sbjct: 406 RHEVRKMTLDRSEYTSFIPRLKNVVALDMEIASNKIYWSDLTQRKIYSASMDKADNTSHH 465
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ ++ S + +G+A DWI G+IYW DS+ + I V + G+ R L D++ +PR +++D
Sbjct: 466 ETVISSQIQAPDGIAVDWIHGNIYWTDSKFSTISVANTEGSKRKTLFSDDLAKPRDIVVD 525
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
PS G +++WTDWG +IE+ G++G +R +++ I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 526 PSQG--FMYWTDWGLPAKIEKGGLNGVDRYPLVTENIEWPNGITLDLTNQRLYWVDSKLH 583
Query: 261 FIDC 264
+ C
Sbjct: 584 SLSC 587
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 26/152 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
++ K +D S + + +L +ALD+E + ++W+D + +I M
Sbjct: 408 EVRKMTLDRSEYTSFIP-RLKNVVALDMEIA---------SNKIYWSDLTQR-KIYSASM 456
Query: 355 DG----SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
D S+ T+IS++I P+G+ +D +Y+ DSK I N +G+ R+ +
Sbjct: 457 DKADNTSHHETVISSQIQAPDGIAVDWIHGNIYWTDSKFSTISVANTEGSKRKTL----- 511
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
F++DL + +D G +Y++ G
Sbjct: 512 ---FSDDLAKPRDI---VVDPSQGFMYWTDWG 537
>gi|194895161|ref|XP_001978195.1| GG17831 [Drosophila erecta]
gi|190649844|gb|EDV47122.1| GG17831 [Drosophila erecta]
Length = 1978
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 153/312 (49%), Gaps = 61/312 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADE------GPGCDLAECKHKFGLCSNTCHPTPLG-ALCTCPP 57
C+ L++VCDG +DC +G+DE PGCD C + + CH P G A C CP
Sbjct: 282 CLTLSEVCDGHSDCSDGSDETELCHSKPGCDGKNC-----VLGSKCHMMPTGGAECICPR 336
Query: 58 GEILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA- 115
G L+ C+D++EC EQ CSQ C NT G Y C C+ GY+ + DN TC+A+ H +
Sbjct: 337 GFRLAKFEDKCEDIDECKEQDDLCSQGCENTSGGYRCVCDAGYLPDKDNRTCRAVVHGSI 396
Query: 116 ---AFLIISNRHSILVADLEE--------------------------------------- 133
L+ + + +I+ L E
Sbjct: 397 EQQPLLLYTTQMTIMGMHLHEDNVRNHVYQVAGNLSKVIGVAYDGSHIYWTNIQNEAESI 456
Query: 134 ---KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
G A+ ++ SGLD E LA DW+ +IY+ D+ + I VC +G N VL +
Sbjct: 457 VKANGDGSHAEILLTSGLDAPEDLAVDWLTQNIYFSDNIMRHIAVCSNDGLNCAVLVTQD 516
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ QPR + + P G +FWTDWGE P I R MDGS I+S I WPNG+ LD+ +
Sbjct: 517 VHQPRSLAVWPQKG--LMFWTDWGEKPMIGRASMDGSRSRPIVSDNIEWPNGIALDMHQQ 574
Query: 251 RVYFADSKLDFI 262
R+Y+ D+KL +
Sbjct: 575 RIYWVDAKLGSV 586
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 134/313 (42%), Gaps = 53/313 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFG--LCSNTCHPTPLGALCTCPPGEILS 62
CV+L++VC+ DC NG DEGP C A C+ G +C + C TP GA+C+C G L
Sbjct: 1353 CVDLSRVCNSFPDCTNGHDEGPKCATA-CRSASGRQVCQHKCRATPAGAVCSCFDGYRLD 1411
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS- 121
D +C D++EC++ C+Q+C NT G + C C+ ++L D +CK++ A L S
Sbjct: 1412 ADQKSCLDIDECQEQQPCAQLCENTLGGFQCQCHADFMLRQDRVSCKSLQSGATLLFSSF 1471
Query: 122 ---------------------NRHSILVADLEEKGKDHRAQD--------------IVVS 146
+R + D+ + A+D +
Sbjct: 1472 NEVRNLSEQPVMLNVAWSANDSRITGFDVDMHRQMGYFSAEDEGIIYQIDLQTKMIVRAL 1531
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPG 204
GL L+ DW+ G++Y L S I+ C G RIV ++ P+ + + G
Sbjct: 1532 GLPTPTKLSVDWVTGNVYVL-SGAQEIQACSFEGRMCGRIV----HVKSPKHVKHLAADG 1586
Query: 205 TRWLFW------TDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+ +G+ + I +DGS R ++ + LT D + +YF D
Sbjct: 1587 YHGRIFYIVIRTEGYGQTSSEIHMARLDGSRRDMLLQRSESFMTALTTDPHQQLLYFVDQ 1646
Query: 258 KLDFIDCKSLEIK 270
++ S +K
Sbjct: 1647 HARTLERISYRLK 1659
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 175/447 (39%), Gaps = 89/447 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAE--CKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + +CDG+ DC + +DE GC AE C + LC N G L
Sbjct: 198 CIPIDFMCDGRADCADKSDEVAGCKQAEATCSAEGHLCDN---------------GRCLR 242
Query: 63 NDSVTCQDMNEC----EQPGYCSQMCTNTKGSYICS-----------------CNEGYVL 101
C +++C ++ G C +C KG ++C C++G
Sbjct: 243 RKHWVCDGVDDCGDGSDERG-CQNLCKPEKGKFLCRNQETCLTLSEVCDGHSDCSDGSDE 301
Query: 102 EYDNHT--------------CKAINHSAAFLIISNRHSILVADLEEKGKD----HRAQDI 143
H+ C + A I +A E+K +D D+
Sbjct: 302 TELCHSKPGCDGKNCVLGSKCHMMPTGGAECICPR--GFRLAKFEDKCEDIDECKEQDDL 359
Query: 144 VVSGLDLVEGLAYDWI--GGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
G + G Y + G++ D+R R V ++L +T GM L
Sbjct: 360 CSQGCENTSG-GYRCVCDAGYLPDKDNRTCRAVVHGSIEQQPLLLYTTQMT-IMGMHLHE 417
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
R + G ++ + DGS+ IYW N + + S +
Sbjct: 418 D-NVRNHVYQVAGNLSKVIGVAYDGSH--------IYWTNIQNEAESIVKANGDGSHAEI 468
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
+ L+ ++ + + +Y+ D + I + DG N ++LV+ +++ +L
Sbjct: 469 LLTSGLDAPEDLAVDWLTQNIYFSDN----IMRHIAVCSNDGLNCAVLVTQDVHQPRSLA 524
Query: 322 L--ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + G+ +FWTDWGE P I R MDGS I+S I WPNG+ LD+
Sbjct: 525 VWPQKGL-----------MFWTDWGEKPMIGRASMDGSRSRPIVSDNIEWPNGIALDMHQ 573
Query: 380 RRVYFADSKLDFIDFCNYDGTGRQQVI 406
+R+Y+ D+KL + DGTGR+ V+
Sbjct: 574 QRIYWVDAKLGSVQTVRPDGTGRRTVL 600
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 10/108 (9%)
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
R++ IV ++ G+A D IYW+D++L ++ +GT R + + P G+
Sbjct: 552 RSRPIVSDNIEWPNGIALDMHQQRIYWVDAKLGSVQTVRPDGTGRRTVLDGMLKHPYGLA 611
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNR------STIISTKIYWP 240
+ L+W+DW G + TI + IY P
Sbjct: 612 IFED----QLYWSDWATKSVHACHKFSGKDHRILAKDRTIYAVHIYHP 655
>gi|170074436|ref|XP_001870571.1| pro-epidermal growth factor [Culex quinquefasciatus]
gi|167871294|gb|EDS34677.1| pro-epidermal growth factor [Culex quinquefasciatus]
Length = 513
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 172/400 (43%), Gaps = 87/400 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV+L VCDGK DC + +DE C EC C C TP G++C C G +
Sbjct: 160 CVDLKMVCDGKDDCGDRSDETGLCTSRECDSM--RCPEGCKNTPHGSVCLCKAGFVFDRK 217
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S C+D+NECE+ G CSQ C NT GS+ C+C + L D TC+ + + A L+ + +
Sbjct: 218 SKQCEDVNECERYGLCSQGCENTPGSFRCTCASKFKLRKDGRTCEIADSTEALLLYTTQK 277
Query: 125 SILVADLEEKGKDHRAQD--------------------------------------IVVS 146
SI L K + + A++ ++ S
Sbjct: 278 SIGALYLTSKHQYYVAKNLSQVIGVSYDGSYVYWTDISFKTEAIERSLEDGSKRELLLTS 337
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTR 206
GL E LA DW+ G+IY+ DS I VC NG + L +D + +PRG+ L P GT
Sbjct: 338 GLASPEDLALDWLTGNIYFSDSGHMMIAVCSNNGQHCSSLIQDTLHKPRGIALLPQNGT- 396
Query: 207 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKS 266
+F++DWG+ I GMDG NR +I I+WPNGL+LD R+Y+ D+KL
Sbjct: 397 -MFYSDWGDKAMIGTAGMDGKNRRVLIDENIHWPNGLSLDWPNGRLYWVDAKLK------ 449
Query: 267 LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGM 326
KI +DG+ + ++ L A+ + N
Sbjct: 450 ----------------------------KIESVRLDGTQRTTVIGDVLKHPFAISVFNDR 481
Query: 327 LYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 366
+Y W+DW G R T++ +
Sbjct: 482 IY-----------WSDWDTKSIQSCDKFSGKQRKTVVHDR 510
>gi|351698597|gb|EHB01516.1| Low-density lipoprotein receptor-related protein 1B, partial
[Heterocephalus glaber]
Length = 4485
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 183/420 (43%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+GK DCP+G+DEG CD EC G CSN C P G +C+CP G L+
Sbjct: 1037 CLQPEKLCNGKRDCPDGSDEGDLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLNK 1094
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K CSC EG+ L+ D +C +++ AF+I S R
Sbjct: 1095 DNKTCEIVDYCSSHLKCSQVCEQHKHMVKCSCYEGWKLDPDGESCTSVDPFEAFIIFSIR 1154
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1155 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSENGGVSAIE 1214
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 1215 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGGMEHPRAIALDP 1274
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 1275 RFGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAR 1332
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG+N ++ G Y +
Sbjct: 1333 SDAI------------YSALY----------------------DGTNMIEIIRGHEYLSH 1358
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 1359 PFAVS---LYGSE------VYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYHPS 1409
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 143/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ ++CD K DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 2789 RCIPSGRLCDNKDDCGDGSDE-RNCHINECLSKKTSGCSQDCQDLPISYKCKCWPGFQLK 2847
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C +GY ++ DN + CK+++ FLI++
Sbjct: 2848 DDGKTCVDIDECSSGFPCSQQCINTYGTYKCLCTDGYKIQPDNPNGCKSLSDEEPFLILA 2907
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
+ H I L ++G D+R + I
Sbjct: 2908 DHHEIRKISTDGSNYTLLKQGLNNVIAIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDI 2967
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D IEV NG +L + PR + LDP
Sbjct: 2968 KVVHNTAVPNALAVDWIGKNLYWSDMEKRIIEVSKVNGLYPTILVSKRLKFPRDLSLDPR 3027
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +L+W D E P I R+GMDGSN+S +I T+I P LT+D R+Y+AD
Sbjct: 3028 AG--YLYWIDCCEYPHIGRVGMDGSNQSVVIETRISRPMALTIDYVNDRLYWAD 3079
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 130/286 (45%), Gaps = 58/286 (20%)
Query: 26 PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCT 85
P C C++K L N C C G + D +C+D +EC G CSQ C
Sbjct: 4 PNCQQLNCQYKCALIRNR-------TRCYCEDGFEVKEDGRSCKDQDECAVYGTCSQTCV 56
Query: 86 NTKGSYICSCNEGYVLEYDNHTCKAINH---SAAFLIISNRHSILVADL----------- 131
NT GSY C C EGY+++ +N +CKA N L+I+N +I + L
Sbjct: 57 NTHGSYACGCAEGYIMQPNNRSCKAKNEPTDKPPMLLIANSETIEIFHLNGSKTATLNPV 116
Query: 132 --------------------EEKGKDHRAQDI---------------VVSGLDLVEGLAY 156
E + ++ + + ++ VE +A
Sbjct: 117 NRNEIHTLDFIYEEEIICWVESRDTSNQLKCLQITKTGKLMDEWTINILQSFHNVEQMAI 176
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ ++Y++D +RI VC+ NG+ + L ++ P+ + +DP G LF+TD+G
Sbjct: 177 DWLTRNLYFVDHVSDRIFVCNFNGSVCVTLLDLDLHNPKAIAVDPIAGK--LFFTDYGNV 234
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
++ER MDG NR+ II +K P L LD+ + VY+ D LD+I
Sbjct: 235 AKVERCDMDGVNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYI 280
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 125/287 (43%), Gaps = 60/287 (20%)
Query: 69 QDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
Q N C G CSQ+C T + + C C GY L+ + +C+ I +FL+ S I
Sbjct: 1720 QGSNSCHLNNGGCSQLCLPTSENTRTCMCTVGYYLQKNRMSCQGIE---SFLMYSVHEGI 1776
Query: 127 LVADLEEKGK----------------DHRAQ-------------------------DIVV 145
LE K D A+ DI+
Sbjct: 1777 RGIPLEPSDKMDALMPISGTSFAVGIDFHAENDTIYWTDMGFNKISRAKRDQTWKEDIIT 1836
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL VEG+A DWI G++YW D N IEV NG+ R V+ + QPR + + P G
Sbjct: 1837 NGLGRVEGIAIDWIAGNMYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIAVHPEKG- 1895
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+LFWT+WG+ P I + +DGS + ++S I WPNG+++D ++Y+ D++ D I+
Sbjct: 1896 -FLFWTEWGQMPCIGKARLDGSEKLVLVSMGIVWPNGISIDYEENKLYWCDARTDKIERI 1954
Query: 266 SLEIKTN------------VNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
LE N + + +YW D ++ G N
Sbjct: 1955 DLETGGNREMVLSGSNVDMFSVAVFGAYVYWSDRAHANGSIRRGHKN 2001
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 132/328 (40%), Gaps = 74/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSNT--CHPTPLGALCTCPP 57
+C+ + CD DC +G+DE GC C+ C + C+ C C P
Sbjct: 3659 KCIPMDLQCDRLDDCGDGSDE-QGCRTTPTEYTCEDNVNPCGDDAYCNQIKTSVFCRCKP 3717
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G + + C+D+NEC G CSQ C N GSY C C++ + + N+TC A
Sbjct: 3718 GFQRNMKNRQCEDLNECLVFGTCSQQCINIHGSYKCVCDQNF--QAQNNTCIAKGSEDQV 3775
Query: 118 LIISNRHSIL--------------VADLEE------------------------------ 133
L I+N IL ++ +E
Sbjct: 3776 LYIANDTDILGFIYPFNYSGDHQQISHIEHNSRITGMDVYYQRDMIIWSTQFNPGGIFYK 3835
Query: 134 --KGKDHRAQD--IVVSGLDLVEGLAYDWIGGHIYWLD-SRLN--------------RIE 174
G++ R + ++ +A DW+ G+IYW D SR++ +
Sbjct: 3836 MIHGREKRQANSGLICPEFKRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSVN 3895
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V NG+N L + +P + + P G ++WT G++ IE MDG+ R ++
Sbjct: 3896 VGQLNGSNCTRLLTNMAGEPYAIAVHPKRGM--MYWTVIGDHSHIEEAAMDGTLRRILVQ 3953
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D T R+Y+AD +L I
Sbjct: 3954 KNLQRPTGLAVDHFTERIYWADFELSII 3981
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 105/241 (43%), Gaps = 57/241 (23%)
Query: 77 PGYCSQMCTNTKGSY---ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA-DLE 132
PG CS +C GSY C C G+ L D +CK + R I+ DL
Sbjct: 369 PGGCSHICL-LSGSYKTRTCRCRTGFNLGSDGRSCKRPKNELFLFYGKGRPGIVRGMDLN 427
Query: 133 EKGKDH-----------RAQD------------------------------IVVSGLDLV 151
K D RA D I+ LD V
Sbjct: 428 TKIADEYMIPIENLVNPRAVDFHAETNYIYFADTTSFLIGRQKIDGTERETILKDDLDNV 487
Query: 152 EGLAYDWIGGHIYWL-DSRLNRIEVC--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
EG+A DWIG ++YW D I V ++ +R L + ++ PRG+++DP G W+
Sbjct: 488 EGIAVDWIGDNLYWTNDGHRKTINVARLEKASQSRKTLLEGEMSHPRGIVVDPVNG--WM 545
Query: 209 FWTDWGENP------RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+WTDW E+ RIE+ MDG NR +++K+ WPNGLTLD +Y+ D+ D I
Sbjct: 546 YWTDWEEDEIDASVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFQASMLYWCDAYYDHI 605
Query: 263 D 263
+
Sbjct: 606 E 606
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 17/131 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCT 335
+ R LY++D V +I N +GS L+ L+ +A+A+D G L
Sbjct: 179 LTRNLYFVDH----VSDRIFVCNFNGSVCVTLLDLDLHNPKAIAVDPIAGKL-------- 226
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
F+TD+G ++ER MDG NR+ II +K P L LD+ + VY+ D LD+I
Sbjct: 227 ---FFTDYGNVAKVERCDMDGVNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYIGVV 283
Query: 396 NYDGTGRQQVI 406
+Y G R +I
Sbjct: 284 DYQGKSRHTII 294
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 96/224 (42%), Gaps = 33/224 (14%)
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++D L+WTD + I+R ++G+ T+IS I GL +D +R +Y+ S
Sbjct: 1497 VIDFDASEERLYWTDI-KTQTIKRAFINGTGLETVISRDIQSIRGLAVDWVSRNLYWISS 1555
Query: 258 KLDFIDCKSLEIKTNVNYSTIFR--------------KLYWIDEGGNGVPLKIGKANMDG 303
+ D + ++ S I KLYW D GN I ANMDG
Sbjct: 1556 EFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPIRGKLYWTD--GN----TINMANMDG 1609
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
SN+ IL Q E + L ++ Y+ K L+W G N I R +DG N I
Sbjct: 1610 SNSKILFQNQ-KEPVGLSID-----YAENK----LYWISSG-NGTINRCNLDGGNLEVIE 1658
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
S K L I +++++AD L + CN GR IL
Sbjct: 1659 SMKEELTKATALTIMDKKLWWADQNLAQLGTCN-KRDGRNPTIL 1701
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G N ++S+ I PNGLT+D ++YF+D L
Sbjct: 2214 ECQNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSSDILTPNGLTIDHRAEKLYFSDGSLGK 2273
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 2274 IERCEYDGSQRHVIV 2288
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 161/419 (38%), Gaps = 70/419 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGP-GCDLAE---CKHKFGLCSNT-CHPTPLGA--LCTCPP 57
C+ K C+G DC + +DE G D + CK CSN C P L L C
Sbjct: 3616 CLQSEKPCNGVDDCGDNSDEDHCGKDTYKAKPCKKDEFACSNKKCIPMDLQCDRLDDCGD 3675
Query: 58 GE-----ILSNDSVTCQD-MNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI 111
G + TC+D +N C YC+Q+ K S C C G+ N C+ +
Sbjct: 3676 GSDEQGCRTTPTEYTCEDNVNPCGDDAYCNQI----KTSVFCRCKPGFQRNMKNRQCEDL 3731
Query: 112 NHSAAFLIIS----NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDW-IGGHIYWL 166
N F S N H ++ + I D V +A D I G IY
Sbjct: 3732 NECLVFGTCSQQCINIHGSYKCVCDQNFQAQNNTCIAKGSEDQVLYIANDTDILGFIYPF 3791
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMML---DPSPGTRWLFWTDWGENPRIERIG 223
+ + ++ +RI ++ R M++ +PG + G R G
Sbjct: 3792 NYSGDHQQISHIEHNSRITGM--DVYYQRDMIIWSTQFNPGG-IFYKMIHGREKRQANSG 3848
Query: 224 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD-SKLDFIDCKSLEIKTNVNYSTIFRKL 282
+ I + P + +D +Y+ D S++ + Y+T + L
Sbjct: 3849 L--------ICPEFKRPRDIAVDWVAGNIYWTDHSRMHWFS----------YYTTHWTSL 3890
Query: 283 YWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFW 340
+ + ++GSN + L++ E A+A+ + GM+Y W
Sbjct: 3891 RY----------SVNVGQLNGSNCTRLLTNMAGEPYAIAVHPKRGMMY-----------W 3929
Query: 341 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
T G++ IE MDG+ R ++ + P GL +D T R+Y+AD +L I YDG
Sbjct: 3930 TVIGDHSHIEEAAMDGTLRRILVQKNLQRPTGLAVDHFTERIYWADFELSIIGSVLYDG 3988
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 94/242 (38%), Gaps = 58/242 (23%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-----NRIEVCDENGTNR---IVLAKDNIT 192
+ ++V + VEGLAY +YW S + ++ +R I +++D+
Sbjct: 2148 RQVIVENVGSVEGLAYHRAWDTLYWTSSTTSSITRHTVDQTRPGAFDREAVITMSEDD-- 2205
Query: 193 QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
P + LD +FWT+W E +P I R + G N ++S+ I PNGLT+D +
Sbjct: 2206 HPHVLALDEC--QNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSSDILTPNGLTIDHRAEK 2263
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+YF+D L KI + DGS ++V
Sbjct: 2264 LYFSDGSLG----------------------------------KIERCEYDGSQRHVIVK 2289
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
L+L + + ++FW+DWG + G + + S + P
Sbjct: 2290 SGPGTFLSLAVYDN-----------YIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPM 2338
Query: 372 GL 373
G+
Sbjct: 2339 GI 2340
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 27/185 (14%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN--RIEVCDENGTNRIVLAKDNITQPRGMM 198
+ ++ + + GLA DW+ ++YW+ S + +I V +G+ + + I +P+ +
Sbjct: 1528 ETVISRDIQSIRGLAVDWVSRNLYWISSEFDETQINVARLDGSLKTSIIH-GIDKPQCLA 1586
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS- 257
P G L+WTD I MDGSN S I+ P GL++D A ++Y+ S
Sbjct: 1587 AHPIRGK--LYWTDGNT---INMANMDGSN-SKILFQNQKEPVGLSIDYAENKLYWISSG 1640
Query: 258 ------------KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM-DGS 304
L+ I+ E+ + + +KL+W D+ ++G N DG
Sbjct: 1641 NGTINRCNLDGGNLEVIESMKEELTKATALTIMDKKLWWADQN----LAQLGTCNKRDGR 1696
Query: 305 NASIL 309
N +IL
Sbjct: 1697 NPTIL 1701
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ +V S + GL D +Y+ D L +IE C+ +G+ R V+ K G L
Sbjct: 2241 AQVVVSSDILTPNGLTIDHRAEKLYFSDGSLGKIERCEYDGSQRHVIVKSG----PGTFL 2296
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ ++FW+DWG + G + + S + P G+
Sbjct: 2297 SLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGI 2340
>gi|402588758|gb|EJW82691.1| hypothetical protein WUBG_06399 [Wuchereria bancrofti]
Length = 1072
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/236 (41%), Positives = 130/236 (55%), Gaps = 42/236 (17%)
Query: 68 CQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-ISNRHSI 126
C+ NEC CSQ CT+ K + CSC EGY L+ D TCK + I +SNR+ I
Sbjct: 18 CEPENECLDARSCSQNCTDEKHGFTCSCEEGYTLDADKRTCKVTDGVQDMRIYVSNRNRI 77
Query: 127 LVAD-----------------------LEEK--GKDHRAQDI-------------VVSGL 148
+D +E++ D R + I + GL
Sbjct: 78 YWSDRFLENWHTFEARVENAIALAWDSVEDRIYWSDIREKKIYSATRNGTNVTVFISEGL 137
Query: 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
D+ EG+A DWI ++YW+DS LN IEV E R VL +N+ QPRG+ +DP G
Sbjct: 138 DVTEGIALDWIARNLYWVDSSLNTIEVASLERSDARAVLIHENVDQPRGIAVDPRKG--L 195
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
LFWTDWG+NPRIER MDGS R ++++KIYWPN + LD+ T R+YFADSKLD+ID
Sbjct: 196 LFWTDWGQNPRIERANMDGSERRVLVNSKIYWPNTIALDLTTNRLYFADSKLDYID 251
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 140/335 (41%), Gaps = 75/335 (22%)
Query: 60 ILSND---SVTCQDMNECEQPGYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSA 115
+LSND S C+ N G C +C S + C C GYVLE H C+ + S
Sbjct: 592 LLSNDAEHSHPCRTNN-----GNCEHLCIPKAFSQHYCMCATGYVLESATH-CRLFDQS- 644
Query: 116 AFLIISNRHSILVADLEEKGKDHRAQDIV----VSGLDL--------------------- 150
FLI++ + + L+E+ K A + + ++ +D
Sbjct: 645 -FLIVATKTQVTGIPLKEEQKRSIAMEPIGGTSIAAVDFEFESKSLFVAETSGPNRGIYK 703
Query: 151 --------------------VEGLAYDWIGGHIYWL--DSRLNRIEVCDENGTNRIVLAK 188
V +A DWI ++Y++ DS IEVC +G +R +L
Sbjct: 704 VILGSGEVNNIVRDNFGSFTVRSIALDWINYNLYFINVDSDRTHIEVCQLDGKHRKILLS 763
Query: 189 DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248
P + +DP R+L+W D G+ P I+R +DGS+R I+ I P L +D
Sbjct: 764 TKTETPTSLAVDPI--GRYLYWADQGQKPSIQRAFLDGSHRQVIVHENIAEPTDLIIDSN 821
Query: 249 TRRVYFADSKLDFI-----DCKSLEI-----KTNVNYSTIFRKLYWIDEGGNGVPLKIGK 298
+ +Y+ D+KLD I D +E+ + + + +YW D K+
Sbjct: 822 SHMIYWTDAKLDGIYRVRADGGPVELVRSDIAAAAGIALLGQTMYWTDNRLE----KVFS 877
Query: 299 ANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
A+ + S+L+S A DL N +++ +++
Sbjct: 878 ASSSPNQTSLLLSPTTIAAGLTDLGNVVVFDESVQ 912
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
LY+I+ + +++ +DG + IL+S + +L ++ R+L+W
Sbjct: 736 LYFINVDSDRTHIEV--CQLDGKHRKILLSTKTETPTSLAVD---------PIGRYLYWA 784
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
D G+ P I+R +DGS+R I+ I P L +D + +Y+ D+KLD I DG
Sbjct: 785 DQGQKPSIQRAFLDGSHRQVIVHENIAEPTDLIIDSNSHMIYWTDAKLDGIYRVRADG 842
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 16/114 (14%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLF 339
L+W+D G + K+ +A++DG NA ++VS L E LALD N LY+S K
Sbjct: 490 LFWLDRGSGAISPKVARADLDGKNALVIVSNDLTELNHLALDTINQRLYFSESKAG---- 545
Query: 340 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
RI + DG +R I++ P G+ ++++ADS D I+
Sbjct: 546 --------RISYVTYDGQDRHYILNDVGKQPRGIAF--FNNQLFYADSAFDSIE 589
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 27/138 (19%)
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGL 373
ALA+D + G+L FW D G +P++ R +DG N I+S + N L
Sbjct: 480 ALAIDSDRGLL-----------FWLDRGSGAISPKVARADLDGKNALVIVSNDLTELNHL 528
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLEN 433
LD +R+YF++SK I + YDG R + + D G + N
Sbjct: 529 ALDTINQRLYFSESKAGRISYVTYDGQDRHYI-------------LNDVGKQPRGIAFFN 575
Query: 434 GMLYYSTEGAEFLKTPLF 451
L+Y+ + ++ L
Sbjct: 576 NQLFYADSAFDSIEVTLL 593
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Query: 137 DHRAQDIVVSGL-DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDN---- 190
D + +I+ S + D +A DWIG ++Y + IEV R + +N
Sbjct: 414 DPESAEIIASQIPDDPYAMAMDWIGQNMYVANKISQTIEVVRTKDMQYRATVLNNNLSPT 473
Query: 191 -ITQPRGMMLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLD 246
+ P + +D G LFW D G +P++ R +DG N I+S + N L LD
Sbjct: 474 AVANPVALAIDSDRG--LLFWLDRGSGAISPKVARADLDGKNALVIVSNDLTELNHLALD 531
Query: 247 IATRRVYFADSK 258
+R+YF++SK
Sbjct: 532 TINQRLYFSESK 543
>gi|74181737|dbj|BAE32580.1| unnamed protein product [Mus musculus]
Length = 1457
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 157/304 (51%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDGK DC +G+DEG CD +C G CS+ C P G +C+CP G L +
Sbjct: 291 CLPPDKLCDGKDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGS 348
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 349 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 408
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 409 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 468
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 469 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 528
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R TI + WPNGLT+D +R+ + D++
Sbjct: 529 RDGI--LFWTDWDASLPRIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDAR 586
Query: 259 LDFI 262
D I
Sbjct: 587 SDAI 590
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 169/431 (39%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 987 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1043
Query: 137 ----------------DHRAQ-------------------------DIVVSGLDLVEGLA 155
D A+ D+V +G+ VEG+A
Sbjct: 1044 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1103
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG
Sbjct: 1104 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGH 1161
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D+++D I+ LE N
Sbjct: 1162 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQGGKLYWCDARMDKIERIDLETGENREV 1221
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 1222 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGCKDNATDSVPLRTGIGVQLKDIKVFN 1281
Query: 298 KANMDGSNASILVSGQ-----LYEA---LALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G LY A +GML C + + + E +
Sbjct: 1282 RDRQKGTNVCAVANGGCQQLCLYRGGGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 1341
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 1342 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 1400
Query: 396 NYDGTGRQQVI 406
N DG+GR ++
Sbjct: 1401 NDDGSGRTTIV 1411
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 133/337 (39%), Gaps = 62/337 (18%)
Query: 72 NECEQ---PGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL 127
N CE G CS +C N + C+C L DN TC FL+ + + I
Sbjct: 670 NPCEANGGRGPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYEFK---KFLLYARQMEIR 726
Query: 128 VADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
DL+ ++ V +D V L YD +YW D R I+ NGT +
Sbjct: 727 GVDLDAPYYNYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVV 785
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLD 246
++ G+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 786 SADLPNAHGLAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV- 841
Query: 247 IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
+ KLYW D G N I ANMDGSN
Sbjct: 842 -----------------------------HPLRGKLYWTD-GDN-----ISMANMDGSNH 866
Query: 307 SILVSGQLYE-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
++L SGQ LA+D LY W G N I R +DGS I +
Sbjct: 867 TLLFSGQKGPVGLAIDFPESKLY-----------WISSG-NHTINRCNLDGSELEVIDTM 914
Query: 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCN-YDGTG 401
+ L I ++++AD + + CN DG+G
Sbjct: 915 RSQLGKATALAIMGDKLWWADQVSEKMGTCNKADGSG 951
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 21/176 (11%)
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
++YW + T A +R + + ++ + L + + R L+W N +
Sbjct: 760 RVYWSDVRTQ--AIKRAFINGTGVETVVSADLPNAHGLAVDWVSRNLFWTSYDTN--KKQ 815
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
I A +DGS + +V G L+ +G++ + L+WTD G+N I MD
Sbjct: 816 INVARLDGSFKNAVVQG-------LEQPHGLVVHPLRG---KLYWTD-GDN--ISMANMD 862
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
GSN + + S + P GL +D ++Y+ S I+ CN DG+ ++ +ID M
Sbjct: 863 GSNHTLLFSGQ-KGPVGLAIDFPESKLYWISSGNHTINRCNLDGS---ELEVIDTM 914
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 410 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 459
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 460 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 510
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 511 ---TTLLAGDIEHPRAIALDPRDGILFWT 536
>gi|195059155|ref|XP_001995574.1| GH17685 [Drosophila grimshawi]
gi|193896360|gb|EDV95226.1| GH17685 [Drosophila grimshawi]
Length = 1879
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 166/351 (47%), Gaps = 65/351 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-DLAECKHKFGLCSNTCHPTPL-GALCTCPPGEILS 62
C+ L +VCDG+ C +G+DE C +C K TCH P GA C CP G L
Sbjct: 204 CLPLAQVCDGQAHCSDGSDESEACKSKPDCGAKQCPPGATCHMMPTSGAECLCPEGFRLL 263
Query: 63 NDSVTCQDMNECEQ-PGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAIN-----HSA 115
C+D+NECE+ CSQ C NT G Y C+C+ GYVL+ +NHTC A N
Sbjct: 264 KFKEKCEDINECEERDDLCSQRCENTSGGYRCTCDAGYVLDTSNNHTCHATNSVSGERQQ 323
Query: 116 AFLIISNRHSILVADLEEKGKDHR------------------------------------ 139
A L+ + + +++ L+++ ++
Sbjct: 324 ALLLYTTQVAVMGMHLKQQPQERNHIFTVATNLTKVIGVAYDEEHIYWTNIQNEAESIVR 383
Query: 140 -------AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
A+ ++ SGLD E LA DW+ +IY+ D+ + I VC +G + +VL ++
Sbjct: 384 ARSDGSMAEILLTSGLDAPEDLAVDWLTHNIYFSDNIMRHIAVCSNDGMSCVVLVTHDVH 443
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPRG+ L P G +FWTDWG+ P I R MDGS ++S KI+WPNG+ LD+ R+
Sbjct: 444 QPRGLALWPQRGQ--MFWTDWGDKPMIARASMDGSRSRPLVSDKIHWPNGIALDMHEERI 501
Query: 253 YFADSKLDFIDCKSLE-----------IKTNVNYSTIFRKLYWIDEGGNGV 292
Y+ D+KL + + +K + +LYW D G V
Sbjct: 502 YWVDAKLGSVQSVRPDGSSRRTVLDGILKHPYGLAVFEDQLYWSDWGTKSV 552
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 130/301 (43%), Gaps = 54/301 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV++++VC+G TDC NG DEGP C A C+ + LC + C TP GA+CTC G L D
Sbjct: 1302 CVDMSRVCNGFTDCTNGNDEGPQCASA-CRKQ--LCQHNCQATPAGAVCTCNEGYRLDGD 1358
Query: 65 SVTCQDMNECEQPG----YCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
+C D++EC G C+Q+C N GSY C C+ ++L D +CK+I+ A L
Sbjct: 1359 HRSCVDIDECVASGGAAQPCAQLCENMPGSYQCQCHADFMLRQDRSSCKSIHGGATLLFS 1418
Query: 121 S--------------------NRHSILVADL-----------EEKGKDHR-----AQDIV 144
S N I D+ EE+ +R I
Sbjct: 1419 SYNQVRNLSEQPVMLSVAWSVNDSRITGFDVDMQRQLGYFSSEEQNAIYRRDMDDHSRIA 1478
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRL--NRIEVCD-ENGTNRIVLAKDNITQPRGMMLDP 201
L +A +W+ G++Y + +I VC E I+ + + +D
Sbjct: 1479 ALALRSPTKMAVEWMTGNVYVISGSAAPQQISVCSFEAKMCGIIFQMTPRFSLKALAVDA 1538
Query: 202 SPGTRWLFWT-----DWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G LF+ +G+ +I +DGS R ++ + + + D +++YF
Sbjct: 1539 HMGR--LFYAAIRTESFGQPTTQIHMGRLDGSRRELLLRKQRSYVTAIATDPHQQQLYFV 1596
Query: 256 D 256
D
Sbjct: 1597 D 1597
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 132/335 (39%), Gaps = 57/335 (17%)
Query: 28 CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCS------ 81
CD A C H L P G C CP G LS D C+ E +Q Y
Sbjct: 590 CDSAHCSHLCLLAE----PESGGHTCACPDGMQLSPDGRRCR-QTEKKQRLYIGLRQVLL 644
Query: 82 QMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQ 141
++ + G ++ S + ++N L I++ + + + + R
Sbjct: 645 EIEHTSFGRHVVSATHHLHCHISDLVYNSVN---GTLFIADNLQRALFEYTPQESEPRLT 701
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL---AKDNITQPRGMM 198
++ L V GLA+D + ++YW D + IE+ +R ++ A D I P G+
Sbjct: 702 ALIYRNLGNVSGLAFDHLAHNLYWADMERSVIELLSLRTGHRALVHFFAGDEI--PIGLS 759
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
+ P+ G ++ + I+R+ + G+ T + F D
Sbjct: 760 VMPADGFMFVALKAR-RHTHIDRLALSGAGSQTHV--------------------FED-- 796
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D +I+ V++ T + LYW D N +I +N ++A L G+
Sbjct: 797 ----DLGDDDIRFVVDHET--QTLYWSDSDTN----RISFSNYRQTHAQ-LFRGKFRRPY 845
Query: 319 ALDLENGMLYYSTLKCTRWLFWT---DWGENPRIE 350
AL L N +++S L + ++WT + G N RIE
Sbjct: 846 ALALVNQDVFWSELG-SAAIYWTHKSNMGANKRIE 879
>gi|195352538|ref|XP_002042769.1| GM17661 [Drosophila sechellia]
gi|194126800|gb|EDW48843.1| GM17661 [Drosophila sechellia]
Length = 1977
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 151/312 (48%), Gaps = 61/312 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADE------GPGCDLAECKHKFGLCSNTCHPTPLG-ALCTCPP 57
C+ L++VCDG +DC +G+DE P CD +C CH P G A C CP
Sbjct: 281 CLTLSEVCDGHSDCSDGSDETDLCHSKPDCDAKKCA-----LGAKCHMMPAGGAECFCPK 335
Query: 58 GEILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAA 116
G L+ C+D++EC EQ CSQ C NT G Y C C+ GY+L+ DN TC+A+ H +
Sbjct: 336 GFRLAKFEDKCEDIDECKEQDDLCSQGCENTSGGYRCVCDAGYLLDKDNRTCRAVVHGSK 395
Query: 117 ----FLIISNRHSILVADLEE--------------------------------------- 133
L+ + + +I+ L E
Sbjct: 396 EQQPLLLYTTQMTIMGMHLREDNVRNHVYQVAGNLSKVIGVAYDGSHIYWTNIQNEAESI 455
Query: 134 ---KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
G A+ ++ SGLD E LA DW+ +IY+ D+ + I VC +G N VL +
Sbjct: 456 VKANGDGSHAEILLTSGLDAPEDLAVDWLTQNIYFSDNIMRHIAVCSNDGLNCAVLVTQD 515
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ QPR + + P G +FWTDWGE P I R MDGS I+S I WPNG+ LD+
Sbjct: 516 VHQPRSLAVWPQKG--LMFWTDWGEKPMIGRASMDGSRSRPIVSDNIEWPNGIALDMHQE 573
Query: 251 RVYFADSKLDFI 262
R+Y+ D+KL +
Sbjct: 574 RIYWVDAKLGSV 585
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 135/312 (43%), Gaps = 49/312 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFG--LCSNTCHPTPLGALCTCPPGEILS 62
CV+L++VC+ DC NG DEGP C A C+ G +C + C TP GA+C+C G L
Sbjct: 1352 CVDLSRVCNNFPDCTNGHDEGPKCATA-CRSASGRQVCQHKCRATPSGAVCSCFDGYRLD 1410
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS- 121
D +C D++EC++ C+Q+C NT G Y C C+ ++L D +CK++ A L S
Sbjct: 1411 ADQKSCLDIDECQEQQPCAQLCENTLGGYQCQCHADFMLRQDRVSCKSLQSGATLLFSSF 1470
Query: 122 -------------------NRHSILVADL-----------EEKG----KDHRAQDIVVS- 146
N I DL E++G D + + IV +
Sbjct: 1471 NEVRNLSEQPVMLNVAWSANDSRITGFDLDMHRQMGYFSVEDEGIVYQIDLQTKVIVRAL 1530
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTR 206
GL L+ DW G++Y L S I C G R+ ++ PR + G
Sbjct: 1531 GLPAPTKLSVDWATGNVYVL-SGAQDIHACSFVG--RMCGRIAHVKSPRHVKHLAVDGYH 1587
Query: 207 WLFW------TDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
+ +G+ + I +DGS R ++ + LT D + +YF D
Sbjct: 1588 ARIFYIVIRTEGYGQTSSEIHMARLDGSRRDMLVQRSESFMTALTTDPHQQLLYFVDQHT 1647
Query: 260 DFIDCKSLEIKT 271
++ S +KT
Sbjct: 1648 RTLERISYRLKT 1659
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 177/453 (39%), Gaps = 101/453 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAE--CKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + +CDG+ DC + +DE GC AE C + LC+N G L
Sbjct: 197 CIPIDFMCDGRPDCTDKSDEVAGCKQAEVTCPGEGHLCAN---------------GRCLR 241
Query: 63 NDSVTCQDMNEC----EQPGYCSQMCTNTKGSYICSCNE----------GYVLEYDNHTC 108
C +++C ++ G CS +C KG ++C E G+ D
Sbjct: 242 RKQWVCDGVDDCGDGSDERG-CSNLCEPQKGKFLCRNRETCLTLSEVCDGHSDCSDGSDE 300
Query: 109 KAINHS-----AAFLIISNRHSIL--------------VADLEEKGKD----HRAQDIVV 145
+ HS A + + ++ +A E+K +D D+
Sbjct: 301 TDLCHSKPDCDAKKCALGAKCHMMPAGGAECFCPKGFRLAKFEDKCEDIDECKEQDDLCS 360
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP----------R 195
G + G Y + Y LD +N T R V+ QP
Sbjct: 361 QGCENTSG-GYRCVCDAGYLLDK---------DNRTCRAVVHGSKEQQPLLLYTTQMTIM 410
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
GM L R + G ++ + DGS+ IYW N + +
Sbjct: 411 GMHLRED-NVRNHVYQVAGNLSKVIGVAYDGSH--------IYWTNIQNEAESIVKANGD 461
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
S + + L+ ++ + + +Y+ D + I + DG N ++LV+ ++
Sbjct: 462 GSHAEILLTSGLDAPEDLAVDWLTQNIYFSDN----IMRHIAVCSNDGLNCAVLVTQDVH 517
Query: 316 E--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
+ +LA+ + G+ +FWTDWGE P I R MDGS I+S I WPNG+
Sbjct: 518 QPRSLAVWPQKGL-----------MFWTDWGEKPMIGRASMDGSRSRPIVSDNIEWPNGI 566
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
LD+ R+Y+ D+KL + DGTGR+ V+
Sbjct: 567 ALDMHQERIYWVDAKLGSVQTVRPDGTGRRTVL 599
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 10/108 (9%)
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
R++ IV ++ G+A D IYW+D++L ++ +GT R + + P G+
Sbjct: 551 RSRPIVSDNIEWPNGIALDMHQERIYWVDAKLGSVQTVRPDGTGRRTVLDGMLKHPYGLA 610
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNR------STIISTKIYWP 240
+ L+W+DW G + TI + IY P
Sbjct: 611 IFED----QLYWSDWATKSVHACHKFSGKDHRILAKDRTIYAVHIYHP 654
>gi|270010181|gb|EFA06629.1| hypothetical protein TcasGA2_TC009548 [Tribolium castaneum]
Length = 4576
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 151/307 (49%), Gaps = 51/307 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C+ + +CD DC +G+DEG C C + CS+ CH P G +C+CPP L
Sbjct: 1143 KCITVDHLCDNIADCSDGSDEGGRCSEQLCDLRLD-CSHYCHNAPEGLICSCPPDLHLQP 1201
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D + C + C+ G CSQ C Y C C +GYVLE D TCK+ + + ++I SNR
Sbjct: 1202 DRIHCSKAHPCDTWGVCSQKCIAVGERYKCGCFKGYVLESDRFTCKSTSGATPYVIFSNR 1261
Query: 124 HSILVADL-----------------------------------EEK--------GKDHRA 140
H + +L ++K G
Sbjct: 1262 HELKAVELVTFNVKSFISSLKNTIALDFYYTKNANMVFWTDVIDDKIYRGTVVGGSLSNI 1321
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ +V +GL EGLA DWIG ++YW++S L++IEV +G R L + PR + +D
Sbjct: 1322 EVVVQTGLSTAEGLAVDWIGENLYWVESNLDQIEVAKLDGRFRRTLVAGEMESPRAVAVD 1381
Query: 201 PSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIST-KIY---WPNGLTLDIATRRVYFA 255
P G +LFWTDW N PRIER + G +R ++ KI WPNGLTLD RR+Y+
Sbjct: 1382 PRDG--YLFWTDWDNNAPRIERCSLAGLDREIVVRVDKIADAGWPNGLTLDYVLRRIYWI 1439
Query: 256 DSKLDFI 262
D++ D I
Sbjct: 1440 DARSDSI 1446
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 184/416 (44%), Gaps = 101/416 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EILSN 63
C+N T +C+G+ +C + +DE C + EC + CS C P+G C C G + +
Sbjct: 2922 CINDTLLCNGENNCGDFSDET-KCRINECTAQPPPCSQKCVDKPIGYECQCHTGYQTSAK 2980
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D+NEC +P CSQ+C NT+GS+ CSC GY+L D TC + + LI++N
Sbjct: 2981 DKHLCEDINECLARP--CSQLCRNTRGSFHCSCAPGYILHPDGRTCGSNSIVPVTLILAN 3038
Query: 123 RHSILVADL------------------------------------------EEKGKDHRA 140
R+ I D+ K
Sbjct: 3039 RYYIREIDMTGQSTLLAHNLTNAVALDYDWSSKCIYWSDVTQLGSSIKRLCNYKNSSSEI 3098
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ + L +GLA DW+G ++YW D L+ +EV +G R VL + +PR + LD
Sbjct: 3099 EVLHSPTLQNPDGLAVDWVGRNLYWCDKGLDTLEVSSLDGRFRRVLISKGLEEPRAVALD 3158
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +L+WTDWG + I + GMDGSN+ I+++ + WPN LT+ T+ +++AD++ D
Sbjct: 3159 PLRG--YLYWTDWGTHAHIGKAGMDGSNQQIIVNSSLGWPNALTISYETKELFWADARED 3216
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG------QL 314
+ I +++DG N ++S QL
Sbjct: 3217 Y----------------------------------IAVSDLDGHNIHRIMSREKNHYLQL 3242
Query: 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 370
+ A+D+ +Y WTDW E +ER N T I T ++ P
Sbjct: 3243 HHVFAIDIWEDYIY-----------WTDW-ETKSVERCHKYTGNNCTKIMTTVHRP 3286
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 134/549 (24%), Positives = 224/549 (40%), Gaps = 126/549 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C + K CD + DC NG DE C + +CS C PT G C CP G+
Sbjct: 135 ECAPIKKFCDKQRDCVNGGDEWDFCRNSTFSCDKLVCSYGCRPTGEGPKCFCPEGQ--RP 192
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN----------- 112
+ C D +ECE C+Q+C NT GS+ CSC GY E + C A+N
Sbjct: 193 EGSRCVDADECELDNTCAQVCKNTVGSFECSCVSGY--EKNGTDCVALNVPPALDASIVF 250
Query: 113 -------------------------HSAAFLIISNRHSIL---------------VADLE 132
+S A + N HSI + D
Sbjct: 251 STQAEIARLKLSGEAWSSNSSLQLLNSTALEFVFNNHSICYVHHNFSKASLVCVNIDDFS 310
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
+K + + Q ++ + V+ +A DW+ + Y+LD + VC E +L +++++
Sbjct: 311 QK-TELKTQSTLLE-FESVQQMAMDWVSRNWYFLDDQREIFLVCSERLEWCNILIENDLS 368
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
+PR + LDP+ G ++F+T WG +P +ER MDGS R +++ KI +P G+T+D T+
Sbjct: 369 KPRALALDPTRG--YMFFTKWGHSPPMVERCKMDGSERKAVVNHKIVYPYGVTVDYPTQH 426
Query: 252 VYFADSKLDFID------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKA 299
+Y+ D+ LDF++ + L+++ S RKLY N + +++ K
Sbjct: 427 IYWVDTYLDFVERVDYDGKDRKTIMRGLKVQNLYGISVFQRKLYLSSWYSNDI-IELDKF 485
Query: 300 NMD--------GSNASILVSGQLYEALA------------LDLENGMLYYSTLKC----- 334
M ++LV + + + L + N + KC
Sbjct: 486 TMKEKILVQNISRPFNVLVYHRQRQPVVPHPCNSHSDCSHLCISNWKRDIAVKKCLCAAG 545
Query: 335 --------------TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
R+L G+ I+ I +D + + I T I P + D+ T
Sbjct: 546 YQMTENNQCVVKPSQRYLLLAK-GKPASIKGIELDSNKETMIPITGINQPMAIDYDVKTG 604
Query: 381 RVYFADSKLDFIDFCNYDGTGRQQV----------ILIDLM---VEFTNDLMGDNGVPAL 427
+ ++DS I+ + + + + + D M V +T++ MG GV L
Sbjct: 605 TIIYSDSHRKVIEGAKINDSSHKTIFQKNVRRCDGLAFDWMSRNVYWTDEEMGSIGVFKL 664
Query: 428 ALDLENGML 436
A +N +L
Sbjct: 665 ANSSQNRIL 673
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 177/424 (41%), Gaps = 90/424 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGC----DLAECKHKFGLCSNTCHPTPLGALCTCPPGE 59
+C+ CDG DC +G+DEG C D + K F + C L LC
Sbjct: 2878 KCIMDLLKCDGNDDCGDGSDEGKDCHNEGDYCKGKGWFHCGNGVCINDTL--LCNGENNC 2935
Query: 60 ILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGY-VLEYDNHTCKAINHSAAF 117
+D C+ +NEC QP CSQ C + Y C C+ GY D H C+ IN A
Sbjct: 2936 GDFSDETKCR-INECTAQPPPCSQKCVDKPIGYECQCHTGYQTSAKDKHLCEDINECLAR 2994
Query: 118 ----LIISNRHSILVA-----DLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS 168
L + R S + L G+ + IV L L
Sbjct: 2995 PCSQLCRNTRGSFHCSCAPGYILHPDGRTCGSNSIVPVTLILA----------------- 3037
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGS 227
NR + + + T + L N+T + LD ++ ++W+D + I+R+ +
Sbjct: 3038 --NRYYIREIDMTGQSTLLAHNLTN--AVALDYDWSSKCIYWSDVTQLGSSIKRLCNYKN 3093
Query: 228 NRSTI---ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYW 284
+ S I S + P+GL +D R +Y+ D LD +LE+
Sbjct: 3094 SSSEIEVLHSPTLQNPDGLAVDWVGRNLYWCDKGLD-----TLEV--------------- 3133
Query: 285 IDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTD 342
+++DG +L+S L E A+ALD G LY WTD
Sbjct: 3134 --------------SSLDGRFRRVLISKGLEEPRAVALDPLRGYLY-----------WTD 3168
Query: 343 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
WG + I + GMDGSN+ I+++ + WPN LT+ T+ +++AD++ D+I + DG
Sbjct: 3169 WGTHAHIGKAGMDGSNQQIIVNSSLGWPNALTISYETKELFWADAREDYIAVSDLDGHNI 3228
Query: 403 QQVI 406
+++
Sbjct: 3229 HRIM 3232
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 101/232 (43%), Gaps = 59/232 (25%)
Query: 135 GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL---DSRLNRIEVCDE----NGTNRIVLA 187
G DHR I+V G VEGLAY+ + +YW + +NR+ + D+ + +IV
Sbjct: 2244 GTDHR---IIVEGQGSVEGLAYEQVHNMLYWTCNNHATINRVNLTDQMTNSSQVEQIVRL 2300
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW-GENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 246
+ +PRG+ +D S G R +FWT+W P IER+ + G NR II T I PN LTLD
Sbjct: 2301 RSQ-DKPRGIAVD-SCGAR-VFWTNWNSHQPSIERVFLSGYNREAIIKTDIRMPNALTLD 2357
Query: 247 IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
+++Y+ D++LD KI + DGSN
Sbjct: 2358 HKAQKLYWGDARLD----------------------------------KIERCEYDGSNR 2383
Query: 307 SILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSN 358
IL AL + +++WTDW + + + G N
Sbjct: 2384 VILAKVTPQHPFALAVY-----------ADYIYWTDWMLHAVLRADKLTGQN 2424
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 118/296 (39%), Gaps = 60/296 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV ++ +CDG C +G+DE P H+F N C P TC G + N
Sbjct: 3717 CVPVSFLCDGHDQCEDGSDEDP-----HICHRF----NICPPDQF----TCKNGHCIKN- 3762
Query: 65 SVTCQDMNECEQPG-------------YCSQMCTNTKG---------------------- 89
S+ C N+C CSQ+C K
Sbjct: 3763 SLRCDGRNDCSDNSDEENCNNSTCKWNTCSQICIEAKHNVPVLLVSEAELRLMSPYKPGD 3822
Query: 90 -----SYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDI- 143
S + GY ++ + A + N+ V + + R D+
Sbjct: 3823 SNKLRSKTLATAPGYKVDAVDILYGRTESVAFWTDHQNKRIQSVVLRLNESRARRDSDVR 3882
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
V SGL G++ DW+ +Y D RI +G + + + QPR +++ P
Sbjct: 3883 TVTSGLHDPRGISVDWVARRLYVTDGV--RILASTIDGLYVYTVLRGEMKQPRDIVVVPQ 3940
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
G LFW+DWG RIE MDG+ R ++++ I +P GL +D TRR+Y+AD K
Sbjct: 3941 DGV--LFWSDWGPPARIETAHMDGNKRRVLVNSAILYPTGLAVDYTTRRLYWADPK 3994
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 104/249 (41%), Gaps = 33/249 (13%)
Query: 96 NEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLA 155
N+ ++YD T +I S+ H ++ + H+ I + +GLA
Sbjct: 592 NQPMAIDYDVKT--------GTIIYSDSHRKVIEGAKINDSSHKT--IFQKNVRRCDGLA 641
Query: 156 YDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
+DW+ ++YW D + I V N + +L +D P ++LDP G ++W DW
Sbjct: 642 FDWMSRNVYWTDEEMGSIGVFKLANSSQNRILLQDAFYNPLSIVLDPGRGV--MYWADWS 699
Query: 215 E----NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE-I 269
RI + MDG N + I WP+GLT+D +R+Y++D L I+ +
Sbjct: 700 SIYPNKGRIHVVNMDGKNLKDFVEVNIDWPSGLTIDFVEKRLYWSDRHLRKIESVDFNGV 759
Query: 270 KTNVNYSTIFR----------KLYWIDEGGNGVPL----KIGKANMDGSNASILVSGQLY 315
V + + K + E G + K G +D SN I +LY
Sbjct: 760 NRRVELAKVMETPFGLALGPGKTLYFTEFTKGTVMAYNNKTGFRQLDQSNPPIF-DIKLY 818
Query: 316 EALALDLEN 324
+A A EN
Sbjct: 819 DATAQQGEN 827
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 17/151 (11%)
Query: 148 LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
+D + GLA DWI G++YW DS+ IEV +G+ + VL + I +P + +DP+ G
Sbjct: 1948 VDWLTGLAVDWIAGNMYWCDSKRGVIEVARLDGSKQHVLLANEIGKPTAIAVDPARGVMV 2007
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI----- 262
W PR+E MDG NR+ ++++ + + +TLD R+VYF D+ I
Sbjct: 2008 -----WAGGPRLEIATMDGRNRNLLVNSSVAISD-VTLDSDQRKVYFCDTSRHTIEVIGY 2061
Query: 263 DCKSLEIKTN------VNYSTIFRKLYWIDE 287
D E+ N + + KLYW+D+
Sbjct: 2062 DGSGHEVLVNDTLENPTALTILDDKLYWLDK 2092
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 41/231 (17%)
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
P R+L G+ I+ I +D + + I T I P + D+ T + ++DS I
Sbjct: 558 PSQRYLLLAK-GKPASIKGIELDSNKETMIPITGINQPMAIDYDVKTGTIIYSDSHRKVI 616
Query: 263 DCKSLEIKTNVNYSTIFRK----------------LYWIDE--GGNGVPLKIGKANMDGS 304
+ + + ++ TIF+K +YW DE G GV K+ + S
Sbjct: 617 EGAKI---NDSSHKTIFQKNVRRCDGLAFDWMSRNVYWTDEEMGSIGV-FKLANS----S 668
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE----NPRIERIGMDGSNRS 360
IL+ Y L++ L+ G ++W DW RI + MDG N
Sbjct: 669 QNRILLQDAFYNPLSIVLDPGRGV---------MYWADWSSIYPNKGRIHVVNMDGKNLK 719
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
+ I WP+GLT+D +R+Y++D L I+ +++G R +V L +M
Sbjct: 720 DFVEVNIDWPSGLTIDFVEKRLYWSDRHLRKIESVDFNGVNR-RVELAKVM 769
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 10/140 (7%)
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
Y + LYW I + N+ + S Q+ + + L ++ + C
Sbjct: 2262 YEQVHNMLYWTCNNH----ATINRVNL---TDQMTNSSQVEQIVRLRSQDKPRGIAVDSC 2314
Query: 335 TRWLFWTDW-GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
+FWT+W P IER+ + G NR II T I PN LTLD +++Y+ D++LD I+
Sbjct: 2315 GARVFWTNWNSHQPSIERVFLSGYNREAIIKTDIRMPNALTLDHKAQKLYWGDARLDKIE 2374
Query: 394 FCNYDGTGRQQVILIDLMVE 413
C YDG+ R VIL + +
Sbjct: 2375 RCEYDGSNR--VILAKVTPQ 2392
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 167/426 (39%), Gaps = 117/426 (27%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALC----TCPPGE 59
C+N CDG+ DC +G+DE C L C +F ++TC P+ LC C G
Sbjct: 3678 CINEDWRCDGQKDCEDGSDEM-FCSLVGCLPGRFRCKNHTC--VPVSFLCDGHDQCEDGS 3734
Query: 60 ILSNDSVTCQDMNECE------QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH 113
D C N C + G+C + G CS N +N TCK +
Sbjct: 3735 --DEDPHICHRFNICPPDQFTCKNGHCIKNSLRCDGRNDCSDNSDEE-NCNNSTCKW--N 3789
Query: 114 SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI 173
+ + + I +H++ V ++VS +L Y
Sbjct: 3790 TCSQICIEAKHNVPV--------------LLVSEAELRLMSPY----------------- 3818
Query: 174 EVCDENGTNRIVLAKDNITQPRGMMLDP-----SPGTRWLFWTDWGENPRIE----RIGM 224
+ G + + +K T P G +D FWTD +N RI+ R+
Sbjct: 3819 ----KPGDSNKLRSKTLATAP-GYKVDAVDILYGRTESVAFWTD-HQNKRIQSVVLRLNE 3872
Query: 225 DGSNRST---IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRK 281
+ R + +++ ++ P G+++D RR+Y D
Sbjct: 3873 SRARRDSDVRTVTSGLHDPRGISVDWVARRLYVTDG------------------------ 3908
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA--LALDLENGMLYYSTLKCTRWLF 339
++I + +DG ++ G++ + + + ++G+L F
Sbjct: 3909 ------------VRILASTIDGLYVYTVLRGEMKQPRDIVVVPQDGVL-----------F 3945
Query: 340 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
W+DWG RIE MDG+ R ++++ I +P GL +D TRR+Y+AD K ++ +DG
Sbjct: 3946 WSDWGPPARIETAHMDGNKRRVLVNSAILYPTGLAVDYTTRRLYWADPKTMTVETVKFDG 4005
Query: 400 TGRQQV 405
+ R V
Sbjct: 4006 SDRHVV 4011
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 98/238 (41%), Gaps = 60/238 (25%)
Query: 208 LFWTDWGENPRIERIGMDGSNRSTII-------STKIYWPNGLTLDIATRRVYFADSKLD 260
LFW D + I I DG+ R II S + W GL +D +Y+ DSK
Sbjct: 1913 LFWAD-SDRGSITSIKRDGTQRRHIIEPTEAMDSVPVDWLTGLAVDWIAGNMYWCDSKRG 1971
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--AL 318
I+ A +DGS +L++ ++ + A+
Sbjct: 1972 VIE----------------------------------VARLDGSKQHVLLANEIGKPTAI 1997
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 378
A+D G++ W PR+E MDG NR+ ++++ + + +TLD
Sbjct: 1998 AVDPARGVMV--------------WAGGPRLEIATMDGRNRNLLVNSSVAISD-VTLDSD 2042
Query: 379 TRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGML 436
R+VYF D+ I+ YDG+G +V++ D + T + D+ + L E G L
Sbjct: 2043 QRKVYFCDTSRHTIEVIGYDGSG-HEVLVNDTLENPTALTILDDKLYWLDKTFEKGSL 2099
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 122/310 (39%), Gaps = 53/310 (17%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q ++ +GL GLA DW+ ++ + + D I+ DN+ + +
Sbjct: 1637 QTLIDTGLKNPSGLAIDWLSNLMFVSSPQGITVSNLDAEFITTII---DNLNV---LSVA 1690
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD---- 256
P LFW IE MDGS R+ I++ + L +D+ ++Y+
Sbjct: 1691 AHPRLGQLFWIATTNETFIETSAMDGSKRTKIVTGLQSHSHSLCVDLHADKLYWVSEFEI 1750
Query: 257 --SKLDFIDCKSLEI-KTNVNYSTIFRK-LYWIDEGGNGVPLKIGKANMDGSNASILV-- 310
S LD D L++ +V +T++++ +Y+ D+ + + + M G N +IL
Sbjct: 1751 YFSNLDGKDVTKLKLPHVSVLAATVYQEHVYYADDDDHTIHI---VDKMTGGNDTILRNN 1807
Query: 311 SGQLYEALALDLENGMLYY----------------STLKCTRWLFWTDWGENP------- 347
+G ++ D ++ +T +C + +NP
Sbjct: 1808 TGSVFALRIYDPMEQKGFHPCANSQCSDLCLPTSATTFRCRCATGYHTDPQNPNKCVGVE 1867
Query: 348 ---------RIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
I + ++G+N++ ++ ++I + + +++ADS I
Sbjct: 1868 EFIFYSVNWEIRGLALNGNNQTAVLGPISRISMATAIDFVAESDLLFWADSDRGSITSIK 1927
Query: 397 YDGTGRQQVI 406
DGT R+ +I
Sbjct: 1928 RDGTQRRHII 1937
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 24/160 (15%)
Query: 292 VPLKIGKAN------MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
VP+ + AN +D + S L++ L A+ALD Y + KC W T G
Sbjct: 3030 VPVTLILANRYYIREIDMTGQSTLLAHNLTNAVALD------YDWSSKCIYWSDVTQLGS 3083
Query: 346 N-PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
+ R+ S + S + P+GL +D R +Y+ D LD ++ + DG R+
Sbjct: 3084 SIKRLCNYKNSSSEIEVLHSPTLQNPDGLAVDWVGRNLYWCDKGLDTLEVSSLDGRFRR- 3142
Query: 405 VILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAE 444
+LI +E A+ALD G LY++ G
Sbjct: 3143 -VLISKGLEEPR---------AVALDPLRGYLYWTDWGTH 3172
>gi|344235640|gb|EGV91743.1| Low-density lipoprotein receptor-related protein 8 [Cricetulus
griseus]
Length = 764
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 155/312 (49%), Gaps = 61/312 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC---------------DLAECKHKFGLCSNTCHPTPL 49
CV K C+ + DCP+G+DE GC L EC H G CS+ C +
Sbjct: 158 CVLAIKRCNQEHDCPDGSDEA-GCLQVAPTFQRNRRRPRGLNECLHNNGGCSHICTDLKI 216
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
G CTCP G L D TC D++EC+ P CSQ+C N KG + C C+ GY ++ CK
Sbjct: 217 GFECTCPAGFQLL-DQKTCGDIDECQDPDACSQICVNYKGYFKCECHPGYEMDSQTKNCK 275
Query: 110 AINHSAAFLIISNRHSILVADLEEKG--------KDHRAQDIVVS--------------- 146
A+ + LI +NRH + DL ++ K+ + D+ V+
Sbjct: 276 AVAGKSPSLIFTNRHEVRRIDLVKRDYSRLIPMLKNVVSLDVEVATNRIYWCDLSYRKIY 335
Query: 147 -------------------GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
L EGLA DW+ HIYW DS I V +G R L
Sbjct: 336 SAHMDKASIPDEQVVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGRRRCTLF 395
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+++PR + +DP G +++W+DWG +IE+ G++G++R T++S I WPNG+TLD+
Sbjct: 396 SRELSEPRAIAVDPLRG--FMYWSDWGFQAKIEKSGLNGADRQTLVSDNIEWPNGITLDL 453
Query: 248 ATRRVYFADSKL 259
++R+Y+ DSKL
Sbjct: 454 LSQRLYWVDSKL 465
>gi|348550372|ref|XP_003461006.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
[Cavia porcellus]
Length = 848
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 151/298 (50%), Gaps = 48/298 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ DCP+G+DE GC L EC H G CS+ C +G C+CP G L
Sbjct: 196 CVLEIKRCNQARDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKMGFECSCPAGLRLL 254
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D+ TC D++ECE P CSQ+C N KG + C C+ GY ++ CKA+ LI +N
Sbjct: 255 -DNKTCGDIDECEDPDVCSQICVNYKGYFKCECHPGYEMDTLTKNCKAVAGKNPSLIFTN 313
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K + Q
Sbjct: 314 RHEVQRIDLVKRDYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSANMDKASNPADQ 373
Query: 142 DIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++++S L EGLA DW+ HIYW DS I V +G R L ++++PR + +D
Sbjct: 374 EVLISEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATLDGRRRCTLFSRDLSEPRAIAVD 433
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
P G +++W+DWG +IE+ G++G +R T++S I WPNG+ LD+ +R+Y+ DSK
Sbjct: 434 PLRG--FMYWSDWGYQAKIEKAGLNGMDRQTLVSYNIEWPNGIALDLLNQRLYWVDSK 489
>gi|432117303|gb|ELK37690.1| Low-density lipoprotein receptor-related protein 2 [Myotis davidii]
Length = 1645
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 141/532 (26%), Positives = 229/532 (43%), Gaps = 103/532 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C++L+ VCDGK DC +G+DEG C + C CS+TC+P+P G +C C G L +
Sbjct: 849 CLHLSLVCDGKEDCADGSDEGGQCSASACGQ--AQCSHTCYPSPRGPICACEQGFELKSS 906
Query: 65 SVTCQDMNECEQPG--YCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII-- 120
+C+D++EC++ G CSQ C NT+GSY C+C+ GY+LE D HTCKA L+
Sbjct: 907 GGSCEDVDECQRSGGRPCSQTCINTEGSYHCTCHPGYLLEPDGHTCKATGTEPILLVAIQ 966
Query: 121 ---------SNRHSILVAD-------------LEEK--------------GKDHRAQDIV 144
S + IL A L++K D + + V
Sbjct: 967 FNLLLYGLRSLKEDILAATEKNLVIFSIDYDLLDQKVFWTELGAESIKWISMDAKKKGTV 1026
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-----IVLAKDNITQPRGMML 199
V G+ + + DWIG ++YW D +I R ++ DN+ QPR + L
Sbjct: 1027 VKGIK-SDCMVVDWIGRNLYWTDGTAGQILAIQLTAVWRGKPEYTIVLGDNLNQPRSLAL 1085
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G ++W++ G P IE+ GMDGS R +I+ + WP + LD + +++++D K
Sbjct: 1086 DPLNGL--MYWSEIGGEPHIEQAGMDGSRRKVLINKGLGWPTSIVLDQLSWKIFWSDDKF 1143
Query: 260 DFIDCKSL-----------EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
I +L +IK+ + + + +++W + V M G + ++
Sbjct: 1144 HCIGSANLDGTGISMLQLTQIKSPFSVAVLEDEVFWSETKTRTVQR---MKKMTGKSRAV 1200
Query: 309 LVS------GQLYEALAL-DLENGMLYYSTLKCTRWLFW--------------TDW---- 343
L+ G + L L +L NG + LK + L W DW
Sbjct: 1201 LIKRIEQPYGLKEKTLYLSELGNGDIRLLRLKESGKLSWRKILSAKGTVINLAVDWLSGN 1260
Query: 344 -----GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
ENP I G + + S + P + L T + + F+D + D
Sbjct: 1261 IYWIDSENPHINVASSKGQYSTVLFSNNLSHPTCVALHPPT-------AIMCFVDLGSQD 1313
Query: 399 GTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENG--MLYYSTEGAEFLKT 448
G GR I M ++ + L + +Y++ G F+++
Sbjct: 1314 GGGRGSSIDCASMDGIRRKVLWQKSQVPVGLTFSDSGTRVYWADTGRGFIES 1365
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 121/283 (42%), Gaps = 54/283 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADE---GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
CV T+ CDG DC + +DE G C LA G C C G C+C G L
Sbjct: 208 CVMETRTCDGINDCGDSSDEDICGKSCSLAN-----GGCEGQCSDASWGVRCSCGTGWQL 262
Query: 62 SNDSVTCQDMNECEQP-GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
D +C D++EC C Q+C NT GSY C C +GY L Y+ C+ I
Sbjct: 263 QPDGQSCGDIDECSMAYSPCDQLCHNTPGSYSCGCTQGYQL-YNGTRCQVIE-------- 313
Query: 121 SNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS--RLNRIEVCDE 178
L V ++ DW G +YW S R+ + D
Sbjct: 314 ---------------------------LKTVNSVSLDWFTGQLYWASSFARVICAGLSDG 346
Query: 179 NGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN--PRIERIGMDGSNRSTIISTK 236
G RI L KD + P +++ P ++L+W + G+ I+ GMDGS+R +
Sbjct: 347 RGYVRI-LEKDLV--PEQLIVFPV--KKYLYWVNRGQKGMRTIDTAGMDGSDRKVLAVVN 401
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIF 279
+ P GLTLD T R+Y+ + + I+ +++ + IF
Sbjct: 402 MEDPVGLTLDHVTGRLYWISAYKESIETVNVDGSGRHTFPQIF 444
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 336 RWLFWTDWGEN--PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
++L+W + G+ I+ GMDGS+R + + P GLTLD T R+Y+ + + I+
Sbjct: 369 KYLYWVNRGQKGMRTIDTAGMDGSDRKVLAVVNMEDPVGLTLDHVTGRLYWISAYKESIE 428
Query: 394 FCNYDGTGRQ---QVILID 409
N DG+GR Q+ L D
Sbjct: 429 TVNVDGSGRHTFPQIFLED 447
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 112/290 (38%), Gaps = 41/290 (14%)
Query: 131 LEEKGKD-HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E+ G D R + ++ GL + D + I+W D + + I + +GT +L
Sbjct: 1103 IEQAGMDGSRRKVLINKGLGWPTSIVLDQLSWKIFWSDDKFHCIGSANLDGTGISMLQLT 1162
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
I P + + +FW++ M G +R+ +I +I P GL
Sbjct: 1163 QIKSPFSVAVLEDE----VFWSETKTRTVQRMKKMTGKSRAVLIK-RIEQPYGL----KE 1213
Query: 250 RRVYFADSKLDFIDCKSLEIKT-----------------NVNYSTIFRKLYWIDEGGNGV 292
+ +Y S+L D + L +K N+ + +YWID
Sbjct: 1214 KTLYL--SELGNGDIRLLRLKESGKLSWRKILSAKGTVINLAVDWLSGNIYWIDSENP-- 1269
Query: 293 PLKIGKANMDGSNASILVSGQLYEA--LALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
I A+ G +++L S L +AL ++ + L G I+
Sbjct: 1270 --HINVASSKGQYSTVLFSNNLSHPTCVALHPPTAIMCFVDLGSQ-----DGGGRGSSID 1322
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
MDG R ++ K P GLT + RVY+AD+ FI+ DG+
Sbjct: 1323 CASMDGIRRK-VLWQKSQVPVGLTFSDSGTRVYWADTGRGFIESIQQDGS 1371
>gi|345314268|ref|XP_003429480.1| PREDICTED: prolow-density lipoprotein receptor-related protein
1-like, partial [Ornithorhynchus anatinus]
Length = 1098
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/352 (33%), Positives = 172/352 (48%), Gaps = 74/352 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
RCV ++CDG+ DC +G+DE L C C PG L +
Sbjct: 461 RCVGEGQLCDGQNDCGDGSDE------------------------LNCHCRCRPGFRLKD 496
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEY-DNHTCKAINHSAAFLIISN 122
D TC D++EC CSQ C NT GSY C C +GY D H+CKA+ FLI +N
Sbjct: 497 DGKTCVDVDECSTTFPCSQRCVNTAGSYKCLCVDGYRPRAGDPHSCKAVTDEEPFLIFAN 556
Query: 123 RHSILVADLEEKGK---------------DHRAQ-----DIVV----------------- 145
R+ + +L+ D+R Q D+
Sbjct: 557 RYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMNINGSNVQV 616
Query: 146 ---SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 617 LHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDVR 676
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+WTDWG++ I RIGMDGS+RS ++ T+I WPNGLTLD R+Y+AD++ D+I
Sbjct: 677 HG--YLYWTDWGDHSLIGRIGMDGSSRSVVVDTRITWPNGLTLDSVNDRIYWADAREDYI 734
Query: 263 DCKSLEIKTNVNYS-TIFRK-LYWIDEGGNGVPLKIGKAN-MDGSNASILVS 311
+ L ++ T+F +YW D I +A+ G+N ++L+S
Sbjct: 735 EFAMLSQDVPHIFALTLFEDFVYWTDWETK----SISRAHKTSGANQTLLIS 782
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 562 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMNING 611
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 612 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 669
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D+ +G LY++ G L
Sbjct: 670 ---------ALVVDVRHGYLYWTDWGDHSL 690
>gi|1389559|gb|AAB02882.1| glycoprotein 330, partial [Homo sapiens]
Length = 1751
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 181/410 (44%), Gaps = 96/410 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ + K+C+ DC + +DE GC + EC C + C T C+C PG L
Sbjct: 383 RCIEMMKLCNHLDDCLDNSDEK-GCGINECHDPSISGCDHNCTDTLTSFYCSCRPGYKLM 441
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P CSQ C N GSYIC C GY+ E D TC+ ++ +LI S
Sbjct: 442 SDKRTCVDIDECTEMPFVCSQKCENVIGSYICKCAPGYLREPDGKTCRQNSNIEPYLIFS 501
Query: 122 NRH--------------------SILVADLEEKGK------------------DHRAQDI 143
NR+ +++ D + K + I
Sbjct: 502 NRYYLRNLTIDGYFYSLILEGLDNVVALDFDRVEKRLYWIDTQRQVIERMFLNKTNKETI 561
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPR 195
+ L E LA DW+ +YWLD+RL+ + V D NG +R +LA+ + PR
Sbjct: 562 INHRLPAAESLAVDWVSRKLYWLDARLDGLFVSDLNGGHRRMLAQHCVDANNTFCFDNPR 621
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G+ L P G +L+W DWG I R+GMDG+N+S IISTK+ WPNG+T+D +Y+A
Sbjct: 622 GLALHPQYG--YLYWADWGHRAYIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWA 679
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ L +I+ LE G + + G L
Sbjct: 680 DAHLGYIEYSDLE----------------------------------GHHRHTVYDGALP 705
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ + +Y WTDW + DGSNR T+++T
Sbjct: 706 HPFAITIFEDTIY-----------WTDWNTRTVEKGNKYDGSNRQTLVNT 744
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 141/320 (44%), Gaps = 63/320 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLA-ECKHKFGLCSNTCHPTPLGA-LCTCPPG-EI 60
C+ VCD DC + +DE GC+ E +C C G +C+C G E
Sbjct: 1237 HCIPHDNVCDDADDCGDWSDE-LGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFET 1295
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN--HTCKAINHSAAFL 118
D +C D+NECEQ G C Q C NTKGSY C C +G+ D C A S L
Sbjct: 1296 NVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAAEGSSPLLL 1355
Query: 119 IISN-----------RHSILVADLE----------------------------------- 132
+ N R S + D E
Sbjct: 1356 LPDNVRIRKYNLSSERFSEYLQDEEYIQAVDYDWDPEDIGLSVVYYTVRGEGSRFGAIKR 1415
Query: 133 ------EKGKDHRAQ--DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
E G+++ Q D+ + + +G+A DW+G HIYW D + RIEV +G R
Sbjct: 1416 AYIPNFESGRNNLVQEVDLKLKYVMQPDGIAVDWVGRHIYWSDVKNKRIEVAKLDGRYRK 1475
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L ++ QP + ++P G +FWTDWG+ P++E M+G + + ++ + WP GL+
Sbjct: 1476 WLISTDLDQPAAIAVNPKLGL--MFWTDWGKEPKLESAWMNGEDPNILVFEDLGWPTGLS 1533
Query: 245 LD-IATRRVYFADSKLDFID 263
+D + R+Y++D K D I+
Sbjct: 1534 IDYLNNDRIYWSDFKEDVIE 1553
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 175/452 (38%), Gaps = 96/452 (21%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT-----CPP 57
+RC+ +VC+G DC +G DE C+ PTP CT C
Sbjct: 1192 NRCIYSHEVCNGVDDCGDGTDETE----EHCRK----------PTP--KPCTEYEYKCGN 1235
Query: 58 GEILSNDSVTCQDMNECEQ----------------PGYCSQMCTN-TKGSYICSCNEGYV 100
G + +D+V C D ++C C Q CT +G +ICSC G+
Sbjct: 1236 GHCIPHDNV-CDDADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFE 1294
Query: 101 LE-YDNHTCKAINHSAAFLIISNR-------HSILVADLEEKGKDHRAQDIVVSGLDLVE 152
+D +C IN F + + AD D + G +
Sbjct: 1295 TNVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAAEGSSPLL 1354
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
L D + Y L S + DE + A D P + G +++T
Sbjct: 1355 -LLPDNVRIRKYNLSSERFSEYLQDE----EYIQAVDYDWDPEDI------GLSVVYYTV 1403
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN 272
GE R I + Y PN + V D KL ++
Sbjct: 1404 RGEGSRFGAI------------KRAYIPNFESG--RNNLVQEVDLKLKYV-----MQPDG 1444
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYS 330
+ + R +YW D +I A +DG L+S L + A+A++ + G++
Sbjct: 1445 IAVDWVGRHIYWSDVKNK----RIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLGLM--- 1497
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKL 389
FWTDWG+ P++E M+G + + ++ + WP GL++D + R+Y++D K
Sbjct: 1498 --------FWTDWGKEPKLESAWMNGEDPNILVFEDLGWPTGLSIDYLNNDRIYWSDFKE 1549
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
D I+ YDGT R +VI + M ++ D+ D
Sbjct: 1550 DVIETIKYDGTDR-RVIAKEAMNPYSLDIFED 1580
>gi|432112067|gb|ELK35095.1| Prolow-density lipoprotein receptor-related protein 1 [Myotis
davidii]
Length = 4213
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 157/304 (51%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDGK DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1126 CLPPDKLCDGKDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1183
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
DS TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1184 DSHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1243
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL++ +GK D+ A +
Sbjct: 1244 HEIRRIDLQKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1303
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1304 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1363
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R TI + WPNGLT+D +R+ + D++
Sbjct: 1364 RDGI--LFWTDWDASLPRIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDAR 1421
Query: 259 LDFI 262
D I
Sbjct: 1422 SDAI 1425
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 165/323 (51%), Gaps = 65/323 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCS-----NTCHPTPLGALCTCPPGE 59
C+ ++++C+G DC +G+DEG A C+ G CS + C PT G C C
Sbjct: 54 CIPMSRLCNGVQDCMDGSDEG-----AHCRELLGNCSQLGCQHHCVPTLNGPTCYCNNSF 108
Query: 60 ILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---A 116
L D TC+D +EC G CSQ+CTNT GS+ C C EGY+L+ DN +CKA N
Sbjct: 109 QLQADGKTCKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPP 168
Query: 117 FLIISNRHSIL------------------------------------VADLEEKGK---- 136
L+I+N +IL V D + +
Sbjct: 169 VLLIANSQNILATYLNGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDSAAQTQLKCA 228
Query: 137 ---------DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
D +I +S L VE +A DW+ G+ Y++D +RI VC+ NG + L
Sbjct: 229 RMPGLKGFVDEHTINISLS-LHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLL 287
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+
Sbjct: 288 DLELYNPKGIALDPTMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDL 345
Query: 248 ATRRVYFADSKLDFIDCKSLEIK 270
+R VY+AD+ LD+I+ E K
Sbjct: 346 VSRLVYWADAYLDYIEVVDYEGK 368
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 164/379 (43%), Gaps = 73/379 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
RC++ +CDG DC +G+DE C+ TC P +CP +
Sbjct: 2712 RCISKQWLCDGSDDCGDGSDEAAHCE-----------GKTCGPNSF----SCPGTHVCVP 2756
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
+ C +C S S N L++D +
Sbjct: 2757 ERWLCDGDKDCADGADESVAAGLLHLSPTQGLNNAVALDFD------YREQMIYWTDVTT 2810
Query: 124 HSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR 183
++ + G D Q + +GL +GLA DW+GG++YW D + IEV NG R
Sbjct: 2811 QGSMIRRMHLNGSD--VQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYR 2868
Query: 184 IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
VL + +PR +++D G +L+WTDWG++ I RIGMDGS RS I+ TKI WPNGL
Sbjct: 2869 TVLVSSGLREPRALVVDVQNG--YLYWTDWGDHSLIGRIGMDGSGRSVIVDTKITWPNGL 2926
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
TLD T R+Y+AD++ D+I+ SL DG
Sbjct: 2927 TLDYVTERIYWADAREDYIEFASL----------------------------------DG 2952
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTI 362
SN ++++ + AL L +Y WTDW E I R G+N++ +
Sbjct: 2953 SNRHVVLNQDIPHIFALTLFEDYVY-----------WTDW-ETKSINRAHKTTGANKTLL 3000
Query: 363 ISTKIYWPNGLTLDIATRR 381
IST ++ P L + A R+
Sbjct: 3001 IST-LHRPMDLHVFHALRQ 3018
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 169/431 (39%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1822 GDCSQLCLPTSESTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1878
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1879 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1938
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1939 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 1996
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 1997 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQEGKLYWCDARTDKIERIDLETGENREV 2056
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2057 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFN 2116
Query: 298 KANMDGSNASILVSGQ-----LYEA---LALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G LY A +GML C + + + E +
Sbjct: 2117 RDRQKGTNVCAVANGGCQQLCLYRGGGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 2176
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2177 KSIHLSDERNLNAPVQAFEDPKHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2235
Query: 396 NYDGTGRQQVI 406
N DG+GR ++
Sbjct: 2236 NDDGSGRTTIV 2246
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 102/187 (54%), Gaps = 17/187 (9%)
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI 296
IYW + T RR++ S + + L + + LYW D+G + + +
Sbjct: 2803 IYWTDVTTQGSMIRRMHLNGSDVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEV-- 2860
Query: 297 GKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+ ++G+ ++LVS L E AL +D++NG LY WTDWG++ I RIGM
Sbjct: 2861 --SKLNGAYRTVLVSSGLREPRALVVDVQNGYLY-----------WTDWGDHSLIGRIGM 2907
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
DGS RS I+ TKI WPNGLTLD T R+Y+AD++ D+I+F + DG+ R V+ D+ F
Sbjct: 2908 DGSGRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVVLNQDIPHIF 2967
Query: 415 TNDLMGD 421
L D
Sbjct: 2968 ALTLFED 2974
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 452 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 510
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 511 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 570
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 571 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 628
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 629 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 688
Query: 261 FID 263
I+
Sbjct: 689 RIE 691
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 16/137 (11%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 263 FYFVDD----IDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPTMGK---------VFFT 309
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 310 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 369
Query: 402 RQ---QVILIDLMVEFT 415
RQ Q ILI+ + T
Sbjct: 370 RQTIIQGILIEHLYGLT 386
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 132/328 (40%), Gaps = 59/328 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N + C+C L+ DN TC FL+ + + I DL+
Sbjct: 1514 GPCSHLCLINYNRTVSCACPHLMKLQKDNTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1570
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1571 NYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1629
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1630 LAVDWM--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1676
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I ANMDGSN ++L SGQ
Sbjct: 1677 --------------------HPLRGKLYWTD-GDN-----ISMANMDGSNRTLLFSGQRG 1710
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY W G N I R +DGS+ I + +
Sbjct: 1711 PVGLAIDFPESKLY-----------WISSG-NHTINRCNLDGSDLEVIDAMRNQLGKATA 1758
Query: 375 LDIATRRVYFADSKLDFIDFCN-YDGTG 401
L I ++++AD + + CN DG+G
Sbjct: 1759 LAIMGDKLWWADQVSEKMGTCNKADGSG 1786
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 118/275 (42%), Gaps = 48/275 (17%)
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML-------DPSPGT-RWL 208
++ G +Y + L I + DE N V A ++ + ++ SPGT +
Sbjct: 2163 EYAGYLLYSERTILKSIHLSDERNLNAPVQAFEDPKHMKNVIALAFDYRAGTSPGTPNRI 2222
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
F++D I++I DGS R+TI+ + GL A +Y+
Sbjct: 2223 FFSDI-HFGNIQQINDDGSGRTTIVE-NVGSVEGLAYHRAWDTLYW-------------- 2266
Query: 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLY 328
T+ STI R + +D+ G + M G + A LD
Sbjct: 2267 --TSYTTSTITR--HTVDQTRVGAFERETVITMSGDDHP--------RAFVLD------- 2307
Query: 329 YSTLKCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 387
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+
Sbjct: 2308 ----ECQNLMFWTNWNEQHPSIMRAALSGANALTLIEKDIRTPNGLAIDHRAEKLYFSDA 2363
Query: 388 KLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
LD I+ C YDG+ R ++ + + F + G++
Sbjct: 2364 TLDKIERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2398
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 2227 IHFGNIQQINDDGSGRTTIVENVGSVEGLAYHRAWDTLYWTSYTTSTITRHTVDQTRVGA 2286
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2287 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANALTLIEKDIR 2344
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2345 TPNGLAIDHRAEKLYFSDATLDKIE 2369
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 14/106 (13%)
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
AA SNRH + ++G H + +SGL + G+A DW+ G++YW DS + IE
Sbjct: 3514 AAPPTTSNRHRREI----DRGVTH----LNISGLKMPRGIAIDWVAGNVYWTDSGRDVIE 3565
Query: 175 -VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRI 219
A T+P L PS ++W+DWG +P+I
Sbjct: 3566 XPTPGAPAGPPPSASSGPTRPHPFSL-PS----IMYWSDWGNHPKI 3606
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Query: 112 NHSAAFLIISNRHSILVADLEEKGKD-HRAQDIVVSGLDLVE-------GLAYDWIGGHI 163
+H AF++ ++ + + E+ RA + L L+E GLA D +
Sbjct: 2299 DHPRAFVLDECQNLMFWTNWNEQHPSIMRAALSGANALTLIEKDIRTPNGLAIDHRAEKL 2358
Query: 164 YWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTDW
Sbjct: 2359 YFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTDW 2404
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 14/146 (9%)
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDGSNRS 360
DG++ S+ +G L+ + L N + + + ++WTD + I R+ ++GS+
Sbjct: 2769 DGADESV-AAGLLHLSPTQGLNNAVALDFDYR-EQMIYWTDVTTQGSMIRRMHLNGSDVQ 2826
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMG 420
+ T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 2827 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR------ 2880
Query: 421 DNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 2881 -----ALVVDVQNGYLYWTDWGDHSL 2901
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1245 EIRRIDLQKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1294
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1295 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1345
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1346 ---TTLLAGDIEHPRAIALDPRDGILFWT 1371
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 24/154 (15%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 646 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 705
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIER--------IGMDGSNRSTIISTKI 237
+ G+ +LFWT++ G R+ER + + S R I ++
Sbjct: 706 GPELNHAFGLCHH----GNYLFWTEYRSGSVYRLERGAGGAPPTVTLLRSERPPIFEIRM 761
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
Y D ++V +++ C SL + T
Sbjct: 762 Y-------DAQQQQVGTNKCRVNNGGCSSLCLAT 788
>gi|213626895|gb|AAI70345.1| Low density lipoprotein receptor-1 [Xenopus laevis]
Length = 909
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 159/304 (52%), Gaps = 47/304 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + KVC+ K DC + +DE C EC G CS+ C+ +G C C G L
Sbjct: 286 ECITMDKVCNKKRDCRDWSDEPLKECGENECLRNNGGCSHICNDLKIGYECLCNEGYRLV 345
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D+NECE P CSQ+C N G Y C C EGY ++ +CK+I + A+L +N
Sbjct: 346 -DQKRCEDINECENPNTCSQICINLVGGYKCECREGYQMDPVTASCKSIG-TVAYLFFTN 403
Query: 123 RH--------------------SILVADLE---------------------EKGKDHRAQ 141
RH +++ D+E EK +
Sbjct: 404 RHEVRKMTLDRSEYTSVIPRLKNVVALDMEIASNKIYWSDLTQRKIYSASMEKADNTSHH 463
Query: 142 DIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ V+S + +G+A DWI G+IYW DS+ + I V + G+ R L D++ +PR +++D
Sbjct: 464 ETVISNQIQAPDGIAVDWIHGNIYWTDSKFSTISVANTVGSKRRTLFSDDLEKPRDIVVD 523
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
PS G +++WTDWG +IE+ G++G +R +++ I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 524 PSQG--FMYWTDWGLPAKIEKGGLNGVDRYPLVTENIEWPNGITLDLINQRLYWVDSKLH 581
Query: 261 FIDC 264
+ C
Sbjct: 582 SLSC 585
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 26/152 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
++ K +D S + ++ +L +ALD+E + ++W+D + +I M
Sbjct: 406 EVRKMTLDRSEYTSVIP-RLKNVVALDMEIA---------SNKIYWSDLTQR-KIYSASM 454
Query: 355 DG----SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ S+ T+IS +I P+G+ +D +Y+ DSK I N G+ R+ +
Sbjct: 455 EKADNTSHHETVISNQIQAPDGIAVDWIHGNIYWTDSKFSTISVANTVGSKRRTL----- 509
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
F++DL + +D G +Y++ G
Sbjct: 510 ---FSDDLEKPRDI---VVDPSQGFMYWTDWG 535
>gi|198469011|ref|XP_001354886.2| GA12483 [Drosophila pseudoobscura pseudoobscura]
gi|198146674|gb|EAL31942.2| GA12483 [Drosophila pseudoobscura pseudoobscura]
Length = 1994
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 152/306 (49%), Gaps = 48/306 (15%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCD-LAECKHKFGLCSNTCHPTPL-GALCTCPPGEI 60
+ C+ L KVCDG +DC +G+DE C+ +C K TCH GA C CP G
Sbjct: 293 EHCLELAKVCDGHSDCSDGSDEYETCNSKPDCSAKSCPAGATCHMMSTDGAQCYCPAGFR 352
Query: 61 LSNDSVTCQDMNECEQ--PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN-HSAAF 117
L+ C+D++EC++ CSQ C NT G Y CSC+ GY+L DN TC+A N H +
Sbjct: 353 LAKFQNKCEDIDECQERESELCSQSCENTSGGYRCSCDPGYLLAKDNRTCRAANTHGSDH 412
Query: 118 LIISNRHSILVADLEEKGKDH--------------------------------------- 138
++ + V + ++H
Sbjct: 413 PLLLYTTQMNVMGMHLGSRNHVYQVAGNLSKVIGVAYDGSHIYWTNIQNEAESIVKANAD 472
Query: 139 --RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
A+ ++ SGLD E LA DW+ +IY+ D+ + I VC + N +VL +++ QPRG
Sbjct: 473 GTHAEILLTSGLDAPEDLAVDWLTQNIYFSDNVMRHIAVCSHDALNCVVLVTEDVHQPRG 532
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ L P G +FWTDWG P I R MDG + I+S I+WPNG+ LD+ +R+Y+ D
Sbjct: 533 LALWPQRGQ--MFWTDWGVKPMIVRASMDGKRSTPIVSENIHWPNGIALDMHQQRIYWVD 590
Query: 257 SKLDFI 262
+KL +
Sbjct: 591 AKLGSV 596
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 131/306 (42%), Gaps = 62/306 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFG----LCSNTCHPTPLGALCTCPPGEI 60
CV++++VC+ DC NG+DEGP C A C+ G +C + C TP GA+C+C G
Sbjct: 1377 CVDMSRVCNSFPDCQNGSDEGPQCATA-CRASAGGGRPVCQHKCRATPAGAVCSCFDGYR 1435
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
L D +C D+NEC C+Q+C NT G Y C C+ ++L D +CK++ A L
Sbjct: 1436 LDTDQRSCVDVNECLDGQPCAQICENTLGGYQCQCHADFMLRQDRVSCKSLQAGATLLFS 1495
Query: 121 S----------------------NRHSILVADLEEK-GKDHRAQDIVVSGLDLVE----- 152
S +R D+E + G + VV +D+
Sbjct: 1496 SYNEVRNLSEQPMMLQVAWSANDSRIDGFDVDMERQMGYFSSEEQGVVYQVDMRRRFIVR 1555
Query: 153 --------GLAYDWIGGHIYWL--DSRLNRIEVCD--ENGTNRIVLAKDNITQPRGMMLD 200
+A DW G++Y L S I C RI+ K ++ R + +D
Sbjct: 1556 ALAVPSPTKVAVDWATGNVYVLAGGSASQEIYACSFPARMCGRILQVKTHM-HLRHLAID 1614
Query: 201 PSPGTRWLFWTDWGENPRIERIG----------MDGSNRSTIISTKIYWPNGLTLDIATR 250
G LF+ R+E G +DGS++ ++ K + L LD +
Sbjct: 1615 GYHGR--LFYIAM----RLEGFGHASAELHVARLDGSHKELMLHKKDSYMTALALDPHQQ 1668
Query: 251 RVYFAD 256
++Y+ D
Sbjct: 1669 QLYYLD 1674
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 176/444 (39%), Gaps = 88/444 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ + CDGK+DC + +DE GC ++ K L CP G L
Sbjct: 213 CIPIEFQCDGKSDCADSSDELDGCKESQASCKGHL---------------CPNGRCLQRK 257
Query: 65 SVTCQDMNEC----EQPGYCSQMCTNTKGSYICSCNEGYVLEY----DNH---------- 106
C +++C ++ G C +C G ++C N+ + LE D H
Sbjct: 258 QWLCDGVDDCGDGSDEHG-CVDLCQPEMGKFMCR-NKEHCLELAKVCDGHSDCSDGSDEY 315
Query: 107 -TC--------KAINHSAAFLIISNRHS-------ILVADLEEKGKD-----HRAQDIVV 145
TC K+ A ++S + +A + K +D R ++
Sbjct: 316 ETCNSKPDCSAKSCPAGATCHMMSTDGAQCYCPAGFRLAKFQNKCEDIDECQERESELCS 375
Query: 146 SGLDLVE-GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ G G++ D+R R + +G++ +L GM L G
Sbjct: 376 QSCENTSGGYRCSCDPGYLLAKDNRTCR--AANTHGSDHPLLLYTTQMNVMGMHL----G 429
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
+R + G ++ + DGS+ IYW N + + + + +
Sbjct: 430 SRNHVYQVAGNLSKVIGVAYDGSH--------IYWTNIQNEAESIVKANADGTHAEILLT 481
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDL 322
L+ ++ + + +Y+ D V I + D N +LV+ +++ LAL
Sbjct: 482 SGLDAPEDLAVDWLTQNIYFSDN----VMRHIAVCSHDALNCVVLVTEDVHQPRGLALWP 537
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+ G +FWTDWG P I R MDG + I+S I+WPNG+ LD+ +R+
Sbjct: 538 QRGQ-----------MFWTDWGVKPMIVRASMDGKRSTPIVSENIHWPNGIALDMHQQRI 586
Query: 383 YFADSKLDFIDFCNYDGTGRQQVI 406
Y+ D+KL + DGTGR+ V+
Sbjct: 587 YWVDAKLGSVQTVRPDGTGRRTVL 610
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 48/267 (17%), Positives = 106/267 (39%), Gaps = 16/267 (5%)
Query: 27 GCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQ-----PGYCS 81
C A+C H L P G C CP G L+ D C + ++ +
Sbjct: 674 ACATAKCSHLCLLAE----PEVGGRSCACPDGMQLAPDQQRCMQTVKRQRLFVGVGQFLL 729
Query: 82 QMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQ 141
++ G ++ S + + ++N LII++ ++A+ + R +
Sbjct: 730 EIEHTAFGRHVVSASHALDIIISEMVYNSVN---GTLIIADNERRMIAEYQPGLGQGRLR 786
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA-KDNITQPRGMMLD 200
++ S L V LA+D + ++YW D+ +E+ + +R ++ P G+ +
Sbjct: 787 TLIHSNLGNVSALAFDHLSQNLYWSDAERRVVELYSFHTRHRALIRFFAGQESPIGLSVM 846
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL--DIATRRVYFADSK 258
P+ G ++ + I+R+ + G T + + + + + D +Y++DS
Sbjct: 847 PAEGYLYVALKAR-RHTHIDRLPLSGKGSPTHVFEEELGDDDIKMATDHDQHTLYWSDSD 905
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWI 285
+ I ++ + + R+ Y +
Sbjct: 906 MGMISYTDYRQTQSMTFRSKLRRPYSL 932
>gi|345326425|ref|XP_001510419.2| PREDICTED: low-density lipoprotein receptor [Ornithorhynchus
anatinus]
Length = 872
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/301 (35%), Positives = 155/301 (51%), Gaps = 46/301 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 292 ECITQDKVCNAHRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKIGYECLCPDGFQLV 351
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC+ P CSQ+C N +GSY C CNEGY ++ TCKAI + A+L +N
Sbjct: 352 -DQKRCEDIDECQIPETCSQICRNLEGSYKCECNEGYEIDPITKTCKAIG-TIAYLFFTN 409
Query: 123 RHSI------------LVADLE---------------------------EKGKDHRAQDI 143
RH + L+ +L+ E K H
Sbjct: 410 RHEVRKMTLDRSEYTSLITNLKNVVALDVEIASNKIYWSDLAQNKIYSTEIDKAHNLTHD 469
Query: 144 VVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
V G D+ +G+A DWI G+IYW DS I V D G+ R L K + +PR +++DP
Sbjct: 470 TVIGEDIQAPDGIAVDWIHGNIYWTDSVPGTISVADTKGSKRKTLFKQELAKPRAIVVDP 529
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++WTDWG +IE+ G++G + +++ +I WPNGLTLD++ R+Y+ DSKL
Sbjct: 530 MQG--FMYWTDWGTPAKIEKGGLNGVDSFPLVTEEIQWPNGLTLDLSNGRLYWVDSKLHS 587
Query: 262 I 262
I
Sbjct: 588 I 588
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 170/425 (40%), Gaps = 97/425 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC--KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV+ ++ CD + DC + +DE ++ C +KF C GE ++
Sbjct: 252 CVHGSRQCDKEYDCKDMSDEIGCANVTLCDGPNKF----------------KCHSGECIT 295
Query: 63 NDSVT-----CQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH 106
D V C+D NEC + G CS +C + K Y C C +G+ L D
Sbjct: 296 QDKVCNAHRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKIGYECLCPDGFQL-VDQK 354
Query: 107 TCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
C+ I+ S L + + + D + + +AY +++
Sbjct: 355 RCEDIDECQIPETCSQICRNLEGSYKCECNEGYEIDPITKTCKAIGTIAY------LFFT 408
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226
+ R D + ++ N+ + LD + ++W+D +N +I +D
Sbjct: 409 NRHEVRKMTLDRSEYTSLITNLKNV-----VALDVEIASNKIYWSDLAQN-KIYSTEIDK 462
Query: 227 SN---RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLY 283
++ T+I I P+G+ +D I +Y
Sbjct: 463 AHNLTHDTVIGEDIQAPDGIAVDW------------------------------IHGNIY 492
Query: 284 WIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWT 341
W D VP I A+ GS L +L + A+ +D G +Y WT
Sbjct: 493 WTD----SVPGTISVADTKGSKRKTLFKQELAKPRAIVVDPMQGFMY-----------WT 537
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
DWG +IE+ G++G + +++ +I WPNGLTLD++ R+Y+ DSKL I + +G
Sbjct: 538 DWGTPAKIEKGGLNGVDSFPLVTEEIQWPNGLTLDLSNGRLYWVDSKLHSISSVDVNGGN 597
Query: 402 RQQVI 406
R+ V+
Sbjct: 598 RKTVL 602
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLAKDNITQPRGMMLD 200
+V + GL D G +YW+DS+L+ I D NG NR ++ ++ + P + +
Sbjct: 558 LVTEEIQWPNGLTLDLSNGRLYWVDSKLHSISSVDVNGGNRKTVLENQNKLAHPFSLAVF 617
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
+FWTD GS+ + +++ + P G+ L
Sbjct: 618 EDK----VFWTDIMNEAIFSANRFTGSDIN-VVAENLISPEGIIL 657
>gi|301615896|ref|XP_002937402.1| PREDICTED: low-density lipoprotein receptor-related protein 1B-like
[Xenopus (Silurana) tropicalis]
Length = 3233
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 185/420 (44%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+G+ DCP+G+DEG CD EC G CS+ C P G +C+CP G L
Sbjct: 1185 CLQPEKLCNGRRDCPDGSDEGDICD--ECSLNNGGCSHQCIIAPGRGIVCSCPQGMHLGT 1242
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C + CSQ+C K CSC EG+VL D TC +++ AF+I S R
Sbjct: 1243 DNKTCEQVDYCTKHTKCSQVCEQHKQVVKCSCYEGWVLNTDGETCSSVDTFEAFIIFSIR 1302
Query: 124 HSILVADLEEKGKD--------------HRAQDIV--------------------VSGLD 149
H I DL + H Q ++ VSG++
Sbjct: 1303 HEIRRIDLHRRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDKIYRGKLSETSGVSGIE 1362
Query: 150 LV--------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V EGLA DWI G+IYW+DS L++IEV +G R L + PR + LDP
Sbjct: 1363 VVIQHGLATPEGLAIDWIAGNIYWIDSNLDQIEVAKLDGKMRSTLIAGGMEHPRAIALDP 1422
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW PRIE M G+ R I WPNGLT+D RR+ + D++
Sbjct: 1423 RYGI--LFWTDWDATFPRIESASMSGAGRKIIYKDMESGAWPNGLTVDHFERRILWTDAR 1480
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG+ ++ G Y +
Sbjct: 1481 SDAI------------YSALY----------------------DGTAMKEIIRGHEYLSH 1506
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 1507 PFAVS---LYGSD------VYWTDWRTNTLSKANKWTGHNVSVIQKTSAQPFDIEIYHPS 1557
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 149/308 (48%), Gaps = 51/308 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C++ +K+C+G DC +G DEG C + + C C G C C G D
Sbjct: 125 CIHYSKLCNGVYDCTDGYDEGAHCRELQTTCQKRNCQYKCAIMRNGTECYCRDGYETGPD 184
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLIIS 121
TC+D++EC G CSQ C NT GSY CSC EGY+++ DN +CKA N A L+I+
Sbjct: 185 GRTCKDIDECAAYGSCSQTCRNTLGSYTCSCIEGYLIQSDNKSCKAKNEPADRPPVLLIA 244
Query: 122 NRHSILVADLEEKGKDHRAQ---------------------------------DIVVSG- 147
N +I V D+ R+ I +G
Sbjct: 245 NSETIEVLDINGGKAPTRSSMNANGIHTLGFIYDENKVCWIETKKPTNQLKCYKITKTGT 304
Query: 148 ------------LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
L+ V +A DW+ G+ Y++D +RI VC+ NGT I L ++ P+
Sbjct: 305 FTDERIIQLSQFLNNVHQMAVDWLTGNYYFVDDGNDRIFVCNHNGTVCITLIDLDLHNPK 364
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D + G LF+TD+G ++ER +DG NR+ I+ +KI P LTLD+ + VY+A
Sbjct: 365 AIAVDATAGK--LFFTDYGTVAKVERCDLDGMNRTRIVVSKIEQPTALTLDLVNKFVYWA 422
Query: 256 DSKLDFID 263
D LD+I+
Sbjct: 423 DVYLDYIE 430
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 139/270 (51%), Gaps = 38/270 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+CV +CD + DC +G+DE GC + EC + CS C P+G C C PG L
Sbjct: 2861 KCVPKGALCDTRDDCGDGSDE-RGCHVNECLSKRVSGCSQDCQDLPVGYKCKCWPGFRLK 2919
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVL--EYDNHTCKAINHSAAFLII 120
ND TC D++EC CSQ C NT G+Y C C +GY + EY N CK+++ FL++
Sbjct: 2920 NDGKTCVDIDECLSGFPCSQQCINTYGTYKCLCADGYQIHPEYPN-GCKSLSEEDPFLLL 2978
Query: 121 SNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD------SRLNRIE 174
++ H I + D ++ GL+ V + +D+ IYW+D SR+NR+
Sbjct: 2979 ADHHEI-----RKMSTDGLNYTMLKQGLNNVIAMDFDYREEVIYWIDSSRSNGSRVNRMF 3033
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V NG+ D R+L+W D E P + R+GMDG+N+S +I
Sbjct: 3034 V---NGS------------------DVKHTYRYLYWIDCCEYPHVGRVGMDGTNQSVVIE 3072
Query: 235 TKIYWPNGLTLDIATRRVYFA-DSKLDFID 263
T I P LT+D +R+Y+A ++ ++F D
Sbjct: 3073 TMISRPMALTIDYVNKRIYWANENHIEFSD 3102
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 138/299 (46%), Gaps = 61/299 (20%)
Query: 69 QDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
Q N C+ G CSQ+C T + + C C GY L+ + +C+ I +FL+ S I
Sbjct: 1792 QGSNPCQINNGGCSQLCLPTSETTRTCMCTVGYNLKKNRMSCQGIE---SFLMYSVHEGI 1848
Query: 127 LVADLEEK----------------GKDHRA-------------------------QDIVV 145
L+ G D A +DI+
Sbjct: 1849 RGIPLDPSDRMDALMPISGTSFAVGIDFHAGNDSIYWTDMGLNRISRSRRDQTWKEDIMT 1908
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL VEG+A DWI G+IYW D N IEV NG+ R V+ I QPR + + P G
Sbjct: 1909 NGLGRVEGIAIDWIAGNIYWADHGFNVIEVARLNGSFRFVVLSRGIDQPRAIAVHPEKG- 1967
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+LFWT+WG+ P I R +DGS R+ +++T I WPNG+++D ++Y+ D++ D I+
Sbjct: 1968 -YLFWTEWGQTPCISRARLDGSERTVLVNTAISWPNGISVDYEENKLYWCDARTDKIERI 2026
Query: 266 SLE---------IKTNVNYSTIF---RKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
LE +NV+ ++ +YW D + ++ N D ++A + +G
Sbjct: 2027 DLESGRNREIVLSGSNVDMFSVVVFGAYIYWSDRAHSNGSIRRAHKN-DATDAVTMRTG 2084
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 116/230 (50%), Gaps = 29/230 (12%)
Query: 53 CTCPPGEILSNDSVTCQD-MNEC------EQPGYCSQMCTNTKGSYICSCNEGYVLEYDN 105
C C G L++D +C+ NE +PG M N+K S + Y+L +N
Sbjct: 536 CRCKTGFSLASDGRSCKKPKNELFLIYGKGRPGIIRAMDLNSKVS------DEYMLPIEN 589
Query: 106 HT-CKAINHSAA--FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGH 162
+A+++ A ++ ++ S L+ + G + I+ LD VEG+A DWI +
Sbjct: 590 LVNPRALDYHAETNYIYFADTTSFLIGRQKIDGSGR--ETILKDDLDNVEGIAVDWISNN 647
Query: 163 IYWL-DSRLNRIEVC--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP-- 217
+YW D I V ++ +R L + ++ PRG+++DP G W++WTDW E+
Sbjct: 648 LYWTNDGHRKTINVARLEKASQSRKTLLEGEMSHPRGIVMDPVNG--WMYWTDWEEDEID 705
Query: 218 ----RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
RIE+ MDGS R +++ + WPNGL+LD +Y+ D+ D I+
Sbjct: 706 DSVGRIEKAWMDGSERQIFVTSNMLWPNGLSLDHENSILYWCDAFYDHIE 755
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 171/425 (40%), Gaps = 84/425 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV+ + +CDG+ DCP+ +DE +TCH + CP +
Sbjct: 80 CVSQSWLCDGEPDCPDNSDES---------------VDTCHEK---IVFKCPRNHVACTG 121
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICS--CNEGYVLEYDNHTCKAINHSAAFLIISN 122
+ C + S++C G Y C+ +EG TC+ N I+ N
Sbjct: 122 TKNCI---------HYSKLCN---GVYDCTDGYDEGAHCRELQTTCQKRNCQYKCAIMRN 169
Query: 123 RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAY--------DWIGGHIYWLDSRLNRIE 174
D E G D R + D+ E AY + +G + + IE
Sbjct: 170 GTECYCRDGYETGPDGR------TCKDIDECAAYGSCSQTCRNTLGSYT------CSCIE 217
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII- 233
N+ AK+ ++L + T + + G+ P + +G + I
Sbjct: 218 GYLIQSDNKSCKAKNEPADRPPVLLIANSETIEVLDINGGKAPTRSSMNANGIHTLGFIY 277
Query: 234 -STKIYW------PNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI---FRKLY 283
K+ W N L T+ F D ++ + + NV+ + Y
Sbjct: 278 DENKVCWIETKKPTNQLKCYKITKTGTFTDERIIQLS----QFLNNVHQMAVDWLTGNYY 333
Query: 284 WIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTRWLFWT 341
++D+G + +I N +G+ L+ L+ +A+A+D G L F+T
Sbjct: 334 FVDDGND----RIFVCNHNGTVCITLIDLDLHNPKAIAVDATAGKL-----------FFT 378
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G ++ER +DG NR+ I+ +KI P LTLD+ + VY+AD LD+I+ +Y+G
Sbjct: 379 DYGTVAKVERCDLDGMNRTRIVVSKIEQPTALTLDLVNKFVYWADVYLDYIEVVDYEGRN 438
Query: 402 RQQVI 406
RQ +I
Sbjct: 439 RQSII 443
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 176/435 (40%), Gaps = 82/435 (18%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS--NRHSILVADLEEK 134
G CS +C N + C+C L D TC I HS L + +R+ ++ ++
Sbjct: 1573 GPCSHLCLINFNRTAACACPHLMKLSSDKKTCYDI-HSIRGLAVDWLSRNLYWISSEYDE 1631
Query: 135 GK------DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK 188
+ D + V+ G+D + LA I G I+W+D N I + + +G+N +L +
Sbjct: 1632 TQINVARMDGSLKTSVIHGIDKAQSLAVHPIRGKIFWMDG--NSINMANMDGSNSKILFQ 1689
Query: 189 DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248
N +P G+ +D G L+W G N I R +DGSN I S K L I
Sbjct: 1690 -NQKEPIGLSID--YGDNKLYWISSG-NATINRCSLDGSNLEVIESMKSELSKPTALTIV 1745
Query: 249 TRRVYFADSKLDFI------DCKSLEIKTNVNYSTIFRKLY-----------WIDEGGN- 290
++++AD L I D ++ + N + KLY I+ GG
Sbjct: 1746 DNKLWWADQNLGQIGTCNKRDGRNPSVMRNKTLGVMHMKLYDKEAQQGSNPCQINNGGCS 1805
Query: 291 -----------------GVPLKIGKANMDGSNASILVS-GQLYEALALDLENGMLYYSTL 332
G LK + + G + ++ S + + LD + M +
Sbjct: 1806 QLCLPTSETTRTCMCTVGYNLKKNRMSCQGIESFLMYSVHEGIRGIPLDPSDRMDALMPI 1865
Query: 333 KCTRW------------LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
T + ++WTD G N RI R D + + I++ + G+ +D
Sbjct: 1866 SGTSFAVGIDFHAGNDSIYWTDMGLN-RISRSRRDQTWKEDIMTNGLGRVEGIAIDWIAG 1924
Query: 381 RVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYST 440
+Y+AD + I+ +G+ R V+ G + A+A+ E G L+++
Sbjct: 1925 NIYWADHGFNVIEVARLNGSFRFVVL-----------SRGIDQPRAIAVHPEKGYLFWT- 1972
Query: 441 EGAEFLKTPLFCITR 455
E+ +TP CI+R
Sbjct: 1973 ---EWGQTP--CISR 1982
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 130/346 (37%), Gaps = 99/346 (28%)
Query: 70 DMNECEQPGYCSQMCT--NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL 127
+MN PG C +C ++ C C G+ L D +CK + + R I+
Sbjct: 511 EMNPDGMPGGCDHICLLGSSFKMRTCRCKTGFSLASDGRSCKKPKNELFLIYGKGRPGII 570
Query: 128 VADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
RA D L+S++ ++ +L
Sbjct: 571 -----------RAMD-----------------------LNSKV----------SDEYMLP 586
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+N+ PR LD T ++++ D + I R +DGS R TI+ + G+ +D
Sbjct: 587 IENLVNPRA--LDYHAETNYIYFAD-TTSFLIGRQKIDGSGRETILKDDLDNVEGIAVDW 643
Query: 248 ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307
I LYW ++G + + + +
Sbjct: 644 ------------------------------ISNNLYWTNDGHRKT-INVARLEKASQSRK 672
Query: 308 ILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENP------RIERIGMDGSNR 359
L+ G++ + +D NG W++WTDW E+ RIE+ MDGS R
Sbjct: 673 TLLEGEMSHPRGIVMDPVNG-----------WMYWTDWEEDEIDDSVGRIEKAWMDGSER 721
Query: 360 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+++ + WPNGL+LD +Y+ D+ D I+ +GT R+ V
Sbjct: 722 QIFVTSNMLWPNGLSLDHENSILYWCDAFYDHIEQIYLNGTLRKVV 767
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G N I+ST I PNGLT+D ++Y++D L
Sbjct: 2286 ECQNLMFWTNWNEQHPSIMRSTLSGQNAQVIVSTDIVTPNGLTIDHPAEKLYYSDGSLGK 2345
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 2346 IERCEYDGSHRHVIV 2360
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 24/138 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLE--NGMLYY------------------STLKC 334
+I K + DG N ++L G L +A+D + ++Y+ S +K
Sbjct: 2983 EIRKMSTDGLNYTMLKQG-LNNVIAMDFDYREEVIYWIDSSRSNGSRVNRMFVNGSDVKH 3041
Query: 335 T-RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
T R+L+W D E P + R+GMDG+N+S +I T I P LT+D +R+Y+A+ + I+
Sbjct: 3042 TYRYLYWIDCCEYPHVGRVGMDGTNQSVVIETMISRPMALTIDYVNKRIYWANE--NHIE 3099
Query: 394 FCNYDGTGRQQVILIDLM 411
F + +G+ R +V D+
Sbjct: 3100 FSDMNGSNRHKVPYQDVQ 3117
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 93/246 (37%), Gaps = 58/246 (23%)
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-----NRIEVCDENGTNR---IVLAK 188
D + +++ + VEGLAY +YW S + ++ NR I +++
Sbjct: 2216 DWTGRKVIIENVGSVEGLAYHRAWDTLYWTSSTTSSITRHTVDQSRRGAFNREAVITMSE 2275
Query: 189 DNITQPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
D+ P + LD +FWT+W E +P I R + G N I+ST I PNGLT+D
Sbjct: 2276 DD--HPHVLALDECQNL--MFWTNWNEQHPSIMRSTLSGQNAQVIVSTDIVTPNGLTIDH 2331
Query: 248 ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307
++Y++D L KI + DGS+
Sbjct: 2332 PAEKLYYSDGSLG----------------------------------KIERCEYDGSHRH 2357
Query: 308 ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 367
++V +L + N ++FW+DW + G + S
Sbjct: 2358 VIVRSGPGTFFSLAIHND-----------YIFWSDWVRRAILRSNKYTGGETKVLRSDIP 2406
Query: 368 YWPNGL 373
+ P G+
Sbjct: 2407 HQPMGI 2412
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 72/195 (36%), Gaps = 33/195 (16%)
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
++ I ++ DG N T++ + + D +Y+ DS +
Sbjct: 2979 ADHHEIRKMSTDGLNY-TMLKQGLNNVIAMDFDYREEVIYWIDSSRSNGSRVNRMFVNGS 3037
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL--DLENGMLYYST 331
+ +R LYWID P +G+ MDG+N S+++ + +AL D N +Y
Sbjct: 3038 DVKHTYRYLYWID--CCEYP-HVGRVGMDGTNQSVVIETMISRPMALTIDYVNKRIY--- 3091
Query: 332 LKCTRWLFWTDWGENPRIERIGMDGSNRS-------------TIISTKIYWPNGLTLDIA 378
W IE M+GSNR T+ IYW +G T +
Sbjct: 3092 -----------WANENHIEFSDMNGSNRHKVPYQDVQGVIALTLFEDYIYWTDGKTKSLN 3140
Query: 379 TRRVYFADSKLDFID 393
++K I+
Sbjct: 3141 RAHKTSGENKASLIN 3155
>gi|332020904|gb|EGI61302.1| Very low-density lipoprotein receptor [Acromyrmex echinatior]
Length = 902
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/299 (36%), Positives = 148/299 (49%), Gaps = 45/299 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L VC+ DC DE C + EC G CS C P+G C C G L
Sbjct: 349 CIPLENVCNKNPDCIGWEDESAELCGVNECAKNNGGCSQICVDLPIGYRCDCRTGYRLI- 407
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D+ TC D++EC +PG CSQ C N KG + CSC GY+ + N T CKA A+ L+ +
Sbjct: 408 DNRTCDDIDECLEPGSCSQFCHNEKGGFKCSCATGYLKDPRNLTRCKAAEGHAS-LLFAR 466
Query: 123 RHSILVADLEEKGKDHRAQDI-VVSGLDLV------------------------------ 151
RH I L+ + + + + LD V
Sbjct: 467 RHDIRKVALDRQEMTAIVNNTKMATALDFVFRTGMIFWSDISEKKIYKAPIDEGNERTVV 526
Query: 152 --------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+GLA DWI HIYW DS + IE+ + G R L +D I +PR + L+P
Sbjct: 527 IENDFTTSDGLAVDWIYSHIYWTDSGKDTIELANFEGNMRKTLIRDRIQEPRAIALNPLE 586
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G W+FWTDW + RIER GMDG++RS I+ + WPNGL LD+ +RVY+ D+KL+ I
Sbjct: 587 G--WMFWTDWSDEARIERAGMDGTHRSVIVGNDVKWPNGLALDLIGKRVYWVDAKLNII 643
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Query: 129 ADLEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IV 185
A +E G D + ++V + GLA D IG +YW+D++LN I C+ +GT R ++
Sbjct: 598 ARIERAGMDGTHRSVIVGNDVKWPNGLALDLIGKRVYWVDAKLNIIGSCNYDGTGRRTVL 657
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 236
+ +++ P + + +++WTDW + + G + S +
Sbjct: 658 YSPESLRHPFSI----TTFEDYVYWTDWDKETIFKANKFTGKEVEAVTSIR 704
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 296 IGKANMDGSNASILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
I K +D + +V+ ++ AL GM+ FW+D E +I + +
Sbjct: 470 IRKVALDRQEMTAIVNNTKMATALDFVFRTGMI-----------FWSDISEK-KIYKAPI 517
Query: 355 D-GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
D G+ R+ +I +GL +D +Y+ DS D I+ N++G R+ +I
Sbjct: 518 DEGNERTVVIENDFTTSDGLAVDWIYSHIYWTDSGKDTIELANFEGNMRKTLI 570
>gi|301760452|ref|XP_002916019.1| PREDICTED: low-density lipoprotein receptor-related protein 1B-like
[Ailuropoda melanoleuca]
Length = 4636
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 183/420 (43%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+G+ DCP+G+DEG CD EC G CSN C P G +C+CP G L+
Sbjct: 1187 CLQPEKLCNGRRDCPDGSDEGDLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPQGLQLNK 1244
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC EG+ L+ D +C +++ AF+I S R
Sbjct: 1245 DNKTCEIIDYCSNHLKCSQVCEQHKHTVKCSCYEGWKLDVDGESCTSVDPFEAFIIFSIR 1304
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1305 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAVE 1364
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 1365 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDP 1424
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 1425 RYGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAR 1482
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG+ ++ G Y +
Sbjct: 1483 SDAI------------YSALY----------------------DGTAMIEIIRGHEYLSH 1508
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 1509 PFAVS---LYGSE------VYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYHPS 1559
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 144/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +CD K DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 2939 RCIPSGGLCDNKDDCGDGSDE-RNCHINECLSKKVSGCSQDCQDLPVSYKCKCWPGFQLK 2997
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C +GY ++ DN + CK+++ FLI++
Sbjct: 2998 DDGKTCVDIDECSLGFPCSQQCINTYGTYKCLCTDGYEIQPDNPNGCKSLSDEEPFLILA 3057
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
+ H I L ++G D+R + I
Sbjct: 3058 DHHEIRKISTDGSNYTLLKQGLNNVIGIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDI 3117
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG +L + PR + LDP
Sbjct: 3118 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTILVSKRLKFPRDLSLDPR 3177
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +L+W D E P I R+GMDG+N+S +I TKI P LT+D +R+Y+AD
Sbjct: 3178 AG--YLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNQRLYWAD 3229
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 153/318 (48%), Gaps = 65/318 (20%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEG-------PGCDLAECKHKFGLCSNTCHPTPLGALCT 54
A++C++L+++C+G DC +G DEG P C C++K + N+ C
Sbjct: 124 ANKCIHLSQLCNGVLDCSDGYDEGLHCQELLPNCQQLNCQYKCAMVRNS-------TRCY 176
Query: 55 CPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHS 114
C G + D +C+D +EC G CSQ C N+ GSY CSC EGY+++ DN +CKA N
Sbjct: 177 CEDGFEVKEDGRSCRDQDECAIYGACSQTCINSYGSYACSCVEGYIMQPDNRSCKAKNEP 236
Query: 115 A---AFLIISNRHSI-------------------------------LVADLEEKGKDHRA 140
L+I+N +I ++ +E + ++
Sbjct: 237 TDRLPMLLIANSETIEVFYLNGSKMATLSSVNGNEIHTLDFIYNEDMICWIESRESSNQL 296
Query: 141 QDI---------------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
+ I ++ V+ +A DW+ ++Y++D +RI VC+ NG+ +
Sbjct: 297 KCIQITKTGRLTDEWAINILQSFHNVQQMAIDWLTRNLYFVDHVSDRIFVCNYNGSVCVT 356
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
L + P+ + +DP G LF+TD+G ++ER MDG NR+ II +K P L L
Sbjct: 357 LIDLELHNPKAIAVDPIAGK--LFFTDYGNVAKVERCDMDGLNRTRIIDSKTEQPAALAL 414
Query: 246 DIATRRVYFADSKLDFID 263
D+ + VY+ D LD+++
Sbjct: 415 DLVNKLVYWVDLYLDYVE 432
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 126/287 (43%), Gaps = 60/287 (20%)
Query: 69 QDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
Q N C+ G CSQ+C T + + C C GY L+ + +C+ I +FL+ S I
Sbjct: 1870 QGNNSCQLNNGGCSQLCLPTSETTRTCMCTVGYYLQKNRMSCQGIE---SFLMYSVHEGI 1926
Query: 127 LVADLEEKGK----------------DHRAQ-------------------------DIVV 145
LE K D A+ DI+
Sbjct: 1927 RGIPLEPSDKMDALMPISGTSFAVGIDFHAENDTIYWTDMGFNKISRAKRDQTWKEDIIT 1986
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + + P G
Sbjct: 1987 NGLGRVEGIAIDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIAVHPEKG- 2045
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+LFWT+WG+ P I + +DGS + ++S I WPNG+++D ++Y+ D++ D I+
Sbjct: 2046 -YLFWTEWGQMPCIGKARLDGSEKVILVSMGIAWPNGISIDYEEHKLYWCDARTDKIERI 2104
Query: 266 SLEIKTN------------VNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
LE N + + +YW D ++ G N
Sbjct: 2105 DLETGGNREMVLSGSNVDMFSVAVFGAYIYWSDRAHANGSIRRGHKN 2151
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 107/240 (44%), Gaps = 55/240 (22%)
Query: 77 PGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA-DLEE 133
PG CS +C +++ + C C G+ L D +CK + R I+ DL
Sbjct: 520 PGGCSHICLLSSSYKTRTCRCRTGFNLGSDGRSCKRPKNELFLFYGKGRPGIVRGMDLNT 579
Query: 134 KGKDH-----------RAQD------------------------------IVVSGLDLVE 152
K D RA D I+ LD VE
Sbjct: 580 KIADEYMIPIENLVNPRALDFHAETNYIYFADTTSFLIGRQKIDGTERETILKDDLDNVE 639
Query: 153 GLAYDWIGGHIYWL-DSRLNRIEVC--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
G+A DWIG ++YW D I V ++ +R L + ++ PRG+++DP G W++
Sbjct: 640 GIAVDWIGNNLYWTNDGHRKTINVARLEKASQSRKTLLEGEMSHPRGIVVDPVNG--WMY 697
Query: 210 WTDWGENP------RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
WTDW E+ RIE+ MDG NR +++K+ WPNGLTLD T +Y+ D+ D I+
Sbjct: 698 WTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTNTLYWCDAYYDHIE 757
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 137/328 (41%), Gaps = 74/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSNT--CHPTPLGALCTCPP 57
+C+ + CD DC +G+DE GC + C+ C + C+ C C P
Sbjct: 3810 KCIPMDLQCDQFDDCGDGSDE-QGCRITSAEYTCEDNVNPCGDDAYCNQIKTSVFCRCKP 3868
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G + + C+D+NEC G CS C N +GSY C C++ + + N+TC A
Sbjct: 3869 GFQRNMKNRQCEDLNECLVFGTCSHQCINIEGSYKCVCDQNF--QERNNTCIAKGSEDQV 3926
Query: 118 LIISNRHSIL--------------VADLEEKGK-----DHRAQDIVV------------- 145
L I+N IL ++ +E + + +D+++
Sbjct: 3927 LYIANDTDILGFIYPFNYSGDHQQISHIEHNSRITGMDVYYQRDMIIWSTQFNPGGIFYK 3986
Query: 146 -----------SGLDLVE-----GLAYDWIGGHIYWLD-SRLN--------------RIE 174
SGL E +A DW+ G+IYW D SR++ I
Sbjct: 3987 MIHGREKRQANSGLICPEFKRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSIN 4046
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V NG N L + +P + ++P G ++WT G++ IE MDG+ R ++
Sbjct: 4047 VGQLNGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVIGDHSHIEEAAMDGTLRRILVQ 4104
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D + R+Y+AD +L I
Sbjct: 4105 KNLQRPTGLAVDHFSERIYWADLELSVI 4132
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 17/131 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCT 335
+ R LY++D V +I N +GS L+ +L+ +A+A+D G L
Sbjct: 330 LTRNLYFVDH----VSDRIFVCNYNGSVCVTLIDLELHNPKAIAVDPIAGKL-------- 377
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
F+TD+G ++ER MDG NR+ II +K P L LD+ + VY+ D LD+++
Sbjct: 378 ---FFTDYGNVAKVERCDMDGLNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVEVV 434
Query: 396 NYDGTGRQQVI 406
+Y G R +I
Sbjct: 435 DYQGKNRHTII 445
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G N ++ST I PNGLT+D ++YF+D L
Sbjct: 2364 ECQNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDHRAEKLYFSDGSLGK 2423
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 2424 IERCEYDGSQRHVIV 2438
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 138/310 (44%), Gaps = 39/310 (12%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS MC N S C+C L D TC + FL+ + R I D++
Sbjct: 1575 GPCSHMCLINHNRSAACACPHLMKLSSDKKTCYEMK---KFLLYARRSEIRGVDIDNPYF 1631
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ V +D V + +D +YW D + I+ NGT + +I RG
Sbjct: 1632 NFITA-FTVPDIDDVTVIDFDASEERLYWTDIKTQTIKRAFINGTGLETVISRDIQSIRG 1690
Query: 197 MMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIIS--------------TKIYWPN 241
+ +D +R L+W + + +I +DGS +++II K+YW +
Sbjct: 1691 LAVDWV--SRNLYWVSSEFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD 1748
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
G T+++A + ++SK+ F + K + +++Y + KLYWI GNG I + N+
Sbjct: 1749 GNTINMAN--MDGSNSKILFQNQKE-PVGLSIDY--VENKLYWI-SSGNGT---INRCNL 1799
Query: 302 DGSNASILVS--GQLYEALALDLENGMLYYSTLKCTRWLFWTDW-GENPRIERIGMDGSN 358
DG N ++ S +L +A AL + + L+++ + + G NP + R +
Sbjct: 1800 DGGNLEVIESMKEELTKATALTIMDKKLWWADQNLAQLGTCSKRDGRNPTVLR-----NK 1854
Query: 359 RSTIISTKIY 368
S ++ K+Y
Sbjct: 1855 TSGVVHMKVY 1864
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 158/425 (37%), Gaps = 79/425 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGP-GCDLA----ECKHKFGLCSNT-CHPTPLGA--LCTCP 56
C+ ++C+G DC + +DE G L CK CSN C P L C
Sbjct: 3766 CLQPEQMCNGIDDCGDNSDEDHCGGKLTYKARPCKKDEFACSNKKCIPMDLQCDQFDDCG 3825
Query: 57 PGE-----ILSNDSVTCQD-MNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110
G +++ TC+D +N C YC+Q+ K S C C G+ N C+
Sbjct: 3826 DGSDEQGCRITSAEYTCEDNVNPCGDDAYCNQI----KTSVFCRCKPGFQRNMKNRQCED 3881
Query: 111 INHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL 170
+N F S+ Q I + G +Y + +
Sbjct: 3882 LNECLVFGTCSH------------------QCINIEG-------SYKCVCDQNF-----Q 3911
Query: 171 NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS-NR 229
R C G+ VL N T G + + + N RI GMD R
Sbjct: 3912 ERNNTCIAKGSEDQVLYIANDTDILGFIYPFNYSGDHQQISHIEHNSRI--TGMDVYYQR 3969
Query: 230 STIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
II + + P G+ I R A+S L C + ++ + +YW D
Sbjct: 3970 DMIIWSTQFNPGGIFYKMIHGREKRQANSGLI---CPEFKRPRDIAVDWVAGNIYWTDHS 4026
Query: 289 G-----------NGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ I ++G N + L++ E A+A++ + GM+Y
Sbjct: 4027 RMHWFSYYTTHWTSLRYSINVGQLNGPNCTRLLTNMAGEPYAIAVNPKRGMMY------- 4079
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WT G++ IE MDG+ R ++ + P GL +D + R+Y+AD +L I
Sbjct: 4080 ----WTVIGDHSHIEEAAMDGTLRRILVQKNLQRPTGLAVDHFSERIYWADLELSVIGSV 4135
Query: 396 NYDGT 400
YDG+
Sbjct: 4136 LYDGS 4140
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 95/224 (42%), Gaps = 33/224 (14%)
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++D L+WTD + I+R ++G+ T+IS I GL +D +R +Y+ S
Sbjct: 1647 VIDFDASEERLYWTDI-KTQTIKRAFINGTGLETVISRDIQSIRGLAVDWVSRNLYWVSS 1705
Query: 258 KLDFIDCKSLEIKTNVNYSTIFR--------------KLYWIDEGGNGVPLKIGKANMDG 303
+ D + ++ S I KLYW D GN I ANMDG
Sbjct: 1706 EFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD--GN----TINMANMDG 1759
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
SN+ IL Q E + L ++ Y K L+W G N I R +DG N I
Sbjct: 1760 SNSKILFQNQ-KEPVGLSID-----YVENK----LYWISSG-NGTINRCNLDGGNLEVIE 1808
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
S K L I +++++AD L + C+ GR +L
Sbjct: 1809 SMKEELTKATALTIMDKKLWWADQNLAQLGTCS-KRDGRNPTVL 1851
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 91/240 (37%), Gaps = 54/240 (22%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-----NRIEVCDENGTNR-IVLAKDNITQP 194
+ ++V + VEGLAY +YW S + ++ +R V+A P
Sbjct: 2298 RQVIVENVGSVEGLAYHRAWDTLYWTSSTTSSITRHTVDQTRPGAFDREAVIAMSEDDHP 2357
Query: 195 RGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
+ LD +FWT+W E +P I R + G N ++ST I PNGLT+D ++Y
Sbjct: 2358 HVLALDEC--QNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDHRAEKLY 2415
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
F+D L KI + DGS ++V
Sbjct: 2416 FSDGSLG----------------------------------KIERCEYDGSQRHVIVKSG 2441
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
L+L + + ++FW+DWG + G + + S + P G+
Sbjct: 2442 PGTFLSLAVYDN-----------YIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGI 2490
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ +V + + GL D +Y+ D L +IE C+ +G+ R V+ K G L
Sbjct: 2391 AQVVVSTDILTPNGLTIDHRAEKLYFSDGSLGKIERCEYDGSQRHVIVKSG----PGTFL 2446
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ ++FW+DWG + G + + S + P G+
Sbjct: 2447 SLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGI 2490
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 26/157 (16%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD + +L L+WTD E+ RI R +
Sbjct: 1306 EIRRIDLHKRDYSLLVPG-LRNTIALDFH----FNQSL-----LYWTDVVED-RIYRGKL 1354
Query: 355 DGSNR----STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
S ++ + P GLT+D +Y+ DS LD I+ DG+ R LI
Sbjct: 1355 SESGGVSAVEVVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLR--TTLIAG 1412
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
+E A+ALD G+L+++ A F +
Sbjct: 1413 AMEHPR---------AIALDPRYGILFWTDWDANFPR 1440
>gi|427795113|gb|JAA63008.1| Putative prolow-density lipoprotein receptor-related protein 1,
partial [Rhipicephalus pulchellus]
Length = 3609
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 150/308 (48%), Gaps = 53/308 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
RC+ +T++CD DC +G+DEG CD C C + C PTP G C C G L+
Sbjct: 137 RCIEVTRLCDKVPDCKDGSDEGGLCDEGLCNPND--CEDFCRPTPYGKTCYCRDGLQLAI 194
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
+ +C D C Q G CSQ C K S+ C+C +GY L D TCK+ + + ++I SNR
Sbjct: 195 NGRSCTDKKPCSQWGVCSQKCFQLKHSHKCTCEKGYELASDMFTCKSTDPATPYVIFSNR 254
Query: 124 HSILVADLEEKG--------KDHRAQD--------------------------------- 142
H + DL K+ A D
Sbjct: 255 HELRSVDLNTMSLRALITGLKNTIALDFYHSDSGDMLYWTDVVDDKIYRGSIISGSLSSI 314
Query: 143 --IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+V +GL EGLA DWIG ++YW++S L++IEV NG+ R L N+ PR ++LD
Sbjct: 315 EVVVETGLATAEGLAVDWIGENLYWVESNLDQIEVAKLNGSFRRTLVAGNMESPRAIVLD 374
Query: 201 PSPGTRWLFWTDW-GENPRIERIGMDGSNRSTI-----ISTKIYWPNGLTLDIATRRVYF 254
P G +FWTDW E PRIE+ M G R + ++ WPNGLTLD R+Y+
Sbjct: 375 PRYG--LMFWTDWDKEAPRIEQASMSGDGRRVVLRIDEVTQGGAWPNGLTLDFVALRIYW 432
Query: 255 ADSKLDFI 262
D++ D +
Sbjct: 433 IDARSDSV 440
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 185/411 (45%), Gaps = 96/411 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVN + +C+G+ DC + +DE C++ EC+ CS C P+G C+C PG D
Sbjct: 1910 CVNDSLLCNGENDCGDFSDED-QCNVNECELSTHACSQLCEDRPIGYKCSCHPGFEPKYD 1968
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
C+D++EC C+ C NT GS+ C+C +GY TCKA + A L++SNR+
Sbjct: 1969 GRICEDVDECTTKYPCTHHCRNTYGSFACTCADGYFSIDAGRTCKANSSVRAHLLLSNRY 2028
Query: 125 SILVADLEEKGKDHRAQDI---VVSGLDLVE----------------------------- 152
I DL + + AQ++ V D VE
Sbjct: 2029 YIRQIDLHKISSEILAQNLTNSVALDFDSVEDCIYWSEVTAVGSSIKRMCLKGRQQHEVL 2088
Query: 153 ---------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
GLA DWIG ++YW D + IEV +G R VL + + +PR +++DP
Sbjct: 2089 HSTTVQNPDGLAVDWIGRNLYWCDKGKDTIEVSHLDGKFRKVLIRTGLEEPRAIVVDPVD 2148
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTII---STKIYWPNGLTLDIATRRVYFADSKLD 260
G +++WTDWGE+P I + MDGSN ++ S + WPN LTLD+ TR++++AD+K D
Sbjct: 2149 G--YMYWTDWGEHPYIGKAEMDGSNVQVLVNESSESMGWPNALTLDLITRQLFWADAKHD 2206
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV----SGQLYE 316
+ I AN+DG N IL + L+
Sbjct: 2207 Y----------------------------------IATANLDGGNIRILARNGPTSPLHH 2232
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 367
A+ L LY WTDW + + +N +T++ T I
Sbjct: 2233 VFAMTLFEDKLY-----------WTDWESKAVLYCNKNNCTNITTLVRTAI 2272
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 91/152 (59%), Gaps = 5/152 (3%)
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
+D ++ VVSGLD +EGLA DW+ G++YW+D + IEV NG+ R VL N+ +PR
Sbjct: 940 RDMTGRETVVSGLDAIEGLAIDWVAGNMYWIDPSYDVIEVSRLNGSGRYVLLSGNMDKPR 999
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+++ P G ++FW+DWG P+IER +DGSNR +++ + N L +D ++Y+
Sbjct: 1000 AIVVHPYKG--YIFWSDWGVPPKIERAALDGSNRIVLVNVSVQLVNDLAIDFEEDKLYWC 1057
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDE 287
DS+ D I+ +L+ T+F + +E
Sbjct: 1058 DSRTDTIERVNLD---GTGRETVFPPPFETEE 1086
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT-CPPGEILSN 63
CV + VCDGK DC + +DE D +C H C P C + N
Sbjct: 2709 CVQGSGVCDGKDDCGDNSDE----DTPQCHH--------CKPHEFRCKSQRCIASNLFCN 2756
Query: 64 DSVTCQDMNECE-------QPGYCSQMCTNTKGS-YICSCNEGYVLEYD-NHTCKAINHS 114
C D + E + G CS C K S + CSC G+V ++ N++C A
Sbjct: 2757 GVDDCGDGTDEEDCDTGPCRFGTCSHTCNIKKNSTHSCSCAHGFVKDHRRNNSCVAQGKK 2816
Query: 115 AAFLIISN---RH----------------------SILVADL------------------ 131
A L+ S RH I DL
Sbjct: 2817 AYLLVASENELRHVDPYKSSHQDGRGMLGNLDPSNRIHAVDLFYNDSQVLVFWASLHMGA 2876
Query: 132 -----------EEKGKDHR--AQDIVVSGLDLVE--GLAYDWIGGHIYWLDSRLNRIEVC 176
E G+ R A D V +L E GLA DW+G +YW+D+ + I V
Sbjct: 2877 IYRRRLPSLPQTENGRRKRQAASDAAVLLGNLTEPRGLAVDWVGQMLYWVDAGEHSISVA 2936
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 236
+G R L +N+ QP + +DP G +LFWT+ G PRI R +DGSN T++ +
Sbjct: 2937 SLDGRLRRTLISENLDQPSDIAVDPHSG--YLFWTETGSKPRIGRANLDGSNPRTLVDAR 2994
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
+ WP G+ +D A R+Y+AD K ++ +++ K
Sbjct: 2995 VIWPTGIAVDHAAGRIYWADRKASLVETANIDGK 3028
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 45/207 (21%)
Query: 207 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKS 266
+++W D E I RI D + R T++S + GL +D +Y+ D D I+
Sbjct: 924 YIYWVD-SEGGSITRIHRDMTGRETVVS-GLDAIEGLAIDWVAGNMYWIDPSYDVIEVSR 981
Query: 267 LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGM 326
L +GS +L+SG + + A+ +
Sbjct: 982 L----------------------------------NGSGRYVLLSGNMDKPRAIVVHPYK 1007
Query: 327 LYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 386
Y +FW+DWG P+IER +DGSNR +++ + N L +D ++Y+ D
Sbjct: 1008 GY---------IFWSDWGVPPKIERAALDGSNRIVLVNVSVQLVNDLAIDFEEDKLYWCD 1058
Query: 387 SKLDFIDFCNYDGTGRQQVILIDLMVE 413
S+ D I+ N DGTGR+ V E
Sbjct: 1059 SRTDTIERVNLDGTGRETVFPPPFETE 1085
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 82/158 (51%), Gaps = 9/158 (5%)
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL--- 166
A ++S + S+ + + G H ++V VEGLAY+ + +YW
Sbjct: 1242 AFDYSERRIFYSDIQRGSINSVHFNGSGHT---VLVQKQGSVEGLAYEPVNNELYWTSHR 1298
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW-GENPRIERIGMD 225
D+ + R+ + D ++ +PRG+++ S + +FWT+W +P I++ ++
Sbjct: 1299 DASVGRVSLSDPTALPEKIVKLGTEDKPRGIVV--SSCIKRVFWTNWNSHHPSIQKSYLN 1356
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +II+T I PNG+ +D +++Y++D++LD I+
Sbjct: 1357 GYELESIITTDIRMPNGIAIDHQLQKLYWSDARLDKIE 1394
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 23/137 (16%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCT 335
I LYW++ + +I A ++GS LV+G + A+ LD G++
Sbjct: 333 IGENLYWVESNLD----QIEVAKLNGSFRRTLVAGNMESPRAIVLDPRYGLM-------- 380
Query: 336 RWLFWTDW-GENPRIERIGMDGSNRSTI-----ISTKIYWPNGLTLDIATRRVYFADSKL 389
FWTDW E PRIE+ M G R + ++ WPNGLTLD R+Y+ D++
Sbjct: 381 ---FWTDWDKEAPRIEQASMSGDGRRVVLRIDEVTQGGAWPNGLTLDFVALRIYWIDARS 437
Query: 390 DFIDFCNYDGTGRQQVI 406
D + YDG+ +++
Sbjct: 438 DSVHTSRYDGSDYHEIL 454
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 90/193 (46%), Gaps = 23/193 (11%)
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTN------------VNYSTIFRKLYWIDEGG 289
GL D + RR++++D + I+ + + Y + +LYW
Sbjct: 1240 GLAFDYSERRIFYSDIQRGSINSVHFNGSGHTVLVQKQGSVEGLAYEPVNNELYWTSHRD 1299
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDW-GENPR 348
V G+ ++ A + ++ + D G++ S C + +FWT+W +P
Sbjct: 1300 ASV----GRVSLSDPTA---LPEKIVKLGTEDKPRGIVVSS---CIKRVFWTNWNSHHPS 1349
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I++ ++G +II+T I PNG+ +D +++Y++D++LD I+ C+++G R ++
Sbjct: 1350 IQKSYLNGYELESIITTDIRMPNGIAIDHQLQKLYWSDARLDKIERCDFNGGDRHVLLSE 1409
Query: 409 DLMVEFTNDLMGD 421
F + GD
Sbjct: 1410 HPQHPFDLAVYGD 1422
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ I+ + + + G+A D +YW D+RL++IE CD NG +R VL ++ P D
Sbjct: 1361 ESIITTDIRMPNGIAIDHQLQKLYWSDARLDKIERCDFNGGDRHVLLSEHPQHP----FD 1416
Query: 201 PSPGTRWLFWTDW 213
+ ++FWTDW
Sbjct: 1417 LAVYGDFVFWTDW 1429
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 114/291 (39%), Gaps = 37/291 (12%)
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMML 199
D V G GL D++ IYW+D+R + + +G+ + I+ + ++ P + L
Sbjct: 409 DEVTQGGAWPNGLTLDFVALRIYWIDARSDSVHTSRYDGSDYHEILRGHETLSHPFAITL 468
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK- 258
+++WTDW N I +GS+ I+ P + + +R+
Sbjct: 469 ----FGNYVYWTDWRTNSVIRCNKWNGSD-VQIVQKAAIQPFDIQVFHPSRQPKGNGKNG 523
Query: 259 --LDFIDCKSLEIKT-NVNYSTIFRKLYWIDEGGNGV-----------PLKIGKANMDGS 304
+ C L + + N Y L + + G P +I ++D
Sbjct: 524 CAANNGGCSHLCLLSFNNTYKCNCPHLMRLGDDGRTCHSMERVLLFSRPNEIRGVDLDMP 583
Query: 305 NASIL---VSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
++ S ++ A+ LD ++ R ++W+D N I+R + GS T
Sbjct: 584 YYHVIPPFSSPKVIHAVKLDFDSKR---------RMIYWSDTHLN-EIKRASLLGSAVET 633
Query: 362 IISTKIYWPNGLTLDIATRRVYFAD--SKLDFIDFCNYDGTGRQQVILIDL 410
II T I P G +D +R ++F I C+ DG +I +L
Sbjct: 634 IIDTVIENPYGFAVDWISRNMFFTSYGEAGKHIFACSLDGEYVSSIIDTNL 684
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 101/265 (38%), Gaps = 28/265 (10%)
Query: 78 GYCSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C + +Y C+C L D TC ++ L+ S + I DL+
Sbjct: 529 GGCSHLCLLSFNNTYKCNCPHLMRLGDDGRTCHSMER---VLLFSRPNEIRGVDLDMPYY 585
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
H + L +D IYW D+ LN I+ G+ + I P G
Sbjct: 586 -HVIPPFSSPKVIHAVKLDFDSKRRMIYWSDTHLNEIKRASLLGSAVETIIDTVIENPYG 644
Query: 197 MMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+D +R +F+T +GE I +DG S+II T + P L + + +
Sbjct: 645 FAVDWI--SRNMFFTSYGEAGKHIFACSLDGEYVSSIIDTNLDSPGSLAVHPTLGLIMWT 702
Query: 256 D----------SKLD---------FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP-LK 295
D +K+D +D LE T++ LYW++ V L
Sbjct: 703 DHGSPHERIQVAKMDGSARKTLTSRLDNPKLEGSTSLTVDFETNHLYWVNRDQGMVQRLL 762
Query: 296 IGKANMDGSNASILVSGQLYEALAL 320
+ + +++ G+ ALA+
Sbjct: 763 LTSPDPVAETLDVVLGGEQPHALAI 787
>gi|427796811|gb|JAA63857.1| Putative prolow-density lipoprotein receptor-related protein 1,
partial [Rhipicephalus pulchellus]
Length = 4696
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 150/308 (48%), Gaps = 53/308 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
RC+ +T++CD DC +G+DEG CD C C + C PTP G C C G L+
Sbjct: 1224 RCIEVTRLCDKVPDCKDGSDEGGLCDEGLCNPND--CEDFCRPTPYGKTCYCRDGLQLAI 1281
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
+ +C D C Q G CSQ C K S+ C+C +GY L D TCK+ + + ++I SNR
Sbjct: 1282 NGRSCTDKKPCSQWGVCSQKCFQLKHSHKCTCEKGYELASDMFTCKSTDPATPYVIFSNR 1341
Query: 124 HSILVADLEEKG--------KDHRAQD--------------------------------- 142
H + DL K+ A D
Sbjct: 1342 HELRSVDLNTMSLRALITGLKNTIALDFYHSDSGDMLYWTDVVDDKIYRGSIISGSLSSI 1401
Query: 143 --IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+V +GL EGLA DWIG ++YW++S L++IEV NG+ R L N+ PR ++LD
Sbjct: 1402 EVVVETGLATAEGLAVDWIGENLYWVESNLDQIEVAKLNGSFRRTLVAGNMESPRAIVLD 1461
Query: 201 PSPGTRWLFWTDW-GENPRIERIGMDGSNRSTI-----ISTKIYWPNGLTLDIATRRVYF 254
P G +FWTDW E PRIE+ M G R + ++ WPNGLTLD R+Y+
Sbjct: 1462 PRYG--LMFWTDWDKEAPRIEQASMSGDGRRVVLRIDEVTQGGAWPNGLTLDFVALRIYW 1519
Query: 255 ADSKLDFI 262
D++ D +
Sbjct: 1520 IDARSDSV 1527
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 185/411 (45%), Gaps = 96/411 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVN + +C+G+ DC + +DE C++ EC+ CS C P+G C+C PG D
Sbjct: 2997 CVNDSLLCNGENDCGDFSDEDQ-CNVNECELSTHACSQLCEDRPIGYKCSCHPGFEPKYD 3055
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
C+D++EC C+ C NT GS+ C+C +GY TCKA + A L++SNR+
Sbjct: 3056 GRICEDVDECTTKYPCTHHCRNTYGSFACTCADGYFSIDAGRTCKANSSVRAHLLLSNRY 3115
Query: 125 SILVADLEEKGKDHRAQDI---VVSGLDLVE----------------------------- 152
I DL + + AQ++ V D VE
Sbjct: 3116 YIRQIDLHKISSEILAQNLTNSVALDFDSVEDCIYWSEVTAVGSSIKRMCLKGRQQHEVL 3175
Query: 153 ---------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
GLA DWIG ++YW D + IEV +G R VL + + +PR +++DP
Sbjct: 3176 HSTTVQNPDGLAVDWIGRNLYWCDKGKDTIEVSHLDGKFRKVLIRTGLEEPRAIVVDPVD 3235
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTII---STKIYWPNGLTLDIATRRVYFADSKLD 260
G +++WTDWGE+P I + MDGSN ++ S + WPN LTLD+ TR++++AD+K D
Sbjct: 3236 G--YMYWTDWGEHPYIGKAEMDGSNVQVLVNESSESMGWPNALTLDLITRQLFWADAKHD 3293
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV----SGQLYE 316
+ I AN+DG N IL + L+
Sbjct: 3294 Y----------------------------------IATANLDGGNIRILARNGPTSPLHH 3319
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 367
A+ L LY WTDW + + +N +T++ T I
Sbjct: 3320 VFAMTLFEDKLY-----------WTDWESKAVLYCNKNNCTNITTLVRTAI 3359
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 156/336 (46%), Gaps = 61/336 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPG-EILS 62
C + +CDG DCP+ +DEGP C + A+C + C + C P P G +C C G E
Sbjct: 153 CRRIAVLCDGHHDCPDFSDEGPFCSETAQCAN--ASCDHGCKPGPQGPVCFCKKGMEPHR 210
Query: 63 NDSVTCQDMNECEQPGYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAIN---HSAAFL 118
C D + C PG C Q CT+ KGS+ CSC EGY + C IN A L
Sbjct: 211 EMPSLCVDADPCSVPGTCDQNCTSGPKGSHNCSCVEGY--KAVGSQCFGINVPEDEEATL 268
Query: 119 IISNRHSIL--------------VADLEE------------------KGKDHRAQDIVVS 146
+ +N +I +A ++E +G + Q +VS
Sbjct: 269 LFANSINIQHIRLDGSPVAGNSSIAPVKESLAMDFNHVNRTVCWINHEGNETALQCALVS 328
Query: 147 GLDL--------------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
LD+ V +A DW+ G+ Y+LD I +C+ + + + + ++
Sbjct: 329 QLDVRWNLKLKDSFSLTTVNQMALDWVSGNWYFLDDVRETIFLCNASLSVCVTVIDVGLS 388
Query: 193 QPRGMMLDPSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
+PRG+ LDP G ++F T+WG P +ER +DG+ R+ ++ KI +P G+ +D+
Sbjct: 389 KPRGIALDPYKG--FMFVTEWGSAAPVLERAHLDGTERTKLVEQKIVYPFGIAVDLPREE 446
Query: 252 VYFADSKLDFIDCKSLE--IKTNVNYSTIFRKLYWI 285
VY+ D+ LD ++ S + +T V R LY I
Sbjct: 447 VYWVDTYLDMVERISYDGSRRTTVFRGAPMRNLYGI 482
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 91/152 (59%), Gaps = 5/152 (3%)
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
+D ++ VVSGLD +EGLA DW+ G++YW+D + IEV NG+ R VL N+ +PR
Sbjct: 2027 RDMTGRETVVSGLDAIEGLAIDWVAGNMYWIDPSYDVIEVSRLNGSGRYVLLSGNMDKPR 2086
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+++ P G ++FW+DWG P+IER +DGSNR +++ + N L +D ++Y+
Sbjct: 2087 AIVVHPYKG--YIFWSDWGVPPKIERAALDGSNRIVLVNVSVQLVNDLAIDFEEDKLYWC 2144
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDE 287
DS+ D I+ +L+ T+F + +E
Sbjct: 2145 DSRTDTIERVNLD---GTGRETVFPPPFETEE 2173
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT-CPPGEILSN 63
CV + VCDGK DC + +DE D +C H C P C + N
Sbjct: 3796 CVQGSGVCDGKDDCGDNSDE----DTPQCHH--------CKPHEFRCKSQRCIASNLFCN 3843
Query: 64 DSVTCQDMNECE-------QPGYCSQMCTNTKGS-YICSCNEGYVLEYD-NHTCKAINHS 114
C D + E + G CS C K S + CSC G+V ++ N++C A
Sbjct: 3844 GVDDCGDGTDEEDCDTGPCRFGTCSHTCNIKKNSTHSCSCAHGFVKDHRRNNSCVAQGKK 3903
Query: 115 AAFLIISN---RH----------------------SILVADL------------------ 131
A L+ S RH I DL
Sbjct: 3904 AYLLVASENELRHVDPYKSSHQDGRGMLGNLDPSNRIHAVDLFYNDSQVLVFWASLHMGA 3963
Query: 132 -----------EEKGKDHR--AQDIVVSGLDLVE--GLAYDWIGGHIYWLDSRLNRIEVC 176
E G+ R A D V +L E GLA DW+G +YW+D+ + I V
Sbjct: 3964 IYRRRLPSLPQTENGRRKRQAASDAAVLLGNLTEPRGLAVDWVGQMLYWVDAGEHSISVA 4023
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 236
+G R L +N+ QP + +DP G +LFWT+ G PRI R +DGSN T++ +
Sbjct: 4024 SLDGRLRRTLISENLDQPSDIAVDPHSG--YLFWTETGSKPRIGRANLDGSNPRTLVDAR 4081
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
+ WP G+ +D A R+Y+AD K ++ +++ K
Sbjct: 4082 VIWPTGIAVDHAAGRIYWADRKASLVETANIDGK 4115
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 81/145 (55%), Gaps = 14/145 (9%)
Query: 131 LEEKGKDHRAQDIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAK 188
+E +G D +++ S GL+ EGLA DW G ++YW D I V +N T R L
Sbjct: 649 IERQGLDGSKREVFTSKGLNNCEGLAVDWAGRNLYWTDEGHLGIWVARLDNATLRRQLVA 708
Query: 189 DNITQPRGMMLDPSPGTRWLFWTDWGENP----------RIERIGMDGSNRSTIISTKIY 238
N++ PR +++DP G +++W+DW P +IER MDGS+R +S ++
Sbjct: 709 LNMSHPRAIVVDPKRG--YMYWSDWSTEPYPPGDGRDGGKIERTYMDGSHREVFVSQDLH 766
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
WPNGL++D A R++Y+ D I+
Sbjct: 767 WPNGLSIDYANRQLYWCDVYFHRIE 791
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 95/223 (42%), Gaps = 55/223 (24%)
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
R LD TR ++++D + IER G+DGS R S + GL +D A R
Sbjct: 626 RPTALDYDAKTRTVYYSD-AQQFVIERQGLDGSKREVFTSKGLNNCEGLAVDWAGR---- 680
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV-PLKIGKANMDGSNASILVSGQ 313
LYW DEG G+ ++ A + ++ +S
Sbjct: 681 --------------------------NLYWTDEGHLGIWVARLDNATLRRQLVALNMSHP 714
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENP----------RIERIGMDGSNRSTII 363
A+ +D + G +Y W+DW P +IER MDGS+R +
Sbjct: 715 --RAIVVDPKRGYMY-----------WSDWSTEPYPPGDGRDGGKIERTYMDGSHREVFV 761
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
S ++WPNGL++D A R++Y+ D I+ DG GR+ ++
Sbjct: 762 SQDLHWPNGLSIDYANRQLYWCDVYFHRIERIGLDGKGREVLV 804
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 45/207 (21%)
Query: 207 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKS 266
+++W D E I RI D + R T++S + GL +D +Y+ D D I+
Sbjct: 2011 YIYWVD-SEGGSITRIHRDMTGRETVVS-GLDAIEGLAIDWVAGNMYWIDPSYDVIE--- 2065
Query: 267 LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGM 326
+ ++GS +L+SG + + A+ +
Sbjct: 2066 -------------------------------VSRLNGSGRYVLLSGNMDKPRAIVVHPYK 2094
Query: 327 LYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 386
Y +FW+DWG P+IER +DGSNR +++ + N L +D ++Y+ D
Sbjct: 2095 GY---------IFWSDWGVPPKIERAALDGSNRIVLVNVSVQLVNDLAIDFEEDKLYWCD 2145
Query: 387 SKLDFIDFCNYDGTGRQQVILIDLMVE 413
S+ D I+ N DGTGR+ V E
Sbjct: 2146 SRTDTIERVNLDGTGRETVFPPPFETE 2172
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 82/158 (51%), Gaps = 9/158 (5%)
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL--- 166
A ++S + S+ + + G H ++V VEGLAY+ + +YW
Sbjct: 2329 AFDYSERRIFYSDIQRGSINSVHFNGSGHT---VLVQKQGSVEGLAYEPVNNELYWTSHR 2385
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW-GENPRIERIGMD 225
D+ + R+ + D ++ +PRG+++ S + +FWT+W +P I++ ++
Sbjct: 2386 DASVGRVSLSDPTALPEKIVKLGTEDKPRGIVV--SSCIKRVFWTNWNSHHPSIQKSYLN 2443
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +II+T I PNG+ +D +++Y++D++LD I+
Sbjct: 2444 GYELESIITTDIRMPNGIAIDHQLQKLYWSDARLDKIE 2481
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 23/137 (16%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCT 335
I LYW++ + +I A ++GS LV+G + A+ LD G++
Sbjct: 1420 IGENLYWVESNLD----QIEVAKLNGSFRRTLVAGNMESPRAIVLDPRYGLM-------- 1467
Query: 336 RWLFWTDW-GENPRIERIGMDGSNRSTI-----ISTKIYWPNGLTLDIATRRVYFADSKL 389
FWTDW E PRIE+ M G R + ++ WPNGLTLD R+Y+ D++
Sbjct: 1468 ---FWTDWDKEAPRIEQASMSGDGRRVVLRIDEVTQGGAWPNGLTLDFVALRIYWIDARS 1524
Query: 390 DFIDFCNYDGTGRQQVI 406
D + YDG+ +++
Sbjct: 1525 DSVHTSRYDGSDYHEIL 1541
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 90/193 (46%), Gaps = 23/193 (11%)
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTN------------VNYSTIFRKLYWIDEGG 289
GL D + RR++++D + I+ + + Y + +LYW
Sbjct: 2327 GLAFDYSERRIFYSDIQRGSINSVHFNGSGHTVLVQKQGSVEGLAYEPVNNELYWTSHRD 2386
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDW-GENPR 348
+G+ ++ A + ++ + D G++ S C + +FWT+W +P
Sbjct: 2387 ----ASVGRVSLSDPTA---LPEKIVKLGTEDKPRGIVVSS---CIKRVFWTNWNSHHPS 2436
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I++ ++G +II+T I PNG+ +D +++Y++D++LD I+ C+++G R ++
Sbjct: 2437 IQKSYLNGYELESIITTDIRMPNGIAIDHQLQKLYWSDARLDKIERCDFNGGDRHVLLSE 2496
Query: 409 DLMVEFTNDLMGD 421
F + GD
Sbjct: 2497 HPQHPFDLAVYGD 2509
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 337 WLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
++F T+WG P +ER +DG+ R+ ++ KI +P G+ +D+ VY+ D+ LD ++
Sbjct: 401 FMFVTEWGSAAPVLERAHLDGTERTKLVEQKIVYPFGIAVDLPREEVYWVDTYLDMVERI 460
Query: 396 NYDGTGRQQVI 406
+YDG+ R V
Sbjct: 461 SYDGSRRTTVF 471
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ I+ + + + G+A D +YW D+RL++IE CD NG +R VL ++ P D
Sbjct: 2448 ESIITTDIRMPNGIAIDHQLQKLYWSDARLDKIERCDFNGGDRHVLLSEHPQHP----FD 2503
Query: 201 PSPGTRWLFWTDW 213
+ ++FWTDW
Sbjct: 2504 LAVYGDFVFWTDW 2516
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 114/291 (39%), Gaps = 37/291 (12%)
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMML 199
D V G GL D++ IYW+D+R + + +G+ + I+ + ++ P + L
Sbjct: 1496 DEVTQGGAWPNGLTLDFVALRIYWIDARSDSVHTSRYDGSDYHEILRGHETLSHPFAITL 1555
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK- 258
+++WTDW N I +GS+ I+ P + + +R+
Sbjct: 1556 ----FGNYVYWTDWRTNSVIRCNKWNGSD-VQIVQKAAIQPFDIQVFHPSRQPKGNGKNG 1610
Query: 259 --LDFIDCKSLEIKT-NVNYSTIFRKLYWIDEGGNGV-----------PLKIGKANMDGS 304
+ C L + + N Y L + + G P +I ++D
Sbjct: 1611 CAANNGGCSHLCLLSFNNTYKCNCPHLMRLGDDGRTCHSMERVLLFSRPNEIRGVDLDMP 1670
Query: 305 NASIL---VSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
++ S ++ A+ LD ++ R ++W+D N I+R + GS T
Sbjct: 1671 YYHVIPPFSSPKVIHAVKLDFDSKR---------RMIYWSDTHLN-EIKRASLLGSAVET 1720
Query: 362 IISTKIYWPNGLTLDIATRRVYFAD--SKLDFIDFCNYDGTGRQQVILIDL 410
II T I P G +D +R ++F I C+ DG +I +L
Sbjct: 1721 IIDTVIENPYGFAVDWISRNMFFTSYGEAGKHIFACSLDGEYVSSIIDTNL 1771
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 101/265 (38%), Gaps = 28/265 (10%)
Query: 78 GYCSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C + +Y C+C L D TC ++ L+ S + I DL+
Sbjct: 1616 GGCSHLCLLSFNNTYKCNCPHLMRLGDDGRTCHSMER---VLLFSRPNEIRGVDLDMPYY 1672
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
H + L +D IYW D+ LN I+ G+ + I P G
Sbjct: 1673 -HVIPPFSSPKVIHAVKLDFDSKRRMIYWSDTHLNEIKRASLLGSAVETIIDTVIENPYG 1731
Query: 197 MMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+D +R +F+T +GE I +DG S+II T + P L + + +
Sbjct: 1732 FAVDWI--SRNMFFTSYGEAGKHIFACSLDGEYVSSIIDTNLDSPGSLAVHPTLGLIMWT 1789
Query: 256 D----------SKLD---------FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP-LK 295
D +K+D +D LE T++ LYW++ V L
Sbjct: 1790 DHGSPHERIQVAKMDGSARKTLTSRLDNPKLEGSTSLTVDFETNHLYWVNRDQGMVQRLL 1849
Query: 296 IGKANMDGSNASILVSGQLYEALAL 320
+ + +++ G+ ALA+
Sbjct: 1850 LTSPDPVAETLDVVLGGEQPHALAI 1874
>gi|71892452|ref|NP_001025454.1| low-density lipoprotein receptor precursor [Danio rerio]
gi|30385210|gb|AAP22970.1| low density lipoprotein receptor [Danio rerio]
Length = 911
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 166/310 (53%), Gaps = 32/310 (10%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+++ KVC+ + DC + +DE CD EC + G CS+ C+ +G C CP G L
Sbjct: 285 CISMEKVCNKQRDCRDWSDEPLRECDSNECLYNNGGCSHICNDLKIGYECLCPTGFRLV- 343
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D C+D++EC P CSQ+C N GSY C C +GY ++ + CKAI + A+L +NR
Sbjct: 344 DKRRCEDIDECANPDTCSQICVNQMGSYKCECEDGYQMDPASKACKAIG-TIAYLFFTNR 402
Query: 124 HSILVADLEEKGKDHRAQDI-VVSGLDLVEGLAYDWIGGHIYWLDSRLNRI-------EV 175
H + L+ R++ I V+ L V L + IYW D L +I V
Sbjct: 403 HEVRKMTLD------RSEYIRVIPRLKNVVALDMNIASRDIYWSDLSLKKIYSIRGAISV 456
Query: 176 CDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST 235
+G+ R L K+N+ +PR +++DP ++FWTDWG +IE+ G++G +RST+++
Sbjct: 457 ATADGSRRKTLFKENLAKPRAIVVDPI--KNFMFWTDWGTPAKIEKSGLNGVDRSTLVAD 514
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE-------------IKTNVNYSTIFRKL 282
I WPNG+TLD+ T R+Y+ DSKL + S++ + ++ + K+
Sbjct: 515 DIVWPNGITLDLLTERLYWVDSKLHTLSSISVQGDGRRTLIIDQGKLAHPLSLTVFEEKV 574
Query: 283 YWIDEGGNGV 292
+W D N +
Sbjct: 575 FWTDVSNNAI 584
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 40/201 (19%)
Query: 207 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKS 266
+LF+T+ E + ++ +D S +I ++ L ++IA+R +Y++D L
Sbjct: 396 YLFFTNRHE---VRKMTLDRSEYIRVIP-RLKNVVALDMNIASRDIYWSDLSL------- 444
Query: 267 LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGM 326
+K+Y I I A DGS L L + A+ ++
Sbjct: 445 -------------KKIYSIRGA-------ISVATADGSRRKTLFKENLAKPRAIVVD--- 481
Query: 327 LYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 386
++FWTDWG +IE+ G++G +RST+++ I WPNG+TLD+ T R+Y+ D
Sbjct: 482 ------PIKNFMFWTDWGTPAKIEKSGLNGVDRSTLVADDIVWPNGITLDLLTERLYWVD 535
Query: 387 SKLDFIDFCNYDGTGRQQVIL 407
SKL + + G GR+ +I+
Sbjct: 536 SKLHTLSSISVQGDGRRTLII 556
>gi|431896907|gb|ELK06171.1| Low-density lipoprotein receptor-related protein 8 [Pteropus
alecto]
Length = 1001
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 150/298 (50%), Gaps = 46/298 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CV+ KVCD + DC + +DE L EC H G CS+ C +G CTCP G L
Sbjct: 350 CVDGGKVCDAQRDCRDWSDEPLKESGLNECLHNNGGCSHICTDLKIGFECTCPAGYRLL- 408
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D TC D++ECE P CSQ+C N KG + C C+ GY ++ CKA+ + LI +NR
Sbjct: 409 DQKTCGDIDECEDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAVAGRSPSLIFTNR 468
Query: 124 HSILVADL-----------------------------------------EEKGKDHRAQD 142
H + DL +K D Q+
Sbjct: 469 HEVRRIDLVKRDYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPAEQE 528
Query: 143 IVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+++ L EGLA DW+ HIYW DS I V +G R L ++++PR + +DP
Sbjct: 529 VLIDKQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRCTLFSQDLSEPRAIAVDP 588
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++W+DWG +IE+ G++G +R ++S I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 589 LRG--FMYWSDWGYQAKIEKSGLNGMDRQILVSDNIEWPNGITLDLLNQRLYWVDSKL 644
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 172/417 (41%), Gaps = 79/417 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC---DLAECKHKFGLCSNTCHPTPLGALCTCPPG-EI 60
CV+ K+C+ + DCP+G+DE GC E +F S C G +C
Sbjct: 309 CVSAIKLCNQEQDCPDGSDEA-GCLQESTCEGPRRFQCKSGEC--VDGGKVCDAQRDCRD 365
Query: 61 LSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SA 115
S++ + +NEC G CS +CT+ K + C+C GY L D TC I+ A
Sbjct: 366 WSDEPLKESGLNECLHNNGGCSHICTDLKIGFECTCPAGYRL-LDQKTCGDIDECEDPDA 424
Query: 116 AFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEV 175
I N + + D + V G + I + + + RI++
Sbjct: 425 CSQICVNYKGYFKCECHPGYE----MDTLTKNCKAVAGRSPSLIFTNRH----EVRRIDL 476
Query: 176 CDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RST 231
+ + I + K+ + LD T ++W D +I MD ++ +
Sbjct: 477 VKRDYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPAEQEV 529
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+I +++ P GL +D + + +YW D G
Sbjct: 530 LIDKQLHSPEGLAVDW------------------------------VHKHIYWTDSGNK- 558
Query: 292 VPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
I A +DG L S L E A+A+D G +Y W+DWG +I
Sbjct: 559 ---TISVATVDGGRRCTLFSQDLSEPRAIAVDPLRGFMY-----------WSDWGYQAKI 604
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
E+ G++G +R ++S I WPNG+TLD+ +R+Y+ DSKL + ++ G R+ +I
Sbjct: 605 EKSGLNGMDRQILVSDNIEWPNGITLDLLNQRLYWVDSKLHQLSSIDFSGGNRKMLI 661
>gi|332236955|ref|XP_003267665.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 1B [Nomascus leucogenys]
Length = 4634
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 183/420 (43%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+GK DCP+G+DEG CD EC G CS C P G +C+CP G L+
Sbjct: 1185 CLQPEKLCNGKKDCPDGSDEGDLCD--ECSLNNGGCSYHCSVVPERGIVCSCPEGLQLNK 1242
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC EG+ L+ D +C +++ AF+I S R
Sbjct: 1243 DNKTCEIVDYCSNHLKCSQVCEQHKRTVKCSCYEGWKLDVDGESCTSVDPFEAFIIFSIR 1302
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1303 HEIRRIDLHRRDYSLLVPGLRNTIALDFHFSQSLLYWTDVVEDRIYRGKLSESGGVSAIE 1362
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 1363 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDP 1422
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 1423 RYGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAR 1480
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG+N ++ G Y +
Sbjct: 1481 SDAI------------YSALY----------------------DGTNMIEIIRGHEYLSH 1506
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 1507 PFAVS---LYGSE------VYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYHPS 1557
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 144/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +CD K DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 2937 RCIPSGGLCDNKDDCGDGSDE-RNCHINECLSKKVSGCSQDCQDLPVSYKCKCWPGFQLK 2995
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C +GY ++ DN + CK+++ FLI++
Sbjct: 2996 DDGKTCVDIDECSSDFPCSQQCINTYGTYRCLCTDGYEIQPDNPNGCKSLSDEEPFLILA 3055
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
+ H I L ++G D+R + I
Sbjct: 3056 DHHEIRKISTDGSNYTLLKQGLNNVIAIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDI 3115
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG +L + PR + LDP
Sbjct: 3116 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTMLVSKRLKFPRDLSLDPR 3175
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +L+W D E P I R+GMDG+N+S +I TKI P LT+D RR+Y+AD
Sbjct: 3176 AG--YLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNRRLYWAD 3227
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 149/312 (47%), Gaps = 55/312 (17%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCD--LAECKHKFGLCSNTCHPTPLGALCTCPPGE 59
++CV+L+++C+G DCP+G DEG C L+ C+ C C C C G
Sbjct: 122 TNKCVHLSQLCNGVLDCPDGYDEGVHCQELLSNCQQLN--CQYRCTMVRNSTRCYCEDGF 179
Query: 60 ILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI---NHSAA 116
+ D +C+D +EC G CSQ C NT GSYICSC EGY+++ DN +CKA
Sbjct: 180 EIKEDGRSCKDQDECAVYGTCSQTCRNTHGSYICSCVEGYLMQPDNRSCKAKIEPTDRPP 239
Query: 117 FLIISNRHSI-------------------------------LVADLEEKGKDHRAQDI-- 143
L+I+N +I ++ +E + ++ + I
Sbjct: 240 ILLIANFETIEVFYLNGSKMATLSSVNGNEIHTLDFIYNEDMICWIESRESSNQLKCIQI 299
Query: 144 -------------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ V+ +A DW+ ++Y++D +RI VC+ NG+ + L
Sbjct: 300 TKAGGLTDEWTINILQSFHNVQQMAIDWLTRNLYFVDHVSDRIFVCNYNGSVCVTLIDLE 359
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P+ + +DP G LF+TD+G ++ER MDG NR+ II +K P L LD+ +
Sbjct: 360 LHNPKAIAVDPIAGK--LFFTDYGNVAKVERCDMDGMNRTRIIGSKTEQPAALALDLVNK 417
Query: 251 RVYFADSKLDFI 262
VY+ D L+ +
Sbjct: 418 LVYWVDLYLECV 429
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 138/323 (42%), Gaps = 61/323 (18%)
Query: 69 QDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
Q N C+ G CSQ+C T + + C C GY L+ + +C+ I +FL+ S I
Sbjct: 1868 QGSNSCQLNNGGCSQLCLPTSETTRSCMCTVGYYLQKNRMSCQGIE---SFLMYSVHEGI 1924
Query: 127 LVADLEEKGK----------------DHRAQ-------------------------DIVV 145
LE K D A+ DIV
Sbjct: 1925 RGIPLEPSDKMDALMPISGTSFAVGIDFHAENDTIYWTDMGFNKISRAKRDQTWKEDIVT 1984
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + + P G
Sbjct: 1985 NGLGRVEGIAIDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIAVHPEKGL 2044
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
LFWT+WG+ P I + +DGS R+ ++S I WPNG+++D ++Y+ D++ D I+
Sbjct: 2045 --LFWTEWGQMPCIGKARLDGSERAVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERI 2102
Query: 266 SLEIKTN------------VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
LE N + + +YW D ++ G N D + + +G
Sbjct: 2103 DLETGGNREMVLSGSNVDMFSVAVFGAYIYWSDRAHANGSVRRGHKN-DATETITMRTGL 2161
Query: 314 LYEALALDLENGMLYYSTLKCTR 336
+ + N + T C R
Sbjct: 2162 GVNLKEVKIFNRVREKGTNVCAR 2184
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 134/328 (40%), Gaps = 74/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSNT--CHPTPLGALCTCPP 57
+C+ + CD DC +G+DE GC +A C+ C + C+ C C P
Sbjct: 3808 KCIPMDLQCDRLDDCGDGSDE-QGCRIAPTEYTCEDNVNPCGDDAYCNQIKTSVFCRCKP 3866
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G + + C+D+NEC G CS C N +GSY C C++ + + N+TC A
Sbjct: 3867 GFQRNMKNRQCEDLNECLVFGTCSHQCINVEGSYKCVCDQNF--QERNNTCIAKGSEDQV 3924
Query: 118 LIISNRHSIL--------------VADLEE------------------------------ 133
L I+N IL ++ +E
Sbjct: 3925 LYIANDTDILGFIYPFNYSGDHQQISHIEHNSRITGMDVYYXRDMIIWSTQFNPGGIFYK 3984
Query: 134 --KGKDHRAQD--IVVSGLDLVEGLAYDWIGGHIYWLD-SRLN--------------RIE 174
G++ R + ++ +A DW+ G+IYW D SR++ I
Sbjct: 3985 TIHGREKRQANSGLICPEFKRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSIN 4044
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V NG N L + +P + ++P G ++WT G++ IE MDG+ R ++
Sbjct: 4045 VGQLNGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVVGDHSHIEEAAMDGTLRRILVQ 4102
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D + R+Y+AD +L I
Sbjct: 4103 KNLQRPTGLAVDYFSERIYWADFELSII 4130
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 107/240 (44%), Gaps = 55/240 (22%)
Query: 77 PGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA-DLEE 133
PG CS +C +++ + C C G+ L D +CK + R I+ DL
Sbjct: 518 PGGCSHICLLSSSYKTRTCRCRTGFNLGSDGRSCKRPKNELFLFYGKGRPGIVRGMDLNT 577
Query: 134 KGKDH-----------RAQD------------------------------IVVSGLDLVE 152
K D RA D I+ LD VE
Sbjct: 578 KIADEYMIPIENLVNPRALDFHAETNYIYFADTTSFLIGRQKIDGTERETILKDDLDNVE 637
Query: 153 GLAYDWIGGHIYWL-DSRLNRIEVC--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
G+A DWIG ++YW D I V ++ +R L + ++ PRG+++DP G W++
Sbjct: 638 GIAVDWIGNNLYWTNDGHRKTINVARLEKASQSRKTLLEGEMSHPRGIVVDPLNG--WMY 695
Query: 210 WTDWGENP------RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
WTDW E+ RIE+ MDG NR +++K+ WPNGLTLD T +Y+ D+ D I+
Sbjct: 696 WTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTNTLYWCDAYYDHIE 755
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 156/424 (36%), Gaps = 79/424 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNT-CHPTPLGA--LCTCP 56
C+ K+C+G DC + +DE P CK CSN C P L L C
Sbjct: 3764 CLQSEKMCNGIDDCGDNSDEDHCGGKPTYKARPCKKDEFTCSNKKCIPMDLQCDRLDDCG 3823
Query: 57 PGE-----ILSNDSVTCQD-MNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110
G ++ TC+D +N C YC+Q+ K S C C G+ N C+
Sbjct: 3824 DGSDEQGCRIAPTEYTCEDNVNPCGDDAYCNQI----KTSVFCRCKPGFQRNMKNRQCED 3879
Query: 111 INHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL 170
+N F S+ Q I V G +Y + +
Sbjct: 3880 LNECLVFGTCSH------------------QCINVEG-------SYKCVCDQNF-----Q 3909
Query: 171 NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS-NR 229
R C G+ VL N T G + + + N RI GMD R
Sbjct: 3910 ERNNTCIAKGSEDQVLYIANDTDILGFIYPFNYSGDHQQISHIEHNSRI--TGMDVYYXR 3967
Query: 230 STIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
II + + P G+ I R A+S L C + ++ + +YW D
Sbjct: 3968 DMIIWSTQFNPGGIFYKTIHGREKRQANSGLI---CPEFKRPRDIAVDWVAGNIYWTDHS 4024
Query: 289 G-----------NGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ I ++G N + L++ E A+A++ + GM+Y
Sbjct: 4025 RMHWFSYYTTHWTSLRYSINVGQLNGPNCTRLLTNMAGEPYAIAVNPKRGMMY------- 4077
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WT G++ IE MDG+ R ++ + P GL +D + R+Y+AD +L I
Sbjct: 4078 ----WTVVGDHSHIEEAAMDGTLRRILVQKNLQRPTGLAVDYFSERIYWADFELSIIGSV 4133
Query: 396 NYDG 399
YDG
Sbjct: 4134 LYDG 4137
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G N ++ST I PNGLT+D ++YF+D L
Sbjct: 2362 ECQNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGT 2421
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 2422 IERCEYDGSQRHVIV 2436
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 138/310 (44%), Gaps = 39/310 (12%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS MC N S C+C L D TC + FL+ + R I D++
Sbjct: 1573 GPCSHMCLINHNRSAACACPHLMKLSSDKKTCYEMK---KFLLYARRSEIRGVDIDNPYF 1629
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ V +D V + +D +YW D + I+ NGT + +I RG
Sbjct: 1630 NFITA-FTVPDIDDVTVIDFDASEERLYWTDIKTQTIKRAFINGTGLETVISRDIQSIRG 1688
Query: 197 MMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIIS--------------TKIYWPN 241
+ +D +R L+W + + +I +DGS +++II K+YW +
Sbjct: 1689 LAVDWV--SRNLYWISSEFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD 1746
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
G T+++A + ++SK+ F + K + +++Y + KLYWI GNG I + N+
Sbjct: 1747 GNTINMAN--MDGSNSKILFQNQKE-PVGLSIDY--VENKLYWI-SSGNGT---INRCNL 1797
Query: 302 DGSNASILVS--GQLYEALALDLENGMLYYSTLKCTRWLFWTDW-GENPRIERIGMDGSN 358
DG N ++ S +L +A AL + + L+++ + + G NP I R +
Sbjct: 1798 DGGNLEVIESMKEELTKATALTIMDKKLWWADQNLAQLGTCSKRDGRNPTILR-----NK 1852
Query: 359 RSTIISTKIY 368
S ++ K+Y
Sbjct: 1853 TSGVVHMKVY 1862
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 95/224 (42%), Gaps = 33/224 (14%)
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++D L+WTD + I+R ++G+ T+IS I GL +D +R +Y+ S
Sbjct: 1645 VIDFDASEERLYWTDI-KTQTIKRAFINGTGLETVISRDIQSIRGLAVDWVSRNLYWISS 1703
Query: 258 KLDFIDCKSLEIKTNVNYSTIFR--------------KLYWIDEGGNGVPLKIGKANMDG 303
+ D + ++ S I KLYW D GN I ANMDG
Sbjct: 1704 EFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD--GN----TINMANMDG 1757
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
SN+ IL Q E + L ++ Y K L+W G N I R +DG N I
Sbjct: 1758 SNSKILFQNQ-KEPVGLSID-----YVENK----LYWISSG-NGTINRCNLDGGNLEVIE 1806
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
S K L I +++++AD L + C+ GR IL
Sbjct: 1807 SMKEELTKATALTIMDKKLWWADQNLAQLGTCS-KRDGRNPTIL 1849
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 94/242 (38%), Gaps = 58/242 (23%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-----NRIEVCDENGTNR---IVLAKDNIT 192
+ ++V + VEGLAY +YW S + ++ +R I +++D+
Sbjct: 2296 RQVIVENVGSVEGLAYHRAWDTLYWTSSTTSSITRHTVDQTRPGAFDREAVITMSEDD-- 2353
Query: 193 QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
P + LD +FWT+W E +P I R + G N ++ST I PNGLT+D +
Sbjct: 2354 HPHVLALDEC--QNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEK 2411
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+YF+D L I+ + DGS ++V
Sbjct: 2412 LYFSDGSLGTIE----------------------------------RCEYDGSQRHVIVK 2437
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
L+L + + ++FW+DWG + G + + S + P
Sbjct: 2438 SGPGTFLSLAVYDN-----------YIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPM 2486
Query: 372 GL 373
G+
Sbjct: 2487 GI 2488
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ +V + + GL D+ +Y+ D L IE C+ +G+ R V+ K G L
Sbjct: 2389 AQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGTIERCEYDGSQRHVIVKSG----PGTFL 2444
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ ++FW+DWG + G + + S + P G+
Sbjct: 2445 SLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGI 2488
>gi|395519503|ref|XP_003763885.1| PREDICTED: low-density lipoprotein receptor-related protein
1B-like, partial [Sarcophilus harrisii]
Length = 3529
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/420 (32%), Positives = 183/420 (43%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+G+ DCP+G+DEG CD EC G CSN C P G +C+CP G L+
Sbjct: 187 CLQPEKLCNGRKDCPDGSDEGDLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPSGLQLNP 244
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C + CSQ+C K S CSC EG+ L D +C +I+ AF+I S R
Sbjct: 245 DNKTCEIVDYCSRHLKCSQVCEQHKYSVKCSCYEGWKLNMDGESCTSIDPFEAFIIFSIR 304
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 305 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVGAIE 364
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +GT R L + PR + LDP
Sbjct: 365 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGTLRTTLIAGAMEHPRAIALDP 424
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 425 RYGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAR 482
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG+ ++ G Y +
Sbjct: 483 SDAI------------YSALY----------------------DGTGMIEIIRGHEYLSH 508
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 509 PFAVS---LYGSE------VYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYHPS 559
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 144/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +C+ K DC +G+DE C + EC K CS C P+G C C PG L
Sbjct: 1832 RCIPNRSLCNSKDDCGDGSDE-RNCHINECLSKKVSGCSQDCQDLPVGYKCKCWPGFQLK 1890
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC DM+EC CSQ C NT G+Y C C EGY ++ DN + CK+++ FLI++
Sbjct: 1891 DDGKTCMDMDECSSGFPCSQQCINTYGTYKCLCTEGYEIQPDNPNGCKSLSDEEPFLILA 1950
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
+ H I L ++G D+R + I
Sbjct: 1951 DHHEIRKISTDGSNYTLLKQGLNNVIAIDFDYREEFIYWIDSSRPNGSRINRMYLNGSDI 2010
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG +L + PR + LDP
Sbjct: 2011 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTILVSKRLKFPRDLSLDPR 2070
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +L+W D E P I R+GMDG+N+S +I TKI P LT+D R+Y+AD
Sbjct: 2071 AG--YLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNSRLYWAD 2122
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 136/304 (44%), Gaps = 61/304 (20%)
Query: 64 DSVTCQDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D T + N C+ G CSQ+C T + + C C GY L + +C+ I +FL+ S
Sbjct: 868 DKETQRGSNSCQLNNGGCSQLCLPTSETTRTCMCTVGYNLRKNRMSCQGIE---SFLMYS 924
Query: 122 NRHSILVADLEEKGK----------------DHRAQ------------------------ 141
I LE K D A+
Sbjct: 925 VHEGIRGIPLEPTDKMDALMPISGTSFAVGIDFHAENDTIYWTDMGFNKISRAKRDQTWK 984
Query: 142 -DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
DI+ +GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + L
Sbjct: 985 EDIITNGLGRVEGIAVDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSLALH 1044
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +LFWT+WG+NP I + +DGS + ++S I WPNG+++D ++Y+ D+++D
Sbjct: 1045 PEKG--YLFWTEWGQNPCIGKARLDGSEKVILVSMGIAWPNGVSIDYEENKLYWCDARID 1102
Query: 261 FIDCKSLEIKTN------------VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
I+ LE N + + +YW D ++ G N D ++A
Sbjct: 1103 KIERIDLESGGNREIVLSGSNVDMFSVAVFGAYIYWSDRAHANGSIRRGHKN-DATDAVT 1161
Query: 309 LVSG 312
+ +G
Sbjct: 1162 MRTG 1165
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 135/328 (41%), Gaps = 74/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSNT--CHPTPLGALCTCPP 57
+C+ + CD DC +G+DE GC C+ C + C+ T C C P
Sbjct: 2703 KCIPMELQCDRFDDCGDGSDE-QGCRTVPSEYTCEDNVNPCGDDAYCNQTQTSVFCRCKP 2761
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G + + C+D+NEC G CS C N KGSY C C++ Y + N+TC A +
Sbjct: 2762 GFQRNMRNRQCEDLNECLVFGTCSHQCINMKGSYKCICDQNY--KEKNNTCIAKSSEDQV 2819
Query: 118 LIISNRHSIL--------------VADLEEKGK--------------------------- 136
L ISN IL ++ +E +
Sbjct: 2820 LYISNDTDILGFIYPFNYSGDHQQISHIEHNSRITGMDVYYQRDMIIWSTQFNPGGIFYK 2879
Query: 137 --DHRAQDIVVSGLDLVE-----GLAYDWIGGHIYWLD-SRLN--------------RIE 174
R + SGL E +A DWI G+IYW D SR++ I
Sbjct: 2880 RVHGRERRQTTSGLICPEFKRPRDIAVDWIAGNIYWTDHSRMHWFSYYTTHWTSLRYSIN 2939
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V NG N L + +P + ++P G ++WT G++ IE MDG+ R ++
Sbjct: 2940 VGQLNGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVVGDHSHIEEAAMDGTLRRILVQ 2997
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D ++R+Y+AD +L I
Sbjct: 2998 KNLQRPTGLAVDQFSQRIYWADFELSII 3025
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 140/349 (40%), Gaps = 64/349 (18%)
Query: 67 TCQD-MNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR-- 123
TC+D +N C YC+Q T+ S C C G+ N C+ +N F S++
Sbjct: 2734 TCEDNVNPCGDDAYCNQ----TQTSVFCRCKPGFQRNMRNRQCEDLNECLVFGTCSHQCI 2789
Query: 124 ----HSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDW-IGGHIYWLDSRLNRIEVCDE 178
+ D K K++ I S D V ++ D I G IY + + ++
Sbjct: 2790 NMKGSYKCICDQNYKEKNNTC--IAKSSEDQVLYISNDTDILGFIYPFNYSGDHQQISHI 2847
Query: 179 NGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR----STIIS 234
+RI ++ R M++ W+ I + G R S +I
Sbjct: 2848 EHNSRITGM--DVYYQRDMII----------WSTQFNPGGIFYKRVHGRERRQTTSGLIC 2895
Query: 235 TKIYWPNGLTLDIATRRVYFAD-SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
+ P + +D +Y+ D S++ + Y+T + L +
Sbjct: 2896 PEFKRPRDIAVDWIAGNIYWTDHSRMHWFS----------YYTTHWTSLRY--------- 2936
Query: 294 LKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
I ++G N + L++ E A+A++ + GM+Y WT G++ IE
Sbjct: 2937 -SINVGQLNGPNCTRLLTNMAGEPYAIAVNPKRGMMY-----------WTVVGDHSHIEE 2984
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
MDG+ R ++ + P GL +D ++R+Y+AD +L I +DG+
Sbjct: 2985 AAMDGTLRRILVQKNLQRPTGLAVDQFSQRIYWADFELSIIGSVLFDGS 3033
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 103/275 (37%), Gaps = 49/275 (17%)
Query: 69 QDMNECEQ---PGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
Q N CE G CS MC N S C+C L D TC + FL+ + R
Sbjct: 563 QAPNPCEANEGKGPCSHMCLINHNRSAACACPHLMKLSPDKKTCYEMK---KFLLYARRS 619
Query: 125 SILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
I D++ + V +D V + +D +YW D + I+ NGT
Sbjct: 620 EIRGVDIDNPYFNFITA-FTVPDIDDVTVIDFDASEERLYWTDIKTQTIKRAFINGTGLE 678
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ +I RG+ +D +R L+W + + +I +DGS +++II
Sbjct: 679 TVISRDIQSIRGLAVDWI--SRNLYWISSEFDETQINVARLDGSLKTSII---------- 726
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
+D C + + KLYW D GN I ANMDG
Sbjct: 727 -------------HGIDKPQCLAAH--------PVRGKLYWTD--GN----TINMANMDG 759
Query: 304 SNASILVSGQLYE-ALALDLENGMLYYSTLKCTRW 337
SN+ IL Q +D LY T T W
Sbjct: 760 SNSKILFQNQKDPVGRNVDFFQNSLYLFTSSSTTW 794
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 80/188 (42%), Gaps = 30/188 (15%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN--RIEVCDENGTNRIVLAKDNITQPRGMM 198
+ ++ + + GLA DWI ++YW+ S + +I V +G+ + + I +P+ +
Sbjct: 678 ETVISRDIQSIRGLAVDWISRNLYWISSEFDETQINVARLDGSLKTSIIH-GIDKPQCLA 736
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY-FADS 257
P G L+WTD I MDGSN S I+ P G +D +Y F S
Sbjct: 737 AHPVRGK--LYWTDGNT---INMANMDGSN-SKILFQNQKDPVGRNVDFFQNSLYLFTSS 790
Query: 258 KLDFIDCKSLEIKTNV-------------NYSTIF--RKLYWIDEGGNGVPLKIGK-ANM 301
+ C + ++ Y IF +KL+W D+ ++G +
Sbjct: 791 STTWNICSINGGRQDILETWKEENNYLLKKYPAIFPDKKLWWADQN----LAQLGTCSKR 846
Query: 302 DGSNASIL 309
DG N ++L
Sbjct: 847 DGRNPTVL 854
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 26/157 (16%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD + +L L+WTD E+ RI R +
Sbjct: 306 EIRRIDLHKRDYSLLVPG-LRNTIALDFH----FNQSL-----LYWTDVVED-RIYRGKL 354
Query: 355 DGSNR----STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
S ++ + P GLT+D +Y+ DS LD I+ DGT R LI
Sbjct: 355 SESGGVGAIEVVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGTLR--TTLIAG 412
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
+E A+ALD G+L+++ A F +
Sbjct: 413 AMEHPR---------AIALDPRYGILFWTDWDANFPR 440
>gi|281360959|ref|NP_001162769.1| CG8909, isoform C [Drosophila melanogaster]
gi|209418004|gb|ACI46540.1| IP21864p [Drosophila melanogaster]
gi|272506125|gb|ACZ95304.1| CG8909, isoform C [Drosophila melanogaster]
Length = 2008
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 168/379 (44%), Gaps = 88/379 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGA-LCTCPPGEILSN 63
CV+ +CDG +CP G DE +C C C T G+ C C G ++
Sbjct: 499 CVHQKHICDGHNECPAGEDEADCPKERKCSEP-SPCEQLCIETTAGSNECACRLGYVMDK 557
Query: 64 DSVTCQDMNECE--QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+ V C D++EC+ CSQ C NT GS+ CSC GY+L D +CKA+ + L+ +
Sbjct: 558 NKVNCTDIDECQYLTSPVCSQKCHNTMGSFKCSCETGYILRPDLRSCKALGGAMTLLVAN 617
Query: 122 -----------NRHSILVADLE---------EKG-----------------KDHRAQDIV 144
NR+S +V L KG R +D++
Sbjct: 618 RWDIRRVTLSNNRYSAIVKGLHNAIALDFHHRKGLMFWSDVSTDVIKMVYMNGTRVRDVI 677
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
GL+ G+A DWI ++W DS R+EV + G R V+A ++ +PR +++ PG
Sbjct: 678 KWGLESPGGIAVDWIHDLLFWTDSGTRRVEVSNFQGNLRTVIASYDLDKPRAIVV--HPG 735
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
FW+DWG NP+IER MDG+ R IIS + WPNGL +D ++Y+AD+K I+C
Sbjct: 736 EALAFWSDWGPNPKIERAYMDGTQRKVIISKGVTWPNGLAIDFPNSKIYWADAKQHAIEC 795
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
+N+DGS+ + ++S L AL L
Sbjct: 796 ----------------------------------SNLDGSDRNKILSTHLPHPFALTLFE 821
Query: 325 GMLYYSTLKCTRWLFWTDW 343
+Y WTDW
Sbjct: 822 DTMY-----------WTDW 829
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 141/356 (39%), Gaps = 91/356 (25%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA--------------------------- 110
G CS +C K S C C G L+ D TCK+
Sbjct: 882 GGCSHLCLPNKTSRRCGCPIGLSLKEDGKTCKSTADKLVLVARRKDIRLRHLRDNQADPN 941
Query: 111 ----------INHSAAFLIISNRHSILVADLEEK--GKDH----RAQDIVVSGLDLVEGL 154
+ H+ A S+ I D+E K H Q +V S L GL
Sbjct: 942 DVDMIVPLDNLKHAVALDWCSDTDFIYWTDVERSTINKAHLNGSYQQRVVHSNLVSPVGL 1001
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DWI +YW D NRIEV NG R +L + + +PR ++++P G ++FW+DWG
Sbjct: 1002 ALDWITDKLYWTDPSTNRIEVATTNGKMRTLLIWEKLYKPRDIVVNPIEG--FMFWSDWG 1059
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
++P IER MDG R TI S K+ +PNGL +D ++YF D K+LE
Sbjct: 1060 DDPMIERANMDGHERVTITSKKLIYPNGLAIDYEKSKIYFVDGGT-----KTLE------ 1108
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
N DGS ++++G L LD+ G
Sbjct: 1109 -----------------------NMNFDGSGRQVILNG-LGHPFGLDVNEGR-------- 1136
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 390
+FWTDW + + G + + II+ + RR++ A KL+
Sbjct: 1137 ---VFWTDWDTKSVMSANKLTGKDTNVIIANSTDLMDIRVFHRTRRRIFNACDKLN 1189
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 110/233 (47%), Gaps = 42/233 (18%)
Query: 71 MNECEQ-PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK-------------------- 109
N C++ G CS +C SY C+C G L+ D HTC
Sbjct: 1182 FNACDKLNGGCSHLCLLNPTSYTCACTVGVQLKEDRHTCSEGPTQYILFAHRIDIRQISL 1241
Query: 110 -------------AINHSAAFLIISNRHSILVAD------LEEKGKDHRAQDIVVSGLDL 150
I+++ A + I +D + Q IV L+
Sbjct: 1242 DFDHLIDVVLPLPPISNAVALDVDRKTGYIYWSDTIENVIMSSSPDGLHVQKIVGDSLEN 1301
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
+GL D IG IYW D+ + IEV +G+NR V+A ++ PRG+ LD G LFW
Sbjct: 1302 PDGLVVDSIGRTIYWADAGRHTIEVASLDGSNRHVIAYKDLESPRGLALDYEAGL--LFW 1359
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
TDWG +IER +DG+ RS I++ + WPNGL+LD+ ++R+Y+ D++L ID
Sbjct: 1360 TDWGHYRKIERSHLDGNERSRIVTANLGWPNGLSLDLKSKRIYWVDARLKTID 1412
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 129/267 (48%), Gaps = 33/267 (12%)
Query: 41 SNTCHPTPLGALCTCPPGEILSNDSVT-CQDMNECEQPGYCSQMCTNTKGSYICSCNEGY 99
S+ C P G C CP G L +S T CQ++ E Y + G + S N G
Sbjct: 1499 SHLCLRNPSGYSCQCPIGLRLRQNSTTQCQNLPE----DYL--LIALRSGIGMISLNSGD 1552
Query: 100 VLEYDNHTCKAIN--HSAAFLIISNRHSILV-AD-----LEEKGKDHRAQDIVVSGLDLV 151
++ IN H A L R ++L AD + + + V+ G D++
Sbjct: 1553 FMD----VVLPINGVHGAVVLDYHYRKNLLFFADVNLDVIRRVNLLNLTESKVIVGTDVL 1608
Query: 152 --EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
G+A DWI ++YW D+ IEV +G+ R + +DN+ PR +++ P +LF
Sbjct: 1609 TPNGIAVDWIADNLYWSDTDRKLIEVSRLDGSCRKRIVEDNLGDPRSLIVHPKKA--YLF 1666
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI---DCKS 266
W+DW +IER +DGSNR+ II++ I +P GLT+D RR+ +AD+ D I D
Sbjct: 1667 WSDWSSPAKIERSYLDGSNRTVIITSGIGFPTGLTIDFTNRRLLWADALEDNIGQVDFNG 1726
Query: 267 LEIKTNVNYS------TIFR-KLYWID 286
+T V Y+ T+F ++W D
Sbjct: 1727 KRRQTIVPYAPHPFGLTLFENSIFWTD 1753
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 29/181 (16%)
Query: 242 GLTLDIATRR--VYFADSKLDFIDCKSL----EIKTNVNYST----------IFRKLYWI 285
+ LD R+ ++FAD LD I +L E K V I LYW
Sbjct: 1566 AVVLDYHYRKNLLFFADVNLDVIRRVNLLNLTESKVIVGTDVLTPNGIAVDWIADNLYWS 1625
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
D + + + +DGS +V L + +L + Y LFW+DW
Sbjct: 1626 DTDRKLIEV----SRLDGSCRKRIVEDNLGDPRSLIVHPKKAY---------LFWSDWSS 1672
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+IER +DGSNR+ II++ I +P GLT+D RR+ +AD+ D I +++G RQ +
Sbjct: 1673 PAKIERSYLDGSNRTVIITSGIGFPTGLTIDFTNRRLLWADALEDNIGQVDFNGKRRQTI 1732
Query: 406 I 406
+
Sbjct: 1733 V 1733
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 134/319 (42%), Gaps = 41/319 (12%)
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
H I L GLA D+ IY++D +E + +G+ R V+ + + P G
Sbjct: 1072 HERVTITSKKLIYPNGLAIDYEKSKIYFVDGGTKTLENMNFDGSGRQVIL-NGLGHPFG- 1129
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LD + G +FWTDW + + G + + II+ + RR++ A
Sbjct: 1130 -LDVNEGR--VFWTDWDTKSVMSANKLTGKDTNVIIANSTDLMDIRVFHRTRRRIFNACD 1186
Query: 258 KLDFIDCKSLEIKTNVNYS---TIFRKL----YWIDEG-------GNGVPLKIGKANMDG 303
KL+ C L + +Y+ T+ +L + EG + + ++ + D
Sbjct: 1187 KLNG-GCSHLCLLNPTSYTCACTVGVQLKEDRHTCSEGPTQYILFAHRIDIRQISLDFDH 1245
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+L + A+ALD++ + T +++W+D EN I DG + I+
Sbjct: 1246 LIDVVLPLPPISNAVALDVD---------RKTGYIYWSDTIENV-IMSSSPDGLHVQKIV 1295
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNG 423
+ P+GL +D R +Y+AD+ I+ + DG+ R + DL
Sbjct: 1296 GDSLENPDGLVVDSIGRTIYWADAGRHTIEVASLDGSNRHVIAYKDL-----------ES 1344
Query: 424 VPALALDLENGMLYYSTEG 442
LALD E G+L+++ G
Sbjct: 1345 PRGLALDYEAGLLFWTDWG 1363
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 120/283 (42%), Gaps = 36/283 (12%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
IV + L GL+ D IYW+D+RL I+ CD G R ++ ++ P + L
Sbjct: 1381 IVTANLGWPNGLSLDLKSKRIYWVDARLKTIDSCDYTGNQRKLIMS-SLHHPYALALSDD 1439
Query: 203 PGTRWLFWTDWGENP--RIERIGMDG-----SNRSTIISTKIYW--PNGLTLDIATRRVY 253
++WTDW ER + +N ++ KI + N T+ A
Sbjct: 1440 N----IYWTDWKSKALHMTERRNISAKRDIITNIDGLMDIKIIYQNQNQSTMKNACGNNN 1495
Query: 254 FADSKL-----DFIDCK-SLEIKTNVNYSTIFRKL---YWIDEGGNGVPLKIGKANMDGS 304
S L C+ + ++ N +T + L Y + +G+ + I + D
Sbjct: 1496 GNCSHLCLRNPSGYSCQCPIGLRLRQNSTTQCQNLPEDYLLIALRSGIGM-ISLNSGDFM 1554
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG-MDGSNRSTII 363
+ + ++G ++ A+ LD Y L LF+ D + I R+ ++ + I+
Sbjct: 1555 DVVLPING-VHGAVVLDYH----YRKNL-----LFFADVNLDV-IRRVNLLNLTESKVIV 1603
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
T + PNG+ +D +Y++D+ I+ DG+ R++++
Sbjct: 1604 GTDVLTPNGIAVDWIADNLYWSDTDRKLIEVSRLDGSCRKRIV 1646
>gi|24642347|ref|NP_727914.1| CG8909, isoform B [Drosophila melanogaster]
gi|7293154|gb|AAF48538.1| CG8909, isoform B [Drosophila melanogaster]
Length = 2009
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 168/379 (44%), Gaps = 88/379 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGA-LCTCPPGEILSN 63
CV+ +CDG +CP G DE +C C C T G+ C C G ++
Sbjct: 499 CVHQKHICDGHNECPAGEDEADCPKERKCSEP-SPCEQLCIETTAGSNECACRLGYVMDK 557
Query: 64 DSVTCQDMNECE--QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+ V C D++EC+ CSQ C NT GS+ CSC GY+L D +CKA+ + L+ +
Sbjct: 558 NKVNCTDIDECQYLTSPVCSQKCHNTMGSFKCSCETGYILRPDLRSCKALGGAMTLLVAN 617
Query: 122 -----------NRHSILVADLE---------EKG-----------------KDHRAQDIV 144
NR+S +V L KG R +D++
Sbjct: 618 RWDIRRVTLSNNRYSAIVKGLHNAIALDFHHRKGLMFWSDVSTDVIKMVYMNGTRVRDVI 677
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
GL+ G+A DWI ++W DS R+EV + G R V+A ++ +PR +++ PG
Sbjct: 678 KWGLESPGGIAVDWIHDLLFWTDSGTRRVEVSNFQGNLRTVIASYDLDKPRAIVV--HPG 735
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
FW+DWG NP+IER MDG+ R IIS + WPNGL +D ++Y+AD+K I+C
Sbjct: 736 EALAFWSDWGPNPKIERAYMDGTQRKVIISKGVTWPNGLAIDFPNSKIYWADAKQHAIEC 795
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
+N+DGS+ + ++S L AL L
Sbjct: 796 ----------------------------------SNLDGSDRNKILSTHLPHPFALTLFE 821
Query: 325 GMLYYSTLKCTRWLFWTDW 343
+Y WTDW
Sbjct: 822 DTMY-----------WTDW 829
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 141/356 (39%), Gaps = 91/356 (25%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA--------------------------- 110
G CS +C K S C C G L+ D TCK+
Sbjct: 882 GGCSHLCLPNKTSRRCGCPIGLSLKEDGKTCKSTADKLVLVARRKDIRLRHLRDNQADPN 941
Query: 111 ----------INHSAAFLIISNRHSILVADLEEK--GKDH----RAQDIVVSGLDLVEGL 154
+ H+ A S+ I D+E K H Q +V S L GL
Sbjct: 942 DVDMIVPLDNLKHAVALDWCSDTDFIYWTDVERSTINKAHLNGSYQQRVVHSNLVSPVGL 1001
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DWI +YW D NRIEV NG R +L + + +PR ++++P G ++FW+DWG
Sbjct: 1002 ALDWITDKLYWTDPSTNRIEVATTNGKMRTLLIWEKLYKPRDIVVNPIEG--FMFWSDWG 1059
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
++P IER MDG R TI S K+ +PNGL +D ++YF D K+LE
Sbjct: 1060 DDPMIERANMDGHERVTITSKKLIYPNGLAIDYEKSKIYFVDGGT-----KTLE------ 1108
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
N DGS ++++G L LD+ G
Sbjct: 1109 -----------------------NMNFDGSGRQVILNG-LGHPFGLDVNEGR-------- 1136
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 390
+FWTDW + + G + + II+ + RR++ A KL+
Sbjct: 1137 ---VFWTDWDTKSVMSANKLTGKDTNVIIANSTDLMDIRVFHRTRRRIFNACDKLN 1189
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 110/233 (47%), Gaps = 42/233 (18%)
Query: 71 MNECEQ-PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK-------------------- 109
N C++ G CS +C SY C+C G L+ D HTC
Sbjct: 1182 FNACDKLNGGCSHLCLLNPTSYTCACTVGVQLKEDRHTCSEGPTQYILFAHRIDIRQISL 1241
Query: 110 -------------AINHSAAFLIISNRHSILVAD------LEEKGKDHRAQDIVVSGLDL 150
I+++ A + I +D + Q IV L+
Sbjct: 1242 DFDHLIDVVLPLPPISNAVALDVDRKTGYIYWSDTIENVIMSSSPDGLHVQKIVGDSLEN 1301
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
+GL D IG IYW D+ + IEV +G+NR V+A ++ PRG+ LD G LFW
Sbjct: 1302 PDGLVVDSIGRTIYWADAGRHTIEVASLDGSNRHVIAYKDLESPRGLALDYEAGL--LFW 1359
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
TDWG +IER +DG+ RS I++ + WPNGL+LD+ ++R+Y+ D++L ID
Sbjct: 1360 TDWGHYRKIERSHLDGNERSRIVTANLGWPNGLSLDLKSKRIYWVDARLKTID 1412
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 129/267 (48%), Gaps = 33/267 (12%)
Query: 41 SNTCHPTPLGALCTCPPGEILSNDSVT-CQDMNECEQPGYCSQMCTNTKGSYICSCNEGY 99
S+ C P G C CP G L +S T CQ++ E Y + G + S N G
Sbjct: 1499 SHLCLRNPSGYSCQCPIGLRLRQNSTTQCQNLPE----DYL--LIALRSGIGMISLNSGD 1552
Query: 100 VLEYDNHTCKAIN--HSAAFLIISNRHSILV-AD-----LEEKGKDHRAQDIVVSGLDLV 151
++ IN H A L R ++L AD + + + V+ G D++
Sbjct: 1553 FMD----VVLPINGVHGAVVLDYHYRKNLLFFADVNLDVIRRVNLLNLTESKVIVGTDVL 1608
Query: 152 --EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
G+A DWI ++YW D+ IEV +G+ R + +DN+ PR +++ P +LF
Sbjct: 1609 TPNGIAVDWIADNLYWSDTDRKLIEVSRLDGSCRKRIVEDNLGDPRSLIVHPKKA--YLF 1666
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI---DCKS 266
W+DW +IER +DGSNR+ II++ I +P GLT+D RR+ +AD+ D I D
Sbjct: 1667 WSDWSSPAKIERSYLDGSNRTVIITSGIGFPTGLTIDFTNRRLLWADALEDNIGQVDFNG 1726
Query: 267 LEIKTNVNYS------TIFR-KLYWID 286
+T V Y+ T+F ++W D
Sbjct: 1727 KRRQTIVPYAPHPFGLTLFENSIFWTD 1753
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 29/181 (16%)
Query: 242 GLTLDIATRR--VYFADSKLDFIDCKSL----EIKTNVNYST----------IFRKLYWI 285
+ LD R+ ++FAD LD I +L E K V I LYW
Sbjct: 1566 AVVLDYHYRKNLLFFADVNLDVIRRVNLLNLTESKVIVGTDVLTPNGIAVDWIADNLYWS 1625
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
D + + + +DGS +V L + +L + Y LFW+DW
Sbjct: 1626 DTDRKLIEV----SRLDGSCRKRIVEDNLGDPRSLIVHPKKAY---------LFWSDWSS 1672
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+IER +DGSNR+ II++ I +P GLT+D RR+ +AD+ D I +++G RQ +
Sbjct: 1673 PAKIERSYLDGSNRTVIITSGIGFPTGLTIDFTNRRLLWADALEDNIGQVDFNGKRRQTI 1732
Query: 406 I 406
+
Sbjct: 1733 V 1733
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 134/319 (42%), Gaps = 41/319 (12%)
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
H I L GLA D+ IY++D +E + +G+ R V+ + + P G
Sbjct: 1072 HERVTITSKKLIYPNGLAIDYEKSKIYFVDGGTKTLENMNFDGSGRQVIL-NGLGHPFG- 1129
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LD + G +FWTDW + + G + + II+ + RR++ A
Sbjct: 1130 -LDVNEGR--VFWTDWDTKSVMSANKLTGKDTNVIIANSTDLMDIRVFHRTRRRIFNACD 1186
Query: 258 KLDFIDCKSLEIKTNVNYS---TIFRKL----YWIDEG-------GNGVPLKIGKANMDG 303
KL+ C L + +Y+ T+ +L + EG + + ++ + D
Sbjct: 1187 KLNG-GCSHLCLLNPTSYTCACTVGVQLKEDRHTCSEGPTQYILFAHRIDIRQISLDFDH 1245
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+L + A+ALD++ + T +++W+D EN I DG + I+
Sbjct: 1246 LIDVVLPLPPISNAVALDVD---------RKTGYIYWSDTIENV-IMSSSPDGLHVQKIV 1295
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNG 423
+ P+GL +D R +Y+AD+ I+ + DG+ R + DL
Sbjct: 1296 GDSLENPDGLVVDSIGRTIYWADAGRHTIEVASLDGSNRHVIAYKDL-----------ES 1344
Query: 424 VPALALDLENGMLYYSTEG 442
LALD E G+L+++ G
Sbjct: 1345 PRGLALDYEAGLLFWTDWG 1363
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 120/283 (42%), Gaps = 36/283 (12%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
IV + L GL+ D IYW+D+RL I+ CD G R ++ ++ P + L
Sbjct: 1381 IVTANLGWPNGLSLDLKSKRIYWVDARLKTIDSCDYTGNQRKLIMS-SLHHPYALALSDD 1439
Query: 203 PGTRWLFWTDWGENP--RIERIGMDG-----SNRSTIISTKIYW--PNGLTLDIATRRVY 253
++WTDW ER + +N ++ KI + N T+ A
Sbjct: 1440 N----IYWTDWKSKALHMTERRNISAKRDIITNIDGLMDIKIIYQNQNQSTMKNACGNNN 1495
Query: 254 FADSKL-----DFIDCK-SLEIKTNVNYSTIFRKL---YWIDEGGNGVPLKIGKANMDGS 304
S L C+ + ++ N +T + L Y + +G+ + I + D
Sbjct: 1496 GNCSHLCLRNPSGYSCQCPIGLRLRQNSTTQCQNLPEDYLLIALRSGIGM-ISLNSGDFM 1554
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG-MDGSNRSTII 363
+ + ++G ++ A+ LD Y L LF+ D + I R+ ++ + I+
Sbjct: 1555 DVVLPING-VHGAVVLDYH----YRKNL-----LFFADVNLDV-IRRVNLLNLTESKVIV 1603
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
T + PNG+ +D +Y++D+ I+ DG+ R++++
Sbjct: 1604 GTDVLTPNGIAVDWIADNLYWSDTDRKLIEVSRLDGSCRKRIV 1646
>gi|426221145|ref|XP_004004771.1| PREDICTED: low-density lipoprotein receptor-related protein 1B [Ovis
aries]
Length = 4630
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 183/420 (43%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+G+ DCP+G+DEG CD EC G CSN C P G +C+CP G L
Sbjct: 1182 CLQPEKLCNGRRDCPDGSDEGDLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLGR 1239
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC EG+ L+ D +C +++ AF+I S R
Sbjct: 1240 DNKTCEIVDYCSNHLKCSQVCEQHKQTVKCSCYEGWKLDVDGESCTSVDPFEAFIIFSIR 1299
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1300 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAIE 1359
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 1360 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDP 1419
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 1420 RFGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAR 1477
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG++ ++ G Y +
Sbjct: 1478 SDAI------------YSALY----------------------DGTSMIEIIRGHEYLSH 1503
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 1504 PFAVS---LYGSE------VYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYHPS 1554
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 143/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +CD K DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 2933 RCIPSGALCDNKDDCGDGSDE-RNCHINECLSKKVSGCSQDCQDLPVSYKCKCWPGFQLK 2991
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C +GY ++ DN + CK+++ FLI++
Sbjct: 2992 DDGKTCVDIDECSLGFPCSQQCINTYGTYKCLCTDGYEIQPDNPNGCKSLSDEEPFLILA 3051
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
+ H I L ++G D+R + I
Sbjct: 3052 DHHEIRKISTDGSNYTLLKQGLNNVIGIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDI 3111
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG +L + PR + LDP
Sbjct: 3112 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTILVSKRLKFPRDLSLDPR 3171
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +L+W D E P I R+GMDG+N+S +I TKI P LT+D R+Y+AD
Sbjct: 3172 AG--YLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLYWAD 3223
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 153/318 (48%), Gaps = 65/318 (20%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEG-------PGCDLAECKHKFGLCSNTCHPTPLGALCT 54
A++C++L+++C+G DC +G DEG P C C+HK + N+ +C
Sbjct: 121 ANKCIHLSQLCNGILDCLDGYDEGVHCRELLPNCQQLNCQHKCAMVRNS-------TVCY 173
Query: 55 CPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH- 113
C G + D +C+D +EC G CSQ C NT GSY CSC EGY+++ DN +CKA N
Sbjct: 174 CEDGFEIKEDGRSCKDQDECAIYGTCSQSCINTYGSYACSCVEGYIMQPDNRSCKAKNEP 233
Query: 114 --SAAFLIISNRHSILVADL-------------------------------EEKGKDHRA 140
L+I+N +I + L E + ++
Sbjct: 234 TDKPPLLLIANSETIEIFYLNGSKMATLSSVNGNEIHTLDFIYNEDTICWIESRESSNQL 293
Query: 141 QDI---------------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
+ I ++ V+ +A DW+ ++Y++D +RI VCD NG+ +
Sbjct: 294 KCIQIRKTGRLTDEWTISILQSFHNVQQMAIDWLTRNLYFVDHVSDRIFVCDYNGSVCVT 353
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
L + P+ + +DP G LF+TD+G ++ER MDG NR+ II +K P L L
Sbjct: 354 LIDLELHNPKAIAVDPIAGK--LFFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALAL 411
Query: 246 DIATRRVYFADSKLDFID 263
D+ + VY+ D LD+++
Sbjct: 412 DLVNKWVYWVDLYLDYVE 429
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 126/287 (43%), Gaps = 60/287 (20%)
Query: 69 QDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
Q N C+ G CSQ+C T + + C C GY L+ + +C+ I +FL+ S I
Sbjct: 1865 QGSNSCQLNNGGCSQLCLPTSETTRTCMCTVGYYLQKNRMSCRGIE---SFLMYSVHEGI 1921
Query: 127 LVADLEEKGK----------------DHRAQ-------------------------DIVV 145
LE K D A+ DI+
Sbjct: 1922 RGIPLEPSDKMDALMPISGTSFAVGIDFHAENDTIYWTDMGFNKISRAKRDQTWKEDIIT 1981
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + L P G
Sbjct: 1982 NGLGRVEGIAIDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIALHPEKG- 2040
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+LFWT+WG+ P I + +DGS + ++S I WPNG+++D ++Y+ D++ D I+
Sbjct: 2041 -YLFWTEWGQMPCIGKARLDGSEKVVLVSMGIAWPNGISIDFEENKLYWCDARTDKIERI 2099
Query: 266 SLEIKTN------------VNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
LE N + + +YW D ++ G N
Sbjct: 2100 DLETGGNREMVLSGSNVDMFSVAVFGAYIYWSDRAHANGSIRRGHKN 2146
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 88/158 (55%), Gaps = 13/158 (8%)
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL-DSRLNRI 173
+++ ++ S L+ + G + + I+ LD VEG+A DWIG ++YW D I
Sbjct: 601 TSYIYFADTTSFLIGRQKIDGTER--ETILKDDLDNVEGIAVDWIGNNLYWTNDGHRKTI 658
Query: 174 EVC--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP------RIERIGMD 225
V ++ +R L + ++ PRG+++DP G W++WT W E+ RIE+ MD
Sbjct: 659 NVARLEKASQSRKTLLEGEMSHPRGIVVDPVSG--WMYWTVWEEDEIDDSVGRIEKAWMD 716
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G NR +++K+ WPNGLTLD T +Y+ D+ D I+
Sbjct: 717 GFNRQIFVTSKMLWPNGLTLDFHTHTLYWCDAYYDHIE 754
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 137/328 (41%), Gaps = 74/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSNT--CHPTPLGALCTCPP 57
+C+ + CD DC +G+DE GC + C+ C + C+ C C P
Sbjct: 3804 KCIPMDLQCDQLDDCGDGSDE-QGCRITPSEYTCEDNVNPCGDDAYCNQIKTSVFCRCKP 3862
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G + + C+D+NEC G CS C N +GSY C C++ + + N+TC A
Sbjct: 3863 GFQRNAKNRQCEDLNECLVFGTCSHQCINIEGSYKCVCHQNF--QERNNTCIAKGSEDQV 3920
Query: 118 LIISNRHSIL--------------VADLEEKGK-----DHRAQDIVV------------- 145
L I+N IL ++ +E + + +D+++
Sbjct: 3921 LYIANDTDILGFIYPFNYSGDHQQISHIEHNSRITGMDVYYQRDMIIWSTQFNPGGIFYK 3980
Query: 146 -----------SGLDLVE-----GLAYDWIGGHIYWLD-SRLN--------------RIE 174
SGL E +A DW+ G+IYW D SR++ I
Sbjct: 3981 RIHGREKRQANSGLICPEFRRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSIN 4040
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V +G N L + +P + ++P G ++WT G++ IE MDG+ R ++
Sbjct: 4041 VGQLSGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVVGDHSHIEEAAMDGTLRRILVQ 4098
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D + R+Y+AD +L I
Sbjct: 4099 KNLQRPTGLAVDHFSERIYWADLELSVI 4126
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 127/337 (37%), Gaps = 95/337 (28%)
Query: 77 PGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK 134
PG CS +C +++ + C C G+ L D +CK + R I
Sbjct: 517 PGGCSHICLLSSSYKTRTCRCRTGFNLGSDGRSCKRPKNELFLFYGKGRPGI-------- 568
Query: 135 GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
V G+DL +A +++ + +N+ P
Sbjct: 569 ----------VRGMDLNTKIADEYM--------------------------IPIENLVNP 592
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
R LD T ++++ D + I R +DG+ R TI+ + G+ +D
Sbjct: 593 RA--LDFHAETSYIYFAD-TTSFLIGRQKIDGTERETILKDDLDNVEGIAVDW------- 642
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
I LYW ++G + + + + L+ G++
Sbjct: 643 -----------------------IGNNLYWTNDGHRKT-INVARLEKASQSRKTLLEGEM 678
Query: 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENP------RIERIGMDGSNRSTIISTKIY 368
+ ++ + W++WT W E+ RIE+ MDG NR +++K+
Sbjct: 679 SHPRGIVVD---------PVSGWMYWTVWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKML 729
Query: 369 WPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
WPNGLTLD T +Y+ D+ D I+ +GT R+ V
Sbjct: 730 WPNGLTLDFHTHTLYWCDAYYDHIEKVFLNGTHRKIV 766
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G N ++ST I PNGLT+D ++YF+D L
Sbjct: 2358 ECQNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDHRAEKLYFSDGSLGK 2417
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 2418 IERCEYDGSQRHVIV 2432
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 97/224 (43%), Gaps = 33/224 (14%)
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++D L+WTD + I+R ++G+ T+IS I GLT+D +R +Y+ S
Sbjct: 1642 VIDFDASEERLYWTDI-KTQTIKRAFINGTGLETVISRDIQSIRGLTVDWVSRNLYWISS 1700
Query: 258 KLDFIDCKSLEIKTNVNYSTIF--------------RKLYWIDEGGNGVPLKIGKANMDG 303
+ D + ++ S I KLYW D GN I ANMDG
Sbjct: 1701 EFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD--GN----TINMANMDG 1754
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
SN+ IL Q E + L ++ Y K L+W G N I R +DGSN I
Sbjct: 1755 SNSKILFQNQ-KEPVGLSID-----YVENK----LYWISSG-NGTINRCNLDGSNLEVIE 1803
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+ K L I +++++AD L + C+ GR +L
Sbjct: 1804 TMKEELTKATALTIMDKKLWWADQNLAQLGTCS-KRDGRNPTVL 1846
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 139/310 (44%), Gaps = 39/310 (12%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS MC N S C+C L + TC + FL+ + R I D++
Sbjct: 1570 GPCSHMCLINHNRSAACACPHLMKLSSNKKTCYEMK---KFLLYARRSEIRGVDIDNPYF 1626
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ V +D V + +D +YW D + I+ NGT + +I RG
Sbjct: 1627 NFITA-FTVPDIDDVTVIDFDASEERLYWTDIKTQTIKRAFINGTGLETVISRDIQSIRG 1685
Query: 197 MMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIIS--------------TKIYWPN 241
+ +D +R L+W + + +I +DGS +++II K+YW +
Sbjct: 1686 LTVDWV--SRNLYWISSEFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD 1743
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
G T+++A + ++SK+ F + K + +++Y + KLYWI GNG I + N+
Sbjct: 1744 GNTINMAN--MDGSNSKILFQNQKE-PVGLSIDY--VENKLYWI-SSGNGT---INRCNL 1794
Query: 302 DGSNASIL--VSGQLYEALALDLENGMLYYSTLKCTRWLFWTDW-GENPRIERIGMDGSN 358
DGSN ++ + +L +A AL + + L+++ + + G NP + R +
Sbjct: 1795 DGSNLEVIETMKEELTKATALTIMDKKLWWADQNLAQLGTCSKRDGRNPTVLR-----NK 1849
Query: 359 RSTIISTKIY 368
S ++ K+Y
Sbjct: 1850 TSGVVHMKVY 1859
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 91/240 (37%), Gaps = 54/240 (22%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-----NRIEVCDENGTNR-IVLAKDNITQP 194
+ ++V + VEGLAY +YW S + ++ +R V+A P
Sbjct: 2292 RQVIVENVGSVEGLAYHRAWDTLYWTSSTTSSITRHTVDQTRPGAFDREAVIAMSEDDHP 2351
Query: 195 RGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
+ LD +FWT+W E +P I R + G N ++ST I PNGLT+D ++Y
Sbjct: 2352 HVLALDEC--QNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDHRAEKLY 2409
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
F+D L KI + DGS ++V
Sbjct: 2410 FSDGSLG----------------------------------KIERCEYDGSQRHVIVKSG 2435
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
L+L + + ++FW+DWG + G + + S + P G+
Sbjct: 2436 PGTFLSLAVYDN-----------YIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGI 2484
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 117/341 (34%), Gaps = 71/341 (20%)
Query: 85 TN----------TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK 134
N K S C C G+ N C+ +N F S+
Sbjct: 3840 VNPCGDDAYCNQIKTSVFCRCKPGFQRNAKNRQCEDLNECLVFGTCSH------------ 3887
Query: 135 GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
Q I + G +Y + + R C G+ VL N T
Sbjct: 3888 ------QCINIEG-------SYKCVCHQNF-----QERNNTCIAKGSEDQVLYIANDTDI 3929
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDG-SNRSTIISTKIYWPNGLTLD-IATRRV 252
G + + + N RI GMD R II + + P G+ I R
Sbjct: 3930 LGFIYPFNYSGDHQQISHIEHNSRI--TGMDVYYQRDMIIWSTQFNPGGIFYKRIHGREK 3987
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG-----------NGVPLKIGKANM 301
A+S L C ++ + +YW D + I +
Sbjct: 3988 RQANSGL---ICPEFRRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSINVGQL 4044
Query: 302 DGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNR 359
G N + L++ E A+A++ + GM+Y WT G++ IE MDG+ R
Sbjct: 4045 SGPNCTRLLTNMAGEPYAIAVNPKRGMMY-----------WTVVGDHSHIEEAAMDGTLR 4093
Query: 360 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
++ + P GL +D + R+Y+AD +L I YDG+
Sbjct: 4094 RILVQKNLQRPTGLAVDHFSERIYWADLELSVIGSVLYDGS 4134
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ +V + + GL D +Y+ D L +IE C+ +G+ R V+ K G L
Sbjct: 2385 AQVVVSTDILTPNGLTIDHRAEKLYFSDGSLGKIERCEYDGSQRHVIVKSG----PGTFL 2440
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ ++FW+DWG + G + + S + P G+
Sbjct: 2441 SLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGI 2484
>gi|296204867|ref|XP_002749514.1| PREDICTED: low-density lipoprotein receptor-related protein 1B
[Callithrix jacchus]
Length = 4630
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 183/420 (43%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+GK DC +G+DEG CD EC G CSN C P G +C+CP G L+
Sbjct: 1182 CLQPEKLCNGKKDCADGSDEGDLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLNK 1239
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC EG+ L+ D +C +++ AF+I S R
Sbjct: 1240 DNKTCEIVDYCSNHLKCSQVCEQHKHTVKCSCYEGWKLDVDGESCTSVDPFEAFIIFSIR 1299
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1300 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAIE 1359
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 1360 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDP 1419
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 1420 RYGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAR 1477
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG+N ++ G Y +
Sbjct: 1478 SDAI------------YSALY----------------------DGTNMIEIIRGHEYLSH 1503
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 1504 PFAVS---LYGSD------VYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYHPS 1554
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 143/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +C+ + DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 2934 RCIPSGGLCNNEDDCGDGSDE-RNCHINECLSKKVSGCSQDCQDLPISYKCKCWPGFQLK 2992
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C +GY ++ DN + CK+++ FLI++
Sbjct: 2993 DDGKTCVDIDECSSGFPCSQQCINTYGTYKCLCTDGYEIQPDNPNGCKSLSDEEPFLILA 3052
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
+ H I L ++G D+R + I
Sbjct: 3053 DHHEIRKISTDGSNYTLLKQGLNNVIAIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDI 3112
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG +L + PR + LDP
Sbjct: 3113 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTILVSKRLKFPRDLSLDPQ 3172
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +L+W D E P I R+GMDG+N+S +I TKI P LT+D R+Y+AD
Sbjct: 3173 AG--YLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLYWAD 3224
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 148/312 (47%), Gaps = 55/312 (17%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCD--LAECKHKFGLCSNTCHPTPLGALCTCPPGE 59
++CV+L+++C+G DCP+G DEG C L+ C+ C C C C G
Sbjct: 119 TNKCVHLSQLCNGVFDCPDGYDEGVHCQELLSNCQQLN--CQYKCTMVRNSTRCYCEDGF 176
Query: 60 ILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI---NHSAA 116
+ D +C+D +EC G CSQ CTNT GSY CSC EGY+++ DN +CKA
Sbjct: 177 EIKEDGRSCKDQDECAVYGTCSQTCTNTHGSYTCSCVEGYLMQPDNRSCKAKIEPTDRPP 236
Query: 117 FLIISNRHSILVADL-------------------------------EEKGKDHRAQDI-- 143
L+I N +I V L E + ++ + I
Sbjct: 237 ILLIKNFETIEVFHLNGSKIATLSSVNGNEIHTLDFIYNEDMICWIESRESSNQLKCIQI 296
Query: 144 -------------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ V+ +A DW+ ++Y++D +RI VC+ NG+ + L
Sbjct: 297 TKAGGLTDEWTINILQSFHNVQQMAIDWLTRNLYFVDHVSDRIFVCNYNGSVCVTLIDLE 356
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P+ + +DP G LF+TD+G ++ER MDG NR+ II +K P L LD+ +
Sbjct: 357 LHNPKAIAVDPMAGK--LFFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNK 414
Query: 251 RVYFADSKLDFI 262
VY+ D LD++
Sbjct: 415 LVYWVDLYLDYV 426
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 137/323 (42%), Gaps = 61/323 (18%)
Query: 69 QDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
Q N C+ G CSQ+C T + + C C GY L+ + +C+ + +FL+ S I
Sbjct: 1865 QGSNSCQLNNGGCSQLCLPTSETTRTCMCTVGYYLQKNRMSCQGVE---SFLMYSVHEGI 1921
Query: 127 LVADLEEKGK----------------DHRAQ-------------------------DIVV 145
LE K D A+ DIV
Sbjct: 1922 RGIPLEPSDKMDALMPISGTSFAVGIDFHAENDTIYWTDMGFNKISRAKRDQTWKEDIVT 1981
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + + P G
Sbjct: 1982 NGLGRVEGIAIDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIAVHPEKGL 2041
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
LFWT+WG+ P I + +DGS + ++S I WPNG+++D ++Y+ D++ D I+
Sbjct: 2042 --LFWTEWGQMPCIGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERI 2099
Query: 266 SLEIKTN------------VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
LE N + + +YW D ++ G N D + + +G
Sbjct: 2100 DLETGGNREMVLSGNNVDMFSVAVFGAYIYWSDRAHANGSVRRGHKN-DATETVTMRTGL 2158
Query: 314 LYEALALDLENGMLYYSTLKCTR 336
+ + N + T C R
Sbjct: 2159 GVNLKEVKIFNRVREKGTNICAR 2181
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 138/328 (42%), Gaps = 74/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSNT--CHPTPLGALCTCPP 57
+C+ + CD DC +G+DE GC +A C+ C + C+ C C P
Sbjct: 3805 KCIPMNLQCDRLDDCGDGSDE-QGCRIAPTDYTCEDNVNPCGDDAYCNQIKTSVFCRCKP 3863
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G + + C+D+NEC G CS C N +GSY C C++ + + N+TC A
Sbjct: 3864 GFQRNMKNRKCEDLNECLVFGTCSHQCINVEGSYKCECDQNF--QERNNTCIAKGSEDQV 3921
Query: 118 LIISNRHSIL--------------VADLEEKGK-----DHRAQDIVV------------- 145
L I+N IL ++ +E + + +D+++
Sbjct: 3922 LYIANDTDILGFIYPFNYSGDHQQISHIEHNSRITGMDVYYQRDMIIWSTQFNPGGIFYK 3981
Query: 146 -----------SGLDLVE-----GLAYDWIGGHIYWLD-SRLN--------------RIE 174
SGL E +A DW+ G+IYW D SR++ I
Sbjct: 3982 RIHGREKRQANSGLICPEFKRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSIN 4041
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V NG N L + +P + ++P G ++WT G++ IE MDG+ R ++
Sbjct: 4042 VGQLNGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVVGDHSHIEEAAMDGTLRRILVQ 4099
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
I P GL +D + R+Y+AD +L I
Sbjct: 4100 KNIQRPTGLAVDYFSERIYWADFELSII 4127
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 106/240 (44%), Gaps = 55/240 (22%)
Query: 77 PGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA-DLEE 133
PG CS +C +++ + C C G+ L D +CK + R I+ DL
Sbjct: 515 PGGCSHICLLSSSYKTRTCRCRTGFNLGSDGRSCKRPKNELFLFYGKGRPGIVRGMDLNT 574
Query: 134 KGKDH-----------RAQD------------------------------IVVSGLDLVE 152
K D RA D I+ LD VE
Sbjct: 575 KIADEYMIPIENLVNPRALDFHAETNYIYFADTTSFLIGRQKIDGTERETILKDDLDNVE 634
Query: 153 GLAYDWIGGHIYWL-DSRLNRIEVC--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
G+A DWIG ++YW D I V ++ +R L + ++ PRG+++DP G W++
Sbjct: 635 GIAVDWIGNNLYWTNDGHRKTINVARLEKASQSRKTLLEGEMSHPRGIVVDPVNG--WMY 692
Query: 210 WTDWGENP------RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
WTDW E+ RIE+ MDG NR +++ + WPNGLTLD T +Y+ D+ D I+
Sbjct: 693 WTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSNMLWPNGLTLDFHTNTLYWCDAYYDHIE 752
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G N ++ST I PNGLT+D ++YF+D L
Sbjct: 2359 ECQNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGK 2418
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 2419 IERCEYDGSQRHVIV 2433
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 17/131 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCT 335
+ R LY++D V +I N +GS L+ +L+ +A+A+D G L
Sbjct: 325 LTRNLYFVDH----VSDRIFVCNYNGSVCVTLIDLELHNPKAIAVDPMAGKL-------- 372
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
F+TD+G ++ER MDG NR+ II +K P L LD+ + VY+ D LD++
Sbjct: 373 ---FFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVGVV 429
Query: 396 NYDGTGRQQVI 406
+Y G R +I
Sbjct: 430 DYQGKNRYTII 440
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 141/322 (43%), Gaps = 42/322 (13%)
Query: 69 QDMNECEQ---PGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
Q N CE G CS MC N S C+C L D TC + FL+ +
Sbjct: 1558 QAPNPCEANDGKGPCSHMCLINHNRSAACACPHLMKLSSDKKTCYEMK---KFLLYARHS 1614
Query: 125 SILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
I D++ + V +D V + +D +YW D + I+ NGT
Sbjct: 1615 EIRGVDIDNPYFNFITA-FTVPDIDDVTVIDFDASEERLYWTDIKTQTIKRAFINGTGLE 1673
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIIS--------- 234
+ +I RG+ +D +R L+W + + +I +DGS +++II
Sbjct: 1674 TVISRDIQSIRGLAVDWV--SRNLYWISSEFDETQINVARLDGSLKTSIIHGIDKPQCLA 1731
Query: 235 -----TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
K+YW +G T+++A + ++SK+ F + K + +++Y + KLYWI G
Sbjct: 1732 AHPVRGKLYWTDGNTINMAN--MDGSNSKILFQNQKE-PVGLSIDY--VENKLYWI-SSG 1785
Query: 290 NGVPLKIGKANMDGSNASILVS--GQLYEALALDLENGMLYYSTLKCTRWLFWTDW-GEN 346
NG I + N+DG N ++ S +L +A AL + + L+++ + + G N
Sbjct: 1786 NGT---INRCNLDGGNLEVIESMKEELTKATALTIMDKKLWWADQNLAQLGTCSKRDGRN 1842
Query: 347 PRIERIGMDGSNRSTIISTKIY 368
P I R + S ++ K+Y
Sbjct: 1843 PTILR-----NKTSGVVHMKVY 1859
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 95/224 (42%), Gaps = 33/224 (14%)
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++D L+WTD + I+R ++G+ T+IS I GL +D +R +Y+ S
Sbjct: 1642 VIDFDASEERLYWTDI-KTQTIKRAFINGTGLETVISRDIQSIRGLAVDWVSRNLYWISS 1700
Query: 258 KLDFIDCKSLEIKTNVNYSTIFR--------------KLYWIDEGGNGVPLKIGKANMDG 303
+ D + ++ S I KLYW D GN I ANMDG
Sbjct: 1701 EFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD--GN----TINMANMDG 1754
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
SN+ IL Q E + L ++ Y K L+W G N I R +DG N I
Sbjct: 1755 SNSKILFQNQ-KEPVGLSID-----YVENK----LYWISSG-NGTINRCNLDGGNLEVIE 1803
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
S K L I +++++AD L + C+ GR IL
Sbjct: 1804 SMKEELTKATALTIMDKKLWWADQNLAQLGTCS-KRDGRNPTIL 1846
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 94/242 (38%), Gaps = 58/242 (23%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-----NRIEVCDENGTNR---IVLAKDNIT 192
+ ++V + VEGLAY +YW S + ++ +R I +++D+
Sbjct: 2293 RQVIVENVGSVEGLAYHRAWDTLYWTSSTTSSITRHTVDQTRPGAFDREAVITMSEDD-- 2350
Query: 193 QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
P + LD +FWT+W E +P I R + G N ++ST I PNGLT+D +
Sbjct: 2351 HPHVLALDEC--QNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEK 2408
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+YF+D L KI + DGS ++V
Sbjct: 2409 LYFSDGSLG----------------------------------KIERCEYDGSQRHVIVK 2434
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
L+L + + ++FW+DWG + G + + S + P
Sbjct: 2435 SGPGTFLSLAVYDN-----------YIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPM 2483
Query: 372 GL 373
G+
Sbjct: 2484 GI 2485
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ +V + + GL D+ +Y+ D L +IE C+ +G+ R V+ K G L
Sbjct: 2386 AQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGKIERCEYDGSQRHVIVKSG----PGTFL 2441
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ ++FW+DWG + G + + S + P G+
Sbjct: 2442 SLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGI 2485
>gi|301620806|ref|XP_002939758.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 1-like [Xenopus (Silurana)
tropicalis]
Length = 4607
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/307 (36%), Positives = 154/307 (50%), Gaps = 46/307 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ +CD DC +G+DE C + EC K CS C +G C C PG L +
Sbjct: 2990 CIPDNLLCDNNDDCGDGSDE-LNCFINECLNRKLSGCSQECEDQKIGYKCRCRPGFRLKD 3048
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA--AFLIIS 121
D TC DM+EC CSQ C NT GSY C C EGY +N ++ SA FLI +
Sbjct: 3049 DGKTCVDMDECTTTYPCSQWCLNTLGSYRCLCIEGYEARDNNSNSCKVSASADEPFLIFA 3108
Query: 122 NRH--------------------------------SILVADLEEKGKDHR--------AQ 141
NR+ I D+ +G R Q
Sbjct: 3109 NRYYLRKLSLGGTNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHINGSNVQ 3168
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+ +GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3169 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVNSGLREPRALVVDV 3228
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG+N I +IGMDG+NRS I+ ++I WPNGLTLD R+Y+AD++ D+
Sbjct: 3229 QHG--FLYWTDWGDNSLIGKIGMDGTNRSVIVDSRITWPNGLTLDYVNSRIYWADAREDY 3286
Query: 262 IDCKSLE 268
I +L+
Sbjct: 3287 IQFANLD 3293
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 172/331 (51%), Gaps = 60/331 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ + K+C+G DC +G+DEGP C + A + G C + C T G +C C L
Sbjct: 168 CIPMGKLCNGHHDCSDGSDEGPFCREYAHNCTELG-CQHHCARTVTGPVCYCNTSYQLVE 226
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLII 120
D TC+D +EC G CSQ C N +GSY CSC EGY+L+ DN +CKA N L+I
Sbjct: 227 DGKTCKDFDECTVYGTCSQTCFNMEGSYSCSCVEGYLLQPDNKSCKAKNEPVDRPTILLI 286
Query: 121 SNRHSILVADL------------------------EE----------------------- 133
++ +IL L EE
Sbjct: 287 ASTQNILATYLNGAAVTTIVPTSTKQTTAMDFNYAEETVCWIHMGESPSQTMLNCAKIPN 346
Query: 134 -KG-KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI 191
KG + R+ +I +S L VE +A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 347 LKGFVEERSINISLS-LHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVNLLDREL 405
Query: 192 TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
P+G+ LDP+ G LF+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R
Sbjct: 406 YNPKGIALDPTMGK--LFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRL 463
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
VY+AD+ LD+I+ E K N TI + L
Sbjct: 464 VYWADAYLDYIEVVDYEGK---NRHTIIQGL 491
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 146/304 (48%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G
Sbjct: 1238 CLPPEKLCDGNDDCGDGSDEGDLCD--QCSLNNGGCSHNCTVAPGEGIVCSCPLGMEPGP 1295
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K + CSC EG++LE D +C++++ F+I SNR
Sbjct: 1296 DNKTCQIQSYCAKHLRCSQRCEQEKNTVKCSCYEGWMLEADKESCRSLDPFKPFIIFSNR 1355
Query: 124 HSILVAD------------------------------------------LEEKGKDHRAQ 141
H I D L E G +
Sbjct: 1356 HEIRRIDLNKWDYSVLVPGLRNTIALDFHLNQSTLYWTDVVEDKIYRGKLSESGALTNFE 1415
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
I+ GL EGLA DWI G+IYW++S L++IEV NGT R L +I PR + LDP
Sbjct: 1416 VIIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLNGTMRTTLLAGDIEHPRAIALDP 1475
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIY--WPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G R TI WPNGLT+D R+ + D++
Sbjct: 1476 RNGI--LFWTDWDSSMPRIEAASMSGEGRRTIHKETGSGGWPNGLTVDYLEERILWIDAR 1533
Query: 259 LDFI 262
D I
Sbjct: 1534 SDAI 1537
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 151/320 (47%), Gaps = 63/320 (19%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEG---PGCDLAECKHKFGLCSN--TCHPTPLGALCTCPP 57
++C++ ++ CD DC +G+DE P + C +C C T CTC
Sbjct: 3815 NKCISSSRRCDLFDDCGDGSDEESCYPDLKINGCHGNSTICGEEMKCVHTQTTVYCTCQN 3874
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA------- 110
G S C+D+NEC G CSQ+C NTKGS++C+C + ++ + NH+CKA
Sbjct: 3875 GFQKIPGSNACKDINECLTFGTCSQICNNTKGSHMCTCAKNFI-KSTNHSCKADGSNQVL 3933
Query: 111 -------------INHSAAF-----------------------LIISNRHSILVADLE-- 132
N ++A+ + SN H+ ++ E
Sbjct: 3934 YIADDNEIRSLYPFNPNSAYEQAFRGDENVRIDAMDVYVKGNKIFWSNWHTGKISYRELH 3993
Query: 133 ----------EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
++ D D+ + GL + G+A DW+ G+IYW DS + IEV G +
Sbjct: 3994 STSSTSSNRNKRQIDEGVTDLNIPGLKMPRGIAIDWVAGNIYWTDSGRDVIEVAQMKGEH 4053
Query: 183 RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 242
R L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++ I WP G
Sbjct: 4054 RKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVEDNIQWPTG 4111
Query: 243 LTLDIATRRVYFADSKLDFI 262
L +D R+Y+AD+KL I
Sbjct: 4112 LAVDYYNERLYWADAKLSII 4131
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 176/430 (40%), Gaps = 108/430 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK-- 134
G CSQ+C T + + C C GY L+ TC+ + +FL+ S I L+
Sbjct: 1931 GDCSQLCLPTSETTRSCMCTAGYSLKSGQKTCEGV---GSFLLYSVHEGIRGIPLDPNDK 1987
Query: 135 --------------GKDHRAQ-------------------------DIVVSGLDLVEGLA 155
G D A+ D++ +G+ VEG+A
Sbjct: 1988 SDALVPVSGTSLAVGMDFHAENDTIYWVDMGLSTISRAKRDQTWREDVLTNGIGRVEGIA 2047
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 2048 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2105
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
+PRIER +DGS RS ++ T I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 2106 HPRIERSRLDGSERSILVQTSISWPNGVSIDYEEGKLYWCDARTDKIERIDLETGKNREV 2165
Query: 273 ---------VNYSTIFRKLYWID----------------------EGGNGVPLK----IG 297
+ S +YW D G GV LK
Sbjct: 2166 VLSSNNMDMFSVSVFEDYIYWSDRTHANGSIKRGNKDNATDSVSLRTGIGVQLKDIKVFN 2225
Query: 298 KANMDGSNASILVSGQLYEALALDLEN--------GMLYYSTLKCTRWLFWTDWGENPRI 349
K G+N + +G + N GML + L C + + + E +
Sbjct: 2226 KDRQKGTNICAVNNGGCQQLCLYRGNNNRTCACAHGMLAENGLNCRNYDGYLLYSERTIL 2285
Query: 350 ERIGMDGSNRSTI------ISTKIYWPNGLTLDIATR-------RVYFADSKLDFIDFCN 396
+ I + S+ S++ + N + L R R++++D I N
Sbjct: 2286 KSIHL--SDESSLNAPVKPFEDHEHMKNVIALAFHYRESSQGGIRIFYSDIHFGNIQQIN 2343
Query: 397 YDGTGRQQVI 406
+DGTGR+ V+
Sbjct: 2344 HDGTGRKTVV 2353
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 113/244 (46%), Gaps = 58/244 (23%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI------------- 119
++PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 567 KKPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGRGRPGIIRGMD 625
Query: 120 ----ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLD 149
+ + H I + +L +K + I+ G+
Sbjct: 626 IGAKVQDEHMIPIENLMNPRALDFHAEYGFVYFADTTSYLIGRQKIDGSARETILKEGIH 685
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTR 206
VEG+A DW+G ++YW D + + ++ R + + +T PR +++DP G
Sbjct: 686 NVEGIAVDWMGNNLYWTDDGPKKTISVARLEKASQTRKTIVEGKMTHPRAIVVDPLYG-- 743
Query: 207 WLFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKL 259
W++WTDW E+P +IE+ MDGSNR+ +++K + WPNGL++DI + +Y+ D+
Sbjct: 744 WMYWTDWEEDPKESKRGKIEKAWMDGSNRNVFVTSKTVLWPNGLSIDIPNKILYWVDAFY 803
Query: 260 DFID 263
D I+
Sbjct: 804 DRIE 807
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G N II I PNGL +D + ++YF+D+ LD
Sbjct: 2415 ECQNLMFWTNWNEQHPSIMRATLTGGNVLIIIDKDIRTPNGLAIDHKSEKLYFSDATLDK 2474
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
I+ C YDGT R ++ D + F + G+
Sbjct: 2475 IERCEYDGTKRYSILKTDPVHPFGLAVYGE 2504
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 131/321 (40%), Gaps = 61/321 (19%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C T S+ C+C L D TC + FL+ + + I D++
Sbjct: 1626 GPCSHLCLITYNQSFSCACPHLMKLSPDKKTCLEFRN---FLLYARQMEIRGVDIDNPYY 1682
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V + YD + IYW D R I+ NGT + ++ G
Sbjct: 1683 NYIIS-FTVPDIDNVTVVDYDALEQRIYWSDVRTQTIKRAFINGTGVETVVSADLPNAHG 1741
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIIS--------------TKIYWPN 241
+ +D +R LFWT + N + I +DGS ++ +I K+YW +
Sbjct: 1742 LAVDWV--SRNLFWTSYDANKKQINVARLDGSFKNAVIQGLDKPHCLVVHPLKGKLYWTD 1799
Query: 242 GLTLDIAT-----RRVYFADSK------LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN 290
G + IA +V F + K +DFID KLYWI G +
Sbjct: 1800 GDNISIANMDGNDHKVLFTNQKGPVGLSIDFID----------------NKLYWISSGAS 1843
Query: 291 GVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTRWLFWTDW-GENP 347
I + N++G+ ++ + + Y +A AL + L+++ + G +P
Sbjct: 1844 ----TINRCNLNGTGLEVIGTMKAYLGKATALAIMGNKLWWADHASDKMGTCNKKDGSDP 1899
Query: 348 RIERIGMDGSNRSTIISTKIY 368
R+ R N + ++ K+Y
Sbjct: 1900 RVLR-----QNTNQVMHMKVY 1915
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 11/146 (7%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD---SRLNRIEVCDENG-- 180
I ++++ D + VV + VEGLAY +YW S + R V D++
Sbjct: 2334 IHFGNIQQINHDGTGRKTVVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTV-DQSRLG 2392
Query: 181 --TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKI 237
V+ PR +LD +FWT+W E +P I R + G N II I
Sbjct: 2393 AYDRETVVTMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRATLTGGNVLIIIDKDI 2450
Query: 238 YWPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D + ++YF+D+ LD I+
Sbjct: 2451 RTPNGLAIDHKSEKLYFSDATLDKIE 2476
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 18/173 (10%)
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
+ +IYW + T I +R + + ++ + L + + R L+W N
Sbjct: 1704 LEQRIYWSDVRTQTI--KRAFINGTGVETVVSADLPNAHGLAVDWVSRNLFWTSYDANKK 1761
Query: 293 PLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+ + A +DGS + ++ G LD + ++ + LK L+WTD G+N I
Sbjct: 1762 QINV--ARLDGSFKNAVIQG-------LDKPHCLVVHP-LKGK--LYWTD-GDN--ISIA 1806
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
MDG N ++ T P GL++D ++Y+ S I+ CN +GTG + +
Sbjct: 1807 NMDG-NDHKVLFTNQKGPVGLSIDFIDNKLYWISSGASTINRCNLNGTGLEVI 1858
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 28/150 (18%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + +++ + S+LV G L +ALD L STL +WTD E+ +I R +
Sbjct: 1357 EIRRIDLNKWDYSVLVPG-LRNTIALDFH---LNQSTL------YWTDVVED-KIYRGKL 1405
Query: 355 DGS----NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
S N II + P GL +D +Y+ +S LD I+ +GT R
Sbjct: 1406 SESGALTNFEVIIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLNGTMR-------- 1457
Query: 411 MVEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD NG+L+++
Sbjct: 1458 ----TTLLAGDIEHPRAIALDPRNGILFWT 1483
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ + GLA D +Y+ D+ L++IE C+ +GT R + K + P G+ +
Sbjct: 2445 IIDKDIRTPNGLAIDHKSEKLYFSDATLDKIERCEYDGTKRYSILKTDPVHPFGLAV--- 2501
Query: 203 PGTRWLFWTDW 213
++FWTDW
Sbjct: 2502 -YGEYIFWTDW 2511
>gi|148235080|ref|NP_001081290.1| low-density lipoprotein receptor 1 precursor [Xenopus laevis]
gi|547838|sp|Q99087.1|LDLR1_XENLA RecName: Full=Low-density lipoprotein receptor 1; Short=LDL
receptor 1; Flags: Precursor
gi|214574|gb|AAA49897.1| low density lipoprotein receptor-1 [Xenopus laevis]
Length = 909
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 158/304 (51%), Gaps = 47/304 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + KVC+ K DC + +DE C EC G CS+ C+ +G C C G L
Sbjct: 286 ECITMDKVCNKKRDCRDWSDEPLKECGENECLRNNGGCSHICNDLKIGYECLCNEGYRLV 345
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D+NECE P CSQ+C N G Y C C EGY ++ +CK+I + A+L +N
Sbjct: 346 -DQKRCEDINECENPNTCSQICINLVGGYKCECREGYQMDPVTASCKSIG-TVAYLFFTN 403
Query: 123 RH--------------------SILVADLE---------------------EKGKDHRAQ 141
RH +++ D+E EK +
Sbjct: 404 RHEVRKMTLDRSEYTSVIPRLKNVVALDMEIASNKIYWSDLTQRKIYSASMEKADNTSHH 463
Query: 142 DIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ V+S + +G+A DWI G+IYW DS+ + I V + G+ R D++ +PR +++D
Sbjct: 464 ETVISNQIQAPDGIAVDWIHGNIYWTDSKFSTISVANTEGSKRRTPPSDDLEKPRDIVVD 523
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
PS G +++WTDWG +IE+ G++G +R +++ I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 524 PSQG--FMYWTDWGLPAKIEKGGLNGVDRYPLVTENIEWPNGITLDLINQRLYWVDSKLH 581
Query: 261 FIDC 264
+ C
Sbjct: 582 SLSC 585
>gi|345784251|ref|XP_533343.3| PREDICTED: low-density lipoprotein receptor-related protein 1B [Canis
lupus familiaris]
Length = 4573
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 183/420 (43%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+G+ DCP+G+DEG CD EC G CSN C P G +C+CP G L+
Sbjct: 1124 CLQPEKLCNGRRDCPDGSDEGELCD--ECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLNK 1181
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC EG+ L+ D +C +++ AF+I S R
Sbjct: 1182 DNKTCEIIDYCSNHLKCSQVCEQHKHTVKCSCYEGWKLDVDGESCTSVDPFEAFIIFSIR 1241
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1242 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAIE 1301
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 1302 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDP 1361
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 1362 RYGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAR 1419
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG+ ++ G Y +
Sbjct: 1420 SDAI------------YSALY----------------------DGTAMIEIIRGHEYLSH 1445
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 1446 PFAVS---LYGSE------VYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYHPS 1496
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 143/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +CD K DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 2876 RCIPSGSLCDNKDDCGDGSDE-RNCHINECLSKKVSGCSQDCQDLPVSYKCKCWPGFQLK 2934
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C +GY ++ DN + CK+++ FLI++
Sbjct: 2935 DDGKTCVDIDECSLGFPCSQQCINTYGTYKCLCTDGYEIQPDNPNGCKSLSDEEPFLILA 2994
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
+ H I L ++G D+R + I
Sbjct: 2995 DHHEIRKISTDGSNYTLLKQGLNNVIAIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDI 3054
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG +L + PR + LDP
Sbjct: 3055 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTILVSKRLKFPRDLSLDPR 3114
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +L+W D E P I R+GMDG+N+S +I TKI P LT+D R+Y+AD
Sbjct: 3115 AG--YLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLYWAD 3166
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 150/318 (47%), Gaps = 65/318 (20%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEG-------PGCDLAECKHKFGLCSNTCHPTPLGALCT 54
++CV+L+++C+G DC +G DEG P C L C++K + N+ C
Sbjct: 61 TNKCVHLSQLCNGVMDCSDGYDEGLHCQELLPNCQLLNCQYKCAVVRNS-------TRCY 113
Query: 55 CPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHS 114
C G + D +C+D +EC G CSQ C NT GSY CSC EGY+++ DN +CKA N
Sbjct: 114 CEDGFEVKEDGRSCRDHDECAIYGACSQTCINTHGSYACSCVEGYIMQPDNRSCKAKNEP 173
Query: 115 A---AFLIISNRHSILVADLEEK---------GKDHRAQDI------------------- 143
L+I+N +I V L GK+ D
Sbjct: 174 TDRLPMLLIANSETIEVFYLNGSKMATLSSVNGKEIHTLDFIYNEDMICWIESRESSNQL 233
Query: 144 ------------------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
++ V+ +A DW+ ++Y++D +RI VC+ NG+ +
Sbjct: 234 KCIQITKTGRLIDEWTINILQSFHNVQQMAIDWLTRNLYFVDHVSDRIFVCNYNGSVCVT 293
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
L + P+ + +DP G LF+TD+G ++ER MDG NR+ II +K P L L
Sbjct: 294 LIDLELHNPKAIAVDPIAGK--LFFTDYGNVAKVERCDMDGLNRTRIIDSKTEQPAALAL 351
Query: 246 DIATRRVYFADSKLDFID 263
D+ + VY+ D LD+++
Sbjct: 352 DLVNKLVYWVDLYLDYVE 369
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 126/287 (43%), Gaps = 60/287 (20%)
Query: 69 QDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
Q N C+ G CSQ+C T + + C C GY L+ + +C+ I +FL+ S I
Sbjct: 1807 QGNNSCQLNNGGCSQLCLPTSETTRTCMCTVGYYLQKNRMSCQGIE---SFLMYSVHEGI 1863
Query: 127 LVADLEEKGK----------------DHRAQ-------------------------DIVV 145
LE K D A+ DI+
Sbjct: 1864 RGIPLEPSDKMDALMPISGTSFAVGIDFHAENDTIYWTDMGFNKISRAKRDQTWKEDIIT 1923
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + L P G
Sbjct: 1924 NGLGRVEGIAIDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIALHPEKG- 1982
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+LFWT+WG+ P I + +DGS + ++S I WPNG+++D ++Y+ D++ D I+
Sbjct: 1983 -YLFWTEWGQMPCIGKARLDGSEKVILVSMGIAWPNGISIDYEENKLYWCDARTDKIERI 2041
Query: 266 SLEIKTN------------VNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
LE N + + +YW D ++ G N
Sbjct: 2042 DLETGGNREVVLSGSNVDMFSVAVFGAYIYWSDRAHANGSIRRGHKN 2088
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 107/240 (44%), Gaps = 55/240 (22%)
Query: 77 PGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA-DLEE 133
PG CS +C +++ + C C G+ L D +CK + R I+ DL
Sbjct: 457 PGGCSHICLLSSSYKTRTCRCRTGFNLGSDGRSCKRPKNELFLFYGKGRPGIVRGMDLNT 516
Query: 134 KGKDH-----------RAQD------------------------------IVVSGLDLVE 152
K D RA D I+ LD VE
Sbjct: 517 KIADEYMIPIENLVNPRALDFHAETNYIYFADTTSFLIGRQKIDGTERETILKDDLDNVE 576
Query: 153 GLAYDWIGGHIYWL-DSRLNRIEVC--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
G+A DWIG ++YW D I V ++ +R L + ++ PRG+++DP G W++
Sbjct: 577 GIAVDWIGNNLYWTNDGHRKTINVARLEKASQSRKTLLEGEMSHPRGIVVDPVNG--WMY 634
Query: 210 WTDWGENP------RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
WTDW E+ RIE+ MDG NR +++K+ WPNGLTLD T +Y+ D+ D I+
Sbjct: 635 WTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTNTLYWCDAYYDHIE 694
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 137/328 (41%), Gaps = 74/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSNT--CHPTPLGALCTCPP 57
+C+ + CD DC +G+DE GC + C+ C + C+ C C P
Sbjct: 3747 KCIPMDLQCDQLDDCGDGSDE-QGCRITPAEYTCEDNVNPCGDDAYCNQIKTSVFCRCKP 3805
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G + + C+D+NEC G CS C N +GSY C C++ + + N+TC A
Sbjct: 3806 GFQRNMKNRQCEDLNECLVFGTCSHQCINMEGSYKCVCDQNF--QERNNTCIAKGSEDQV 3863
Query: 118 LIISNRHSIL--------------VADLEEKGK-----DHRAQDIVV------------- 145
L I+N IL ++ +E + + +D+++
Sbjct: 3864 LYIANDTDILGFIYPFNYSGDHQQISHIEHNSRITGMDVYYQRDMIIWSTQFNPGGIFYK 3923
Query: 146 -----------SGLDLVE-----GLAYDWIGGHIYWLD-SRLN--------------RIE 174
SGL E +A DW+ G+IYW D SR++ I
Sbjct: 3924 RIHGREKRQANSGLICPEFKRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSIN 3983
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V NG N L + +P + ++P G ++WT G++ IE MDG+ R ++
Sbjct: 3984 VGQLNGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVVGDHSHIEEAAMDGTLRRILVQ 4041
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D + R+Y+AD +L I
Sbjct: 4042 KNLQRPTGLAVDHFSERIYWADLELSVI 4069
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 17/131 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCT 335
+ R LY++D V +I N +GS L+ +L+ +A+A+D G L
Sbjct: 267 LTRNLYFVDH----VSDRIFVCNYNGSVCVTLIDLELHNPKAIAVDPIAGKL-------- 314
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
F+TD+G ++ER MDG NR+ II +K P L LD+ + VY+ D LD+++
Sbjct: 315 ---FFTDYGNVAKVERCDMDGLNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVEVV 371
Query: 396 NYDGTGRQQVI 406
+Y G R +I
Sbjct: 372 DYQGKNRHTII 382
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G N ++ST I PNGLT+D ++YF+D L
Sbjct: 2301 ECQNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDHRAEKLYFSDGSLGK 2360
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 2361 IERCEYDGSQRHVIV 2375
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 128/333 (38%), Gaps = 59/333 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS MC N S C+C L D TC + FL+ + R I D++
Sbjct: 1512 GPCSHMCLINHNRSAACACPHLMKLSSDKKTCYEMK---KFLLYARRSEIRGVDIDNPYF 1568
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ V +D V + +D +YW D + I+ NGT + +I RG
Sbjct: 1569 NFITA-FTVPDIDDVTVIDFDASEERLYWTDIKTQTIKRAFINGTGLETVISRDIQSIRG 1627
Query: 197 MMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R L+W + + +I +DGS +++II
Sbjct: 1628 LAVDWV--SRNLYWVSSEFDETQINVARLDGSLKTSII---------------------- 1663
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+D C + + KLYW D GN + + ANMDGSN+ IL Q
Sbjct: 1664 -HGIDKPQCLAAH--------PVRGKLYWTD--GNTINM----ANMDGSNSKILFQNQKE 1708
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
L++D LY W G N I R +DG N I S K
Sbjct: 1709 PVGLSIDYVENKLY-----------WISSG-NGTINRCNLDGGNLEVIESMKEELTKATA 1756
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
L I +++++AD L + CN GR +L
Sbjct: 1757 LTIMDKKLWWADQNLAQLGTCN-KRDGRNPTVL 1788
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 158/425 (37%), Gaps = 79/425 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGP-GCDLA----ECKHKFGLCSNT-CHPTPLGA--LCTCP 56
C+ ++C+G DC + +DE G L CK CSN C P L L C
Sbjct: 3703 CLQPEQMCNGIDDCGDNSDEDHCGGKLTYKARPCKKDEFACSNKKCIPMDLQCDQLDDCG 3762
Query: 57 PGE-----ILSNDSVTCQD-MNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110
G ++ TC+D +N C YC+Q+ K S C C G+ N C+
Sbjct: 3763 DGSDEQGCRITPAEYTCEDNVNPCGDDAYCNQI----KTSVFCRCKPGFQRNMKNRQCED 3818
Query: 111 INHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL 170
+N F S+ Q I + G +Y + +
Sbjct: 3819 LNECLVFGTCSH------------------QCINMEG-------SYKCVCDQNF-----Q 3848
Query: 171 NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS-NR 229
R C G+ VL N T G + + + N RI GMD R
Sbjct: 3849 ERNNTCIAKGSEDQVLYIANDTDILGFIYPFNYSGDHQQISHIEHNSRI--TGMDVYYQR 3906
Query: 230 STIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
II + + P G+ I R A+S L C + ++ + +YW D
Sbjct: 3907 DMIIWSTQFNPGGIFYKRIHGREKRQANSGLI---CPEFKRPRDIAVDWVAGNIYWTDHS 3963
Query: 289 G-----------NGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ I ++G N + L++ E A+A++ + GM+Y
Sbjct: 3964 RMHWFSYYTTHWTSLRYSINVGQLNGPNCTRLLTNMAGEPYAIAVNPKRGMMY------- 4016
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WT G++ IE MDG+ R ++ + P GL +D + R+Y+AD +L I
Sbjct: 4017 ----WTVVGDHSHIEEAAMDGTLRRILVQKNLQRPTGLAVDHFSERIYWADLELSVIGSV 4072
Query: 396 NYDGT 400
YDG+
Sbjct: 4073 LYDGS 4077
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 91/240 (37%), Gaps = 54/240 (22%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-----NRIEVCDENGTNR-IVLAKDNITQP 194
+ ++V + VEGLAY +YW S + ++ +R V+A P
Sbjct: 2235 RQVIVENVGSVEGLAYHRAWDTLYWTSSTTSSITRHTVDQTRPGAFDREAVIAMSEDDHP 2294
Query: 195 RGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
+ LD +FWT+W E +P I R + G N ++ST I PNGLT+D ++Y
Sbjct: 2295 HVLALDEC--QNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDHRAEKLY 2352
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
F+D L KI + DGS ++V
Sbjct: 2353 FSDGSLG----------------------------------KIERCEYDGSQRHVIVKSG 2378
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
L+L + + ++FW+DWG + G + + S + P G+
Sbjct: 2379 PGTFLSLAVYDN-----------YIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGI 2427
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ +V + + GL D +Y+ D L +IE C+ +G+ R V+ K G L
Sbjct: 2328 AQVVVSTDILTPNGLTIDHRAEKLYFSDGSLGKIERCEYDGSQRHVIVKSG----PGTFL 2383
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ ++FW+DWG + G + + S + P G+
Sbjct: 2384 SLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGI 2427
>gi|431894797|gb|ELK04590.1| Low-density lipoprotein receptor-related protein 1B [Pteropus alecto]
Length = 3196
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/420 (31%), Positives = 182/420 (43%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+G+ DCP+G+DEG CD EC G CSN C P G +C+CP G L+
Sbjct: 673 CLQPEKLCNGRKDCPDGSDEGDLCD--ECSLNNGGCSNHCTVVPGRGIVCSCPEGLQLNK 730
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC EG+ L+ D +C +++ AF+I S R
Sbjct: 731 DNKTCEIVDYCSSHLKCSQVCEQHKHTVKCSCYEGWKLDIDGESCTSVDSFEAFIIFSIR 790
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 791 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDKIYRGKLSESGGVSAIE 850
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IE +G+ R L + PR + LDP
Sbjct: 851 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEAAKLDGSLRTTLIAGAMEHPRAIALDP 910
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKI--YWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 911 RYGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAR 968
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG+ ++ G Y +
Sbjct: 969 SDAI------------YSALY----------------------DGTGMIEIIRGHEYLSH 994
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 995 PFAVS---LYGSE------VYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYHPS 1045
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 172/382 (45%), Gaps = 86/382 (22%)
Query: 69 QDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
Q N C G CSQ+C T + + C C GY L+ + +C+ I +FL+ S I
Sbjct: 1306 QGSNSCHLNNGGCSQLCLPTSETTRTCMCTVGYYLQKNRMSCQGIE---SFLMYSVHEGI 1362
Query: 127 LVADLEEKGK----------------DHRAQ-------------------------DIVV 145
LE K D A+ DI+
Sbjct: 1363 RGIPLEPSDKMDALMPISGTSFAVGIDFHAENDTIYWTDMGFNKISRAKRDQTWKEDIIT 1422
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + + P G
Sbjct: 1423 NGLGRVEGIAIDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIAVHPEKG- 1481
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+LFWT+WG+ P I + +DGS + +IS I WPNG+++D ++Y+ D++ D I+
Sbjct: 1482 -YLFWTEWGQMPCIGKAHLDGSEKVVLISMGIVWPNGISIDYEENKLYWCDARTDKIERI 1540
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
LE G N +++SG + ++ +
Sbjct: 1541 DLET---------------------------------GGNREMVLSGSNVDMFSVVVFGA 1567
Query: 326 MLYYSTLKCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384
+Y+S +FWT+W E +P I R + G N ++ST I PNGLT+D ++YF
Sbjct: 1568 YIYWS----DSLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDHHAEKLYF 1623
Query: 385 ADSKLDFIDFCNYDGTGRQQVI 406
+D L I+ C YDG+ R ++
Sbjct: 1624 SDGSLGKIERCEYDGSQRHVIV 1645
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 144/303 (47%), Gaps = 53/303 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +CD + DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 2146 RCIPSGGLCDNQDDCGDGSDE-RNCHINECLSKKVSGCSQDCQDLPVSYKCKCWPGFQLK 2204
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
ND TC D++EC CSQ C NT G+Y C C +GY ++ DN + CK+++ FLI++
Sbjct: 2205 NDGKTCVDIDECSSGFPCSQQCINTYGTYKCLCIDGYEIQPDNPNGCKSLSDEEPFLILA 2264
Query: 122 NRHSIL----------------VADLEEKGK--------DHRAQDI-------------- 143
+ H I V + E+G D+R + I
Sbjct: 2265 DHHEIRKISTDGSNYTLLKQSSVYENTERGLNNVIAIDFDYREEFIYWIDSNRPNGSRIN 2324
Query: 144 ----------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
VV + LA DWIG ++YW D+ IEV NG +L +
Sbjct: 2325 RMCLNGSDIKVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTILVSKKLKF 2384
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
PR + LDP G +L+W D E P I R+GMDG+N+S +I TKI P LT+D R+Y
Sbjct: 2385 PRDLSLDPQAG--YLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLY 2442
Query: 254 FAD 256
+AD
Sbjct: 2443 WAD 2445
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 88/156 (56%), Gaps = 13/156 (8%)
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNR---I 173
++ ++ S L+ + G + + I+ LD VEG+A DWIG ++YW + + +
Sbjct: 166 YIYFADTTSFLIGRQKIDGTER--ETILKDDLDNVEGIAVDWIGNNLYWTNDGYRKTINV 223
Query: 174 EVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP------RIERIGMDGS 227
++ +R L + ++ PRG+++DP G W++WTDW E+ RIE+ MDG
Sbjct: 224 ARLEKASQSRKTLLEGEMSHPRGIVVDPVNG--WMYWTDWEEDEIDDSVGRIEKAWMDGF 281
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
NR +++K+ WPNGLTLD + +Y+ D+ D I+
Sbjct: 282 NRQIFVTSKMLWPNGLTLDFHSNTLYWCDAYYDHIE 317
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 128/333 (38%), Gaps = 82/333 (24%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR------------------- 183
I+ S + LA D + +YW+D L+ +EV D G NR
Sbjct: 9 IIDSKTEQPAALALDLVNKLVYWVDLYLDYVEVVDYQGKNRHTIIQGRQVRHLYGITVFE 68
Query: 184 ---IVLAKDNITQPR-----------GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
V DN R + ++ + G R P+ E G R
Sbjct: 69 DYLYVTNSDNFNIIRINRFNGTDIYSLIKMENARGIRIYHKRTQPTGPKNELFLFYGKGR 128
Query: 230 STII-----STKI-----------YWPNGLTLDIATRRVYFADS--------KLDFIDCK 265
I+ +TKI P L T +YFAD+ K+D + +
Sbjct: 129 PGIVRGMDLNTKIADEYMMPIENLVNPRALDFHAETNYIYFADTTSFLIGRQKIDGTERE 188
Query: 266 S-----LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--AL 318
+ L+ + I LYW ++G + + + + L+ G++ +
Sbjct: 189 TILKDDLDNVEGIAVDWIGNNLYWTNDGYRKT-INVARLEKASQSRKTLLEGEMSHPRGI 247
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENP------RIERIGMDGSNRSTIISTKIYWPNG 372
+D NG W++WTDW E+ RIE+ MDG NR +++K+ WPNG
Sbjct: 248 VVDPVNG-----------WMYWTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNG 296
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
LTLD + +Y+ D+ D I+ +GT R+ V
Sbjct: 297 LTLDFHSNTLYWCDAYYDHIEKVFLNGTHRKIV 329
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 125/336 (37%), Gaps = 84/336 (25%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE-------CKHKFGLCSNT-CHPTPLGA--LC 53
C+ + +CDG DC +G+DE CD + CK C+N C P L L
Sbjct: 2720 HCIPIRWLCDGIHDCVDGSDE-ENCDRGKLTYKARPCKKDEFACTNKKCIPVDLQCDQLD 2778
Query: 54 TCPPGE-----ILSNDSVTCQD-MNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT 107
C G ++ TC+D +N C YC+Q+ K S C C G+ N
Sbjct: 2779 DCGDGSDEQGCRITPTEFTCEDNVNPCGDDAYCNQI----KTSVFCRCKPGFQRNMKNRQ 2834
Query: 108 CKA--------------------INHSAAFLIIS-------------------------- 121
C+ N+S IS
Sbjct: 2835 CEGSEDQVLYIANDTDILGFIYPFNYSGDHQQISHIEHNSRITGMDVYYQRDMIIWSTQF 2894
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD-SRLN--------- 171
N I ++ + K ++ +A DW+ G+IYW D SR++
Sbjct: 2895 NPGGIFYKRVQGREKRQANSGLICPEFKRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTHW 2954
Query: 172 -----RIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226
I V NG N L + +P + ++P G ++WT G++ IE MDG
Sbjct: 2955 TNLRYSINVGQLNGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVVGDHSHIEEAAMDG 3012
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ R ++ + P GL +D + R+Y+AD +L I
Sbjct: 3013 TLRRILVQKNLRRPTGLAVDHFSERIYWADLELSLI 3048
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 84/201 (41%), Gaps = 31/201 (15%)
Query: 215 ENPRIERIGMDGS-NRSTIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDCKSLEIKTN 272
N RI GMD R II + + P G+ + R A+S L C + +
Sbjct: 2872 HNSRI--TGMDVYYQRDMIIWSTQFNPGGIFYKRVQGREKRQANSGLI---CPEFKRPRD 2926
Query: 273 VNYSTIFRKLYWIDEGG-----------NGVPLKIGKANMDGSNASILVSGQLYE--ALA 319
+ + +YW D + I ++G N + L++ E A+A
Sbjct: 2927 IAVDWVAGNIYWTDHSRMHWFSYYTTHWTNLRYSINVGQLNGPNCTRLLTNMAGEPYAIA 2986
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
++ + GM+Y WT G++ IE MDG+ R ++ + P GL +D +
Sbjct: 2987 VNPKRGMMY-----------WTVVGDHSHIEEAAMDGTLRRILVQKNLRRPTGLAVDHFS 3035
Query: 380 RRVYFADSKLDFIDFCNYDGT 400
R+Y+AD +L I YDG+
Sbjct: 3036 ERIYWADLELSLIGSVLYDGS 3056
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/360 (20%), Positives = 139/360 (38%), Gaps = 92/360 (25%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN--RIEVCDENGTNRIVLAKDNITQPRGMM 198
+ ++ + + GLA DW+ ++YW+ S + +I V +G+ + + I +P+ +
Sbjct: 1164 ETVISRDIQSIRGLAVDWVSRNLYWISSEFDETQINVARLDGSLKTSIIH-GIDKPQCLA 1222
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI-------ISTKIYWPN---------- 241
+ P G L+WTD I MDGSN + + K++W +
Sbjct: 1223 VHPVRGK--LYWTD---GNTINMANMDGSNSKILFQNQKEPVDKKLWWADQNLAQLGTCS 1277
Query: 242 -----------GLTLDIATRRVYFADSK-------LDFIDCKSLEIKTNVNYSTIFRK-- 281
T + +VY +++ L+ C L + T+ T
Sbjct: 1278 KRDGRNPTVLRNKTSGVVHMKVYDKEAQQGSNSCHLNNGGCSQLCLPTSETTRTCMCTVG 1337
Query: 282 -----------------LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL-- 322
+Y + EG G+PL+ D +A + +SG + A+ +D
Sbjct: 1338 YYLQKNRMSCQGIESFLMYSVHEGIRGIPLEPS----DKMDALMPISGTSF-AVGIDFHA 1392
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
EN +Y WTD G N +I R D + + II+ + G+ +D +
Sbjct: 1393 ENDTIY-----------WTDMGFN-KISRAKRDQTWKEDIITNGLGRVEGIAIDWIAGNI 1440
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
Y+ D + I+ +G+ R +I G + ++A+ E G L+++ G
Sbjct: 1441 YWTDHGFNLIEVARLNGSFRYVII-----------SQGLDQPRSIAVHPEKGYLFWTEWG 1489
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 33/234 (14%)
Query: 224 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT-----------N 272
MDG+NR+ II +K P L LD+ + VY+ D LD+++ + K +
Sbjct: 1 MDGTNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVEVVDYQGKNRHTIIQGRQVRH 60
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+ T+F ++ N ++I + N G++ L+ ++ A + + + +
Sbjct: 61 LYGITVFEDYLYVTNSDNFNIIRINRFN--GTDIYSLI--KMENARGIRIYHKRTQPTGP 116
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRST----IISTKIYWPNGLTLDIATRRVYFADSK 388
K +LF+ P I R GMD + + + + P L T +YFAD+
Sbjct: 117 KNELFLFYGK--GRPGIVR-GMDLNTKIADEYMMPIENLVNPRALDFHAETNYIYFADTT 173
Query: 389 LDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
I DGT R+ ++ DL + V +A+D LY++ +G
Sbjct: 174 SFLIGRQKIDGTERETILKDDL-----------DNVEGIAVDWIGNNLYWTNDG 216
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 92/238 (38%), Gaps = 45/238 (18%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS MC N S C+C L D TC + FL+ + I D++
Sbjct: 1061 GPCSHMCLINHNRSAACACPHLMKLSTDKKTCYEMK---KFLVYARHSEIRGVDIDNPYF 1117
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ V +D V + +D +YW D + I+ NGT + +I RG
Sbjct: 1118 NFITA-FTVPDIDDVTVIDFDASEERLYWTDIKTQTIKRAFINGTGLETVISRDIQSIRG 1176
Query: 197 MMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R L+W + + +I +DGS +++II
Sbjct: 1177 LAVDWV--SRNLYWISSEFDETQINVARLDGSLKTSII---------------------- 1212
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+D C ++ + KLYW D GN I ANMDGSN+ IL Q
Sbjct: 1213 -HGIDKPQCLAVH--------PVRGKLYWTD--GN----TINMANMDGSNSKILFQNQ 1255
>gi|1834534|emb|CAA99509.1| apolipoprotein E receptor 2 906 [Homo sapiens]
Length = 699
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 155/298 (52%), Gaps = 47/298 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 182 CVLAIKHCNQEQDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL 240
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ P CSQ+C N KG + C C G ++ CKA + LI +N
Sbjct: 241 -DQKTCGDIDECKDPDACSQICVNYKGYFKCECYPGCEMDLLTKNCKAAAGKSPSLIFTN 299
Query: 123 RHS-------------------ILVADLE---------------------EKGKDHRAQD 142
R S ++ D+E +K D + ++
Sbjct: 300 RTSAEDRPVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPKERE 359
Query: 143 IVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+++ L EGLA DW+ HIYW DS I V +G R L N+++PR + +DP
Sbjct: 360 VLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRRTLFSRNLSEPRAIAVDP 419
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++W+DWG+ +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 420 LRG--FMYWSDWGDQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 475
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 176/422 (41%), Gaps = 82/422 (19%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGC--DLAECK-HKFGLCSNTC--HPTPLGALCTC 55
+ +CV + CDG+ DC GADE GC L C+ +F TC C
Sbjct: 137 TSHKCVPASWRCDGEKDCEGGADEA-GCATSLGTCRGDEFQCGDGTCVLAIKHCNQEQDC 195
Query: 56 PPGEILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH- 113
P G S+++ Q +NEC G CS +CT+ K + C+C G+ L D TC I+
Sbjct: 196 PDG---SDEAGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGDIDEC 251
Query: 114 ---SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL 170
A I N + + D++ G + I +R
Sbjct: 252 KDPDACSQICVNYKGYFKCECYPGCE----MDLLTKNCKAAAGKSPSLI------FTNRT 301
Query: 171 NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN-- 228
+ + + +R++ N+ + LD T ++W D +I MD ++
Sbjct: 302 SAEDRPVKRNYSRLIPMLKNV-----VALDVEVATNRIYWCDLSYR-KIYSAYMDKASDP 355
Query: 229 --RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWID 286
R +I +++ P GL +D + + +YW D
Sbjct: 356 KEREVLIDEQLHSPEGLAVDW------------------------------VHKHIYWTD 385
Query: 287 EGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWG 344
G + + A +DG L S L E A+A+D G +Y W+DWG
Sbjct: 386 SGNKTISV----ATVDGGRRRTLFSRNLSEPRAIAVDPLRGFMY-----------WSDWG 430
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
+ +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL + ++ G R+
Sbjct: 431 DQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKT 490
Query: 405 VI 406
+I
Sbjct: 491 LI 492
>gi|432095316|gb|ELK26533.1| Low-density lipoprotein receptor-related protein 1B [Myotis
davidii]
Length = 1445
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 180/420 (42%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+G+ DC +G+DEG CD EC G CSN C P G +C+CP G L
Sbjct: 414 CLQPEKLCNGRRDCLDGSDEGDLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLHK 471
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC EG+ L D +C +I+ AF+I S R
Sbjct: 472 DNKTCEIVDYCSNHLKCSQVCEQHKHTVKCSCYEGWKLAVDGESCTSIDPFEAFIIFSIR 531
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 532 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAIE 591
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 592 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDP 651
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 652 RYGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAR 709
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG+ ++ G Y +
Sbjct: 710 SDAI------------YSALY----------------------DGTGMIEIIRGHEYLSH 735
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 736 PFAVS---LYGSE------VYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYHPS 786
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 81/132 (61%), Gaps = 2/132 (1%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+DI+ +GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + L
Sbjct: 1117 EDIITNGLGRVEGIAIDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIALH 1176
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +LFWT+WG+ P I + +DGS + ++S I WPNG+++D ++Y+ D++ D
Sbjct: 1177 PEKG--YLFWTEWGQMPCIGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTD 1234
Query: 261 FIDCKSLEIKTN 272
I+ LE N
Sbjct: 1235 KIERIDLETGGN 1246
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
+A DW+ ++Y++D +RI VC+ NG+ + L + P+ + +DP G LF+TD+
Sbjct: 1 MAIDWLTRNLYFVDHVSDRIFVCNYNGSVCVTLIDLELHNPKAIAVDPIAGK--LFFTDY 58
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G ++ER MDG NR+ II +K P L LD+ + VY+ D LD+++
Sbjct: 59 GNVAKVERCDMDGINRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVE 108
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 48/202 (23%)
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
++WTD G N +I R+ D + + II+ + G+ +D
Sbjct: 1096 IYWTDMGFN-KISRVKRDQTWKEDIITNGLGRVEGIAIDW-------------------- 1134
Query: 268 EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENG 325
I +YW D G N + + A ++GS +++S L + ++AL E G
Sbjct: 1135 ----------IAGNIYWTDHGFNLIEV----ARLNGSFRYVIISQGLDQPRSIALHPEKG 1180
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
+LFWT+WG+ P I + +DGS + ++S I WPNG+++D ++Y+
Sbjct: 1181 -----------YLFWTEWGQMPCIGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWC 1229
Query: 386 DSKLDFIDFCNYDGTGRQQVIL 407
D++ D I+ + + G ++++L
Sbjct: 1230 DARTDKIERIDLETGGNREMVL 1251
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 171/421 (40%), Gaps = 90/421 (21%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS MC N S C+C L D TC + FL+ + R I D++
Sbjct: 802 GPCSHMCLINHSRSAACACPHLMKLSTDKKTCYEMK---KFLLYARRSEIRGVDIDNPYF 858
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ V +D V + +D +YW D + I+ NGT + +I RG
Sbjct: 859 NF-ITAFTVPDIDDVTVIDFDASEERLYWTDIKTQTIKRAFINGTGLETVISRDIQSIRG 917
Query: 197 MMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIIS--------------TKIYWPN 241
+ +D +R L+W + + +I +DGS +++II K+YW +
Sbjct: 918 LAVDWV--SRNLYWISSEFDETQINVARLDGSLKTSIIHGIDKPQCLTAHPVRGKLYWTD 975
Query: 242 GLTLDIAT------------------RRVYFAD---------SKLDFIDCKSLEIKTN-V 273
G T+++A +++++AD SK D + L KT+ V
Sbjct: 976 GNTINMANMDGSNSKILFQNQKEPVDKKLWWADHNLAQLGTCSKRDGRNPTVLRNKTSGV 1035
Query: 274 NYSTIFRK----------LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL- 322
+ ++ K +Y + EG G+PL+ D +A + +SG + A+ +D
Sbjct: 1036 VHMKVYDKAAQQGIESFLMYSVHEGIRGIPLEPS----DKMDALMPISGTSF-AVGIDFH 1090
Query: 323 -ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 381
EN +Y WTD G N +I R+ D + + II+ + G+ +D
Sbjct: 1091 AENDTIY-----------WTDMGFN-KISRVKRDQTWKEDIITNGLGRVEGIAIDWIAGN 1138
Query: 382 VYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTE 441
+Y+ D + I+ +G+ R +I G + ++AL E G L+++
Sbjct: 1139 IYWTDHGFNLIEVARLNGSFRYVII-----------SQGLDQPRSIALHPEKGYLFWTEW 1187
Query: 442 G 442
G
Sbjct: 1188 G 1188
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 67/129 (51%), Gaps = 17/129 (13%)
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTRW 337
R LY++D V +I N +GS L+ +L+ +A+A+D G L
Sbjct: 8 RNLYFVDH----VSDRIFVCNYNGSVCVTLIDLELHNPKAIAVDPIAGKL---------- 53
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
F+TD+G ++ER MDG NR+ II +K P L LD+ + VY+ D LD+++ +Y
Sbjct: 54 -FFTDYGNVAKVERCDMDGINRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVEVVDY 112
Query: 398 DGTGRQQVI 406
G R +I
Sbjct: 113 QGKNRHTII 121
>gi|198456290|ref|XP_002138212.1| GA24641 [Drosophila pseudoobscura pseudoobscura]
gi|198135560|gb|EDY68770.1| GA24641 [Drosophila pseudoobscura pseudoobscura]
Length = 4552
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 149/307 (48%), Gaps = 51/307 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C+++ ++CDGK DC + DEG C C H CS+ CH TP G +C+CP L
Sbjct: 1137 QCISVDQLCDGKNDCEDTTDEGFLCADKLCDHGHE-CSHNCHNTPEGYICSCPDHLFLQP 1195
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
+ C + C+ CSQ+C + Y C C EG+ L YD TCK+ F+I +NR
Sbjct: 1196 NGKRCNMQHACDHWDTCSQVCQTSGKGYDCRCLEGFDLAYDKFTCKSTAPDEPFVIFTNR 1255
Query: 124 HSILVADL-------------------------------------------EEKGKDHRA 140
I +L E G+ R+
Sbjct: 1256 QDIKGINLKTMAVGTFYTSLRNIIALDFLYSNESSVEVYWTDVIDDKIYRGELVGESLRS 1315
Query: 141 QDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+ V+ SGL EGLA DW+G ++YW+DS L++IEV NG+ R L ++ PR + L
Sbjct: 1316 VEAVIHSGLSTTEGLAVDWVGKNLYWIDSNLDQIEVAKLNGSFRRTLIAGSMESPRAIAL 1375
Query: 200 DPSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIST---KIYWPNGLTLDIATRRVYFA 255
DP G LFWTDW +N PRIER M G R I ++ WPNGLTLD +RVY+
Sbjct: 1376 DPREGL--LFWTDWDDNSPRIERASMAGEGRRIISTSWQLSTGWPNGLTLDFTQKRVYWV 1433
Query: 256 DSKLDFI 262
D+K I
Sbjct: 1434 DAKSKSI 1440
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 191/412 (46%), Gaps = 87/412 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EILSN 63
C++ +CD + DC + +DE C++ EC +C + C +G C C PG ++L
Sbjct: 2838 CISADLLCDRRNDCADFSDE-ELCNVNECLIP-DICEHECVDKVVGYECLCRPGYKLLPK 2895
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
C D++EC + CSQ C NT GSY C C +GY L D+HTCKA ++ + LI SNR
Sbjct: 2896 SPHLCTDIDECHEQQPCSQTCVNTYGSYKCICAKGYAL-VDHHTCKATSNVSMELIFSNR 2954
Query: 124 HSILVADLEEKG---------------------------------------KDHRAQDIV 144
+ I ++E G ++R Q +
Sbjct: 2955 YYIRQVNMEGNGTILINELSNAVALDFDWDSQCLYWSDVTSTVGTIKRHCPAENRTQTLH 3014
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ L +GLA DW+ ++YW D L+ IEV +G R VL + + +PRG+ LDP
Sbjct: 3015 QTMLKNPDGLAVDWVAKNLYWCDKGLDTIEVSQLDGKYRKVLISEYLREPRGIALDPY-- 3072
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
R ++W+DWG+NP I + GMDGSN II + WPN LT+ T+++++ D++ D I
Sbjct: 3073 QRHIYWSDWGDNPHIGKAGMDGSNPRMIIRENLGWPNALTISFETQQLFWGDAREDTISV 3132
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
L+ GN L + ++ G N L+ A+ +
Sbjct: 3133 SDLD--------------------GNHTRLLLARSLNPGLN--------LHHIFAIAVWE 3164
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGM-DGSNRSTIISTKIYWPNGLTL 375
G +Y W+DW E IE M G N ST+++T I+ P L +
Sbjct: 3165 GRIY-----------WSDW-ETKSIEYCHMYSGQNCSTLLTT-IHRPMDLRV 3203
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 157/420 (37%), Gaps = 100/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ + CDGK DC +G+DE + C H G GA C ++L +
Sbjct: 2794 HCILKNQTCDGKMDCGDGSDEM----ASLCAHTRGCNGTDDFRCKNGA---CISADLLCD 2846
Query: 64 DSVTCQD--------MNECEQPGYCSQMCTNTKGSYICSCNEGY-VLEYDNHTCK----- 109
C D +NEC P C C + Y C C GY +L H C
Sbjct: 2847 RRNDCADFSDEELCNVNECLIPDICEHECVDKVVGYECLCRPGYKLLPKSPHLCTDIDEC 2906
Query: 110 ---------AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIG 160
+N ++ I + LV K + + +++ S + + +
Sbjct: 2907 HEQQPCSQTCVNTYGSYKCICAKGYALVDHHTCKATSNVSMELIFSNRYYIRQVNMEG-- 2964
Query: 161 GHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIE 220
NGT I + + LD ++ L+W+D
Sbjct: 2965 ------------------NGTILINELSNAVA------LDFDWDSQCLYWSDVTSTVGTI 3000
Query: 221 RIGMDGSNRS-TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIF 279
+ NR+ T+ T + P+GL +D +
Sbjct: 3001 KRHCPAENRTQTLHQTMLKNPDGLAVDW------------------------------VA 3030
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLF 339
+ LYW D+G + + + + +DG +L+S L E + L+ R ++
Sbjct: 3031 KNLYWCDKGLDTIEV----SQLDGKYRKVLISEYLREPRGIALDPYQ---------RHIY 3077
Query: 340 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
W+DWG+NP I + GMDGSN II + WPN LT+ T+++++ D++ D I + DG
Sbjct: 3078 WSDWGDNPHIGKAGMDGSNPRMIIRENLGWPNALTISFETQQLFWGDAREDTISVSDLDG 3137
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 124/303 (40%), Gaps = 82/303 (27%)
Query: 72 NECEQP-GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N CEQ G C Q+C S +C+C + L D +C+ + FL+ S R +I
Sbjct: 2109 NPCEQSNGGCEQLCLYNGTSVVCACAHSH-LAADGLSCEPYEN---FLLFSYRSNIESIH 2164
Query: 131 LEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL-- 186
+ E + ++ S + V + Y++ +Y+ D +L+ I NG+ + VL
Sbjct: 2165 MTEHANKNWPVQLISNTSMMRNVIAITYNYEEQLVYYSDVQLSTINQVHFNGSGQRVLVA 2224
Query: 187 -------------AKDNIT------------QPRGMMLDPSPGTRWLFWTDWGE-NPRIE 220
++ N+ +PRG+ ++P G ++WT+W E +P I+
Sbjct: 2225 QQGRVEGLAYDIHSEQNLQHVKTVLSLQPKDKPRGITVEPCLGM--IYWTNWNEESPSIQ 2282
Query: 221 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFR 280
R + G II T I PN LTLD+ +++Y+AD++LD I+C
Sbjct: 2283 RAYLTGYGTEKIIRTDIKMPNALTLDLEEQKLYWADARLDKIEC---------------- 2326
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFW 340
N DGSN +L A A M Y L LFW
Sbjct: 2327 ------------------TNYDGSNRVVLAHSTPKHAFA------MAVYGDL-----LFW 2357
Query: 341 TDW 343
TDW
Sbjct: 2358 TDW 2360
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 156/375 (41%), Gaps = 68/375 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L++ CDG DC +DE CD + CS C TP G C CP G++ +
Sbjct: 77 ECLELSRFCDGHWDC--DSDE-LQCDKQDAACAAMNCSYNCKLTPRGPRCYCPGGQVPES 133
Query: 64 -DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN---HSAAFLI 119
+S C D +EC++PG C Q+C NT GSY CSC GY + C+AIN A L
Sbjct: 134 LNSTRCVDHDECQEPGTCDQLCRNTPGSYECSCVSGYD-KAKGGRCRAINVPSSEPATLT 192
Query: 120 ISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDEN 179
+ + S+L L+E + A+ GL V L H + + R NR ++
Sbjct: 193 LFSNGSVLHISLQELQANASAEKAAAGGLLSVLTLPQ----AHAFEVWHR-NRTICALQS 247
Query: 180 GTNRIVLAKDNITQPRGMMLDP-----SPGTRWL-FWTDWGENPRIERIGMDGSNRSTII 233
+ + L I +P+ P SP +L DW I
Sbjct: 248 SRDGLWLQCQRIDEPKANWTLPVSPLVSPKQSFLELHLDW-------------------I 288
Query: 234 STKIYWPN---GLTLDIATRRVYFADSKLDFI-DCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+ Y N GL T + F L+ + D +SL + Y +++ D
Sbjct: 289 AGNWYLLNKDHGLVF-FCTNTMLFCRLILEQVRDPESLALDPTKGY------MFYTDRTP 341
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
+ + ++ +DGSN + LVS +Y + LDL N +Y W D E+
Sbjct: 342 S-----LSRSLLDGSNRTALVSTHIYHPNTVTLDLANEHVY-----------WVDVYED- 384
Query: 348 RIERIGMDGSNRSTI 362
IER+ +G R T+
Sbjct: 385 VIERVDYEGQRRWTL 399
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 19/126 (15%)
Query: 296 IGKANMDGSNASILVSGQ-LYEALALDL--ENGMLYYSTL---------------KCTRW 337
I + + +GS +LV+ Q E LA D+ E + + T+ C
Sbjct: 2209 INQVHFNGSGQRVLVAQQGRVEGLAYDIHSEQNLQHVKTVLSLQPKDKPRGITVEPCLGM 2268
Query: 338 LFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
++WT+W E +P I+R + G II T I PN LTLD+ +++Y+AD++LD I+ N
Sbjct: 2269 IYWTNWNEESPSIQRAYLTGYGTEKIIRTDIKMPNALTLDLEEQKLYWADARLDKIECTN 2328
Query: 397 YDGTGR 402
YDG+ R
Sbjct: 2329 YDGSNR 2334
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Query: 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
D + G+A DW+ G+IYW D++ N IEV +G++R V+ N+ +P + +DP G L
Sbjct: 1920 DWLGGIAIDWVAGNIYWSDTKRNLIEVSRLDGSHRYVVVA-NVEKPTVLAVDPLQGL--L 1976
Query: 209 FWTDWGENPRIERIGMDGSNRSTIIS-TKIYWPNG-LTLDIATRRVYFADSKLDFI 262
F+ I R+G+DGS +++ T+ W G L LDI +VY+ + D +
Sbjct: 1977 FYV---TQQHIGRVGLDGSQPFVLVNQTRTNWAVGSLVLDIEATKVYWCEQHPDAL 2029
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ LD + LA DWI +Y +DSR N+I D G I L T P ++L+P
Sbjct: 3827 IPELDDPKSLAVDWITQRVYIIDSRHNKILATDIEGKKYISLVSTG-TNPTDIVLEPE-- 3883
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+R + W+ EN I +DGSN+ +++ + WP L++D T R+Y+AD + I+
Sbjct: 3884 SRIMIWSTL-EN-GILVASLDGSNKKSLVERDVGWPISLSMDYPTGRLYWADYRKGTIE 3940
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 153/413 (37%), Gaps = 101/413 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG--CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + +CDG DC DE L +C+H C N C
Sbjct: 3629 CIRNSALCDGVNDCGTNEDESDQVCAALPKCRHDQFQCEND----------DCISKIFRC 3678
Query: 63 NDSVTCQDMNE---CEQP----GYCSQMCTNTK-GSYICSCNEGYVLEYD-NHTCKAINH 113
+ C D ++ C+ P G CSQ+C K G + C C EGY + N TC A
Sbjct: 3679 DGQYNCIDGSDEINCQPPVCGFGTCSQICIEKKAGHFNCKCAEGYHKGAEKNATCLASGP 3738
Query: 114 SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + + +++G V G + L D
Sbjct: 3739 DQILLLASEQEFRFILPSKQEG-------TTVVGFFQTDSLKIDVF-------------- 3777
Query: 174 EVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
D + +P+ +L FW D S+ +
Sbjct: 3778 ---------------DILIRPKDTLL---------FWID--------------SHHGKVH 3799
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
+ KI P+ ++ A RV +L + L+ ++ I +++Y ID N
Sbjct: 3800 TMKIATPH---VEAAGVRVRRDLKELTAFNIPELDDPKSLAVDWITQRVYIIDSRHN--- 3853
Query: 294 LKIGKANMDGSNASILVS-GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
KI +++G LVS G + L+ E+ ++ +STL EN I
Sbjct: 3854 -KILATDIEGKKYISLVSTGTNPTDIVLEPESRIMIWSTL------------EN-GILVA 3899
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+DGSN+ +++ + WP L++D T R+Y+AD + I+ C +G R V
Sbjct: 3900 SLDGSNKKSLVERDVGWPISLSMDYPTGRLYWADYRKGTIETCRLNGKDRNVV 3952
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
E+LALD G ++F+TD P + R +DGSNR+ ++ST IY PN +TL
Sbjct: 323 ESLALDPTKG-----------YMFYTD--RTPSLSRSLLDGSNRTALVSTHIYHPNTVTL 369
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGR 402
D+A VY+ D D I+ +Y+G R
Sbjct: 370 DLANEHVYWVDVYEDVIERVDYEGQRR 396
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 100/266 (37%), Gaps = 56/266 (21%)
Query: 111 INHSAAFLIISNRHSILVADLEEKGKDHRAQDI-------VVSGLDLVEGLAYDWIGGHI 163
+N A + R + + LEE + Q + + GL+ V +AYDWI H+
Sbjct: 564 VNVRAKSVFYVVRDDLDLGVLEEPSFSIKCQSLNGSVSRSLAHGLERVHSMAYDWINDHL 623
Query: 164 YWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIG 223
YW + ++ V ++++ T+ M +D P T L+WT W + I
Sbjct: 624 YWATNM--KLHVAPLRNMSQVLTFA---TECDAMSIDLDPTTGLLYWTQWSIQTCLAGIY 678
Query: 224 ---MDGSNRSTI----ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
MDG+++ + ++WP L +D +R+Y+ DS I+
Sbjct: 679 SAWMDGTHKELLAKGTTEMPMHWPRSLDVDRRAKRIYWCDSLRGTIE------------- 725
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY-STLKCT 335
+ +DG+ +L+ + ++ N M+Y+ T +
Sbjct: 726 ---------------------RMRLDGTGREVLLKSDQFHPYSMVQHNAMIYWVGTKNSS 764
Query: 336 RWLFWTDWGENPRIERIGMDGSNRST 361
W F G + + + S RS
Sbjct: 765 IWRFHVHHGN--QTSTVHLQSSGRSA 788
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 101/260 (38%), Gaps = 70/260 (26%)
Query: 183 RIVLAKDNITQPRGMM-----------LDPSPGTRWLFWTDWGENPRIERIGMDGSNRST 231
IV D T P+ + +D T L+W D E I R+ DG+ R T
Sbjct: 1848 EIVDPADQPTPPQSALVPISRVSSASFIDYHAATDMLYWGD-NEVGSISRVKRDGTQRET 1906
Query: 232 IIST-------KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYW 284
I+ + W G+ +D +Y++D+K + I+
Sbjct: 1907 ILEAINLAGYKQQDWLGGIAIDWVAGNIYWSDTKRNLIE--------------------- 1945
Query: 285 IDEGGNGVPLKIGKANMDGSNASILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
+ +DGS+ ++V+ + LA+D G+L+Y T +
Sbjct: 1946 -------------VSRLDGSHRYVVVANVEKPTVLAVDPLQGLLFYVTQQ---------- 1982
Query: 344 GENPRIERIGMDGSNRSTIIS-TKIYWPNG-LTLDIATRRVYFADSKLDFIDFCNYDGTG 401
I R+G+DGS +++ T+ W G L LDI +VY+ + D + +YDG
Sbjct: 1983 ----HIGRVGLDGSQPFVLVNQTRTNWAVGSLVLDIEATKVYWCEQHPDALMKVDYDGNL 2038
Query: 402 RQQVILIDLMVEFTNDLMGD 421
R Q++ L MGD
Sbjct: 2039 RLQLLNETLNNPVALAKMGD 2058
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 171/460 (37%), Gaps = 96/460 (20%)
Query: 4 RCVNLTKVCDGKTDCP------NGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT--- 54
RC+ VCDG+ DCP G DEGP C G ++ P LCT
Sbjct: 2698 RCITQKWVCDGERDCPIGSDGQGGEDEGPQC---------GGIAHIPDCPPPAHLCTSGI 2748
Query: 55 CPPGEILSNDSVTC---QDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI 111
C + + + C D E +P Y C G+ + C +G+ + N TC
Sbjct: 2749 CIDSQYVCDGDEDCPGGDDEYEGCEPAYPQHACPG--GTQMHQCQDGHCI-LKNQTCDGK 2805
Query: 112 NHSAAFLIISNRHSILVADLE--EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
S+ + L A D R ++ DL+ D + D
Sbjct: 2806 MDCGDG---SDEMASLCAHTRGCNGTDDFRCKNGACISADLLCDRRNDCAD----FSDEE 2858
Query: 170 LNRI------EVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIG 223
L + ++C+ +++V + + +P +L SP TD E +
Sbjct: 2859 LCNVNECLIPDICEHECVDKVV-GYECLCRPGYKLLPKSPH----LCTDIDECHEQQPCS 2913
Query: 224 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLY 283
N T S K G L +D CK+ +NV+ IF Y
Sbjct: 2914 QTCVN--TYGSYKCICAKGYAL-------------VDHHTCKA---TSNVSMELIFSNRY 2955
Query: 284 WIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
+I + NM+G N +IL++ +L A+ALD + ++ L+W+D
Sbjct: 2956 YIRQ-----------VNMEG-NGTILIN-ELSNAVALDFDWD---------SQCLYWSDV 2993
Query: 344 GENPRIERIGMDGSNRS-TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
+ NR+ T+ T + P+GL +D + +Y+ D LD I+ DG R
Sbjct: 2994 TSTVGTIKRHCPAENRTQTLHQTMLKNPDGLAVDWVAKNLYWCDKGLDTIEVSQLDGKYR 3053
Query: 403 QQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ L+ E+ + G +ALD +Y+S G
Sbjct: 3054 KV-----LISEYLREPRG------IALDPYQRHIYWSDWG 3082
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
+FW+D +N I G+ II+T I P G +D R +YF+ + I C L
Sbjct: 1571 IFWSDIQQN-EISSAGISNGLIEPIINTNIEKPYGFAIDWIARHMYFSSGQ---IRCNIL 1626
Query: 268 EIKTNVNYSTIFR----------------KLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
Y T K+YWI + ++ ++N+DGS ++
Sbjct: 1627 ASNLKGEYVTHIHEDLNMVDSIALDPANGKMYWIHSAPDASLWQLEQSNLDGSGRLLIYE 1686
Query: 312 GQ-LYEALALDLENGMLYYS 330
+ ++L +D + LYY+
Sbjct: 1687 HEHTLQSLTMDFDAQRLYYA 1706
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 25/157 (15%)
Query: 267 LEIKTNVNYSTIFRKLYWIDEGGNGV-PLKIGKANMDGSNASILVSGQLYEALALDLENG 325
LE ++ Y I LYW V PL+ NM + +L +A+++DL+
Sbjct: 608 LERVHSMAYDWINDHLYWATNMKLHVAPLR----NM----SQVLTFATECDAMSIDLD-- 657
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIG---MDGSNRSTI----ISTKIYWPNGLTLDIA 378
T L+WT W + I MDG+++ + ++WP L +D
Sbjct: 658 -------PTTGLLYWTQWSIQTCLAGIYSAWMDGTHKELLAKGTTEMPMHWPRSLDVDRR 710
Query: 379 TRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFT 415
+R+Y+ DS I+ DGTGR+ ++ D ++
Sbjct: 711 AKRIYWCDSLRGTIERMRLDGTGREVLLKSDQFHPYS 747
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 14/102 (13%)
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
+FW+D +N I G+ II+T I P G +D R +YF+ ++
Sbjct: 1571 IFWSDIQQN-EISSAGISNGLIEPIINTNIEKPYGFAIDWIARHMYFSSGQI-------- 1621
Query: 398 DGTGRQQVILIDLMVEFTNDLMGD-NGVPALALDLENGMLYY 438
R ++ +L E+ + D N V ++ALD NG +Y+
Sbjct: 1622 ----RCNILASNLKGEYVTHIHEDLNMVDSIALDPANGKMYW 1659
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 20/114 (17%)
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPNGLTLDIATRRVYFADS 387
T L+W D E I R+ DG+ R TI+ + W G+ +D +Y++D+
Sbjct: 1881 TDMLYWGD-NEVGSISRVKRDGTQRETILEAINLAGYKQQDWLGGIAIDWVAGNIYWSDT 1939
Query: 388 KLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTE 441
K + I+ DG+ R V+ VE LA+D G+L+Y T+
Sbjct: 1940 KRNLIEVSRLDGSHRYVVV---ANVEKPT---------VLAVDPLQGLLFYVTQ 1981
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA-KDNITQPRGMML 199
+ I+ + ++ G A DWI H+Y+ ++ R + N V +++ + L
Sbjct: 1592 EPIINTNIEKPYGFAIDWIARHMYFSSGQI-RCNILASNLKGEYVTHIHEDLNMVDSIAL 1650
Query: 200 DPSPGTRWLFWTDWGENP---RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
DP+ G ++W + ++E+ +DGS R +I + LT+D +R+Y+A
Sbjct: 1651 DPANGK--MYWIHSAPDASLWQLEQSNLDGSGR-LLIYEHEHTLQSLTMDFDAQRLYYA 1706
>gi|148227800|ref|NP_001079111.1| low-density lipoprotein receptor 2 precursor [Xenopus laevis]
gi|547839|sp|Q99088.1|LDLR2_XENLA RecName: Full=Low-density lipoprotein receptor 2; Short=LDL
receptor 2; Flags: Precursor
gi|214578|gb|AAA49898.1| low density lipoprotein receptor-2 [Xenopus laevis]
Length = 892
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 158/303 (52%), Gaps = 47/303 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ + KVC K DC + DE C EC G CS+ C+ +G C C G L
Sbjct: 287 CITMDKVCHKKRDCRDWTDEPIKECGENECLRNNGGCSHICNDLKIGYECLCNEGYRLV- 345
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D C+D+NECE P C+Q+C N G Y C C EGY ++ +CK+I + A+L +NR
Sbjct: 346 DQKRCEDINECENPNTCTQICINLHGGYKCECREGYQMDPVTASCKSIG-TVAYLFFTNR 404
Query: 124 H--------------------SILVADLE---------------------EKGKDHRAQD 142
H +++ D+E +K + +
Sbjct: 405 HEVRKMTLDRSEYTSFIPRLKNVVALDMEIASNKIYWSDLTQRKIYSASMDKADNTSHHE 464
Query: 143 IVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
V+S + +G+A DWI G+IYW DS+ + I V + G+ R L D++ +PR +++DP
Sbjct: 465 TVISNQIQAPDGIAVDWIHGNIYWTDSKFSTISVANTEGSKRKTLFTDDLAKPRDIVVDP 524
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
S G +++WTDWG +IE+ G++G +R +++ I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 525 SQG--FMYWTDWGLPAKIEKGGLNGVDRYPLVTDNIEWPNGITLDLISQRLYWVDSKLHS 582
Query: 262 IDC 264
+ C
Sbjct: 583 LSC 585
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 26/152 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
++ K +D S + + +L +ALD+E + ++W+D + +I M
Sbjct: 406 EVRKMTLDRSEYTSFIP-RLKNVVALDMEIA---------SNKIYWSDLTQR-KIYSASM 454
Query: 355 DG----SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
D S+ T+IS +I P+G+ +D +Y+ DSK I N +G+ R+ +
Sbjct: 455 DKADNTSHHETVISNQIQAPDGIAVDWIHGNIYWTDSKFSTISVANTEGSKRKTL----- 509
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
FT+DL + +D G +Y++ G
Sbjct: 510 ---FTDDLAKPRDI---VVDPSQGFMYWTDWG 535
>gi|297471752|ref|XP_002685444.1| PREDICTED: low-density lipoprotein receptor-related protein 1B,
partial [Bos taurus]
gi|296490549|tpg|DAA32662.1| TPA: low density lipoprotein receptor related protein-deleted in
tumor-like [Bos taurus]
Length = 4375
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 183/420 (43%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+G+ DCP+G+DEG CD EC G CSN C P G +C+CP G L
Sbjct: 1182 CLQPEKLCNGRWDCPDGSDEGDLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLGR 1239
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC EG+ L+ D +C +++ AF+I S R
Sbjct: 1240 DNKTCEIVDYCSNHLKCSQVCEQHKQTVKCSCYEGWKLDVDGQSCSSVDPFEAFIIFSIR 1299
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1300 HEIRKIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAIE 1359
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 1360 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDP 1419
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 1420 RFGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAR 1477
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG++ ++ G Y +
Sbjct: 1478 SDAI------------YSALY----------------------DGTSMIEIIRGHEYLSH 1503
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 1504 PFAVS---LYGSD------VYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYHPS 1554
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 140/555 (25%), Positives = 232/555 (41%), Gaps = 136/555 (24%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEG-------PGCDLAECKHKFGLCSNTCHPTPLGALCT 54
A++C++L+++C+G DC +G DEG P C C+HK + N+ +C
Sbjct: 121 ANKCIHLSQLCNGVLDCLDGYDEGVHCRELLPNCQQLNCQHKCAMVRNS-------TMCY 173
Query: 55 CPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH- 113
C G + D +C+D +EC G CSQ C NT GSY CSC EGY+++ DN +CKA N
Sbjct: 174 CEDGFEIKEDGRSCKDQDECAIYGTCSQSCVNTYGSYACSCVEGYIMQPDNRSCKAKNEP 233
Query: 114 --SAAFLIISNRHSI-------------------------------LVADLEEKGKDHRA 140
L+I+N +I ++ +E + +R
Sbjct: 234 TDKPPLLLIANSETIEIFYLNGSKMATLSSVNGNEIHTLDFIYNEDMICWIESRESSNRL 293
Query: 141 QDI---------------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
+ I ++ V+ +A DW+ ++Y++D +RI VCD NG+ +
Sbjct: 294 KCIQITKTGRLTDEWTISILQSFHNVQQMAIDWLTRNLYFVDHVSDRIFVCDYNGSVCVT 353
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
L + P+ + +DP G LF+TD+G ++ER MDG NR+ II +K P L L
Sbjct: 354 LIDLELHNPKAIAVDPIAGK--LFFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALAL 411
Query: 246 DIATRRVYFADSKLDFIDCKSLEIKT-----------NVNYSTIFRKLYWIDEGGNGVPL 294
D+ + VY+ D LD+++ + K ++ T+F + + N +
Sbjct: 412 DLVNKWVYWVDLYLDYVEVVDYQGKNRHTIIQGRQVKHLYGITVFEDYLYATDADNFNII 471
Query: 295 KIGKANMDGSNASILVSGQLYEALAL-------------------DLENGMLY------- 328
+I + N GS+ L+ + +A+ + + G +
Sbjct: 472 RINRFN--GSDIHSLIKMENAKAIRIYQKRIQPTVRSHACEVDPYGMPGGCSHICLLSSS 529
Query: 329 YSTLKC---TRWLFWTDWG--ENPRIERIGMDGSNRSTII-----STKI----------- 367
Y T C T + +D + P+ E G R I+ +TKI
Sbjct: 530 YKTRTCRCRTGFNLGSDGRSCKRPKNELFLFYGKGRPGIVRGMDLNTKIADEYMIPIENL 589
Query: 368 YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPAL 427
P L T +YFAD+ I DGT R+ ++ DL + V +
Sbjct: 590 VNPRALDFHAETSYIYFADTTSFLIGRQKIDGTERETILKDDL-----------DNVEGI 638
Query: 428 ALDLENGMLYYSTEG 442
A+D LY++ +G
Sbjct: 639 AVDWIGNNLYWTNDG 653
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 142/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +CD K DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 2933 RCIPSGALCDNKDDCGDGSDE-RNCHINECLSKKVSGCSQDCQDLPVSYKCKCWPGFQLK 2991
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C +GY ++ N + CK+++ FLI++
Sbjct: 2992 DDGKTCVDIDECSLGFPCSQQCINTYGTYKCLCTDGYEIQPANPNGCKSLSDEEPFLILA 3051
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
+ H I L ++G D+R + I
Sbjct: 3052 DHHEIRKISTDGSNYTLLKQGLNNVIGIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDI 3111
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG +L + PR + LDP
Sbjct: 3112 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTILVSKRLKFPRDLSLDPR 3171
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +L+W D E P I R+GMDG+N+S +I TKI P LT+D R+Y+AD
Sbjct: 3172 AG--YLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLYWAD 3223
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 126/287 (43%), Gaps = 60/287 (20%)
Query: 69 QDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
Q N C+ G CSQ+C T + + C C GY L+ + +C+ I +FL+ S I
Sbjct: 1865 QGSNSCQLNNGGCSQLCLPTSETTRTCMCTVGYYLQKNRMSCRGIE---SFLMYSVHEGI 1921
Query: 127 LVADLEEKGK----------------DHRAQ-------------------------DIVV 145
LE K D A+ DI+
Sbjct: 1922 RGIPLEPSDKMDALMPISGTSFAVGIDFHAENDTIYWTDMGFNKISRAKRDQTWKEDIIT 1981
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + L P G
Sbjct: 1982 NGLGRVEGIAIDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIALHPEKG- 2040
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+LFWT+WG+ P I + +DGS + ++S I WPNG+++D ++Y+ D++ D I+
Sbjct: 2041 -YLFWTEWGQMPCIGKARLDGSEKVVLVSMGIAWPNGISIDFEENKLYWCDARTDKIERI 2099
Query: 266 SLEIKTN------------VNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
LE N + + +YW D ++ G N
Sbjct: 2100 DLETGGNREMVLSGNNVDMFSVAVFGAYIYWSDRAHANGSIRRGHKN 2146
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 89/158 (56%), Gaps = 13/158 (8%)
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL-DSRLNRI 173
+++ ++ S L+ + G + + I+ LD VEG+A DWIG ++YW D I
Sbjct: 601 TSYIYFADTTSFLIGRQKIDGTER--ETILKDDLDNVEGIAVDWIGNNLYWTNDGHRKTI 658
Query: 174 EVC--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP------RIERIGMD 225
V ++ +R L + ++ PRG+++DP G W++WTDW E+ RIE+ MD
Sbjct: 659 NVARLEKASQSRKTLLEGEMSHPRGIVVDPVSG--WMYWTDWEEDEIDDSVGRIEKAWMD 716
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G NR +++K+ WPNGLTLD T +Y+ D+ D I+
Sbjct: 717 GFNRQIFVTSKMLWPNGLTLDFHTHTLYWCDAYYDHIE 754
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 138/328 (42%), Gaps = 74/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSNT--CHPTPLGALCTCPP 57
+C+ + CD DC +G+DE GC + C+ C + C+ C C P
Sbjct: 3804 KCIPVDLQCDQLDDCGDGSDE-QGCRITPSEYTCEDNVNPCGDDAYCNQIKTSVFCRCKP 3862
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G + + C+D+NEC G CS C NT+GSY C C++ + + N+TC A
Sbjct: 3863 GFQRNMKNRQCEDLNECLVFGTCSHQCINTEGSYKCVCHQNF--QERNNTCIAKGSEDQV 3920
Query: 118 LIISNRHSIL--------------VADLEEKGK-----DHRAQDIVV------------- 145
L I+N IL ++ +E + + +D+++
Sbjct: 3921 LYIANDTDILGFIYPFNYSGDHQQISHIEHNSRITGMDVYYQRDMIIWSTQFNPGGIFYK 3980
Query: 146 -----------SGLDLVE-----GLAYDWIGGHIYWLD-SRLN--------------RIE 174
SGL E +A DW+ G+IYW D SR++ I
Sbjct: 3981 RIPGREKRQANSGLICPEFRRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSIN 4040
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V +G N L + +P + ++P G ++WT G++ IE MDG+ R ++
Sbjct: 4041 VGQLSGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVVGDHSHIEEAAMDGTLRRILVQ 4098
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D + R+Y+AD +L I
Sbjct: 4099 KNLQRPTGLAVDHFSERIYWADLELSVI 4126
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 128/337 (37%), Gaps = 95/337 (28%)
Query: 77 PGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK 134
PG CS +C +++ + C C G+ L D +CK + R I
Sbjct: 517 PGGCSHICLLSSSYKTRTCRCRTGFNLGSDGRSCKRPKNELFLFYGKGRPGI-------- 568
Query: 135 GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
V G+DL +A +++ + +N+ P
Sbjct: 569 ----------VRGMDLNTKIADEYM--------------------------IPIENLVNP 592
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
R LD T ++++ D + I R +DG+ R TI+ + G+ +D
Sbjct: 593 RA--LDFHAETSYIYFAD-TTSFLIGRQKIDGTERETILKDDLDNVEGIAVDW------- 642
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
I LYW ++G + + + + L+ G++
Sbjct: 643 -----------------------IGNNLYWTNDGHRKT-INVARLEKASQSRKTLLEGEM 678
Query: 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENP------RIERIGMDGSNRSTIISTKIY 368
+ ++ + W++WTDW E+ RIE+ MDG NR +++K+
Sbjct: 679 SHPRGIVVD---------PVSGWMYWTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKML 729
Query: 369 WPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
WPNGLTLD T +Y+ D+ D I+ +GT R+ V
Sbjct: 730 WPNGLTLDFHTHTLYWCDAYYDHIEKVFLNGTHRKIV 766
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G N ++ST I PNGLT+D ++YF+D L
Sbjct: 2358 ECQNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDHRAEKLYFSDGSLGK 2417
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 2418 IERCEYDGSQRHVIV 2432
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 97/224 (43%), Gaps = 33/224 (14%)
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++D L+WTD + I+R ++G+ T+IS I GLT+D +R +Y+ S
Sbjct: 1642 VIDFDASEERLYWTDI-KTQTIKRAFINGTGLETVISRDIQSIRGLTVDWVSRNLYWISS 1700
Query: 258 KLDFIDCKSLEIKTNVNYSTIF--------------RKLYWIDEGGNGVPLKIGKANMDG 303
+ D + ++ S I KLYW D GN I ANMDG
Sbjct: 1701 EFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD--GN----TINMANMDG 1754
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
SN+ IL Q E + L ++ Y K L+W G N I R +DGSN I
Sbjct: 1755 SNSKILFQNQ-KEPVGLSID-----YVENK----LYWISSG-NGTINRCNLDGSNLEVIE 1803
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+ K L I +++++AD L + C+ GR +L
Sbjct: 1804 TMKEELTKATALTIMDKKLWWADQNLAQLGTCS-KRDGRNPTVL 1846
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 139/310 (44%), Gaps = 39/310 (12%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS MC N S C+C L + TC + FL+ + R I D++
Sbjct: 1570 GPCSHMCLINHNRSAACACPHLMKLSSNKKTCYEMK---KFLLYARRSEIRGVDIDNPYF 1626
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ V +D V + +D +YW D + I+ NGT + +I RG
Sbjct: 1627 NFITA-FTVPDIDDVTVIDFDASEERLYWTDIKTQTIKRAFINGTGLETVISRDIQSIRG 1685
Query: 197 MMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIIS--------------TKIYWPN 241
+ +D +R L+W + + +I +DGS +++II K+YW +
Sbjct: 1686 LTVDWV--SRNLYWISSEFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD 1743
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
G T+++A + ++SK+ F + K + +++Y + KLYWI GNG I + N+
Sbjct: 1744 GNTINMAN--MDGSNSKILFQNQKE-PVGLSIDY--VENKLYWI-SSGNGT---INRCNL 1794
Query: 302 DGSNASIL--VSGQLYEALALDLENGMLYYSTLKCTRWLFWTDW-GENPRIERIGMDGSN 358
DGSN ++ + +L +A AL + + L+++ + + G NP + R +
Sbjct: 1795 DGSNLEVIETMKEELTKATALTIMDKKLWWADQNLAQLGTCSKRDGRNPTVLR-----NK 1849
Query: 359 RSTIISTKIY 368
S ++ K+Y
Sbjct: 1850 TSGVVHMKVY 1859
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 91/240 (37%), Gaps = 54/240 (22%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-----NRIEVCDENGTNR-IVLAKDNITQP 194
+ ++V + VEGLAY +YW S + ++ +R V+A P
Sbjct: 2292 RQVIVENVGSVEGLAYHRAWDTLYWTSSTTSSITRHTVDQTRPGAFDREAVIAMSEDDHP 2351
Query: 195 RGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
+ LD +FWT+W E +P I R + G N ++ST I PNGLT+D ++Y
Sbjct: 2352 HVLALDECQNL--MFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDHRAEKLY 2409
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
F+D L KI + DGS ++V
Sbjct: 2410 FSDGSLG----------------------------------KIERCEYDGSQRHVIVKSG 2435
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
L+L + + ++FW+DWG + G + + S + P G+
Sbjct: 2436 PGTFLSLAVYDN-----------YIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGI 2484
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ +V + + GL D +Y+ D L +IE C+ +G+ R V+ K G L
Sbjct: 2385 AQVVVSTDILTPNGLTIDHRAEKLYFSDGSLGKIERCEYDGSQRHVIVKSG----PGTFL 2440
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ ++FW+DWG + G + + S + P G+
Sbjct: 2441 SLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGI 2484
>gi|194753139|ref|XP_001958875.1| GF12345 [Drosophila ananassae]
gi|190620173|gb|EDV35697.1| GF12345 [Drosophila ananassae]
Length = 4651
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/307 (35%), Positives = 151/307 (49%), Gaps = 51/307 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C+++ ++CDGK DC + DEG C C+ CS+ CH TP G +C+CP L
Sbjct: 1172 QCISVNQLCDGKNDCEDTTDEGFLCADKLCERDHE-CSHRCHNTPEGYICSCPDHLYLQP 1230
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
+ C + C+ CSQ+C + Y C C EG+ L YD TCK+ ++I +NR
Sbjct: 1231 NGKRCSMQHACDHWDSCSQVCETSGKGYECRCLEGFDLAYDKFTCKSTAPDEPYVIFTNR 1290
Query: 124 HSILVADLE--EKG--------------------------------KDHRAQ-------- 141
I +L+ E G K +R Q
Sbjct: 1291 QDIKGINLKTLEVGNFYTSLRNIIALDFLYINKTSIEIYWTDVIDDKIYRGQLMGESLRN 1350
Query: 142 --DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
++ SGL EGLA DW+G ++YW+DS L++IEV NG+ R L N+ PR + L
Sbjct: 1351 VEAVIHSGLSTTEGLAVDWVGKNLYWIDSNLDQIEVAKLNGSFRRTLIAGNMESPRAIAL 1410
Query: 200 DPSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIST---KIYWPNGLTLDIATRRVYFA 255
DP G LFWTDW +N PRIER M G R I ++ WPNGLTLD +RVY+
Sbjct: 1411 DPREGL--LFWTDWDDNSPRIERASMSGEGRRIISTSWQLSAGWPNGLTLDYTQKRVYWV 1468
Query: 256 DSKLDFI 262
D+K D I
Sbjct: 1469 DAKSDSI 1475
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 189/411 (45%), Gaps = 85/411 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EILSN 63
C+++ +CD + DC + +DE C++ EC + +C + C +G C C PG ++L
Sbjct: 2938 CISVDLLCDRRDDCADYSDE-ELCNVNECLIR-DICEHECEDKVVGYKCHCRPGYKVLPK 2995
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
C D++EC++ CSQ C NT GSY C C +GY L D+HTCKA ++ + LI SNR
Sbjct: 2996 SPHLCTDIDECDEQQPCSQTCINTYGSYKCGCAKGYTL-VDSHTCKATSNISMELIFSNR 3054
Query: 124 HSILVADLEEKG---------------------------------------KDHRAQDIV 144
+ I ++ G K+++ Q +
Sbjct: 3055 YYIRQVNMVGNGTILINELSNAVALDFDWDSQCLYWSDVTSIVGTIKRYCPKENKTQTLH 3114
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ L +GLA DW+ ++YW D L+ IEV +G R VL +N+ +PRG+ LDP
Sbjct: 3115 QNVLKNPDGLAVDWVAKNLYWCDKGLDTIEVSQLDGKYRRVLISENLREPRGIALDPY-- 3172
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
R +FW+DWG+NP I + GMDGSN II + WPN LT+ T+++++ D++ D I
Sbjct: 3173 QRHIFWSDWGDNPHIGKAGMDGSNPRMIIRDGLGWPNALTISFETQQLFWGDAREDTISV 3232
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
LE G L + + SI L+ A+ +
Sbjct: 3233 SDLE--------------------GKHTRLLLAR--------SINPLLNLHHIFAIAVWE 3264
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
G +Y W+DW E IE + G T + T I+ P L +
Sbjct: 3265 GRVY-----------WSDW-ETKSIEYCSIYGDRNCTTLITTIHRPMDLRI 3303
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 136/331 (41%), Gaps = 81/331 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL-SN 63
C+ L++ CDG DC N + CD CS C TP GA C CP G++ S
Sbjct: 104 CLELSRFCDGHWDCDN---DELLCDKQNAACAALNCSYNCKLTPQGARCYCPKGQVTESA 160
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN----------- 112
+S C D +EC +PG C QMC NT GSY CSC GY + +C+AIN
Sbjct: 161 NSTRCVDYDECSEPGICDQMCRNTPGSYECSCVSGYA-KSKGRSCRAINVPPTEAASLTL 219
Query: 113 -HSAAFLIISNRHSILVADLEEKGKD----------------------------HRAQDI 143
H+ I ++ + E K KD HR + +
Sbjct: 220 LHTGGVARIGINGELIDSPAEAKDKDVAANATTDKEVDLFSKHSIISVAAMEVWHRNRTL 279
Query: 144 VV-------------------------------SGLDLVEGLAYDWIGGHIYWLDSRLNR 172
V +GL + L DW+ G+ Y L+
Sbjct: 280 CVLHNNWRDLHLECQRIDDRRVKWTLPISPSIATGLSVFTELRLDWLSGNWYLLNEDNGL 339
Query: 173 IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI 232
+ +C N L + + +DP+ G +LF+TDW P + R DG+NR+ +
Sbjct: 340 VYLC-TNAMTFCRLILQQVDHISSLAVDPTKG--YLFYTDW--KPSLSRSLPDGTNRTVL 394
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
++ +IY P+ +TLD+A VY+ D D I+
Sbjct: 395 VTEQIYHPSSITLDLANELVYWVDIYKDVIE 425
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
S +YW + ++ +R ++K + L+ + + + LYW D+G + +
Sbjct: 3085 SQCLYWSDVTSIVGTIKRYCPKENKTQTLHQNVLKNPDGLAVDWVAKNLYWCDKGLDTIE 3144
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
+ + +DG +L+S L E + L+ R +FW+DWG+NP I + G
Sbjct: 3145 V----SQLDGKYRRVLISENLREPRGIALDPYQ---------RHIFWSDWGDNPHIGKAG 3191
Query: 354 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
MDGSN II + WPN LT+ T+++++ D++ D I + +G + L+
Sbjct: 3192 MDGSNPRMIIRDGLGWPNALTISFETQQLFWGDAREDTISVSDLEGKHTRL-----LLAR 3246
Query: 414 FTNDLMGDNGVPALALDLENGMLYYS 439
N L+ + + A+A + G +Y+S
Sbjct: 3247 SINPLLNLHHIFAIA--VWEGRVYWS 3270
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 94/215 (43%), Gaps = 58/215 (26%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWL---DSRLNRIE------VCDENGTN-RIVLAKD 189
Q +++ + VEGLAYD + ++W ++ + +E V D N + VL
Sbjct: 2293 GQRVLLGQQERVEGLAYDIVNEQLFWTSNNNAAIRSVELRHLDLVSDWNHKQVKNVLKLR 2352
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248
+PRG+ ++P G ++WT+W E P I+R + G +II T I PN LTLD+
Sbjct: 2353 EKDKPRGIAVEPCLGM--IYWTNWNEEAPCIQRAFLTGYGVESIIKTDIKMPNALTLDLE 2410
Query: 249 TRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
+++Y+AD++LD KI +AN DGS+ +
Sbjct: 2411 QQKLYWADARLD----------------------------------KIERANYDGSHRVV 2436
Query: 309 LVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L A A M Y L LFWTDW
Sbjct: 2437 LAHSTPKHAFA------MAVYGDL-----LFWTDW 2460
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 146/352 (41%), Gaps = 70/352 (19%)
Query: 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
D + G+A DW+ G+IYW D++ N IEV +G++R V+ N+ +P + +DP G L
Sbjct: 1995 DWLGGIAIDWVAGNIYWSDTKRNLIEVARLDGSHRYVVVS-NVDKPTALAVDPLQGM--L 2051
Query: 209 FWTDWGENPRIERIGMDGSNRSTIIS-TKIYWPNG-LTLDIATRRVYFADSKLDFI---- 262
F+ I R+G+DGS +++ T+ W G L LDI +VY+ + D +
Sbjct: 2052 FYV---TQQHIGRVGLDGSQPFILVNQTRANWAVGSLVLDIEATKVYWCERYPDALMKVD 2108
Query: 263 ---DCKSLEIKTNVNYSTIFRK----LYWIDEGGNGVPLKIGK-ANMD------------ 302
+ + + +N K LYW + N +K+ AN+
Sbjct: 2109 YDGNLREQLLNETLNNPVALAKMGDYLYWAENKYNEGTIKVAPLANLSQSKVVLQTEQDA 2168
Query: 303 -------------GSNASILVSGQLYEALALD-------LENGMLYYSTLKCTRWLFWTD 342
GSN +G + + + L C + +
Sbjct: 2169 IRDLKIYSKHIQRGSNPCATANGGCEQLCLFNGTTAICACAHSRLSADGTSCEPYENFLL 2228
Query: 343 WGENPRIERIGM-DGSNRS---TIISTKIYWPN--GLTLDIATRRVYFADSKLDFIDFCN 396
+ IE I M D SN++ +IS N ++ + + VY++D +L I+ +
Sbjct: 2229 FSYRSNIESIHMTDHSNKNWPVQMISNSTLMRNVIAISYNYEEQLVYYSDVQLSTINQVH 2288
Query: 397 YDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKT 448
++GTG++ ++ VE LA D+ N L++++ +++
Sbjct: 2289 FNGTGQRVLLGQQERVE------------GLAYDIVNEQLFWTSNNNAAIRS 2328
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 128/327 (39%), Gaps = 85/327 (25%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G C Q+C + IC+C L D +C+ + F SN SI + D K+
Sbjct: 2191 GGCEQLCLFNGTTAICACAHSR-LSADGTSCEPYENFLLFSYRSNIESIHMTD--HSNKN 2247
Query: 138 HRAQDIVVSGL-DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
Q I S L V ++Y++ +Y+ D +L+ I NGT
Sbjct: 2248 WPVQMISNSTLMRNVIAISYNYEEQLVYYSDVQLSTINQVHFNGT--------------- 2292
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G R L G+ R+E + D I++ +++W + I +
Sbjct: 2293 -------GQRVLL----GQQERVEGLAYD------IVNEQLFWTSNNNAAIRS------- 2328
Query: 257 SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE 316
++ + L++ ++ N+ Q+
Sbjct: 2329 -----VELRHLDLVSDWNHK------------------------------------QVKN 2347
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTL 375
L L ++ + C ++WT+W E P I+R + G +II T I PN LTL
Sbjct: 2348 VLKLREKDKPRGIAVEPCLGMIYWTNWNEEAPCIQRAFLTGYGVESIIKTDIKMPNALTL 2407
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGR 402
D+ +++Y+AD++LD I+ NYDG+ R
Sbjct: 2408 DLEQQKLYWADARLDKIERANYDGSHR 2434
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ LD + LA DWI +Y +DSR N+I V D G I L + P ++L+P
Sbjct: 3927 IPELDDPKSLAVDWITQRVYIIDSRHNQIVVTDIEGKKYISLVSTGLN-PTDIVLEPE-- 3983
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+R + W+ EN I +DGSN+ +++ + WP L++D T R+Y+AD + I+
Sbjct: 3984 SRIMIWSTL-EN-GILVASLDGSNKKSLVERDVGWPISLSMDYPTGRLYWADYRKGTIE 4040
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 90/229 (39%), Gaps = 50/229 (21%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+V+ L LV LA+DWI H+YW R +I+V +R VL+ + R M LDP+
Sbjct: 639 ILVTNLTLVHSLAFDWINEHLYWSIHR--KIQVAPLQNISR-VLSFNVDCDARSMALDPT 695
Query: 203 PGT-RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP--NGLTLDIATRRVYFADSKL 259
G W WT I MDG+++ + P +LD+ +R
Sbjct: 696 TGLFYWTQWTSLNCEGGIYSAWMDGTHKELLAKGTTALPMRAPRSLDVDSRS-------- 747
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
++LYW D G I +DG+ +L + +
Sbjct: 748 --------------------KRLYWCDVGLG----TIEHMKLDGTGREVLFKSNQFRIFS 783
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY 368
+ NG++Y W D N I R + G+N + +S+ ++
Sbjct: 784 MVQHNGLIY-----------WVD-DRNATIWRFPLHGANINNTVSSTVH 820
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 152/413 (36%), Gaps = 101/413 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG--CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV + +CDG DC + DE L +C+H C N C
Sbjct: 3729 CVRNSALCDGVDDCGDNEDESEKVCAALPKCRHDQFQCEND----------DCISKIFRC 3778
Query: 63 NDSVTCQDMNE---CEQP----GYCSQMCTNTK-GSYICSCNEGYVLEYD-NHTCKAINH 113
+ C D ++ C+ P G CSQ+C K G Y C C +GY + N TC A
Sbjct: 3779 DGQYNCIDGSDEMNCQPPVCGFGSCSQICIEKKMGHYNCKCADGYHKGPEKNATCLASGP 3838
Query: 114 SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + + +++G V G + L D
Sbjct: 3839 DQILLLASEQEFRFILPAKQEG-------TTVVGFFQTDSLKIDVF-------------- 3877
Query: 174 EVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
D + +P+ +L FW D S+ +
Sbjct: 3878 ---------------DILIRPKDTLL---------FWID--------------SHHGKVH 3899
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
+ KI P+ + RR +L + L+ ++ I +++Y ID N
Sbjct: 3900 TMKIATPHVEETGLRVRRDL---KELTAFNIPELDDPKSLAVDWITQRVYIIDSRHN--- 3953
Query: 294 LKIGKANMDGSNASILVSGQLYEA-LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+I +++G LVS L + L+ E+ ++ +STL EN I
Sbjct: 3954 -QIVVTDIEGKKYISLVSTGLNPTDIVLEPESRIMIWSTL------------EN-GILVA 3999
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+DGSN+ +++ + WP L++D T R+Y+AD + I+ C +G R V
Sbjct: 4000 SLDGSNKKSLVERDVGWPISLSMDYPTGRLYWADYRKGTIETCRLNGKDRNVV 4052
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 102/459 (22%), Positives = 161/459 (35%), Gaps = 103/459 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLA-ECKHKFGLCSNTCHPTPLGALC---------- 53
C+ + CD K DCP+ +DE C+ A +C C + H P LC
Sbjct: 18 CIPMRWKCDSKADCPDRSDETSECEKAPKCNEGQFRCKQSRHCIPENWLCDGEYDCGKGD 77
Query: 54 -----TCPPGEI---------------------------LSNDSVTCQDMNECEQPGYCS 81
CP G ND + C N CS
Sbjct: 78 TSDETNCPNGAAPKCRAFEIECRNGDCLELSRFCDGHWDCDNDELLCDKQNAACAALNCS 137
Query: 82 QMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLII---------SNRHSILVADL 131
C T C C +G V E N T C + + I S S +
Sbjct: 138 YNCKLTPQGARCYCPKGQVTESANSTRCVDYDECSEPGICDQMCRNTPGSYECSCVSGYA 197
Query: 132 EEKGKDHRAQDIV---VSGLDLVE--GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV- 185
+ KG+ RA ++ + L L+ G+A I G + + +V T++ V
Sbjct: 198 KSKGRSCRAINVPPTEAASLTLLHTGGVARIGINGELIDSPAEAKDKDVAANATTDKEVD 257
Query: 186 -LAKDNITQPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGL 243
+K +I M + T + +W + + +RI ++ W +
Sbjct: 258 LFSKHSIISVAAMEVWHRNRTLCVLHNNWRDLHLECQRID----------DRRVKWTLPI 307
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
+ IAT F + +LD++ Y ++E V L
Sbjct: 308 SPSIATGLSVFTELRLDWLS----------------GNWYLLNEDNGLVYLCTNAMTF-- 349
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
IL +LA+D G +LF+TDW P + R DG+NR+ ++
Sbjct: 350 -CRLILQQVDHISSLAVDPTKG-----------YLFYTDW--KPSLSRSLPDGTNRTVLV 395
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
+ +IY P+ +TLD+A VY+ D D I+ Y+G R
Sbjct: 396 TEQIYHPSSITLDLANELVYWVDIYKDVIERVTYEGQNR 434
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 97/233 (41%), Gaps = 59/233 (25%)
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
+FW+D +N I G+ II+T I P G LD R +YF+ S
Sbjct: 1646 IFWSDIQQN-EISSAGISNGLIEPIINTNIEKPYGFALDWIGRNMYFS----------SG 1694
Query: 268 EIKTNVNYSTIFRKLY-WIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGM 326
+IK N+ S + + +I E N + +++ALD NG
Sbjct: 1695 QIKCNILASNLKGEFVTYIHENLN-----------------------MVDSIALDPANGK 1731
Query: 327 LYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 386
++ W+ T G ++E+ +DGS R I + LT+D ++R+Y+A
Sbjct: 1732 MF--------WIHSTSDGNLSQLEQSNLDGSGRVLIYEHESSL-QSLTMDFDSQRLYYA- 1781
Query: 387 SKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPAL-ALDLENGMLYY 438
YDG+G + D+ T ++ + + ++ +L + NG +Y+
Sbjct: 1782 ----------YDGSG---IAYYDIPRNETRKVLVASQITSISSLTVYNGTIYF 1821
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 112/285 (39%), Gaps = 31/285 (10%)
Query: 72 NECEQP--GYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILV 128
N C P G C +C T + ++C C GY +E +N F I + +
Sbjct: 1865 NSCAGPLRGGCEHLCLATSATEHVCRCALGYDMEPNNPARCVPRAEFIFYSIDVLQGVEM 1924
Query: 129 ADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
D E+ A + +S + + Y +YW D+ L I +GT R +L
Sbjct: 1925 IDPAEQFAPPPAALVPISRVSSASFVDYFAATDTLYWGDNELGSISRVKRDGTQRETILE 1984
Query: 188 KDNITQPR------GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
N+ + G+ +D G ++W+D N IE +DGS+R ++S + P
Sbjct: 1985 AINVAGYKQQDWLGGIAIDWVAGN--IYWSDTKRN-LIEVARLDGSHRYVVVSN-VDKPT 2040
Query: 242 GLTLDIATRRVYFADSK------LDFIDCKSLEIKTNVNYST-------IFRKLYWIDEG 288
L +D +++ + LD L +T N++ K+YW +
Sbjct: 2041 ALAVDPLQGMLFYVTQQHIGRVGLDGSQPFILVNQTRANWAVGSLVLDIEATKVYWCER- 2099
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
P + K + DG+ L++ L +AL LY++ K
Sbjct: 2100 ---YPDALMKVDYDGNLREQLLNETLNNPVALAKMGDYLYWAENK 2141
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 143/364 (39%), Gaps = 86/364 (23%)
Query: 144 VVSGLDLVEGLAYDWIGGHIYWL----DSRLNRIEVCDENGTNRIVL-AKDNITQPRGMM 198
+ L++V+ +A D G ++W+ D L+++E + +G+ R+++ ++ Q M
Sbjct: 1713 IHENLNMVDSIALDPANGKMFWIHSTSDGNLSQLEQSNLDGSGRVLIYEHESSLQSLTMD 1772
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
D ++ L++ G I + R +++++I + LT+ T +YF ++
Sbjct: 1773 FD----SQRLYYAYDGSGIAYYDIPRN-ETRKVLVASQITSISSLTVYNGT--IYFPENI 1825
Query: 259 LDFIDCKSLEIKTNVNYSTI------FRKLYWIDE--GGNGV--PLKIGKAN-------- 300
I E +N++Y + K+++ D G N PL+ G +
Sbjct: 1826 QSVIMQCEKESCSNMSYLRVNTKTIQSMKMFYADAQTGTNSCAGPLRGGCEHLCLATSAT 1885
Query: 301 -----------MDGSNASILVSGQLYEALALDLENGM----------------------- 326
M+ +N + V + ++D+ G+
Sbjct: 1886 EHVCRCALGYDMEPNNPARCVPRAEFIFYSIDVLQGVEMIDPAEQFAPPPAALVPISRVS 1945
Query: 327 --LYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPNGLTLDI 377
+ T L+W D E I R+ DG+ R TI+ + W G+ +D
Sbjct: 1946 SASFVDYFAATDTLYWGD-NELGSISRVKRDGTQRETILEAINVAGYKQQDWLGGIAIDW 2004
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLY 437
+Y++D+K + I+ DG+ R V+ + ALA+D GML+
Sbjct: 2005 VAGNIYWSDTKRNLIEVARLDGSHRYVVV------------SNVDKPTALAVDPLQGMLF 2052
Query: 438 YSTE 441
Y T+
Sbjct: 2053 YVTQ 2056
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ I+ + ++ G A DWIG ++Y+ ++ + + +N+ + LD
Sbjct: 1667 EPIINTNIEKPYGFALDWIGRNMYFSSGQIKCNILASNLKGEFVTYIHENLNMVDSIALD 1726
Query: 201 PSPGTR-WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
P+ G W+ T G ++E+ +DGS R I + LT+D ++R+Y+A
Sbjct: 1727 PANGKMFWIHSTSDGNLSQLEQSNLDGSGRVLIYEHESSL-QSLTMDFDSQRLYYA 1781
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 22/124 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALC----TCPPGEI 60
C+ + CDGK+DC +G DEGP C C+ C ++ P +C CP G+
Sbjct: 2760 CIPASFQCDGKSDCEDGTDEGPQCPSRPCRPHLFQCKSSGRCIPQKWVCDGEKDCPGGDE 2819
Query: 61 LSNDS----VTCQDMNECEQPGY-CSQ-MCTNTKGSYICSCN----------EGYVLEYD 104
S D T + +C P + CS +C +++ Y+C + EG V Y
Sbjct: 2820 GSEDEGPQCGTVAHIPDCPPPAHLCSSGLCIDSQ--YVCDGDEDCPGGDDEYEGCVPVYP 2877
Query: 105 NHTC 108
H C
Sbjct: 2878 PHAC 2881
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 72/180 (40%), Gaps = 36/180 (20%)
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL---YEALALDL 322
+L + ++ + I LYW + KI A + N S ++S + ++ALD
Sbjct: 643 NLTLVHSLAFDWINEHLYW------SIHRKIQVAPL--QNISRVLSFNVDCDARSMALDP 694
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI----ISTKIYWPNGLTLDIA 378
G+ Y W WT I MDG+++ + + + P L +D
Sbjct: 695 TTGLFY--------WTQWTSLNCEGGIYSAWMDGTHKELLAKGTTALPMRAPRSLDVDSR 746
Query: 379 TRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYY 438
++R+Y+ D L I+ DGTGR+ L N ++ NG++Y+
Sbjct: 747 SKRLYWCDVGLGTIEHMKLDGTGREV-------------LFKSNQFRIFSMVQHNGLIYW 793
>gi|334329873|ref|XP_001370906.2| PREDICTED: low-density lipoprotein receptor-related protein 1B
[Monodelphis domestica]
Length = 4578
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 183/420 (43%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+G+ DC +G+DEG CD EC G CSN C P G +C+CP G L+
Sbjct: 1129 CLQPEKLCNGRRDCSDGSDEGDLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPTGLQLNP 1186
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C + CSQ+C K S CSC EG+ L+ D +C +I+ AF+I S R
Sbjct: 1187 DNKTCEIVDYCSKHLKCSQVCEQHKHSVKCSCYEGWKLDMDGESCTSIDPFEAFIIFSIR 1246
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1247 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVGAIE 1306
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +GT R L + PR + LDP
Sbjct: 1307 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGTLRTTLIAGAMEHPRAIALDP 1366
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 1367 RYGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAR 1424
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG+ ++ G Y +
Sbjct: 1425 SDAI------------YSALY----------------------DGTGMIEIIRGHEYLSH 1450
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 1451 PFAVS---LYGSE------VYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYHPS 1501
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 144/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +CD K DC +G+DE C + EC K CS C P+G C C PG L
Sbjct: 2881 RCIPSGGLCDSKDDCGDGSDE-RNCHINECLSKKVSGCSQDCQDLPVGYKCKCWPGFQLK 2939
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
+D TC DM+EC CSQ C NT G+Y C C +GY ++ DN T CK+++ FLI++
Sbjct: 2940 DDGKTCVDMDECSSGFPCSQQCINTYGTYKCLCTDGYEIQPDNPTGCKSLSDEEPFLILA 2999
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
+ H I L ++G D+R + I
Sbjct: 3000 DHHEIRKISTDGSNYTLLKQGLNNVIAIDFDYREEFIYWIDSSRPNGSRINRMYLNGSDI 3059
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG +L + PR + LDP
Sbjct: 3060 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTILVSKRLRFPRDISLDPR 3119
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +L+W D E P I R+GMDG+++S +I TKI P LT+D R+Y+AD
Sbjct: 3120 AG--YLYWIDCCEYPHIGRVGMDGTDQSVVIETKISRPMALTIDYVNSRLYWAD 3171
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 154/315 (48%), Gaps = 65/315 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-------PGCDLAECKHKFGLCSNTCHPTPLGALCTCPP 57
C++L+++C+G DC +G DEG P C C++K + N G C C
Sbjct: 69 CIHLSQLCNGVFDCSDGYDEGVHCRELLPNCQQMNCQYKCAITRN-------GTGCYCQD 121
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA-- 115
G ++ D +C+D +EC G CSQ C NT GSY+CSC EGY+++ DN +CKA N +
Sbjct: 122 GYEITEDGRSCKDQDECAVYGTCSQTCINTYGSYVCSCVEGYLMQVDNKSCKAKNEPSDK 181
Query: 116 -AFLIISNRHSI--------LVADLEE-KGKDHRAQDI---------------------- 143
L+I+N +I VA L KGK+ D
Sbjct: 182 PPVLLIANYETIEILYLNGSKVAALSSGKGKEIHTLDFIYNEGRVCWIESRESSNQLKCT 241
Query: 144 ---------------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK 188
++ L V+ +A DW+ G+ Y++D +RI VC+ NG+ + L
Sbjct: 242 QITKTGRLTDEWIINILPSLHNVQQMAIDWLTGNFYFVDHVSDRIFVCNRNGSVCVTLID 301
Query: 189 DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248
+ P+ + +DP G LF+TD+G ++ER MDG NR+ I+ +K P L LD+
Sbjct: 302 LELHNPKAIAVDPVSGK--LFFTDYGNVAKVERCDMDGMNRTRIVDSKTEQPAALALDLV 359
Query: 249 TRRVYFADSKLDFID 263
++ VY+ D LD+++
Sbjct: 360 SKLVYWVDLYLDYVE 374
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 130/289 (44%), Gaps = 60/289 (20%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L + +C+ I +FL+ S I LE K
Sbjct: 1822 GGCSQLCLPTSETTRTCMCTVGYNLRKNRMSCQGIE---SFLMYSVHEGIRGIPLEPTDK 1878
Query: 137 ----------------DHRAQ-------------------------DIVVSGLDLVEGLA 155
D A+ DIV +GL VEG+A
Sbjct: 1879 MDALMPISGTSFAVGIDFHAENDTIYWTDMGFNKISRAKRDQTWKEDIVTNGLGRVEGIA 1938
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D N IEV NG+ R V+ + QPR + + P G +LFWT+WG+
Sbjct: 1939 VDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSLAVHPEKG--YLFWTEWGQ 1996
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
NP I + +DGS + ++S I WPNG+++D ++Y+ D+++D I+ LE N
Sbjct: 1997 NPCIGKARLDGSEKVVLVSMGIAWPNGVSIDYEENKLYWCDARIDKIERIDLESGGNREI 2056
Query: 273 ---------VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+ + +YW D ++ G N D ++A + +G
Sbjct: 2057 VLSGSNVDMFSVAVFGAYIYWSDRAHANGSIRRGHKN-DATDAVTMRTG 2104
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 135/328 (41%), Gaps = 74/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSNT--CHPTPLGALCTCPP 57
+C+ CD DC +G+DE GC + C+ C + C+ T C C P
Sbjct: 3752 KCIPTELQCDRFDDCGDGSDE-QGCRIVPTEYTCEDNVNPCGDDAYCNQTQTSVFCRCKP 3810
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G + + C+D+NEC G CSQ C N KGSY C C++ Y + N+TC A
Sbjct: 3811 GFQRNMRNRQCEDLNECLVFGACSQQCVNMKGSYKCVCDQNY--KEKNNTCTAKGSEDQV 3868
Query: 118 LIISNRHSIL--------------VADLEEKGK--------------------------- 136
L ISN IL ++ +E +
Sbjct: 3869 LYISNDTDILGFIYPFNYSGDHQQISHIEHNSRITGMDVYYQRDMIIWSTQFNPGGIFYK 3928
Query: 137 --DHRAQDIVVSGLDLVE-----GLAYDWIGGHIYWLD-SRLN--------------RIE 174
R + SGL E +A DWI G+IYW D SR++ I
Sbjct: 3929 RVHGRERRQTTSGLICPEFKRPRDIAVDWIAGNIYWTDHSRMHWFSYYTTHWTSLRYSIN 3988
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V NG N L + +P + ++P G ++WT G++ IE MDG+ R ++
Sbjct: 3989 VGQLNGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVVGDHSHIEEAAMDGTLRRILVQ 4046
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D ++R+Y+AD +L I
Sbjct: 4047 KNLQRPTGLAVDQFSQRIYWADFELSVI 4074
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 88/158 (55%), Gaps = 13/158 (8%)
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL-DSRLNRI 173
A ++ ++ S L+ + G + + I+ LD VEG+A DWIG ++YW D I
Sbjct: 546 ANYIYFADTTSFLIGRQKIDGTER--ETILKDDLDNVEGIAVDWIGNNLYWTNDGHKKTI 603
Query: 174 EVC--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP------RIERIGMD 225
V + +R L + ++ PRG+++DP G W++WTDW E+ RIE+ MD
Sbjct: 604 SVARLQKASQSRKTLLEGEMSHPRGIVVDPVNG--WMYWTDWEEDEIDDSVGRIEKAWMD 661
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G NR +++K+ WPNGLTLD T +Y+ D+ D I+
Sbjct: 662 GFNRQIFVTSKMLWPNGLTLDSHTNTLYWCDAYYDHIE 699
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 127/339 (37%), Gaps = 99/339 (29%)
Query: 77 PGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK 134
PG CS +C ++ + C C G+ L D +CK + R I
Sbjct: 462 PGGCSHICLLSSNYKTRTCRCRTGFNLGSDGRSCKRPKNELFLFYGKGRPGI-------- 513
Query: 135 GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
V G+DL +A +++ + +N+ P
Sbjct: 514 ----------VRGMDLNTKIADEYM--------------------------IPIENLVNP 537
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
R LD ++++ D + I R +DG+ R TI+ + G+ +D
Sbjct: 538 RA--LDFHAEANYIYFAD-TTSFLIGRQKIDGTERETILKDDLDNVEGIAVDW------- 587
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
I LYW ++G + + + + L+ G++
Sbjct: 588 -----------------------IGNNLYWTNDGHKKT-ISVARLQKASQSRKTLLEGEM 623
Query: 315 YE--ALALDLENGMLYYSTLKCTRWLFWTDWGENP------RIERIGMDGSNRSTIISTK 366
+ +D NG W++WTDW E+ RIE+ MDG NR +++K
Sbjct: 624 SHPRGIVVDPVNG-----------WMYWTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSK 672
Query: 367 IYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+ WPNGLTLD T +Y+ D+ D I+ +GT R+ V
Sbjct: 673 MLWPNGLTLDSHTNTLYWCDAYYDHIEKVFLNGTNRKVV 711
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 16/137 (11%)
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGS---NASILVSGQLY-EALALDLENGMLYYS 330
Y + LYW + + N G+ A I +S + LALD
Sbjct: 2255 YHRAWDTLYWTSSTASSITRHTVDQNRPGAFNREAVITMSEDDHPHVLALD--------- 2305
Query: 331 TLKCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
+C +FWT+W E +P I R + G N ++ST I PNGLT+D + ++YF+D L
Sbjct: 2306 --ECQNLMFWTNWNEQHPSIMRSTLTGKNAHVVVSTDILTPNGLTIDHSAEKLYFSDGSL 2363
Query: 390 DFIDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 2364 GKIERCEYDGSKRYVIV 2380
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 97/244 (39%), Gaps = 58/244 (23%)
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI--EVCDEN---GTNR---IVLAKDN 190
+ ++V + VEGLAY +YW S + I D+N NR I +++D+
Sbjct: 2238 EGRQVIVENVGSVEGLAYHRAWDTLYWTSSTASSITRHTVDQNRPGAFNREAVITMSEDD 2297
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
P + LD +FWT+W E +P I R + G N ++ST I PNGLT+D +
Sbjct: 2298 --HPHVLALDEC--QNLMFWTNWNEQHPSIMRSTLTGKNAHVVVSTDILTPNGLTIDHSA 2353
Query: 250 RRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL 309
++YF+D L KI + DGS ++
Sbjct: 2354 EKLYFSDGSLG----------------------------------KIERCEYDGSKRYVI 2379
Query: 310 VSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYW 369
V L+L + + ++FW+DWG + G + + S +
Sbjct: 2380 VKSGPGTFLSLAVYDN-----------YIFWSDWGRRAILRSNKYTGGDTKVLRSDIPHQ 2428
Query: 370 PNGL 373
P G+
Sbjct: 2429 PMGI 2432
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 17/127 (13%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTRWLF 339
Y++D V +I N +GS L+ +L+ +A+A+D +G L F
Sbjct: 276 FYFVDH----VSDRIFVCNRNGSVCVTLIDLELHNPKAIAVDPVSGKL-----------F 320
Query: 340 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
+TD+G ++ER MDG NR+ I+ +K P L LD+ ++ VY+ D LD+++ +Y G
Sbjct: 321 FTDYGNVAKVERCDMDGMNRTRIVDSKTEQPAALALDLVSKLVYWVDLYLDYVEVVDYQG 380
Query: 400 TGRQQVI 406
R +I
Sbjct: 381 KNRHTII 387
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 39/310 (12%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS MC N S C+C L D TC + FL+ + R I D++
Sbjct: 1517 GPCSHMCLINHNRSAACACPHLMKLSPDKKTCYEMK---KFLLYARRSEIRGVDIDNPYF 1573
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ V +D V + +D +YW D + I+ NGT + +I RG
Sbjct: 1574 NFITA-FTVPDIDDVTVIDFDASEERLYWTDIKTQTIKRAFINGTGLETVISRDIQSIRG 1632
Query: 197 MMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIIS--------------TKIYWPN 241
+ +D +R L+W + + +I +DGS ++++I K+YW +
Sbjct: 1633 LAVDWV--SRNLYWISSEFDETQINVARLDGSLKTSVIHGIDKPQCLAAHPVRGKLYWTD 1690
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
G T+++A + ++SK+ F + K + +++Y + KLYWI GNG I + N+
Sbjct: 1691 GNTINMAN--MDGSNSKILFQNQKD-PVGLSIDY--VENKLYWI-SSGNGT---INRCNL 1741
Query: 302 DGSNASILVS--GQLYEALALDLENGMLYYSTLKCTRWLFWTDW-GENPRIERIGMDGSN 358
DG N ++ S +L +A AL + + L+++ + + G NP + R +
Sbjct: 1742 DGGNLEVIESMKEELTKATALTIMDKKLWWADQNLAQLGTCSKRDGRNPTVLR-----NK 1796
Query: 359 RSTIISTKIY 368
S ++ K+Y
Sbjct: 1797 TSGVVHMKVY 1806
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 92/225 (40%), Gaps = 35/225 (15%)
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++D L+WTD + I+R ++G+ T+IS I GL +D +R +Y+ S
Sbjct: 1589 VIDFDASEERLYWTDI-KTQTIKRAFINGTGLETVISRDIQSIRGLAVDWVSRNLYWISS 1647
Query: 258 KLDFIDCKSLEIKTNVNYSTIFR--------------KLYWIDEGGNGVPLKIGKANMDG 303
+ D + ++ S I KLYW D GN I ANMDG
Sbjct: 1648 EFDETQINVARLDGSLKTSVIHGIDKPQCLAAHPVRGKLYWTD--GN----TINMANMDG 1701
Query: 304 SNASILVSGQLYE-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
SN+ IL Q L++D LY W G N I R +DG N I
Sbjct: 1702 SNSKILFQNQKDPVGLSIDYVENKLY-----------WISSG-NGTINRCNLDGGNLEVI 1749
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
S K L I +++++AD L + C+ GR +L
Sbjct: 1750 ESMKEELTKATALTIMDKKLWWADQNLAQLGTCS-KRDGRNPTVL 1793
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 154/430 (35%), Gaps = 91/430 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCD-----LAECKHKFGLCSNT-CHPTPLGA------- 51
C+ ++C+G DC + +DE D CK CS+ C PT L
Sbjct: 3708 CLRPEQICNGIDDCGDNSDEDHCGDKLTYKTRPCKKDEFACSDKKCIPTELQCDRFDDCG 3767
Query: 52 ------LCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN 105
C P E D+V N C YC+Q T+ S C C G+ N
Sbjct: 3768 DGSDEQGCRIVPTEYTCEDNV-----NPCGDDAYCNQ----TQTSVFCRCKPGFQRNMRN 3818
Query: 106 HTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYW 165
C+ +N F S Q + + G +Y + Y
Sbjct: 3819 RQCEDLNECLVFGACSQ------------------QCVNMKG-------SYKCVCDQNY- 3852
Query: 166 LDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD 225
+ C G+ VL N T G + + + N RI GMD
Sbjct: 3853 ----KEKNNTCTAKGSEDQVLYISNDTDILGFIYPFNYSGDHQQISHIEHNSRI--TGMD 3906
Query: 226 GS-NRSTIISTKIYWPNGLTLDIATRRVYFADSK--LDFIDCKSLEIKTNVNYSTIFRKL 282
R II + + P G I +RV+ + + + C + ++ I +
Sbjct: 3907 VYYQRDMIIWSTQFNPGG----IFYKRVHGRERRQTTSGLICPEFKRPRDIAVDWIAGNI 3962
Query: 283 YWIDEGG-----------NGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYY 329
YW D + I ++G N + L++ E A+A++ + GM+Y
Sbjct: 3963 YWTDHSRMHWFSYYTTHWTSLRYSINVGQLNGPNCTRLLTNMAGEPYAIAVNPKRGMMY- 4021
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
WT G++ IE MDG+ R ++ + P GL +D ++R+Y+AD +L
Sbjct: 4022 ----------WTVVGDHSHIEEAAMDGTLRRILVQKNLQRPTGLAVDQFSQRIYWADFEL 4071
Query: 390 DFIDFCNYDG 399
I +DG
Sbjct: 4072 SVIGSVLFDG 4081
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 26/157 (16%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD + +L L+WTD E+ RI R +
Sbjct: 1248 EIRRIDLHKRDYSLLVPG-LRNTIALDFH----FNQSL-----LYWTDVVED-RIYRGKL 1296
Query: 355 DGSNR----STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
S ++ + P GLT+D +Y+ DS LD I+ DGT R LI
Sbjct: 1297 SESGGVGAIEVVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGTLR--TTLIAG 1354
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
+E A+ALD G+L+++ A F +
Sbjct: 1355 AMEHPR---------AIALDPRYGILFWTDWDANFPR 1382
>gi|195432394|ref|XP_002064208.1| GK20043 [Drosophila willistoni]
gi|194160293|gb|EDW75194.1| GK20043 [Drosophila willistoni]
Length = 1905
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 154/301 (51%), Gaps = 49/301 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-DLAECKHKFGLCSNTCHPTPL-GALCTCPPGEILS 62
C+ L++VCDG DC + +DE C +C K CH P G C CP G LS
Sbjct: 205 CLPLSQVCDGHPDCSDNSDESESCHSKPDCSSKQCPPGAKCHMMPASGPECYCPQGFRLS 264
Query: 63 NDSVTCQDMNECEQP--GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
N + C+D++EC+ P G CSQ C NT G Y C C++GY L DN TC+ ++ L+
Sbjct: 265 NFASKCEDIDECQGPNDGLCSQSCENTSGGYKCLCDDGYELASDNRTCR-VSSEEPLLLY 323
Query: 121 SNRHSILVADLEEKGK-------------------DHRA--------------------- 140
+ +++++ ++ G+ D R
Sbjct: 324 TTQNTVMGMHIKGMGQRSHLMKLAGNLTKVIGVAYDGRQIYWTNIQNEGESIVKANPDGT 383
Query: 141 --QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
Q ++ SGLD E LA DW+ +IY+ D+ + I VC +G N +VL ++ QPRG+
Sbjct: 384 NPQILLTSGLDAPEDLAVDWLTQNIYFSDNIMRHIAVCSNDGLNCVVLVTQDVHQPRGLA 443
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
L P G +FWTDWG+ P I R MDG++ +++ I+WPNG+ LD+ +R+Y+ D+K
Sbjct: 444 LWPERGQ--MFWTDWGDKPMIARASMDGTHSMPLVTENIHWPNGIALDMHQQRIYWVDAK 501
Query: 259 L 259
L
Sbjct: 502 L 502
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 149/350 (42%), Gaps = 76/350 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFG---LCSNTCHPTPLGALCTCPPGEIL 61
C+++++VC+ DC NG DEGP C A C+ G +C + C TP GA+C+C G L
Sbjct: 1273 CLDMSRVCNNFNDCLNGNDEGPQCATA-CRANAGGRKVCQHKCRATPAGAVCSCFDGYRL 1331
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D +C D++EC + C+Q+C NT+G Y C C+ ++L D +CK+I + L+ S
Sbjct: 1332 DIDQRSCVDIDECAEQQPCAQLCENTRGGYQCQCHADFMLRQDRVSCKSIQGGGSSLLFS 1391
Query: 122 NRHSILVADLEEK----GKDHRAQDIVVSG--LDLVEGLAY------------------- 156
+ + V + ++ A D +SG LD++ LAY
Sbjct: 1392 SYNE--VRNFSDQPVMLSVAWSANDSRISGFDLDMIRELAYFSSEEQDAIYQIDVHTHHI 1449
Query: 157 --------------DWIGGHIYWLDSRL-------NRIEVC--DENGTNRIV-LAKDNIT 192
DW G++Y L + ++I VC + RI+ + N
Sbjct: 1450 KRALSLKSPTKLSVDWTTGNVYVLHGTMGGGSSFSHQISVCSFEAKMCGRIIEMRAKNQM 1509
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIG----------MDGSNRSTIISTKIYWPNG 242
+ + +D LF+ R++R G +DGS + ++ +
Sbjct: 1510 HLKHLAVDAYHAR--LFYVAV----RLDRFGPSTSEMYMSRLDGSRQELLLHKPSSYITA 1563
Query: 243 LTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
L +D + +Y+ D + + LE + V S RK + + N +
Sbjct: 1564 LAIDPHQQHLYYTD-----LHNRRLERLSYVKRSGPIRKPEVLLQKSNAI 1608
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 92/440 (20%), Positives = 156/440 (35%), Gaps = 83/440 (18%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHK-------FGLCSNTCHPTPLGALCT 54
++C+ CDG+ DC +G+DE CD + +HK + TC P L
Sbjct: 1213 GNQCIRKEFHCDGERDCDDGSDE-VLCDNQKGQHKNQSAIESWSTARRTCRPH----LFD 1267
Query: 55 CPPGEILSNDSVTCQDMNEC-----EQP-------------GYCSQMCTNTKGSYICSCN 96
C G+ L V C + N+C E P C C T +CSC
Sbjct: 1268 CQDGDCLDMSRV-CNNFNDCLNGNDEGPQCATACRANAGGRKVCQHKCRATPAGAVCSCF 1326
Query: 97 EGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAY 156
+GY L+ D +C I+ A + + + G + + D V +
Sbjct: 1327 DGYRLDIDQRSCVDIDECA-----EQQPCAQLCENTRGGYQCQCHADFMLRQDRVSCKSI 1381
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
GG L S N + + V N ++ G LD R L + E
Sbjct: 1382 Q--GGGSSLLFSSYNEVRNFSDQPVMLSVAWSANDSRISGFDLDM---IRELAYFSSEEQ 1436
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
I +I + + +S K P L++D T VY
Sbjct: 1437 DAIYQIDVHTHHIKRALSLKS--PTKLSVDWTTGNVYV---------------------- 1472
Query: 277 TIFRKLYWIDEGGNGVPLKIG----KANMDGSNASILVSGQLY-EALALDLENGMLYYST 331
L+ GG+ +I +A M G + Q++ + LA+D + L+Y
Sbjct: 1473 -----LHGTMGGGSSFSHQISVCSFEAKMCGRIIEMRAKNQMHLKHLAVDAYHARLFYVA 1527
Query: 332 LKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD---SK 388
++ R+ T R +DGS + ++ + L +D + +Y+ D +
Sbjct: 1528 VRLDRFGPSTSEMYMSR-----LDGSRQELLLHKPSSYITALAIDPHQQHLYYTDLHNRR 1582
Query: 389 LDFIDFCNYDGTGRQQVILI 408
L+ + + G R+ +L+
Sbjct: 1583 LERLSYVKRSGPIRKPEVLL 1602
>gi|392348189|ref|XP_003750041.1| PREDICTED: low-density lipoprotein receptor-related protein 8
isoform 2 [Rattus norvegicus]
Length = 958
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 154/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ K C+ + DC +G+DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 306 CILAIKRCNQERDCLDGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL 364
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ P CSQ+C N KG + C C+ GY ++ CKA+ + LI +N
Sbjct: 365 -DQKTCGDIDECQDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAVAGRSPSLIFTN 423
Query: 123 RHSILVADLEEKG--------KDHRAQDIVV----------------------------- 145
RH + DL ++ K+ A D+ V
Sbjct: 424 RHEVRRIDLVKRDYSRLIPMLKNVVALDVEVDTNRIYWCDLSYRKIYSAHMDKASIPDEQ 483
Query: 146 -----SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
L EGLA DW+ HIYW DS + V +G R L ++++PR + +D
Sbjct: 484 VVLIGEQLHSPEGLAVDWVHKHIYWTDSGNKTVSVATTDGRRRCTLFNRDLSEPRAIAVD 543
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG +IE+ G++G++R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 544 PLRG--FMYWSDWGFQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 600
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 175/418 (41%), Gaps = 81/418 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSN-TCHPTPLGALCTCPPGE--IL 61
C++L CDG DC + +DE C C+ C + TC + A+ C +
Sbjct: 267 CIHLGWRCDGDRDCKDKSDEA-DCSPGPCRENDFQCGDGTC----ILAIKRCNQERDCLD 321
Query: 62 SNDSVTC-QDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SA 115
+D C Q +NEC G CS +CT+ K + C+C G+ L D TC I+ A
Sbjct: 322 GSDEAGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGDIDECQDPDA 380
Query: 116 AFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEV 175
I N + + D + V G + I + + + RI++
Sbjct: 381 CSQICVNYKGYFKCECHPGYE----MDTLTKNCKAVAGRSPSLIFTNRH----EVRRIDL 432
Query: 176 CDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RST 231
+ + I + K+ + LD T ++W D +I MD ++ +
Sbjct: 433 VKRDYSRLIPMLKNVVA------LDVEVDTNRIYWCDLSYR-KIYSAHMDKASIPDEQVV 485
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+I +++ P GL +D + + +YW D G
Sbjct: 486 LIGEQLHSPEGLAVDW------------------------------VHKHIYWTDSGNKT 515
Query: 292 VPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
V + A DG L + L E A+A+D G +Y W+DWG +I
Sbjct: 516 VSV----ATTDGRRRCTLFNRDLSEPRAIAVDPLRGFMY-----------WSDWGFQAKI 560
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
E+ G++G++R T++S I WPNG+TLD+ ++R+Y+ DSKL + +++G R+ +I
Sbjct: 561 EKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFNGGNRKMLIF 618
>gi|392348185|ref|XP_003750040.1| PREDICTED: low-density lipoprotein receptor-related protein 8
isoform 1 [Rattus norvegicus]
Length = 899
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 154/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ K C+ + DC +G+DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 306 CILAIKRCNQERDCLDGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL 364
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ P CSQ+C N KG + C C+ GY ++ CKA+ + LI +N
Sbjct: 365 -DQKTCGDIDECQDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAVAGRSPSLIFTN 423
Query: 123 RHSILVADLEEKG--------KDHRAQDIVV----------------------------- 145
RH + DL ++ K+ A D+ V
Sbjct: 424 RHEVRRIDLVKRDYSRLIPMLKNVVALDVEVDTNRIYWCDLSYRKIYSAHMDKASIPDEQ 483
Query: 146 -----SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
L EGLA DW+ HIYW DS + V +G R L ++++PR + +D
Sbjct: 484 VVLIGEQLHSPEGLAVDWVHKHIYWTDSGNKTVSVATTDGRRRCTLFNRDLSEPRAIAVD 543
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG +IE+ G++G++R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 544 PLRG--FMYWSDWGFQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 600
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 174/417 (41%), Gaps = 79/417 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGE--ILS 62
C++L CDG DC + +DE C C+ C + T + A+ C +
Sbjct: 267 CIHLGWRCDGDRDCKDKSDEA-DCSPGPCRENDFQCGDG---TCILAIKRCNQERDCLDG 322
Query: 63 NDSVTC-QDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SAA 116
+D C Q +NEC G CS +CT+ K + C+C G+ L D TC I+ A
Sbjct: 323 SDEAGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGDIDECQDPDAC 381
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
I N + + D + V G + I + + + RI++
Sbjct: 382 SQICVNYKGYFKCECHPGYE----MDTLTKNCKAVAGRSPSLIFTNRH----EVRRIDLV 433
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RSTI 232
+ + I + K+ + LD T ++W D +I MD ++ + +
Sbjct: 434 KRDYSRLIPMLKNVVA------LDVEVDTNRIYWCDLSYR-KIYSAHMDKASIPDEQVVL 486
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
I +++ P GL +D + + +YW D G V
Sbjct: 487 IGEQLHSPEGLAVDW------------------------------VHKHIYWTDSGNKTV 516
Query: 293 PLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
+ A DG L + L E A+A+D G +Y W+DWG +IE
Sbjct: 517 SV----ATTDGRRRCTLFNRDLSEPRAIAVDPLRGFMY-----------WSDWGFQAKIE 561
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+ G++G++R T++S I WPNG+TLD+ ++R+Y+ DSKL + +++G R+ +I
Sbjct: 562 KAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFNGGNRKMLIF 618
>gi|327264143|ref|XP_003216875.1| PREDICTED: low-density lipoprotein receptor 1-like [Anolis
carolinensis]
Length = 863
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 154/298 (51%), Gaps = 47/298 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + KVC+G DC + +DE C EC K G CS+ C+ +G C CP G L
Sbjct: 283 ECITMDKVCNGLKDCRDWSDEPLKECRTNECLAKKGGCSHICNDLKIGYECLCPEGFHLI 342
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D+NEC P CSQ C N +GSY C C EGY ++ TCKAI + A+L +N
Sbjct: 343 -DQRKCEDINECLNPDTCSQSCVNLEGSYKCECKEGYQIDPVTKTCKAIG-TIAYLFFTN 400
Query: 123 RHSI--------------------LVADLE---------------------EKGKDHRAQ 141
RH + + D+E + +H
Sbjct: 401 RHEVRKMTLDRSEYTSLIPKLKNAVALDMEVSNNKIYWSDSSQKKIFSTPIDTAHNHSHH 460
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
V+ SG+ +GLA DWI G+IYW DS L I V + G+ R +L K+ +PR +++D
Sbjct: 461 TTVIDSGIRFPDGLAVDWIHGNIYWTDSGLGSISVANSEGSKRKMLIKELGAKPRAIVVD 520
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
P G +++WTDWG + +I + G++G + +++ I WPNG+TLD+ +R+Y+ DSK
Sbjct: 521 PVRG--FMYWTDWGISAKIAKSGLNGVDNFPLVTEGIQWPNGITLDLVNQRLYWVDSK 576
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 101/462 (21%), Positives = 177/462 (38%), Gaps = 79/462 (17%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGP----------------GCDLAECKHKFGLCSNT-- 43
+ C+ CD DC +G+DE P C EC H+ C +
Sbjct: 157 SSECIPKLWACDNDADCKDGSDESPVLCGKQVTNPCSPLEFHCGSGECIHQSWKCDGSFD 216
Query: 44 CHPTPLGALC---TCPPGEILSNDSVTCQDMNECEQPGYCSQM--------CTNTKGSYI 92
C A C TC P + ND +C + C M T KG I
Sbjct: 217 CKDRSDEANCAKVTCRPDQFECNDGTCIHGSLQCNKENDCKDMSDEVGCINVTTCKGPNI 276
Query: 93 CSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK-DHRAQDIVVSGLDLV 151
C G + D C + + + L +KG H D+ + G + +
Sbjct: 277 FKCGSGECITMDK-VCNGLKDCRDWSDEPLKECRTNECLAKKGGCSHICNDLKI-GYECL 334
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT------ 205
+ I + + C ++ N K + G +DP T
Sbjct: 335 CPEGFHLIDQRKCEDINECLNPDTCSQSCVNLEGSYKCECKE--GYQIDPVTKTCKAIGT 392
Query: 206 -RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
+LF+T+ E + ++ +D S +++I K+ L ++++ ++Y++DS I
Sbjct: 393 IAYLFFTNRHE---VRKMTLDRSEYTSLIP-KLKNAVALDMEVSNNKIYWSDSSQKKIFS 448
Query: 265 KSLEIKTNVNYST-----------------IFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307
++ N ++ T I +YW D G + + AN +GS
Sbjct: 449 TPIDTAHNHSHHTTVIDSGIRFPDGLAVDWIHGNIYWTDSGLGSISV----ANSEGSKRK 504
Query: 308 ILVS--GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
+L+ G A+ +D G +Y WTDWG + +I + G++G + +++
Sbjct: 505 MLIKELGAKPRAIVVDPVRGFMY-----------WTDWGISAKIAKSGLNGVDNFPLVTE 553
Query: 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
I WPNG+TLD+ +R+Y+ DSK + DG R+ +++
Sbjct: 554 GIQWPNGITLDLVNQRLYWVDSKYHSVFSIGVDGENRKTILM 595
>gi|355699834|gb|AES01253.1| low density lipoprotein receptor-related protein 8, apolipoprotein
e receptor [Mustela putorius furo]
Length = 663
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 154/299 (51%), Gaps = 47/299 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 82 ECITLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKVGYECLCPEGFRLV 141
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC+ P CSQ+C N +GSY C C +GY L+ CKA+ A+L +N
Sbjct: 142 -DRRRCEDIDECQDPDVCSQLCVNLEGSYKCDCEKGYQLDPHTKACKAVG-DIAYLFFTN 199
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L+ ++
Sbjct: 200 RHEVRKMTLDRSEYTSLIPNLKNVVALDTEVASNRIYWSDLSQRKIYSTQIDRAPGFSTY 259
Query: 142 DIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D ++S G+ +GLA DW+ +IYW DS L + + D +G R L ++++PR + +D
Sbjct: 260 DTIISEGVQAPDGLAVDWVHSNIYWTDSVLGTVSIADMDGGRRCTLFSQDLSEPRAIAVD 319
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG +IE+ G++G +R T++S I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 320 PLRG--FMYWSDWGYQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLNQRLYWVDSKL 376
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 173/429 (40%), Gaps = 104/429 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC---DLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
C++ ++ CD + DC + +DE GC L E KF S C L +C
Sbjct: 42 CIHGSRQCDREYDCKDSSDEL-GCINVTLCEGPSKFKCHSGEC--ITLDKVC-------- 90
Query: 62 SNDSVTCQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110
N C+D NEC + G CS +C + K Y C C EG+ L D C+
Sbjct: 91 -NSVRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKVGYECLCPEGFRL-VDRRRCED 148
Query: 111 INHSAAFLIISNRHSILVADLE-------EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHI 163
I+ + S L +LE EKG D V +AY +
Sbjct: 149 IDECQDPDVCSQ----LCVNLEGSYKCDCEKGYQ---LDPHTKACKAVGDIAY------L 195
Query: 164 YWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIG 223
++ + R D + ++ N+ + LD + ++W+D + +I
Sbjct: 196 FFTNRHEVRKMTLDRSEYTSLIPNLKNV-----VALDTEVASNRIYWSDLSQR-KIYSTQ 249
Query: 224 MDG----SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIF 279
+D S TIIS + P+GL +D +Y+ DS L
Sbjct: 250 IDRAPGFSTYDTIISEGVQAPDGLAVDWVHSNIYWTDSVLG------------------- 290
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRW 337
+ A+MDG L S L E A+A+D G +Y
Sbjct: 291 ---------------TVSIADMDGGRRCTLFSQDLSEPRAIAVDPLRGFMY--------- 326
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
W+DWG +IE+ G++G +R T++S I WPNG+TLD+ +R+Y+ DSKL + +
Sbjct: 327 --WSDWGYQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLNQRLYWVDSKLHQLSSIDL 384
Query: 398 DGTGRQQVI 406
+G R+ +I
Sbjct: 385 NGGNRKMLI 393
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 24/169 (14%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENPRIERI 352
++ K +D S + L+ L +ALD E + +Y+S L R ++ T P
Sbjct: 202 EVRKMTLDRSEYTSLIP-NLKNVVALDTEVASNRIYWSDLS-QRKIYSTQIDRAPGF--- 256
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
S TIIS + P+GL +D +Y+ DS L + + DG GR+ +
Sbjct: 257 ----STYDTIISEGVQAPDGLAVDWVHSNIYWTDSVLGTVSIADMDG-GRRCTL------ 305
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG--AEFLKTPLFCITRNYFL 459
F+ DL A+A+D G +Y+S G A+ K+ L + R +
Sbjct: 306 -FSQDLSEPR---AIAVDPLRGFMYWSDWGYQAKIEKSGLNGVDRQTLV 350
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL--AKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D NG NR +L + D ++ P G+
Sbjct: 347 QTLVSDNIEWPNGITLDLLNQRLYWVDSKLHQLSSIDLNGGNRKMLISSPDFLSHPFGIA 406
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 407 VFEDK----VFWTD 416
>gi|45555120|ref|NP_996433.1| yolkless, isoform B [Drosophila melanogaster]
gi|47117786|sp|P98163.2|YL_DROME RecName: Full=Putative vitellogenin receptor; AltName: Full=Protein
yolkless; Short=YL; Flags: Precursor
gi|45446948|gb|AAS65339.1| yolkless, isoform B [Drosophila melanogaster]
Length = 1984
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 150/312 (48%), Gaps = 61/312 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADE------GPGCDLAECKHKFGLCSNTCHPTPL-GALCTCPP 57
C+ L++VCDG +DC +G+DE P CD +C CH P GA C CP
Sbjct: 281 CLTLSEVCDGHSDCSDGSDETDLCHSKPDCDAKKCA-----LGAKCHMMPASGAECFCPK 335
Query: 58 GEILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI----N 112
G L+ C+D++EC EQ CSQ C NT G Y C C+ GY+L+ DN TC+A+
Sbjct: 336 GFRLAKFEDKCEDVDECKEQDDLCSQGCENTSGGYRCVCDAGYLLDKDNRTCRAVVYGSK 395
Query: 113 HSAAFLIISNRHSILVADLEE--------------------------------------- 133
L+ + + +I+ L E
Sbjct: 396 EQQPLLLYTTQMTIMGMHLREDNVRNHVYQVAGNLSKVIGVAYDGSHIYWTNIQNEAESI 455
Query: 134 ---KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
G A+ ++ SGLD E LA DW+ +IY+ D+ + I VC +G N VL +
Sbjct: 456 VKANGDGSNAEILLTSGLDAPEDLAVDWLTQNIYFSDNIMRHIAVCSNDGLNCAVLVTQD 515
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ QPR + + P G +FWTDWGE P I R MDGS I+S I WPNG+ LD+ +
Sbjct: 516 VHQPRSLAVWPQKG--LMFWTDWGEKPMIGRASMDGSRSRPIVSDNIEWPNGIALDMHQQ 573
Query: 251 RVYFADSKLDFI 262
R+Y+ D+KL +
Sbjct: 574 RIYWVDAKLGSV 585
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 137/317 (43%), Gaps = 59/317 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFG--LCSNTCHPTPLGALCTCPPGEILS 62
CV+L++VC+ DC NG DEGP C A C+ G +C + C TP GA+C+C G L
Sbjct: 1352 CVDLSRVCNNFPDCTNGHDEGPKCATA-CRSASGRQVCQHKCRATPAGAVCSCFDGYRLD 1410
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D +C D++EC++ C+Q+C NT G Y C C+ ++L D +CK++ A L S
Sbjct: 1411 ADQKSCLDIDECQEQQPCAQLCENTLGGYQCQCHADFMLRQDRVSCKSLQSGATLLFSSF 1470
Query: 123 RHSILVADLEEK----GKDHRAQDIVVSGLDLV------------EGLAY---------- 156
V +L E+ A D ++G DL EG+ Y
Sbjct: 1471 NE---VRNLSEQPVMLNVAWSANDSRITGFDLAMHRQMGYFSAEDEGIVYQIDLQTKVIV 1527
Query: 157 -------------DWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDP 201
DW+ G++Y L S I+ C G RIV ++ PR +
Sbjct: 1528 RALGLPAPTKLSVDWVTGNVYVL-SGAQEIQACSFVGRMCGRIV----HVKSPRHVKHLA 1582
Query: 202 SPGTRWLFW------TDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
G + +G+ + I +DGS R ++ + LT D + +YF
Sbjct: 1583 VDGYHARIFYIVIRTEGYGQTSSEIHMARLDGSRRDMLLQRSESFMTALTTDPHQQLLYF 1642
Query: 255 ADSKLDFIDCKSLEIKT 271
D + ++ S +KT
Sbjct: 1643 VDQHMRTLERISYRLKT 1659
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 175/447 (39%), Gaps = 89/447 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAE--CKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + +CDG+ DC + +DE GC AE C + LC+N G L
Sbjct: 197 CIPIDFMCDGRPDCTDKSDEVAGCKQAEITCPGEGHLCAN---------------GRCLR 241
Query: 63 NDSVTCQDMNEC----EQPGYCSQMCTNTKGSYICSCNEGYVLEY---DNHT-------- 107
C +++C ++ G C +C KG ++C E + D H+
Sbjct: 242 RKQWVCDGVDDCGDGSDERG-CLNLCEPQKGKFLCRNRETCLTLSEVCDGHSDCSDGSDE 300
Query: 108 --------------------CKAINHSAAFLIISNRHSILVADLEEKGKD----HRAQDI 143
C + S A +A E+K +D D+
Sbjct: 301 TDLCHSKPDCDAKKCALGAKCHMMPASGAECFCPK--GFRLAKFEDKCEDVDECKEQDDL 358
Query: 144 VVSGLDLVEGLAYDWI--GGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
G + G Y + G++ D+R R V ++L +T GM L
Sbjct: 359 CSQGCENTSG-GYRCVCDAGYLLDKDNRTCRAVVYGSKEQQPLLLYTTQMT-IMGMHLRE 416
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
R + G ++ + DGS+ IYW N + + S +
Sbjct: 417 D-NVRNHVYQVAGNLSKVIGVAYDGSH--------IYWTNIQNEAESIVKANGDGSNAEI 467
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
+ L+ ++ + + +Y+ D + I + DG N ++LV+ +++ +L
Sbjct: 468 LLTSGLDAPEDLAVDWLTQNIYFSDN----IMRHIAVCSNDGLNCAVLVTQDVHQPRSLA 523
Query: 322 L--ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + G+ +FWTDWGE P I R MDGS I+S I WPNG+ LD+
Sbjct: 524 VWPQKGL-----------MFWTDWGEKPMIGRASMDGSRSRPIVSDNIEWPNGIALDMHQ 572
Query: 380 RRVYFADSKLDFIDFCNYDGTGRQQVI 406
+R+Y+ D+KL + DGTGR+ V+
Sbjct: 573 QRIYWVDAKLGSVQTVRPDGTGRRTVL 599
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 10/108 (9%)
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
R++ IV ++ G+A D IYW+D++L ++ +GT R + + P G+
Sbjct: 551 RSRPIVSDNIEWPNGIALDMHQQRIYWVDAKLGSVQTVRPDGTGRRTVLDGMLKHPYGLA 610
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNR------STIISTKIYWP 240
+ L+W+DW G + TI + IY P
Sbjct: 611 IFED----QLYWSDWATKSVHACHKFSGKDHRILAKDRTIYAVHIYHP 654
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 108/276 (39%), Gaps = 36/276 (13%)
Query: 27 GCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMN-------------- 72
GC+ A C H L P G C CP G L+ D C M
Sbjct: 663 GCENATCSHLCLLAE----PEIGGHSCACPDGMRLAPDHRRCMLMEKRQRLFIGLGQVLL 718
Query: 73 ECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE 132
E E + + + + C NE + Y+ IN S LII++ L+ LE
Sbjct: 719 EIEHTAFGRHQVSKSY-TLPCLINE---MVYNR-----INGS---LIIADNDQRLI--LE 764
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA-KDNI 191
+ + H + +V S L V LA+D + ++YW D+ IEV +R ++
Sbjct: 765 FQPESHESNVLVRSNLGNVSALAFDHLSRNLYWADTERAVIEVLSLQTRHRALIRFFPGQ 824
Query: 192 TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL--DIAT 249
P G+ + P+ G ++ + I++I + G + + + L D T
Sbjct: 825 EVPIGLTVMPAEGYLYVVLK-AKRHSHIDKIPLSGKGEQVHVFEDDLGDDDIKLVTDYET 883
Query: 250 RRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
+ ++++DS L I + + + + R+ Y +
Sbjct: 884 QTIFWSDSDLGRISYSNYRVPHSQIFRGKLRRPYSL 919
>gi|15425721|dbj|BAB64338.1| vitellogenin receptor [Conger myriaster]
Length = 373
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 103/299 (34%), Positives = 147/299 (49%), Gaps = 44/299 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ ++KVC+ DCP+ +DE C+L EC G CS+ C +G C C PG L
Sbjct: 40 CIEMSKVCNKNRDCPDWSDEPLRECNLNECLLNNGGCSHICRDMVIGYECDCTPGLQLI- 98
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D TC D+NEC PG CSQ+C N KG Y C C+ GY ++ CKA+ + + R
Sbjct: 99 DRKTCGDINECLNPGICSQICINLKGGYKCECHSGYQMDPTTGVCKAVGKEPCLIFTNRR 158
Query: 124 -------------------------------HSILVADLEEKG-----KDHRAQD----I 143
I ADL +K D R +D
Sbjct: 159 DIRKLGLERMEYTQIVEQLRNTVALDADFTQQKIFWADLGQKAIYSTVLDKRDEDNSHTK 218
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
V+ + G+A DWI ++YW D I V D +G R VL + +P + +DP
Sbjct: 219 VIDNVQTPVGIAVDWIYKNLYWSDLGAKTITVADFSGAKRKVLFNSGLKEPASIAVDPLS 278
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W+DWGE +IE+ GM+G +R +++T I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 279 G--FLYWSDWGEPAKIEKSGMNGVDRQVLVATDIQWPNGITLDLIKSRLYWVDSKLHML 335
>gi|535346|gb|AAB60217.1| vitellogenin receptor [Drosophila melanogaster]
gi|1095169|prf||2107325A vitellogenin receptor
Length = 1984
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 150/312 (48%), Gaps = 61/312 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADE------GPGCDLAECKHKFGLCSNTCHPTPL-GALCTCPP 57
C+ L++VCDG +DC +G+DE P CD +C CH P GA C CP
Sbjct: 281 CLTLSEVCDGHSDCSDGSDETDLCHSKPDCDAKKCA-----LGAKCHMMPASGAECFCPK 335
Query: 58 GEILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI----N 112
G L+ C+D++EC EQ CSQ C NT G Y C C+ GY+L+ DN TC+A+
Sbjct: 336 GFRLAKFEDKCEDVDECKEQDDLCSQGCENTSGGYRCVCDAGYLLDKDNRTCRAVVYGSK 395
Query: 113 HSAAFLIISNRHSILVADLEE--------------------------------------- 133
L+ + + +I+ L E
Sbjct: 396 EQQPLLLYTTQMTIMGMHLREDNVRNHVYQVAGNLSKVIGVAYDGSHIYWTNIQNEAESI 455
Query: 134 ---KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
G A+ ++ SGLD E LA DW+ +IY+ D+ + I VC +G N VL +
Sbjct: 456 VKANGDGSNAEILLTSGLDAPEDLAVDWLTQNIYFSDNIMRHIAVCSNDGLNCAVLVTQD 515
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ QPR + + P G +FWTDWGE P I R MDGS I+S I WPNG+ LD+ +
Sbjct: 516 VHQPRSLAVWPQKG--LMFWTDWGEKPMIGRASMDGSRSRPIVSDNIEWPNGIALDMHQQ 573
Query: 251 RVYFADSKLDFI 262
R+Y+ D+KL +
Sbjct: 574 RIYWVDAKLGSV 585
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 137/317 (43%), Gaps = 59/317 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFG--LCSNTCHPTPLGALCTCPPGEILS 62
CV+L++VC+ DC NG DEGP C A C+ G +C + C TP GA+C+C G L
Sbjct: 1352 CVDLSRVCNNFPDCTNGHDEGPKCATA-CRSASGRQVCQHKCRATPAGAVCSCFDGYRLD 1410
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D +C D++EC++ C+Q+C NT G Y C C+ ++L D +CK++ A L S
Sbjct: 1411 ADQKSCLDIDECQEQQPCAQLCENTLGGYQCQCHADFMLRQDRVSCKSLQSGATLLFSSF 1470
Query: 123 RHSILVADLEEK----GKDHRAQDIVVSGLDLV------------EGLAY---------- 156
V +L E+ A D ++G DL EG+ Y
Sbjct: 1471 NE---VRNLSEQPVMLNVAWSANDSRITGFDLAMHRQMGYFSAEDEGIVYQVDLQTKVIV 1527
Query: 157 -------------DWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDP 201
DW+ G++Y L S I+ C G RIV ++ PR +
Sbjct: 1528 RALGLPAPTKLSVDWVTGNVYVL-SGAQEIQACSFVGRMCGRIV----HVKSPRHVKHLA 1582
Query: 202 SPGTRWLFW------TDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
G + +G+ + I +DGS R ++ + LT D + +YF
Sbjct: 1583 VDGYHARIFYIVIRTEGYGQTSSEIHMARLDGSRRDMLLQRSESFMTALTTDPHQQLLYF 1642
Query: 255 ADSKLDFIDCKSLEIKT 271
D + ++ S +KT
Sbjct: 1643 VDQHMRTLERISYRLKT 1659
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 175/447 (39%), Gaps = 89/447 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAE--CKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + +CDG+ DC + +DE GC AE C + LC+N G L
Sbjct: 197 CIPIDFMCDGRPDCTDKSDEVAGCKQAEITCPGEGHLCAN---------------GRCLR 241
Query: 63 NDSVTCQDMNEC----EQPGYCSQMCTNTKGSYICSCNEGYVLEY---DNHT-------- 107
C +++C ++ G C +C KG ++C E + D H+
Sbjct: 242 RKQWVCDGVDDCGDGSDERG-CLNLCEPQKGKFLCRNRETCLTLSEVCDGHSDCSDGSDE 300
Query: 108 --------------------CKAINHSAAFLIISNRHSILVADLEEKGKD----HRAQDI 143
C + S A +A E+K +D D+
Sbjct: 301 TDLCHSKPDCDAKKCALGAKCHMMPASGAECFCPK--GFRLAKFEDKCEDVDECKEQDDL 358
Query: 144 VVSGLDLVEGLAYDWI--GGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
G + G Y + G++ D+R R V ++L +T GM L
Sbjct: 359 CSQGCENTSG-GYRCVCDAGYLLDKDNRTCRAVVYGSKEQQPLLLYTTQMT-IMGMHLRE 416
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
R + G ++ + DGS+ IYW N + + S +
Sbjct: 417 D-NVRNHVYQVAGNLSKVIGVAYDGSH--------IYWTNIQNEAESIVKANGDGSNAEI 467
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
+ L+ ++ + + +Y+ D + I + DG N ++LV+ +++ +L
Sbjct: 468 LLTSGLDAPEDLAVDWLTQNIYFSDN----IMRHIAVCSNDGLNCAVLVTQDVHQPRSLA 523
Query: 322 L--ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + G+ +FWTDWGE P I R MDGS I+S I WPNG+ LD+
Sbjct: 524 VWPQKGL-----------MFWTDWGEKPMIGRASMDGSRSRPIVSDNIEWPNGIALDMHQ 572
Query: 380 RRVYFADSKLDFIDFCNYDGTGRQQVI 406
+R+Y+ D+KL + DGTGR+ V+
Sbjct: 573 QRIYWVDAKLGSVQTVRPDGTGRRTVL 599
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 10/108 (9%)
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
R++ IV ++ G+A D IYW+D++L ++ +GT R + + P G+
Sbjct: 551 RSRPIVSDNIEWPNGIALDMHQQRIYWVDAKLGSVQTVRPDGTGRRTVLDGMLKHPYGLA 610
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNR------STIISTKIYWP 240
+ L+W+DW G + TI + IY P
Sbjct: 611 IFED----QLYWSDWATKSVHACHKFSGKDHRILAKDRTIYAVHIYHP 654
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 108/271 (39%), Gaps = 40/271 (14%)
Query: 27 GCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMN-------------- 72
GC+ A C H L P G C CP G L+ D C M
Sbjct: 663 GCENATCSHLCLLAE----PEIGGHSCACPDGMRLAPDHRRCMLMEKRQRLFIGLGQVLL 718
Query: 73 ECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE 132
E E + + + + + C NE + Y+ IN S LII++ L+ LE
Sbjct: 719 EIEHTAFGAHQVSKSY-TLPCLINE---MVYNR-----INGS---LIIADNDQRLI--LE 764
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA-KDNI 191
+ + H + +V S L V LA+D + ++YW D+ IEV +R ++
Sbjct: 765 FQPESHESNVLVRSNLGNVSALAFDHLSRNLYWADTERAVIEVLSLQTRHRALIRFFPGQ 824
Query: 192 TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL--DIAT 249
P G+ + P+ G ++ + I++I + G + + + L D T
Sbjct: 825 EVPIGLTVMPAEGYLYVVLK-AKRHSHIDKIPLSGKGEQVHVFEDDLGDDDIKLVTDYET 883
Query: 250 RRVYFADSKLDFIDCKSLEIKTNVNYSTIFR 280
+ ++++DS L I + V +S IFR
Sbjct: 884 QTIFWSDSDLGRISYSNYR----VPHSQIFR 910
>gi|224056122|ref|XP_002194404.1| PREDICTED: low-density lipoprotein receptor-related protein 1B
[Taeniopygia guttata]
Length = 4577
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 184/420 (43%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGAL-CTCPPGEILSN 63
C+ K+C+G+ DCP+G+DEG CD EC G CS+ C P G + C+CP G L+
Sbjct: 1129 CLQPEKLCNGRRDCPDGSDEGDLCD--ECSLNNGGCSHQCSVVPGGRIVCSCPAGFNLTT 1186
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ M+ C + CSQ+C K + CSC EG+ L D +C + + AF+I S R
Sbjct: 1187 DNKTCEIMDYCSKHLKCSQVCEQHKNTVKCSCYEGWKLSKDGESCVSTDPFEAFIIFSIR 1246
Query: 124 HSILVADLEEKGKD--------------HRAQD--------------------------- 142
H I DL ++ H +Q
Sbjct: 1247 HEIRKIDLHKRDYSLLVPGLRNTIALDFHFSQSLLYWTDVVEDKIYRGKLSDTGGVSAIE 1306
Query: 143 -IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +GT R L + PR + LDP
Sbjct: 1307 VVVQHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGTLRTTLIAGAMEHPRAIALDP 1366
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R I WPNGLT+D +R+ + D++
Sbjct: 1367 RYGI--LFWTDWDANFPRIESASMSGAERKIIYKDMDTGAWPNGLTVDHFEKRIVWTDAR 1424
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG++ ++ G Y +
Sbjct: 1425 SDAI------------YSALY----------------------DGTSMIEIIRGHEYLSH 1450
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 1451 PFAVS---LYGSE------VYWTDWRTNTLAKANKWTGQNVSVIQKTSAQPFDLQIYHPS 1501
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 151/302 (50%), Gaps = 45/302 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ ++VCD K DC +G+DE C + EC K CS C P+G C C PG +L
Sbjct: 2881 KCIPQSEVCDKKEDCSDGSDE-KSCHINECLSKKVSGCSQDCQDLPVGYKCKCWPGFLLK 2939
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C EGY + DN + CK+++ FLI++
Sbjct: 2940 DDGKTCVDIDECSSGFPCSQQCINTYGTYKCLCAEGYETQPDNPNGCKSLSDEEPFLILA 2999
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
+ H I L ++G D+R + I
Sbjct: 3000 DHHEIRKISTDGSNYTLLKQGLNNVIAIDFDYREEFIYWIDSSRPNGSRINRMSLNGSDI 3059
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG VL + PR + LDP
Sbjct: 3060 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTVLVSKRVKFPRDLSLDPQ 3119
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD-SKLDF 261
G +L+W D E+P I R+GMDGS +S +I T+I P LT+D R+Y+AD + ++F
Sbjct: 3120 AG--YLYWIDCCESPHIGRVGMDGSRQSVVIETQISRPMALTIDYVNHRLYWADENHIEF 3177
Query: 262 ID 263
D
Sbjct: 3178 SD 3179
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 155/317 (48%), Gaps = 65/317 (20%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEG-------PGCDLAECKHKFGLCSNTCHPTPLGALCTC 55
++C++L+++C+G DC +G DEG P C C+H+ + N G C C
Sbjct: 67 NKCIHLSQLCNGVYDCSDGYDEGVHCRELLPRCQQMNCQHRCAITRN-------GTRCYC 119
Query: 56 PPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA 115
G S D +C D+NEC+ G CSQMC NT GSY CSC EGYVL+ DN +CKA N A
Sbjct: 120 RDGYETSGDGRSCTDVNECDMYGSCSQMCVNTDGSYTCSCVEGYVLQPDNKSCKAKNKPA 179
Query: 116 ---AFLIISNRHSILV------------------------------------ADLEEKGK 136
L++++ I V DL + K
Sbjct: 180 DRPPLLLVASPEMIEVLYLNGSRMSAWSPGKGSAVVTLDCSHGGDSLCWVESRDLSSQLK 239
Query: 137 DHRAQDIVVS----------GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL 186
R S L V+ +A DWI G+ Y++D RI VC +NG+ + L
Sbjct: 240 CSRIPKAATSPEEWAVSIAQNLHNVQQIAMDWITGNFYFVDHVSGRIFVCSQNGSVCVTL 299
Query: 187 AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 246
+ +++ PR + +DP+ G LF+TD+G ++ER MDG+NR+ I+ +KI P L LD
Sbjct: 300 IELDLSNPRAIAVDPTSGK--LFFTDYGNAAKVERCDMDGTNRTWIVDSKIEQPTALALD 357
Query: 247 IATRRVYFADSKLDFID 263
+ + VY+ D L+ ++
Sbjct: 358 LINKYVYWLDIYLETVE 374
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 137/304 (45%), Gaps = 61/304 (20%)
Query: 64 DSVTCQDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D Q N C+ G CSQ+C T + + C C GY L+ + CK I +FL+ S
Sbjct: 1807 DKAAQQGSNSCQLNNGGCSQLCLPTSETTRTCVCTVGYNLQKNRMACKGIE---SFLMYS 1863
Query: 122 NRHSILVADLEEKGK----------------DHRA------------------------- 140
I L+ K D A
Sbjct: 1864 VHEGIRGIPLDPNDKMDALMPISGASFAVGIDFHAGNDTIYWTDMGFNKISRAKRDQTWK 1923
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+DIV +GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + +
Sbjct: 1924 EDIVTNGLGRVEGIAVDWIAGNIYWTDHGFNLIEVARLNGSFRYVVISQGLDQPRSIAVH 1983
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +LFWT+WG++P I R +DGS + ++S I WPNG+++D ++Y+ D++ D
Sbjct: 1984 PEKG--YLFWTEWGQSPCIGRAHLDGSEKVVLVSLGIAWPNGISIDYEENKLYWCDARTD 2041
Query: 261 FIDCKSLE---------IKTNVNYSTIF---RKLYWIDEGGNGVPLKIGKANMDGSNASI 308
I+ LE +NV+ ++ +YW D ++ G N + ++A
Sbjct: 2042 KIERIDLESGGSREIVLSGSNVDMFSVAVFGAYIYWSDRAHANGSIRRGHKN-EATDAVT 2100
Query: 309 LVSG 312
+ +G
Sbjct: 2101 MRTG 2104
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 107/240 (44%), Gaps = 55/240 (22%)
Query: 77 PGYCSQMCT--NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA-DLEE 133
PG CS +C ++ + C C G++L D +CK + R I+ DL
Sbjct: 462 PGGCSHICLLGSSHKARTCRCRTGFILATDGRSCKRPKNELFLFYGKGRPGIIRGMDLNT 521
Query: 134 KGKDH-----------RAQD------------------------------IVVSGLDLVE 152
K D RA D I+ LD VE
Sbjct: 522 KMSDEYMIPIENLVNPRALDFHAESNYIYFADTTSFLIGRQKIDGTERETILKDDLDNVE 581
Query: 153 GLAYDWIGGHIYWL-DSRLNRIEVC--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
G+A DWIG ++YW D I V ++ +R L + +++ PRG+++DP G W++
Sbjct: 582 GIAVDWIGNNLYWTNDGHRKTIAVARLEKAAQSRKTLLEGDMSHPRGIVVDPVNG--WMY 639
Query: 210 WTDWGENP------RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
WTDW E+ RIE+ MDG +R +++K+ WPNGLTLD +Y+ D+ D I+
Sbjct: 640 WTDWEEDEIDASVGRIEKAWMDGYSRQVFVTSKMLWPNGLTLDYRANVLYWCDAYYDHIE 699
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 139/328 (42%), Gaps = 74/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLA----ECKHKFGLCSNT--CHPTPLGALCTCPP 57
+C+ + CD DC +G+DE C ++ C+ C + C+ T LC C P
Sbjct: 3751 KCIPMELQCDWFDDCGDGSDE-QDCKISIAEYTCEDNVNPCGDDAFCNQTKSSLLCQCKP 3809
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G + + C+D+NEC G CSQ C N KGSY C+C + Y + N++C A
Sbjct: 3810 GFQRNRRNRQCEDINECMVFGTCSQHCHNLKGSYRCACEKNY--KEKNNSCIAKGSEDQV 3867
Query: 118 LIISNRHSIL--------------VADLEEK----GKDHRAQ-DIVV------------- 145
L ++N IL ++ +E G D Q D++V
Sbjct: 3868 LYVANDTDILGFAYPFNYSDAHQQISHIEHNSRITGMDAYFQGDMIVWSTQFNPGGIFYR 3927
Query: 146 -----------SGLDLVE-----GLAYDWIGGHIYWLD-SRLN--------------RIE 174
SGL E G+A DW+ G+IYW D SR++ I
Sbjct: 3928 KLHDRERRQSNSGLICPEFKRPRGIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSIN 3987
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V G N L +P + ++P G ++WT G+ IE MDG+ R ++
Sbjct: 3988 VGQLKGPNCTRLLTSIAGEPYAIAVNPKKGM--MYWTVIGDRSHIEESSMDGTLRRILVQ 4045
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D ++R+++AD +L I
Sbjct: 4046 KNLQRPTGLVVDQFSQRLFWADFELSVI 4073
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 131/335 (39%), Gaps = 57/335 (17%)
Query: 75 EQPGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEE 133
E G CS MC N S C+C L D TC FL+ + R I D+E
Sbjct: 1514 EGRGPCSHMCLINHNRSAACACPHLMKLSSDKKTCY---ERKKFLLYARRSEIRGVDIEN 1570
Query: 134 KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
+ V +D V + +D + +YW D + I+ NGT + +I
Sbjct: 1571 PYFNFITA-FTVPDIDDVTVIDFDAVEERLYWTDVKTQTIKRAFINGTGLETIISRDIQS 1629
Query: 194 PRGMMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
RG+ +D +R L+W + + +I +DGS +++II
Sbjct: 1630 IRGLAVDWI--SRNLYWISSEFDETQINVAHLDGSLKTSII------------------- 1668
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+D C ++ + KLYW D GN I ANMDGSN+ IL
Sbjct: 1669 ----HGIDKPQCLAVH--------PVKGKLYWTD--GN----TINMANMDGSNSKILFQN 1710
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
Q + + L ++ G L+W G N I R +DG N I S K
Sbjct: 1711 Q-KDPVGLSIDYG---------ENKLYWISSG-NGTISRCNLDGGNLEIIESMKEELTKA 1759
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
L I +++++AD L I CN GR +L
Sbjct: 1760 TALTIMDKKLWWADQNLAQIGTCN-KKDGRNPTVL 1793
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 105/458 (22%), Positives = 174/458 (37%), Gaps = 86/458 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEG----PGCDLAECKHKFGLCSNTCHPTPLGALCT----CP 56
CV+ +CDG+ DCP+ +DE P +C F C T L LC C
Sbjct: 24 CVSWHWLCDGEPDCPDDSDESLDTCPEESDFKCSPNFISCIGTNKCIHLSQLCNGVYDCS 83
Query: 57 PGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH--- 113
G ++ V C+++ Q C C T+ C C +GY D +C +N
Sbjct: 84 DG---YDEGVHCRELLPRCQQMNCQHRCAITRNGTRCYCRDGYETSGDGRSCTDVNECDM 140
Query: 114 --SAAFLIISNRHSILVA-----DLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
S + + ++ S + L+ K +A++ L+ L
Sbjct: 141 YGSCSQMCVNTDGSYTCSCVEGYVLQPDNKSCKAKNKPADRPPLL--------------L 186
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226
+ IEV NG+ + + + LD S G L W +E +
Sbjct: 187 VASPEMIEVLYLNGSRMSAWSPGKGSAV--VTLDCSHGGDSLCW--------VESRDLSS 236
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWID 286
+ + I P + IA ++L + I Y++D
Sbjct: 237 QLKCSRIPKAATSPEEWAVSIA----------------QNLHNVQQIAMDWITGNFYFVD 280
Query: 287 EGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTRWLFWTDWG 344
V +I + +GS L+ L A+A+D +G L F+TD+G
Sbjct: 281 H----VSGRIFVCSQNGSVCVTLIELDLSNPRAIAVDPTSGKL-----------FFTDYG 325
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQ- 403
++ER MDG+NR+ I+ +KI P L LD+ + VY+ D L+ ++ +Y G RQ
Sbjct: 326 NAAKVERCDMDGTNRTWIVDSKIEQPTALALDLINKYVYWLDIYLETVEVVDYQGRRRQT 385
Query: 404 -----QVILIDLMVEFTNDL--MGDNGVPALALDLENG 434
Q+ + + F N L + + + L +D NG
Sbjct: 386 ITKGRQIRHLSGLAVFENYLYTINSDNLSILRIDRYNG 423
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E P I R + G N IIST I PNGLT+D ++YF+D L
Sbjct: 2306 ECQNLMFWTNWNEQLPSIMRSTLSGKNAHVIISTDILTPNGLTIDHRAEKLYFSDGSLGK 2365
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 2366 IERCEYDGSQRYVIV 2380
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 13/133 (9%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-----NRIEVCDENGTNR---IVLAKDNI 191
+ +++ + VEGLAY +YW S + ++ NR I +A+D+
Sbjct: 2239 GRKVLIENVGSVEGLAYHRAWDTLYWTSSTTSSITRHSVDQRRRGAFNREAVITMAEDD- 2297
Query: 192 TQPRGMMLDPSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
P + LD +FWT+W E P I R + G N IIST I PNGLT+D
Sbjct: 2298 -HPHVLALDEC--QNLMFWTNWNEQLPSIMRSTLSGKNAHVIISTDILTPNGLTIDHRAE 2354
Query: 251 RVYFADSKLDFID 263
++YF+D L I+
Sbjct: 2355 KLYFSDGSLGKIE 2367
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 26/157 (16%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I K ++ + S+LV G L +ALD + +L L+WTD E+ +I R +
Sbjct: 1248 EIRKIDLHKRDYSLLVPG-LRNTIALDFH----FSQSL-----LYWTDVVED-KIYRGKL 1296
Query: 355 DG----SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
S ++ + P GLT+D +Y+ DS LD I+ DGT R LI
Sbjct: 1297 SDTGGVSAIEVVVQHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGTLR--TTLIAG 1354
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
+E A+ALD G+L+++ A F +
Sbjct: 1355 AMEHPR---------AIALDPRYGILFWTDWDANFPR 1382
>gi|195149514|ref|XP_002015702.1| GL11210 [Drosophila persimilis]
gi|194109549|gb|EDW31592.1| GL11210 [Drosophila persimilis]
Length = 4617
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 149/307 (48%), Gaps = 51/307 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C+++ ++CDGK DC + DEG C C H CS+ CH TP G +C+CP L
Sbjct: 1145 QCISVDQLCDGKNDCEDTTDEGFLCADKLCDHGHE-CSHNCHNTPEGYICSCPDHLFLQP 1203
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
+ C + C+ CSQ+C + Y C C EG+ L YD TCK+ ++I +NR
Sbjct: 1204 NGKRCNMQHACDHWDTCSQVCQTSGKGYDCRCLEGFDLAYDKFTCKSTAPDEPYVIFTNR 1263
Query: 124 HSILVADL-------------------------------------------EEKGKDHRA 140
I +L E G+ R+
Sbjct: 1264 QDIKGINLKTMAVGTFYTSLRNIIALDFLYSNESSVEVYWTDVIDDKIYRGELVGESLRS 1323
Query: 141 QDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+ V+ SGL EGLA DW+G ++YW+DS L++IEV NG+ R L ++ PR + L
Sbjct: 1324 VEAVIHSGLSTTEGLAVDWVGKNLYWIDSNLDQIEVAKLNGSFRRTLIAGSMESPRAIAL 1383
Query: 200 DPSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIST---KIYWPNGLTLDIATRRVYFA 255
DP G LFWTDW +N PRIER M G R I ++ WPNGLTLD +RVY+
Sbjct: 1384 DPREGL--LFWTDWDDNSPRIERASMAGEGRRIISTSWQLSTGWPNGLTLDFTQKRVYWV 1441
Query: 256 DSKLDFI 262
D+K I
Sbjct: 1442 DAKSKSI 1448
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 191/412 (46%), Gaps = 87/412 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EILSN 63
C++ +CD + DC + +DE C++ EC +C + C +G C C PG ++L
Sbjct: 2911 CISADLLCDRRNDCADFSDE-ELCNVNECLIP-DICEHECVDKVVGYECLCRPGYKLLPK 2968
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
C D++EC + CSQ C NT GSY C C +GY L D+HTCKA ++ + LI SNR
Sbjct: 2969 SPHLCTDIDECHEQQPCSQTCVNTYGSYKCICAKGYAL-VDHHTCKATSNVSMELIFSNR 3027
Query: 124 HSILVADLEEKG---------------------------------------KDHRAQDIV 144
+ I ++E G ++R Q +
Sbjct: 3028 YYIRQVNMEGNGTILINELSNAVALDFDWDSQCLYWSDVTSTVGTIKRHCPAENRTQTLH 3087
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ L +GLA DW+ ++YW D L+ IEV +G R VL + + +PRG+ LDP
Sbjct: 3088 QTMLKNPDGLAVDWVAKNLYWCDKGLDTIEVSQLDGKYRKVLISEYLREPRGIALDPY-- 3145
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
R ++W+DWG+NP I + GMDGSN II + WPN LT+ T+++++ D++ D I
Sbjct: 3146 QRHIYWSDWGDNPHIGKAGMDGSNPRMIIRENLGWPNALTISFETQQLFWGDAREDTISV 3205
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
L+ GN L + ++ G N L+ A+ +
Sbjct: 3206 SDLD--------------------GNHTRLLLARSLNPGLN--------LHHIFAIAVWE 3237
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGM-DGSNRSTIISTKIYWPNGLTL 375
G +Y W+DW E IE M G N ST+++T I+ P L +
Sbjct: 3238 GRIY-----------WSDW-ETKSIEYCHMYSGQNCSTLLTT-IHRPMDLRV 3276
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 157/420 (37%), Gaps = 100/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ + CDGK DC +G+DE + C H G GA C ++L +
Sbjct: 2867 HCILKNQTCDGKMDCGDGSDEM----ASLCAHTRGCNGTDDFRCKNGA---CISADLLCD 2919
Query: 64 DSVTCQD--------MNECEQPGYCSQMCTNTKGSYICSCNEGY-VLEYDNHTCK----- 109
C D +NEC P C C + Y C C GY +L H C
Sbjct: 2920 RRNDCADFSDEELCNVNECLIPDICEHECVDKVVGYECLCRPGYKLLPKSPHLCTDIDEC 2979
Query: 110 ---------AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIG 160
+N ++ I + LV K + + +++ S + + +
Sbjct: 2980 HEQQPCSQTCVNTYGSYKCICAKGYALVDHHTCKATSNVSMELIFSNRYYIRQVNMEG-- 3037
Query: 161 GHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIE 220
NGT I + + LD ++ L+W+D
Sbjct: 3038 ------------------NGTILINELSNAVA------LDFDWDSQCLYWSDVTSTVGTI 3073
Query: 221 RIGMDGSNRS-TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIF 279
+ NR+ T+ T + P+GL +D +
Sbjct: 3074 KRHCPAENRTQTLHQTMLKNPDGLAVDW------------------------------VA 3103
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLF 339
+ LYW D+G + + + + +DG +L+S L E + L+ R ++
Sbjct: 3104 KNLYWCDKGLDTIEV----SQLDGKYRKVLISEYLREPRGIALDPYQ---------RHIY 3150
Query: 340 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
W+DWG+NP I + GMDGSN II + WPN LT+ T+++++ D++ D I + DG
Sbjct: 3151 WSDWGDNPHIGKAGMDGSNPRMIIRENLGWPNALTISFETQQLFWGDAREDTISVSDLDG 3210
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 122/325 (37%), Gaps = 101/325 (31%)
Query: 72 NECEQP-GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N CEQ G C Q+C S +C+C + L D +C+ + F SN SI + +
Sbjct: 2157 NPCEQSNGGCEQLCLYNGTSVVCACAHSH-LAADGLSCEPYENFLLFSYRSNIESIHMTE 2215
Query: 131 LEEKG-----------------------------------------KDHRAQDIVVSGLD 149
K + Q ++V+
Sbjct: 2216 HANKNWPVQLISNTSMMRNVIAITYNYEEQLVYYSDVQLSTINQVHFNGSGQRVLVAHQG 2275
Query: 150 LVEGLAYDWIGGHIYWLDSR------LNRIEVCDENGTN----RIVLAKDNITQPRGMML 199
VEGLAYD + ++W + L I + + N + VL+ +PRG+ +
Sbjct: 2276 RVEGLAYDIVNEQLFWTSNNDAAVRSLELIHLSQHSEQNLQHVKTVLSLQPKDKPRGITV 2335
Query: 200 DPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
+P G ++WT+W E +P I+R + G II + I PN LTLD+ +++Y+AD++
Sbjct: 2336 EPCLGM--IYWTNWNEESPSIQRAYLTGYGTEKIIRSDIKMPNALTLDLEEQKLYWADAR 2393
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
LD I+C N DGSN +L A
Sbjct: 2394 LDKIEC----------------------------------TNYDGSNRVVLAHSTPKHAF 2419
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDW 343
A M Y L LFWTDW
Sbjct: 2420 A------MAVYGDL-----LFWTDW 2433
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 156/375 (41%), Gaps = 68/375 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L++ CDG DC +DE CD + CS C TP G C CP G++ +
Sbjct: 85 ECLELSRFCDGHWDC--DSDE-LQCDKQDAACAAMNCSYNCKLTPRGPRCYCPGGQVPES 141
Query: 64 -DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN---HSAAFLI 119
+S C D +EC++PG C Q+C NT GSY CSC GY + C+AIN A L
Sbjct: 142 LNSTRCVDHDECQEPGTCDQLCRNTPGSYECSCVSGYD-KAKGGRCRAINVPSSEPATLT 200
Query: 120 ISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDEN 179
+ + S+L L+E + A+ GL V L H + + R NR ++
Sbjct: 201 LFSNGSVLHISLQELQANASAEKAAAGGLLSVLTLPQ----AHAFEVWHR-NRTICALQS 255
Query: 180 GTNRIVLAKDNITQPRGMMLDP-----SPGTRWL-FWTDWGENPRIERIGMDGSNRSTII 233
+ + L I +P+ P SP +L DW I
Sbjct: 256 SRDGLWLQCQRIDEPKANWTLPVSPLVSPKQSFLELHLDW-------------------I 296
Query: 234 STKIYWPN---GLTLDIATRRVYFADSKLDFI-DCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+ Y N GL T + F L+ + D +SL + Y +++ D
Sbjct: 297 AGNWYLLNKDHGLVF-FCTNTMLFCRLILEQVRDPESLALDPTKGY------MFYTDRTP 349
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
+ + ++ +DGSN + LV+ +Y + LDL N +Y W D E+
Sbjct: 350 S-----LSRSLLDGSNRTALVTTHIYHPNTVTLDLANEHVY-----------WVDVYED- 392
Query: 348 RIERIGMDGSNRSTI 362
IER+ +G R T+
Sbjct: 393 VIERVDYEGQRRWTL 407
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 147/352 (41%), Gaps = 70/352 (19%)
Query: 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
D + G+A DW+ G+IYW D++ N IEV +G++R V+ N+ +P + +DP G L
Sbjct: 1968 DWLGGIAIDWVAGNIYWSDTKRNLIEVSRLDGSHRYVVVA-NVEKPTVLAVDPLQGL--L 2024
Query: 209 FWTDWGENPRIERIGMDGSNRSTIIS-TKIYWPNG-LTLDIATRRVYFADSKLDFI---- 262
F+ I R+G+DGS +++ T+ W G L LDI +VY+ + D +
Sbjct: 2025 FYV---TQQHIGRVGLDGSQPFVLVNQTRTNWAVGSLVLDIEATKVYWCEQHPDALMKVD 2081
Query: 263 ---DCKSLEIKTNVNYSTIFRK----LYWIDEGGNGVPLKIGKANMDGSNASILVSGQ-- 313
+ + + +N K LYW + N +K+ + + +L + Q
Sbjct: 2082 YDGNLRQQLLNETLNNPVALAKMGDYLYWAENKYNEGAIKVAPLSNLTQSKLVLQTEQDA 2141
Query: 314 -----------------------------LYE--ALALDLENGMLYYSTLKCTRWLFWTD 342
LY ++ + L L C + +
Sbjct: 2142 IRDLKIYSKRIQRGNNPCEQSNGGCEQLCLYNGTSVVCACAHSHLAADGLSCEPYENFLL 2201
Query: 343 WGENPRIERIGM-DGSNRS---TIISTKIYWPN--GLTLDIATRRVYFADSKLDFIDFCN 396
+ IE I M + +N++ +IS N +T + + VY++D +L I+ +
Sbjct: 2202 FSYRSNIESIHMTEHANKNWPVQLISNTSMMRNVIAITYNYEEQLVYYSDVQLSTINQVH 2261
Query: 397 YDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKT 448
++G+G++ ++ VE LA D+ N L++++ +++
Sbjct: 2262 FNGSGQRVLVAHQGRVE------------GLAYDIVNEQLFWTSNNDAAVRS 2301
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ LD + LA DWI +Y +DSR N+I D G I L T P ++L+P
Sbjct: 3900 IPELDDPKSLAVDWITQRVYIIDSRHNKILATDIEGKKYISLVSTG-TNPTDIVLEPE-- 3956
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+R + W+ EN I +DGSN+ +++ + WP L++D T R+Y+AD + I+
Sbjct: 3957 SRIMIWSTL-EN-GILVASLDGSNKKSLVERDVGWPISLSMDYPTGRLYWADYRKGTIE 4013
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 334 CTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
C ++WT+W E +P I+R + G II + I PN LTLD+ +++Y+AD++LD I
Sbjct: 2338 CLGMIYWTNWNEESPSIQRAYLTGYGTEKIIRSDIKMPNALTLDLEEQKLYWADARLDKI 2397
Query: 393 DFCNYDGTGR 402
+ NYDG+ R
Sbjct: 2398 ECTNYDGSNR 2407
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 152/410 (37%), Gaps = 101/410 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG--CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + +CDG DC DE L +C+H C N C
Sbjct: 3702 CIRNSALCDGVNDCGTNEDESDQVCAALPKCRHDQFQCEND----------DCISKIFRC 3751
Query: 63 NDSVTCQDMNE---CEQP----GYCSQMCTNTK-GSYICSCNEGYVLEYD-NHTCKAINH 113
+ C D ++ C+ P G CSQ+C K G + C C EGY + N TC A
Sbjct: 3752 DGQYNCIDGSDEINCQPPVCGFGTCSQICIEKKAGHFNCKCAEGYHKGAEKNATCLASGP 3811
Query: 114 SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + + +++G V G + L D
Sbjct: 3812 DQILLLASEQEFRFILPSKQEG-------TTVVGFFQTDSLKIDVF-------------- 3850
Query: 174 EVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
D + +P+ +L FW D S+ +
Sbjct: 3851 ---------------DILIRPKDTLL---------FWID--------------SHHGKVH 3872
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
+ KI P+ ++ A RV +L + L+ ++ I +++Y ID N
Sbjct: 3873 TMKIATPH---VEAAGVRVRRDLKELTAFNIPELDDPKSLAVDWITQRVYIIDSRHN--- 3926
Query: 294 LKIGKANMDGSNASILVS-GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
KI +++G LVS G + L+ E+ ++ +STL EN I
Sbjct: 3927 -KILATDIEGKKYISLVSTGTNPTDIVLEPESRIMIWSTL------------EN-GILVA 3972
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
+DGSN+ +++ + WP L++D T R+Y+AD + I+ C +G R
Sbjct: 3973 SLDGSNKKSLVERDVGWPISLSMDYPTGRLYWADYRKGTIETCRLNGKDR 4022
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
E+LALD G ++F+TD P + R +DGSNR+ +++T IY PN +TL
Sbjct: 331 ESLALDPTKG-----------YMFYTD--RTPSLSRSLLDGSNRTALVTTHIYHPNTVTL 377
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGR 402
D+A VY+ D D I+ +Y+G R
Sbjct: 378 DLANEHVYWVDVYEDVIERVDYEGQRR 404
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 101/266 (37%), Gaps = 56/266 (21%)
Query: 111 INHSAAFLIISNRHSILVADLEEKGKDHRAQDI-------VVSGLDLVEGLAYDWIGGHI 163
+N A + R + + LEE + Q + + GL+ V +AYDWI H+
Sbjct: 572 VNVRAKSVFYVVRDDLDLGVLEEPSFSIKCQSLNGSVSRPLAHGLERVHSMAYDWINDHL 631
Query: 164 YWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIG 223
YW + ++ V ++++ T+ M +D P T L+WT W + I
Sbjct: 632 YWATNL--KLHVAPLRNMSQVLTFA---TECDAMSIDLDPTTGLLYWTQWSIQTCLAGIY 686
Query: 224 ---MDGSNRSTI----ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
MDG+++ + ++WP L +D T+R+Y+ DS I+
Sbjct: 687 SAWMDGTHKELLAKGTTEMPMHWPRSLDVDRRTKRIYWCDSLRGTIE------------- 733
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY-STLKCT 335
+ +DG+ +L+ + ++ N M+Y+ T +
Sbjct: 734 ---------------------RMRLDGTGREVLLKSDQFHPYSMVQHNAMIYWVGTKNSS 772
Query: 336 RWLFWTDWGENPRIERIGMDGSNRST 361
W F G + + + S RS
Sbjct: 773 IWRFHVHHGN--QTSTVHLQSSGRSA 796
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 171/460 (37%), Gaps = 96/460 (20%)
Query: 4 RCVNLTKVCDGKTDCP------NGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT--- 54
RC+ VCDG+ DCP G DEGP C G ++ P LCT
Sbjct: 2771 RCITQKWVCDGERDCPIGSDGQGGEDEGPQC---------GGIAHIPDCPPPAHLCTSGI 2821
Query: 55 CPPGEILSNDSVTC---QDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI 111
C + + + C D E +P Y C G+ + C +G+ + N TC
Sbjct: 2822 CIDSQYVCDGDEDCPGGDDEYEGCEPAYPQHACPG--GTQMHQCQDGHCI-LKNQTCDGK 2878
Query: 112 NHSAAFLIISNRHSILVADLE--EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
S+ + L A D R ++ DL+ D + D
Sbjct: 2879 MDCGDG---SDEMASLCAHTRGCNGTDDFRCKNGACISADLLCDRRNDCAD----FSDEE 2931
Query: 170 LNRI------EVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIG 223
L + ++C+ +++V + + +P +L SP TD E +
Sbjct: 2932 LCNVNECLIPDICEHECVDKVV-GYECLCRPGYKLLPKSPH----LCTDIDECHEQQPCS 2986
Query: 224 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLY 283
N T S K G L +D CK+ +NV+ IF Y
Sbjct: 2987 QTCVN--TYGSYKCICAKGYAL-------------VDHHTCKA---TSNVSMELIFSNRY 3028
Query: 284 WIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
+I + NM+G N +IL++ +L A+ALD + ++ L+W+D
Sbjct: 3029 YIRQ-----------VNMEG-NGTILIN-ELSNAVALDFDWD---------SQCLYWSDV 3066
Query: 344 GENPRIERIGMDGSNRS-TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
+ NR+ T+ T + P+GL +D + +Y+ D LD I+ DG R
Sbjct: 3067 TSTVGTIKRHCPAENRTQTLHQTMLKNPDGLAVDWVAKNLYWCDKGLDTIEVSQLDGKYR 3126
Query: 403 QQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ L+ E+ + G +ALD +Y+S G
Sbjct: 3127 KV-----LISEYLREPRG------IALDPYQRHIYWSDWG 3155
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
+FW+D +N I G+ II+T I P G +D R +YF+ + I C L
Sbjct: 1619 IFWSDIQQN-EISSAGISNGLIEPIINTNIEKPYGFAIDWIARHMYFSSGQ---IRCNIL 1674
Query: 268 EIKTNVNYSTIFR----------------KLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
Y T K+YWI + ++ ++N+DGS ++
Sbjct: 1675 ASNLKGEYVTHIHEDLNMVDSIALDPANGKMYWIHSAPDASLWQLEQSNLDGSGRLLIYE 1734
Query: 312 GQ-LYEALALDLENGMLYYS 330
+ ++L +D + LYY+
Sbjct: 1735 HEHTLQSLTMDFDAQRLYYA 1754
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 23/156 (14%)
Query: 267 LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGM 326
LE ++ Y I LYW LK+ A + + + +L +A+++DL+
Sbjct: 616 LERVHSMAYDWINDHLYW------ATNLKLHVAPLR-NMSQVLTFATECDAMSIDLD--- 665
Query: 327 LYYSTLKCTRWLFWTDWGENPRIERIG---MDGSNRSTI----ISTKIYWPNGLTLDIAT 379
T L+WT W + I MDG+++ + ++WP L +D T
Sbjct: 666 ------PTTGLLYWTQWSIQTCLAGIYSAWMDGTHKELLAKGTTEMPMHWPRSLDVDRRT 719
Query: 380 RRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFT 415
+R+Y+ DS I+ DGTGR+ ++ D ++
Sbjct: 720 KRIYWCDSLRGTIERMRLDGTGREVLLKSDQFHPYS 755
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 14/102 (13%)
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
+FW+D +N I G+ II+T I P G +D R +YF+ ++
Sbjct: 1619 IFWSDIQQN-EISSAGISNGLIEPIINTNIEKPYGFAIDWIARHMYFSSGQI-------- 1669
Query: 398 DGTGRQQVILIDLMVEFTNDLMGD-NGVPALALDLENGMLYY 438
R ++ +L E+ + D N V ++ALD NG +Y+
Sbjct: 1670 ----RCNILASNLKGEYVTHIHEDLNMVDSIALDPANGKMYW 1707
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 20/114 (17%)
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPNGLTLDIATRRVYFADS 387
T L+W D E I R+ DG+ R TI+ + W G+ +D +Y++D+
Sbjct: 1929 TDMLYWGD-NEVGSISRVKRDGTQRETILEAINLAGYKQQDWLGGIAIDWVAGNIYWSDT 1987
Query: 388 KLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTE 441
K + I+ DG+ R V+ VE LA+D G+L+Y T+
Sbjct: 1988 KRNLIEVSRLDGSHRYVVV---ANVEKPT---------VLAVDPLQGLLFYVTQ 2029
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA-KDNITQPRGMML 199
+ I+ + ++ G A DWI H+Y+ ++ R + N V +++ + L
Sbjct: 1640 EPIINTNIEKPYGFAIDWIARHMYFSSGQI-RCNILASNLKGEYVTHIHEDLNMVDSIAL 1698
Query: 200 DPSPGTRWLFWTDWGENP---RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
DP+ G ++W + ++E+ +DGS R +I + LT+D +R+Y+A
Sbjct: 1699 DPANGK--MYWIHSAPDASLWQLEQSNLDGSGR-LLIYEHEHTLQSLTMDFDAQRLYYA 1754
>gi|24641935|ref|NP_511151.2| yolkless, isoform A [Drosophila melanogaster]
gi|22832717|gb|AAF48349.2| yolkless, isoform A [Drosophila melanogaster]
Length = 1937
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 150/312 (48%), Gaps = 61/312 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADE------GPGCDLAECKHKFGLCSNTCHPTPL-GALCTCPP 57
C+ L++VCDG +DC +G+DE P CD +C CH P GA C CP
Sbjct: 281 CLTLSEVCDGHSDCSDGSDETDLCHSKPDCDAKKCA-----LGAKCHMMPASGAECFCPK 335
Query: 58 GEILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI----N 112
G L+ C+D++EC EQ CSQ C NT G Y C C+ GY+L+ DN TC+A+
Sbjct: 336 GFRLAKFEDKCEDVDECKEQDDLCSQGCENTSGGYRCVCDAGYLLDKDNRTCRAVVYGSK 395
Query: 113 HSAAFLIISNRHSILVADLEE--------------------------------------- 133
L+ + + +I+ L E
Sbjct: 396 EQQPLLLYTTQMTIMGMHLREDNVRNHVYQVAGNLSKVIGVAYDGSHIYWTNIQNEAESI 455
Query: 134 ---KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
G A+ ++ SGLD E LA DW+ +IY+ D+ + I VC +G N VL +
Sbjct: 456 VKANGDGSNAEILLTSGLDAPEDLAVDWLTQNIYFSDNIMRHIAVCSNDGLNCAVLVTQD 515
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ QPR + + P G +FWTDWGE P I R MDGS I+S I WPNG+ LD+ +
Sbjct: 516 VHQPRSLAVWPQKG--LMFWTDWGEKPMIGRASMDGSRSRPIVSDNIEWPNGIALDMHQQ 573
Query: 251 RVYFADSKLDFI 262
R+Y+ D+KL +
Sbjct: 574 RIYWVDAKLGSV 585
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 137/317 (43%), Gaps = 59/317 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFG--LCSNTCHPTPLGALCTCPPGEILS 62
CV+L++VC+ DC NG DEGP C A C+ G +C + C TP GA+C+C G L
Sbjct: 1352 CVDLSRVCNNFPDCTNGHDEGPKCATA-CRSASGRQVCQHKCRATPAGAVCSCFDGYRLD 1410
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D +C D++EC++ C+Q+C NT G Y C C+ ++L D +CK++ A L S
Sbjct: 1411 ADQKSCLDIDECQEQQPCAQLCENTLGGYQCQCHADFMLRQDRVSCKSLQSGATLLFSSF 1470
Query: 123 RHSILVADLEEK----GKDHRAQDIVVSGLDLV------------EGLAY---------- 156
V +L E+ A D ++G DL EG+ Y
Sbjct: 1471 NE---VRNLSEQPVMLNVAWSANDSRITGFDLAMHRQMGYFSAEDEGIVYQIDLQTKVIV 1527
Query: 157 -------------DWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDP 201
DW+ G++Y L S I+ C G RIV ++ PR +
Sbjct: 1528 RALGLPAPTKLSVDWVTGNVYVL-SGAQEIQACSFVGRMCGRIV----HVKSPRHVKHLA 1582
Query: 202 SPGTRWLFW------TDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
G + +G+ + I +DGS R ++ + LT D + +YF
Sbjct: 1583 VDGYHARIFYIVIRTEGYGQTSSEIHMARLDGSRRDMLLQRSESFMTALTTDPHQQLLYF 1642
Query: 255 ADSKLDFIDCKSLEIKT 271
D + ++ S +KT
Sbjct: 1643 VDQHMRTLERISYRLKT 1659
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 175/447 (39%), Gaps = 89/447 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAE--CKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + +CDG+ DC + +DE GC AE C + LC+N G L
Sbjct: 197 CIPIDFMCDGRPDCTDKSDEVAGCKQAEITCPGEGHLCAN---------------GRCLR 241
Query: 63 NDSVTCQDMNEC----EQPGYCSQMCTNTKGSYICSCNEGYVLEY---DNHT-------- 107
C +++C ++ G C +C KG ++C E + D H+
Sbjct: 242 RKQWVCDGVDDCGDGSDERG-CLNLCEPQKGKFLCRNRETCLTLSEVCDGHSDCSDGSDE 300
Query: 108 --------------------CKAINHSAAFLIISNRHSILVADLEEKGKD----HRAQDI 143
C + S A +A E+K +D D+
Sbjct: 301 TDLCHSKPDCDAKKCALGAKCHMMPASGAECFCPK--GFRLAKFEDKCEDVDECKEQDDL 358
Query: 144 VVSGLDLVEGLAYDWI--GGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
G + G Y + G++ D+R R V ++L +T GM L
Sbjct: 359 CSQGCENTSG-GYRCVCDAGYLLDKDNRTCRAVVYGSKEQQPLLLYTTQMT-IMGMHLRE 416
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
R + G ++ + DGS+ IYW N + + S +
Sbjct: 417 D-NVRNHVYQVAGNLSKVIGVAYDGSH--------IYWTNIQNEAESIVKANGDGSNAEI 467
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
+ L+ ++ + + +Y+ D + I + DG N ++LV+ +++ +L
Sbjct: 468 LLTSGLDAPEDLAVDWLTQNIYFSD----NIMRHIAVCSNDGLNCAVLVTQDVHQPRSLA 523
Query: 322 L--ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + G+ +FWTDWGE P I R MDGS I+S I WPNG+ LD+
Sbjct: 524 VWPQKGL-----------MFWTDWGEKPMIGRASMDGSRSRPIVSDNIEWPNGIALDMHQ 572
Query: 380 RRVYFADSKLDFIDFCNYDGTGRQQVI 406
+R+Y+ D+KL + DGTGR+ V+
Sbjct: 573 QRIYWVDAKLGSVQTVRPDGTGRRTVL 599
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 10/108 (9%)
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
R++ IV ++ G+A D IYW+D++L ++ +GT R + + P G+
Sbjct: 551 RSRPIVSDNIEWPNGIALDMHQQRIYWVDAKLGSVQTVRPDGTGRRTVLDGMLKHPYGLA 610
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNR------STIISTKIYWP 240
+ L+W+DW G + TI + IY P
Sbjct: 611 IFED----QLYWSDWATKSVHACHKFSGKDHRILAKDRTIYAVHIYHP 654
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 107/271 (39%), Gaps = 40/271 (14%)
Query: 27 GCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMN-------------- 72
GC+ A C H L P G C CP G L+ D C M
Sbjct: 663 GCENATCSHLCLLAE----PEIGGHSCACPDGMRLAPDHRRCMLMEKRQRLFIGLGQVLL 718
Query: 73 ECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE 132
E E + + + + C NE + Y+ IN S LII++ L+ LE
Sbjct: 719 EIEHTAFGRHQVSKSY-TLPCLINE---MVYNR-----INGS---LIIADNDQRLI--LE 764
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA-KDNI 191
+ + H + +V S L V LA+D + ++YW D+ IEV +R ++
Sbjct: 765 FQPESHESNVLVRSNLGNVSALAFDHLSRNLYWADTERAVIEVLSLQTRHRALIRFFPGQ 824
Query: 192 TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL--DIAT 249
P G+ + P+ G ++ + I++I + G + + + L D T
Sbjct: 825 EVPIGLTVMPAEGYLYVVLK-AKRHSHIDKIPLSGKGEQVHVFEDDLGDDDIKLVTDYET 883
Query: 250 RRVYFADSKLDFIDCKSLEIKTNVNYSTIFR 280
+ ++++DS L I + V +S IFR
Sbjct: 884 QTIFWSDSDLGRISYSNYR----VPHSQIFR 910
>gi|326671513|ref|XP_002663730.2| PREDICTED: low-density lipoprotein receptor-related protein 1-like
[Danio rerio]
Length = 1389
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 114/305 (37%), Positives = 149/305 (48%), Gaps = 52/305 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDGK DCP+G+DE CDL C + G CS+ C P G LC+CP G L
Sbjct: 250 CLPAEKLCDGKDDCPDGSDEKL-CDL--CSLENGGCSHNCTVAPGEGVLCSCPLGMELGT 306
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
++ TCQ C + CSQ C K + CSC EG+ LE D +C++ + F+I SNR
Sbjct: 307 NNKTCQIQGFCAKHLKCSQRCEQDKFNVKCSCYEGWALEPDMESCRSTDPFKPFIIFSNR 366
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 367 HEIRRIDLHKGEFSVLVPGLRNTIALDFHLNESSLYWTDVVEDKIYRGKLSENGAALTSF 426
Query: 142 DIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D+V+ GL EGLA DWI G+IYW++S L++IEV +GT R L ++ PR + LD
Sbjct: 427 DVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMRTTLLAGDVEHPRAIALD 486
Query: 201 PSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIY--WPNGLTLDIATRRVYFADS 257
P G LFWTDW + PRIE M G R TI WPNGLT+D RR+ + D+
Sbjct: 487 PREGI--LFWTDWDASMPRIEAASMSGHGRRTIHKETGSGGWPNGLTVDYLERRILWIDA 544
Query: 258 KLDFI 262
+ D I
Sbjct: 545 RSDAI 549
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 97/180 (53%), Gaps = 14/180 (7%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+DI+ +G+ VEG+A DWI G+IYW D + IEV NG+ R V+ + +PR + +
Sbjct: 1003 EDIITNGIGRVEGIAVDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVH 1062
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +LFWT+WG+ PRIER +DGS R+ +++ I WPNG+++D +Y+ D++ D
Sbjct: 1063 PERG--YLFWTEWGQYPRIERSRLDGSGRAVLVNVSISWPNGISIDYQDGLLYWCDARTD 1120
Query: 261 FIDCKSLEIKTN------------VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
I+ +LE N + S +YW D +K G + + S+
Sbjct: 1121 KIERINLETGENREVVLSSNNMDMFSVSVFENYIYWSDRTHANGSIKRGSKDNSTESVSL 1180
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 131/325 (40%), Gaps = 62/325 (19%)
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL----AKDNIT 192
D Q ++ + GL+ D+ H+YW+ S + I C +G+ VL K N
Sbjct: 821 DGTNQTMIFTNQKTPVGLSIDFDAEHLYWVSSGNSTINRCKLDGSGLEVLDSVKGKLNKA 880
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN-------RSTIISTKIYWPNGLTL 245
+M D L+W D G + DG N S +I KIY +
Sbjct: 881 SALAIMGDK------LWWADQGTDQIGTCDKSDGGNWKVLRNSTSGMIHMKIY-NETVQT 933
Query: 246 DIATRRVYF------------ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG----- 288
+ + +Y AD + + +++ +YW+D G
Sbjct: 934 GVGSFLLYSVHEGIRGIPLDPADKSDALVPVSGTSLAVGIDFHADNDTIYWVDMGLSTIS 993
Query: 289 -------------GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS----- 330
NG+ G A +D +I + Q ++ + + NG Y
Sbjct: 994 RAKRDQTWREDIITNGIGRVEGIA-VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQG 1052
Query: 331 -------TLKCTR-WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
T+ R +LFWT+WG+ PRIER +DGS R+ +++ I WPNG+++D +
Sbjct: 1053 LDKPRAITVHPERGYLFWTEWGQYPRIERSRLDGSGRAVLVNVSISWPNGISIDYQDGLL 1112
Query: 383 YFADSKLDFIDFCNYDGTGRQQVIL 407
Y+ D++ D I+ N + ++V+L
Sbjct: 1113 YWCDARTDKIERINLETGENREVVL 1137
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 130/332 (39%), Gaps = 58/332 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N ++ C+C L DNHTC S FL+ + + I D+
Sbjct: 638 GPCSHLCLINYNQTFSCACPHLMRLREDNHTCY---ESRQFLLYARQIEIRGVDIHNPYY 694
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V + YD + IYW D R I+ NGT + +I G
Sbjct: 695 NYIIS-FTVPDIDNVTVVDYDALERRIYWSDVRTQTIKRAFINGTGIETVVSADIPNAHG 753
Query: 197 MMLDPSPGTRWLFWTDW-GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + G +I +DGS ++ +I
Sbjct: 754 LAVDWV--SRNLFWTSYDGNKKQINVARLDGSFKNAVI---------------------- 789
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
LD C L + KLYW D G N I AN DG+N +++ + Q
Sbjct: 790 -QGLDKPHCLVLH--------PVLGKLYWTD-GDN-----ISMANTDGTNQTMIFTNQKT 834
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
L++D + LY W G N I R +DGS + S K
Sbjct: 835 PVGLSIDFDAEHLY-----------WVSSG-NSTINRCKLDGSGLEVLDSVKGKLNKASA 882
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
L I ++++AD D I C+ G +V+
Sbjct: 883 LAIMGDKLWWADQGTDQIGTCDKSDGGNWKVL 914
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 27/150 (18%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP----RIE 350
+I + ++ S+LV G L +ALD L S+L +WTD E+ ++
Sbjct: 368 EIRRIDLHKGEFSVLVPG-LRNTIALDFH---LNESSL------YWTDVVEDKIYRGKLS 417
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
G ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 418 ENGAALTSFDVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMR-------- 469
Query: 411 MVEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD G+L+++
Sbjct: 470 ----TTLLAGDVEHPRAIALDPREGILFWT 495
>gi|195044271|ref|XP_001991788.1| GH12853 [Drosophila grimshawi]
gi|193901546|gb|EDW00413.1| GH12853 [Drosophila grimshawi]
Length = 2095
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 109/334 (32%), Positives = 161/334 (48%), Gaps = 56/334 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGA-LCTCPPGEILSN 63
CV+ VCDG+ DCP G DE C + + + C C T G C C G +++
Sbjct: 591 CVHQKHVCDGQNDCPLGEDE-VNCPVEQKCPEPKQCEQLCIRTARGRDECACRLGYLMNT 649
Query: 64 DSVTCQDMNECE--QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+ C D++EC+ CSQ C NT GS++CSC GY+L D TCKA+ A L+++
Sbjct: 650 NKRNCTDIDECQYLTSPVCSQKCHNTMGSFVCSCEMGYILRPDLRTCKALG-GAMTLLVA 708
Query: 122 NR--------------------HSILVADLE-EKG-----------------KDHRAQDI 143
NR H+ + D KG R +D+
Sbjct: 709 NRWDIRRVTLSNNRYMAIVKGLHNAIALDFHYRKGMMFWSDVSTDVIKMVYVNGTRVRDV 768
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ GL+ G+A DW+ ++W DS R+EV + G R V+ ++ +PR +++ P
Sbjct: 769 IKWGLESPGGIAVDWVHDLLFWTDSGTRRVEVANFQGNLRTVIVSSDLDKPRAIVI--HP 826
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +FW+DWG NP+IER MDGS R IIS + WPNGL +D ++Y+AD+K I+
Sbjct: 827 GEALVFWSDWGPNPKIERAHMDGSQRQVIISKGVTWPNGLAIDYPNSKIYWADAKQHAIE 886
Query: 264 CKSLEIKTNVNY----------STIFR-KLYWID 286
C +L+ + TIF +YW D
Sbjct: 887 CSNLDGSERIKVLSSHLPHPFALTIFEDTMYWTD 920
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 151/361 (41%), Gaps = 71/361 (19%)
Query: 38 GLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC------EQPGYCSQMCTNTKGSY 91
G CS+ C P L C CP G L +D TC+ + + Q+ T + G
Sbjct: 974 GGCSHLCLPNRLSRRCGCPIGLSLKDDGKTCKSAPDKLVLVARRKDIRLRQLNTKSFGP- 1032
Query: 92 ICSCNE-GYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG--KDH----RAQDIV 144
NE ++ DN + H+ A S I D+E K H Q +V
Sbjct: 1033 ----NEVDMIVPLDN-----LKHAVALDWCSETDFIYWTDVERSSINKAHLNGSYQQRVV 1083
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
S L GLA DWI +YW D NRIEV NG R +L + + +PR ++++P G
Sbjct: 1084 HSNLVSPVGLALDWITDKLYWTDPSTNRIEVATTNGKMRTLLVWEKLDKPRDIVVNPIDG 1143
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
+FW+DWGE IER MDG++R I S K+ WPNGL +D ++YF D
Sbjct: 1144 L--MFWSDWGEEAMIERANMDGASRVIIASKKLIWPNGLAIDYDQHKLYFVDGGT----- 1196
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
K+LE N DGS+ ++++G L LD+
Sbjct: 1197 KTLE-----------------------------NMNFDGSSRKVIING-LGHPFGLDVSG 1226
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384
G +Y WTDW + M G N +T+I+ + + RRVY
Sbjct: 1227 GRVY-----------WTDWDTKSAMSADKMTGKNVATVIANSSDLMDIRVFHRSRRRVYN 1275
Query: 385 A 385
A
Sbjct: 1276 A 1276
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 139/322 (43%), Gaps = 62/322 (19%)
Query: 72 NECEQP-GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK--------------------- 109
N C++ G CS +C S+ C+C G L+ D TC
Sbjct: 1275 NACDKRNGGCSHLCLLNPTSFTCACAVGVQLKEDRRTCSEGPTKYILFAHRIDIRQISLD 1334
Query: 110 ------------AINHSAAFLIISNRHSILVADLEEKGKDHRAQD------IVVSGLDLV 151
I+++ A + I +D E + D ++ L+
Sbjct: 1335 FDHLIDVVLPLPPISNAVALDVDQKTGYIFWSDTIENVIMSSSPDGLHVHKVIGESLENP 1394
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
+GL D IG IYW D+ + IEV +G +R V+A ++ PRG+ LD G LFWT
Sbjct: 1395 DGLVVDSIGRTIYWADAGRHTIEVATLDGRHRHVIAYKDLESPRGLALDYEAGL--LFWT 1452
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID-CKSLEIK 270
DWG +IER +DG+ RS I++ + WPNGL+LD+ ++R+Y+ D++L ID C +
Sbjct: 1453 DWGHYRKIERSHLDGNERSRIVTANLGWPNGLSLDLKSKRIYWVDARLKTIDSCDYTGNQ 1512
Query: 271 TNVNYSTIFRK---------LYWIDEGGNGVPLKIGK---------ANMDG-SNASILVS 311
+ S + +YW D + + + N+DG + ++V
Sbjct: 1513 RKLIMSALHHPYALALTSDYIYWTDWKSKALHMADRRNTSAKRDVMTNIDGLMDIKVIVK 1572
Query: 312 GQLYEALALDLENGMLYYSTLK 333
QL A DL NG + L+
Sbjct: 1573 HQLLTENACDLNNGGCSHLCLR 1594
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 173/446 (38%), Gaps = 104/446 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT--------- 54
RC+ T +CDG DC + DE C L C LC + T L +C
Sbjct: 545 RCILRTWLCDGYPDCSSAEDE-VDCHLL-CDAGQFLCPAKKNITNL-KICVHQKHVCDGQ 601
Query: 55 --CPPGEILSNDSVTCQDMNECEQPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTC--- 108
CP GE D V C +C +P C Q+C T +G C+C GY++ + C
Sbjct: 602 NDCPLGE----DEVNCPVEQKCPEPKQCEQLCIRTARGRDECACRLGYLMNTNKRNCTDI 657
Query: 109 -------------KAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLA 155
K N +F+ IL DL R + + L+
Sbjct: 658 DECQYLTSPVCSQKCHNTMGSFVCSCEMGYILRPDL-------RTCKALGGAMTLLVANR 710
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
+D I + NR + N I L + +GMM FW+D
Sbjct: 711 WD-----IRRVTLSNNRYMAIVKGLHNAIAL---DFHYRKGMM----------FWSDVST 752
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNY 275
+ I+ + ++G+ +I + P G+ +D
Sbjct: 753 DV-IKMVYVNGTRVRDVIKWGLESPGGIAVDW---------------------------- 783
Query: 276 STIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCT 335
+ L+W D G V + AN G+ +++VS L + A+ + G
Sbjct: 784 --VHDLLFWTDSGTRRVEV----ANFQGNLRTVIVSSDLDKPRAIVIHPGEAL------- 830
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+FW+DWG NP+IER MDGS R IIS + WPNGL +D ++Y+AD+K I+
Sbjct: 831 --VFWSDWGPNPKIERAHMDGSQRQVIISKGVTWPNGLAIDYPNSKIYWADAKQHAIECS 888
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ R +V+ L F + D
Sbjct: 889 NLDGSERIKVLSSHLPHPFALTIFED 914
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 128/274 (46%), Gaps = 31/274 (11%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYI 92
C G CS+ C P G C CP G L +S T CE + G +
Sbjct: 1581 CDLNNGGCSHLCLRNPSGFTCQCPTGLKLRENSTTI-----CENLPNDYLLIALRSGIGM 1635
Query: 93 CSCNEGYVLEYDNHTCKAIN--HSAAFLIISNRHSILV-AD-----LEEKGKDHRAQDIV 144
S N G ++ IN H A L R S+L AD + + + V
Sbjct: 1636 ISLNSGDYMD----VVLPINGVHGAVVLDFHFRKSLLFFADVNLDIIRRVNLLNFTESKV 1691
Query: 145 VSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
V +L+ G+A DW+ ++YW D+ IEV +G+ R L +++ PR +++ PS
Sbjct: 1692 VVSTELLTPNGIAVDWVADNLYWSDTDRKLIEVARIDGSCRKKLITEDLGDPRSLIIHPS 1751
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+LFW+DW +IER +DGSNR+ I+++ + +P GLT+D A RR+ +AD+ D I
Sbjct: 1752 KA--YLFWSDWNSPSKIERSFLDGSNRTAIVTSGVGFPTGLTIDFANRRLLWADALEDNI 1809
Query: 263 ---DCKSLEIKTNVNYS------TIFRK-LYWID 286
D +T V Y+ T+F +YW D
Sbjct: 1810 GQVDFNGKRRQTIVPYAPHPFGLTMFESNIYWTD 1843
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 131/331 (39%), Gaps = 93/331 (28%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C + S C C G L+ D TCK+ ++++ R I + L K
Sbjct: 974 GGCSHLCLPNRLSRRCGCPIGLSLKDDGKTCKSA--PDKLVLVARRKDIRLRQLNTKSFG 1031
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
D++V +L +A DW C E
Sbjct: 1032 PNEVDMIVPLDNLKHAVALDW-----------------CSE------------------- 1055
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
T +++WTD E I + ++GS + ++ + + P GL LD T
Sbjct: 1056 -------TDFIYWTDV-ERSSINKAHLNGSYQQRVVHSNLVSPVGLALDWITD------- 1100
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KLYW D N +I A +G ++LV +L +
Sbjct: 1101 -----------------------KLYWTDPSTN----RIEVATTNGKMRTLLVWEKLDKP 1133
Query: 318 --LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
+ ++ +G++ FW+DWGE IER MDG++R I S K+ WPNGL +
Sbjct: 1134 RDIVVNPIDGLM-----------FWSDWGEEAMIERANMDGASRVIIASKKLIWPNGLAI 1182
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
D ++YF D ++ N+DG+ R+ +I
Sbjct: 1183 DYDQHKLYFVDGGTKTLENMNFDGSSRKVII 1213
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 44/189 (23%)
Query: 219 IERIGM-DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST 277
I R+ + + + ++ST++ PNG+ +D +Y++D+
Sbjct: 1678 IRRVNLLNFTESKVVVSTELLTPNGIAVDWVADNLYWSDTD------------------- 1718
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRW 337
RKL I A +DGS L++ L + +L + Y
Sbjct: 1719 --RKL-------------IEVARIDGSCRKKLITEDLGDPRSLIIHPSKAY--------- 1754
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
LFW+DW +IER +DGSNR+ I+++ + +P GLT+D A RR+ +AD+ D I ++
Sbjct: 1755 LFWSDWNSPSKIERSFLDGSNRTAIVTSGVGFPTGLTIDFANRRLLWADALEDNIGQVDF 1814
Query: 398 DGTGRQQVI 406
+G RQ ++
Sbjct: 1815 NGKRRQTIV 1823
>gi|195355477|ref|XP_002044218.1| GM22597 [Drosophila sechellia]
gi|194129507|gb|EDW51550.1| GM22597 [Drosophila sechellia]
Length = 1980
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 167/379 (44%), Gaps = 88/379 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGA-LCTCPPGEILSN 63
CV+ +CDG +CP G DE +C C C T G C C G ++
Sbjct: 499 CVHQKHICDGHNECPAGEDEADCPKERKCSEP-SPCEQLCIETTAGLNECACRLGYVMDK 557
Query: 64 DSVTCQDMNECE--QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+ V C D++EC+ CSQ C NT GS+ CSC GY+L D +CKA+ + L+ +
Sbjct: 558 NKVNCTDIDECQYLTSPVCSQKCHNTMGSFKCSCETGYILRPDLRSCKALGGAMTLLVAN 617
Query: 122 -----------NRHSILVADLE---------EKG-----------------KDHRAQDIV 144
NR++ +V L KG R +D++
Sbjct: 618 RWDIRRVTLSNNRYTAIVKGLHNAIALDFHHRKGLMFWSDVSTDVIKMVYMNGTRVRDVI 677
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
GL+ G+A DWI ++W DS R+EV + G R V+A ++ +PR +++ PG
Sbjct: 678 KWGLESPGGIAVDWIHDLLFWTDSGTRRVEVSNFQGNLRTVIASYDLDKPRAIVV--HPG 735
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
FW+DWG NP+IER MDG+ R IIS + WPNGL +D ++Y+AD+K I+C
Sbjct: 736 EALAFWSDWGPNPKIERAYMDGTQRKVIISKGVTWPNGLAIDFPNSKIYWADAKQHAIEC 795
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
+N+DGS+ + ++S L AL L
Sbjct: 796 ----------------------------------SNLDGSDRNKILSTHLPHPFALTLFE 821
Query: 325 GMLYYSTLKCTRWLFWTDW 343
+Y WTDW
Sbjct: 822 DTMY-----------WTDW 829
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 141/356 (39%), Gaps = 91/356 (25%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA--------------------------- 110
G CS +C K S C C G L+ D TCK+
Sbjct: 882 GGCSHLCLPNKTSRRCGCPIGLSLKEDGKTCKSTADKLVLVARRKDIRLRHLRDNQADPN 941
Query: 111 ----------INHSAAFLIISNRHSILVADLEEK--GKDH----RAQDIVVSGLDLVEGL 154
+ H+ A S+ I D+E K H Q +V S L GL
Sbjct: 942 DVDMIVPLDNLKHAVALDWCSDTDFIYWTDVERSTINKAHLNGSYQQRVVHSNLVSPVGL 1001
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DWI +YW D NRIEV NG R +L + + +PR ++++P G ++FW+DWG
Sbjct: 1002 ALDWITDKLYWTDPSTNRIEVATTNGKMRTLLIWEKLYKPRDIVVNPIEG--FMFWSDWG 1059
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
++P IER MDG R TI S K+ +PNGL +D ++YF D K+LE
Sbjct: 1060 DDPMIERANMDGHERVTITSKKLIYPNGLAIDYEKSKIYFVDGGT-----KTLE------ 1108
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
N DGS ++++G L LD+ G
Sbjct: 1109 -----------------------NMNFDGSGRQVILNG-LGHPFGLDVNEGR-------- 1136
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 390
+FWTDW + + G + + II+ + RR++ A KL+
Sbjct: 1137 ---VFWTDWDTKSVMSANKLTGKDTNVIIANSTDLMDIRVFHRTRRRIFNACDKLN 1189
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 110/233 (47%), Gaps = 42/233 (18%)
Query: 71 MNECEQ-PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK-------------------- 109
N C++ G CS +C SY C+C G L+ D HTC
Sbjct: 1182 FNACDKLNGGCSHLCLLNPTSYTCACTVGVQLKEDRHTCSEGPTQYILFAHRIDIRQISL 1241
Query: 110 -------------AINHSAAFLIISNRHSILVAD------LEEKGKDHRAQDIVVSGLDL 150
I+++ A + I +D + Q IV L+
Sbjct: 1242 DFDHLIDVVLPLPPISNAVALDVDRKTGYIYWSDTIENVIMSSSPDGLHVQKIVGDSLEN 1301
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
+GL D IG IYW D+ + IEV +G+NR V+A ++ PRG+ LD G LFW
Sbjct: 1302 PDGLVVDSIGRTIYWADAGRHTIEVASLDGSNRHVIAYKDLESPRGLALDYEAGL--LFW 1359
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
TDWG +IER +DG+ RS I++ + WPNGL+LD+ ++R+Y+ D++L ID
Sbjct: 1360 TDWGHYRKIERSHLDGNERSRIVTANLGWPNGLSLDLKSKRIYWVDARLKTID 1412
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 172/449 (38%), Gaps = 110/449 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGP---GCDLAE--CKHK-----FGLCSNTCHPTPLGALC 53
RC+ T +CDG DC G DE CDL + C K +C + H +C
Sbjct: 453 RCILKTWLCDGYPDCAAGEDEVECHLQCDLGQFLCPTKQNLTNLKICVHQKH------IC 506
Query: 54 ----TCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTC 108
CP GE D C +C +P C Q+C T G C+C GYV++ + C
Sbjct: 507 DGHNECPAGE----DEADCPKERKCSEPSPCEQLCIETTAGLNECACRLGYVMDKNKVNC 562
Query: 109 ----------------KAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVE 152
K N +F IL DL R+ + + L+
Sbjct: 563 TDIDECQYLTSPVCSQKCHNTMGSFKCSCETGYILRPDL-------RSCKALGGAMTLLV 615
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
+D I + NR + N I L + +G+M FW+D
Sbjct: 616 ANRWD-----IRRVTLSNNRYTAIVKGLHNAIAL---DFHHRKGLM----------FWSD 657
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN 272
+ I+ + M+G+ +I + P G+ +D
Sbjct: 658 VSTDV-IKMVYMNGTRVRDVIKWGLESPGGIAVDW------------------------- 691
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
I L+W D G V + +N G+ +++ S L + A+ + G
Sbjct: 692 -----IHDLLFWTDSGTRRVEV----SNFQGNLRTVIASYDLDKPRAIVVHPGEAL---- 738
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
FW+DWG NP+IER MDG+ R IIS + WPNGL +D ++Y+AD+K I
Sbjct: 739 -----AFWSDWGPNPKIERAYMDGTQRKVIISKGVTWPNGLAIDFPNSKIYWADAKQHAI 793
Query: 393 DFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+ N DG+ R +++ L F L D
Sbjct: 794 ECSNLDGSDRNKILSTHLPHPFALTLFED 822
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 129/267 (48%), Gaps = 33/267 (12%)
Query: 41 SNTCHPTPLGALCTCPPGEILSNDSVT-CQDMNECEQPGYCSQMCTNTKGSYICSCNEGY 99
S+ C P G C CP G L +S T CQ++ E Y + G + S N G
Sbjct: 1470 SHLCLRNPSGYSCQCPIGLRLRQNSTTQCQNLPE----DYL--LIALRSGIGMISLNSGD 1523
Query: 100 VLEYDNHTCKAIN--HSAAFLIISNRHSILV-AD-----LEEKGKDHRAQDIVVSGLDLV 151
++ IN H A L R ++L AD + + + V+ G D++
Sbjct: 1524 FMD----VVLPINGVHGAVVLDYHYRKNLLFFADVNLDVIRRVNLLNLTESKVIVGTDVL 1579
Query: 152 --EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
G+A DWI ++YW D+ IEV +G+ R + +DN+ PR +++ P +LF
Sbjct: 1580 TPNGIAVDWIADNLYWSDTDRKLIEVSRLDGSCRKRIVEDNLGDPRSLIVHPKKA--YLF 1637
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI---DCKS 266
W+DW +IER +DGSNR+ II++ I +P GLT+D RR+ +AD+ D I D
Sbjct: 1638 WSDWSSPAKIERSYLDGSNRTVIITSGIGFPTGLTIDFTNRRLLWADALEDNIGQVDFNG 1697
Query: 267 LEIKTNVNYS------TIFR-KLYWID 286
+T V Y+ T+F ++W D
Sbjct: 1698 KRRQTIVPYAPHPFGLTLFENSIFWTD 1724
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 29/181 (16%)
Query: 242 GLTLDIATRR--VYFADSKLDFIDCKSL----EIKTNVNYST----------IFRKLYWI 285
+ LD R+ ++FAD LD I +L E K V I LYW
Sbjct: 1537 AVVLDYHYRKNLLFFADVNLDVIRRVNLLNLTESKVIVGTDVLTPNGIAVDWIADNLYWS 1596
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
D + + + +DGS +V L + +L + Y LFW+DW
Sbjct: 1597 DTDRKLIEV----SRLDGSCRKRIVEDNLGDPRSLIVHPKKAY---------LFWSDWSS 1643
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+IER +DGSNR+ II++ I +P GLT+D RR+ +AD+ D I +++G RQ +
Sbjct: 1644 PAKIERSYLDGSNRTVIITSGIGFPTGLTIDFTNRRLLWADALEDNIGQVDFNGKRRQTI 1703
Query: 406 I 406
+
Sbjct: 1704 V 1704
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 134/319 (42%), Gaps = 41/319 (12%)
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
H I L GLA D+ IY++D +E + +G+ R V+ + + P G
Sbjct: 1072 HERVTITSKKLIYPNGLAIDYEKSKIYFVDGGTKTLENMNFDGSGRQVIL-NGLGHPFG- 1129
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LD + G +FWTDW + + G + + II+ + RR++ A
Sbjct: 1130 -LDVNEGR--VFWTDWDTKSVMSANKLTGKDTNVIIANSTDLMDIRVFHRTRRRIFNACD 1186
Query: 258 KLDFIDCKSLEIKTNVNYS---TIFRKL----YWIDEG-------GNGVPLKIGKANMDG 303
KL+ C L + +Y+ T+ +L + EG + + ++ + D
Sbjct: 1187 KLNG-GCSHLCLLNPTSYTCACTVGVQLKEDRHTCSEGPTQYILFAHRIDIRQISLDFDH 1245
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+L + A+ALD++ + T +++W+D EN I DG + I+
Sbjct: 1246 LIDVVLPLPPISNAVALDVD---------RKTGYIYWSDTIENV-IMSSSPDGLHVQKIV 1295
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNG 423
+ P+GL +D R +Y+AD+ I+ + DG+ R + DL
Sbjct: 1296 GDSLENPDGLVVDSIGRTIYWADAGRHTIEVASLDGSNRHVIAYKDL-----------ES 1344
Query: 424 VPALALDLENGMLYYSTEG 442
LALD E G+L+++ G
Sbjct: 1345 PRGLALDYEAGLLFWTDWG 1363
>gi|241848581|ref|XP_002415648.1| lipophorin receptor, putative [Ixodes scapularis]
gi|215509862|gb|EEC19315.1| lipophorin receptor, putative [Ixodes scapularis]
Length = 1001
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 178/410 (43%), Gaps = 95/410 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAE---CKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
C+ VC+G DCP+ +DE C+ C + C T G C+C G L
Sbjct: 180 CIVERLVCNGVPDCPDRSDESQNTTCKSSTPCREDGFPCQHQCMATATGQRCSCKEGYQL 239
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+ D +C D++EC G CSQ C NT S+ C C +GY L D CKA A++I +
Sbjct: 240 APDGRSCLDVDECTYEGTCSQSCVNTVPSFQCLCKQGYRLRDDKRHCKA-QGPEAYVIFA 298
Query: 122 N------------RHSILVADLEE-----------------------------KGKDHRA 140
N ++ +VA L+ G D R
Sbjct: 299 NGADIRRITMDKSEYTSVVAKLQNAVALDYHFTLDLVFWSDITVDVIRSCSLTNGTDLRT 358
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+V GL GLA DWI +YW DS +R+E D +G NR L ++ +PR ++L
Sbjct: 359 --LVSRGLANPGGLAVDWIMNRVYWTDSGTSRVESVDLDGRNRRALVWKDLDKPRAIVLY 416
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P T ++WTDWG PRIERI DGS+R +I+ T ++WPNGLT+D A+ R+++AD+K
Sbjct: 417 PQLST--VYWTDWGARPRIERIYTDGSDRRSIVDTSLFWPNGLTIDYASDRIFWADAKHH 474
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
++ A++DGSN L+ L A+
Sbjct: 475 ----------------------------------QLESADLDGSNRKKLIESGLPHPFAV 500
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 370
+ LY WTDW + I G + +++ K+ +P
Sbjct: 501 TIFEDTLY-----------WTDW-QTKSIHTASKFGHQQPSVLYPKLSYP 538
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 109/233 (46%), Gaps = 12/233 (5%)
Query: 40 CSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQ--PGYCSQMCTNTKGSYICSCNE 97
CS+ C A C CP G L D +C + G M + + S
Sbjct: 557 CSHICVSNNESATCACPSGLNLLQDGTSCMERENRRSIIAGLDGLMNIHV---FHRSRPL 613
Query: 98 GYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYD 157
G LE ++ + + ++RH + D E + +D++ GLD + GLA D
Sbjct: 614 GDTLELHVYS-TWLREKEIYYADADRHVVQSCDTEGR----HVRDVISFGLDTLGGLAVD 668
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP 217
+G +YW DS + IEV + +G NR VL ++ PR + L G +FWTDWG
Sbjct: 669 SVGRKLYWSDSDRSLIEVSELDGRNRHVLFWKDVDSPRAIALHYEKGV--MFWTDWGNKI 726
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
RIE MDG NR ++ + WP+GL +D R+ +AD+K D I+ L+ K
Sbjct: 727 RIETADMDGDNRMNLVHDGLGWPHGLAIDKQGSRLIWADAKQDVIESVGLDGK 779
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 110/217 (50%), Gaps = 28/217 (12%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL----EIKTNVN 274
I RI MD S +++++ K+ L V+++D +D I SL +++T V+
Sbjct: 303 IRRITMDKSEYTSVVA-KLQNAVALDYHFTLDLVFWSDITVDVIRSCSLTNGTDLRTLVS 361
Query: 275 YST----------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
I ++YW D G + ++ ++DG N LV L D
Sbjct: 362 RGLANPGGLAVDWIMNRVYWTDSGTS----RVESVDLDGRNRRALVWKDL------DKPR 411
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384
++ Y L ++WTDWG PRIERI DGS+R +I+ T ++WPNGLT+D A+ R+++
Sbjct: 412 AIVLYPQLST---VYWTDWGARPRIERIYTDGSDRRSIVDTSLFWPNGLTIDYASDRIFW 468
Query: 385 ADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
AD+K ++ + DG+ R+++I L F + D
Sbjct: 469 ADAKHHQLESADLDGSNRKKLIESGLPHPFAVTIFED 505
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 39/214 (18%)
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT-------RRVYFADSKLDFI---DC 264
EN R G+DG + P G TL++ + +Y+AD+ + D
Sbjct: 589 ENRRSIIAGLDGLMNIHVFHRSR--PLGDTLELHVYSTWLREKEIYYADADRHVVQSCDT 646
Query: 265 KSLEIKTNVNYS----------TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
+ ++ +++ ++ RKLYW D + + + + +DG N +L +
Sbjct: 647 EGRHVRDVISFGLDTLGGLAVDSVGRKLYWSDSDRSLIEV----SELDGRNRHVLFWKDV 702
Query: 315 --YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
A+AL E G++ FWTDWG RIE MDG NR ++ + WP+G
Sbjct: 703 DSPRAIALHYEKGVM-----------FWTDWGNKIRIETADMDGDNRMNLVHDGLGWPHG 751
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
L +D R+ +AD+K D I+ DG R+ ++
Sbjct: 752 LAIDKQGSRLIWADAKQDVIESVGLDGKNRRVLV 785
>gi|194894101|ref|XP_001978008.1| GG17929 [Drosophila erecta]
gi|190649657|gb|EDV46935.1| GG17929 [Drosophila erecta]
Length = 2009
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 167/379 (44%), Gaps = 88/379 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGA-LCTCPPGEILSN 63
CV+ +CDG +CP G DE +C C C T G C C G ++
Sbjct: 499 CVHQKHICDGHNECPAGEDEADCPKERKCSEP-SPCEQLCIETTAGLNECACRLGYVMDK 557
Query: 64 DSVTCQDMNECE--QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+ V C D++EC+ CSQ C NT GS+ CSC GY+L D +CKA+ + L+ +
Sbjct: 558 NKVNCTDIDECQYLTSPVCSQKCHNTMGSFKCSCETGYILRPDLRSCKALGGAMTLLVAN 617
Query: 122 -----------NRHSILVADLE---------EKG-----------------KDHRAQDIV 144
NR++ +V L KG R +D++
Sbjct: 618 RWDIRRVTLSNNRYTAIVKGLHNAIALDFHHRKGLMFWSDVSTDVIKMVYMNGTRVRDVI 677
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
GL+ G+A DWI ++W DS R+EV + G R V+A ++ +PR +++ PG
Sbjct: 678 KWGLESPGGIAVDWIHDLLFWTDSGTRRVEVSNFQGNLRTVIASYDLDKPRAIVV--HPG 735
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
FW+DWG NP+IER MDG+ R IIS + WPNGL +D ++Y+AD+K I+C
Sbjct: 736 EALAFWSDWGPNPKIERAYMDGTQRKVIISKGVTWPNGLAIDFPNSKIYWADAKQHAIEC 795
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
+N+DGS+ + ++S L AL L
Sbjct: 796 ----------------------------------SNLDGSDRNKILSTHLPHPFALTLFE 821
Query: 325 GMLYYSTLKCTRWLFWTDW 343
+Y WTDW
Sbjct: 822 DTMY-----------WTDW 829
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 141/356 (39%), Gaps = 91/356 (25%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA--------------------------- 110
G CS +C K S C C G L+ D TCK+
Sbjct: 882 GGCSHLCLPNKTSRRCGCPIGLSLKEDGKTCKSTADKLVLVARRKDIRLRHLRDNQADPN 941
Query: 111 ----------INHSAAFLIISNRHSILVADLEEK--GKDH----RAQDIVVSGLDLVEGL 154
+ H+ A S+ I D+E K H Q +V S L GL
Sbjct: 942 DVDMIVPLDNLKHAVALDWCSDTDFIYWTDVERSTINKAHLNGSYQQRVVHSNLVSPVGL 1001
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DWI +YW D NRIEV NG R +L + + +PR ++++P G ++FW+DWG
Sbjct: 1002 ALDWITDKLYWTDPSTNRIEVATTNGKMRTLLIWEKLYKPRDIVVNPIEG--FMFWSDWG 1059
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
++P IER MDG R TI S K+ +PNGL +D ++YF D K+LE
Sbjct: 1060 DDPMIERANMDGHERVTITSKKLIYPNGLAIDYEKSKIYFVDGGT-----KTLE------ 1108
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
N DGS ++++G L LD+ G
Sbjct: 1109 -----------------------NMNFDGSGRQVILNG-LGHPFGLDVNEGR-------- 1136
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 390
+FWTDW + + G + + II+ + RR++ A KL+
Sbjct: 1137 ---VFWTDWDTKSVMSANKLTGKDTNVIIANSTDLMDIRVFHRTRRRIFNACDKLN 1189
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 110/233 (47%), Gaps = 42/233 (18%)
Query: 71 MNECEQ-PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK-------------------- 109
N C++ G CS +C SY C+C G L+ D HTC
Sbjct: 1182 FNACDKLNGGCSHLCLLNPTSYTCACTVGVQLKEDRHTCSEGPTQYILFAHRIDIRQISL 1241
Query: 110 -------------AINHSAAFLIISNRHSILVAD------LEEKGKDHRAQDIVVSGLDL 150
I+++ A + I +D + Q IV L+
Sbjct: 1242 DFDHLIDVVLPLPPISNAVALDVDRQTGYIYWSDTIENVIMSSSPDGLHVQKIVGDSLEN 1301
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
+GL D IG IYW D+ + IEV +G+NR V+A ++ PRG+ LD G LFW
Sbjct: 1302 PDGLVVDSIGRTIYWADAGRHTIEVASLDGSNRHVIAYKDLESPRGLALDYEAGL--LFW 1359
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
TDWG +IER +DG+ RS I++ + WPNGL+LD+ ++R+Y+ D++L ID
Sbjct: 1360 TDWGHYRKIERSHLDGNERSRIVTANLGWPNGLSLDLKSKRIYWVDARLKTID 1412
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 172/449 (38%), Gaps = 110/449 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGP---GCDLAE--CKHK-----FGLCSNTCHPTPLGALC 53
RC+ T +CDG DC G DE CDL + C K +C + H +C
Sbjct: 453 RCILKTWLCDGYPDCATGEDEVECHLQCDLGQFLCPTKQNLTNLKICVHQKH------IC 506
Query: 54 ----TCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTC 108
CP GE D C +C +P C Q+C T G C+C GYV++ + C
Sbjct: 507 DGHNECPAGE----DEADCPKERKCSEPSPCEQLCIETTAGLNECACRLGYVMDKNKVNC 562
Query: 109 ----------------KAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVE 152
K N +F IL DL R+ + + L+
Sbjct: 563 TDIDECQYLTSPVCSQKCHNTMGSFKCSCETGYILRPDL-------RSCKALGGAMTLLV 615
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
+D I + NR + N I L + +G+M FW+D
Sbjct: 616 ANRWD-----IRRVTLSNNRYTAIVKGLHNAIAL---DFHHRKGLM----------FWSD 657
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN 272
+ I+ + M+G+ +I + P G+ +D
Sbjct: 658 VSTDV-IKMVYMNGTRVRDVIKWGLESPGGIAVDW------------------------- 691
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
I L+W D G V + +N G+ +++ S L + A+ + G
Sbjct: 692 -----IHDLLFWTDSGTRRVEV----SNFQGNLRTVIASYDLDKPRAIVVHPGEAL---- 738
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
FW+DWG NP+IER MDG+ R IIS + WPNGL +D ++Y+AD+K I
Sbjct: 739 -----AFWSDWGPNPKIERAYMDGTQRKVIISKGVTWPNGLAIDFPNSKIYWADAKQHAI 793
Query: 393 DFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+ N DG+ R +++ L F L D
Sbjct: 794 ECSNLDGSDRNKILSTHLPHPFALTLFED 822
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 129/267 (48%), Gaps = 33/267 (12%)
Query: 41 SNTCHPTPLGALCTCPPGEILSNDSVT-CQDMNECEQPGYCSQMCTNTKGSYICSCNEGY 99
S+ C P G C CP G L +S T CQ++ E Y + G + S N G
Sbjct: 1499 SHLCLRNPSGYSCQCPIGLRLRQNSTTQCQNLPE----DYL--LIALRSGIGMISLNSGD 1552
Query: 100 VLEYDNHTCKAIN--HSAAFLIISNRHSILV-AD-----LEEKGKDHRAQDIVVSGLDLV 151
++ IN H A L R ++L AD + + + V+ G D++
Sbjct: 1553 FMD----VVLPINGVHGAVVLDYHYRKNLLFFADVNLDVIRRVNLLNLTESKVIVGTDVL 1608
Query: 152 --EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
G+A DWI ++YW D+ IEV +G+ R + +DN+ PR +++ P +LF
Sbjct: 1609 TPNGIAVDWIADNLYWSDTDRKLIEVSRLDGSCRKRIVEDNLGDPRSLIVHPKKA--YLF 1666
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI---DCKS 266
W+DW +IER +DGSNR+ II++ I +P GLT+D RR+ +AD+ D I D
Sbjct: 1667 WSDWSSPAKIERSYLDGSNRTVIITSGIGFPTGLTIDFTNRRLLWADALEDNIGQVDFNG 1726
Query: 267 LEIKTNVNYS------TIFR-KLYWID 286
+T V Y+ T+F ++W D
Sbjct: 1727 KRRQTIVPYAPHPFGLTLFENSIFWTD 1753
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 29/181 (16%)
Query: 242 GLTLDIATRR--VYFADSKLDFIDCKSL----EIKTNVNYST----------IFRKLYWI 285
+ LD R+ ++FAD LD I +L E K V I LYW
Sbjct: 1566 AVVLDYHYRKNLLFFADVNLDVIRRVNLLNLTESKVIVGTDVLTPNGIAVDWIADNLYWS 1625
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
D + + + +DGS +V L + +L + Y LFW+DW
Sbjct: 1626 DTDRKLIEV----SRLDGSCRKRIVEDNLGDPRSLIVHPKKAY---------LFWSDWSS 1672
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+IER +DGSNR+ II++ I +P GLT+D RR+ +AD+ D I +++G RQ +
Sbjct: 1673 PAKIERSYLDGSNRTVIITSGIGFPTGLTIDFTNRRLLWADALEDNIGQVDFNGKRRQTI 1732
Query: 406 I 406
+
Sbjct: 1733 V 1733
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 134/319 (42%), Gaps = 41/319 (12%)
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
H I L GLA D+ IY++D +E + +G+ R V+ + + P G
Sbjct: 1072 HERVTITSKKLIYPNGLAIDYEKSKIYFVDGGTKTLENMNFDGSGRQVIL-NGLGHPFG- 1129
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LD + G +FWTDW + + G + + II+ + RR++ A
Sbjct: 1130 -LDVNEGR--VFWTDWDTKSVMSANKLTGKDTNVIIANSTDLMDIRVFHRTRRRIFNACD 1186
Query: 258 KLDFIDCKSLEIKTNVNYS---TIFRKL----YWIDEG-------GNGVPLKIGKANMDG 303
KL+ C L + +Y+ T+ +L + EG + + ++ + D
Sbjct: 1187 KLNG-GCSHLCLLNPTSYTCACTVGVQLKEDRHTCSEGPTQYILFAHRIDIRQISLDFDH 1245
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+L + A+ALD++ + T +++W+D EN I DG + I+
Sbjct: 1246 LIDVVLPLPPISNAVALDVD---------RQTGYIYWSDTIENV-IMSSSPDGLHVQKIV 1295
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNG 423
+ P+GL +D R +Y+AD+ I+ + DG+ R + DL
Sbjct: 1296 GDSLENPDGLVVDSIGRTIYWADAGRHTIEVASLDGSNRHVIAYKDL-----------ES 1344
Query: 424 VPALALDLENGMLYYSTEG 442
LALD E G+L+++ G
Sbjct: 1345 PRGLALDYEAGLLFWTDWG 1363
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
IV + L GL+ D IYW+D+RL I+ CD G R ++ ++ P + L
Sbjct: 1381 IVTANLGWPNGLSLDLKSKRIYWVDARLKTIDSCDYTGNQRKLIMS-SLHHPYALALSDD 1439
Query: 203 PGTRWLFWTDW 213
++WTDW
Sbjct: 1440 N----IYWTDW 1446
>gi|357627884|gb|EHJ77415.1| hypothetical protein KGM_05659 [Danaus plexippus]
Length = 2815
Score = 174 bits (440), Expect = 1e-40, Method: Composition-based stats.
Identities = 115/358 (32%), Positives = 160/358 (44%), Gaps = 73/358 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
RCV L + CDG DC +GADE C C CS++CHPTP G C+CPP +L
Sbjct: 1184 RCVPLQQQCDGSMDCGDGADEADRCGEPMCL--VAACSHSCHPTPRGPACSCPPPLVLKE 1241
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D TC + C G CSQ C K Y C+C +GY L D TCK+ A L+ S R
Sbjct: 1242 DGYTCAQAHPCTAWGVCSQTCRPHKDRYKCTCYKGYRLADDGFTCKSTEAGRALLVFSTR 1301
Query: 124 HSILVADLE-------------------EKGKD------------------------HRA 140
H + +L +G D
Sbjct: 1302 HEVRGVELPALRARPLLSALRNTIALDWRRGPDGLQLYWTDVVDDAVYRGTLADDTVAAV 1361
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ +V GL EGLA DW+ G++YW++ L++IEV +G R L ++ PR + LD
Sbjct: 1362 ETVVRRGLTTAEGLAVDWVAGNLYWVEGSLHQIEVACLDGRYRRTLITGDMDSPRAIALD 1421
Query: 201 PSPGTRWLFWTDW-GENPRIERIGM------------DGSNRSTIISTKIYWPNGLTLDI 247
P+ G ++FW+DW PRIER + DGS K PNGL LD+
Sbjct: 1422 PNAG--YMFWSDWEAAAPRIERASLAGRDRRVVVRVGDGSGEVAGDGMKGALPNGLALDL 1479
Query: 248 ATRRVYFADSKLDFIDC-------KSLEIKTNVNYS-----TIFRK-LYWIDEGGNGV 292
RR+Y+ D++ D + C + L +K + + + T+F +YW D N V
Sbjct: 1480 PARRLYWVDARADSLQCADYSGGDRRLVLKGHPSLAHPFAVTVFESHVYWTDWRSNSV 1537
Score = 107 bits (268), Expect = 1e-20, Method: Composition-based stats.
Identities = 86/305 (28%), Positives = 126/305 (41%), Gaps = 53/305 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCD-LAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CV + CDG C +G+DE CD E C C PT G C+C PG +
Sbjct: 157 CVAVAHFCDGIRHCTDGSDEWDICDNFTESSCSALGCP--CRPTHEGYKCSCAPG--YEH 212
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH----------------- 106
+ TC D +EC G C+Q C NT GSY+CSC GY L DN
Sbjct: 213 NGRTCVDSDECSWEGTCTQRCRNTAGSYVCSCVTGYALSPDNSSCDPDSSSPYASLMVAS 272
Query: 107 ----------------TCKAINHSAAFLIISN-----------RHSILVADLEEKGK-DH 138
T A++ A ++ N R S++ D E+ K
Sbjct: 273 QLGVHRQALHPATTDATRPALSVRALDMLYRNRSVCYIHNNMSRSSLVCVDAEDFSKVTV 332
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
+ LD V L DW + Y D + VC+ VL +++ RG+
Sbjct: 333 LPTPQLFPDLDSVSHLCIDWSSLNWYLSDEAREALYVCEPGLRYCRVLWDSGLSKLRGLA 392
Query: 199 LDPSPGTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+DP+ G +FW+ WG P + + ++ T++ +P LT D+A R +Y+AD+
Sbjct: 393 VDPAAGL--MFWSVWGAAAPGVMAASLSARGARSLADTRLVYPAALTADLAARHLYWADA 450
Query: 258 KLDFI 262
LD +
Sbjct: 451 YLDCV 455
Score = 82.4 bits (202), Expect = 4e-13, Method: Composition-based stats.
Identities = 49/146 (33%), Positives = 79/146 (54%), Gaps = 13/146 (8%)
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
+R+ I+ +L+ G++ ++ V D EGLA DW+GG++YW D L ++ V G
Sbjct: 647 HRYEIVRQNLDGSGREVFVEEDV----DNCEGLAVDWMGGNLYWTDDALGQLNVARMRGE 702
Query: 182 ---NRIVLAKDNITQPRGMMLDPSPGTRWLFWTD-WGENPRIERI---GMDGSNRSTIIS 234
R+VL ++ PR + LDP+ G ++W++ W P RI MDGS R +I+
Sbjct: 703 ARGARLVLMREAAAHPRAITLDPANGV--MYWSEWWSAGPSGGRILSGSMDGSGRRPLIT 760
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLD 260
+ WP GL LD +Y+ D+ L+
Sbjct: 761 DDLRWPAGLVLDSPHMTLYWCDTYLN 786
Score = 60.8 bits (146), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 334 CTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
C + ++WT+W + +P IER+ G R +++ I PNGL L+ R +Y+AD++LD +
Sbjct: 2397 CEKRIYWTNWNQTHPAIERVYASGRGRQALVTRDILMPNGLALEHEARLLYWADARLDKL 2456
Query: 393 DFCNYDGTGRQQV 405
+ YDG+ R+ V
Sbjct: 2457 ERMRYDGSHRRVV 2469
Score = 60.5 bits (145), Expect = 2e-06, Method: Composition-based stats.
Identities = 106/456 (23%), Positives = 157/456 (34%), Gaps = 126/456 (27%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLA--------------------ECKHKFGLCSNTC 44
C+ CD + DC +G+DE GC EC C N
Sbjct: 1125 CIRQEFRCDSRVDCLDGSDE-QGCTSIHSTPATTTTTAFTTTEAAKDECALPSMRCDNNS 1183
Query: 45 HPTPLGALCTCPPGEILSNDSVTCQD----MNECEQP----GYCSQMCTNTKGSYICSCN 96
PL C + S+ C D + C +P CS C T CSC
Sbjct: 1184 RCVPLQQQC---------DGSMDCGDGADEADRCGEPMCLVAACSHSCHPTPRGPACSCP 1234
Query: 97 EGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVE-GLA 155
VL+ D +TC + A+ + S + R + G L + G
Sbjct: 1235 PPLVLKEDGYTCAQAHPCTAWGVCSQTC---------RPHKDRYKCTCYKGYRLADDGFT 1285
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT---- 211
C R +L + RG+ L P+ R L
Sbjct: 1286 --------------------CKSTEAGRALLVFSTRHEVRGVEL-PALRARPLLSALRNT 1324
Query: 212 ---DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC---K 265
DW R G DG ++YW + +D A R AD + ++ +
Sbjct: 1325 IALDW-------RRGPDG--------LQLYWTD--VVDDAVYRGTLADDTVAAVETVVRR 1367
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDLE 323
L + + LYW++ G +I A +DG L++G + A+ALD
Sbjct: 1368 GLTTAEGLAVDWVAGNLYWVE----GSLHQIEVACLDGRYRRTLITGDMDSPRAIALDPN 1423
Query: 324 NGMLYYSTLKCTRWLFWTDW-GENPRIERIGM------------DGSNRSTIISTKIYWP 370
G ++FW+DW PRIER + DGS K P
Sbjct: 1424 AG-----------YMFWSDWEAAAPRIERASLAGRDRRVVVRVGDGSGEVAGDGMKGALP 1472
Query: 371 NGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
NGL LD+ RR+Y+ D++ D + +Y G R+ V+
Sbjct: 1473 NGLALDLPARRLYWVDARADSLQCADYSGGDRRLVL 1508
Score = 57.0 bits (136), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 183 RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPN 241
R VL +PRG+ DP + ++WT+W + +P IER+ G R +++ I PN
Sbjct: 2378 RTVLMLKTGDRPRGIDYDPC--EKRIYWTNWNQTHPAIERVYASGRGRQALVTRDILMPN 2435
Query: 242 GLTLDIATRRVYFADSKLD 260
GL L+ R +Y+AD++LD
Sbjct: 2436 GLALEHEARLLYWADARLD 2454
Score = 49.3 bits (116), Expect = 0.004, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 338 LFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
+FW+ WG P + + ++ T++ +P LT D+A R +Y+AD+ LD + N
Sbjct: 400 MFWSVWGAAAPGVMAASLSARGARSLADTRLVYPAALTADLAARHLYWADAYLDCVQRVN 459
Query: 397 YDGTGRQQV 405
YDG+ R V
Sbjct: 460 YDGSHRITV 468
Score = 47.8 bits (112), Expect = 0.011, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY-EALALDLENGMLYYSTLKCTRWLFW 340
LYW D+ + + + G+ ++ + A+ LD NG++Y+S +W
Sbjct: 684 LYWTDDALGQLNVARMRGEARGARLVLMREAAAHPRAITLDPANGVMYWSE-------WW 736
Query: 341 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
+ RI MDGS R +I+ + WP GL LD +Y+ D+ L+ ++ +
Sbjct: 737 SAGPSGGRILSGSMDGSGRRPLITDDLRWPAGLVLDSPHMTLYWCDTYLNKLERVRVTSS 796
Query: 401 GRQ 403
G +
Sbjct: 797 GEK 799
Score = 42.4 bits (98), Expect = 0.48, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLC-SNTCHP 46
RC+N + VCDG DCPNG+DE GP ++ +F C +N C P
Sbjct: 934 RCINSSLVCDGDKDCPNGSDEDASANGPCANVTCVDDQFMRCDTNRCIP 982
Score = 40.4 bits (93), Expect = 2.0, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q +V + + GLA + +YW D+RL+++E +G++R V+ + P +
Sbjct: 2424 QALVTRDILMPNGLALEHEARLLYWADARLDKLERMRYDGSHRRVVTRARSEHPFAV--- 2480
Query: 201 PSPGTRWLFWTDW 213
+ G W+ WTDW
Sbjct: 2481 -AAGGGWVAWTDW 2492
>gi|297262738|ref|XP_001099678.2| PREDICTED: prolow-density lipoprotein receptor-related protein 1,
partial [Macaca mulatta]
Length = 2409
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 155/304 (50%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1159 CLPPDKLCDGNDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1216
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1217 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1276
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1277 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1336
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1337 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1396
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R T+ + WPNGLT+D +R+ + D++
Sbjct: 1397 RDGI--LFWTDWDASLPRIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDAR 1454
Query: 259 LDFI 262
D I
Sbjct: 1455 SDAI 1458
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 166/378 (43%), Gaps = 74/378 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CV ++++C+G DC +G+DEGP C +L + G C + C PT G C C L
Sbjct: 85 CVPMSRLCNGVQDCMDGSDEGPHCRELRGNCSRLG-CQHHCVPTLDGPTCYCNSSFQLQA 143
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLII 120
DS TC+D +EC G CSQ+CTNT GS+IC C EGY+L+ DN +CKA N L+I
Sbjct: 144 DSKTCKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPVDRPPVLLI 203
Query: 121 SNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD------------S 168
+N +IL L + I + + + + + W+ +
Sbjct: 204 ANSQNILATYLSGA----QVSTITPTSTRQTTAMDFSYANETVCWVHVGDNAAQTQLKCA 259
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
R+ ++ + T I L+ ++ Q M +D G + F D + RI +G
Sbjct: 260 RMPGLKGFVDEHTINISLSLHHVEQ---MAIDWLTGN-FYFVDDIDD--RIFVCNRNGDT 313
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
T++ ++Y P G+ LD A +V+F D Y I
Sbjct: 314 CVTLLDLELYNPKGIALDPAMGKVFFTD------------------YGQI---------- 345
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
K+ + +MDG N + LV ++ + LDL + ++Y++ + D+
Sbjct: 346 -----PKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADA-------YLDY--- 390
Query: 347 PRIERIGMDGSNRSTIIS 364
IE + +G R TII
Sbjct: 391 --IEVVDYEGKGRQTIIQ 406
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 485 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 543
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 544 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 603
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 604 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 661
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 662 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 721
Query: 261 FID 263
I+
Sbjct: 722 RIE 724
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 99/230 (43%), Gaps = 40/230 (17%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1855 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1911
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ VSG L G+ + IYW+D L+ I + T R + + I + G
Sbjct: 1912 SDAL--VPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEG 1969
Query: 197 MMLDPSPGTRW----------------------------------LFWTDWGENPRIERI 222
+ +D G +W LFWT+WG+ PRIER
Sbjct: 1970 IAVDWIAGEQWVGLWGLRCGRGLGDVGGGGVGGSRKRSCRGAWGYLFWTEWGQYPRIERS 2029
Query: 223 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN 272
+DG+ R +++ I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 2030 RLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEN 2079
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 39/194 (20%)
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG-------S 304
Y + +++ I S T +++S + W+ G N ++ A M G
Sbjct: 212 TYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDNAAQTQLKCARMPGLKGFVDEH 271
Query: 305 NASILVSGQLYEALALDLENGMLYY------STLKCTR---------------------- 336
+I +S E +A+D G Y+ C R
Sbjct: 272 TINISLSLHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELYNPKGIALD 331
Query: 337 ----WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
+F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I
Sbjct: 332 PAMGKVFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYI 391
Query: 393 DFCNYDGTGRQQVI 406
+ +Y+G GRQ +I
Sbjct: 392 EVVDYEGKGRQTII 405
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 140/362 (38%), Gaps = 66/362 (18%)
Query: 72 NECEQ---PGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL 127
N CE G CS +C N + C+C L D TC FL+ + + I
Sbjct: 1538 NPCEANGGRGPCSHLCLINYNRTVSCACPHLMKLHKDKTTCYEFK---KFLLYARQMEIR 1594
Query: 128 VADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
DL+ ++ V +D V L YD +YW D R I+ NGT +
Sbjct: 1595 GVDLDAPYYNYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVV 1653
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLD 246
++ G+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1654 SADLPNAHGLAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV- 1709
Query: 247 IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
+ KLYW D G N I ANMDGSN
Sbjct: 1710 -----------------------------HPLRGKLYWTD-GDN-----ISMANMDGSNR 1734
Query: 307 SILVSGQLYE-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
++L SGQ LA+D LY W G N I R +DGS I +
Sbjct: 1735 TLLFSGQKGPVGLAIDFPESKLY-----------WISSG-NHTINRCNLDGSGLEVIDAM 1782
Query: 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCN-YDGTG----RQQVILIDLMVEFTNDLMG 420
+ L I ++++AD + + C+ DG+G R L+ M + +
Sbjct: 1783 RSQLGKATALAIMGDKLWWADQVSEKMGTCSKADGSGSIVLRNSTTLVMHMKVYDESIQL 1842
Query: 421 DN 422
D+
Sbjct: 1843 DH 1844
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 48/71 (67%)
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
+LFWT+WG+ PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+ +
Sbjct: 2014 YLFWTEWGQYPRIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERID 2073
Query: 397 YDGTGRQQVIL 407
+ ++V+L
Sbjct: 2074 LETGENREVVL 2084
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2334 ECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2393
Query: 392 IDFCNYDGTGR 402
I+ C YDG+ R
Sbjct: 2394 IERCEYDGSHR 2404
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY ++YW + I + T
Sbjct: 2253 IHFGNIQQINDDGSRRITIVENVGSVEGLAYHRGWDNLYWTSYTTSTITRHTVDQTRPGA 2312
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2313 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIR 2370
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2371 TPNGLAIDHRAEKLYFSDATLDKIE 2395
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1278 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1327
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1328 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1378
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1379 ---TTLLAGDIEHPRAIALDPRDGILFWT 1404
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 17/121 (14%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 679 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 738
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIER--------IGMDGSNRSTIISTKI 237
+ G+ + +LFWT++ G R+ER + + S R I ++
Sbjct: 739 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLERGVGGAPPTVTLLRSERPPIFEIRM 794
Query: 238 Y 238
Y
Sbjct: 795 Y 795
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNR-IVLAKDNITQPRGMMLDPSPGTRWLFW 210
G++ D+ G +YW D+R ++IE D E G NR +VL+ +N+ M S +++W
Sbjct: 2049 GISVDYQDGKLYWCDARTDKIERIDLETGENREVVLSSNNMD-----MFSVSVFEDFIYW 2103
Query: 211 TDWGE-NPRIERIGMDGSNRSTIISTKI 237
+D N I+R D + S + T I
Sbjct: 2104 SDRTHANGSIKRGSKDNATDSVPLRTGI 2131
>gi|355765149|gb|EHH62375.1| Prolow-density lipoprotein receptor-related protein 1, partial
[Macaca fascicularis]
Length = 2456
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 155/304 (50%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1137 CLPPDKLCDGNDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1194
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1195 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1254
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1255 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1314
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1315 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1374
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R T+ + WPNGLT+D +R+ + D++
Sbjct: 1375 RDGI--LFWTDWDASLPRIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDAR 1432
Query: 259 LDFI 262
D I
Sbjct: 1433 SDAI 1436
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 47/237 (19%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1833 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1889
Query: 137 ----------------DHRAQ-------------------------DIVVSGLDLVEGLA 155
D A+ D+V +G+ VEG+A
Sbjct: 1890 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1949
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1950 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2007
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 2008 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEN 2064
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 166/378 (43%), Gaps = 74/378 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CV ++++C+G DC +G+DEGP C +L + G C + C PT G C C L
Sbjct: 63 CVPMSRLCNGVQDCMDGSDEGPHCRELRGNCSRLG-CQHHCVPTLDGPTCYCNSSFQLQA 121
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLII 120
DS TC+D +EC G CSQ+CTNT GS+IC C EGY+L+ DN +CKA N L+I
Sbjct: 122 DSKTCKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPVDRPPVLLI 181
Query: 121 SNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD------------S 168
+N +IL L + I + + + + + W+ +
Sbjct: 182 ANSQNILATYLSGA----QVSTITPTSTRQTTAMDFSYANETVCWVHVGDNAAQTQLKCA 237
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
R+ ++ + T I L+ ++ Q M +D G + F D + RI +G
Sbjct: 238 RMPGLKGFVDEHTINISLSLHHVEQ---MAIDWLTGN-FYFVDDIDD--RIFVCNRNGDT 291
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
T++ ++Y P G+ LD A +V+F D Y I
Sbjct: 292 CVTLLDLELYNPKGIALDPAMGKVFFTD------------------YGQI---------- 323
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
K+ + +MDG N + LV ++ + LDL + ++Y++ + D+
Sbjct: 324 -----PKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADA-------YLDY--- 368
Query: 347 PRIERIGMDGSNRSTIIS 364
IE + +G R TII
Sbjct: 369 --IEVVDYEGKGRQTIIQ 384
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 463 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 521
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 522 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 581
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 582 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 639
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 640 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 699
Query: 261 FID 263
I+
Sbjct: 700 RIE 702
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 39/194 (20%)
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG-------S 304
Y + +++ I S T +++S + W+ G N ++ A M G
Sbjct: 190 TYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDNAAQTQLKCARMPGLKGFVDEH 249
Query: 305 NASILVSGQLYEALALDLENGMLYY------STLKCTR---------------------- 336
+I +S E +A+D G Y+ C R
Sbjct: 250 TINISLSLHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELYNPKGIALD 309
Query: 337 ----WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
+F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I
Sbjct: 310 PAMGKVFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYI 369
Query: 393 DFCNYDGTGRQQVI 406
+ +Y+G GRQ +I
Sbjct: 370 EVVDYEGKGRQTII 383
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 140/362 (38%), Gaps = 66/362 (18%)
Query: 72 NECEQ---PGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL 127
N CE G CS +C N + C+C L D TC FL+ + + I
Sbjct: 1516 NPCEANGGRGPCSHLCLINYNRTVSCACPHLMKLHKDKTTCYEFK---KFLLYARQMEIR 1572
Query: 128 VADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
DL+ ++ V +D V L YD +YW D R I+ NGT +
Sbjct: 1573 GVDLDAPYYNYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVV 1631
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLD 246
++ G+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1632 SADLPNAHGLAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV- 1687
Query: 247 IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
+ KLYW D G N I ANMDGSN
Sbjct: 1688 -----------------------------HPLRGKLYWTD-GDN-----ISMANMDGSNR 1712
Query: 307 SILVSGQLYE-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
++L SGQ LA+D LY W G N I R +DGS I +
Sbjct: 1713 TLLFSGQKGPVGLAIDFPESKLY-----------WISSG-NHTINRCNLDGSGLEVIDAM 1760
Query: 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCN-YDGTG----RQQVILIDLMVEFTNDLMG 420
+ L I ++++AD + + C+ DG+G R L+ M + +
Sbjct: 1761 RSQLGKATALAIMGDKLWWADQVSEKMGTCSKADGSGSIVLRNSTTLVMHMKVYDESIQL 1820
Query: 421 DN 422
D+
Sbjct: 1821 DH 1822
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2319 ECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2378
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2379 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2409
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 2238 IHFGNIQQINDDGSRRITIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGA 2297
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2298 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIR 2355
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2356 TPNGLAIDHRAEKLYFSDATLDKIE 2380
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2359 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 2414
Query: 213 W 213
W
Sbjct: 2415 W 2415
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1256 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1305
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1306 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1356
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1357 ---TTLLAGDIEHPRAIALDPRDGILFWT 1382
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 17/121 (14%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 657 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 716
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIER--------IGMDGSNRSTIISTKI 237
+ G+ + +LFWT++ G R+ER + + S R I ++
Sbjct: 717 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLERGVGGAPPTVTLLRSERPPIFEIRM 772
Query: 238 Y 238
Y
Sbjct: 773 Y 773
>gi|449275178|gb|EMC84121.1| Low-density lipoprotein receptor-related protein 1B, partial [Columba
livia]
Length = 4583
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 183/420 (43%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGA-LCTCPPGEILSN 63
C+ K+C+G+ DCP+G+DEG CD EC G CS+ C P G +C+CP G LS
Sbjct: 1130 CLQPEKLCNGRRDCPDGSDEGDLCD--ECSLNNGGCSHQCSVVPGGRIMCSCPAGFSLSI 1187
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ M+ C + CSQ+C K + CSC EG+ L D C + + AF+I S R
Sbjct: 1188 DNKTCEIMDYCTKHLKCSQVCEQHKNTIKCSCYEGWKLSKDGENCVSTDPFEAFIIFSIR 1247
Query: 124 HSILVADLEEKGKD--------------HRAQD--------------------------- 142
H I DL ++ H +Q
Sbjct: 1248 HEIRKIDLHKRDYSLLVPGLRNTIALDFHFSQSLLYWTDVVEDKIFRGKLSDTGGVSAIE 1307
Query: 143 -IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +GT R L + PR + LDP
Sbjct: 1308 VVVQHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGTLRTTLIAGAMEHPRAIALDP 1367
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R I WPNGLT+D +R+ + D++
Sbjct: 1368 RYGI--LFWTDWDANFPRIESASMSGAERKIIYKDMDTGAWPNGLTVDHFEKRIVWTDAR 1425
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG++ ++ G Y +
Sbjct: 1426 SDAI------------YSALY----------------------DGTSMIEIIRGHEYLSH 1451
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 1452 PFAVS---LYGSE------VYWTDWRTNTLAKANKWTGQNVSVIQKTSAQPFDLQIYHPS 1502
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 145/294 (49%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+CV T VCD K DC +G+DE C + EC K CS C P+G C C PG L
Sbjct: 2887 KCVPQTAVCDNKEDCSDGSDE-KSCHINECLSKKVSGCSQDCQDLPVGYKCKCWPGFRLK 2945
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C +GY ++ DN H CK+++ FLI++
Sbjct: 2946 DDGKTCVDIDECSSGFPCSQQCINTYGTYKCLCADGYEIQPDNLHGCKSLSDEEPFLILA 3005
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
+ H I L ++G D+R + I
Sbjct: 3006 DHHEIRKISTDGSNYTLLKQGLNNVIAIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDI 3065
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG VL + PR + +DP
Sbjct: 3066 KVVHNTAVPNALAVDWIGKNLYWSDTEKRVIEVSKLNGLYPTVLVSKRVKFPRDLSVDPQ 3125
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +L+W D E P I R+GMDGS+++ +I T+I P LT+D R+Y+AD
Sbjct: 3126 AG--YLYWIDCCEYPHIGRVGMDGSSQTVVIETQISRPMALTIDYVNHRLYWAD 3177
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 144/555 (25%), Positives = 221/555 (39%), Gaps = 133/555 (23%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
++C++L+++C+G DC +G DEG C K + C C T G C C G
Sbjct: 61 TNKCIHLSQLCNGVYDCSDGYDEGVHCRELLPKCQQMSCRYKCAITRNGTRCYCGDGYET 120
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTK-------GSYICSCNEGYVLEYDNHTCKAINHS 114
S+D +C + +CS T GSY CSC EGYVL+ DN +CKA N
Sbjct: 121 SSDGRSCTGGS----ISWCSDQLTAHSCEPILIFGSYTCSCVEGYVLQPDNKSCKAKNEP 176
Query: 115 A---AFLIISNRH---------------------SILVADLEEK--------GKDHRAQ- 141
A L++++ SIL D K +D +Q
Sbjct: 177 ADRPPLLLVASSETIEVLYLNGSKMSTRTPVKGSSILTLDYSYKEDTVCWIESRDLSSQL 236
Query: 142 ---DIVVSG-------------LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I+ +G L V+ +A DWI G+ Y++D +RI VC +NG+ I
Sbjct: 237 KCTKIMKTGELTDEWIINIAQYLHNVQQIAIDWITGNFYFVDHVSDRIFVCSQNGSVCIT 296
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
L + ++ P+ + +DP+ G LF+TD+G ++ER MDG NR+ I+ +KI P L L
Sbjct: 297 LIELDLNNPKAIAVDPTSGK--LFFTDYGNTAKVERCDMDGMNRTWIVDSKIEQPTALAL 354
Query: 246 DIATRRVYFADSKLDFIDC------------KSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
D+ + VY+ D LD ++ K +I+ ++ +F + N
Sbjct: 355 DLINKYVYWVDIYLDSVEVVDYQGRKRHTIIKGRQIR-HLRGLAVFENYLYTVNSDNLSI 413
Query: 294 LKIGKAN--------------------------------------MDGSNASILVSGQLY 315
L+I + N M G + I + Y
Sbjct: 414 LQINRYNGTDVQSLARLDNAKEIRVYQKRTQTAVRSHACDVDPYGMPGGCSHICLLSSNY 473
Query: 316 EALALDLENGMLYYSTLK-CTR---WLFWTDWGENPRIERIGMD----GSNRSTIISTKI 367
+A G + S + C R LF P I R GMD S+ I +
Sbjct: 474 KARTCRCRTGFILGSDGRSCKRPKNELFLFYGKGRPGIIR-GMDLNTKVSDEYMIPIENL 532
Query: 368 YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPAL 427
P L T +YFAD+ I DGT R+ ++ DL + V +
Sbjct: 533 VNPRALDFHAETNYIYFADTTSFLIGRQKIDGTERETILKDDL-----------DNVEGI 581
Query: 428 ALDLENGMLYYSTEG 442
A+D LY++ +G
Sbjct: 582 AVDWIGNNLYWTNDG 596
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 133/304 (43%), Gaps = 61/304 (20%)
Query: 64 DSVTCQDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D Q N C+ G CSQ+C T + + C C GY L+ + CK I +FL+ S
Sbjct: 1808 DKAAQQGSNSCQLNNGGCSQLCLPTSETTRTCVCTVGYNLQKNRMACKGIE---SFLMYS 1864
Query: 122 NRHSILVADLEEK----------------GKDHRA------------------------- 140
I L+ G D A
Sbjct: 1865 VHEGIRGIPLDPNDKMDALMPISGTSFAVGVDFHAGNDTIYWTDMGFNKISRSKRDQTWK 1924
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+DIV +GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + +
Sbjct: 1925 EDIVTNGLGRVEGIAVDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIAVH 1984
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +LFWT+WG+ P I + +DGS + ++S I WPNG+++D ++Y+ D++ D
Sbjct: 1985 PEKG--YLFWTEWGQTPCIGKAHLDGSEKVVLVSLGIAWPNGISIDYEENKLYWCDARTD 2042
Query: 261 FIDCKSLEIKTN------------VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
I+ LE N + + +YW D ++ G N + ++A
Sbjct: 2043 KIERIDLESGGNREIVLSGSNVDMFSVAVFGAYIYWSDRAHANGSIRRGHKN-EATDAVT 2101
Query: 309 LVSG 312
+ +G
Sbjct: 2102 MRTG 2105
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 140/328 (42%), Gaps = 74/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLA----ECKHKFGLCSNT--CHPTPLGALCTCPP 57
+C+ + CD DC +G+DE C ++ C+ C + C+ T LC C P
Sbjct: 3757 KCIPMELQCDWFDDCGDGSDE-QDCKISVTEYTCEDSVNPCGDDAYCNQTKTSILCQCKP 3815
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G + + C+D+NEC G CSQ C N KGSY C+C + Y + N++C A
Sbjct: 3816 GFQRNRRNRQCEDINECMVFGACSQHCNNIKGSYKCACEKNY--KERNNSCIAKGSEDQV 3873
Query: 118 LIISNRHSIL--------------VADLEEK----GKDHRAQ-DIVV------------- 145
L ++N IL V+ +E G D Q D++V
Sbjct: 3874 LYVANDTDILGFAYPFNYSDVHHQVSHIEHNSRITGLDAYFQGDMIVWSTQFNPGGIFYR 3933
Query: 146 -----------SGLDLVE-----GLAYDWIGGHIYWLD-SRLN--------------RIE 174
SGL E G+A DW+ G+IYW D SR++ I
Sbjct: 3934 RLHDRERRQSNSGLICPEFKRPRGIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSIN 3993
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V NG N L +P + ++P G ++WT G+ IE MDG+ R ++
Sbjct: 3994 VGQLNGPNCTRLLTSMAGEPYAIAVNPKKGM--MYWTVIGDRSHIEESSMDGTLRRILVQ 4051
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D ++R+++AD +L I
Sbjct: 4052 KNLQRPTGLVVDQFSQRLFWADFELSVI 4079
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 107/240 (44%), Gaps = 55/240 (22%)
Query: 77 PGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA-DLEE 133
PG CS +C ++ + C C G++L D +CK + R I+ DL
Sbjct: 460 PGGCSHICLLSSNYKARTCRCRTGFILGSDGRSCKRPKNELFLFYGKGRPGIIRGMDLNT 519
Query: 134 KGKDH-----------RAQD------------------------------IVVSGLDLVE 152
K D RA D I+ LD VE
Sbjct: 520 KVSDEYMIPIENLVNPRALDFHAETNYIYFADTTSFLIGRQKIDGTERETILKDDLDNVE 579
Query: 153 GLAYDWIGGHIYWL-DSRLNRIEVC--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
G+A DWIG ++YW D I V ++ +R L + +++ PRG+++DP G W++
Sbjct: 580 GIAVDWIGNNLYWTNDGHRKTIAVARLEKAAQSRKTLLEGDMSHPRGIVVDPVNG--WMY 637
Query: 210 WTDWGENP------RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
WTDW E+ RIE+ MDG +R +++K+ WPNGLTLD +Y+ D+ D I+
Sbjct: 638 WTDWEEDEIDDSVGRIEKAWMDGYSRQIFVTSKMLWPNGLTLDYHANVLYWCDAYYDHIE 697
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 132/335 (39%), Gaps = 57/335 (17%)
Query: 75 EQPGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEE 133
E G CS MC N S C+C L D TC FL+ + R I D+E
Sbjct: 1515 EGRGPCSHMCLINHNRSAACACPHLMKLALDKKTCY---ERKKFLLYARRSEIRGVDIEN 1571
Query: 134 KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
+ V +D V + +D + +YW D + I+ NGT + +I
Sbjct: 1572 PYFNFITA-FTVPDIDDVTVIDFDAVEERLYWTDVKTQTIKRAFINGTGLETIISRDIQS 1630
Query: 194 PRGMMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
RG+ +D +R L+W + + +I +DGS +++II
Sbjct: 1631 IRGLAVDWI--SRNLYWISSEFDETQINVARLDGSLKTSII------------------- 1669
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+D C ++ + KLYW D GN + + ANMDGSN+ IL
Sbjct: 1670 ----HGIDKPQCLAVH--------PVKGKLYWTD--GNTINM----ANMDGSNSKILFQN 1711
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
Q + + L ++ G L+W G N I R +DG N I S K
Sbjct: 1712 Q-KDPVGLSIDYG---------ENKLYWISSG-NGTINRCNLDGGNLEIIESMKEDLTKA 1760
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
L I +++++AD L I CN GR +L
Sbjct: 1761 TALTIMDKKLWWADQNLAQIGTCN-KKDGRNPTVL 1794
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E P I R + G N IIST I PNGLT+D ++YF+D L
Sbjct: 2307 ECQNLMFWTNWNEQLPSIMRSTLSGKNAQVIISTDILTPNGLTIDHRAEKLYFSDGSLGK 2366
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 2367 IERCEYDGSQRYVIV 2381
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 13/133 (9%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-----NRIEVCDENGTNR---IVLAKDNI 191
+ +++ + VEGLAY +YW S + ++ NR I +++D+
Sbjct: 2240 GRKVLIENVGSVEGLAYHRAWDTLYWTSSTTSSITRHTVDQRRRGAFNREAVITMSEDD- 2298
Query: 192 TQPRGMMLDPSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
P + LD +FWT+W E P I R + G N IIST I PNGLT+D
Sbjct: 2299 -HPHVLALDEC--QNLMFWTNWNEQLPSIMRSTLSGKNAQVIISTDILTPNGLTIDHRAE 2355
Query: 251 RVYFADSKLDFID 263
++YF+D L I+
Sbjct: 2356 KLYFSDGSLGKIE 2368
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 86/225 (38%), Gaps = 38/225 (16%)
Query: 240 PNGLTLDIATRRVYFADSKLDFIDCKSL-EIKTNVNYSTIFRKLYWIDEGGNGVPL---- 294
P G +L I + D + C + E N + + +G N V
Sbjct: 1180 PAGFSLSIDNKTCEIMDYCTKHLKCSQVCEQHKNTIKCSCYEGWKLSKDGENCVSTDPFE 1239
Query: 295 ---------KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
+I K ++ + S+LV G L +ALD + +L L+WTD E
Sbjct: 1240 AFIIFSIRHEIRKIDLHKRDYSLLVPG-LRNTIALDFH----FSQSL-----LYWTDVVE 1289
Query: 346 NPRIERIGMDGSNRSTI---ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
+ D S I + + P GLT+D +Y+ DS LD I+ DGT R
Sbjct: 1290 DKIFRGKLSDTGGVSAIEVVVQHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGTLR 1349
Query: 403 QQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
LI +E A+ALD G+L+++ A F +
Sbjct: 1350 --TTLIAGAMEHPR---------AIALDPRYGILFWTDWDANFPR 1383
>gi|28316919|gb|AAO39481.1| RE59172p [Drosophila melanogaster]
Length = 1937
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 150/312 (48%), Gaps = 61/312 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADE------GPGCDLAECKHKFGLCSNTCHPTPL-GALCTCPP 57
C+ L++VCDG +DC +G+DE P CD +C CH P GA C CP
Sbjct: 281 CLTLSEVCDGHSDCSDGSDETDLCHSKPDCDAKKCA-----LGAKCHMMPASGAECFCPK 335
Query: 58 GEILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI----N 112
G L+ C+D++EC EQ CSQ C NT G Y C C+ GY+L+ DN TC+A+
Sbjct: 336 GFRLAKFEDKCEDVDECKEQDDLCSQGCENTSGGYRCVCDAGYLLDKDNRTCRAVVYGSK 395
Query: 113 HSAAFLIISNRHSILVADLEE--------------------------------------- 133
L+ + + +I+ L E
Sbjct: 396 EQQPLLLYTTQMTIMGMHLREDNVRNHVYQVAGNLSKVIGVAYDGSHIYWTNIQNEAESI 455
Query: 134 ---KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
G A+ ++ SGLD E LA DW+ +IY+ D+ + I VC +G N VL +
Sbjct: 456 VEANGDGSNAEILLSSGLDAPEDLAVDWLTQNIYFSDNIMRHIAVCSNDGLNCAVLVTQD 515
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ QPR + + P G +FWTDWGE P I R MDGS I+S I WPNG+ LD+ +
Sbjct: 516 VHQPRSLAVWPQKG--LMFWTDWGEKPMIGRASMDGSRSRPIVSDNIEWPNGIALDMHQQ 573
Query: 251 RVYFADSKLDFI 262
R+Y+ D+KL +
Sbjct: 574 RIYWVDAKLGSV 585
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 137/317 (43%), Gaps = 59/317 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFG--LCSNTCHPTPLGALCTCPPGEILS 62
CV+L++VC+ DC NG DEGP C A C+ G +C + C TP GA+C+C G L
Sbjct: 1352 CVDLSRVCNNFPDCTNGHDEGPKCATA-CRSASGRQVCQHKCRATPAGAVCSCFDGYRLD 1410
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D +C D++EC++ C+Q+C NT G Y C C+ ++L D +CK++ A L S
Sbjct: 1411 ADQKSCLDIDECQEQQPCAQLCENTLGGYQCQCHADFMLRQDRVSCKSLQSGATLLFSSF 1470
Query: 123 RHSILVADLEEK----GKDHRAQDIVVSGLDLV------------EGLAY---------- 156
V +L E+ A D ++G DL EG+ Y
Sbjct: 1471 NE---VRNLSEQPVMLNVAWSANDSRITGFDLAMHRQMGYFSAEDEGIVYQIDLQTKVIV 1527
Query: 157 -------------DWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDP 201
DW+ G++Y L S I+ C G RIV ++ PR +
Sbjct: 1528 RALGLPAPTKLSVDWVTGNVYVL-SGAQEIQACSFVGRMCGRIV----HVKSPRHVKHLA 1582
Query: 202 SPGTRWLFW------TDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
G + +G+ + I +DGS R ++ + LT D + +YF
Sbjct: 1583 VDGYHARIFYIVIRTEGYGQTSSEIHMARLDGSRRDMLLQRSESFMTALTTDPHQQLLYF 1642
Query: 255 ADSKLDFIDCKSLEIKT 271
D + ++ S +KT
Sbjct: 1643 VDQHMRTLERISYRLKT 1659
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 107/455 (23%), Positives = 172/455 (37%), Gaps = 105/455 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAE--CKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + +CDG+ DC + +DE GC AE C + LC+N G L
Sbjct: 197 CIPIDFMCDGRPDCTDKSDEVAGCKQAEITCPGEGHLCAN---------------GRCLR 241
Query: 63 NDSVTCQDMNEC----EQPGYCSQMCTNTKGSYICSCNEGYVLEY---DNHT-------- 107
C +++C ++ G C +C KG ++C E + D H+
Sbjct: 242 RKQWVCDGVDDCGDGSDERG-CLNLCEPQKGKFLCRNRETCLTLSEVCDGHSDCSDGSDE 300
Query: 108 --------------------CKAINHSAAFLIISNRHSILVADLEEKGKD----HRAQDI 143
C + S A +A E+K +D D+
Sbjct: 301 TDLCHSKPDCDAKKCALGAKCHMMPASGAECFCPK--GFRLAKFEDKCEDVDECKEQDDL 358
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP--------- 194
G + G Y + Y LD +N T R V+ QP
Sbjct: 359 CSQGCENTSG-GYRCVCDAGYLLDK---------DNRTCRAVVYGSKEQQPLLLYTTQMT 408
Query: 195 -RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
GM L R + G ++ + DGS+ IYW N +
Sbjct: 409 IMGMHLRED-NVRNHVYQVAGNLSKVIGVAYDGSH--------IYWTNIQNEAESIVEAN 459
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
S + + L+ ++ + + +Y+ D + I + DG N ++LV+
Sbjct: 460 GDGSNAEILLSSGLDAPEDLAVDWLTQNIYFSD----NIMRHIAVCSNDGLNCAVLVTQD 515
Query: 314 LYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
+++ +L + + G+ +FWTDWGE P I R MDGS I+S I WPN
Sbjct: 516 VHQPRSLAVWPQKGL-----------MFWTDWGEKPMIGRASMDGSRSRPIVSDNIEWPN 564
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
G+ LD+ +R+Y+ D+KL + DGTGR+ V+
Sbjct: 565 GIALDMHQQRIYWVDAKLGSVQTVRPDGTGRRTVL 599
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 10/108 (9%)
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
R++ IV ++ G+A D IYW+D++L ++ +GT R + + P G+
Sbjct: 551 RSRPIVSDNIEWPNGIALDMHQQRIYWVDAKLGSVQTVRPDGTGRRTVLDGMLKHPYGLA 610
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNR------STIISTKIYWP 240
+ L+W+DW G + TI + IY P
Sbjct: 611 IFED----QLYWSDWATKSVHACHKFSGKDHRILAKDRTIYAVHIYHP 654
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 107/271 (39%), Gaps = 40/271 (14%)
Query: 27 GCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMN-------------- 72
GC+ A C H L P G C CP G L+ D C M
Sbjct: 663 GCENATCSHLCLLAE----PEIGGHSCACPDGMRLAPDHRRCMLMEKRQRLFIGLGQVLL 718
Query: 73 ECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE 132
E E + + + + C NE + Y+ IN S LII++ L+ LE
Sbjct: 719 EIEHTAFGRHQVSKSY-TLPCLINE---MVYNR-----INGS---LIIADNDQRLI--LE 764
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA-KDNI 191
+ + H + +V S L V LA+D + ++YW D+ IEV +R ++
Sbjct: 765 FQPESHESNVLVRSNLGNVSALAFDHLSRNLYWADTERAVIEVLSLQTRHRALIRFFPGQ 824
Query: 192 TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL--DIAT 249
P G+ + P+ G ++ + I++I + G + + + L D T
Sbjct: 825 EVPIGLTVMPAEGYLYVVLK-AKRHSHIDKIPLSGKGEQVHVFEDDLGDDDIKLVTDYET 883
Query: 250 RRVYFADSKLDFIDCKSLEIKTNVNYSTIFR 280
+ ++++DS L I + V +S IFR
Sbjct: 884 QTIFWSDSDLGRISYSNYR----VPHSQIFR 910
>gi|195551463|ref|XP_002076234.1| GD15368 [Drosophila simulans]
gi|194201883|gb|EDX15459.1| GD15368 [Drosophila simulans]
Length = 1857
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/371 (32%), Positives = 172/371 (46%), Gaps = 67/371 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+CV + ++CDGK DC + DEG C C CS+ CH TP G +C+CP L
Sbjct: 975 QCVTVDQLCDGKNDCEDTTDEGFLCADKLCDRGHE-CSHRCHNTPEGYICSCPDHLYLQP 1033
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
+ C + C+ CSQ+C ++ Y C C +G+ L +D TCK+ ++I +NR
Sbjct: 1034 NGKRCSMQHACDHWDTCSQVCESSGKGYDCRCLDGFDLGFDRFTCKSTAPDEPYVIFTNR 1093
Query: 124 HSILVADLEE-------------------------------------------KGKDHRA 140
I +L+ G+ R
Sbjct: 1094 QDIKGINLKTLNVGNFYSSLRNIIALDFLYNNESNVEIYWTDVIDDKIYRGHLVGESLRN 1153
Query: 141 QDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+ V+ SGL EGLA DW+G ++YW+DS L++IEV NG+ R L N+ PR + L
Sbjct: 1154 VEAVIHSGLSTTEGLAVDWVGKNLYWIDSNLDQIEVAKLNGSFRRTLIAGNMESPRAIAL 1213
Query: 200 DPSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIST---KIYWPNGLTLDIATRRVYFA 255
DP G LFWTDW +N PRIER M G R I ++ WPNGLTLD +RVY+
Sbjct: 1214 DPREGL--LFWTDWDDNSPRIERASMSGDGRRMISTSWQLSAGWPNGLTLDYTQKRVYWV 1271
Query: 256 DSKLDFIDC------------KSLEIKTNVNYSTIFRK-LYWIDEGGNGVPLKIGKANMD 302
D+K D I ++ EI ++ ++F +YW D V ++ K N
Sbjct: 1272 DAKSDSISSTMYDGSEHHVVLRNKEILSHPFAISVFENYVYWTDWRTTSV-IRANKWN-- 1328
Query: 303 GSNASILVSGQ 313
GS+ +L Q
Sbjct: 1329 GSDVQVLQRTQ 1339
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 16/178 (8%)
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNITQPRGMMLDPSP 203
VS L DW+ G+ Y + + +C T R++L + + + LDP+
Sbjct: 112 VSPQQFFTELRLDWLSGNWYLVSEDDGLVYLCTNAMTYCRVILQQ--VDPLSSLALDPTK 169
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G ++F+TDW P + R +DGSNR+ +++ ++Y P+ +TLD+A VY+ D D ++
Sbjct: 170 G--FMFYTDW--TPSLSRSLLDGSNRTVLVTDQVYHPSSVTLDLANELVYWIDIYKDEVN 225
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
E + N T+ R L + VPLK A N+ L + +ALD
Sbjct: 226 RVDYEGR---NRWTLKRPL------DSPVPLKTIHAVEVFENSIYLAAWMDASIVALD 274
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 13/95 (13%)
Query: 308 ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 367
IL +LALD G ++Y TDW P + R +DGSNR+ +++ ++
Sbjct: 153 ILQQVDPLSSLALDPTKGFMFY-----------TDW--TPSLSRSLLDGSNRTVLVTDQV 199
Query: 368 YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
Y P+ +TLD+A VY+ D D ++ +Y+G R
Sbjct: 200 YHPSSVTLDLANELVYWIDIYKDEVNRVDYEGRNR 234
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 12/133 (9%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL V +A+DWI H+YW + +++V ++++ T M L+
Sbjct: 442 LLTQGLKRVHAVAFDWINDHLYWTSHK--KMQVAPLKNLSKVLTFN---TDCDAMSLELD 496
Query: 203 PGTRWLFWTDWGEN---PRIERIGMDGSNRSTII----STKIYWPNGLTLDIATRRVYFA 255
P T L+W+ W I MDG+++ + + + WP L +D T+ +Y+
Sbjct: 497 PTTGLLYWSQWESQSCEAGIYSAWMDGTHKELLAKGTSAMPMQWPRSLDVDRRTKELYWC 556
Query: 256 DSKLDFIDCKSLE 268
D +L I+ L+
Sbjct: 557 DIRLSTIELMKLD 569
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 92/226 (40%), Gaps = 46/226 (20%)
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEG----GNGVP-LKIGKANMDGSNASILVSG-QLYEAL 318
K+L I NV +F + D G GNG P I +++GS + +L G + A+
Sbjct: 396 KTLAIDVNVRGKAVFYVV--ADSGASPFGNGEPSCSIRSQSLNGSVSRLLTQGLKRVHAV 453
Query: 319 ALDLENGMLYYSTLK-----------------------------CTRWLFWTDWGEN--- 346
A D N LY+++ K T L+W+ W
Sbjct: 454 AFDWINDHLYWTSHKKMQVAPLKNLSKVLTFNTDCDAMSLELDPTTGLLYWSQWESQSCE 513
Query: 347 PRIERIGMDGSNRSTII----STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
I MDG+++ + + + WP L +D T+ +Y+ D +L I+ DGTGR
Sbjct: 514 AGIYSAWMDGTHKELLAKGTSAMPMQWPRSLDVDRRTKELYWCDIRLSTIELMKLDGTGR 573
Query: 403 QQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKT 448
+ + D ++ ++ +NG+ A + + +L + A T
Sbjct: 574 EVLFKSDQFHPYS--IVQNNGLIYWADNKNSTILRFHAHQANLSST 617
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 21/140 (15%)
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
+FW+D +N I G+ II+T I P G +D R +YF+ + I C L
Sbjct: 1449 IFWSDIQQN-EISSAGISNGLIEPIINTNIEKPYGFAVDWIARNMYFSSGQ---IKCNIL 1504
Query: 268 EIKTNVNYSTIFR----------------KLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+ +I K+YWI +G ++ ++N+DGS+ S++
Sbjct: 1505 ASNLKGEFVSIIHEDLNMVDSIVLDPANGKMYWIHSASDGSMSQLEQSNLDGSSRSLIYQ 1564
Query: 312 GQ-LYEALALDLENGMLYYS 330
+ ++L +D ++ LYY+
Sbjct: 1565 HENNLQSLTMDFDSQRLYYA 1584
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 9/74 (12%)
Query: 136 KDHRAQDIVVSGLDLVE--------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
+D ++ ++ L+LV G+A DW+ G+IYW D++ N IEV +G++R V+
Sbjct: 1778 RDGTQRETILEALNLVGYKQQDWLGGIAIDWVAGNIYWSDTKRNIIEVARLDGSHRYVVV 1837
Query: 188 KDNITQPRGMMLDP 201
N+ +P + +DP
Sbjct: 1838 S-NLEKPTALAVDP 1850
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 12/177 (6%)
Query: 78 GYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G C Q+C T + ++C C GY +E +N T F I + + D E+
Sbjct: 1677 GGCQQLCLATSSTDHVCRCALGYDVEPNNPTGCVPRAEFIFYSIDVLQGVEMIDPSEQFD 1736
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLAKDNITQPR 195
+ +S + + Y +YW D+ L I +GT R +L N+ +
Sbjct: 1737 TPSPALVPISRVSSASFIDYLANTDTLYWGDNELGSISRVKRDGTQRETILEALNLVGYK 1796
Query: 196 ------GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 246
G+ +D G ++W+D N IE +DGS+R ++S + P L +D
Sbjct: 1797 QQDWLGGIAIDWVAGN--IYWSDTKRN-IIEVARLDGSHRYVVVS-NLEKPTALAVD 1849
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 114/284 (40%), Gaps = 57/284 (20%)
Query: 70 DMNEC-EQPGYCSQMCT-NTKGSYICSC----------------NEGYVL---------- 101
D N C E G CS +C + +G++ C C NE +L
Sbjct: 1356 DRNPCGENNGGCSHLCLLSGRGTFKCECPHVMRLDPANERNCVPNEQVLLFVMVDEIRGI 1415
Query: 102 ---EYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLD--LVE---- 152
+ ++HT I S L+ R LV + D + +I +G+ L+E
Sbjct: 1416 DLHQPNHHTIPTIRQSPR-LVAPQRIDFLVDESRIFWSDIQQNEISSAGISNGLIEPIIN 1474
Query: 153 -------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
G A DWI ++Y+ ++ + + + +++ ++LDP+ G
Sbjct: 1475 TNIEKPYGFAVDWIARNMYFSSGQIKCNILASNLKGEFVSIIHEDLNMVDSIVLDPANGK 1534
Query: 206 R-WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA--DSKLDFI 262
W+ G ++E+ +DGS+RS I + LT+D ++R+Y+A +S + +
Sbjct: 1535 MYWIHSASDGSMSQLEQSNLDGSSRSLIYQHENNL-QSLTMDFDSQRLYYAYDNSGIAYY 1593
Query: 263 DCKSLEIK--------TNVNYSTIFRKLYWIDEGGNGVPLKIGK 298
D E + T+++ T++ + E V ++ K
Sbjct: 1594 DIPRNETRKVLVASPITSISSLTVYNGTLYFPENIQSVIMQCEK 1637
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 14/102 (13%)
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
+FW+D +N I G+ II+T I P G +D R +YF+ ++ CN
Sbjct: 1449 IFWSDIQQN-EISSAGISNGLIEPIINTNIEKPYGFAVDWIARNMYFSSGQIK----CN- 1502
Query: 398 DGTGRQQVILIDLMVEFTNDLMGD-NGVPALALDLENGMLYY 438
++ +L EF + + D N V ++ LD NG +Y+
Sbjct: 1503 -------ILASNLKGEFVSIIHEDLNMVDSIVLDPANGKMYW 1537
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 343 WGENP--RIERIGMDGSNRSTIIST-------KIYWPNGLTLDIATRRVYFADSKLDFID 393
WG+N I R+ DG+ R TI+ + W G+ +D +Y++D+K + I+
Sbjct: 1765 WGDNELGSISRVKRDGTQRETILEALNLVGYKQQDWLGGIAIDWVAGNIYWSDTKRNIIE 1824
Query: 394 FCNYDGTGRQQVI 406
DG+ R V+
Sbjct: 1825 VARLDGSHRYVVV 1837
>gi|195567006|ref|XP_002107066.1| GD17251 [Drosophila simulans]
gi|194204463|gb|EDX18039.1| GD17251 [Drosophila simulans]
Length = 1704
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 167/379 (44%), Gaps = 88/379 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGA-LCTCPPGEILSN 63
CV+ +CDG +CP G DE +C C C T G C C G ++
Sbjct: 504 CVHQKHICDGHNECPAGEDEADCPKERKCSEP-SPCEQLCIETTAGLNECACRLGYVMDK 562
Query: 64 DSVTCQDMNECE--QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+ V C D++EC+ CSQ C NT GS+ CSC GY+L D +CKA+ + L+ +
Sbjct: 563 NKVNCTDIDECQYLTSPVCSQKCHNTMGSFKCSCETGYILRPDLRSCKALGGAMTLLVAN 622
Query: 122 -----------NRHSILVADLE---------EKG-----------------KDHRAQDIV 144
NR++ +V L KG R +D++
Sbjct: 623 RWDIRRVTLSNNRYTAIVKGLHNAIALDFHHRKGLMFWSDVSTDVIKMVYMNGTRVRDVI 682
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
GL+ G+A DWI ++W DS R+EV + G R V+A ++ +PR +++ PG
Sbjct: 683 KWGLESPGGIAVDWIHDLLFWTDSGTRRVEVSNFQGNLRTVIASYDLDKPRAIVV--HPG 740
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
FW+DWG NP+IER MDG+ R IIS + WPNGL +D ++Y+AD+K I+C
Sbjct: 741 EALAFWSDWGPNPKIERAYMDGTQRKVIISKGVTWPNGLAIDFPNSKIYWADAKQHAIEC 800
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
+N+DGS+ + ++S L AL L
Sbjct: 801 ----------------------------------SNLDGSDRNKILSTHLPHPFALTLFE 826
Query: 325 GMLYYSTLKCTRWLFWTDW 343
+Y WTDW
Sbjct: 827 DTMY-----------WTDW 834
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 141/356 (39%), Gaps = 91/356 (25%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA--------------------------- 110
G CS +C K S C C G L+ D TCK+
Sbjct: 887 GGCSHLCLPNKTSRRCGCPIGLSLKEDGKTCKSTADKLVLVARRKDIRLRHLRDNQADPN 946
Query: 111 ----------INHSAAFLIISNRHSILVADLEEK--GKDH----RAQDIVVSGLDLVEGL 154
+ H+ A S+ I D+E K H Q +V S L GL
Sbjct: 947 DVDMIVPLDNLKHAVALDWCSDTDFIYWTDVERSTINKAHLNGSYQQRVVHSNLVSPVGL 1006
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DWI +YW D NRIEV NG R +L + + +PR ++++P G ++FW+DWG
Sbjct: 1007 ALDWITDKLYWTDPSTNRIEVATTNGKMRTLLIWEKLYKPRDIVVNPIEG--FMFWSDWG 1064
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
++P IER MDG R TI S K+ +PNGL +D ++YF D K+LE
Sbjct: 1065 DDPMIERANMDGRERVTITSKKLIYPNGLAIDYEKSKIYFVDGGT-----KTLE------ 1113
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
N DGS ++++G L LD+ G
Sbjct: 1114 -----------------------NMNFDGSGRQVILNG-LGHPFGLDVNEGR-------- 1141
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 390
+FWTDW + + G + + II+ + RR++ A KL+
Sbjct: 1142 ---VFWTDWDTKSVMSANKLTGKDTNVIIANSTDLMDIRVFHRTRRRIFNACDKLN 1194
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 110/233 (47%), Gaps = 42/233 (18%)
Query: 71 MNECEQ-PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK-------------------- 109
N C++ G CS +C SY C+C G L+ D HTC
Sbjct: 1187 FNACDKLNGGCSHLCLLNPTSYTCACTVGVQLKEDRHTCSEGPTQYILFAHRIDIRQISL 1246
Query: 110 -------------AINHSAAFLIISNRHSILVAD------LEEKGKDHRAQDIVVSGLDL 150
I+++ A + I +D + Q IV L+
Sbjct: 1247 DFDHLIDVVLPLPPISNAVALDVDRKTGYIYWSDTIENVIMSSSPDGLHVQKIVGDSLEN 1306
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
+GL D IG IYW D+ + IEV +G+NR V+A ++ PRG+ LD G LFW
Sbjct: 1307 PDGLVVDSIGRTIYWADAGRHTIEVASLDGSNRHVIAYKDLESPRGLALDYEAGL--LFW 1364
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
TDWG +IER +DG+ RS I++ + WPNGL+LD+ ++R+Y+ D++L ID
Sbjct: 1365 TDWGHYRKIERSHLDGNERSRIVTANLGWPNGLSLDLKSKRIYWVDARLKTID 1417
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 172/449 (38%), Gaps = 110/449 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGP---GCDLAE--CKHK-----FGLCSNTCHPTPLGALC 53
RC+ T +CDG DC G DE CDL + C K +C + H +C
Sbjct: 458 RCILKTWLCDGYPDCAAGEDEVECHLQCDLGQFLCPTKQNLTNLKICVHQKH------IC 511
Query: 54 ----TCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTC 108
CP GE D C +C +P C Q+C T G C+C GYV++ + C
Sbjct: 512 DGHNECPAGE----DEADCPKERKCSEPSPCEQLCIETTAGLNECACRLGYVMDKNKVNC 567
Query: 109 ----------------KAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVE 152
K N +F IL DL R+ + + L+
Sbjct: 568 TDIDECQYLTSPVCSQKCHNTMGSFKCSCETGYILRPDL-------RSCKALGGAMTLLV 620
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
+D I + NR + N I L + +G+M FW+D
Sbjct: 621 ANRWD-----IRRVTLSNNRYTAIVKGLHNAIAL---DFHHRKGLM----------FWSD 662
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN 272
+ I+ + M+G+ +I + P G+ +D
Sbjct: 663 VSTDV-IKMVYMNGTRVRDVIKWGLESPGGIAVDW------------------------- 696
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
I L+W D G V + +N G+ +++ S L + A+ + G
Sbjct: 697 -----IHDLLFWTDSGTRRVEV----SNFQGNLRTVIASYDLDKPRAIVVHPGEAL---- 743
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
FW+DWG NP+IER MDG+ R IIS + WPNGL +D ++Y+AD+K I
Sbjct: 744 -----AFWSDWGPNPKIERAYMDGTQRKVIISKGVTWPNGLAIDFPNSKIYWADAKQHAI 798
Query: 393 DFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+ N DG+ R +++ L F L D
Sbjct: 799 ECSNLDGSDRNKILSTHLPHPFALTLFED 827
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 41 SNTCHPTPLGALCTCPPGEILSNDSVT-CQDMNECEQPGYCSQMCTNTKGSYICSCNEGY 99
S+ C P G C CP G L +S T CQ++ E Y + G + S N G
Sbjct: 1504 SHLCLRNPSGYSCQCPIGLRLRQNSTTQCQNLPE----DYL--LIALRSGIGMISLNSGD 1557
Query: 100 VLEYDNHTCKAIN--HSAAFLIISNRHSILV-AD-----LEEKGKDHRAQDIVVSGLDLV 151
++ IN H A L R ++L AD + + + V+ G D++
Sbjct: 1558 FMD----VVLPINGVHGAVVLDYHYRKNLLFFADVNLDVIRRVNLLNLTESKVIVGTDVL 1613
Query: 152 --EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
G+A DWI ++YW D+ IEV +G+ R + +DN+ PR +++ P +LF
Sbjct: 1614 TPNGIAVDWIADNLYWSDTDRKLIEVSRLDGSCRKRIVEDNLGDPRSLIVHPKKA--YLF 1671
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 242
W+DW +IER +DGSNR II++ I +P
Sbjct: 1672 WSDWSSPAKIERSYLDGSNRRVIITSGIGFPQA 1704
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 139/327 (42%), Gaps = 42/327 (12%)
Query: 131 LEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E D R + + S L GLA D+ IY++D +E + +G+ R V+ +
Sbjct: 1069 IERANMDGRERVTITSKKLIYPNGLAIDYEKSKIYFVDGGTKTLENMNFDGSGRQVIL-N 1127
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
+ P G LD + G +FWTDW + + G + + II+ +
Sbjct: 1128 GLGHPFG--LDVNEGR--VFWTDWDTKSVMSANKLTGKDTNVIIANSTDLMDIRVFHRTR 1183
Query: 250 RRVYFADSKLDFIDCKSLEIKTNVNYS---TIFRKL----YWIDEG-------GNGVPLK 295
RR++ A KL+ C L + +Y+ T+ +L + EG + + ++
Sbjct: 1184 RRIFNACDKLNG-GCSHLCLLNPTSYTCACTVGVQLKEDRHTCSEGPTQYILFAHRIDIR 1242
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
+ D +L + A+ALD++ + T +++W+D EN I D
Sbjct: 1243 QISLDFDHLIDVVLPLPPISNAVALDVD---------RKTGYIYWSDTIENV-IMSSSPD 1292
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFT 415
G + I+ + P+GL +D R +Y+AD+ I+ + DG+ R + DL
Sbjct: 1293 GLHVQKIVGDSLENPDGLVVDSIGRTIYWADAGRHTIEVASLDGSNRHVIAYKDL----- 1347
Query: 416 NDLMGDNGVPALALDLENGMLYYSTEG 442
LALD E G+L+++ G
Sbjct: 1348 ------ESPRGLALDYEAGLLFWTDWG 1368
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 121/283 (42%), Gaps = 36/283 (12%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
IV + L GL+ D IYW+D+RL I+ CD G R ++ ++ P + L
Sbjct: 1386 IVTANLGWPNGLSLDLKSKRIYWVDARLKTIDSCDYTGNQRKLIMS-SLHHPYALALSDD 1444
Query: 203 PGTRWLFWTDWGENP--RIERIGMDG-----SNRSTIISTKIYW--PNGLTLDIATRRVY 253
++WTDW ER + +N ++ KI + N T+ A
Sbjct: 1445 N----IYWTDWKSKALHMTERRNISAKRDIITNIDGLMDIKIIYQNQNQSTMKNACGNNN 1500
Query: 254 FADSKLDFID-----CK-SLEIKTNVNYSTIFRKL---YWIDEGGNGVPLKIGKANMDGS 304
S L + C+ + ++ N +T + L Y + +G+ + I + D
Sbjct: 1501 GNCSHLCLRNPSGYSCQCPIGLRLRQNSTTQCQNLPEDYLLIALRSGIGM-ISLNSGDFM 1559
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG-MDGSNRSTII 363
+ + ++G ++ A+ LD Y L LF+ D + I R+ ++ + I+
Sbjct: 1560 DVVLPING-VHGAVVLDYH----YRKNL-----LFFADVNLDV-IRRVNLLNLTESKVIV 1608
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
T + PNG+ +D +Y++D+ I+ DG+ R++++
Sbjct: 1609 GTDVLTPNGIAVDWIADNLYWSDTDRKLIEVSRLDGSCRKRIV 1651
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 61/147 (41%), Gaps = 29/147 (19%)
Query: 242 GLTLDIATRR--VYFADSKLDFIDCKSL----EIKTNVNYST----------IFRKLYWI 285
+ LD R+ ++FAD LD I +L E K V I LYW
Sbjct: 1571 AVVLDYHYRKNLLFFADVNLDVIRRVNLLNLTESKVIVGTDVLTPNGIAVDWIADNLYWS 1630
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
D + + + +DGS +V L + +L + Y LFW+DW
Sbjct: 1631 DTDRKLIEV----SRLDGSCRKRIVEDNLGDPRSLIVHPKKAY---------LFWSDWSS 1677
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNG 372
+IER +DGSNR II++ I +P
Sbjct: 1678 PAKIERSYLDGSNRRVIITSGIGFPQA 1704
>gi|47229539|emb|CAG06735.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2465
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 170/357 (47%), Gaps = 84/357 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECK-----HKFGL-------------------- 39
C++++++C+G DC +G DEGP C + + F L
Sbjct: 74 CIHMSRLCNGVPDCTDGWDEGPHCRGSAARAVHFPETFTLSCSEEAPLTGRRRELITNCS 133
Query: 40 ---CSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCN 96
C +C TP G+ C C G + D C+D +EC G CSQ CTNT G Y CSC
Sbjct: 134 LRGCQESCGITPTGSACYCKSGYEIGPDGKACKDFDECSVYGTCSQSCTNTNGGYTCSCV 193
Query: 97 EGYVLEYDNHTCKAINHSA---AFLIISNRHSILVADL---------------------- 131
EGY+ + DN +CKA N L+I+N +I L
Sbjct: 194 EGYLPQPDNRSCKAKNVPVDRLPVLLIANSQNIQATSLSGTTVHSLLSTTTKQTTAMDFL 253
Query: 132 --EEKG----------------------KDHRAQDIVVSGLDL--VEGLAYDWIGGHIYW 165
EEK K + I+ L L VE +A DW+ G+ Y+
Sbjct: 254 YAEEKVCWIHVGDAPPSTHLKCARIPNLKSFTEERIINISLSLHHVEQMAVDWLTGNFYF 313
Query: 166 LDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD 225
+D +RI VCD+NG + L + P+G+ LDP+ G +F+TD+G+ P++ER MD
Sbjct: 314 VDDVDDRIFVCDKNGQTCVTLLDQELYNPKGIALDPTVGK--VFFTDYGQIPKVERCDMD 371
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
G NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ E K N TI + L
Sbjct: 372 GQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGK---NRHTIIQGL 425
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 150/304 (49%), Gaps = 51/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+G DCP+G+DE CDL C + G CS+ C P G +C+CP G L
Sbjct: 1253 CLPPEKLCNGADDCPDGSDEKL-CDL--CSLENGDCSHNCTVAPGEGVICSCPLGMELGP 1309
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
++ TCQ + C + CSQ C K S CSC EG+ LE D CK+ + F+I SNR
Sbjct: 1310 NNKTCQIQSFCAKHLKCSQRCQQDKFSVKCSCYEGWELEPDMENCKSTDPFKPFIIFSNR 1369
Query: 124 HSILVADLEE-------------------------------KGKDHRAQ----------D 142
H I DL + + K +R + D
Sbjct: 1370 HEIRRIDLNKGEFSVLVPGLRNTIALDFHLNQSALYWTDVVEDKIYRGKLSENGALTSFD 1429
Query: 143 IVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V+ GL EGLA DWI G+IYW++S L++IEV +GT R L + PR + LDP
Sbjct: 1430 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMRTTLLAGEVEHPRAIALDP 1489
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIY--WPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G R TI WPNGLT+D RR+ + D++
Sbjct: 1490 RDGI--LFWTDWDASMPRIEAASMSGEGRKTIHKETGNGGWPNGLTVDYLERRILWIDAR 1547
Query: 259 LDFI 262
D I
Sbjct: 1548 SDAI 1551
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 160/376 (42%), Gaps = 72/376 (19%)
Query: 78 GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + C C GY L +C+ + +FL+ S I L+ K
Sbjct: 2003 GDCSQLCLPTSPTTRACMCTAGYSLRTGQQSCEGV---GSFLLYSVHEGIRGIPLDPSDK 2059
Query: 137 ----------------DHRAQ-------------------------DIVVSGLDLVEGLA 155
D A+ D+V +G+ VEG+A
Sbjct: 2060 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 2119
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 2120 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPERG--YLFWTEWGQ 2177
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV-YFADSKLDFIDCKSLEIKTNVN 274
PRIER +DGS R+ +++ I WPNG+++D R+ F+ S F ++
Sbjct: 2178 YPRIERSRLDGSERAVLVNVSISWPNGISIDYEVRQTGLFSHSPPLFNGADGFASTVLLS 2237
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMD-GSNASILVSGQLYEALALDLENGMLYYSTLK 333
LYW D + KI + N++ G N ++++ N M +S
Sbjct: 2238 VHVQENLLYWCDARTD----KIERINLETGENREVVLA-----------SNNMDMFSVSV 2282
Query: 334 CTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
+++W+D N I+R D + S + T G+ + + +V F ++
Sbjct: 2283 FESYIYWSDRTHANGSIKRGSKDNATDSVSLRT------GIGVQLKDIKV-FNRARQQGT 2335
Query: 393 DFCNYDGTGRQQVILI 408
+ C + G +Q+ L
Sbjct: 2336 NVCKVNNGGCEQLCLF 2351
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 111/248 (44%), Gaps = 56/248 (22%)
Query: 70 DMNECEQPGYCSQMCT--NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL 127
++++ + G CS +C N + C C G+ L D +CK H + R ++
Sbjct: 496 ELDQFGKAGGCSDICLLGNGHKTRTCRCRSGFSLGSDGKSCKKPEHELFLVYGKGRPGVI 555
Query: 128 VA-DLEEKGKDH-----------RAQD------------------------------IVV 145
D+ K D RA D IV
Sbjct: 556 RGMDMNAKVPDEYMIPIENLMNPRALDFHAESEFIYFADATSYIIGRQKIDGSERDTIVK 615
Query: 146 SGLDLVEGLAYDWIGGHIYWLD---SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
G+ +VEG+A DW+ ++YW D + + ++ R L + IT PR +++DP
Sbjct: 616 EGIHIVEGIAVDWMADNLYWTDDGPKKTISVARLEKASQTRKTLIEGKITHPRAIVVDPL 675
Query: 203 PGTRWLFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFA 255
G W++WTDW E+P RIER MDGSNR+ +S+K + WPNGL+LD+ +Y+
Sbjct: 676 NG--WMYWTDWEEDPKESKRGRIERAWMDGSNRNMFLSSKTVLWPNGLSLDVPQGILYWV 733
Query: 256 DSKLDFID 263
D+ D I+
Sbjct: 734 DAFYDRIE 741
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 112/269 (41%), Gaps = 43/269 (15%)
Query: 80 CSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH 138
CS +C N ++ C+C L D C FL+ + + I D++ ++
Sbjct: 1671 CSHLCLINYNQTFSCACPHLMKLGPDRRNCYEFRQ---FLLYARQIEIRGVDIDNPYYNY 1727
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
V +D V + YD + IYW D R I+ NGT + ++ G+
Sbjct: 1728 IIS-FTVPDIDNVTVVDYDALEHRIYWSDVRTQTIKRAFINGTGVETVVSADLPNAHGLA 1786
Query: 199 LDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIIS--------------TKIYWPNGL 243
+D +R LFWT + N + I +DGS ++ +I K+YW +G
Sbjct: 1787 VDWV--SRNLFWTSYDANKKQINVARLDGSFKNAVIQGLDKPHCLVLHPVLGKLYWTDGD 1844
Query: 244 TLDIA-----TRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGK 298
T+++A R + F + K + ++++ T LYWI G + I +
Sbjct: 1845 TINMANTDGSNRSILFTNQK--------GPVGLSIDFDT--EALYWISSGNS----TINR 1890
Query: 299 ANMDGSNASIL--VSGQLYEALALDLENG 325
+DGS +L G+L +A AL + G
Sbjct: 1891 CKLDGSGLEVLEGTKGKLTKATALAIMGG 1919
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 18/169 (10%)
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
+ +IYW + T I +R + + ++ + L + + R L+W N
Sbjct: 1747 LEHRIYWSDVRTQTI--KRAFINGTGVETVVSADLPNAHGLAVDWVSRNLFWTSYDAN-- 1802
Query: 293 PLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+I A +DGS + ++ G LD + ++ + L L+WTD I
Sbjct: 1803 KKQINVARLDGSFKNAVIQG-------LDKPHCLVLHPVLG---KLYWTD---GDTINMA 1849
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
DGSNRS I+ T P GL++D T +Y+ S I+ C DG+G
Sbjct: 1850 NTDGSNRS-ILFTNQKGPVGLSIDFDTEALYWISSGNSTINRCKLDGSG 1897
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE-RIG 353
+I + +++ S+LV G L +ALD L S L +WTD E+ ++
Sbjct: 1371 EIRRIDLNKGEFSVLVPG-LRNTIALDFH---LNQSAL------YWTDVVEDKIYRGKLS 1420
Query: 354 MDGSNRS--TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
+G+ S +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1421 ENGALTSFDVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMR--------- 1471
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L G+ P A+ALD +G+L+++
Sbjct: 1472 ---TTLLAGEVEHPRAIALDPRDGILFWT 1497
>gi|47228667|emb|CAG07399.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2304
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 164/329 (49%), Gaps = 57/329 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ ++++CDG DC +G DEGP C C C T G C C G ++ D
Sbjct: 66 CIPMSRLCDGVPDCTDGWDEGPHCREQAPACIAQRCQFNCSVTHDGPRCYCSAGYEVTAD 125
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLIIS 121
TC+D NEC G CSQ C+NT+GSY CSC EGY+L+ DN +CKA N L+I+
Sbjct: 126 GRTCKDFNECNVYGTCSQTCSNTEGSYTCSCVEGYLLQPDNRSCKAKNDPVDRLPMLLIA 185
Query: 122 NRHSILVADL---------------------------------EEKGKDH---------- 138
N H I L E H
Sbjct: 186 NLHDIRCTTLSGALSRLHAITTKQTMAMDFIYADETVCWIDVGETPAATHLKCASIPDLK 245
Query: 139 -----RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
R +I +S L VE +A DW+ + Y++D +R+ VC+++G + L ++
Sbjct: 246 TVTNIRTINITLS-LHHVEQMAIDWLTKNFYFVDDVDDRVFVCNKDGQTCVTLLDQDLYN 304
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
P+G+ LDP+ G +F+TD+G PR+ER MDG NR+ ++ TKI +P+G+TLD+ R VY
Sbjct: 305 PKGIALDPAMGK--VFFTDYGSTPRVERCDMDGQNRTKLVDTKIVFPHGITLDLVNRLVY 362
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
+AD+ LD+I+ E K N TI + L
Sbjct: 363 WADAYLDYIEVVDYEGK---NRHTIIQGL 388
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 146/304 (48%), Gaps = 51/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DCP+G+DE CDL C G CS+ C P G +C+CP G L
Sbjct: 1189 CLPAEKLCDGTDDCPDGSDEKL-CDL--CALDNGGCSHNCTIIPGEGFMCSCPLGMELGA 1245
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+ LE D +CK+ + F+I SNR
Sbjct: 1246 DNKTCQIQSFCAKHLKCSQKCEQEKSSVKCSCYEGWELEADMESCKSTDPFKPFIIFSNR 1305
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1306 HEIRRIDLHKGEFSVLVPGLRNTIALDFHLSESTLYWTDVVEDKIYRGKLSENGALTSFE 1365
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L + PR + LDP
Sbjct: 1366 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMRTTLLAGEVEHPRAIALDP 1425
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G R TI + WPNGLT+D RR+ + D++
Sbjct: 1426 RDGI--LFWTDWDASLPRIEAASMSGEGRRTIHRETGSGGWPNGLTVDYMERRIVWIDAR 1483
Query: 259 LDFI 262
D I
Sbjct: 1484 SDAI 1487
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 134/305 (43%), Gaps = 65/305 (21%)
Query: 78 GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + C C GY L+ +C+ + +FL+ S I L+ K
Sbjct: 1878 GDCSQLCLPTSPTTRACMCTAGYSLKSGQQSCEGM---GSFLLFSVHEGIRGIPLDPADK 1934
Query: 137 ----------------DHRAQ-------------------------DIVVSGLDLVEGLA 155
D A+ D+V +G+ VEG+
Sbjct: 1935 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIT 1994
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + PS G +LFWT+WG+
Sbjct: 1995 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPSKG--YLFWTEWGQ 2052
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DGS R +++ I WPNG+++D +Y+ D++ D I+ +LE N
Sbjct: 2053 YPRIERSRLDGSQRLVLVNVSISWPNGISIDYEEGLLYWCDARTDKIERINLETGENREL 2112
Query: 273 ---------VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
S +YW D +K G + NA+ V QL + + L+
Sbjct: 2113 VLANNNMDMFAVSVFEEHIYWSDRTHANGSIKRGSKD----NATDAV--QLRTGIGVQLK 2166
Query: 324 NGMLY 328
+ ++
Sbjct: 2167 DIKVF 2171
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 109/242 (45%), Gaps = 56/242 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA-DLE 132
+ G CS +C +N+ + C C G+ L D +CK +H + R I+ D+
Sbjct: 465 KAGGCSDICLLSNSHKTRTCRCRSGFSLGSDGKSCKKPDHELFLVYGKGRPGIIRGMDMN 524
Query: 133 EKGKDH-----------RAQD------------------------------IVVSGLDLV 151
K D RA D I+ G+ V
Sbjct: 525 AKVPDEYMIPIENLMNPRALDFHAASEYIYFADATSYIIGRQKIDGTERDTILKEGIHTV 584
Query: 152 EGLAYDWIGGHIYWLD---SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
EG+A DW+GG++YW D + + ++ R L + ++ PR +++DP G W+
Sbjct: 585 EGIAVDWMGGNLYWTDDGPKKTISVARLEKASQTRKTLIEGKMSHPRAIVVDPQHG--WM 642
Query: 209 FWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLDF 261
+WTDW E+P +I++ MDGS+ +++K + WPNGL+LDI +Y+ D+ D
Sbjct: 643 YWTDWEEDPSESNRGKIKKAWMDGSHHQIFLTSKTVLWPNGLSLDIPQGILYWVDAYYDR 702
Query: 262 ID 263
I+
Sbjct: 703 IE 704
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 9/107 (8%)
Query: 300 NMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNR 359
N DG L+ LY + L+ M +F+TD+G PR+ER MDG NR
Sbjct: 288 NKDGQTCVTLLDQDLYNPKGIALDPAMGK---------VFFTDYGSTPRVERCDMDGQNR 338
Query: 360 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ ++ TKI +P+G+TLD+ R VY+AD+ LD+I+ +Y+G R +I
Sbjct: 339 TKLVDTKIVFPHGITLDLVNRLVYWADAYLDYIEVVDYEGKNRHTII 385
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 130/330 (39%), Gaps = 58/330 (17%)
Query: 80 CSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH 138
CS +C N ++ C+C L+ D TCK S FL+ + + I D++ ++
Sbjct: 1574 CSHLCLINFNQTFSCACPHLMKLQPDKRTCK---ESRKFLLYARQIEIRGVDIDNPYYNY 1630
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
V +D V + YD + IYW D R I+ NGT + ++ G+
Sbjct: 1631 IIS-FTVPDIDNVTAVDYDAVEHRIYWSDVRTQTIKRAFINGTGVETVVSADLPNAHGLA 1689
Query: 199 LDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+D +R LFWT + N + I +DGS ++ +I
Sbjct: 1690 VDWV--SRNLFWTSYDANKKQINVARLDGSFKNAVI-----------------------Q 1724
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE- 316
LD C L I KLYW D G N I ANMDGSN + L +GQ
Sbjct: 1725 GLDKPHCLVLH--------PILGKLYWTD-GDN-----ISMANMDGSNHTTLFTGQKGPV 1770
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 376
L++D E LY W G N I R +DG+ + K L
Sbjct: 1771 GLSIDYEKDQLY-----------WISSG-NGTISRCQLDGTKLEIMEGVKGKLSKATALA 1818
Query: 377 IATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I ++++AD D I C+ G +V+
Sbjct: 1819 IMGDKLWWADQGSDQIGTCDKKDGGNWKVM 1848
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 126/350 (36%), Gaps = 91/350 (26%)
Query: 121 SNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG 180
+N+ I VA L D ++ V+ GLD L I G +YW D + I + + +G
Sbjct: 1704 ANKKQINVARL-----DGSFKNAVIQGLDKPHCLVLHPILGKLYWTDG--DNISMANMDG 1756
Query: 181 TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS---------- 230
+N L P G+ +D L+W G N I R +DG+
Sbjct: 1757 SNHTTLFTGQ-KGPVGLSIDYEKDQ--LYWISSG-NGTISRCQLDGTKLEIMEGVKGKLS 1812
Query: 231 -----TIISTKIYWPNGLTLDIAT---------------------RRVYFADSKLDFI-- 262
I+ K++W + + I T R+Y ++ I
Sbjct: 1813 KATALAIMGDKLWWADQGSDQIGTCDKKDGGNWKVMRNNTSPMMHMRIYDESAQKSGINL 1872
Query: 263 ------DCKSLEIKTN---------VNYSTIFRK----------LYWIDEGGNGVPLKIG 297
DC L + T+ YS + L+ + EG G+PL
Sbjct: 1873 CSNNNGDCSQLCLPTSPTTRACMCTAGYSLKSGQQSCEGMGSFLLFSVHEGIRGIPLDPA 1932
Query: 298 KANMDGSNASILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG 356
D S+A + VSG L + EN +Y W D G + I R D
Sbjct: 1933 ----DKSDALVPVSGTSLAVGIDFHAENDTIY-----------WVDMGLS-TISRAKRDQ 1976
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ R +++ I G+T+D +Y+ D D I+ +G+ R VI
Sbjct: 1977 TWREDVVTNGIGRVEGITVDWIAGNIYWTDQGFDVIEVARLNGSFRYVVI 2026
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE-RIG 353
+I + ++ S+LV G L +ALD L STL +WTD E+ ++
Sbjct: 1307 EIRRIDLHKGEFSVLVPG-LRNTIALDFH---LSESTL------YWTDVVEDKIYRGKLS 1356
Query: 354 MDGSNRS--TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
+G+ S +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1357 ENGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMR--------- 1407
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L G+ P A+ALD +G+L+++
Sbjct: 1408 ---TTLLAGEVEHPRAIALDPRDGILFWT 1433
>gi|363736013|ref|XP_422146.3| PREDICTED: low-density lipoprotein receptor-related protein 1B
[Gallus gallus]
Length = 4575
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/313 (35%), Positives = 160/313 (51%), Gaps = 55/313 (17%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCD--LAECKHKFGLCSNTCHPTPLGALCTCPPGE 59
++C++L+++C+G DC +G DEG C L C+ C C T G+ C C G
Sbjct: 64 TNKCIHLSQLCNGVYDCSDGYDEGVHCRELLPRCQQMN--CQYKCAITRNGSKCYCGDGY 121
Query: 60 ILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---A 116
SND +C D+NEC G CSQMC NT GSY CSC EGYVL+ DN +CKA N A
Sbjct: 122 ETSNDGRSCTDLNECNTYGSCSQMCVNTDGSYTCSCVEGYVLQPDNKSCKAKNEPADRPP 181
Query: 117 FLIISNRHSILVADLEEKGKDHR------------------------AQDI--------- 143
FL+I+N +I V L R ++D+
Sbjct: 182 FLLIANSETIEVLHLNGSKVSARTPVKGSSVLTLDYSYREDTICWIESRDLASQLKCTKI 241
Query: 144 -------------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
VV L V+ +A DWI G+ Y+LD +RI VC++NGT I L + +
Sbjct: 242 TKAGKLTDEWIINVVQYLHNVQQIAIDWITGNFYFLDHVSDRIFVCNQNGTVCITLIELD 301
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
++ P+ + +DP+ G LF+TD+G ++ER MDG NR+ I+ +KI P L LD+ +
Sbjct: 302 LSNPKAIAVDPTSGK--LFFTDYGNVAKVERCDMDGMNRTWIVDSKIEQPTALALDLINK 359
Query: 251 RVYFADSKLDFID 263
VY+ D LD ++
Sbjct: 360 YVYWVDIYLDNVE 372
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 182/420 (43%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGAL-CTCPPGEILSN 63
C+ K+C+G+ DCP+G+DEG CD EC G CS+ C P G + C+CP G LS
Sbjct: 1127 CLQPEKLCNGRRDCPDGSDEGDLCD--ECSLNNGGCSHQCSVVPGGRIVCSCPSGFNLSV 1184
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ M+ C + CSQ+C K + CSC EG+ L D C + + AF+I S R
Sbjct: 1185 DNKTCEIMDYCTKHLKCSQVCEQHKNNVKCSCYEGWKLSKDGENCISTDPFEAFIIFSIR 1244
Query: 124 HSILVADLEEKGKD--------------HRAQD--------------------------- 142
H I DL ++ H +Q
Sbjct: 1245 HEIRKIDLHKRDYSLLVPGLRNTIALDFHFSQSLLYWTDVVEDKIYRGKLSDTGGVSAIE 1304
Query: 143 -IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
IV GL EGL DWI G+IYW+DS L++IEV +GT R L + PR + LDP
Sbjct: 1305 VIVQHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGTLRTTLIAGAMEHPRAIALDP 1364
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R I WPNGLT+D +R+ + D++
Sbjct: 1365 RYGI--LFWTDWDANFPRIESASMSGAERKIIYKDMDTGAWPNGLTVDHFEKRIVWTDAR 1422
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG+ ++ G Y +
Sbjct: 1423 SDAI------------YSALY----------------------DGTGMIEIIRGHEYLSH 1448
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 1449 PFAVS---LYGSE------VYWTDWRTNTLAKANKWTGQNVSVIQKTSAQPFDLQIYHPS 1499
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 149/302 (49%), Gaps = 45/302 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ VC+ K DC +G+DE C + EC K CS C P+G C C PG L
Sbjct: 2879 KCIPQNNVCNNKEDCSDGSDE-KSCHINECLSKKVSGCSQDCQDLPVGYKCKCWPGFQLK 2937
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C +GY ++ DN + CK+++ FLI++
Sbjct: 2938 DDGKTCTDIDECSSGFPCSQQCINTYGTYKCLCADGYEIQPDNLNGCKSLSDEEPFLILA 2997
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
+ H I L ++G D+R + I
Sbjct: 2998 DHHEIRKISTDGSNYTLLKQGLNNVIAIDFDYREEFIYWIDSSRPNGSRINRMRLNGSDI 3057
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG VL + PR + LDP
Sbjct: 3058 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKVNGLYPTVLVSKRVKFPRDLSLDPQ 3117
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD-SKLDF 261
G +L+W D E P I R+GMDGS+++ +I T+I P LT+D R+Y+AD + ++F
Sbjct: 3118 AG--YLYWIDCCEYPHIGRVGMDGSSQTVVIETQISRPMALTIDYVNHRLYWADENHIEF 3175
Query: 262 ID 263
D
Sbjct: 3176 SD 3177
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 133/304 (43%), Gaps = 61/304 (20%)
Query: 64 DSVTCQDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D Q N C+ G CSQ+C T + + C C GY L+ + CK I +F++ S
Sbjct: 1805 DKAAQQGSNSCQFNNGGCSQLCLPTSESTRTCVCTVGYNLQKNRMACKGIE---SFIMYS 1861
Query: 122 NRHSILVADLEEKGK----------------DHRA------------------------- 140
I L+ K D A
Sbjct: 1862 VHEGIRGISLDPNDKMEALMPVSGTSFAVGIDFHAGNDTIYWTDMGFNKISRSKRDQTWK 1921
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+D+V +GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + +
Sbjct: 1922 EDVVTNGLGRVEGIAVDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIAVH 1981
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +LFWT+WG+ P I + +DGS + ++S I WPNG+++D ++Y+ D++ D
Sbjct: 1982 PEKG--YLFWTEWGQIPCIGKAYLDGSEKVVLVSLGIVWPNGISIDYEENKLYWCDARTD 2039
Query: 261 FIDCKSLEIKTN------------VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
I+ LE N + + +YW D ++ G N + ++A
Sbjct: 2040 KIERIDLESGGNREIVLSGSNVDMFSVAVFGAYIYWSDRAHANGSIRRGHKN-EATDAVT 2098
Query: 309 LVSG 312
+ +G
Sbjct: 2099 MRTG 2102
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 133/328 (40%), Gaps = 74/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLA----ECKHKFGLCSNT--CHPTPLGALCTCPP 57
+C+ + CD DC +G+DE C ++ C+ C + C+ T LC C P
Sbjct: 3749 KCIPMELQCDWFDDCGDGSDE-QDCKISVTEYTCEDNVNPCGDDAYCNQTKTSLLCQCKP 3807
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G + + C+D+NEC G CSQ C N KGSY C+C + Y E++N +CKA
Sbjct: 3808 GFQRNEMNRQCEDINECMVFGACSQHCNNVKGSYRCACEKNY-KEWNN-SCKAKGSEEQV 3865
Query: 118 LIISNRHSIL------------------------------------------------VA 129
L ++N IL
Sbjct: 3866 LYVANDTDILGFAYPFNYSDVHQQISHIEHNSRITGMDAYFQGNMIVWSTQFNPGGIFYK 3925
Query: 130 DLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD-SRLN--------------RIE 174
L +K K ++ G+A DWI G+IYW D SR++ I
Sbjct: 3926 KLHDKEKRQSNSGLICPEFKRPRGIAVDWIAGNIYWTDHSRMHWFSYYTTHWTSLRYSIN 3985
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V NG N L +P + ++P G ++WT G+ IE MDG+ R ++
Sbjct: 3986 VGQLNGPNCTRLLTSIAGEPYAIAVNPKKGM--MYWTVIGDRSHIEESSMDGTLRRILVQ 4043
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D ++R+++AD +L I
Sbjct: 4044 KNLQRPTGLVVDQFSQRLFWADFELSVI 4071
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 107/240 (44%), Gaps = 55/240 (22%)
Query: 77 PGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA-DLEE 133
PG CS +C ++ + C C G++L D +CK + R I+ DL
Sbjct: 460 PGGCSHICLLSSNYKTRTCRCRTGFILGSDGRSCKRPKNELFLFYGKGRPGIIRGMDLNT 519
Query: 134 KGKDH-----------RAQD------------------------------IVVSGLDLVE 152
K D RA D I+ LD VE
Sbjct: 520 KVSDEYMIPIENLVNPRALDFHAETNYIYFADTTSFLIGRQKIDGTERETILKDDLDNVE 579
Query: 153 GLAYDWIGGHIYWL-DSRLNRIEVC--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
G+A DWIG ++YW D I V ++ +R L + +++ PRG+++DP G W++
Sbjct: 580 GIAVDWIGNNLYWTNDGHRKTISVARLEKAAQSRKTLLEGDMSHPRGIVVDPVNG--WMY 637
Query: 210 WTDWGENP------RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
WTDW E+ RIE+ MDG +R +++K+ WPNGLTLD +Y+ D+ D I+
Sbjct: 638 WTDWEEDEIDDSVGRIEKAWMDGYSRQIFVTSKMLWPNGLTLDYHANVLYWCDAYYDHIE 697
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 131/336 (38%), Gaps = 59/336 (17%)
Query: 75 EQPGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEE 133
E G CS MC + S C+C L D TC FL+ + R I D++
Sbjct: 1512 EGRGPCSHMCLISHNRSAACACPHLMKLSLDKKTCY---ERKKFLLYARRSEIRGVDIDN 1568
Query: 134 KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
+ V +D V + +D + +YW D + I+ NGT + +I
Sbjct: 1569 PYFNFITA-FTVPDIDDVTVIDFDAVEERLYWTDVKTQTIKRAFINGTGLETIISRDIQS 1627
Query: 194 PRGMMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
RG+ +D +R L+W + + +I +DGS +++II
Sbjct: 1628 IRGLAVDWI--SRNLYWISSEFDETQINVAHLDGSLKTSII------------------- 1666
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+D C ++ + KLYW D GN + + ANMDGSN+ IL
Sbjct: 1667 ----HGIDKPQCLAVH--------PVKGKLYWTD--GNTINM----ANMDGSNSKILFQN 1708
Query: 313 QLYE-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
Q L++D LY W G N I R +DG N I S K P
Sbjct: 1709 QKDPVGLSIDYVENKLY-----------WISSG-NGTINRCNLDGGNLEIIDSMKEDLPK 1756
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
L I +++++AD L I CN GR IL
Sbjct: 1757 ATALTIMDKKLWWADQNLAQIGTCN-KRDGRNPTIL 1791
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E P I R + G N IIST I PNGLT+D ++YF+D L
Sbjct: 2304 ECQNLMFWTNWNEQLPSIMRSTLSGKNAQVIISTDILTPNGLTIDHRAEKLYFSDGSLGK 2363
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 2364 IERCEYDGSQRYVIV 2378
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 17/131 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCT 335
I Y++D V +I N +G+ L+ L +A+A+D +G L
Sbjct: 270 ITGNFYFLDH----VSDRIFVCNQNGTVCITLIELDLSNPKAIAVDPTSGKL-------- 317
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
F+TD+G ++ER MDG NR+ I+ +KI P L LD+ + VY+ D LD ++
Sbjct: 318 ---FFTDYGNVAKVERCDMDGMNRTWIVDSKIEQPTALALDLINKYVYWVDIYLDNVEVV 374
Query: 396 NYDGTGRQQVI 406
+Y+G R VI
Sbjct: 375 DYEGRKRHTVI 385
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 13/130 (10%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRL-----NRIEVCDENGTNR---IVLAKDNITQP 194
+++ + VEGLAY +YW S + ++ NR I +++D+ P
Sbjct: 2240 VLIENVGSVEGLAYHRAWDTLYWTSSTTSSITRHTVDQRRRGAFNREAVITMSEDD--HP 2297
Query: 195 RGMMLDPSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
+ LD +FWT+W E P I R + G N IIST I PNGLT+D ++Y
Sbjct: 2298 HVLALDEC--QNLMFWTNWNEQLPSIMRSTLSGKNAQVIISTDILTPNGLTIDHRAEKLY 2355
Query: 254 FADSKLDFID 263
F+D L I+
Sbjct: 2356 FSDGSLGKIE 2365
>gi|410968660|ref|XP_003990820.1| PREDICTED: low-density lipoprotein receptor-related protein 1B-like,
partial [Felis catus]
Length = 3453
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/425 (31%), Positives = 186/425 (43%), Gaps = 110/425 (25%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+G+ DCP+G+DEG CD EC G CSN C P G +C+CP G LS
Sbjct: 1132 CLQPEKLCNGRRDCPDGSDEGDLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPEGLRLSK 1189
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC EG+ L+ D +C +++ AF+I S R
Sbjct: 1190 DNKTCEIIDYCSNHLKCSQVCEQHKHTVKCSCYEGWKLDVDGESCTSVDPFEAFIIFSIR 1249
Query: 124 HSILVADLEEKGKDHRAQDIVVSGL------------------DLV-------------- 151
H I DL + R ++V GL D+V
Sbjct: 1250 HEIRRIDLHK-----RDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGG 1304
Query: 152 ---------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
EGL DWI G+IYW+DS L++IEV +G+ R L + PR
Sbjct: 1305 NFLVRIPKQYSLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRA 1364
Query: 197 MMLDPSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVY 253
+ LDP G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+
Sbjct: 1365 IALDPRYGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIV 1422
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+ D++ D I YS ++ DG+ ++ G
Sbjct: 1423 WTDARSDAI------------YSALY----------------------DGTGMIEIIRGH 1448
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------K 366
Y + + LY S ++WTDW N + G N S I T +
Sbjct: 1449 EYLSHPFAVS---LYGSE------VYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQ 1499
Query: 367 IYWPN 371
IY P+
Sbjct: 1500 IYHPS 1504
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 144/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +CD K DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 2884 RCIPSGGLCDSKDDCGDGSDE-RNCHINECLSKKVSGCSQDCQDLPVSYKCKCWPGFQLK 2942
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C +GY ++ DN + CK+++ FLI++
Sbjct: 2943 DDGKTCVDVDECSLGFPCSQQCINTYGTYKCFCTDGYEIQPDNPNGCKSLSDEEPFLILA 3002
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
+ H I L ++G D+R + I
Sbjct: 3003 DHHEIRKISTDGSNYTLLKQGLNNVIAIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDI 3062
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG +L + PR + LDP
Sbjct: 3063 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTILVSKKLKFPRDLSLDPR 3122
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +L+W D E P I R+GMDG+N+S +I TKI P LT+D RR+Y+AD
Sbjct: 3123 AG--YLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNRRLYWAD 3174
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 152/318 (47%), Gaps = 65/318 (20%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEG-------PGCDLAECKHKFGLCSNTCHPTPLGALCT 54
A++C++L+++C+G DC +G DEG P C C++K + N+ C
Sbjct: 69 ANKCIHLSRLCNGVLDCSDGYDEGLHCQELLPNCQQLNCQYKCAVVRNS-------TRCY 121
Query: 55 CPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHS 114
C G + D +C+D +EC G CSQ C NT GSY CSC EGY+++ DN +CKA N
Sbjct: 122 CEDGFEVKEDGRSCRDQDECAIYGACSQTCINTYGSYACSCVEGYIMQPDNRSCKAKNEP 181
Query: 115 A---AFLIISNRHSI-------------------------------LVADLEEKGKDHRA 140
L+I+N +I ++ +E + ++
Sbjct: 182 TDRPPMLLIANSETIEVFYLNGSKMATLSSVNGNEIHTLDFIYNEDMICWIESRESSNQL 241
Query: 141 QDI---------------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
+ I ++ V+ +A DW+ ++Y++D +RI VC NG+ +
Sbjct: 242 KCIQITKTGRLTEEWTINILQSFHNVQQMAIDWLTRNLYFVDHVSDRIFVCTYNGSVCVT 301
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
L + P+ + +DP G LF+TD+G ++ER MDG NR+ II +K P L L
Sbjct: 302 LIDLELHNPKSIAVDPIAGK--LFFTDYGNVAKVERCDMDGLNRTRIIDSKTEQPAALAL 359
Query: 246 DIATRRVYFADSKLDFID 263
D+ + VY+ D LD+++
Sbjct: 360 DLVNKLVYWVDLYLDYVE 377
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 126/287 (43%), Gaps = 60/287 (20%)
Query: 69 QDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
Q N C+ G CSQ+C T + + C C GY L+ + +C+ I +FL+ S I
Sbjct: 1815 QGNNSCQLNNGGCSQLCLPTSETTRTCMCTVGYYLQKNRMSCQGIE---SFLMYSVHEGI 1871
Query: 127 LVADLEEKGK----------------DHRAQ-------------------------DIVV 145
LE K D A+ DI+
Sbjct: 1872 RGIPLEPSDKMDALMPISGTSFAVGIDFHAENDTIYWTDMGFNKISRAKRDQTWKEDIIT 1931
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + + P G
Sbjct: 1932 NGLGRVEGIAIDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIAVHPEKG- 1990
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+LFWT+WG+ P I + +DGS + ++S I WPNG+++D ++Y+ D++ D I+
Sbjct: 1991 -YLFWTEWGQMPCIGKARLDGSEKVILVSMGITWPNGISIDYEENKLYWCDARTDKIERI 2049
Query: 266 SLEIKTN------------VNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
LE N + + +YW D ++ G N
Sbjct: 2050 DLETGGNREMVLSGSNVDMFSVAVFGAYIYWSDRAHANGSIRRGHKN 2096
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 88/156 (56%), Gaps = 13/156 (8%)
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL-DSRLNRIEV 175
++ ++ S L+ + G + + I+ LD VEG+A DWIG ++YW D I V
Sbjct: 551 YIYFADTTSFLIGRQKIDGTER--ETILKDDLDNVEGIAVDWIGNNLYWTNDGHRKTINV 608
Query: 176 C--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP------RIERIGMDGS 227
++ +R L + ++ PRG+++DP G W++WTDW E+ RIE+ MDG
Sbjct: 609 ARLEKASQSRKTLLEGEMSHPRGIVVDPVNG--WMYWTDWEEDEIDDSVGRIEKAWMDGF 666
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
NR +++K+ WPNGLTLD T +Y+ D+ D I+
Sbjct: 667 NRQIFVTSKMLWPNGLTLDFHTNTLYWCDAYYDHIE 702
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 128/339 (37%), Gaps = 99/339 (29%)
Query: 77 PGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK 134
PG CS +C +++ + C C G+ L D +C + R I
Sbjct: 465 PGGCSHICLLSSSYKTRTCRCRTGFNLGSDGRSCAGPKNELFLFYGKGRPGI-------- 516
Query: 135 GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
V G+DL +A +++ + +N+ P
Sbjct: 517 ----------VRGMDLNTKIADEYM--------------------------IPIENLVNP 540
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
R LD T ++++ D + I R +DG+ R TI+ + G+ +D
Sbjct: 541 RA--LDFHAETNYIYFAD-TTSFLIGRQKIDGTERETILKDDLDNVEGIAVDW------- 590
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
I LYW ++G + + + + L+ G++
Sbjct: 591 -----------------------IGNNLYWTNDGHRKT-INVARLEKASQSRKTLLEGEM 626
Query: 315 YE--ALALDLENGMLYYSTLKCTRWLFWTDWGENP------RIERIGMDGSNRSTIISTK 366
+ +D NG W++WTDW E+ RIE+ MDG NR +++K
Sbjct: 627 SHPRGIVVDPVNG-----------WMYWTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSK 675
Query: 367 IYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+ WPNGLTLD T +Y+ D+ D I+ +GT R+ V
Sbjct: 676 MLWPNGLTLDFHTNTLYWCDAYYDHIEKVFLNGTHRKIV 714
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G N ++ST I PNGLT+D ++YF+D L
Sbjct: 2309 ECQNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDHRAEKLYFSDGSLGK 2368
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 2369 IERCEYDGSQRYVIV 2383
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 138/310 (44%), Gaps = 39/310 (12%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS MC N S C+C L D TC + FL+ + R I D++
Sbjct: 1520 GPCSHMCLINHDRSAACACPHLMKLSSDKKTCYEMK---KFLLYARRSEIRGVDIDNPYF 1576
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ V +D V + +D +YW D + I+ NGT + +I RG
Sbjct: 1577 NFITA-FTVPDIDDVTVIDFDASEERLYWTDIKTQTIKRAFINGTGLETVISRDIQSIRG 1635
Query: 197 MMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIIS--------------TKIYWPN 241
+ +D +R L+W + + +I +DGS +++II K+YW +
Sbjct: 1636 LAVDWV--SRNLYWVSSEFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD 1693
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
G T+++A + ++SK+ F + K + +++Y + KLYWI GNG I + N+
Sbjct: 1694 GNTINMAN--MDGSNSKILFQNQKE-PVGLSIDY--VENKLYWI-SSGNGT---INRCNL 1744
Query: 302 DGSNASILVS--GQLYEALALDLENGMLYYSTLKCTRWLFWTDW-GENPRIERIGMDGSN 358
DG N ++ S +L +A AL + + L+++ + + G NP + R +
Sbjct: 1745 DGGNLEVIESMKEELTKATALTIMDKKLWWADQNLAQLGTCSKRDGRNPTVLR-----NK 1799
Query: 359 RSTIISTKIY 368
S ++ K+Y
Sbjct: 1800 TSGVVHMKVY 1809
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 17/131 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCT 335
+ R LY++D V +I +GS L+ +L+ +++A+D G L
Sbjct: 275 LTRNLYFVDH----VSDRIFVCTYNGSVCVTLIDLELHNPKSIAVDPIAGKL-------- 322
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
F+TD+G ++ER MDG NR+ II +K P L LD+ + VY+ D LD+++
Sbjct: 323 ---FFTDYGNVAKVERCDMDGLNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVEVV 379
Query: 396 NYDGTGRQQVI 406
+Y G R +I
Sbjct: 380 DYQGKNRHTII 390
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 96/224 (42%), Gaps = 33/224 (14%)
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++D L+WTD + I+R ++G+ T+IS I GL +D +R +Y+ S
Sbjct: 1592 VIDFDASEERLYWTDI-KTQTIKRAFINGTGLETVISRDIQSIRGLAVDWVSRNLYWVSS 1650
Query: 258 KLDFIDCKSLEIKTNVNYSTIFR--------------KLYWIDEGGNGVPLKIGKANMDG 303
+ D + ++ S I KLYW D GN + + ANMDG
Sbjct: 1651 EFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD--GNTINM----ANMDG 1704
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
SN+ IL Q E + L ++ Y K L+W G N I R +DG N I
Sbjct: 1705 SNSKILFQNQ-KEPVGLSID-----YVENK----LYWISSG-NGTINRCNLDGGNLEVIE 1753
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
S K L I +++++AD L + C+ GR +L
Sbjct: 1754 SMKEELTKATALTIMDKKLWWADQNLAQLGTCS-KRDGRNPTVL 1796
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 91/240 (37%), Gaps = 54/240 (22%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-----NRIEVCDENGTNR-IVLAKDNITQP 194
+ ++V + VEGLAY +YW S + ++ +R V+A P
Sbjct: 2243 RQVIVENVGSVEGLAYHRAWDTLYWTSSTTSSITRHTVDQTRPGAFDREAVIAMSEDDHP 2302
Query: 195 RGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
+ LD +FWT+W E +P I R + G N ++ST I PNGLT+D ++Y
Sbjct: 2303 HVLALDECQNL--MFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDHRAEKLY 2360
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
F+D L KI + DGS ++V
Sbjct: 2361 FSDGSLG----------------------------------KIERCEYDGSQRYVIVKSG 2386
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
L+L + + ++FW+DWG + G + + S + P G+
Sbjct: 2387 PGTFLSLAVYDN-----------YIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGI 2435
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ +V + + GL D +Y+ D L +IE C+ +G+ R V+ K G L
Sbjct: 2336 AQVVVSTDILTPNGLTIDHRAEKLYFSDGSLGKIERCEYDGSQRYVIVKSG----PGTFL 2391
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ ++FW+DWG + G + + S + P G+
Sbjct: 2392 SLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGI 2435
>gi|309269088|ref|XP_003084810.1| PREDICTED: low-density lipoprotein receptor-related protein 4-like
[Mus musculus]
Length = 976
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 185/379 (48%), Gaps = 69/379 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C++ + VCDG+ DC +G+DEG C + C GLC ++C+ +P G +C C PG L ++
Sbjct: 71 CLSFSMVCDGREDCVDGSDEGGECSSSVCSP--GLCYHSCYQSPTGPVCVCAPGFELESN 128
Query: 65 SVTCQDMNECEQPG--YCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
CQD+NEC+QP CSQ C NT+GSYIC+C+ GY+L D HTCKA + L++S
Sbjct: 129 GQICQDVNECQQPSGQPCSQTCINTEGSYICACHPGYLLGPDGHTCKATG-AEPILLVSI 187
Query: 123 RHSILVADLEEKGKD---------------------------------------HRAQDI 143
++ ++ L +D + I
Sbjct: 188 EFNLFLSGLRSLKEDILTTADKNLAIYSVDYDLVDQKIFWADPNAESIRWTSMATKKDGI 247
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-----IVLAKDNITQPRGMM 198
VV G+ + + DWIG ++YW D R +I R V+ D++ +P+ +
Sbjct: 248 VVQGIK-PDCIGVDWIGRNLYWTDGRAGQILAIQLTAMGRGKSEYTVVLDDDLIRPQSLA 306
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
LDP G ++W++ GE PRIE+ GMDGS+R +++ + P + LD + +++++D K
Sbjct: 307 LDPLNGL--MYWSETGEEPRIEQAGMDGSSRKILVNQGLGHPTSIALDQLSWKIFWSDEK 364
Query: 259 LDFIDCKSL-----------EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307
I +L +IK+ + + K++W D + M G + +
Sbjct: 365 FHCIGSVNLDGSGISMMQLTQIKSPFSVAVFEDKVFWSDLQTRTIQ---HAEKMTGKDRA 421
Query: 308 ILV--SGQLYEALALDLEN 324
+L+ SGQ + L + L+N
Sbjct: 422 VLIKRSGQPF-GLKIYLKN 439
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 90/191 (47%), Gaps = 25/191 (13%)
Query: 246 DIATRRVYFADSKLDFIDCKSLEIKTN-----------VNYSTIFRKLYWID-EGGNGVP 293
D+ +++++AD + I S+ K + + I R LYW D G +
Sbjct: 219 DLVDQKIFWADPNAESIRWTSMATKKDGIVVQGIKPDCIGVDWIGRNLYWTDGRAGQILA 278
Query: 294 LKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
+++ S ++++ L ++LALD NG++Y W++ GE PRIE+
Sbjct: 279 IQLTAMGRGKSEYTVVLDDDLIRPQSLALDPLNGLMY-----------WSETGEEPRIEQ 327
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
GMDGS+R +++ + P + LD + +++++D K I N DG+G + L +
Sbjct: 328 AGMDGSSRKILVNQGLGHPTSIALDQLSWKIFWSDEKFHCIGSVNLDGSGISMMQLTQIK 387
Query: 412 VEFTNDLMGDN 422
F+ + D
Sbjct: 388 SPFSVAVFEDK 398
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 111 INHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL 170
+ A +L N I + ++E G + I V G V A DW+ G+IYW+D+
Sbjct: 469 VQEKALYLSELNTSDIRLLRMKEPGILSWRRVISVKGT--VIDFALDWMSGNIYWIDTDN 526
Query: 171 NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF----WTDWGENPRIERIGMDG 226
I V NG IVL +N+ +P ++L P L D IE MDG
Sbjct: 527 PYINVAFSNGQYPIVLLSENLYRPTSIVLHPPTAAMCLADLGSQDDGRHGSSIECASMDG 586
Query: 227 SNRSTI-ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
S R + + +++ P GL + RVY+AD+ I L+
Sbjct: 587 SGRKVLWLQSQV--PVGLAFSDSGTRVYWADTGQGLIQSIQLD 627
>gi|395851057|ref|XP_003798083.1| PREDICTED: low-density lipoprotein receptor [Otolemur garnettii]
Length = 925
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 158/302 (52%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 362 ECITLDKVCNSVRDCRDWSDEPIKECGTNECLDNNGGCSHICNDLKIGYKCLCPDGFQLV 421
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC+ P CSQ+C N +GSY C C +G+ L+ CKA+ S A+L +N
Sbjct: 422 -DQRRCEDIDECQDPDTCSQICVNLEGSYKCECEDGFQLDPHTKACKAVG-SIAYLFFTN 479
Query: 123 RHSI-------------------LVA-------------DLEEK---------GKDHRAQ 141
RH + +VA DL ++ +
Sbjct: 480 RHEVRKMTLDRSEYTSLIPNLKNVVALDTEVASNRIYWSDLSQRKIYSTQIDGAHGFSSY 539
Query: 142 DIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D V+SG L +GLA DW+ G+IYW DS L + V D G R L K+ ++PR +++D
Sbjct: 540 DTVISGDLQAPDGLAVDWVHGNIYWTDSVLGTVSVADTKGMKRKTLFKEKGSKPRAIVVD 599
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL
Sbjct: 600 PVHG--FMYWTDWGTPAKIKKGGLNGVDVYSLVTEGIQWPNGITLDLSSGRLYWVDSKLH 657
Query: 261 FI 262
I
Sbjct: 658 SI 659
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLD 200
+V G+ G+ D G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 629 LVTEGIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNGGNRKTVLEDKKRLAHPFSLAIF 688
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 689 EDK----VFWTD 696
>gi|195479052|ref|XP_002100747.1| GE17236 [Drosophila yakuba]
gi|194188271|gb|EDX01855.1| GE17236 [Drosophila yakuba]
Length = 2009
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 167/379 (44%), Gaps = 88/379 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGA-LCTCPPGEILSN 63
CV+ +CDG +CP G DE +C C C T G C C G ++
Sbjct: 499 CVHQKHICDGHNECPAGEDEADCPKERKCSEP-SPCEQLCIETNAGLNECACRLGYVMDK 557
Query: 64 DSVTCQDMNECE--QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+ V C D++EC+ CSQ C NT GS+ CSC GY+L D +CKA+ + L+ +
Sbjct: 558 NKVNCTDIDECQYLTSPVCSQKCHNTMGSFKCSCETGYILRPDLRSCKALGGAMTLLVAN 617
Query: 122 -----------NRHSILVADLE---------EKG-----------------KDHRAQDIV 144
NR++ +V L KG R +D++
Sbjct: 618 RWDIRRVTLSNNRYTAIVKGLHNAIALDFHHRKGLMFWSDVSTDVIKMVYMNGTRVRDVI 677
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
GL+ G+A DWI ++W DS R+EV + G R V+A ++ +PR +++ PG
Sbjct: 678 KWGLESPGGIAVDWIHDLLFWTDSGTRRVEVSNFQGNLRTVIASYDLDKPRAIVV--HPG 735
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
FW+DWG NP+IER MDG+ R IIS + WPNGL +D ++Y+AD+K I+C
Sbjct: 736 EALAFWSDWGPNPKIERAYMDGTQRKVIISKGVTWPNGLAIDFPNSKLYWADAKQHAIEC 795
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
+N+DGS+ + ++S L AL L
Sbjct: 796 ----------------------------------SNLDGSDRNKILSTHLPHPFALTLFE 821
Query: 325 GMLYYSTLKCTRWLFWTDW 343
+Y WTDW
Sbjct: 822 DTMY-----------WTDW 829
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 141/356 (39%), Gaps = 91/356 (25%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA--------------------------- 110
G CS +C + S C C G L+ D TCK+
Sbjct: 882 GGCSHLCLPNQTSRRCGCPIGLSLKEDGKTCKSTADKLVLVARRKDIRLRHLRDNQADPN 941
Query: 111 ----------INHSAAFLIISNRHSILVADLEEK--GKDH----RAQDIVVSGLDLVEGL 154
+ H+ A S+ I D+E K H Q +V S L GL
Sbjct: 942 DVDMIVPLDNLKHAVALDWCSDTDFIYWTDVERSTINKAHLNGSYQQRVVHSNLVSPVGL 1001
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DWI +YW D NRIEV NG R +L + + +PR ++++P G ++FW+DWG
Sbjct: 1002 ALDWITDKLYWTDPSTNRIEVATTNGKMRTLLIWEKLYKPRDIVVNPIEG--FMFWSDWG 1059
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
++P IER MDG R TI S K+ +PNGL +D ++YF D K+LE
Sbjct: 1060 DDPMIERANMDGHERVTITSKKLIYPNGLAIDYEKSKIYFVDGGT-----KTLE------ 1108
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
N DGS ++++G L LD+ G
Sbjct: 1109 -----------------------NMNFDGSGRQVILNG-LGHPFGLDVNEGR-------- 1136
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 390
+FWTDW + + G + + II+ + RR++ A KL+
Sbjct: 1137 ---VFWTDWDTKSVMSANKLTGKDTNVIIANSTDLMDIRVFHRTRRRIFNACDKLN 1189
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 110/233 (47%), Gaps = 42/233 (18%)
Query: 71 MNECEQ-PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK-------------------- 109
N C++ G CS +C SY C+C G L+ D HTC
Sbjct: 1182 FNACDKLNGGCSHLCLLNPTSYTCACTVGVQLKEDRHTCSEGPTQYILFAHRIDIRQISL 1241
Query: 110 -------------AINHSAAFLIISNRHSILVAD------LEEKGKDHRAQDIVVSGLDL 150
I+++ A + I +D + Q IV L+
Sbjct: 1242 DFDHLIDVVLPLPPISNAVALDVDRKTGYIYWSDTIENVIMSSSPDGLHVQKIVGDSLEN 1301
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
+GL D IG IYW D+ + IEV +G+NR V+A ++ PRG+ LD G LFW
Sbjct: 1302 PDGLVVDSIGRTIYWADAGRHTIEVASLDGSNRHVIAYKDLESPRGLALDYEAGL--LFW 1359
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
TDWG +IER +DG+ RS I++ + WPNGL+LD+ ++R+Y+ D++L ID
Sbjct: 1360 TDWGHYRKIERSHLDGNERSRIVTANLGWPNGLSLDLKSKRIYWVDARLKTID 1412
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 172/449 (38%), Gaps = 110/449 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGP---GCDLAE--CKHK-----FGLCSNTCHPTPLGALC 53
RC+ T +CDG DC G DE CDL + C K +C + H +C
Sbjct: 453 RCILKTWLCDGYPDCAAGEDEVECHLQCDLGQFLCPTKQNLTNLKICVHQKH------IC 506
Query: 54 ----TCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-GSYICSCNEGYVLEYDNHTC 108
CP GE D C +C +P C Q+C T G C+C GYV++ + C
Sbjct: 507 DGHNECPAGE----DEADCPKERKCSEPSPCEQLCIETNAGLNECACRLGYVMDKNKVNC 562
Query: 109 ----------------KAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVE 152
K N +F IL DL R+ + + L+
Sbjct: 563 TDIDECQYLTSPVCSQKCHNTMGSFKCSCETGYILRPDL-------RSCKALGGAMTLLV 615
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
+D I + NR + N I L + +G+M FW+D
Sbjct: 616 ANRWD-----IRRVTLSNNRYTAIVKGLHNAIAL---DFHHRKGLM----------FWSD 657
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN 272
+ I+ + M+G+ +I + P G+ +D
Sbjct: 658 VSTDV-IKMVYMNGTRVRDVIKWGLESPGGIAVDW------------------------- 691
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
I L+W D G V + +N G+ +++ S L + A+ + G
Sbjct: 692 -----IHDLLFWTDSGTRRVEV----SNFQGNLRTVIASYDLDKPRAIVVHPGEAL---- 738
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
FW+DWG NP+IER MDG+ R IIS + WPNGL +D ++Y+AD+K I
Sbjct: 739 -----AFWSDWGPNPKIERAYMDGTQRKVIISKGVTWPNGLAIDFPNSKLYWADAKQHAI 793
Query: 393 DFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+ N DG+ R +++ L F L D
Sbjct: 794 ECSNLDGSDRNKILSTHLPHPFALTLFED 822
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 129/267 (48%), Gaps = 33/267 (12%)
Query: 41 SNTCHPTPLGALCTCPPGEILSNDSVT-CQDMNECEQPGYCSQMCTNTKGSYICSCNEGY 99
S+ C P G C CP G L +S T CQ++ E Y + G + S N G
Sbjct: 1499 SHLCLRNPSGYSCQCPIGLRLRQNSTTQCQNLPE----DYL--LIALRSGIGMISLNSGD 1552
Query: 100 VLEYDNHTCKAIN--HSAAFLIISNRHSILV-AD-----LEEKGKDHRAQDIVVSGLDLV 151
++ IN H A L R ++L AD + + + V+ G D++
Sbjct: 1553 FMD----VVLPINGVHGAVVLDYHYRKNLLFFADVNLDVIRRVNLLNLTESKVIVGTDVL 1608
Query: 152 --EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
G+A DWI ++YW D+ IEV +G+ R + +DN+ PR +++ P +LF
Sbjct: 1609 TPNGIAVDWIADNLYWSDTDRKLIEVSRLDGSCRKRIVEDNLGDPRSLIVHPKKA--YLF 1666
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI---DCKS 266
W+DW +IER +DGSNR+ II++ I +P GLT+D RR+ +AD+ D I D
Sbjct: 1667 WSDWSSPAKIERSYLDGSNRTVIITSGIGFPTGLTIDFINRRLLWADALEDNIGQVDFNG 1726
Query: 267 LEIKTNVNYS------TIFR-KLYWID 286
+T V Y+ T+F ++W D
Sbjct: 1727 KRRQTIVPYAPHPFGLTLFENSIFWTD 1753
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 29/181 (16%)
Query: 242 GLTLDIATRR--VYFADSKLDFIDCKSL----EIKTNVNYST----------IFRKLYWI 285
+ LD R+ ++FAD LD I +L E K V I LYW
Sbjct: 1566 AVVLDYHYRKNLLFFADVNLDVIRRVNLLNLTESKVIVGTDVLTPNGIAVDWIADNLYWS 1625
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
D + + + +DGS +V L + +L + Y LFW+DW
Sbjct: 1626 DTDRKLIEV----SRLDGSCRKRIVEDNLGDPRSLIVHPKKAY---------LFWSDWSS 1672
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+IER +DGSNR+ II++ I +P GLT+D RR+ +AD+ D I +++G RQ +
Sbjct: 1673 PAKIERSYLDGSNRTVIITSGIGFPTGLTIDFINRRLLWADALEDNIGQVDFNGKRRQTI 1732
Query: 406 I 406
+
Sbjct: 1733 V 1733
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 134/319 (42%), Gaps = 41/319 (12%)
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
H I L GLA D+ IY++D +E + +G+ R V+ + + P G
Sbjct: 1072 HERVTITSKKLIYPNGLAIDYEKSKIYFVDGGTKTLENMNFDGSGRQVIL-NGLGHPFG- 1129
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LD + G +FWTDW + + G + + II+ + RR++ A
Sbjct: 1130 -LDVNEGR--VFWTDWDTKSVMSANKLTGKDTNVIIANSTDLMDIRVFHRTRRRIFNACD 1186
Query: 258 KLDFIDCKSLEIKTNVNYS---TIFRKL----YWIDEG-------GNGVPLKIGKANMDG 303
KL+ C L + +Y+ T+ +L + EG + + ++ + D
Sbjct: 1187 KLNG-GCSHLCLLNPTSYTCACTVGVQLKEDRHTCSEGPTQYILFAHRIDIRQISLDFDH 1245
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+L + A+ALD++ + T +++W+D EN I DG + I+
Sbjct: 1246 LIDVVLPLPPISNAVALDVD---------RKTGYIYWSDTIENV-IMSSSPDGLHVQKIV 1295
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNG 423
+ P+GL +D R +Y+AD+ I+ + DG+ R + DL
Sbjct: 1296 GDSLENPDGLVVDSIGRTIYWADAGRHTIEVASLDGSNRHVIAYKDL-----------ES 1344
Query: 424 VPALALDLENGMLYYSTEG 442
LALD E G+L+++ G
Sbjct: 1345 PRGLALDYEAGLLFWTDWG 1363
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 119/283 (42%), Gaps = 36/283 (12%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
IV + L GL+ D IYW+D+RL I+ CD G R ++ ++ P + L
Sbjct: 1381 IVTANLGWPNGLSLDLKSKRIYWVDARLKTIDSCDYTGNQRKLIMS-SLHHPYALALSDD 1439
Query: 203 PGTRWLFWTDWGENP--RIERIGMDG-----SNRSTIISTKIYW--PNGLTLDIATRRVY 253
++WTDW ER + +N ++ KI + N T+
Sbjct: 1440 N----IYWTDWKSKALHMTERRNISAKRDIITNIDGLMDIKIIYQNQNQSTMKNVCGNNN 1495
Query: 254 FADSKL-----DFIDCK-SLEIKTNVNYSTIFRKL---YWIDEGGNGVPLKIGKANMDGS 304
S L C+ + ++ N +T + L Y + +G+ + I + D
Sbjct: 1496 GNCSHLCLRNPSGYSCQCPIGLRLRQNSTTQCQNLPEDYLLIALRSGIGM-ISLNSGDFM 1554
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG-MDGSNRSTII 363
+ + ++G ++ A+ LD Y L LF+ D + I R+ ++ + I+
Sbjct: 1555 DVVLPING-VHGAVVLDYH----YRKNL-----LFFADVNLDV-IRRVNLLNLTESKVIV 1603
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
T + PNG+ +D +Y++D+ I+ DG+ R++++
Sbjct: 1604 GTDVLTPNGIAVDWIADNLYWSDTDRKLIEVSRLDGSCRKRIV 1646
>gi|334326347|ref|XP_001364957.2| PREDICTED: low-density lipoprotein receptor [Monodelphis domestica]
Length = 860
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 157/302 (51%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+++ KVC+G DC + +DE C EC + G CS+ C+ +G C CP G L
Sbjct: 291 ECISMDKVCNGPRDCRDWSDEPIKECGTNECLNNKGGCSHICNDLKIGYECLCPEGFRLI 350
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC+ P CSQ C N GSY C C EGY ++ TCKAI + A+L +N
Sbjct: 351 -DQKRCEDIDECQNPDTCSQFCVNLPGSYKCECYEGYQIDPITKTCKAIG-TIAYLFFTN 408
Query: 123 RHSI-------------------LVA-------------DLEEK---------GKDHRAQ 141
RH + +VA DL +K
Sbjct: 409 RHEVRKMTLDRSEYISLIPNLKNVVALDMEVASNKIYWSDLSQKKIYSSEIDSAHSLSTH 468
Query: 142 DIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D V+SG + +G+A DWI G++YW DS L I V + G+ R L K +PR +++D
Sbjct: 469 DTVISGDIQAPDGIAVDWIHGNLYWTDSVLGTISVANTKGSKRKTLFKQEGAKPRAIVVD 528
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I + G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL
Sbjct: 529 PVHG--FMYWTDWGTPAKIGKGGLNGVDSFSLVTEAIEWPNGITLDLSSDRLYWVDSKLH 586
Query: 261 FI 262
I
Sbjct: 587 SI 588
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 170/417 (40%), Gaps = 73/417 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGC---DLAECKHKFGLCSNTCHPTPLGALCTCPPG-E 59
CV+ ++ C+ + DC + +DE GC L E +KF S C + +C P
Sbjct: 250 ECVHGSRQCNKEYDCKDMSDE-IGCVNVTLCEGPNKFKCHSGEC--ISMDKVCNGPRDCR 306
Query: 60 ILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL 118
S++ + NEC G CS +C + K Y C C EG+ L D C+ I+
Sbjct: 307 DWSDEPIKECGTNECLNNKGGCSHICNDLKIGYECLCPEGFRL-IDQKRCEDIDECQNPD 365
Query: 119 IISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDE 178
S L + + + D + + +AY +++ + R D
Sbjct: 366 TCSQFCVNLPGSYKCECYEGYQIDPITKTCKAIGTIAY------LFFTNRHEVRKMTLDR 419
Query: 179 NGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG----SNRSTIIS 234
+ ++ N+ + LD + ++W+D + +I +D S T+IS
Sbjct: 420 SEYISLIPNLKNV-----VALDMEVASNKIYWSDLSQK-KIYSSEIDSAHSLSTHDTVIS 473
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
I P+G+ +D I LYW D V
Sbjct: 474 GDIQAPDGIAVDW------------------------------IHGNLYWTD----SVLG 499
Query: 295 KIGKANMDGSNASILVS--GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
I AN GS L G A+ +D +G +Y WTDWG +I +
Sbjct: 500 TISVANTKGSKRKTLFKQEGAKPRAIVVDPVHGFMY-----------WTDWGTPAKIGKG 548
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL I + +G G ++++L D
Sbjct: 549 GLNGVDSFSLVTEAIEWPNGITLDLSSDRLYWVDSKLHSISSVDVNG-GNRRIVLED 604
>gi|326694427|gb|AEA03491.1| very low density lipoprotein receptor [Kryptolebias marmoratus]
Length = 565
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 148/298 (49%), Gaps = 44/298 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ ++KVC+ DCP+ +DE C+L EC G CS+ C +G C C PG L
Sbjct: 1 CIEMSKVCNKIRDCPDWSDEPLKECNLNECLLNNGGCSHICKDMVIGFECDCTPGLQLL- 59
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D TC D+NEC PG CSQ+C N KG Y C C+ GY ++ CKA+ + + R
Sbjct: 60 DHKTCGDINECMNPGICSQICINLKGGYKCECHNGYQMDPTTSVCKAVGKEPCLIFTNRR 119
Query: 124 -------------------------------HSILVADLEEKG--------KDHRAQDIV 144
++ ADL +K +D A V
Sbjct: 120 DVRRLGLERKEYTQMVEQQRNVVALDADFKQQTLFWADLGQKAIFSTVLDKRDAGAHKKV 179
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ V G+A DWI ++YW D I V + NGT + VL + +P + +DP G
Sbjct: 180 IDVQSPV-GVAVDWIYKNLYWSDLGTRTISVANFNGTKQKVLFSRGLKEPASIAVDPLSG 238
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+L+W+DWGE +IE+ GM+G +R +++T I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 239 --FLYWSDWGEPAKIEKSGMNGVDRQVLVATDIQWPNGITLDLIKGRLYWVDSKLHLL 294
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLAKDNITQPRGMM 198
Q +V + + G+ D I G +YW+DS+L+ + D NG NR ++ + D + P +
Sbjct: 262 QVLVATDIQWPNGITLDLIKGRLYWVDSKLHLLCSVDLNGDNRKKVLQSADVLAHPFALT 321
Query: 199 LDPSPGTRWLFWTDWGENPRI 219
+ +FWTD GEN I
Sbjct: 322 VFEDR----VFWTD-GENQAI 337
>gi|339253180|ref|XP_003371813.1| putative Low-density lipoprotein receptor domain class A [Trichinella
spiralis]
gi|316967876|gb|EFV52242.1| putative Low-density lipoprotein receptor domain class A [Trichinella
spiralis]
Length = 4465
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 188/414 (45%), Gaps = 91/414 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C++ + C+G+ DC + +DEG C++ EC +C + C +G C C G L+ D
Sbjct: 2760 CIDESLTCNGQNDCGDWSDEGHLCNVNECAFLVHMCEHVCVDKKIGYECACNSGFRLAED 2819
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSC-NEGYVLEYDNHTCKAINHSAAFLIISNR 123
+C D++EC + CSQ C N GS+ C C ++GYVL+ D TCK + A L++ +R
Sbjct: 2820 RTSCVDIDECTETYPCSQTCYNRFGSFSCECISDGYVLDADGVTCKHTDDIAPELLVCSR 2879
Query: 124 HSILVADLEEKGKDHRAQDIV------------------VSGLDLV-------------- 151
+I ++ + H ++ +S L +
Sbjct: 2880 STIKRYGMQGEVVGHVLINLTNAIAIDYDFEEDRVYWSDISQLSVYIGRVFLNGTGWQIL 2939
Query: 152 --------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN-ITQPRGMMLDPS 202
+GLA DW+ ++YW D + IEV +G R VL K + QPR +++DP
Sbjct: 2940 HRHDLRSPDGLAVDWVARNLYWCDKGTDTIEVSRLDGQYRKVLLKGKPLKQPRAIVVDPL 2999
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFW+DWG + I R+ +DGSN I++ + WPN LTLD +RV++ D+ L++
Sbjct: 3000 AG--YLFWSDWGLHAHIGRMDLDGSNVMLIVTDSLKWPNALTLDYVMKRVFWGDAGLNY- 3056
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
IG A+ DG+ +++ Q + A + L
Sbjct: 3057 ---------------------------------IGMASYDGNGVRKVITFQAFHAFGMYL 3083
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTL 375
LY WTDW E ++R+ G NRS +I Y P G+T+
Sbjct: 3084 FEDFLY-----------WTDW-ETGTVQRVQKHSGQNRSLVIPQLPYAPMGITV 3125
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 152/551 (27%), Positives = 226/551 (41%), Gaps = 138/551 (25%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ L K+C+ DC +G+DEG C +C H LC C+ +P G +C+C G L D
Sbjct: 1160 CLPLWKLCNRVDDCADGSDEGGMCSDKQCSHG-NLCDQLCYDSPYGFVCSCRDGYFLQPD 1218
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
TC + C Q G CSQ C + Y C C GYVL + +CK+ F++ S+RH
Sbjct: 1219 KKTCSPRDPCTQWGVCSQHCQSQGVHYYCYCEPGYVLSSNKFSCKSAQPDTPFVMFSSRH 1278
Query: 125 SILVADLEEKG---------------------------------------KDHRAQD--- 142
I + L + H +
Sbjct: 1279 EIRLIGLRRDAVAVSLVSNLRNSIAVDFYYNSTGSSSLIFWTDISTDRIYRGHMSSTELS 1338
Query: 143 --------IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
IV G+ EG+A DWIG ++YW+DS L++IEVC +GT R + +
Sbjct: 1339 STLDDVVAIVQHGVATAEGIAVDWIGQNLYWVDSTLDQIEVCKFDGTYRTAIVSGKMQSL 1398
Query: 195 RGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNR-STIISTKIY----WPNGLTLDIA 248
R + +DP G LFWTDW E NPRIER + G+ R ++S + W NGLT+D
Sbjct: 1399 RSLAVDPRKGL--LFWTDWEETNPRIERSTLAGTERVHNLLSVRSVKGGGWVNGLTIDYI 1456
Query: 249 TRRVYFADSKLDFIDCKSLE------IKTNVNYS------TIFRK-LYWID--------- 286
R+Y+ D+K D I + + + +N ++ T+F +YW D
Sbjct: 1457 AERLYWTDAKSDSIHTVNYDGQDHHLVLSNHDFMSHPFAITVFEDFVYWTDWRVNSVVRA 1516
Query: 287 -----------EGGNGVPLKI----------------GKANMDGSNASILVSGQ------ 313
+G NG P + G+ N S+ +LVS Q
Sbjct: 1517 NKWNGSSVQIIQGTNGQPFDLEILHPSRQPRKGKNPCGQNNGGCSHLCLLVSDQKAVCKC 1576
Query: 314 -LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI-ISTKIYWPN 371
+ LA D+ C + RI + D S ++ I I T + N
Sbjct: 1577 PYFYKLASDMRT---------CVDIGHAVIVAQPRRIVSMVGDMSEQNLIPIMTSVAVEN 1627
Query: 372 GLTLDI--ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALAL 429
+D+ TR++Y++DSK I +G+ VI DL N V LA+
Sbjct: 1628 VTAMDVDPITRQLYWSDSKSATIYRAFLNGSSSDAVINSDL-----------NNVFGLAI 1676
Query: 430 DLENGMLYYST 440
D + LY+S+
Sbjct: 1677 DWISRNLYFSS 1687
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 147/375 (39%), Gaps = 108/375 (28%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGC-------DLAECKHK--------------FGL 39
D C+ L K CD + DCP+G+DEGP C D + + K F
Sbjct: 288 TVDVCIELVKFCDDRLDCPDGSDEGPFCSGMMGWIDSFQLREKRKNDCALLILLFSAFAG 347
Query: 40 CSNTC----HPTPLGAL-CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICS 94
+ TC PTP G + C CPPG+ +C +P
Sbjct: 348 RNITCTYGQKPTPDGGMRCYCPPGKKPRR--------GQCIKPA---------------- 383
Query: 95 CNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK-------------DHRAQ 141
A ++I+N ++L+ DL K DHR +
Sbjct: 384 ------------------DEPATILITNGAAVLITDLNFNIKGTIEGRSLNPLDFDHRNR 425
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+ +A DWI G+ Y++D +R+ VC + L + +P+ + +DP
Sbjct: 426 TVC--------WIAKDWINGNWYFIDDTYDRLFVCTATLDRCVTLLSGTLDKPKDIAIDP 477
Query: 202 SPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
G ++F TDWG P + R+ MDGSN + + + +P+G+ LD AT VY+ D+ L
Sbjct: 478 REG--YIFITDWGSFQPSLVRVNMDGSNLTRFVDVSVIYPHGVVLDYATHSVYWLDNYLQ 535
Query: 261 FIDCKSLE-------------IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307
++ E +K+ + + + LY D N + ++I KA DGS
Sbjct: 536 YVRVVDYERTSRPRTVLSGMGVKSLHSLALFEKHLYATDYFKNMI-VRIAKA--DGSTVK 592
Query: 308 ILVSGQLYEALALDL 322
A ++ +
Sbjct: 593 SFARRDFTRAYSIKI 607
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 18/189 (9%)
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
++YW + L + RV+ + + L + + R LYW D+G + + +
Sbjct: 2913 RVYWSDISQLSVYIGRVFLNGTGWQILHRHDLRSPDGLAVDWVARNLYWCDKGTDTIEV- 2971
Query: 296 IGKANMDGSNASILVSGQLYE---ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+ +DG +L+ G+ + A+ +D G +LFW+DWG + I R+
Sbjct: 2972 ---SRLDGQYRKVLLKGKPLKQPRAIVVDPLAG-----------YLFWSDWGLHAHIGRM 3017
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+DGSN I++ + WPN LTLD +RV++ D+ L++I +YDG G ++VI
Sbjct: 3018 DLDGSNVMLIVTDSLKWPNALTLDYVMKRVFWGDAGLNYIGMASYDGNGVRKVITFQAFH 3077
Query: 413 EFTNDLMGD 421
F L D
Sbjct: 3078 AFGMYLFED 3086
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+++ GL G+A DW+ HIYW D I + +G+ I L + N+ P + + S
Sbjct: 3659 VLLQGLKRPVGIAVDWLHDHIYWSDLSAKLINIASLDGSVSIALVRKNLAMPYSLAI--S 3716
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
R LFWTD G+ RIE +DG+ R +++ +Y+P GL++D R+Y+AD K I
Sbjct: 3717 TTYRMLFWTDTGQRARIESAALDGTGRRILVADNLYYPTGLSVDEPNERLYWADPKTSSI 3776
Query: 263 DCKSLE 268
+ L+
Sbjct: 3777 ETAQLD 3782
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 165/420 (39%), Gaps = 94/420 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADE--GPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGE 59
+C+ + +CDG+ DC +G+DE GC C+ C N P C
Sbjct: 3446 QCIMQSLLCDGERDCDDGSDETAAAGCLPGFVTCRSTQFACKNGIQCIPKIWKCDGEADC 3505
Query: 60 ILSNDSVTCQDMNECEQPGYCSQMC---TNTKGSYICSCNEGYVLEYDN-HTCKAINHSA 115
+D + C+ + C G CSQ C N +G+ C C GY ++ +N + C+A
Sbjct: 3506 SDKSDEIGCE-TDRCSAFGLCSQKCELSKNGRGAK-CYCAAGYSVDGNNPNRCRADGSLP 3563
Query: 116 AFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGH---------IYWL 166
A L+++N + ++ K H D ++ V L Y + IYW
Sbjct: 3564 ALLVVANEE---IRSIDPYTKFH--YDRILMPNSRVTSLDYHIMPAEVDGTFSSVSIYWT 3618
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226
D+ NGT +++ I +P ++ + G+ NP +D
Sbjct: 3619 DAY---------NGT----VSRKKIIEPGRVVKREAFGSA-------AANP------LDS 3652
Query: 227 SNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
S+ + ++ + P G+ +D +Y++D I+ SL
Sbjct: 3653 SDTGAQVLLQGLKRPVGIAVDWLHDHIYWSDLSAKLINIASL------------------ 3694
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
DGS + LV L A+ L Y R LFWTD G+
Sbjct: 3695 ----------------DGSVSIALVRKNL--AMPYSLAISTTY-------RMLFWTDTGQ 3729
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
RIE +DG+ R +++ +Y+P GL++D R+Y+AD K I+ DG R V
Sbjct: 3730 RARIESAALDGTGRRILVADNLYYPTGLSVDEPNERLYWADPKTSSIETAQLDGRHRHLV 3789
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 22/164 (13%)
Query: 116 AFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEV 175
+ ++R++I +LE +D V + G++ DW+ G++YW D L I V
Sbjct: 727 VYFADASRYAIYRQNLETGDRDVLVDTFVGN----CAGMSIDWVAGNLYWTDDALATISV 782
Query: 176 --CDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE------------NPRIER 221
D+ R++L+ ++ PR + + P+ G LFW DW E IER
Sbjct: 783 LRVDQPACRRVLLSSGALSHPRAICVHPAMGL--LFWADWSEIVSAPGASVNRPAASIER 840
Query: 222 IGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDFID 263
MDG+ R ++ +++WPNGLTLD +Y+ D+ LD I+
Sbjct: 841 ANMDGTGRRPLVRGDHQLHWPNGLTLDYTHHWLYWCDAFLDRIE 884
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 80/194 (41%), Gaps = 38/194 (19%)
Query: 240 PNGLTLDIATRRVYFADSKLDFIDCKSLEIK-------------TNVNYSTIFRKLYWID 286
P +T D VYFAD+ I ++LE ++ + LYW D
Sbjct: 715 PTAITADAIRGDVYFADASRYAIYRQNLETGDRDVLVDTFVGNCAGMSIDWVAGNLYWTD 774
Query: 287 EGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE- 345
+ + + + + +L SG L A+ + M LFW DW E
Sbjct: 775 DAL--ATISVLRVDQPACRRVLLSSGALSHPRAICVHPAM---------GLLFWADWSEI 823
Query: 346 -----------NPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDFI 392
IER MDG+ R ++ +++WPNGLTLD +Y+ D+ LD I
Sbjct: 824 VSAPGASVNRPAASIERANMDGTGRRPLVRGDHQLHWPNGLTLDYTHHWLYWCDAFLDRI 883
Query: 393 DFCNYDGTGRQQVI 406
+ +DG+ RQ V+
Sbjct: 884 ERIRFDGSDRQLVL 897
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 10/147 (6%)
Query: 125 SILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL---DSRLNRIEVCDENGT 181
SI + ++ ++ +VS +EGLA+D + +YW ++ +NR+ V
Sbjct: 2163 SIFMVNITANASIDKSFVELVSDEGSIEGLAFDNLHQDLYWTSYTNATINRVHVGVHAAL 2222
Query: 182 NR----IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTK 236
R ++ +PRG+ +DP LFW +W P IE + G+ R II+T
Sbjct: 2223 PRRRTKVLQLNPMFDKPRGIAVDPC--EMRLFWANWNPLEPSIETSYLSGAVRRAIITTD 2280
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFID 263
I PN + +D + +Y++D++LD I+
Sbjct: 2281 IRTPNSIAIDFLVKELYWSDARLDKIE 2307
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 337 WLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
++F TDWG P + R+ MDGSN + + + +P+G+ LD AT VY+ D+ L ++
Sbjct: 481 YIFITDWGSFQPSLVRVNMDGSNLTRFVDVSVIYPHGVVLDYATHSVYWLDNYLQYVRVV 540
Query: 396 NYDGTGRQQVILIDLMVEFTNDL 418
+Y+ T R + +L + V+ + L
Sbjct: 541 DYERTSRPRTVLSGMGVKSLHSL 563
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 334 CTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
C LFW +W P IE + G+ R II+T I PN + +D + +Y++D++LD I
Sbjct: 2247 CEMRLFWANWNPLEPSIETSYLSGAVRRAIITTDIRTPNSIAIDFLVKELYWSDARLDKI 2306
Query: 393 DFCNYDGTGR 402
+ C YDG+GR
Sbjct: 2307 ERCRYDGSGR 2316
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 106/278 (38%), Gaps = 39/278 (14%)
Query: 59 EILSNDSVTCQDMNECEQP-GYCSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAINHSAA 116
EIL + N C Q G CS +C + +C C Y L D TC I H A
Sbjct: 1538 EILHPSRQPRKGKNPCGQNNGGCSHLCLLVSDQKAVCKCPYFYKLASDMRTCVDIGH-AV 1596
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
+ R +V D+ E+ + V V + D I +YW DS+ I
Sbjct: 1597 IVAQPRRIVSMVGDMSEQNLIPIMTSVAVEN---VTAMDVDPITRQLYWSDSKSATIYRA 1653
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW-GENPRIERIGMDGSNRSTIIST 235
NG++ + ++ G+ +D +R L+++ + ++ I +DG R +I +
Sbjct: 1654 FLNGSSSDAVINSDLNNVFGLAIDWI--SRNLYFSSYTDDHAEISITSLDGVFRRVLIQS 1711
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
P G+ I SL + + K+YWID G P
Sbjct: 1712 TRQSPGGVVKPI------------------SLAVHP------LLGKMYWIDVGLQ--PKA 1745
Query: 296 IGKANMDGSNASILVSGQLY----EALALDLENGMLYY 329
I A ++G + L Y L +DL+ +LY+
Sbjct: 1746 IQSAKLNGDSIQPLNIDPTYLGDPSYLRIDLQRNLLYW 1783
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 105/287 (36%), Gaps = 35/287 (12%)
Query: 93 CSCNEGYVLEYD---NHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLD 149
C C EGY L+++ C+ L + ++ + V G+
Sbjct: 654 CLCAEGYKLQWEAGLRGVCRLAFSYPTLLFGRTQPGAILGIPATTLAAGYSTVRPVRGIG 713
Query: 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
+ D I G +Y+ D+ I + +R VL + GM +D G L+
Sbjct: 714 RPTAITADAIRGDVYFADASRYAIYRQNLETGDRDVLVDTFVGNCAGMSIDWVAGN--LY 771
Query: 210 WTDWG-ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
WTD + R+ R + S + P + + A +++AD E
Sbjct: 772 WTDDALATISVLRVDQPACRRVLLSSGALSHPRAICVHPAMGLLFWADWS---------E 822
Query: 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLY 328
I + S N I +ANMDG+ LV G L NG+
Sbjct: 823 IVSAPGASV------------NRPAASIERANMDGTGRRPLVRGDH----QLHWPNGLTL 866
Query: 329 YSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
T WL+W D + RIERI DGS+R +++ P GL +
Sbjct: 867 DYT---HHWLYWCDAFLD-RIERIRFDGSDRQLVLTDAPTHPYGLAV 909
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ + + +A D++ +YW D+RL++IE C +G+ R+V+ + P G+ +
Sbjct: 2276 IITTDIRTPNSIAIDFLVKELYWSDARLDKIERCRYDGSGRVVVVVGKPSHPFGLAIYKD 2335
Query: 203 PGTRWLFWTDW 213
+L+WTDW
Sbjct: 2336 ----YLYWTDW 2342
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 95/239 (39%), Gaps = 17/239 (7%)
Query: 33 CKHKFGLCSNTCH-PTPLGALCTCPPGEILSNDSVTCQDMNEC---EQPGYCSQMCTNTK 88
C G CS+ C + A+C CP L++D TC D+ QP M +
Sbjct: 1553 CGQNNGGCSHLCLLVSDQKAVCKCPYFYKLASDMRTCVDIGHAVIVAQPRRIVSMVGDMS 1612
Query: 89 GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGL 148
+ +E N T ++ L S+ S + G A ++ S L
Sbjct: 1613 EQNLIPIMTSVAVE--NVTAMDVDPITRQLYWSDSKSATIYRAFLNGSSSDA--VINSDL 1668
Query: 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVC--DENGTNRIVLAKDNITQPRGMM----LDPS 202
+ V GLA DWI ++Y+ + E+ +G R VL + P G++ L
Sbjct: 1669 NNVFGLAIDWISRNLYFSSYTDDHAEISITSLDGVFRRVLIQSTRQSPGGVVKPISLAVH 1728
Query: 203 PGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYW--PNGLTLDIATRRVYFADSK 258
P ++W D G P+ I+ ++G + + Y P+ L +D+ +Y+ D K
Sbjct: 1729 PLLGKMYWIDVGLQPKAIQSAKLNGDSIQPLNIDPTYLGDPSYLRIDLQRNLLYWIDRK 1787
>gi|169646705|ref|NP_957217.2| very low-density lipoprotein receptor precursor [Danio rerio]
Length = 866
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 147/298 (49%), Gaps = 42/298 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ ++KVC+ DCP+ +DE C++ EC G CS+ C +G C C PG L
Sbjct: 326 ECIEMSKVCNKVRDCPDWSDEPIKECNMNECLINNGGCSHICRDLTIGFECDCTPGLQLI 385
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D+NEC PG CSQ+C N KG Y C C+ GY ++ CKA+ + +
Sbjct: 386 -DRKTCGDVNECLNPGICSQICINLKGGYKCECHNGYQMDPTTGVCKAVGKEPCLIFTNR 444
Query: 123 R-------------------------------HSILVADLEEKG-------KDHRAQDIV 144
R I ADL +K K + V
Sbjct: 445 RDIRKLGLERREYTQIVEQLRNTVALDADFIQQMIFWADLGQKAIFSTVLDKQDESHKKV 504
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ + + G+A DWI +IYW D I V + NGT + VL + +P + +DP G
Sbjct: 505 IDDVQMPVGIAVDWIYKNIYWSDLGSKSITVANFNGTKKKVLFNSGLKEPASIAVDPLSG 564
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+L+W+DWGE +IE+ GM+G++R ++ T I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 565 --FLYWSDWGEPAKIEKSGMNGNDRQVLVETDIQWPNGITLDLIKGRLYWVDSKLHML 620
>gi|195392954|ref|XP_002055119.1| GJ18973 [Drosophila virilis]
gi|194149629|gb|EDW65320.1| GJ18973 [Drosophila virilis]
Length = 1276
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/334 (32%), Positives = 165/334 (49%), Gaps = 56/334 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGA-LCTCPPGEILSN 63
CV+ VCDG+ DCP G DE C + + + C C + G C C G +++
Sbjct: 535 CVHQKHVCDGQNDCPLGEDE-VNCPVEQQCPEPRQCEQLCIKSARGRDECACRLGYLMNA 593
Query: 64 DSVTCQDMNECE--QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+ C D++EC+ CSQ C NT GS++CSC GY+L D TCKA+ A L+++
Sbjct: 594 NKRNCTDIDECQYLTSPVCSQKCHNTLGSFVCSCEMGYILRPDLRTCKALG-GAMTLLVA 652
Query: 122 NR--------------------HSILVADLE-EKG-----------------KDHRAQDI 143
NR H+ + D KG R +D+
Sbjct: 653 NRWDIRRVTLSNNRYMAIVKGLHNAIALDFHYRKGLMFWSDVSTDVIKMVYINGTRVRDV 712
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ GL+ G+A DW+ ++W DS R+EV + G R V+A ++ +PR +++ P
Sbjct: 713 IKWGLESPGGIAVDWVHDLLFWTDSGTRRVEVSNFQGNLRTVIASSDLDKPRAIVI--HP 770
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G FW+DWG NP+IER MDGS R IIS + WPNGL +D ++Y+AD+K I+
Sbjct: 771 GEALAFWSDWGPNPKIERAHMDGSQRQVIISKGVTWPNGLAIDYPNSKIYWADAKQHAIE 830
Query: 264 CKSLE-------IKTNVNYS---TIFR-KLYWID 286
C +L+ + T++ + TIF +YW D
Sbjct: 831 CSNLDGSERNKVLSTHLPHPFALTIFEDTMYWTD 864
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 149/364 (40%), Gaps = 71/364 (19%)
Query: 38 GLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC------EQPGYCSQMCTNTKGSY 91
G CS+ C P C CP G L +D TC+ + + Q+ + G
Sbjct: 918 GGCSHLCLPNKTSRRCGCPIGLSLKDDGKTCKSAPDKLVLVARRKDIRLRQLNSKPSGP- 976
Query: 92 ICSCNE-GYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG--KDH----RAQDIV 144
NE ++ DN + H+ A S I D+E K H Q +V
Sbjct: 977 ----NEVDMIVPLDN-----LKHAVALDWCSETDFIYWTDVERSSINKAHLNGSYQQRVV 1027
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
S L GLA DWI +YW D NRIEV NG R +L + + +PR ++++P G
Sbjct: 1028 HSNLVSPVGLALDWITDKLYWTDPSTNRIEVATTNGKMRTLLVWEKLDKPRDIVVNPIDG 1087
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
+FW+DWGE IER MDG++R I S K+ WPNGL +D ++YF D
Sbjct: 1088 L--MFWSDWGEEAMIERANMDGASRVIIASKKLIWPNGLAIDYDQHKLYFVDGGT----- 1140
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
K+LE N DGS+ ++++G L LD+
Sbjct: 1141 KTLE-----------------------------NMNFDGSSRKVIING-LGHPFGLDVSG 1170
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384
G +Y WTDW + M G + +T+I+ + RRVY
Sbjct: 1171 GRVY-----------WTDWDTKSAMSADKMTGKSVATVIANTSDLMDIRVFHRMRRRVYN 1219
Query: 385 ADSK 388
A K
Sbjct: 1220 ACDK 1223
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 137/345 (39%), Gaps = 94/345 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C K S C C G L+ D TCK+ ++++ R I + L K
Sbjct: 918 GGCSHLCLPNKTSRRCGCPIGLSLKDDGKTCKSA--PDKLVLVARRKDIRLRQLNSKPSG 975
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
D++V +L +A DW C E
Sbjct: 976 PNEVDMIVPLDNLKHAVALDW-----------------CSE------------------- 999
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
T +++WTD E I + ++GS + ++ + + P GL LD T
Sbjct: 1000 -------TDFIYWTDV-ERSSINKAHLNGSYQQRVVHSNLVSPVGLALDWITD------- 1044
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KLYW D N +I A +G ++LV +L +
Sbjct: 1045 -----------------------KLYWTDPSTN----RIEVATTNGKMRTLLVWEKLDKP 1077
Query: 318 --LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
+ ++ +G++ FW+DWGE IER MDG++R I S K+ WPNGL +
Sbjct: 1078 RDIVVNPIDGLM-----------FWSDWGEEAMIERANMDGASRVIIASKKLIWPNGLAI 1126
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMG 420
D ++YF D ++ N+DG+ R +VI+ L F D+ G
Sbjct: 1127 DYDQHKLYFVDGGTKTLENMNFDGSSR-KVIINGLGHPFGLDVSG 1170
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 18/194 (9%)
Query: 233 ISTKIYWPNGLTL--DIAT---RRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDE 287
I+ ++ GL D++T + VY +++ + LE + + L+W D
Sbjct: 678 IALDFHYRKGLMFWSDVSTDVIKMVYINGTRVRDVIKWGLESPGGIAVDWVHDLLFWTDS 737
Query: 288 GGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
G V + +N G+ +++ S L + A+ + G FW+DWG NP
Sbjct: 738 GTRRVEV----SNFQGNLRTVIASSDLDKPRAIVIHPGEAL---------AFWSDWGPNP 784
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+IER MDGS R IIS + WPNGL +D ++Y+AD+K I+ N DG+ R +V+
Sbjct: 785 KIERAHMDGSQRQVIISKGVTWPNGLAIDYPNSKIYWADAKQHAIECSNLDGSERNKVLS 844
Query: 408 IDLMVEFTNDLMGD 421
L F + D
Sbjct: 845 THLPHPFALTIFED 858
>gi|15425719|dbj|BAB64337.1| vitellogenin receptor [Anguilla japonica]
Length = 513
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 146/300 (48%), Gaps = 44/300 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ ++KVC+ DCP+ +DE C+L EC G CS+ C +G C C PG L
Sbjct: 39 ECIEMSKVCNKNRDCPDWSDEPLRECNLNECLLNNGGCSHICRDMVIGYECDCTPGLQLI 98
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D+NEC PG CSQ+C N KG Y C C+ GY ++ + CKA+ + +
Sbjct: 99 -DRKTCGDINECLNPGICSQICINLKGGYKCECHSGYQMDPTSGVCKAVGKEPCLIFTNR 157
Query: 123 R-------------------------------HSILVADLEEKG-----KDHR----AQD 142
R I ADL +K D R +
Sbjct: 158 RDIRKLGLERMEYTQIVEQLRNTVALDADFTQQRIFWADLGQKAIFSTVLDKRDEVNSHT 217
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
V+ + +A DWI +IYW D I V D +G+ R VL + +P + +DP
Sbjct: 218 KVIDNVQTPVAIAVDWIYKNIYWSDLGTKSITVADFSGSKRKVLFNSGLKEPASIAVDPL 277
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W+DWGE +IE+ GM+G +R +++T I WPNG TLD+ R+Y+ DSKL +
Sbjct: 278 SG--FLYWSDWGEPAKIEKSGMNGVDRQVLVATDIQWPNGFTLDLIKSRLYWVDSKLHML 335
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 34/206 (16%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST- 277
I ++G++ + I+ ++ L D +R+++AD I L+ + VN T
Sbjct: 160 IRKLGLERMEYTQIVE-QLRNTVALDADFTQQRIFWADLGQKAIFSTVLDKRDEVNSHTK 218
Query: 278 ---------------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALAL 320
I++ +YW D G + + A+ GS +L + L E ++A+
Sbjct: 219 VIDNVQTPVAIAVDWIYKNIYWSDLGTKSITV----ADFSGSKRKVLFNSGLKEPASIAV 274
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
D +G LY W+DWGE +IE+ GM+G +R +++T I WPNG TLD+
Sbjct: 275 DPLSGFLY-----------WSDWGEPAKIEKSGMNGVDRQVLVATDIQWPNGFTLDLIKS 323
Query: 381 RVYFADSKLDFIDFCNYDGTGRQQVI 406
R+Y+ DSKL + + +G R++V+
Sbjct: 324 RLYWVDSKLHMLCSVDLNGDNRRKVL 349
>gi|3021536|emb|CAA05874.1| somatic lipoprotein receptor [Oncorhynchus mykiss]
Length = 619
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 144/301 (47%), Gaps = 46/301 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ ++KVC+ DCP+ +DE C+L EC G CS+ C +G C C PG L
Sbjct: 66 ECIEMSKVCNKARDCPDWSDEPINECNLNECLLNNGGCSHICRDMVIGFECDCTPGLQLI 125
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D+NEC PG CSQ+C N KG Y C C+ Y ++ CKA+ LI +N
Sbjct: 126 -DRKTCGDINECMNPGICSQICINLKGGYKCECHNSYQMDPTTGVCKAVGKEPC-LIFTN 183
Query: 123 RHSILVADLEEKGKDHRAQDI--------------------------------------- 143
R I LE +G + +
Sbjct: 184 RRDIRKLGLERRGYTQIVEQLRNTVALDADFTQQTLFWADLSQRAIFSTVLDKRGDVGSH 243
Query: 144 --VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
V+ + G+A DWI +IYW D I V + GT R VL + +P + +DP
Sbjct: 244 VKVIDNVQTPVGIAVDWIYKNIYWSDLGTKTIAVANFIGTKRKVLFDSGLKEPASVAVDP 303
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+W+DWGE +IE+ GM+G +R ++ T I WPNG+TLD+ R+Y+ DSKL
Sbjct: 304 LSG--FLYWSDWGEPAKIEKSGMNGVDRQVLVETDIQWPNGITLDLIKSRLYWVDSKLHM 361
Query: 262 I 262
+
Sbjct: 362 L 362
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 72/131 (54%), Gaps = 17/131 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
I++ +YW D G I AN G+ +L L E ++A+D +G LY
Sbjct: 261 IYKNIYWSDLGTK----TIAVANFIGTKRKVLFDSGLKEPASVAVDPLSGFLY------- 309
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
W+DWGE +IE+ GM+G +R ++ T I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 310 ----WSDWGEPAKIEKSGMNGVDRQVLVETDIQWPNGITLDLIKSRLYWVDSKLHMLSSV 365
Query: 396 NYDGTGRQQVI 406
+ +G R++V+
Sbjct: 366 DLNGDNRRKVL 376
>gi|3021534|emb|CAA05873.1| vitellogenin receptor [Oncorhynchus mykiss]
Length = 584
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 144/301 (47%), Gaps = 46/301 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ ++KVC+ DCP+ +DE C+L EC G CS+ C +G C C PG L
Sbjct: 66 ECIEMSKVCNKARDCPDWSDEPINECNLNECLLNNGGCSHICRDMVIGFECDCTPGLQLI 125
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D+NEC PG CSQ+C N KG Y C C+ Y ++ CKA+ LI +N
Sbjct: 126 -DRKTCGDINECMNPGICSQICINLKGGYKCECHNSYQMDPTTGVCKAVGKEPC-LIFTN 183
Query: 123 RHSILVADLEEKGKDHRAQDI--------------------------------------- 143
R I LE +G + +
Sbjct: 184 RRDIRKLGLERRGYTQIVEQLRNTVALDADFTQQTLFWADLSQRAIFSTVLDKRGDVGSH 243
Query: 144 --VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
V+ + G+A DWI +IYW D I V + GT R VL + +P + +DP
Sbjct: 244 VKVIDNVQTPVGIAVDWIYKNIYWSDLGTKTIAVANFIGTKRKVLFDSGLKEPASVAVDP 303
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+W+DWGE +IE+ GM+G +R ++ T I WPNG+TLD+ R+Y+ DSKL
Sbjct: 304 LSG--FLYWSDWGEPAKIEKSGMNGVDRQVLVETDIQWPNGITLDLIKSRLYWVDSKLHM 361
Query: 262 I 262
+
Sbjct: 362 L 362
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 73/131 (55%), Gaps = 17/131 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
I++ +YW D G + + AN G+ +L L E ++A+D +G LY
Sbjct: 261 IYKNIYWSDLGTKTIAV----ANFIGTKRKVLFDSGLKEPASVAVDPLSGFLY------- 309
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
W+DWGE +IE+ GM+G +R ++ T I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 310 ----WSDWGEPAKIEKSGMNGVDRQVLVETDIQWPNGITLDLIKSRLYWVDSKLHMLSSV 365
Query: 396 NYDGTGRQQVI 406
+ +G R++V+
Sbjct: 366 DLNGDNRRKVL 376
>gi|377834386|ref|XP_003689479.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Mus musculus]
Length = 1974
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 180/370 (48%), Gaps = 68/370 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C++ + VCDG+ DC +G+DEG C + C GLC ++C+ +P G +C C PG L ++
Sbjct: 1002 CLSFSMVCDGREDCVDGSDEGGECSSSVCSP--GLCYHSCYQSPTGPVCVCAPGFELESN 1059
Query: 65 SVTCQDMNECEQPG--YCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
CQD+NEC+QP CSQ C NT+GSYIC+C+ GY+L D HTCKA + L++S
Sbjct: 1060 GQICQDVNECQQPSGQPCSQTCINTEGSYICACHPGYLLGPDGHTCKATG-AEPILLVSI 1118
Query: 123 RHSILVADLEEKGKD---------------------------------------HRAQDI 143
++ ++ L +D + I
Sbjct: 1119 EFNLFLSGLRSLKEDILTTADKNLAIYSVDYDLVDQKIFWADPNAESIRWTSMATKKDGI 1178
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-----IVLAKDNITQPRGMM 198
VV G+ + + DWIG ++YW D R +I R V+ D++ +P+ +
Sbjct: 1179 VVQGIK-PDCIGVDWIGRNLYWTDGRAGQILAIQLTAMGRGKSEYTVVLDDDLIRPQSLA 1237
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
LDP G ++W++ GE PRIE+ GMDGS+R +++ + P + LD + +++++D K
Sbjct: 1238 LDPLNGL--MYWSETGEEPRIEQAGMDGSSRKILVNQGLGHPTSIALDQLSWKIFWSDEK 1295
Query: 259 LDFIDCKSL-----------EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307
I +L +IK+ + + K++W D + M G + +
Sbjct: 1296 FHCIGSVNLDGSGISMMQLTQIKSPFSVAVFEDKVFWSDLQTRTIQ---HAEKMTGKDRA 1352
Query: 308 ILV--SGQLY 315
+L+ SGQ +
Sbjct: 1353 VLIKRSGQPF 1362
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 148/330 (44%), Gaps = 51/330 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C+ + +CDG+ DC +GADE C C G C C T G C+C PG L
Sbjct: 135 KCIPESLMCDGRADCTDGADEPRTCG-KNCSLLNGGCEGPCSNTHWGVRCSCTPGWQLQP 193
Query: 64 DSVTCQDMNECEQP-GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI--- 119
D +C D++EC P G C Q+C NT GSY C C +G+ L Y+ C+ + LI
Sbjct: 194 DGWSCGDVDECSLPYGPCGQLCHNTPGSYSCGCIQGHQL-YNGTDCRVTDDDVKILIATD 252
Query: 120 ------------------ISNRHSILVADLEEK--------------GKDHRAQDIVVSG 147
+ +R S + DL+ GK + +
Sbjct: 253 KELRILDRRTGSHEMLIPVKSRPSSVAYDLDRNMYFWVDKVLNVFVFGKPNSVH--LYPE 310
Query: 148 LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI-VLAKDNITQPRGMMLDPSPGTR 206
L V ++ DW+ G +YW S I +G + +L KD + P +++ P R
Sbjct: 311 LPPVSSISLDWVTGQLYWASSSGRVICAGLSDGRGYVKILEKDLV--PEELVV--FPAKR 366
Query: 207 WLFWTDWGEN--PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
+L+W D EN IE GMDGS+R + P GLTLD T R+Y+ + I+
Sbjct: 367 YLYWVDRSENGVKTIETAGMDGSDRKMLAVVTTEGPLGLTLDHVTGRLYWISGYKESIE- 425
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
++ + ++ Y+ F ++++ DE G+ +
Sbjct: 426 -TVNVDSSGRYT--FPRVFFEDEHPVGLAV 452
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 90/191 (47%), Gaps = 25/191 (13%)
Query: 246 DIATRRVYFADSKLDFIDCKSLEIKTN-----------VNYSTIFRKLYWID-EGGNGVP 293
D+ +++++AD + I S+ K + + I R LYW D G +
Sbjct: 1150 DLVDQKIFWADPNAESIRWTSMATKKDGIVVQGIKPDCIGVDWIGRNLYWTDGRAGQILA 1209
Query: 294 LKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
+++ S ++++ L ++LALD NG++Y W++ GE PRIE+
Sbjct: 1210 IQLTAMGRGKSEYTVVLDDDLIRPQSLALDPLNGLMY-----------WSETGEEPRIEQ 1258
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
GMDGS+R +++ + P + LD + +++++D K I N DG+G + L +
Sbjct: 1259 AGMDGSSRKILVNQGLGHPTSIALDQLSWKIFWSDEKFHCIGSVNLDGSGISMMQLTQIK 1318
Query: 412 VEFTNDLMGDN 422
F+ + D
Sbjct: 1319 SPFSVAVFEDK 1329
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 105/246 (42%), Gaps = 21/246 (8%)
Query: 40 CSNTCHPTPLG-ALCTCPPGEILSNDSVTCQDMNECE-----QPGYCSQM-CTNTKGSYI 92
CS+ C +P C CP G +L++D +TC + E P +Q+ N K S
Sbjct: 1384 CSHLCLLSPRAKGSCRCPVGLLLADDGITCVSLQESGFVFLVLPTVLTQIYLKNLKTSQQ 1443
Query: 93 CSCNEGYVLEYDNHTCKA-----INHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSG 147
+ E L + + A + A +L N I + ++E G + I V G
Sbjct: 1444 TTVPEHRTLPFTSVKQLASVDYLVQEKALYLSELNTSDIRLLRMKEPGILSWRRVISVKG 1503
Query: 148 LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V A DW+ G+IYW+D+ I V NG IVL +N+ +P ++L P
Sbjct: 1504 T--VIDFALDWMSGNIYWIDTDNPYINVAFSNGQYPIVLLSENLYRPTSIVLHPPTAAMC 1561
Query: 208 LF----WTDWGENPRIERIGMDGSNRSTI-ISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
L D IE MDGS R + + +++ P GL + RVY+AD+ I
Sbjct: 1562 LADLGSQDDGRHGSSIECASMDGSGRKVLWLQSQV--PVGLAFSDSGTRVYWADTGQGLI 1619
Query: 263 DCKSLE 268
L+
Sbjct: 1620 QSIQLD 1625
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 20/113 (17%)
Query: 310 VSGQLYEA------LALDLENGMLYYSTLK------------CTRWLFWTDWGEN--PRI 349
V+GQLY A + L +G Y L+ R+L+W D EN I
Sbjct: 322 VTGQLYWASSSGRVICAGLSDGRGYVKILEKDLVPEELVVFPAKRYLYWVDRSENGVKTI 381
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
E GMDGS+R + P GLTLD T R+Y+ + I+ N D +GR
Sbjct: 382 ETAGMDGSDRKMLAVVTTEGPLGLTLDHVTGRLYWISGYKESIETVNVDSSGR 434
>gi|387016734|gb|AFJ50486.1| Low-density lipoprotein receptor 1-like [Crotalus adamanteus]
Length = 862
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 150/298 (50%), Gaps = 47/298 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+++ KVC+G DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 290 ECISMDKVCNGLKDCRDWSDEPLKECRTNECLANKGGCSHICNDLKIGYECLCPEGFQLI 349
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC P CSQ+C N KGSY C C EGY ++ CKAI + A+L +N
Sbjct: 350 -DQRKCEDIDECLNPDACSQVCVNLKGSYKCECKEGYQIDPTTKACKAIG-TIAYLFFTN 407
Query: 123 RHSI------------LVADLEE-----------------------------KGKDHRAQ 141
RH + L+ L+E K +H
Sbjct: 408 RHEVRKMTLDRSEYTNLIPHLKEAMALDMEINNNKIYWSDSFHKKIYSTPIDKAGNHSHH 467
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
V+ SG+ + +GLA DW+ +IYW DS L I V G R L K+ +PR +++D
Sbjct: 468 TTVISSGIKVPDGLAVDWVHHNIYWTDSGLGTISVASSEGLKRKTLIKEVDAKPRAIVVD 527
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
P G +++WTDWG + +I + G++G + ++ I WPNG+ LD+ T R+Y+ DSK
Sbjct: 528 PVHG--FMYWTDWGMSAKIAKSGLNGVDSFPLVKEGIQWPNGIALDLITHRLYWVDSK 583
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 102/478 (21%), Positives = 180/478 (37%), Gaps = 97/478 (20%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGP--------------------GCDLAECKHKFGLCS 41
+ C+ VCD + DC +G+DE C C H+ C
Sbjct: 160 SSECIPKFWVCDNEADCKDGSDESAEFCGIQQGAKKTNPCSPLEFHCGSGVCIHQRWQCD 219
Query: 42 NT--CHPTPLGALC---TCPPGEILSNDSVTCQDMNECEQPGYCSQM--------CTNTK 88
+ C A C TC P E ND + +C Q C + T K
Sbjct: 220 GSFDCKDRSDEANCVKATCRPDEFQCNDGMCIHGSLQCNQEPDCKDLSDEVGCINVTTCK 279
Query: 89 GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK-DHRAQDIVV-- 145
GS + C+ G + D C + + + L KG H D+ +
Sbjct: 280 GSNVFKCSSGECISMDK-VCNGLKDCRDWSDEPLKECRTNECLANKGGCSHICNDLKIGY 338
Query: 146 -----SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
G L++ + I D LN + C + N K + G +D
Sbjct: 339 ECLCPEGFQLIDQRKCEDI-------DECLNP-DACSQVCVNLKGSYKCECKE--GYQID 388
Query: 201 PSP------GT-RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
P+ GT +LF+T+ E + ++ +D S + +I + L ++I ++Y
Sbjct: 389 PTTKACKAIGTIAYLFFTNRHE---VRKMTLDRSEYTNLIP-HLKEAMALDMEINNNKIY 444
Query: 254 FADSKLDFIDCKSLEIKTNVNYST-----------------IFRKLYWIDEGGNGVPLKI 296
++DS I ++ N ++ T + +YW D G + +
Sbjct: 445 WSDSFHKKIYSTPIDKAGNHSHHTTVISSGIKVPDGLAVDWVHHNIYWTDSGLGTISV-- 502
Query: 297 GKANMDGSNASILVS--GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
A+ +G L+ A+ +D +G +Y WTDWG + +I + G+
Sbjct: 503 --ASSEGLKRKTLIKEVDAKPRAIVVDPVHGFMY-----------WTDWGMSAKIAKSGL 549
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+G + ++ I WPNG+ LD+ T R+Y+ DSK + + +G R+ +++ + M+
Sbjct: 550 NGVDSFPLVKEGIQWPNGIALDLITHRLYWVDSKYHSVFSIDVNGENRRTILMDEEML 607
>gi|195478517|ref|XP_002100545.1| GE17125 [Drosophila yakuba]
gi|194188069|gb|EDX01653.1| GE17125 [Drosophila yakuba]
Length = 1964
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 150/307 (48%), Gaps = 51/307 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-DLAECKHKFGLCSNTCHP-TPLGALCTCPPGEILS 62
C+ L++VCDG +DC +G+DE C +C+ K CH + GA C CP G +
Sbjct: 267 CLVLSEVCDGHSDCSDGSDETEFCHSKPDCETKKCPLGAKCHMMSTSGAECICPKGFRQA 326
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA----AF 117
C+D++EC E+ CSQ C NT G Y C C+ GY+L+ DN TC+AI H +
Sbjct: 327 KFEDKCEDIDECKERDDLCSQGCENTSGGYQCVCDAGYLLDKDNRTCRAIVHGSIEQQPL 386
Query: 118 LIISNRHSILVADLEE------------------------------------------KG 135
L+ + + +I+ L E G
Sbjct: 387 LLYTTQMTIMGMHLREDNVRNHVYQVAGNLSKVIGVAYDGSHIYWTNIQNEAESIVKANG 446
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
A ++ SGLD E LA DW+ +IY+ D+ + I VC +G N VL ++ QPR
Sbjct: 447 DGSHADILLTSGLDAPEDLAVDWLTQNIYFSDNIMRHIAVCSHDGLNCAVLVTQDVHQPR 506
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ L P G +FWTDWGE P I R MDGS I+S I WPNG+ LD+ +R+Y+
Sbjct: 507 SLALWPQKG--LMFWTDWGEKPMIGRASMDGSRSRPIVSDNIEWPNGIALDMHQQRIYWV 564
Query: 256 DSKLDFI 262
D+KL +
Sbjct: 565 DAKLGSV 571
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 135/310 (43%), Gaps = 47/310 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFG--LCSNTCHPTPLGALCTCPPGEILS 62
CV+L++VC+ DC NG DEGP C A C+ G +C + C TP GA+C+C G L
Sbjct: 1338 CVDLSRVCNNFPDCANGHDEGPKCATA-CRSGSGRQVCQHKCRATPAGAVCSCFDGYRLD 1396
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS- 121
D +C D++EC++ C+Q+C NT G Y C C+ ++L D +CK++ A L S
Sbjct: 1397 ADQKSCSDIDECQEQQPCAQLCENTLGGYQCQCHADFMLRQDRVSCKSLQSGATLLFSSF 1456
Query: 122 ---------------------NRHSILVADLEEKGKDHRAQD--IVVS------------ 146
+R + D+ + A+D IV
Sbjct: 1457 NEVRNLSEQPVMLNVAWSANDSRITGFDVDMHRQMGYFSAEDEGIVYQVDLQTKLITRAL 1516
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPG 204
GL L+ DW+ G++Y L S I+ C G RIV K + + + +D G
Sbjct: 1517 GLPTPTKLSVDWVTGNVYVL-SGAQEIQACSFEGRMCGRIVHVK-SPKHVKHLAVDGYHG 1574
Query: 205 TRW---LFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
+ + +G+ + I +DGS R ++ + LT D + +YF D
Sbjct: 1575 RIFYIVIRTEGYGQTSSEIHMARLDGSRRDMLLQRGESFMTALTTDPHQQLLYFVDQHTR 1634
Query: 261 FIDCKSLEIK 270
++ S K
Sbjct: 1635 TLERISYRFK 1644
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 175/455 (38%), Gaps = 105/455 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAE--CKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + +CDG+ DC + +DE GC AE C + LC+N G L
Sbjct: 183 CIPIDFMCDGRVDCTDKSDEVAGCKQAEATCSVEGHLCAN---------------GRCLR 227
Query: 63 NDSVTCQDMNEC----EQPGYCSQMCTNTKGSYICSCNEGYVLEY---DNHT-------- 107
C +++C ++ G C +C KG ++C E ++ D H+
Sbjct: 228 RKQWVCDGVDDCGDGSDEKG-CLNLCEPQKGKFLCRNRETCLVLSEVCDGHSDCSDGSDE 286
Query: 108 --------------------CKAINHSAAFLIISNRHSILVADLEEKGKD----HRAQDI 143
C ++ S A I A E+K +D D+
Sbjct: 287 TEFCHSKPDCETKKCPLGAKCHMMSTSGAECICPK--GFRQAKFEDKCEDIDECKERDDL 344
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP--------- 194
G + G Y + Y LD +N T R ++ QP
Sbjct: 345 CSQGCENTSG-GYQCVCDAGYLLDK---------DNRTCRAIVHGSIEQQPLLLYTTQMT 394
Query: 195 -RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
GM L R + G ++ + DGS+ IYW N + +
Sbjct: 395 IMGMHLRED-NVRNHVYQVAGNLSKVIGVAYDGSH--------IYWTNIQNEAESIVKAN 445
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
S D + L+ ++ + + +Y+ D + I + DG N ++LV+
Sbjct: 446 GDGSHADILLTSGLDAPEDLAVDWLTQNIYFSDN----IMRHIAVCSHDGLNCAVLVTQD 501
Query: 314 LYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
+++ +L L + G+ +FWTDWGE P I R MDGS I+S I WPN
Sbjct: 502 VHQPRSLALWPQKGL-----------MFWTDWGEKPMIGRASMDGSRSRPIVSDNIEWPN 550
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
G+ LD+ +R+Y+ D+KL + DGTGR+ V+
Sbjct: 551 GIALDMHQQRIYWVDAKLGSVQTVRPDGTGRRTVL 585
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 10/108 (9%)
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
R++ IV ++ G+A D IYW+D++L ++ +GT R + + P G+
Sbjct: 537 RSRPIVSDNIEWPNGIALDMHQQRIYWVDAKLGSVQTVRPDGTGRRTVLDGMLKHPYGLA 596
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNR------STIISTKIYWP 240
+ L+W+DW G + TI + IY P
Sbjct: 597 IFED----QLYWSDWATKSVHACHKFSGKDHRILAKDRTIYAVHIYHP 640
>gi|383858341|ref|XP_003704660.1| PREDICTED: vitellogenin receptor-like [Megachile rotundata]
Length = 1745
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 166/341 (48%), Gaps = 57/341 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAE--CKHKFGLCSNTCHPTPLGALCTCPPGEI 60
RC+ L C+GK DC + +DE GC A+ CK C + C TP GA C+C G
Sbjct: 168 RCIFLNATCNGKDDCGDDSDENVEGCKKADASCKQS-AHCEHYCRKTPEGAQCSCKTGYK 226
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA--AFL 118
LS + TC D+NECE G C Q C N+ GSY CSC+ GY+L D TC A A F
Sbjct: 227 LSKNR-TCTDVNECEIFGICDQQCINSAGSYKCSCHSGYLLNDDGRTCYADGGEAVMVFS 285
Query: 119 IISN------------------RHSILV---------ADLE---------EKGKDHRAQD 142
I S +H++ V +D++ ++ HR +
Sbjct: 286 IKSEIRGLYLKSQLYYDVAQNLQHAVAVSVDADHVYWSDIQDGVEAITKSQEDGTHR-EV 344
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
IV +GL + +A DW+ G+IY+ DS I VC +G +L +D +PRG+ L PS
Sbjct: 345 IVTTGLKSPDDIAVDWVTGNIYFTDSGYMHIGVCSNDGNYCTILIRDRKEKPRGLALLPS 404
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G ++W++WG RI GMDG N S +I + WPN L++D A+ R+Y+ DSKL I
Sbjct: 405 NGI--MYWSEWGAKSRILMSGMDGKNSSALIVDSLEWPNSLSIDYASNRLYWVDSKLKII 462
Query: 263 DCKSLE-----------IKTNVNYSTIFRKLYWIDEGGNGV 292
+ L+ K + + KLYW D N +
Sbjct: 463 ESVGLDGSDRRIVLRGIAKRPFSLAVFEDKLYWSDWMSNTI 503
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 165/370 (44%), Gaps = 85/370 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ +KVCDG DC + +DE C +A K+ C N CH TPLG +C C G LS D
Sbjct: 1196 CLPFSKVCDGVADCLDRSDEFGQCSIACTKND--PCKNVCHKTPLGPVCGCGSGYQLSTD 1253
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS--- 121
+C+D+NECEQ CSQ+C NT GS++CSC E YVL D +CK + +S
Sbjct: 1254 LKSCEDINECEQ-NVCSQICHNTDGSFVCSCFEEYVLRNDRTSCKVGGQQMELITVSGSD 1312
Query: 122 ------NRHSILV----ADLEEKGKDHRAQD-----------------------IVVSGL 148
+ SI V D + G D A++ +V+GL
Sbjct: 1313 IRKLSADLRSIEVLYGNVDFDVSGIDVNARERNVYWSNDMFNTINKINLKSKERKIVTGL 1372
Query: 149 DLVEGLAYDWIGGHIYWLDS-RLNRIEVC--DENGTNRIVLAKDNITQPRGMMLDPSPGT 205
E LA DWI ++Y+ D+ L+ I+VC ++ ++V + ++ R M L P
Sbjct: 1373 GRPETLAVDWITDNVYFTDNDHLSSIKVCNLEQQKCAKVVSME---SRKRAMALAVHPIQ 1429
Query: 206 RWLFWT--DWG----ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
WLFW+ +W +I R GSN + I+S L +D R+Y+ D+ L
Sbjct: 1430 GWLFWSQVNWMLHDVPTSKIYRSTTVGSNATVIVSRNTGVVYALAIDYIRSRLYWTDTFL 1489
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ AN+DGSN +I + Y+AL+
Sbjct: 1490 KIIE----------------------------------SANLDGSNRAIFLKTDAYQALS 1515
Query: 320 LDLENGMLYY 329
+++ LY+
Sbjct: 1516 INIYEDALYW 1525
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 117/303 (38%), Gaps = 75/303 (24%)
Query: 80 CSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI------ISNRHSIL----- 127
CS++C N++ SY C+C L D+ TC+AI +I I H +L
Sbjct: 547 CSELCLLNSEKSYTCACAVDKELNTDHRTCRAIKKEMRLIISTGSRFIDYHHELLGKPKM 606
Query: 128 -----VADLEEKGKDHRAQDIVVS---------------GLD--------LVEGLAYDWI 159
+ D+ + R + S LD ++ G+ YD++
Sbjct: 607 KISDALKDVTAIAYNPRTGGMFASDQLKDKVFHFDINDGNLDAKVSLENKILGGMDYDYV 666
Query: 160 GGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRI 219
G ++Y+ D + IEV + + + +P + L P G ++ + D G+ RI
Sbjct: 667 GNNLYFSDIKQKTIEVHSMHTVQKTIFYFQE--EPHDIALAPEEGIMFVVFHDNGK-YRI 723
Query: 220 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIF 279
+ + M+G G+ + I R L K ++ Y
Sbjct: 724 DLLKMNGL--------------GIRISIEGMRTPL------------LGPKISLTYDRDL 757
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLF 339
+ L+W D+G +I ++G I SG L L+L + + ++++ K + L
Sbjct: 758 KLLFWSDQGTG----RISTTAVNGLETRIFRSG-LSAPLSLAILDDYVFWTEYK-SNQLH 811
Query: 340 WTD 342
WTD
Sbjct: 812 WTD 814
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 19/159 (11%)
Query: 287 EGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+GG V + K+ + G + + QLY +A +L++ + ++W+D +
Sbjct: 276 DGGEAVMVFSIKSEIRG----LYLKSQLYYDVAQNLQHAVAVSVD---ADHVYWSDIQDG 328
Query: 347 PR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
I + DG++R I++T + P+ + +D T +YF DS I C+ DG
Sbjct: 329 VEAITKSQEDGTHREVIVTTGLKSPDDIAVDWVTGNIYFTDSGYMHIGVCSNDGN--YCT 386
Query: 406 ILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAE 444
ILI E LAL NG++Y+S GA+
Sbjct: 387 ILIRDRKEKPR---------GLALLPSNGIMYWSEWGAK 416
>gi|344283309|ref|XP_003413414.1| PREDICTED: low-density lipoprotein receptor [Loxodonta africana]
Length = 901
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 157/302 (51%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 292 ECITLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSHVCNDLKIGYECLCPEGFRLV 351
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC+ P CSQ+C N +G Y C C++G+ ++ CKA+ + A+L +N
Sbjct: 352 -DQRRCEDIDECQDPDSCSQICVNLEGGYKCECHKGFQIDPHTKACKAVG-TIAYLFFTN 409
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L+ ++ +
Sbjct: 410 RHEVRKMTLDRSEYTSLITNLKNVVALDTEVASNRIYWSDLSQRKIYSTQIDRAHSFSSY 469
Query: 142 DIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D V+S L +GLA DW+ HIYW DS L + V D G R L K+ ++PR +++D
Sbjct: 470 DTVISKDLHAPDGLAVDWVHSHIYWTDSVLGTVSVADTRGVKRKTLFKEKDSKPRAIVVD 529
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL
Sbjct: 530 PAHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTEDIQWPNGITLDLSSGRLYWVDSKLH 587
Query: 261 FI 262
I
Sbjct: 588 SI 589
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLAKDNITQPRGMMLD 200
+V + G+ D G +YW+DS+L+ I D NG+NR ++ K+ + P + +
Sbjct: 559 LVTEDIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNGSNRKTVLEDKNRLAHPFSLAIF 618
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 619 EDK----VFWTD 626
>gi|195131081|ref|XP_002009979.1| GI14944 [Drosophila mojavensis]
gi|193908429|gb|EDW07296.1| GI14944 [Drosophila mojavensis]
Length = 2119
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 107/333 (32%), Positives = 161/333 (48%), Gaps = 54/333 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGA-LCTCPPGEILSN 63
CV+ VCDG+ DCP G DE C + + + C C T G C C G ++
Sbjct: 613 CVHQKHVCDGQNDCPLGEDE-VNCPVEQKCPEPQQCEQLCIKTARGRDECACRLGYLMHA 671
Query: 64 DSVTCQDMNECE--QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII- 120
+ C D++EC+ CSQ C NT GS++CSC GY+L D TCKA+ + L+
Sbjct: 672 NKRNCTDIDECQYLTSPVCSQKCHNTLGSFVCSCEMGYILRPDLRTCKALGGAMTLLVAN 731
Query: 121 ----------SNRHSILVADLEEKGK--------------------------DHRAQDIV 144
+NR+ +V L + + + I+
Sbjct: 732 RWDIRRVTLSNNRYMAIVKGLHNAIRLGPSFTGRVCVWSDVSTDVIKMVNINGTQVRSII 791
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
GL+ G+A DW+ ++W DS R+EV + G R V+A ++ +PR +++ PG
Sbjct: 792 KWGLESPGGIAVDWVHDLLFWTDSGTRRVEVSNFQGNLRTVIASSDLDKPRAIVI--HPG 849
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
FW+DWG NP+IER MDGS R IIS + WPNGL +D ++Y+AD+K I+C
Sbjct: 850 EALAFWSDWGPNPKIERAHMDGSQRQVIISKGVTWPNGLAIDYPNSKIYWADAKQHAIEC 909
Query: 265 KSLE-------IKTNVNYS---TIFR-KLYWID 286
+L+ + T++ + TIF +YW D
Sbjct: 910 SNLDGSERIKVLSTHLPHPFALTIFEDTMYWTD 942
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 146/360 (40%), Gaps = 69/360 (19%)
Query: 38 GLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC------EQPGYCSQMCTNTKGSY 91
G CS+ C P C CP G L +D TC+ + + Q+ T G
Sbjct: 996 GGCSHLCLPNKTSRRCGCPIGLSLKDDGKTCKSAPDKLVLVARRKDIRLRQLNTKPSGPN 1055
Query: 92 ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG--KDH----RAQDIVV 145
+ ++ DN + H+ A S I D+E K H Q +V
Sbjct: 1056 ----DVDMIVPLDN-----LKHAVALDWCSETDFIYWTDVERSSINKAHLNGSYQQRVVH 1106
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
S L GLA DWI +YW D NRIEV NG R +L + + +PR ++++P G
Sbjct: 1107 SNLVSPVGLALDWITDKLYWTDPSTNRIEVATTNGKMRTLLVWEKLDKPRDIVVNPIEGL 1166
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+FW+DWGE IER MDG++R I S K+ WPNGL +D ++YF D K
Sbjct: 1167 --MFWSDWGEEAMIERANMDGASRVIIASKKLIWPNGLAIDYDEHKLYFVDGGT-----K 1219
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
+LE N DGSN ++++G L LD+ G
Sbjct: 1220 TLE-----------------------------NMNFDGSNRKVIING-LGHPFGLDVSGG 1249
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
+Y WTDW + G + ST+I+ + RRVY A
Sbjct: 1250 RVY-----------WTDWDTKSAMSADKFTGKSVSTVIANTSDLMDIRVFHRTRRRVYNA 1298
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 105/232 (45%), Gaps = 42/232 (18%)
Query: 72 NECE-QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK--------------------- 109
N C+ Q G CS +C S+ C+C G L+ D TC
Sbjct: 1297 NACDKQNGGCSHLCLLNPTSFTCACAVGVQLKEDRRTCSEGPTKYILFAHRIDIRQISLD 1356
Query: 110 ------------AINHSAAFLIISNRHSILVAD------LEEKGKDHRAQDIVVSGLDLV 151
I+++ A + I +D + ++ L+
Sbjct: 1357 FDHLIDVVLPLPPISNAVALDVDQKTGYIFWSDTIENVIMSSSADGLHVHKVIGESLENP 1416
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
+GL D IG IYW D+ + IEV +G NR V+A ++ PRG+ LD G LFWT
Sbjct: 1417 DGLVVDSIGRMIYWADAGRHTIEVATLDGNNRHVIAYKDLESPRGLALDYEAGL--LFWT 1474
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
DWG +IER +DG+ RS I++ + WPNGL+LD+ ++R+Y+ D+ ID
Sbjct: 1475 DWGHYRKIERSHLDGNERSRIVTANLGWPNGLSLDLKSKRIYWVDALRKTID 1526
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 132/279 (47%), Gaps = 33/279 (11%)
Query: 30 LAE--CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNT 87
LAE C G CS+ C P G C CP G L +S T EC+ +
Sbjct: 1598 LAENVCGRNNGGCSHLCLRNPAGYSCQCPTGLKLRENSTT-----ECQNLPDDYLLIALR 1652
Query: 88 KGSYICSCNEGYVLEYDNHTCKAIN--HSAAFLIISNRHS-ILVAD-----LEEKGKDHR 139
G + S N G ++ IN H A L R + + AD + +
Sbjct: 1653 SGIGMISLNSGDYMD----VVLPINGVHGAVVLDYHYRSNWLFFADVNMDVIRRVNLLNL 1708
Query: 140 AQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+ VV DL+ G+A DWI ++YW D+ IEV +G++R L +++ PR +
Sbjct: 1709 TESKVVVSTDLLTPNGIAVDWIADNLYWSDTDRKLIEVSRLDGSSRKKLISEDLGDPRSL 1768
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++ PS +LFW+DW +IER +DGSNR+ I+++ I +P GLT+D + RR+ +AD+
Sbjct: 1769 IVHPSKA--FLFWSDWNSPSKIERSLLDGSNRTAIVTSGIGFPTGLTIDFSNRRLLWADA 1826
Query: 258 KLDFI---DCKSLEIKTNVNYS------TIFR-KLYWID 286
D I D +T V Y+ T+F +YW D
Sbjct: 1827 LEDNIGQVDFNGKRRQTIVPYAPHPFGLTMFENNIYWTD 1865
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 136/345 (39%), Gaps = 94/345 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C K S C C G L+ D TCK+ ++++ R I + L K
Sbjct: 996 GGCSHLCLPNKTSRRCGCPIGLSLKDDGKTCKSA--PDKLVLVARRKDIRLRQLNTKPSG 1053
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
D++V +L +A DW C E
Sbjct: 1054 PNDVDMIVPLDNLKHAVALDW-----------------CSE------------------- 1077
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
T +++WTD E I + ++GS + ++ + + P GL LD T
Sbjct: 1078 -------TDFIYWTDV-ERSSINKAHLNGSYQQRVVHSNLVSPVGLALDWITD------- 1122
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KLYW D N +I A +G ++LV +L +
Sbjct: 1123 -----------------------KLYWTDPSTN----RIEVATTNGKMRTLLVWEKLDKP 1155
Query: 318 --LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
+ ++ G++ FW+DWGE IER MDG++R I S K+ WPNGL +
Sbjct: 1156 RDIVVNPIEGLM-----------FWSDWGEEAMIERANMDGASRVIIASKKLIWPNGLAI 1204
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMG 420
D ++YF D ++ N+DG+ R +VI+ L F D+ G
Sbjct: 1205 DYDEHKLYFVDGGTKTLENMNFDGSNR-KVIINGLGHPFGLDVSG 1248
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 135/330 (40%), Gaps = 93/330 (28%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C Y C C G L +N T + N +L+I+ R
Sbjct: 1608 GGCSHLCLRNPAGYSCQCPTGLKLR-ENSTTECQNLPDDYLLIALR-------------- 1652
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
SG+ ++ + D++ +VL + + +
Sbjct: 1653 --------SGIGMISLNSGDYMD-----------------------VVLPINGVHG--AV 1679
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGM-DGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+LD + WLF+ D + I R+ + + + ++ST + PNG+ +D +Y++D
Sbjct: 1680 VLDYHYRSNWLFFADVNMDV-IRRVNLLNLTESKVVVSTDLLTPNGIAVDWIADNLYWSD 1738
Query: 257 SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE 316
+ RKL I + +DGS+ L+S L +
Sbjct: 1739 TD---------------------RKL-------------IEVSRLDGSSRKKLISEDLGD 1764
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 376
+L + + LFW+DW +IER +DGSNR+ I+++ I +P GLT+D
Sbjct: 1765 PRSLIVHPSKAF---------LFWSDWNSPSKIERSLLDGSNRTAIVTSGIGFPTGLTID 1815
Query: 377 IATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ RR+ +AD+ D I +++G RQ ++
Sbjct: 1816 FSNRRLLWADALEDNIGQVDFNGKRRQTIV 1845
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 135/340 (39%), Gaps = 60/340 (17%)
Query: 121 SNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD-SRLNRIEVCDEN 179
+ RH+I VA L+ + I L+ GLA D+ G ++W D +IE +
Sbjct: 1433 AGRHTIEVATLDGNNR----HVIAYKDLESPRGLALDYEAGLLFWTDWGHYRKIERSHLD 1488
Query: 180 GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYW 239
G R + N+ P G+ LD ++ ++W D I+ G+ R I+S ++
Sbjct: 1489 GNERSRIVTANLGWPNGLSLDLK--SKRIYWVD-ALRKTIDSCDYTGNQRKLIMSA-LHH 1544
Query: 240 PNGLTL--------DIATRRVYFADSK--------LDFIDCKSLEIKTNVNYSTIFRKLY 283
P L L D ++ ++ AD + + ID ++IK + + +
Sbjct: 1545 PYALALSDDHIYWTDWKSKALHMADRRQTSNKRDVMTNID-GLMDIKVIIKQPQLAENVC 1603
Query: 284 WIDEGG-----------------NGVPLKIGK--------------ANMDGSNASILVSG 312
+ GG G+ L+ A G L SG
Sbjct: 1604 GRNNGGCSHLCLRNPAGYSCQCPTGLKLRENSTTECQNLPDDYLLIALRSGIGMISLNSG 1663
Query: 313 QLYEA-LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM-DGSNRSTIISTKIYWP 370
+ L ++ +G + + WLF+ D + I R+ + + + ++ST + P
Sbjct: 1664 DYMDVVLPINGVHGAVVLDYHYRSNWLFFADVNMDV-IRRVNLLNLTESKVVVSTDLLTP 1722
Query: 371 NGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
NG+ +D +Y++D+ I+ DG+ R+++I DL
Sbjct: 1723 NGIAVDWIADNLYWSDTDRKLIEVSRLDGSSRKKLISEDL 1762
>gi|194863549|ref|XP_001970495.1| GG23343 [Drosophila erecta]
gi|190662362|gb|EDV59554.1| GG23343 [Drosophila erecta]
Length = 4647
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 119/369 (32%), Positives = 173/369 (46%), Gaps = 67/369 (18%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
+ +CV + ++CDGK DC + DEG C C + CS+ CH TP G +C+CP L
Sbjct: 1152 SKQCVTVDQLCDGKNDCEDTTDEGFLCADKLCD-RGHECSHRCHNTPEGYICSCPDHLYL 1210
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+ C + C+ CSQ+C ++ Y C C +G+ L +D TCK+ ++I +
Sbjct: 1211 QPNGKRCSMQHACDHWDTCSQVCESSGKGYDCRCLDGFDLGFDRFTCKSTAPDEPYVIFT 1270
Query: 122 NRHSILVADLEE----------------------------------KGKDHRAQ------ 141
NR I +L+ K +R Q
Sbjct: 1271 NRQDIKGINLKTLNAGSFYSSLRNIIALDFLYNNESNVEIYWTDVIDDKIYRGQLVGESL 1330
Query: 142 ----DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
++ SGL EGLA DW+G ++YW+DS L++IEV NG+ R L N+ PR +
Sbjct: 1331 RNVEAVIHSGLSTTEGLAVDWVGKNLYWIDSNLDQIEVAKLNGSFRRTLIAGNMESPRAI 1390
Query: 198 MLDPSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIST---KIYWPNGLTLDIATRRVY 253
LDP G LFWTDW +N PRIER M G R I ++ WPNGLTLD +RVY
Sbjct: 1391 ALDPREGL--LFWTDWDDNSPRIERASMSGDGRRLISTSWQLSAGWPNGLTLDYTQKRVY 1448
Query: 254 FADSKLDFIDC------------KSLEIKTNVNYSTIFRK-LYWIDEGGNGVPLKIGKAN 300
+ D+K D I ++ EI ++ ++F +YW D V ++ K N
Sbjct: 1449 WVDAKSDSISSTMYDGSEHHVVLRNKEILSHPFAISVFENYVYWTDWRATSV-IRANKWN 1507
Query: 301 MDGSNASIL 309
GS+ +L
Sbjct: 1508 --GSDVQVL 1514
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 154/304 (50%), Gaps = 45/304 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EILSN 63
C++ +CD + DC + +DE C++ EC +C + C +G C C PG ++L+
Sbjct: 2934 CIHADLLCDRRNDCADFSDE-ELCNVNECLIP-DICEHECEDKVIGYQCHCRPGYKVLAR 2991
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
C D++EC++ CSQ C NT GSY C C +GY L D HTCKA ++ + LI SNR
Sbjct: 2992 SPHLCTDIDECDEQQPCSQTCVNTYGSYKCLCAKGYAL-VDQHTCKATSNVSMELIFSNR 3050
Query: 124 HSILVADLEEKG---------------------------------------KDHRAQDIV 144
+ I D+ G K+++ Q +
Sbjct: 3051 YYIRQVDMTGNGSILINELSNAVALDYDWDSQCLYWSDVTSTVGTIKRHCPKENKTQTLH 3110
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ L +GLA DW+ ++YW D L+ IEV +G R VL + + +PRG+ L P
Sbjct: 3111 QAMLKNPDGLAVDWVAKNLYWCDKGLDTIEVSQLDGKYRKVLINEYLREPRGIALHPY-- 3168
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
R +FW+DWG++P I + GMDGSN II + WPN LT+ T+++++ D++ D I
Sbjct: 3169 QRHIFWSDWGDSPHIGKAGMDGSNPKMIIRDGLGWPNALTISFETQQLFWGDAREDTISV 3228
Query: 265 KSLE 268
L+
Sbjct: 3229 SDLD 3232
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 170/452 (37%), Gaps = 93/452 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ + CDGK DC +G+DE + C H G GA C ++L +
Sbjct: 2891 CIFKNQTCDGKPDCADGSDEAS----SLCAHTRGCNGTDDFRCKNGA---CIHADLLCDR 2943
Query: 65 SVTCQD--------MNECEQPGYCSQMCTNTKGSYICSCNEGY-VLEYDNHTCKAINH-- 113
C D +NEC P C C + Y C C GY VL H C I+
Sbjct: 2944 RNDCADFSDEELCNVNECLIPDICEHECEDKVIGYQCHCRPGYKVLARSPHLCTDIDECD 3003
Query: 114 -----SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS 168
S + + L A H + ++L+ Y
Sbjct: 3004 EQQPCSQTCVNTYGSYKCLCAKGYALVDQHTCKATSNVSMELIFSNRY------------ 3051
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP-RIERIGMDGS 227
I D G I++ + + LD ++ L+W+D I+R +
Sbjct: 3052 ---YIRQVDMTGNGSILINE----LSNAVALDYDWDSQCLYWSDVTSTVGTIKRHCPKEN 3104
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDE 287
T+ + P+GL +D + + LYW D+
Sbjct: 3105 KTQTLHQAMLKNPDGLAVDW------------------------------VAKNLYWCDK 3134
Query: 288 GGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
G + + + + +DG +L++ L E + L R +FW+DWG++P
Sbjct: 3135 GLDTIEV----SQLDGKYRKVLINEYLREPRGIALHPYQ---------RHIFWSDWGDSP 3181
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
I + GMDGSN II + WPN LT+ T+++++ D++ D I + DG +
Sbjct: 3182 HIGKAGMDGSNPKMIIRDGLGWPNALTISFETQQLFWGDAREDTISVSDLDGNHTRL--- 3238
Query: 408 IDLMVEFTNDLMGDNGVPALALDLENGMLYYS 439
L+ N L+ + + A+A + G +Y+S
Sbjct: 3239 --LLARIINPLLNLHHIFAIA--VWEGRIYWS 3266
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 92/215 (42%), Gaps = 58/215 (26%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI---------EVCDENGTN-RIVLAKD 189
Q +++ VEGLAYD + ++W + I E D+N + + VL+
Sbjct: 2271 GQRVLLEQQQRVEGLAYDIVNEQLFWTSNNNATIRSVELRHLSEHADQNQVHVKKVLSLR 2330
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248
+PRG+ ++P G ++WT+W E +P I+R + G II T I PN LTLD+
Sbjct: 2331 ENDKPRGIAVEPCLGM--IYWTNWNEGSPCIQRSYLTGYGTEVIIKTDIKMPNALTLDLE 2388
Query: 249 TRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
+++Y+AD++LD KI + N DGSN +
Sbjct: 2389 QQKLYWADARLD----------------------------------KIERTNYDGSNRVV 2414
Query: 309 LVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L A A M Y L LFWTDW
Sbjct: 2415 LAHSTPKHAFA------MAVYGDL-----LFWTDW 2438
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL-SN 63
C+ L++ CDG DC N + CD CS C TP GA C CP ++ S+
Sbjct: 84 CLELSRFCDGHWDCDNDELQ---CDKQNAACAALNCSFNCKLTPQGARCYCPKDQVPESS 140
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN 112
+S C D +EC +PG C Q+C NT GSY CSC GY + C+AIN
Sbjct: 141 NSTRCVDYDECSEPGTCDQVCRNTPGSYECSCVSGYA-KTKGSRCRAIN 188
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 120/327 (36%), Gaps = 83/327 (25%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG--CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + +CDG DC DE L +C+H C N C
Sbjct: 3725 CIRNSALCDGVNDCGENEDESDAVCAALPKCRHDQFQCEND----------DCISKAFRC 3774
Query: 63 NDSVTCQDMNE---CEQP----GYCSQMCTNTK-GSYICSCNEGYVL-EYDNHTCKAINH 113
+ C D ++ C+ P G CSQ+C K G Y C C +GY N TC A
Sbjct: 3775 DGQYNCVDGSDEMNCQPPVCGFGSCSQICIEKKAGHYNCKCADGYHKGPEKNATCLASGP 3834
Query: 114 SAAFLIISNR-------------------------------------------------- 123
L+ S +
Sbjct: 3835 DQILLLASEQEFRFILPAKQEGTTVVGFFQTDSLKIDVFDILIRPKDTLLFWIDSHHGKV 3894
Query: 124 HSILVADLEEKGKDHRAQDIV-------VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
H++ +A +G R + + + LD + LA DWI +Y +DSR N+I
Sbjct: 3895 HTMKIATPHVEGTGVRVRRDLKELTAFNIPELDDPKSLAVDWISQRVYIIDSRHNQILAT 3954
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 236
D G I L + P ++L+P +R + W+ I +DGSN+ +++
Sbjct: 3955 DIEGKKYISLVSTGMN-PTDIVLEPE--SRIMIWSTLENG--ILVASLDGSNKKSLVERD 4009
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFID 263
+ WP L++D T R+Y+AD + I+
Sbjct: 4010 VGWPISLSMDYPTGRLYWADYRKGTIE 4036
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 146/352 (41%), Gaps = 70/352 (19%)
Query: 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
D + G+A DW+ +IYW D++ N IEV +G++R V+ N+ +P + +DP G L
Sbjct: 1973 DWLGGIAIDWVAENIYWSDTKRNIIEVARLDGSHRYVVVS-NLEKPTVLAVDPLQGL--L 2029
Query: 209 FWTDWGENPRIERIGMDGSNRSTIIS-TKIYWPNG-LTLDIATRRVYFADSKLDFI---- 262
F+ I R+G+DGS +++ T+ W G L LDI +VY+ + D I
Sbjct: 2030 FYV---TQQHIGRVGLDGSQPFVLVNQTRANWAVGSLVLDIEATKVYWCERYPDAIMKVD 2086
Query: 263 ---DCKSLEIKTNVNYSTIFRK----LYWIDEGGNGVPLKIGK-ANMDGSNASILVSGQL 314
+ + + ++N K LYW + N +++ AN+ S +
Sbjct: 2087 YDGNLREQLLNESLNNPVALAKMGDYLYWAENKYNEGIIRVAPLANLSQSKVVLQTEQDA 2146
Query: 315 YEALAL---DLENGM--LYYSTLKCTRWLFW--TDWGENPRIERIGMDGSN--------- 358
L + L+ G +S C + + T R+ DG++
Sbjct: 2147 IRDLKIYSKHLQRGSNPCAHSNGGCDQLCLFNGTSAVCACAHSRLASDGTSCEPYENFLL 2206
Query: 359 ---RSTIISTKIY------WPN-------------GLTLDIATRRVYFADSKLDFIDFCN 396
RS I S + WP +T + + VY++D +L I+ +
Sbjct: 2207 FSYRSNIESIHMTDHADKNWPVQMISNSSLMRNVIAITYNYEEQLVYYSDVQLSTINQVH 2266
Query: 397 YDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKT 448
++GTG++ ++ VE LA D+ N L++++ +++
Sbjct: 2267 FNGTGQRVLLEQQQRVE------------GLAYDIVNEQLFWTSNNNATIRS 2306
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 22/177 (12%)
Query: 242 GLTLDIATRRVYFADSKLDFIDCKS---------LEIKTNVN---YSTIFRKLYWIDEGG 289
+T + + VY++D +L I+ LE + V Y + +L+W
Sbjct: 2242 AITYNYEEQLVYYSDVQLSTINQVHFNGTGQRVLLEQQQRVEGLAYDIVNEQLFWTSNNN 2301
Query: 290 ---NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE- 345
V L+ + D + + + L+L + + C ++WT+W E
Sbjct: 2302 ATIRSVELRHLSEHADQNQVHV------KKVLSLRENDKPRGIAVEPCLGMIYWTNWNEG 2355
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
+P I+R + G II T I PN LTLD+ +++Y+AD++LD I+ NYDG+ R
Sbjct: 2356 SPCIQRSYLTGYGTEVIIKTDIKMPNALTLDLEQQKLYWADARLDKIERTNYDGSNR 2412
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNITQPRGMMLDPSP 203
VS L DW+ G+ Y + +C T R++L + + + LDP+
Sbjct: 291 VSPQQFFSELRLDWLSGNWYLFSEDDGLVYLCTNAMTYCRVILQQ--VDPLSSLALDPTK 348
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G ++F+TDW P + R +DG+NR+ +++ ++Y P+ +TLD+A VY+ D D ++
Sbjct: 349 G--FMFYTDW--KPSLSRSLLDGTNRTVLVTDQVYHPSSVTLDLANELVYWIDIYKDEVN 404
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
E + N T+ R L + VPLK A N+ L + +ALD
Sbjct: 405 RVDYEGR---NRWTLKRPL------DSPVPLKTIHAVEVFENSIYLAAWMDTAIVALD 453
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 60/221 (27%)
Query: 213 WGENP--RIERIGMDGSNRSTIIST-------KIYWPNGLTLDIATRRVYFADSKLDFID 263
WG+N I R+ DG++R TI+ + W G+ +D +Y++D+K + I+
Sbjct: 1939 WGDNELGSISRVKRDGTHRETILEALNLVGYKQQDWLGGIAIDWVAENIYWSDTKRNIIE 1998
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG-QLYEALALDL 322
A +DGS+ ++VS + LA+D
Sbjct: 1999 ----------------------------------VARLDGSHRYVVVSNLEKPTVLAVDP 2024
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS-TKIYWPNG-LTLDIATR 380
G+L+Y T + I R+G+DGS +++ T+ W G L LDI
Sbjct: 2025 LQGLLFYVTQQ--------------HIGRVGLDGSQPFVLVNQTRANWAVGSLVLDIEAT 2070
Query: 381 RVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+VY+ + D I +YDG R+Q++ L MGD
Sbjct: 2071 KVYWCERYPDAIMKVDYDGNLREQLLNESLNNPVALAKMGD 2111
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 12/133 (9%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL V +A+DWI H+YW S R++V ++++ T M L+
Sbjct: 621 LLTQGLKRVHAMAFDWINDHLYW--SNHKRMQVAPLRNLSKVLTFN---TDCDAMSLELD 675
Query: 203 PGTRWLFWTDWGE---NPRIERIGMDGSNRSTII----STKIYWPNGLTLDIATRRVYFA 255
P T L+WT W I MDG+++ + + + WP L +D T+ +Y+
Sbjct: 676 PTTGLLYWTQWESESCEAGIYSAWMDGTHKELLAKDTSTMPMQWPRSLDVDRRTKELYWC 735
Query: 256 DSKLDFIDCKSLE 268
D +L I+ L+
Sbjct: 736 DIRLSTIELMKLD 748
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 86/431 (19%), Positives = 162/431 (37%), Gaps = 62/431 (14%)
Query: 12 CDGKTDCPNGADEGPGC-DLAECKHKFGLCSNTCHPTPLGALC---------------TC 55
CD K DCP+ +DEG C + +C C + H P LC C
Sbjct: 5 CDSKADCPDMSDEGSECAEAPKCNEGQFRCGVSRHCIPNNWLCDGEFDCGKGDTSDELNC 64
Query: 56 PPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHS- 114
P G + Q N G C ++ G + C N+ + N C A+N S
Sbjct: 65 PNGATPKCRAFEGQCRN-----GDCLELSRFCDGHWDCD-NDELQCDKQNAACAALNCSF 118
Query: 115 -------------AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGG 161
+ + +S D +E + + + E + G
Sbjct: 119 NCKLTPQGARCYCPKDQVPESSNSTRCVDYDECSEPGTCDQVCRNTPGSYECSC---VSG 175
Query: 162 HIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ--PRGMMLDPSPGTRWLFWTDWGENPRI 219
+ SR I V L++D + + G ++ P PG + +N ++
Sbjct: 176 YAKTKGSRCRAINVPPTEPATLFFLSRDGVQRIGTNGEVIGP-PGAK--------DNDKV 226
Query: 220 ERIGMDGSNRSTIISTKIYWPNGLTLDIATR---RVYFADSKLDFIDCKSLEIKTNVNYS 276
DGS ++S + + + + R ++F+ +L + C+ ++ VN++
Sbjct: 227 TDKEGDGSAEEVLLSQPLRFVHAFEVWHRNRTLCSLFFSWPELQ-MRCQRVD-DARVNWT 284
Query: 277 TIFRKLYWIDEGGNGVPLKIGKAN-----MDGSNASILVSGQLYEALALDLENGMLYYST 331
F + + + L N D + + Y + L + + +
Sbjct: 285 LPFSSFVSPQQFFSELRLDWLSGNWYLFSEDDGLVYLCTNAMTYCRVILQQVDPLSSLAL 344
Query: 332 LKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
++F+TDW P + R +DG+NR+ +++ ++Y P+ +TLD+A VY+ D D
Sbjct: 345 DPTKGFMFYTDW--KPSLSRSLLDGTNRTVLVTDQVYHPSSVTLDLANELVYWIDIYKDE 402
Query: 392 IDFCNYDGTGR 402
++ +Y+G R
Sbjct: 403 VNRVDYEGRNR 413
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 21/140 (15%)
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
+FW+D +N I G+ II+T I P G +D R +YF+ + I C L
Sbjct: 1623 IFWSDIQQN-EISSAGISNGLIEPIINTNIEKPYGFAVDWIARNMYFSSGQ---IKCNIL 1678
Query: 268 EIKTNVNYSTIFR----------------KLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
N + TI K+YWI +G ++ ++N+DGS+ ++
Sbjct: 1679 ASNLNGEFVTIIHEDLNMVDSIVLDPANGKMYWIHSASDGSMSQLEQSNLDGSSRLLIYQ 1738
Query: 312 GQ-LYEALALDLENGMLYYS 330
+ ++L +D ++ LYY+
Sbjct: 1739 HENNLQSLTMDFDSQRLYYA 1758
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 89/227 (39%), Gaps = 48/227 (21%)
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEG-----GNGVP-LKIGKANMDGSNASILVSG-QLYEA 317
K+L I NV +F Y + + GNG P I +++GS + +L G + A
Sbjct: 575 KTLAIDVNVRGKAVF---YVVADSVASSFGNGEPSCSIRSQSLNGSVSRLLTQGLKRVHA 631
Query: 318 LALDLENGMLYYSTLK-----------------------------CTRWLFWTDWGEN-- 346
+A D N LY+S K T L+WT W
Sbjct: 632 MAFDWINDHLYWSNHKRMQVAPLRNLSKVLTFNTDCDAMSLELDPTTGLLYWTQWESESC 691
Query: 347 -PRIERIGMDGSNRSTII----STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
I MDG+++ + + + WP L +D T+ +Y+ D +L I+ DGTG
Sbjct: 692 EAGIYSAWMDGTHKELLAKDTSTMPMQWPRSLDVDRRTKELYWCDIRLSTIELMKLDGTG 751
Query: 402 RQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKT 448
R+ + D ++ ++ NG+ A + +L + A T
Sbjct: 752 REVLFKSDQFHPYS--IVQSNGLIYWADNKNFTILRFHAHQANLSST 796
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 108/275 (39%), Gaps = 25/275 (9%)
Query: 78 GYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G C Q+C +T + ++C C GY +E +N T F I + + D E+
Sbjct: 1851 GGCQQLCLSTSSTDHVCRCALGYDVEPNNPTGCVPRAEFIFYSIDVLQGVEMIDPTEQFD 1910
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLAKDNITQPR 195
+ +S + + Y +YW D+ L I +GT+R +L N+ +
Sbjct: 1911 TPSPALVPISRVSSASFIDYLAQRDTLYWGDNELGSISRVKRDGTHRETILEALNLVGYK 1970
Query: 196 GMMLDPSPGTRW----LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
W ++W+D N IE +DGS+R ++S + P L +D
Sbjct: 1971 QQDWLGGIAIDWVAENIYWSDTKRN-IIEVARLDGSHRYVVVSN-LEKPTVLAVDPLQGL 2028
Query: 252 VYFADSK------LDFIDCKSLEIKTNVNYST-------IFRKLYWIDEGGNGVPLKIGK 298
+++ + LD L +T N++ K+YW + P I K
Sbjct: 2029 LFYVTQQHIGRVGLDGSQPFVLVNQTRANWAVGSLVLDIEATKVYWCER----YPDAIMK 2084
Query: 299 ANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
+ DG+ L++ L +AL LY++ K
Sbjct: 2085 VDYDGNLREQLLNESLNNPVALAKMGDYLYWAENK 2119
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 121/306 (39%), Gaps = 51/306 (16%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLDPSPGTRWLFW 210
GL D+ +YW+D++ + I +G+ V+ ++ ++ P + S +++W
Sbjct: 1437 GLTLDYTQKRVYWVDAKSDSISSTMYDGSEHHVVLRNKEILSHPFAI----SVFENYVYW 1492
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS-KLDFIDCKSLEI 269
TDW I +GS+ + T P G+ + ++R+ + + + C L +
Sbjct: 1493 TDWRATSVIRANKWNGSDVQVLQRTHSQ-PFGIQVLHSSRQPWDRNPCGENNGGCSHLCL 1551
Query: 270 KTNV-NYSTIFRKLYWIDEGG--NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGM 326
+ + + +D N VP N +L+ + E +DL
Sbjct: 1552 LSGRGTFKCECPHVMRLDPANERNCVP-----------NEQVLLFVMVDEIRGIDLHQPN 1600
Query: 327 LYYSTLKCTRW-------------LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
+ T+ R +FW+D +N I G+ II+T I P G
Sbjct: 1601 --HHTIPTIRQSPRRIDFLVEESRIFWSDIQQN-EISSAGISNGLIEPIINTNIEKPYGF 1657
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD-NGVPALALDLE 432
+D R +YF+ ++ CN ++ +L EF + D N V ++ LD
Sbjct: 1658 AVDWIARNMYFSSGQIK----CN--------ILASNLNGEFVTIIHEDLNMVDSIVLDPA 1705
Query: 433 NGMLYY 438
NG +Y+
Sbjct: 1706 NGKMYW 1711
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 343 WGENP--RIERIGMDGSNRSTIIST-------KIYWPNGLTLDIATRRVYFADSKLDFID 393
WG+N I R+ DG++R TI+ + W G+ +D +Y++D+K + I+
Sbjct: 1939 WGDNELGSISRVKRDGTHRETILEALNLVGYKQQDWLGGIAIDWVAENIYWSDTKRNIIE 1998
Query: 394 FCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTE 441
DG+ R +++ + + T LA+D G+L+Y T+
Sbjct: 1999 VARLDGSHR--YVVVSNLEKPT----------VLAVDPLQGLLFYVTQ 2034
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALC----TCPPG 58
C+ + CDGK+DC +G+DEGP C C+ C ++ P +C CP G
Sbjct: 2754 CIPASWQCDGKSDCEDGSDEGPQCPSQACRPHLFQCKSSGRCIPQKWVCDGEKDCPSG 2811
>gi|390349825|ref|XP_787118.3| PREDICTED: low-density lipoprotein receptor-related protein 1-like
[Strongylocentrotus purpuratus]
Length = 4677
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/415 (30%), Positives = 181/415 (43%), Gaps = 104/415 (25%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILS- 62
C+ L +CDG C G DE CDL+ C C C P G +C CP G+++
Sbjct: 1195 CLPLHNLCDGAQQCIGGTDE-LDCDLSMCDK--AACKEECQVIPGKGVMCYCPEGKVIDP 1251
Query: 63 NDSVTC-QDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
DS C D C + G CSQ C N KG+Y+C C GY + D TCK+ + +LI S
Sbjct: 1252 EDSTRCILDTKMCTKRGRCSQQCINGKGTYVCKCYPGYQMASDGWTCKSNATANPYLIFS 1311
Query: 122 NR------------HSILVADLEEK-------------------GKDHRA---------- 140
NR +++LV +L K +R
Sbjct: 1312 NRNQLRRVNLATSEYNVLVFNLHNSIAVDFHYSNSSIYWTDVVDDKIYRGWLDENSPNAG 1371
Query: 141 ----QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ ++ +GL EGLA DWIGG++YW++S L++IEV +G R + N+ PR
Sbjct: 1372 LRNIEPVIEAGLATCEGLAVDWIGGNLYWVESHLDQIEVARLDGAMRTTVVASNMESPRA 1431
Query: 197 MMLDPSPGTRWLFWTDW-GENPRIERIGMDGSNRSTIISTKIY---WPNGLTLDIATRRV 252
+ LDP+ G +FWTDW PRIER M G+NRS I++ WPNGLT+D + +R+
Sbjct: 1432 IALDPTEGL--MFWTDWENRAPRIERASMSGANRSIIVNITQLEGGWPNGLTIDYSEKRI 1489
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+ D++ D I LY +GSN ++ G
Sbjct: 1490 YWIDARSD----------------AIHAALY------------------NGSNIFTVLKG 1515
Query: 313 Q--LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
LY A+ + G +FWTDW N + G N + I T
Sbjct: 1516 HNSLYHPFAITVFEGR-----------VFWTDWRSNTVYQANKFTGQNVTAIQKT 1559
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 155/313 (49%), Gaps = 57/313 (18%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDL---AECKHKFGLCSNTCHPTPLGALCTCPPG 58
+ C+ + +CD DC + +DEG C+ +C C T G +C CP G
Sbjct: 138 GNSCIAYSSICDFVPDCDDWSDEGAFCNPENGGDCTRMQCGDDQVCQETINGGMCICPIG 197
Query: 59 -EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
++ ++S C+D+NEC+ G C Q+C N GSY CSC GY E+ C++ A
Sbjct: 198 YQVNQSNSTICEDINECDIYGTCDQICKNIPGSYSCSCAGGY-KEFSEGRCQS--DEDAK 254
Query: 118 LIISNRHSILVADLE----------------------EKGK-------DHRAQ------- 141
L+++N ++L +++ +K K +H Q
Sbjct: 255 LLVANVDNLLQLNIDGSSINKTSLLAAMGTRAMDYNLKKNKVCWVNFGNHAEQLKCADLT 314
Query: 142 ---DIVVSGLDL----VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
+I V L L V+ +A DW+ G+IY +D ++ I VC G I + ++++P
Sbjct: 315 KMDNIEVKDLILDLSNVQQIALDWVTGNIYLMDEVVDAIIVCRFAGDICITVVDGDLSRP 374
Query: 195 RGMMLDPSPGTRWLFWTDWGENPR-----IERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
+G+ LDP G ++F+TDWG R IER MDGS R + TKI +P+G+T D A
Sbjct: 375 KGLTLDPKKG--FMFYTDWGTVARDKPAKIERANMDGSGRLNLNITKIVFPHGITADYAA 432
Query: 250 RRVYFADSKLDFI 262
+R+YFAD++L+ +
Sbjct: 433 QRIYFADTQLEMV 445
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 140/307 (45%), Gaps = 55/307 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPP 57
RC+ VCDG DC +G+DE P L C KH C N P A C
Sbjct: 3057 RCLPKDWVCDGDKDCHDGSDETICNVSPS-PLNNCTKHHLFQCDNG-KCIPQSARCNTSD 3114
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK-AINHSAA 116
++D V C+ C+ CSQ C + + C C EG+ L D TC +
Sbjct: 3115 ECGDNSDEVDCR----CDIDYPCSQRCVDLNAHFWCYCVEGFKLLDDQVTCALEADQPKP 3170
Query: 117 FLIISNRHSI----------------------LVADLEEKG---KDHRAQDIVVSGLDLV 151
+L+ SNR+ + L D EE+ D Q+ +S ++
Sbjct: 3171 YLLFSNRYQLRTVGVDGSNYTTLQVNVTNAVALDYDWEERMIYWSDVTLQNSKISRANIT 3230
Query: 152 ---------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+G+A DW G ++YW D LN IEV NG+ R + K+N+ +PR
Sbjct: 3231 HGTTEVLHDLGVLNPDGIAVDWAGRNLYWCDKGLNVIEVSRLNGSYRKTIIKENLDEPRA 3290
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ LD + G +FWTDWG+ P I R +DG + +++ KI WPN LT+D T RVY+ D
Sbjct: 3291 IALDITRGV--MFWTDWGDAPYIGRASLDGRYFTRLVTEKIQWPNALTVDYTTDRVYWGD 3348
Query: 257 SKLDFID 263
++ D I+
Sbjct: 3349 AREDRIE 3355
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 138/319 (43%), Gaps = 56/319 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
RC+++ +C+G +C + +DE C C++ C CTC G L
Sbjct: 3894 RCIDVNLLCNGVDNCQDRSDELDCTKNPSCHSGDIQCAHRCSLVGGVHYCTCHAGYELLP 3953
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY-------------------VLEYD 104
D V+C D+NEC Q G CSQ C N GSY CSC GY + +
Sbjct: 3954 DGVSCGDVNECRQFGICSQTCENLNGSYDCSCVAGYKPLRINGKIYCEALGGPPVLYIAE 4013
Query: 105 NHTCKAINHSAA---------------------------FLIISNRHS----ILVADLEE 133
T +N S A I+S +S + A L
Sbjct: 4014 EGTLHHMNTSGASSPYQTDSSVDLGTRIISMDMHYSQKKVFILSGHNSTGYRLYQAPLNS 4073
Query: 134 KGKDHRAQD----IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+ R D + LD EG+A DWI IYW DS ++ +EV + NG+ R L +
Sbjct: 4074 AARKKRQADENSMFELFELDQPEGVAVDWINDMIYWTDSSVHTVEVSNLNGSLRRTLISN 4133
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
P+ +++ P G +F+T+WG P I R MDGS+ I+ + P + +D +
Sbjct: 4134 TRGHPQSIVVHPKKGL--IFFTNWGRRPGINRAHMDGSHVERIVEDNLAQPTSIAIDYVS 4191
Query: 250 RRVYFADSKLDFIDCKSLE 268
R+Y+ADSK+ I+ +++
Sbjct: 4192 DRLYWADSKVRLIESSNMD 4210
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 142/343 (41%), Gaps = 92/343 (26%)
Query: 41 SNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQ----PGYCSQM----CTNTKGSYI 92
S TC+ C C G + S DS TC N ++ GY + C
Sbjct: 1995 STTCNGKNNDKKCACTAGYVTSADSTTCNGKNNDKKCACTAGYVTSADSITCNGKNNDRK 2054
Query: 93 CSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK------------------ 134
C+C GYV D+ TC + + FL+ S +I LE
Sbjct: 2055 CACTAGYVTSPDSTTCNGV---SEFLLYSTDETIRGISLEHPLDDKDMLTPITGHMLSVA 2111
Query: 135 -----------------------GKDHRAQDIVVSGLD-LVEGLAYDWIGGHIYWLDSRL 170
+DH + ++++ + +EG+A DWI G++YW D R
Sbjct: 2112 IDFHAAENFIYWIDTALYTLNRIKRDHTERQVLLTATNSRIEGIAVDWIAGNMYWTDQRN 2171
Query: 171 NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS 230
+ IEV NG+ R VL + I +PR +++ P G +L W DWG P+IER ++G NR+
Sbjct: 2172 DVIEVSRTNGSFRYVLISEGIDKPRPIVVHPVRG--YLIWADWGVEPKIERSLLNGENRT 2229
Query: 231 TII-STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
II S+KI WPNGL +D T LYW D G
Sbjct: 2230 VIINSSKINWPNGLVIDFNT------------------------------DMLYWCDAGH 2259
Query: 290 NGVPLKIGKANMDGSNASILVS--GQLYEALALDLENGMLYYS 330
N I + +++G N +++S + + A+ + + LY++
Sbjct: 2260 N----NIARVDLNGGNYKVILSDAAHINDPFAITMSHQYLYFT 2298
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 78/134 (58%), Gaps = 7/134 (5%)
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
HR +D++ + EG+A DWI ++YW D I V +G+ R +L K+N T PR +
Sbjct: 638 HR-EDLLNDYITNCEGIAVDWISKNLYWTDDGSKTISVARLDGSRRRLLLKENFTHPRAI 696
Query: 198 MLDPSPGTRWLFWTDW----GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
++DP G +++W+DW G+ RIER MDG NR+ ++ + WPNGL+LD +Y
Sbjct: 697 VVDPVDG--YMYWSDWSEGVGQKARIERAFMDGRNRTVFVNEYLQWPNGLSLDKDRGVLY 754
Query: 254 FADSKLDFIDCKSL 267
+ D+ D I K L
Sbjct: 755 WCDAFHDRISRKFL 768
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 45/227 (19%)
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDI--ATRRVYFADSKLDFIDCKSLEIKTNVNY 275
++ +G+DGSN +T+ ++ N + LD R +Y++D L S + N+ +
Sbjct: 3179 QLRTVGVDGSNYTTL---QVNVTNAVALDYDWEERMIYWSDVTLQ----NSKISRANITH 3231
Query: 276 STIF-------------------RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE 316
T R LYW D+G N + + + ++GS ++ L E
Sbjct: 3232 GTTEVLHDLGVLNPDGIAVDWAGRNLYWCDKGLNVIEV----SRLNGSYRKTIIKENLDE 3287
Query: 317 --ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
A+ALD+ G++ FWTDWG+ P I R +DG + +++ KI WPN LT
Sbjct: 3288 PRAIALDITRGVM-----------FWTDWGDAPYIGRASLDGRYFTRLVTEKIQWPNALT 3336
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+D T RVY+ D++ D I+ +++GT R V+ D+ F + GD
Sbjct: 3337 VDYTTDRVYWGDAREDRIESVSWNGTNRHTVVGSDVPHIFAMSMFGD 3383
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 24/186 (12%)
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLE------------IKTNVNYSTIFRKLYWIDEGG 289
GL +D +R+++ D +L I ++ + Y + R++YW
Sbjct: 2427 GLAVDYMEKRIFYTDIQLGNIQVVNVNGTGRRTIVAGIGSAEGIAYDPLMRQIYWTSYTN 2486
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN-PR 348
+ + I L +G +ALD C +FWT+W E PR
Sbjct: 2487 SSIGRLIIDEPTKEEVLVRLTAGDHPRGIALDY-----------CHSLMFWTNWNEAFPR 2535
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I+R G N + II+ +I PNG+ +D +R ++++D+K D I+ C+YDG R +++
Sbjct: 2536 IQRSSTSGQNVTNIITDQIQMPNGIGIDHKSRLLFWSDAKQDKIERCDYDGQNRVVLLIT 2595
Query: 409 DLMVEF 414
+ + F
Sbjct: 2596 EPVHPF 2601
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 70/124 (56%), Gaps = 7/124 (5%)
Query: 144 VVSGLDLVEGLAYDWIGGHIYWL---DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+V+G+ EG+AYD + IYW +S + R+ + DE +++ PRG+ LD
Sbjct: 2460 IVAGIGSAEGIAYDPLMRQIYWTSYTNSSIGRL-IIDEPTKEEVLVRLTAGDHPRGIALD 2518
Query: 201 PSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
+FWT+W E PRI+R G N + II+ +I PNG+ +D +R ++++D+K
Sbjct: 2519 YCHSL--MFWTNWNEAFPRIQRSSTSGQNVTNIITDQIQMPNGIGIDHKSRLLFWSDAKQ 2576
Query: 260 DFID 263
D I+
Sbjct: 2577 DKIE 2580
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 118/244 (48%), Gaps = 17/244 (6%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYI 92
C K G CS+ C G C CP + L D+ TC + + + T+ +G +
Sbjct: 1581 CGIKNGGCSDLCLLNGHGIACACPHLKKLHTDNKTCIN----DTVFFVISRPTDIRGVDV 1636
Query: 93 CSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH---RAQDI--VVSG 147
++GY T + ++++ + + I DL+ K + DI V+ G
Sbjct: 1637 ---DDGYYNVIPALTIPNVANASSIDHDTIENRIYWTDLQRKSINRAFINGTDIETVIEG 1693
Query: 148 LDLVEGLAYDWIGGHIYW--LDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+ LA DW+ ++YW L + I + +G+ + + N+T P+ ++++P+ G
Sbjct: 1694 IPYAYNLAIDWVSRNMYWTNLSPDKSTINIARLDGSFQNEIDNLNLTNPKSIVIEPTVGI 1753
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIY-WPNGLTLDIATRRVYFADSKLDFIDC 264
++W + G P IE+ MDG+N+++I++ + P GL +D + +R+Y+ D+ L I
Sbjct: 1754 --MYWINAGPIPSIEKARMDGTNQTSIVTGHVLNNPTGLAIDRSKQRLYWTDAGLFKIKT 1811
Query: 265 KSLE 268
+LE
Sbjct: 1812 SNLE 1815
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 168/453 (37%), Gaps = 79/453 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-------PGCDLAECKHKFGLCSNTCHPTPLGALCTCPP 57
CVN VCDG C + +DE P C + K K C + + LC
Sbjct: 3853 CVNHRFVCDGINTCGDNSDESFCTPTEPPLCTANQFKCKNHRCID------VNLLCNGVD 3906
Query: 58 GEILSNDSVTCQDMNECEQPG-YCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAA 116
+D + C C C+ C+ G + C+C+ GY L D +C +N
Sbjct: 3907 NCQDRSDELDCTKNPSCHSGDIQCAHRCSLVGGVHYCTCHAGYELLPDGVSCGDVNECRQ 3966
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
F I S L + V G I G IY C
Sbjct: 3967 FGICSQTCENLNGSYD---------------CSCVAGYKPLRINGKIY-----------C 4000
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN--PRIERIGMDGSNRSTII- 233
+ G ++ I + + + G + TD + RI + M S + I
Sbjct: 4001 EALGGPPVLY----IAEEGTLHHMNTSGASSPYQTDSSVDLGTRIISMDMHYSQKKVFIL 4056
Query: 234 ---STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN 290
++ Y L+ A R+ AD F + L+ V I +YW D +
Sbjct: 4057 SGHNSTGYRLYQAPLNSAARKKRQADENSMF-ELFELDQPEGVAVDWINDMIYWTDSSVH 4115
Query: 291 GVPLKIGKANMDGSNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
V + +N++GS L+S +++ + + G++ F+T+WG P
Sbjct: 4116 TVEV----SNLNGSLRRTLISNTRGHPQSIVVHPKKGLI-----------FFTNWGRRPG 4160
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I R MDGS+ I+ + P + +D + R+Y+ADSK+ I+ N DG R V+
Sbjct: 4161 INRAHMDGSHVERIVEDNLAQPTSIAIDYVSDRLYWADSKVRLIESSNMDGGDRVPVV-- 4218
Query: 409 DLMVEFTNDLMGDNGVPALALDLENGMLYYSTE 441
+G ++D+ ++Y ST+
Sbjct: 4219 ---------TFPQSGGSPFSIDIFEDLIYGSTK 4242
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 68/125 (54%), Gaps = 21/125 (16%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTRWLF 339
LYW++ + +I A +DG+ + +V+ + A+ALD G++ F
Sbjct: 1398 LYWVESHLD----QIEVARLDGAMRTTVVASNMESPRAIALDPTEGLM-----------F 1442
Query: 340 WTDW-GENPRIERIGMDGSNRSTIISTKIY---WPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDW PRIER M G+NRS I++ WPNGLT+D + +R+Y+ D++ D I
Sbjct: 1443 WTDWENRAPRIERASMSGANRSIIVNITQLEGGWPNGLTIDYSEKRIYWIDARSDAIHAA 1502
Query: 396 NYDGT 400
Y+G+
Sbjct: 1503 LYNGS 1507
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 149/385 (38%), Gaps = 69/385 (17%)
Query: 41 SNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQ----PGYC----SQMCTNTKGSYI 92
S TC+ C C G + S DS TC N + GY S C
Sbjct: 1947 STTCNGKNNDRKCACTAGYVTSPDSTTCNGKNNDRKCACTAGYVTSPDSTTCNGKNNDKK 2006
Query: 93 CSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD-LEEKGKDHRAQDIVVSG-LDL 150
C+C GYV D+ TC N+ + + AD + GK++ + +G +
Sbjct: 2007 CACTAGYVTSADSTTCNGKNNDKKCACTAGY--VTSADSITCNGKNNDRKCACTAGYVTS 2064
Query: 151 VEGLAYDWIGGHI-YWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML----DPSPGT 205
+ + + + Y D + I + + KD +T G ML D
Sbjct: 2065 PDSTTCNGVSEFLLYSTDETIRGISL------EHPLDDKDMLTPITGHMLSVAIDFHAAE 2118
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+++W D + RI D + R +++ G+ +D +Y+ D + D I+
Sbjct: 2119 NFIYWIDTALYT-LNRIKRDHTERQVLLTATNSRIEGIAVDWIAGNMYWTDQRNDVIEVS 2177
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
+TN ++ + I EG +D
Sbjct: 2178 ----RTNGSFRYVL-----ISEG-------------------------------IDKPRP 2197
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII-STKIYWPNGLTLDIATRRVYF 384
++ + +L W DWG P+IER ++G NR+ II S+KI WPNGL +D T +Y+
Sbjct: 2198 IVVHPVRG---YLIWADWGVEPKIERSLLNGENRTVIINSSKINWPNGLVIDFNTDMLYW 2254
Query: 385 ADSKLDFIDFCNYDGTGRQQVILID 409
D+ + I + +G G +VIL D
Sbjct: 2255 CDAGHNNIARVDLNG-GNYKVILSD 2278
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 337 WLFWTDWGENPR-----IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
++F+TDWG R IER MDGS R + TKI +P+G+T D A +R+YFAD++L+
Sbjct: 385 FMFYTDWGTVARDKPAKIERANMDGSGRLNLNITKIVFPHGITADYAAQRIYFADTQLEM 444
Query: 392 IDFCNYDGTGRQQVILIDLMVEF 414
+ YDGTG Q++I V +
Sbjct: 445 VQTARYDGTG-QRIIAQGSRVSY 466
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 134/312 (42%), Gaps = 56/312 (17%)
Query: 70 DMNECE-QPGYCSQMCTNTKGSY-ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL 127
DMN C G CSQ+C G+ C+C G V D +C+ + A+++ S R+ +
Sbjct: 2344 DMNPCSINNGNCSQICFYLGGTRRTCACAHGTVAN-DGLSCEEYD---AYILYSERNGVK 2399
Query: 128 VADLEEKGKDHRAQDIVVSGLDL--VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
+L ++ + ++ V GLA D++ I++ D +L I+V + NGT R
Sbjct: 2400 SINLYNTSDKNQPIQPLSDAENIRNVIGLAVDYMEKRIFYTDIQLGNIQVVNVNGTGRRT 2459
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGL 243
+ I G+ DP R ++WT + N I R+ +D + ++ T P G+
Sbjct: 2460 IVA-GIGSAEGIAYDPL--MRQIYWTSY-TNSSIGRLIIDEPTKEEVLVRLTAGDHPRGI 2515
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
LD C SL TN N P +I +++ G
Sbjct: 2516 ALDY----------------CHSLMFWTNWN---------------EAFP-RIQRSSTSG 2543
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
N + +++ Q+ + +++ +R LFW+D ++ +IER DG NR ++
Sbjct: 2544 QNVTNIITDQIQMPNGIGIDHK---------SRLLFWSDAKQD-KIERCDYDGQNRVVLL 2593
Query: 364 STKIYWPNGLTL 375
T+ P GL +
Sbjct: 2594 ITEPVHPFGLAV 2605
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 21/136 (15%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
I + LYW D+G + + A +DGS +L+ A+ +D +G +Y
Sbjct: 658 ISKNLYWTDDGSKTISV----ARLDGSRRRLLLKENFTHPRAIVVDPVDGYMY------- 706
Query: 336 RWLFWTDW----GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
W+DW G+ RIER MDG NR+ ++ + WPNGL+LD +Y+ D+ D
Sbjct: 707 ----WSDWSEGVGQKARIERAFMDGRNRTVFVNEYLQWPNGLSLDKDRGVLYWCDAFHDR 762
Query: 392 IDFCNYDGTGRQQVIL 407
I +GTG V +
Sbjct: 763 ISRKFLNGTGDGTVTI 778
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 83/178 (46%), Gaps = 15/178 (8%)
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
I +IYW + I R + + ++ + + + N+ + R +YW + +
Sbjct: 1663 IENRIYWTDLQRKSI--NRAFINGTDIETV-IEGIPYAYNLAIDWVSRNMYWTNLSPDKS 1719
Query: 293 PLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+ I A +DGS + + + L ++ +E + ++W + G P IE+
Sbjct: 1720 TINI--ARLDGSFQNEIDNLNLTNPKSIVIEPTVGI---------MYWINAGPIPSIEKA 1768
Query: 353 GMDGSNRSTIISTKIY-WPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
MDG+N+++I++ + P GL +D + +R+Y+ D+ L I N +G Q + +D
Sbjct: 1769 RMDGTNQTSIVTGHVLNNPTGLAIDRSKQRLYWTDAGLFKIKTSNLEGGNIQDFLSLD 1826
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
A+++ + + +N + +I+ + + G+ D ++W D++
Sbjct: 2516 ALDYCHSLMFWTNWNEAFPRIQRSSTSGQNVTNIITDQIQMPNGIGIDHKSRLLFWSDAK 2575
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
++IE CD +G NR+VL P G+ + +L+WTDW
Sbjct: 2576 QDKIERCDYDGQNRVVLLITEPVHPFGLAV----FDDYLYWTDW 2615
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V + L D+ +YW D+R +RIE NGTNR + ++ M +
Sbjct: 3324 LVTEKIQWPNALTVDYTTDRVYWGDAREDRIESVSWNGTNRHTVVGSDVPHIFAMSM--- 3380
Query: 203 PGTRWLFWTDWGENPRIER 221
+++WTDW + R++R
Sbjct: 3381 -FGDYIYWTDWDQR-RVKR 3397
>gi|157127000|ref|XP_001661035.1| low-density lipoprotein receptor (ldl) [Aedes aegypti]
gi|108873056|gb|EAT37281.1| AAEL010712-PA [Aedes aegypti]
Length = 2036
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 183/440 (41%), Gaps = 99/440 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLG-ALCTCPPGEILSN 63
C+N VCDG DC NG DE C + C C G C C G +L
Sbjct: 541 CINQKNVCDGHKDCVNGEDE-LRCPIVHRCGAHSSCEQQCMTAYSGREECKCRMGFLLHG 599
Query: 64 DSVTCQDMNECE--QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+ C D++EC+ CSQ C NT GSY C C GYVL DN TCKA+ A L+++
Sbjct: 600 NGYNCTDIDECKITSNPVCSQECINTMGSYRCDCKPGYVLRPDNRTCKAVG-GAVKLLMA 658
Query: 122 NRHSILVADLEE-------KGKDHR-------------------------------AQDI 143
NR I L KG + +D+
Sbjct: 659 NRADIRQVSLSNNQYTSIVKGLPNAIALDYHYKKDLLFWTDVSIDVIKRSYLNGTGVKDV 718
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ GL+ GLA DWI ++W DS R+EV +G R V+A +++ +PR + + P
Sbjct: 719 IKWGLESPGGLAVDWIHDLLFWTDSGTRRVEVATFDGKLRAVIAANDLDKPRAIAV--HP 776
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +FWTDWG P+IER MDGS R TI+S I+WPNGL +D T R+Y+AD+K
Sbjct: 777 GQAIIFWTDWGTVPKIERAFMDGSVRRTIVSESIFWPNGLAIDYTTNRIYWADAK----- 831
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
I A+ DG ++S L A+ L
Sbjct: 832 ------------------------------HVIESADFDGRGRKKILSNNLPHPFAMTLF 861
Query: 324 NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 383
+Y WTDW ++G I+ +++P +DI + +
Sbjct: 862 EDSMY-----------WTDWHTRTVSSANKVNGRGYR-IVHEGLHFP----MDIQS---F 902
Query: 384 FADSKLDFIDFCNYDGTGRQ 403
+ D+ + C D GR+
Sbjct: 903 HPSRQPDYQNHCPLDSMGRR 922
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 131/331 (39%), Gaps = 93/331 (28%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEE---- 133
G CS +C C+C G L+ D TC N L+I+ + I V L+
Sbjct: 923 GGCSHLCLPNGNHRRCACPIGLSLKGDQRTCS--NVPDKLLLIARKKDIRVRQLDSDDPS 980
Query: 134 KGKD----------------------------------------HRAQDIVVSGLDLVEG 153
KG D + + I+ S L G
Sbjct: 981 KGVDMVVPLDGIKSNVAIDWCSQTNVIYWTDVGKSIISRAFINGSQQEAIIKSNLISPAG 1040
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
LA DWI IYW D+ NRIEV +G R +L + + +PR +++ PS G ++FW+DW
Sbjct: 1041 LALDWITDKIYWTDAGTNRIEVASTDGKQRTLLIWERLDKPRDIVVHPSDG--YMFWSDW 1098
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
G NP IER GMDGS R T++S + WPNGL LD R+YF D K LE
Sbjct: 1099 GSNPLIERAGMDGSGRVTLVSENLQWPNGLALDTDNHRLYFVDGGT-----KLLEF---- 1149
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
N DG+ + L++ L LD+ +Y
Sbjct: 1150 -------------------------VNFDGTGRNRLITEGLKHPFGLDVYGQKVY----- 1179
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
WTDW + + G N++ +++
Sbjct: 1180 ------WTDWDTHSIQVANKLTGQNKTVVLA 1204
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 108/229 (47%), Gaps = 47/229 (20%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVL-EYDNHTCKAINHSAAFLIIS--------------- 121
G CS +C G Y C C G ++ + N C+ I +L+I+
Sbjct: 1535 GGCSHLCLRNPGGYSCKCPTGLLMKDGSNKECRTI--PDEYLLIALRSGIGRISLDTQDM 1592
Query: 122 --------------------NRHSILVADLEEKGKDH-------RAQDIVVSGLDLVEGL 154
+R I AD+ + IV SGL G+
Sbjct: 1593 FDVVLPIEGVHGVVALDYHFDRMYIFYADVNVDAIRRVSINDFSNTKVIVSSGLSTPNGI 1652
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DW+ ++YW D+ L +IEV +G+ R + + PR ++L P G ++FWTDWG
Sbjct: 1653 AVDWLADNLYWTDAALKKIEVSRLDGSCRKAVLTGGLDDPRSIILYPKRG--FMFWTDWG 1710
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+ PRIER MDGS R +II +++ +P GL +D A +++Y+AD++ D I+
Sbjct: 1711 QAPRIERAYMDGSERRSIIDSELGFPTGLAIDFAMKKLYWADAQQDRIE 1759
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 110/246 (44%), Gaps = 33/246 (13%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYI 92
CK + G CS C +P C CP G L++D+ T C + Y+
Sbjct: 1226 CKPRNGGCSYICLLSPTRYTCACPIGIQLNDDAKT----------------CKDGPSKYL 1269
Query: 93 CSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILV---------AD------LEEKGKD 137
+ + + + I+ ISN ++ V AD +
Sbjct: 1270 IFAHRSDIRQVSLDSDYQIDVVLPLPPISNAVALDVDTVTGDVYWADTVEDVIMRSSPNG 1329
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+ ++ +D V+ L D IG IYW DS IEV + +G+ R VL ++ PRG+
Sbjct: 1330 MHVKQVLSESMDSVDSLVIDSIGRKIYWADSHRCSIEVSELDGSVRTVLVWHDLDHPRGI 1389
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LD G +LFW+DW + P IER MDG +R I++T + + +GL +D R+Y+ DS
Sbjct: 1390 ALDYDSG--YLFWSDWRKEPVIERADMDGEHRKRIVTTDLGFVSGLAVDSVENRIYWTDS 1447
Query: 258 KLDFID 263
K I+
Sbjct: 1448 KAKRIE 1453
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 32/205 (15%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDI--ATRRVYFADSKLDFIDCKS---LEIKTNV 273
I ++ +D + ++ N + LD+ T VY+AD+ D I S + +K +
Sbjct: 1277 IRQVSLDSDYQIDVVLPLPPISNAVALDVDTVTGDVYWADTVEDVIMRSSPNGMHVKQVL 1336
Query: 274 NYS----------TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALD 321
+ S +I RK+YW D + + + +DGS ++LV L +ALD
Sbjct: 1337 SESMDSVDSLVIDSIGRKIYWADSHRCSIEV----SELDGSVRTVLVWHDLDHPRGIALD 1392
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 381
++G +LFW+DW + P IER MDG +R I++T + + +GL +D R
Sbjct: 1393 YDSG-----------YLFWSDWRKEPVIERADMDGEHRKRIVTTDLGFVSGLAVDSVENR 1441
Query: 382 VYFADSKLDFIDFCNYDGTGRQQVI 406
+Y+ DSK I+ C+++G R+ ++
Sbjct: 1442 IYWTDSKAKRIESCDFNGNSRKILL 1466
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 142/318 (44%), Gaps = 43/318 (13%)
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
A+++ + +L S+ V + + +HR + IV + L V GLA D + IYW DS+
Sbjct: 1390 ALDYDSGYLFWSDWRKEPVIERADMDGEHRKR-IVTTDLGFVSGLAVDSVENRIYWTDSK 1448
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
RIE CD NG +R +L +N++ P + + T ++WTDW + + S
Sbjct: 1449 AKRIESCDFNGNSRKILL-NNLSHPYALTV----TTSTVYWTDW-----VTKALHSVSKL 1498
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFI-----DCKSLEIKTNVNYSTIFRKLYW 284
+T K+ +D+ + +DS+ DF C L ++ YS
Sbjct: 1499 NTSKVRKVAKDLEELMDVKV-VLGPSDSQDDFCGKNNGGCSHLCLRNPGGYSCKCPTGLL 1557
Query: 285 IDEGGNG-----------VPLK--IGKANMDGSNA--SILVSGQLYEALALDLENGMLYY 329
+ +G N + L+ IG+ ++D + +L ++ +ALD +Y
Sbjct: 1558 MKDGSNKECRTIPDEYLLIALRSGIGRISLDTQDMFDVVLPIEGVHGVVALDYHFDRMY- 1616
Query: 330 STLKCTRWLFWTDWGENPRIERIGM-DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 388
+F+ D + I R+ + D SN I+S+ + PNG+ +D +Y+ D+
Sbjct: 1617 --------IFYADVNVDA-IRRVSINDFSNTKVIVSSGLSTPNGIAVDWLADNLYWTDAA 1667
Query: 389 LDFIDFCNYDGTGRQQVI 406
L I+ DG+ R+ V+
Sbjct: 1668 LKKIEVSRLDGSCRKAVL 1685
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 28/182 (15%)
Query: 269 IKTNV--NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGM 326
IK+NV ++ + +YW D G + I +A ++GS ++ L L L+
Sbjct: 992 IKSNVAIDWCSQTNVIYWTDVGKS----IISRAFINGSQQEAIIKSNLISPAGLALD--- 1044
Query: 327 LYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 386
T ++WTD G N RIE DG R+ +I ++ P + + + ++++D
Sbjct: 1045 ------WITDKIYWTDAGTN-RIEVASTDGKQRTLLIWERLDKPRDIVVHPSDGYMFWSD 1097
Query: 387 -SKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEF 445
I+ DG+GR V L+ +++ N LALD +N LY+ G +
Sbjct: 1098 WGSNPLIERAGMDGSGR--VTLVSENLQWPN---------GLALDTDNHRLYFVDGGTKL 1146
Query: 446 LK 447
L+
Sbjct: 1147 LE 1148
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ I+ S L GLA D+ +YW D++ +RIE+CD +G R + G L
Sbjct: 1726 RSIIDSELGFPTGLAIDFAMKKLYWADAQQDRIEMCDFDGKRRTRVIS-QAAHSFGFTLT 1784
Query: 201 PSPGTRWLFWTDWGENPRIER 221
+++WTDW N ++R
Sbjct: 1785 GG----YMYWTDW-HNKSVQR 1800
>gi|195474641|ref|XP_002089599.1| GE19184 [Drosophila yakuba]
gi|194175700|gb|EDW89311.1| GE19184 [Drosophila yakuba]
Length = 4693
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/370 (32%), Positives = 171/370 (46%), Gaps = 67/370 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV + ++CDGK DC + DEG C C CS+ CH TP G +C+CP L +
Sbjct: 1196 CVTVDQLCDGKNDCEDTTDEGFLCADKLCDRGHE-CSHRCHNTPEGYICSCPDHLYLQPN 1254
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
C + C+ CSQ+C ++ Y C C +G+ L +D TCK+ ++I +NR
Sbjct: 1255 GKRCSMQHACDHWDTCSQVCESSGKGYDCRCLDGFDLAFDRFTCKSTAPDEPYVIFTNRQ 1314
Query: 125 SILVADLEE----------------------------------KGKDHRAQ--------- 141
I +L+ K +R Q
Sbjct: 1315 DIKGINLKTLNVGNFYSSLRNIIALDFLYNNESNVEIYWTDVIDDKIYRGQLVGESLRNV 1374
Query: 142 -DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++ SGL EGLA DW+G ++YW+DS L++IEV NG+ R L N+ PR + LD
Sbjct: 1375 EAVIHSGLSTTEGLAVDWVGKNLYWIDSNLDQIEVAKLNGSFRRTLIAGNMESPRAIALD 1434
Query: 201 PSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIST---KIYWPNGLTLDIATRRVYFAD 256
P G LFWTDW +N PRIER M G R I ++ WPNGLTLD +RVY+ D
Sbjct: 1435 PREGL--LFWTDWDDNSPRIERASMSGDGRRMISTSWQLSAGWPNGLTLDYTQKRVYWVD 1492
Query: 257 SKLDFIDC------------KSLEIKTNVNYSTIFRK-LYWIDEGGNGVPLKIGKANMDG 303
+K D I ++ EI ++ ++F +YW D V ++ K N G
Sbjct: 1493 AKSDSISSTMYDGSEHHVVLRNKEILSHPFAISVFENYVYWTDWRTTSV-IRANKWN--G 1549
Query: 304 SNASILVSGQ 313
S+ +L Q
Sbjct: 1550 SDVQVLQRTQ 1559
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 191/412 (46%), Gaps = 87/412 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EILSN 63
C++ +CD + DC + +DE C++ EC +C + C +G C C G ++L
Sbjct: 2980 CIHADLLCDRRNDCADFSDE-ELCNVNECLIP-DICEHECEDKVVGYQCHCRSGFKLLPK 3037
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
+ C D++EC + CSQ+C NT GSY C C +GY L D+HTCKA ++ + LI SNR
Sbjct: 3038 STHLCTDIDECSEQQPCSQICVNTYGSYKCLCAKGYAL-VDHHTCKATSNVSMELIFSNR 3096
Query: 124 HSILVADLEEKG---------------------------------------KDHRAQDIV 144
+ I D+ G K+++ Q +
Sbjct: 3097 YYIRQVDMTGNGSILINELSNAVALDYDWDSQCLYWSDVTSTVGTIKRHCPKENKTQTLH 3156
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ L +GLA DW+ ++YW D L+ IEV +G R VL + + +PRG+ L P
Sbjct: 3157 QAMLKNPDGLAVDWVAKNLYWCDKGLDTIEVSQLDGKYRKVLINEYLREPRGIALHPY-- 3214
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
+ +FW+DWG+ P I + GMDGSN II + WPN LT+ T+++++ D++ D I
Sbjct: 3215 QQHIFWSDWGDTPHIGKAGMDGSNPKMIIRDGLGWPNALTISFETQQLFWGDAREDTISV 3274
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
L+ GN L + + SI + L+ A+ +
Sbjct: 3275 SDLD--------------------GNHTRLLLAR--------SINPALNLHHIFAIAVWE 3306
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGM-DGSNRSTIISTKIYWPNGLTL 375
G +Y W+DW E IE + +G N +T+I+T I+ P L +
Sbjct: 3307 GHIY-----------WSDW-ETKSIEYCSIFNGQNCTTLITT-IHRPMDLRV 3345
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 155/417 (37%), Gaps = 96/417 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ + CDGK DC +G+DE + C H G GA C ++L +
Sbjct: 2937 CIFKNQTCDGKLDCSDGSDEAS----SLCAHTRGCNGTDDFRCKNGA---CIHADLLCDR 2989
Query: 65 SVTCQD--------MNECEQPGYCSQMCTNTKGSYICSCNEGY-VLEYDNHTCKAINHSA 115
C D +NEC P C C + Y C C G+ +L H C
Sbjct: 2990 RNDCADFSDEELCNVNECLIPDICEHECEDKVVGYQCHCRSGFKLLPKSTHLC------- 3042
Query: 116 AFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGL---AYDWIGGHIYWLDSRL-- 170
D++E + I V+ + L Y + H S +
Sbjct: 3043 -------------TDIDECSEQQPCSQICVNTYGSYKCLCAKGYALVDHHTCKATSNVSM 3089
Query: 171 -----NR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP-RIERI 222
NR I D G I++ + + LD ++ L+W+D I+R
Sbjct: 3090 ELIFSNRYYIRQVDMTGNGSILINE----LSNAVALDYDWDSQCLYWSDVTSTVGTIKRH 3145
Query: 223 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
+ T+ + P+GL +D + + L
Sbjct: 3146 CPKENKTQTLHQAMLKNPDGLAVDW------------------------------VAKNL 3175
Query: 283 YWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD 342
YW D+G + + + + +DG +L++ L E + L + +FW+D
Sbjct: 3176 YWCDKGLDTIEV----SQLDGKYRKVLINEYLREPRGIALHPYQQH---------IFWSD 3222
Query: 343 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
WG+ P I + GMDGSN II + WPN LT+ T+++++ D++ D I + DG
Sbjct: 3223 WGDTPHIGKAGMDGSNPKMIIRDGLGWPNALTISFETQQLFWGDAREDTISVSDLDG 3279
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 92/215 (42%), Gaps = 58/215 (26%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI---------EVCDENGTN-RIVLAKD 189
Q +++ VEGLAYD + ++W + I E D+N + + VL+
Sbjct: 2317 GQRVLLEQQQRVEGLAYDIVNEQLFWTSNNNATIRSVELRHLSEHADQNLIHVKKVLSLR 2376
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248
+PRG+ ++P G ++WT+W E +P I+R + G II T I PN LTLD+
Sbjct: 2377 ENDKPRGIAVEPCLGM--IYWTNWNEGSPCIQRSYLTGYGTEVIIKTDIKMPNALTLDLE 2434
Query: 249 TRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
+++Y+AD++LD KI + N DGSN +
Sbjct: 2435 QQKLYWADARLD----------------------------------KIERTNYDGSNRVV 2460
Query: 309 LVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L A A M Y L LFWTDW
Sbjct: 2461 LAHSTPKHAFA------MAVYGDL-----LFWTDW 2484
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL-SN 63
C+ L++ CDG+ DC N + CD + CS C TP GA C CP ++ S+
Sbjct: 125 CLELSRFCDGRWDCDNDELQ---CDKQDAACAALNCSFNCKLTPQGARCYCPKDQVPESS 181
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN 112
+S C D +EC +PG C Q+C NT GSY CSC GY + C+AIN
Sbjct: 182 NSTRCVDYDECSEPGTCDQLCRNTPGSYECSCVSGYA-KTKGGRCRAIN 229
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 122/327 (37%), Gaps = 83/327 (25%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG--CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + +CDG DC DE L +C+H C N C
Sbjct: 3771 CIRNSALCDGVNDCGENEDESDAVCAALPKCRHDQFQCEND----------DCISKAFRC 3820
Query: 63 NDSVTCQDMNE---CEQP----GYCSQMCTNTK-GSYICSCNEGYVL-EYDNHTCKAINH 113
+ C D ++ C+ P G CSQ+C K G + C C +GY N TC A
Sbjct: 3821 DGQYNCVDGSDEMNCQPPVCGFGSCSQICIEKKAGHFNCKCTDGYHKGPEKNATCLASGP 3880
Query: 114 SAAFLIISNR-------------------------------------------------- 123
L+ S +
Sbjct: 3881 DQILLLASEQEFRFILPAKQEGTTIVGFFQTDSLKIDVFDILIRPKDTLLFWIDSHHGKV 3940
Query: 124 HSILVADLEEKGKDHRAQDIV-------VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
H++ +A +G R + + + LD + LA DWI +Y +DSR N+I
Sbjct: 3941 HTMKIATPHVEGTGVRVRRDLKELTAFNIPELDDPKSLAVDWISQRVYIIDSRHNQILAT 4000
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 236
D G I L + P ++L+P +R + W+ EN I +DGSN+ +++
Sbjct: 4001 DIEGKKYISLVSTGMN-PTDIVLEPE--SRIMIWSTL-EN-GILVASLDGSNKKSLVERD 4055
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFID 263
+ WP L++D T R+Y+AD + I+
Sbjct: 4056 VGWPISLSMDYPTGRLYWADYRKGTIE 4082
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 154/373 (41%), Gaps = 78/373 (20%)
Query: 136 KDHRAQDIVVSGLDLVE--------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
+D ++ ++ L+LV G+A DW+ G+IYW D++ N IEV +G++R V+
Sbjct: 1998 RDGTHRETILEALNLVGYKQQDWLGGIAIDWVAGNIYWSDTKRNIIEVARLDGSHRYVVV 2057
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS-TKIYWPNG-LTL 245
N+ +P + +DP G LF+ I R+G+DGS +++ T+ W G L L
Sbjct: 2058 S-NLEKPTVLAVDPLQGL--LFYV---TQQHIGRVGLDGSQPFVLVNQTRANWAVGSLVL 2111
Query: 246 DIATRRVYFADSKLDFI-------DCKSLEIKTNVNYSTIFRK----LYWIDEGGNGVPL 294
DI +VY+ + D + + + + ++N K LYW + N +
Sbjct: 2112 DIEATKVYWCERYPDALMKVDYDGNLREQLMNESLNNPVALAKMGDYLYWAENKYNEGII 2171
Query: 295 KIGK-ANMDGSNASILVSGQLYEAL----------------------ALDLENGM----- 326
++ AN+ S + L L L NG
Sbjct: 2172 RVAPLANLSQSKVVLQTEQDAIRDLKIYSKHLQRGSNPCAQSNGACDQLCLFNGTSAVCA 2231
Query: 327 -----LYYSTLKCTRWLFWTDWGENPRIERIGM-DGSNRS---TIISTKIYWPN--GLTL 375
L C + + + IE I M D +N++ +IS N +T
Sbjct: 2232 CAHSRLASDGTSCEPYENFLLFSYRSNIESIHMTDHANKNWPVQMISNSSLMRNVIAITY 2291
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGM 435
+ + VY++D +L I+ +++GTG++ ++ VE LA D+ N
Sbjct: 2292 NYEEQLVYYSDVQLSTINQVHFNGTGQRVLLEQQQRVE------------GLAYDIVNEQ 2339
Query: 436 LYYSTEGAEFLKT 448
L++++ +++
Sbjct: 2340 LFWTSNNNATIRS 2352
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 219 IERIGM-DGSNRS---TIISTKIYWPN--GLTLDIATRRVYFADSKLDFIDCKS------ 266
IE I M D +N++ +IS N +T + + VY++D +L I+
Sbjct: 2259 IESIHMTDHANKNWPVQMISNSSLMRNVIAITYNYEEQLVYYSDVQLSTINQVHFNGTGQ 2318
Query: 267 ---LEIKTNVN---YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
LE + V Y + +L+W N + ++ L+ + + L+L
Sbjct: 2319 RVLLEQQQRVEGLAYDIVNEQLFWT-SNNNATIRSVELRHLSEHADQNLI--HVKKVLSL 2375
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + C ++WT+W E +P I+R + G II T I PN LTLD+
Sbjct: 2376 RENDKPRGIAVEPCLGMIYWTNWNEGSPCIQRSYLTGYGTEVIIKTDIKMPNALTLDLEQ 2435
Query: 380 RRVYFADSKLDFIDFCNYDGTGR 402
+++Y+AD++LD I+ NYDG+ R
Sbjct: 2436 QKLYWADARLDKIERTNYDGSNR 2458
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 16/178 (8%)
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNITQPRGMMLDPSP 203
VS L DW+ G+ Y + + +C T R++L + + + LDP+
Sbjct: 332 VSPQQFFSELRLDWLSGNWYLVSEDDGLVYLCTNAMTYCRVILQQ--VDPLSSLALDPTK 389
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G ++F+TDW P + R +DGSNR+ +++ ++Y P+ +TLD+A VY+ D D ++
Sbjct: 390 G--FMFYTDW--TPSLSRSLLDGSNRTVLVTEQVYHPSSVTLDLANELVYWIDIYKDEVN 445
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
E + N T+ R L + VPLK A N+ L + +ALD
Sbjct: 446 RVDYEGR---NRWTLKRPL------DSPVPLKTIHAVEVFENSIYLAAWMDTAIVALD 494
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 12/133 (9%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL V +A+DWI H+YW S R++V ++++ T M L+
Sbjct: 662 LLTQGLKRVHAVAFDWINDHLYW--SNHKRMQVAPLRNLSKVLTFN---TDCDAMSLELD 716
Query: 203 PGTRWLFWTDWGEN---PRIERIGMDGSNRSTI----ISTKIYWPNGLTLDIATRRVYFA 255
P T L+WT W I MDG+++ + I+ + WP L +D T+ +Y+
Sbjct: 717 PTTGLLYWTQWESQSCEAGIYSAWMDGTHKELLAKGTIAMPMQWPRSLDVDRRTKELYWC 776
Query: 256 DSKLDFIDCKSLE 268
D +L I+ L+
Sbjct: 777 DIRLSTIELMKLD 789
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 94/227 (41%), Gaps = 59/227 (25%)
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPNGLTLDIATRRVYFADS 257
T L+W D E I R+ DG++R TI+ + W G+ +D +Y++D+
Sbjct: 1980 TDTLYWGD-NELGSISRVKRDGTHRETILEALNLVGYKQQDWLGGIAIDWVAGNIYWSDT 2038
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG-QLYE 316
K + I+ A +DGS+ ++VS +
Sbjct: 2039 KRNIIE----------------------------------VARLDGSHRYVVVSNLEKPT 2064
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS-TKIYWPNG-LT 374
LA+D G+L+Y T + I R+G+DGS +++ T+ W G L
Sbjct: 2065 VLAVDPLQGLLFYVTQQ--------------HIGRVGLDGSQPFVLVNQTRANWAVGSLV 2110
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
LDI +VY+ + D + +YDG R+Q++ L MGD
Sbjct: 2111 LDIEATKVYWCERYPDALMKVDYDGNLREQLMNESLNNPVALAKMGD 2157
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 13/95 (13%)
Query: 308 ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 367
IL +LALD G ++Y TDW P + R +DGSNR+ +++ ++
Sbjct: 373 ILQQVDPLSSLALDPTKGFMFY-----------TDW--TPSLSRSLLDGSNRTVLVTEQV 419
Query: 368 YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
Y P+ +TLD+A VY+ D D ++ +Y+G R
Sbjct: 420 YHPSSVTLDLANELVYWIDIYKDEVNRVDYEGRNR 454
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 91/226 (40%), Gaps = 46/226 (20%)
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEG----GNGVP-LKIGKANMDGSNASILVSG-QLYEAL 318
K+L I NV +F + D G GNG P I +++GS + +L G + A+
Sbjct: 616 KTLAIDVNVRGKAVFYVV--ADSGASPFGNGEPSCSIRSQSLNGSVSRLLTQGLKRVHAV 673
Query: 319 ALDLENGMLYYSTLK-----------------------------CTRWLFWTDWGEN--- 346
A D N LY+S K T L+WT W
Sbjct: 674 AFDWINDHLYWSNHKRMQVAPLRNLSKVLTFNTDCDAMSLELDPTTGLLYWTQWESQSCE 733
Query: 347 PRIERIGMDGSNRSTI----ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
I MDG+++ + I+ + WP L +D T+ +Y+ D +L I+ DGTGR
Sbjct: 734 AGIYSAWMDGTHKELLAKGTIAMPMQWPRSLDVDRRTKELYWCDIRLSTIELMKLDGTGR 793
Query: 403 QQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKT 448
+ + D ++ ++ NG+ A + + +L + A T
Sbjct: 794 EVLFKSDQFHPYS--IVQSNGLIYWADNKNSTILRFHAHQANLSNT 837
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 21/140 (15%)
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
+FW+D +N I G+ II+T I P+G +D R +YF+ + I C L
Sbjct: 1669 IFWSDIQQN-EISSAGISNGLIEPIINTNIEKPHGFAVDWIARNMYFSSGQ---IKCNIL 1724
Query: 268 EIKTNVNYSTIFR----------------KLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+ TI K+YWI +G ++ ++N+DGS ++
Sbjct: 1725 ASNLKGEFVTIIHEDLNMVDSIVLDPANGKMYWIHSASDGSMSQLEQSNLDGSGRLLIYQ 1784
Query: 312 GQ-LYEALALDLENGMLYYS 330
+ ++L +D ++ LYY+
Sbjct: 1785 HENNLQSLTMDFDSQRLYYA 1804
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 112/277 (40%), Gaps = 29/277 (10%)
Query: 78 GYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G C Q+C +T + ++C C GY +E +N T F I + + D E+
Sbjct: 1897 GGCQQLCLSTSSTEHVCRCALGYDVEPNNPTGCVPRAEFIFYSIDVLQGVEMIDPSEQFD 1956
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLAKDNITQPR 195
+ +S + + Y +YW D+ L I +GT+R +L N+ +
Sbjct: 1957 TPSPALVPISRVSSASFIDYLAQTDTLYWGDNELGSISRVKRDGTHRETILEALNLVGYK 2016
Query: 196 ------GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
G+ +D G ++W+D N IE +DGS+R ++S + P L +D
Sbjct: 2017 QQDWLGGIAIDWVAGN--IYWSDTKRN-IIEVARLDGSHRYVVVSN-LEKPTVLAVDPLQ 2072
Query: 250 RRVYFADSK------LDFIDCKSLEIKTNVNYST-------IFRKLYWIDEGGNGVPLKI 296
+++ + LD L +T N++ K+YW + P +
Sbjct: 2073 GLLFYVTQQHIGRVGLDGSQPFVLVNQTRANWAVGSLVLDIEATKVYWCER----YPDAL 2128
Query: 297 GKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
K + DG+ L++ L +AL LY++ K
Sbjct: 2129 MKVDYDGNLREQLMNESLNNPVALAKMGDYLYWAENK 2165
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 114/303 (37%), Gaps = 55/303 (18%)
Query: 72 NECEQP-GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C Q G C Q+C S +C+C L D +C+ + F SN SI + D
Sbjct: 2208 NPCAQSNGACDQLCLFNGTSAVCACAHSR-LASDGTSCEPYENFLLFSYRSNIESIHMTD 2266
Query: 131 LEEKGKDHRAQDIVVSGL-DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
K+ Q I S L V + Y++ +Y+ D +L+ I NGT + VL +
Sbjct: 2267 --HANKNWPVQMISNSSLMRNVIAITYNYEEQLVYYSDVQLSTINQVHFNGTGQRVLLEQ 2324
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
Q R L LFWT +N +TI S ++
Sbjct: 2325 ---QQRVEGLAYDIVNEQLFWT--------------SNNNATIRSVEL-----------R 2356
Query: 250 RRVYFADSKLDFIDCKSLEIKTN-----VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
AD L + K L ++ N + +YW + G P I ++ + G
Sbjct: 2357 HLSEHADQNLIHVK-KVLSLRENDKPRGIAVEPCLGMIYWTN-WNEGSPC-IQRSYLTGY 2413
Query: 305 NASILVSG--QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
+++ ++ AL LDLE LY W D +IER DGSNR +
Sbjct: 2414 GTEVIIKTDIKMPNALTLDLEQQKLY-----------WAD-ARLDKIERTNYDGSNRVVL 2461
Query: 363 IST 365
+
Sbjct: 2462 AHS 2464
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 20/114 (17%)
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPNGLTLDIATRRVYFADS 387
T L+W D E I R+ DG++R TI+ + W G+ +D +Y++D+
Sbjct: 1980 TDTLYWGD-NELGSISRVKRDGTHRETILEALNLVGYKQQDWLGGIAIDWVAGNIYWSDT 2038
Query: 388 KLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTE 441
K + I+ DG+ R +++ + + T LA+D G+L+Y T+
Sbjct: 2039 KRNIIEVARLDGSHR--YVVVSNLEKPT----------VLAVDPLQGLLFYVTQ 2080
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 23/147 (15%)
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
+D + + +NV+ IF Y+I + +M G N SIL++ +L A+AL
Sbjct: 3075 LVDHHTCKATSNVSMELIFSNRYYIRQ-----------VDMTG-NGSILIN-ELSNAVAL 3121
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
D + ++ L+W+D I+R + T+ + P+GL +D
Sbjct: 3122 DYDWD---------SQCLYWSDVTSTVGTIKRHCPKENKTQTLHQAMLKNPDGLAVDWVA 3172
Query: 380 RRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ +Y+ D LD I+ DG R+ +I
Sbjct: 3173 KNLYWCDKGLDTIEVSQLDGKYRKVLI 3199
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 14/102 (13%)
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
+FW+D +N I G+ II+T I P+G +D R +YF+ ++ CN
Sbjct: 1669 IFWSDIQQN-EISSAGISNGLIEPIINTNIEKPHGFAVDWIARNMYFSSGQIK----CN- 1722
Query: 398 DGTGRQQVILIDLMVEFTNDLMGD-NGVPALALDLENGMLYY 438
++ +L EF + D N V ++ LD NG +Y+
Sbjct: 1723 -------ILASNLKGEFVTIIHEDLNMVDSIVLDPANGKMYW 1757
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALC----TCPPG 58
C+ + CDGK+DC +G+DEGP C C+ C ++ P +C CP G
Sbjct: 2800 CIPASWQCDGKSDCEDGSDEGPQCPSRPCRPHLFQCKSSGRCIPQKWVCDGEKDCPSG 2857
>gi|91521930|dbj|BAE93218.1| vitellogenin receptor [Rhyparobia maderae]
Length = 1818
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 166/338 (49%), Gaps = 56/338 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C++L ++CDG +CP+ +DEG C+ ++ K C + C PTP GA+C C G ++ +
Sbjct: 217 CISLDELCDGVRNCPDYSDEGIKCNESKAACKAIKCDHLCVPTPRGAICVCKVGYTMAKN 276
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA-----------INH 113
TC D++EC + G C Q C N GSY C C+EGY L DNH+CKA N
Sbjct: 277 K-TCIDIDECLKYGICDQKCKNLPGSYSCYCDEGYFLADDNHSCKATGADPLLLFASTNQ 335
Query: 114 SAAFLIISNRHSILVADLE----------------------------EKGKDHRAQDIVV 145
F + N + ++ +LE E G + + +V
Sbjct: 336 IRGFYLEKNYYFVIADNLERAVGLSYDGNHVYWTELLHGEEAIMRIDEDGSN--METLVT 393
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+G+ E L DWI G+IY+ D I VC+ NG+ V+ ++I +PR + L P+ G
Sbjct: 394 AGIYQPEDLEVDWITGNIYFTDLEKKHIGVCNNNGSLCTVIVNEDIEKPRAIALLPNEG- 452
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+FWTDWG++ I + GMDGSN +S+ + +PNG+ +D R+Y+ D K+ I+
Sbjct: 453 -LMFWTDWGKS-IIAKAGMDGSNPKEFVSSGLEYPNGIAVDYHYSRLYWVDGKIAVIESI 510
Query: 266 SLE-----------IKTNVNYSTIFRKLYWIDEGGNGV 292
L+ +K + S LYW D G +
Sbjct: 511 KLDGSDRRLILKDVVKHPYSISVFENTLYWSDWHGRDI 548
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 154/341 (45%), Gaps = 63/341 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C++++ VCDG+ DC +G+DEG CD + C K C + C TP G C C G L +D
Sbjct: 1242 CISMSFVCDGRKDCSDGSDEGGLCD-SSCLGK-DPCEDICLKTPRGPRCKCSHGFALLSD 1299
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
CQD++EC+ C+Q+C N GS+ C+C+ G+ L D +CKA+ FL ++ +
Sbjct: 1300 GSRCQDIDECDMQA-CAQVCHNKPGSFSCACDPGFELRSDRISCKAVGRGKEFLFVTGKE 1358
Query: 125 SILVA-DLEEKGKDHRAQDIVVSGLD----------------------LVEG-------- 153
V +L + D V+GLD L+ G
Sbjct: 1359 IRRVTHELRFVKVAYPDNDFQVTGLDADSQLGMVYWSVGAANAIFSMSLIGGKKTQMKGI 1418
Query: 154 -----LAYDWIGGHIYWLDS-RLNRIEVC--DENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+A DWI ++Y++D + I+VC D+ +++ + + R + +DP G
Sbjct: 1419 GNPADIAVDWITHNVYYIDKDAIQTIKVCNLDDQLHAKVMDVSNGFSASR-LAVDPFHG- 1476
Query: 206 RWLFWTDWGE------NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
+LFW + + + R M+G NR + S + NG+ LD +++Y AD
Sbjct: 1477 -FLFWVEVNKWRIDVPASVLLRADMNGENRMEVASDHMMLVNGIALDFIRKKIYIADEHT 1535
Query: 260 DFIDCKSL------------EIKTNVNYSTIFRKLYWIDEG 288
+ I+C S +K +N + LYW+ G
Sbjct: 1536 NTIECMSYSGSDRHLIVSSEHVKHPINLALFEGTLYWLTAG 1576
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 112/321 (34%), Gaps = 96/321 (29%)
Query: 72 NECEQPGYCSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N CE G CS +C +Y C C E V D H+C + +++S+ H I V
Sbjct: 586 NPCEISG-CSDICLLAPNQTYTCGCPEHKVRGLDKHSCLD-SAKQEVMVVSSDHKIYVVG 643
Query: 131 LEEKGKD--------------------------------HRAQDI---------VVSGLD 149
+ G+ H+ ++ + S +
Sbjct: 644 HQFLGRQTFTQMTMDSVHHIGAITYNSLTGNVIIFDDAQHKLYNLGVKTGKLSQLASDIG 703
Query: 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ-PRGMMLDPSPGTRWL 208
+EG+ +D++G ++YW D++ +EV R +L + P + + P G +L
Sbjct: 704 SIEGMDFDYLGNNLYWCDAQKAPVEVMSLTTHERTILLHSFEGEVPLDVAVVPEEGVMFL 763
Query: 209 FWT---DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+ E P I+RI MDG T I + G TL
Sbjct: 764 SMSRHLSSSEGPHIDRISMDGKGEHTHIVES--YLEGPTL-------------------- 801
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG--QLYEALALDLE 323
N+ Y +++W D I A +G + I +G Q ++ +L E
Sbjct: 802 ------NLYYDKDMERIFWADPNSG----DIRSAAKNGMDEKIYKTGLVQPFDVSSLGHE 851
Query: 324 NGMLYYSTLKCTRWLFWTDWG 344
LFWTDWG
Sbjct: 852 --------------LFWTDWG 858
>gi|378405184|sp|P35950.2|LDLR_CRIGR RecName: Full=Low-density lipoprotein receptor; Short=LDL receptor;
Flags: Precursor
gi|344240074|gb|EGV96177.1| Low-density lipoprotein receptor [Cricetulus griseus]
Length = 862
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 157/300 (52%), Gaps = 46/300 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L KVCD DC + +DE C EC G CS+ C +G C CP G L
Sbjct: 290 CIALDKVCDSMRDCRDWSDEPIKDCRTNECLDNNGGCSHVCKDLKIGYECLCPNGFQLV- 348
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D C+D++EC++P C Q+C N +GSY C C G+ ++ CKA+ S A+L+ +NR
Sbjct: 349 DQHRCEDIDECQEPDTCDQLCVNLEGSYKCECRAGFHMDPHTRVCKAVG-SVAYLLFTNR 407
Query: 124 HSI------------LVADLE-------------------EKGKDHRA---------QDI 143
H + L+ +L+ +GK + A D
Sbjct: 408 HEVRKMTLDRSEYTSLIPNLKNVVALDTEVANNRIYWSDLSQGKIYSALMDQAPTLSYDT 467
Query: 144 VVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++SG L +GLA DWI G+IYW DS + V D G R L ++ ++PR +++DP
Sbjct: 468 IISGDLQAPDGLAVDWIHGNIYWTDSVPGSVSVADTKGIRRRTLFQEKGSRPRDIVVDPV 527
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWG +I++ G++G + ++++ I WPNG+TLDI + R+Y+ DSKL I
Sbjct: 528 HG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTEDIQWPNGITLDIPSGRLYWVDSKLHSI 585
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 164/411 (39%), Gaps = 69/411 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC--KHKFGLCSNTCHPTPLGALC-TCPPGEIL 61
C++ ++ CD + DC + +DE ++ +C +KF S C L +C +
Sbjct: 249 CIHGSRQCDREYDCKDMSDELGCINVTQCDGPNKFKCHSGEC--IALDKVCDSMRDCRDW 306
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
S++ + NEC + G CS +C + K Y C C G+ L D H C+ I+
Sbjct: 307 SDEPIKDCRTNECLDNNGGCSHVCKDLKIGYECLCPNGFQL-VDQHRCEDIDECQEPDTC 365
Query: 121 SNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG 180
L + + + D V +AY + + + R D +
Sbjct: 366 DQLCVNLEGSYKCECRAGFHMDPHTRVCKAVGSVAY------LLFTNRHEVRKMTLDRSE 419
Query: 181 TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS---NRSTIISTKI 237
++ N+ + LD ++W+D + +I MD + + TIIS +
Sbjct: 420 YTSLIPNLKNV-----VALDTEVANNRIYWSDLSQG-KIYSALMDQAPTLSYDTIISGDL 473
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P+GL +D I +YW D VP +
Sbjct: 474 QAPDGLAVDW------------------------------IHGNIYWTD----SVPGSVS 499
Query: 298 KANMDGSNASILVS--GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A+ G L G + +D +G +Y WTDWG +I++ G++
Sbjct: 500 VADTKGIRRRTLFQEKGSRPRDIVVDPVHGFMY-----------WTDWGTPAKIKKGGLN 548
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
G + ++++ I WPNG+TLDI + R+Y+ DSKL I + +G R+ ++
Sbjct: 549 GVDIYSLVTEDIQWPNGITLDIPSGRLYWVDSKLHSISSIDVNGGNRKTIL 599
>gi|326670753|ref|XP_001920039.3| PREDICTED: low-density lipoprotein receptor-related protein 1B [Danio
rerio]
Length = 4697
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/422 (30%), Positives = 175/422 (41%), Gaps = 104/422 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG+ DC + +DEGP C EC G CS+ C P G +C+CP G L +
Sbjct: 1278 CLPQNKICDGRMDCADRSDEGPFC--GECLQGNGGCSHQCSVIPSKGVVCSCPAGLHLGS 1335
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC G+ L+ D +C + + AF+I S R
Sbjct: 1336 DNRTCEAVDYCSAHLKCSQICEQHKTTVKCSCYPGWRLDADGESCHSTDPFEAFVIFSIR 1395
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1396 HEIRRIDLHKHDYSLLVPGLRNTIALDFHFSHSLLYWTDVVEDKIYRGKLSETGGVTGVE 1455
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G++YW+DS L++IEV NG R L + PR + +DP
Sbjct: 1456 VVIQHGLATPEGLAVDWIAGNLYWIDSNLDQIEVAKLNGEMRTTLIAGGMEHPRALAVDP 1515
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIY--WPNGLTLDIATRRVYFADSK 258
G LFWTDW PRIE M GS R + WPNGLTLD RR+ + D++
Sbjct: 1516 GQGI--LFWTDWDATFPRIEATSMSGSGRHVVYKDMEIGAWPNGLTLDHQERRIVWTDAR 1573
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--E 316
D I YS ++ DGS ++ G Y
Sbjct: 1574 SDAI------------YSALY----------------------DGSGVIEILRGHEYLSH 1599
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYW 369
A+ L G +Y WTDW N G N + I T +IY
Sbjct: 1600 PFAVSLFGGGVY-----------WTDWRTNTLARANKWTGHNVTVIQKTSAQPFDLEIYH 1648
Query: 370 PN 371
P+
Sbjct: 1649 PS 1650
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 144/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC++ +CD K DC + +DE C++ EC + C+ C P+G C C PG L
Sbjct: 3030 RCISEKSLCDMKDDCGDRSDE-KNCNVNECLNRRVSGCTQDCQDLPVGYKCKCWPGFHLK 3088
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY-VLEYDNHTCKAINHSAAFLIIS 121
ND TC D++EC CSQ CTNT GSY C C +GY D ++CK+++ FLI++
Sbjct: 3089 NDGRTCVDIDECSTTLPCSQNCTNTYGSYKCLCVDGYEASRKDPNSCKSLSAEEPFLILA 3148
Query: 122 NRH--------------------SILVADLEEKGK-----------DHRAQDIVVSGLDL 150
+ H +I+ D + K + R I ++G DL
Sbjct: 3149 DLHEIRKLSVDGSNYTLLKQGLNNIISLDFDYKKEFIYWIDSSRPSGRRINRIRLNGSDL 3208
Query: 151 V--------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
LA DWIG ++YW D +EV NG +L + P + LD
Sbjct: 3209 KIVHRTAVPSALAVDWIGKNLYWCDVERKTLEVSKSNGLYPTILVSSGLKNPTDLALDAQ 3268
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G ++FW D ENP + RIGMDG +S I++ +IY P+ LT+D +R+Y+AD
Sbjct: 3269 TG--YVFWIDCCENPHVGRIGMDGQGQSVIVNKEIYSPSALTIDYTNKRIYWAD 3320
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 150/310 (48%), Gaps = 53/310 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C++ K+C+G DC +G DEG C +L H+ C C T G C C G +
Sbjct: 212 KCIHFNKLCNGAKDCEDGFDEGVHCRELLSACHELH-CRYGCIMTRNGTFCFCADGFEVG 270
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN---HSAAFLI 119
D +C+D +EC G CSQ C NT GS+ CSC +G+ L+ + +C A + S A L+
Sbjct: 271 EDGRSCRDHDECAMYGTCSQTCMNTYGSFRCSCTDGFSLQPNRRSCIAKHEPGESPAALL 330
Query: 120 ISNRHSILVA-----------DLEEKGK-----DHRAQDI-------------------- 143
I +I++ L+ G +H+ + +
Sbjct: 331 IGGSDNIIITALNGSRLQTLKQLDSNGTHGLDFNHKEESVCWVTSSESSGQLRCARMKKA 390
Query: 144 ----------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
V L V+ L +DW+ G+ Y++D +RI VC++ G + + ++
Sbjct: 391 SGFTKEQEVKTVQNLHDVDQLTFDWLTGNFYFVDQASDRIFVCNQLGDTCVTVVDLDLLN 450
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
P+ + LDP G LF+TD+G ++ER MDG+NR+ ++ K+ P + LD+ + VY
Sbjct: 451 PKAIALDPLMGM--LFFTDYGNVAKLERCNMDGTNRTRLVDYKVERPTAVALDLVKKLVY 508
Query: 254 FADSKLDFID 263
+AD+ LD+I+
Sbjct: 509 WADAYLDYIE 518
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 181/425 (42%), Gaps = 98/425 (23%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAIN--------------------HSAA 116
G CSQ+C T + + C+C GY L D +C+ +N H+
Sbjct: 1971 GGCSQLCLPTSENTRTCACTIGYNLRNDRLSCEGLNSFLMYSFHEGIRGIALDPNDHTET 2030
Query: 117 FLIISNRHSILVAD--------------LEEKGKDHRAQ----DIVVSGLDLVEGLAYDW 158
+ IS + D L + R Q DI+ +G++ VEG+A DW
Sbjct: 2031 LMPISGTLFAVGVDFHAGNDTVYWTDMGLNRISRAKRDQTWREDIITTGINRVEGIAVDW 2090
Query: 159 IGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPR 218
I G++YW D LN IE+ NG R V+ + + QPR + + P G +LFWT+WG+NP
Sbjct: 2091 IAGNLYWTDHGLNLIEIARLNGLYRSVVISEGLDQPRAIAVHPQRG--YLFWTEWGKNPC 2148
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEI--------- 269
I R +DGS++ T++S+ I WPNG+T+D R+Y+ D++ D I+ +LE
Sbjct: 2149 IGRARLDGSDQVTLVSSGIAWPNGITIDYEENRLYWCDARTDKIERINLETGEGREIVLS 2208
Query: 270 KTNVNYSTIF---RKLYWIDEG----------------------GNGVPLK----IGKAN 300
NV+ ++ +YW D G GV LK K
Sbjct: 2209 AANVDLFSVAVFGAYIYWSDRAHANGSIRRGFKSDATDAVTMRSGLGVNLKDVKVFNKGR 2268
Query: 301 MDGSNASILVSG---QLYEALA-----LDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
G+N +G QL L +G L C R+ + + E ++ I
Sbjct: 2269 EKGTNPCARSNGGCQQLCFHLGSGRRTCSCAHGYLAEDGFACQRYGGYLLYSERTILKSI 2328
Query: 353 GM-DGSNRSTIIS---TKIYWPNGLTLDIATR-------RVYFADSKLDFIDFCNYDGTG 401
+ D S+ ++ + Y+ N + L R R++F+D I N D +G
Sbjct: 2329 HLSDESDLNSPLQPFENPDYFKNVIALAFDYRQESSPHNRIFFSDIHFGNIQMINDDWSG 2388
Query: 402 RQQVI 406
RQ ++
Sbjct: 2389 RQVIV 2393
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 131/326 (40%), Gaps = 69/326 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSN--TCHPTPLGALCTCPP 57
+C+ CD DC +G + C + C + C C+ T A+C C P
Sbjct: 3901 KCIPAQLQCDLFDDCGDGGSDEQDCKASSNGDICGKRMNPCGEDAVCNHTNTNAICHCKP 3960
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY---------------VLE 102
G + S C+++NEC G CS CTNTKGSY C+C++ Y VL
Sbjct: 3961 GFQRNLRSRKCEEINECLYFGTCSHYCTNTKGSYKCTCDKNYKDMNGSCIAKGPEDRVLY 4020
Query: 103 YDNHT-----------------------------CKAINHSAAFLIIS--NRHSILVADL 131
N T A+ H F+ + N + D+
Sbjct: 4021 IANDTEIRSFVYPFNQSHGHKVHARIEENARIIGMDALFHQQKFIWATQFNPGGLFYKDI 4080
Query: 132 EEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD-SRLN--------------RIEVC 176
+ + I+ ++ DW+ G+IYW D SR++ I V
Sbjct: 4081 LNRSQTKTNVGIICPDFRRPRDVSADWVTGNIYWTDHSRMHWFSYYTAHWTKLRYSINVG 4140
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 236
G N L D +P + ++P G ++W+ G++ IE MDGS R ++ K
Sbjct: 4141 QLKGPNCTRLITDIAGEPYAIAVNPVKGM--MYWSVIGDHSHIEESAMDGSMRRVLLDKK 4198
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D ++RVY+AD++L I
Sbjct: 4199 LRRPTGLAIDYFSQRVYWADAELSVI 4224
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 110/244 (45%), Gaps = 61/244 (25%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL-------II------ 120
+PG CS +C + + S C C G+ L D +CK + II
Sbjct: 610 KPGGCSHICLLSGSYKSRSCRCRTGFRLGNDGQSCKKPKNDLFLFYGKGRPGIIRGLDMN 669
Query: 121 ---SNRHSILVADL-EEKGKDHRAQD-------------------------IVVSGLDLV 151
S+ H + + DL + D+ A+ I+ LD V
Sbjct: 670 VKSSDEHMVPIEDLVNPRALDYHAETGNIYFADTTSFLIGRQKVDGSNRETILKDDLDNV 729
Query: 152 EGLAYDWIGGHIYWLDS------RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
EG++ DWIG ++YW + + R+E E R L + +++ PR +++DP
Sbjct: 730 EGISVDWIGNNLYWTNDGYRKTISVARLERASET---RKTLLEGDMSHPRAIVVDPL--N 784
Query: 206 RWLFWTDWGENP------RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
W++WTDW E+ RIE+ MDGSNR +++ + WPNGLTLD T +Y+ D+
Sbjct: 785 SWMYWTDWEEDEVNDSIGRIEKAWMDGSNRKIFVTSNMLWPNGLTLDHGTSTMYWCDAYY 844
Query: 260 DFID 263
D I+
Sbjct: 845 DHIE 848
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E P I R + G+N IIST ++ PNGLT+D ++YF+D L
Sbjct: 2455 ECQNLMFWTNWNEQRPSIMRSTLAGNNMKVIISTDVFTPNGLTIDHKAEKLYFSDGSLGK 2514
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 2515 IERCEYDGSHRHVIV 2529
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 125/279 (44%), Gaps = 28/279 (10%)
Query: 69 QDMNECEQ---PGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
Q N CE G CS +C + + CSC L +N +C A+ FL+ R
Sbjct: 1654 QASNPCEGNDGRGPCSHLCLIDYNRTASCSCPHLMKLSLNNRSCVALK---KFLLYVRRS 1710
Query: 125 SILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
I D++ + + V +D V + YD + IYW D + I+ NGT
Sbjct: 1711 EIRGVDIDNPYMNVMTA-LTVPDIDDVTVVDYDALEERIYWADVKTQTIKRAFINGTGLQ 1769
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ +I RG+ +D +R ++W + E +I +DGS ++++I I P L
Sbjct: 1770 TVISGDIQNCRGLAIDWL--SRNMYWLSSENEETQINVARLDGSLKTSVIH-GIDKPKCL 1826
Query: 244 TLDIATRRVYFAD------SKLDFIDCKSLE--IKTNVNYSTIFR--KLYWIDEGGNGVP 293
T+ A ++Y+ D + +D + K L K V S F K+YWI NG
Sbjct: 1827 TVHPAKGKIYWTDGNTINVANMDGSNRKVLHQNQKEPVGLSIDFPAGKMYWI-SSANGT- 1884
Query: 294 LKIGKANMDGSNASILVSGQ--LYEALALDLENGMLYYS 330
I + N+DGS ++ S + L +A AL + G L+++
Sbjct: 1885 --INRCNLDGSGFEVIESMKRDLTKATALAVMGGKLWWA 1921
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 142/360 (39%), Gaps = 72/360 (20%)
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
V+ G+D + L G IYW D N I V + +G+NR VL + N +P G+ +D
Sbjct: 1816 VIHGIDKPKCLTVHPAKGKIYWTDG--NTINVANMDGSNRKVLHQ-NQKEPVGLSIDFPA 1872
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI- 262
G ++W N I R +DGS I S K L + ++++AD L +
Sbjct: 1873 GK--MYWIS-SANGTINRCNLDGSGFEVIESMKRDLTKATALAVMGGKLWWADDDLAQLG 1929
Query: 263 -----DCKSLEIKTNVNYSTIFRKLYWID--EGGNGVPLKIG------------------ 297
D ++ + N + K+Y D +G N L G
Sbjct: 1930 TVAKRDGRNPVVLRNKTSGLVHMKVYDRDGQKGRNACQLNNGGCSQLCLPTSENTRTCAC 1989
Query: 298 ---------KANMDGSNASILVS-GQLYEALALDLENGMLYYSTLKCTRW---------- 337
+ + +G N+ ++ S + +ALD + + T +
Sbjct: 1990 TIGYNLRNDRLSCEGLNSFLMYSFHEGIRGIALDPNDHTETLMPISGTLFAVGVDFHAGN 2049
Query: 338 --LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
++WTD G N RI R D + R II+T I G+ +D +Y+ D L+ I+
Sbjct: 2050 DTVYWTDMGLN-RISRAKRDQTWREDIITTGINRVEGIAVDWIAGNLYWTDHGLNLIEIA 2108
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKTPLFCITR 455
+G R VI L + A+A+ + G L+++ E+ K P CI R
Sbjct: 2109 RLNGLYRSVVISEGL-----------DQPRAIAVHPQRGYLFWT----EWGKNP--CIGR 2151
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYD--WIGGHIYWLDSRLNRIEVCDENGT-- 181
I +++ D + ++V + VEGLAY W + + D++
Sbjct: 2374 IHFGNIQMINDDWSGRQVIVENVGSVEGLAYHRAWDTIYWTSSTTSSISRYTVDQSRQGA 2433
Query: 182 --NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIY 238
+ V+ P + LD +FWT+W E P I R + G+N IIST ++
Sbjct: 2434 FGRQAVVTMSEDDHPHVLALDEC--QNLMFWTNWNEQRPSIMRSTLAGNNMKVIISTDVF 2491
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGLT+D ++YF+D L I+
Sbjct: 2492 TPNGLTIDHKAEKLYFSDGSLGKIE 2516
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 87/217 (40%), Gaps = 31/217 (14%)
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
+ +IYW + T I +R + + L + ++ + + R +YW+
Sbjct: 1744 LEERIYWADVKTQTI--KRAFINGTGLQTVISGDIQNCRGLAIDWLSRNMYWLSSENEET 1801
Query: 293 PLKIGKANMDGSNASILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
+ + A +DGS + ++ G + L + G +Y W + I
Sbjct: 1802 QINV--ARLDGSLKTSVIHGIDKPKCLTVHPAKGKIY--------------WTDGNTINV 1845
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
MDGSNR ++ P GL++D ++Y+ S I+ CN DG+G +++
Sbjct: 1846 ANMDGSNRK-VLHQNQKEPVGLSIDFPAGKMYWISSANGTINRCNLDGSG------FEVI 1898
Query: 412 VEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKT 448
DL A AL + G L+++ + L T
Sbjct: 1899 ESMKRDL-----TKATALAVMGGKLWWADDDLAQLGT 1930
>gi|330369974|gb|AEC12210.1| vitellogenin receptor isoform 2 [Thunnus thynnus]
Length = 844
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 148/301 (49%), Gaps = 46/301 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ ++KVC+ DCP+ +DE C++ EC G CS+ C +G C C PG L
Sbjct: 327 ECIEMSKVCNKARDCPDWSDEPIKECNINECLLNNGGCSHICKDMAIGFECDCTPGLQLI 386
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D+NEC PG CSQ+C N KG Y C C+ GY ++ CKA+ LI +N
Sbjct: 387 -DHKTCGDINECLNPGICSQICINLKGGYKCECHNGYQMDPTTGVCKAVGKEPC-LIFTN 444
Query: 123 RHSILVADLE-----------------------------------------EKGKDHRAQ 141
R I LE +K D
Sbjct: 445 RRDIRRLGLERKEYTQIVEQQRNMVALDADFGQQMIFWADLGQKAIYSTVLDKRGDVGTH 504
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+ V+ + G+A DWI ++YW D I V + NGT + VL ++ +P + +DP
Sbjct: 505 NKVIDNVQTPVGIAVDWIYKNLYWSDLSTKTISVANFNGTKQKVLFNRSLKEPAAIAVDP 564
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+W+DWGE +IE+ GM+G +R +++T I WPNG+TLD+ R+Y+ DSKL
Sbjct: 565 LSG--FLYWSDWGEPAKIEKSGMNGVDRQVLVATDIQWPNGITLDLIKGRLYWVDSKLHM 622
Query: 262 I 262
+
Sbjct: 623 V 623
>gi|350540068|ref|NP_001233752.1| low-density lipoprotein receptor precursor [Cricetulus griseus]
gi|191132|gb|AAA51449.1| low density lipoprotein receptor [Cricetulus griseus]
Length = 854
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 157/301 (52%), Gaps = 46/301 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ L KVCD DC + +DE C EC G CS+ C +G C CP G L
Sbjct: 289 ECIALDKVCDSMRDCRDWSDEPIKDCRTNECLDNNGGCSHVCKDLKIGYECLCPNGFQLV 348
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC++P C Q+C N +GSY C C G+ ++ CKA+ S A+L+ +N
Sbjct: 349 -DQHRCEDIDECQEPDTCDQLCVNLEGSYKCECRAGFHMDPHTRVCKAVG-SVAYLLFTN 406
Query: 123 RHSI------------LVADLE-------------------EKGKDHRA---------QD 142
RH + L+ +L+ +GK + A D
Sbjct: 407 RHEVRKMTLDRSEYTSLIPNLKNVVALDTEVANNRIYWSDLSQGKIYSALMDQAPTLSYD 466
Query: 143 IVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++SG L +GLA DWI G+IYW DS + V D G R L ++ ++PR +++DP
Sbjct: 467 TIISGDLQAPDGLAVDWIHGNIYWTDSVPGSVSVADTKGIRRRTLFQEKGSRPRDIVVDP 526
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++WTDWG +I++ G++G + ++++ I WPNG+TLDI + R+Y+ DSKL
Sbjct: 527 VHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTEDIQWPNGITLDIPSGRLYWVDSKLHS 584
Query: 262 I 262
I
Sbjct: 585 I 585
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 164/411 (39%), Gaps = 69/411 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC--KHKFGLCSNTCHPTPLGALC-TCPPGEIL 61
C++ ++ CD + DC + +DE ++ +C +KF S C L +C +
Sbjct: 249 CIHGSRQCDREYDCKDMSDELGCINVTQCDGPNKFKCHSGEC--IALDKVCDSMRDCRDW 306
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
S++ + NEC + G CS +C + K Y C C G+ L D H C+ I+
Sbjct: 307 SDEPIKDCRTNECLDNNGGCSHVCKDLKIGYECLCPNGFQL-VDQHRCEDIDECQEPDTC 365
Query: 121 SNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG 180
L + + + D V +AY + + + R D +
Sbjct: 366 DQLCVNLEGSYKCECRAGFHMDPHTRVCKAVGSVAY------LLFTNRHEVRKMTLDRSE 419
Query: 181 TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS---NRSTIISTKI 237
++ N+ + LD ++W+D + +I MD + + TIIS +
Sbjct: 420 YTSLIPNLKNV-----VALDTEVANNRIYWSDLSQG-KIYSALMDQAPTLSYDTIISGDL 473
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P+GL +D I +YW D VP +
Sbjct: 474 QAPDGLAVDW------------------------------IHGNIYWTD----SVPGSVS 499
Query: 298 KANMDGSNASILVS--GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A+ G L G + +D +G +Y WTDWG +I++ G++
Sbjct: 500 VADTKGIRRRTLFQEKGSRPRDIVVDPVHGFMY-----------WTDWGTPAKIKKGGLN 548
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
G + ++++ I WPNG+TLDI + R+Y+ DSKL I + +G R+ ++
Sbjct: 549 GVDIYSLVTEDIQWPNGITLDIPSGRLYWVDSKLHSISSIDVNGGNRKTIL 599
>gi|281337384|gb|EFB12968.1| hypothetical protein PANDA_010297 [Ailuropoda melanoleuca]
Length = 741
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 155/302 (51%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 185 ECITLDKVCNSIRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKMGYECLCPKGFRLV 244
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC+ P CSQ+C N +GSY C C EG+ L+ CKA+ + A+L +N
Sbjct: 245 -DQRRCEDIDECQDPDVCSQLCVNLEGSYKCDCEEGFQLDPHTKACKAVGN-IAYLFFTN 302
Query: 123 RH--------------------SILVADLE---------------------EKGKDHRAQ 141
RH +++ D+E ++ +
Sbjct: 303 RHEVRKMTLDRSEYTSLIPNLKNVVALDMEVARNRIYWSDLSQRKIYSTHIDRATSFSSY 362
Query: 142 DIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D V+S L +GLA DWI +IYW DS L + V D G R L K+ ++PR +++D
Sbjct: 363 DTVISEDLQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFKEKGSKPRAIVVD 422
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD++ R+Y+ DSKL
Sbjct: 423 PVHG--FMYWTDWGTPAKIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLH 480
Query: 261 FI 262
I
Sbjct: 481 SI 482
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD--NITQPRGMMLD 200
+V + G+ D GG +YW+DS+L+ I D NG NR ++ +D + P + +
Sbjct: 452 LVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSIDVNGGNRKIVLEDKKKLAHPFSLAIF 511
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 512 EDK----IFWTD 519
>gi|291237320|ref|XP_002738583.1| PREDICTED: lipophorin receptor-like [Saccoglossus kowalevskii]
Length = 869
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 151/303 (49%), Gaps = 49/303 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG--CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV +K CD DC + +DE C L ECKH+ G CS TC P+ C C G LS
Sbjct: 317 CVEHSKTCDRNNDCGDWSDEPSPQICVLNECKHQNGGCSQTCIDLPIDYYCECASGFRLS 376
Query: 63 NDSVTCQDMNEC-EQPGYCSQM-CTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
D+ TC+D++EC E P C + C N G + C+C + YV+ Y + C+ A L+
Sbjct: 377 WDNKTCKDIDECGENPDICGHLFCFNDDGGFHCACPKEYVI-YPDGVCRLKERDAVLLVA 435
Query: 121 SNRH-------------SILVADLEEK----------------------------GKDHR 139
+ +H IL DL+ KD
Sbjct: 436 NRKHIVQIDLSDEFNSKEILFTDLQSATALDVDVRKRKIYWTDIGAETINGASLDNKDGN 495
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
I+ + + + +GL DW+ G+IYW D+ N + V E+G R L ++ +PR + +
Sbjct: 496 FDVILDTNISIADGLVVDWVAGNIYWTDTGRNTVNVVSEDGQFRKTLFNHDVDEPRALAV 555
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +W+DWG N RIER GMDGSNR TI+S + WPNG+++D +R++Y+ D+KL
Sbjct: 556 DPQEGL--FYWSDWGSN-RIERAGMDGSNRQTILSDDLGWPNGISIDYISRKLYWVDAKL 612
Query: 260 DFI 262
I
Sbjct: 613 HTI 615
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 119/465 (25%), Positives = 187/465 (40%), Gaps = 133/465 (28%)
Query: 5 CVNLTKVCDGKTDCPNGADE----GPGCDLAECKHKFGLC------------------SN 42
C+++ VCDG DC + +DE GC + K G+C +
Sbjct: 237 CIHMAWVCDGDPDCMDDSDERDCENDGCTDEQFTCKSGVCIPKEAECDGKMDCYDASDES 296
Query: 43 TCHPTP---LGALCTCPPGEILSNDSVTCQDMNEC------------------EQPGYCS 81
C P P + TC G + + S TC N+C Q G CS
Sbjct: 297 DCTPAPVCDINTHFTCDNGACVEH-SKTCDRNNDCGDWSDEPSPQICVLNECKHQNGGCS 355
Query: 82 QMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQ 141
Q C + Y C C G+ L +DN TCK D++E G++
Sbjct: 356 QTCIDLPIDYYCECASGFRLSWDNKTCK--------------------DIDECGENPD-- 393
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
I GH++ + ++G K+ + P G+
Sbjct: 394 -----------------ICGHLFCFN----------DDGGFHCACPKEYVIYPDGVCRLK 426
Query: 202 SPGTRWLFWTDWGENPRIERIGM-DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
L I +I + D N I+ T + L +D+ R++Y+ D +
Sbjct: 427 ERDAVLLV----ANRKHIVQIDLSDEFNSKEILFTDLQSATALDVDVRKRKIYWTDIGAE 482
Query: 261 FIDCKSLEIK---------TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSN 305
I+ SL+ K TN++ + + +YW D G N V + + DG
Sbjct: 483 TINGASLDNKDGNFDVILDTNISIADGLVVDWVAGNIYWTDTGRNTVNV----VSEDGQF 538
Query: 306 ASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L + + E ALA+D + G+ Y W+DWG N RIER GMDGSNR TI+
Sbjct: 539 RKTLFNHDVDEPRALAVDPQEGLFY-----------WSDWGSN-RIERAGMDGSNRQTIL 586
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
S + WPNG+++D +R++Y+ D+KL I + + D G+Q++ L+
Sbjct: 587 SDDLGWPNGISIDYISRKLYWVDAKLHTISYSDMD--GQQRITLL 629
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
E L DL++ ++ R ++WTD G E + N I+ T I +GL
Sbjct: 453 EILFTDLQSATALDVDVR-KRKIYWTDIGAETINGASLDNKDGNFDVILDTNISIADGLV 511
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENG 434
+D +Y+ D+ + ++ + DG R+ + F +D+ + ALA+D + G
Sbjct: 512 VDWVAGNIYWTDTGRNTVNVVSEDGQFRKTL--------FNHDV---DEPRALAVDPQEG 560
Query: 435 MLYYSTEGAEFLK 447
+ Y+S G+ ++
Sbjct: 561 LFYWSDWGSNRIE 573
>gi|74136375|ref|NP_001028078.1| low-density lipoprotein receptor precursor [Macaca mulatta]
gi|40231914|gb|AAR83313.1| low density lipoprotein receptor [Macaca mulatta]
Length = 853
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 155/302 (51%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 281 ECISLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHICNDLKIGYECLCPDGFQLV 340
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
C+D++EC+ P CSQ+C N +GSY C C EG+ L+ CKA+ S A+LI +N
Sbjct: 341 AQR-RCEDIDECQDPDTCSQLCVNLEGSYKCQCEEGFQLDPHTKACKAVG-SIAYLIFTN 398
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L ++ +
Sbjct: 399 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMIYSTQLDRAHSVSSY 458
Query: 142 DIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D V+S L +GLA DWI +IYW DS L + V D G R L ++N ++PR +++D
Sbjct: 459 DTVISRDLQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVD 518
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD + R+Y+ DSKL
Sbjct: 519 PVHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIEWPNGITLDFPSGRLYWVDSKLH 576
Query: 261 FI 262
I
Sbjct: 577 SI 578
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLAKDNITQPRGMMLD 200
+V ++ G+ D+ G +YW+DS+L+ I D NG NR I+ K+ + P + +
Sbjct: 548 LVTENIEWPNGITLDFPSGRLYWVDSKLHSISSIDVNGGNRKTILEDKERLAHPFSLAIF 607
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 608 EDK----VFWTD 615
>gi|402904329|ref|XP_003914999.1| PREDICTED: low-density lipoprotein receptor [Papio anubis]
Length = 819
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 166/337 (49%), Gaps = 55/337 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 288 ECISLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHICNDLKIGYECLCPDGFQLV 347
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
C+D++EC+ P CSQ+C N +GSY C C EG+ L+ CKA+ S A+LI +N
Sbjct: 348 AQR-RCEDIDECQDPDTCSQLCVNLEGSYKCQCEEGFQLDPHTKACKAVG-SIAYLIFTN 405
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L ++ +
Sbjct: 406 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMIYSTQLDRAHSVSSY 465
Query: 142 DIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D V+S L +GLA DWI +IYW DS L + V D G R L ++N ++PR +++D
Sbjct: 466 DTVISRDLQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVD 525
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD + R+Y+ DSKL
Sbjct: 526 PVHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDFPSGRLYWVDSKLH 583
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
I +++N + RK DE P +
Sbjct: 584 SI--------SSINVNGGNRKTVLEDEKRLAHPFSLA 612
>gi|383409945|gb|AFH28186.1| low-density lipoprotein receptor isoform 1 precursor [Macaca
mulatta]
Length = 860
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 155/302 (51%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 288 ECISLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHICNDLKIGYECLCPDGFQLV 347
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
C+D++EC+ P CSQ+C N +GSY C C EG+ L+ CKA+ S A+LI +N
Sbjct: 348 AQR-RCEDIDECQDPDTCSQLCVNLEGSYKCQCEEGFQLDPHTKACKAVG-SIAYLIFTN 405
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L ++ +
Sbjct: 406 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMIYSTQLDRAHSVSSY 465
Query: 142 DIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D V+S L +GLA DWI +IYW DS L + V D G R L ++N ++PR +++D
Sbjct: 466 DTVISRDLQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVD 525
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD + R+Y+ DSKL
Sbjct: 526 PVHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIEWPNGITLDFPSGRLYWVDSKLH 583
Query: 261 FI 262
I
Sbjct: 584 SI 585
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLAKDNITQPRGMMLD 200
+V ++ G+ D+ G +YW+DS+L+ I D NG NR ++ K+ + P + +
Sbjct: 555 LVTENIEWPNGITLDFPSGRLYWVDSKLHSISSIDVNGGNRKTVLEDKERLAHPFSLAIF 614
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 615 EDK----VFWTD 622
>gi|330369976|gb|AEC12211.1| vitellogenin receptor isoform 1 [Thunnus thynnus]
Length = 864
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 148/301 (49%), Gaps = 46/301 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ ++KVC+ DCP+ +DE C++ EC G CS+ C +G C C PG L
Sbjct: 327 ECIEMSKVCNKARDCPDWSDEPIKECNINECLLNNGGCSHICKDMAIGFECDCTPGLQLI 386
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D+NEC PG CSQ+C N KG Y C C+ GY ++ CKA+ LI +N
Sbjct: 387 -DHKTCGDINECLNPGICSQICINLKGGYKCECHNGYQMDPTTGVCKAVGKEPC-LIFTN 444
Query: 123 RHSILVADLE-----------------------------------------EKGKDHRAQ 141
R I LE +K D
Sbjct: 445 RRDIRRLGLERKEYTQIVEQQRNMVALDADFGQQMIFWADLGQKAIYSTVLDKRGDVGTH 504
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+ V+ + G+A DWI ++YW D I V + NGT + VL ++ +P + +DP
Sbjct: 505 NKVIDNVQTPVGIAVDWIYKNLYWSDLSTKTISVANFNGTKQKVLFNRSLKEPAAIAVDP 564
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+W+DWGE +IE+ GM+G +R +++T I WPNG+TLD+ R+Y+ DSKL
Sbjct: 565 LSG--FLYWSDWGEPAKIEKSGMNGVDRQVLVATDIQWPNGITLDLIKGRLYWVDSKLHM 622
Query: 262 I 262
+
Sbjct: 623 V 623
>gi|242021136|ref|XP_002431002.1| low-density lipoprotein receptor, putative [Pediculus humanus
corporis]
gi|212516226|gb|EEB18264.1| low-density lipoprotein receptor, putative [Pediculus humanus
corporis]
Length = 2101
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/444 (29%), Positives = 186/444 (41%), Gaps = 98/444 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGA-LCTCPPGEILSN 63
C+ VCDGK DCP G DE C + C C G C+C G ILS+
Sbjct: 591 CIGRKHVCDGKKDCPKGEDER-NCPKKKKCDDDSKCQQLCVVLSNGRDACSCEAGFILSS 649
Query: 64 DSVTCQDMNEC--EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D+ TC D++EC E CSQ+C NT GS+ C C +GYVL D TCKAI LI +
Sbjct: 650 DNHTCDDIDECKFEYDPVCSQICNNTIGSFTCLCRKGYVLRPDGRTCKAIGDPPT-LIFA 708
Query: 122 NRHSILVADL--------------------------------------EEKGKDHRAQDI 143
NR I L K D+
Sbjct: 709 NRIDIRQVSLNNLRYTAILKGLQNAIAIDYHYNKGWIYWSDVSMDVIKRAKVNGTEKSDV 768
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ GL+ G+A DWI +YW DS R+EV +G +R V+A +++ +PR +++ P
Sbjct: 769 IKWGLESPGGVAIDWIHDLLYWTDSGTRRVEVATLDGKHRSVIASNDLDKPRAIVV--HP 826
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +FWTDWG P+IE MDGSNR +II+ ++WPNGL LD A R+Y+ D+K I+
Sbjct: 827 GLAVVFWTDWGPKPKIEVSEMDGSNRKSIITEGVFWPNGLALDYAIDRLYWTDAKHHAIE 886
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
A DGS +V+ L A+ L
Sbjct: 887 ----------------------------------SAKFDGSERRKIVTKGLPHPFAITLF 912
Query: 324 NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 383
+Y WTDW I D I+ T +++P +DI + +
Sbjct: 913 EEAIY-----------WTDW-HTKSIASANKDTGMGYKIVHTGLHFP----MDIHS---F 953
Query: 384 FADSKLDFIDFCNYDGTGRQQVIL 407
+ + F + C + G + L
Sbjct: 954 HSQRQPSFTNHCGNNTGGCSHLCL 977
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 134/294 (45%), Gaps = 63/294 (21%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK---------------------------- 109
G CS +C TK SY C+C G L D +C
Sbjct: 970 GGCSHLCLPTKSSYRCACPLGLHLHKDKKSCTDTPEKLLIFARNKDIRLRQLGQGKEVGI 1029
Query: 110 --------AINHSAAFLIISNRHSILVADLEEKGKDHRA---------QDIVVSG-LDLV 151
+ + A S++++I D+E HR Q++V+S L+
Sbjct: 1030 IDMVIPLDQVRSAVALAFDSDKNTIYWTDVES----HRISKSFLNGSNQEVVISSNLESP 1085
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
GLA DW+ +YW D+ NRIE+ + NG+ R +L D + +PR ++++P G +++W+
Sbjct: 1086 SGLAIDWVTKKLYWADAGTNRIELSNLNGSMRALLIWDGLDKPRDIVVEPIGG--YMYWS 1143
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKLD--- 260
DWG+ P+IER GM+GSNR + S + WPNGL +D R+Y+ D S+LD
Sbjct: 1144 DWGKTPKIERAGMNGSNRKILFSKDLIWPNGLAIDHEKSRIYWVDGGTKAIEYSRLDGSG 1203
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
+S E++ + + +YW D N + + +G+ +SG +
Sbjct: 1204 RTTLRSTEVRHPFGLTLFGKNIYWTDWETNSIHMADKNTGKNGAILRDRISGLM 1257
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 115/261 (44%), Gaps = 56/261 (21%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG-- 135
G CS +C + C+C G VL+ D+ TC + + FL+ + R ++ L+ +
Sbjct: 1583 GGCSHLCLRKPEGFACACPTGIVLQEDSKTCNHL--PSTFLLFATRSKLVRVSLDTEELW 1640
Query: 136 ---------------------------------------KDHRAQDIVVS-GLDLVEGLA 155
K+ I++ L +G+A
Sbjct: 1641 DVTLPILDIQNSISVDFHWNKQIIFYSDVNLDVIRGVNMKNLSENKIIIKENLTTPDGIA 1700
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DW+ ++YW D+ +EV +G R V+ + +PR + + PG +L+WTDWG+
Sbjct: 1701 VDWLSENLYWTDTGRKVLEVSKIDGKCRKVIFNKGLDEPRAITV--FPGRGYLYWTDWGD 1758
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNY 275
+PRIER MDGS R II + +PNGL +D ++Y+AD+ D I+ L + V
Sbjct: 1759 SPRIERSFMDGSQRRVIIGADLGFPNGLAVDYTALKLYWADALKDRIEFSDLHGRNRVQL 1818
Query: 276 S---------TIFRK-LYWID 286
TIF + +YW D
Sbjct: 1819 VPAATHPFGLTIFEEHIYWTD 1839
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 74/126 (58%), Gaps = 2/126 (1%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I++ GLD +G+ D G IYW D+ N IE+C+ +GTNR VL ++ PR + L
Sbjct: 1384 IIIDGLDTADGIVVDSTGRKIYWTDAGRNSIEICELDGTNRKVLIWSDLENPRAITLHYH 1443
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +FW+DWG+ RIE+ MDG NR +I+ + WPNGL +D R+Y+ D K I
Sbjct: 1444 HGL--MFWSDWGKKARIEQADMDGKNRKVLIADDLDWPNGLAIDRPGGRLYWNDGKRKTI 1501
Query: 263 DCKSLE 268
+ LE
Sbjct: 1502 ESSDLE 1507
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI 296
IYW + T + R +D I L+ + + RK+YW D G N + +
Sbjct: 1361 IYWTD--TTEDVIMRASRDGYNVDRIIIDGLDTADGIVVDSTGRKIYWTDAGRNSIEI-- 1416
Query: 297 GKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG 356
+DG+N +L+ L A+ L Y+ L +FW+DWG+ RIE+ MDG
Sbjct: 1417 --CELDGTNRKVLIWSDLENPRAITLH----YHHGL-----MFWSDWGKKARIEQADMDG 1465
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
NR +I+ + WPNGL +D R+Y+ D K I+ + +G GR+ ++
Sbjct: 1466 KNRKVLIADDLDWPNGLAIDRPGGRLYWNDGKRKTIESSDLEGRGRKIIV 1515
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 146/346 (42%), Gaps = 86/346 (24%)
Query: 123 RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDE-NGT 181
R +I +DLE +G+ I+V + GL +G H+YW D + + D+ NG+
Sbjct: 1498 RKTIESSDLEGRGRK-----IIVREVPHPYGLVI--VGTHMYWTDWKTQSVHRADKRNGS 1550
Query: 182 NRIVLAK-------------DNITQ-------------------------PRGMMLDPS- 202
+ V+ K +NI + P G++L
Sbjct: 1551 DSQVIRKGLEGLMDIRSVQAENIAENACGSDNGGCSHLCLRKPEGFACACPTGIVLQEDS 1610
Query: 203 ------PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR--VYF 254
P T LF T ++ R+ +D + + N +++D + +++
Sbjct: 1611 KTCNHLPSTFLLFAT----RSKLVRVSLDTEELWDVTLPILDIQNSISVDFHWNKQIIFY 1666
Query: 255 ADSKLDFI---DCKSLE-----IKTNVNYST------IFRKLYWIDEGGNGVPLKIGKAN 300
+D LD I + K+L IK N+ + LYW D G + + +
Sbjct: 1667 SDVNLDVIRGVNMKNLSENKIIIKENLTTPDGIAVDWLSENLYWTDTGRKVLEV----SK 1722
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DG ++ + L E A+ + G Y L+WTDWG++PRIER MDGS R
Sbjct: 1723 IDGKCRKVIFNKGLDEPRAITVFPGRGY---------LYWTDWGDSPRIERSFMDGSQRR 1773
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
II + +PNGL +D ++Y+AD+ D I+F + G R Q++
Sbjct: 1774 VIIGADLGFPNGLAVDYTALKLYWADALKDRIEFSDLHGRNRVQLV 1819
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 18/111 (16%)
Query: 129 ADLEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
A +E+ D + + ++++ LD GLA D GG +YW D + IE D G R ++
Sbjct: 1456 ARIEQADMDGKNRKVLIADDLDWPNGLAIDRPGGRLYWNDGKRKTIESSDLEGRGRKIIV 1515
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW------------GENPRIERIGMDG 226
++ + P G+++ GT ++WTDW G + ++ R G++G
Sbjct: 1516 RE-VPHPYGLVI---VGTH-MYWTDWKTQSVHRADKRNGSDSQVIRKGLEG 1561
>gi|194763038|ref|XP_001963641.1| GF20503 [Drosophila ananassae]
gi|190629300|gb|EDV44717.1| GF20503 [Drosophila ananassae]
Length = 876
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/333 (33%), Positives = 164/333 (49%), Gaps = 54/333 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGA-LCTCPPGEILSN 63
CV+ +CDG DCP+G DE +C C C T LG C C G ++
Sbjct: 325 CVHQKHICDGYRDCPSGEDELNCPKQQKCLDPMQ-CEQLCIKTSLGIDECACRLGYLMDQ 383
Query: 64 DSVTCQDMNECE--QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII- 120
+ + C D++EC+ CSQ C NT GS+ICSC GY+L D +CKA+ + L+
Sbjct: 384 NRINCTDIDECQYLTSPVCSQKCRNTIGSFICSCETGYILRPDLRSCKALGGAMTLLVAN 443
Query: 121 ----------SNRHSILVADLE---------EKG-----------------KDHRAQDIV 144
+NR+S +V L KG R +DI+
Sbjct: 444 RWDIRRVALSNNRYSAVVKGLHNAIALDFHYRKGLIFWSDVSTDIIKMVFINGTRVRDII 503
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
GL+ G+A DWI ++W DS R+EV + G R V+A ++ +PR +++ PG
Sbjct: 504 KWGLESPGGVAIDWIHDLLFWTDSGTRRVEVSNFQGNFRTVIASCDLDKPRAVVV--HPG 561
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
FW+DWG P+IER MDGS R IIS + WPNGL +D +R++Y+AD+K I+
Sbjct: 562 EALTFWSDWGPYPKIERAYMDGSERKIIISKGVTWPNGLAIDYPSRKIYWADAKQHAIEF 621
Query: 265 KSLE-------IKTNVNYS---TIFR-KLYWID 286
+L+ + T++ + TIF +YW D
Sbjct: 622 SNLDGSDRNKILSTHLPHPFALTIFEDTMYWTD 654
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 173/452 (38%), Gaps = 116/452 (25%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGP---GCDLAE--------------CKHKFGLCSNTCHP 46
RC+ T +CDG DC +G DE CDL + C H+ +C
Sbjct: 279 RCILRTWLCDGYPDCTSGEDEVECHLQCDLGQFLCPTIQNETNHKICVHQKHICD----- 333
Query: 47 TPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-GSYICSCNEGYVLEYDN 105
CP GE D + C +C P C Q+C T G C+C GY+++ +
Sbjct: 334 ----GYRDCPSGE----DELNCPKQQKCLDPMQCEQLCIKTSLGIDECACRLGYLMDQNR 385
Query: 106 HTC----------------KAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLD 149
C K N +F+ IL DL R+ + +
Sbjct: 386 INCTDIDECQYLTSPVCSQKCRNTIGSFICSCETGYILRPDL-------RSCKALGGAMT 438
Query: 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
L+ +D + R+ + N + +V N + LD +F
Sbjct: 439 LLVANRWD------------IRRVAL-SNNRYSAVVKGLHN-----AIALDFHYRKGLIF 480
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEI 269
W+D + I+ + ++G+ II + P G+ +D
Sbjct: 481 WSDVSTDI-IKMVFINGTRVRDIIKWGLESPGGVAIDW---------------------- 517
Query: 270 KTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
I L+W D G V + +N G+ +++ S L + A+ + G
Sbjct: 518 --------IHDLLFWTDSGTRRVEV----SNFQGNFRTVIASCDLDKPRAVVVHPGEAL- 564
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
FW+DWG P+IER MDGS R IIS + WPNGL +D +R++Y+AD+K
Sbjct: 565 --------TFWSDWGPYPKIERAYMDGSERKIIISKGVTWPNGLAIDYPSRKIYWADAKQ 616
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
I+F N DG+ R +++ L F + D
Sbjct: 617 HAIEFSNLDGSDRNKILSTHLPHPFALTIFED 648
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 82/198 (41%), Gaps = 31/198 (15%)
Query: 19 PNGADEGPGCDLAECKHKFGL---CSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC- 74
P+ AD P K + GL CS+ C P C+CP G L +D TC+ +
Sbjct: 693 PDYADRCP-------KDRRGLRGGCSHLCLPNKTSRRCSCPIGLSLKDDGKTCKKTGDKL 745
Query: 75 -----EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
+ Q+ N + N ++ DN + H+ A S+ I
Sbjct: 746 ILVARRKDIRLRQLKNNEEDPS----NVDMIIPLDN-----LKHAVALDWSSDTDFIYWT 796
Query: 130 DLEEK--GKDH----RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR 183
D+E K H Q +V S L GLA DWI +YW D NRIEV NG R
Sbjct: 797 DVERSTINKAHLNGSEQQRVVHSNLISPVGLALDWITDKLYWTDPSTNRIEVATTNGKLR 856
Query: 184 IVLAKDNITQPRGMMLDP 201
+L + + +PR +++ P
Sbjct: 857 TLLIWEKLYKPRDIVVSP 874
>gi|195132737|ref|XP_002010799.1| GI21507 [Drosophila mojavensis]
gi|193907587|gb|EDW06454.1| GI21507 [Drosophila mojavensis]
Length = 1968
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 151/309 (48%), Gaps = 53/309 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLA-ECKHKFGLCSNTCHPTPL-GALCTCPPGEILS 62
C++L +VCDG+ +C +G+DE C + C K TCH P G C CP G L
Sbjct: 254 CLSLAQVCDGQPNCSDGSDESESCHVKPNCTSKQCPPGATCHMMPTSGPECYCPKGFRLL 313
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEY-DNHTCKAIN----HSAA 116
C+D+NEC EQ CSQ C NT G Y C+C+ GY L+ +N TC A + +
Sbjct: 314 KFKDKCEDINECQEQQDLCSQRCENTSGGYRCTCDAGYELDATNNRTCHATSIGGEKQSP 373
Query: 117 FLIISNRHSILVADLEEKGKDHR------------------------------------- 139
L+ + + +++ L + K+
Sbjct: 374 LLLYTTQMTVMGMHLAPQSKERHHVITVATNLTKVIGVAFDGEHIYWTNIQNEAESIVRA 433
Query: 140 ------AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
A+ ++ SGLD E LA DW+ +IY+ D+ + I VC +G N +VL +++ Q
Sbjct: 434 HADGSMAEILLTSGLDAPEDLAVDWLTHNIYFSDNVMRHIAVCSNDGLNCVVLVTEDVHQ 493
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
PR + L P G +FWTDWG P I R MDG++ I+S I+WPNG+ LD+ R+Y
Sbjct: 494 PRSLALWPQRGQ--MFWTDWGNRPMIARASMDGAHSKPIVSDNIHWPNGIALDMHQERIY 551
Query: 254 FADSKLDFI 262
+ D+KL I
Sbjct: 552 WVDAKLGSI 560
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 154/358 (43%), Gaps = 70/358 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV++++VC+G DC NG DEGP C A + LC + C TP GA+CTC G L +D
Sbjct: 1344 CVDMSRVCNGFDDCTNGNDEGPQCGSACMR---PLCQHKCQATPAGAVCTCLEGYRLQSD 1400
Query: 65 SVTCQDMNEC-----EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI 119
+C D++EC +QP C+Q+C NT GSY C C+ ++L D +CK+I A L
Sbjct: 1401 QRSCVDIDECAVSPEQQP--CAQLCENTPGSYQCQCHADFMLRQDRSSCKSIQSGATLLF 1458
Query: 120 ISNRHSILVADLEEK----GKDHRAQDIVVSGLDLVEGLAYDWIGGH----IYWLDSRLN 171
S V +L E+ A D +SG D+ + IY +D R
Sbjct: 1459 TSYNE---VRNLSEQPVMLSVAWSANDSRISGFDVDMRRKLGYFSSEEENIIYRVDMR-- 1513
Query: 172 RIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRST 231
+R LA ++ P M ++ + G ++ G P ++I + S R+
Sbjct: 1514 ----------DRTRLAALSLRTPSKMAVEWTTGNVYVI---SGSAP--QKISV-CSFRAK 1557
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+ ++ +L K+L + ++ +L+++
Sbjct: 1558 MCGQILHMTARFSL-------------------KALAVDAHLG------RLFYVAIRSET 1592
Query: 292 VPLKIGK---ANMDGSNASILVSGQ--LYEALALDLENGMLYYSTLKCTRWLFWTDWG 344
L I + A +DGS +L+ ALA D MLY+ L +R L +G
Sbjct: 1593 FGLHISQIHMARLDGSRRELLLGKHRSYVTALATDPHQQMLYFVDLH-SRTLEMISYG 1649
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 141/379 (37%), Gaps = 75/379 (19%)
Query: 27 GCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTC--------------QDMN 72
C++A C H L P+ G C CP G LS D C Q +
Sbjct: 638 ACEMARCSHLCLLAE----PSAGGHTCACPEGMTLSTDGRRCSQTEKKQRLFIGLRQALL 693
Query: 73 ECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE 132
E E + + T S+ C Y+ E A N L I++ + +
Sbjct: 694 EIEHTSFGRHVVT---ASHNLPC---YISEM------AFNSINGTLFIADNIQRAIFEYV 741
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNI 191
+ R +V L + GLA+D + ++YW D + IE+ G +V
Sbjct: 742 PHMNEQRLVTLVYRNLGNISGLAFDHLAHNLYWSDMDRHVIELLSLRTGQRALVRFFAGD 801
Query: 192 TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
+P G+ + P+ G ++ + I+R+ + G T +
Sbjct: 802 ERPIGLTVMPAEGFMFVALKAR-RHTHIDRLALSGKGAQTHV------------------ 842
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
F D D +IK V+Y T R ++W D + +I +N ++ L
Sbjct: 843 --FED------DLGDDDIKFAVDYET--RTMFWSDSDTS----RISYSNYRQTHGQSL-R 887
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWT---DWGENPRIE-----RIGMDGSNRSTII 363
G+ AL L + L++S L T ++WT + G N RIE +G DG+ +
Sbjct: 888 GKFRRPYALALVDQDLFWSELG-TPAIYWTHKNNLGPNKRIEIDASPHMGRDGAAAAATA 946
Query: 364 STKIYWPNGLTLDIATRRV 382
P + L A+RR+
Sbjct: 947 FLSHMLPVRIPL-AASRRL 964
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 10/108 (9%)
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
++ IV + G+A D IYW+D++L I+ +G++R + + P G+
Sbjct: 526 HSKPIVSDNIHWPNGIALDMHQERIYWVDAKLGSIQSVHPDGSSRQTVLDGMLKHPYGLA 585
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNR------STIISTKIYWP 240
+ L+W+DWG G + TI + IY P
Sbjct: 586 IFED----HLYWSDWGTRSIHTCHKFSGKDHRVLARDRTIYAVHIYHP 629
>gi|449514470|ref|XP_002194044.2| PREDICTED: very low-density lipoprotein receptor [Taeniopygia
guttata]
Length = 893
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 171/339 (50%), Gaps = 61/339 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C+++ KVC+ + DC + +DE C++ EC G CS+ C +G C CP G E+L
Sbjct: 347 ECIDINKVCNQQRDCKDWSDEPLKECNINECLLNNGGCSHICRDLVIGYECDCPAGFELL 406
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 407 --DRRTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 463
Query: 122 NRHSI----------------------LVADLEEKG---KDHRAQDIVVSGLDLVE---- 152
NR I L AD+ E+ D + I + +D +
Sbjct: 464 NRRDIRKIGLERKEYIQLVEQLRNSIALDADIAEQKLYWADFSQKAIFSASIDTRDKVGT 523
Query: 153 ------------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
G+A DW+ +IYW DS I V +GT R VL + +P + +D
Sbjct: 524 HIRILDNIHSPAGIAVDWVYKNIYWSDSTAKTISVASLDGTKRKVLFLSELREPASIAVD 583
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++W+DWGE +IE+ GM+G +R +++T+I WPNG+ LD+ R+Y+ DSKL
Sbjct: 584 PLSG--FMYWSDWGEPAKIEKAGMNGFDRQQLVTTEIQWPNGIALDLVKSRLYWLDSKLH 641
Query: 261 FIDC-------KSLEIKTNVNYS-----TIFR-KLYWID 286
+ + + +K+++ TIF ++YWID
Sbjct: 642 MLSSVDLNGQDRRIVLKSHMFLPHPLALTIFEDRVYWID 680
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 92/183 (50%), Gaps = 33/183 (18%)
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST----------------IFRKLYWI 285
L DIA +++Y+AD I S++ + V +++ +YW
Sbjct: 490 ALDADIAEQKLYWADFSQKAIFSASIDTRDKVGTHIRILDNIHSPAGIAVDWVYKNIYWS 549
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDW 343
D + + A++DG+ +L +L E ++A+D +G +Y W+DW
Sbjct: 550 DSTAKTISV----ASLDGTKRKVLFLSELREPASIAVDPLSGFMY-----------WSDW 594
Query: 344 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403
GE +IE+ GM+G +R +++T+I WPNG+ LD+ R+Y+ DSKL + + +G R+
Sbjct: 595 GEPAKIEKAGMNGFDRQQLVTTEIQWPNGIALDLVKSRLYWLDSKLHMLSSVDLNGQDRR 654
Query: 404 QVI 406
V+
Sbjct: 655 IVL 657
>gi|442622882|ref|NP_001260800.1| LDL receptor protein 1, isoform D [Drosophila melanogaster]
gi|440214196|gb|AGB93333.1| LDL receptor protein 1, isoform D [Drosophila melanogaster]
Length = 4747
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 171/373 (45%), Gaps = 67/373 (17%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
+ +CV + ++CDGK DC + DEG C C CS+ CH TP G +C+CP L
Sbjct: 1252 SKQCVTVDQLCDGKNDCEDTTDEGFLCADKLCDRGHE-CSHRCHNTPEGYICSCPDHLYL 1310
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+ C + C+ CSQ+C ++ Y C C +G+ L +D TCK+ ++I +
Sbjct: 1311 QPNGKRCSMQHACDHWDTCSQVCESSGKGYDCRCLDGFDLGFDRFTCKSTAPDEPYVIFT 1370
Query: 122 NRHSILVADLEE-------------------------------------------KGKDH 138
NR I +L+ G+
Sbjct: 1371 NRQDIKGINLKTLNVGNFYSSLRNIIALDFLYNNESNVEIYWTDVIDDKIYRGHLVGESL 1430
Query: 139 RAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
R + V+ SGL EGLA DW+G ++YW+DS L++IEV NG+ R L N+ PR +
Sbjct: 1431 RNVEAVIHSGLSTTEGLAVDWVGKNLYWIDSNLDQIEVAKLNGSFRRTLIAGNMESPRAI 1490
Query: 198 MLDPSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIST---KIYWPNGLTLDIATRRVY 253
LDP G LFWTDW +N PRIER M G R I ++ WPNGLTLD +RVY
Sbjct: 1491 ALDPREGL--LFWTDWDDNSPRIERASMSGDGRRMISTSWQLSAGWPNGLTLDYTQKRVY 1548
Query: 254 FADSKLDFIDC------------KSLEIKTNVNYSTIFRK-LYWIDEGGNGVPLKIGKAN 300
+ D+K D I ++ EI ++ ++F +YW D V I
Sbjct: 1549 WVDAKSDSISSTMYDGSEHHVVLRNKEILSHPFAISVFENYVYWTDWRTTSV---IRANK 1605
Query: 301 MDGSNASILVSGQ 313
+GS+ +L Q
Sbjct: 1606 WNGSDVQVLQRTQ 1618
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 191/412 (46%), Gaps = 87/412 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EILSN 63
C++ +CD + DC + +DE C++ EC +C + C +G C C PG ++L
Sbjct: 3034 CIHADLLCDRRNDCADFSDE-ELCNVNECLIP-DICEHECEDKVVGYQCHCRPGYKVLPK 3091
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
C D++EC++ CSQ C NT GSY C C +GY L D+HTCKA ++ + LI SNR
Sbjct: 3092 SPHLCTDIDECDEQQPCSQTCINTYGSYKCLCAKGYAL-VDHHTCKATSNVSMELIFSNR 3150
Query: 124 HSILVADLEEKG---------------------------------------KDHRAQDIV 144
+ I D+ G K+++ Q +
Sbjct: 3151 YYIRQVDMTGNGSILINELSNAVALDYDWDSQCLYWSDVTSTVGTIKRYCPKENKTQTLH 3210
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ L +GLA DW+ ++YW D L+ IEV +G R VL + + +PRG+ L P
Sbjct: 3211 QAMLKNPDGLAVDWVAKNLYWCDKGLDTIEVSQLDGKYRKVLINEYLREPRGIALHPY-- 3268
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
+ +FW+DWG++P I + GMDGSN II + WPN LT+ T+++++ D++ D I
Sbjct: 3269 QQHIFWSDWGDSPHIGKAGMDGSNPKMIIRDGLGWPNALTISFETQQLFWGDAREDTISV 3328
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
L+ GN L + + SI L+ A+ +
Sbjct: 3329 SDLD--------------------GNHTRLLLAR--------SINPLLNLHHIFAIAVWE 3360
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGM-DGSNRSTIISTKIYWPNGLTL 375
G +Y W+DW E IE + +G N +T+I+T I+ P L +
Sbjct: 3361 GHIY-----------WSDW-ETKSIEYCSIFNGQNCTTLITT-IHRPMDLRV 3399
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 102/452 (22%), Positives = 170/452 (37%), Gaps = 93/452 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ + CDGK DC +G+DE + C H G GA C ++L +
Sbjct: 2991 CIFKNQTCDGKPDCGDGSDETS----SLCAHTRGCNGTDDFRCKNGA---CIHADLLCDR 3043
Query: 65 SVTCQD--------MNECEQPGYCSQMCTNTKGSYICSCNEGY-VLEYDNHTCKAINH-- 113
C D +NEC P C C + Y C C GY VL H C I+
Sbjct: 3044 RNDCADFSDEELCNVNECLIPDICEHECEDKVVGYQCHCRPGYKVLPKSPHLCTDIDECD 3103
Query: 114 -----SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS 168
S + + L A H + ++L+ Y
Sbjct: 3104 EQQPCSQTCINTYGSYKCLCAKGYALVDHHTCKATSNVSMELIFSNRY------------ 3151
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP-RIERIGMDGS 227
I D G I++ + + LD ++ L+W+D I+R +
Sbjct: 3152 ---YIRQVDMTGNGSILINE----LSNAVALDYDWDSQCLYWSDVTSTVGTIKRYCPKEN 3204
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDE 287
T+ + P+GL +D + + LYW D+
Sbjct: 3205 KTQTLHQAMLKNPDGLAVDW------------------------------VAKNLYWCDK 3234
Query: 288 GGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
G + + + + +DG +L++ L E + L + +FW+DWG++P
Sbjct: 3235 GLDTIEV----SQLDGKYRKVLINEYLREPRGIALHPYQQH---------IFWSDWGDSP 3281
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
I + GMDGSN II + WPN LT+ T+++++ D++ D I + DG +
Sbjct: 3282 HIGKAGMDGSNPKMIIRDGLGWPNALTISFETQQLFWGDAREDTISVSDLDGNHTRL--- 3338
Query: 408 IDLMVEFTNDLMGDNGVPALALDLENGMLYYS 439
L+ N L+ + + A+A + G +Y+S
Sbjct: 3339 --LLARSINPLLNLHHIFAIA--VWEGHIYWS 3366
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 120/321 (37%), Gaps = 106/321 (33%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK--- 134
G C Q+C S +C+C L D ++C+ + F SN SI + D +K
Sbjct: 2269 GACEQLCLFNGTSAVCACAHSR-LASDGYSCEPYENFLLFSYRSNIESIHMTDHADKNWP 2327
Query: 135 -----------------------------------------GKDHRAQDIVVSGLDLVEG 153
G HR +++ VEG
Sbjct: 2328 VQMISNTSLMRNVIAITYNYEEQLVYYSDVQLSTINQVHFNGTGHR---VLLEQQQRVEG 2384
Query: 154 LAYDWIGGHIYWLDSRLNRI---------EVCDENGTN-RIVLAKDNITQPRGMMLDPSP 203
LAYD + ++W + I E D+N + + VL+ +PRG+ ++P
Sbjct: 2385 LAYDIVNEQLFWTSNNNATIRSVELRHLSEHADQNQVHVKKVLSLREDDKPRGIAVEPCL 2444
Query: 204 GTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G ++WT+W E +P I+R + G II T I PN LTLD+ +++Y+AD++LD
Sbjct: 2445 GM--IYWTNWNEGSPCIQRSYLTGYGTEVIIKTDIKMPNALTLDLEQQKLYWADARLD-- 2500
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
KI + N DGSN +L A A
Sbjct: 2501 --------------------------------KIERTNYDGSNRVVLAHSTPKHAFA--- 2525
Query: 323 ENGMLYYSTLKCTRWLFWTDW 343
M Y L LFWTDW
Sbjct: 2526 ---MAVYGDL-----LFWTDW 2538
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL-SN 63
C+ L++ CDG+ DC N + CD CS C TP GA C CP ++ S+
Sbjct: 183 CLELSRFCDGRWDCDNDELQ---CDKQNAACAALNCSFNCKLTPQGARCYCPKDQVPESS 239
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN 112
+S C D +EC +PG C Q+C NT GSY CSC GY N C+AIN
Sbjct: 240 NSTRCVDYDECSEPGTCDQVCRNTPGSYECSCVSGYAKTKGNR-CRAIN 287
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 123/327 (37%), Gaps = 83/327 (25%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG--CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV + +CDG DC DE L +C+H C N C
Sbjct: 3825 CVRNSALCDGINDCGENEDESDAVCAALPKCRHDQFQCEND----------DCISKAFRC 3874
Query: 63 NDSVTCQDMNE---CEQP----GYCSQMCTNTK-GSYICSCNEGYVLEYD-NHTCKAINH 113
+ C D ++ C+ P G CSQ+C K G Y C C +GY + N TC A
Sbjct: 3875 DGQYNCVDGSDEMNCQPPVCGFGSCSQICIEKKAGHYNCKCADGYHKGPEKNATCLASGP 3934
Query: 114 SAAFLIISNR-------------------------------------------------- 123
L+ S +
Sbjct: 3935 DQILLLASEQEFRFILPAKQEGTTVVGFFQTDSLKIDVFDILIRPKDTLLFWIDSHHGKV 3994
Query: 124 HSILVADLEEKGKDHRAQDIV-------VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
H++ +A +G R + + + LD + LA DWI +Y +DSR N+I
Sbjct: 3995 HTMKIATPHVEGTGVRVRRDLKELTAFNIPELDDPKSLAVDWISQRVYIIDSRHNQILAT 4054
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 236
D G I L + P ++L+P +R + W+ EN I +DGSN+ +++
Sbjct: 4055 DIEGKKYISLVSTGMN-PTDIVLEPE--SRIMIWSTL-EN-GILVASLDGSNKKSLVERD 4109
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFID 263
+ WP L++D T R+Y+AD + I+
Sbjct: 4110 VGWPISLSMDYPTGRLYWADYRKGTIE 4136
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 153/373 (41%), Gaps = 78/373 (20%)
Query: 136 KDHRAQDIVVSGLDLVE--------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
+D ++ ++ L+LV G+A DW+ G+IYW D++ N IEV +G++R V+
Sbjct: 2052 RDGTQRETILEALNLVGYKQQDWLGGIAIDWVAGNIYWSDTKRNIIEVARLDGSHRYVVV 2111
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS-TKIYWPNG-LTL 245
N+ +P + +DP G LF+ I R+G+DGS +++ T+ W G L L
Sbjct: 2112 S-NLEKPTALAVDPLQGL--LFYV---TQQHIGRVGLDGSQPFVLVNQTRANWAVGSLVL 2165
Query: 246 DIATRRVYFADSKLDFI-------DCKSLEIKTNVNYSTIFRK----LYWIDEGGNGVPL 294
DI +VY+ + D + + + + ++N K LYW + N +
Sbjct: 2166 DIEATKVYWCERYPDALMKVDYDGNLREQLLNESLNNPVALAKMGDYLYWAENKYNEGII 2225
Query: 295 KIGK-ANMDGSNASILVSGQLYEALAL---DLENGM--LYYSTLKCTRWLFW--TDWGEN 346
++ AN+ S + L + L+ G +S C + + T
Sbjct: 2226 RVAPLANLSQSKVVLQTEQDAIRDLKIYSKHLQRGSNPCAHSNGACEQLCLFNGTSAVCA 2285
Query: 347 PRIERIGMDG------------SNRSTIISTKIY------WPN-------------GLTL 375
R+ DG S RS I S + WP +T
Sbjct: 2286 CAHSRLASDGYSCEPYENFLLFSYRSNIESIHMTDHADKNWPVQMISNTSLMRNVIAITY 2345
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGM 435
+ + VY++D +L I+ +++GTG + ++ VE LA D+ N
Sbjct: 2346 NYEEQLVYYSDVQLSTINQVHFNGTGHRVLLEQQQRVE------------GLAYDIVNEQ 2393
Query: 436 LYYSTEGAEFLKT 448
L++++ +++
Sbjct: 2394 LFWTSNNNATIRS 2406
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 22/196 (11%)
Query: 242 GLTLDIATRRVYFADSKLDFIDCKS---------LEIKTNVN---YSTIFRKLYWIDEGG 289
+T + + VY++D +L I+ LE + V Y + +L+W
Sbjct: 2342 AITYNYEEQLVYYSDVQLSTINQVHFNGTGHRVLLEQQQRVEGLAYDIVNEQLFWTSNNN 2401
Query: 290 ---NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE- 345
V L+ + D + + + L+L ++ + C ++WT+W E
Sbjct: 2402 ATIRSVELRHLSEHADQNQVHV------KKVLSLREDDKPRGIAVEPCLGMIYWTNWNEG 2455
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+P I+R + G II T I PN LTLD+ +++Y+AD++LD I+ NYDG+ R +
Sbjct: 2456 SPCIQRSYLTGYGTEVIIKTDIKMPNALTLDLEQQKLYWADARLDKIERTNYDGSNRVVL 2515
Query: 406 ILIDLMVEFTNDLMGD 421
F + GD
Sbjct: 2516 AHSTPKHAFAMAVYGD 2531
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 16/178 (8%)
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNITQPRGMMLDPSP 203
VS L DW+ G+ Y + + +C T R++L + + + LDP+
Sbjct: 391 VSPQQFFTELRLDWLSGNWYLVSEDDGLVYLCTNAMTYCRVILQQ--VDPLSSLDLDPTK 448
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G ++F+TDW P + R +DGSNR+ +++ ++Y P+ +TLD+A VY+ D D ++
Sbjct: 449 G--FMFYTDW--TPSLSRSLLDGSNRTVLVTDQVYHPSSVTLDLANELVYWIDIYKDEVN 504
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
E + N T+ R L + VPLK A N+ L + +ALD
Sbjct: 505 RVDYEGR---NRWTLKRPL------DSPVPLKTIHAVEVFENSIYLAAWMDTAIVALD 553
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 59/234 (25%)
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPNGLTLDIATR 250
+D T L+W D E I R+ DG+ R TI+ + W G+ +D
Sbjct: 2027 FIDYLANTDTLYWGD-NELGSISRVKRDGTQRETILEALNLVGYKQQDWLGGIAIDWVAG 2085
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
+Y++D+K + I+ A +DGS+ ++V
Sbjct: 2086 NIYWSDTKRNIIE----------------------------------VARLDGSHRYVVV 2111
Query: 311 SG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS-TKIY 368
S + ALA+D G+L+Y T + I R+G+DGS +++ T+
Sbjct: 2112 SNLEKPTALAVDPLQGLLFYVTQQ--------------HIGRVGLDGSQPFVLVNQTRAN 2157
Query: 369 WPNG-LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
W G L LDI +VY+ + D + +YDG R+Q++ L MGD
Sbjct: 2158 WAVGSLVLDIEATKVYWCERYPDALMKVDYDGNLREQLLNESLNNPVALAKMGD 2211
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 90/233 (38%), Gaps = 58/233 (24%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL V +A+DWI H+YW + +++V ++++ T M L+
Sbjct: 721 LLAQGLKRVHAVAFDWINDHLYWTSHK--KMQVAPLRNLSKVLTFN---TDCDAMSLELD 775
Query: 203 PGTRWLFWTDWGEN---PRIERIGMDGSNRSTII----STKIYWPNGLTLDIATRRVYFA 255
P T L+W+ W I MDG+++ + S + WP L +D T+ +Y+
Sbjct: 776 PTTGLLYWSQWESQSCEAGIYSSWMDGTHKELLAKGTSSMPMQWPRSLDVDRRTKELYWC 835
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D +L I+ + R +DG+ +L +
Sbjct: 836 DIRLSTIE--------------LMR--------------------LDGTGREVLFKSDQF 861
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY 368
++ NG++Y W D +N I R +N S+ S+ ++
Sbjct: 862 HPYSIVQNNGLIY-----------WAD-NKNSTILRFHAHQANLSSTFSSTVH 902
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
++F+TDW P + R +DGSNR+ +++ ++Y P+ +TLD+A VY+ D D ++ +
Sbjct: 450 FMFYTDW--TPSLSRSLLDGSNRTVLVTDQVYHPSSVTLDLANELVYWIDIYKDEVNRVD 507
Query: 397 YDGTGR 402
Y+G R
Sbjct: 508 YEGRNR 513
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 21/140 (15%)
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
+FW+D +N I G+ II+T I P G +D R +YF+ + I C L
Sbjct: 1723 IFWSDIQQN-EISSAGISNGLIEPIINTNIEKPYGFAVDWIARNMYFSSGQ---IKCNIL 1778
Query: 268 EIKTNVNYSTIFR----------------KLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+++I K+YWI +G ++ ++N+DGS+ S++
Sbjct: 1779 ASNLKGEFASIIHEDLNMVDSIVLDPANGKMYWIHSASDGSMSQLEQSNLDGSSRSLIYQ 1838
Query: 312 GQ-LYEALALDLENGMLYYS 330
+ ++L +D ++ LYY+
Sbjct: 1839 HENNLQSLTMDFDSQRLYYA 1858
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 46/226 (20%)
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEG----GNGVP-LKIGKANMDGSNASILVSG-QLYEAL 318
K+L I NV +F + D G GNG P I +++GS + +L G + A+
Sbjct: 675 KTLAIDVNVRGKAVFYVV--ADSGASPFGNGEPSCSIRSQSLNGSVSRLLAQGLKRVHAV 732
Query: 319 ALDLENGMLYYSTLK-----------------------------CTRWLFWTDWGEN--- 346
A D N LY+++ K T L+W+ W
Sbjct: 733 AFDWINDHLYWTSHKKMQVAPLRNLSKVLTFNTDCDAMSLELDPTTGLLYWSQWESQSCE 792
Query: 347 PRIERIGMDGSNRSTII----STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
I MDG+++ + S + WP L +D T+ +Y+ D +L I+ DGTGR
Sbjct: 793 AGIYSSWMDGTHKELLAKGTSSMPMQWPRSLDVDRRTKELYWCDIRLSTIELMRLDGTGR 852
Query: 403 QQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKT 448
+ + D ++ ++ +NG+ A + + +L + A T
Sbjct: 853 EVLFKSDQFHPYS--IVQNNGLIYWADNKNSTILRFHAHQANLSST 896
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 109/277 (39%), Gaps = 29/277 (10%)
Query: 78 GYCSQMCTNTKG-SYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G C Q+C T ++C C GY +E +N T F I + + D E+
Sbjct: 1951 GGCQQLCLATSSIDHVCRCALGYDVEPNNPTGCVPRAEFIFYSIDVLQGVEMIDPSEQFD 2010
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLAKDNITQPR 195
+ +S + + Y +YW D+ L I +GT R +L N+ +
Sbjct: 2011 TPSPALVPISRVSSASFIDYLANTDTLYWGDNELGSISRVKRDGTQRETILEALNLVGYK 2070
Query: 196 ------GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
G+ +D G ++W+D N IE +DGS+R ++S + P L +D
Sbjct: 2071 QQDWLGGIAIDWVAGN--IYWSDTKRN-IIEVARLDGSHRYVVVSN-LEKPTALAVDPLQ 2126
Query: 250 RRVYFADSK------LDFIDCKSLEIKTNVNYST-------IFRKLYWIDEGGNGVPLKI 296
+++ + LD L +T N++ K+YW + P +
Sbjct: 2127 GLLFYVTQQHIGRVGLDGSQPFVLVNQTRANWAVGSLVLDIEATKVYWCER----YPDAL 2182
Query: 297 GKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
K + DG+ L++ L +AL LY++ K
Sbjct: 2183 MKVDYDGNLREQLLNESLNNPVALAKMGDYLYWAENK 2219
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 123/306 (40%), Gaps = 51/306 (16%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLDPSPGTRWLFW 210
GL D+ +YW+D++ + I +G+ V+ ++ ++ P + S +++W
Sbjct: 1537 GLTLDYTQKRVYWVDAKSDSISSTMYDGSEHHVVLRNKEILSHPFAI----SVFENYVYW 1592
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS-KLDFIDCKSLEI 269
TDW I +GS+ + T+ P G+ + ++R+ + + + C L +
Sbjct: 1593 TDWRTTSVIRANKWNGSDVQVLQRTQSQ-PFGIQVLHSSRQPWDRNPCGENNGGCSHLCL 1651
Query: 270 KTNV-NYSTIFRKLYWIDEGG--NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGM 326
+ + + +D N VP N +L+ + E +DL
Sbjct: 1652 LSGRGTFKCECPHVMRLDPANERNCVP-----------NEQVLLFVMVDEIRGIDLHQPN 1700
Query: 327 LYYSTLKCTRW-------------LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
+ T+ R +FW+D +N I G+ II+T I P G
Sbjct: 1701 --HHTIPTIRQSPRRIDFLVDESRIFWSDIQQN-EISSAGISNGLIEPIINTNIEKPYGF 1757
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD-NGVPALALDLE 432
+D R +YF+ ++ CN ++ +L EF + + D N V ++ LD
Sbjct: 1758 AVDWIARNMYFSSGQIK----CN--------ILASNLKGEFASIIHEDLNMVDSIVLDPA 1805
Query: 433 NGMLYY 438
NG +Y+
Sbjct: 1806 NGKMYW 1811
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 20/114 (17%)
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPNGLTLDIATRRVYFADS 387
T L+W D E I R+ DG+ R TI+ + W G+ +D +Y++D+
Sbjct: 2034 TDTLYWGD-NELGSISRVKRDGTQRETILEALNLVGYKQQDWLGGIAIDWVAGNIYWSDT 2092
Query: 388 KLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTE 441
K + I+ DG+ R +++ + + T ALA+D G+L+Y T+
Sbjct: 2093 KRNIIEVARLDGSHR--YVVVSNLEKPT----------ALAVDPLQGLLFYVTQ 2134
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 135/323 (41%), Gaps = 61/323 (18%)
Query: 70 DMNEC-EQPGYCSQMCT-NTKGSYICSC----------------NEGYVL---------- 101
D N C E G CS +C + +G++ C C NE +L
Sbjct: 1635 DRNPCGENNGGCSHLCLLSGRGTFKCECPHVMRLDPANERNCVPNEQVLLFVMVDEIRGI 1694
Query: 102 ---EYDNHTCKAINHSAA---FLIISNRHSILVADLEEKG------KDHRAQDIVVSGLD 149
+ ++HT I S FL+ +R I +D+++ + + I+ + ++
Sbjct: 1695 DLHQPNHHTIPTIRQSPRRIDFLVDESR--IFWSDIQQNEISSAGISNGLIEPIINTNIE 1752
Query: 150 LVEGLAYDWIGGHIYWLDSRLN-RIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTR-W 207
G A DWI ++Y+ ++ I + G ++ +D + ++LDP+ G W
Sbjct: 1753 KPYGFAVDWIARNMYFSSGQIKCNILASNLKGEFASIIHED-LNMVDSIVLDPANGKMYW 1811
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA--DSKLDFIDCK 265
+ G ++E+ +DGS+RS I + LT+D ++R+Y+A +S + + D
Sbjct: 1812 IHSASDGSMSQLEQSNLDGSSRSLIYQHENNL-QSLTMDFDSQRLYYAYDNSGIAYYDIP 1870
Query: 266 SLEIK--------TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL-VSGQLYE 316
E + T+++ T++ + E V ++ K SN S L V+ + +
Sbjct: 1871 RNETRKVLVASPITSISSLTVYNGTLYFPENIQSVIMQCEKEAC--SNMSYLRVNTKSIQ 1928
Query: 317 ALALDLENGMLYYSTLKCTRWLF 339
++ + + +T C W +
Sbjct: 1929 SMKMFYADAQTGSNT--CAEWAY 1949
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALC----TCPPG 58
C+ + CDGK+DC +G+DEGP C C+ C ++ P +C CP G
Sbjct: 2854 CIPASWQCDGKSDCEDGSDEGPQCPNRPCRPHLFQCKSSGRCIPQKWVCDGEKDCPSG 2911
>gi|195332400|ref|XP_002032886.1| GM21016 [Drosophila sechellia]
gi|194124856|gb|EDW46899.1| GM21016 [Drosophila sechellia]
Length = 4717
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 173/373 (46%), Gaps = 67/373 (17%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
+ +CV + ++CDGK DC + DEG C C CS+ CH TP G +C+CP L
Sbjct: 1205 SKQCVTVDQLCDGKNDCEDTTDEGFLCADKLCDRGHE-CSHRCHNTPEGYICSCPDHLYL 1263
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+ C + C+ CSQ+C ++ Y C C +G+ L +D TCK+ ++I +
Sbjct: 1264 QPNGKRCSMQHACDHWDTCSQVCESSGKGYDCRCLDGFDLGFDRFTCKSTAPDEPYVIFT 1323
Query: 122 NRHSILVADLEE-------------------------------------------KGKDH 138
NR I +L+ G+
Sbjct: 1324 NRQDIKGINLKTLNVGNFYSSLRNIIALDFLYNNESNVEIYWTDVIDDKIYRGHLVGESL 1383
Query: 139 RAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
R + V+ SGL EGLA DW+G ++YW+DS L++IEV NG+ R L N+ PR +
Sbjct: 1384 RNVEAVIHSGLSTTEGLAVDWVGKNLYWIDSNLDQIEVAKLNGSFRRTLIAGNMESPRAI 1443
Query: 198 MLDPSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIST---KIYWPNGLTLDIATRRVY 253
LDP G LFWTDW +N PRIER M G R I ++ WPNGLTLD +RVY
Sbjct: 1444 ALDPREGL--LFWTDWDDNSPRIERASMSGDGRRMISTSWQLSAGWPNGLTLDYTQKRVY 1501
Query: 254 FADSKLDFIDC------------KSLEIKTNVNYSTIFRK-LYWIDEGGNGVPLKIGKAN 300
+ D+K D I ++ EI ++ ++F +YW D V ++ K N
Sbjct: 1502 WVDAKSDSISSTMYDGSEHHVVLRNKEILSHPFAISVFENYVYWTDWRTTSV-IRANKWN 1560
Query: 301 MDGSNASILVSGQ 313
GS+ +L Q
Sbjct: 1561 --GSDVQVLQRTQ 1571
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/412 (29%), Positives = 191/412 (46%), Gaps = 87/412 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EILSN 63
C++ +CD + DC + +DE C++ EC +C + C +G C C PG ++L
Sbjct: 2992 CIHADLLCDRRNDCADFSDE-ELCNVNECLIP-DICEHECEDKVVGYQCHCRPGYKVLPR 3049
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
C D++EC++ CSQ C NT GSY C C +GY L D+HTCKA ++ + LI SNR
Sbjct: 3050 SPHLCTDIDECDEQQPCSQTCINTYGSYKCLCAKGYAL-VDHHTCKATSNVSMELIFSNR 3108
Query: 124 HSILVADLEEKG---------------------------------------KDHRAQDIV 144
+ I D+ G K+++ Q +
Sbjct: 3109 YYIRQVDMTGNGSILINELSNAVALDYDWDSQCLYWSDVTSTVGTIKRYCPKENKTQTLH 3168
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ L +GLA DW+ ++YW D L+ IEV +G R VL + + +PRG+ L P
Sbjct: 3169 QAMLKNPDGLAVDWVAKNLYWCDKGLDTIEVSQLDGKYRKVLINEYLREPRGIALHPY-- 3226
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
R +FW+DWG++P I + GMDGSN II + WPN LT+ T+++++ D++ D I
Sbjct: 3227 QRHIFWSDWGDSPHIGKAGMDGSNPKMIIRDGLGWPNALTISFETQQLFWGDAREDTISV 3286
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
L+ GN L + + SI L+ A+ +
Sbjct: 3287 SDLD--------------------GNHTRLLLAR--------SINPLLNLHHIFAIAVWE 3318
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGM-DGSNRSTIISTKIYWPNGLTL 375
G +Y W+DW E IE + +G N +T+I+T I+ P L +
Sbjct: 3319 GRIY-----------WSDW-ETKSIEYCSIFNGQNCTTLITT-IHRPMDLRV 3357
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 170/452 (37%), Gaps = 93/452 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ + CDGK DC +G+DE + C H G GA C ++L +
Sbjct: 2949 CIFKNQTCDGKPDCGDGSDETS----SLCAHTRGCNGTDDFRCKNGA---CIHADLLCDR 3001
Query: 65 SVTCQD--------MNECEQPGYCSQMCTNTKGSYICSCNEGY-VLEYDNHTCKAINH-- 113
C D +NEC P C C + Y C C GY VL H C I+
Sbjct: 3002 RNDCADFSDEELCNVNECLIPDICEHECEDKVVGYQCHCRPGYKVLPRSPHLCTDIDECD 3061
Query: 114 -----SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS 168
S + + L A H + ++L+ Y
Sbjct: 3062 EQQPCSQTCINTYGSYKCLCAKGYALVDHHTCKATSNVSMELIFSNRY------------ 3109
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP-RIERIGMDGS 227
I D G I++ + + LD ++ L+W+D I+R +
Sbjct: 3110 ---YIRQVDMTGNGSILINE----LSNAVALDYDWDSQCLYWSDVTSTVGTIKRYCPKEN 3162
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDE 287
T+ + P+GL +D + + LYW D+
Sbjct: 3163 KTQTLHQAMLKNPDGLAVDW------------------------------VAKNLYWCDK 3192
Query: 288 GGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
G + + + + +DG +L++ L E + L R +FW+DWG++P
Sbjct: 3193 GLDTIEV----SQLDGKYRKVLINEYLREPRGIALHPYQ---------RHIFWSDWGDSP 3239
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
I + GMDGSN II + WPN LT+ T+++++ D++ D I + DG +
Sbjct: 3240 HIGKAGMDGSNPKMIIRDGLGWPNALTISFETQQLFWGDAREDTISVSDLDGNHTRL--- 3296
Query: 408 IDLMVEFTNDLMGDNGVPALALDLENGMLYYS 439
L+ N L+ + + A+A + G +Y+S
Sbjct: 3297 --LLARSINPLLNLHHIFAIA--VWEGRIYWS 3324
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 122/318 (38%), Gaps = 100/318 (31%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG-- 135
G C Q+C S +C+C L D ++C+ + F SN SI + D +K
Sbjct: 2227 GACEQLCLFNGTSAVCACAHSR-LASDGYSCEPYENFLLFSYRSNIESIHMTDHSDKNWP 2285
Query: 136 -----------------KDHRAQDIVVSGLDL----------------------VEGLAY 156
++ Q + S + L VEGLAY
Sbjct: 2286 VQMISNTSLMRNVIAITYNYEEQLVYYSDVQLSTINQVHFNGTGQRVLLEQQQRVEGLAY 2345
Query: 157 DWIGGHIYWLDSRLNRI---------EVCDENGTN-RIVLAKDNITQPRGMMLDPSPGTR 206
D + ++W + I E D+N + + VL+ +PRG+ ++P G
Sbjct: 2346 DIVNEQLFWTSNNNATIRSVELRHLSEHADQNQIHVKKVLSLRENDKPRGIAVEPCLGM- 2404
Query: 207 WLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
++WT+W E +P I+R + G II T I PN LTLD+ +++Y+AD++LD
Sbjct: 2405 -IYWTNWNEGSPCIQRSYLTGYGTEVIIKTDIKMPNALTLDLEQQKLYWADARLD----- 2458
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
KI + N DGSN +L A A+ +
Sbjct: 2459 -----------------------------KIERTNYDGSNRVVLAHSTPKHAFAIAV--- 2486
Query: 326 MLYYSTLKCTRWLFWTDW 343
Y L LFWTDW
Sbjct: 2487 ---YGDL-----LFWTDW 2496
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL-SN 63
C+ L++ CDG+ DC N + CD CS C TP GA C CP ++ S+
Sbjct: 137 CLELSRFCDGRWDCDNDELQ---CDKQNAACAALNCSFNCKLTPQGARCYCPKDQVPESS 193
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN 112
+S C D +EC +PG C Q+C NT GSY CSC GY N C+AIN
Sbjct: 194 NSTRCVDYDECSEPGTCDQVCRNTPGSYECSCVSGYAKTKGNR-CRAIN 241
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 122/327 (37%), Gaps = 83/327 (25%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG--CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV + +CDG DC DE L +C+H C N C
Sbjct: 3783 CVRNSALCDGVNDCGENEDESDAVCAALPKCRHDQFQCEND----------DCISKAFRC 3832
Query: 63 NDSVTCQDMNE---CEQP----GYCSQMCTNTK-GSYICSCNEGYVL-EYDNHTCKAINH 113
+ C D ++ C+ P G CSQ+C K G Y C C +GY N TC A
Sbjct: 3833 DGQYNCVDGSDEMNCQPPVCGFGSCSQICIEKKAGHYNCKCADGYHKGPEKNATCLASGP 3892
Query: 114 SAAFLIISNR-------------------------------------------------- 123
L+ S +
Sbjct: 3893 DQILLLASEQEFRFILPAKQEGTTVVGFFQTDSLKIDVFDILIRPKDTLLFWIDSHHGKV 3952
Query: 124 HSILVADLEEKGKDHRAQDIV-------VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
H++ +A +G R + + + LD + LA DWI +Y +DSR N+I
Sbjct: 3953 HTMKIATPHVEGTGVRVRRDLKELTAFNIPELDDPKSLAVDWISQRVYIIDSRHNQILAT 4012
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 236
D G I L + P ++L+P +R + W+ EN I +DGSN+ +++
Sbjct: 4013 DIEGKKYISLVSTGMN-PTDIVLEPE--SRIMIWSTL-EN-GILVASLDGSNKKSLVERD 4067
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFID 263
+ WP L++D T R+Y+AD + I+
Sbjct: 4068 VGWPISLSMDYPTGRLYWADYRKGTIE 4094
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 154/373 (41%), Gaps = 78/373 (20%)
Query: 136 KDHRAQDIVVSGLDLVE--------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
+D ++ ++ L+LV G+A DW+ G+IYW D++ N IEV +G++R V+
Sbjct: 2010 RDGTQRETILEALNLVGYKQQDWLGGIAIDWVAGNIYWSDTKRNIIEVARLDGSHRYVVV 2069
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS-TKIYWPNG-LTL 245
N+ +P + +DP G LF+ I R+G+DGS +++ T+ W G L L
Sbjct: 2070 S-NLEKPTALAVDPLQGL--LFYV---TQQHIGRVGLDGSQPFVLVNQTRANWAVGSLVL 2123
Query: 246 DIATRRVYFADSKLDFI-------DCKSLEIKTNVNYSTIFRK----LYWIDEGGNGVPL 294
DI +VY+ + D + + + + ++N K LYW + N +
Sbjct: 2124 DIEATKVYWCERYPDALMKVDYDGNLREQLLNESLNNPVALAKMGDYLYWAENKYNEGII 2183
Query: 295 KIGK-ANMDGSNASILVSGQLYEALAL---DLENGM--LYYSTLKCTRWLFW--TDWGEN 346
++ AN+ S + L + L+ G +S C + + T
Sbjct: 2184 RVAPLANLSQSKMVLQTEQDAIRDLKIYSKHLQRGSNPCAHSNGACEQLCLFNGTSAVCA 2243
Query: 347 PRIERIGMDG------------SNRSTIISTKIY------WPN-------------GLTL 375
R+ DG S RS I S + WP +T
Sbjct: 2244 CAHSRLASDGYSCEPYENFLLFSYRSNIESIHMTDHSDKNWPVQMISNTSLMRNVIAITY 2303
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGM 435
+ + VY++D +L I+ +++GTG++ ++ VE LA D+ N
Sbjct: 2304 NYEEQLVYYSDVQLSTINQVHFNGTGQRVLLEQQQRVE------------GLAYDIVNEQ 2351
Query: 436 LYYSTEGAEFLKT 448
L++++ +++
Sbjct: 2352 LFWTSNNNATIRS 2364
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 22/177 (12%)
Query: 242 GLTLDIATRRVYFADSKLDFIDCKS---------LEIKTNVN---YSTIFRKLYWIDEGG 289
+T + + VY++D +L I+ LE + V Y + +L+W
Sbjct: 2300 AITYNYEEQLVYYSDVQLSTINQVHFNGTGQRVLLEQQQRVEGLAYDIVNEQLFWTSNNN 2359
Query: 290 ---NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE- 345
V L+ + D + + + L+L + + C ++WT+W E
Sbjct: 2360 ATIRSVELRHLSEHADQNQIHV------KKVLSLRENDKPRGIAVEPCLGMIYWTNWNEG 2413
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
+P I+R + G II T I PN LTLD+ +++Y+AD++LD I+ NYDG+ R
Sbjct: 2414 SPCIQRSYLTGYGTEVIIKTDIKMPNALTLDLEQQKLYWADARLDKIERTNYDGSNR 2470
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 16/178 (8%)
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNITQPRGMMLDPSP 203
VS L DW+ G+ Y + + +C T R++L + + + LDP+
Sbjct: 344 VSPQQFFTELRLDWLSGNWYLVSEDDGLVYLCTNAMTYCRVILQQ--VDPLSSLALDPTK 401
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G ++F+TDW P + R +DGSNR+ +++ ++Y P+ +TLD+A VY+ D D ++
Sbjct: 402 G--FMFYTDW--TPSLSRSLLDGSNRTVLVTDQVYHPSSVTLDLANELVYWIDIYKDEVN 457
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
E + N T+ R L + VPLK A N+ L + +ALD
Sbjct: 458 RVDYEGR---NRWTLKRPL------DSPVPLKTIHAVEVFENSIYLAAWMDASIVALD 506
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 59/234 (25%)
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPNGLTLDIATR 250
+D T L+W D E I R+ DG+ R TI+ + W G+ +D
Sbjct: 1985 FIDYLANTDTLYWGD-NELGSISRVKRDGTQRETILEALNLVGYKQQDWLGGIAIDWVAG 2043
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
+Y++D+K + I+ A +DGS+ ++V
Sbjct: 2044 NIYWSDTKRNIIE----------------------------------VARLDGSHRYVVV 2069
Query: 311 SG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS-TKIY 368
S + ALA+D G+L+Y T + I R+G+DGS +++ T+
Sbjct: 2070 SNLEKPTALAVDPLQGLLFYVTQQ--------------HIGRVGLDGSQPFVLVNQTRAN 2115
Query: 369 WPNG-LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
W G L LDI +VY+ + D + +YDG R+Q++ L MGD
Sbjct: 2116 WAVGSLVLDIEATKVYWCERYPDALMKVDYDGNLREQLLNESLNNPVALAKMGD 2169
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 91/233 (39%), Gaps = 58/233 (24%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL V +A+DW+ H+YW + +++V ++++ T M L+
Sbjct: 674 LLTQGLKRVHAVAFDWVNDHLYWTSHK--KMQVAPLKNLSKVLTFN---TDCDAMSLELD 728
Query: 203 PGTRWLFWTDWGEN---PRIERIGMDGSNRSTII----STKIYWPNGLTLDIATRRVYFA 255
P T L+W+ WG I MDG+++ + + + WP L +D T+ +Y+
Sbjct: 729 PTTGLLYWSQWGSQSCEAGIYSAWMDGTHKELLAKGTSAMPMQWPRSLDVDRRTKELYWC 788
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D +L I+ + R +DG+ +L +
Sbjct: 789 DIRLSTIE--------------LMR--------------------LDGTGREVLFKSDQF 814
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY 368
++ NG++Y W D +N I R +N S+ S+ ++
Sbjct: 815 HPYSIVQNNGLIY-----------WAD-NKNSTILRFHAHQANLSSTFSSTVH 855
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 166/454 (36%), Gaps = 94/454 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLA-ECKHKFGLCSNTCHPTPLGALC---------- 53
C+ + CD K DCP+ +DEG C A +C C + H P LC
Sbjct: 51 CIPMRWKCDSKADCPDMSDEGSECAGAPKCNEGQFRCGVSRHCIPNNWLCDGEFDCGKGD 110
Query: 54 -----TCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTC 108
CP G+ + Q +N G C ++ G + C N+ + N C
Sbjct: 111 TSDELNCPNGDTPKCRAFEGQCLN-----GDCLELSRFCDGRWDCD-NDELQCDKQNAAC 164
Query: 109 KAINHS--------------AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGL 154
A+N S + + +S D +E + + + E
Sbjct: 165 AALNCSFNCKLTPQGARCYCPKDQVPESSNSTRCVDYDECSEPGTCDQVCRNTPGSYECS 224
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ--PRGMMLDPSPGTRWLFWTD 212
+ G+ +R I V T I L++D + G ++ P PG +
Sbjct: 225 C---VSGYAKTKGNRCRAINVPPTEPTTLIFLSRDGVQSVGTNGEVIGP-PGAK------ 274
Query: 213 WGENPRIERIGMDGSNRSTIISTKI-------YWPNGLTL--------DIATRRVYFADS 257
+N ++ GS ++S + W TL ++ R D+
Sbjct: 275 --DNDKVTDKDGVGSEEELLLSQPLRFVHAFEVWHRNRTLCSLLFSWPELQMRCQRVDDA 332
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKL---------YWIDEGGNGVPLKIGKANMDGSNASI 308
++++ +L + V+ F +L Y + E V L N I
Sbjct: 333 RVNW----TLPFSSFVSPQQFFTELRLDWLSGNWYLVSEDDGLVYLC---TNAMTYCRVI 385
Query: 309 LVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY 368
L +LALD G ++Y TDW P + R +DGSNR+ +++ ++Y
Sbjct: 386 LQQVDPLSSLALDPTKGFMFY-----------TDW--TPSLSRSLLDGSNRTVLVTDQVY 432
Query: 369 WPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
P+ +TLD+A VY+ D D ++ +Y+G R
Sbjct: 433 HPSSVTLDLANELVYWIDIYKDEVNRVDYEGRNR 466
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 46/226 (20%)
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEG----GNGVP-LKIGKANMDGSNASILVSG-QLYEAL 318
K+L I NV +F + D G GNG P I +++GS + +L G + A+
Sbjct: 628 KTLAIDVNVRGKVVFYVV--ADSGASPFGNGEPSCSIRSQSLNGSVSRLLTQGLKRVHAV 685
Query: 319 ALDLENGMLYYSTLK-----------------------------CTRWLFWTDWGEN--- 346
A D N LY+++ K T L+W+ WG
Sbjct: 686 AFDWVNDHLYWTSHKKMQVAPLKNLSKVLTFNTDCDAMSLELDPTTGLLYWSQWGSQSCE 745
Query: 347 PRIERIGMDGSNRSTII----STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
I MDG+++ + + + WP L +D T+ +Y+ D +L I+ DGTGR
Sbjct: 746 AGIYSAWMDGTHKELLAKGTSAMPMQWPRSLDVDRRTKELYWCDIRLSTIELMRLDGTGR 805
Query: 403 QQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKT 448
+ + D ++ ++ +NG+ A + + +L + A T
Sbjct: 806 EVLFKSDQFHPYS--IVQNNGLIYWADNKNSTILRFHAHQANLSST 849
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 21/140 (15%)
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
+FW+D +N I G+ II+T I P G +D R +YF+ + I C L
Sbjct: 1681 IFWSDIQQN-EISSAGISNGLIEPIINTNIEKPYGFAVDWIARNMYFSSGQ---IKCNIL 1736
Query: 268 EIKTNVNYSTIFR----------------KLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+ +I K+YWI +G ++ ++N+DGS+ S++
Sbjct: 1737 ASNLKGEFVSIIHEDLNMVDSIVLDPTNGKMYWIHSASDGSMSQLEQSNLDGSSRSLIYQ 1796
Query: 312 GQ-LYEALALDLENGMLYYS 330
+ ++L +D ++ LYY+
Sbjct: 1797 HENNLQSLTMDFDSQRLYYA 1816
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 110/277 (39%), Gaps = 29/277 (10%)
Query: 78 GYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G C Q+C T + ++C C GY +E +N T F I + + D E+
Sbjct: 1909 GGCQQLCLATSSTDHVCRCALGYDVEPNNPTGCVPRAEFIFYSIDVLQGVEMIDPSEQFD 1968
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLAKDNITQPR 195
+ +S + + Y +YW D+ L I +GT R +L N+ +
Sbjct: 1969 TPSPALVPISRVSSASFIDYLANTDTLYWGDNELGSISRVKRDGTQRETILEALNLVGYK 2028
Query: 196 ------GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
G+ +D G ++W+D N IE +DGS+R ++S + P L +D
Sbjct: 2029 QQDWLGGIAIDWVAGN--IYWSDTKRN-IIEVARLDGSHRYVVVSN-LEKPTALAVDPLQ 2084
Query: 250 RRVYFADSK------LDFIDCKSLEIKTNVNYST-------IFRKLYWIDEGGNGVPLKI 296
+++ + LD L +T N++ K+YW + P +
Sbjct: 2085 GLLFYVTQQHIGRVGLDGSQPFVLVNQTRANWAVGSLVLDIEATKVYWCER----YPDAL 2140
Query: 297 GKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
K + DG+ L++ L +AL LY++ K
Sbjct: 2141 MKVDYDGNLREQLLNESLNNPVALAKMGDYLYWAENK 2177
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 114/284 (40%), Gaps = 57/284 (20%)
Query: 70 DMNEC-EQPGYCSQMCT-NTKGSYICSC----------------NEGYVL---------- 101
D N C E G CS +C + +G++ C C NE +L
Sbjct: 1588 DRNPCGENNGGCSHLCLLSGRGTFKCECPHVMRLDPANERNCVPNEQVLLFVMVDEIRGI 1647
Query: 102 ---EYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLD--LVE---- 152
+ ++HT I S L+ R LV + D + +I +G+ L+E
Sbjct: 1648 DLHQPNHHTIPTIRQSPR-LVAPQRIDFLVDESRIFWSDIQQNEISSAGISNGLIEPIIN 1706
Query: 153 -------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
G A DWI ++Y+ ++ + + + +++ ++LDP+ G
Sbjct: 1707 TNIEKPYGFAVDWIARNMYFSSGQIKCNILASNLKGEFVSIIHEDLNMVDSIVLDPTNGK 1766
Query: 206 R-WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA--DSKLDFI 262
W+ G ++E+ +DGS+RS I + LT+D ++R+Y+A +S + +
Sbjct: 1767 MYWIHSASDGSMSQLEQSNLDGSSRSLIYQHENNL-QSLTMDFDSQRLYYAYDNSGIAYY 1825
Query: 263 DCKSLEIK--------TNVNYSTIFRKLYWIDEGGNGVPLKIGK 298
D E + T+++ T++ + E V ++ K
Sbjct: 1826 DIPRNETRKVLVASPITSISSLTVYNGTLYFPENIQSVIMQCEK 1869
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 20/114 (17%)
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPNGLTLDIATRRVYFADS 387
T L+W D E I R+ DG+ R TI+ + W G+ +D +Y++D+
Sbjct: 1992 TDTLYWGD-NELGSISRVKRDGTQRETILEALNLVGYKQQDWLGGIAIDWVAGNIYWSDT 2050
Query: 388 KLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTE 441
K + I+ DG+ R +++ + + T ALA+D G+L+Y T+
Sbjct: 2051 KRNIIEVARLDGSHR--YVVVSNLEKPT----------ALAVDPLQGLLFYVTQ 2092
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 14/102 (13%)
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
+FW+D +N I G+ II+T I P G +D R +YF+ ++ CN
Sbjct: 1681 IFWSDIQQN-EISSAGISNGLIEPIINTNIEKPYGFAVDWIARNMYFSSGQIK----CN- 1734
Query: 398 DGTGRQQVILIDLMVEFTNDLMGD-NGVPALALDLENGMLYY 438
++ +L EF + + D N V ++ LD NG +Y+
Sbjct: 1735 -------ILASNLKGEFVSIIHEDLNMVDSIVLDPTNGKMYW 1769
>gi|301771976|ref|XP_002921438.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-like [Ailuropoda melanoleuca]
Length = 855
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 155/302 (51%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 288 ECITLDKVCNSIRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKMGYECLCPKGFRLV 347
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC+ P CSQ+C N +GSY C C EG+ L+ CKA+ + A+L +N
Sbjct: 348 -DQRRCEDIDECQDPDVCSQLCVNLEGSYKCDCEEGFQLDPHTKACKAVGN-IAYLFFTN 405
Query: 123 RH--------------------SILVADLE---------------------EKGKDHRAQ 141
RH +++ D+E ++ +
Sbjct: 406 RHEVRKMTLDRSEYTSLIPNLKNVVALDMEVARNRIYWSDLSQRKIYSTHIDRATSFSSY 465
Query: 142 DIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D V+S L +GLA DWI +IYW DS L + V D G R L K+ ++PR +++D
Sbjct: 466 DTVISEDLQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFKEKGSKPRAIVVD 525
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD++ R+Y+ DSKL
Sbjct: 526 PVHG--FMYWTDWGTPAKIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLH 583
Query: 261 FI 262
I
Sbjct: 584 SI 585
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD--NITQPRGMMLD 200
+V + G+ D GG +YW+DS+L+ I D NG NR ++ +D + P + +
Sbjct: 555 LVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSIDVNGGNRKIVLEDKKKLAHPFSLAIF 614
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 615 EDK----IFWTD 622
>gi|442622884|ref|NP_788284.2| LDL receptor protein 1, isoform E [Drosophila melanogaster]
gi|440214197|gb|AAF59114.4| LDL receptor protein 1, isoform E [Drosophila melanogaster]
Length = 4725
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 174/373 (46%), Gaps = 67/373 (17%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
+ +CV + ++CDGK DC + DEG C C + CS+ CH TP G +C+CP L
Sbjct: 1226 SKQCVTVDQLCDGKNDCEDTTDEGFLCADKLCD-RGHECSHRCHNTPEGYICSCPDHLYL 1284
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+ C + C+ CSQ+C ++ Y C C +G+ L +D TCK+ ++I +
Sbjct: 1285 QPNGKRCSMQHACDHWDTCSQVCESSGKGYDCRCLDGFDLGFDRFTCKSTAPDEPYVIFT 1344
Query: 122 NRHSILVADLEE-------------------------------------------KGKDH 138
NR I +L+ G+
Sbjct: 1345 NRQDIKGINLKTLNVGNFYSSLRNIIALDFLYNNESNVEIYWTDVIDDKIYRGHLVGESL 1404
Query: 139 RAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
R + V+ SGL EGLA DW+G ++YW+DS L++IEV NG+ R L N+ PR +
Sbjct: 1405 RNVEAVIHSGLSTTEGLAVDWVGKNLYWIDSNLDQIEVAKLNGSFRRTLIAGNMESPRAI 1464
Query: 198 MLDPSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIST---KIYWPNGLTLDIATRRVY 253
LDP G LFWTDW +N PRIER M G R I ++ WPNGLTLD +RVY
Sbjct: 1465 ALDPREGL--LFWTDWDDNSPRIERASMSGDGRRMISTSWQLSAGWPNGLTLDYTQKRVY 1522
Query: 254 FADSKLDFIDC------------KSLEIKTNVNYSTIFRK-LYWIDEGGNGVPLKIGKAN 300
+ D+K D I ++ EI ++ ++F +YW D V ++ K N
Sbjct: 1523 WVDAKSDSISSTMYDGSEHHVVLRNKEILSHPFAISVFENYVYWTDWRTTSV-IRANKWN 1581
Query: 301 MDGSNASILVSGQ 313
GS+ +L Q
Sbjct: 1582 --GSDVQVLQRTQ 1592
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 191/412 (46%), Gaps = 87/412 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EILSN 63
C++ +CD + DC + +DE C++ EC +C + C +G C C PG ++L
Sbjct: 3008 CIHADLLCDRRNDCADFSDE-ELCNVNECLIP-DICEHECEDKVVGYQCHCRPGYKVLPK 3065
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
C D++EC++ CSQ C NT GSY C C +GY L D+HTCKA ++ + LI SNR
Sbjct: 3066 SPHLCTDIDECDEQQPCSQTCINTYGSYKCLCAKGYAL-VDHHTCKATSNVSMELIFSNR 3124
Query: 124 HSILVADLEEKG---------------------------------------KDHRAQDIV 144
+ I D+ G K+++ Q +
Sbjct: 3125 YYIRQVDMTGNGSILINELSNAVALDYDWDSQCLYWSDVTSTVGTIKRYCPKENKTQTLH 3184
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ L +GLA DW+ ++YW D L+ IEV +G R VL + + +PRG+ L P
Sbjct: 3185 QAMLKNPDGLAVDWVAKNLYWCDKGLDTIEVSQLDGKYRKVLINEYLREPRGIALHPY-- 3242
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
+ +FW+DWG++P I + GMDGSN II + WPN LT+ T+++++ D++ D I
Sbjct: 3243 QQHIFWSDWGDSPHIGKAGMDGSNPKMIIRDGLGWPNALTISFETQQLFWGDAREDTISV 3302
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
L+ GN L + + SI L+ A+ +
Sbjct: 3303 SDLD--------------------GNHTRLLLAR--------SINPLLNLHHIFAIAVWE 3334
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGM-DGSNRSTIISTKIYWPNGLTL 375
G +Y W+DW E IE + +G N +T+I+T I+ P L +
Sbjct: 3335 GHIY-----------WSDW-ETKSIEYCSIFNGQNCTTLITT-IHRPMDLRV 3373
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 102/452 (22%), Positives = 170/452 (37%), Gaps = 93/452 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ + CDGK DC +G+DE + C H G GA C ++L +
Sbjct: 2965 CIFKNQTCDGKPDCGDGSDETS----SLCAHTRGCNGTDDFRCKNGA---CIHADLLCDR 3017
Query: 65 SVTCQD--------MNECEQPGYCSQMCTNTKGSYICSCNEGY-VLEYDNHTCKAINH-- 113
C D +NEC P C C + Y C C GY VL H C I+
Sbjct: 3018 RNDCADFSDEELCNVNECLIPDICEHECEDKVVGYQCHCRPGYKVLPKSPHLCTDIDECD 3077
Query: 114 -----SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS 168
S + + L A H + ++L+ Y
Sbjct: 3078 EQQPCSQTCINTYGSYKCLCAKGYALVDHHTCKATSNVSMELIFSNRY------------ 3125
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP-RIERIGMDGS 227
I D G I++ + + LD ++ L+W+D I+R +
Sbjct: 3126 ---YIRQVDMTGNGSILINE----LSNAVALDYDWDSQCLYWSDVTSTVGTIKRYCPKEN 3178
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDE 287
T+ + P+GL +D + + LYW D+
Sbjct: 3179 KTQTLHQAMLKNPDGLAVDW------------------------------VAKNLYWCDK 3208
Query: 288 GGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
G + + + + +DG +L++ L E + L + +FW+DWG++P
Sbjct: 3209 GLDTIEV----SQLDGKYRKVLINEYLREPRGIALHPYQQH---------IFWSDWGDSP 3255
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
I + GMDGSN II + WPN LT+ T+++++ D++ D I + DG +
Sbjct: 3256 HIGKAGMDGSNPKMIIRDGLGWPNALTISFETQQLFWGDAREDTISVSDLDGNHTRL--- 3312
Query: 408 IDLMVEFTNDLMGDNGVPALALDLENGMLYYS 439
L+ N L+ + + A+A + G +Y+S
Sbjct: 3313 --LLARSINPLLNLHHIFAIA--VWEGHIYWS 3340
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 120/321 (37%), Gaps = 106/321 (33%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK--- 134
G C Q+C S +C+C L D ++C+ + F SN SI + D +K
Sbjct: 2243 GACEQLCLFNGTSAVCACAHSR-LASDGYSCEPYENFLLFSYRSNIESIHMTDHADKNWP 2301
Query: 135 -----------------------------------------GKDHRAQDIVVSGLDLVEG 153
G HR +++ VEG
Sbjct: 2302 VQMISNTSLMRNVIAITYNYEEQLVYYSDVQLSTINQVHFNGTGHR---VLLEQQQRVEG 2358
Query: 154 LAYDWIGGHIYWLDSRLNRI---------EVCDENGTN-RIVLAKDNITQPRGMMLDPSP 203
LAYD + ++W + I E D+N + + VL+ +PRG+ ++P
Sbjct: 2359 LAYDIVNEQLFWTSNNNATIRSVELRHLSEHADQNQVHVKKVLSLREDDKPRGIAVEPCL 2418
Query: 204 GTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G ++WT+W E +P I+R + G II T I PN LTLD+ +++Y+AD++LD
Sbjct: 2419 GM--IYWTNWNEGSPCIQRSYLTGYGTEVIIKTDIKMPNALTLDLEQQKLYWADARLD-- 2474
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
KI + N DGSN +L A A
Sbjct: 2475 --------------------------------KIERTNYDGSNRVVLAHSTPKHAFA--- 2499
Query: 323 ENGMLYYSTLKCTRWLFWTDW 343
M Y L LFWTDW
Sbjct: 2500 ---MAVYGDL-----LFWTDW 2512
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL-SN 63
C+ L++ CDG+ DC N + CD CS C TP GA C CP ++ S+
Sbjct: 157 CLELSRFCDGRWDCDNDELQ---CDKQNAACAALNCSFNCKLTPQGARCYCPKDQVPESS 213
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN 112
+S C D +EC +PG C Q+C NT GSY CSC GY N C+AIN
Sbjct: 214 NSTRCVDYDECSEPGTCDQVCRNTPGSYECSCVSGYAKTKGNR-CRAIN 261
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 122/327 (37%), Gaps = 83/327 (25%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG--CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV + +CDG DC DE L +C+H C N C
Sbjct: 3799 CVRNSALCDGINDCGENEDESDAVCAALPKCRHDQFQCEND----------DCISKAFRC 3848
Query: 63 NDSVTCQDMNE---CEQP----GYCSQMCTNTK-GSYICSCNEGYVL-EYDNHTCKAINH 113
+ C D ++ C+ P G CSQ+C K G Y C C +GY N TC A
Sbjct: 3849 DGQYNCVDGSDEMNCQPPVCGFGSCSQICIEKKAGHYNCKCADGYHKGPEKNATCLASGP 3908
Query: 114 SAAFLIISNR-------------------------------------------------- 123
L+ S +
Sbjct: 3909 DQILLLASEQEFRFILPAKQEGTTVVGFFQTDSLKIDVFDILIRPKDTLLFWIDSHHGKV 3968
Query: 124 HSILVADLEEKGKDHRAQDIV-------VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
H++ +A +G R + + + LD + LA DWI +Y +DSR N+I
Sbjct: 3969 HTMKIATPHVEGTGVRVRRDLKELTAFNIPELDDPKSLAVDWISQRVYIIDSRHNQILAT 4028
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 236
D G I L + P ++L+P +R + W+ EN I +DGSN+ +++
Sbjct: 4029 DIEGKKYISLVSTGMN-PTDIVLEPE--SRIMIWSTL-EN-GILVASLDGSNKKSLVERD 4083
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFID 263
+ WP L++D T R+Y+AD + I+
Sbjct: 4084 VGWPISLSMDYPTGRLYWADYRKGTIE 4110
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 153/373 (41%), Gaps = 78/373 (20%)
Query: 136 KDHRAQDIVVSGLDLVE--------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
+D ++ ++ L+LV G+A DW+ G+IYW D++ N IEV +G++R V+
Sbjct: 2026 RDGTQRETILEALNLVGYKQQDWLGGIAIDWVAGNIYWSDTKRNIIEVARLDGSHRYVVV 2085
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS-TKIYWPNG-LTL 245
N+ +P + +DP G LF+ I R+G+DGS +++ T+ W G L L
Sbjct: 2086 S-NLEKPTALAVDPLQGL--LFYV---TQQHIGRVGLDGSQPFVLVNQTRANWAVGSLVL 2139
Query: 246 DIATRRVYFADSKLDFI-------DCKSLEIKTNVNYSTIFRK----LYWIDEGGNGVPL 294
DI +VY+ + D + + + + ++N K LYW + N +
Sbjct: 2140 DIEATKVYWCERYPDALMKVDYDGNLREQLLNESLNNPVALAKMGDYLYWAENKYNEGII 2199
Query: 295 KIGK-ANMDGSNASILVSGQLYEALAL---DLENGM--LYYSTLKCTRWLFW--TDWGEN 346
++ AN+ S + L + L+ G +S C + + T
Sbjct: 2200 RVAPLANLSQSKVVLQTEQDAIRDLKIYSKHLQRGSNPCAHSNGACEQLCLFNGTSAVCA 2259
Query: 347 PRIERIGMDG------------SNRSTIISTKIY------WPN-------------GLTL 375
R+ DG S RS I S + WP +T
Sbjct: 2260 CAHSRLASDGYSCEPYENFLLFSYRSNIESIHMTDHADKNWPVQMISNTSLMRNVIAITY 2319
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGM 435
+ + VY++D +L I+ +++GTG + ++ VE LA D+ N
Sbjct: 2320 NYEEQLVYYSDVQLSTINQVHFNGTGHRVLLEQQQRVE------------GLAYDIVNEQ 2367
Query: 436 LYYSTEGAEFLKT 448
L++++ +++
Sbjct: 2368 LFWTSNNNATIRS 2380
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 22/177 (12%)
Query: 242 GLTLDIATRRVYFADSKLDFIDCKS---------LEIKTNVN---YSTIFRKLYWIDEGG 289
+T + + VY++D +L I+ LE + V Y + +L+W
Sbjct: 2316 AITYNYEEQLVYYSDVQLSTINQVHFNGTGHRVLLEQQQRVEGLAYDIVNEQLFWTSNNN 2375
Query: 290 ---NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE- 345
V L+ + D + + + L+L ++ + C ++WT+W E
Sbjct: 2376 ATIRSVELRHLSEHADQNQVHV------KKVLSLREDDKPRGIAVEPCLGMIYWTNWNEG 2429
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
+P I+R + G II T I PN LTLD+ +++Y+AD++LD I+ NYDG+ R
Sbjct: 2430 SPCIQRSYLTGYGTEVIIKTDIKMPNALTLDLEQQKLYWADARLDKIERTNYDGSNR 2486
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 16/178 (8%)
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNITQPRGMMLDPSP 203
VS L DW+ G+ Y + + +C T R++L + + + LDP+
Sbjct: 365 VSPQQFFTELRLDWLSGNWYLVSEDDGLVYLCTNAMTYCRVILQQ--VDPLSSLDLDPTK 422
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G ++F+TDW P + R +DGSNR+ +++ ++Y P+ +TLD+A VY+ D D ++
Sbjct: 423 G--FMFYTDW--TPSLSRSLLDGSNRTVLVTDQVYHPSSVTLDLANELVYWIDIYKDEVN 478
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
E + N T+ R L + VPLK A N+ L + +ALD
Sbjct: 479 RVDYEGR---NRWTLKRPL------DSPVPLKTIHAVEVFENSIYLAAWMDTAIVALD 527
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 59/234 (25%)
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPNGLTLDIATR 250
+D T L+W D E I R+ DG+ R TI+ + W G+ +D
Sbjct: 2001 FIDYLANTDTLYWGD-NELGSISRVKRDGTQRETILEALNLVGYKQQDWLGGIAIDWVAG 2059
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
+Y++D+K + I+ A +DGS+ ++V
Sbjct: 2060 NIYWSDTKRNIIE----------------------------------VARLDGSHRYVVV 2085
Query: 311 SG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS-TKIY 368
S + ALA+D G+L+Y T + I R+G+DGS +++ T+
Sbjct: 2086 SNLEKPTALAVDPLQGLLFYVTQQ--------------HIGRVGLDGSQPFVLVNQTRAN 2131
Query: 369 WPNG-LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
W G L LDI +VY+ + D + +YDG R+Q++ L MGD
Sbjct: 2132 WAVGSLVLDIEATKVYWCERYPDALMKVDYDGNLREQLLNESLNNPVALAKMGD 2185
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 90/233 (38%), Gaps = 58/233 (24%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL V +A+DWI H+YW + +++V ++++ T M L+
Sbjct: 695 LLAQGLKRVHAVAFDWINDHLYWTSHK--KMQVAPLRNLSKVLTFN---TDCDAMSLELD 749
Query: 203 PGTRWLFWTDWGEN---PRIERIGMDGSNRSTII----STKIYWPNGLTLDIATRRVYFA 255
P T L+W+ W I MDG+++ + S + WP L +D T+ +Y+
Sbjct: 750 PTTGLLYWSQWESQSCEAGIYSSWMDGTHKELLAKGTSSMPMQWPRSLDVDRRTKELYWC 809
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D +L I+ + R +DG+ +L +
Sbjct: 810 DIRLSTIE--------------LMR--------------------LDGTGREVLFKSDQF 835
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY 368
++ NG++Y W D +N I R +N S+ S+ ++
Sbjct: 836 HPYSIVQNNGLIY-----------WAD-NKNSTILRFHAHQANLSSTFSSTVH 876
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
++F+TDW P + R +DGSNR+ +++ ++Y P+ +TLD+A VY+ D D ++ +
Sbjct: 424 FMFYTDW--TPSLSRSLLDGSNRTVLVTDQVYHPSSVTLDLANELVYWIDIYKDEVNRVD 481
Query: 397 YDGTGR 402
Y+G R
Sbjct: 482 YEGRNR 487
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 21/140 (15%)
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
+FW+D +N I G+ II+T I P G +D R +YF+ + I C L
Sbjct: 1697 IFWSDIQQN-EISSAGISNGLIEPIINTNIEKPYGFAVDWIARNMYFSSGQ---IKCNIL 1752
Query: 268 EIKTNVNYSTIFR----------------KLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+++I K+YWI +G ++ ++N+DGS+ S++
Sbjct: 1753 ASNLKGEFASIIHEDLNMVDSIVLDPANGKMYWIHSASDGSMSQLEQSNLDGSSRSLIYQ 1812
Query: 312 GQ-LYEALALDLENGMLYYS 330
+ ++L +D ++ LYY+
Sbjct: 1813 HENNLQSLTMDFDSQRLYYA 1832
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 46/226 (20%)
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEG----GNGVP-LKIGKANMDGSNASILVSG-QLYEAL 318
K+L I NV +F + D G GNG P I +++GS + +L G + A+
Sbjct: 649 KTLAIDVNVRGKAVFYVV--ADSGASPFGNGEPSCSIRSQSLNGSVSRLLAQGLKRVHAV 706
Query: 319 ALDLENGMLYYSTLK-----------------------------CTRWLFWTDWGEN--- 346
A D N LY+++ K T L+W+ W
Sbjct: 707 AFDWINDHLYWTSHKKMQVAPLRNLSKVLTFNTDCDAMSLELDPTTGLLYWSQWESQSCE 766
Query: 347 PRIERIGMDGSNRSTII----STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
I MDG+++ + S + WP L +D T+ +Y+ D +L I+ DGTGR
Sbjct: 767 AGIYSSWMDGTHKELLAKGTSSMPMQWPRSLDVDRRTKELYWCDIRLSTIELMRLDGTGR 826
Query: 403 QQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKT 448
+ + D ++ ++ +NG+ A + + +L + A T
Sbjct: 827 EVLFKSDQFHPYS--IVQNNGLIYWADNKNSTILRFHAHQANLSST 870
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 109/277 (39%), Gaps = 29/277 (10%)
Query: 78 GYCSQMCTNTKG-SYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G C Q+C T ++C C GY +E +N T F I + + D E+
Sbjct: 1925 GGCQQLCLATSSIDHVCRCALGYDVEPNNPTGCVPRAEFIFYSIDVLQGVEMIDPSEQFD 1984
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLAKDNITQPR 195
+ +S + + Y +YW D+ L I +GT R +L N+ +
Sbjct: 1985 TPSPALVPISRVSSASFIDYLANTDTLYWGDNELGSISRVKRDGTQRETILEALNLVGYK 2044
Query: 196 ------GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
G+ +D G ++W+D N IE +DGS+R ++S + P L +D
Sbjct: 2045 QQDWLGGIAIDWVAGN--IYWSDTKRN-IIEVARLDGSHRYVVVSN-LEKPTALAVDPLQ 2100
Query: 250 RRVYFADSK------LDFIDCKSLEIKTNVNYST-------IFRKLYWIDEGGNGVPLKI 296
+++ + LD L +T N++ K+YW + P +
Sbjct: 2101 GLLFYVTQQHIGRVGLDGSQPFVLVNQTRANWAVGSLVLDIEATKVYWCER----YPDAL 2156
Query: 297 GKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
K + DG+ L++ L +AL LY++ K
Sbjct: 2157 MKVDYDGNLREQLLNESLNNPVALAKMGDYLYWAENK 2193
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 123/306 (40%), Gaps = 51/306 (16%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLDPSPGTRWLFW 210
GL D+ +YW+D++ + I +G+ V+ ++ ++ P + S +++W
Sbjct: 1511 GLTLDYTQKRVYWVDAKSDSISSTMYDGSEHHVVLRNKEILSHPFAI----SVFENYVYW 1566
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS-KLDFIDCKSLEI 269
TDW I +GS+ + T+ P G+ + ++R+ + + + C L +
Sbjct: 1567 TDWRTTSVIRANKWNGSDVQVLQRTQSQ-PFGIQVLHSSRQPWDRNPCGENNGGCSHLCL 1625
Query: 270 KTNV-NYSTIFRKLYWIDEGG--NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGM 326
+ + + +D N VP N +L+ + E +DL
Sbjct: 1626 LSGRGTFKCECPHVMRLDPANERNCVP-----------NEQVLLFVMVDEIRGIDLHQPN 1674
Query: 327 LYYSTLKCTRW-------------LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
+ T+ R +FW+D +N I G+ II+T I P G
Sbjct: 1675 --HHTIPTIRQSPRRIDFLVDESRIFWSDIQQN-EISSAGISNGLIEPIINTNIEKPYGF 1731
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD-NGVPALALDLE 432
+D R +YF+ ++ CN ++ +L EF + + D N V ++ LD
Sbjct: 1732 AVDWIARNMYFSSGQIK----CN--------ILASNLKGEFASIIHEDLNMVDSIVLDPA 1779
Query: 433 NGMLYY 438
NG +Y+
Sbjct: 1780 NGKMYW 1785
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 343 WGENP--RIERIGMDGSNRSTIIST-------KIYWPNGLTLDIATRRVYFADSKLDFID 393
WG+N I R+ DG+ R TI+ + W G+ +D +Y++D+K + I+
Sbjct: 2013 WGDNELGSISRVKRDGTQRETILEALNLVGYKQQDWLGGIAIDWVAGNIYWSDTKRNIIE 2072
Query: 394 FCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTE 441
DG+ R +++ + + T ALA+D G+L+Y T+
Sbjct: 2073 VARLDGSHR--YVVVSNLEKPT----------ALAVDPLQGLLFYVTQ 2108
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 134/323 (41%), Gaps = 61/323 (18%)
Query: 70 DMNEC-EQPGYCSQMCT-NTKGSYICSC----------------NEGYVL---------- 101
D N C E G CS +C + +G++ C C NE +L
Sbjct: 1609 DRNPCGENNGGCSHLCLLSGRGTFKCECPHVMRLDPANERNCVPNEQVLLFVMVDEIRGI 1668
Query: 102 ---EYDNHTCKAINHSAA---FLIISNRHSILVADLEEKGKDHRA------QDIVVSGLD 149
+ ++HT I S FL+ +R I +D+++ + I+ + ++
Sbjct: 1669 DLHQPNHHTIPTIRQSPRRIDFLVDESR--IFWSDIQQNEISSAGISNGLIEPIINTNIE 1726
Query: 150 LVEGLAYDWIGGHIYWLDSRLN-RIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTR-W 207
G A DWI ++Y+ ++ I + G ++ +D + ++LDP+ G W
Sbjct: 1727 KPYGFAVDWIARNMYFSSGQIKCNILASNLKGEFASIIHED-LNMVDSIVLDPANGKMYW 1785
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA--DSKLDFIDCK 265
+ G ++E+ +DGS+RS I + LT+D ++R+Y+A +S + + D
Sbjct: 1786 IHSASDGSMSQLEQSNLDGSSRSLIYQHENNL-QSLTMDFDSQRLYYAYDNSGIAYYDIP 1844
Query: 266 SLEIK--------TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL-VSGQLYE 316
E + T+++ T++ + E V ++ K SN S L V+ + +
Sbjct: 1845 RNETRKVLVASPITSISSLTVYNGTLYFPENIQSVIMQCEKEAC--SNMSYLRVNTKSIQ 1902
Query: 317 ALALDLENGMLYYSTLKCTRWLF 339
++ + + +T C W +
Sbjct: 1903 SMKMFYADAQTGSNT--CAEWAY 1923
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALC----TCPPG 58
C+ + CDGK+DC +G+DEGP C C+ C ++ P +C CP G
Sbjct: 2828 CIPASWQCDGKSDCEDGSDEGPQCPNRPCRPHLFQCKSSGRCIPQKWVCDGEKDCPSG 2885
>gi|119604576|gb|EAW84170.1| low density lipoprotein receptor (familial hypercholesterolemia),
isoform CRA_c [Homo sapiens]
Length = 597
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 155/301 (51%), Gaps = 47/301 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 26 CITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVA 85
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
C+D++EC+ P CSQ+C N +G Y C C EG+ L+ CKA+ S A+L +NR
Sbjct: 86 QR-RCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG-SIAYLFFTNR 143
Query: 124 HSIL------------------VADLEEKGKDHR------AQDIV----------VSGLD 149
H + V L+ + +R +Q ++ VS D
Sbjct: 144 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD 203
Query: 150 LV--------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
V +GLA DWI +IYW DS L + V D G R L ++N ++PR +++DP
Sbjct: 204 TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDP 263
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL
Sbjct: 264 VHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 321
Query: 262 I 262
I
Sbjct: 322 I 322
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLD 200
+V + G+ D + G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 292 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF 351
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 352 EDK----VFWTD 359
>gi|312231791|gb|ADO17799.1| vitellogenin receptor [Micropterus salmoides]
Length = 842
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 147/301 (48%), Gaps = 46/301 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ ++KVC+ DCP+ +DE C+L EC G CS+ C +G C C PG L
Sbjct: 326 ECIEMSKVCNKARDCPDWSDEPIKECNLNECLLNNGGCSHICKDMVIGFECDCTPGLQLI 385
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D+NEC PG CSQ+C N KG Y C C+ GY ++ CKA+ LI +N
Sbjct: 386 -DHKTCGDINECLNPGICSQICINLKGGYKCECHNGYQMDPTTGVCKAVGKEPC-LIFTN 443
Query: 123 RHSILVADLE-----------------------------------------EKGKDHRAQ 141
R I LE +K D
Sbjct: 444 RRDIRRPGLERKEYTQIVEQQRNAVALDADFNQQMIFWADLGQKAIYSTLLDKRGDIGTH 503
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+ V+ + G+A DWI ++YW D I V + NGT + VL + +P + +DP
Sbjct: 504 NKVIDNVQTPVGIAVDWIYKNLYWSDLGTKTISVANFNGTKQKVLFNRGLKEPASIAVDP 563
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+W+DWGE +IE+ GM+G +R +++T I WPNG+TLD+ R+Y+ DSKL
Sbjct: 564 LSG--FLYWSDWGEPAKIEKSGMNGVDRQVLVATDIQWPNGITLDLIKGRLYWVDSKLHM 621
Query: 262 I 262
+
Sbjct: 622 L 622
>gi|82524130|emb|CAJ19121.1| vitellogenin receptor [Blattella germanica]
Length = 1818
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 165/336 (49%), Gaps = 52/336 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C++L ++CD CP+ +DEGPGC+ ++ + C++ C PTP G C C G ++ +
Sbjct: 211 CISLNELCDEVQHCPDHSDEGPGCNNSKITCRTAWCNHRCIPTPQGPQCVCQTGYTMAVN 270
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA-----------INH 113
+ TC D++EC + G C Q C N G Y C C+EGY L D TC+A +
Sbjct: 271 N-TCVDIDECLEYGICDQKCLNMPGKYDCYCDEGYELAEDKRTCRATGADPLLVFASTDE 329
Query: 114 SAAFLIISNRHSILVADLE--------------------EKGKDHRAQD------IVVSG 147
F I + + ++ + LE E+ ++D +V +G
Sbjct: 330 IRGFYIKKDFYFVIASKLERAVGISYDRGHVYWTDLMFGEEAIVRSSEDGSHVETLVTAG 389
Query: 148 LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
L E L DW+ +IY+ D+ I VC NG+ VL ++I +PR + L P+ G
Sbjct: 390 LYEPEDLMVDWVTENIYFTDAEAKHIGVCSNNGSMCTVLVNEDIDKPRAIALLPTEG--L 447
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
+FW+DWG+ I R GMDGS IST +++ NGLT+DI R+Y+ D+K I+ L
Sbjct: 448 MFWSDWGKK-IIARAGMDGSKPEAFISTNLHYANGLTIDIHNDRLYWVDAKYLVIESCKL 506
Query: 268 -----------EIKTNVNYSTIFRKLYWIDEGGNGV 292
E+K + + LYW D G+G+
Sbjct: 507 DGTDRRIILQNEVKHPYSIAVFEDTLYWSDWQGHGI 542
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 157/341 (46%), Gaps = 62/341 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV+L+ VC+G+ DC + +DEG C + CK + C C TP G C C G L N+
Sbjct: 1239 CVSLSLVCNGRQDCSDSSDEGGFCG-SSCKEGYP-CQQVCMKTPRGPQCGCSKGFKLLNN 1296
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
CQD+NECE C+Q+C NT GS+ C C+ G+ L D +CKAI + F+ ++++
Sbjct: 1297 GAKCQDINECESQ-VCAQVCHNTPGSFSCICDAGFELRSDRISCKAIGKAKEFIFVADKQ 1355
Query: 125 SILVA-DLEEKGKDHRAQDIVVSGLD----------------------LVEG-------- 153
V +L + D V+GLD L+ G
Sbjct: 1356 IRRVTHELRFMKIAYLDYDFKVTGLDVDSKLGMVYWSSDETNTIYRMSLIGGTKAYLTGI 1415
Query: 154 -----LAYDWIGGHIYWLDS-RLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTR 206
+A DWI ++Y++D + I+VC+ ++ + V+ D+ + +DP G
Sbjct: 1416 GSPTDIALDWITQNVYYVDKDTIQSIKVCNLDSQQHATVVHVDSGYSASRIAVDPFAG-- 1473
Query: 207 WLFWTD---WG-ENPR--IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
++FW + W E P+ + R M G NR T+++ + G+ LD+ +R++ AD +
Sbjct: 1474 FIFWIEISTWNIEIPKSILIRADMSGENRKTLVNEHMMLVYGIALDVVRKRIFIADEHQN 1533
Query: 261 FIDC-------------KSLEIKTNVNYSTIFRKLYWIDEG 288
I+ + ++ +N + LYW+ G
Sbjct: 1534 TIESMGYSGEDRHVVVDSNEHVQKPINLALFEGTLYWLTSG 1574
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 65/141 (46%), Gaps = 25/141 (17%)
Query: 308 ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD--WGENPRIERIGMDGSNRSTIIST 365
+++ +L A+ + + G +Y WTD +GE I R DGS+ T+++
Sbjct: 341 FVIASKLERAVGISYDRGHVY-----------WTDLMFGEEA-IVRSSEDGSHVETLVTA 388
Query: 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVP 425
+Y P L +D T +YF D++ I C+ +G+ ++ D+ +
Sbjct: 389 GLYEPEDLMVDWVTENIYFTDAEAKHIGVCSNNGSMCTVLVNEDI-----------DKPR 437
Query: 426 ALALDLENGMLYYSTEGAEFL 446
A+AL G++++S G + +
Sbjct: 438 AIALLPTEGLMFWSDWGKKII 458
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 79/201 (39%), Gaps = 21/201 (10%)
Query: 109 KAINHSAAFLIIS-NRHSILVADLEEK----GKDHRAQDIVVSGLDLVEGLAYDWIGGHI 163
+A+NH A S H ++ ++ K G + S + ++G+ +D++G +I
Sbjct: 654 QAVNHIGAITYNSLTGHLVIFDAVQHKLFNLGLKTMKLSQLASDVGYIDGMDFDYLGNNI 713
Query: 164 YWLDSRLNRIEVCDENGTNRIVLAKDNITQ-PRGMMLDPSPGTRWL----FWTDWGENPR 218
Y D + IE+ R VL + P + + P G ++ T P
Sbjct: 714 YLCDGQKATIEILSLTTLERPVLLHSFEGEVPLDIAVVPEEGIMFIAMSRHLTSSENGPH 773
Query: 219 IERIGMDGSNRSTIISTKIYWP-NGLTLDIATRRVYFADSKLDFIDCKSL---------- 267
I+R+ MDG I+ + + P L D RV++ D I +
Sbjct: 774 IDRMTMDGREHFHIVESGLDGPIISLHYDKELHRVFWTDPNEGQIGSAAANGMDQHIYKH 833
Query: 268 EIKTNVNYSTIFRKLYWIDEG 288
I + +++ R L+W D G
Sbjct: 834 SINNPSDVASLGRDLFWTDWG 854
>gi|47228669|emb|CAG07401.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2378
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 128/420 (30%), Positives = 185/420 (44%), Gaps = 108/420 (25%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+N T +CD DC +G+DE C + EC K CS C +G C C PG L
Sbjct: 673 CLNETLLCDRNDDCGDGSDE-LNCFINECLNSKLSGCSQLCDDLKIGYKCRCHPGFQLKR 731
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYV-------------------LEYD 104
D TC D++EC CSQ C NT GS+ C C +G+ L+
Sbjct: 732 DGKTCVDVDECLTTYPCSQRCINTHGSFHCLCVDGFQPKEEPYLIFANRYYLRKLNLDGS 791
Query: 105 NHT---------------------CKAINHSAAFLIISN---------RHSILVADLEEK 134
N+T C N F ++N I D+ +
Sbjct: 792 NYTLIKQVRSAPAETMRWSSLLGPCARFNPFRHFQGLNNAVALDFHYAEQMIYWTDVTTQ 851
Query: 135 GKDHRAQDIVVSGLDLV--------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL 186
G R + S ++++ +GLA DW+GG++YW D + IEV NG R VL
Sbjct: 852 GSMIRRMHMNGSNMEVLHRTSLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVL 911
Query: 187 AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 246
+ +PR + +D R+L+W+DWG+NP I RIGMDGSNRS I+ KI WPNGLTLD
Sbjct: 912 VNSGLREPRALAVDVR--YRYLYWSDWGDNPHIGRIGMDGSNRSVIVEEKITWPNGLTLD 969
Query: 247 IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
R+Y+AD++ D+I+ A++DG+N
Sbjct: 970 FINDRIYWADAREDYIE----------------------------------FASLDGTNR 995
Query: 307 SILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIST 365
+++ + A+ L +++WTDW E I R G+N++T+IST
Sbjct: 996 HTVLNHDIPHIFAMTLFE-----------EYIYWTDW-ETKSINRAHKTQGTNKTTLIST 1043
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 143/329 (43%), Gaps = 75/329 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSN----TCHPTPLGALCTC 55
RC++ T C+ DC + + GC L +C+ C + C + C+C
Sbjct: 1551 RCISSTLRCNLFNDCEDFGSDEIGCKTDTKLNDCRSNRTHCGDGDEAHCVTNGTDSFCSC 1610
Query: 56 PPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA--INH 113
PG TC D NEC Q G CS C NTKGSY CSC++ + D TCKA IN
Sbjct: 1611 KPG-FQKIGHRTCGDKNECLQFGVCSHSCNNTKGSYKCSCHKYFTRISD--TCKADNINS 1667
Query: 114 SAAFLIIS--------------------------------------------NRHSILVA 129
S L I+ N H+ ++
Sbjct: 1668 SRQILYIADDNEIRSLDPGMPDWRYEQTFQGDASVRIDAMDVHVKTNRIFWTNWHTGRIS 1727
Query: 130 DLEEKGKD----------HRAQ------DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI 173
E +G HR Q D+ + L + G+A DW+ G++YW DS + I
Sbjct: 1728 TYELQGPSLSATSSNSHRHRRQSEGRVTDLQIKELKMPRGIAVDWVAGNLYWTDSGRDVI 1787
Query: 174 EVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
EV +G N L I +P ++++P GT ++W DWG +P+IE MDG+ R T++
Sbjct: 1788 EVAQMSGQNCKTLISGMIDEPYAIVVNPQRGT--MYWADWGNHPKIETAAMDGTLRQTLV 1845
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFI 262
I WP GL +D R+Y+AD+KL I
Sbjct: 1846 HENIQWPTGLAVDYFNERLYWADAKLSVI 1874
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 333 KCTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E P I R ++G+N II + I PNGL +D ++YF+D+ LD
Sbjct: 91 ECQDLMFWTNWNEQAPSIMRASLNGANVLVIIGSDIKTPNGLAIDHRAEKLYFSDATLDK 150
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
I+ C YDG+ R ++ + + F + GD
Sbjct: 151 IERCEYDGSSRYVLLKNEPVHPFGLAVYGD 180
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 77/200 (38%), Gaps = 54/200 (27%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT------QPRGMMLDPSPG 204
VEGLAY +YW + I + + + +D + PR +LD
Sbjct: 35 VEGLAYHRGWDTLYWTSYTTSTITRHTVDQSRTVAYNRDTVVNMSAEDHPRAFVLDEC-- 92
Query: 205 TRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+FWT+W E P I R ++G+N II + I PNGL +D ++YF+D+ LD
Sbjct: 93 QDLMFWTNWNEQAPSIMRASLNGANVLVIIGSDIKTPNGLAIDHRAEKLYFSDATLD--- 149
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
KI + DGS+ +L+ +
Sbjct: 150 -------------------------------KIERCEYDGSSRYVLLKNEPVHPF----- 173
Query: 324 NGMLYYSTLKCTRWLFWTDW 343
G+ Y ++FWTDW
Sbjct: 174 -GLAVYGD-----YIFWTDW 187
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ S + GLA D +Y+ D+ L++IE C+ +G++R VL K+ P G+ +
Sbjct: 121 IIGSDIKTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSSRYVLLKNEPVHPFGLAV--- 177
Query: 203 PGTRWLFWTDW 213
++FWTDW
Sbjct: 178 -YGDYIFWTDW 187
>gi|332853027|ref|XP_003316162.1| PREDICTED: low-density lipoprotein receptor [Pan troglodytes]
Length = 682
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 153/301 (50%), Gaps = 47/301 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 162 CITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVA 221
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
C+D++EC+ P CSQ+C N +G Y C C EG+ L+ CKA+ S A+L +NR
Sbjct: 222 QR-RCEDIDECQHPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG-SIAYLFFTNR 279
Query: 124 HSI------------LVADLE-----------------------------EKGKDHRAQD 142
H + L+ +L ++ + D
Sbjct: 280 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD 339
Query: 143 IVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
V+S + +GLA DWI +IYW DS L + V D G R L ++N ++PR +++DP
Sbjct: 340 TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDP 399
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL
Sbjct: 400 VHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 457
Query: 262 I 262
I
Sbjct: 458 I 458
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLD 200
+V + G+ D + G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 428 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTVLEDEKRLAHPFSLAVF 487
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 488 EDK----VFWTD 495
>gi|343409580|gb|AEM23934.1| very low density lipoprotein receptor transcript variant 1 [Anas
platyrhynchos]
Length = 881
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 115/363 (31%), Positives = 174/363 (47%), Gaps = 62/363 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+++ KVC+ + DC + +DE C++ EC G CS+ C +G C CP G L
Sbjct: 335 ECIDINKVCNQQRDCKDWSDEPLKECNINECLVNNGGCSHICRDFIIGYECDCPAGFELV 394
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ LI +N
Sbjct: 395 -DKRTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPC-LIFTN 452
Query: 123 RHSI----------------------LVADLEEKG---KDHRAQDIVVSGLDLVE----- 152
R I L AD+ E+ D + I + +D +
Sbjct: 453 RRDIRKIGLERKEYIQLVEQLRNTVALDADIAEQKLYWADFSQKAIFSASIDTRDKVGTH 512
Query: 153 -----------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
G+A DW+ +IYW DS I V +G R VL + +P + +DP
Sbjct: 513 IRILDNIHSPAGIAVDWVYKNIYWTDSAAKTISVASLDGRKRKVLFLSELREPASIAVDP 572
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++W+DWGE +IE+ GM+G +R +++T+I WPNG+ LD+ R+Y+ DSKL
Sbjct: 573 LSG--FMYWSDWGEPAKIEKAGMNGFDRQQLVTTEIQWPNGIALDLVKSRLYWLDSKLHM 630
Query: 262 IDC-------KSLEIKTNVNYS-----TIFR-KLYWIDEGGNGVPLKIGKANMDGSNASI 308
+ + L +K+++ TIF ++YWID V G GS
Sbjct: 631 LSSIDLNGQDRRLVLKSHMFLPHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELVT 687
Query: 309 LVS 311
LV+
Sbjct: 688 LVN 690
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 101/206 (49%), Gaps = 34/206 (16%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST- 277
I +IG++ ++ ++ L DIA +++Y+AD I S++ + V
Sbjct: 456 IRKIGLERKEYIQLVE-QLRNTVALDADIAEQKLYWADFSQKAIFSASIDTRDKVGTHIR 514
Query: 278 ---------------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALAL 320
+++ +YW D + + A++DG +L +L E ++A+
Sbjct: 515 ILDNIHSPAGIAVDWVYKNIYWTDSAAKTISV----ASLDGRKRKVLFLSELREPASIAV 570
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
D +G +Y W+DWGE +IE+ GM+G +R +++T+I WPNG+ LD+
Sbjct: 571 DPLSGFMY-----------WSDWGEPAKIEKAGMNGFDRQQLVTTEIQWPNGIALDLVKS 619
Query: 381 RVYFADSKLDFIDFCNYDGTGRQQVI 406
R+Y+ DSKL + + +G R+ V+
Sbjct: 620 RLYWLDSKLHMLSSIDLNGQDRRLVL 645
>gi|443714071|gb|ELU06639.1| hypothetical protein CAPTEDRAFT_220131 [Capitella teleta]
Length = 1785
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 150/540 (27%), Positives = 227/540 (42%), Gaps = 120/540 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE---CKHKFGLCSNTCHPTPLGALCTCPPGEI 60
RC+ + CDG+ DC + +DE GC E + +F N+C +G +C
Sbjct: 301 RCIYGSWRCDGEYDCSDNSDE-EGCQDEEMQCAEGQFKCDDNSC--IAIGKVCDGHQDCE 357
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
D C ++NECE G CSQ C NT+GSY CSC +GY L D TCKA+ +LI
Sbjct: 358 GGADEHLC-NLNECEFDGSCSQNCVNTEGSYRCSCVQGYDLRPDGRTCKALG-GEPYLIF 415
Query: 121 SNR------------HSILVADLE--------------------------EKGKDHRAQD 142
+NR ++ ++ LE + Q+
Sbjct: 416 ANRIDIRKLAPAQDGYTSILKGLENAIALDFHLHNDWVFWSDVTLDCIKRSRMNGSEVQE 475
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V +GL++ G+A DWI ++W D+ RIE + +G+ R VL +N+ +PR ++ P
Sbjct: 476 VVCNGLEIPGGVAVDWIHDKLFWTDAGTARIEASNLDGSMRRVLLAENLEKPRAIVAHPG 535
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
GT L+WTDWG P+IER MDG +R I ++WPNGL LD A ++Y+ D+K I
Sbjct: 536 EGT--LYWTDWGMQPKIERCSMDGQDRRVIAHRSLFWPNGLALDYAGSKLYWVDAKHHVI 593
Query: 263 DCKSLEIKTNVNYSTIFRK--------------LYWIDEGGNGVPLKIGKANMDGSNASI 308
+C L+ N T+ + LYW D I KAN N SI
Sbjct: 594 ECADLD---GANRKTVLSRGLPHPFAITMFEDDLYWTDWHMK----SINKANKFTGNVSI 646
Query: 309 -LVSGQLYEALALD---------------LENG---------------------MLYYST 331
V QLY + + NG +L +
Sbjct: 647 TTVHTQLYFPMDIHTFHPQRQPQGTNRCGANNGECSHLCLPNLTGYTCACPTGFLLLPDS 706
Query: 332 LKCTRWLF-WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL--DIATRRVYFADSK 388
CT L + + I +I D S R+ ++ + + L D + +Y+ D
Sbjct: 707 KSCTENLHNFLLFSRRTDIRQISFDTSERADVVIPLEGLQSAMALDWDASHDYIYWTDIS 766
Query: 389 LDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKT 448
+ I +DG G Q+VIL D G LA+D G +Y++ + ++
Sbjct: 767 QNTISRSRWDGAG-QEVILTD----------GIESPTGLAIDWITGKMYWTEASVDRIEV 815
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 125/419 (29%), Positives = 180/419 (42%), Gaps = 77/419 (18%)
Query: 33 CKHKFGLCSNTCHPTPLGAL-------CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCT 85
C H G CS+ C +P G + C CP G +L++D TCQ P S +
Sbjct: 979 CHHDNGGCSHLCLLSPSGDVSTPVTHSCACPTGILLNSDGKTCQ-------PEMTSFLVV 1031
Query: 86 NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA---DLEEKG------- 135
+ E + D +++ A +I +H VA DL EK
Sbjct: 1032 ARR-------TEIRAISLD------VDYFADVIIPLGKHGNAVAVDVDLVEKKIYWSDTV 1078
Query: 136 --KDHRA-------QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL 186
K RA +D++VSG+ +GLA D G IYW D+ +RIEV +GT R VL
Sbjct: 1079 HEKIMRANLDGSAIEDVIVSGISTPDGLAVDSTGRKIYWSDTDTDRIEVATLDGTMRKVL 1138
Query: 187 AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 246
N+ +PR + L+ G +FWTDWG PRIER MDG+NR T+I + WPNG+T+D
Sbjct: 1139 VWSNLDKPRAITLNYDHGL--IFWTDWGNKPRIERADMDGNNRMTLIKDNLGWPNGITVD 1196
Query: 247 IATRRVYFADSKLDFIDCKSL---EIKTNVN-------YSTIFRKLYWIDEGGNGVPLKI 296
T R+ + D+K + I+C E + VN + +YW D G +
Sbjct: 1197 RPTSRIIWNDAKTEVIECSDFSGSERRLLVNAVPHPYGLTVSGDFIYWTDWVQKG----L 1252
Query: 297 GKANMDGSNASILVSGQ---LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
+A+ +V GQ L E A+ L M L R I RI
Sbjct: 1253 SRADKLTGEGVEIVRGQMLRLMEVRAVHLTERMPEVFLLFAVR----------GSIRRIS 1302
Query: 354 MDGSNRSTIISTKIYWPNGLTLDIATRR--VYFADSKLDFIDFCNYDGTGRQQVILIDL 410
MD + +I N + +D R Y+ D D I + +G+ + V+ DL
Sbjct: 1303 MDTKDHVDVIVDLPDLHNPIAVDFHFDRGLFYYTDVYADVIRRASLNGSFSEVVVDADL 1361
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 139/317 (43%), Gaps = 91/317 (28%)
Query: 69 QDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI- 126
Q N C G CS +C Y C+C G++L D+ +C H+ FL+ S R I
Sbjct: 669 QGTNRCGANNGECSHLCLPNLTGYTCACPTGFLLLPDSKSCTENLHN--FLLFSRRTDIR 726
Query: 127 -LVADLEEKGK--------------------------------------DHRAQDIVVS- 146
+ D E+ D Q+++++
Sbjct: 727 QISFDTSERADVVIPLEGLQSAMALDWDASHDYIYWTDISQNTISRSRWDGAGQEVILTD 786
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTR 206
G++ GLA DWI G +YW ++ ++RIEV + +G+ R VL + + +PR +M+DP G
Sbjct: 787 GIESPTGLAIDWITGKMYWTEASVDRIEVANLDGSMRTVLVWEALDKPRDIMVDPLHG-- 844
Query: 207 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKS 266
+++WTDWGE P+IER GMDGS RS ++ I WPNGL +D + R
Sbjct: 845 YMYWTDWGEVPKIERAGMDGSQRSVLVEHNITWPNGLAIDYGSGR--------------- 889
Query: 267 LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGM 326
LYW+D +I N+DG+ S+++S L +L L +
Sbjct: 890 ---------------LYWVD----AAEKRIEACNLDGTQRSVILSEGLQHPFSLTLFDDE 930
Query: 327 LYYSTLKCTRWLFWTDW 343
+Y WTDW
Sbjct: 931 MY-----------WTDW 936
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 77/125 (61%), Gaps = 2/125 (1%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V + L +G+A DW+ ++YW D+ N IEV +G++R +L N+ +PR + + P
Sbjct: 1356 VVDADLSTADGIAVDWLADNLYWTDTGRNTIEVTRLDGSSRRILVSRNVDEPRSIAVHPQ 1415
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +FWTDWG P+IE+ +DGS+R T++ + WPNGL +D R+Y+ D+ LD I
Sbjct: 1416 KGL--MFWTDWGSTPKIEKAFLDGSSRHTVVQESLVWPNGLCIDYEADRLYWVDANLDCI 1473
Query: 263 DCKSL 267
+ L
Sbjct: 1474 ETSDL 1478
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 149/362 (41%), Gaps = 87/362 (24%)
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
N+ I AD++ + ++ L G+ D I W D++ IE D +G+
Sbjct: 1165 NKPRIERADMDGNNR----MTLIKDNLGWPNGITVDRPTSRIIWNDAKTEVIECSDFSGS 1220
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW--------------------GENPR--- 218
R +L + + P G+ + +++WTDW G+ R
Sbjct: 1221 ERRLLV-NAVPHPYGLTVSGD----FIYWTDWVQKGLSRADKLTGEGVEIVRGQMLRLME 1275
Query: 219 ----------------------IERIGMDGSNRSTIISTKIYWPNGLTLDIATRR--VYF 254
I RI MD + +I N + +D R Y+
Sbjct: 1276 VRAVHLTERMPEVFLLFAVRGSIRRISMDTKDHVDVIVDLPDLHNPIAVDFHFDRGLFYY 1335
Query: 255 ADSKLDFIDCKSL-----EIKTNVNYST--------IFRKLYWIDEGGNGVPLKIGKANM 301
D D I SL E+ + + ST + LYW D G N + + +
Sbjct: 1336 TDVYADVIRRASLNGSFSEVVVDADLSTADGIAVDWLADNLYWTDTGRNTIEV----TRL 1391
Query: 302 DGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNR 359
DGS+ ILVS + E ++A+ + G++ FWTDWG P+IE+ +DGS+R
Sbjct: 1392 DGSSRRILVSRNVDEPRSIAVHPQKGLM-----------FWTDWGSTPKIEKAFLDGSSR 1440
Query: 360 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLM 419
T++ + WPNGL +D R+Y+ D+ LD I+ + +G R ++ + + F+ L
Sbjct: 1441 HTVVQESLVWPNGLCIDYEADRLYWVDANLDCIETSDLNGGHRAKLAAV-VQHPFSLTLY 1499
Query: 420 GD 421
GD
Sbjct: 1500 GD 1501
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 142/340 (41%), Gaps = 54/340 (15%)
Query: 128 VADLEEKGKDHRAQDIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL 186
V +E G D + ++V + GLA D+ G +YW+D+ RIE C+ +GT R V+
Sbjct: 854 VPKIERAGMDGSQRSVLVEHNITWPNGLAIDYGSGRLYWVDAAEKRIEACNLDGTQRSVI 913
Query: 187 AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI--------GMDGSNRSTIISTKIY 238
+ + P + L ++WTDW + I G+ N ++ +++
Sbjct: 914 LSEGLQHPFSLTLFDDE----MYWTDW-QTKSIHYANKITGRGGGILRGNLENLMDIQMF 968
Query: 239 WPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGK 298
+ T+ S L + S ++ T V +S G+ L
Sbjct: 969 HRDRNTIATPCHHDNGGCSHLCLLS-PSGDVSTPVTHSCAC---------PTGILLNSDG 1018
Query: 299 ANMDGSNASILVSGQLYEALALDLENGMLYYSTL----------------KCTRWLFWTD 342
S LV + E A+ L+ + Y++ + + ++W+D
Sbjct: 1019 KTCQPEMTSFLVVARRTEIRAISLD--VDYFADVIIPLGKHGNAVAVDVDLVEKKIYWSD 1076
Query: 343 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
+ +I R +DGS +I + I P+GL +D R++Y++D+ D I+ DGT R
Sbjct: 1077 -TVHEKIMRANLDGSAIEDVIVSGISTPDGLAVDSTGRKIYWSDTDTDRIEVATLDGTMR 1135
Query: 403 QQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ ++ +L + A+ L+ ++G+++++ G
Sbjct: 1136 KVLVWSNL-----------DKPRAITLNYDHGLIFWTDWG 1164
>gi|212645014|ref|NP_491270.2| Protein LRP-2 [Caenorhabditis elegans]
gi|351063245|emb|CCD71369.1| Protein LRP-2 [Caenorhabditis elegans]
Length = 4858
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 151/309 (48%), Gaps = 54/309 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGL-CSNTCHPTPLGALCTCPPGEILS 62
+C++ +CDG DC G DEG C C L CS+TC PTP+G +C+CP L
Sbjct: 1241 KCISDKHLCDGTNDCEEGDDEGLWCTF-NCTDADDLGCSHTCRPTPVGPICSCPDDHYLD 1299
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
+ VTC + C + G CSQ C+ S+ C C + + L D +C + + FLI SN
Sbjct: 1300 KNGVTCSKKDPC-RFGQCSQYCSPHGSSHFCYCEDSFKLGADRSSCISDDPRKPFLIYSN 1358
Query: 123 RHSILVADLEEKGK----------------------------------------DHRA-- 140
RH I + + G D R
Sbjct: 1359 RHEIRMIQSKYPGSLPMITNLVNAIALDFKYHQNGSVSIYWTDLSADKIYTGLVDQRTIL 1418
Query: 141 --QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
+ IV G+ EG+A DWI G+IYW+DS L+ I+V E+GT R + N+ R +
Sbjct: 1419 YQRTIVSYGVFNAEGIAVDWISGNIYWIDSFLDTIQVVSEDGTKRATVINQNMGNARSLA 1478
Query: 199 LDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTI--IS--TKIYWPNGLTLDIATRRVY 253
+D G ++FWTDW E NPRIER + G+NR+ I IS + WPNG+ LD +RVY
Sbjct: 1479 IDVEEG--FMFWTDWEESNPRIERASLAGNNRAIIWKISNIAQAGWPNGIALDTIAKRVY 1536
Query: 254 FADSKLDFI 262
+AD+K D I
Sbjct: 1537 WADAKSDSI 1545
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 172/427 (40%), Gaps = 112/427 (26%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNT---------CHPTPLGALCTC 55
C+ ++CDG+ DC +G DE +C + G CS+T C C+C
Sbjct: 3050 CLQEQQLCDGRRDCMSGIDE-------QCDNPQGNCSSTRNSCDQTWNCQRHAGFESCSC 3102
Query: 56 PPGEILSN-DSVTCQDMNECEQPGYCSQMCTNTKG-SYICSCNEGYVLEYDNHTCKAINH 113
G LS D TC C + CS C + + + C C GY+L + C+ +
Sbjct: 3103 DDGYHLSPYDKKTCLRSPSCPKAN-CSHFCIDRRDVGHQCFCAPGYILSENQKDCRRNDT 3161
Query: 114 SAAFLIISNRHSILVADLEEKGK-------------DHRAQDIVVSGLDL---------- 150
A +++ H + + ++ K D+ + +V D+
Sbjct: 3162 IEAEILMVYGHRLKLFTIDGHAKATLLSNLTNGVALDYDVKSDLVYWTDVAHDGNKAGIT 3221
Query: 151 -------------------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGT-NRIVLAKDN 190
++G+A DW+G +IY+ D + I VCD G NRI+L
Sbjct: 3222 SMSNQPNTYRVINSLPTKGIDGIAVDWLGRNIYYTDRNHDAIAVCDMRGRFNRILLKGTP 3281
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK-IYWPNGLTLDIAT 249
+ PR ++LDP +FWTDWG + I R+ MDGSN I+ + I WPN L +D
Sbjct: 3282 LNDPRAIVLDPLQA--LVFWTDWGASAHIGRMNMDGSNEQVILQDRTIRWPNALAVDAPA 3339
Query: 250 RRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL 309
+R+YF D+ D+ I N DGS ++
Sbjct: 3340 QRLYFGDAHRDY----------------------------------IASCNYDGSKRRMV 3365
Query: 310 VSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIY 368
+ G + AL + +++W+DW N IER+ + G+NR +I K Y
Sbjct: 3366 LRGSVRHIFALAVFED-----------YVYWSDW-HNHTIERVHKITGTNRKVLIQDKQY 3413
Query: 369 WPNGLTL 375
P G +
Sbjct: 3414 RPMGFKI 3420
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 21/153 (13%)
Query: 123 RHSILVADLEEKGKDHRAQDIVVSGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCD-E 178
RHS++V + + + V GL + EG+AYD+ ++Y D R I V
Sbjct: 649 RHSLVVQKIG-------STNYTVHGLTGIMNCEGMAYDFTSDNLYMTDQRRKIITVQRLS 701
Query: 179 NGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN--------PRIERIGMDGSNRS 230
N + + V+ N++ PR + + + +LFW W E+ IER +DGS R
Sbjct: 702 NLSIQKVVVSGNMSNPRAIAIHIAKS--YLFWGSWNEDNNDDEKIPAMIERSKLDGSERK 759
Query: 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
T++S W NGLTLD+ +Y+ D+ + I+
Sbjct: 760 TLVSKNAMWINGLTLDLKNDYLYWCDAYRNVIE 792
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 101/250 (40%), Gaps = 57/250 (22%)
Query: 169 RLNRIEVC--DENGTNRIVLAKD--NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGM 224
R +RI++ D+N I+ D N+ +P M DP G + L + + +++IG
Sbjct: 601 RPSRIKILGFDKNYRTEIIGVSDLLNVKRPSAMTFDPK-GEQLLMYDLRRHSLVVQKIG- 658
Query: 225 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYW 284
+N + T I G+ D + +Y D + RK+
Sbjct: 659 -STNYTVHGLTGIMNCEGMAYDFTSDNLYMTDQR---------------------RKIIT 696
Query: 285 IDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWG 344
+ N L I K ++VSG + A+ + Y LFW W
Sbjct: 697 VQRLSN---LSIQK---------VVVSGNMSNPRAIAIHIAKSY---------LFWGSWN 735
Query: 345 EN--------PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
E+ IER +DGS R T++S W NGLTLD+ +Y+ D+ + I+
Sbjct: 736 EDNNDDEKIPAMIERSKLDGSERKTLVSKNAMWINGLTLDLKNDYLYWCDAYRNVIERIR 795
Query: 397 YDGTGRQQVI 406
++G R+ V+
Sbjct: 796 WNGADREVVV 805
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 118/296 (39%), Gaps = 62/296 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTC-HPTPLGALCTCPPGEILS 62
RC++++ CDG+ DC +G+DE AEC H FG+C+ C A C C PG +
Sbjct: 3889 RCIDVSARCDGRDDCGDGSDEDTC--GAEC-HHFGVCAQKCWMAFNHTARCHCAPGYART 3945
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
+ D NECE ++M +I + N +++ +N + F I N
Sbjct: 3946 KN-----DENECEPLSKSAEM-------FITNGNRLHLMSLENSQVSVLR--PVFNIKMN 3991
Query: 123 -----------------RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLA----YDWIGG 161
+++ + + + + D ++ E A YD++
Sbjct: 3992 LIPGGIDFGYDVFRTTLMYTVGIGNSRVDIRSKKWSDGLIGSWGEEESTAGLITYDFMHN 4051
Query: 162 HIYWLD-SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS---------PGTRWLFWT 211
++Y+ + S NR + D + AKD T R ++++ + P R +FWT
Sbjct: 4052 NVYFTESSEQNRGVLFDRQANIYVAKAKD--TSTRTLIVNSTGTINSLAVDPIKRLIFWT 4109
Query: 212 DWGENPRIERIGMDG-----------SNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
PRI +DG ++ I+ P + LD + R+Y+ D
Sbjct: 4110 TSAPVPRILSANLDGKPIAQPFKTGSQPHKALVERNIFEPTSMVLDFSNERLYWID 4165
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 18/178 (10%)
Query: 242 GLTLDIATRRVYFAD------SKLDF------IDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+T D R+YFAD + ++F + + + + ++ Y + +LY++
Sbjct: 2353 AVTADATRGRIYFADYDKFRITAVNFDGTGCVVIAEDVGVVPSMAYDEVHTELYFV---- 2408
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWG-ENPR 348
P I + N+ +N + + L L + + + + C LF+T+
Sbjct: 2409 RANPASIWRINVADNNLESYPT-EPKIVLTLTVRDRPRHIAIHPCRMLLFFTNNAITGSV 2467
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
IER+ G R I+ ++ GLT+D+ + ++YF+DSK I C++DG+ R+ V+
Sbjct: 2468 IERVYFSGFKRDQIVQEDLHDLRGLTIDLDSEKLYFSDSKDFKISRCDFDGSHRELVV 2525
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+CV L K CDGK DC +G+DE C + + K C T G C CP + L N
Sbjct: 142 QCVPLFKFCDGKRDCSDGSDEHSMCHVEDPKTA-DSCEYGAAMTIDGIKCYCPKNKFL-N 199
Query: 64 DSVTCQDMNECEQ-----PGYCSQMCTNTK-GSYICSC 95
+ C+ +N CE+ P CSQ CT+ K G++ CSC
Sbjct: 200 EQGKCEFVNHCERTKNGLPPVCSQDCTDNKNGTFTCSC 237
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 114/281 (40%), Gaps = 74/281 (26%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWL---DSRLNRIEVCDENGTN-----RIVLAKDNITQP 194
++ + +V +AYD + +Y++ + + RI V D N + +IVL +P
Sbjct: 2385 VIAEDVGVVPSMAYDEVHTELYFVRANPASIWRINVADNNLESYPTEPKIVLTLTVRDRP 2444
Query: 195 RGMMLDPSPGTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
R + + P LF+T+ IER+ G R I+ ++ GLT+D+ + ++Y
Sbjct: 2445 RHIAIHPC--RMLLFFTNNAITGSVIERVYFSGFKRDQIVQEDLHDLRGLTIDLDSEKLY 2502
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG- 312
F+DSK DF KI + + DGS+ ++VS
Sbjct: 2503 FSDSK-DF---------------------------------KISRCDFDGSHRELVVSNT 2528
Query: 313 -----QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGS-NRSTIISTK 366
+E D E + +TDW + + GS NR+ +T
Sbjct: 2529 DIPSIHPFELSIYDDE--------------IIFTDWVRRSVVGVNKITGSDNRNINRATD 2574
Query: 367 IYWPNGLTLDIATRRVY-----FADSKLDFIDFCNYDGTGR 402
+ P GL + + T+R Y AD++L D+C G+
Sbjct: 2575 V--PVGLVV-VDTKREYCTSDACADNELKCEDYCRLMANGQ 2612
>gi|332853025|ref|XP_003316161.1| PREDICTED: low-density lipoprotein receptor [Pan troglodytes]
Length = 692
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 153/301 (50%), Gaps = 47/301 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 121 CITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVA 180
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
C+D++EC+ P CSQ+C N +G Y C C EG+ L+ CKA+ S A+L +NR
Sbjct: 181 QR-RCEDIDECQHPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG-SIAYLFFTNR 238
Query: 124 HSI------------LVADLE-----------------------------EKGKDHRAQD 142
H + L+ +L ++ + D
Sbjct: 239 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD 298
Query: 143 IVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
V+S + +GLA DWI +IYW DS L + V D G R L ++N ++PR +++DP
Sbjct: 299 TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDP 358
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL
Sbjct: 359 VHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 416
Query: 262 I 262
I
Sbjct: 417 I 417
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLD 200
+V + G+ D + G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 387 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTVLEDEKRLAHPFSLAVF 446
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 447 EDK----VFWTD 454
>gi|45382563|ref|NP_990560.1| very low-density lipoprotein receptor precursor [Gallus gallus]
gi|1730110|sp|P98165.1|VLDLR_CHICK RecName: Full=Very low-density lipoprotein receptor; Short=VLDL
receptor; Short=VLDL-R; AltName: Full=Vitellogenin
receptor; Short=VTG receptor; Flags: Precursor
gi|609266|emb|CAA56505.1| chicken very low density lipoprotein (VLDL)/vitellogenin receptor
[Gallus gallus]
Length = 863
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 166/338 (49%), Gaps = 59/338 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+++ KVC+ DC + +DE C++ EC G CS+ C +G C CP G L
Sbjct: 348 ECIDINKVCNHHGDCKDWSDEPLKECNINECLVNNGGCSHICRDLVIGYECDCPAGFELV 407
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ LI +N
Sbjct: 408 -DRRTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPC-LIFTN 465
Query: 123 RHSI----------------------LVADLEEKG---KDHRAQDIVVSGLDLVE----- 152
R I L AD+ E+ D + I + +D +
Sbjct: 466 RRDIRKIGLERKEYIQLVEQLRNTVALDADIAEQKLYWADFSQKAIFSASIDTRDKVGTH 525
Query: 153 -----------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
G+A DWI +IYW DS I V NG R VL + +P + +DP
Sbjct: 526 TRILDNIHSPAGIAVDWIYKNIYWTDSSAKTISVASLNGKKRKVLFLSELREPASIAVDP 585
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++W+DWGE +IE+ GM+G +R +++T+I WPNG+ LD+ R+Y+ DSKL
Sbjct: 586 LSG--FMYWSDWGEPAKIEKAGMNGFDRQQLVTTEIQWPNGIALDLVKSRLYWLDSKLHM 643
Query: 262 IDC-------KSLEIKTNVNYS-----TIFR-KLYWID 286
+ + L +K+++ TIF +++WID
Sbjct: 644 LSSVDLNGQDRRLVLKSHMFLPHPLALTIFEDRVFWID 681
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 102/206 (49%), Gaps = 34/206 (16%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST- 277
I +IG++ ++ ++ L DIA +++Y+AD I S++ + V T
Sbjct: 469 IRKIGLERKEYIQLVE-QLRNTVALDADIAEQKLYWADFSQKAIFSASIDTRDKVGTHTR 527
Query: 278 ---------------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALAL 320
I++ +YW D + + A+++G +L +L E ++A+
Sbjct: 528 ILDNIHSPAGIAVDWIYKNIYWTDSSAKTISV----ASLNGKKRKVLFLSELREPASIAV 583
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
D +G +Y W+DWGE +IE+ GM+G +R +++T+I WPNG+ LD+
Sbjct: 584 DPLSGFMY-----------WSDWGEPAKIEKAGMNGFDRQQLVTTEIQWPNGIALDLVKS 632
Query: 381 RVYFADSKLDFIDFCNYDGTGRQQVI 406
R+Y+ DSKL + + +G R+ V+
Sbjct: 633 RLYWLDSKLHMLSSVDLNGQDRRLVL 658
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q +V + + G+A D + +YWLDS+L+ + D NG +R ++ K ++ P + L
Sbjct: 612 QQLVTTEIQWPNGIALDLVKSRLYWLDSKLHMLSSVDLNGQDRRLVLKSHMFLPHPLAL- 670
Query: 201 PSPGTRWLFWTDWGENPRI 219
+ +FW D GEN +
Sbjct: 671 -TIFEDRVFWID-GENEAV 687
>gi|359322232|ref|XP_003432899.2| PREDICTED: low-density lipoprotein receptor [Canis lupus
familiaris]
Length = 847
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 155/302 (51%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 274 ECITLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKVGHECLCPEGFQLV 333
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC+ P CSQ+C N +GSY C C EG+ L+ CKA+ + A+L +N
Sbjct: 334 -DQRRCEDIDECQDPDVCSQLCVNLEGSYKCECEEGFQLDPHTKACKAVGN-IAYLFFTN 391
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L+ ++ +
Sbjct: 392 RHEVRKMTLDRTEYTSLIPNLKNVVALDTEVASNRIYWSDLSQRKIYSTQIDRAPSFSSY 451
Query: 142 DIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D V+S L +GLA DWI G+IYW DS L + V D G R L K+ ++PR +++D
Sbjct: 452 DTVISEDLQAPDGLAVDWIHGNIYWTDSILGTVSVADTKGAKRKTLFKEKGSKPRAIVVD 511
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WT+WG I++ G++G + ++++ I WPNG+TLD++ R+Y+ DSKL
Sbjct: 512 PVHG--FMYWTNWGTPAEIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLH 569
Query: 261 FI 262
I
Sbjct: 570 SI 571
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 170/420 (40%), Gaps = 86/420 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC---DLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
C++ ++ CD + DC + +DE GC L E +KF S C L +C
Sbjct: 234 CIHGSRQCDKEYDCKDMSDE-IGCINVTLCEGPNKFKCHSGEC--ITLDKVC-------- 282
Query: 62 SNDSVTCQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110
N C+D NEC + G CS +C + K + C C EG+ L D C+
Sbjct: 283 -NSVRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKVGHECLCPEGFQL-VDQRRCED 340
Query: 111 INHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL 170
I+ + S L + + ++ D V +AY +++ +
Sbjct: 341 IDECQDPDVCSQLCVNLEGSYKCECEEGFQLDPHTKACKAVGNIAY------LFFTNRHE 394
Query: 171 NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE----NPRIERIGMDG 226
R D ++ N+ + LD + ++W+D + + +I+R
Sbjct: 395 VRKMTLDRTEYTSLIPNLKNV-----VALDTEVASNRIYWSDLSQRKIYSTQIDR-APSF 448
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWID 286
S+ T+IS + P+GL +D +Y+ DS L + S+ T+F++
Sbjct: 449 SSYDTVISEDLQAPDGLAVDWIHGNIYWTDSILGTV---SVADTKGAKRKTLFKE----- 500
Query: 287 EGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
G A+ +D +G +Y WT+WG
Sbjct: 501 ------------------------KGSKPRAIVVDPVHGFMY-----------WTNWGTP 525
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I++ G++G + ++++ I WPNG+TLD++ R+Y+ DSKL I + +G R+ ++
Sbjct: 526 AEIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSIDVNGGNRKTIL 585
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLAKDNITQPRGMMLD 200
+V + G+ D GG +YW+DS+L+ I D NG NR I+ K + P + +
Sbjct: 541 LVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSIDVNGGNRKTILEDKKKLAHPFSLAIF 600
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 601 EDK----IFWTD 608
>gi|343409582|gb|AEM23935.1| very low density lipoprotein receptor transcript variant 2 [Anas
platyrhynchos]
Length = 851
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 115/363 (31%), Positives = 174/363 (47%), Gaps = 62/363 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+++ KVC+ + DC + +DE C++ EC G CS+ C +G C CP G L
Sbjct: 335 ECIDINKVCNQQRDCKDWSDEPLKECNINECLVNNGGCSHICRDFIIGYECDCPAGFELV 394
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ LI +N
Sbjct: 395 -DKRTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPC-LIFTN 452
Query: 123 RHSI----------------------LVADLEEKG---KDHRAQDIVVSGLDLVE----- 152
R I L AD+ E+ D + I + +D +
Sbjct: 453 RRDIRKIGLERKEYIQLVEQLRNTVALDADIAEQKLYWADFSQKAIFSASIDTRDKVGTH 512
Query: 153 -----------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
G+A DW+ +IYW DS I V +G R VL + +P + +DP
Sbjct: 513 IRILDNIHSPAGIAVDWVYKNIYWTDSAAKTISVASLDGRKRKVLFLSELREPASIAVDP 572
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++W+DWGE +IE+ GM+G +R +++T+I WPNG+ LD+ R+Y+ DSKL
Sbjct: 573 LSG--FMYWSDWGEPAKIEKAGMNGFDRQQLVTTEIQWPNGIALDLVKSRLYWLDSKLHM 630
Query: 262 IDC-------KSLEIKTNVNYS-----TIFR-KLYWIDEGGNGVPLKIGKANMDGSNASI 308
+ + L +K+++ TIF ++YWID V G GS
Sbjct: 631 LSSIDLNGQDRRLVLKSHMFLPHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELVT 687
Query: 309 LVS 311
LV+
Sbjct: 688 LVN 690
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 101/206 (49%), Gaps = 34/206 (16%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST- 277
I +IG++ ++ ++ L DIA +++Y+AD I S++ + V
Sbjct: 456 IRKIGLERKEYIQLVE-QLRNTVALDADIAEQKLYWADFSQKAIFSASIDTRDKVGTHIR 514
Query: 278 ---------------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALAL 320
+++ +YW D + + A++DG +L +L E ++A+
Sbjct: 515 ILDNIHSPAGIAVDWVYKNIYWTDSAAKTISV----ASLDGRKRKVLFLSELREPASIAV 570
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
D +G +Y W+DWGE +IE+ GM+G +R +++T+I WPNG+ LD+
Sbjct: 571 DPLSGFMY-----------WSDWGEPAKIEKAGMNGFDRQQLVTTEIQWPNGIALDLVKS 619
Query: 381 RVYFADSKLDFIDFCNYDGTGRQQVI 406
R+Y+ DSKL + + +G R+ V+
Sbjct: 620 RLYWLDSKLHMLSSIDLNGQDRRLVL 645
>gi|354459530|pdb|3P5C|L Chain L, The Structure Of The LdlrPCSK9 COMPLEX REVEALS THE
RECEPTOR IN AN Extended Conformation
Length = 440
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 153/302 (50%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 13 ECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLV 72
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
C+D++EC+ P CSQ+C N +G Y C C EG+ L+ CKA+ S A+L +N
Sbjct: 73 AQR-RCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG-SIAYLFFTN 130
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L ++ +
Sbjct: 131 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY 190
Query: 142 DIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D V+S + +GLA DWI +IYW DS L + V D G R L ++N ++PR +++D
Sbjct: 191 DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVD 250
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL
Sbjct: 251 PVHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 308
Query: 261 FI 262
I
Sbjct: 309 SI 310
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLD 200
+V + G+ D + G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 280 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF 339
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 340 EDK----VFWTD 347
>gi|27806193|ref|NP_776914.1| very low-density lipoprotein receptor precursor [Bos taurus]
gi|4128201|gb|AAD03484.1| very low density lipoprotein receptor VLDL-R2 [Bos taurus]
gi|296484785|tpg|DAA26900.1| TPA: very low-density lipoprotein receptor precursor [Bos taurus]
Length = 845
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 173/362 (47%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ K DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDISKVCNQKQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECYCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQ------------------DIVVSGL 148
NR I LE K D AQ D VV +
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVVRHV 506
Query: 149 DLVE------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+++ +A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRALVTADIQWPNGITLDLIKGRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 290 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQKQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 350 EPLKECHVNECLVNN-------------GGCSHICKDLVIGYECYCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCKA-VGKEPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVV 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 534 SKTISV----ATLDGTKRKFLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRALVTADIQWPNGITLDLIKGRLYWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|54036090|sp|Q28832.2|LDLR_PIG RecName: Full=Low-density lipoprotein receptor; Short=LDL receptor
Length = 811
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 168/339 (49%), Gaps = 60/339 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 259 ECISLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKIGYECLCPEGFQLV 318
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC+ P CSQ+C N +GSY C C EG+ LE CKAI + A+L +N
Sbjct: 319 -DKHRCEDIDECQDPDACSQICVNLEGSYKCQCEEGFQLEPLTKACKAIG-TIAYLFFTN 376
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L+ ++ +
Sbjct: 377 RHEVRKMTLDRSEYTSLIPNLKNVVALDTEVASNRIYWSDLSQRKIYSTQIDRAPSFSSY 436
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D ++ L +GLA DWI +IYW DS L + V D G R L ++ ++PR +++D
Sbjct: 437 DTIIGEDLQAPDGLAVDWIHSNIYWTDSILGTVSVADTKGVKRKTLFQEKGSKPRAIVVD 496
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD++ R+Y+ DSKL
Sbjct: 497 PVHG--FMYWTDWGTPAKIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLH 554
Query: 261 FIDC---------KSLEIKTNVNYS---TIFR-KLYWID 286
I LE KT + + IF K++W D
Sbjct: 555 SISSIDVNGGNRKTVLEDKTKLAHPFSLAIFEDKVFWTD 593
>gi|307775416|ref|NP_001182729.1| low-density lipoprotein receptor isoform 4 precursor [Homo sapiens]
gi|194386604|dbj|BAG61112.1| unnamed protein product [Homo sapiens]
Length = 692
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 153/301 (50%), Gaps = 47/301 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 121 CITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVA 180
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
C+D++EC+ P CSQ+C N +G Y C C EG+ L+ CKA+ S A+L +NR
Sbjct: 181 QR-RCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG-SIAYLFFTNR 238
Query: 124 HSI------------LVADLE-----------------------------EKGKDHRAQD 142
H + L+ +L ++ + D
Sbjct: 239 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD 298
Query: 143 IVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
V+S + +GLA DWI +IYW DS L + V D G R L ++N ++PR +++DP
Sbjct: 299 TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDP 358
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL
Sbjct: 359 VHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 416
Query: 262 I 262
I
Sbjct: 417 I 417
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLD 200
+V + G+ D + G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 387 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF 446
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 447 EDK----VFWTD 454
>gi|329744622|ref|NP_001193283.1| low-density lipoprotein receptor precursor [Sus scrofa]
Length = 845
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 168/339 (49%), Gaps = 60/339 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 290 ECISLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKIGYECLCPEGFQLV 349
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC+ P CSQ+C N +GSY C C EG+ LE CKAI + A+L +N
Sbjct: 350 -DKHRCEDIDECQDPDACSQICVNLEGSYKCQCEEGFQLEPLTKACKAIG-TIAYLFFTN 407
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L+ ++ +
Sbjct: 408 RHEVRKMTLDRSEYTSLIPNLKNVVALDTEVASNRIYWSDLSQRKIYSTQIDRAPSFSSY 467
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D ++ L +GLA DWI +IYW DS L + V D G R L ++ ++PR +++D
Sbjct: 468 DTIIGEDLQAPDGLAVDWIHSNIYWTDSILGTVSVADTKGVKRKTLFQEKGSKPRAIVVD 527
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD++ R+Y+ DSKL
Sbjct: 528 PVHG--FMYWTDWGTPAKIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLH 585
Query: 261 FIDC---------KSLEIKTNVNYS---TIFR-KLYWID 286
I LE KT + + IF K++W D
Sbjct: 586 SISSIDVNGGNRKTVLEDKTKLAHPFSLAIFEDKVFWTD 624
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 182/449 (40%), Gaps = 103/449 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSN-TC-HPTPL------------ 49
C++ + CDG TDC + +DE CD+A C+ CS+ TC H +
Sbjct: 210 ECIHSSWRCDGDTDCKDKSDE-ENCDVATCRPDEFQCSDGTCIHGSRQCDREYDCKDMSD 268
Query: 50 ------GALC------TCPPGEILSNDSVT-----CQD----------MNEC-EQPGYCS 81
LC C GE +S D V C+D NEC + G CS
Sbjct: 269 EQGCVNATLCEGPNKFKCQSGECISLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCS 328
Query: 82 QMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQ 141
+C + K Y C C EG+ L D H C+ I+ S L + + ++
Sbjct: 329 HICNDLKIGYECLCPEGFQL-VDKHRCEDIDECQDPDACSQICVNLEGSYKCQCEEGFQL 387
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+ + + +AY +++ + R D + ++ N+ + LD
Sbjct: 388 EPLTKACKAIGTIAY------LFFTNRHEVRKMTLDRSEYTSLIPNLKNV-----VALDT 436
Query: 202 SPGTRWLFWTDWGE----NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+ ++W+D + + +I+R S+ TII + P+GL +D +Y+ DS
Sbjct: 437 EVASNRIYWSDLSQRKIYSTQIDR-APSFSSYDTIIGEDLQAPDGLAVDWIHSNIYWTDS 495
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
L + S+ V T+F++ G A
Sbjct: 496 ILGTV---SVADTKGVKRKTLFQE-----------------------------KGSKPRA 523
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
+ +D +G +Y WTDWG +I++ G++G + ++++ I WPNG+TLD+
Sbjct: 524 IVVDPVHGFMY-----------WTDWGTPAKIKKGGLNGVDVYSLVTEDIQWPNGITLDL 572
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ R+Y+ DSKL I + +G R+ V+
Sbjct: 573 SGGRLYWVDSKLHSISSIDVNGGNRKTVL 601
>gi|307775422|ref|NP_001182732.1| low-density lipoprotein receptor isoform 6 precursor [Homo sapiens]
gi|194382908|dbj|BAG59010.1| unnamed protein product [Homo sapiens]
Length = 682
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 153/301 (50%), Gaps = 47/301 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 162 CITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVA 221
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
C+D++EC+ P CSQ+C N +G Y C C EG+ L+ CKA+ S A+L +NR
Sbjct: 222 QR-RCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG-SIAYLFFTNR 279
Query: 124 HSI------------LVADLE-----------------------------EKGKDHRAQD 142
H + L+ +L ++ + D
Sbjct: 280 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD 339
Query: 143 IVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
V+S + +GLA DWI +IYW DS L + V D G R L ++N ++PR +++DP
Sbjct: 340 TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDP 399
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL
Sbjct: 400 VHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 457
Query: 262 I 262
I
Sbjct: 458 I 458
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLD 200
+V + G+ D + G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 428 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF 487
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 488 EDK----VFWTD 495
>gi|28461161|ref|NP_786938.1| low-density lipoprotein receptor precursor [Rattus norvegicus]
gi|547842|sp|P35952.1|LDLR_RAT RecName: Full=Low-density lipoprotein receptor; Short=LDL receptor;
Flags: Precursor
gi|56570|emb|CAA32001.1| unnamed protein product [Rattus norvegicus]
Length = 879
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 156/301 (51%), Gaps = 46/301 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L KVC+ DC + +DE C EC G CS+ C +G C CP G L
Sbjct: 289 ECISLDKVCNSARDCRDWSDEPIKECKTNECLDNNGGCSHICKDLKIGYECLCPSGFRLV 348
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC++P CSQ+C N +GS+ C C G+ ++ CKA+ S FL+ +N
Sbjct: 349 -DGHQCEDIDECQEPDTCSQLCVNLEGSFKCECRAGFHMDPHTRVCKAVG-SIGFLLFTN 406
Query: 123 RHSIL------------------VADLEEKGKDHR----------------------AQD 142
RH + V L+ + ++R + D
Sbjct: 407 RHEVRKMTLDRSEYTSLIPNLKNVVALDTEVANNRIYWSDLSQRKIYSAVMDQGTSLSYD 466
Query: 143 IVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++SG L +GLA DWI G+IYW DS + V D G R L ++ ++PR +++DP
Sbjct: 467 AIISGDLHAPDGLAVDWIHGNIYWTDSVPGTVSVADTKGVRRRTLFREKGSRPRAIVVDP 526
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL
Sbjct: 527 VHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTEDIQWPNGITLDLPSGRLYWVDSKLHS 584
Query: 262 I 262
I
Sbjct: 585 I 585
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 171/424 (40%), Gaps = 95/424 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC--KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ ++ CD + DC + +DE ++ +C +KF S C L +C
Sbjct: 249 CIHGSRQCDREHDCKDMSDELGCINVTQCDGPNKFKCHSGEC--ISLDKVC--------- 297
Query: 63 NDSVTCQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI 111
N + C+D NEC + G CS +C + K Y C C G+ L D H C+ I
Sbjct: 298 NSARDCRDWSDEPIKECKTNECLDNNGGCSHICKDLKIGYECLCPSGFRL-VDGHQCEDI 356
Query: 112 NHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN 171
+ + S L +LE K + G D
Sbjct: 357 DECQE----PDTCSQLCVNLEGSFK-----------CECRAGFHMD-------------P 388
Query: 172 RIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI-GMDGSNRS 230
VC G+ +L N + R M LD S T + P ++ + +D +
Sbjct: 389 HTRVCKAVGSIGFLLFT-NRHEVRKMTLDRSEYTSLI--------PNLKNVVALD----T 435
Query: 231 TIISTKIYWPNGLTLDIATRRVYFA------DSKLDFIDCKSLEIKTNVNYSTIFRKLYW 284
+ + +IYW D++ R++Y A D I L + I +YW
Sbjct: 436 EVANNRIYWS-----DLSQRKIYSAVMDQGTSLSYDAIISGDLHAPDGLAVDWIHGNIYW 490
Query: 285 IDEGGNGVPLKIGKANMDGSNASILV--SGQLYEALALDLENGMLYYSTLKCTRWLFWTD 342
D VP + A+ G L G A+ +D +G +Y WTD
Sbjct: 491 TD----SVPGTVSVADTKGVRRRTLFREKGSRPRAIVVDPVHGFMY-----------WTD 535
Query: 343 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
WG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL I + +G GR
Sbjct: 536 WGTPAKIKKGGLNGVDIYSLVTEDIQWPNGITLDLPSGRLYWVDSKLHSISSIDVNGGGR 595
Query: 403 QQVI 406
+ ++
Sbjct: 596 KTIL 599
>gi|348511569|ref|XP_003443316.1| PREDICTED: low-density lipoprotein receptor-related protein 1B
[Oreochromis niloticus]
Length = 4552
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 170/409 (41%), Gaps = 97/409 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+GK DC + +DEGP CDL C G CS+ C P G +C+CPPG L +
Sbjct: 1107 CLTPDKICNGKVDCADRSDEGPICDL--CLVARGGCSHQCTVAPGKGVVCSCPPGLHLDS 1164
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
+ TC+ ++ C + CSQ+C K + CSC G++L+ D +C + + AF+I S R
Sbjct: 1165 SNKTCEVVDYCSRHLKCSQVCEQYKTTVKCSCYPGWMLDSDGDSCHSTDPFEAFVIFSIR 1224
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1225 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNHSLLYWTDVVEDKIYRGKLSESGGVTGIE 1284
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGLA DWI G +YW+DS L++IEV NG R L + PR + LDP
Sbjct: 1285 VVVQHGLATPEGLAVDWITGKLYWIDSNLDQIEVAKLNGEMRTTLIAGGMEHPRAIALDP 1344
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIY--WPNGLTLDIATRRVYFADSK 258
G LFWTDW PRIE M G R + WPNGLTLD +R+ + D++
Sbjct: 1345 GQGI--LFWTDWDATFPRIEAASMSGGGRHIVFKDMEIGAWPNGLTLDHLEKRIVWTDAR 1402
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--E 316
D IF LY DG+ ++ G Y
Sbjct: 1403 SD----------------AIFSALY------------------DGTGVIEILRGHEYLSH 1428
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ L G +Y WTDW N G N + I T
Sbjct: 1429 PFAVSLFGGSVY-----------WTDWRTNTLARANKWTGQNVTVIQKT 1466
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 150/273 (54%), Gaps = 17/273 (6%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C++ K+C+G DC +G DEG C +L H+ C C T G C C G +
Sbjct: 77 KCIHFNKLCNGARDCEDGYDEGVHCRELLSACHEL-RCRYGCVMTRNGTFCFCADGFEVG 135
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN---HSAAFLI 119
D +C+D +EC G CSQ CTNT GSY CSC EGY+L+ + +CKA S L+
Sbjct: 136 EDGTSCRDHDECAMYGACSQTCTNTYGSYRCSCTEGYILQPNRISCKAKQDPGDSRPALL 195
Query: 120 ISNRHSILVADLEEKGKDHRAQDIVVSG---LDL------VEGLAYDWIGGHIYWLDSRL 170
I I+V L G + + V+G LD VE +A DW+ G+ Y++D
Sbjct: 196 IGGSDRIVVTHLNGSGL-QPLRSLRVNGTLALDFQHNQENVEQMAIDWLTGNFYFVDRVT 254
Query: 171 NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS 230
++I VCD G + + + ++ P+G+ LDP G LF+TD+G ++ER MDG+NR+
Sbjct: 255 DKIFVCDRGGDTCVTVLQLDLLNPKGIALDPLMGM--LFFTDYGNVAKVERCNMDGTNRT 312
Query: 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
++ KI P + LD+ + VY+AD+ LD+ID
Sbjct: 313 RLVDYKIEQPTAVALDVVKKLVYWADAYLDYID 345
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 163/367 (44%), Gaps = 55/367 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC++ +CDGK DC + +DE C++ EC + C+ C P+G C C PG L
Sbjct: 2859 RCISQGNLCDGKDDCGDRSDE-RNCNVNECLNRRVSGCTQDCQDLPVGYKCKCWPGFYLK 2917
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY-VLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GSY C C +GY LE + +TCKA++ FLI++
Sbjct: 2918 DDGRTCVDVDECSTTLPCSQRCINTYGSYKCLCVDGYEALERNPNTCKALSAEEPFLIMA 2977
Query: 122 NRHSIL---------------------------------VADLEEKGKDHRAQDIVVSGL 148
+ H I V G+ + S L
Sbjct: 2978 DHHEIRKLSVDGSNYTILKQGLYNIIHLDFDYKKEFIYWVDSTRPSGRKINRMRLNGSDL 3037
Query: 149 DLVE------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V LA DWIG ++YW D+ +EV NG VL + P + LDP
Sbjct: 3038 KIVHRTAVPSALAVDWIGKNLYWCDAEKKTMEVSKANGLYPTVLISSGLKNPTDLALDPQ 3097
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G ++FW D + P I RIGMDG ++ II T+IY P LT+D +R+Y+AD
Sbjct: 3098 TG--YIFWVDCCDPPHIGRIGMDGRGQTVIIDTEIYSPTALTIDYTNKRLYWADDNHILF 3155
Query: 263 DCKSLEIKTNVNYS--------TIFRK-LYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+ V+Y T+F +YW D G L+ +L S Q
Sbjct: 3156 ATMDGAQRRKVSYDHIQGVMALTLFEDFVYWTD--GKSKSLRRAHKTTGAQGIELLNSWQ 3213
Query: 314 LYEALAL 320
+++ +
Sbjct: 3214 AIKSIKV 3220
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 135/289 (46%), Gaps = 60/289 (20%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---------- 126
G CSQ+C T + + CSC GY L D +C+ ++ +FL+ S I
Sbjct: 1800 GGCSQLCFPTSENTRSCSCTVGYNLRSDRTSCEGVD---SFLMYSIHEGIRGIALDPNDN 1856
Query: 127 ------LVADLEEKGKDHRA-------------------------QDIVVSGLDLVEGLA 155
+ L G D A +D++ +G+ VEG+A
Sbjct: 1857 SEALMPITGTLFAVGVDFHAGNDTVYWTDMGLNRISRAKRDQTWREDVITTGISRVEGIA 1916
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G++YW D N IE+ NG R V+ + + QPR + + P G +LFWT+WG+
Sbjct: 1917 VDWIAGNLYWTDHGFNLIEISRLNGAYRSVVISEGLDQPRAIAVHPQKG--YLFWTEWGQ 1974
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEI------ 269
NP I R +DGS++ T++S+ I WPNG+++D +Y+ D++ D I+ +LE
Sbjct: 1975 NPCIGRSRLDGSDQVTLVSSGITWPNGISIDYEENTLYWCDARTDKIERINLETGESREI 2034
Query: 270 ---KTNVNYSTIF---RKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
NV+ ++ +YW D + ++ G + S A + SG
Sbjct: 2035 VLSMANVDLFSVAVFGPYIYWSDRAHSNGSIRRG-LKTEASEAVTMRSG 2082
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 113/248 (45%), Gaps = 57/248 (22%)
Query: 70 DMNECEQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII------- 120
+M+ +PG CS +C + + S C C GY L +D +CK + FL
Sbjct: 433 EMDSYGKPGGCSHICLLSGSYKSRTCRCRTGYSLGFDGMSCKKPKNDI-FLFYGKGRPGV 491
Query: 121 ----------SNRHSILVADL-EEKGKDHRAQ-------------------------DIV 144
S+ H + + DL + D+ A+ I+
Sbjct: 492 IRGLDMNIKSSDEHMVPIEDLVNPRAIDYHAELGHVYFADTTSFLIGRQKIDGSSRETIL 551
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDP 201
LD VEG++ DWIG ++YW + + + D R L + N++ PR +++DP
Sbjct: 552 KDELDNVEGISVDWIGNNLYWTNDGYRKTISVARLDRASQTRKTLLEGNMSHPRAIVVDP 611
Query: 202 SPGTRWLFWTDWGENP------RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
W++WTDW E+ RIER MDGSNR +++ + WPNGLTLD ++ +Y+
Sbjct: 612 L--NSWMYWTDWEEDEVNDSIGRIERAWMDGSNRRIFVTSNMLWPNGLTLDHSSSTMYWC 669
Query: 256 DSKLDFID 263
D+ D I+
Sbjct: 670 DAYYDHIE 677
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 126/326 (38%), Gaps = 69/326 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSN--TCHPTPLGALCTCPP 57
RC+ + CD +DC +G + C C K C C+ T ++C C P
Sbjct: 3731 RCIPIQLQCDLFSDCGDGGSDEQDCKAFSSGDVCGKKTNPCGEDAICNQTNANSICQCKP 3790
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY---------------VLE 102
G + + C++MNEC Q C C NTKGSY CSC+ + V
Sbjct: 3791 GFKRNQKTGQCEEMNECLQFDACPHYCVNTKGSYKCSCDRNFKEINGNCVARGPEERVFY 3850
Query: 103 YDNHT-----------------------------CKAINHSAAFLIIS--NRHSILVADL 131
N T + H F+ + N I D
Sbjct: 3851 VSNDTEIRSFLYPFNQSHGYRLPTHIEDNARIIGMDVLFHHQKFIWATQFNPGGIFYKDT 3910
Query: 132 EEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD-SRLN--------------RIEVC 176
E+ + + S ++ DWI G+IYW D SR++ I V
Sbjct: 3911 LERSQSKTNVRNICSDFRRPRDISADWITGNIYWTDHSRMHWFSYYTAHWTKLRYSINVG 3970
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 236
G N L D +P + ++P+ G ++W+ G++ +IE MDGS R ++
Sbjct: 3971 QLKGPNCTRLITDIAGEPYAIAVNPTRGM--MYWSVIGDHSQIEESAMDGSLRRVLLEKN 4028
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D +R+Y+AD +L I
Sbjct: 4029 LRRPTGLAIDYFNQRIYWADPELSQI 4054
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 34/208 (16%)
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS-----------KLDFI 262
++ I ++ +DGSN TI+ +Y L D +Y+ DS +L+
Sbjct: 2977 ADHHEIRKLSVDGSNY-TILKQGLYNIIHLDFDYKKEFIYWVDSTRPSGRKINRMRLNGS 3035
Query: 263 DCKSLE---IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA-- 317
D K + + + + I + LYW D +++ KAN G ++L+S L
Sbjct: 3036 DLKIVHRTAVPSALAVDWIGKNLYWCD--AEKKTMEVSKAN--GLYPTVLISSGLKNPTD 3091
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
LALD + G ++FW D + P I RIGMDG ++ II T+IY P LT+D
Sbjct: 3092 LALDPQTG-----------YIFWVDCCDPPHIGRIGMDGRGQTVIIDTEIYSPTALTIDY 3140
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+R+Y+AD + I F DG R++V
Sbjct: 3141 TNKRLYWADD--NHILFATMDGAQRRKV 3166
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 5/117 (4%)
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
LF+TD+G ++ER MDG+NR+ ++ KI P + LD+ + VY+AD+ LD+ID +Y
Sbjct: 290 LFFTDYGNVAKVERCNMDGTNRTRLVDYKIEQPTAVALDVVKKLVYWADAYLDYIDVVDY 349
Query: 398 DGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKTPLFCIT 454
G R +I + + + ++ + A+ D G + AE L+ F IT
Sbjct: 350 QGKNRHTIIHGSQVSYIYSLAVFEDYLYAIHSDPSKG-----SSSAELLQIHRFNIT 401
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E P I R + G N +IS+ I PNGLT+D ++YF+D L
Sbjct: 2284 ECQSLMFWTNWNEQRPSIMRSTLTGKNIRIVISSDILTPNGLTIDHKAEKLYFSDGTLGK 2343
Query: 392 IDFCNYDGTGRQQVI 406
I+ C+YDG+ R +I
Sbjct: 2344 IERCDYDGSSRYVII 2358
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 124/281 (44%), Gaps = 32/281 (11%)
Query: 69 QDMNECEQ---PGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
Q N CE+ G CS +C N + C+C L + +C A+ FL+ R
Sbjct: 1483 QVPNPCEKNDGRGPCSHLCLINYNRTASCTCPHLMKLSTNKQSCFALKR---FLLYVRRS 1539
Query: 125 SILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
I D+++ + + V +D V + YD IYW D + I+ NGT
Sbjct: 1540 EIRGVDIDDPYMNVMTA-LTVPDIDDVTVVDYDSQEERIYWADIKTQTIKRAFINGTQLE 1598
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ +I RG+ LD ++ L+W + + +I DGS +++II I P L
Sbjct: 1599 TVISLDIVNCRGLALDWL--SKNLYWLSSENDESQINVARFDGSLKTSIIH-GIDKPRCL 1655
Query: 244 TLDIATRRVYFAD------SKLDFIDCKSLE------IKTNVNYSTIFRKLYWIDEGGNG 291
+ A ++Y+ D + +D + K L + +++Y+ KLYWI NG
Sbjct: 1656 VVHPAKGKIYWTDGNTINMANMDGSNSKVLHQNQRDPVGLSIDYAA--NKLYWI-SSTNG 1712
Query: 292 VPLKIGKANMDGSNASIL--VSGQLYEALALDLENGMLYYS 330
I + N+DGS +L + +L + AL + G L+++
Sbjct: 1713 T---INRCNLDGSGLEVLETLKRELAKGTALAVMGGKLWWA 1750
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI--EVCDENGTNR 183
+ +++ D + ++ + VEGLAY +YW S + I + D++
Sbjct: 2203 VHFGNIQMINDDWTGRSVIAENVGSVEGLAYHKGWDTLYWTSSTTSTITRQTVDQSQAGA 2262
Query: 184 I----VLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIY 238
I V+ P + LD +FWT+W E P I R + G N +IS+ I
Sbjct: 2263 ISRQAVVTLSEEDHPHVLALDECQSL--MFWTNWNEQRPSIMRSTLTGKNIRIVISSDIL 2320
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGLT+D ++YF+D L I+
Sbjct: 2321 TPNGLTIDHKAEKLYFSDGTLGKIE 2345
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 135/347 (38%), Gaps = 66/347 (19%)
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
++ G+D L G IYW D N I + + +G+N VL + N P G+ +D +
Sbjct: 1645 IIHGIDKPRCLVVHPAKGKIYWTDG--NTINMANMDGSNSKVLHQ-NQRDPVGLSIDYAA 1701
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI- 262
L+W N I R +DGS + + K G L + ++++AD + +
Sbjct: 1702 NK--LYWIS-STNGTINRCNLDGSGLEVLETLKRELAKGTALAVMGGKLWWADEESGRLG 1758
Query: 263 -----DCKSLEIKTNVNYSTIFRKLY-----------WIDEGGN---------------- 290
D ++L + N + K+Y ++ GG
Sbjct: 1759 TVTKRDGRNLVVLRNKTGGVVHMKVYDRDSQKGRNPCQVNNGGCSQLCFPTSENTRSCSC 1818
Query: 291 --GVPLKIGKANMDGSNASILVS-GQLYEALALDLENGMLYYSTLKCTRW---------- 337
G L+ + + +G ++ ++ S + +ALD + + T +
Sbjct: 1819 TVGYNLRSDRTSCEGVDSFLMYSIHEGIRGIALDPNDNSEALMPITGTLFAVGVDFHAGN 1878
Query: 338 --LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
++WTD G N RI R D + R +I+T I G+ +D +Y+ D + I+
Sbjct: 1879 DTVYWTDMGLN-RISRAKRDQTWREDVITTGISRVEGIAVDWIAGNLYWTDHGFNLIEIS 1937
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+G R VI L + A+A+ + G L+++ G
Sbjct: 1938 RLNGAYRSVVISEGL-----------DQPRAIAVHPQKGYLFWTEWG 1973
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 34/196 (17%)
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
++W D + I+R ++G+ T+IS I GL LD ++ +Y+ S+ D
Sbjct: 1577 IYWADI-KTQTIKRAFINGTQLETVISLDIVNCRGLALDWLSKNLYWLSSENDESQINVA 1635
Query: 268 EIKTNVNYSTIFR--------------KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
++ S I K+YW D GN I ANMDGSN+ +L Q
Sbjct: 1636 RFDGSLKTSIIHGIDKPRCLVVHPAKGKIYWTD--GN----TINMANMDGSNSKVLHQNQ 1689
Query: 314 LYE-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
L++D LY W+ T N I R +DGS + + K G
Sbjct: 1690 RDPVGLSIDYAANKLY--------WISST----NGTINRCNLDGSGLEVLETLKRELAKG 1737
Query: 373 LTLDIATRRVYFADSK 388
L + ++++AD +
Sbjct: 1738 TALAVMGGKLWWADEE 1753
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 43/220 (19%)
Query: 236 KIYWPNGLTLDIATRRVYFADSKL------DFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+IYW + T I +R + ++L D ++C+ L + + + LYW+
Sbjct: 1576 RIYWADIKTQTI--KRAFINGTQLETVISLDIVNCRGLAL------DWLSKNLYWLSSEN 1627
Query: 290 NGVPLKIGKANMDGSNASILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ + + A DGS + ++ G L + G +Y W +
Sbjct: 1628 DESQINV--ARFDGSLKTSIIHGIDKPRCLVVHPAKGKIY--------------WTDGNT 1671
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I MDGSN S ++ P GL++D A ++Y+ S I+ CN DG+G + +L
Sbjct: 1672 INMANMDGSN-SKVLHQNQRDPVGLSIDYAANKLYWISSTNGTINRCNLDGSGLE--VLE 1728
Query: 409 DLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKT 448
L E AL + G L+++ E + L T
Sbjct: 1729 TLKRELAK---------GTALAVMGGKLWWADEESGRLGT 1759
>gi|410333803|gb|JAA35848.1| low density lipoprotein receptor [Pan troglodytes]
Length = 733
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 153/301 (50%), Gaps = 47/301 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 162 CITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVA 221
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
C+D++EC+ P CSQ+C N +G Y C C EG+ L+ CKA+ S A+L +NR
Sbjct: 222 QR-RCEDIDECQHPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG-SIAYLFFTNR 279
Query: 124 HSI------------LVADLE-----------------------------EKGKDHRAQD 142
H + L+ +L ++ + D
Sbjct: 280 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD 339
Query: 143 IVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
V+S + +GLA DWI +IYW DS L + V D G R L ++N ++PR +++DP
Sbjct: 340 TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDP 399
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL
Sbjct: 400 VHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 457
Query: 262 I 262
I
Sbjct: 458 I 458
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLD 200
+V + G+ D + G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 428 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTVLEDEKRLAHPFSLAVF 487
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 488 EDK----VFWTD 495
>gi|3153895|gb|AAC17444.1| low density lipoprotein receptor [Sus scrofa]
Length = 801
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 168/339 (49%), Gaps = 60/339 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 259 ECISLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKIGYECLCPEGFQLV 318
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC+ P CSQ+C N +GSY C C EG+ LE CKAI + A+L +N
Sbjct: 319 -DKHRCEDIDECQDPDACSQICVNLEGSYKCQCEEGFQLEPLTKACKAIG-TIAYLFFTN 376
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L+ ++ +
Sbjct: 377 RHEVRKMTLDRSEYTSLIPNLKNVVALDTEVASNRIYWSDLSQRKIYSTQIDRAPSFSSY 436
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D ++ L +GLA DWI +IYW DS L + V D G R L ++ ++PR +++D
Sbjct: 437 DTIIGEDLQAPDGLAVDWIHSNIYWTDSILGTVSVADTKGVKRKTLFQEKGSKPRAIVVD 496
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD++ R+Y+ DSKL
Sbjct: 497 PVHG--FMYWTDWGTPAKIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLH 554
Query: 261 FIDC---------KSLEIKTNVNYS---TIFR-KLYWID 286
I LE KT + + IF K++W D
Sbjct: 555 SISSIDVNGGNRKTVLEDKTKLAHPFSLAIFEDKVFWTD 593
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 182/449 (40%), Gaps = 103/449 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSN-TC-HPTPL------------ 49
C++ + CDG TDC + +DE CD+A C+ CS+ TC H +
Sbjct: 179 ECIHSSWRCDGDTDCKDKSDE-ENCDVATCRPDEFQCSDGTCIHGSRQCDREYDCKDMSD 237
Query: 50 ------GALC------TCPPGEILSNDSVT-----CQD----------MNEC-EQPGYCS 81
LC C GE +S D V C+D NEC + G CS
Sbjct: 238 EQGCVNATLCEGPNKFKCQSGECISLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCS 297
Query: 82 QMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQ 141
+C + K Y C C EG+ L D H C+ I+ S L + + ++
Sbjct: 298 HICNDLKIGYECLCPEGFQL-VDKHRCEDIDECQDPDACSQICVNLEGSYKCQCEEGFQL 356
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+ + + +AY +++ + R D + ++ N+ + LD
Sbjct: 357 EPLTKACKAIGTIAY------LFFTNRHEVRKMTLDRSEYTSLIPNLKNV-----VALDT 405
Query: 202 SPGTRWLFWTDWGE----NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+ ++W+D + + +I+R S+ TII + P+GL +D +Y+ DS
Sbjct: 406 EVASNRIYWSDLSQRKIYSTQIDR-APSFSSYDTIIGEDLQAPDGLAVDWIHSNIYWTDS 464
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
L + S+ V T+F++ G A
Sbjct: 465 ILGTV---SVADTKGVKRKTLFQE-----------------------------KGSKPRA 492
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
+ +D +G +Y WTDWG +I++ G++G + ++++ I WPNG+TLD+
Sbjct: 493 IVVDPVHGFMY-----------WTDWGTPAKIKKGGLNGVDVYSLVTEDIQWPNGITLDL 541
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ R+Y+ DSKL I + +G R+ V+
Sbjct: 542 SGGRLYWVDSKLHSISSIDVNGGNRKTVL 570
>gi|307168698|gb|EFN61730.1| Putative vitellogenin receptor [Camponotus floridanus]
Length = 1335
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 107/309 (34%), Positives = 157/309 (50%), Gaps = 33/309 (10%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+RC++L VCD K DC +G+DE C + CS+ C TP G C C PG +
Sbjct: 179 ERCISLNAVCDEKNDCGDGSDEDHRCKIP---CTLLNCSDNCKQTPDGPKCICKPGYKIQ 235
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAA------ 116
D++TC D++EC+ G C Q C NT GSY C+C GY ++ D TCKA ++AA
Sbjct: 236 -DTITCIDIDECQIYGICDQGCVNTVGSYKCTCETGYFMQDDMKTCKATTNNAAKNLSHV 294
Query: 117 --------FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS 168
++ SNR + + + + IV GLD V G+A DWI G+IY+ D
Sbjct: 295 SSIAVNGDYIYCSNRFKDFQTIVASTIIEGKQEAIVTQGLDSVSGIAVDWITGNIYFTDD 354
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I +C+ NGT +L + ++PRG++L P G +FW D G P I MDG N
Sbjct: 355 GNKHIGICNANGTYCTILISEQ-SKPRGIVLLPIKGI--MFWCDVGF-PHIGIAEMDGKN 410
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE-----------IKTNVNYST 277
S+ I+ + WP LT+D R+Y+ + K + I+ L+ I++ + +
Sbjct: 411 SSSFITDNLEWPVSLTIDYPNNRLYWLEKKKNVIESIRLDGTDRRVVLDDIIQSPYSLAV 470
Query: 278 IFRKLYWID 286
KLYW D
Sbjct: 471 FENKLYWSD 479
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 72/118 (61%), Gaps = 3/118 (2%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C++ KVCDG DC +G+DE C + C H +C + C+ TPLG +C C G L+ D
Sbjct: 1180 CLSFDKVCDGIRDCLDGSDENGLC-TSSCAHN-NVCKDICYKTPLGGVCGCQTGYRLAAD 1237
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
+ +C D+NECE CSQ+C N GS+ CSC++GYV+ D +CKAI + +++
Sbjct: 1238 TKSCDDINECEL-DVCSQICRNIVGSFQCSCHDGYVIRSDRISCKAIGPPMELITVTD 1294
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 16/130 (12%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
+Y+ D+G IG N +G+ +IL+S Q G++ L +FW
Sbjct: 349 IYFTDDGNK----HIGICNANGTYCTILISEQ-------SKPRGIVL---LPIKGIMFWC 394
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D G P I MDG N S+ I+ + WP LT+D R+Y+ + K + I+ DGT
Sbjct: 395 DVGF-PHIGIAEMDGKNSSSFITDNLEWPVSLTIDYPNNRLYWLEKKKNVIESIRLDGTD 453
Query: 402 RQQVILIDLM 411
R +V+L D++
Sbjct: 454 R-RVVLDDII 462
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I +A+++ K + + L+ L D+ +YWL+ + N IE +GT+R V
Sbjct: 401 IGIAEMDGKN----SSSFITDNLEWPVSLTIDYPNNRLYWLEKKKNVIESIRLDGTDRRV 456
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
+ D I P + + + L+W+DW EN
Sbjct: 457 VLDDIIQSPYSLAVFENK----LYWSDWHEN 483
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 87/236 (36%), Gaps = 55/236 (23%)
Query: 71 MNECEQPGYCSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII--------- 120
+N C P CSQ+C N Y C C L+ DNHTC+ + +II
Sbjct: 521 LNPC-HPNPCSQLCMLNRDKGYTCGCTIDKELKADNHTCREVKKEQHLIIIMGNTFIDYF 579
Query: 121 --------------------------------SNRHSILVADLEEKGKDHRAQDIVVSGL 148
S++H+ + + ++++
Sbjct: 580 HNFLGKPKITTSTTSRFITAATYDSLTGTIIASDKHTNYIIRYDPNSG--ITENLIPFNN 637
Query: 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
++ G+A+D+IG ++Y + IEV + V ++ +P ++L P G ++
Sbjct: 638 AILGGIAFDYIGNNLYLSNKEDQTIEVHSLTTKTKTVFYFED--RPCSIVLAPEEGIMFI 695
Query: 209 FWTD-----WGENPRIERIGMDG---SNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ + + R+E++ M+G N I Y L D A + ++ D
Sbjct: 696 VFNVKYSRLYTPSYRLEKMKMNGIGPRNSINTIRNMEYTEMLLHYDTAKKTLFVTD 751
>gi|149020469|gb|EDL78274.1| low density lipoprotein receptor, isoform CRA_a [Rattus norvegicus]
Length = 879
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 156/300 (52%), Gaps = 46/300 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++L KVC+ DC + +DE C EC G CS+ C +G C CP G L
Sbjct: 290 CISLDKVCNSARDCRDWSDEPIKECKTNECLDNNGGCSHICKDLKIGYECLCPSGFRLV- 348
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D C+D++EC++P CSQ+C N +GS+ C C G+ ++ CKA+ S FL+ +NR
Sbjct: 349 DGHQCEDIDECQEPDTCSQLCVNLEGSFKCECRAGFHMDPHTRVCKAVG-SIGFLLFTNR 407
Query: 124 HSIL------------------VADLEEKGKDHR----------------------AQDI 143
H + V L+ + ++R + D
Sbjct: 408 HEVRKMTLDRSEYTSLIPNLKNVVALDTEVANNRIYWSDLSQRKIYSAVMDQGTSLSYDA 467
Query: 144 VVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++SG L +GLA DWI G+IYW DS + V D G R L ++ ++PR +++DP
Sbjct: 468 IISGDLHAPDGLAVDWIHGNIYWTDSVPGTVSVADTKGVRRRTLFREKGSRPRAIVVDPV 527
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL I
Sbjct: 528 HG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTEDIQWPNGITLDLPSGRLYWVDSKLHSI 585
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 171/424 (40%), Gaps = 95/424 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC--KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ ++ CD + DC + +DE ++ +C +KF S C L +C
Sbjct: 249 CIHGSRQCDREHDCKDMSDELGCINVTQCDGPNKFKCHSGEC--ISLDKVC--------- 297
Query: 63 NDSVTCQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI 111
N + C+D NEC + G CS +C + K Y C C G+ L D H C+ I
Sbjct: 298 NSARDCRDWSDEPIKECKTNECLDNNGGCSHICKDLKIGYECLCPSGFRL-VDGHQCEDI 356
Query: 112 NHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN 171
+ + S L +LE K + G D
Sbjct: 357 DECQE----PDTCSQLCVNLEGSFK-----------CECRAGFHMD-------------P 388
Query: 172 RIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI-GMDGSNRS 230
VC G+ +L N + R M LD S T + P ++ + +D +
Sbjct: 389 HTRVCKAVGSIGFLLFT-NRHEVRKMTLDRSEYTSLI--------PNLKNVVALD----T 435
Query: 231 TIISTKIYWPNGLTLDIATRRVYFA------DSKLDFIDCKSLEIKTNVNYSTIFRKLYW 284
+ + +IYW D++ R++Y A D I L + I +YW
Sbjct: 436 EVANNRIYWS-----DLSQRKIYSAVMDQGTSLSYDAIISGDLHAPDGLAVDWIHGNIYW 490
Query: 285 IDEGGNGVPLKIGKANMDGSNASILV--SGQLYEALALDLENGMLYYSTLKCTRWLFWTD 342
D VP + A+ G L G A+ +D +G +Y WTD
Sbjct: 491 TD----SVPGTVSVADTKGVRRRTLFREKGSRPRAIVVDPVHGFMY-----------WTD 535
Query: 343 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
WG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL I + +G GR
Sbjct: 536 WGTPAKIKKGGLNGVDIYSLVTEDIQWPNGITLDLPSGRLYWVDSKLHSISSIDVNGGGR 595
Query: 403 QQVI 406
+ ++
Sbjct: 596 KTIL 599
>gi|426246014|ref|XP_004016793.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 4 [Ovis aries]
Length = 1904
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 184/426 (43%), Gaps = 103/426 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C G
Sbjct: 316 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGGENCNVNNGGCPRQWQMVGGGGEWGPHH 375
Query: 58 GEILSNDSV------TCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI 111
G+ L + D+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 376 GDRLEDGRTKICPCSVVTDVNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKAL 435
Query: 112 NHSAAFLIISNR------------HSILVADLEEKGK---DHR----------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 436 G-PEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRA 494
Query: 140 ------AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +
Sbjct: 495 NLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEK 554
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
PR + L P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y
Sbjct: 555 PRAIALHPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMY 612
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+ D+K I+ +AN+DGS+ ++S
Sbjct: 613 WVDAKHHVIE----------------------------------RANLDGSHRKAVISQG 638
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
L A+ + LY WTDW G N+ II K+++P
Sbjct: 639 LPHPFAITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP--- 683
Query: 374 TLDIAT 379
+DI T
Sbjct: 684 -MDIHT 688
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 156/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1311 KCGPRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPAPETYLLFSSRGSIRRISLDT 1370
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1371 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1420
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1421 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1480
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1481 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1536
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A++ G +LVS + AL
Sbjct: 1537 --------------------------------RIESADLSGKLRQVLVS-HVSHPFALTQ 1563
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1564 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1594
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 134/307 (43%), Gaps = 91/307 (29%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----------- 126
G C+ +C + +Y C+C G+ + +H C FL+ + R I
Sbjct: 706 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTEDLS 762
Query: 127 ----------------------------LVADLEEKGK-DHRAQDIVV-SGLDLVEGLAY 156
+ D + K D Q++VV + L+ GLA
Sbjct: 763 DDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAI 822
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR ++++P G +++WTDWG +
Sbjct: 823 DWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGG--YMYWTDWGAS 880
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD S R IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 881 PKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF------- 928
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
A +DGS +L+ QL L L +Y
Sbjct: 929 ----------------------AGLDGSKRKVLIGSQLPHPFGLTLYGERIY-------- 958
Query: 337 WLFWTDW 343
WTDW
Sbjct: 959 ---WTDW 962
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 121/233 (51%), Gaps = 24/233 (10%)
Query: 46 PTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-GSYICSCNEGY---VL 101
P P G CTCP G + D TC PG S + + + S + Y V+
Sbjct: 1020 PNPSGFSCTCPTGINVMPDGKTCS-------PGMNSFLIFARRIDIRMVSLDIPYFADVV 1072
Query: 102 EYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGL 154
N T K + S H I A L+ G H +D++ +GL +GL
Sbjct: 1073 VPINMTMKNTIAVGVDPQEGKVYWSDSTLHKISCARLD--GSQH--EDLITTGLQTTDGL 1128
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L G +++WTDWG
Sbjct: 1129 AVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVLYHEMG--FMYWTDWG 1186
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
E+ ++ER GMDGS+R+ +I++ + WPNGLT+D A+ ++ +AD+ + I+ L
Sbjct: 1187 EHAKLERSGMDGSDRTVLINSNLGWPNGLTVDKASSQLLWADAHTERIEAADL 1239
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 106/226 (46%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DP+P T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1344 GKTCDPAPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1399
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1400 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1455
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1456 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1506
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + G RQ ++
Sbjct: 1507 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLSGKLRQVLV 1552
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 96/178 (53%), Gaps = 26/178 (14%)
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLE-------IKTNVNYS------TIFRKLYWIDEG 288
+ +D +VY++DS L I C L+ I T + + I RK+YW D G
Sbjct: 1084 AVGVDPQEGKVYWSDSTLHKISCARLDGSQHEDLITTGLQTTDGLAVDAIGRKVYWTDTG 1143
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
N +I N+DGS +LV L A+ L + M + ++WTDWGE+ +
Sbjct: 1144 TN----RIEVGNLDGSMRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGEHAK 1190
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ER GMDGS+R+ +I++ + WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1191 LERSGMDGSDRTVLINSNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1248
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 116/298 (38%), Gaps = 41/298 (13%)
Query: 129 ADLEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
A LE G D + +++ S L GL D + W D+ RIE D NG NR L
Sbjct: 1189 AKLERSGMDGSDRTVLINSNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1248
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P G+ L + +++WTDW + I R D S +I + P + +
Sbjct: 1249 SP-VQHPYGLTLLDA----YIYWTDW-QTRSIHR--ADKGTGSNVILVRSNLPGLMDIQA 1300
Query: 248 ATRRVYFADSKLDFID--CKSLEIKTNVNYSTIFRKLYWIDEGGN--------------- 290
R +K + C L + +S + G
Sbjct: 1301 VDRSQPLGVNKCGPRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPAPETYLLFSSR 1360
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENPR 348
G +I D ++ + V +L ++LD + +G +YY+ +
Sbjct: 1361 GSIRRISLDTSDHTDVHVPVP-ELNNVISLDYDSVDGKVYYTDVFLD------------V 1407
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
I R ++GSN T+I + +GL +D R +Y+ D+ + I+ DG+ R+ +I
Sbjct: 1408 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLI 1465
>gi|3201962|gb|AAC39254.1| low density lipoprotein receptor, partial [Sus scrofa]
Length = 801
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 168/339 (49%), Gaps = 60/339 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 259 ECISLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKIGYECLCPEGFQLV 318
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC+ P CSQ+C N +GSY C C EG+ LE CKAI + A+L +N
Sbjct: 319 -DKHRCEDIDECQDPDACSQICVNLEGSYKCQCEEGFQLEPLTKACKAIG-TIAYLFFTN 376
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L+ ++ +
Sbjct: 377 RHEVRKMTLDRSEYTSLIPNLKNVVALDTEVASNRIYWSDLSQRKIYSTQIDRAPSFSSY 436
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D ++ L +GLA DWI +IYW DS L + V D G R L ++ ++PR +++D
Sbjct: 437 DTIIGEDLQAPDGLAVDWIHSNIYWTDSILGTVSVADTKGVKRKTLFQEKGSKPRAIVVD 496
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD++ R+Y+ DSKL
Sbjct: 497 PVHG--FMYWTDWGTPAKIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLH 554
Query: 261 FIDC---------KSLEIKTNVNYS---TIFR-KLYWID 286
I LE KT + + IF K++W D
Sbjct: 555 SISSIDVNGGNRKTVLEDKTKLAHPFSLAIFEDKVFWTD 593
>gi|4235639|gb|AAD13300.1| low density lipoprotein receptor [Sus scrofa]
Length = 782
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 113/339 (33%), Positives = 170/339 (50%), Gaps = 60/339 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 240 ECISLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKIGYECLCPEGFQLV 299
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC+ P CSQ+C N +GSY C C EG+ LE CKAI + A+L +N
Sbjct: 300 -DKHRCEDIDECQDPDACSQICVNLEGSYKCQCEEGFQLEPLTKACKAIG-TIAYLFFTN 357
Query: 123 RHSI-------------------LVA-------------DLEEKG----KDHRAQD---- 142
RH + +VA DL ++ + +RA
Sbjct: 358 RHEVRKMTLDRSEYTSLIPNLKNVVALDTEVASNRIYWSDLSQRKIYSTQINRAPSFSSY 417
Query: 143 --IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
I+ L +GLA DWI +IYW DS L + V D G R L ++ ++PR +++D
Sbjct: 418 DTIIGEDLQAPDGLAVDWIHSNIYWTDSILGTVSVADTKGVKRKTLFQEKGSKPRAIVVD 477
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD++ R+Y+ DSKL
Sbjct: 478 PVHG--FMYWTDWGTPAKIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLH 535
Query: 261 FIDC---------KSLEIKTNVNYS---TIFR-KLYWID 286
I LE KT + + IF K++W D
Sbjct: 536 SISSIDVNGGNRKTVLEDKTKLAHPFSLAIFEDKVFWTD 574
>gi|1730113|sp|P98166.1|VLDLR_RAT RecName: Full=Very low-density lipoprotein receptor; Short=VLDL
receptor; Short=VLDL-R; Flags: Precursor
gi|532226|gb|AAA42341.1| very low density lipoprotein receptor [Rattus norvegicus]
Length = 873
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 170/362 (46%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C+++TKVCD + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDITKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEKG-------------------------KDHRAQDIVVSGLDLVEG--- 153
NR I LE K D + I + +D G
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHF 506
Query: 154 -----------LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 32/204 (15%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
I +IG++ ++ ++ L DIA +++++AD I S++ K ++ I
Sbjct: 451 IRKIGLERKEYIQLVE-QLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHFKMI 509
Query: 279 --------------FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDL 322
++ +YW D + + A +DG+ L + L E ++A+D
Sbjct: 510 DNVYNPAAIAVDWVYKTIYWTDAASKTISV----ATLDGTKRKFLFNSDLREPASIAVDP 565
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+G +Y W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+
Sbjct: 566 LSGFVY-----------WSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRL 614
Query: 383 YFADSKLDFIDFCNYDGTGRQQVI 406
Y+ DSKL + + +G R+ V+
Sbjct: 615 YWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|293597511|ref|NP_037287.2| very low-density lipoprotein receptor precursor [Rattus norvegicus]
Length = 873
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 170/362 (46%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C+++TKVCD + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDITKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEKG-------------------------KDHRAQDIVVSGLDLVEG--- 153
NR I LE K D + I + +D G
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHF 506
Query: 154 -----------LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 32/204 (15%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
I +IG++ ++ ++ L DIA +++++AD I S++ K ++ I
Sbjct: 451 IRKIGLERKEYIQLVE-QLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHFKMI 509
Query: 279 --------------FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDL 322
++ +YW D + + A +DG+ L + L E ++A+D
Sbjct: 510 DNVYNPAAIAVDWVYKTIYWTDAASKTISV----ATLDGTKRKFLFNSDLREPASIAVDP 565
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+G +Y W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+
Sbjct: 566 LSGFVY-----------WSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRL 614
Query: 383 YFADSKLDFIDFCNYDGTGRQQVI 406
Y+ DSKL + + +G R+ V+
Sbjct: 615 YWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|149020470|gb|EDL78275.1| low density lipoprotein receptor, isoform CRA_b [Rattus norvegicus]
Length = 803
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 156/301 (51%), Gaps = 46/301 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L KVC+ DC + +DE C EC G CS+ C +G C CP G L
Sbjct: 289 ECISLDKVCNSARDCRDWSDEPIKECKTNECLDNNGGCSHICKDLKIGYECLCPSGFRLV 348
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC++P CSQ+C N +GS+ C C G+ ++ CKA+ S FL+ +N
Sbjct: 349 -DGHQCEDIDECQEPDTCSQLCVNLEGSFKCECRAGFHMDPHTRVCKAVG-SIGFLLFTN 406
Query: 123 RHSIL------------------VADLEEKGKDHR----------------------AQD 142
RH + V L+ + ++R + D
Sbjct: 407 RHEVRKMTLDRSEYTSLIPNLKNVVALDTEVANNRIYWSDLSQRKIYSAVMDQGTSLSYD 466
Query: 143 IVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++SG L +GLA DWI G+IYW DS + V D G R L ++ ++PR +++DP
Sbjct: 467 AIISGDLHAPDGLAVDWIHGNIYWTDSVPGTVSVADTKGVRRRTLFREKGSRPRAIVVDP 526
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL
Sbjct: 527 VHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTEDIQWPNGITLDLPSGRLYWVDSKLHS 584
Query: 262 I 262
I
Sbjct: 585 I 585
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 171/415 (41%), Gaps = 77/415 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC--KHKFGLCSNTCHPTPLGALC-TCPPGEIL 61
C++ ++ CD + DC + +DE ++ +C +KF S C L +C +
Sbjct: 249 CIHGSRQCDREHDCKDMSDELGCINVTQCDGPNKFKCHSGEC--ISLDKVCNSARDCRDW 306
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
S++ + NEC + G CS +C + K Y C C G+ L D H C+ I+
Sbjct: 307 SDEPIKECKTNECLDNNGGCSHICKDLKIGYECLCPSGFRL-VDGHQCEDIDECQE---- 361
Query: 121 SNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG 180
+ S L +LE K + G D VC G
Sbjct: 362 PDTCSQLCVNLEGSFK-----------CECRAGFHMD-------------PHTRVCKAVG 397
Query: 181 TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYW 239
+ +L N + R M LD S T + P ++ + +D + + + +IYW
Sbjct: 398 SIGFLLFT-NRHEVRKMTLDRSEYTSLI--------PNLKNVVALD----TEVANNRIYW 444
Query: 240 PNGLTLDIATRRVYFA------DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
D++ R++Y A D I L + I +YW D VP
Sbjct: 445 S-----DLSQRKIYSAVMDQGTSLSYDAIISGDLHAPDGLAVDWIHGNIYWTD----SVP 495
Query: 294 LKIGKANMDGSNASILV--SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
+ A+ G L G A+ +D +G +Y WTDWG +I++
Sbjct: 496 GTVSVADTKGVRRRTLFREKGSRPRAIVVDPVHGFMY-----------WTDWGTPAKIKK 544
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL I + +G GR+ ++
Sbjct: 545 GGLNGVDIYSLVTEDIQWPNGITLDLPSGRLYWVDSKLHSISSIDVNGGGRKTIL 599
>gi|114675453|ref|XP_001167024.1| PREDICTED: low-density lipoprotein receptor isoform 1 [Pan
troglodytes]
Length = 739
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 153/302 (50%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 167 ECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLV 226
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
C+D++EC+ P CSQ+C N +G Y C C EG+ L+ CKA+ S A+L +N
Sbjct: 227 AQR-RCEDIDECQHPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG-SIAYLFFTN 284
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L ++ +
Sbjct: 285 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY 344
Query: 142 DIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D V+S + +GLA DWI +IYW DS L + V D G R L ++N ++PR +++D
Sbjct: 345 DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVD 404
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL
Sbjct: 405 PVHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 462
Query: 261 FI 262
I
Sbjct: 463 SI 464
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLD 200
+V + G+ D + G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 434 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTVLEDEKRLAHPFSLAVF 493
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 494 EDK----VFWTD 501
>gi|344240337|gb|EGV96440.1| Low-density lipoprotein receptor-related protein 4 [Cricetulus
griseus]
Length = 766
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 193/415 (46%), Gaps = 95/415 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C++ + VCDG+ DC +G+DEG C + C G C ++C+ +P G +C C PG L +
Sbjct: 213 CLSFSMVCDGREDCADGSDEGGECSSSVCSP--GRCYHSCYLSPAGPVCACGPGFQLESS 270
Query: 65 SVTCQDMNECEQPG--YCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII-- 120
CQD+NEC+QP CSQ C NT+GSYIC+C+ GY+L D HTCKA L+
Sbjct: 271 GQICQDVNECQQPAGRPCSQTCINTEGSYICACHPGYLLGPDGHTCKATGAEPILLVAID 330
Query: 121 ---------SNRHSILVA------------DLEEKG---KDHRAQDI------------V 144
S + IL DL ++ D A+ I V
Sbjct: 331 FNLFLSGLRSLKEDILATTDKNLAIYSVDYDLVDQKVFWADPNAESIRWISMATKKDGMV 390
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD----ENGTNRIVLAKDNITQPRGMMLD 200
V G+ + + DWIG ++YW D +I E G + + D++ QP + LD
Sbjct: 391 VRGIK-PDCIVVDWIGRNLYWTDRGAGQILAIQLTAVERGKSEFTVVLDDVIQPHSLALD 449
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G ++W++ GE P+IE+ GMDGS+R +++ + P + LD + +++++D+K
Sbjct: 450 PLNGL--MYWSEIGEEPQIEQAGMDGSSRKMLVNEGLGQPTSIALDQLSWKIFWSDAKFH 507
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
IG AN+DGS S++ Q+ ++
Sbjct: 508 C----------------------------------IGSANLDGSGISMMQLTQIKSPFSV 533
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
+ L++S LK TR + R+E+I G +R+ +I + P GL +
Sbjct: 534 AVFEDELFWSDLK-TRTI--------QRVEKI--TGKDRAVLIK-RSGQPFGLKI 576
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 91/190 (47%), Gaps = 24/190 (12%)
Query: 246 DIATRRVYFADSKLDFIDCKSLEIKTN-----------VNYSTIFRKLYWIDEG-GNGVP 293
D+ ++V++AD + I S+ K + + I R LYW D G G +
Sbjct: 361 DLVDQKVFWADPNAESIRWISMATKKDGMVVRGIKPDCIVVDWIGRNLYWTDRGAGQILA 420
Query: 294 LKIGKANMDGSNASILVSGQLY-EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+++ S ++++ + +LALD NG++Y W++ GE P+IE+
Sbjct: 421 IQLTAVERGKSEFTVVLDDVIQPHSLALDPLNGLMY-----------WSEIGEEPQIEQA 469
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
GMDGS+R +++ + P + LD + +++++D+K I N DG+G + L +
Sbjct: 470 GMDGSSRKMLVNEGLGQPTSIALDQLSWKIFWSDAKFHCIGSANLDGSGISMMQLTQIKS 529
Query: 413 EFTNDLMGDN 422
F+ + D
Sbjct: 530 PFSVAVFEDE 539
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 54/123 (43%), Gaps = 5/123 (4%)
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
++SG V A DW+ G+IYW+DS I V G IVL +N+ P ++L P
Sbjct: 642 IISGKGTVVDFALDWLSGNIYWIDSENPHINVASSKGQYPIVLLSENLYHPTSIVLHPPM 701
Query: 204 GTRWLF----WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
L D IE MDGS R + K P GL + RVY+AD+
Sbjct: 702 AVMCLADLGSQDDGRHGSSIECASMDGSRRRALW-LKSQVPVGLAFSDSGTRVYWADTGK 760
Query: 260 DFI 262
I
Sbjct: 761 QLI 763
>gi|296232913|ref|XP_002761791.1| PREDICTED: low-density lipoprotein receptor isoform 1 [Callithrix
jacchus]
Length = 860
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 155/302 (51%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 288 ECIALNKVCNSARDCRDWSDEPLKECGTNECLDNNGGCSHICNDLKIGHECLCPDGFQLV 347
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
C+D++EC+ P CSQ+C N +GSY C C EG+ L+ CKA+ S A+LI +N
Sbjct: 348 AQR-RCEDIDECQDPDTCSQLCVNLEGSYKCQCEEGFQLDPHTKACKAVG-SIAYLIFTN 405
Query: 123 RHSIL------------------VADLEEKGKDHR------AQDIVVS------------ 146
RH + V L+ + +R +Q ++ S
Sbjct: 406 RHEVRKMTLDRSEYTSLIPNLRNVVALDMEVASNRIYWSDLSQRVIYSTQLDGAHGFSSY 465
Query: 147 ------GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
L +GLA DWI +IYW DS L + V D G R L ++ ++PR +++D
Sbjct: 466 NTVISKDLQAPDGLAVDWIHSNIYWTDSVLGTVSVADTRGVKRKTLFRETGSKPRAIVVD 525
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG + +I++ G++G + ++++ I WPNG+TLD+ R+Y+ADSKL
Sbjct: 526 PVHG--FMYWTDWGISAKIKKGGLNGVDVYSLVTDNIQWPNGITLDLPRGRLYWADSKLH 583
Query: 261 FI 262
I
Sbjct: 584 SI 585
>gi|391335881|ref|XP_003742315.1| PREDICTED: low-density lipoprotein receptor-related protein 4-like
[Metaseiulus occidentalis]
Length = 1807
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 151/312 (48%), Gaps = 50/312 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC---DLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
C++ VCDG+ CP+ +DE C+ + C + C T G C C G L
Sbjct: 235 CISEKSVCDGEPHCPDRSDESANTTCRSTKPCREENVPCQHQCIATATGHRCACREGYQL 294
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL--- 118
+ D +C D++EC G CS CTNT Y C+C+ GY L D+ CKA A L
Sbjct: 295 AGDLRSCLDIDECRILGMCSHNCTNTVPGYQCTCSRGYKLRDDHRHCKAQGPEAFILFAH 354
Query: 119 ------IISNR--HSILVADLE---------------------------------EKGKD 137
+ S+R +SI+++ + +
Sbjct: 355 CTDIRRLKSDRTGYSIVLSKFQNVVALDFIYHLNLLIWSDIGQKTIQSYVLNQTLSANVE 414
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDE-NGTNRIVLAKDNITQPRG 196
R ++ + GLA DW+ IYW DS+ +RIE G +R +L +I +PRG
Sbjct: 415 PRITTLISRAIPNAGGLAADWLSNRIYWTDSKTSRIESASALTGLDRKLLVHSDIQKPRG 474
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ L P +FWTDWG+ PRIERI MDGS R T+ ++ ++WPNG+T+D T +Y++D
Sbjct: 475 IALHPHFSM--VFWTDWGDQPRIERIFMDGSERRTLFNSSLFWPNGITVDYPTNSIYWSD 532
Query: 257 SKLDFIDCKSLE 268
KL+ ++C +++
Sbjct: 533 GKLNTLECATID 544
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 154/347 (44%), Gaps = 93/347 (26%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR---HSI-------- 126
G CS +C ++ C C G ++ D TC A+ +A L+ +NR HSI
Sbjct: 1240 GGCSHLCLSSPRGISCQCPTGIEIQEDGKTCDAL--PSALLVFANRDYLHSISMDTPDRT 1297
Query: 127 ------------LVADLEEKGKD-------------------HRAQDIVVSGLDLVEGLA 155
+ D + + K R + ++ + L +GLA
Sbjct: 1298 DVLLPITDIKDAVALDFDYENKKLYFTDVKLDVIRSVDVLNGSRLETVIDADLASADGLA 1357
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
+DWI +IYW DS IEVC +G++R +L ++ +PR + L P G ++FW+DWG
Sbjct: 1358 FDWIAKNIYWSDSGRETIEVCRYDGSSRKLLTNLDLDEPRALALFPDRG--YVFWSDWGR 1415
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNY 275
P+IER +DGS+R I++T + WPNGLT+D +R+Y+ D+++D I+
Sbjct: 1416 LPKIERAYLDGSSRRVIVATDLGWPNGLTVDYEAKRIYWVDAQMDCIE------------ 1463
Query: 276 STIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCT 335
++++G + + LV ++ G + TL
Sbjct: 1464 ----------------------MSDLNGKHRTKLV-----------IDVGHPFGLTLH-G 1489
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+++WTDW + +ER + II +I P + + ATR+
Sbjct: 1490 NYIYWTDW-QTKSVERAEKLSGKKRQIIRDEIENPMDIKMVAATRQT 1535
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 118/241 (48%), Gaps = 16/241 (6%)
Query: 40 CSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE----CEQPGYCSQMCTNTKGSY---- 91
CS+ C C CP G L D+ TC E G +MC + S
Sbjct: 626 CSHMCFSNLKAFTCACPDGLTLLADNKTCSQWPEDAIIFSIRGDIRRMCIHCSNSIDVPV 685
Query: 92 -ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDL 150
I EG++ + +H + + ++R + + G + + +V+ +
Sbjct: 686 PIDYRMEGFMKNASSAMALEFDHESGSIFWTDRTNQAIWTSSWDGTNQK----MVAQANA 741
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
+ LA+DWI +YW D+ RIEVC +G+ R +L +++ +PRG+++DP G +L+W
Sbjct: 742 AD-LAFDWINRKLYWTDAMNARIEVCHIDGSLRSLLHWNSLYKPRGIVVDPLRG--FLYW 798
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
TDWG+ P+IER M GS R+ ++ + WPN L +D + +Y+ D+ + I+ LE
Sbjct: 799 TDWGDVPKIERSTMAGSARTVLVPNGLKWPNALAIDHGSETLYWTDANMKLIEMLHLESM 858
Query: 271 T 271
T
Sbjct: 859 T 859
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 116/482 (24%), Positives = 183/482 (37%), Gaps = 94/482 (19%)
Query: 28 CDLAECKHKFGLCSNTC---HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMC 84
C L EC CS+ C P G C CP G L ND+ TC D + +
Sbjct: 929 CALNECG-----CSHLCLLSAGKPDGCECACPTGSTLLNDTKTCSD-------AFRKMLV 976
Query: 85 TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQ--- 141
+ + E + Y I H +I + ++ G R Q
Sbjct: 977 FSQRTEMRLMSVE---MPYWADVVVPIPHRLENIIALHMDTVSERIFFSDGNLRRIQSCA 1033
Query: 142 -------DIVVSGLDLVEGLAYDWIGGHIYWLDS--RLNRIEVCDENGTNR-IVLAKDNI 191
D+V G++ + GL D IYW D+ RIEV + +G +R ++L + +
Sbjct: 1034 LDGGDVKDVVTIGIETLGGLVVDSRARKIYWTDAGPHQPRIEVAELDGAHRRVILWQQEM 1093
Query: 192 TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
PR + + P G W+FWTDWG PR++R DG NR T+I K+ WP+ L +D+ R
Sbjct: 1094 DSPRSITIYPEKG--WIFWTDWGNQPRVDRADADGRNRKTLIIGKLGWPHCLAVDLQAGR 1151
Query: 252 VYFADSKLDFIDCKSL----------EIKTNVNYSTIFRKLYWIDEGGNGV-PLKIGKAN 300
+ +AD+K I+ L E+ + + +L+W D +
Sbjct: 1152 LVWADAKSHTIESVDLDGRDRRVLLKELPSPYGVTVWNARLFWTDWQTRAIHEASKPTEK 1211
Query: 301 MDGSNASILVSGQLYEALALDLE----------NGMLYYSTLKCTRWL------------ 338
+ G+ ASI+ + DLE NG + L R +
Sbjct: 1212 LKGNLASIM------DIHYFDLEDKGTNLCSKNNGGCSHLCLSSPRGISCQCPTGIEIQE 1265
Query: 339 ----------FWTDWGENPRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFAD 386
+ + I MD +R+ ++ T I L D +++YF D
Sbjct: 1266 DGKTCDALPSALLVFANRDYLHSISMDTPDRTDVLLPITDIKDAVALDFDYENKKLYFTD 1325
Query: 387 SKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFL 446
KLD I + R + ++ DL +G LA D +Y+S G E +
Sbjct: 1326 VKLDVIRSVDVLNGSRLETVI-------DADLASADG---LAFDWIAKNIYWSDSGRETI 1375
Query: 447 KT 448
+
Sbjct: 1376 EV 1377
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 108/221 (48%), Gaps = 34/221 (15%)
Query: 219 IERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
+ I MD +R+ ++ T I L D +++YF D KLD I +S+++
Sbjct: 1286 LHSISMDTPDRTDVLLPITDIKDAVALDFDYENKKLYFTDVKLDVI--RSVDVLNGSRLE 1343
Query: 277 TIF----------------RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
T+ + +YW D G + + DGS+ +L + L E AL
Sbjct: 1344 TVIDADLASADGLAFDWIAKNIYWSDSGRETIEV----CRYDGSSRKLLTNLDLDEPRAL 1399
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L Y +FW+DWG P+IER +DGS+R I++T + WPNGLT+D +
Sbjct: 1400 ALFPDRGY---------VFWSDWGRLPKIERAYLDGSSRRVIVATDLGWPNGLTVDYEAK 1450
Query: 381 RVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
R+Y+ D+++D I+ + +G R +++ ID+ F L G+
Sbjct: 1451 RIYWVDAQMDCIEMSDLNGKHRTKLV-IDVGHPFGLTLHGN 1490
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 134/361 (37%), Gaps = 105/361 (29%)
Query: 56 PPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA 115
PPGE N C CS MC + ++ C+C +G L DN TC A
Sbjct: 615 PPGE------------NPCTNSS-CSHMCFSNLKAFTCACPDGLTLLADNKTCSQWPEDA 661
Query: 116 AFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEV 175
I +G R + +D+ + Y R+E
Sbjct: 662 IIFSI-------------RGDIRRMCIHCSNSIDVPVPIDY---------------RMEG 693
Query: 176 CDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST 235
+N ++ + L D G+ +FWTD N I DG+N+ +
Sbjct: 694 FMKNASSAMALE-----------FDHESGS--IFWTD-RTNQAIWTSSWDGTNQKMVAQA 739
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
AD D+I+ RKLYW D + +
Sbjct: 740 NA-----------------ADLAFDWIN----------------RKLYWTD----AMNAR 762
Query: 296 IGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
I ++DGS S+L LY+ + +D G LY WTDWG+ P+IER
Sbjct: 763 IEVCHIDGSLRSLLHWNSLYKPRGIVVDPLRGFLY-----------WTDWGDVPKIERST 811
Query: 354 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
M GS R+ ++ + WPN L +D + +Y+ D+ + I+ + + R+ ++ ++
Sbjct: 812 MAGSARTVLVPNGLKWPNALAIDHGSETLYWTDANMKLIEMLHLESMTRRVLLQKEMPNP 871
Query: 414 F 414
F
Sbjct: 872 F 872
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 133/338 (39%), Gaps = 85/338 (25%)
Query: 161 GHIYWLD-SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRI 219
G I+W D R++ D +G NR L + P + +D G L W D ++ I
Sbjct: 1106 GWIFWTDWGNQPRVDRADADGRNRKTLIIGKLGWPHCLAVDLQAGR--LVWAD-AKSHTI 1162
Query: 220 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEI-KTNVNYSTI 278
E + +DG +R ++ ++ P G+T + R+++ D + I S K N ++I
Sbjct: 1163 ESVDLDGRDRRVLLK-ELPSPYGVT--VWNARLFWTDWQTRAIHEASKPTEKLKGNLASI 1219
Query: 279 FRKLYW--IDEGGN--------------------------GVPLKIGKANMDGSNASILV 310
Y+ D+G N G+ ++ D +++LV
Sbjct: 1220 MDIHYFDLEDKGTNLCSKNNGGCSHLCLSSPRGISCQCPTGIEIQEDGKTCDALPSALLV 1279
Query: 311 SGQ-----------------------LYEALALDL--ENGMLYYSTLKCTRWLFWTDWGE 345
+ +A+ALD EN LY++ +K
Sbjct: 1280 FANRDYLHSISMDTPDRTDVLLPITDIKDAVALDFDYENKKLYFTDVKLDV--------- 1330
Query: 346 NPRIERIG-MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
I + ++GS T+I + +GL D + +Y++DS + I+ C YDG+ R+
Sbjct: 1331 ---IRSVDVLNGSRLETVIDADLASADGLAFDWIAKNIYWSDSGRETIEVCRYDGSSRKL 1387
Query: 405 VILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ +DL + ALAL + G +++S G
Sbjct: 1388 LTNLDL-----------DEPRALALFPDRGYVFWSDWG 1414
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 98/478 (20%), Positives = 169/478 (35%), Gaps = 111/478 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSN--------------TCHPTPLG 50
C+NL CDG +DC + +DE C+ EC C+N C
Sbjct: 157 CINLDWRCDGDSDCSDESDER-QCERPECSMNQFQCNNGRCIQKEWKCDGDFDCQDMSDE 215
Query: 51 ALC----------TCPPGEILSNDSV-----------------TCQDMNECEQPGY-CSQ 82
C C G +S SV TC+ C + C
Sbjct: 216 QDCGYIGCTAGQFRCLDGTCISEKSVCDGEPHCPDRSDESANTTCRSTKPCREENVPCQH 275
Query: 83 MCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE---EKG---- 135
C T + C+C EGY L D +C I+ + S+ + V + +G
Sbjct: 276 QCIATATGHRCACREGYQLAGDLRSCLDIDECRILGMCSHNCTNTVPGYQCTCSRGYKLR 335
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
DHR +G + H + + R++ D G + ++ N+
Sbjct: 336 DDHRHCK--------AQGPEAFILFAHC----TDIRRLKS-DRTGYSIVLSKFQNV---- 378
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGS-------NRSTIISTKIYWPNGLTLDIA 248
+ LD L W+D G+ I+ ++ + +T+IS I GL D
Sbjct: 379 -VALDFIYHLNLLIWSDIGQK-TIQSYVLNQTLSANVEPRITTLISRAIPNAGGLAADWL 436
Query: 249 TRRVYFADSKLDFIDCKS--------------LEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
+ R+Y+ DSK I+ S ++ + F ++W D G
Sbjct: 437 SNRIYWTDSKTSRIESASALTGLDRKLLVHSDIQKPRGIALHPHFSMVFWTDWGDQP--- 493
Query: 295 KIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+I + MDGS L + L+ + +D +Y W+D G+ +E
Sbjct: 494 RIERIFMDGSERRTLFNSSLFWPNGITVDYPTNSIY-----------WSD-GKLNTLECA 541
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG--TGRQQVILI 408
+DG R ++ + P+ ++ + + + D + CN G +G+Q +L+
Sbjct: 542 TIDGLERRKVVEKGL--PHPFSITVFEDNLLWTDWMSKSVHRCNKFGQESGKQTEVLV 597
>gi|334333079|ref|XP_001374466.2| PREDICTED: very low-density lipoprotein receptor-like [Monodelphis
domestica]
Length = 1189
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 174/363 (47%), Gaps = 64/363 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ + DC + +DE C++ EC G CS+ C +G C C G E++
Sbjct: 672 ECIDISKVCNQQQDCKDWSDEPLKDCNVNECLVNNGGCSHICKDLIIGYECDCAAGFELI 731
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 732 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 788
Query: 122 NRHSI--------------------------------LVADLEEKG---KDHRAQDIVVS 146
NR I ADL +K A+D V
Sbjct: 789 NRRDIRKIGLERKEYIQLVEQLRNTIALDADIAAQKLFWADLSQKAIFSAPIDARDKVGR 848
Query: 147 GLDLVE------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ +++ +A DW+ +IYW D I V +GT R +L ++ +P + +D
Sbjct: 849 HVKMIDNVYNPAAIAVDWVYKNIYWTDVASKTISVATLDGTKRKILFNSDLREPASIAVD 908
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL
Sbjct: 909 PLSG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTIDIQWPNGITLDLVKSRLYWLDSKLH 966
Query: 261 FIDC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNAS 307
+ KSLE + TIF ++YWID V G GS +
Sbjct: 967 MLSSVDLNGQDRRIVLKSLEFLAHPLAVTIFEDRVYWIDGENEAV---YGANKFTGSELA 1023
Query: 308 ILV 310
LV
Sbjct: 1024 TLV 1026
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 33/183 (18%)
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST----------------IFRKLYWI 285
L DIA +++++AD I ++ + V +++ +YW
Sbjct: 815 ALDADIAAQKLFWADLSQKAIFSAPIDARDKVGRHVKMIDNVYNPAAIAVDWVYKNIYWT 874
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDW 343
D + + A +DG+ IL + L E ++A+D +G +Y W+DW
Sbjct: 875 DVASKTISV----ATLDGTKRKILFNSDLREPASIAVDPLSGFVY-----------WSDW 919
Query: 344 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403
GE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+
Sbjct: 920 GEPAKIEKAGMNGFDRRPLVTIDIQWPNGITLDLVKSRLYWLDSKLHMLSSVDLNGQDRR 979
Query: 404 QVI 406
V+
Sbjct: 980 IVL 982
>gi|307775420|ref|NP_001182731.1| low-density lipoprotein receptor isoform 5 precursor [Homo sapiens]
Length = 739
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 153/302 (50%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 167 ECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLV 226
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
C+D++EC+ P CSQ+C N +G Y C C EG+ L+ CKA+ S A+L +N
Sbjct: 227 AQR-RCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG-SIAYLFFTN 284
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L ++ +
Sbjct: 285 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY 344
Query: 142 DIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D V+S + +GLA DWI +IYW DS L + V D G R L ++N ++PR +++D
Sbjct: 345 DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVD 404
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL
Sbjct: 405 PVHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 462
Query: 261 FI 262
I
Sbjct: 463 SI 464
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLD 200
+V + G+ D + G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 434 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF 493
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 494 EDK----VFWTD 501
>gi|194380684|dbj|BAG58495.1| unnamed protein product [Homo sapiens]
Length = 739
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 153/302 (50%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 167 ECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLV 226
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
C+D++EC+ P CSQ+C N +G Y C C EG+ L+ CKA+ S A+L +N
Sbjct: 227 AQR-RCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG-SIAYLFFTN 284
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L ++ +
Sbjct: 285 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY 344
Query: 142 DIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D V+S + +GLA DWI +IYW DS L + V D G R L ++N ++PR +++D
Sbjct: 345 DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVD 404
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL
Sbjct: 405 PVHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 462
Query: 261 FI 262
I
Sbjct: 463 SI 464
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLD 200
+V + G+ D + G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 434 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF 493
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 494 EDK----VFWTD 501
>gi|395515031|ref|XP_003761711.1| PREDICTED: very low-density lipoprotein receptor [Sarcophilus
harrisii]
Length = 983
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 175/364 (48%), Gaps = 64/364 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ + DC + +DE C++ EC G CS+ C +G C C G E++
Sbjct: 466 ECIDISKVCNQQQDCKDWSDEPLKECNINECLINNGGCSHICKDLIIGYECDCAAGFELI 525
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 526 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 582
Query: 122 NRHSI--------------------------------LVADLEEKG---KDHRAQDIVVS 146
NR I ADL +K A+D V
Sbjct: 583 NRRDIRKIGLERKEYIQLVEQLRNTIALDADIAAQKLFWADLSQKAIFSATIDARDKVGR 642
Query: 147 GLDLVE------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ +++ +A DW+ +IYW D I V +GT R +L ++ +P + +D
Sbjct: 643 HVKMIDNVYNPAAIAVDWVYKNIYWTDVASKTISVATLDGTKRKILFNSDLREPASIAVD 702
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL
Sbjct: 703 PLSG--FVYWSDWGEPAKIEKAGMNGLDRRPLVTVDIQWPNGITLDLVKSRLYWLDSKLH 760
Query: 261 FIDC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNAS 307
+ KSLE + TIF ++YWID V G GS +
Sbjct: 761 MLSSVDLNGQDRRIVLKSLEFLAHPLAVTIFEDRVYWIDGENEAV---YGANKFTGSELA 817
Query: 308 ILVS 311
LV+
Sbjct: 818 TLVN 821
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 90/183 (49%), Gaps = 33/183 (18%)
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST----------------IFRKLYWI 285
L DIA +++++AD I +++ + V +++ +YW
Sbjct: 609 ALDADIAAQKLFWADLSQKAIFSATIDARDKVGRHVKMIDNVYNPAAIAVDWVYKNIYWT 668
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDW 343
D + + A +DG+ IL + L E ++A+D +G +Y W+DW
Sbjct: 669 DVASKTISV----ATLDGTKRKILFNSDLREPASIAVDPLSGFVY-----------WSDW 713
Query: 344 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403
GE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+
Sbjct: 714 GEPAKIEKAGMNGLDRRPLVTVDIQWPNGITLDLVKSRLYWLDSKLHMLSSVDLNGQDRR 773
Query: 404 QVI 406
V+
Sbjct: 774 IVL 776
>gi|37728099|gb|AAO92396.1| vitellogenin receptor [Morone americana]
Length = 844
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 150/300 (50%), Gaps = 44/300 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ ++KVC+ DCP+ +DE C+L EC G CS+ C +G C C PG L
Sbjct: 327 ECIEMSKVCNKVRDCPDWSDEPIKECNLNECLLNNGGCSHICKDMVIGFECDCTPGLQLI 386
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS- 121
D TC D+NEC PG CSQ+C N KG Y C C+ GY ++ CKA+ + +
Sbjct: 387 -DHKTCGDINECLNPGICSQICINLKGGYKCECHNGYQMDPTTGVCKAVGKEPCLIFTNR 445
Query: 122 ------------------------------NRHSILVADLEEKG-----KDHRAQ----D 142
N+ I ADL +K D R + +
Sbjct: 446 RDIRRLGLERKEYTQIVEQQRNTVALDADFNQQMIFWADLGQKAIFSTVLDKRVEVGTHN 505
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
V++ + G+A DWI ++YW D I V + NGT + VL + +P + +DP
Sbjct: 506 KVINNVQTPVGIAVDWIYKNLYWSDLGTKTISVANFNGTKQKVLFNRGLKEPASIAVDPL 565
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W+DWGE +IE+ GM+G +R ++++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 566 SG--FLYWSDWGEPAKIEKSGMNGVDRQVLVASDIQWPNGITLDLIKGRLYWVDSKLHML 623
>gi|194769522|ref|XP_001966853.1| GF19243 [Drosophila ananassae]
gi|190618374|gb|EDV33898.1| GF19243 [Drosophila ananassae]
Length = 1958
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 150/314 (47%), Gaps = 58/314 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-DLAECKHKFGLCSNTCHPTPLG-ALCTCPPGEILS 62
C+ L+ CDG DC + +DE GC +CK K + TCH P G A C CP G +
Sbjct: 280 CLPLSDACDGHRDCSDDSDEAEGCHSPPDCKTKKCPPNATCHMMPSGGAECHCPVGFRQA 339
Query: 63 NDSVTCQDMNEC-----EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHS--- 114
C D++EC EQ CSQ C N G + C C+EGY L DN TC+A+ S
Sbjct: 340 KFEDKCVDIDECQESEQEQRDVCSQKCENQSGGFQCVCDEGYHLARDNRTCRAMATSSST 399
Query: 115 --AAFLIISNRHSILVADLEE--------------------------------------- 133
A L+ + + +++ L+E
Sbjct: 400 DQAPLLLYTTQMTVMGMHLQEDNDRNHVFLVAGNLTKVIGVAYDGSHIYWTNIQNEAESL 459
Query: 134 ---KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
KG +A+ ++ SGLD E LA DW+ +IY+ D+ + I VC +G N VL +
Sbjct: 460 VRAKGDGSQAETLLTSGLDAPEDLAVDWLTQNIYFSDNAMRHIAVCSHDGLNCAVLVTQD 519
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ QPR + L P G +FWTDWG P I R MDG+ I+S I+WPNG+ LD+ +
Sbjct: 520 VHQPRSLALWPQRG--LMFWTDWGVRPMIARASMDGTRSRPIVSDNIHWPNGIALDMHQQ 577
Query: 251 --RVYFADSKLDFI 262
R+Y+ D+KL +
Sbjct: 578 QGRIYWVDAKLGSV 591
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 136/303 (44%), Gaps = 62/303 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV++++VC+G DC NG DEGP C A K C + C TP GA+C+C G L D
Sbjct: 1352 CVDMSRVCNGFPDCSNGMDEGPQCTTACSKSS---CQHKCRATPSGAICSCHDGYRLDGD 1408
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS--- 121
+C D++EC++ C+Q+C NT GSY C C+ ++L D +CK+++ ++A L S
Sbjct: 1409 QRSCVDVDECQEQQPCAQLCENTLGSYQCQCHADFMLRQDRVSCKSLHAASALLFTSYNE 1468
Query: 122 -------------------NRHSILVADLEEK-GKDHRAQDIVVSGLDL-----VEGLAY 156
+R S D++ + G +D ++ +DL + GLA
Sbjct: 1469 VRNMTEQPVMLEVAWSANDSRISGFDVDVKRQVGYFSSEEDGLLYQIDLKNKQRIRGLAV 1528
Query: 157 --------DWIGGHIYWLD--SRLNRIEVCD-ENGT-NRIVLAKDNITQPRGMMLDPSPG 204
DW G++Y L S ++VC E G RIV + PR + G
Sbjct: 1529 DAPTKLSLDWATGNVYILSGGSGALEVQVCSFEAGMCGRIV----KVKSPRHLKHLAVDG 1584
Query: 205 TR-WLFWTDWGENPRIERIG----------MDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
LF+ R E +G +DGS ++ + + LT D + +Y
Sbjct: 1585 YHSRLFYVAL----RSESLGHSQSELHMSRLDGSRHELLLQRSDSYVSALTTDPHQQLLY 1640
Query: 254 FAD 256
F D
Sbjct: 1641 FVD 1643
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 99/448 (22%), Positives = 169/448 (37%), Gaps = 82/448 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ L +CDG+ DC + +DE GC+ + + P G L CP G L
Sbjct: 194 CLPLELMCDGRADCSDRSDELAGCERQKTEANC---------PPEGHL--CPNGRCLRRR 242
Query: 65 SVTCQDMNEC----EQPGYCSQMCTNTKGSYICSCNEGYVLEYD---------------- 104
C ++C ++ G C +C G ++C E + D
Sbjct: 243 QWLCDGHDDCGDGSDEKG-CENLCQPQMGKFMCRNKEACLPLSDACDGHRDCSDDSDEAE 301
Query: 105 ---------------NHTCKAINHSAA--FLIISNRHSIL---VADLEEKGKDHRAQDIV 144
N TC + A + R + D++E + + Q V
Sbjct: 302 GCHSPPDCKTKKCPPNATCHMMPSGGAECHCPVGFRQAKFEDKCVDIDECQESEQEQRDV 361
Query: 145 VSGLDLVEGLAYDWIGGHIYWL--DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
S + + + Y L D+R R + +L GM L
Sbjct: 362 CSQKCENQSGGFQCVCDEGYHLARDNRTCRAMATSSSTDQAPLLLYTTQMTVMGMHLQED 421
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+F G ++ + DGS+ IYW N + R S+ + +
Sbjct: 422 NDRNHVFLV-AGNLTKVIGVAYDGSH--------IYWTNIQNEAESLVRAKGDGSQAETL 472
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
L+ ++ + + +Y+ D I + DG N ++LV+ +++ +L L
Sbjct: 473 LTSGLDAPEDLAVDWLTQNIYFSDNAMR----HIAVCSHDGLNCAVLVTQDVHQPRSLAL 528
Query: 323 --ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
+ G+ +FWTDWG P I R MDG+ I+S I+WPNG+ LD+ +
Sbjct: 529 WPQRGL-----------MFWTDWGVRPMIARASMDGTRSRPIVSDNIHWPNGIALDMHQQ 577
Query: 381 --RVYFADSKLDFIDFCNYDGTGRQQVI 406
R+Y+ D+KL + DG+GR+ ++
Sbjct: 578 QGRIYWVDAKLGSVQTVRIDGSGRRTIL 605
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 139 RAQDIVVSGLDLVEGLAYDW--IGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
R++ IV + G+A D G IYW+D++L ++ +G+ R + + P G
Sbjct: 555 RSRPIVSDNIHWPNGIALDMHQQQGRIYWVDAKLGSVQTVRIDGSGRRTILDGVLKHPYG 614
Query: 197 MMLDPSPGTRWLFWTDW 213
+ L LFW+DW
Sbjct: 615 LALFED----QLFWSDW 627
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 112/286 (39%), Gaps = 33/286 (11%)
Query: 27 GCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMC-- 84
GC A C H F L + P G C CP G L+ D C + ++ Q
Sbjct: 669 GCQTASCSH-FCLLAE---PEAGGHSCACPDGMRLAADQQRCIRTEKRQRLFIGMQRVLL 724
Query: 85 ---TNTKGSYICSCNEGYVLE--YDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHR 139
G + S + +VL+ D +N + +I NR I+ E +
Sbjct: 725 EIEHTAFGRH--SVSASHVLDGFIDEMVFNPVN--GSLIIADNRQRIIF----EYHPAVK 776
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ-PRGMM 198
+ +VS L V LA+D + +IYW D+ +E+ R ++ + P G+
Sbjct: 777 YMERLVSNLGNVSALAFDHLSRNIYWADAEKGVVELLSLQTRERALIRLFPGQEWPVGLA 836
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN--GLTLDIATRRVYFAD 256
+ P G ++ I+RI + G + + L +D T ++++D
Sbjct: 837 VVPGEGHLYVLLKSR-RRSHIDRIPLSGKGEQVHVVEDDLGDDDFKLAVDPETHTLFWSD 895
Query: 257 S---KLDFIDCKSLE-------IKTNVNYSTIFRKLYWIDEGGNGV 292
S ++ + D ++++ ++ + + + L+W + NG+
Sbjct: 896 SDLGRISYTDYRTVQPQIFRGKLRRPYALALVQQDLFWSEMNSNGI 941
>gi|119874450|gb|ABM05723.1| vitellogenin receptor [Oryzias latipes]
Length = 802
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 146/300 (48%), Gaps = 44/300 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++++KVC+ DCP+ +DE C++ EC G CS+ C +G C C PG L
Sbjct: 294 ECIDMSKVCNKVRDCPDWSDEPIKECNVNECLLNNGGCSHICKDMVIGFECDCTPGLQLI 353
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS- 121
D TC D+NEC PG CSQ+C N KG Y C C+ GY ++ CKA+ + +
Sbjct: 354 -DHKTCGDINECMNPGICSQICINLKGGYKCECHNGYQMDPTTGVCKAVGKEPCLIFTNR 412
Query: 122 ------------------------------NRHSILVADLEEKG---------KDHRAQD 142
N+ +I ADL +K D
Sbjct: 413 RDVRRLGLERKEYTQIVKQQRNAVALDADFNQQTIFWADLGQKAIFSTVLDKRGDVGTHK 472
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
V+ + G+A DWI + YW D I V + NGT + VL + +P + +DP
Sbjct: 473 TVIENVQTPVGIAVDWIYRNFYWTDLGTKTISVSNFNGTIQKVLFNQGLKEPASIAVDPL 532
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W+DWGE +IE+ GM+G +R ++ T I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 533 SG--FLYWSDWGEPAKIEKSGMNGVDRQVLVETDIQWPNGITLDLIKGRLYWVDSKLHML 590
>gi|410922593|ref|XP_003974767.1| PREDICTED: low-density lipoprotein receptor-related protein 1B-like
[Takifugu rubripes]
Length = 1200
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 172/365 (47%), Gaps = 60/365 (16%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
+ C++L VC+G +C +G+DEG C + + CS +C+ TP G C C G L
Sbjct: 286 SQECLDLALVCNGYINCADGSDEGGSCQTTCTEDEMNHCSQSCYSTPQGTRCHCSAGYRL 345
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH-------- 113
D +C D++EC+ PG CSQ+C N+ GSY C C+ GY+ E + H CK
Sbjct: 346 IEDGRSCSDIDECKSPGGCSQLCINSPGSYHCDCHPGYLKEANGHDCKIRGEPLLLTSIQ 405
Query: 114 -----------SAAFLIISNRHSILVADLEEKGK-----------------DHRAQDIVV 145
S L S + +IL D + K + DH+ ++
Sbjct: 406 TDLFLVGLRGGSLDVLSSSAKKAILSVDYDWKEQRVFWVTVDTDSIRWSSLDHKTTGTLI 465
Query: 146 SGLDLVEGLAYDWIGGHIYWLD---SRLNRIEVCDENGTNRI---VLAKDNITQPRGMML 199
G+ + +A DW+G ++YW+D S++ I + D+N + V+ +++ QPR + L
Sbjct: 466 KGI-RADSVAVDWLGRNLYWIDGVNSQIVAISL-DKNAVESLDHSVILDEDLDQPRSLAL 523
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +FWT+ G +IER GMDGS R ++++ + WP G+ +D RVY+AD +L
Sbjct: 524 LPQKG--LMFWTEIGNVVKIERAGMDGSERRAVVNSSLGWPGGVAVDAIAERVYWADERL 581
Query: 260 DFI--------DCKSLEIKTNVN---YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
I D + L+ K N + LYW D V + G N+ I
Sbjct: 582 GAIGSAALDGNDIRILQTKDTSNPFSLAVFNDMLYWTDAKKRVVH---SAHKVSGKNSHI 638
Query: 309 LVSGQ 313
L+ Q
Sbjct: 639 LLKRQ 643
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 40/233 (17%)
Query: 222 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT---------- 271
+G+ G + + S+ + D +RV++ D I SL+ KT
Sbjct: 411 VGLRGGSLDVLSSSAKKAILSVDYDWKEQRVFWVTVDTDSIRWSSLDHKTTGTLIKGIRA 470
Query: 272 -NVNYSTIFRKLYWIDEGGNG--VPLKIGKANMDGSNASILVSGQLYE--ALALDLENGM 326
+V + R LYWID G N V + + K ++ + S+++ L + +LAL + G+
Sbjct: 471 DSVAVDWLGRNLYWID-GVNSQIVAISLDKNAVESLDHSVILDEDLDQPRSLALLPQKGL 529
Query: 327 LYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 386
+ FWT+ G +IER GMDGS R ++++ + WP G+ +D RVY+AD
Sbjct: 530 M-----------FWTEIGNVVKIERAGMDGSERRAVVNSSLGWPGGVAVDAIAERVYWAD 578
Query: 387 SKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYS 439
+L I DG D+ + T D +L + N MLY++
Sbjct: 579 ERLGAIGSAALDGN--------DIRILQTKDTSN-----PFSLAVFNDMLYWT 618
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 98/243 (40%), Gaps = 30/243 (12%)
Query: 40 CSNTCHPTP-LGALCTCPPGEILSNDSVTCQDMNECE-----QPGYCSQMCTNTKGS--- 90
CS+ C P A+C CP G +L+ D +TC + P ++ NT
Sbjct: 668 CSHLCVLAPGPKAVCKCPFGLLLAEDGLTCSSFVDSAFLLTLSPSSVTKS-RNTAAPLKD 726
Query: 91 -------YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDI 143
+ S NE +++Y +I +L S+ L++ R Q +
Sbjct: 727 WPEHLALQVPSVNEAAIMDY------SIRDHTLYLTDDGTTSLNSFKLKDTDLFPRGQLL 780
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ G + + +A DW+ ++YW ++ R++V + VL K+ I + + L P P
Sbjct: 781 KLLG-NTITAMALDWVTLNVYWSSNKQPRLQVTAIAKAHTAVLIKEGIGRMESIALHP-P 838
Query: 204 GTRWLF----WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
R F D +E MDG+ R ++ P L+ +Y+AD++L
Sbjct: 839 SGRLCFANLGLQDTDTMASVECANMDGTGRR-VLWKDCVGPTSLSFSHNGETIYWADTEL 897
Query: 260 DFI 262
I
Sbjct: 898 GNI 900
>gi|410950508|ref|XP_003981947.1| PREDICTED: low-density lipoprotein receptor [Felis catus]
Length = 866
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 154/302 (50%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ L KVC+ DC + +DE C+ EC G CS+ C+ +G C CP G L
Sbjct: 290 ECITLDKVCNSVRDCRDWSDEPLKECETDECLDNRGGCSHICNDLKIGYECLCPEGFQLV 349
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC+ P CSQ+C N +GSY C C G+ L+ CKA+ + A+L +N
Sbjct: 350 -DQRRCEDIDECQDPDVCSQLCVNLEGSYKCECEAGFQLDPLTKACKAVG-TIAYLFFTN 407
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L+ ++ +
Sbjct: 408 RHEVRKMTLDRSEYTSLIPNLKNVVALDTEVASNRIYWSDLSQRKIYSTQIDRAPGFSSY 467
Query: 142 DIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D VVS L +GLA DWI +IYW DS L + V D G R L K+ ++PR +++D
Sbjct: 468 DTVVSEDLQAPDGLAVDWIHSNIYWTDSILGTVSVADTKGVKRKTLFKEKGSKPRAIVVD 527
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG I++ G++G + ++++ I WPNG+TLD++ R+Y+ DSKL
Sbjct: 528 PVHG--FMYWTDWGTPAEIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLH 585
Query: 261 FI 262
I
Sbjct: 586 SI 587
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD--NITQPRGMMLD 200
+V + G+ D GG +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 557 LVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSIDVNGGNRKTVLEDEKKLAHPFSLAIF 616
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 617 EDK----VFWTD 624
>gi|410897255|ref|XP_003962114.1| PREDICTED: low-density lipoprotein receptor-related protein 1B-like
[Takifugu rubripes]
Length = 3996
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 128/409 (31%), Positives = 168/409 (41%), Gaps = 97/409 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+GK DC + +DEGP CDL C G CS+ C P G +C CPPG L +
Sbjct: 1094 CLTPDKICNGKVDCADRSDEGPICDL--CLVARGGCSHQCTVAPGKGVVCFCPPGLHLDS 1151
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
+ TC+ ++ C + CSQ+C K + CSC G+ L+ D +C + + AF+I S R
Sbjct: 1152 SNKTCEVVDYCSRHLKCSQLCEQYKTTVKCSCYPGWTLDPDGDSCHSTDPFEAFIIFSIR 1211
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1212 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNHSLLYWTDVVEDKIYRGRLSESGGVTGIE 1271
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGLA DWI G +YW+DS L++IEV NG R L + PR + LDP
Sbjct: 1272 VVVQHGLATPEGLAVDWITGKLYWIDSNLDQIEVAKLNGDMRTTLIAGGMEHPRAIALDP 1331
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW PRIE M G R + WPNGLTLD +R+ + D++
Sbjct: 1332 GQGI--LFWTDWDATFPRIEAASMSGVGRHIVFKDMETGAWPNGLTLDHLEKRIVWTDAR 1389
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--E 316
D IF LY DGS ++ G Y
Sbjct: 1390 SD----------------AIFSALY------------------DGSGVIEILRGHEYLSH 1415
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ L G +Y WTDW N G N + I T
Sbjct: 1416 PFAVSLYGGNVY-----------WTDWRTNTLARANKWTGQNVTVIQKT 1453
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 144/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC++ +CDG+ DC + +DE C+L EC + C+ C P+G C C PG L
Sbjct: 2846 RCISERSLCDGRDDCGDRSDE-RNCNLNECLNRRVSGCTQDCQDFPVGYKCKCWPGFHLK 2904
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY-VLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GS+ C C +GY LE +TCKA++ FLI++
Sbjct: 2905 DDGKTCVDVDECAATLPCSQRCINTYGSFKCLCVDGYEALERSPNTCKALSAEEPFLIMA 2964
Query: 122 NRH--------------------SILVADLEEKGK-----------DHRAQDIVVSGLDL 150
+ H +I+ D + K + + + ++G DL
Sbjct: 2965 DHHEIRKLSVDGSNYTILKQGLNNIIHIDFDYKKEFIYWVDSTRPSGRKINRMRLNGSDL 3024
Query: 151 V--------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
LA DWIG ++YW D+ +EV NG +L + P + LDP
Sbjct: 3025 KIVHRTAVPSALAVDWIGKNLYWCDAERKTLEVSRANGLYPTILISSGLRNPSDLALDPQ 3084
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G ++FW D E P I RIGMDG + II +IY P+ LT+D +R+Y+AD
Sbjct: 3085 AG--YVFWVDCCEPPHIGRIGMDGRGQVVIIDKEIYNPSALTIDYTNKRIYWAD 3136
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 133/261 (50%), Gaps = 41/261 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C++ K+C+G DC +G DEG C +L H+ C C T G C C G +
Sbjct: 116 KCIHFNKLCNGARDCEDGFDEGVHCRELLSACHEL-RCRYGCVMTRNGTFCFCADGFEVG 174
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D +C+D +EC G CSQ C NT GSY CSC EGYVL+ D +C+A
Sbjct: 175 EDGTSCRDHDECATYGACSQTCRNTYGSYSCSCTEGYVLQPDRISCRA------------ 222
Query: 123 RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
QD V+ +A DW+ G+ Y++D ++I C++ G
Sbjct: 223 -----------------RQD--------VDNMAIDWLTGNRYFIDRVTDKIFACNQAGDT 257
Query: 183 RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 242
+ + ++ P+G+ LDP G LF+TD+G ++ R MDG+NR+ ++ +I P
Sbjct: 258 CVTVLHLDLQNPKGIALDPLMGM--LFFTDYGNVAKVARCNMDGTNRTQLVDYRIELPTA 315
Query: 243 LTLDIATRRVYFADSKLDFID 263
+ LD+ + VY+AD+ LD+ID
Sbjct: 316 VALDVVRKLVYWADAYLDYID 336
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 176/428 (41%), Gaps = 104/428 (24%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---------- 126
G CSQ+C T + + CSC GY L D +C+ ++ +FLI S +
Sbjct: 1787 GGCSQLCLPTSENTRSCSCTVGYNLRSDRVSCEGVD---SFLIYSIHEGVRGVALDPNDN 1843
Query: 127 ------LVADLEEKGKDHRA-------------------------QDIVVSGLDLVEGLA 155
+ L G D A +D++ +G+ VEG+A
Sbjct: 1844 SEALMPITGTLFAVGVDFHAGNDTVYWTDMGLNRISRAKRDQTWREDVITTGISRVEGIA 1903
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G++YW D N IE+ NG R V+ + + QPR + + P G +LFWT+WG+
Sbjct: 1904 VDWIAGNLYWTDHGFNLIEISRLNGAYRSVVISEGLDQPRAIAVHPQKG--YLFWTEWGK 1961
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
P I R +DGS++ T++++ + WPNG+++D +Y+ D++ D I+ +LE N
Sbjct: 1962 IPCIGRSRLDGSDQVTLVNSGVMWPNGISIDYEENTLYWCDARTDRIEKINLETGENREI 2021
Query: 273 ---------VNYSTIFRKLYWIDEG----------------------GNGVPLK----IG 297
+ + +YW D G GV LK
Sbjct: 2022 VLSAANVDLFSVAVFGPYIYWSDRAHSNGSIRRGFKTDTSEPLTMRSGLGVNLKDVTVFN 2081
Query: 298 KANMDGSNASILVSG---QLYEALA-----LDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N +G QL L +G L C R+ + + E +
Sbjct: 2082 RGREKGTNPCARSNGGCQQLCFHLGSGRRTCSCAHGRLAEDGFACERYEGYLLYSERTIL 2141
Query: 350 ERIGM-DGSNRSTIIS---TKIYWPNGLTLDI-------ATRRVYFADSKLDFIDFCNYD 398
+ I + D S+ ++ + ++ + + L T R++++D+ I N D
Sbjct: 2142 KSIHLSDESDLNSPVQPFENPAFFKSAIALAFDYSQTTAGTNRIFYSDAHFGNIQMINDD 2201
Query: 399 GTGRQQVI 406
TGR V+
Sbjct: 2202 WTGRSVVV 2209
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 104/241 (43%), Gaps = 55/241 (22%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA-DLE 132
+PG CS +C + + S C C GY L D +CK R I+ D+
Sbjct: 430 KPGGCSHICLLSGSYKSRTCRCPTGYSLGPDGQSCKKPKKDLFLFYGKGRPGIIRGLDMN 489
Query: 133 EKGKDH-----------RAQD------------------------------IVVSGLDLV 151
K D RA D I+ LD V
Sbjct: 490 IKSSDEHMEPIEDLVNPRAIDYHAELGHIYFADTTSFLIGRQKLDGSGRETILKDELDNV 549
Query: 152 EGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
EG++ DWIG ++YW + + I D R L + N++ PR +++DP W+
Sbjct: 550 EGISVDWIGNNLYWTNDGYRKTISIARLDRASQTRKTLLEGNMSHPRAIVVDPP--NSWM 607
Query: 209 FWTDWGENP------RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+WTDW E+ RIE+ MDGSNR +++ + WPNGLTLD +T +Y+ D+ D I
Sbjct: 608 YWTDWEEDEVNDSIGRIEKAWMDGSNRRIFVTSNMLWPNGLTLDHSTSTMYWCDAYYDHI 667
Query: 263 D 263
+
Sbjct: 668 E 668
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 17/149 (11%)
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EA 317
D I C++ + N+ + Y+ID V KI N G ++ L +
Sbjct: 216 DRISCRARQDVDNMAIDWLTGNRYFIDR----VTDKIFACNQAGDTCVTVLHLDLQNPKG 271
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
+ALD GML F+TD+G ++ R MDG+NR+ ++ +I P + LD+
Sbjct: 272 IALDPLMGML-----------FFTDYGNVAKVARCNMDGTNRTQLVDYRIELPTAVALDV 320
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ VY+AD+ LD+ID +YDG R ++
Sbjct: 321 VRKLVYWADAYLDYIDVVDYDGKNRHSIV 349
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
Y + LYW + I + +D S A + +AL E+ + +C
Sbjct: 2220 YHRAWDTLYWT----SSTTSTISRHTLDQSRAGAFAREAV---VALSEEDHPHVLALDEC 2272
Query: 335 TRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
+FWT+W E P I R + G N IIS+++ PNGLT+D ++YF+D L I+
Sbjct: 2273 QNLMFWTNWNEQRPSIMRSTLAGKNMRIIISSEVLTPNGLTVDHKAEKLYFSDGSLGKIE 2332
Query: 394 FCNYDGTGRQQVI 406
C+YDG+ R ++
Sbjct: 2333 RCDYDGSSRYVIV 2345
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT---- 192
D + +VV + VEGLAY +YW S + I + + A++ +
Sbjct: 2201 DWTGRSVVVENVGSVEGLAYHRAWDTLYWTSSTTSTISRHTLDQSRAGAFAREAVVALSE 2260
Query: 193 --QPRGMMLDPSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
P + LD +FWT+W E P I R + G N IIS+++ PNGLT+D
Sbjct: 2261 EDHPHVLALDEC--QNLMFWTNWNEQRPSIMRSTLAGKNMRIIISSEVLTPNGLTVDHKA 2318
Query: 250 RRVYFADSKLDFID 263
++YF+D L I+
Sbjct: 2319 EKLYFSDGSLGKIE 2332
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 36/283 (12%)
Query: 69 QDMNECEQ---PGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
Q N CE G CS +C N + C+C L + +C A+ FL+ R
Sbjct: 1470 QASNPCETNDGRGPCSHLCLINYNRTASCTCPHLMKLSPNKQSCFAVKR---FLLYVRRS 1526
Query: 125 SILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
I D+++ + + V +D V + YD IYW D + I+ NGT
Sbjct: 1527 EIRGVDIDDPYMNIMTA-LTVPDIDDVTVVDYDATEERIYWADIKTQTIKRAFINGTQLE 1585
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIIS--------- 234
+ +I R + LD +R L+W + + +I DGS +++II
Sbjct: 1586 TIISADIVNCRSLALDWL--SRNLYWLSSENDESQINVARFDGSLKTSIIHGIDKPRCLV 1643
Query: 235 -----TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
KIYW +G T+++A+ + ++SK+ + + + +++Y+ KLYWI
Sbjct: 1644 VHPARGKIYWTDGNTINMAS--MDGSNSKVLHQN-QRDPVGLSIDYTA--SKLYWI-SSA 1697
Query: 290 NGVPLKIGKANMDGSNASIL--VSGQLYEALALDLENGMLYYS 330
NG I + N+DGS L + L + AL + G L+++
Sbjct: 1698 NGT---INRCNLDGSGLEALETLKRDLVKGTALAVMGGKLWWA 1737
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 140/361 (38%), Gaps = 72/361 (19%)
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
++ G+D L G IYW D N I + +G+N VL + N P G+ +D +
Sbjct: 1632 IIHGIDKPRCLVVHPARGKIYWTDG--NTINMASMDGSNSKVLHQ-NQRDPVGLSIDYTA 1688
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI- 262
L+W N I R +DGS + + K G L + ++++AD +
Sbjct: 1689 SK--LYWIS-SANGTINRCNLDGSGLEALETLKRDLVKGTALAVMGGKLWWADEDSGQLG 1745
Query: 263 -----DCKSLEIKTNVNYSTIFRKLY-----------WIDEGGN---------------- 290
D ++L I N I K+Y ++ GG
Sbjct: 1746 TVTKRDGRNLAILRNKTAGVIHMKVYDREGQKGRNPCQVNNGGCSQLCLPTSENTRSCSC 1805
Query: 291 --GVPLKIGKANMDGSNASILVS-GQLYEALALDLENGMLYYSTLKCTRW---------- 337
G L+ + + +G ++ ++ S + +ALD + + T +
Sbjct: 1806 TVGYNLRSDRVSCEGVDSFLIYSIHEGVRGVALDPNDNSEALMPITGTLFAVGVDFHAGN 1865
Query: 338 --LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
++WTD G N RI R D + R +I+T I G+ +D +Y+ D + I+
Sbjct: 1866 DTVYWTDMGLN-RISRAKRDQTWREDVITTGISRVEGIAVDWIAGNLYWTDHGFNLIEIS 1924
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKTPLFCITR 455
+G R VI L + A+A+ + G L+++ E+ K P CI R
Sbjct: 1925 RLNGAYRSVVISEGL-----------DQPRAIAVHPQKGYLFWT----EWGKIP--CIGR 1967
Query: 456 N 456
+
Sbjct: 1968 S 1968
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 43/220 (19%)
Query: 236 KIYWPNGLTLDIATRRVYFADSKL------DFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+IYW + T I +R + ++L D ++C+SL + + R LYW+
Sbjct: 1563 RIYWADIKTQTI--KRAFINGTQLETIISADIVNCRSLAL------DWLSRNLYWLSSEN 1614
Query: 290 NGVPLKIGKANMDGSNASILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ + + A DGS + ++ G L + G +Y W +
Sbjct: 1615 DESQINV--ARFDGSLKTSIIHGIDKPRCLVVHPARGKIY--------------WTDGNT 1658
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I MDGSN S ++ P GL++D ++Y+ S I+ CN DG+G +
Sbjct: 1659 INMASMDGSN-SKVLHQNQRDPVGLSIDYTASKLYWISSANGTINRCNLDGSG------L 1711
Query: 409 DLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKT 448
+ + DL V AL + G L+++ E + L T
Sbjct: 1712 EALETLKRDL-----VKGTALAVMGGKLWWADEDSGQLGT 1746
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 8/122 (6%)
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
R SI+ + L GK+ R I+ S + GL D +Y+ D L +IE CD +G+
Sbjct: 2284 QRPSIMRSTL--AGKNMRI--IISSEVLTPNGLTVDHKAEKLYFSDGSLGKIERCDYDGS 2339
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
+R V+ K G+ + +++W+DW + GS+ + + + P
Sbjct: 2340 SRYVIVKSGPGNFYGLAIHAD----FIYWSDWARRSVLRSNKYTGSDTKVLRADIPHQPM 2395
Query: 242 GL 243
G+
Sbjct: 2396 GI 2397
>gi|21750962|dbj|BAC03874.1| unnamed protein product [Homo sapiens]
Length = 752
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 171/362 (47%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 209 ECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 268
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 269 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 325
Query: 122 NRHSILVADLEEK---------------GKDHRAQDIV---------------------V 145
NR I LE K D AQ + V
Sbjct: 326 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 385
Query: 146 SGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+D V +A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 386 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 445
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 446 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHML 503
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 504 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 560
Query: 310 VS 311
V+
Sbjct: 561 VN 562
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 32/204 (15%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
I +IG++ ++ ++ L DIA +++++AD I S++ K + I
Sbjct: 330 IRKIGLERKEYIQLVE-QLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHVKMI 388
Query: 279 --------------FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDL 322
++ +YW D + + A +DG+ L + L E ++A+D
Sbjct: 389 DNVYNPAAIAVDWVYKTIYWTDAASKTISV----ATLDGTKRKFLFNSDLREPASIAVDP 444
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+G +Y W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+
Sbjct: 445 LSGFVY-----------WSDWGEPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRL 493
Query: 383 YFADSKLDFIDFCNYDGTGRQQVI 406
Y+ DSKL + + +G R+ V+
Sbjct: 494 YWLDSKLHMLSSVDLNGQDRRIVL 517
>gi|114675445|ref|XP_001167232.1| PREDICTED: low-density lipoprotein receptor isoform 2 [Pan
troglodytes]
Length = 819
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 153/302 (50%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 247 ECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLV 306
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
C+D++EC+ P CSQ+C N +G Y C C EG+ L+ CKA+ S A+L +N
Sbjct: 307 AQR-RCEDIDECQHPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG-SIAYLFFTN 364
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L ++ +
Sbjct: 365 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY 424
Query: 142 DIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D V+S + +GLA DWI +IYW DS L + V D G R L ++N ++PR +++D
Sbjct: 425 DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVD 484
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL
Sbjct: 485 PVHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 542
Query: 261 FI 262
I
Sbjct: 543 SI 544
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLD 200
+V + G+ D + G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 514 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTVLEDEKRLAHPFSLAVF 573
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 574 EDK----VFWTD 581
>gi|432889261|ref|XP_004075190.1| PREDICTED: very low-density lipoprotein receptor [Oryzias latipes]
Length = 847
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 146/300 (48%), Gaps = 44/300 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++++KVC+ DCP+ +DE C++ EC G CS+ C +G C C PG L
Sbjct: 330 ECIDMSKVCNKVRDCPDWSDEPIKECNVNECLLNNGGCSHICKDMVIGFECDCTPGLQLI 389
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS- 121
D TC D+NEC PG CSQ+C N KG Y C C+ GY ++ CKA+ + +
Sbjct: 390 -DHKTCGDINECMNPGICSQICINLKGGYKCECHNGYQMDPTTGVCKAVGKEPCLIFTNR 448
Query: 122 ------------------------------NRHSILVADLEEKG---------KDHRAQD 142
N+ +I ADL +K D
Sbjct: 449 RDVRRLGLERKEYTQIVKQQRNAVALDADFNQQTIFWADLGQKAIFSTVLDKRGDVGTHK 508
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
V+ + G+A DWI + YW D I V + NGT + VL + +P + +DP
Sbjct: 509 TVIENVQTPVGIAVDWIYRNFYWTDLGTKTISVSNFNGTIQKVLFNQGLKEPASIAVDPL 568
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W+DWGE +IE+ GM+G +R ++ T I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 569 SG--FLYWSDWGEPAKIEKSGMNGVDRQVLVETDIQWPNGITLDLIKGRLYWVDSKLHML 626
>gi|331702865|emb|CBX54721.1| vitellogenin receptor [Dicentrarchus labrax]
Length = 844
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 149/300 (49%), Gaps = 44/300 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ ++KVC+ DCP+ +DE C+L EC G CS+ C +G C C PG L
Sbjct: 327 ECIEMSKVCNKVRDCPDWSDEPIKECNLNECLLNNGGCSHICKDMVIGFECDCTPGLQLI 386
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS- 121
D TC D+NEC PG CSQ+C N KG Y C C+ GY ++ CKA+ + +
Sbjct: 387 -DHKTCGDINECLNPGICSQICINLKGGYKCECHNGYQMDPTTGVCKAVGKEPCLIFTNR 445
Query: 122 ------------------------------NRHSILVADLEEKG-----KDHRAQ----D 142
N+ I ADL +K D R + +
Sbjct: 446 RDIRRLGLERKEYTQIVEQQRNTVALDADFNQQMIFWADLGQKAIYSTVLDKRGEVGTHN 505
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
V+ + G+A DWI ++YW D I V + NGT + VL + +P + +DP
Sbjct: 506 KVIDNVQTPVGIAVDWIYKNLYWSDLGTKIISVANFNGTKQKVLFNRGLKEPASIAVDPL 565
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W+DWGE +IE+ GM+G +R ++++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 566 SG--FLYWSDWGEPAKIEKSGMNGVDRQVLVASDIQWPNGITLDLIKGRLYWVDSKLHML 623
>gi|307775414|ref|NP_001182728.1| low-density lipoprotein receptor isoform 3 precursor [Homo sapiens]
gi|194390612|dbj|BAG62065.1| unnamed protein product [Homo sapiens]
Length = 819
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 153/302 (50%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 247 ECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLV 306
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
C+D++EC+ P CSQ+C N +G Y C C EG+ L+ CKA+ S A+L +N
Sbjct: 307 AQR-RCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG-SIAYLFFTN 364
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L ++ +
Sbjct: 365 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY 424
Query: 142 DIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D V+S + +GLA DWI +IYW DS L + V D G R L ++N ++PR +++D
Sbjct: 425 DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVD 484
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL
Sbjct: 485 PVHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 542
Query: 261 FI 262
I
Sbjct: 543 SI 544
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLD 200
+V + G+ D + G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 514 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF 573
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 574 EDK----VFWTD 581
>gi|114675441|ref|XP_001167447.1| PREDICTED: low-density lipoprotein receptor isoform 7 [Pan
troglodytes]
gi|410300406|gb|JAA28803.1| low density lipoprotein receptor [Pan troglodytes]
gi|410300408|gb|JAA28804.1| low density lipoprotein receptor [Pan troglodytes]
gi|410300410|gb|JAA28805.1| low density lipoprotein receptor [Pan troglodytes]
gi|410333799|gb|JAA35846.1| low density lipoprotein receptor [Pan troglodytes]
gi|410333801|gb|JAA35847.1| low density lipoprotein receptor [Pan troglodytes]
Length = 860
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 153/302 (50%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 288 ECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLV 347
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
C+D++EC+ P CSQ+C N +G Y C C EG+ L+ CKA+ S A+L +N
Sbjct: 348 AQR-RCEDIDECQHPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG-SIAYLFFTN 405
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L ++ +
Sbjct: 406 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY 465
Query: 142 DIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D V+S + +GLA DWI +IYW DS L + V D G R L ++N ++PR +++D
Sbjct: 466 DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVD 525
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL
Sbjct: 526 PVHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 583
Query: 261 FI 262
I
Sbjct: 584 SI 585
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLD 200
+V + G+ D + G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 555 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTVLEDEKRLAHPFSLAVF 614
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 615 EDK----VFWTD 622
>gi|358030301|ref|NP_001239587.1| low-density lipoprotein receptor isoform 2 precursor [Mus musculus]
Length = 810
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 152/301 (50%), Gaps = 46/301 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L KVCD DC + +DE C EC G CS+ C +G+ C CP G L
Sbjct: 289 ECISLDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHICKDLKIGSECLCPSGFRLV 348
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC++P CSQ+C N +GSY C C G+ ++ CKA+ S +L+ +N
Sbjct: 349 -DLHRCEDIDECQEPDTCSQLCVNLEGSYKCECQAGFHMDPHTRVCKAVG-SIGYLLFTN 406
Query: 123 RHSI-----------------------------------------LVADLEEKGKDHRAQ 141
RH + + + L ++ +
Sbjct: 407 RHEVRKMTLDRSEYTSLLPNLKNVVALDTEVTNNRIYWSDLSQKKIYSALMDQAPNLSYD 466
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
I+ L +GLA DWI +IYW DS + V D G R L ++ ++PR +++DP
Sbjct: 467 TIISEDLHAPDGLAVDWIHRNIYWTDSVPGSVSVADTKGVKRRTLFQEAGSRPRAIVVDP 526
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL
Sbjct: 527 VHG--FMYWTDWGTPAKIKKGGLNGVDIHSLVTENIQWPNGITLDLSSGRLYWVDSKLHS 584
Query: 262 I 262
I
Sbjct: 585 I 585
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 173/429 (40%), Gaps = 105/429 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC--KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ ++ CD + DC + +DE ++ +C +KF C GE +S
Sbjct: 249 CIHGSRQCDREHDCKDMSDELGCVNVTQCDGPNKF----------------KCHSGECIS 292
Query: 63 NDSVT-----CQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH 106
D V CQD NEC + G CS +C + K C C G+ L D H
Sbjct: 293 LDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHICKDLKIGSECLCPSGFRL-VDLH 351
Query: 107 TCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
C+ I+ S L +LE K + G D
Sbjct: 352 RCEDIDECQEPDTCSQ----LCVNLEGSYK-----------CECQAGFHMD--------- 387
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI-GMD 225
VC G+ +L N + R M LD S T L P ++ + +D
Sbjct: 388 ----PHTRVCKAVGSIGYLLFT-NRHEVRKMTLDRSEYTSLL--------PNLKNVVALD 434
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFA------DSKLDFIDCKSLEIKTNVNYSTIF 279
+ + + +IYW D++ +++Y A + D I + L + I
Sbjct: 435 ----TEVTNNRIYWS-----DLSQKKIYSALMDQAPNLSYDTIISEDLHAPDGLAVDWIH 485
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILV--SGQLYEALALDLENGMLYYSTLKCTRW 337
R +YW D VP + A+ G L +G A+ +D +G +Y
Sbjct: 486 RNIYWTD----SVPGSVSVADTKGVKRRTLFQEAGSRPRAIVVDPVHGFMY--------- 532
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
WTDWG +I++ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL I +
Sbjct: 533 --WTDWGTPAKIKKGGLNGVDIHSLVTENIQWPNGITLDLSSGRLYWVDSKLHSISSIDV 590
Query: 398 DGTGRQQVI 406
+G R+ ++
Sbjct: 591 NGGNRKTIL 599
>gi|410219638|gb|JAA07038.1| low density lipoprotein receptor [Pan troglodytes]
Length = 858
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 153/302 (50%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 288 ECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLV 347
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
C+D++EC+ P CSQ+C N +G Y C C EG+ L+ CKA+ S A+L +N
Sbjct: 348 AQR-RCEDIDECQHPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG-SIAYLFFTN 405
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L ++ +
Sbjct: 406 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY 465
Query: 142 DIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D V+S + +GLA DWI +IYW DS L + V D G R L ++N ++PR +++D
Sbjct: 466 DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVD 525
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL
Sbjct: 526 PVHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 583
Query: 261 FI 262
I
Sbjct: 584 SI 585
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLD 200
+V + G+ D + G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 555 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTVLEDEKRLAHPFSLAVF 614
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 615 EDK----VFWTD 622
>gi|340728805|ref|XP_003402704.1| PREDICTED: vitellogenin receptor-like isoform 2 [Bombus terrestris]
Length = 1668
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 170/357 (47%), Gaps = 54/357 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC++L C+ K +C + +DE C A+ K C + C TP GA C+C PG L
Sbjct: 86 RCISLNATCNEKDNCGDNSDEDIDACIKADASCKEARCQHNCRKTPEGAQCSCRPGYKLV 145
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA------------ 110
N+ +C+D+NEC G C Q C N+ GSY CSC GY L D TC+A
Sbjct: 146 NNQTSCEDVNECGNYGICDQECINSVGSYTCSCQPGYSLNDDKRTCQAEGGEGLMMFSIK 205
Query: 111 -------INHSAAFLIISN-RHSILV---------ADLEEKGK--------DHRAQDIVV 145
+N + + N +H++ + +D+E+ + + + IV
Sbjct: 206 SEIRGIYLNSRLYYPVTQNLQHAVAISLDANNVYWSDIEDGNEAIIKSLEDGSQREVIVT 265
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL + +A DW+ G+IY+ D I VC+ +G+ V+ K+ +PRG++L PS G
Sbjct: 266 AGLSSPDDMAVDWVTGNIYFTDGGYMHIGVCNNDGSYCTVIIKEQNDKPRGLVLLPSSG- 324
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
++W+ WG + I R GMDG N + ++S + PN L++D A R+Y+ D+K I+
Sbjct: 325 -LMYWSKWGMDSCILRAGMDGKNNTVLVSKDLELPNSLSIDYANERLYWIDAKAKVIESV 383
Query: 266 SLE-----------IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
L+ K + + KLYW D N + G N +LVS
Sbjct: 384 RLDGTDRKAILKDIAKRPFSLAVFENKLYWSDWISNTIQ---SCDKFTGKNWEVLVS 437
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 181/416 (43%), Gaps = 90/416 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ VCDGK DC + +DE C A C K+ C+N CH TP+G +C C G LSND
Sbjct: 1117 CLPFANVCDGKVDCSDRSDEFGQCATA-CT-KYNPCTNMCHKTPIGPVCGCRNGYQLSND 1174
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS--- 121
+C+D++EC+ CSQ+C NT GS+ CSC+E YV+ D +CK + +S
Sbjct: 1175 FKSCEDIDECKD-NVCSQICYNTNGSFTCSCHEEYVIRSDKISCKVAGSQMEIITVSSAD 1233
Query: 122 ------NRHSILVA----DLEEKGKDHRAQD-----------------------IVVSGL 148
N +SI V + E G D ++ V+GL
Sbjct: 1234 IRKLSPNLNSIQVVYEELNHEISGIDANTRENTIYWSNDNLGMVSKINIKTKERKTVTGL 1293
Query: 149 DLVEGLAYDWIGGHIYWLDSR-LNRIEVC--DENGTNRIVLAKDNITQPRGMMLDPSPGT 205
E LA DWI ++Y+ D+ + I+VC ++ ++V + R + + P
Sbjct: 1294 GRPEALAVDWITDNVYFNDNDYFSSIQVCNLEQQKCAKVVPIP---LKNRAVSIAIEPKE 1350
Query: 206 RWLFW--TDWGENPR----IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
WLFW T W R I R G+N + I+ + LT+D R+Y++D+
Sbjct: 1351 GWLFWSQTSWASYDRPMTEIYRSNTMGTNITAIVHRDLGIVLALTIDYTRSRLYWSDT-- 1408
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
F K I +N+DGSN I+++ +++AL+
Sbjct: 1409 -------------------FHK-------------NIESSNLDGSNRIIVLNTDVHQALS 1436
Query: 320 LDLENGMLYY---STLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
+ + LY+ +T K + + D ++ IG+ + IIS I P G
Sbjct: 1437 ISIYEDSLYWLMSTTGKVKKCKLYGD--KSCVTITIGISNIEKYFIISHPIRQPIG 1490
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 62/312 (19%), Positives = 116/312 (37%), Gaps = 75/312 (24%)
Query: 80 CSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI-LVADLEEKGK- 136
CSQ+C N+ SY C+C L DNHTC+A+ +I + I +L K K
Sbjct: 465 CSQLCLLNSANSYTCACTLDKELNSDNHTCRAVKKKTHLIIAAGSTFIDYYHELLGKPKI 524
Query: 137 ---------DHRAQDIVVSGL----------------------------DLVEGLAYDWI 159
A + + GL +++ G+ +D+I
Sbjct: 525 TTSDTLNHVTEVAYNPLTGGLLASDQLRDNIFHFNMQTGEEKSMMSIENEILGGMDFDYI 584
Query: 160 GGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRI 219
G ++Y D + IEV N + + + +P + L P + + E RI
Sbjct: 585 GNNLYLSDVKHKTIEVHSLNNNEKTIFYFQD--EPYDIALVPEESIMMVVFRT-NELYRI 641
Query: 220 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIF 279
+ + M+G G + I + + K+ Y +
Sbjct: 642 DLMNMNGV--------------GPRVTIEGNKTHLIGPKISLC------------YDRVL 675
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLF 339
+ L+W D+G +IG + G I +G L E ++L + + ++++ K + L+
Sbjct: 676 KLLFWSDQGTG----RIGSTTIPGFETYIFRTG-LQEPVSLTVLSDYVFWTQYKSNK-LY 729
Query: 340 WTDWGENPRIER 351
WT+ + ++
Sbjct: 730 WTNKSNTQQYQK 741
>gi|296379|emb|CAA79581.1| low density lipoprotein receptor [Mus musculus]
Length = 864
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 152/301 (50%), Gaps = 46/301 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L KVCD DC + +DE C EC G CS+ C +G+ C CP G L
Sbjct: 289 ECISLDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHICKDLKIGSECLCPSGFRLV 348
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC++P CSQ+C N +GSY C C G+ ++ CKA+ S +L+ +N
Sbjct: 349 -DLHRCEDIDECQEPDTCSQLCVNLEGSYKCECQAGFHMDPHTRVCKAVG-SIGYLLFTN 406
Query: 123 RHSI-----------------------------------------LVADLEEKGKDHRAQ 141
RH + + + L ++ +
Sbjct: 407 RHEVRKMTLDRSEYTSLLPNLKNVVALDTEVTNNRIYWSDLSQKKIYSALMDQAPNLSYD 466
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
I+ L +GLA DWI +IYW DS + V D G R L ++ ++PR +++DP
Sbjct: 467 TIISEDLHAPDGLAVDWIHRNIYWTDSVPGSVSVADTKGVKRRTLFQEAGSRPRAIVVDP 526
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL
Sbjct: 527 VHG--FMYWTDWGTPAKIKKGGLNGVDIHSLVTENIQWPNGITLDLSSGRLYWVDSKLHS 584
Query: 262 I 262
I
Sbjct: 585 I 585
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 174/429 (40%), Gaps = 105/429 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC--KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ ++ CD + DC + +DE ++ +C +KF C GE +S
Sbjct: 249 CIHGSRQCDREHDCKDMSDELGCVNVTQCDGPNKF----------------KCHSGECIS 292
Query: 63 NDSVT-----CQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH 106
D V CQD NEC + G CS +C + K C C G+ L D H
Sbjct: 293 LDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHICKDLKIGSECLCPSGFRL-VDLH 351
Query: 107 TCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
C+ I+ + S L +LE K + G D
Sbjct: 352 RCEDIDECQE----PDTCSQLCVNLEGSYK-----------CECQAGFHMD--------- 387
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI-GMD 225
VC G+ +L N + R M LD S T L P ++ + +D
Sbjct: 388 ----PHTRVCKAVGSIGYLLFT-NRHEVRKMTLDRSEYTSLL--------PNLKNVVALD 434
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFA------DSKLDFIDCKSLEIKTNVNYSTIF 279
+ + + +IYW D++ +++Y A + D I + L + I
Sbjct: 435 ----TEVTNNRIYWS-----DLSQKKIYSALMDQAPNLSYDTIISEDLHAPDGLAVDWIH 485
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILV--SGQLYEALALDLENGMLYYSTLKCTRW 337
R +YW D VP + A+ G L +G A+ +D +G +Y
Sbjct: 486 RNIYWTD----SVPGSVSVADTKGVKRRTLFQEAGSRPRAIVVDPVHGFMY--------- 532
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
WTDWG +I++ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL I +
Sbjct: 533 --WTDWGTPAKIKKGGLNGVDIHSLVTENIQWPNGITLDLSSGRLYWVDSKLHSISSIDV 590
Query: 398 DGTGRQQVI 406
+G R+ ++
Sbjct: 591 NGGNRKTIL 599
>gi|410219634|gb|JAA07036.1| low density lipoprotein receptor [Pan troglodytes]
gi|410219636|gb|JAA07037.1| low density lipoprotein receptor [Pan troglodytes]
gi|410265130|gb|JAA20531.1| low density lipoprotein receptor [Pan troglodytes]
gi|410265132|gb|JAA20532.1| low density lipoprotein receptor [Pan troglodytes]
gi|410265134|gb|JAA20533.1| low density lipoprotein receptor [Pan troglodytes]
gi|410265136|gb|JAA20534.1| low density lipoprotein receptor [Pan troglodytes]
gi|410265138|gb|JAA20535.1| low density lipoprotein receptor [Pan troglodytes]
gi|410265140|gb|JAA20536.1| low density lipoprotein receptor [Pan troglodytes]
Length = 860
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 153/302 (50%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 288 ECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLV 347
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
C+D++EC+ P CSQ+C N +G Y C C EG+ L+ CKA+ S A+L +N
Sbjct: 348 AQR-RCEDIDECQHPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG-SIAYLFFTN 405
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L ++ +
Sbjct: 406 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY 465
Query: 142 DIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D V+S + +GLA DWI +IYW DS L + V D G R L ++N ++PR +++D
Sbjct: 466 DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVD 525
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL
Sbjct: 526 PVHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 583
Query: 261 FI 262
I
Sbjct: 584 SI 585
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLD 200
+V + G+ D + G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 555 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTVLEDEKRLAHPFSLAVF 614
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 615 EDK----VFWTD 622
>gi|328705261|ref|XP_001944152.2| PREDICTED: prolow-density lipoprotein receptor-related protein
1-like [Acyrthosiphon pisum]
Length = 1768
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/336 (33%), Positives = 164/336 (48%), Gaps = 58/336 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD-----LAECKHKFGLCSNTCHPTPLGALCTCPPG 58
+C+++ VCD DC + +DEG C+ +EC + C P G +C CP G
Sbjct: 163 KCIDVRNVCDYNNDCLDASDEGGLCNNKTDFKSECNSMNCSAAFECLRKPHGIMCVCPKG 222
Query: 59 EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL 118
N+ C D+NECEQ G C Q+C N +GSY CSC+ Y L DNH CK + L
Sbjct: 223 MHYLNNK--CSDINECEQYGICDQVCLNLEGSYTCSCDPHYEL-VDNHKCKIKGLNPELL 279
Query: 119 IISNR----------HSI-LVADLEE--------------------------KGKDHRAQ 141
S R HS L+ DL+ + + +
Sbjct: 280 YSSLRQIKVFNLELLHSFTLIDDLQHVTGLAVDKLTLYWTLYLDGNSAIVRANKSEPKPE 339
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
IV SGL E L D I ++Y+ D+++ I VC+ +G+ VL NI +PR + + P
Sbjct: 340 IIVDSGLGSPENLVIDIITHNLYFTDAKMKHIGVCNNDGSVCTVLHNKNIDKPRAVAVSP 399
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G ++WTDWG+NP I R GMDGS ++ I+WPNG+ +D +R+Y+ D+K+ F
Sbjct: 400 LDG--LMYWTDWGKNPMIGRSGMDGSRPQPFVTQNIHWPNGVHVDYVGKRIYWVDAKMQF 457
Query: 262 IDCKSLE-------IKTNVNYS---TIFR-KLYWID 286
I+ +L+ + V++ T+F KLYW D
Sbjct: 458 IESINLDATDRRVIVTEYVDHPYSVTVFEDKLYWSD 493
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 130/298 (43%), Gaps = 52/298 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L + C+ K +C +G+DEG C L+ C H CS+TC TP G CTC G L+
Sbjct: 1217 ECIPLDQACNKKINCKDGSDEGDLCGLS-CIHMD--CSHTCQETPKGGKCTCYHGYKLAQ 1273
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSC-NEGYVLEYDNHTCKAINHSAAFLIISN 122
D +TC+D+NECE C+Q CTN+ GSY CSC N Y+L D +CKAI + L+ S+
Sbjct: 1274 DGITCRDINECEDDNLCTQYCTNSDGSYSCSCLNSDYILRADKSSCKAIGPTMD-LVYSS 1332
Query: 123 RHSI--LVADLEEKGKDHRAQDIVVSGL--DLVEGLAY---------------------- 156
I D++E + +S L D+ L Y
Sbjct: 1333 VDEIRSTSGDIKESKLIFSMPGMTISSLDIDIRRNLIYWTSKQAGVLICMDMQQQHKFYM 1392
Query: 157 -----------DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI-TQPRGMMLDPSPG 204
DW+ ++Y++ + I VC N + NI T +DP G
Sbjct: 1393 TDLLHPTLVRIDWLTENVYFVQN-FKDIVVCYLNAKRCATIYSANIHTTIMAFEIDPRSG 1451
Query: 205 TRWLFWTD--WG--ENPR--IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+FW++ W P I + G N TII + + L +D VY+ D
Sbjct: 1452 V--MFWSETIWAVFSTPTTIIRKSDCSGYNVKTIIHQGLQYVTDLAIDPIKHMVYWVD 1507
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY 79
C+ G CS+ C + G +C CPPG +LSN+S+ C + EC+ Y
Sbjct: 859 CQQNNGGCSHICLLSEKGKVCGCPPGLVLSNNSLNCTSLGECKSDEY 905
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 7/130 (5%)
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGM 197
+ D+ V + + L +D G ++YW D ++V T+ + + P +
Sbjct: 652 KLSDLDVPEISSIYSLEFDNHGNNLYWCDRTRKTLDVLSLSTKTHTTIFKEIEGHIPFAV 711
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG----LTLDIATRRVY 253
L P ++ + G + I+RI MDGS +S ++ Y G L D+ TR +Y
Sbjct: 712 TLVPDKSFMFVAMKE-GSHIHIDRIDMDGSIQS-LVHMVEYGLTGDEIALHFDMITRLLY 769
Query: 254 FADSKLDFID 263
F D K ID
Sbjct: 770 FTDYKNGIID 779
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 121/313 (38%), Gaps = 81/313 (25%)
Query: 72 NECEQPGYCSQMC-------TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
N CEQ G CS +C N+KG Y C+C + L D C I LI+
Sbjct: 538 NPCEQ-GKCSDICLLAPKTEINSKG-YSCACPDDKKLSEDGIFCITIAIPPT-LIVGTPT 594
Query: 125 SILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
SI+ + E G+ + + + + + L Y+ + G I DSR
Sbjct: 595 SIIEIEQEHLGRQKAKKISLKNDISSISALTYNSLSGDIIIYDSR--------------- 639
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
++ LF D+ +++ +D S+I S L
Sbjct: 640 --------------------SKKLFTFDF---VKMKLSDLDVPEISSIYS--------LE 668
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKL---------------YWIDEGG 289
D +Y+ D +D SL KT ++TIF+++ +
Sbjct: 669 FDNHGNNLYWCDRTRKTLDVLSLSTKT---HTTIFKEIEGHIPFAVTLVPDKSFMFVAMK 725
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
G + I + +MDGS S++ + E L + L++ + TR L++TD+ +N I
Sbjct: 726 EGSHIHIDRIDMDGSIQSLV---HMVE-YGLTGDEIALHFDMI--TRLLYFTDY-KNGII 778
Query: 350 ERIGMDGSNRSTI 362
+ + DG++R I
Sbjct: 779 DSVSEDGTDRRII 791
>gi|74213055|dbj|BAE41671.1| unnamed protein product [Mus musculus]
Length = 810
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 152/301 (50%), Gaps = 46/301 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L KVCD DC + +DE C EC G CS+ C +G+ C CP G L
Sbjct: 289 ECISLDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHICKDLKIGSECLCPSGFRLV 348
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC++P CSQ+C N +GSY C C G+ ++ CKA+ S +L+ +N
Sbjct: 349 -DLHRCEDIDECQEPDTCSQLCVNLEGSYKCECQAGFHMDPHTRVCKAVG-SIGYLLFTN 406
Query: 123 RHSI-----------------------------------------LVADLEEKGKDHRAQ 141
RH + + + L ++ +
Sbjct: 407 RHEVRKMTLDRSEYTSLLPNLKNVVALDTEVTNNRIYWSDLSQKKIYSALMDQAPNLSYD 466
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
I+ L +GLA DWI +IYW DS + V D G R L ++ ++PR +++DP
Sbjct: 467 TIISEDLHAPDGLAVDWIHRNIYWTDSVPGSVSVADTKGVKRRTLFQEAGSRPRAIVVDP 526
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL
Sbjct: 527 VHG--FMYWTDWGTPAKIKKGGLNGVDIHSLVTENIQWPNGITLDLSSGRLYWVDSKLHS 584
Query: 262 I 262
I
Sbjct: 585 I 585
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 173/429 (40%), Gaps = 105/429 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC--KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ ++ CD + DC + +DE ++ +C +KF C GE +S
Sbjct: 249 CIHGSRQCDREHDCKDMSDELGCVNVTQCDGPNKF----------------KCHSGECIS 292
Query: 63 NDSVT-----CQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH 106
D V CQD NEC + G CS +C + K C C G+ L D H
Sbjct: 293 LDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHICKDLKIGSECLCPSGFRL-VDLH 351
Query: 107 TCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
C+ I+ S L +LE K + G D
Sbjct: 352 RCEDIDECQEPDTCSQ----LCVNLEGSYK-----------CECQAGFHMD--------- 387
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI-GMD 225
VC G+ +L N + R M LD S T L P ++ + +D
Sbjct: 388 ----PHTRVCKAVGSIGYLLFT-NRHEVRKMTLDRSEYTSLL--------PNLKNVVALD 434
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFA------DSKLDFIDCKSLEIKTNVNYSTIF 279
+ + + +IYW D++ +++Y A + D I + L + I
Sbjct: 435 ----TEVTNNRIYWS-----DLSQKKIYSALMDQAPNLSYDTIISEDLHAPDGLAVDWIH 485
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILV--SGQLYEALALDLENGMLYYSTLKCTRW 337
R +YW D VP + A+ G L +G A+ +D +G +Y
Sbjct: 486 RNIYWTD----SVPGSVSVADTKGVKRRTLFQEAGSRPRAIVVDPVHGFMY--------- 532
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
WTDWG +I++ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL I +
Sbjct: 533 --WTDWGTPAKIKKGGLNGVDIHSLVTENIQWPNGITLDLSSGRLYWVDSKLHSISSIDV 590
Query: 398 DGTGRQQVI 406
+G R+ ++
Sbjct: 591 NGGNRKTIL 599
>gi|144225271|emb|CAM84315.1| very low-density lipoprotein receptor precursor [Solea
senegalensis]
Length = 848
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 149/301 (49%), Gaps = 46/301 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + KVC+ DCP+ +DE C++ EC G CS+ C +G +C C PG L
Sbjct: 330 ECIEMNKVCNKVRDCPDWSDEPINECNVNECLLNNGGCSHICKDMVIGFVCDCTPGLQLI 389
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D+NEC PG CSQ+C N KG Y C C+ GY ++ CKA+ LI +N
Sbjct: 390 -DHKTCGDINECLNPGICSQICINLKGGYKCECHNGYQMDPTTGVCKAVGKEPC-LIFTN 447
Query: 123 RHSI----------------------LVADLEE-------------------KGKDHRAQ 141
R I L AD ++ K D A
Sbjct: 448 RRDIRRLGLERKEYTQIVEQQRNAVALDADFDQQMIFWADLTQRTIYSTVLDKRGDVGAH 507
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
V+ + G+A DWI ++YW D I V + NGT + VL + +P + +DP
Sbjct: 508 KKVMDNIQTPVGVAVDWIYKNLYWSDLGTKTISVTNFNGTKQKVLFNRGLKEPASIAVDP 567
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++W+DWGE +IE+ GM+G +R +++T I WPNG+TLD+ R+Y+ DSKL
Sbjct: 568 LSG--FVYWSDWGEPAKIEKAGMNGVDRQVLVATDIQWPNGITLDLIKGRLYWVDSKLHM 625
Query: 262 I 262
+
Sbjct: 626 L 626
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 103/210 (49%), Gaps = 42/210 (20%)
Query: 219 IERIGMDGSNRSTIISTK--------------IYWPNGLTLDIATRRVYFA--DSKLDFI 262
I R+G++ + I+ + I+W D+ R +Y D + D
Sbjct: 451 IRRLGLERKEYTQIVEQQRNAVALDADFDQQMIFW-----ADLTQRTIYSTVLDKRGDVG 505
Query: 263 DCKSL--EIKTNVNYST--IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE-- 316
K + I+T V + I++ LYW D G + + N +G+ +L + L E
Sbjct: 506 AHKKVMDNIQTPVGVAVDWIYKNLYWSDLGTKTISV----TNFNGTKQKVLFNRGLKEPA 561
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 376
++A+D +G +Y W+DWGE +IE+ GM+G +R +++T I WPNG+TLD
Sbjct: 562 SIAVDPLSGFVY-----------WSDWGEPAKIEKAGMNGVDRQVLVATDIQWPNGITLD 610
Query: 377 IATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ R+Y+ DSKL + + +G R++V+
Sbjct: 611 LIKGRLYWVDSKLHMLCSVDLNGDNRKKVL 640
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLAKDNITQPRGMM 198
Q +V + + G+ D I G +YW+DS+L+ + D NG NR ++ + D + P +
Sbjct: 594 QVLVATDIQWPNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRKKVLQSSDYLAHPFALT 653
Query: 199 LDPSPGTRWLFWTDWGENPRI 219
+ +FWTD GE I
Sbjct: 654 V----FEDRVFWTD-GETKAI 669
>gi|74213483|dbj|BAE35554.1| unnamed protein product [Mus musculus]
Length = 862
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 152/301 (50%), Gaps = 46/301 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L KVCD DC + +DE C EC G CS+ C +G+ C CP G L
Sbjct: 289 ECISLDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHICKDLKIGSECLCPSGFRLV 348
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC++P CSQ+C N +GSY C C G+ ++ CKA+ S +L+ +N
Sbjct: 349 -DLHRCEDIDECQEPDTCSQLCVNLEGSYKCECQAGFHMDPHTRVCKAVG-SIGYLLFTN 406
Query: 123 RHSI-----------------------------------------LVADLEEKGKDHRAQ 141
RH + + + L ++ +
Sbjct: 407 RHEVRKMTLDRSEYTSLLPNLKNVVALDTEVTNNRIYWSDLSQKKIYSALMDQAPNLSYD 466
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
I+ L +GLA DWI +IYW DS + V D G R L ++ ++PR +++DP
Sbjct: 467 TIISEDLHAPDGLAVDWIHRNIYWTDSVPGSVSVADTKGVKRRTLFQEAGSRPRAIVVDP 526
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL
Sbjct: 527 VHG--FMYWTDWGTPAKIKKGGLNGVDIHSLVTENIQWPNGITLDLSSGRLYWVDSKLHS 584
Query: 262 I 262
I
Sbjct: 585 I 585
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 174/429 (40%), Gaps = 105/429 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC--KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ ++ CD + DC + +DE ++ +C +KF C GE +S
Sbjct: 249 CIHGSRQCDREHDCKDMSDELGCVNVTQCDGPNKF----------------KCHSGECIS 292
Query: 63 NDSVT-----CQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH 106
D V CQD NEC + G CS +C + K C C G+ L D H
Sbjct: 293 LDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHICKDLKIGSECLCPSGFRL-VDLH 351
Query: 107 TCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
C+ I+ + S L +LE K + G D
Sbjct: 352 RCEDIDECQE----PDTCSQLCVNLEGSYK-----------CECQAGFHMD--------- 387
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI-GMD 225
VC G+ +L N + R M LD S T L P ++ + +D
Sbjct: 388 ----PHTRVCKAVGSIGYLLFT-NRHEVRKMTLDRSEYTSLL--------PNLKNVVALD 434
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFA------DSKLDFIDCKSLEIKTNVNYSTIF 279
+ + + +IYW D++ +++Y A + D I + L + I
Sbjct: 435 ----TEVTNNRIYWS-----DLSQKKIYSALMDQAPNLSYDTIISEDLHAPDGLAVDWIH 485
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILV--SGQLYEALALDLENGMLYYSTLKCTRW 337
R +YW D VP + A+ G L +G A+ +D +G +Y
Sbjct: 486 RNIYWTD----SVPGSVSVADTKGVKRRTLFQEAGSRPRAIVVDPVHGFMY--------- 532
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
WTDWG +I++ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL I +
Sbjct: 533 --WTDWGTPAKIKKGGLNGVDIHSLVTENIQWPNGITLDLSSGRLYWVDSKLHSISSIDV 590
Query: 398 DGTGRQQVI 406
+G R+ ++
Sbjct: 591 NGGNRKTIL 599
>gi|74212404|dbj|BAE30950.1| unnamed protein product [Mus musculus]
Length = 862
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 152/301 (50%), Gaps = 46/301 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L KVCD DC + +DE C EC G CS+ C +G+ C CP G L
Sbjct: 289 ECISLDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHICKDLKIGSECLCPSGFRLV 348
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC++P CSQ+C N +GSY C C G+ ++ CKA+ S +L+ +N
Sbjct: 349 -DLHRCEDIDECQEPDTCSQLCVNLEGSYKCECQAGFHMDPHTRVCKAVG-SIGYLLFTN 406
Query: 123 RHSI-----------------------------------------LVADLEEKGKDHRAQ 141
RH + + + L ++ +
Sbjct: 407 RHEVRKMTLDRSEYTSLLPNLKNVVALDTEVTNNRIYWSDLSQKKIYSALMDQAPNLSYD 466
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
I+ L +GLA DWI +IYW DS + V D G R L ++ ++PR +++DP
Sbjct: 467 TIISEDLHAPDGLAVDWIHRNIYWTDSVPGSVSVADTKGVKRRTLFQEAGSRPRAIVVDP 526
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL
Sbjct: 527 VHG--FMYWTDWGTPAKIKKGGLNGVDIHSLVTENIQWPNGITLDLSSGRLYWVDSKLHS 584
Query: 262 I 262
I
Sbjct: 585 I 585
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 174/429 (40%), Gaps = 105/429 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC--KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ ++ CD + DC + +DE ++ +C +KF C GE +S
Sbjct: 249 CIHGSRQCDREHDCKDMSDELGCVNVTQCDGPNKF----------------KCHSGECIS 292
Query: 63 NDSVT-----CQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH 106
D V CQD NEC + G CS +C + K C C G+ L D H
Sbjct: 293 LDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHICKDLKIGSECLCPSGFRL-VDLH 351
Query: 107 TCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
C+ I+ + S L +LE K + G D
Sbjct: 352 RCEDIDECQE----PDTCSQLCVNLEGSYK-----------CECQAGFHMD--------- 387
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI-GMD 225
VC G+ +L N + R M LD S T L P ++ + +D
Sbjct: 388 ----PHTRVCKAVGSIGYLLFT-NRHEVRKMTLDRSEYTSLL--------PNLKNVVALD 434
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFA------DSKLDFIDCKSLEIKTNVNYSTIF 279
+ + + +IYW D++ +++Y A + D I + L + I
Sbjct: 435 ----TEVTNNRIYWS-----DLSQKKIYSALMDQAPNLSYDTIISEDLHAPDGLAVDWIH 485
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILV--SGQLYEALALDLENGMLYYSTLKCTRW 337
R +YW D VP + A+ G L +G A+ +D +G +Y
Sbjct: 486 RNIYWTD----SVPGSVSVADTKGVKRRTLFQEAGSRPRAIVVDPVHGFMY--------- 532
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
WTDWG +I++ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL I +
Sbjct: 533 --WTDWGTPAKIKKGGLNGVDIHSLVTENIQWPNGITLDLSSGRLYWVDSKLHSISSIDV 590
Query: 398 DGTGRQQVI 406
+G R+ ++
Sbjct: 591 NGGNRKTIL 599
>gi|144225270|emb|CAI52471.2| very low-density lipoprotein receptor precursor [Solea
senegalensis]
Length = 868
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 149/301 (49%), Gaps = 46/301 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + KVC+ DCP+ +DE C++ EC G CS+ C +G +C C PG L
Sbjct: 330 ECIEMNKVCNKVRDCPDWSDEPINECNVNECLLNNGGCSHICKDMVIGFVCDCTPGLQLI 389
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D+NEC PG CSQ+C N KG Y C C+ GY ++ CKA+ LI +N
Sbjct: 390 -DHKTCGDINECLNPGICSQICINLKGGYKCECHNGYQMDPTTGVCKAVGKEPC-LIFTN 447
Query: 123 RHSI----------------------LVADLEE-------------------KGKDHRAQ 141
R I L AD ++ K D A
Sbjct: 448 RRDIRRLGLERKEYTQIVEQQRNAVALDADFDQQMIFWADLTQRTIYSTVLDKRGDVGAH 507
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
V+ + G+A DWI ++YW D I V + NGT + VL + +P + +DP
Sbjct: 508 KKVMDNIQTPVGVAVDWIYKNLYWSDLGTKTISVTNFNGTKQKVLFNRGLKEPASIAVDP 567
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++W+DWGE +IE+ GM+G +R +++T I WPNG+TLD+ R+Y+ DSKL
Sbjct: 568 LSG--FVYWSDWGEPAKIEKAGMNGVDRQVLVATDIQWPNGITLDLIKGRLYWVDSKLHM 625
Query: 262 I 262
+
Sbjct: 626 L 626
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 103/210 (49%), Gaps = 42/210 (20%)
Query: 219 IERIGMDGSNRSTIISTK--------------IYWPNGLTLDIATRRVYFA--DSKLDFI 262
I R+G++ + I+ + I+W D+ R +Y D + D
Sbjct: 451 IRRLGLERKEYTQIVEQQRNAVALDADFDQQMIFW-----ADLTQRTIYSTVLDKRGDVG 505
Query: 263 DCKSL--EIKTNVNYST--IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE-- 316
K + I+T V + I++ LYW D G + + N +G+ +L + L E
Sbjct: 506 AHKKVMDNIQTPVGVAVDWIYKNLYWSDLGTKTISV----TNFNGTKQKVLFNRGLKEPA 561
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 376
++A+D +G +Y W+DWGE +IE+ GM+G +R +++T I WPNG+TLD
Sbjct: 562 SIAVDPLSGFVY-----------WSDWGEPAKIEKAGMNGVDRQVLVATDIQWPNGITLD 610
Query: 377 IATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ R+Y+ DSKL + + +G R++V+
Sbjct: 611 LIKGRLYWVDSKLHMLCSVDLNGDNRKKVL 640
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLAKDNITQPRGMM 198
Q +V + + G+ D I G +YW+DS+L+ + D NG NR ++ + D + P +
Sbjct: 594 QVLVATDIQWPNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRKKVLQSSDYLAHPFALT 653
Query: 199 LDPSPGTRWLFWTDWGENPRI 219
+ +FWTD GE I
Sbjct: 654 V----FEDRVFWTD-GETKAI 669
>gi|17512511|gb|AAH19207.1| Low density lipoprotein receptor [Mus musculus]
Length = 862
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 152/301 (50%), Gaps = 46/301 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L KVCD DC + +DE C EC G CS+ C +G+ C CP G L
Sbjct: 289 ECISLDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHICKDLKIGSECLCPSGFRLV 348
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC++P CSQ+C N +GSY C C G+ ++ CKA+ S +L+ +N
Sbjct: 349 -DLHRCEDIDECQEPDTCSQLCVNLEGSYKCECQAGFHMDPHTRVCKAVG-SIGYLLFTN 406
Query: 123 RHSI-----------------------------------------LVADLEEKGKDHRAQ 141
RH + + + L ++ +
Sbjct: 407 RHEVRKMTLDRSEYTSLLPNLKNVVALDTEVTNNRIYWSDLSQKKIYSALMDQAPNLSYD 466
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
I+ L +GLA DWI +IYW DS + V D G R L ++ ++PR +++DP
Sbjct: 467 TIISEDLHAPDGLAVDWIHRNIYWTDSVPGSVSVADTKGVKRRTLFQEAGSRPRAIVVDP 526
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL
Sbjct: 527 VHG--FMYWTDWGTPAKIKKGGLNGVDIHSLVTENIQWPNGITLDLSSGRLYWVDSKLHS 584
Query: 262 I 262
I
Sbjct: 585 I 585
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 174/429 (40%), Gaps = 105/429 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC--KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ ++ CD + DC + +DE ++ +C +KF C GE +S
Sbjct: 249 CIHGSRQCDREHDCKDMSDELGCVNVTQCDGPNKF----------------KCHSGECIS 292
Query: 63 NDSVT-----CQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH 106
D V CQD NEC + G CS +C + K C C G+ L D H
Sbjct: 293 LDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHICKDLKIGSECLCPSGFRL-VDLH 351
Query: 107 TCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
C+ I+ + S L +LE K + G D
Sbjct: 352 RCEDIDECQE----PDTCSQLCVNLEGSYK-----------CECQAGFHMD--------- 387
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI-GMD 225
VC G+ +L N + R M LD S T L P ++ + +D
Sbjct: 388 ----PHTRVCKAVGSIGYLLFT-NRHEVRKMTLDRSEYTSLL--------PNLKNVVALD 434
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFA------DSKLDFIDCKSLEIKTNVNYSTIF 279
+ + + +IYW D++ +++Y A + D I + L + I
Sbjct: 435 ----TEVTNNRIYWS-----DLSQKKIYSALMDQAPNLSYDTIISEDLHAPDGLAVDWIH 485
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILV--SGQLYEALALDLENGMLYYSTLKCTRW 337
R +YW D VP + A+ G L +G A+ +D +G +Y
Sbjct: 486 RNIYWTD----SVPGSVSVADTKGVKRRTLFQEAGSRPRAIVVDPVHGFMY--------- 532
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
WTDWG +I++ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL I +
Sbjct: 533 --WTDWGTPAKIKKGGLNGVDIHSLVTENIQWPNGITLDLSSGRLYWVDSKLHSISSIDV 590
Query: 398 DGTGRQQVI 406
+G R+ ++
Sbjct: 591 NGGNRKTIL 599
>gi|113195700|ref|NP_034830.2| low-density lipoprotein receptor isoform 1 precursor [Mus musculus]
gi|449081274|sp|P35951.2|LDLR_MOUSE RecName: Full=Low-density lipoprotein receptor; Short=LDL receptor;
Flags: Precursor
gi|296202|emb|CAA45759.1| low density lipoprotein receptor precursor [Mus musculus]
gi|31419350|gb|AAH53041.1| Low density lipoprotein receptor [Mus musculus]
gi|148693265|gb|EDL25212.1| low density lipoprotein receptor, isoform CRA_b [Mus musculus]
Length = 862
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 152/301 (50%), Gaps = 46/301 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L KVCD DC + +DE C EC G CS+ C +G+ C CP G L
Sbjct: 289 ECISLDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHICKDLKIGSECLCPSGFRLV 348
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC++P CSQ+C N +GSY C C G+ ++ CKA+ S +L+ +N
Sbjct: 349 -DLHRCEDIDECQEPDTCSQLCVNLEGSYKCECQAGFHMDPHTRVCKAVG-SIGYLLFTN 406
Query: 123 RHSI-----------------------------------------LVADLEEKGKDHRAQ 141
RH + + + L ++ +
Sbjct: 407 RHEVRKMTLDRSEYTSLLPNLKNVVALDTEVTNNRIYWSDLSQKKIYSALMDQAPNLSYD 466
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
I+ L +GLA DWI +IYW DS + V D G R L ++ ++PR +++DP
Sbjct: 467 TIISEDLHAPDGLAVDWIHRNIYWTDSVPGSVSVADTKGVKRRTLFQEAGSRPRAIVVDP 526
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL
Sbjct: 527 VHG--FMYWTDWGTPAKIKKGGLNGVDIHSLVTENIQWPNGITLDLSSGRLYWVDSKLHS 584
Query: 262 I 262
I
Sbjct: 585 I 585
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 174/429 (40%), Gaps = 105/429 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC--KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ ++ CD + DC + +DE ++ +C +KF C GE +S
Sbjct: 249 CIHGSRQCDREHDCKDMSDELGCVNVTQCDGPNKF----------------KCHSGECIS 292
Query: 63 NDSVT-----CQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH 106
D V CQD NEC + G CS +C + K C C G+ L D H
Sbjct: 293 LDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHICKDLKIGSECLCPSGFRL-VDLH 351
Query: 107 TCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
C+ I+ + S L +LE K + G D
Sbjct: 352 RCEDIDECQE----PDTCSQLCVNLEGSYK-----------CECQAGFHMD--------- 387
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI-GMD 225
VC G+ +L N + R M LD S T L P ++ + +D
Sbjct: 388 ----PHTRVCKAVGSIGYLLFT-NRHEVRKMTLDRSEYTSLL--------PNLKNVVALD 434
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFA------DSKLDFIDCKSLEIKTNVNYSTIF 279
+ + + +IYW D++ +++Y A + D I + L + I
Sbjct: 435 ----TEVTNNRIYWS-----DLSQKKIYSALMDQAPNLSYDTIISEDLHAPDGLAVDWIH 485
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILV--SGQLYEALALDLENGMLYYSTLKCTRW 337
R +YW D VP + A+ G L +G A+ +D +G +Y
Sbjct: 486 RNIYWTD----SVPGSVSVADTKGVKRRTLFQEAGSRPRAIVVDPVHGFMY--------- 532
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
WTDWG +I++ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL I +
Sbjct: 533 --WTDWGTPAKIKKGGLNGVDIHSLVTENIQWPNGITLDLSSGRLYWVDSKLHSISSIDV 590
Query: 398 DGTGRQQVI 406
+G R+ ++
Sbjct: 591 NGGNRKTIL 599
>gi|432095897|gb|ELK26817.1| Very low-density lipoprotein receptor [Myotis davidii]
Length = 899
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 168/334 (50%), Gaps = 33/334 (9%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C+++ KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 346 ECIDIIKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICRDLVIGYECDCAAGFELI 405
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI----NHSAAF 117
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ ++ A
Sbjct: 406 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVVEQLRNTVAL 463
Query: 118 LIISNRHSILVADLEEKGK-DHRAQDIVVSGLDLVE------GLAYDWIGGHIYWLDSRL 170
+ ADL +K D V + +++ +A DW+ +YW D+
Sbjct: 464 DADIAAQKLFWADLSQKAIFSASLDDKVGRHVKMIDNVYNPAAIAVDWVYKSLYWTDAAS 523
Query: 171 NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS 230
I V +GT R +L ++ +P + +DP G +++W+DWGE +IE+ GM+G +R
Sbjct: 524 KTISVATLDGTKRKLLFNSDLREPASIAVDPLSG--FVYWSDWGEPAKIEKAGMNGFDRR 581
Query: 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC------------KSLEIKTNVNYSTI 278
+++ I WPNG+TLD+ R+Y+ DSKL + KSLE + TI
Sbjct: 582 PLVAVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTI 641
Query: 279 FR-KLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
F ++YWID V G GS + LV+
Sbjct: 642 FEDRVYWIDGENEAV---YGANKFTGSELATLVN 672
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 31/181 (17%)
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI--------------FRKLYWIDE 287
L DIA +++++AD I SL+ K + I ++ LYW D
Sbjct: 462 ALDADIAAQKLFWADLSQKAIFSASLDDKVGRHVKMIDNVYNPAAIAVDWVYKSLYWTDA 521
Query: 288 GGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGE 345
+ + A +DG+ +L + L E ++A+D +G +Y W+DWGE
Sbjct: 522 ASKTISV----ATLDGTKRKLLFNSDLREPASIAVDPLSGFVY-----------WSDWGE 566
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V
Sbjct: 567 PAKIEKAGMNGFDRRPLVAVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIV 626
Query: 406 I 406
+
Sbjct: 627 L 627
>gi|358030304|ref|NP_001239588.1| low-density lipoprotein receptor isoform 3 presursor precursor [Mus
musculus]
Length = 861
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 152/301 (50%), Gaps = 46/301 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L KVCD DC + +DE C EC G CS+ C +G+ C CP G L
Sbjct: 288 ECISLDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHICKDLKIGSECLCPSGFRLV 347
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC++P CSQ+C N +GSY C C G+ ++ CKA+ S +L+ +N
Sbjct: 348 -DLHRCEDIDECQEPDTCSQLCVNLEGSYKCECQAGFHMDPHTRVCKAVG-SIGYLLFTN 405
Query: 123 RHSI-----------------------------------------LVADLEEKGKDHRAQ 141
RH + + + L ++ +
Sbjct: 406 RHEVRKMTLDRSEYTSLLPNLKNVVALDTEVTNNRIYWSDLSQKKIYSALMDQAPNLSYD 465
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
I+ L +GLA DWI +IYW DS + V D G R L ++ ++PR +++DP
Sbjct: 466 TIISEDLHAPDGLAVDWIHRNIYWTDSVPGSVSVADTKGVKRRTLFQEAGSRPRAIVVDP 525
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL
Sbjct: 526 VHG--FMYWTDWGTPAKIKKGGLNGVDIHSLVTENIQWPNGITLDLSSGRLYWVDSKLHS 583
Query: 262 I 262
I
Sbjct: 584 I 584
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 174/429 (40%), Gaps = 105/429 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC--KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ ++ CD + DC + +DE ++ +C +KF C GE +S
Sbjct: 248 CIHGSRQCDREHDCKDMSDELGCVNVTQCDGPNKF----------------KCHSGECIS 291
Query: 63 NDSVT-----CQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH 106
D V CQD NEC + G CS +C + K C C G+ L D H
Sbjct: 292 LDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHICKDLKIGSECLCPSGFRL-VDLH 350
Query: 107 TCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
C+ I+ + S L +LE K + G D
Sbjct: 351 RCEDIDECQE----PDTCSQLCVNLEGSYK-----------CECQAGFHMD--------- 386
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI-GMD 225
VC G+ +L N + R M LD S T L P ++ + +D
Sbjct: 387 ----PHTRVCKAVGSIGYLLFT-NRHEVRKMTLDRSEYTSLL--------PNLKNVVALD 433
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFA------DSKLDFIDCKSLEIKTNVNYSTIF 279
+ + + +IYW D++ +++Y A + D I + L + I
Sbjct: 434 ----TEVTNNRIYWS-----DLSQKKIYSALMDQAPNLSYDTIISEDLHAPDGLAVDWIH 484
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILV--SGQLYEALALDLENGMLYYSTLKCTRW 337
R +YW D VP + A+ G L +G A+ +D +G +Y
Sbjct: 485 RNIYWTD----SVPGSVSVADTKGVKRRTLFQEAGSRPRAIVVDPVHGFMY--------- 531
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
WTDWG +I++ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL I +
Sbjct: 532 --WTDWGTPAKIKKGGLNGVDIHSLVTENIQWPNGITLDLSSGRLYWVDSKLHSISSIDV 589
Query: 398 DGTGRQQVI 406
+G R+ ++
Sbjct: 590 NGGNRKTIL 598
>gi|340728803|ref|XP_003402703.1| PREDICTED: vitellogenin receptor-like isoform 1 [Bombus terrestris]
Length = 1759
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 170/357 (47%), Gaps = 54/357 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC++L C+ K +C + +DE C A+ K C + C TP GA C+C PG L
Sbjct: 177 RCISLNATCNEKDNCGDNSDEDIDACIKADASCKEARCQHNCRKTPEGAQCSCRPGYKLV 236
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA------------ 110
N+ +C+D+NEC G C Q C N+ GSY CSC GY L D TC+A
Sbjct: 237 NNQTSCEDVNECGNYGICDQECINSVGSYTCSCQPGYSLNDDKRTCQAEGGEGLMMFSIK 296
Query: 111 -------INHSAAFLIISN-RHSILV---------ADLEEKGK--------DHRAQDIVV 145
+N + + N +H++ + +D+E+ + + + IV
Sbjct: 297 SEIRGIYLNSRLYYPVTQNLQHAVAISLDANNVYWSDIEDGNEAIIKSLEDGSQREVIVT 356
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL + +A DW+ G+IY+ D I VC+ +G+ V+ K+ +PRG++L PS G
Sbjct: 357 AGLSSPDDMAVDWVTGNIYFTDGGYMHIGVCNNDGSYCTVIIKEQNDKPRGLVLLPSSG- 415
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
++W+ WG + I R GMDG N + ++S + PN L++D A R+Y+ D+K I+
Sbjct: 416 -LMYWSKWGMDSCILRAGMDGKNNTVLVSKDLELPNSLSIDYANERLYWIDAKAKVIESV 474
Query: 266 SLE-----------IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
L+ K + + KLYW D N + G N +LVS
Sbjct: 475 RLDGTDRKAILKDIAKRPFSLAVFENKLYWSDWISNTIQ---SCDKFTGKNWEVLVS 528
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 181/416 (43%), Gaps = 90/416 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ VCDGK DC + +DE C A C K+ C+N CH TP+G +C C G LSND
Sbjct: 1208 CLPFANVCDGKVDCSDRSDEFGQCATA-CT-KYNPCTNMCHKTPIGPVCGCRNGYQLSND 1265
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS--- 121
+C+D++EC+ CSQ+C NT GS+ CSC+E YV+ D +CK + +S
Sbjct: 1266 FKSCEDIDECKD-NVCSQICYNTNGSFTCSCHEEYVIRSDKISCKVAGSQMEIITVSSAD 1324
Query: 122 ------NRHSILVA----DLEEKGKDHRAQD-----------------------IVVSGL 148
N +SI V + E G D ++ V+GL
Sbjct: 1325 IRKLSPNLNSIQVVYEELNHEISGIDANTRENTIYWSNDNLGMVSKINIKTKERKTVTGL 1384
Query: 149 DLVEGLAYDWIGGHIYWLDSR-LNRIEVC--DENGTNRIVLAKDNITQPRGMMLDPSPGT 205
E LA DWI ++Y+ D+ + I+VC ++ ++V + R + + P
Sbjct: 1385 GRPEALAVDWITDNVYFNDNDYFSSIQVCNLEQQKCAKVVPIP---LKNRAVSIAIEPKE 1441
Query: 206 RWLFW--TDWGENPR----IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
WLFW T W R I R G+N + I+ + LT+D R+Y++D+
Sbjct: 1442 GWLFWSQTSWASYDRPMTEIYRSNTMGTNITAIVHRDLGIVLALTIDYTRSRLYWSDT-- 1499
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
F K I +N+DGSN I+++ +++AL+
Sbjct: 1500 -------------------FHK-------------NIESSNLDGSNRIIVLNTDVHQALS 1527
Query: 320 LDLENGMLYY---STLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
+ + LY+ +T K + + D ++ IG+ + IIS I P G
Sbjct: 1528 ISIYEDSLYWLMSTTGKVKKCKLYGD--KSCVTITIGISNIEKYFIISHPIRQPIG 1581
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 62/312 (19%), Positives = 116/312 (37%), Gaps = 75/312 (24%)
Query: 80 CSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI-LVADLEEKGK- 136
CSQ+C N+ SY C+C L DNHTC+A+ +I + I +L K K
Sbjct: 556 CSQLCLLNSANSYTCACTLDKELNSDNHTCRAVKKKTHLIIAAGSTFIDYYHELLGKPKI 615
Query: 137 ---------DHRAQDIVVSGL----------------------------DLVEGLAYDWI 159
A + + GL +++ G+ +D+I
Sbjct: 616 TTSDTLNHVTEVAYNPLTGGLLASDQLRDNIFHFNMQTGEEKSMMSIENEILGGMDFDYI 675
Query: 160 GGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRI 219
G ++Y D + IEV N + + + +P + L P + + E RI
Sbjct: 676 GNNLYLSDVKHKTIEVHSLNNNEKTIFYFQD--EPYDIALVPEESIMMVVFRT-NELYRI 732
Query: 220 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIF 279
+ + M+G G + I + + K+ Y +
Sbjct: 733 DLMNMNGV--------------GPRVTIEGNKTHLIGPKISLC------------YDRVL 766
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLF 339
+ L+W D+G +IG + G I +G L E ++L + + ++++ K + L+
Sbjct: 767 KLLFWSDQGTG----RIGSTTIPGFETYIFRTG-LQEPVSLTVLSDYVFWTQYKSNK-LY 820
Query: 340 WTDWGENPRIER 351
WT+ + ++
Sbjct: 821 WTNKSNTQQYQK 832
>gi|16506799|gb|AAL23955.1|AF425607_1 low density lipoprotein receptor [Mus musculus]
Length = 862
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 152/301 (50%), Gaps = 46/301 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L KVCD DC + +DE C EC G CS+ C +G+ C CP G L
Sbjct: 289 ECISLDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHICKDLKIGSECLCPSGFRLV 348
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC++P CSQ+C N +GSY C C G+ ++ CKA+ S +L+ +N
Sbjct: 349 -DLHRCEDIDECQEPDTCSQLCVNLEGSYKCECQAGFHMDPHTRVCKAVG-SIGYLLFTN 406
Query: 123 RHSI-----------------------------------------LVADLEEKGKDHRAQ 141
RH + + + L ++ +
Sbjct: 407 RHEVRKMTLDRSEYTSLLPNLKNVVALDTEVTNNRIYWSDLSQKKIYSALMDQAPNLSYD 466
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
I+ L +GLA DWI +IYW DS + V D G R L ++ ++PR +++DP
Sbjct: 467 TIISEDLHAPDGLAVDWIHRNIYWTDSVPGSVSVADTKGVKRRTLFQEAGSRPRAIVVDP 526
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL
Sbjct: 527 VHG--FMYWTDWGTPAKIKKGGLNGVDIHSLVTENIQWPNGITLDLSSGRLYWVDSKLHS 584
Query: 262 I 262
I
Sbjct: 585 I 585
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 174/429 (40%), Gaps = 105/429 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC--KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ ++ CD + DC + +DE ++ +C +KF C GE +S
Sbjct: 249 CIHGSRQCDREHDCKDMSDELGCVNVTQCDGPNKF----------------KCHSGECIS 292
Query: 63 NDSVT-----CQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH 106
D V CQD NEC + G CS +C + K C C G+ L D H
Sbjct: 293 LDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHICKDLKIGSECLCPSGFRL-VDLH 351
Query: 107 TCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
C+ I+ + S L +LE K + G D
Sbjct: 352 RCEDIDECQE----PDTCSQLCVNLEGSYK-----------CECQAGFHMD--------- 387
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI-GMD 225
VC G+ +L N + R M LD S T L P ++ + +D
Sbjct: 388 ----PHTRVCKAVGSIGYLLFT-NRHEVRKMTLDRSEYTSLL--------PNLKNVVALD 434
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFA------DSKLDFIDCKSLEIKTNVNYSTIF 279
+ + + +IYW D++ +++Y A + D I + L + I
Sbjct: 435 ----TEVTNNRIYWS-----DLSQKKIYSALMDQAPNLSYDTIISEDLHAPDGLAVDWIH 485
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILV--SGQLYEALALDLENGMLYYSTLKCTRW 337
R +YW D VP + A+ G L +G A+ +D +G +Y
Sbjct: 486 RNIYWTD----SVPGSVSVADTKGVKRRTLFQEAGSRPRAIVVDPVHGFMY--------- 532
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
WTDWG +I++ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL I +
Sbjct: 533 --WTDWGTPAKIKKGGLNGVDIHSLVTENIQWPNGITLDLSSGRLYWVDSKLHSISSIDV 590
Query: 398 DGTGRQQVI 406
+G R+ ++
Sbjct: 591 NGGNRKTIL 599
>gi|307775412|ref|NP_001182727.1| low-density lipoprotein receptor isoform 2 precursor [Homo sapiens]
gi|168277632|dbj|BAG10794.1| low-density lipoprotein receptor precursor [synthetic construct]
Length = 858
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 153/302 (50%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 288 ECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLV 347
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
C+D++EC+ P CSQ+C N +G Y C C EG+ L+ CKA+ S A+L +N
Sbjct: 348 AQR-RCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG-SIAYLFFTN 405
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L ++ +
Sbjct: 406 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY 465
Query: 142 DIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D V+S + +GLA DWI +IYW DS L + V D G R L ++N ++PR +++D
Sbjct: 466 DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVD 525
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL
Sbjct: 526 PVHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 583
Query: 261 FI 262
I
Sbjct: 584 SI 585
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLD 200
+V + G+ D + G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 555 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF 614
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 615 EDK----VFWTD 622
>gi|6691161|gb|AAF24515.1| low density lipoprotein receptor [Homo sapiens]
Length = 837
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 153/302 (50%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 265 ECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLV 324
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
C+D++EC+ P CSQ+C N +G Y C C EG+ L+ CKA+ S A+L +N
Sbjct: 325 AQR-RCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG-SIAYLFFTN 382
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L ++ +
Sbjct: 383 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY 442
Query: 142 DIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D V+S + +GLA DWI +IYW DS L + V D G R L ++N ++PR +++D
Sbjct: 443 DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVD 502
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL
Sbjct: 503 PVHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 560
Query: 261 FI 262
I
Sbjct: 561 SI 562
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLD 200
+V + G+ D + G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 532 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF 591
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 592 EDK----VFWTD 599
>gi|62088398|dbj|BAD92646.1| low density lipoprotein receptor precursor variant [Homo sapiens]
Length = 870
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 153/302 (50%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 300 ECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLV 359
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
C+D++EC+ P CSQ+C N +G Y C C EG+ L+ CKA+ S A+L +N
Sbjct: 360 AQR-RCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG-SIAYLFFTN 417
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L ++ +
Sbjct: 418 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY 477
Query: 142 DIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D V+S + +GLA DWI +IYW DS L + V D G R L ++N ++PR +++D
Sbjct: 478 DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVD 537
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL
Sbjct: 538 PVHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 595
Query: 261 FI 262
I
Sbjct: 596 SI 597
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLD 200
+V + G+ D + G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 567 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF 626
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 627 EDK----VFWTD 634
>gi|308485142|ref|XP_003104770.1| CRE-LRP-2 protein [Caenorhabditis remanei]
gi|308257468|gb|EFP01421.1| CRE-LRP-2 protein [Caenorhabditis remanei]
Length = 4864
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 151/308 (49%), Gaps = 54/308 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGL-CSNTCHPTPLGALCTCPPGEILSN 63
C++ ++CDGK DCP G DEG C +C L CS+TC TP G +C+CP L
Sbjct: 1261 CISDKQLCDGKNDCPGGDDEGIWCSF-KCNATNELGCSHTCRATPSGPICSCPDEHYLDK 1319
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D VTC + C + G CSQ C ++C C +G+ L D +C + + +LI SNR
Sbjct: 1320 DGVTCSKKDPC-RFGQCSQHCIPHGSRHLCYCEDGFKLSNDGFSCVSDDPQKPYLIYSNR 1378
Query: 124 HSILVADLEEKGK----------------------------------------DHRA--- 140
H I + + G D R
Sbjct: 1379 HEIRMIQSKYPGSSPMISSLVNAIALDFKYNTNGSVSIYWTDLSSDKIYAGLVDQRTILY 1438
Query: 141 -QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+ IV G+ EG+A DWI G+IYW+DS L+ I+V E+G+ R + +N+ R + +
Sbjct: 1439 QRTIVSYGVYNAEGIAIDWITGNIYWIDSYLDTIQVISEDGSKRGTVVNENMGNARSLAI 1498
Query: 200 DPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTI--IS--TKIYWPNGLTLDIATRRVYF 254
D G +FWTDW E NPRIER + G +R+ + IS + WPNG+ LD ++RVY+
Sbjct: 1499 DVEEG--LMFWTDWEEANPRIERCSLAGKDRAVVWKISNVAQAGWPNGIALDTISKRVYW 1556
Query: 255 ADSKLDFI 262
D+K D I
Sbjct: 1557 VDAKSDSI 1564
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 171/427 (40%), Gaps = 112/427 (26%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNT---------CHPTPLGALCTC 55
C+ ++CDGK DC +G DE CDL + G CS+T CH C+C
Sbjct: 3057 CLQEKQLCDGKKDCMSGLDEK--CDLPQ-----GNCSSTRNSCEQPWNCHRHAGFETCSC 3109
Query: 56 PPGEILSN-DSVTCQDMNECEQPGYCSQMCTNTKG-SYICSCNEGYVLEYDNHTCK---- 109
G LS D TC C + CS C + + + C C GY+L + C+
Sbjct: 3110 DEGFHLSPYDKKTCLRSPSCPKAN-CSHFCIDRRDIGHQCFCAPGYILADNQRDCRRNDT 3168
Query: 110 ----------------AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDL--- 150
IN A ++SN + + D + K D+ SG
Sbjct: 3169 IEPEILLVYGHRLKLFTINGHAKATLLSNLTNGVALDYDVKSDLIYWTDVTNSGNKAGIV 3228
Query: 151 -------------------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGT-NRIVLAKDN 190
++G+A DW+G +IY+ D + I VCD G NRI+L
Sbjct: 3229 SMSNQPNTYRIINSLPTKGIDGIAVDWLGRNIYYTDRNHDAIAVCDMRGRFNRILLKGTP 3288
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK-IYWPNGLTLDIAT 249
+ PR ++LDP G +FWTDWG + I R+ MDG++ I+ + I WPN L +D
Sbjct: 3289 LNDPRAIVLDPIHG--LIFWTDWGASAHIGRMNMDGTSEQIILEDRTIRWPNALAVDTPA 3346
Query: 250 RRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL 309
+R+YF D+ D+ I N DG+ I+
Sbjct: 3347 QRLYFGDAHRDY----------------------------------IASCNYDGTKRRIV 3372
Query: 310 VSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIY 368
+ + AL + +++W+DW N IER+ + G NR +I K Y
Sbjct: 3373 LRKSVRHIFALAVFED-----------YVYWSDW-HNHTIERVHKITGDNRKILIQDKQY 3420
Query: 369 WPNGLTL 375
P G +
Sbjct: 3421 RPMGFKI 3427
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 15/150 (10%)
Query: 123 RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGT 181
R S+++ +++ + ++G+ EG+AYD ++Y D + I V N +
Sbjct: 651 RRSLVIQKMDQSNATYHG----LTGVMNCEGMAYDHTSDNLYMTDQKRKLITVQRLSNLS 706
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN--------PRIERIGMDGSNRSTII 233
+ ++ N++ PR + + + +LFW W E IER +DG+ R T++
Sbjct: 707 IQKIVVSGNMSNPRAIAIHIAKS--YLFWGSWSEENADDESIPAMIERSKLDGTERKTLV 764
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFID 263
S W NGL LD+ +Y+ D+ + I+
Sbjct: 765 SKNAMWINGLALDLKNDFLYWCDAYRNVIE 794
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 18/178 (10%)
Query: 242 GLTLDIATRRVYFAD------SKLDFIDCKSLEIKTNVN------YSTIFRKLYWIDEGG 289
+ DI+ RR+YFAD S +++ + + I +V Y + R+LY++
Sbjct: 2374 AIAADISRRRIYFADYDKFRISAVNYDGTQCVVIAEDVGVVPSMAYDEVNRELYYV---- 2429
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWG-ENPR 348
P I + ++ ++ + L L + + + + C LF+T+
Sbjct: 2430 RANPASIWRIDVSDNDLESY-PKEPRVVLTLTIRDRPRHIAINPCRMLLFFTNNAVTGSV 2488
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
IER+ G R I+ ++ GLT+D+ + ++YF+DSK I C+YDG+ R+ V+
Sbjct: 2489 IERVFFSGFKREQIVQEDLHDLRGLTIDLDSEKLYFSDSKDFKISRCDYDGSHREIVV 2546
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 87/224 (38%), Gaps = 53/224 (23%)
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ +P + DP G R L + + I++ MD SN + T + G+ D +
Sbjct: 629 VKRPSAITFDPK-GPRILMFDLKRRSLVIQK--MDQSNATYHGLTGVMNCEGMAYDHTSD 685
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
+Y D K RKL + N L I K I+V
Sbjct: 686 NLYMTDQK---------------------RKLITVQRLSN---LSIQK---------IVV 712
Query: 311 SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN--------PRIERIGMDGSNRSTI 362
SG + A+ + Y LFW W E IER +DG+ R T+
Sbjct: 713 SGNMSNPRAIAIHIAKSY---------LFWGSWSEENADDESIPAMIERSKLDGTERKTL 763
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+S W NGL LD+ +Y+ D+ + I+ ++G+ R+ +I
Sbjct: 764 VSKNAMWINGLALDLKNDFLYWCDAYRNVIERIRWNGSDREILI 807
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 11/125 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWL---DSRLNRIEVCDEN-----GTNRIVLAKDNITQP 194
++ + +V +AYD + +Y++ + + RI+V D + R+VL +P
Sbjct: 2406 VIAEDVGVVPSMAYDEVNRELYYVRANPASIWRIDVSDNDLESYPKEPRVVLTLTIRDRP 2465
Query: 195 RGMMLDPSPGTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
R + ++P LF+T+ IER+ G R I+ ++ GLT+D+ + ++Y
Sbjct: 2466 RHIAINPC--RMLLFFTNNAVTGSVIERVFFSGFKREQIVQEDLHDLRGLTIDLDSEKLY 2523
Query: 254 FADSK 258
F+DSK
Sbjct: 2524 FSDSK 2528
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+CV L K CDGK DC +G+DE C + + C T G C CP +IL N
Sbjct: 141 QCVPLFKFCDGKLDCSDGSDEHAMCHVED-PTTADKCEYGAAMTMDGIKCYCPGNKIL-N 198
Query: 64 DSVTCQDMNECEQ-----PGYCSQMCTNTK-GSYICSC 95
+ C+ ++ C + P CSQ C++ K G++ CSC
Sbjct: 199 EKGKCEFLDYCAKVKNGLPPVCSQGCSDHKNGTFSCSC 236
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 112/316 (35%), Gaps = 73/316 (23%)
Query: 9 TKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTC 68
T +CDG DC +G+DE P C+ KF + C + L C + + S
Sbjct: 3861 TALCDGIKDCVDGSDEAPAHCRDMCRDKFKCTNGRC----IDELARCDGRDDCGDGSDED 3916
Query: 69 QDMNECEQPGYCSQMC-TNTKGSYICSCNEGYV-LEYDNHTCKAINHSAAFLIISNR--H 124
EC G C Q C + C C GY ++D + C+ ++ S + + + H
Sbjct: 3917 TCGLECHHFGTCPQKCWIAYNSTARCHCAPGYARTKHDLNGCEPLSKSTEMFLSNGKQLH 3976
Query: 125 SILVADLEEKGKDHRAQDIVVSGLDL---------------------------------- 150
+LV + + + D++ D
Sbjct: 3977 LMLVDNASLRTVFNYKMDLIPGRFDFGYDMYRTILMYSVGVGNNRVDIRSKKWSETTLTD 4036
Query: 151 ---------VEGL-AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
GL AYD++ ++Y+ +S V N I +++ T R ++++
Sbjct: 4037 RWGERTDDSTAGLIAYDFMHNNVYFTESSKYSPGVLFHTQEN-IYISRSKNTNTRTLVVN 4095
Query: 201 PS---------PGTRWLFWTDWGENPRIERIGMDGSNRS-----------TIISTKIYWP 240
+ P R LFWT PRI +DG+ S ++ I+ P
Sbjct: 4096 STGSINSIAVDPIERLLFWTTVAPVPRILSAHLDGTPLSQPFKTGSQPHKALVERNIFEP 4155
Query: 241 NGLTLDIATRRVYFAD 256
L LD R+Y+ D
Sbjct: 4156 RSLVLDSPNVRLYWID 4171
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 30/152 (19%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLE---NGMLYYSTLKCTRWLFWTDWGENPRIE 350
+++ ++ GS+ I L A+ALD + NG + ++WTD + +I
Sbjct: 1381 IRMIQSKYPGSSPMI---SSLVNAIALDFKYNTNGSVS---------IYWTDLSSD-KIY 1427
Query: 351 RIGMDGSN---RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+D + TI+S +Y G+ +D T +Y+ DS LD I + DG+ R V+
Sbjct: 1428 AGLVDQRTILYQRTIVSYGVYNAEGIAIDWITGNIYWIDSYLDTIQVISEDGSKRGTVV- 1486
Query: 408 IDLMVEFTNDLMGDNGVPALALDLENGMLYYS 439
N+ MG+ +LA+D+E G+++++
Sbjct: 1487 --------NENMGN--ARSLAIDVEEGLMFWT 1508
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 23/116 (19%)
Query: 336 RWLFWTDWGENPRIERIGMDGSNRS-----------TIISTKIYWPNGLTLDIATRRVYF 384
R LFWT PRI +DG+ S ++ I+ P L LD R+Y+
Sbjct: 4110 RLLFWTTVAPVPRILSAHLDGTPLSQPFKTGSQPHKALVERNIFEPRSLVLDSPNVRLYW 4169
Query: 385 ADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYST 440
D ++ ++DG R+ V +L G +++DL G +Y T
Sbjct: 4170 IDGFKRTVETVSFDGKDRRTVRKFEL------------GDTPVSMDLLGGYIYLVT 4213
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSN 42
+C+ LT VCD K DC +G+DE CD+ CK F C N
Sbjct: 3587 KCIPLTSVCDNKKDCHDGSDEKE-CDIKSCKPDFFACVN 3624
>gi|32880123|gb|AAP88892.1| low density lipoprotein receptor (familial hypercholesterolemia)
[synthetic construct]
gi|60653923|gb|AAX29654.1| low density lipoprotein receptor [synthetic construct]
Length = 861
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 153/302 (50%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 288 ECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLV 347
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
C+D++EC+ P CSQ+C N +G Y C C EG+ L+ CKA+ S A+L +N
Sbjct: 348 AQR-RCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG-SIAYLFFTN 405
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L ++ +
Sbjct: 406 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY 465
Query: 142 DIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D V+S + +GLA DWI +IYW DS L + V D G R L ++N ++PR +++D
Sbjct: 466 DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVD 525
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL
Sbjct: 526 PVHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 583
Query: 261 FI 262
I
Sbjct: 584 SI 585
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLD 200
+V + G+ D + G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 555 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF 614
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 615 EDK----VFWTD 622
>gi|4504975|ref|NP_000518.1| low-density lipoprotein receptor isoform 1 precursor [Homo sapiens]
gi|126073|sp|P01130.1|LDLR_HUMAN RecName: Full=Low-density lipoprotein receptor; Short=LDL receptor;
Flags: Precursor
gi|307121|gb|AAA56833.1| low density lipoprotein receptor [Homo sapiens]
gi|15680298|gb|AAH14514.1| Low density lipoprotein receptor [Homo sapiens]
gi|21629648|gb|AAM56036.1| low density lipoprotein receptor [Homo sapiens]
gi|30583561|gb|AAP36025.1| low density lipoprotein receptor (familial hypercholesterolemia)
[Homo sapiens]
gi|32187681|gb|AAP72971.1| low density lipoprotein receptor [Homo sapiens]
gi|61362288|gb|AAX42194.1| low density lipoprotein receptor [synthetic construct]
gi|119604575|gb|EAW84169.1| low density lipoprotein receptor (familial hypercholesterolemia),
isoform CRA_b [Homo sapiens]
gi|119604577|gb|EAW84171.1| low density lipoprotein receptor (familial hypercholesterolemia),
isoform CRA_b [Homo sapiens]
gi|123994407|gb|ABM84805.1| low density lipoprotein receptor (familial hypercholesterolemia)
[synthetic construct]
gi|225131047|gb|ACN81317.1| low density lipoprotein receptor [Homo sapiens]
Length = 860
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 153/302 (50%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 288 ECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLV 347
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
C+D++EC+ P CSQ+C N +G Y C C EG+ L+ CKA+ S A+L +N
Sbjct: 348 AQR-RCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG-SIAYLFFTN 405
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L ++ +
Sbjct: 406 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY 465
Query: 142 DIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D V+S + +GLA DWI +IYW DS L + V D G R L ++N ++PR +++D
Sbjct: 466 DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVD 525
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL
Sbjct: 526 PVHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 583
Query: 261 FI 262
I
Sbjct: 584 SI 585
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLD 200
+V + G+ D + G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 555 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF 614
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 615 EDK----VFWTD 622
>gi|351711405|gb|EHB14324.1| Low-density lipoprotein receptor-related protein 6 [Heterocephalus
glaber]
Length = 1619
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 118/336 (35%), Positives = 172/336 (51%), Gaps = 62/336 (18%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 120 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 179
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++
Sbjct: 180 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFVIINTEIYWPNGLTLDYEERKL 237
Query: 253 YFADSKLDFIDCKSLEIKTNVNY---------STIFRKL----------------YWIDE 287
Y+AD+KL+FI +L+ TN Y S IF + ID
Sbjct: 238 YWADAKLNFIHKSNLD-GTNSKYTGEGLREIHSNIFSPMDIHAFSQQRQPNATNPCGIDN 296
Query: 288 GG-------------------NGVP-LKIGKANMDGSNASILVSGQL-YEALALDLENGM 326
GG GV L+ GK +G+ +L++ + ++LD +
Sbjct: 297 GGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKNGATELLLLARRTDLRRISLDTPDFT 356
Query: 327 LYYSTLKCTR------------WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
L+ R +++WTD E I R +DGS +++ +I P+G+
Sbjct: 357 DIVLQLEDIRHAIAIDYDPVEGYIYWTD-DEVRAIRRSFIDGSGSQFVVTAQIAHPDGIA 415
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+D R +Y+ D+ D I+ +GT R+ +I DL
Sbjct: 416 VDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDL 451
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 141/329 (42%), Gaps = 93/329 (28%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI--------- 126
G CS +C + K Y C+C G L + TCK N + L+++ R +
Sbjct: 297 GGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCK--NGATELLLLARRTDLRRISLDTPD 354
Query: 127 ---LVADLEE------------------KGKDHRA-----------QDIVVSGLDLVEGL 154
+V LE+ + RA Q +V + + +G+
Sbjct: 355 FTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGI 414
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++LDP G +++WTDWG
Sbjct: 415 AVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVG--YMYWTDWG 472
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
E P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K D
Sbjct: 473 EIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTD-------------- 518
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
KI N DG+ +LV ++ L +Y
Sbjct: 519 --------------------KIEVMNTDGTGRRVLVEDKIPHIFGFTLLGNYVY------ 552
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ + R II
Sbjct: 553 -----WTDW-QRRSIERVHKRSAEREIII 575
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 596 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 652
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 653 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 712
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 713 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPTEG--FMYW 770
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 771 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 826
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 648 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 707
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 708 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 763
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 764 TEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 811
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 812 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 842
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 126/310 (40%), Gaps = 78/310 (25%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 897 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 953
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG------- 180
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G
Sbjct: 954 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1009
Query: 181 -------------------------------TNRI-----------VLAKDNITQPRGMM 198
TN I V+ K + +PR ++
Sbjct: 1010 VSSVPNQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSIGVVLKGDQDRPRAIV 1069
Query: 199 LDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++P G ++++T+ E +P+IER +DG+ R + + + P L LD ++++ADS
Sbjct: 1070 VNPEKG--YMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADS 1127
Query: 258 KLDFIDCKSLE-----------IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
L I+ L I V + LYWID+ I K +M G
Sbjct: 1128 DLRRIESSDLSGANRIVLEDSNILQPVGLTVFENWLYWIDKQQQ----MIEKIDMTGREG 1183
Query: 307 SILVSGQLYE 316
V ++ +
Sbjct: 1184 RTKVQARIAQ 1193
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 779 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 837
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 838 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 892
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 893 QAGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 952
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 953 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1009
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1010 VSSVPNQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSIGVV------------ 1057
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L GD P A+ ++ E G +Y++
Sbjct: 1058 LKGDQDRPRAIVVNPEKGYMYFT 1080
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
G L++ A NA+I+V G L +A A+D G ++W+D E I+
Sbjct: 69 GRDLRLVDATNGKENATIVVGG-LEDAAAVDFVFGHGL---------IYWSDVSEEA-IK 117
Query: 351 RIGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
R + + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +
Sbjct: 118 RTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQE 177
Query: 410 LMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
L + A+ALD +G +Y++ G
Sbjct: 178 L-----------DQPRAIALDPSSGFMYWTDWG 199
>gi|619647|gb|AAA59384.1| very low density lipoprotein receptor [Mus musculus]
Length = 873
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 169/362 (46%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVCD + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDMSKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEKG-------------------------KDHRAQDIVVSGLDLVEG--- 153
NR I LE K D + I + +D G
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHF 506
Query: 154 -----------LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+A DW+ IYW D+ I V +G R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGAKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 32/204 (15%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
I +IG++ ++ ++ L DIA +++++AD I S++ K ++ I
Sbjct: 451 IRKIGLERKEYIQLVE-QLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHFKMI 509
Query: 279 --------------FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDL 322
++ +YW D + + A +DG+ L + L E ++A+D
Sbjct: 510 DNVYNPAAIAVDWVYKTIYWTDAASKTISV----ATLDGAKRKFLFNSDLREPASIAVDP 565
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+G +Y W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+
Sbjct: 566 LSGFVY-----------WSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRL 614
Query: 383 YFADSKLDFIDFCNYDGTGRQQVI 406
Y+ DSKL + + +G R+ V+
Sbjct: 615 YWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|354507289|ref|XP_003515689.1| PREDICTED: very low-density lipoprotein receptor [Cricetulus
griseus]
Length = 657
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 170/362 (46%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVCD + DC + +DE C++ EC G CS+ C +G C C G E++
Sbjct: 278 ECIDISKVCDQEQDCSDWSDEPLKECNVNECLVNNGGCSHICKDLVIGYECDCAAGFELI 337
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 338 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 394
Query: 122 NRHSILVADLEEKG-------------------------KDHRAQDIVVSGLDLVEG--- 153
NR I LE K D + I + +D G
Sbjct: 395 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHF 454
Query: 154 -----------LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+A DW+ IYW D+ I V +G R L ++ +P + +DP
Sbjct: 455 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGAKRKFLFNSDLREPASIAVDPL 514
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 515 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTDDIQWPNGITLDLVKSRLYWLDSKLHML 572
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 573 SSVDLDGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 629
Query: 310 VS 311
V+
Sbjct: 630 VN 631
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 32/204 (15%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
I +IG++ ++ ++ L DIA +++++AD I S++ K ++ I
Sbjct: 399 IRKIGLERKEYIQLVE-QLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHFKMI 457
Query: 279 --------------FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDL 322
++ +YW D + + A +DG+ L + L E ++A+D
Sbjct: 458 DNVYNPAAIAVDWVYKTIYWTDAASKTISV----ATLDGAKRKFLFNSDLREPASIAVDP 513
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+G +Y W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+
Sbjct: 514 LSGFVY-----------WSDWGEPAKIEKAGMNGFDRRPLVTDDIQWPNGITLDLVKSRL 562
Query: 383 YFADSKLDFIDFCNYDGTGRQQVI 406
Y+ DSKL + + DG R+ V+
Sbjct: 563 YWLDSKLHMLSSVDLDGQDRRIVL 586
>gi|609533|gb|AAC37668.1| very low density lipoprotein receptor [Mus musculus]
Length = 873
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 169/362 (46%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVCD + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDMSKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEKG-------------------------KDHRAQDIVVSGLDLVEG--- 153
NR I LE K D + I + +D G
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHF 506
Query: 154 -----------LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+A DW+ IYW D+ I V +G R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGAKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 32/204 (15%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
I +IG++ ++ ++ L DIA +++++AD I S++ K ++ I
Sbjct: 451 IRKIGLERKEYIQLVE-QLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHFKMI 509
Query: 279 --------------FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDL 322
++ +YW D + + A +DG+ L + L E ++A+D
Sbjct: 510 DNVYNPAAIAVDWVYKTIYWTDAASKTISV----ATLDGAKRKFLFNSDLREPASIAVDP 565
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+G +Y W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+
Sbjct: 566 LSGFVY-----------WSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRL 614
Query: 383 YFADSKLDFIDFCNYDGTGRQQVI 406
Y+ DSKL + + +G R+ V+
Sbjct: 615 YWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|431898654|gb|ELK07034.1| Very low-density lipoprotein receptor [Pteropus alecto]
Length = 874
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/363 (31%), Positives = 172/363 (47%), Gaps = 63/363 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDVSKVCNQEQDCKDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQDIV---------------------- 144
NR I LE K D AQ +
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKVFWADLSQKAIFSASIDDDKVGRH 506
Query: 145 VSGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
V +D V +A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 507 VKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDP 566
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++W+DWGE +IE+ GM+G +R +++ +I WPNG+TLD+ R+Y+ DSKL
Sbjct: 567 LSG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTMEIQWPNGITLDLIKSRLYWLDSKLHM 624
Query: 262 IDC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASI 308
+ KSLE + TIF ++YWID V G GS +
Sbjct: 625 LSSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELAT 681
Query: 309 LVS 311
LV+
Sbjct: 682 LVN 684
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 33/205 (16%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE---------- 268
I +IG++ ++ ++ L DIA ++V++AD I S++
Sbjct: 451 IRKIGLERKEYIQLVE-QLRNTVALDADIAAQKVFWADLSQKAIFSASIDDDKVGRHVKM 509
Query: 269 IKTNVNYSTI-----FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALD 321
I N + I ++ +YW D + + A +DG+ L + L E ++A+D
Sbjct: 510 IDNVYNPAAIAVDWVYKTIYWTDAASKTISV----ATLDGTKRKFLFNSDLREPASIAVD 565
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 381
+G +Y W+DWGE +IE+ GM+G +R +++ +I WPNG+TLD+ R
Sbjct: 566 PLSGFVY-----------WSDWGEPAKIEKAGMNGFDRRPLVTMEIQWPNGITLDLIKSR 614
Query: 382 VYFADSKLDFIDFCNYDGTGRQQVI 406
+Y+ DSKL + + +G R+ V+
Sbjct: 615 LYWLDSKLHMLSSVDLNGQDRRIVL 639
>gi|350412227|ref|XP_003489577.1| PREDICTED: vitellogenin receptor-like [Bombus impatiens]
Length = 1668
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 169/357 (47%), Gaps = 54/357 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC++L C+ K +C + +DE C A+ K C + C TP GA C+C PG L
Sbjct: 86 RCISLNATCNEKDNCGDNSDEDIDACIKADASCKEAKCQHNCRKTPEGAQCSCRPGYKLV 145
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA------------ 110
N+ +C+D+NEC G C Q C N+ GSY CSC GY L D TC+
Sbjct: 146 NNQTSCEDVNECNNYGICDQECINSVGSYTCSCQPGYSLNDDKRTCQTEGGEGLMMFSIK 205
Query: 111 -------INHSAAFLIISN-RHSILV---------ADLEEKGK--------DHRAQDIVV 145
+N + + N +H++ + +D+E+ + + + IV
Sbjct: 206 SEIRGIYLNSRLYYPVTQNLQHAVAISLDANNVYWSDIEDGNEAIIKSLEDGSQREVIVT 265
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL + +A DW+ G+IY+ D I VC+ +G+ V+ K+ +PRG++L PS G
Sbjct: 266 AGLSSPDDMAVDWVTGNIYFTDGGYMHIGVCNNDGSYCTVIIKEQNDKPRGLVLLPSSGI 325
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
++W+ WG + I R GMDG N + ++S + PN L++D A R+Y+ D+K I+
Sbjct: 326 --MYWSKWGMDSCILRAGMDGKNNTVLVSKDLELPNSLSIDYANERLYWIDAKAKVIESV 383
Query: 266 SLE-----------IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
L+ K + + KLYW D N + G N +LVS
Sbjct: 384 RLDGTDRKAILKDIAKRPFSLAVFENKLYWSDWISNTIQ---SCDKFTGKNWEVLVS 437
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 183/416 (43%), Gaps = 90/416 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ VCDGK DC + +DE C A C K+ C+N CH TP+G +C C G LSND
Sbjct: 1117 CLPFANVCDGKVDCSDRSDEFGQCATA-CT-KYNPCTNMCHKTPIGPVCGCRNGYQLSND 1174
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS--- 121
+C+D++EC+ CSQ+C NT GS+ CSC+EGYV+ D +CK + +S
Sbjct: 1175 FKSCEDIDECKN-NVCSQVCYNTNGSFTCSCHEGYVIRSDKISCKVAGSQMEIITVSSAD 1233
Query: 122 ------NRHSILVA----DLEEKGKDHRAQD-----------------------IVVSGL 148
N +SI V + E G D ++ +V+GL
Sbjct: 1234 IRKLSPNLNSIQVIYEELNPEISGIDANTRENTIYWSNDILGTVSKINMKTKERKIVTGL 1293
Query: 149 DLVEGLAYDWIGGHIYWLDSR-LNRIEVC--DENGTNRIVLAKDNITQPRGMMLDPSPGT 205
LA DWI ++Y+ D+ + ++VC ++ ++V N R + + P
Sbjct: 1294 GRPGALAIDWITDNVYFNDNDYFSSVQVCNLEQQKCAKVVSIPLN---NRAVSIAVEPKE 1350
Query: 206 RWLFW--TDWGENPR----IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
WLFW T W R I R G+N + I+ + LT+D R+Y++D+
Sbjct: 1351 GWLFWSQTSWTSYDRPMTEIYRSNTMGTNITAIVHRDLGIVFALTIDYTRSRLYWSDT-- 1408
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
F K I +N+DGSN I+++ +++AL+
Sbjct: 1409 -------------------FHK-------------NIESSNLDGSNRIIVLNTDVHQALS 1436
Query: 320 LDLENGMLYY---STLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
+ + LY+ +T K + + D ++ IG+ ++ IIS + P G
Sbjct: 1437 ISIYEDSLYWLMSTTGKVKKCKLYGD--KSCVTITIGISNIDKYFIISHPMRQPIG 1490
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/312 (19%), Positives = 116/312 (37%), Gaps = 75/312 (24%)
Query: 80 CSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI------ISNRHSIL-VADL 131
CSQ+C N+ SY C+C L DNHTC+A+ +I I H +L +
Sbjct: 465 CSQLCLLNSANSYTCACTLDKELNSDNHTCRAVKKKTHLIIAAGSTFIDYYHELLGKPKI 524
Query: 132 EEKGKDHRAQDIVVSGL--------------------------------DLVEGLAYDWI 159
+ ++V + L +++ G+ +D+I
Sbjct: 525 TTSDTLNHVTEVVYNPLTGGLLASDQLRDNIFHFNMQTGEEKSMMSIENEILGGMDFDYI 584
Query: 160 GGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRI 219
G ++Y D + IEV N + + + +P + L P + + E RI
Sbjct: 585 GNNLYLSDVKHKTIEVHSLNNNEKTIFYFQD--EPYDIALVPEENIMMVVFRT-NELYRI 641
Query: 220 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIF 279
+ + M+G G + I + + K+ Y +
Sbjct: 642 DLMNMNGL--------------GPRVTIEGNKTHLIGPKISLC------------YDRVL 675
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLF 339
+ L+W D+G +IG + G I +G L E ++L + N ++++ K + L+
Sbjct: 676 KLLFWSDQGTG----RIGSTTIPGFETYIFRTG-LLEPVSLTVLNDYVFWTQYKSNK-LY 729
Query: 340 WTDWGENPRIER 351
WT+ + ++
Sbjct: 730 WTNKSSTQQYQK 741
>gi|443731492|gb|ELU16597.1| hypothetical protein CAPTEDRAFT_170076 [Capitella teleta]
Length = 1457
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/257 (35%), Positives = 135/257 (52%), Gaps = 43/257 (16%)
Query: 53 CTCPPGEILSNDSVTCQDMNECEQ-PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI 111
C CP G + D TC D++EC++ PG C+Q+C NT GSY CSC +GYV E D CK
Sbjct: 11 CGCPGGYAVRADKKTCSDIDECQEYPGICAQLCVNTVGSYTCSCGDGYVAESDGAICKRT 70
Query: 112 NHSAAFLIISNRHSILVADLEEKGKDHRAQD----------------------------- 142
+ +LI NR+ + +L+ G +H ++D
Sbjct: 71 DDVDPYLIFGNRYYVRKMNLDGSGFEHVSKDHEYTHVLDYDYKENKVYLVDAGSGQLVEM 130
Query: 143 -----------IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI 191
I S ++ EG+A DW+G +YW +++ N I V + NGT+ VL +D
Sbjct: 131 SLDGEDKKASAIPASYVENTEGIAVDWVGKKLYWTNNKQNGIFVSETNGTSIHVLLRDGS 190
Query: 192 TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
+PR + L P G +L+W+DW P I R+GMDG + II+ IYWPNGLT+D T +
Sbjct: 191 PRPRAIALYPQTG--YLYWSDWSLIPFIARVGMDGRGMTKIITEGIYWPNGLTIDFVTNQ 248
Query: 252 VYFADSKLDFIDCKSLE 268
+++ D+ LD I+ +L+
Sbjct: 249 IWWVDAHLDRIEFSNLD 265
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 33/211 (15%)
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS--------KLDFIDC 264
+G + ++ +DGS + S + + L D +VY D+ LD D
Sbjct: 79 FGNRYYVRKMNLDGSGFEHV-SKDHEYTHVLDYDYKENKVYLVDAGSGQLVEMSLDGEDK 137
Query: 265 KSLEIKTNVNYST-------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILV--SGQLY 315
K+ I + +T + +KLYW + NG+ + + +G++ +L+
Sbjct: 138 KASAIPASYVENTEGIAVDWVGKKLYWTNNKQNGIFV----SETNGTSIHVLLRDGSPRP 193
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
A+AL + G LY W+DW P I R+GMDG + II+ IYWPNGLT+
Sbjct: 194 RAIALYPQTGYLY-----------WSDWSLIPFIARVGMDGRGMTKIITEGIYWPNGLTI 242
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
D T ++++ D+ LD I+F N DGT R +
Sbjct: 243 DFVTNQIWWVDAHLDRIEFSNLDGTNRHTAL 273
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 10/123 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
QD+ ++ ++ GLA DW+ G+IYW D LN I VC ++G + + G + D
Sbjct: 1019 QDLKIAAMESPNGLAVDWVTGNIYWSDGVLNNIYVCGDDGNYKATVLS-------GALYD 1071
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKL 259
P L++ + P+I R MDG T+IS ++ P L +D + R+++ D L
Sbjct: 1072 VKP--TMLYFINIKGTPKIMRSYMDGVRVRTLISDDLFDPVALAVDYYMSNRIFWTDLSL 1129
Query: 260 DFI 262
+
Sbjct: 1130 GVV 1132
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 158/391 (40%), Gaps = 86/391 (21%)
Query: 1 VADRCVNLTKVCDGKTDCPN-------GADEGPGCDLAECKHKFGLCSNTCHPTPL---- 49
+ DRC+ +VC+ + DC G +G G C G C C P+
Sbjct: 814 ITDRCIGGLQVCNNRNDCGEDDVSDELGCVKGTG---QACSADRGGCEQLCKNLPVIKDT 870
Query: 50 ----GALCTCPPGEILSNDSV-TCQDMNECEQ--PGYCSQMCTNTKGSYICSCNEGYVLE 102
G +C+C + + +C D +EC++ C+Q C NT G++ C C++G+
Sbjct: 871 NLTSGYICSCNDSYVPDPAAPKSCIDKDECKRLVDNKCTQECANTNGAFFCLCSDGFRTT 930
Query: 103 YDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGH 162
+ N+ + + ++ + L ++K K+ + ++ G +L Y+ GG
Sbjct: 931 FKNNLRGVCEPAGRYTLVHLILNYLYPLKKKKKKESKGSIVLSYGNEL---RLYNTSGGE 987
Query: 163 -----IYWLDSRLNRIE--VCDENGTNRIVLAKDNIT---QPRGMMLDPSPGTRWLFWTD 212
+YW DS I+ + EN T + I P G+ +D G ++W+D
Sbjct: 988 EYTFWVYWTDSSALTIKRAIIPENSTELPFVQDLKIAAMESPNGLAVDWVTGN--IYWSD 1045
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN 272
N I G DG+ ++T++S +Y D+ +YF + K
Sbjct: 1046 GVLN-NIYVCGDDGNYKATVLSGALY-------DVKPTMLYFINIK-------------- 1083
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
G P KI ++ MDG L+S L++ +AL ++ YY +
Sbjct: 1084 ------------------GTP-KIMRSYMDGVRVRTLISDDLFDPVALAVD----YYMSN 1120
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+ +FWTD + + G +R ++I
Sbjct: 1121 R----IFWTDLSLG-VVTSVNPQGQDRVSLI 1146
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 80/190 (42%), Gaps = 25/190 (13%)
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFID---CKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
+YW + L I + ++L F+ ++E + + +YW D GV
Sbjct: 993 VYWTDSSALTIKRAIIPENSTELPFVQDLKIAAMESPNGLAVDWVTGNIYWSD----GVL 1048
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
I DG+ + ++SG LY D++ MLY+ +K T P+I R
Sbjct: 1049 NNIYVCGDDGNYKATVLSGALY-----DVKPTMLYFINIKGT-----------PKIMRSY 1092
Query: 354 MDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
MDG T+IS ++ P L +D + R+++ D L + N G R +I D+
Sbjct: 1093 MDGVRVRTLISDDLFDPVALAVDYYMSNRIFWTDLSLGVVTSVNPQGQDRVSLIR-DMNR 1151
Query: 413 EFTNDLMGDN 422
+ D+ N
Sbjct: 1152 PYNLDVFAGN 1161
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 127 LVADLEEKGKDHRAQ-DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
L+ + G D R I+ G+ GL D++ I+W+D+ L+RIE + +GTNR
Sbjct: 212 LIPFIARVGMDGRGMTKIITEGIYWPNGLTIDFVTNQIWWVDAHLDRIEFSNLDGTNRHT 271
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDW 213
+ P G + + ++WT+W
Sbjct: 272 ALS---SVPHGFSI--TLFETNVYWTEW 294
>gi|238637303|ref|NP_038731.2| very low-density lipoprotein receptor isoform a precursor [Mus
musculus]
gi|1730112|sp|P98156.1|VLDLR_MOUSE RecName: Full=Very low-density lipoprotein receptor; Short=VLDL
receptor; Short=VLDL-R; Flags: Precursor
gi|148709699|gb|EDL41645.1| very low density lipoprotein receptor, isoform CRA_a [Mus musculus]
Length = 873
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 169/362 (46%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVCD + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDMSKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEKG-------------------------KDHRAQDIVVSGLDLVEG--- 153
NR I LE K D + I + +D G
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHF 506
Query: 154 -----------LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+A DW+ IYW D+ I V +G R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGAKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 32/204 (15%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
I +IG++ ++ ++ L DIA +++++AD I S++ K ++ I
Sbjct: 451 IRKIGLERKEYIQLVE-QLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHFKMI 509
Query: 279 --------------FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDL 322
++ +YW D + + A +DG+ L + L E ++A+D
Sbjct: 510 DNVYNPAAIAVDWVYKTIYWTDAASKTISV----ATLDGAKRKFLFNSDLREPASIAVDP 565
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+G +Y W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+
Sbjct: 566 LSGFVY-----------WSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRL 614
Query: 383 YFADSKLDFIDFCNYDGTGRQQVI 406
Y+ DSKL + + +G R+ V+
Sbjct: 615 YWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|397520987|ref|XP_003830588.1| PREDICTED: low-density lipoprotein receptor [Pan paniscus]
Length = 972
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 153/301 (50%), Gaps = 47/301 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 289 CITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVA 348
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
C+D++EC+ P CSQ+C N +G Y C C EG+ L+ CKA+ S A+L +NR
Sbjct: 349 QR-RCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG-SIAYLFFTNR 406
Query: 124 HSI------------LVADLE-----------------------------EKGKDHRAQD 142
H + L+ +L ++ + D
Sbjct: 407 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD 466
Query: 143 IVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
V+S + +GLA DWI +IYW DS L + V D G R L ++N ++PR +++DP
Sbjct: 467 TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDP 526
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL
Sbjct: 527 VHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 584
Query: 262 I 262
I
Sbjct: 585 I 585
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLD 200
+V + G+ D + G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 555 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTVLEDEKRLAHPFSLAVF 614
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 615 EDK----VFWTD 622
>gi|344297687|ref|XP_003420528.1| PREDICTED: very low-density lipoprotein receptor isoform 2
[Loxodonta africana]
Length = 845
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 174/362 (48%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C+++++VCD + DC + +DE C++ EC G CS+ C +G C C G E++
Sbjct: 330 ECIDISQVCDREQDCRDWSDEPLKECNVNECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQ------------------DIVVSGL 148
NR I LE K D AQ D V +
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 506
Query: 149 DLVE------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+++ +A DW+ IYW D+ I V +GT R +L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKLLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLC--SNTCHPTPL 49
CV+ T+ C+G DC +G+DE GPG C EC +C C
Sbjct: 290 CVHGTRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISQVCDREQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 350 EPLKECNVNECLVNN-------------GGCSHICKDLVIGYECDCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCK-AVGKEPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ +L + L E ++A+D +G +Y W+DWGE
Sbjct: 534 SKTISV----ATLDGTKRKLLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|344297685|ref|XP_003420527.1| PREDICTED: very low-density lipoprotein receptor isoform 1
[Loxodonta africana]
Length = 873
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 174/362 (48%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C+++++VCD + DC + +DE C++ EC G CS+ C +G C C G E++
Sbjct: 330 ECIDISQVCDREQDCRDWSDEPLKECNVNECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQ------------------DIVVSGL 148
NR I LE K D AQ D V +
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 506
Query: 149 DLVE------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+++ +A DW+ IYW D+ I V +GT R +L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKLLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLC--SNTCHPTPL 49
CV+ T+ C+G DC +G+DE GPG C EC +C C
Sbjct: 290 CVHGTRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISQVCDREQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 350 EPLKECNVNECLVNN-------------GGCSHICKDLVIGYECDCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCK-AVGKEPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ +L + L E ++A+D +G +Y W+DWGE
Sbjct: 534 SKTISV----ATLDGTKRKLLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|148709700|gb|EDL41646.1| very low density lipoprotein receptor, isoform CRA_b [Mus musculus]
Length = 855
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 169/362 (46%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVCD + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 340 ECIDMSKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 399
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 400 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 456
Query: 122 NRHSILVADLEEKG-------------------------KDHRAQDIVVSGLDLVEG--- 153
NR I LE K D + I + +D G
Sbjct: 457 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHF 516
Query: 154 -----------LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+A DW+ IYW D+ I V +G R L ++ +P + +DP
Sbjct: 517 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGAKRKFLFNSDLREPASIAVDPL 576
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 577 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLYWLDSKLHML 634
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 635 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 691
Query: 310 VS 311
V+
Sbjct: 692 VN 693
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 32/204 (15%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
I +IG++ ++ ++ L DIA +++++AD I S++ K ++ I
Sbjct: 461 IRKIGLERKEYIQLVE-QLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHFKMI 519
Query: 279 --------------FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDL 322
++ +YW D + + A +DG+ L + L E ++A+D
Sbjct: 520 DNVYNPAAIAVDWVYKTIYWTDAASKTISV----ATLDGAKRKFLFNSDLREPASIAVDP 575
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+G +Y W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+
Sbjct: 576 LSGFVY-----------WSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRL 624
Query: 383 YFADSKLDFIDFCNYDGTGRQQVI 406
Y+ DSKL + + +G R+ V+
Sbjct: 625 YWLDSKLHMLSSVDLNGQDRRIVL 648
>gi|238637305|ref|NP_001154892.1| very low-density lipoprotein receptor isoform b precursor [Mus
musculus]
gi|15489005|gb|AAH13622.1| Vldlr protein [Mus musculus]
Length = 845
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 169/362 (46%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVCD + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDMSKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEKG-------------------------KDHRAQDIVVSGLDLVEG--- 153
NR I LE K D + I + +D G
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHF 506
Query: 154 -----------LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+A DW+ IYW D+ I V +G R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGAKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 32/204 (15%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
I +IG++ ++ ++ L DIA +++++AD I S++ K ++ I
Sbjct: 451 IRKIGLERKEYIQLVE-QLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHFKMI 509
Query: 279 --------------FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDL 322
++ +YW D + + A +DG+ L + L E ++A+D
Sbjct: 510 DNVYNPAAIAVDWVYKTIYWTDAASKTISV----ATLDGAKRKFLFNSDLREPASIAVDP 565
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+G +Y W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+
Sbjct: 566 LSGFVY-----------WSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRL 614
Query: 383 YFADSKLDFIDFCNYDGTGRQQVI 406
Y+ DSKL + + +G R+ V+
Sbjct: 615 YWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|262073126|ref|NP_001160002.1| low-density lipoprotein receptor precursor [Bos taurus]
gi|296485885|tpg|DAA28000.1| TPA: low-density lipoprotein receptor [Bos taurus]
Length = 845
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 154/302 (50%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 290 ECISLDKVCNSVRDCRDWSDEPLKDCGTNECLDNKGGCSHICNDLKIGYECLCPEGFQLV 349
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
C+D++EC+ P CSQ+C N +GSY C C EG+ LE CKA+ + A+L +N
Sbjct: 350 GKH-RCEDIDECQNPDTCSQLCVNLEGSYKCECEEGFRLEPLTKACKAVG-TIAYLFFTN 407
Query: 123 RHSI------------LVADLE-------------------EKGKDHRAQ---------- 141
RH + L+ +L+ + K + AQ
Sbjct: 408 RHEVRKMTLDRSEYTSLIPNLKNVVALDTEVASNRIYWSDLSQRKIYSAQIDGAPGFSSY 467
Query: 142 -DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++ L +GLA DWI +IYW DS L + V D G R L ++ ++PR +++D
Sbjct: 468 DTVIGEDLQAPDGLAVDWIHSNIYWTDSILGTVSVADTKGVKRKTLFQEEGSKPRAIVVD 527
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG I++ G++G + ++++ I WPNG+TLD++ R+Y+ DSKL
Sbjct: 528 PVHG--FMYWTDWGAPAEIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLH 585
Query: 261 FI 262
I
Sbjct: 586 SI 587
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD--NITQPRGMMLD 200
+V + G+ D GG +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 557 LVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSIDVNGGNRKTVLEDKKKLAHPFSLAIF 616
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 617 EDK----VFWTD 624
>gi|432936061|ref|XP_004082101.1| PREDICTED: low-density lipoprotein receptor-related protein 1B-like
[Oryzias latipes]
Length = 4429
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 125/409 (30%), Positives = 169/409 (41%), Gaps = 97/409 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+GK DC + +DEG CD+ C G CS+ C P G +C+CPPG L +
Sbjct: 1156 CLTPDKICNGKVDCADRSDEGAVCDM--CLVARGGCSHQCTVAPGKGVVCSCPPGLHLDS 1213
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
+ TC+ ++ C + CSQ+C K + CSC G+ L+ D +C + + AF+I S R
Sbjct: 1214 SNKTCEVVDYCSRHLKCSQVCEQYKTTVKCSCYPGWTLDSDGDSCHSTDPFEAFIIFSIR 1273
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1274 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFSRSLLYWTDVVEDKIYRGRLSESGGVTGIE 1333
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGLA DWI G +YW+DS L++IEV NG R L + PR + LDP
Sbjct: 1334 VVVQHGLATPEGLAVDWITGKLYWIDSNLDQIEVAKLNGEMRTTLIAGGMEHPRAIALDP 1393
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIY--WPNGLTLDIATRRVYFADSK 258
G LFWTDW PRIE M G +R + WPNGLTLD +R+ + D++
Sbjct: 1394 GEGI--LFWTDWDATFPRIEAASMCGGDRHVVFKNMEIGAWPNGLTLDHLEKRIVWTDAR 1451
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--E 316
D IF LY DG ++ G Y
Sbjct: 1452 SD----------------AIFSALY------------------DGRGVIEILRGHEYLSH 1477
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ L G ++FWTDW N G N + I T
Sbjct: 1478 PFAVSLFGG-----------YVFWTDWRTNTLARANKWTGQNVTVIQKT 1515
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 148/310 (47%), Gaps = 53/310 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C++ K+C+G DC +G DEG C +L H+ C C T G C C G +
Sbjct: 89 KCIHFNKLCNGARDCEDGFDEGVHCRELLSACHEL-RCRYGCVMTRNGTFCFCADGFEVG 147
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN---HSAAFLI 119
D +C+D +EC G CSQ CTNT GSY CSC EGY+L+ D +CKA S L+
Sbjct: 148 EDGTSCRDHDECATYGACSQTCTNTYGSYRCSCTEGYILQPDGRSCKAKQDPGDSYPLLL 207
Query: 120 ISNRHSILVADLEEKG-------------------------------------------- 135
I I++ L G
Sbjct: 208 IGGPDRIVITHLNGTGLQPLRSLSAEGILALDFLHSQESVCWSLSTESSGQLRCAVTRNL 267
Query: 136 -KDHRAQDIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
+ R Q+I L VE +A DW+ G+ Y++D N+I CD G + + + ++
Sbjct: 268 RRFTREQEIRTQHSLQNVEQMAIDWLTGNYYFVDRVTNKIFACDRTGITCVTIVQLDLLN 327
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
P+G+ LDP G +F+TD+G +IER MDG+NR+ ++ +I P + LD+ + VY
Sbjct: 328 PKGLALDPVKGM--MFFTDYGNAAKIERCNMDGTNRTRLVDHRIEQPTAVALDVIKKLVY 385
Query: 254 FADSKLDFID 263
+AD+ LD+ID
Sbjct: 386 WADAYLDYID 395
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 141/294 (47%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC++ +CDGK DC +G+DE C++ EC + C+ C +G C C PG L
Sbjct: 2735 RCISEGNLCDGKDDCGDGSDE-RNCNVNECLNRRVSGCTQDCQDLTVGYKCKCWPGFHLK 2793
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY-VLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GS+ C C +GY L+ + +TCKA++ FLI++
Sbjct: 2794 DDGKTCVDIDECSTILPCSQRCINTYGSFRCLCVDGYEALDRNPNTCKAVSAEEPFLIMA 2853
Query: 122 NRHSIL---------------------------------VADLEEKGKDHRAQDIVVSGL 148
+ H I V G+ + S L
Sbjct: 2854 DHHEIRKLSVDGSNYTILKQGLYNIIHLDFDYKKEFIYWVDSTRPSGRKINRMRLNGSDL 2913
Query: 149 DLVE------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V LA DWIG ++YW D+ +EV NG +L + P + LDP
Sbjct: 2914 KIVHRTAVPSALAVDWIGKNLYWCDAEKKTLEVSKANGLYPTILISSGLKNPTDLTLDPQ 2973
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G ++FW D E P I R+GMDG ++ II T+IY P LT+D +R+Y+AD
Sbjct: 2974 TG--YVFWVDCCEPPHIGRVGMDGRGQTIIIDTEIYSPTALTIDYTNKRLYWAD 3025
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 152/398 (38%), Gaps = 80/398 (20%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---------- 126
G CSQ+C T + + CSC GY L D TC+ ++ +FL+ S I
Sbjct: 1848 GGCSQLCFPTSETTRSCSCTLGYNLRSDRTTCEGVD---SFLMYSIHEGIRGISLDPNDN 1904
Query: 127 ------LVADLEEKGKDHRA-------------------------QDIVVSGLDLVEGLA 155
+ L G D A +DI+ +G+ VEG+A
Sbjct: 1905 TEALMPITGTLFAVGVDFHAGNDTVYWTDMGLNRISRSKRDQTWREDIITTGISRVEGIA 1964
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G++YW D N IE+ NG R V+ + + QPR + + P G+ G
Sbjct: 1965 VDWIAGNLYWTDHGFNLIEISRLNGAYRSVVISEGLDQPRAIAVHPQKGS--------GL 2016
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNG------LTLDIATRRVYFADSKL--DFIDCKSL 267
++ + + + + NG L R A +L D C+
Sbjct: 2017 GVNLKDVTVFTGVEKKVSTNPCARSNGGCQQLCFHLGSGRRTCSCAHGRLADDGFACERY 2076
Query: 268 EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGK----------------ANMDGSNASILVS 311
E + TI + ++ DE P++ + N G+N
Sbjct: 2077 EGYLLYSERTILKSIHLSDESDLNAPVQPLENPAFFRNIIALTFDFGQNTAGTNRIFFSD 2136
Query: 312 GQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIY 368
+ + D + +FWT+W E P I R + G N +I + I
Sbjct: 2137 VHFGNIQVINDDWTGRSIIAEIYSYECLMFWTNWNEQRPSIMRSTLAGKNMKIVIGSDIL 2196
Query: 369 WPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
PNGLT+D ++YF+D L I+ C+YDG+ R ++
Sbjct: 2197 TPNGLTIDHKAEKLYFSDGSLSKIERCDYDGSSRHVIV 2234
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 132/329 (40%), Gaps = 74/329 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNT---------CHPTPLGALCT 54
RC+ + CD DC +G + C C+H +C C+ T + A+C
Sbjct: 3607 RCIPMQLQCDLFNDCGDGGSDEQDC--KSCEHGEHVCGKKTNPCGEDAICNQTNVNAVCQ 3664
Query: 55 CPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY--------------- 99
C PG + ++ C+++NEC Q C CTNTKGS+ C+C+ Y
Sbjct: 3665 CKPGFKRNQNTGLCEEINECVQFDTCPHYCTNTKGSFKCTCDRNYKEINGNCVAKGPDDR 3724
Query: 100 VLEYDNHT-----CKAINHSAAFLIIS--------------------------NRHSILV 128
VL N T NHS +++ N I
Sbjct: 3725 VLYIANDTEIRSFVFPYNHSQGHKMLTHIEDNARIIGMDVLFHHQKFIWATQFNPGGIFY 3784
Query: 129 ADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD-SRLN--------------RI 173
D E+ + + + S ++ DWI G+IYW D SR++ I
Sbjct: 3785 RDSLERSQTKSSIRNICSDFRRPRDISADWITGNIYWTDHSRMHWFSYYTAHWTKLRYSI 3844
Query: 174 EVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
V G N L D +P + ++P+ G ++W+ ++ IE MDGS R ++
Sbjct: 3845 NVGQLKGPNCTRLITDIAGEPYAITVNPARGM--MYWSVIADHSHIEESAMDGSLRRVLL 3902
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GLT+D +R+Y+AD +L I
Sbjct: 3903 EKNLRRPTGLTIDYFNQRIYWADPELSLI 3931
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 108/247 (43%), Gaps = 55/247 (22%)
Query: 70 DMNECEQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL 127
+M+ +PG CS +C S C C GY L YD +CK R ++
Sbjct: 483 EMDRYGKPGGCSHICLLNGNYKSRTCRCRTGYSLGYDGKSCKKPKSDFFLFYGKGRPGVI 542
Query: 128 VA-DLEEKGKDH-----------RAQD------------------------------IVV 145
D+ K D RA D I+
Sbjct: 543 RGLDMNIKSSDEHMEPIEDLVNPRAIDYHVETGYVYFADTTSFLIGRQKIDGSGRETILK 602
Query: 146 SGLDLVEGLAYDWIGGHIYWL-DSRLNRIEVCD-ENGTN-RIVLAKDNITQPRGMMLDPS 202
LD VEG++ DWIG ++YW D I V EN + R L + N++ PR +++DP
Sbjct: 603 DELDNVEGISVDWIGNNLYWTNDGYRKTISVARLENASQTRKTLLEGNMSHPRAIVVDPL 662
Query: 203 PGTRWLFWTDWGENP------RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
W++WTDW E+ RIE+ MDGSNR +++ + WPNGLTLD +T +++ D
Sbjct: 663 --NSWMYWTDWEEDEVNDSIGRIEKAWMDGSNRGIFVTSNMLWPNGLTLDHSTSTMFWCD 720
Query: 257 SKLDFID 263
+ D I+
Sbjct: 721 AYYDHIE 727
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 30/206 (14%)
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS-----------KLDFI 262
++ I ++ +DGSN TI+ +Y L D +Y+ DS +L+
Sbjct: 2853 ADHHEIRKLSVDGSNY-TILKQGLYNIIHLDFDYKKEFIYWVDSTRPSGRKINRMRLNGS 2911
Query: 263 DCKSLE---IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D K + + + + I + LYW D L++ KAN G +IL+S L
Sbjct: 2912 DLKIVHRTAVPSALAVDWIGKNLYWCD--AEKKTLEVSKAN--GLYPTILISSGLKNPTD 2967
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L L+ T ++FW D E P I R+GMDG ++ II T+IY P LT+D
Sbjct: 2968 LTLDPQ---------TGYVFWVDCCEPPHIGRVGMDGRGQTIIIDTEIYSPTALTIDYTN 3018
Query: 380 RRVYFADSKLDFIDFCNYDGTGRQQV 405
+R+Y+AD + I F N DGT R +V
Sbjct: 3019 KRLYWADD--NHILFANMDGTQRHKV 3042
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 11/90 (12%)
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
+ LALD GM+ F+TD+G +IER MDG+NR+ ++ +I P + L
Sbjct: 329 KGLALDPVKGMM-----------FFTDYGNAAKIERCNMDGTNRTRLVDHRIEQPTAVAL 377
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
D+ + VY+AD+ LD+ID +Y G R +
Sbjct: 378 DVIKKLVYWADAYLDYIDVVDYQGKNRHTI 407
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 117/288 (40%), Gaps = 47/288 (16%)
Query: 69 QDMNECEQ---PGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
Q N C++ G CS +C N + C+C L D +C + FL+ R
Sbjct: 1532 QASNPCKENDGRGPCSHLCLINYNHTASCTCPHLMKLSADKQSCSVLKR---FLLYVRRS 1588
Query: 125 SILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
I D++ + + V +D V + YD IYW D + I+ NGT
Sbjct: 1589 EIRGVDMDNPYMNVMTA-LTVPDIDDVSVVDYDAQEERIYWADVKTQTIKRAFINGTQLE 1647
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTII---------- 233
+ +I G+ LD ++ L+W + + +I DGS +++II
Sbjct: 1648 TIISSDIVNC-GLALDWI--SKNLYWLSSENDESQINVARFDGSLQTSIIHGIDKPRCLV 1704
Query: 234 ----STKIYWPNGLTLDIA-----TRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYW 284
KI+W +G T+++A +V + K D L I N KLYW
Sbjct: 1705 VHPAKGKIFWTDGSTINMANMDGSNSKVLHQNQK----DPVGLSIDHPAN------KLYW 1754
Query: 285 IDEGGNGVPLKIGKANMDGSNASIL--VSGQLYEALALDLENGMLYYS 330
I N I + N+DGS +L + +L + AL + G L+++
Sbjct: 1755 ISSANN----TINRCNLDGSGLEVLETLKRKLSKGTALAVMGGKLWWA 1798
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 125/318 (39%), Gaps = 55/318 (17%)
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
D Q ++ G+D L G I+W D + I + + +G+N VL + N P G
Sbjct: 1686 DGSLQTSIIHGIDKPRCLVVHPAKGKIFWTDG--STINMANMDGSNSKVLHQ-NQKDPVG 1742
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ +D P + L+W N I R +DGS + + K G L + ++++AD
Sbjct: 1743 LSID-HPANK-LYWISSANNT-INRCNLDGSGLEVLETLKRKLSKGTALAVMGGKLWWAD 1799
Query: 257 ---------SKLDFIDCKSLEIKT-NVNYSTIF-------RKLYWIDEGGN--------- 290
+K D + L KT V + ++ + + ++ GG
Sbjct: 1800 DESGQLGTVTKKDGRNFLPLRNKTGGVVHMKVYDREGQKGKNMCQVNNGGCSQLCFPTSE 1859
Query: 291 ---------GVPLKIGKANMDGSNASILVS-GQLYEALALDLENGMLYYSTLKCTRW--- 337
G L+ + +G ++ ++ S + ++LD + + T +
Sbjct: 1860 TTRSCSCTLGYNLRSDRTTCEGVDSFLMYSIHEGIRGISLDPNDNTEALMPITGTLFAVG 1919
Query: 338 ---------LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 388
++WTD G N RI R D + R II+T I G+ +D +Y+ D
Sbjct: 1920 VDFHAGNDTVYWTDMGLN-RISRSKRDQTWREDIITTGISRVEGIAVDWIAGNLYWTDHG 1978
Query: 389 LDFIDFCNYDGTGRQQVI 406
+ I+ +G R VI
Sbjct: 1979 FNLIEISRLNGAYRSVVI 1996
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 33/201 (16%)
Query: 218 RIERIGMDGSNRSTIISTKIYWPN-----GLTLDIATRRVYFADSKLD-----FIDCKSL 267
R E G+D N + T + P+ + D R+Y+AD K FI+ L
Sbjct: 1587 RSEIRGVDMDNPYMNVMTALTVPDIDDVSVVDYDAQEERIYWADVKTQTIKRAFINGTQL 1646
Query: 268 E-------IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
E + + I + LYW+ + + + A DGS + ++ G +
Sbjct: 1647 ETIISSDIVNCGLALDWISKNLYWLSSENDESQINV--ARFDGSLQTSIIHG-------I 1697
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
D ++ + +FWTD I MDGSN S ++ P GL++D
Sbjct: 1698 DKPRCLVVHPA---KGKIFWTD---GSTINMANMDGSN-SKVLHQNQKDPVGLSIDHPAN 1750
Query: 381 RVYFADSKLDFIDFCNYDGTG 401
++Y+ S + I+ CN DG+G
Sbjct: 1751 KLYWISSANNTINRCNLDGSG 1771
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 12/124 (9%)
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDEN 179
R SI+ + L GK+ + +V G D++ GL D +Y+ D L++IE CD +
Sbjct: 2173 QRPSIMRSTL--AGKNMK----IVIGSDILTPNGLTIDHKAEKLYFSDGSLSKIERCDYD 2226
Query: 180 GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYW 239
G++R V+ K G+ + +++W+DW + G + + + +
Sbjct: 2227 GSSRHVIVKSGAGNFYGLAIYGD----FVYWSDWTRRAVLRSNKYTGGDTKVLRADMPHQ 2282
Query: 240 PNGL 243
P G+
Sbjct: 2283 PMGI 2286
>gi|326327826|pdb|3M0C|C Chain C, The X-Ray Crystal Structure Of Pcsk9 In Complex With The
Ldl Receptor
Length = 791
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 153/301 (50%), Gaps = 47/301 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 286 CITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVA 345
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
C+D++EC+ P CSQ+C N +G Y C C EG+ L+ CKA+ S A+L +NR
Sbjct: 346 QR-RCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG-SIAYLFFTNR 403
Query: 124 HSI------------LVADLE-----------------------------EKGKDHRAQD 142
H + L+ +L ++ + D
Sbjct: 404 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD 463
Query: 143 IVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
V+S + +GLA DWI +IYW DS L + V D G R L ++N ++PR +++DP
Sbjct: 464 TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDP 523
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL
Sbjct: 524 VHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 581
Query: 262 I 262
I
Sbjct: 582 I 582
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLD 200
+V + G+ D + G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 552 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF 611
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 612 EDK----VFWTD 619
>gi|74205242|dbj|BAE23143.1| unnamed protein product [Mus musculus]
Length = 721
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 169/362 (46%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVCD + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 289 ECIDMSKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 348
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 349 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 405
Query: 122 NRHSILVADLEEKG-------------------------KDHRAQDIVVSGLDLVEG--- 153
NR I LE K D + I + +D G
Sbjct: 406 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHF 465
Query: 154 -----------LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+A DW+ IYW D+ I V +G R L ++ +P + +DP
Sbjct: 466 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGAKRKFLFNSDLREPASIAVDPL 525
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 526 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLYWLDSKLHML 583
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 584 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 640
Query: 310 VS 311
V+
Sbjct: 641 VN 642
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 32/204 (15%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
I +IG++ ++ ++ L DIA +++++AD I S++ K ++ I
Sbjct: 410 IRKIGLERKEYIQLVE-QLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHFKMI 468
Query: 279 --------------FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDL 322
++ +YW D + + A +DG+ L + L E ++A+D
Sbjct: 469 DNVYNPAAIAVDWVYKTIYWTDAASKTISV----ATLDGAKRKFLFNSDLREPASIAVDP 524
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+G +Y W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+
Sbjct: 525 LSGFVY-----------WSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRL 573
Query: 383 YFADSKLDFIDFCNYDGTGRQQVI 406
Y+ DSKL + + +G R+ V+
Sbjct: 574 YWLDSKLHMLSSVDLNGQDRRIVL 597
>gi|348505126|ref|XP_003440112.1| PREDICTED: very low-density lipoprotein receptor [Oreochromis
niloticus]
Length = 844
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 145/301 (48%), Gaps = 46/301 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ ++KVC+ DCP+ +DE C+ EC G CS+ C +G C C PG L
Sbjct: 327 ECIEMSKVCNKVRDCPDWSDEPIKECNFNECLLNNGGCSHICKDMVIGYECDCTPGLQLI 386
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC PG CSQ+C N KG Y C C+ GY ++ CKA+ LI +N
Sbjct: 387 -DHKTCGDIDECMNPGICSQICINLKGGYKCECHNGYQMDPTTGVCKAVGKEPC-LIFTN 444
Query: 123 RHSILVADLEEK---------------GKDHRAQDI------------------------ 143
R I LE K D Q I
Sbjct: 445 RRDIRRLGLERKEYTQIVEQQRNAVALDADFDQQTIFWADLGQKAIYSTLLDKRVDVGTH 504
Query: 144 --VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
V+ + G+A DWI ++YW D I V NGT + VL + +P + +DP
Sbjct: 505 KKVIDNVQTPVGIAVDWIYKNLYWSDLGTKTISVASFNGTKQKVLFNRGLKEPADIAVDP 564
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+W+DWGE +IE+ GM+G +R +++T I WPNG+TLD+ R+Y+ DSKL
Sbjct: 565 LSG--FLYWSDWGEPAKIEKSGMNGVDRQVLVATDIQWPNGITLDLIKGRLYWVDSKLHM 622
Query: 262 I 262
+
Sbjct: 623 L 623
>gi|332831717|ref|XP_003312082.1| PREDICTED: very low-density lipoprotein receptor isoform 1 [Pan
troglodytes]
gi|410213730|gb|JAA04084.1| very low density lipoprotein receptor [Pan troglodytes]
gi|410335617|gb|JAA36755.1| very low density lipoprotein receptor [Pan troglodytes]
Length = 845
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 172/362 (47%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQ------------------DIVVSGL 148
NR I LE K D AQ D V +
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHI 506
Query: 149 DLVE------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+++ +A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 290 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 350 EPLKECHINECLVNN-------------GGCSHICKDLVIGYECDCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCKA-VGKEPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHIKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 534 SKTISV----ATLDGTKRKFLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|380786359|gb|AFE65055.1| very low-density lipoprotein receptor isoform b precursor [Macaca
mulatta]
Length = 845
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 171/362 (47%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQDIV---------------------V 145
NR I LE K D AQ + V
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 506
Query: 146 SGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+D V +A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 290 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 350 EPLKECHINECLVNN-------------GGCSHICKDLVIGYECDCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCKA-VGKEPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 534 SKTISV----ATLDGTKRKFLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|332831719|ref|XP_520460.3| PREDICTED: very low-density lipoprotein receptor isoform 4 [Pan
troglodytes]
gi|410213732|gb|JAA04085.1| very low density lipoprotein receptor [Pan troglodytes]
gi|410254754|gb|JAA15344.1| very low density lipoprotein receptor [Pan troglodytes]
gi|410297354|gb|JAA27277.1| very low density lipoprotein receptor [Pan troglodytes]
gi|410335619|gb|JAA36756.1| very low density lipoprotein receptor [Pan troglodytes]
Length = 873
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 172/362 (47%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQ------------------DIVVSGL 148
NR I LE K D AQ D V +
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHI 506
Query: 149 DLVE------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+++ +A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 290 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 350 EPLKECHINECLVNN-------------GGCSHICKDLVIGYECDCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCKA-VGKEPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHIKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 534 SKTISV----ATLDGTKRKFLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|355567799|gb|EHH24140.1| Very low-density lipoprotein receptor, partial [Macaca mulatta]
gi|355753382|gb|EHH57428.1| Very low-density lipoprotein receptor, partial [Macaca
fascicularis]
Length = 840
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 171/362 (47%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 297 ECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 356
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 357 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 413
Query: 122 NRHSILVADLEEK---------------GKDHRAQDIV---------------------V 145
NR I LE K D AQ + V
Sbjct: 414 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 473
Query: 146 SGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+D V +A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 474 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 533
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 534 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHML 591
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 592 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 648
Query: 310 VS 311
V+
Sbjct: 649 VN 650
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 257 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSD 316
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 317 EPLKECHINECLVNN-------------GGCSHICKDLVIGYECDCAAGFEL-IDRKTCG 362
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 363 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCKA-VGKEPSLIFTN 414
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 415 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 470
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 471 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 500
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 501 SKTISV----ATLDGTKRKFLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 545
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 546 AKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 605
>gi|426361178|ref|XP_004047799.1| PREDICTED: very low-density lipoprotein receptor isoform 1 [Gorilla
gorilla gorilla]
Length = 845
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 171/362 (47%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQDIV---------------------V 145
NR I LE K D AQ + V
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 506
Query: 146 SGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+D V +A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 290 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 350 EPLKECHINECLVNN-------------GGCSHICKDLVIGYECDCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCKA-VGKEPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 534 SKTISV----ATLDGTKRKFLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|426228997|ref|XP_004008580.1| PREDICTED: low-density lipoprotein receptor [Ovis aries]
Length = 845
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 154/302 (50%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L KVC+ DC + +DE C EC CS+ C+ +G C CP G L
Sbjct: 290 ECISLDKVCNSIRDCRDWSDEPLKDCGTNECLDNKSGCSHICNDLKIGYECLCPEGFQLV 349
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC+ P CSQ+C N +GSY C C EG+ LE CKA+ + A+L +N
Sbjct: 350 -DKHRCEDIDECQNPDTCSQLCVNLEGSYKCECEEGFRLEPLTKACKAVG-TIAYLFFTN 407
Query: 123 RHSI------------LVADLE-------------------EKGKDHRAQ---------- 141
RH + L+ +L+ + K + AQ
Sbjct: 408 RHEVRKMTLDRSEYTSLIPNLKNVVALDTEVASNRIYWSDLSQRKIYSAQIDDAPGFSSY 467
Query: 142 -DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++ L +GLA DWI +IYW DS L + V D G R L ++ ++PR +++D
Sbjct: 468 DTVIGENLQAPDGLAVDWIHSNIYWTDSILGTVSVADTKGVKRKTLFQEEGSKPRAIVVD 527
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG I++ G++G + ++++ I WPNG+TLD++ R+Y+ DSKL
Sbjct: 528 PVHG--FMYWTDWGTPAEIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLH 585
Query: 261 FI 262
I
Sbjct: 586 SI 587
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD--NITQPRGMMLD 200
+V + G+ D GG +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 557 LVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSIDVNGGNRKTVLEDKKKLAHPFSLAIF 616
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 617 EDK----VFWTD 624
>gi|1083645|pir||S53457 dominant autoantigen gp 330 - rat (fragment)
gi|998942|gb|AAB33315.1| Heymann nephritis autoantigen gp330 {C-terminal} [rats, kidney,
Peptide Partial, 1650 aa]
Length = 1650
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 183/411 (44%), Gaps = 98/411 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + +VC+ DC + +DE GC + EC C + C T C+C PG L
Sbjct: 83 HCIEMGRVCNHVDDCSDNSDEK-GCGINECLDSSISRCDHNCTDTITSFYCSCLPGYKLM 141
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D +C D++EC E P CSQ C N GSYIC C GY+ E D +C+ ++ +LI S
Sbjct: 142 SDKRSCVDIDECKESPQLCSQKCENVVGSYICKCAPGYIREPDGKSCRQNSNIEPYLIFS 201
Query: 122 NRHSI-------------------LVA-------------DLEEK-------GKDHRAQD 142
NR+ I +VA D E++ K +R +
Sbjct: 202 NRYYIRNLTTDGSSYSLILQGLGNVVALDFDRVEKRLYWIDAEKQIIERMFLNKTNR-ET 260
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQP 194
I+ L E L DW+ +YWLD+ L+ + V D G +R ++A+ + P
Sbjct: 261 IINHRLRRAESLDVDWVSTKLYWLDAILDCLFVSDLEGRHRKMIAQHCVDANNTFCFEHP 320
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
RG++L P G ++WTDWG + I RIGMDG+N+S IISTKI WPN +T+D +Y+
Sbjct: 321 RGIVLHPQRGH--VYWTDWGVHAYIGRIGMDGTNKSVIISTKIEWPNAITIDYTNDLLYW 378
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
AD+ L +I+ LE G + + G L
Sbjct: 379 ADAHLGYIEFSDLE----------------------------------GHHRHTVYDGSL 404
Query: 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
AL ++ T +FWTDW + DGS R +++T
Sbjct: 405 PHPFAL-----TIFEDT------VFWTDWNTRTVEKGNKYDGSGRVVLVNT 444
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 156/367 (42%), Gaps = 78/367 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGA-LCTCPPG-EIL 61
C++ VCD DC + +DE GC+L + + +C C G +C+C PG +
Sbjct: 941 CISQHYVCDNVNDCGDLSDET-GCNLGDNRTCAENICEQNCTQLSSGGFICSCRPGFKPS 999
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY--VLEYDNHTCKAINHSAAFLI 119
++D +CQD+NECE+ G C Q C N+KGSY C C +G+ + + C A L+
Sbjct: 1000 TSDKNSCQDINECEEFGICPQSCRNSKGSYECFCVDGFKSMSTHYGERCAADGSPPLLLL 1059
Query: 120 ISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHI-----YWL-------- 166
N EK ++ ++ + +D YDW HI Y+
Sbjct: 1060 PENVRIRKYNTSSEKFSEYLEEEEHIQTID------YDWDPEHIGLSVVYYTVLAQGSQF 1113
Query: 167 ----DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD---------- 212
+ + E N + L + QP G+ +D R ++W+D
Sbjct: 1114 GAIKRAYIPNFESGSNNPIREVDLGLKYLMQPDGLAVDWV--GRHIYWSDAKSQRIEVAT 1171
Query: 213 -------W-----------------GENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-I 247
W G+ P+IE M+G +RS ++S + WPNGL++D +
Sbjct: 1172 LDGRYRNWLITTQLDQPRSYVLDDQGKQPKIESAWMNGEHRSVLVSENLGWPNGLSIDYL 1231
Query: 248 ATRRVYFADSKLDFIDC-------KSLEIKTNVNYST--IFR-KLYWI--DEGGNGVPLK 295
RVY++DSK D I+ + L I + + IF KLYW+ ++G K
Sbjct: 1232 NDDRVYWSDSKEDVIEAIKYDGTDRRLIINEAMKPFSLDIFEDKLYWVAKEKGEVWRQNK 1291
Query: 296 IGKANMD 302
GK N +
Sbjct: 1292 FGKENKE 1298
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 24/145 (16%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRW 337
+ R +YW D +I A +DG + L++ QL + + L+
Sbjct: 1153 VGRHIYWSDAKSQ----RIEVATLDGRYRNWLITTQLDQPRSYVLD-------------- 1194
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDFCN 396
D G+ P+IE M+G +RS ++S + WPNGL++D + RVY++DSK D I+
Sbjct: 1195 ----DQGKQPKIESAWMNGEHRSVLVSENLGWPNGLSIDYLNDDRVYWSDSKEDVIEAIK 1250
Query: 397 YDGTGRQQVILIDLMVEFTNDLMGD 421
YDGT R ++I+ + M F+ D+ D
Sbjct: 1251 YDGTDR-RLIINEAMKPFSLDIFED 1274
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 25/182 (13%)
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
D KS +N+ IF Y+I DGS+ S+++ G L +ALD
Sbjct: 184 DGKSCRQNSNIEPYLIFSNRYYI-----------RNLTTDGSSYSLILQG-LGNVVALDF 231
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+ + + L+W D E IER+ ++ +NR TII+ ++ L +D + ++
Sbjct: 232 D---------RVEKRLYWID-AEKQIIERMFLNKTNRETIINHRLRRAESLDVDWVSTKL 281
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
Y+ D+ LD + D GR + ++ V+ N ++ + L + G +Y++ G
Sbjct: 282 YWLDAILDCLFV--SDLEGRHRKMIAQHCVDANNTFCFEHPR-GIVLHPQRGHVYWTDWG 338
Query: 443 AE 444
Sbjct: 339 VH 340
>gi|397505726|ref|XP_003823401.1| PREDICTED: very low-density lipoprotein receptor isoform 2 [Pan
paniscus]
Length = 845
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 172/362 (47%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQ------------------DIVVSGL 148
NR I LE K D AQ D V +
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 506
Query: 149 DLVE------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+++ +A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 290 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 350 EPLKECHINECLVNN-------------GGCSHICKDLVIGYECDCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCKA-VGKEPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 534 SKTISV----ATLDGTKRKFLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|437387|gb|AAA61344.1| very low density lipoprotein receptor [Homo sapiens]
Length = 873
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 172/362 (47%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQ------------------DIVVSGL 148
NR I LE K D AQ D V +
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 506
Query: 149 DLVE------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+++ +A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 290 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 350 EPLKECHINECLVNN-------------GGCSHICKDLVIGYECDCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCKA-VGKEPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 534 SKTISV----ATLDGTKRKFLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|380786209|gb|AFE64980.1| very low-density lipoprotein receptor isoform a precursor [Macaca
mulatta]
Length = 873
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 171/362 (47%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQDIV---------------------V 145
NR I LE K D AQ + V
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 506
Query: 146 SGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+D V +A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 290 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 350 EPLKECHINECLVNN-------------GGCSHICKDLVIGYECDCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCKA-VGKEPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 534 SKTISV----ATLDGTKRKFLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|65301167|ref|NP_003374.3| very low-density lipoprotein receptor isoform a precursor [Homo
sapiens]
gi|1730111|sp|P98155.1|VLDLR_HUMAN RecName: Full=Very low-density lipoprotein receptor; Short=VLDL
receptor; Short=VLDL-R; Flags: Precursor
gi|391734|dbj|BAA03945.1| very low density lipoprotein receptor [Homo sapiens]
gi|407221|dbj|BAA03969.1| very low density lipoprotein receptor [Homo sapiens]
gi|688371|gb|AAB31735.1| very low density lipoprotein receptor [Homo sapiens]
gi|66394594|gb|AAY46157.1| very low density lipoprotein receptor [Homo sapiens]
gi|119579209|gb|EAW58805.1| very low density lipoprotein receptor, isoform CRA_b [Homo sapiens]
gi|119579210|gb|EAW58806.1| very low density lipoprotein receptor, isoform CRA_b [Homo sapiens]
gi|187950383|gb|AAI36563.1| Very low density lipoprotein receptor [Homo sapiens]
Length = 873
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 171/362 (47%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQDIV---------------------V 145
NR I LE K D AQ + V
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 506
Query: 146 SGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+D V +A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 290 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 350 EPLKECHINECLVNN-------------GGCSHICKDLVIGYECDCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCKA-VGKEPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 534 SKTISV----ATLDGTKRKFLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|397505724|ref|XP_003823400.1| PREDICTED: very low-density lipoprotein receptor isoform 1 [Pan
paniscus]
Length = 873
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 171/362 (47%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQDIV---------------------V 145
NR I LE K D AQ + V
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 506
Query: 146 SGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+D V +A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 290 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 350 EPLKECHINECLVNN-------------GGCSHICKDLVIGYECDCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCKA-VGKEPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 534 SKTISV----ATLDGTKRKFLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|297684503|ref|XP_002819869.1| PREDICTED: very low-density lipoprotein receptor isoform 1 [Pongo
abelii]
Length = 873
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 171/362 (47%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQDIV---------------------V 145
NR I LE K D AQ + V
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASVDDKVGRHV 506
Query: 146 SGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+D V +A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 290 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 350 EPLKECHINECLVNN-------------GGCSHICKDLVIGYECDCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCKA-VGKEPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASVDDKVG 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 534 SKTISV----ATLDGTKRKFLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|426361180|ref|XP_004047800.1| PREDICTED: very low-density lipoprotein receptor isoform 2 [Gorilla
gorilla gorilla]
Length = 873
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 171/362 (47%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQDIV---------------------V 145
NR I LE K D AQ + V
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 506
Query: 146 SGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+D V +A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 290 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 350 EPLKECHINECLVNN-------------GGCSHICKDLVIGYECDCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCKA-VGKEPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 534 SKTISV----ATLDGTKRKFLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|65301164|ref|NP_001018066.1| very low-density lipoprotein receptor isoform b precursor [Homo
sapiens]
gi|391736|dbj|BAA03946.1| very low density lipoprotein receptor [Homo sapiens]
gi|119579208|gb|EAW58804.1| very low density lipoprotein receptor, isoform CRA_a [Homo sapiens]
gi|119579211|gb|EAW58807.1| very low density lipoprotein receptor, isoform CRA_a [Homo sapiens]
gi|148744344|gb|AAI42654.1| Very low density lipoprotein receptor [Homo sapiens]
gi|219521548|gb|AAI44246.1| Very low density lipoprotein receptor [Homo sapiens]
gi|307685575|dbj|BAJ20718.1| very low density lipoprotein receptor [synthetic construct]
Length = 845
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 172/362 (47%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQ------------------DIVVSGL 148
NR I LE K D AQ D V +
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 506
Query: 149 DLVE------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+++ +A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 290 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 350 EPLKECHINECLVNN-------------GGCSHICKDLVIGYECDCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCKA-VGKEPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 534 SKTISV----ATLDGTKRKFLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|195392674|ref|XP_002054982.1| GJ19044 [Drosophila virilis]
gi|194149492|gb|EDW65183.1| GJ19044 [Drosophila virilis]
Length = 1964
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 154/309 (49%), Gaps = 53/309 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLA-ECKHKFGLCSNTCHPTPL-GALCTCPPGEILS 62
C+ L++VCDG+ +C +G+DE C +C K +CH P GA C CP G L
Sbjct: 240 CLPLSQVCDGQPNCSDGSDESESCRAKPDCSTKQCPPGASCHMMPASGAECFCPDGFRLL 299
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEY-DNHTCKAIN----HSAA 116
C+D+NEC E+ CSQ C NT G Y C+C+ GY L+ +N TC A++ +A
Sbjct: 300 KFKDKCEDINECQERDDLCSQRCENTSGGYRCACDAGYELDASNNRTCHALDIGSGKQSA 359
Query: 117 FLIISNRHSILVADLEEKGK----------------------DH---------------- 138
L+ + + +++ L+++ DH
Sbjct: 360 LLLYTTQVTVMGMHLKQQTHQRNHVFSVATNLSKVIGVAFDGDHIYWTNIQNEAESIVRA 419
Query: 139 -----RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
A+ ++ SGLD E LA DW+ +IY+ D+ + I VC +G + +VL ++ Q
Sbjct: 420 RADGSMAEILLTSGLDAPEDLAVDWLTHNIYFSDNIMRHIAVCSNDGLSCVVLVTQDVHQ 479
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
PR + L P G +FWTDWG P I R MDG+ I++ I+WPNG+ LD+ R+Y
Sbjct: 480 PRSLALWPQRGQ--MFWTDWGNKPMIARASMDGTRSQPIVADNIHWPNGIALDMHQERIY 537
Query: 254 FADSKLDFI 262
+ D+KL +
Sbjct: 538 WVDAKLGSV 546
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 147/360 (40%), Gaps = 54/360 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV+++ VC+G DC NG DEGP C A K LC + C TP GA+CTC G L++D
Sbjct: 1333 CVDMSHVCNGFADCTNGNDEGPQCTSACSK---PLCQHRCQATPAGAVCTCLDGYRLASD 1389
Query: 65 SVTCQDMNECEQPGY---CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+C D++EC P C+Q+C NT GSY C C+ ++L D +CK+I A L S
Sbjct: 1390 QRSCVDIDECAVPAEQQPCAQLCENTPGSYQCQCHADFMLSQDRSSCKSIQSGAPLLFTS 1449
Query: 122 -NRHSILVADLEEKGKDHRAQDIVVSGLDL------------------------------ 150
N L A A D +SG D+
Sbjct: 1450 YNEVRNLSAHPVTLSVAWSANDTAISGFDVDMRRQLGYFSSEEQNIIYRVNLRDRSQMTA 1509
Query: 151 -----VEGLAYDWIGGHIYWLDSRL-NRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSP 203
+A +W G++Y + R +I VC+ E +L + + + +D
Sbjct: 1510 LALRSPSKMAVEWTTGNVYVISGRTPQQISVCNFEAKMCGSILQMLSRFSLKALAVDAHK 1569
Query: 204 GTRWLFWTDWGEN-----PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD-- 256
R + E+ ++ +DGS R ++ + + + D + +YF D
Sbjct: 1570 A-RLFYVAIRSESFGQPITQLHMARLDGSRRELLLRKQRSYVTAIATDPHQQLLYFVDLH 1628
Query: 257 -SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
L+ I K + +K + + G+ + +A++ A VS QLY
Sbjct: 1629 SHTLEMISYKGRGSGKQREAHVLLQKSNALLQ-PTGLSIYENQAHIVNMGAKEAVSCQLY 1687
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 130/359 (36%), Gaps = 93/359 (25%)
Query: 80 CSQMCTNTK---GSYICSCNEGYVLEYDNHTCKAINHSAAFLI----------------- 119
CS +C + G Y C+C EG L D H C I
Sbjct: 630 CSHLCLLAEPDAGGYSCACPEGMTLSPDGHRCSQTEKKQRLFIGLRQVLLEIEHTSFGRH 689
Query: 120 -ISNRHS----------------ILVADLEEKG--------KDHRAQDIVVSGLDLVEGL 154
+S H+ + +AD ++ + R +V L + L
Sbjct: 690 VVSASHTLPCRISELAYNSINSTVFIADNMQRAIFEYAPHPSEQRLTMLVSRNLGNISSL 749
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL---AKDNITQPRGMMLDPSPGTRWLFWT 211
A+D + ++YW D + IE+ +R ++ A D + P G+ + P+ G ++
Sbjct: 750 AFDHLAHNLYWADMERHVIELLSLRTGHRALVRFFAGDEL--PIGLSVMPAEGYMFVALK 807
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
+ I+R+ + G T V+ D D +IK
Sbjct: 808 AR-RHTHIDRVALSGRGAQT-------------------HVFEEDLGDD-------DIKF 840
Query: 272 NVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYST 331
V+Y T +YW D + ++ +N ++A + G+ AL L N L++S
Sbjct: 841 AVDYET--HTMYWSDSDTS----RLSFSNYRQTHAQMF-RGKFRRPYALALVNQDLFWSE 893
Query: 332 LKCTRWLFWT---DWGENPRIE-----RIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
L T ++WT + G N RIE +G+DG + + P + L + R V
Sbjct: 894 LG-TPAIYWTHKSNMGPNKRIEIETNPHLGLDGDAATAATYLHLTLPVRIPLTASGRVV 951
>gi|355728401|gb|AES09518.1| Very low-density lipoprotein receptor precursor [Mustela putorius
furo]
Length = 493
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 115/361 (31%), Positives = 167/361 (46%), Gaps = 60/361 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+++++VC+ + DC + +DE C + EC G CS+ C +G C C G L
Sbjct: 73 ECIDISQVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFELI 132
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +N
Sbjct: 133 -DKKICGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFTN 190
Query: 123 RHSILVADLEEK---------------GKDHRAQDIV---------------------VS 146
R I LE K D AQ + V
Sbjct: 191 RRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHVK 250
Query: 147 GLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+D V +A DW+ IYW D I V +GT R L ++ +P + LDP
Sbjct: 251 MIDNVYNPAAIAVDWVYKTIYWTDVASKTISVATLDGTKRKFLFNSDLREPASLALDPLS 310
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 311 G--FVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHMLS 368
Query: 264 C------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASILV 310
KSLE + TIF ++YWID V G GS + LV
Sbjct: 369 SVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATLV 425
Query: 311 S 311
+
Sbjct: 426 N 426
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 162/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 33 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISQVCNQEQDCRDWSD 92
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D C
Sbjct: 93 EPLKECHVNECLVNN-------------GGCSHICKDLVIGYECDCAAGFEL-IDKKICG 138
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 139 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVC-KAVGKEPSLIFTN 190
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 191 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 246
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 247 RHVKMIDNVYNPAAIAVD------------------------------WVYKTIYWTDVA 276
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E +LALD +G +Y W+DWGE
Sbjct: 277 SKTISV----ATLDGTKRKFLFNSDLREPASLALDPLSGFVY-----------WSDWGEP 321
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 322 AKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 381
>gi|110190113|gb|AAZ31260.3| vitellogenin receptor [Dermacentor variabilis]
Length = 1798
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 111/308 (36%), Positives = 160/308 (51%), Gaps = 47/308 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C+ +KVCDG+ DC +GADEG C + EC K CS C G+ C C G L
Sbjct: 165 QCLLPSKVCDGRKDCGDGADEGAFCKVNECSQK--KCSQGCFVATNGSTCYCNTGFRLMA 222
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL---- 118
D ++C D++EC E+P CS CTN+ GSY C C EGY L D CKA + L
Sbjct: 223 DHISCADVDECAEEPYVCSHGCTNSPGSYSCHCLEGYQLA-DKSFCKARDPEPLLLYSNT 281
Query: 119 -------IISNRH-SILVADLEEKG----KDHR---------------AQDIVVSGLD-- 149
+ SNR+ I A+ + G D R ++ + SGL
Sbjct: 282 KEIRGLWLRSNRYFEIHPAEAQAVGVEFDSDQRRVYWTDVSTLKSSVYSRRLDGSGLKTL 341
Query: 150 ------LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
L+E L+ DW+ ++Y DS + RI VC +G + L D+I PR ++++P+
Sbjct: 342 FSAEKTLLEDLSLDWVTNNLYITDSLVKRILVCTTDGLSCSALITDSIDSPRAIIVNPAQ 401
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
T ++WTDWG P + MDG+N + ++ST + WPNGLTLD T R+Y+ D+KL ++
Sbjct: 402 KT--MYWTDWGAQPAVMHSNMDGTNVAQLVSTDLGWPNGLTLDHTTNRLYWCDAKLSRLE 459
Query: 264 CKSLEIKT 271
LE+ T
Sbjct: 460 --YLELST 465
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 171/400 (42%), Gaps = 93/400 (23%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
+ C+ T VCDG+TDC + +DEG C + C G C++ C +P G +C+C PG L
Sbjct: 1192 SHECIAWTSVCDGRTDCADFSDEGSHC-VKHCGTANGGCAHICRESPSGPICSCQPGYRL 1250
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII- 120
++D +C D++EC PG+CS C N+KG + C+C +GY L D CK + + AFL+
Sbjct: 1251 NSDHKSCDDVDECATPGHCSHFCQNSKGGFKCTCADGYALGVDRRYCK-VQYGEAFLLYM 1309
Query: 121 -----------SNRHSILVAD--LEEKGKDHRAQDIVVSGLDLVEG-------------- 153
+ +L D + G D+R D + ++ EG
Sbjct: 1310 LPNQIRSFSMHGHAQHLLAEDSLSDMHGMDYRVADKSIFWTEMDEGIINVMTVGNGKQFT 1369
Query: 154 ----------LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+A DW+ G+IY+ D ++ I+ C+ + + + L +
Sbjct: 1370 LLEDIHKPHHIAVDWVAGNIYFTDGWVH-IQACEPTFKHCTDVVDTTYSHLNTFALSAND 1428
Query: 204 GTRWLFWTDWGE-----NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
G +FW W E + IER MDG+ R +++ KI WP +T+D +R+Y++D+
Sbjct: 1429 GL--MFWAVWHEVVNKDHGLIERSNMDGTTRVVLLTDKILWPCSITVDAVHKRIYWSDAN 1486
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
+ I+ + Y RKL + G P I L+E
Sbjct: 1487 KNVIE--------SATYDGKQRKL--VRGAGLSSPFSIA----------------LFE-- 1518
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSN 358
WL+W+DWG + + GSN
Sbjct: 1519 -----------------DWLYWSDWGSDSLMACNKYTGSN 1541
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 104/474 (21%), Positives = 167/474 (35%), Gaps = 114/474 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNT-------------------- 43
C+ +CDG DC NG DE C C+ C+ T
Sbjct: 1104 HCIYAHDMCDGYVDCHNGRDER-NCSAPICQSAEFFCTGTKRCILQSWLCDGDDDCGDGM 1162
Query: 44 ------CHPTPL----------GALCTCPPGEILSNDSVT-----CQDMNE----CEQP- 77
CHPT G C E ++ SV C D ++ C +
Sbjct: 1163 DELLPRCHPTTQVATTTVAACWGNEFQCGSHECIAWTSVCDGRTDCADFSDEGSHCVKHC 1222
Query: 78 ----GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEE 133
G C+ +C + ICSC GY L D+ +C ++ A + H +
Sbjct: 1223 GTANGGCAHICRESPSGPICSCQPGYRLNSDHKSCDDVDECA-----TPGHCSHFCQNSK 1277
Query: 134 KGKDHRAQDIVVSGLDLVE-GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
G D G+D + Y G + L N+I +G + +LA+D+++
Sbjct: 1278 GGFKCTCADGYALGVDRRYCKVQY----GEAFLLYMLPNQIRSFSMHGHAQHLLAEDSLS 1333
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
GM D + +FWT+ E I + G+ + + I+ P+ + +D +
Sbjct: 1334 DMHGM--DYRVADKSIFWTEMDEG--IINVMTVGNGKQFTLLEDIHKPHHIAVDWVAGNI 1389
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
YF D + C+ T + L
Sbjct: 1390 YFTDGWVHIQACEPTFKHCTDVVDTTYSHL------------------------------ 1419
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGE-----NPRIERIGMDGSNRSTIISTKI 367
AL +G+ +FW W E + IER MDG+ R +++ KI
Sbjct: 1420 ---NTFALSANDGL-----------MFWAVWHEVVNKDHGLIERSNMDGTTRVVLLTDKI 1465
Query: 368 YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
WP +T+D +R+Y++D+ + I+ YDG R+ V L F+ L D
Sbjct: 1466 LWPCSITVDAVHKRIYWSDANKNVIESATYDGKQRKLVRGAGLSSPFSIALFED 1519
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 107/261 (40%), Gaps = 60/261 (22%)
Query: 80 CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHR 139
C +C + SY C C GY L D +C + F++++ + D++ G
Sbjct: 545 CHHICVLSGNSYTCLCRIGYKLLADKRSC-TVTKDFRFVVVAEEDLLYKIDIDRVGPPLP 603
Query: 140 AQDIVVSGLDLVEGLAYDW---------------------------IGGHI--------- 163
+ S L ++ LA+DW + HI
Sbjct: 604 VA-LPFSNLGMISALAFDWSNQTLHYSDNRHEILSAINVNTFNQWTVHDHIGSVFGMDFD 662
Query: 164 ------YWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP 217
YW+D+ +EVC NG+ ++ +D++ +P G+ L P G LF G+ P
Sbjct: 663 VAHQLLYWVDADKYTLEVCRANGSGHAII-RDDLRRPVGLALYPFAGI--LFVLSAGDAP 719
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS---KLDFIDCKSL------- 267
I MDG + + + P L++D+ R++ +AD+ ++ +D ++L
Sbjct: 720 TITSYTMDGQSPRILPLATLLLPVSLSVDLVARKLVWADATRGTIESLDLRNLFSATPFI 779
Query: 268 --EIKTNV-NYSTIFRKLYWI 285
++K +V + S +++WI
Sbjct: 780 VQQVKAHVSSVSAAHNEIHWI 800
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 102/458 (22%), Positives = 157/458 (34%), Gaps = 118/458 (25%)
Query: 5 CVNLTKVCDGKTDCPNGADE---------GPGCDLAECKHKFGLCSNT-----------C 44
CV VCDG+ DC + +DE G C EC C T C
Sbjct: 78 CVPEIWVCDGEADCHDSSDELDCHSSNCTGYRCHNNECIPNHWHCDETEDCADASDELNC 137
Query: 45 HPTPLGALCTCPPGEILSNDSVTCQD---------------------------MNECEQP 77
H + T P + C D +NEC Q
Sbjct: 138 HAATNSSTTTVAPRCGVDQGRFPCLDGQCLLPSKVCDGRKDCGDGADEGAFCKVNECSQK 197
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR-----------HSI 126
CSQ C C CN G+ L D+ +C ++ A + + H +
Sbjct: 198 K-CSQGCFVATNGSTCYCNTGFRLMADHISCADVDECAEEPYVCSHGCTNSPGSYSCHCL 256
Query: 127 LVADLEEKGKDHRAQD----IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
L +K +A+D ++ S + GL WL S N
Sbjct: 257 EGYQLADKSF-CKARDPEPLLLYSNTKEIRGL----------WLRS-------------N 292
Query: 183 RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPN 241
R Q G+ D R ++WTD + +DGS T+ S +
Sbjct: 293 RYFEIHPAEAQAVGVEFDSD--QRRVYWTDVSTLKSSVYSRRLDGSGLKTLFSAEKTLLE 350
Query: 242 GLTLDIATRRVYFADSKL--------DFIDCKSLEIKTNVNYSTIF-----RKLYWIDEG 288
L+LD T +Y DS + D + C +L + + I + +YW D G
Sbjct: 351 DLSLDWVTNNLYITDSLVKRILVCTTDGLSCSALITDSIDSPRAIIVNPAQKTMYWTDWG 410
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ +NMDG+N + LVS L L L++ T L+W D + R
Sbjct: 411 AQPA---VMHSNMDGTNVAQLVSTDLGWPNGLTLDHT---------TNRLYWCD-AKLSR 457
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 386
+E + + R+ +++ ++ P L I VY++D
Sbjct: 458 LEYLELSTLRRAVVMAEDVFHP--FALAIFEDTVYWSD 493
>gi|194213150|ref|XP_001490793.2| PREDICTED: low-density lipoprotein receptor-like [Equus caballus]
Length = 831
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 152/302 (50%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ L KVC+ DC + +DE C EC G CS+ C +G C CP G L
Sbjct: 270 ECIPLDKVCNSARDCEDWSDEPLRQCGTNECLDNNGGCSHICSDLKIGHECLCPEGFRLV 329
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC+ P CSQ+C N +GSY C C G+ L+ CKA + A+L +N
Sbjct: 330 -DQRRCEDIDECQDPDACSQLCVNLEGSYKCECEAGFQLDPLTKACKATG-TIAYLFFTN 387
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L+ ++ +
Sbjct: 388 RHEVRKMTLDRSEYTSLIPNLKNVVALDTEVASNRVYWSDLSQRKIYSTQIDRAPGFSSY 447
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D V+ L +GLA DWI G+IYW DS L + V D G R L K+ ++PR +++D
Sbjct: 448 DTVIGEDLQAPDGLAVDWIHGNIYWTDSVLGTVSVADTKGLKRKTLFKEKDSKPRAIVVD 507
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD++ R+Y+ DSKL
Sbjct: 508 PVHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTEDIQWPNGITLDLSGGRLYWVDSKLH 565
Query: 261 FI 262
I
Sbjct: 566 SI 567
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLAKDNITQPRGMMLD 200
+V + G+ D GG +YW+DS+L+ I D NG +R I+ K + P + +
Sbjct: 537 LVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSIDVNGGDRKTILEDKKKLAHPFSLAVF 596
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 597 EDK----VFWTD 604
>gi|426222344|ref|XP_004005354.1| PREDICTED: very low-density lipoprotein receptor [Ovis aries]
Length = 921
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/337 (32%), Positives = 164/337 (48%), Gaps = 59/337 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ K DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 378 ECIDISKVCNQKQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFELI 437
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 438 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 494
Query: 122 NRHSILVADLEEK---------------GKDHRAQ------------------DIVVSGL 148
NR I LE K D AQ D V +
Sbjct: 495 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 554
Query: 149 DLVE------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+++ +A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 555 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 614
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 615 SG--FVYWSDWGEPAKIEKAGMNGFDRRALVTADIQWPNGITLDLIKGRLYWLDSKLHML 672
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWID 286
+SLE + TIF ++YWID
Sbjct: 673 SSVDLNGQDRRIVLRSLEFLAHPLALTIFEDRVYWID 709
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 338 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQKQDCRDWSD 397
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 398 EPLKECHVNECLVNN-------------GGCSHICKDLVIGYECDCAAGFEL-IDRKTCG 443
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 444 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCKA-VGKEPSLIFTN 495
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 496 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 551
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 552 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 581
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 582 SKTISV----ATLDGTKRKFLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 626
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 627 AKIEKAGMNGFDRRALVTADIQWPNGITLDLIKGRLYWLDSKLHMLSSVDLNGQDRRIVL 686
>gi|292613604|ref|XP_707254.3| PREDICTED: low-density lipoprotein receptor-related protein 2
isoform 5 [Danio rerio]
Length = 1355
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 169/338 (50%), Gaps = 57/338 (16%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
+ CV +++C+G T+C +G+DEG C +C + C+ CH TP GA C C G
Sbjct: 437 SSECVEFSQLCNGVTNCLDGSDEGGSCQTEKCSEQLK-CAQDCHSTPAGARCGCRMGYKP 495
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK--------AIN 112
+D + C D++EC E+P CS C NT GS+ CSC+ GYVLE D H+CK A
Sbjct: 496 VDDGLRCADVDECVERPNICSHRCNNTLGSFQCSCSHGYVLEPDGHSCKITGEPYLLASV 555
Query: 113 HSAAF-----------LIISNRHSILVADLEEKGK-----------------DHRAQDIV 144
S F L+ + + +L D + + + D + +
Sbjct: 556 QSEVFLLGLRSSSLDILLSAEKRFVLSLDYDWQKQRVYWINLNTDTIKWLSLDQKNKGTF 615
Query: 145 VSGLDLVEGLAYDWIGGHIYWLD---SRLNRIEVCDENG--TNRIVLAKDNITQPRGMML 199
+ G+ + LA DW+ ++YW D S++N + + E G T+R+++ +++ Q R + L
Sbjct: 616 LKGIS-ADSLAVDWVARNLYWTDSENSQINAVRLDSEIGRSTDRVMILGEDLGQLRSIAL 674
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +FW++ G+ +IER GMDGS+R ++S + WP LT+D +R+Y+ D KL
Sbjct: 675 MPQKGI--MFWSETGDEAQIERAGMDGSDRRVLVSKSLRWPVSLTVDSLHQRIYWTDEKL 732
Query: 260 DFI--------DCKSL---EIKTNVNYSTIFRKLYWID 286
I D K L E + + S ++YW D
Sbjct: 733 KCIGSANIDGGDVKLLQLMETPSPFSVSVFNDQVYWSD 770
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 222 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST---- 277
+G+ S+ ++S + + L D +RVY+ + D I SL+ K +
Sbjct: 562 LGLRSSSLDILLSAEKRFVLSLDYDWQKQRVYWINLNTDTIKWLSLDQKNKGTFLKGISA 621
Query: 278 -------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ---LYEALALDLENGML 327
+ R LYW D + + + + S +++ G+ ++AL + G++
Sbjct: 622 DSLAVDWVARNLYWTDSENSQINAVRLDSEIGRSTDRVMILGEDLGQLRSIALMPQKGIM 681
Query: 328 YYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 387
FW++ G+ +IER GMDGS+R ++S + WP LT+D +R+Y+ D
Sbjct: 682 -----------FWSETGDEAQIERAGMDGSDRRVLVSKSLRWPVSLTVDSLHQRIYWTDE 730
Query: 388 KLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
KL I N DG + + L++ F+ + D
Sbjct: 731 KLKCIGSANIDGGDVKLLQLMETPSPFSVSVFNDQ 765
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 106/280 (37%), Gaps = 72/280 (25%)
Query: 72 NECEQPGYCSQMCTNTKG-SYICSCNEGYVLEYDNHTCKAINHSAAFLIIS--------- 121
N CE G CS +C G +C C+ ++L+ D TC S+ L +S
Sbjct: 813 NPCESQG-CSHLCVLAPGLKAVCKCSTQFLLDEDGLTCSKPKDSSFLLFLSPAAVTQVYL 871
Query: 122 -NRHSILVADLEEKGKDHR-----------AQDIVVSGL--------------------- 148
NRHS + +K +HR D+V+ L
Sbjct: 872 QNRHSDVTP---QKWPEHRRFDLPKMNHPNMLDLVLRDLTLYVSDTDQPLVGLFKMKDAA 928
Query: 149 ------------DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
D V + DWI ++YW +L I+V +G VL ++ +
Sbjct: 929 LVPRGKLFQLHKDSVRVFSVDWITLNVYWSSEKLPGIQVTSPDGRFTSVLIREGVGIIES 988
Query: 197 MMLDPSPGTRWLFWT--DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
+ L+P P R F G+ +E + M+G NR+ + + P L L RVY+
Sbjct: 989 IGLEP-PSGRLCFSNRIQEGKMSMVECVFMNGLNRTVVWRNSVR-PTSLILTDEGNRVYW 1046
Query: 255 ADSKLDFIDCKSL------EIKTN---VNYSTIFRKLYWI 285
AD+ L I EIKT + ++ + + L WI
Sbjct: 1047 ADTGLAVIASVGTDGSGYKEIKTEEGLMAFTLVNKVLVWI 1086
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 81/198 (40%), Gaps = 31/198 (15%)
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFR--------------- 280
K+ PN L L + +Y +D+ + ++ V +F+
Sbjct: 893 KMNHPNMLDLVLRDLTLYVSDTDQPLVGLFKMKDAALVPRGKLFQLHKDSVRVFSVDWIT 952
Query: 281 -KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ--LYEALALDLENGMLYYSTLKCTRW 337
+YW E G+ + + DG S+L+ + E++ L+ +G L +S
Sbjct: 953 LNVYWSSEKLPGIQV----TSPDGRFTSVLIREGVGIIESIGLEPPSGRLCFSNR----- 1003
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
G+ +E + M+G NR+ + + P L L RVY+AD+ L I
Sbjct: 1004 ---IQEGKMSMVECVFMNGLNRTVVWRNSVR-PTSLILTDEGNRVYWADTGLAVIASVGT 1059
Query: 398 DGTGRQQVILIDLMVEFT 415
DG+G +++ + ++ FT
Sbjct: 1060 DGSGYKEIKTEEGLMAFT 1077
>gi|403289094|ref|XP_003935703.1| PREDICTED: very low-density lipoprotein receptor isoform 2 [Saimiri
boliviensis boliviensis]
Length = 873
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 171/362 (47%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDISKVCNQEQDCRDWSDEPLKECHINECLINNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQDIV---------------------V 145
NR I LE K D AQ + V
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 506
Query: 146 SGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+D V +A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 290 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 350 EPLKECHINECLINN-------------GGCSHICKDLVIGYECDCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCKA-VGKEPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 534 SKTISV----ATLDGTKRKFLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|403289092|ref|XP_003935702.1| PREDICTED: very low-density lipoprotein receptor isoform 1 [Saimiri
boliviensis boliviensis]
Length = 845
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 171/362 (47%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDISKVCNQEQDCRDWSDEPLKECHINECLINNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQDIV---------------------V 145
NR I LE K D AQ + V
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 506
Query: 146 SGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+D V +A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 290 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 350 EPLKECHINECLINN-------------GGCSHICKDLVIGYECDCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCKA-VGKEPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 534 SKTISV----ATLDGTKRKFLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|315506985|ref|NP_001186819.1| very low-density lipoprotein receptor precursor [Sus scrofa]
gi|315139195|gb|ADT80790.1| very low density lipoprotein receptor [Sus scrofa]
Length = 845
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 173/362 (47%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDISKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQ------------------DIVVSGL 148
NR I LE K D AQ D V +
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 506
Query: 149 DLVE------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+++ +A DW+ IYW D+ I V +G+ R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGSKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++T I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRALVTTDIQWPNGITLDLIKGRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 164/420 (39%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 290 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 350 EPLKECHVNECLVNN-------------GGCSHICKDLVIGYECDCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCK-AVGKEPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DGS L + L E ++A+D +G +Y W+DWGE
Sbjct: 534 SKTISV----ATLDGSKRKFLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++T I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRALVTTDIQWPNGITLDLIKGRLYWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|395819149|ref|XP_003782962.1| PREDICTED: very low-density lipoprotein receptor isoform 2
[Otolemur garnettii]
Length = 845
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 170/362 (46%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDISKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQDIV---------------------V 145
NR I LE K D AQ + V
Sbjct: 447 NRRDIRKIGLERKEYIQLIEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 506
Query: 146 SGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+D V +A DW+ IYW D+ I V +GT R L + +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSGLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 290 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 350 EPLKECHVNECLVNN-------------GGCSHICKDLVIGYECDCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCKA-VGKEPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L I Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----IEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 534 SKTISV----ATLDGTKRKFLFNSGLREPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|327263592|ref|XP_003216603.1| PREDICTED: very low-density lipoprotein receptor-like [Anolis
carolinensis]
Length = 848
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 151/298 (50%), Gaps = 46/298 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ +KVC+ K DC + +DE C++ EC G CS+ C +G C CP G L
Sbjct: 330 ECIDSSKVCNQKQDCKDWSDEPLKQCNINECLVNNGGCSHICKDLVIGFECDCPAGFQLI 389
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ PG CSQ+C NTK Y C C+ GY ++ CKAI + L+ +N
Sbjct: 390 -DRKTCGDIDECQNPGICSQICINTKLGYKCECSRGYRMDAQTGVCKAIGGEPS-LLFTN 447
Query: 123 RHSILVADLEEKGKDHRA---QDIVVSGLDLVE--------------------------- 152
+I LE + +++V G D+VE
Sbjct: 448 HWNIRQFALERQDYTQLVGGLRNVVALGADMVERRVIWADAGRNGIFSAFLTSSNSPGRH 507
Query: 153 -----------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
G+A DWI +IYW DS L I V NGT VL N+T+P + +DP
Sbjct: 508 WQIVDNVQNPSGIAVDWIYENIYWTDSSLKSISVATLNGTKWTVLFNTNLTEPASIAVDP 567
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++W+DWGE +IE+ GM+G +R +++T I P+G+ LD+ R+Y+ D+KL
Sbjct: 568 ISG--FMYWSDWGEPAKIEKAGMNGLDRQPLVTTDIERPSGIALDLVKNRLYWVDAKL 623
>gi|74136369|ref|NP_001028079.1| very low-density lipoprotein receptor precursor [Macaca mulatta]
gi|40231967|gb|AAR83314.1| very low density lipoprotein receptor [Macaca mulatta]
Length = 873
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 170/362 (46%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQDIV---------------------V 145
NR I LE K D AQ + V
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 506
Query: 146 SGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+D V +A DW+ IYW D+ I V +GT R L ++ P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLRDPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 290 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 350 EPLKECHINECLVNN-------------GGCSHICKDLVIGYECDCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCKA-VGKEPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L + ++A+D +G +Y W+DWGE
Sbjct: 534 SKTISV----ATLDGTKRKFLFNSDLRDPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|395819147|ref|XP_003782961.1| PREDICTED: very low-density lipoprotein receptor isoform 1
[Otolemur garnettii]
Length = 873
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 170/362 (46%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDISKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQDIV---------------------V 145
NR I LE K D AQ + V
Sbjct: 447 NRRDIRKIGLERKEYIQLIEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 506
Query: 146 SGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+D V +A DW+ IYW D+ I V +GT R L + +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSGLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 290 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 350 EPLKECHVNECLVNN-------------GGCSHICKDLVIGYECDCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCKA-VGKEPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L I Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----IEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 534 SKTISV----ATLDGTKRKFLFNSGLREPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|348573069|ref|XP_003472314.1| PREDICTED: very low-density lipoprotein receptor-like [Cavia
porcellus]
Length = 847
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 170/362 (46%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C+++ KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 304 ECIDILKVCNQQQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFELI 363
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 364 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 420
Query: 122 NRHSILVADLEEK---------------GKDHRAQDIV---------------------V 145
NR I LE K D AQ + V
Sbjct: 421 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 480
Query: 146 SGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+D V +A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 481 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 540
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 541 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHML 598
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 599 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 655
Query: 310 VS 311
V+
Sbjct: 656 VN 657
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 264 CIHGSRQCNGIRDCVDGSDEVNCKNANQCLGPGKFKCRSGECIDILKVCNQQQDCRDWSD 323
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 324 EPLKECHVNECLVNN-------------GGCSHICKDLVIGYECDCAAGFEL-IDRKTCG 369
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 370 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCKA-VGKEPSLIFTN 421
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 422 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 477
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 478 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 507
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 508 SKTISV----ATLDGTKRKFLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 552
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 553 AKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 612
>gi|126723673|ref|NP_001075657.1| very low-density lipoprotein receptor precursor [Oryctolagus
cuniculus]
gi|547843|sp|P35953.1|VLDLR_RABIT RecName: Full=Very low-density lipoprotein receptor; Short=VLDL
receptor; Short=VLDL-R; Flags: Precursor
gi|217753|dbj|BAA01874.1| VLDL receptor precursor [Oryctolagus cuniculus]
Length = 873
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 172/362 (47%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ + DC + +DE C + EC G CS+ C + +G C C G E++
Sbjct: 330 ECIDISKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDSVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQ------------------DIVVSGL 148
NR I LE K D AQ D V +
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADVSQKAIFSASIDDKVGRHV 506
Query: 149 DLVE------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+++ +A DW+ IYW D+ I V +G R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASRTISVATLDGAKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 164/420 (39%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 290 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C ++ Y C C G+ L D TC
Sbjct: 350 EPLKECHVNECLVNN-------------GGCSHICKDSVIGYECDCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCK-AVGKEPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADVSQKAIFSASIDDKVG 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 534 SRTISV----ATLDGAKRKFLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|326678476|ref|XP_693526.5| PREDICTED: low-density lipoprotein receptor-related protein 1B,
partial [Danio rerio]
Length = 2928
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/422 (30%), Positives = 178/422 (42%), Gaps = 104/422 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ ++C+G DC + +DEGP CD EC + G CS+ C P G +C+CP G L +
Sbjct: 1125 CLPPERICNGWKDCADHSDEGPYCD--ECSIRKGGCSHECSVAPGKGVVCSCPAGFQLGS 1182
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C + CSQ+C K + CSC G+ L D +C + + AF+I S R
Sbjct: 1183 DAQTCEILDYCSKHLRCSQVCEQHKNTVKCSCYPGWSLGSDGDSCYSTDPFEAFIIFSIR 1242
Query: 124 HSI------------------------------------LVAD------LEEKGKDHRAQ 141
H I +V D L E G +
Sbjct: 1243 HEIRRINLHKGDYSLLVPGLRNTIALDFHFSQSLLYWTDVVEDKIYRGKLSEGGGVSAIE 1302
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGLA DWI G++YW+DS L++IEV NG R L + PR + +DP
Sbjct: 1303 VVVQHGLATPEGLAVDWIAGNLYWIDSNLDQIEVSKLNGELRTTLIAGGMEHPRAIAVDP 1362
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW PRIE M G R + WPNGLTLD R+ + D++
Sbjct: 1363 GQGA--LFWTDWDATFPRIEGASMSGKQRHVVFKDMDTGAWPNGLTLDHMESRIIWTDAR 1420
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ--LYE 316
D I YS ++ DG+ ++ G L
Sbjct: 1421 SDAI------------YSALY----------------------DGTGVIEILRGHEFLSH 1446
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYW 369
A+ L G +Y WTDW N + G+N + I T +IY
Sbjct: 1447 PFAVSLFGGNVY-----------WTDWRTNTLTKANKWTGANVTVIQKTSAQPFDLEIYH 1495
Query: 370 PN 371
P+
Sbjct: 1496 PS 1497
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 148/311 (47%), Gaps = 55/311 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD--LAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
RCV+ +K+CDG DC +G DEG C + C+ + C C G C C G +
Sbjct: 56 RCVHFSKLCDGVRDCEDGYDEGVHCRELVRSCQER--RCQFDCVVMRNGTSCFCGEGFEV 113
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFL 118
D C+D +EC G CSQ+C NT+GSY C+C +G+ L+ + +CKA L
Sbjct: 114 DEDGRRCRDHDECRDYGTCSQICMNTQGSYRCACTDGFSLQANRRSCKAKTDPGDKPPVL 173
Query: 119 IISNRHSILVADL------------------------EE--------------------- 133
+ +N + I V L EE
Sbjct: 174 LTTNLNFISVLYLNGSTMPNLKSMETNGTQMLDFIYREESLCWLSVVQDTGQLWCARMTK 233
Query: 134 -KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
KG + Q + L VE +A DW+ G+ Y++D +RI VC E G + + +I
Sbjct: 234 LKGFSEKHQIRIGQNLQNVEHMAIDWLTGNFYFVDRVNDRIFVCSEQGDTCVTIIDLDIQ 293
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP G LF+TD+G ++ER MDG+NR+ I+ K P +TLD+ + V
Sbjct: 294 NPKGLALDPIMGK--LFFTDYGTVAKVERCNMDGTNRTKIVEYKTEQPTAVTLDLVKKLV 351
Query: 253 YFADSKLDFID 263
Y++D+ LDFI+
Sbjct: 352 YWSDAYLDFIE 362
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 181/426 (42%), Gaps = 106/426 (24%)
Query: 78 GYCSQMCTNTKG-SYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---------- 126
G CSQ+C T + CSC GY L D TC+ + +FL+ S I
Sbjct: 1818 GGCSQICLPTSEITRTCSCTTGYNLRQDRSTCEGLQ---SFLMYSVNEGIRGLSLDPSDN 1874
Query: 127 ------LVADLEEKGKDHRA-------------------------QDIVVSGLDLVEGLA 155
L L G D+ A +DI+ SGL VEGLA
Sbjct: 1875 SEVLTPLSGTLFAVGLDYHAKNDTLYWTDMGSNKISRSSRDQTWREDIITSGLGRVEGLA 1934
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D LN IEV NG R V+ + + QPR + + P G +LFWT+WG+
Sbjct: 1935 VDWIAGNIYWADHGLNLIEVARLNGMYRAVVISEELDQPRAIAVHPVKG--FLFWTEWGQ 1992
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEI--KTNV 273
+P I R +DGS +S ++ST + PNG+++D ++Y+ D++ + I+ +LE + +
Sbjct: 1993 SPTISRSRLDGSEQSVLVSTGLARPNGVSIDYQENKLYWCDARNNKIERINLERGEQREI 2052
Query: 274 NYST---------IFRK-LYWIDEG----------------------GNGVPLKIGKA-N 300
+S+ +F L+W D G V LK K N
Sbjct: 2053 VFSSSGVDMFSIAVFGAYLFWSDRAYANGSIRRASKKDAVDVVTIRSGLSVSLKDVKVFN 2112
Query: 301 MD---GSNASILVSGQLYEALALDLEN---------GMLYYSTLKCTRWLFWTDWGENPR 348
D G+NA +G + L L N G L L+C R+ + + E
Sbjct: 2113 QDREKGTNACSKSNGGC-QQLCFYLGNNRKTCACAHGYLAQDGLRCIRYEGYLLYSERTV 2171
Query: 349 IERIGMDGSN--RSTIISTK--IYWPNGLTLDI-------ATRRVYFADSKLDFIDFCNY 397
+ I + N S I + + +Y+ N + L T R++F+D I N
Sbjct: 2172 LRTIHLSDENDLNSPIRAYENPVYFKNIIALAFDHRQNAHGTNRIFFSDVHYGNIQVIND 2231
Query: 398 DGTGRQ 403
D TGR+
Sbjct: 2232 DWTGRR 2237
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 107/241 (44%), Gaps = 55/241 (22%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA-DLE 132
+ G CS +C ++ S +C C G+VL D +CK + R ++ D+
Sbjct: 454 RKGGCSHICLLSHNYKSRVCRCRTGHVLASDGKSCKKPKNELFLFYGKGRPGVIRGLDMN 513
Query: 133 EKGKDH-----------RAQD------------------------------IVVSGLDLV 151
K D RA D I+ LD V
Sbjct: 514 IKSGDEHLIQIEGLVSPRALDFHAESGYVYFADTTSFLIGRQKIDGTARETILKEELDNV 573
Query: 152 EGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
EG++ DWIG ++YW + + + D R L + N++ PR +++DP G W+
Sbjct: 574 EGISVDWIGNNLYWTNDGYRKTINVAGLDRPSHTRRTLLEGNMSHPRAIVVDPLNG--WM 631
Query: 209 FWTDWGENP------RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+WTDW E+ RIE+ MDGS+R +++ + WPNGLTLD ++ +Y+ D+ D I
Sbjct: 632 YWTDWEEDELIDSRGRIEKAWMDGSHRQIFVTSNMLWPNGLTLDHSSSVMYWCDAYYDHI 691
Query: 263 D 263
+
Sbjct: 692 E 692
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 162/424 (38%), Gaps = 83/424 (19%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
V+ +CV+ VCDG DC + +DE GC+++ CK C+N C P E
Sbjct: 1080 VSGKCVSKDWVCDGDIDCEDQSDE-EGCEVSVCKPPKFPCAND--------TSVCLPPER 1130
Query: 61 LSNDSVTCQDM-------NECE-QPGYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAI 111
+ N C D +EC + G CS C+ G +CSC G+ L D TC+ +
Sbjct: 1131 ICNGWKDCADHSDEGPYCDECSIRKGGCSHECSVAPGKGVVCSCPAGFQLGSDAQTCEIL 1190
Query: 112 NHSAAFLIISN---RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS 168
++ + L S +H V G + D E I+ +
Sbjct: 1191 DYCSKHLRCSQVCEQHKNTVKCSCYPGWSLGSDGDSCYSTDPFEAFI-------IFSIRH 1243
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ RI + G +++ T + LD L+WTD E+ +G
Sbjct: 1244 EIRRINL--HKGDYSLLVPGLRNT----IALDFHFSQSLLYWTDVVEDKIYRGKLSEGGG 1297
Query: 229 RSTI---ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
S I + + P GL +D +Y+ DS LD
Sbjct: 1298 VSAIEVVVQHGLATPEGLAVDWIAGNLYWIDSNLD------------------------- 1332
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
+I + ++G + L++G + A+ ++ G LFWTDW
Sbjct: 1333 ---------QIEVSKLNGELRTTLIAGGMEHPRAIAVDPGQGA---------LFWTDWDA 1374
Query: 346 N-PRIERIGMDGSNRSTIIST--KIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
PRIE M G R + WPNGLTLD R+ + D++ D I YDGTG
Sbjct: 1375 TFPRIEGASMSGKQRHVVFKDMDTGAWPNGLTLDHMESRIIWTDARSDAIYSALYDGTGV 1434
Query: 403 QQVI 406
+++
Sbjct: 1435 IEIL 1438
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 126/272 (46%), Gaps = 35/272 (12%)
Query: 78 GYCSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G+CS +C N GS CSC L +N TC+ + FL+ + R I D++
Sbjct: 1513 GHCSHLCLLNYNGSASCSCPHLMKLSANNSTCQGVKR---FLLYARRSEIRGVDIDNPYL 1569
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ + V +D V + YD + IYW D + I+ NGT + +++ RG
Sbjct: 1570 N-VIMALTVPDIDDVTSMDYDAVEERIYWADVKSRTIKRAFINGTQLQTVLSGDLSNVRG 1628
Query: 197 MMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTII--------------STKIYWPN 241
+ +D +R ++W + + I +DGS ++T++ K++W +
Sbjct: 1629 LAIDWL--SRNMYWMSSDNDETHINVARLDGSLKTTVVHGMDKPKSLVLHPSKGKMFWMD 1686
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLE-IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
G T+++A S + + E + ++++S+ KLYWI GNG I + N
Sbjct: 1687 GGTINMAN----MDGSNIKILHQNQKEPVGLSIDFSS--NKLYWI-SSGNGT---INRCN 1736
Query: 301 MDGSNASIL--VSGQLYEALALDLENGMLYYS 330
+DGS ++ + QL +A AL + G L+++
Sbjct: 1737 LDGSGLDVIDSMKSQLRKATALAVMGGKLWWA 1768
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 47/69 (68%)
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
LF+TD+G ++ER MDG+NR+ I+ K P +TLD+ + VY++D+ LDFI+ +Y
Sbjct: 307 LFFTDYGTVAKVERCNMDGTNRTKIVEYKTEQPTAVTLDLVKKLVYWSDAYLDFIEVVDY 366
Query: 398 DGTGRQQVI 406
+G RQ ++
Sbjct: 367 NGKNRQTIV 375
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
LYW + I + ++D S + + ++L E+ + +C +FWT
Sbjct: 2258 LYWT----SSTTASITRHHIDQSRTNAFDRDTV---VSLSEEDHPHVLTLDECQNLMFWT 2310
Query: 342 DWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
+W E +P I R + G N I+ST + PNGLT+D ++YF+D L I+ C++DG+
Sbjct: 2311 NWNEQHPSIMRSTLTGRNIRIIVSTDVITPNGLTIDHKAEKLYFSDGSLGHIERCDFDGS 2370
Query: 401 GRQQVI 406
R ++
Sbjct: 2371 QRYVIV 2376
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 102/269 (37%), Gaps = 59/269 (21%)
Query: 113 HSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNR 172
H + S+ H +++ D + I+ + VEGLAY +YW S
Sbjct: 2211 HGTNRIFFSDVH---YGNIQVINDDWTGRRIIAENVGSVEGLAYHRGWDVLYWTSSTTAS 2267
Query: 173 I--EVCDENGTNRI----VLAKDNITQPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMD 225
I D++ TN V++ P + LD +FWT+W E +P I R +
Sbjct: 2268 ITRHHIDQSRTNAFDRDTVVSLSEEDHPHVLTLDECQNL--MFWTNWNEQHPSIMRSTLT 2325
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
G N I+ST + PNGLT+D ++YF+D L I+
Sbjct: 2326 GRNIRIIVSTDVITPNGLTIDHKAEKLYFSDGSLGHIE---------------------- 2363
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR-WLFWTDWG 344
+ + DGS ++V ++G + L R ++FW+DW
Sbjct: 2364 ------------RCDFDGSQRYVIV------------KSGPGTFFGLAIYRDFIFWSDWT 2399
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGL 373
I G+N + S + P G+
Sbjct: 2400 RRAVIRSDKFTGANTKVLRSDIPHQPMGI 2428
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 31/208 (14%)
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
+ +IYW + + I +R + ++L + L + + R +YW+ +
Sbjct: 1591 VEERIYWADVKSRTI--KRAFINGTQLQTVLSGDLSNVRGLAIDWLSRNMYWMSSDNDET 1648
Query: 293 PLKIGKANMDGSNASILVSGQ-LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
+ + A +DGS + +V G ++L L G + FW D G I
Sbjct: 1649 HINV--ARLDGSLKTTVVHGMDKPKSLVLHPSKGKM-----------FWMDGGT---INM 1692
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
MDGSN I+ P GL++D ++ ++Y+ S I+ CN DG+G +D++
Sbjct: 1693 ANMDGSN-IKILHQNQKEPVGLSIDFSSNKLYWISSGNGTINRCNLDGSG------LDVI 1745
Query: 412 VEFTNDLMGDNGVPALALDLENGMLYYS 439
D M A AL + G L+++
Sbjct: 1746 -----DSMKSQLRKATALAVMGGKLWWA 1768
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 56/137 (40%), Gaps = 24/137 (17%)
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
Q E +A+D G Y+ N RI G TII I P G
Sbjct: 250 QNVEHMAIDWLTGNFYFVDRV------------NDRIFVCSEQGDTCVTIIDLDIQNPKG 297
Query: 373 LTLDIATRRVYFAD-SKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDL 431
L LD +++F D + ++ CN DGT R ++ VE+ + A+ LDL
Sbjct: 298 LALDPIMGKLFFTDYGTVAKVERCNMDGTNRTKI------VEYKTEQ-----PTAVTLDL 346
Query: 432 ENGMLYYSTEGAEFLKT 448
++Y+S +F++
Sbjct: 347 VKKLVYWSDAYLDFIEV 363
>gi|410927828|ref|XP_003977342.1| PREDICTED: very low-density lipoprotein receptor-like isoform 1
[Takifugu rubripes]
Length = 844
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 146/300 (48%), Gaps = 46/300 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ ++KVC+ DCP+ +DE C++ EC G CS+ C +G C C PG L
Sbjct: 328 CIEMSKVCNKVRDCPDWSDEPIKECNVNECLLNNGGCSHICKDMVIGFECDCTPGLQLI- 386
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D TC D+NEC PG CSQ+C N KG Y C C+ GY ++ CKA+ LI +NR
Sbjct: 387 DHKTCGDINECLNPGICSQICINLKGGYKCECHNGYQMDPTTGVCKAVGKEPC-LIFTNR 445
Query: 124 HSILVADLEEK---------------GKDHRAQDI------------------------- 143
I LE K D Q I
Sbjct: 446 RDIRRLGLERKEYTQLVEQQRNAVALDADFNQQTIFWADLGQKAIFSAVLDKRGDIGVHT 505
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + G+A DWI ++YW D I V + NGT VL ++ +P + +DP
Sbjct: 506 KVVDNVQTPVGIAVDWIYKNLYWSDLGTKTISVSNFNGTKVKVLFDRSLKEPASIAVDPL 565
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W+DWGE +IE+ GM+G +R ++ + + WPNG+TLD+ R+Y+ DSKL +
Sbjct: 566 SG--FLYWSDWGEPAKIEKSGMNGVDRQVLVVSDLQWPNGITLDLIKGRLYWVDSKLHML 623
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 17/131 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
I++ LYW D G + + +N +G+ +L L E ++A+D +G LY
Sbjct: 522 IYKNLYWSDLGTKTISV----SNFNGTKVKVLFDRSLKEPASIAVDPLSGFLY------- 570
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
W+DWGE +IE+ GM+G +R ++ + + WPNG+TLD+ R+Y+ DSKL +
Sbjct: 571 ----WSDWGEPAKIEKSGMNGVDRQVLVVSDLQWPNGITLDLIKGRLYWVDSKLHMLCSV 626
Query: 396 NYDGTGRQQVI 406
+ +G R++V+
Sbjct: 627 DLNGDNRKKVL 637
>gi|410927830|ref|XP_003977343.1| PREDICTED: very low-density lipoprotein receptor-like isoform 2
[Takifugu rubripes]
Length = 864
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 146/300 (48%), Gaps = 46/300 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ ++KVC+ DCP+ +DE C++ EC G CS+ C +G C C PG L
Sbjct: 328 CIEMSKVCNKVRDCPDWSDEPIKECNVNECLLNNGGCSHICKDMVIGFECDCTPGLQLI- 386
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D TC D+NEC PG CSQ+C N KG Y C C+ GY ++ CKA+ LI +NR
Sbjct: 387 DHKTCGDINECLNPGICSQICINLKGGYKCECHNGYQMDPTTGVCKAVGKEPC-LIFTNR 445
Query: 124 HSILVADLEEK---------------GKDHRAQDI------------------------- 143
I LE K D Q I
Sbjct: 446 RDIRRLGLERKEYTQLVEQQRNAVALDADFNQQTIFWADLGQKAIFSAVLDKRGDIGVHT 505
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + G+A DWI ++YW D I V + NGT VL ++ +P + +DP
Sbjct: 506 KVVDNVQTPVGIAVDWIYKNLYWSDLGTKTISVSNFNGTKVKVLFDRSLKEPASIAVDPL 565
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W+DWGE +IE+ GM+G +R ++ + + WPNG+TLD+ R+Y+ DSKL +
Sbjct: 566 SG--FLYWSDWGEPAKIEKSGMNGVDRQVLVVSDLQWPNGITLDLIKGRLYWVDSKLHML 623
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 17/131 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
I++ LYW D G + + +N +G+ +L L E ++A+D +G LY
Sbjct: 522 IYKNLYWSDLGTKTISV----SNFNGTKVKVLFDRSLKEPASIAVDPLSGFLY------- 570
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
W+DWGE +IE+ GM+G +R ++ + + WPNG+TLD+ R+Y+ DSKL +
Sbjct: 571 ----WSDWGEPAKIEKSGMNGVDRQVLVVSDLQWPNGITLDLIKGRLYWVDSKLHMLCSV 626
Query: 396 NYDGTGRQQVI 406
+ +G R++V+
Sbjct: 627 DLNGDNRKKVL 637
>gi|409426|gb|AAA53684.1| very low density lipoprotein receptor [Homo sapiens]
Length = 873
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 170/362 (46%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ Y ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRAYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQDIV---------------------V 145
NR I LE K D AQ + V
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 506
Query: 146 SGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+D V +A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSEHATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 290 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 350 EPLKECHINECLVNN-------------GGCSHICKDLVIGYECDCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRAYQMDLATGVCKA-VGKEPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 534 SKTISV----ATLDGTKRKFLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|332249527|ref|XP_003273909.1| PREDICTED: very low-density lipoprotein receptor isoform 1
[Nomascus leucogenys]
Length = 873
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 170/362 (46%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C+++ KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDINKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQDIV---------------------V 145
NR I LE K D AQ + V
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 506
Query: 146 SGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+D V +A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
+SLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLESLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 290 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDINKVCNQEQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 350 EPLKECHINECLVNN-------------GGCSHICKDLVIGYECDCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCKA-VGKEPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 534 SKTISV----ATLDGTKRKFLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|28373937|pdb|1N7D|A Chain A, Extracellular Domain Of The Ldl Receptor
Length = 699
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 152/302 (50%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 267 ECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLV 326
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
C+D++EC+ P CSQ+C N +G Y C C EG+ L+ CKA+ S A+L +N
Sbjct: 327 AQR-RCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG-SIAYLFFTN 384
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L ++ +
Sbjct: 385 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY 444
Query: 142 DIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D V+S + +GLA DWI +IYW DS L + V D G R L ++ ++PR +++D
Sbjct: 445 DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVD 504
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL
Sbjct: 505 PVHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 562
Query: 261 FI 262
I
Sbjct: 563 SI 564
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLD 200
+V + G+ D + G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 534 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF 593
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 594 EDK----VFWTD 601
>gi|380012876|ref|XP_003690500.1| PREDICTED: vitellogenin receptor-like [Apis florea]
Length = 1750
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 156/336 (46%), Gaps = 59/336 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKF-GLCSNTCHPTPLGALCTCPPGEIL 61
RC+ L CD K DC + +DE C A+ K C + C TP G C+C G L
Sbjct: 169 RCIFLNATCDEKNDCGDNSDEDLDACKKADASCKLTAKCQHNCRKTPKGGQCSCRSGYKL 228
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA----------- 110
N+ TC D+NEC+ G C Q C N+ GSY C C GYV++ D TCKA
Sbjct: 229 INNQ-TCTDINECDNYGICDQQCINSAGSYTCFCQPGYVMQDDKKTCKAEGGEATMVFSI 287
Query: 111 --------------------INHSAAFLI---------ISNRHSILVADLEEKGKDHRAQ 141
+ H+ A + I N + +V LE+ + +
Sbjct: 288 KSEIHGYYLDSQIYFPISQNLQHAVAVSLDANYVYWSDIENGNEAIVKSLEDGS---QRE 344
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
IV +GL + +A DW+ +IY+ DS I VC+++G+ V+ K+ +PRG+ L P
Sbjct: 345 IIVTTGLSSPDNIAVDWVTDNIYFTDSGYMHIGVCNDDGSYCTVIIKERRDKPRGLALLP 404
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
S G +WT+WG N I GMDG N + +++ + WPN L++D R+Y+ D+K
Sbjct: 405 SSGI--FYWTEWGMNSSILMAGMDGKNITVLVNQDLEWPNSLSIDYPNNRLYWIDTKQKM 462
Query: 262 IDCKSLE-----------IKTNVNYSTIFRKLYWID 286
I+ L+ K + + KLYW D
Sbjct: 463 IESIRLDGTDRRIVLKGTAKKPFSLAVFENKLYWSD 498
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 172/371 (46%), Gaps = 87/371 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ KVCDGK DC + +DE C+++ K+ C+N CH TP G +CTC G LS+D
Sbjct: 1199 CLPFNKVCDGKIDCLDQSDEFGDCEISCTKN--NPCTNMCHKTPTGPVCTCRNGYHLSSD 1256
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS--- 121
TC+D++EC++ CSQ+C NT GS+ CSC EGYV+ D +CK + +S
Sbjct: 1257 LKTCEDIDECKK-NVCSQICHNTNGSFTCSCYEGYVIRSDKTSCKVAGSQMEIITVSGTD 1315
Query: 122 ------NRHSILV----ADLEEKGKDHRAQD-----------------------IVVSGL 148
N +SI + D E G D ++ V+GL
Sbjct: 1316 IRKLSPNLNSIELIYKEVDFEINGIDVNTREDTIYWSNEMLGMINKIHVKTKERKTVTGL 1375
Query: 149 DLVEGLAYDWIGGHIYWLDSRL-NRIEVC--DENGTNRIV-LAKDNITQPRGMMLDPSPG 204
E LA DWI ++Y+ D+ + I+VC ++ +IV +A N R + + P
Sbjct: 1376 GRPEALAVDWITDNVYFNDNDYTSSIQVCNLEQKKCAKIVSIAGKN----RVISIAVEPK 1431
Query: 205 TRWLFW--TDWG--ENP--RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
WLFW T W + P +I R G+N + I+ + LT+D A ++Y++D+
Sbjct: 1432 KGWLFWSQTSWAFYDRPMSKIYRSNTMGNNATAIVHLDLGLVLALTIDYARSKLYWSDTH 1491
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
I+ +N+DGSN +++++ +++A+
Sbjct: 1492 FKNIE----------------------------------SSNLDGSNRAVVLNTDIHQAM 1517
Query: 319 ALDLENGMLYY 329
++++ LY+
Sbjct: 1518 SINIYEDSLYW 1528
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 121/304 (39%), Gaps = 79/304 (25%)
Query: 80 CSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH 138
CSQ+C N++ Y C+C+ L YDNHTC+AI LII+ ++ + E GK
Sbjct: 548 CSQLCLLNSQNGYTCACSLDKELNYDNHTCRAI-KKKMHLIIAAGNTFIDYYHELLGKPK 606
Query: 139 RAQDIVVSGL----------------------------------------DLVEGLAYDW 158
A +++ + +++ G+ +D+
Sbjct: 607 MATSVMLKRVTAIAYNPLTDGLLASDQLTDTIFHLNTHTGEVKSVITIENEILGGMDFDY 666
Query: 159 IGGHIYWLDSRLNRIEVCDENGTNRIVLA-KDNITQPRGMMLDPSPGTRWLFWTDWGENP 217
IG ++Y D + IEV N + + KD +P + L P G + + E
Sbjct: 667 IGNNVYLSDVKHKTIEVHSLNSKEKTIFYFKD---EPYDIALVPEEGIMMVVFR-RDELY 722
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST 277
I+ + M+G + KI T+ I K +++Y
Sbjct: 723 HIDLMNMNG------LGPKITIVGNKTVLIGP--------------------KISLSYDG 756
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRW 337
F++L+W D+G +IG + G IL +G L E ++L L L+++ K +
Sbjct: 757 DFKQLFWSDQGSG----RIGSTTIPGFETYILRTG-LSEPVSLALLGDYLFWTQYK-SNQ 810
Query: 338 LFWT 341
L+WT
Sbjct: 811 LYWT 814
>gi|332249529|ref|XP_003273910.1| PREDICTED: very low-density lipoprotein receptor isoform 2
[Nomascus leucogenys]
Length = 845
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 170/362 (46%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C+++ KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDINKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQDIV---------------------V 145
NR I LE K D AQ + V
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 506
Query: 146 SGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+D V +A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
+SLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLESLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 290 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDINKVCNQEQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 350 EPLKECHINECLVNN-------------GGCSHICKDLVIGYECDCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCKA-VGKEPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 534 SKTISV----ATLDGTKRKFLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|148703513|gb|EDL35460.1| mCG140833 [Mus musculus]
Length = 804
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 162/331 (48%), Gaps = 63/331 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C++ + VCDG+ DC +G+DEG C + C GLC ++C+ +P G +C C PG L ++
Sbjct: 419 CLSFSMVCDGREDCVDGSDEGGECSSSVCSP--GLCYHSCYQSPTGPVCVCAPGFELESN 476
Query: 65 SVTCQDMNECEQPG--YCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
CQD+NEC+QP CSQ C NT+GSYIC+C+ GY+L D HTCKA
Sbjct: 477 GQICQDVNECQQPSGQPCSQTCINTEGSYICACHPGYLLGPDGHTCKATGIKP------- 529
Query: 123 RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
+ + DWIG ++YW D R +I
Sbjct: 530 -----------------------------DCIGVDWIGRNLYWTDGRAGQILAIQLTAMG 560
Query: 183 R-----IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
R V+ D++ +P+ + LDP G ++W++ GE PRIE+ GMDGS+R +++ +
Sbjct: 561 RGKSEYTVVLDDDLIRPQSLALDPLNGL--MYWSETGEEPRIEQAGMDGSSRKILVNQGL 618
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSL-----------EIKTNVNYSTIFRKLYWID 286
P + LD + +++++D K I +L +IK+ + + K++W D
Sbjct: 619 GHPTSIALDQLSWKIFWSDEKFHCIGSVNLDGSGISMMQLTQIKSPFSVAVFEDKVFWSD 678
Query: 287 EGGNGVPLKIGKANMDGSNASILV--SGQLY 315
+ M G + ++L+ SGQ +
Sbjct: 679 LQTRTIQH---AEKMTGKDRAVLIKRSGQPF 706
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 15/163 (9%)
Query: 264 CKSLEIKTN-VNYSTIFRKLYWID-EGGNGVPLKIGKANMDGSNASILVSGQLY--EALA 319
CK+ IK + + I R LYW D G + +++ S ++++ L ++LA
Sbjct: 522 CKATGIKPDCIGVDWIGRNLYWTDGRAGQILAIQLTAMGRGKSEYTVVLDDDLIRPQSLA 581
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
LD NG++Y W++ GE PRIE+ GMDGS+R +++ + P + LD +
Sbjct: 582 LDPLNGLMY-----------WSETGEEPRIEQAGMDGSSRKILVNQGLGHPTSIALDQLS 630
Query: 380 RRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+++++D K I N DG+G + L + F+ + D
Sbjct: 631 WKIFWSDEKFHCIGSVNLDGSGISMMQLTQIKSPFSVAVFEDK 673
>gi|390457920|ref|XP_002742941.2| PREDICTED: very low-density lipoprotein receptor isoform 2
[Callithrix jacchus]
Length = 873
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 162/337 (48%), Gaps = 59/337 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C+ ++KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIEISKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVVGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGREPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQDIV---------------------V 145
NR I LE K D AQ + V
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 506
Query: 146 SGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+D V +A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWID 286
KSLE + TIF ++YWID
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWID 661
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 290 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIEISKVCNQEQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 350 EPLKECHVNECLVNN-------------GGCSHICKDLVVGYECDCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCKA-VGREPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 534 SKTISV----ATLDGTKRKFLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|296189847|ref|XP_002742940.1| PREDICTED: very low-density lipoprotein receptor isoform 1
[Callithrix jacchus]
Length = 845
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 162/337 (48%), Gaps = 59/337 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C+ ++KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIEISKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVVGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGREPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQDIV---------------------V 145
NR I LE K D AQ + V
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 506
Query: 146 SGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+D V +A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWID 286
KSLE + TIF ++YWID
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWID 661
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 290 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIEISKVCNQEQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 350 EPLKECHVNECLVNN-------------GGCSHICKDLVVGYECDCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCKA-VGREPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 534 SKTISV----ATLDGTKRKFLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|332253109|ref|XP_003275692.1| PREDICTED: low-density lipoprotein receptor [Nomascus leucogenys]
Length = 747
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/308 (32%), Positives = 155/308 (50%), Gaps = 55/308 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLA--------ECKHKFGLCSNTCHPTPLGALCTCP 56
C++ + CDG DC + +DE C + EC G CS+ C+ +G C CP
Sbjct: 209 CIHSSWRCDGGPDCKDKSDE-ENCGMGGAGGGGTNECLDNNGGCSHVCNDLKIGYECLCP 267
Query: 57 PGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAA 116
G L C+D++EC+ P CSQ+C N +G Y C C EG+ L+ + CKA+ S A
Sbjct: 268 DGFQLVAQR-RCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHSKACKAVG-SIA 325
Query: 117 FLIISNRHSI------------LVADLE-----------------------------EKG 135
+LI +NRH + L+ +L ++
Sbjct: 326 YLIFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMIYSTQLDRA 385
Query: 136 KDHRAQDIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
+ D V+S L +GLA DWI +IYW DS L + V D G R L ++N ++P
Sbjct: 386 HGVSSYDTVISRDLQAPDGLAVDWIHSNIYWTDSVLGAVSVADTKGVKRKTLFRENGSKP 445
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
R +++DP G +++WTDWG +I + G++G + ++++ I WPNG+TLD+ + R+Y+
Sbjct: 446 RAIVVDPVHG--FMYWTDWGTPAKIRKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYW 503
Query: 255 ADSKLDFI 262
DSKL I
Sbjct: 504 VDSKLHCI 511
>gi|149057957|gb|EDM09200.1| similar to Low-density lipoprotein receptor-related protein 4
precursor (LDLR dan) (predicted) [Rattus norvegicus]
Length = 523
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 151/300 (50%), Gaps = 58/300 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C++ + VCDG+ DC +G+DEG C + C + LC ++C+ +P G++C C PG L ++
Sbjct: 138 CLSFSMVCDGREDCADGSDEGGECSSSMCSPE--LCYHSCYQSPTGSVCACAPGFELESN 195
Query: 65 SVTCQDMNECEQPG--YCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
C+D+NEC+QP CSQ C NT+GSYIC+C+ GY+L D HTCKA
Sbjct: 196 GQICRDVNECQQPSGQPCSQTCINTEGSYICACHPGYLLGSDGHTCKATGIKP------- 248
Query: 123 RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
+ + DWIG ++YW D R +I
Sbjct: 249 -----------------------------DCIGVDWIGRNLYWTDGRAGQILAIQLTAVG 279
Query: 183 R-----IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ V+ D++ QP+ + LDP G ++W++ GE PRIE+ GMDG++R +++ +
Sbjct: 280 KGKPEYTVVLDDDLIQPQSLALDPLNGL--MYWSEIGEEPRIEQAGMDGNSRKILVNQGL 337
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSL-----------EIKTNVNYSTIFRKLYWID 286
P + LD + +++++D K I +L +I++ + + K++W D
Sbjct: 338 GRPTSIALDQLSWKIFWSDEKFHCIGSVNLDGSGIRMMQLTQIQSPFSVAVFEDKVFWSD 397
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 15/163 (9%)
Query: 264 CKSLEIKTN-VNYSTIFRKLYWID-EGGNGVPLKIGKANMDGSNASILVSGQLYE--ALA 319
CK+ IK + + I R LYW D G + +++ ++++ L + +LA
Sbjct: 241 CKATGIKPDCIGVDWIGRNLYWTDGRAGQILAIQLTAVGKGKPEYTVVLDDDLIQPQSLA 300
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
LD NG++Y W++ GE PRIE+ GMDG++R +++ + P + LD +
Sbjct: 301 LDPLNGLMY-----------WSEIGEEPRIEQAGMDGNSRKILVNQGLGRPTSIALDQLS 349
Query: 380 RRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+++++D K I N DG+G + + L + F+ + D
Sbjct: 350 WKIFWSDEKFHCIGSVNLDGSGIRMMQLTQIQSPFSVAVFEDK 392
>gi|342360603|gb|AEL29830.1| very low density lipoprotein receptor, partial [Ficedula hypoleuca]
Length = 490
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 156/314 (49%), Gaps = 60/314 (19%)
Query: 28 CDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPGYCSQMCTN 86
C++ EC G CS+ C +G C CP G E+L D TC D++EC+ PG CSQ+C N
Sbjct: 6 CNINECLVNNGGCSHICRDLIIGYECDCPAGFELL--DRRTCGDIDECQNPGICSQICIN 63
Query: 87 TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI-------------------- 126
KG Y C C+ GY ++ CKA+ + LI +NR I
Sbjct: 64 LKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFTNRRDIRKIGLERKEYIQLVEQLRNS 122
Query: 127 --LVADLEEKG---KDHRAQDIVVSGLDLVE----------------GLAYDWIGGHIYW 165
L AD+ E+ D + I + +D + G+A DW+ +IYW
Sbjct: 123 IALDADIAEQKLYWADFSQKAIFSASVDTRDKVGTHIRILNNVHSPAGIAVDWVYKNIYW 182
Query: 166 LDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD 225
DS I V +GT R VL + +P + +DP G +++W+DWGE +IE+ GM+
Sbjct: 183 SDSTAKTISVASLDGTKRKVLFLSELREPASIAVDPISG--FMYWSDWGEPAKIEKAGMN 240
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC-------KSLEIKTNVNYS-- 276
G +R +++T+I WPNG+ LD+ R+Y+ DSKL + + + +K+++
Sbjct: 241 GFDRQQLVTTEIQWPNGIALDLVKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSHMFLPHP 300
Query: 277 ---TIFR-KLYWID 286
TIF ++YWID
Sbjct: 301 LALTIFEDRVYWID 314
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 92/183 (50%), Gaps = 33/183 (18%)
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST----------------IFRKLYWI 285
L DIA +++Y+AD I S++ + V +++ +YW
Sbjct: 124 ALDADIAEQKLYWADFSQKAIFSASVDTRDKVGTHIRILNNVHSPAGIAVDWVYKNIYWS 183
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDW 343
D + + A++DG+ +L +L E ++A+D +G +Y W+DW
Sbjct: 184 DSTAKTISV----ASLDGTKRKVLFLSELREPASIAVDPISGFMY-----------WSDW 228
Query: 344 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403
GE +IE+ GM+G +R +++T+I WPNG+ LD+ R+Y+ DSKL + + +G R+
Sbjct: 229 GEPAKIEKAGMNGFDRQQLVTTEIQWPNGIALDLVKSRLYWLDSKLHMLSSVDLNGQDRR 288
Query: 404 QVI 406
V+
Sbjct: 289 IVL 291
>gi|395843329|ref|XP_003794441.1| PREDICTED: low-density lipoprotein receptor-related protein 1B-like
[Otolemur garnettii]
Length = 2335
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 145/294 (49%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC++ +CD K DC +G+DE C + EC K CS C P+G C C PG L
Sbjct: 638 RCISSGHLCDNKDDCGDGSDES-NCHINECLSKKVSGCSQDCQDLPVGYKCKCWPGFQLK 696
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C EGY ++ DN + CK+++ FLI++
Sbjct: 697 DDGKTCVDIDECSSGFPCSQQCINTYGTYKCICTEGYEVQPDNPNGCKSLSDEEPFLILA 756
Query: 122 NRH--------------------SILVADLE-----------EKGKDHRAQDIVVSGLD- 149
+ H +++ D + + R + ++G D
Sbjct: 757 DHHELRKISTDGSNYTLLKQGLNNVIAIDFDYSEEFIYWIDSSRPNGSRINRMCLNGSDV 816
Query: 150 -------LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ LA DWIG ++YW D+ IEV NG +L + PR + LDP
Sbjct: 817 KVVHNTAVPNALAVDWIGKNLYWSDTEKRMIEVSKLNGLYPTILVSKRLKFPRDLSLDPQ 876
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +L+W D E P I R+GMDG+N+S +I TKI P LT+D R+Y+AD
Sbjct: 877 AG--YLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLYWAD 928
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 135/327 (41%), Gaps = 74/327 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSNT--CHPTPLGALCTCPPG 58
CV + CD DC +G+DE GC L+ C+ C + C+ C C PG
Sbjct: 1510 CVPMDLQCDQLDDCGDGSDE-QGCRLSSTEFTCEDNVNPCGDDAYCNQIKTSVFCRCKPG 1568
Query: 59 EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL 118
+ + C+D+NEC G CS C N +GSY C C++ + + N+TC A L
Sbjct: 1569 FQRNMKNRQCEDLNECLVFGTCSHQCINVEGSYKCVCDQNF--QERNNTCIAKGSEDQVL 1626
Query: 119 IISNRHSIL--------------VADLEEKGK-----DHRAQDIVV-------------- 145
I+N IL ++ +E + + +DI++
Sbjct: 1627 YIANDTDILGFIYPFNYSGDHQQISHIEHNSRITGMDVYYQRDIIIWSTQFNPGGIFYKR 1686
Query: 146 ----------SGLDLVE-----GLAYDWIGGHIYWLD-SRLN--------------RIEV 175
SGL E +A DWI G+IYW D SR++ I
Sbjct: 1687 IHGREKRQVNSGLICPEFKRPRDIAVDWIAGNIYWTDHSRMHWFSYYTTHWTSLRYSINA 1746
Query: 176 CDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST 235
NG N L + +P + ++P G ++WT G++ IE MDG+ R ++
Sbjct: 1747 GQLNGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVIGDHSHIEEAAMDGTLRRILVQK 1804
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D R+Y+AD +L I
Sbjct: 1805 NLQRPTGLAVDYFGERIYWADFELSVI 1831
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 156/426 (36%), Gaps = 81/426 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-----DLAECKHKFGLCSN-TCHPTPLGA--LCTCP 56
C+ ++C+G DC + +DE CK CSN C P L L C
Sbjct: 1465 CLQSEQMCNGIDDCGDNSDEDHCSGKLTYKARPCKKDEFACSNKNCVPMDLQCDQLDDCG 1524
Query: 57 PGE-----ILSNDSVTCQD-MNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110
G LS+ TC+D +N C YC+Q+ K S C C G+ N C+
Sbjct: 1525 DGSDEQGCRLSSTEFTCEDNVNPCGDDAYCNQI----KTSVFCRCKPGFQRNMKNRQCED 1580
Query: 111 INHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL 170
+N F S+ Q I V G +Y + +
Sbjct: 1581 LNECLVFGTCSH------------------QCINVEG-------SYKCVCDQNFQ----- 1610
Query: 171 NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS-NR 229
R C G+ VL N T G + + + N RI GMD R
Sbjct: 1611 ERNNTCIAKGSEDQVLYIANDTDILGFIYPFNYSGDHQQISHIEHNSRI--TGMDVYYQR 1668
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKL--DFIDCKSLEIKTNVNYSTIFRKLYWIDE 287
II + + P G I +R++ + + + C + ++ I +YW D
Sbjct: 1669 DIIIWSTQFNPGG----IFYKRIHGREKRQVNSGLICPEFKRPRDIAVDWIAGNIYWTDH 1724
Query: 288 GG-----------NGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKC 334
+ I ++G N + L++ E A+A++ + GM+Y
Sbjct: 1725 SRMHWFSYYTTHWTSLRYSINAGQLNGPNCTRLLTNMAGEPYAIAVNPKRGMMY------ 1778
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDF 394
WT G++ IE MDG+ R ++ + P GL +D R+Y+AD +L I
Sbjct: 1779 -----WTVIGDHSHIEEAAMDGTLRRILVQKNLQRPTGLAVDYFGERIYWADFELSVIGS 1833
Query: 395 CNYDGT 400
DG+
Sbjct: 1834 VLRDGS 1839
>gi|348523555|ref|XP_003449289.1| PREDICTED: low-density lipoprotein receptor-related protein 5
[Oreochromis niloticus]
Length = 1625
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 149/311 (47%), Gaps = 62/311 (19%)
Query: 111 INHSAAFLIISNRHSILVADLEEKG-------KDHRAQDIVVSGLDLVEGLAYDWIGGHI 163
+ +AA + + I D+ E+ + Q +VVSGLD +GLA DW+G +
Sbjct: 46 LEDAAAVDFLYSERLIFWTDVSEEAIKQTHWNQSSNCQTVVVSGLDSPDGLACDWLGKKL 105
Query: 164 YWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIG 223
YW DS NRIEV + +GT+R VL ++ QPR + L+P G R+++WTDWGE PRIER G
Sbjct: 106 YWTDSETNRIEVANLDGTSRKVLFWMDLDQPRAIALNP--GQRYMYWTDWGEEPRIERAG 163
Query: 224 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLY 283
MDGSNR I++ IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 164 MDGSNRKVIVNEDIYWPNGLTIDLVEQKLYWADAKLSFIH-------------------- 203
Query: 284 WIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
+AN+DGS +V G L AL L LY WTDW
Sbjct: 204 --------------RANLDGSARETVVEGTLTHPFALTLSEETLY-----------WTDW 238
Query: 344 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403
+ I +++ I + IY P +DI Y + D C+ D G
Sbjct: 239 -QTRSIHACSKHSGDKTREILSGIYSP----MDIQVLEPY---RQPDIQTPCSTDNGGCS 290
Query: 404 QVILIDLMVEF 414
+ L+ + F
Sbjct: 291 HLCLLSPVEPF 301
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 149/339 (43%), Gaps = 63/339 (18%)
Query: 33 CKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C G CS+ C +P+ C CP G L D TC+ EQ ++ + S
Sbjct: 282 CSTDNGGCSHLCLLSPVEPFYSCACPTGVQLKPDRKTCKP--GAEQVLLLARRTDLRRIS 339
Query: 91 YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD------IV 144
VL+ DN I H+ A + D E + + D +V
Sbjct: 340 LDLPDFTDIVLQVDN-----IRHAIAIDYDPVEGYVYWTDDEVRAIRRSSIDGSNATMLV 394
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ ++ +G+A DW+ ++YW D+ +RIEV NGT+R +L +N+ +PR ++LDP G
Sbjct: 395 TTEINHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILISENLEEPRAIVLDPVNG 454
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
+++WTDWGE+P+IER +DG+ R ++++ + WPNGL +D ++Y+ D+K D
Sbjct: 455 --YMYWTDWGEHPKIERANLDGTARLVLVNSSLGWPNGLAIDYTAGKLYWGDAKTD---- 508
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
KI ++DGSN L+ +L L
Sbjct: 509 ------------------------------KIEVISVDGSNRQTLLEDKLPHIFGFTLLG 538
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+Y WTDW + IER+ + R II
Sbjct: 539 DHIY-----------WTDW-QRRSIERVHKTTAVREIII 565
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 120/241 (49%), Gaps = 50/241 (20%)
Query: 184 IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
IVL DNI + DP G +++WTD E I R +DGSN + +++T+I P+G+
Sbjct: 348 IVLQVDNIRHAIAIDYDPVEG--YVYWTD-DEVRAIRRSSIDGSNATMLVTTEINHPDGI 404
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
+D + R LYW D G + +I ++G
Sbjct: 405 AVDW------------------------------VARNLYWTDTGTD----RIEVTRLNG 430
Query: 304 SNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
++ IL+S L E A+ LD NG +Y WTDWGE+P+IER +DG+ R
Sbjct: 431 TSRKILISENLEEPRAIVLDPVNGYMY-----------WTDWGEHPKIERANLDGTARLV 479
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++++ + WPNGL +D ++Y+ D+K D I+ + DG+ RQ ++ L F L+GD
Sbjct: 480 LVNSSLGWPNGLAIDYTAGKLYWGDAKTDKIEVISVDGSNRQTLLEDKLPHIFGFTLLGD 539
Query: 422 N 422
+
Sbjct: 540 H 540
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 140/312 (44%), Gaps = 70/312 (22%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C + + C+C G L D TC AFL+ +NR +I L D
Sbjct: 593 GGCSHLCFWRQQAVSCACPMGMELLSDLQTCVV---PEAFLLFTNRDNIRSISLGTNSND 649
Query: 138 ----------------------------------------HRAQDIVVSGLDLVEGLAYD 157
+ I+ GLD EG+A D
Sbjct: 650 VVIPVTGVKEASALDVYVYERRIYWTDIQAKTISRAYMNGSSVEHIIEFGLDYPEGMAVD 709
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNRIVLA-KD-----NITQPRGMMLDPSPGTRWLFWT 211
W+G +IYW D+ NRIEV +G R VL KD ++ PR + LDP+ G +++WT
Sbjct: 710 WMGHNIYWADTGTNRIEVARLDGQYRQVLVCKDLDNPRSLDNPRSLALDPANG--YMYWT 767
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE--- 268
+WG PRI R MDGS +T++ K+ NGLT+D R+Y+ D I+ +++
Sbjct: 768 EWGGRPRIARAYMDGSTITTLVD-KVGRANGLTIDYVDHRLYWTDLDTCMIESTNMQGLQ 826
Query: 269 ---IKTNVNYS---TIFRK-LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I ++ + T +R +YW D + ++ G N ++++ GQL L LD
Sbjct: 827 REIIVDDLPHPFGLTQYRDFIYWTDFNLRSIERADKRS---GYNRTVVLQGQL--ELMLD 881
Query: 322 LENGMLYYSTLK 333
+ ++++S+ +
Sbjct: 882 I---LVFHSSRQ 890
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 142/330 (43%), Gaps = 40/330 (12%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E D A+ ++V S L GLA D+ G +YW D++ ++IEV +G+NR L +D
Sbjct: 467 IERANLDGTARLVLVNSSLGWPNGLAIDYTAGKLYWGDAKTDKIEVISVDGSNRQTLLED 526
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS-------------TK 236
+ G L ++WTDW + IER+ + R II T+
Sbjct: 527 KLPHIFGFTL----LGDHIYWTDW-QRRSIERVHKTTAVREIIIDQLPDLMGLKATKVTE 581
Query: 237 IYWPNGLTLDIA--TRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
+ NG D + ++ + +E+ +++ + N +
Sbjct: 582 TFGTNGCAGDNGGCSHLCFWRQQAVSCACPMGMELLSDLQTCVVPEAFLLFTNRDNIRSI 641
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+G SN ++ + EA ALD+ +Y R ++WTD + I R M
Sbjct: 642 SLGT----NSNDVVIPVTGVKEASALDV---YVY------ERRIYWTDI-QAKTISRAYM 687
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
+GS+ II + +P G+ +D +Y+AD+ + I+ DG RQ ++ DL
Sbjct: 688 NGSSVEHIIEFGLDYPEGMAVDWMGHNIYWADTGTNRIEVARLDGQYRQVLVCKDL---- 743
Query: 415 TNDLMGDNGVPALALDLENGMLYYSTEGAE 444
N DN +LALD NG +Y++ G
Sbjct: 744 DNPRSLDNPR-SLALDPANGYMYWTEWGGR 772
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 137/352 (38%), Gaps = 58/352 (16%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S NEC G C+ +C T C C Y L D C + ++F
Sbjct: 881 DILVFHSSRQDGTNECTHNNGNCAHLCLATPAGAQCRCASHYTLNPDGRNCSS---PSSF 937
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L+ S + SI L E+ D + + + V ++YD + +YWLD R N D
Sbjct: 938 LLFSQKASISRMVLGEQSPD---IILPIHVMRNVRAVSYDPVERLVYWLDGRQNIRRARD 994
Query: 178 ENGTNRIVL---AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
+ + +++ A+ Q + LDP +R ++WT N I MDG +I
Sbjct: 995 DGAMSSMIVSSTAQPVDNQLHDLSLDPY--SRNIYWTCETTN-TINVKRMDGHTVGVVIK 1051
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
P + ++ +YF T V +
Sbjct: 1052 DDTDKPRAIVVNAEKGYMYF----------------TTVQERSA---------------- 1079
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
KI A++DG+ L + L +AL L+N + LFW D + RIE +
Sbjct: 1080 KIEGASLDGTERESLFTTGLIRPVALALDNKLGK---------LFWVD-ADLKRIESSDL 1129
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN-YDGTGRQQV 405
G+NR + + I P GLT + +Y+ D + I+ + G GR ++
Sbjct: 1130 TGANRIVLQDSNILQPMGLT--VLGDHLYWIDRQQQMIERVDKLTGDGRTRI 1179
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 96/228 (42%), Gaps = 48/228 (21%)
Query: 184 IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
I+L + R + DP R ++W D +N I R DG+ S I+S+
Sbjct: 958 IILPIHVMRNVRAVSYDPV--ERLVYWLDGRQN--IRRARDDGAMSSMIVSST------- 1006
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
D++L +++ R +YW E N + +K MDG
Sbjct: 1007 --------AQPVDNQLH-----------DLSLDPYSRNIYWTCETTNTINVK----RMDG 1043
Query: 304 SNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
+++ A+ ++ E G +Y++T++ + +IE +DG+ R +
Sbjct: 1044 HTVGVVIKDDTDKPRAIVVNAEKGYMYFTTVQ----------ERSAKIEGASLDGTERES 1093
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
+ +T + P L LD ++++ D+ L I+ + D TG +++L D
Sbjct: 1094 LFTTGLIRPVALALDNKLGKLFWVDADLKRIE--SSDLTGANRIVLQD 1139
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Query: 307 SILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 366
S ++ L +A A+D L R +FWTD E + SN T++ +
Sbjct: 39 SAIIVSDLEDAAAVDF---------LYSERLIFWTDVSEEAIKQTHWNQSSNCQTVVVSG 89
Query: 367 IYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ P+GL D +++Y+ DS+ + I+ N DGT R+ + +DL
Sbjct: 90 LDSPDGLACDWLGKKLYWTDSETNRIEVANLDGTSRKVLFWMDL 133
>gi|405959326|gb|EKC25377.1| Low-density lipoprotein receptor-related protein 2 [Crassostrea
gigas]
Length = 626
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 163/353 (46%), Gaps = 62/353 (17%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EI 60
+ +C+ + K+C +DCP G DEGP C C+ C C TP G +C C G +I
Sbjct: 58 SKQCIPIGKLCTETSDCPQGEDEGPTCSRTYCQQL--SCDFRCQATPTGGMCFCNTGYQI 115
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
D+ TC D NEC+ G C Q C N G Y C C GY+L +C++ A+ +
Sbjct: 116 DPRDNRTCIDYNECKTWGSCDQKCKNFDGYYTCGCYPGYILN-GKKSCRSTAPRASMRVF 174
Query: 121 -------------SNRHSIL----VADLE---------------------EKGKDHRAQD 142
N H ++ V D++ + K ++
Sbjct: 175 VAMEDHIFSMDGDGNDHKVVINGSVEDMDFDVYNNKMFWIDEASKKIFTIDLRKSTERKE 234
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+V+ L + +AYDWI ++Y +D R I+V D N ++ + DNI PR + +DP
Sbjct: 235 ILVNDLYKPQSIAYDWISQNLYLVDQRAKVIDVIDLNSQHQTNIISDNIQDPRALAIDPL 294
Query: 203 PGTRWLFWTDWGENP----RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
G +LF++D+G P RIER MDGS R +++ I P +T+D +R+++ DS+
Sbjct: 295 TG--YLFFSDYGRKPRHKTRIERAYMDGSKRFLLVNKDIIAPTSITVDAVNKRIFWTDSR 352
Query: 259 LDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGK 298
LD I ++I + + KL+W D+ GV LK+ K
Sbjct: 353 LDHIQTVDFSGRFRFTVLSSGIKIPNAIGLARFEDKLFWADDTKMGV-LKVNK 404
>gi|27923331|gb|AAO27569.1| vitellogenin receptor [Oreochromis aureus]
Length = 844
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 144/301 (47%), Gaps = 46/301 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ ++KVC+ DCP+ +DE C+ EC G CS+ C +G C C PG L
Sbjct: 327 ECIEMSKVCNKVRDCPDWSDEPIKECNFNECLLNNGGCSHICKDMVIGYECDCTPGLQLI 386
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC PG CSQ+C N KG Y C C+ G ++ CKA+ LI +N
Sbjct: 387 -DHKTCGDIDECMNPGICSQICINLKGGYKCECHNGDQMDPTTGVCKAVGKEPC-LIFTN 444
Query: 123 RHSILVADLEEK---------------GKDHRAQDI------------------------ 143
R I LE K D Q I
Sbjct: 445 RRDIRRLGLERKEYTQIVEQQRNAVALDADFDQQTIFWADLGQKAIYSTLLDKRVDVGTH 504
Query: 144 --VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
V+ + G+A DWI ++YW D I V NGT + VL + +P + +DP
Sbjct: 505 KKVIDNVQTPVGIAVDWIYKNLYWSDLGTKTISVASFNGTKQKVLFNRGLKEPADIAVDP 564
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+W+DWGE +IE+ GM+G +R +++T I WPNG+TLD+ R+Y+ DSKL
Sbjct: 565 LSG--FLYWSDWGEPAKIEKSGMNGVDRQVLVATDIQWPNGITLDLIKGRLYWVDSKLHM 622
Query: 262 I 262
+
Sbjct: 623 L 623
>gi|347963802|ref|XP_310672.5| AGAP000427-PA [Anopheles gambiae str. PEST]
gi|333467028|gb|EAA06264.6| AGAP000427-PA [Anopheles gambiae str. PEST]
Length = 1907
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 165/335 (49%), Gaps = 57/335 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCS-NTCHPTPLGA-LCTCPPGEILS 62
CV++T+VC+G DC +G+DEGPGC + K C+ TC P G +C C G
Sbjct: 267 CVDVTQVCNGADDCGDGSDEGPGCKVPADGCKALHCAPQTCKVLPDGKPVCLCGVGFRFE 326
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI--- 119
+ C D+NEC + G CSQ C NT GS+ C+C + + L D TC+ + + A ++
Sbjct: 327 PSAGRCVDVNECARYGLCSQGCINTPGSFRCTCIDQFHLMRDGRTCELSSGTEALMLYTT 386
Query: 120 --------ISNRHSILVA-------------------DLEEK----------GKDHRAQD 142
+++ H VA D+ K G D R Q
Sbjct: 387 QKAVGAMYLTSLHQYYVAKELSQVIGVAYDGSHVYWTDISHKTESIERSLEDGSD-RVQ- 444
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ +GL E +A DW+ G+IY+ DS I VC +G + + +D + +PRG+ L P
Sbjct: 445 LLTAGLISPEDIALDWLTGNIYFSDSGQMHIAVCSSDGYHCRAIVQDELHKPRGIALLPQ 504
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
GT LF++DWG N I R MDG+ + ++S I+WPNGLTLD +R+Y+ D+KL I
Sbjct: 505 NGT--LFYSDWGNNAMIGRARMDGTEQQVVVSDGIHWPNGLTLDWPNQRLYWIDAKLKRI 562
Query: 263 DCKSLE-----------IKTNVNYSTIFRKLYWID 286
+ + +K + + +LYW D
Sbjct: 563 ESMHFDGTDRVVVLDDVLKHPFSIAVFNDRLYWSD 597
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 132/296 (44%), Gaps = 48/296 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ + K+CDG+ DC NG DE C A C G C+ C +P G++C C G L+ D
Sbjct: 1341 CIPVAKLCDGRRDCTNGHDEEGACASA-CTGGLGPCAQICQKSPAGSICACLEGYELAGD 1399
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL------ 118
TC D+NEC + C+Q C N GSY C+C++G++L D +CK++ + L
Sbjct: 1400 RKTCTDVNECARGQPCAQQCANVHGSYRCACHDGFMLRPDKASCKSVGPAPHLLYTALDQ 1459
Query: 119 ---------------IISNRHSILVADLE----------EKGKDHRAQDI------VVSG 147
+ +N I DL+ E G D+ V++
Sbjct: 1460 VRQLTLQQPPRIDTVLRANGSRITALDLDVRQRRLYYAAENGAALYEHDLRTNETRVLAN 1519
Query: 148 LDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTR 206
+ + LA DW+ G++Y+ D+ ++VC G V + + + +DP R
Sbjct: 1520 VGRPDRLAVDWVAGNVYFADATEPSLKVCHFGRGACARVASFSQRNYVKAVAVDPV--NR 1577
Query: 207 WLF------WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+LF W + + R +DGS + I++ + + L +D + +Y+ +
Sbjct: 1578 YLFYALLFSWIFQVPHTIVYRARLDGSLQE-IVTKQAGIVSALAVDPQAQLLYYTE 1632
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 100/265 (37%), Gaps = 56/265 (21%)
Query: 80 CSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLI------ISNRH-------- 124
C+ +C T +Y C+C +G L D H+C ++ L+ ++ +H
Sbjct: 646 CTHLCLLTSNATYACACPQGMELSRDKHSCASVAKRQDILLGIGHYLVTIKHHPFGRHAT 705
Query: 125 ---------------------SILVADLEEKG------KDHRAQDIVVSGLDLVEGLAYD 157
+ VAD + R Q +V SG+ + LA+D
Sbjct: 706 GRGEPLPVATISRLAFNSLTGELFVADNSRRAIYTVELGSLRTQRLVRSGIGRITALAFD 765
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNR-IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
++ +YW D+ + IE+ +R I+ P + L P G ++ +
Sbjct: 766 YLSNTLYWSDAERSTIEIYSLQTRHRSIIQHYLGDDAPVALALIPETGKMFVALRSPSGH 825
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNG---LTLDIATRRVYFADSKLDFIDCKSLE----- 268
I+R M G T + + NG +D R V+++DS + I+ S E
Sbjct: 826 THIDRQDMTGRGPHTHVIEERLGSNGTISFAVDQDLRSVFWSDSGTNRIEITSFEGDTRH 885
Query: 269 -----IKTNVNYSTIFRKLYWIDEG 288
++ V+ + I +L+W G
Sbjct: 886 LFREYLREPVSLAIIGSELFWTCRG 910
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 17/128 (13%)
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPN 371
Q Y A L G+ Y + ++WTD IER DGS+R +++ + P
Sbjct: 400 QYYVAKELSQVIGVAYDGS-----HVYWTDISHKTESIERSLEDGSDRVQLLTAGLISPE 454
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDL 431
+ LD T +YF+DS I C+ DG + ++ ++L G+ AL
Sbjct: 455 DIALDWLTGNIYFSDSGQMHIAVCSSDGYHCRAIV--------QDELHKPRGI---ALLP 503
Query: 432 ENGMLYYS 439
+NG L+YS
Sbjct: 504 QNGTLFYS 511
>gi|301767446|ref|XP_002919140.1| PREDICTED: very low-density lipoprotein receptor-like [Ailuropoda
melanoleuca]
Length = 931
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 166/362 (45%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C+++ KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 388 ECIDIGKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFELI 447
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 448 --DKKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 504
Query: 122 NRHSILVADLEEKG-------------------------KDHRAQDIVVSGLDLVEG--- 153
NR I DLE K D + I + +D G
Sbjct: 505 NRRDIRKIDLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 564
Query: 154 -----------LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+A DW+ IYW D I V +GT R L + +P + +DP
Sbjct: 565 KIIDNVYNPAAIAVDWVYKTIYWTDVASKTISVATLDGTKRKFLFNSGLREPASIAVDPL 624
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 625 SG--FVYWSDWGEPAKIEKAGMNGFDRQPLVTEDIQWPNGITLDLIKSRLYWLDSKLHML 682
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KS E + TIF ++YWID V G GS L
Sbjct: 683 SSVDLNGQDRRIVLKSQEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELVTL 739
Query: 310 VS 311
V+
Sbjct: 740 VN 741
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 167/418 (39%), Gaps = 85/418 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC--KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ ++ C+G DC + +DE ++ +C KF S C +G +C
Sbjct: 348 CIHSSRRCNGIRDCVDRSDEVNCKNVNQCLGPGKFKCRSGEC--IDIGKVC--------- 396
Query: 63 NDSVTCQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI 111
N C+D +NEC G CS +C + Y C C G+ L D TC I
Sbjct: 397 NQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFEL-IDKKTCGDI 455
Query: 112 NHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN 171
+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 456 DECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCK-AVGKEPSLIFTNRR 507
Query: 172 RIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS 230
I D I L + Q R + LD + LFW D + D R
Sbjct: 508 DIRKIDLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRH 563
Query: 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN 290
I +Y P + +D +++ +YW D
Sbjct: 564 VKIIDNVYNPAAIAVDW------------------------------VYKTIYWTDVASK 593
Query: 291 GVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE +
Sbjct: 594 TISV----ATLDGTKRKFLFNSGLREPASIAVDPLSGFVY-----------WSDWGEPAK 638
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 639 IEKAGMNGFDRQPLVTEDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 696
>gi|390348468|ref|XP_003727007.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
[Strongylocentrotus purpuratus]
Length = 709
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 185/408 (45%), Gaps = 97/408 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG---CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
C+ + +VC+G +CPN DE PG C EC G CS+TC +G +CTC G L
Sbjct: 331 CLPMVRVCNGIPECPNNEDE-PGQEICGRNECLTNNGGCSHTCLDLAIGHVCTCNAGYTL 389
Query: 62 SNDSVTCQDMNECEQP-GYCSQMCTNTKGSYICSCNEGYVLE--YDNHTCKA-INHSAAF 117
N++ C D+NEC+ G CSQ C N GSY C C+E Y LE D CKA A
Sbjct: 390 VNET-QCVDINECKTTLGICSQRCYNLPGSYKCDCDENYTLENVNDRGHCKANPEFGAPK 448
Query: 118 LIISNRHSILVADLEEKGKDH--RAQDIVVS---------------GLDLV--------- 151
L+I+NRH I + D +D+ R+ V+ GL++V
Sbjct: 449 LLIANRHDIRIFDPSTSSEDYIKRSLHSAVAVEFDSASNTVFWTDVGLEVVSKTQLQAEN 508
Query: 152 --------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+G+A DWI +YW D+ ++ I V + GT VL N+ +PR +
Sbjct: 509 EVVPVVVTDKVKTPDGIAVDWINKLLYWTDTGVDNIVVSNFEGTRHTVLISSNLDEPRAI 568
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+DP G +FW+DWG IER GM+G R+ I++ + WPNGLTLD +Y+ D+
Sbjct: 569 AVDPESGL--MFWSDWGLG-VIERAGMNGQGRTAIVTEGVSWPNGLTLDYTLDMLYWIDA 625
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
K I C + G N ++V+GQ +
Sbjct: 626 KESSISC----------------------------------VDFMGGNRRVVVAGQGRIS 651
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
+S +++WTDW + IER GSN++TI+S
Sbjct: 652 HP---------FSIAVFEDYIYWTDWTKE-SIERADKFTGSNQTTILS 689
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 175/404 (43%), Gaps = 65/404 (16%)
Query: 12 CDGKTDCPNGADEGPGCDLAECK--HKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ 69
CDG C +G+DE AEC F ++TC P+ +C P E +N+ Q
Sbjct: 297 CDGTQQCADGSDEANCNAPAECNPTTHFKCSNSTC--LPMVRVCNGIP-ECPNNEDEPGQ 353
Query: 70 DM---NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHS 125
++ NEC G CS C + ++C+CN GY L + C IN L I ++
Sbjct: 354 EICGRNECLTNNGGCSHTCLDLAIGHVCTCNAGYTLVNETQ-CVDINECKTTLGICSQRC 412
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
+L K ++ + ++ + G L + + I + D + ++
Sbjct: 413 Y---NLPGSYKCDCDENYTLENVNDRGHCKANPEFGAPKLLIANRHDIRIFDPSTSSEDY 469
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
+ K ++ + D + T +FWTD G E ++ + +++ K+ P+G+
Sbjct: 470 I-KRSLHSAVAVEFDSASNT--VFWTDVGLEVVSKTQLQAENEVVPVVVTDKVKTPDGIA 526
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I + LYW D G + + + +N +G+
Sbjct: 527 VDW------------------------------INKLLYWTDTGVDNIVV----SNFEGT 552
Query: 305 NASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
++L+S L E A+A+D E+G++ FW+DWG IER GM+G R+ I
Sbjct: 553 RHTVLISSNLDEPRAIAVDPESGLM-----------FWSDWGLG-VIERAGMNGQGRTAI 600
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
++ + WPNGLTLD +Y+ D+K I ++ G R+ V+
Sbjct: 601 VTEGVSWPNGLTLDYTLDMLYWIDAKESSISCVDFMGGNRRVVV 644
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 66/134 (49%), Gaps = 21/134 (15%)
Query: 310 VSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTKIY 368
+ L+ A+A++ ++ + +FWTD G E ++ + +++ K+
Sbjct: 470 IKRSLHSAVAVEFDSA---------SNTVFWTDVGLEVVSKTQLQAENEVVPVVVTDKVK 520
Query: 369 WPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALA 428
P+G+ +D + +Y+ D+ +D I N++GT R V++ + E A+A
Sbjct: 521 TPDGIAVDWINKLLYWTDTGVDNIVVSNFEGT-RHTVLISSNLDEPR----------AIA 569
Query: 429 LDLENGMLYYSTEG 442
+D E+G++++S G
Sbjct: 570 VDPESGLMFWSDWG 583
>gi|328783152|ref|XP_001121707.2| PREDICTED: vitellogenin receptor [Apis mellifera]
Length = 1671
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 157/336 (46%), Gaps = 59/336 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKF-GLCSNTCHPTPLGALCTCPPGEIL 61
RC+ L C+ K DC + +DE C A+ K C + C TP GA C+C G L
Sbjct: 87 RCIFLNATCNEKNDCGDNSDEDLDACKKADASCKLTAKCEHNCRKTPKGAQCSCRSGYKL 146
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA----------- 110
+N+ TC D+NEC+ G C Q C N GSY C C GY+++ D TCKA
Sbjct: 147 TNNQ-TCTDINECDNYGICDQQCINNAGSYSCLCQPGYIMQDDKKTCKADGGEATMVFSI 205
Query: 111 --------------------INHSAAFLI---------ISNRHSILVADLEEKGKDHRAQ 141
+ H+ A + I N + ++ LE+ + +
Sbjct: 206 KSEIHGYYLDSQIYFPISRNLQHAVAVSLDANYIYWSDIENGNEAIIKSLEDGS---QRE 262
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
IV +GL+ + +A DW+ ++Y+ DS I VC+ +G+ V+ K+ +PRG+ L P
Sbjct: 263 VIVTTGLNSPDNIAVDWVTDNVYFTDSGYMHIGVCNNDGSYCTVIIKERRDKPRGLALLP 322
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
S G +WT+WG N I GMDG N + +++ + WPN L++D R+Y+ D+K
Sbjct: 323 SNGI--FYWTEWGMNSSILMAGMDGKNITVLVNQDLEWPNSLSIDYPNNRLYWIDTKQKV 380
Query: 262 IDCKSLE-----------IKTNVNYSTIFRKLYWID 286
I+ L+ K + + KLYW D
Sbjct: 381 IESIKLDGTDRRIVLKGIAKKPFSLAVFENKLYWSD 416
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 171/369 (46%), Gaps = 83/369 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ +KVCDGK DC + +DE C+++ K+ C+N CH TP G +C+C G LSND
Sbjct: 1120 CLPFSKVCDGKIDCSDQSDEFGDCEISCTKN--NPCTNMCHKTPTGPVCSCRNGYHLSND 1177
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
TC+D++EC+Q CSQ+C NT GS+ICSC EGYV+ D +CK +I+S+ H
Sbjct: 1178 LKTCEDIDECKQ-NICSQICHNTNGSFICSCYEGYVIRSDKTSCKVAGSQMEIIIVSDTH 1236
Query: 125 SILVA-------------DLEEKGKDHRAQD-----------------------IVVSGL 148
++ D E G D ++ V+GL
Sbjct: 1237 IRKLSSNLNSIEFIYKEIDFEINGIDVNTREDTIYWSNEMLGMINKIHVKTKERKTVTGL 1296
Query: 149 DLVEGLAYDWIGGHIYWLDSRL-NRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTR 206
E LA DWI ++Y+ ++ + IEVC+ E +++ + ++P G
Sbjct: 1297 GRPEALAVDWITDNVYFNNNDYSSSIEVCNLEQKKCAKIVSIAGKNHVISIAVEPRKG-- 1354
Query: 207 WLFW--TDWG--ENP--RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
WLFW T W + P +I R G+N + I+ + LT+D ++Y++D+
Sbjct: 1355 WLFWSQTSWAFYDRPMSKIYRSNTMGNNATAIVHLDLGLVLALTIDYTRSKLYWSDTHFK 1414
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
I+ +N+DGSN +++++ +++A+++
Sbjct: 1415 NIE----------------------------------SSNLDGSNRAVVLNTGIHQAMSI 1440
Query: 321 DLENGMLYY 329
++ LY+
Sbjct: 1441 NIYEDFLYW 1449
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 121/304 (39%), Gaps = 79/304 (25%)
Query: 80 CSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH 138
CSQ+C N++ Y C+C+ L YDNHTC+AI LII+ ++ + E GK
Sbjct: 466 CSQLCLLNSQNGYTCACSLDKELNYDNHTCRAI-KKKMHLIIAAGNTFIDYYHELLGKPK 524
Query: 139 RAQDIVVSGL----------------------------------------DLVEGLAYDW 158
A I++ + +++ G+ +D+
Sbjct: 525 MATSIMLKRVTAIAYNPLTGGLLASDQLTDTIFHLNTHIGEVKSIITIENEILGGMDFDY 584
Query: 159 IGGHIYWLDSRLNRIEVCDENGTNRIVLA-KDNITQPRGMMLDPSPGTRWLFWTDWGENP 217
IG ++Y D + IEV N + + KD +P + L P G + + G
Sbjct: 585 IGNNVYLSDVKHKTIEVHSLNSKQKTIFYFKD---EPYDIALVPEEGIMMVVFRSDGL-Y 640
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST 277
I+ + M+G + KI TL I K +++Y
Sbjct: 641 YIDLMNMNG------LGPKITIVGNKTLLIGP--------------------KISLSYDG 674
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRW 337
F++L+W D+G +IG + G IL +G L E ++L + L+++ K +
Sbjct: 675 DFKQLFWCDQGSG----RIGSTTIPGFETYILRTG-LSEPVSLAILGNYLFWTQYK-SNQ 728
Query: 338 LFWT 341
L+WT
Sbjct: 729 LYWT 732
>gi|410978055|ref|XP_003995412.1| PREDICTED: very low-density lipoprotein receptor [Felis catus]
Length = 959
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 168/362 (46%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C+++ KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 416 ECIDIGKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYACDCAAGFELI 475
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D C D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 476 --DKKICGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 532
Query: 122 NRHSILVADLEEKG--------KDHRAQDIVVSGLDLV---------------------- 151
NR I LE K ++ A D+ ++ L
Sbjct: 533 NRRDIRKIGLERKEYIQLVEQLRNTVALDVDIAAQKLFWADLSQKAIFSASIDDKVGRHV 592
Query: 152 ---------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+A DW+ IYW D+ I V +G R L ++ +P + +DP
Sbjct: 593 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGAKRKFLFNSDLREPASIAVDPL 652
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 653 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHML 710
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 711 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 767
Query: 310 VS 311
V+
Sbjct: 768 VN 769
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 90/181 (49%), Gaps = 31/181 (17%)
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI--------------FRKLYWIDE 287
L +DIA +++++AD I S++ K + I ++ +YW D
Sbjct: 559 ALDVDIAAQKLFWADLSQKAIFSASIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDA 618
Query: 288 GGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGE 345
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 619 ASKTISV----ATLDGAKRKFLFNSDLREPASIAVDPLSGFVY-----------WSDWGE 663
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V
Sbjct: 664 PAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIV 723
Query: 406 I 406
+
Sbjct: 724 L 724
>gi|390337147|ref|XP_782026.3| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Strongylocentrotus purpuratus]
Length = 1834
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 149/305 (48%), Gaps = 45/305 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+CV +++VCDG C +G+DE C + EC CS+TC T C C G +L++
Sbjct: 333 QCVAISQVCDGSVHCEDGSDER-FCGIDECMMNR-PCSDTCVDTLTSFKCMCNKGFVLAS 390
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D VTC D +EC CSQ+C NT GSYICSC GY L+ N +C ++I+NR
Sbjct: 391 DRVTCIDFDECTMTPICSQVCVNTPGSYICSCTTGYQLQ-SNGSCMRTTGEDPTVLIANR 449
Query: 124 HSILVADLEEKGK-------------------------------------DHRAQD---I 143
+ + D E D AQ+ I
Sbjct: 450 YYVRQFDTETPSDVNNIVAQDFEFAVALDYDIVDNKLFVSDVVANTIVRMDMNAQNREVI 509
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ VEG+A DW+G IY+ D +EV + +G +R VL + N+ + R + +DP
Sbjct: 510 IDDDAGSVEGIAVDWVGRKIYFSDRPRRILEVAEMDGRSRRVLKRTNLFEVRAVAVDPKH 569
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G ++WTDWG I R+GMDG+N I + I WPNG+T+D R+Y+ D+ LD I
Sbjct: 570 GN--MYWTDWGLRAYIGRMGMDGTNPIEIHNENIAWPNGITVDYTADRIYWTDAHLDHIS 627
Query: 264 CKSLE 268
LE
Sbjct: 628 FADLE 632
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 182/404 (45%), Gaps = 72/404 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDL-AECKHKFGLCSNTCHP-TPLGA-LCTCPPGEIL 61
CV + +C+G DC + DE GCD A C G C + C P + GA LC C G +L
Sbjct: 1179 CVPFSALCNGNNDCTDNYDE-LGCDKEATCSVNNGDCEHICTPISSAGAILCQCRQGYVL 1237
Query: 62 SNDSVTCQDMNECEQPGY-CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
+ D C D+NEC G+ C Q C+N+KG++ CSC+EGY + N++C A N + +LII
Sbjct: 1238 AEDGHNCVDVNECL--GFDCIQTCSNSKGTFRCSCSEGYTGQ--NNSCFA-NGATEYLII 1292
Query: 121 SNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI------- 173
S+ SI+ + D +D +V +EGL Y + +Y+ DS I
Sbjct: 1293 SDGQSII------RHVDG-GRDTIVDHQSRIEGLDYMFETNTLYFTDSESRSIKRHSLLY 1345
Query: 174 --EVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRST 231
++ EN LA DN+ P + +D W+ G N G+ S+RS
Sbjct: 1346 NSDIAPEN------LAVDNVYLPVDISVD------WI-----GRNIYFTDQGVTQSSRSK 1388
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL-----EIKTNVNYSTIFRKLYWID 286
S +I +A A + L+ + ++L E T+V + +YW D
Sbjct: 1389 RQSDQI---------VADPYPKIAVADLEGLHERTLTKENVEKPTSVAVNPRRGYIYWAD 1439
Query: 287 EGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWG 344
I A M+G N+ +++ L + L +D N +FW D+
Sbjct: 1440 MSSRVGNAFIAMAYMNGENSEKVITDGLIQPRGLTVDFSN----------DDRVFWVDFK 1489
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 388
N ++ + DGSNR T++S +Y P L++ + Y+ S
Sbjct: 1490 LN-ILQGMLFDGSNRKTLMSGALYNP--FHLEVFEDQFYWTASS 1530
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 110/478 (23%), Positives = 164/478 (34%), Gaps = 189/478 (39%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEG------PGCDLAECKHKF-----GLC---------SN 42
+RC+ CDG +C +G+DE CD +E +F GLC N
Sbjct: 1091 NRCIPEEFKCDGGNECGDGSDESREACLTSQCDTSE-GERFRCPSSGLCIWVDQLCDGYN 1149
Query: 43 TCHPTPLG-------ALCT----------CPPGEILSNDSVTCQDMNE---CEQPGYCS- 81
C + L CT C P L N + C D + C++ CS
Sbjct: 1150 NCGDSDLSDEQRCSTTACTADSFRCSGGDCVPFSALCNGNNDCTDNYDELGCDKEATCSV 1209
Query: 82 ------QMCT--NTKGSYICSCNEGYVLEYDNHTCKAINHSAAF---------------- 117
+CT ++ G+ +C C +GYVL D H C +N F
Sbjct: 1210 NNGDCEHICTPISSAGAILCQCRQGYVLAEDGHNCVDVNECLGFDCIQTCSNSKGTFRCS 1269
Query: 118 --------------------LIISNRHSIL--VADLEEKGKDHRAQDIVVSGLDLV---- 151
LIIS+ SI+ V + DH+++ + GLD +
Sbjct: 1270 CSEGYTGQNNSCFANGATEYLIISDGQSIIRHVDGGRDTIVDHQSR---IEGLDYMFETN 1326
Query: 152 -------------------------EGLAYD-----------WIGGHIYWLD------SR 169
E LA D WIG +IY+ D SR
Sbjct: 1327 TLYFTDSESRSIKRHSLLYNSDIAPENLAVDNVYLPVDISVDWIGRNIYFTDQGVTQSSR 1386
Query: 170 LNR------------IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE-- 215
R I V D G + L K+N+ +P + ++P G +++W D
Sbjct: 1387 SKRQSDQIVADPYPKIAVADLEGLHERTLTKENVEKPTSVAVNPRRG--YIYWADMSSRV 1444
Query: 216 -NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT-RRVYFADSKLDFIDCKSLEIKTNV 273
N I M+G N +I+ + P GLT+D + RV++ D KL N+
Sbjct: 1445 GNAFIAMAYMNGENSEKVITDGLIQPRGLTVDFSNDDRVFWVDFKL------------NI 1492
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYST 331
+F DGSN L+SG LY L++ Y++
Sbjct: 1493 LQGMLF----------------------DGSNRKTLMSGALYNPFHLEVFEDQFYWTA 1528
>gi|342360601|gb|AEL29829.1| very low density lipoprotein receptor, partial [Ficedula hypoleuca]
Length = 490
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 155/314 (49%), Gaps = 60/314 (19%)
Query: 28 CDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPGYCSQMCTN 86
C++ EC G CS+ C +G C CP G E+L D TC D++EC+ PG CSQ+C N
Sbjct: 6 CNINECLVNNGGCSHICRDLIIGYECDCPAGFELL--DRRTCGDIDECQNPGICSQICIN 63
Query: 87 TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI-------------------- 126
KG Y C C+ GY ++ CKA+ + LI +NR I
Sbjct: 64 LKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFTNRRDIRKIGLERKEYIQLVEQLRNS 122
Query: 127 --LVADLEEKG---KDHRAQDIVVSGLDLVE----------------GLAYDWIGGHIYW 165
L AD+ E+ D + I + +D + G+A DW+ +IYW
Sbjct: 123 IALDADIAEQKLYWADFSQKAIFSASVDTRDKVGTHIRILNNVHSPAGIAVDWVYKNIYW 182
Query: 166 LDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD 225
DS I V +GT R VL + P + +DP G +++W+DWGE +IE+ GM+
Sbjct: 183 SDSTAKTISVASLDGTKRKVLFLSELRGPASIAVDPISG--FMYWSDWGEPAKIEKAGMN 240
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC-------KSLEIKTNVNYS-- 276
G +R +++T+I WPNG+ LD+ R+Y+ DSKL + + + +K+++
Sbjct: 241 GFDRQQLVTTEIQWPNGIALDLVKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSHMFLPHP 300
Query: 277 ---TIFR-KLYWID 286
TIF ++YWID
Sbjct: 301 LALTIFEDRVYWID 314
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 91/183 (49%), Gaps = 33/183 (18%)
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST----------------IFRKLYWI 285
L DIA +++Y+AD I S++ + V +++ +YW
Sbjct: 124 ALDADIAEQKLYWADFSQKAIFSASVDTRDKVGTHIRILNNVHSPAGIAVDWVYKNIYWS 183
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTRWLFWTDW 343
D + + A++DG+ +L +L ++A+D +G +Y W+DW
Sbjct: 184 DSTAKTISV----ASLDGTKRKVLFLSELRGPASIAVDPISGFMY-----------WSDW 228
Query: 344 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403
GE +IE+ GM+G +R +++T+I WPNG+ LD+ R+Y+ DSKL + + +G R+
Sbjct: 229 GEPAKIEKAGMNGFDRQQLVTTEIQWPNGIALDLVKSRLYWLDSKLHMLSSVDLNGQDRR 288
Query: 404 QVI 406
V+
Sbjct: 289 IVL 291
>gi|157821815|ref|NP_001101313.1| low density lipoprotein-related protein 1B (deleted in tumors)
[Rattus norvegicus]
gi|149047875|gb|EDM00491.1| low density lipoprotein-related protein 1B (deleted in tumors)
(predicted) [Rattus norvegicus]
Length = 2922
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 141/294 (47%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +CD + DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 1609 RCIPRDGLCDNRDDCGDGSDEAK-CHINECLSKKISGCSQDCQDLPISYKCKCWPGFQLK 1667
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C EGY + DN C++++ FLI++
Sbjct: 1668 DDGKTCVDIDECSTGFPCSQQCINTYGTYKCRCTEGYETQPDNQNGCRSLSDEEPFLILA 1727
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
++H I L ++G D+R + I
Sbjct: 1728 DQHEIRKISTDGSNYTLLKQGLNNVIAIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDI 1787
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG VL + PR + LDP
Sbjct: 1788 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTVLVSKRLKFPRDLSLDPR 1847
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G L+W D E P I R+GMDG+N+S +I TKI P LT+D R+Y+AD
Sbjct: 1848 AGN--LYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLYWAD 1899
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 132/331 (39%), Gaps = 97/331 (29%)
Query: 93 CSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE-------------------- 132
CSC EG+ L+ D +C +++ AF+I S RH I DL
Sbjct: 4 CSCYEGWALDTDGESCISVDSFEAFIIFSIRHEIRRIDLHKGDYSLLVPGLRNTIALDFH 63
Query: 133 ----------------------EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL 170
E G + +V GL EGL DWI G+IYW+DS L
Sbjct: 64 FNQSLLYWTDVVEDRIYRGKLSESGGVSAIEVVVEHGLATPEGLTVDWIAGNIYWIDSNL 123
Query: 171 NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN-PRIERIGMDGSNR 229
++IEV +G+ R L + PR + LDP G LFWTDW N PRIE M G+ R
Sbjct: 124 DQIEVSKLDGSLRATLIAGAMEHPRAIALDPRYGI--LFWTDWDANFPRIESASMSGAGR 181
Query: 230 STIIS--TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDE 287
TI WPNGLT+D RR+ + D++ D I YS +
Sbjct: 182 KTIYKDMKTGAWPNGLTVDHFERRIVWTDARSDAI------------YSAFY-------- 221
Query: 288 GGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
DG+N ++ G Y + + LY S ++WTDW N
Sbjct: 222 --------------DGTNMIEIIRGHEYLSHPFAVS---LYGSE------VYWTDWRTNT 258
Query: 348 RIERIGMDGSNRSTIIST-------KIYWPN 371
+ G N S I T +IY P+
Sbjct: 259 LAKANKWTGQNVSVIQKTSAQPFDLQIYHPS 289
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 106/227 (46%), Gaps = 48/227 (21%)
Query: 69 QDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
Q N C+ G CSQ+C T + + C C GY L+ + +C+ + +FL+ S I
Sbjct: 600 QGSNSCQVNNGGCSQLCLPTSETTRTCMCTVGYYLQKNRMSCQGVE---SFLMYSVHEGI 656
Query: 127 LVADLEEKGK----------------DHRAQ-------------------------DIVV 145
LE + K D A+ DIV
Sbjct: 657 RGISLEPRDKVDALMPISGAAFAVGIDFHAENDTIYWTDMGLNKISRAKRDQTWKEDIVT 716
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + + P G
Sbjct: 717 NGLGRVEGIAIDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIAVHPEKG- 775
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
+LFWT+WG+ P I + +DGS + I+S I WPNG+++D R+
Sbjct: 776 -FLFWTEWGQVPCIGKARLDGSEKVMIVSMGITWPNGISIDYEIERI 821
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 133/330 (40%), Gaps = 80/330 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNT---------CHPTPLGALCTC 55
C+ + CDG DC +G+DE GC +H C N C+ C C
Sbjct: 2481 CIPMELQCDGLDDCGDGSDE-QGCMQTPTQHT---CENNGNPCGDDAYCNQIRTSVFCRC 2536
Query: 56 PPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA 115
PG + C D+NEC G CSQ C NT+GSY C C++ + + N++C A
Sbjct: 2537 KPGFQRNIKGRECADLNECLVFGICSQHCLNTRGSYKCVCDQNF--QEKNNSCIAKGSED 2594
Query: 116 AFLIISNRHSIL--------------VADLEEKGK------------------------- 136
L I+N IL ++ +E +
Sbjct: 2595 QALYIANDTDILGFVYPFNYSGSHQQISHVEHNSRITGMDVYYQRNVIVWSTQFNPGGIF 2654
Query: 137 ----DHRAQDIVVSGLDLVE-----GLAYDWIGGHIYWLD-SRLN--------------R 172
D R + SGL E +A DW+ G++YW D SR++
Sbjct: 2655 YTMIDAREKRQANSGLICPEFKRPRDIAVDWVTGNVYWTDHSRMHWFSYYTTHWTSLRYS 2714
Query: 173 IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI 232
I V NG N L + +P + ++P G ++WT G++ IE MDG+ R +
Sbjct: 2715 INVGQLNGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVIGDHSHIEEAAMDGTLRRIL 2772
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ + P GLT+D R+Y+AD +L I
Sbjct: 2773 VQKHLQRPTGLTVDHFGERIYWADFELSII 2802
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G N ++ST I PNGLT+D ++YF+D L
Sbjct: 1081 ECQNLMFWTNWNEQHPSIMRATLTGKNAHVVVSTDILTPNGLTIDHRAEKLYFSDGSLGK 1140
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 1141 IERCEYDGSQRHVIV 1155
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 128/336 (38%), Gaps = 59/336 (17%)
Query: 75 EQPGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEE 133
E G CS +C N S C+C L D TC + FL+ + R I D++
Sbjct: 302 EGRGPCSHLCLINHNRSAACACPHLMKLSSDKKTCYEMK---KFLLYARRSEIRGVDIDN 358
Query: 134 KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
+ V +D V + +D +YW D + I NGT + +I
Sbjct: 359 PYANFITA-FTVPDIDDVAVIDFDASEERLYWTDIKTQTITRAFINGTGLETVISRDIQS 417
Query: 194 PRGMMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
RG+ +D +R L+W + + +I +DGS +++II
Sbjct: 418 IRGLAVDWV--SRNLYWISSEFDETQINVARLDGSLKTSII------------------- 456
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+D C + + KLYW D GN + + ANMDGSN+ IL
Sbjct: 457 ----HGIDKPQCLAAH--------PVRGKLYWTD--GNTINM----ANMDGSNSKILFQN 498
Query: 313 QLYE-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
Q L++D LY W G N I R +DG N I S K
Sbjct: 499 QKEPVGLSIDYVENKLY-----------WISSG-NGTINRCNLDGGNLEVIESMKEELTK 546
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
L I +++++AD L + CN GR IL
Sbjct: 547 ATALTIMDKKLWWADQNLAQLGTCN-KRDGRNPSIL 581
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 89/242 (36%), Gaps = 54/242 (22%)
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI--EVCDENGTNRI----VLAKDNIT 192
+ ++V + VEGLAY +YW S + I D+ I V+
Sbjct: 1013 EGRQVIVENVGSVEGLAYHRAWDTLYWTSSSTSSITRHTVDQTQPGAIDREAVITMSEDD 1072
Query: 193 QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
P + LD +FWT+W E +P I R + G N ++ST I PNGLT+D +
Sbjct: 1073 HPHVLALDECQNL--MFWTNWNEQHPSIMRATLTGKNAHVVVSTDILTPNGLTIDHRAEK 1130
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+YF+D L KI + DGS ++V
Sbjct: 1131 LYFSDGSLG----------------------------------KIERCEYDGSQRHVIVK 1156
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
L+L + + ++FW+DWG + G + S + P
Sbjct: 1157 SGPGTFLSLAVYDN-----------YIFWSDWGRRAILRSNKYTGGETKVLRSDIPHQPM 1205
Query: 372 GL 373
G+
Sbjct: 1206 GI 1207
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 8/119 (6%)
Query: 125 SILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
SI+ A L K A +V + + GL D +Y+ D L +IE C+ +G+ R
Sbjct: 1097 SIMRATLTGKN----AHVVVSTDILTPNGLTIDHRAEKLYFSDGSLGKIERCEYDGSQRH 1152
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
V+ K G L + ++FW+DWG + G + S + P G+
Sbjct: 1153 VIVKSG----PGTFLSLAVYDNYIFWSDWGRRAILRSNKYTGGETKVLRSDIPHQPMGI 1207
>gi|292606975|gb|ADE34166.1| vitellogenin receptor [Nilaparvata lugens]
Length = 1931
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/360 (31%), Positives = 169/360 (46%), Gaps = 59/360 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++++ +C+ K DC +G+DEG C + +C K C +P G +C C G +
Sbjct: 226 CIDISALCNNKRDCFDGSDEGGLCHEKIDCNGKANCSIEQCFQSPSGQICLCSKG--YKH 283
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ C D++EC++ G C Q C+N G + CSC+ GY L+ D HTC+A + S
Sbjct: 284 DNGVCVDIDECKEFGICDQKCSNLVGGFRCSCDPGYALQKDGHTCRAEGGKEPLIYFSLG 343
Query: 124 HSILVADLE-----------------EKGKDH--------------RAQD-------IVV 145
I V L+ E H RAQ IV
Sbjct: 344 REIRVRFLKSGMYHAVARNLSQAIGVEVQGHHVYWTNIYEGDEMIVRAQQLGAERMPIVT 403
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL E LA DW+ G+IY+ DS + I VC + ++ VL +I PRG+ L P G
Sbjct: 404 AGLREPEDLAVDWVTGNIYFTDSGMKMIGVCCADASHCAVLHNRDINNPRGIALLPYEG- 462
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC- 264
+++W+DWG I R GMDGS+ +S + WPNG+T+D +R+Y+ D+K+ I+
Sbjct: 463 -YMYWSDWGNRSVIARSGMDGSDVFEFVSENLGWPNGITIDHGNQRLYWVDAKMTTIESI 521
Query: 265 --------KSLEIKTNVNYS-TIFR-KLYWIDEGGNGVPLKIGKAN-MDGSNASILVSGQ 313
K LE YS +F +YW D LKI AN G N +V +
Sbjct: 522 RLDGTDRRKVLERAVVHPYSIAVFEDTIYWSDWDS----LKIESANKFTGKNRKTVVQDK 577
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 151/336 (44%), Gaps = 60/336 (17%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
A C++ KVC+ + DC +G+DEG CD C+ CS+TC TP G CTCP G L
Sbjct: 1321 ASECIHTDKVCNNEKDCSDGSDEGGMCDKG-CES--AGCSDTCQRTPHGPKCTCPQGFEL 1377
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEG-YVLEYDNHTCKAINHSAAFL-- 118
S D+ TC D++EC YCSQ C+NT G++ CSC YVL + +CKA F+
Sbjct: 1378 SGDAKTCVDIDECATEEYCSQYCSNTPGAFRCSCKAPEYVLRENGMSCKAKGGEMQFIYS 1437
Query: 119 ------IISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNR 172
+S HS L + D+RA+ V GL D H+YW + +
Sbjct: 1438 VYNEIRTMSGWHSYL--GIVHSDPDYRAR---------VAGLTADVARKHVYWTTTTND- 1485
Query: 173 IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW--------------------LFWTD 212
V + NR ++ +I +P + +D G + L+ +D
Sbjct: 1486 -SVFQISMDNRRMIRSAHIIRPSRLAIDWITGNVYVVEAATQITAVNFEKRTHARLYKSD 1544
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD---SKLDFIDCKSLEI 269
++ IE + +D R+ ++W L I +Y AD S L I +L+
Sbjct: 1545 PAKD--IEALAVDPVTRT------MFWSERLAHKIQFSAIYRADTSGSGLLEIVSTNLKQ 1596
Query: 270 KTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305
+++ + +YW+D K+ +A+ DGSN
Sbjct: 1597 VSDIFVDSFHAHIYWVDSQTR----KVERASFDGSN 1628
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 90/218 (41%), Gaps = 53/218 (24%)
Query: 91 YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH------------ 138
Y C+C +G L +NH+C L+I NR +L ++ G+ H
Sbjct: 630 YSCACPDGKQLAANNHSCIETEKKQE-LVIGNRDRLLSYQHKQLGRVHIEELPLDQGNAM 688
Query: 139 ----------------------------------RAQDIVVSGLDLVEGLAYDWIGGHIY 164
+A+DIV +G+ +EG+A+D +G +IY
Sbjct: 689 IGDISALQYNSQDGSLIVGDSYNRKMSSVDLKTLQARDIVTTGVGRIEGIAFDNLGSNIY 748
Query: 165 WLDSRLNRIEVCDE-NGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIG 223
W DS L ++EV + N + ++ PRG+ + PS G ++ T I+++
Sbjct: 749 WTDSELGKVEVINTINHHRKTIMNHLQGDIPRGIAVIPSEGIMYVSLTS-PTTAHIDKLS 807
Query: 224 M---DGSNRSTIISTKIYWPN-GLTLDIATRRVYFADS 257
M D +R+ I + P L D R+Y+ADS
Sbjct: 808 MASGDVMSRTHIFEENLRGPFIPLFYDGMLHRMYWADS 845
>gi|332020358|gb|EGI60779.1| Vitellogenin receptor [Acromyrmex echinatior]
Length = 552
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 158/342 (46%), Gaps = 62/342 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ L VC+GK DC + +DE C + C C + C T G +C C PG L ND
Sbjct: 124 CIPLKLVCNGKDDCGDKSDE-IDCTSSSCPKSIK-CDHECTLTSKGNICFCKPGYKLQND 181
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
+ TC D++EC+ G C Q C N+ GSY C C Y L+ DN TCKA A ++ S +
Sbjct: 182 NRTCIDIDECQTYGICDQECVNSPGSYSCKCQTDYFLQEDNKTCKA--SGRAKILFSTKT 239
Query: 125 SILVADLEEKGK-----------------------------------------DHRAQDI 143
I+ L EK + +++
Sbjct: 240 EIIGMYLTEKNDIEFFNKLTFSNHLISIAVNDEHIYFSKLIGVNEVISKNILMSNMYENV 299
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG--TNRIVLAKDNITQPRGMMLDP 201
V +GL + +A DWI ++Y+ D ++N I +C G TN VL DNI QP G+ L P
Sbjct: 300 VTAGLSRISAMAVDWITENLYFTD-KINHIGICKFIGIYTNCTVLI-DNIDQPMGIALLP 357
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
+ G ++W DW NP I GMDG N +S I P LT+D T R+Y+ D KL
Sbjct: 358 TRGK--MYWCDWSSNPHIAVAGMDGKNIRVFVSENIKAPKSLTIDYQTDRLYWVDFKLRT 415
Query: 262 IDCKSLE------IKTNVNYS----TIFR-KLYWIDEGGNGV 292
I+ L+ + N+ Y+ IF KLYWID N +
Sbjct: 416 IESIRLDGTDRRFVLHNITYNPFTLAIFENKLYWIDMKSNAI 457
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 38/69 (55%)
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
++W DW NP I GMDG N +S I P LT+D T R+Y+ D KL I+
Sbjct: 362 MYWCDWSSNPHIAVAGMDGKNIRVFVSENIKAPKSLTIDYQTDRLYWVDFKLRTIESIRL 421
Query: 398 DGTGRQQVI 406
DGT R+ V+
Sbjct: 422 DGTDRRFVL 430
>gi|281349309|gb|EFB24893.1| hypothetical protein PANDA_007732 [Ailuropoda melanoleuca]
Length = 837
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 166/362 (45%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C+++ KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 303 ECIDIGKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFELI 362
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 363 --DKKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 419
Query: 122 NRHSILVADLEEKG-------------------------KDHRAQDIVVSGLDLVEG--- 153
NR I DLE K D + I + +D G
Sbjct: 420 NRRDIRKIDLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 479
Query: 154 -----------LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+A DW+ IYW D I V +GT R L + +P + +DP
Sbjct: 480 KIIDNVYNPAAIAVDWVYKTIYWTDVASKTISVATLDGTKRKFLFNSGLREPASIAVDPL 539
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 540 SG--FVYWSDWGEPAKIEKAGMNGFDRQPLVTEDIQWPNGITLDLIKSRLYWLDSKLHML 597
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KS E + TIF ++YWID V G GS L
Sbjct: 598 SSVDLNGQDRRIVLKSQEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELVTL 654
Query: 310 VS 311
V+
Sbjct: 655 VN 656
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 167/418 (39%), Gaps = 85/418 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC--KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ ++ C+G DC + +DE ++ +C KF S C +G +C
Sbjct: 263 CIHSSRRCNGIRDCVDRSDEVNCKNVNQCLGPGKFKCRSGEC--IDIGKVC--------- 311
Query: 63 NDSVTCQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI 111
N C+D +NEC G CS +C + Y C C G+ L D TC I
Sbjct: 312 NQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFEL-IDKKTCGDI 370
Query: 112 NHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN 171
+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 371 DECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCKA-VGKEPSLIFTNRR 422
Query: 172 RIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS 230
I D I L + Q R + LD + LFW D + D R
Sbjct: 423 DIRKIDLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRH 478
Query: 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN 290
I +Y P + +D +++ +YW D
Sbjct: 479 VKIIDNVYNPAAIAVDW------------------------------VYKTIYWTDVASK 508
Query: 291 GVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE +
Sbjct: 509 TISV----ATLDGTKRKFLFNSGLREPASIAVDPLSGFVY-----------WSDWGEPAK 553
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 554 IEKAGMNGFDRQPLVTEDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 611
>gi|281353403|gb|EFB28987.1| hypothetical protein PANDA_010246 [Ailuropoda melanoleuca]
Length = 1583
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 126/245 (51%), Gaps = 48/245 (19%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + L
Sbjct: 70 VQNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIAL 129
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 130 DPAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKL 187
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
FI +AN+DGS +V G L A
Sbjct: 188 SFIH----------------------------------RANLDGSFRQKVVEGSLTHPFA 213
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L L LY WTDW G R I+S +Y P + + +
Sbjct: 214 LTLSGDTLY-----------WTDWQTRSIHACNKRTGEKRKEILSA-LYSPMDIQVLSSE 261
Query: 380 RRVYF 384
R+ YF
Sbjct: 262 RQPYF 266
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 149/356 (41%), Gaps = 89/356 (25%)
Query: 49 LGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNH 106
L AL + ++LS++ E G CS +C + + Y C+C G L+ +
Sbjct: 246 LSALYSPMDIQVLSSERQPYFHTRCAEDNGGCSHLCLLSPREPFYTCACPTGVQLQDNGK 305
Query: 107 TCKAINHSAAFL----------------------IISNRHSILV-----------ADLEE 133
TCKA L + RH+I + D E
Sbjct: 306 TCKAGAEEVLLLARRTDLRRISLDTPDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEV 365
Query: 134 KGKDHR------AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
+ AQ +V + ++ +G+A DW+ ++YW D+ +RIEV NGT+R +L
Sbjct: 366 RAIRRAYLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILV 425
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+++ +PR ++L P G ++WTDWGENP+IE +DG R +++T + WPNGL LD+
Sbjct: 426 SEDLDEPRAIVLHPVMGL--MYWTDWGENPKIECAHLDGQERHILVNTSLGWPNGLALDL 483
Query: 248 ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307
++Y+ D+K D KI N+DG+
Sbjct: 484 QEGKLYWGDAKTD----------------------------------KIEVINVDGTKRR 509
Query: 308 ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L+ +L L +Y WTDW + IER+ ++R II
Sbjct: 510 TLLEDKLPHIFGFTLLGDFIY-----------WTDW-QRRSIERVHKVKASRDVII 553
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 89 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 137
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 138 ----WTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 193
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 194 NLDGSFRQKVVEGSLTHPFALTLSGD 219
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 117/247 (47%), Gaps = 30/247 (12%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
C K G CS+ C TP C CP G E+LS DM C P +
Sbjct: 576 CADKNGGCSHLCFFTPRATKCGCPIGLELLS-------DMKTCIVPEAFLVFTSRAAIHR 628
Query: 92 ICSCNEGYVLEYDNHTCK----AINHSAAF-LIISNRHSILVADLEEKGKDH------RA 140
I LE +N+ + ++A +SN H I D+ K
Sbjct: 629 IS-------LETNNNDVAIPLTGVKEASALDFDVSNNH-IYWTDVSLKTISRAFMNGSSV 680
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ ++ GLD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR + LD
Sbjct: 681 EHVIEFGLDYPEGMAVDWVGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALD 740
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WT+WG PRI R MDG+N T++ K+ N LT+D +R+Y+ D +
Sbjct: 741 PTKG--YIYWTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYVDQRLYWTDLDTN 797
Query: 261 FIDCKSL 267
I+ +
Sbjct: 798 MIESSDM 804
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E I+
Sbjct: 626 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIE 685
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 686 FGLDYPEGMAVDWVGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 741
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D +R+
Sbjct: 742 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYVDQRL 789
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ + D G+++V++ D
Sbjct: 790 YWTDLDTNMIE--SSDMLGQERVVIAD 814
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 140/347 (40%), Gaps = 69/347 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C AF
Sbjct: 862 DILVFHSSRQDGLNDCMHNNGQCGQLCLAIPGGHRCGCASHYTLDPTSRNCSP---PTAF 918
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+++ GL V+ + YD + IYW+D R N I
Sbjct: 919 LLFSQKCAISRMIPD------DQHSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQN-I 971
Query: 174 EVCDENGTNR--IVLAKDNITQ-----PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226
+ ++GT VL + +Q P + +D +R LFWT N I ++G
Sbjct: 972 KRAKDDGTQASPFVLTSPSQSQNPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLNG 1028
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWID 286
++ P + ++ +YF + + D
Sbjct: 1029 DAMGVVLRGDRDKPRAIVVNAERGYLYFTNMQ---------------------------D 1061
Query: 287 EGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
KI +A +DG+ +L + L +AL ++N + LFW D +
Sbjct: 1062 RAA-----KIERAALDGTEREVLFTTGLIRPVALVVDNRLGK---------LFWVD-ADL 1106
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
RIE + G+NR T+ I P GLT + + +Y+ D + I+
Sbjct: 1107 KRIESCDLSGANRLTLEDANIVQPVGLT--VLGKHLYWIDRQQQMIE 1151
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 148/357 (41%), Gaps = 62/357 (17%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 147 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 206
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + + +
Sbjct: 207 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGEKRKEILSA-LYSPMDIQVLSSE 261
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI-GKANMDGSNAS 307
R+ YF D C L + + R+ ++ GV L+ GK G+
Sbjct: 262 RQPYFHTRCAEDNGGCSHLCLLSP-------REPFYTCACPTGVQLQDNGKTCKAGAEEV 314
Query: 308 ILVSGQL-YEALALDLENGMLYYSTLKCTR------------WLFWTDWGENPRIERIGM 354
+L++ + ++LD + + R +++WTD E I R +
Sbjct: 315 LLLARRTDLRRISLDTPDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTD-DEVRAIRRAYL 373
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL---- 410
DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 374 DGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPR 433
Query: 411 --MVEFTNDLM-----GDN---------------------GVP-ALALDLENGMLYY 438
++ LM G+N G P LALDL+ G LY+
Sbjct: 434 AIVLHPVMGLMYWTDWGENPKIECAHLDGQERHILVNTSLGWPNGLALDLQEGKLYW 490
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N +L +N A +E D ++++ +GL L
Sbjct: 1032 GVVLRGDRDKPRAIVVNAERGYLYFTNMQD-RAAKIERAALDGTEREVLFTTGLIRPVAL 1090
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + + L+W D
Sbjct: 1091 VVDNRLGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPVGLTV----LGKHLYWID-R 1145
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T + ++ G+
Sbjct: 1146 QQQMIERVEKTTGDKRTRVQGRVAHLTGI 1174
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 26/140 (18%)
Query: 306 ASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTI 362
++++VSG L +A A+D + G +Y WTD E + + G +
Sbjct: 26 STVVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGVAVQNV 73
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 74 VISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------D 122
Query: 423 GVPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 123 QPRAIALDPAHGYMYWTDWG 142
>gi|270016386|gb|EFA12832.1| hypothetical protein TcasGA2_TC004260 [Tribolium castaneum]
Length = 1751
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/405 (30%), Positives = 182/405 (44%), Gaps = 92/405 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++ VC+ +DC + +DE C++ EC K + C + C T G C C G L
Sbjct: 915 CIDGHLVCNKVSDCADDSDEPLHCNVDECAKVEIHQCGHKCVDTLTGYYCECNAGYKLLQ 974
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYV-LEYDNHTCKAINHSAAFLIIS 121
D C D++EC E PG CSQ C+NT GS+ C CNE Y E D HTCK + ++I +
Sbjct: 975 DGKACADIDECVETPGVCSQYCSNTPGSFYCKCNEQYYEREPDEHTCKRKDTVEPWIIFT 1034
Query: 122 NRHSILVADLEEKGKDHRAQDIV-VSGLDL------------------------------ 150
N++ I ++ + + QD++ V LD
Sbjct: 1035 NKYYIRNMSIDARVYNLVHQDLMNVVALDYDMMDQKMYFCDVTAKTIYRSPIGSPEKEPI 1094
Query: 151 -------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+EG++ DWIG IYWLD ++V + +GTNR L K +I PR +++ P
Sbjct: 1095 IRHDSHGLEGISIDWIGRKIYWLDRHSKNLDVSELDGTNRKTL-KTSINDPRAVVV--HP 1151
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L++T W I ++GMDGSN +TI++ I WPN LT+D T R+Y+AD+ LD+
Sbjct: 1152 GIGYLYFTSWHLQAYIGKLGMDGSNFTTILTWEDDIAWPNALTIDFFTDRLYWADAHLDY 1211
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG-QLYEALAL 320
I +++DG N I++SG + AL
Sbjct: 1212 ----------------------------------IAMSDLDGKNRHIVISGSSVPHVFAL 1237
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
L + +Y WTDW DG N + +T
Sbjct: 1238 SLFDDYIY-----------WTDWNLKAISRANKFDGKNLQILRNT 1271
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 43/201 (21%)
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
K+ ++I+ G++ EG+AYDW IYW DS + I + +G++ +++A+ + +PR
Sbjct: 270 KNTDIKNIISRGIN-PEGIAYDWTQKKIYWTDSSNHSIYAMNLDGSHLVMIAR--VERPR 326
Query: 196 GMMLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
+++DP GT L++TDWG+ N +I R M GS + II + P+GL +D
Sbjct: 327 AIVIDPCNGT--LYYTDWGKFGTNGKIIRTTMAGSLKRVIIDKNLAQPSGLAIDYED--- 381
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+KLYW D V KI +A++DG N +LVS
Sbjct: 382 ---------------------------KKLYWTD----AVREKIERADLDGQNREVLVSA 410
Query: 313 QLYEALALDLENGMLYYSTLK 333
+Y ++ + +Y++ L+
Sbjct: 411 TIY-PFSITVYGDYIYWTDLQ 430
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 16/131 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRW 337
I RK+YW+D + + + +DG+N L + + + A+ + G+ Y
Sbjct: 1110 IGRKIYWLDRHSKNLDV----SELDGTNRKTLKTS-INDPRAVVVHPGIGY--------- 1155
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
L++T W I ++GMDGSN +TI++ I WPN LT+D T R+Y+AD+ LD+I
Sbjct: 1156 LYFTSWHLQAYIGKLGMDGSNFTTILTWEDDIAWPNALTIDFFTDRLYWADAHLDYIAMS 1215
Query: 396 NYDGTGRQQVI 406
+ DG R VI
Sbjct: 1216 DLDGKNRHIVI 1226
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 13/149 (8%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+ Y +K+YW D + I N+DGS+ ++ + A+ +D NG LYY+
Sbjct: 287 IAYDWTQKKIYWTDSSNHS----IYAMNLDGSHLVMIARVERPRAIVIDPCNGTLYYTD- 341
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
W +G N +I R M GS + II + P+GL +D +++Y+ D+ + I
Sbjct: 342 -------WGKFGTNGKIIRTTMAGSLKRVIIDKNLAQPSGLAIDYEDKKLYWTDAVREKI 394
Query: 393 DFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+ + DG R +V++ + F+ + GD
Sbjct: 395 ERADLDGQNR-EVLVSATIYPFSITVYGD 422
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
R L+W D+G+ PRI + +DGS +I++ I P LT+D+ T VY+ DSKLD I
Sbjct: 22 RILYWIDYGQYPRIGKANLDGSGWMPVITSGISNPTDLTIDMNTHDVYWIDSKLDTIQKI 81
Query: 396 NYDGTGRQQVILIDL 410
+Y+G G +Q+I +L
Sbjct: 82 SYNG-GNRQIIRRNL 95
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 20/108 (18%)
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
PR + ++P R L+W D+G+ PRI + +DGS +I++ I P LT+D+ T VY
Sbjct: 12 PRELAVNPL--KRILYWIDYGQYPRIGKANLDGSGWMPVITSGISNPTDLTIDMNTHDVY 69
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRK--------------LYWIDE 287
+ DSKLD I +I N I R+ +YW+D
Sbjct: 70 WIDSKLDTIQ----KISYNGGNRQIIRRNLPNPMGIAVHKSEVYWVDR 113
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 16/110 (14%)
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLF 339
R LYWID G +IGKAN+DGS +++ + L ++ T ++
Sbjct: 22 RILYWIDYGQYP---RIGKANLDGSGWMPVITSGISNPTDLTIDMN---------THDVY 69
Query: 340 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
W D + I++I +G NR I + PN + + + VY+ D L
Sbjct: 70 WID-SKLDTIQKISYNGGNRQII---RRNLPNPMGIAVHKSEVYWVDRNL 115
>gi|301771878|ref|XP_002921359.1| PREDICTED: low-density lipoprotein receptor-related protein 5-like
[Ailuropoda melanoleuca]
Length = 1620
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 126/245 (51%), Gaps = 48/245 (19%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + L
Sbjct: 121 VQNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIAL 180
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 181 DPAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKL 238
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
FI +AN+DGS +V G L A
Sbjct: 239 SFIH----------------------------------RANLDGSFRQKVVEGSLTHPFA 264
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L L LY WTDW G R I+S +Y P + + +
Sbjct: 265 LTLSGDTLY-----------WTDWQTRSIHACNKRTGEKRKEILSA-LYSPMDIQVLSSE 312
Query: 380 RRVYF 384
R+ YF
Sbjct: 313 RQPYF 317
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 145/346 (41%), Gaps = 89/346 (25%)
Query: 59 EILSNDSVTCQDMNECEQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAA 116
++LS++ E G CS +C + + Y C+C G L+ + TCKA
Sbjct: 307 QVLSSERQPYFHTRCAEDNGGCSHLCLLSPREPFYTCACPTGVQLQDNGKTCKAGAEEVL 366
Query: 117 FL----------------------IISNRHSILV-----------ADLEEKGKDHR---- 139
L + RH+I + D E +
Sbjct: 367 LLARRTDLRRISLDTPDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDG 426
Query: 140 --AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
AQ +V + ++ +G+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR +
Sbjct: 427 SGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAI 486
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+L P G ++WTDWGENP+IE +DG R +++T + WPNGL LD+ ++Y+ D+
Sbjct: 487 VLHPVMGL--MYWTDWGENPKIECAHLDGQERHILVNTSLGWPNGLALDLQEGKLYWGDA 544
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
K D KI N+DG+ L+ +L
Sbjct: 545 KTD----------------------------------KIEVINVDGTKRRTLLEDKLPHI 570
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ ++R II
Sbjct: 571 FGFTLLGDFIY-----------WTDW-QRRSIERVHKVKASRDVII 604
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 140 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 188
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 189 ----WTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 244
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 245 NLDGSFRQKVVEGSLTHPFALTLSGD 270
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 117/247 (47%), Gaps = 30/247 (12%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
C K G CS+ C TP C CP G E+LS DM C P +
Sbjct: 627 CADKNGGCSHLCFFTPRATKCGCPIGLELLS-------DMKTCIVPEAFLVFTSRAAIHR 679
Query: 92 ICSCNEGYVLEYDNHTCK----AINHSAAF-LIISNRHSILVADLEEKGKDH------RA 140
I LE +N+ + ++A +SN H I D+ K
Sbjct: 680 IS-------LETNNNDVAIPLTGVKEASALDFDVSNNH-IYWTDVSLKTISRAFMNGSSV 731
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ ++ GLD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR + LD
Sbjct: 732 EHVIEFGLDYPEGMAVDWVGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALD 791
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WT+WG PRI R MDG+N T++ K+ N LT+D +R+Y+ D +
Sbjct: 792 PTKG--YIYWTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYVDQRLYWTDLDTN 848
Query: 261 FIDCKSL 267
I+ +
Sbjct: 849 MIESSDM 855
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 140/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C AF
Sbjct: 913 DILVFHSSRQDGLNDCMHNNGQCGQLCLAIPGGHRCGCASHYTLDPTSRNCSP---PTAF 969
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+++ GL V+ + YD + IYW+D R N I
Sbjct: 970 LLFSQKCAISRMIPD------DQHSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQN-I 1022
Query: 174 EVCDENGTNRIVLAKDNITQ-----PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT VL + +Q P + +D +R LFWT N I ++G
Sbjct: 1023 KRAKDDGTQPFVLTSPSQSQNPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLNGDA 1079
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1080 MGVVLRGDRDKPRAIVVNAERGYLYFTNMQ---------------------------DRA 1112
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A +DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1113 A-----KIERAALDGTEREVLFTTGLIRPVALVVDNRLGK---------LFWVD-ADLKR 1157
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT + + +Y+ D + I+
Sbjct: 1158 IESCDLSGANRLTLEDANIVQPVGLT--VLGKHLYWIDRQQQMIE 1200
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E I+
Sbjct: 677 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIE 736
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 737 FGLDYPEGMAVDWVGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 792
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D +R+
Sbjct: 793 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYVDQRL 840
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ + D G+++V++ D
Sbjct: 841 YWTDLDTNMIE--SSDMLGQERVVIAD 865
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 148/357 (41%), Gaps = 62/357 (17%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 198 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 257
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + + +
Sbjct: 258 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGEKRKEILSA-LYSPMDIQVLSSE 312
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI-GKANMDGSNAS 307
R+ YF D C L + + R+ ++ GV L+ GK G+
Sbjct: 313 RQPYFHTRCAEDNGGCSHLCLLSP-------REPFYTCACPTGVQLQDNGKTCKAGAEEV 365
Query: 308 ILVSGQL-YEALALDLENGMLYYSTLKCTR------------WLFWTDWGENPRIERIGM 354
+L++ + ++LD + + R +++WTD E I R +
Sbjct: 366 LLLARRTDLRRISLDTPDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTD-DEVRAIRRAYL 424
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL---- 410
DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 425 DGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPR 484
Query: 411 --MVEFTNDLM-----GDN---------------------GVP-ALALDLENGMLYY 438
++ LM G+N G P LALDL+ G LY+
Sbjct: 485 AIVLHPVMGLMYWTDWGENPKIECAHLDGQERHILVNTSLGWPNGLALDLQEGKLYW 541
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N +L +N A +E D ++++ +GL L
Sbjct: 1081 GVVLRGDRDKPRAIVVNAERGYLYFTNMQD-RAAKIERAALDGTEREVLFTTGLIRPVAL 1139
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + + L+W D
Sbjct: 1140 VVDNRLGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPVGLTV----LGKHLYWID-R 1194
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T + ++ G+
Sbjct: 1195 QQQMIERVEKTTGDKRTRVQGRVAHLTGI 1223
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 26/140 (18%)
Query: 306 ASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTI 362
++++VSG L +A A+D + G +Y WTD E + + G +
Sbjct: 77 STVVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGVAVQNV 124
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 125 VISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------D 173
Query: 423 GVPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 174 QPRAIALDPAHGYMYWTDWG 193
>gi|73946682|ref|XP_533538.2| PREDICTED: very low-density lipoprotein receptor isoform 1 [Canis
lupus familiaris]
Length = 873
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 169/362 (46%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C+++ KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDIGKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D C D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DKKICGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQ------------------DIVVSGL 148
NR I LE K D AQ D V +
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 506
Query: 149 DLVE------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+++ +A DW+ IYW D I V +GT R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDVASKTISVATLDGTRRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 32/204 (15%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
I +IG++ ++ ++ L DIA +++++AD I S++ K + I
Sbjct: 451 IRKIGLERKEYIQLVE-QLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHVKMI 509
Query: 279 --------------FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDL 322
++ +YW D + + A +DG+ L + L E ++A+D
Sbjct: 510 DNVYNPAAIAVDWVYKTIYWTDVASKTISV----ATLDGTRRKFLFNSDLREPASIAVDP 565
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+G +Y W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+
Sbjct: 566 LSGFVY-----------WSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRL 614
Query: 383 YFADSKLDFIDFCNYDGTGRQQVI 406
Y+ DSKL + + +G R+ V+
Sbjct: 615 YWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|345783688|ref|XP_003432463.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 5 [Canis lupus familiaris]
Length = 1710
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/244 (38%), Positives = 125/244 (51%), Gaps = 48/244 (19%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + LD
Sbjct: 195 QNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALD 254
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 255 PAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLS 312
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
FI +AN+DGS +V G L AL
Sbjct: 313 FIH----------------------------------RANLDGSFRQKVVEGSLTHPFAL 338
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L LY WTDW G R I+S +Y P + + R
Sbjct: 339 TLSGDTLY-----------WTDWQTRSIHACNKRTGEKRKEILSA-LYSPMDIQVLSPER 386
Query: 381 RVYF 384
+ YF
Sbjct: 387 QPYF 390
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 139/330 (42%), Gaps = 89/330 (26%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL-------------- 118
E G CS +C + + Y C+C G L+ + TCKA L
Sbjct: 396 EDNGGCSHLCLLSPREPFYTCACPTGVQLQDNGKTCKAGAEEVLLLARRTDLRRISLDTP 455
Query: 119 --------IISNRHSILV-----------ADLEEKGKDHR------AQDIVVSGLDLVEG 153
+ RH+I + D E + AQ +V + ++ +G
Sbjct: 456 DFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLVNTEINDPDG 515
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
+A DW+ ++YW D+ +RIEV NGT+R +L D++ +PR ++L P G ++WTDW
Sbjct: 516 IAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSDDLDEPRAIVLHPVMGL--MYWTDW 573
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
GENP+IE +DG R +++T + WPNGL LD+ ++Y+ D+K D
Sbjct: 574 GENPKIECANLDGQERHILVNTSLGWPNGLALDLQEGKLYWGDAKTD------------- 620
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
KI N+DG+ L+ +L L +Y
Sbjct: 621 ---------------------KIEVINVDGTKRRTLLEDKLPHIFGFTLLGDFIY----- 654
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ ++R II
Sbjct: 655 ------WTDW-QRRSIERVHKVKASRDVII 677
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 213 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 261
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 262 ----WTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 317
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 318 NLDGSFRQKVVEGSLTHPFALTLSGD 343
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 118/247 (47%), Gaps = 30/247 (12%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
C K G CS+ C TP C CP G E+LS DM C P +
Sbjct: 700 CADKNGGCSHLCFFTPHATKCGCPIGLELLS-------DMKTCIVPEAFLVFTSRAAIHR 752
Query: 92 ICSCNEGYVLEYDNHTCK----AINHSAAF-LIISNRHSILVADLEEKGKDH------RA 140
I LE +N+ + ++A +SN H I D+ K
Sbjct: 753 IS-------LETNNNDVAIPLTGVKEASALDFDVSNNH-IYWTDVSLKTISRAFMNGSSV 804
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ ++ GLD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR + LD
Sbjct: 805 EHVIEFGLDYPEGMAVDWVGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALD 864
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WT+WG PRI R MDG+N T++ K+ N LT+D A +R+Y+ D +
Sbjct: 865 PTQG--YIYWTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTN 921
Query: 261 FIDCKSL 267
I+ +
Sbjct: 922 MIESSDM 928
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E I+
Sbjct: 750 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIE 809
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 810 FGLDYPEGMAVDWVGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 865
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 866 TQGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 913
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ + D G+++V++ D
Sbjct: 914 YWTDLDTNMIE--SSDMLGQERVVIAD 938
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 140/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C +F
Sbjct: 986 DILVFHSSRQDGLNDCMHNNGQCGQLCLAIPGGHRCGCASHYTLDPSSRNCSP---PTSF 1042
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+++ GL V+ + YD + IYW+D R N I
Sbjct: 1043 LLFSQKCAISRMIPD------DQHSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQN-I 1095
Query: 174 EVCDENGTNRIVLAKDNITQ-----PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT VL + +Q P + +D +R LFWT N I ++G
Sbjct: 1096 KRAKDDGTQPFVLTSPSQSQNPDRQPHDLSIDIY--SRTLFWTCEAAN-TINVHRLNGDA 1152
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1153 MGVVLRGDRDKPRAIVVNAERGYLYFTNMQ---------------------------DRA 1185
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A +DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1186 A-----KIERAALDGTEREVLFTTGLIRPVALVVDNRLGK---------LFWVD-ADLKR 1230
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT I + +Y+ D + I+
Sbjct: 1231 IESCDLSGANRLTLEDANIVQPLGLT--ILGKHLYWIDRQQQMIE 1273
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 147/357 (41%), Gaps = 62/357 (17%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 271 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 330
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 331 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGEKRKEILSA-LYSPMDIQVLSPE 385
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI-GKANMDGSNAS 307
R+ YF D C L + + R+ ++ GV L+ GK G+
Sbjct: 386 RQPYFHTRCAEDNGGCSHLCLLSP-------REPFYTCACPTGVQLQDNGKTCKAGAEEV 438
Query: 308 ILVSGQL-YEALALDLENGMLYYSTLKCTR------------WLFWTDWGENPRIERIGM 354
+L++ + ++LD + + R +++WTD E I R +
Sbjct: 439 LLLARRTDLRRISLDTPDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTD-DEVRAIRRAYL 497
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL---- 410
DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 498 DGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSDDLDEPR 557
Query: 411 --MVEFTNDLM-----GDN---------------------GVP-ALALDLENGMLYY 438
++ LM G+N G P LALDL+ G LY+
Sbjct: 558 AIVLHPVMGLMYWTDWGENPKIECANLDGQERHILVNTSLGWPNGLALDLQEGKLYW 614
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N +L +N A +E D ++++ +GL L
Sbjct: 1154 GVVLRGDRDKPRAIVVNAERGYLYFTNMQD-RAAKIERAALDGTEREVLFTTGLIRPVAL 1212
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + + L+W D
Sbjct: 1213 VVDNRLGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPLGLTI----LGKHLYWID-R 1267
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T + ++ G+
Sbjct: 1268 QQQMIERVEKTTGDKRTRVQGRVAHLTGI 1296
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 26/140 (18%)
Query: 306 ASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTI 362
++I+VSG L +A A+D + G +Y WTD E + + G +
Sbjct: 150 STIVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGVAVQNV 197
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 198 VISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------D 246
Query: 423 GVPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 247 QPRAIALDPAHGYMYWTDWG 266
>gi|345785304|ref|XP_003432666.1| PREDICTED: very low-density lipoprotein receptor [Canis lupus
familiaris]
Length = 845
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 169/362 (46%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C+++ KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDIGKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D C D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DKKICGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQ------------------DIVVSGL 148
NR I LE K D AQ D V +
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 506
Query: 149 DLVE------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+++ +A DW+ IYW D I V +GT R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDVASKTISVATLDGTRRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 32/204 (15%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
I +IG++ ++ ++ L DIA +++++AD I S++ K + I
Sbjct: 451 IRKIGLERKEYIQLVE-QLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHVKMI 509
Query: 279 --------------FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDL 322
++ +YW D + + A +DG+ L + L E ++A+D
Sbjct: 510 DNVYNPAAIAVDWVYKTIYWTDVASKTISV----ATLDGTRRKFLFNSDLREPASIAVDP 565
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+G +Y W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+
Sbjct: 566 LSGFVY-----------WSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRL 614
Query: 383 YFADSKLDFIDFCNYDGTGRQQVI 406
Y+ DSKL + + +G R+ V+
Sbjct: 615 YWLDSKLHMLSSVDLNGQDRRIVL 638
>gi|385251928|pdb|3V64|C Chain C, Crystal Structure Of Agrin And Lrp4
gi|385251931|pdb|3V64|D Chain D, Crystal Structure Of Agrin And Lrp4
Length = 349
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 159/347 (45%), Gaps = 91/347 (26%)
Query: 71 MNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR------- 123
+NEC + GYCSQ CTN++G++ C C GY L D +CKA+ L+ +NR
Sbjct: 1 VNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALG-PEPVLLFANRIDIRQVL 59
Query: 124 -----HSILVADLEEKGK---DHR-----------------------AQDIVVSGLDLVE 152
+++L+ +LE HR +++V +GL+
Sbjct: 60 PHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPG 119
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA DW+ +YW DS +RIEV + +G +R VL ++ +PR + L P GT ++WTD
Sbjct: 120 GLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGT--IYWTD 177
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN 272
WG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K I+
Sbjct: 178 WGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIE--------- 228
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+AN+DGS+ ++S L A+ + LY
Sbjct: 229 -------------------------RANLDGSHRKAVISQGLPHPFAITVFEDSLY---- 259
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
WTDW G N+ II K+++P +DI T
Sbjct: 260 -------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 294
>gi|91094565|ref|XP_967627.1| PREDICTED: similar to low-density lipoprotein receptor (ldl), partial
[Tribolium castaneum]
Length = 1731
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 122/405 (30%), Positives = 182/405 (44%), Gaps = 92/405 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++ VC+ +DC + +DE C++ EC K + C + C T G C C G L
Sbjct: 909 CIDGHLVCNKVSDCADDSDEPLHCNVDECAKVEIHQCGHKCVDTLTGYYCECNAGYKLLQ 968
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYV-LEYDNHTCKAINHSAAFLIIS 121
D C D++EC E PG CSQ C+NT GS+ C CNE Y E D HTCK + ++I +
Sbjct: 969 DGKACADIDECVETPGVCSQYCSNTPGSFYCKCNEQYYEREPDEHTCKRKDTVEPWIIFT 1028
Query: 122 NRHSILVADLEEKGKDHRAQDIV-VSGLDL------------------------------ 150
N++ I ++ + + QD++ V LD
Sbjct: 1029 NKYYIRNMSIDARVYNLVHQDLMNVVALDYDMMDQKMYFCDVTAKTIYRSPIGSPEKEPI 1088
Query: 151 -------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+EG++ DWIG IYWLD ++V + +GTNR L K +I PR +++ P
Sbjct: 1089 IRHDSHGLEGISIDWIGRKIYWLDRHSKNLDVSELDGTNRKTL-KTSINDPRAVVV--HP 1145
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L++T W I ++GMDGSN +TI++ I WPN LT+D T R+Y+AD+ LD+
Sbjct: 1146 GIGYLYFTSWHLQAYIGKLGMDGSNFTTILTWEDDIAWPNALTIDFFTDRLYWADAHLDY 1205
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG-QLYEALAL 320
I +++DG N I++SG + AL
Sbjct: 1206 ----------------------------------IAMSDLDGKNRHIVISGSSVPHVFAL 1231
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
L + +Y WTDW DG N + +T
Sbjct: 1232 SLFDDYIY-----------WTDWNLKAISRANKFDGKNLQILRNT 1265
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 43/201 (21%)
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
K+ ++I+ G++ EG+AYDW IYW DS + I + +G++ +++A+ + +PR
Sbjct: 264 KNTDIKNIISRGIN-PEGIAYDWTQKKIYWTDSSNHSIYAMNLDGSHLVMIAR--VERPR 320
Query: 196 GMMLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
+++DP GT L++TDWG+ N +I R M GS + II + P+GL +D
Sbjct: 321 AIVIDPCNGT--LYYTDWGKFGTNGKIIRTTMAGSLKRVIIDKNLAQPSGLAIDYED--- 375
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+KLYW D V KI +A++DG N +LVS
Sbjct: 376 ---------------------------KKLYWTD----AVREKIERADLDGQNREVLVSA 404
Query: 313 QLYEALALDLENGMLYYSTLK 333
+Y ++ + +Y++ L+
Sbjct: 405 TIY-PFSITVYGDYIYWTDLQ 424
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 16/131 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRW 337
I RK+YW+D + + + +DG+N L + + + A+ + G+ Y
Sbjct: 1104 IGRKIYWLDRHSKNLDV----SELDGTNRKTLKTS-INDPRAVVVHPGIGY--------- 1149
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
L++T W I ++GMDGSN +TI++ I WPN LT+D T R+Y+AD+ LD+I
Sbjct: 1150 LYFTSWHLQAYIGKLGMDGSNFTTILTWEDDIAWPNALTIDFFTDRLYWADAHLDYIAMS 1209
Query: 396 NYDGTGRQQVI 406
+ DG R VI
Sbjct: 1210 DLDGKNRHIVI 1220
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 13/149 (8%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+ Y +K+YW D + I N+DGS+ ++ + A+ +D NG LYY+
Sbjct: 281 IAYDWTQKKIYWTDSSNHS----IYAMNLDGSHLVMIARVERPRAIVIDPCNGTLYYTD- 335
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
W +G N +I R M GS + II + P+GL +D +++Y+ D+ + I
Sbjct: 336 -------WGKFGTNGKIIRTTMAGSLKRVIIDKNLAQPSGLAIDYEDKKLYWTDAVREKI 388
Query: 393 DFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+ + DG R +V++ + F+ + GD
Sbjct: 389 ERADLDGQNR-EVLVSATIYPFSITVYGD 416
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
R L+W D+G+ PRI + +DGS +I++ I P LT+D+ T VY+ DSKLD I
Sbjct: 16 RILYWIDYGQYPRIGKANLDGSGWMPVITSGISNPTDLTIDMNTHDVYWIDSKLDTIQKI 75
Query: 396 NYDGTGRQQVILIDL 410
+Y+G G +Q+I +L
Sbjct: 76 SYNG-GNRQIIRRNL 89
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 20/108 (18%)
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
PR + ++P R L+W D+G+ PRI + +DGS +I++ I P LT+D+ T VY
Sbjct: 6 PRELAVNPL--KRILYWIDYGQYPRIGKANLDGSGWMPVITSGISNPTDLTIDMNTHDVY 63
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRK--------------LYWIDE 287
+ DSKLD I +I N I R+ +YW+D
Sbjct: 64 WIDSKLDTIQ----KISYNGGNRQIIRRNLPNPMGIAVHKSEVYWVDR 107
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 16/110 (14%)
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLF 339
R LYWID G +IGKAN+DGS +++ + L ++ T ++
Sbjct: 16 RILYWIDYGQYP---RIGKANLDGSGWMPVITSGISNPTDLTIDMN---------THDVY 63
Query: 340 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
W D + I++I +G NR I + PN + + + VY+ D L
Sbjct: 64 WID-SKLDTIQKISYNGGNRQII---RRNLPNPMGIAVHKSEVYWVDRNL 109
>gi|242004500|ref|XP_002423121.1| vitellogenin receptor, putative [Pediculus humanus corporis]
gi|212506067|gb|EEB10383.1| vitellogenin receptor, putative [Pediculus humanus corporis]
Length = 1813
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 153/545 (28%), Positives = 232/545 (42%), Gaps = 102/545 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPG 58
C++ VCDG C + +DE + + CK G CS+ CH P CTCP G
Sbjct: 215 CLDGDHVCDGFPHCFDNSDEIDCAKDQKLNSSYCKSVLG-CSHDCHLAPNKNIFCTCPKG 273
Query: 59 EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL 118
L C D+NECE+ GYC Q C N G + C C++GY L DN TCKA A L
Sbjct: 274 YKLDGSLKKCIDINECEEFGYCYQKCRNFIGGHQCYCDDGYSLMSDNRTCKA--KGEALL 331
Query: 119 IISNRHSILVADLEEK-------------GKDH-----------RAQDIVV--------- 145
+ S+ ++I L+ K G H +A+ +V
Sbjct: 332 LFSSLNTIRGVYLKSKLYFSVPTEQSRVIGISHNGHQVYWTEINKAEAAIVKSNEDGSNR 391
Query: 146 -----SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
SG L E LA D++ G+IY+ D I VC EN T ++ KD I +PR + L
Sbjct: 392 VVIADSGFGLPEDLAVDYVTGNIYFTDGEKKHIGVCTENATCTVLHNKD-IDKPRAIALY 450
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK-- 258
P G +FWTDWG+ +I GMDGSN T++ I WPNG+ LDI+ R+Y+ D+K
Sbjct: 451 PQKG--MMFWTDWGKLSKIACSGMDGSNPKTLVDKNIEWPNGIALDISNDRLYWVDAKAT 508
Query: 259 ------LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN-MDGSNASILVS 311
LD D + ++ + + LYW D ++I K N G N S L+
Sbjct: 509 NIESIRLDGSDRQVNAVQHPFSIAVFEDMLYWSDWEN----MQIEKCNKFTGKNHSSLIK 564
Query: 312 GQLY--EALALDLENGMLYYSTLK-----------CTRWLFW----TDWGENPRIERIGM 354
+ E + +Y+S L C+ T P+ +G
Sbjct: 565 EKHSKGEKTKHSIYGVHIYHSVLHPRINNPCLGHGCSHMCLLAPNNTYKCACPQDFNLGP 624
Query: 355 D-GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL--------DFIDFCNYDG------ 399
D S R ++ ++ T R+ SK+ D I+ +D
Sbjct: 625 DLHSCRRVTKPLQVVVAGKTHINFITPRLLGKQSKIKLNLADHVDTIECMAFDSLSGNLI 684
Query: 400 ---TGRQQVILIDLMVEFTNDLMGD--NGVPALALDLENGMLYYSTEGAEFLKTPLFCIT 454
TG++++ L ++ ++ + L+G V +++ D LY+ E E L+ + ++
Sbjct: 685 ISDTGKKKIFLYNMRTKYVSVLLGSGIGKVTSMSFDSLGNNLYFCDE--EKLRVEVLSMS 742
Query: 455 RNYFL 459
Y L
Sbjct: 743 TKYSL 747
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 140/297 (47%), Gaps = 50/297 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ + VCDG +C +G+DEG C L+ CK C C PTP+ A C C G LS
Sbjct: 1253 ECLPMHLVCDGHKNCEDGSDEGGNCGLS-CKS--NPCEQICTPTPVSARCACKQGYFLSA 1309
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI---- 119
+ +C D++EC + CSQ+C NT G + CSC E ++L+ D TCKA +F++
Sbjct: 1310 NGHSCIDIDECAEEK-CSQICHNTPGGFNCSCAEDFILKSDRVTCKAKGGRMSFILSGDD 1368
Query: 120 ----ISNRHSIL----------VADLEEKGKDHR------------------AQDIVVSG 147
+SN + + + L+ + +R +Q+ +
Sbjct: 1369 EIRKVSNNFNQMDLLVFEPGAQIVGLDVDTRKNRIIWASGSSGKISALDVTTSQETSLQS 1428
Query: 148 LDLVEGLAYDWIGGHIYWLD-SRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+D + YDW+ G+I+++D S+ N+I+VC+ E VL T ++++P G
Sbjct: 1429 MDRPSKVTYDWLTGNIFYIDNSKPNKIKVCNLEKKKQSTVLTASPDTLITNLVIEPVSG- 1487
Query: 206 RWLFWTDWGEN------PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
LF++ + I + N + ++ST + W +GL +D +Y++D
Sbjct: 1488 -LLFYSHVRSSVLQRPVSEILSYSFEEQNSTLLVSTDLTWVSGLVVDRIRGYLYWSD 1543
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 93/424 (21%), Positives = 163/424 (38%), Gaps = 87/424 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALC---TCPPGEI 60
+C+ +CD DC + +DE P LCS LC TC GE
Sbjct: 1206 KCIFNKWLCDKDNDCGDNSDEDPE-----------LCSRRAGSVGFLQLCQDFTCKSGEC 1254
Query: 61 LSNDSVTCQDMNECE-------------QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT 107
L V C CE + C Q+CT T S C+C +GY L + H+
Sbjct: 1255 LPMHLV-CDGHKNCEDGSDEGGNCGLSCKSNPCEQICTPTPVSARCACKQGYFLSANGHS 1313
Query: 108 CKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD 167
C I+ A + S + + A+D ++ D V A GG + ++
Sbjct: 1314 CIDIDECA-----EEKCSQICHNTPGGFNCSCAEDFILKS-DRVTCKAK---GGRMSFIL 1364
Query: 168 SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227
S G + I +N Q ++ +P + +G+D
Sbjct: 1365 S-----------GDDEIRKVSNNFNQMDLLVFEPGA----------------QIVGLDVD 1397
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDE 287
R +I W +G + I+ V + +S++ + V Y + +++ID
Sbjct: 1398 TRKN----RIIWASGSSGKISALDVTTSQE----TSLQSMDRPSKVTYDWLTGNIFYID- 1448
Query: 288 GGNGVPLKIGKANMDGSNASILVSGQ---LYEALALDLENGMLYYSTLKCTRWLFWTDWG 344
N P KI N++ S +++ L L ++ +G+L+YS ++ +
Sbjct: 1449 --NSKPNKIKVCNLEKKKQSTVLTASPDTLITNLVIEPVSGLLFYSHVRSSVL------- 1499
Query: 345 ENPRIERIG--MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
+ P E + + N + ++ST + W +GL +D +Y++D I+ +DG+ R
Sbjct: 1500 QRPVSEILSYSFEEQNSTLLVSTDLTWVSGLVVDRIRGYLYWSDLYYQVIEKTRFDGSQR 1559
Query: 403 QQVI 406
Q V
Sbjct: 1560 QIVF 1563
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 104/455 (22%), Positives = 165/455 (36%), Gaps = 109/455 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLA-ECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ T VCDG+ DC +G+DE GC +C F ++ C GE N
Sbjct: 128 CIQNTWVCDGQPDCLDGSDETVGCGTKLDCHGGFKCKNHHCIIQEFHC-----DGE---N 179
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTC--------------- 108
D D C + + C G ++C+ +G V +H C
Sbjct: 180 DCGDNSDEENCTMKFHSTDHCNKELGLFLCT--DGIVCLDGDHVCDGFPHCFDNSDEIDC 237
Query: 109 ---KAINHSAAFLIISNRHSILVADLEEK----GKDHRAQDIVVSGLDLVE----GLAY- 156
+ +N S ++ H +A + K ++ + +D+ E G Y
Sbjct: 238 AKDQKLNSSYCKSVLGCSHDCHLAPNKNIFCTCPKGYKLDGSLKKCIDINECEEFGYCYQ 297
Query: 157 ---DWIGGHIYWLD---SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD-------PSP 203
++IGGH + D S ++ C G ++ + N RG+ L P+
Sbjct: 298 KCRNFIGGHQCYCDDGYSLMSDNRTCKAKGEALLLFSSLNTI--RGVYLKSKLYFSVPTE 355
Query: 204 GTR---------WLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
+R ++WT+ + I + DGSNR I + P L +D T +Y
Sbjct: 356 QSRVIGISHNGHQVYWTEINKAEAAIVKSNEDGSNRVVIADSGFGLPEDLAVDYVTGNIY 415
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRK------------LYWIDEGGNGVPLKIGKANM 301
F D + I + V ++ K ++W D G KI + M
Sbjct: 416 FTDGEKKHIGVCTENATCTVLHNKDIDKPRAIALYPQKGMMFWTDWGKLS---KIACSGM 472
Query: 302 DGSNASILVSGQLY--EALALDLENGMLYYSTLKCTR----------------------- 336
DGSN LV + +ALD+ N LY+ K T
Sbjct: 473 DGSNPKTLVDKNIEWPNGIALDISNDRLYWVDAKATNIESIRLDGSDRQVNAVQHPFSIA 532
Query: 337 ----WLFWTDWGENPRIERIG-MDGSNRSTIISTK 366
L+W+DW EN +IE+ G N S++I K
Sbjct: 533 VFEDMLYWSDW-ENMQIEKCNKFTGKNHSSLIKEK 566
>gi|351709794|gb|EHB12713.1| Low-density lipoprotein receptor-related protein 5 [Heterocephalus
glaber]
Length = 1646
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 126/244 (51%), Gaps = 48/244 (19%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q+++VSGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + LD
Sbjct: 119 QNVIVSGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALD 178
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWGE PRIER GMDGS R I+ ++IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 179 PAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSEIYWPNGLTIDLEEQKLYWADAKLS 236
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
FI +AN+DGS +V G L AL
Sbjct: 237 FIH----------------------------------RANLDGSFRQKVVEGSLTHPFAL 262
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L LY WTDW G R I+S +Y P + + R
Sbjct: 263 TLSGDTLY-----------WTDWQTRSIHACNKRTGEKRKEILSA-LYSPMDIQVLSQER 310
Query: 381 RVYF 384
+ +F
Sbjct: 311 QPFF 314
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 143/337 (42%), Gaps = 98/337 (29%)
Query: 73 ECEQP-GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL----------- 118
+CE+ G CS +C + + Y C+C G L+ + TCKA L
Sbjct: 317 QCEEDNGGCSHLCLLSPREPFYTCACPTGVQLQDNGRTCKAGAEEVLLLARRTDLRRISL 376
Query: 119 -----------IISNRHSILV---------------------ADLEEKGKDHRAQDIVVS 146
+ RH+I + A L+ G AQ +V +
Sbjct: 377 DTPDFTDIVLQVEDIRHAIAIDYDPLEGHVYWTDDEVRAIRRARLDGSG----AQTLVNT 432
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTR 206
++ +G+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR ++L P G
Sbjct: 433 EINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGL- 491
Query: 207 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKS 266
++WTDWGENP+IE +DG R +++T + WPNGL LD+ ++Y+ D+K D
Sbjct: 492 -MYWTDWGENPKIECANLDGRERHVLVNTSLGWPNGLALDLQEGKLYWGDAKTD------ 544
Query: 267 LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGM 326
KI N+DG+ L+ +L L
Sbjct: 545 ----------------------------KIEVINVDGTKRRTLLEDKLPHIFGFTLLGDF 576
Query: 327 LYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+Y WTDW + IER+ ++R II
Sbjct: 577 IY-----------WTDW-QRRSIERVHKVKASRDVII 601
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 88/146 (60%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 137 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 185
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ ++IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 186 ----WTDWGETPRIERAGMDGSTRKIIVDSEIYWPNGLTIDLEEQKLYWADAKLSFIHRA 241
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 242 NLDGSFRQKVVEGSLTHPFALTLSGD 267
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 105/230 (45%), Gaps = 46/230 (20%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C T + C C G L D TC AFL+ ++R +I LE D
Sbjct: 629 GGCSHLCFFTPRATKCGCPIGLELLSDMKTCIV---PEAFLVFTSRAAIHRISLETNNND 685
Query: 138 ----------------------------------------HRAQDIVVSGLDLVEGLAYD 157
+ ++ GLD EG+A D
Sbjct: 686 VAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIEFGLDYPEGMAVD 745
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP 217
W+G ++YW D+ NRIEV +G R VL ++ PR + LDP+ G +++WT+WG P
Sbjct: 746 WMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTKG--YIYWTEWGGKP 803
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
RI R MDG+N T++ K+ N LT+D A +R+Y+ D + I+ ++
Sbjct: 804 RIVRAFMDGTNCITLVD-KVGRANDLTIDYADQRLYWTDLDTNMIESSNM 852
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E I+
Sbjct: 674 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIE 733
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 734 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 789
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 790 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCITLVD-KVGRANDLTIDYADQRL 837
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ N G+++V++ D
Sbjct: 838 YWTDLDTNMIESSNM--LGQERVVIAD 862
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 135/351 (38%), Gaps = 91/351 (25%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C + F
Sbjct: 910 DILVFHSSRQDGLNDCVHNNGQCEQLCLAIPGGHRCGCASHYTLDPSSRNCSP---PSTF 966
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+++ GL V+ + YD + IYW+D R N
Sbjct: 967 LLFSQKCAISRMIPD------DQHSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQN-- 1018
Query: 174 EVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
I AKD+ +Q +P T G++P +
Sbjct: 1019 ----------IKRAKDDGSQAGYDTGRVNPELYTFVLTSPGQSPDRQ------------- 1055
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
P+ L++DI YS R L+W E N
Sbjct: 1056 ------PHDLSIDI---------------------------YS---RTLFWTCEAAN--- 1076
Query: 294 LKIGKANMDGSNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
I +DG +++ G A+ ++ E G LY++ ++ +IER
Sbjct: 1077 -TINVHRLDGDAMGVVLRGDRDKPRAITVNAERGYLYFTNMQ----------DRAAKIER 1125
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
+DG+ R + +T + P L +D A ++++ D+ L I+ C+ G R
Sbjct: 1126 AALDGTEREVLFTTGLIRPVALVVDNALGKLFWVDADLKRIESCDLSGANR 1176
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 131/298 (43%), Gaps = 33/298 (11%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 195 IERAGMDGSTRKIIVDSEIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 254
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 255 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGEKRKEILSA-LYSPMDIQVLSQE 309
Query: 250 RRVYF-ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI-GKANMDGSNAS 307
R+ +F + D C L + + R+ ++ GV L+ G+ G+
Sbjct: 310 RQPFFHTQCEEDNGGCSHLCLLSP-------REPFYTCACPTGVQLQDNGRTCKAGAEEV 362
Query: 308 ILVSGQL-----------YEALALDLENG----MLYYSTLKCTRWLFWTDWGENPRIERI 352
+L++ + + + L +E+ + Y L+ ++WTD E I R
Sbjct: 363 LLLARRTDLRRISLDTPDFTDIVLQVEDIRHAIAIDYDPLEGH--VYWTD-DEVRAIRRA 419
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 420 RLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDL 477
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 33/219 (15%)
Query: 208 LFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC-- 264
++WTD E + + G+ +I + + P+GL D +++Y+ DS+ + I+
Sbjct: 96 VYWTDVSEEAIKQTYLNQTGAATQNVIVSGLVSPDGLACDWVGKKLYWTDSETNRIEVAN 155
Query: 265 -----------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+ L+ + +YW D G +I +A MDGS I+V +
Sbjct: 156 LNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGETP---RIERAGMDGSTRKIIVDSE 212
Query: 314 LY--EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
+Y L +DLE LY++ K + I R +DGS R ++ + P
Sbjct: 213 IYWPNGLTIDLEEQKLYWADAKLS------------FIHRANLDGSFRQKVVEGSLTHPF 260
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
LTL T +Y+ D + I CN +++ IL L
Sbjct: 261 ALTLSGDT--LYWTDWQTRSIHACNKRTGEKRKEILSAL 297
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N +L +N A +E D ++++ +GL L
Sbjct: 1089 GVVLRGDRDKPRAITVNAERGYLYFTNMQD-RAAKIERAALDGTEREVLFTTGLIRPVAL 1147
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + R L+W D
Sbjct: 1148 VVDNALGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPVGLTV----LGRHLYWID-R 1202
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T I ++ G+
Sbjct: 1203 QQQMIERVEKTTGDKRTRIQGRVAHLTGI 1231
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 30/169 (17%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYS 330
++Y + +YW D+ I +A +DGS A LV+ ++ + +A+D
Sbjct: 397 IDYDPLEGHVYWTDDEVRA----IRRARLDGSGAQTLVNTEINDPDGIAVDW-------- 444
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD-SKL 389
R L+WTD G + RIE ++G++R ++S + P + L +Y+ D +
Sbjct: 445 ---VARNLYWTDTGTD-RIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGLMYWTDWGEN 500
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYY 438
I+ N DG R++ +L++ + + N LALDL+ G LY+
Sbjct: 501 PKIECANLDG--RERHVLVNTSLGWPN---------GLALDLQEGKLYW 538
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 306 ASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTI 362
++I+VSG L +A A+D + G +Y WTD E + + G+ +
Sbjct: 74 STIVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAATQNV 121
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 122 IVSGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------D 170
Query: 423 GVPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 171 QPRAIALDPAHGYMYWTDWG 190
>gi|62088994|dbj|BAD92944.1| low density lipoprotein-related protein 1B variant [Homo sapiens]
Length = 1720
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 144/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +CD K DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 23 RCIPSGGLCDNKDDCGDGSDER-NCHINECLSKKVSGCSQDCQDLPVSYKCKCWPGFQLK 81
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C +GY ++ DN + CK+++ FLI++
Sbjct: 82 DDGKTCVDIDECSSGFPCSQQCINTYGTYKCLCTDGYEIQPDNPNGCKSLSDEEPFLILA 141
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
+ H I L ++G D+R + I
Sbjct: 142 DHHEIRKISTDGSNYTLLKQGLNNVIAIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDI 201
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG +L + PR + LDP
Sbjct: 202 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTILVSKRLKFPRDLSLDPQ 261
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +L+W D E P I R+GMDG+N+S +I TKI P LT+D RR+Y+AD
Sbjct: 262 AG--YLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNRRLYWAD 313
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 134/328 (40%), Gaps = 74/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSNT--CHPTPLGALCTCPP 57
+C+ + CD DC +G+DE GC +A C+ C + C+ C C P
Sbjct: 894 KCIPMDLQCDRLDDCGDGSDE-QGCRIAPTEYTCEDNVNPCGDDAYCNQIKTSVFCRCKP 952
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G + + C+D+NEC G CS C N +GSY C C++ + + N+TC A
Sbjct: 953 GFQRNMKNRQCEDLNECLVFGTCSHQCINVEGSYKCVCDQNF--QERNNTCIAEGSEDQV 1010
Query: 118 LIISNRHSIL--------------VADLEE------------------------------ 133
L I+N IL ++ +E
Sbjct: 1011 LYIANDTDILGFIYPFNYSGDHQQISHIEHNSRITGMDVYYQRDMIIWSTQFNPGGIFYK 1070
Query: 134 --KGKDHRAQD--IVVSGLDLVEGLAYDWIGGHIYWLD-SRLN--------------RIE 174
G++ R + ++ +A DW+ G+IYW D SR++ I
Sbjct: 1071 RIHGREKRQANSGLICPEFKRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSIN 1130
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V NG N L + +P + ++P G ++WT G++ IE MDG+ R ++
Sbjct: 1131 VGQLNGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVVGDHSHIEEAAMDGTLRRILVQ 1188
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D + R+Y+AD +L I
Sbjct: 1189 KNLQRPTGLAVDYFSERIYWADFELSII 1216
>gi|417413895|gb|JAA53257.1| Putative low-density lipoprotein receptor-related protein 5
precursor, partial [Desmodus rotundus]
Length = 1585
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 124/245 (50%), Gaps = 48/245 (19%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + L
Sbjct: 69 VQNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIAL 128
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 129 DPAHG--YMYWTDWGETPRIERAGMDGSTRKVIVDSDIYWPNGLTIDLEEQKLYWADAKL 186
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
FI +AN+DGS +V G L A
Sbjct: 187 SFIH----------------------------------RANLDGSFRQKVVEGSLTHPFA 212
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L L LY WTDW G R I+ +Y P + +
Sbjct: 213 LTLSGDTLY-----------WTDWQTRSIHACNKRTGEKRKEILRA-LYSPMDIQVLSPE 260
Query: 380 RRVYF 384
R+ YF
Sbjct: 261 RQPYF 265
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 149/339 (43%), Gaps = 61/339 (17%)
Query: 32 ECKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKG 89
+C+ G CS+ C +P C CP G L +D C+ E+ ++ +
Sbjct: 268 QCEEDNGGCSHLCLLSPREPFYTCACPTGVQLQDDGKACK--AGAEEVLLLARRTDLRRI 325
Query: 90 SYICSCNEGYVLEYDN-HTCKAINHSA----AFLIISNRHSILVADLEEKGKDHRAQDIV 144
S VL+ D+ AI++ + +I A L+ G AQ +V
Sbjct: 326 SLDTPDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAHLDGSG----AQTLV 381
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ ++ +G+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR + L PG
Sbjct: 382 NTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIAL--HPG 439
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
++WTDWGENP+IE +DG R +++T + WPNGL LD+ ++Y+ D+K D
Sbjct: 440 MGLMYWTDWGENPKIECANLDGQERRVLVNTSLGWPNGLALDLQEGKLYWGDAKTD---- 495
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
KI N+DG+ L+ +L L
Sbjct: 496 ------------------------------KIEVINVDGTKRRTLLEDKLPHIFGFTLLG 525
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+Y WTDW + IER+ ++R II
Sbjct: 526 DFIY-----------WTDW-QRRSIERVHKVKASRDVII 552
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 152/352 (43%), Gaps = 96/352 (27%)
Query: 73 ECEQP-GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
+CE+ G CS +C + + Y C+C G L+ D CKA + L+++ R
Sbjct: 268 QCEEDNGGCSHLCLLSPREPFYTCACPTGVQLQDDGKACKA--GAEEVLLLARR------ 319
Query: 130 DLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+ L RI + + T+ IVL D
Sbjct: 320 --------------------------------------TDLRRISLDTPDFTD-IVLQVD 340
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
+I + DP G +++WTD E I R +DGS T+++T+I P+G+ +D
Sbjct: 341 DIRHAIAIDYDPLEG--YVYWTD-DEVRAIRRAHLDGSGAQTLVNTEINDPDGIAVDW-- 395
Query: 250 RRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL 309
+ R LYW D G + +I ++G++ IL
Sbjct: 396 ----------------------------VARNLYWTDTGTD----RIEVTRLNGTSRKIL 423
Query: 310 VSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYW 369
VS L E A+ L GM ++WTDWGENP+IE +DG R +++T + W
Sbjct: 424 VSEDLDEPRAIALHPGM---------GLMYWTDWGENPKIECANLDGQERRVLVNTSLGW 474
Query: 370 PNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
PNGL LD+ ++Y+ D+K D I+ N DGT R+ ++ L F L+GD
Sbjct: 475 PNGLALDLQEGKLYWGDAKTDKIEVINVDGTKRRTLLEDKLPHIFGFTLLGD 526
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 88 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 136
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 137 ----WTDWGETPRIERAGMDGSTRKVIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 192
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 193 NLDGSFRQKVVEGSLTHPFALTLSGD 218
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 120/249 (48%), Gaps = 34/249 (13%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPG----YCSQMC--- 84
C + G CS+ C TP C CP G E+LS DM C P + S+
Sbjct: 575 CADRNGGCSHLCFFTPRTTKCGCPIGLELLS-------DMKTCIVPEAFLVFTSRATIHR 627
Query: 85 ------TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH 138
N + E L++D ++++ + + +I A L +H
Sbjct: 628 ISLETNNNDVAIPLTGVKEASALDFD------VSNNHIYWTDVSLKTISRAFLNGSSVEH 681
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
++ GLD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR +
Sbjct: 682 ----VIEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLA 737
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
LDP+ G +++WT+WG PRI R MDG+ T++ K+ N LT+D A +R+Y+ D
Sbjct: 738 LDPTKG--YIYWTEWGGKPRIVRAFMDGTTCMTLVD-KVGRANDLTIDYADQRLYWTDLD 794
Query: 259 LDFIDCKSL 267
+ I+ ++
Sbjct: 795 TNMIESSNM 803
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 142/345 (41%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + CSC Y L+ + C + F
Sbjct: 861 DILVFHSSRQDGLNDCVHSNGQCGQLCLAVPGGHRCSCASHYTLDPSSRNCSP---PSTF 917
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+++ GL V+ + YD + IYW+D R N I
Sbjct: 918 LLFSQKGAISRMIPD------DQHSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQN-I 970
Query: 174 EVCDENGTNRIVLA-----KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++G+ +L +++ QP + +D +R LFWT N I ++G
Sbjct: 971 KRARDDGSQPSILTSPSPNQNSDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLNGDA 1027
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1028 MGVVLRGDRDKPRAIVVNAERGYLYFTNMQ---------------------------DRA 1060
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A +DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1061 A-----KIERAALDGTEREVLFTTGLIRPVALVVDNVLGK---------LFWVD-ADLKR 1105
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT I + +Y+ D + I+
Sbjct: 1106 IESCDLSGANRLTLEDANIVQPVGLT--ILGQHLYWTDRQQQMIE 1148
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E I+
Sbjct: 625 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFLNGSSVEHVIE 684
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 685 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 740
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+ T++ K+ N LT+D A +R+
Sbjct: 741 TKGYIY-----------WTEWGGKPRIVRAFMDGTTCMTLVD-KVGRANDLTIDYADQRL 788
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ N G+++V++ D
Sbjct: 789 YWTDLDTNMIESSNM--LGQERVVIAD 813
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 147/357 (41%), Gaps = 62/357 (17%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + ++V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 146 IERAGMDGSTRKVIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 205
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+ +Y P + +
Sbjct: 206 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGEKRKEILRA-LYSPMDIQVLSPE 260
Query: 250 RRVYF-ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI-GKANMDGSNAS 307
R+ YF + D C L + + R+ ++ GV L+ GKA G+
Sbjct: 261 RQPYFRTQCEEDNGGCSHLCLLSP-------REPFYTCACPTGVQLQDDGKACKAGAEEV 313
Query: 308 ILVSGQL-YEALALDLENGMLYYSTLKCTR------------WLFWTDWGENPRIERIGM 354
+L++ + ++LD + + R +++WTD E I R +
Sbjct: 314 LLLARRTDLRRISLDTPDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTD-DEVRAIRRAHL 372
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL---- 410
DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 373 DGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPR 432
Query: 411 --MVEFTNDLM-----GDN---------------------GVP-ALALDLENGMLYY 438
+ LM G+N G P LALDL+ G LY+
Sbjct: 433 AIALHPGMGLMYWTDWGENPKIECANLDGQERRVLVNTSLGWPNGLALDLQEGKLYW 489
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 33/216 (15%)
Query: 208 LFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC-- 264
++WTD E + + G+ ++ + + P+GL D +++Y+ DS+ + I+
Sbjct: 47 VYWTDVSEEAIKQTYLNRSGAAVQNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVAN 106
Query: 265 -----------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+ L+ + +YW D G +I +A MDGS ++V
Sbjct: 107 LNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGETP---RIERAGMDGSTRKVIVDSD 163
Query: 314 LY--EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
+Y L +DLE LY++ K + I R +DGS R ++ + P
Sbjct: 164 IYWPNGLTIDLEEQKLYWADAKLS------------FIHRANLDGSFRQKVVEGSLTHPF 211
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
LTL T +Y+ D + I CN +++ IL
Sbjct: 212 ALTLSGDT--LYWTDWQTRSIHACNKRTGEKRKEIL 245
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 306 ASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTI 362
++++VSG L +A A+D + G +Y WTD E + + G+ +
Sbjct: 25 STVVVSG-LEDAAAVDFQFSKGTVY-----------WTDVSEEAIKQTYLNRSGAAVQNV 72
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 73 VISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------D 121
Query: 423 GVPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 122 QPRAIALDPAHGYMYWTDWG 141
>gi|17298317|gb|AAL38109.1| candidate tumor suppressor protein [Homo sapiens]
Length = 1537
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 143/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +CD K DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 226 RCIPSGGLCDNKDDCGDGSDER-NCHINECLSKKVSGCSQDCQDLPVSYKCKCWPGFQLK 284
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C +GY ++ DN + CK+++ FLI++
Sbjct: 285 DDGKTCVDIDECSSGFPCSQQCINTYGTYKCLCTDGYEIQPDNPNGCKSLSDEEPFLILA 344
Query: 122 NRHSI--------------------LVADLE-----------EKGKDHRAQDIVVSGLDL 150
+ H I + D + + R + ++G D+
Sbjct: 345 DHHEIRKISTDGSNYTLLKQGLNNVIAIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDI 404
Query: 151 V--------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
LA DWIG ++YW D+ IEV NG +L + PR + LDP
Sbjct: 405 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTILVSKRLKFPRDLSLDPQ 464
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +L+W D E P I R+GMDG+N+S +I TKI P LT+D RR+Y+AD
Sbjct: 465 AG--YLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNRRLYWAD 516
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 134/328 (40%), Gaps = 74/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSNT--CHPTPLGALCTCPP 57
+C+ + CD DC +G+DE GC +A C+ C + C+ C C P
Sbjct: 1097 KCIPMDLQCDRLDDCGDGSDE-QGCRIAPTEYTCEDNVNPCGDDAYCNQIKTSVFCRCKP 1155
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G + + C+D+NEC G CS C N +GSY C C++ + + N+TC A
Sbjct: 1156 GFQRNMKNRQCEDLNECLVFGTCSHQCINVEGSYKCVCDQNF--QERNNTCIAEGSEDQV 1213
Query: 118 LIISNRHSIL--------------VADLEE------------------------------ 133
L I+N IL ++ +E
Sbjct: 1214 LYIANDTDILGFIYPFNYSGDHQQISHIEHNSRITGMDVYYQRDMIIWSTQFNPGGIFYK 1273
Query: 134 --KGKDHRAQD--IVVSGLDLVEGLAYDWIGGHIYWLD-SRLN--------------RIE 174
G++ R + ++ +A DW+ G+IYW D SR++ I
Sbjct: 1274 RIHGREKRQANSGLICPEFKRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSIN 1333
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V NG N L + +P + ++P G ++WT G++ IE MDG+ R ++
Sbjct: 1334 VGQLNGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVVGDHSHIEEAAMDGTLRRILVQ 1391
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D + R+Y+AD +L I
Sbjct: 1392 KNLQRPTGLAVDYFSERIYWADFELSII 1419
>gi|440894218|gb|ELR46724.1| Low-density lipoprotein receptor-related protein 5, partial [Bos
grunniens mutus]
Length = 1614
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 125/245 (51%), Gaps = 48/245 (19%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + L
Sbjct: 95 VQNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIAL 154
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 155 DPAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKL 212
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
FI +AN+DGS +V G L A
Sbjct: 213 SFIH----------------------------------RANLDGSFRQKVVEGSLTHPFA 238
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L L LY WTDW G R I+S +Y P + +
Sbjct: 239 LTLSGDTLY-----------WTDWQTRSIHACNKRTGDKRKEILSA-LYSPMDIQVLSPE 286
Query: 380 RRVYF 384
R+ Y+
Sbjct: 287 RQPYY 291
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 139/330 (42%), Gaps = 89/330 (26%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL-------------- 118
E G CS +C + + Y C+C G L+ + TCKA L
Sbjct: 297 EDNGGCSHLCLLSPREPFYACACPTGVQLQDNGQTCKAGAEEVLLLARRTDLRRISLDTP 356
Query: 119 --------IISNRHSILV-----------ADLEEKGKDHR------AQDIVVSGLDLVEG 153
+ RH+I + D E + AQ +V + ++ +G
Sbjct: 357 DFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLVNTEINDPDG 416
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR ++L P G ++WTDW
Sbjct: 417 IAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGL--MYWTDW 474
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
GENP+IE +DG R +++T + WPNGL LD+ ++Y+ D+K D
Sbjct: 475 GENPKIECANLDGQERHILVNTSLGWPNGLALDLQEGKLYWGDAKTD------------- 521
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
KI N+DG+ L+ +L L +Y
Sbjct: 522 ---------------------KIEVINVDGTKRRTLLEDKLPHIFGFTLLGDFIY----- 555
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ ++R II
Sbjct: 556 ------WTDW-QRRSIERVHKVKASRDVII 578
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 114 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 162
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 163 ----WTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 218
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 219 NLDGSFRQKVVEGSLTHPFALTLSGD 244
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 121/249 (48%), Gaps = 34/249 (13%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPG----YCSQMC--- 84
C + G CS+ C TP C CP G E+LS DM C P + S+
Sbjct: 601 CADRNGGCSHLCFFTPRATKCGCPIGLELLS-------DMKTCIVPEAFLVFTSRAAIHR 653
Query: 85 ------TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH 138
N + E L++D ++++ + + +I A + +H
Sbjct: 654 ISLDTNNNDVAIPLTGVKEASALDFD------VSNNHIYWTDVSLKTISRAFMNGSSVEH 707
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
++ GLD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR +
Sbjct: 708 ----VIEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLA 763
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
LDP+ G +++WT+WG PRI R MDG+N T++ K+ N LT+D A +R+Y+ D
Sbjct: 764 LDPTKG--YIYWTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLD 820
Query: 259 LDFIDCKSL 267
+ I+ ++
Sbjct: 821 TNMIESSNM 829
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI +D +N I T + + L D++ +Y+ D L F++ S+E I+
Sbjct: 651 IHRISLDTNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIE 710
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 711 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 766
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 767 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 814
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ N G+++V++ D
Sbjct: 815 YWTDLDTNMIESSNM--LGQERVVIAD 839
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 137/345 (39%), Gaps = 65/345 (18%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C + CSC Y L+ + C F
Sbjct: 887 DILVFHSSRQDGLNDCMHNNGQCGQLCLAVPSGHRCSCASHYTLDPSSRNCSP---PTTF 943
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D R+ D+++ GL V+ + YD + IYW+D R N I
Sbjct: 944 LLFSQKCAISRMIPD------DQRSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQN-I 996
Query: 174 EVCDENGTNRIVLAKDNITQPRGMMLDPSP-----GTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT + +Q + + P +R LFWT N I ++G
Sbjct: 997 KRAKDDGTQASPFVLTSPSQSQNLDRQPHDLSIDIYSRTLFWTCEATN-TINVHRLNGDA 1055
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1056 MGVVLRGDRDKPRAIVVNAERGYLYFTNMQ---------------------------DRA 1088
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A +DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1089 A-----KIERAALDGTEREVLFTTGLIRPVALVVDNTLGK---------LFWVD-ADLKR 1133
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT + + +Y+ D + I+
Sbjct: 1134 IESCDLSGANRLTLEDANIVQPVGLT--VLGKHLYWIDRQQQMIE 1176
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 142/357 (39%), Gaps = 62/357 (17%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 172 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 231
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 232 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGDKRKEILSA-LYSPMDIQVLSPE 286
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
R+ Y+ + D C L + + R+ ++ GV L+ +
Sbjct: 287 RQPYYHTRCEEDNGGCSHLCLLSP-------REPFYACACPTGVQLQDNGQTCKAGAEEV 339
Query: 309 LVSGQLYEALALDLENGMLYYSTLKCTR--------------WLFWTDWGENPRIERIGM 354
L+ + + + L+ L+ +++WTD E I R +
Sbjct: 340 LLLARRTDLRRISLDTPDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTD-DEVRAIRRAYL 398
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL---- 410
DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 399 DGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPR 458
Query: 411 --MVEFTNDLM-----GDN---------------------GVP-ALALDLENGMLYY 438
++ LM G+N G P LALDL+ G LY+
Sbjct: 459 AIVLHPVMGLMYWTDWGENPKIECANLDGQERHILVNTSLGWPNGLALDLQEGKLYW 515
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N +L +N A +E D ++++ +GL L
Sbjct: 1057 GVVLRGDRDKPRAIVVNAERGYLYFTNMQD-RAAKIERAALDGTEREVLFTTGLIRPVAL 1115
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + + L+W D
Sbjct: 1116 VVDNTLGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPVGLTV----LGKHLYWID-R 1170
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ + T + ++ G+
Sbjct: 1171 QQQMIERVDKTTGDARTRVQGRVAHLTGI 1199
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 38/166 (22%)
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRW 337
R + +D GG V ++I+VSG L +A A+D + G +Y
Sbjct: 37 RDVRLVDAGGVKV------------ESTIVVSG-LEDAAAVDFQFSKGAVY--------- 74
Query: 338 LFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
WTD E + + G+ ++ + + P+GL D +++Y+ DS+ + I+ N
Sbjct: 75 --WTDVSEEAIKQTYLNQTGAAVQNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVAN 132
Query: 397 YDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+GT R+ + DL + A+ALD +G +Y++ G
Sbjct: 133 LNGTSRKVLFWQDL-----------DQPRAIALDPAHGYMYWTDWG 167
>gi|410045500|ref|XP_508605.3| PREDICTED: low-density lipoprotein receptor-related protein 5 [Pan
troglodytes]
Length = 1739
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 125/244 (51%), Gaps = 48/244 (19%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + LD
Sbjct: 186 QNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALD 245
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 246 PAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLS 303
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
FI +AN+DGS +V G L AL
Sbjct: 304 FIH----------------------------------RANLDGSFRQKVVEGSLTHPFAL 329
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L LY WTDW G R I+S +Y P + + R
Sbjct: 330 TLSGDTLY-----------WTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQER 377
Query: 381 RVYF 384
+ +F
Sbjct: 378 QPFF 381
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 138/330 (41%), Gaps = 89/330 (26%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL-------------- 118
E G CS +C + ++ Y C+C G L+ + TCKA L
Sbjct: 387 EDNGGCSHLCLLSPSEPFYTCACPTGVQLQDNGRTCKAGAEEVLLLARRTDLRRISLDTP 446
Query: 119 --------IISNRHSILV-----------ADLEEKGKDHR------AQDIVVSGLDLVEG 153
+ RH+I + D E + AQ +V + ++ +G
Sbjct: 447 DFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLVNTEINDPDG 506
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR + L P G ++WTDW
Sbjct: 507 IAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIALHPVMGL--MYWTDW 564
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
GENP+IE +DG R +++ + WPNGL LD+ ++Y+ D+K D
Sbjct: 565 GENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYWGDAKTD------------- 611
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
KI N+DG+ L+ +L L +Y
Sbjct: 612 ---------------------KIEVINVDGTKRRTLLEDKLPHIFGFTLLGDFIY----- 645
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ ++R II
Sbjct: 646 ------WTDW-QRRSIERVHKVKASRDVII 668
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 87/147 (59%), Gaps = 17/147 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 204 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 252
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 253 ----WTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 308
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGDN 422
N DG+ RQ+V+ L F L GD
Sbjct: 309 NLDGSFRQKVVEGSLTHPFALTLSGDT 335
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 119/247 (48%), Gaps = 30/247 (12%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
C + G CS+ C TP C CP G E+LS DM C P +
Sbjct: 691 CADRNGGCSHLCFFTPHATRCGCPIGLELLS-------DMKTCIVPEAFLVFTSRAAIHR 743
Query: 92 ICSCNEGYVLEYDNHTCK----AINHSAAF-LIISNRHSILVADLEEKG------KDHRA 140
I LE +N+ + ++A +SN H I D+ K
Sbjct: 744 IS-------LETNNNDVAIPLTGVKEASALDFDVSNNH-IYWTDVSLKTISRAFMNGSSV 795
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ +V GLD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR + LD
Sbjct: 796 EHVVEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALD 855
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WT+WG PRI R MDG+N T++ K+ N LT+D A +R+Y+ D +
Sbjct: 856 PTKG--YIYWTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTN 912
Query: 261 FIDCKSL 267
I+ ++
Sbjct: 913 MIESSNM 919
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E ++
Sbjct: 741 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVVE 800
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 801 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 856
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 857 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 904
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ N G+++V++ D
Sbjct: 905 YWTDLDTNMIESSNM--LGQERVVIAD 929
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 138/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C F
Sbjct: 977 DILVFHSSRQDGLNDCMHNNGQCGQLCLAIPGGHRCGCASHYTLDPSSRNCSP---PTTF 1033
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+++ GL V+ + YD + IYW+D R N I
Sbjct: 1034 LLFSQKSAISRMIPD------DQHSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQN-I 1086
Query: 174 EVCDENGTNRIVL-----AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT VL ++ QP + +D +R LFWT N I + G
Sbjct: 1087 KRAKDDGTQPFVLTSLSQGQNPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLSGEA 1143
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1144 MGVVLRGDRDKPRAIVVNAERGYLYFTNMQ---------------------------DRA 1176
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A +DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1177 A-----KIERAALDGTEREVLFTTGLIRPVALVVDNTLGK---------LFWVD-ADLKR 1221
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT + + +Y+ D + I+
Sbjct: 1222 IESCDLSGANRLTLEDANIVQPLGLT--VLGKHLYWIDRQQQMIE 1264
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 144/359 (40%), Gaps = 66/359 (18%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 262 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 321
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 322 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQE 376
Query: 250 RR-VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG----------- 297
R+ + + D C L + + + NG K G
Sbjct: 377 RQPFFHTRCEEDNGGCSHLCLLSPSEPFYTCACPTGVQLQDNGRTCKAGAEEVLLLARRT 436
Query: 298 ---KANMDGSNAS--ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+ ++D + + +L + A+A+D Y L+ +++WTD E I R
Sbjct: 437 DLRRISLDTPDFTDIVLQVDDIRHAIAID-------YDPLE--GYVYWTD-DEVRAIRRA 486
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL-- 410
+DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 487 YLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDE 546
Query: 411 ----MVEFTNDLM-----GDN---------------------GVP-ALALDLENGMLYY 438
+ LM G+N G P LALDL+ G LY+
Sbjct: 547 PRAIALHPVMGLMYWTDWGENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYW 605
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N +L +N A +E D ++++ +GL L
Sbjct: 1145 GVVLRGDRDKPRAIVVNAERGYLYFTNMQD-RAAKIERAALDGTEREVLFTTGLIRPVAL 1203
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + + L+W D
Sbjct: 1204 VVDNTLGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPLGLTV----LGKHLYWID-R 1258
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T I ++ G+
Sbjct: 1259 QQQMIERVEKTTGDKRTRIQGRVAHLTGI 1287
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 26/141 (18%)
Query: 305 NASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRST 361
++I+VSG L +A A+D + G +Y WTD E + + G+
Sbjct: 140 ESTIVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAVQN 187
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL
Sbjct: 188 VVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL----------- 236
Query: 422 NGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 237 DQPRAIALDPAHGYMYWTDWG 257
>gi|332249869|ref|XP_003274077.1| PREDICTED: low-density lipoprotein receptor-related protein 5
[Nomascus leucogenys]
Length = 1709
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 125/244 (51%), Gaps = 48/244 (19%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + LD
Sbjct: 336 QNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALD 395
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 396 PAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLS 453
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
FI +AN+DGS +V G L AL
Sbjct: 454 FIH----------------------------------RANLDGSFRQKVVEGSLTHPFAL 479
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L LY WTDW G R I+S +Y P + + R
Sbjct: 480 TLSGDTLY-----------WTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQER 527
Query: 381 RVYF 384
+ +F
Sbjct: 528 QPFF 531
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 177/452 (39%), Gaps = 134/452 (29%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN---------- 122
E G CS +C + + Y C+C G L+ + TCKA L
Sbjct: 537 EDNGGCSHLCLLSPREPFYTCACPTGVQLQDNGRTCKAGAEEVLLLARRTDLRRISLDTP 596
Query: 123 ------------RHSILV-----------ADLEEKGKDHR------AQDIVVSGLDLVEG 153
RH+I + D E + AQ +V + ++ +G
Sbjct: 597 DFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLVNTEINDPDG 656
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR + L P G ++WTDW
Sbjct: 657 IAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIALHPVMGL--MYWTDW 714
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
GENP+IE +DG R +++ + WPNGL LD+ ++Y+ D+K D
Sbjct: 715 GENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYWGDAKTD------------- 761
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
KI N+DG+ L+ +L L +Y
Sbjct: 762 ---------------------KIEVINVDGTKRRTLLEDKLPHIFGFTLLGDFIYXXXXX 800
Query: 334 --------------CTRWLFWTDWGENPRIERIG-------------------------- 353
C+ F+T PR R G
Sbjct: 801 XXXXTNPCADRNGGCSHLCFFT-----PRATRCGCPIGLELLSDKKTCIVPEAFLTISRA 855
Query: 354 -MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
M+GS+ ++ + +P G+ +D + +Y+AD+ + I+ DG RQ ++ DL
Sbjct: 856 FMNGSSVEHVVEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDL-- 913
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEGAE 444
DN +LALD G +Y++ G +
Sbjct: 914 --------DNPR-SLALDPTKGYIYWTEWGGK 936
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 87/147 (59%), Gaps = 17/147 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 354 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 402
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 403 ----WTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 458
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGDN 422
N DG+ RQ+V+ L F L GD
Sbjct: 459 NLDGSFRQKVVEGSLTHPFALTLSGDT 485
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 104/200 (52%), Gaps = 21/200 (10%)
Query: 68 CQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL 127
C D N G CS +C T + C C G L D TC AFL IS
Sbjct: 808 CADRN-----GGCSHLCFFTPRATRCGCPIGLELLSDKKTCIV---PEAFLTISR----- 854
Query: 128 VADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
A + +H +V GLD EG+A DW+G ++YW D+ NRIEV +G R VL
Sbjct: 855 -AFMNGSSVEH----VVEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLV 909
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
++ PR + LDP+ G +++WT+WG PRI R MDG+N T++ K+ N LT+D
Sbjct: 910 WRDLDNPRSLALDPTKG--YIYWTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDY 966
Query: 248 ATRRVYFADSKLDFIDCKSL 267
A +R+Y+ D + I+ ++
Sbjct: 967 ADQRLYWTDLDTNMIESSNM 986
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 135/303 (44%), Gaps = 61/303 (20%)
Query: 135 GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
G++ R +V + L GLA D G +YW D++ ++IEV + +GT R L +D +
Sbjct: 727 GQERRV--LVNASLGWPNGLALDLQEGKLYWGDAKTDKIEVINVDGTKRRTLLEDKLPHI 784
Query: 195 RGMML--------------------DPSPGTRWL-FWTDWGENPRIER----IGMD-GSN 228
G L D + G L F+T PR R IG++ S+
Sbjct: 785 FGFTLLGDFIYXXXXXXXXXTNPCADRNGGCSHLCFFT-----PRATRCGCPIGLELLSD 839
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
+ T I + + + R + S ++ + L+ + + + LYW D G
Sbjct: 840 KKTCIVPEAF--------LTISRAFMNGSSVEHVVEFGLDYPEGMAVDWMGKNLYWADTG 891
Query: 289 GNGVPLKIGKANMDGSNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
N +I A +DG +LV L +LALD G +Y WT+WG
Sbjct: 892 TN----RIEVARLDGQFRQVLVWRDLDNPRSLALDPTKGYIY-----------WTEWGGK 936
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
PRI R MDG+N T++ K+ N LT+D A +R+Y+ D + I+ N G+++V+
Sbjct: 937 PRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTNMIESSNM--LGQERVV 993
Query: 407 LID 409
+ D
Sbjct: 994 IAD 996
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 132/345 (38%), Gaps = 102/345 (29%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C F
Sbjct: 1044 DILVFHSSRQDGLNDCMHNNGQCGQLCLAIPGGHRCGCASHYTLDPSSRNCSP---PTTF 1100
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+++ GL V+ + YD + IYW+D R N I
Sbjct: 1101 LLFSQKSAISRMIPD------DQHSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQN-I 1153
Query: 174 EVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
+ ++GT VL +++Q G+NP +
Sbjct: 1154 KRAKDDGTQPFVLT--SLSQ--------------------GQNPDRQ------------- 1178
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
P+ L++DI YS R L+W E N
Sbjct: 1179 ------PHDLSIDI---------------------------YS---RTLFWTCEATN--- 1199
Query: 294 LKIGKANMDGSNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
I + G +++ G A+ ++ E G LY++ ++ +IER
Sbjct: 1200 -TINVHRLSGEAMGVVLRGDRDKPRAIVVNAERGYLYFTNMQ----------DRAAKIER 1248
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
+DG+ R + +T + P L +D ++++ D+ L I+ C+
Sbjct: 1249 AALDGTEREVLFTTGLIRPVALVVDNTLGKLFWVDADLKRIESCD 1293
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 135/328 (41%), Gaps = 40/328 (12%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 412 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 471
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 472 SLTHPFALTL----SGDTLYWTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQE 526
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
R+ +F + D C L + + R+ ++ GV L+ +
Sbjct: 527 RQPFFHTRCEEDNGGCSHLCLLSP-------REPFYTCACPTGVQLQDNGRTCKAGAEEV 579
Query: 309 LVSGQLYEALALDLENGMLYYSTLKC--------------TRWLFWTDWGENPRIERIGM 354
L+ + + + L+ L+ +++WTD E I R +
Sbjct: 580 LLLARRTDLRRISLDTPDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTD-DEVRAIRRAYL 638
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 639 DGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDL---- 694
Query: 415 TNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+AL G++Y++ G
Sbjct: 695 -------DEPRAIALHPVMGLMYWTDWG 715
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 116/298 (38%), Gaps = 34/298 (11%)
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
L D+ +YW D N IE + G R+V+A D++ P G+ + + +++WTDW
Sbjct: 962 LTIDYADQRLYWTDLDTNMIESSNMLGQERVVIA-DDLPHPFGL----TQYSDYIYWTDW 1016
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
+ IER T+I + + + + ++R+ D + C L +
Sbjct: 1017 NLH-SIERADKTSGRNRTLIQGHLDFVMDILVFHSSRQDGLNDCMHNNGQCGQLCLAIPG 1075
Query: 274 NYSTIFRKLYWIDEGGN--GVPLKIGKANMDGSNASILVSGQLYEALALDLEN----GML 327
+ Y +D P + + + ++ Q L L L +
Sbjct: 1076 GHRCGCASHYTLDPSSRNCSPPTTFLLFSQKSAISRMIPDDQHSPDLILPLHGLRNVKAI 1135
Query: 328 YYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI-----YWPNGLTLDIATRRV 382
Y L ++++W D +N I+R DG+ + S P+ L++DI +R +
Sbjct: 1136 DYDPLD--KFIYWVDGRQN--IKRAKDDGTQPFVLTSLSQGQNPDRQPHDLSIDIYSRTL 1191
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVP-ALALDLENGMLYYS 439
++ + I+ G V L GD P A+ ++ E G LY++
Sbjct: 1192 FWTCEATNTINVHRLSGEAMGVV------------LRGDRDKPRAIVVNAERGYLYFT 1237
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 26/141 (18%)
Query: 305 NASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRST 361
++++VSG L +A A+D + G +Y WTD E + + G
Sbjct: 290 ESTVVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGVAVQN 337
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL
Sbjct: 338 VVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL----------- 386
Query: 422 NGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 387 DQPRAIALDPAHGYMYWTDWG 407
>gi|206725495|ref|NP_001128671.1| low-density lipoprotein receptor-related protein 5 precursor [Papio
anubis]
gi|198250309|gb|ACH85176.1| low density lipoprotein receptor-related protein 5 [Papio anubis]
Length = 1612
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 125/244 (51%), Gaps = 48/244 (19%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + LD
Sbjct: 97 QNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALD 156
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 157 PAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLS 214
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
FI +AN+DGS +V G L AL
Sbjct: 215 FIH----------------------------------RANLDGSFRQKVVEGSLTHPFAL 240
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L LY WTDW G R I+S +Y P + + R
Sbjct: 241 TLSGDTLY-----------WTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQER 288
Query: 381 RVYF 384
+ +F
Sbjct: 289 QPFF 292
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 148/344 (43%), Gaps = 71/344 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKG 89
C+ G CS+ C +P C CP G L ++ TC+ E+ ++ +
Sbjct: 295 RCEEDNGGCSHLCLLSPREPFYTCACPTGVQLQDNGRTCK--AGAEEVLLLARRTDLRRI 352
Query: 90 SYICSCNEGYVLEYDNHTCKAINHSAA----------FLIISNRHSILVADLEEKGKDHR 139
S VL+ D+ I H+ A + +I A L+ G
Sbjct: 353 SLDTPDFTDIVLQVDD-----IRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSG---- 403
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ +V + ++ +G+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR + L
Sbjct: 404 AQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIAL 463
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G ++WTDWGENP+IE +DG R +++ + WPNGL LD+ ++Y+ D+K
Sbjct: 464 HPVMGL--MYWTDWGENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYWGDAKT 521
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N+DG+ L+ +L
Sbjct: 522 D----------------------------------KIEVINVDGTKRRTLLEDKLPHIFG 547
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ ++R II
Sbjct: 548 FTLLGDFIY-----------WTDW-QRRSIERVHKVKASRDVII 579
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 115 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 163
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 164 ----WTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 219
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 220 NLDGSFRQKVVEGSLTHPFALTLSGD 245
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 148/349 (42%), Gaps = 95/349 (27%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE 132
E G CS +C + + Y C+C G L+ + TCKA + L+++ R
Sbjct: 298 EDNGGCSHLCLLSPREPFYTCACPTGVQLQDNGRTCKA--GAEEVLLLARR--------- 346
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
+ L RI + + T+ IVL D+I
Sbjct: 347 -----------------------------------TDLRRISLDTPDFTD-IVLQVDDIR 370
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
+ DP G +++WTD E I R +DGS T+++T+I P+G+ +D
Sbjct: 371 HAIAIDYDPLEG--YVYWTD-DEVRAIRRAYLDGSGAQTLVNTEINDPDGIAVDW----- 422
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+ R LYW D G + +I ++G++ ILVS
Sbjct: 423 -------------------------VARNLYWTDTGTD----RIEVTRLNGTSRKILVSE 453
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
L E A+ L M ++WTDWGENP+IE +DG R +++ + WPNG
Sbjct: 454 DLDEPRAIALHPVM---------GLMYWTDWGENPKIECANLDGQERRVLVNASLGWPNG 504
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
L LD+ ++Y+ D+K D I+ N DGT R+ ++ L F L+GD
Sbjct: 505 LALDLQEGKLYWGDAKTDKIEVINVDGTKRRTLLEDKLPHIFGFTLLGD 553
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 119/247 (48%), Gaps = 30/247 (12%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
C + G CS+ C TP C CP G E+LS DM C P +
Sbjct: 602 CADRNGGCSHLCFFTPHATRCGCPIGLELLS-------DMKTCIVPEAFLVFTSRAAIHR 654
Query: 92 ICSCNEGYVLEYDNHTCK----AINHSAAF-LIISNRHSILVADLEEKG------KDHRA 140
I LE +N+ + ++A +SN H I D+ K
Sbjct: 655 IS-------LETNNNDVAIPLTGVKEASALDFDVSNNH-IYWTDVSLKTISRAFMNGSSV 706
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ +V GLD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR + LD
Sbjct: 707 EHVVEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALD 766
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WT+WG PRI R MDG+N T++ K+ N LT+D A +R+Y+ D +
Sbjct: 767 PTKG--YIYWTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTN 823
Query: 261 FIDCKSL 267
I+ ++
Sbjct: 824 MIESSNM 830
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E ++
Sbjct: 652 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVVE 711
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 712 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 767
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 768 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 815
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ N G+++V++ D
Sbjct: 816 YWTDLDTNMIESSNM--LGQERVVIAD 840
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 138/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C + L+ + C F
Sbjct: 888 DILVFHSSRQDGLNDCMHNNGQCGQLCLAIPGGHRCGCASHHTLDPSSRNCSP---PTTF 944
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+++ GL V+ + YD + IYW+D R N I
Sbjct: 945 LLFSQKSAISRMIPD------DQHSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQN-I 997
Query: 174 EVCDENGTNRIVL-----AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT VL ++ QP + +D +R LFWT N I + G
Sbjct: 998 KRAKDDGTQPFVLTSLSQGQNPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLSGEA 1054
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1055 MGVVLRGDRDKPRAIVVNAERGYLYFTNMQ---------------------------DRA 1087
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A +DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1088 A-----KIERAALDGTEREVLFTTGLIRPVALVVDNTLGK---------LFWVD-ADLKR 1132
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT + + +Y+ D + I+
Sbjct: 1133 IESCDLSGANRLTLEDANIVQPLGLT--VLGKHLYWIDRQQQMIE 1175
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 141/357 (39%), Gaps = 62/357 (17%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 173 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 232
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 233 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQE 287
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
R+ +F + D C L + + R+ ++ GV L+ +
Sbjct: 288 RQPFFHTRCEEDNGGCSHLCLLSP-------REPFYTCACPTGVQLQDNGRTCKAGAEEV 340
Query: 309 LVSGQLYEALALDLENGMLYYSTLKC--------------TRWLFWTDWGENPRIERIGM 354
L+ + + + L+ L+ +++WTD E I R +
Sbjct: 341 LLLARRTDLRRISLDTPDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTD-DEVRAIRRAYL 399
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL---- 410
DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 400 DGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPR 459
Query: 411 --MVEFTNDLM-----GDN---------------------GVP-ALALDLENGMLYY 438
+ LM G+N G P LALDL+ G LY+
Sbjct: 460 AIALHPVMGLMYWTDWGENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYW 516
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N +L +N A +E D ++++ +GL L
Sbjct: 1056 GVVLRGDRDKPRAIVVNAERGYLYFTNMQD-RAAKIERAALDGTEREVLFTTGLIRPVAL 1114
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + + L+W D
Sbjct: 1115 VVDNTLGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPLGLTV----LGKHLYWID-R 1169
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T + ++ G+
Sbjct: 1170 QQQMIERVEKTTGDKRTRVQGRVAHLTGI 1198
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 306 ASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTI 362
++I+VSG L +A A+D + G +Y WTD E + + G+ +
Sbjct: 52 STIVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAVQNV 99
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 100 VISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------D 148
Query: 423 GVPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 149 QPRAIALDPAHGYMYWTDWG 168
>gi|410218114|gb|JAA06276.1| low density lipoprotein receptor-related protein 5 [Pan
troglodytes]
Length = 1614
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 125/244 (51%), Gaps = 48/244 (19%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + LD
Sbjct: 99 QNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALD 158
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 159 PAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLS 216
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
FI +AN+DGS +V G L AL
Sbjct: 217 FIH----------------------------------RANLDGSFRQKVVEGSLTHPFAL 242
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L LY WTDW G R I+S +Y P + + R
Sbjct: 243 TLSGDTLY-----------WTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQER 290
Query: 381 RVYF 384
+ +F
Sbjct: 291 QPFF 294
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 138/330 (41%), Gaps = 89/330 (26%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL-------------- 118
E G CS +C + ++ Y C+C G L+ + TCKA L
Sbjct: 300 EDNGGCSHLCLLSPSEPFYTCACPTGVQLQDNGRTCKAGAEEVLLLARRTDLRRISLDTP 359
Query: 119 --------IISNRHSILV-----------ADLEEKGKDHR------AQDIVVSGLDLVEG 153
+ RH+I + D E + AQ +V + ++ +G
Sbjct: 360 DFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLVNTEINDPDG 419
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR + L P G ++WTDW
Sbjct: 420 IAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIALHPVMGL--MYWTDW 477
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
GENP+IE +DG R +++ + WPNGL LD+ ++Y+ D+K D
Sbjct: 478 GENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYWGDAKTD------------- 524
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
KI N+DG+ L+ +L L +Y
Sbjct: 525 ---------------------KIEVINVDGTKRRTLLEDKLPHIFGFTLLGDFIY----- 558
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ ++R II
Sbjct: 559 ------WTDW-QRRSIERVHKVKASRDVII 581
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 117 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 165
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 166 ----WTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 221
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 222 NLDGSFRQKVVEGSLTHPFALTLSGD 247
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 119/247 (48%), Gaps = 30/247 (12%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
C + G CS+ C TP C CP G E+LS DM C P +
Sbjct: 604 CADRNGGCSHLCFFTPHATRCGCPIGLELLS-------DMKTCIVPEAFLVFTSRAAIHR 656
Query: 92 ICSCNEGYVLEYDNHTCK----AINHSAAF-LIISNRHSILVADLEEKG------KDHRA 140
I LE +N+ + ++A +SN H I D+ K
Sbjct: 657 IS-------LETNNNDVAIPLTGVKEASALDFDVSNNH-IYWTDVSLKTISRAFMNGSSV 708
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ +V GLD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR + LD
Sbjct: 709 EHVVEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALD 768
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WT+WG PRI R MDG+N T++ K+ N LT+D A +R+Y+ D +
Sbjct: 769 PTKG--YIYWTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTN 825
Query: 261 FIDCKSL 267
I+ ++
Sbjct: 826 MIESSNM 832
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E ++
Sbjct: 654 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVVE 713
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 714 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 769
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 770 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 817
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ N G+++V++ D
Sbjct: 818 YWTDLDTNMIESSNM--LGQERVVIAD 842
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 138/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C F
Sbjct: 890 DILVFHSSRQDGLNDCMHNNGQCGQLCLAIPGGHRCGCASHYTLDPSSRNCSP---PTTF 946
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+++ GL V+ + YD + IYW+D R N I
Sbjct: 947 LLFSQKSAISRMIPD------DQHSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQN-I 999
Query: 174 EVCDENGTNRIVL-----AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT VL ++ QP + +D +R LFWT N I + G
Sbjct: 1000 KRAKDDGTQPFVLTSLSQGQNPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLSGEA 1056
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1057 MGVVLRGDRDKPRAIVVNAERGYLYFTNMQ---------------------------DRA 1089
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A +DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1090 A-----KIERAALDGTEREVLFTTGLIRPVALVVDNTLGK---------LFWVD-ADLKR 1134
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT + + +Y+ D + I+
Sbjct: 1135 IESCDLSGANRLTLEDANIVQPLGLT--VLGKHLYWIDRQQQMIE 1177
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 139/330 (42%), Gaps = 44/330 (13%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 175 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 234
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 235 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQE 289
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG----------- 297
R+ +F + D C L + + + NG K G
Sbjct: 290 RQPFFHTRCEEDNGGCSHLCLLSPSEPFYTCACPTGVQLQDNGRTCKAGAEEVLLLARRT 349
Query: 298 ---KANMDGSNAS--ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+ ++D + + +L + A+A+D Y L+ +++WTD E I R
Sbjct: 350 DLRRISLDTPDFTDIVLQVDDIRHAIAID-------YDPLE--GYVYWTD-DEVRAIRRA 399
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 400 YLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDL-- 457
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+AL G++Y++ G
Sbjct: 458 ---------DEPRAIALHPVMGLMYWTDWG 478
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N +L +N A +E D ++++ +GL L
Sbjct: 1058 GVVLRGDRDKPRAIVVNAERGYLYFTNMQD-RAAKIERAALDGTEREVLFTTGLIRPVAL 1116
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + + L+W D
Sbjct: 1117 VVDNTLGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPLGLTV----LGKHLYWID-R 1171
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T I ++ G+
Sbjct: 1172 QQQMIERVEKTTGDKRTRIQGRVAHLTGI 1200
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 30/169 (17%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYS 330
++Y + +YW D+ I +A +DGS A LV+ ++ + +A+D
Sbjct: 377 IDYDPLEGYVYWTDDEVRA----IRRAYLDGSGAQTLVNTEINDPDGIAVDW-------- 424
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD-SKL 389
R L+WTD G + RIE ++G++R ++S + P + L +Y+ D +
Sbjct: 425 ---VARNLYWTDTGTD-RIEVTRLNGTSRKILVSEDLDEPRAIALHPVMGLMYWTDWGEN 480
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYY 438
I+ N DG R+ +L++ + + N LALDL+ G LY+
Sbjct: 481 PKIECANLDGQERR--VLVNASLGWPN---------GLALDLQEGKLYW 518
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 306 ASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTI 362
++I+VSG L +A A+D + G +Y WTD E + + G+ +
Sbjct: 54 STIVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAVQNV 101
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 102 VISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------D 150
Query: 423 GVPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 151 QPRAIALDPAHGYMYWTDWG 170
>gi|350579884|ref|XP_003480707.1| PREDICTED: low-density lipoprotein receptor-related protein 5-like
[Sus scrofa]
Length = 537
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 93/244 (38%), Positives = 126/244 (51%), Gaps = 48/244 (19%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + LD
Sbjct: 86 QNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALD 145
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWGE PRIER GMDGS+R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 146 PAHG--YMYWTDWGETPRIERAGMDGSSRKVIVDSDIYWPNGLTIDLEEQKLYWADAKLS 203
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
FI +AN+DGS +V G L AL
Sbjct: 204 FIH----------------------------------RANLDGSFRQKVVEGSLTHPFAL 229
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L LY WTDW G R I+S +Y P + + R
Sbjct: 230 TLSGDTLY-----------WTDWQTRSIHACNKRTGEKRKEILSA-LYSPMDIQVLSPER 277
Query: 381 RVYF 384
+ YF
Sbjct: 278 QPYF 281
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 88/147 (59%), Gaps = 17/147 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 104 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 152
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS+R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 153 ----WTDWGETPRIERAGMDGSSRKVIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 208
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGDN 422
N DG+ RQ+V+ L F L GD
Sbjct: 209 NLDGSFRQKVVEGSLTHPFALTLSGDT 235
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 123/239 (51%), Gaps = 15/239 (6%)
Query: 32 ECKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKG 89
C+ G CS+ C +P C CP G L + TC+ E+ ++ +
Sbjct: 284 RCEEDNGGCSHLCLLSPREPYYACACPTGVQLQGNGQTCK--AGAEEVLLLARRTDLRRI 341
Query: 90 SYICSCNEGYVLEYDN-HTCKAINHSA----AFLIISNRHSILVADLEEKGKDHRAQDIV 144
S VL+ D+ AI++ + +I A L+ G AQ +V
Sbjct: 342 SLDTPDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSG----AQTLV 397
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ ++ +G+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR ++L P G
Sbjct: 398 NTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMG 457
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
++WTDWGE+P+IE +DG R +++T + WPNGL LD+ ++Y+ D+K D I+
Sbjct: 458 L--MYWTDWGESPKIECAHLDGQERHVLVNTSLGWPNGLALDLQEGQLYWGDAKTDKIE 514
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 136/322 (42%), Gaps = 95/322 (29%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE 132
E G CS +C + + Y C+C G L+ + TCKA + L+++ R
Sbjct: 287 EDNGGCSHLCLLSPREPYYACACPTGVQLQGNGQTCKA--GAEEVLLLARR--------- 335
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
+ L RI + + T+ IVL D+I
Sbjct: 336 -----------------------------------TDLRRISLDTPDFTD-IVLQVDDIR 359
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
+ DP G +++WTD E I R +DGS T+++T+I P+G+ +D
Sbjct: 360 HAIAIDYDPLEG--YVYWTD-DEVRAIRRAYLDGSGAQTLVNTEINDPDGIAVDW----- 411
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+ R LYW D G + +I ++G++ ILVS
Sbjct: 412 -------------------------VARNLYWTDTGTD----RIEVTRLNGTSRKILVSE 442
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
L E A+ L M ++WTDWGE+P+IE +DG R +++T + WPNG
Sbjct: 443 DLDEPRAIVLHPVMGL---------MYWTDWGESPKIECAHLDGQERHVLVNTSLGWPNG 493
Query: 373 LTLDIATRRVYFADSKLDFIDF 394
L LD+ ++Y+ D+K D I+F
Sbjct: 494 LALDLQEGQLYWGDAKTDKIEF 515
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 158/389 (40%), Gaps = 83/389 (21%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D ++ ++V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 162 IERAGMDGSSRKVIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 221
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 222 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGEKRKEILSA-LYSPMDIQVLSPE 276
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYW-------IDEGGNGVPLKIG---- 297
R+ YF + D C L + + R+ Y+ + GNG K G
Sbjct: 277 RQPYFHTRCEEDNGGCSHLCLLSP-------REPYYACACPTGVQLQGNGQTCKAGAEEV 329
Query: 298 ----------KANMDGSNAS--ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
+ ++D + + +L + A+A+D Y L+ +++WTD E
Sbjct: 330 LLLARRTDLRRISLDTPDFTDIVLQVDDIRHAIAID-------YDPLEG--YVYWTD-DE 379
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
I R +DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ +
Sbjct: 380 VRAIRRAYLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKIL 439
Query: 406 ILIDL---MVEFTNDLMG-----------------------------DNGVP-ALALDLE 432
+ DL + +MG G P LALDL+
Sbjct: 440 VSEDLDEPRAIVLHPVMGLMYWTDWGESPKIECAHLDGQERHVLVNTSLGWPNGLALDLQ 499
Query: 433 NGMLYY---STEGAEFLKTPLFCITRNYF 458
G LY+ T+ EF P+ + + F
Sbjct: 500 EGQLYWGDAKTDKIEFTWRPVRVLRQLPF 528
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 26/141 (18%)
Query: 305 NASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRST 361
++I+VSG L +A A+D + G +Y WTD E + + G+
Sbjct: 40 ESTIVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAVQN 87
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL
Sbjct: 88 VVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL----------- 136
Query: 422 NGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 137 DQPRAIALDPAHGYMYWTDWG 157
>gi|119595112|gb|EAW74706.1| low density lipoprotein receptor-related protein 5, isoform CRA_b
[Homo sapiens]
Length = 1627
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 125/244 (51%), Gaps = 48/244 (19%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + LD
Sbjct: 100 QNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALD 159
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 160 PAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLS 217
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
FI +AN+DGS +V G L AL
Sbjct: 218 FIH----------------------------------RANLDGSFRQKVVEGSLTHPFAL 243
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L LY WTDW G R I+S +Y P + + R
Sbjct: 244 TLSGDTLY-----------WTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQER 291
Query: 381 RVYF 384
+ +F
Sbjct: 292 QPFF 295
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 138/330 (41%), Gaps = 89/330 (26%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL-------------- 118
E G CS +C + ++ Y C+C G L+ + TCKA L
Sbjct: 301 EDNGGCSHLCLLSPSEPFYTCACPTGVQLQDNGRTCKAGAEEVLLLARRTDLRRISLDTP 360
Query: 119 --------IISNRHSILV-----------ADLEEKGKDHR------AQDIVVSGLDLVEG 153
+ RH+I + D E + AQ +V + ++ +G
Sbjct: 361 DFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLVNTEINDPDG 420
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR + L P G ++WTDW
Sbjct: 421 IAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIALHPVMGL--MYWTDW 478
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
GENP+IE +DG R +++ + WPNGL LD+ ++Y+ D+K D
Sbjct: 479 GENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYWGDAKTD------------- 525
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
KI N+DG+ L+ +L L +Y
Sbjct: 526 ---------------------KIEVINVDGTKRRTLLEDKLPHIFGFTLLGDFIY----- 559
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ ++R II
Sbjct: 560 ------WTDW-QRRSIERVHKVKASRDVII 582
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 118 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 166
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 167 ----WTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 222
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 223 NLDGSFRQKVVEGSLTHPFALTLSGD 248
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 119/247 (48%), Gaps = 30/247 (12%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
C + G CS+ C TP C CP G E+LS DM C P +
Sbjct: 605 CADRNGGCSHLCFFTPHATRCGCPIGLELLS-------DMKTCIVPEAFLVFTSRAAIHR 657
Query: 92 ICSCNEGYVLEYDNHTCK----AINHSAAF-LIISNRHSILVADLEEKGKDH------RA 140
I LE +N+ + ++A +SN H I D+ K
Sbjct: 658 IS-------LETNNNDVAIPLTGVKEASALDFDVSNNH-IYWTDVSLKTISRAFMNGSSV 709
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ +V GLD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR + LD
Sbjct: 710 EHVVEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALD 769
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WT+WG PRI R MDG+N T++ K+ N LT+D A +R+Y+ D +
Sbjct: 770 PTKG--YIYWTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTN 826
Query: 261 FIDCKSL 267
I+ ++
Sbjct: 827 MIESSNM 833
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E ++
Sbjct: 655 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVVE 714
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 715 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 770
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 771 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 818
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ N G+++V++ D
Sbjct: 819 YWTDLDTNMIESSNM--LGQERVVIAD 843
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 139/355 (39%), Gaps = 75/355 (21%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C F
Sbjct: 891 DILVFHSSRQDGLNDCMHNNGQCGQLCLAIPGGHRCGCASHYTLDPSSRNCSP---PTTF 947
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+++ GL V+ + YD + IYW+D R N I
Sbjct: 948 LLFSQKSAISRMIPD------DQHSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQN-I 1000
Query: 174 EVCDENGTNRIVLAKDN-ITQP-------RGMMLDPSPG-------TRWLFWTDWGENPR 218
+ ++GT ++ + + QP +G D P +R LFWT N
Sbjct: 1001 KRAKDDGTQAVLRSLGFFVLQPFVLTSLSQGQNPDRQPHDLSIDIYSRTLFWTCEATN-T 1059
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
I + G ++ P + ++ +YF + +
Sbjct: 1060 INVHRLSGEAMGVVLRGDRDKPRAIVVNAERGYLYFTNMQ-------------------- 1099
Query: 279 FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWL 338
D KI +A +DG+ +L + L +AL ++N + L
Sbjct: 1100 -------DRAA-----KIERAALDGTEREVLFTTGLIRPVALVVDNTLGK---------L 1138
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
FW D + RIE + G+NR T+ I P GLT I + +Y+ D + I+
Sbjct: 1139 FWVD-ADLKRIESCDLSGANRLTLEDANIVQPLGLT--ILGKHLYWIDRQQQMIE 1190
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 139/330 (42%), Gaps = 44/330 (13%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 176 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 235
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 236 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQE 290
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG----------- 297
R+ +F + D C L + + + NG K G
Sbjct: 291 RQPFFHTRCEEDNGGCSHLCLLSPSEPFYTCACPTGVQLQDNGRTCKAGAEEVLLLARRT 350
Query: 298 ---KANMDGSNAS--ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+ ++D + + +L + A+A+D Y L+ +++WTD E I R
Sbjct: 351 DLRRISLDTPDFTDIVLQVDDIRHAIAID-------YDPLE--GYVYWTD-DEVRAIRRA 400
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 401 YLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDL-- 458
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+AL G++Y++ G
Sbjct: 459 ---------DEPRAIALHPVMGLMYWTDWG 479
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N +L +N A +E D ++++ +GL L
Sbjct: 1071 GVVLRGDRDKPRAIVVNAERGYLYFTNMQD-RAAKIERAALDGTEREVLFTTGLIRPVAL 1129
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + + L+W D
Sbjct: 1130 VVDNTLGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPLGLTI----LGKHLYWID-R 1184
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T I ++ G+
Sbjct: 1185 QQQMIERVEKTTGDKRTRIQGRVAHLTGI 1213
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 30/169 (17%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYS 330
++Y + +YW D+ I +A +DGS A LV+ ++ + +A+D
Sbjct: 378 IDYDPLEGYVYWTDDEVRA----IRRAYLDGSGAQTLVNTEINDPDGIAVDW-------- 425
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD-SKL 389
R L+WTD G + RIE ++G++R ++S + P + L +Y+ D +
Sbjct: 426 ---VARNLYWTDTGTD-RIEVTRLNGTSRKILVSEDLDEPRAIALHPVMGLMYWTDWGEN 481
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYY 438
I+ N DG R+ +L++ + + N LALDL+ G LY+
Sbjct: 482 PKIECANLDGQERR--VLVNASLGWPN---------GLALDLQEGKLYW 519
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 306 ASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTI 362
++I+VSG L +A A+D + G +Y WTD E + + G+ +
Sbjct: 55 STIVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAVQNV 102
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 103 VISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------D 151
Query: 423 GVPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 152 QPRAIALDPAHGYMYWTDWG 171
>gi|119709832|ref|NP_002326.2| low-density lipoprotein receptor-related protein 5 precursor [Homo
sapiens]
gi|62512139|sp|O75197.2|LRP5_HUMAN RecName: Full=Low-density lipoprotein receptor-related protein 5;
Short=LRP-5; Flags: Precursor
gi|3831748|gb|AAC72791.1| LDL receptor member LR3 [Homo sapiens]
gi|119595111|gb|EAW74705.1| low density lipoprotein receptor-related protein 5, isoform CRA_a
[Homo sapiens]
gi|187956357|gb|AAI50596.1| Low density lipoprotein receptor-related protein 5 [Homo sapiens]
Length = 1615
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 125/244 (51%), Gaps = 48/244 (19%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + LD
Sbjct: 100 QNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALD 159
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 160 PAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLS 217
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
FI +AN+DGS +V G L AL
Sbjct: 218 FIH----------------------------------RANLDGSFRQKVVEGSLTHPFAL 243
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L LY WTDW G R I+S +Y P + + R
Sbjct: 244 TLSGDTLY-----------WTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQER 291
Query: 381 RVYF 384
+ +F
Sbjct: 292 QPFF 295
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 138/330 (41%), Gaps = 89/330 (26%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL-------------- 118
E G CS +C + ++ Y C+C G L+ + TCKA L
Sbjct: 301 EDNGGCSHLCLLSPSEPFYTCACPTGVQLQDNGRTCKAGAEEVLLLARRTDLRRISLDTP 360
Query: 119 --------IISNRHSILV-----------ADLEEKGKDHR------AQDIVVSGLDLVEG 153
+ RH+I + D E + AQ +V + ++ +G
Sbjct: 361 DFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLVNTEINDPDG 420
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR + L P G ++WTDW
Sbjct: 421 IAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIALHPVMGL--MYWTDW 478
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
GENP+IE +DG R +++ + WPNGL LD+ ++Y+ D+K D
Sbjct: 479 GENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYWGDAKTD------------- 525
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
KI N+DG+ L+ +L L +Y
Sbjct: 526 ---------------------KIEVINVDGTKRRTLLEDKLPHIFGFTLLGDFIY----- 559
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ ++R II
Sbjct: 560 ------WTDW-QRRSIERVHKVKASRDVII 582
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 118 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 166
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 167 ----WTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 222
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 223 NLDGSFRQKVVEGSLTHPFALTLSGD 248
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 119/247 (48%), Gaps = 30/247 (12%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
C + G CS+ C TP C CP G E+LS DM C P +
Sbjct: 605 CADRNGGCSHLCFFTPHATRCGCPIGLELLS-------DMKTCIVPEAFLVFTSRAAIHR 657
Query: 92 ICSCNEGYVLEYDNHTCK----AINHSAAF-LIISNRHSILVADLEEKG------KDHRA 140
I LE +N+ + ++A +SN H I D+ K
Sbjct: 658 IS-------LETNNNDVAIPLTGVKEASALDFDVSNNH-IYWTDVSLKTISRAFMNGSSV 709
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ +V GLD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR + LD
Sbjct: 710 EHVVEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALD 769
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WT+WG PRI R MDG+N T++ K+ N LT+D A +R+Y+ D +
Sbjct: 770 PTKG--YIYWTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTN 826
Query: 261 FIDCKSL 267
I+ ++
Sbjct: 827 MIESSNM 833
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 138/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C F
Sbjct: 891 DILVFHSSRQDGLNDCMHNNGQCGQLCLAIPGGHRCGCASHYTLDPSSRNCSP---PTTF 947
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+++ GL V+ + YD + IYW+D R N I
Sbjct: 948 LLFSQKSAISRMIPD------DQHSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQN-I 1000
Query: 174 EVCDENGTNRIVL-----AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT VL ++ QP + +D +R LFWT N I + G
Sbjct: 1001 KRAKDDGTQPFVLTSLSQGQNPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLSGEA 1057
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1058 MGVVLRGDRDKPRAIVVNAERGYLYFTNMQ---------------------------DRA 1090
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A +DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1091 A-----KIERAALDGTEREVLFTTGLIRPVALVVDNTLGK---------LFWVD-ADLKR 1135
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT I + +Y+ D + I+
Sbjct: 1136 IESCDLSGANRLTLEDANIVQPLGLT--ILGKHLYWIDRQQQMIE 1178
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E ++
Sbjct: 655 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVVE 714
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 715 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 770
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 771 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 818
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ N G+++V++ D
Sbjct: 819 YWTDLDTNMIESSNM--LGQERVVIAD 843
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 139/330 (42%), Gaps = 44/330 (13%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 176 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 235
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 236 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQE 290
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG----------- 297
R+ +F + D C L + + + NG K G
Sbjct: 291 RQPFFHTRCEEDNGGCSHLCLLSPSEPFYTCACPTGVQLQDNGRTCKAGAEEVLLLARRT 350
Query: 298 ---KANMDGSNAS--ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+ ++D + + +L + A+A+D Y L+ +++WTD E I R
Sbjct: 351 DLRRISLDTPDFTDIVLQVDDIRHAIAID-------YDPLE--GYVYWTD-DEVRAIRRA 400
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 401 YLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDL-- 458
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+AL G++Y++ G
Sbjct: 459 ---------DEPRAIALHPVMGLMYWTDWG 479
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N +L +N A +E D ++++ +GL L
Sbjct: 1059 GVVLRGDRDKPRAIVVNAERGYLYFTNMQD-RAAKIERAALDGTEREVLFTTGLIRPVAL 1117
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + + L+W D
Sbjct: 1118 VVDNTLGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPLGLTI----LGKHLYWID-R 1172
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T I ++ G+
Sbjct: 1173 QQQMIERVEKTTGDKRTRIQGRVAHLTGI 1201
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 30/169 (17%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYS 330
++Y + +YW D+ I +A +DGS A LV+ ++ + +A+D
Sbjct: 378 IDYDPLEGYVYWTDDEVRA----IRRAYLDGSGAQTLVNTEINDPDGIAVDW-------- 425
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD-SKL 389
R L+WTD G + RIE ++G++R ++S + P + L +Y+ D +
Sbjct: 426 ---VARNLYWTDTGTD-RIEVTRLNGTSRKILVSEDLDEPRAIALHPVMGLMYWTDWGEN 481
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYY 438
I+ N DG R+ +L++ + + N LALDL+ G LY+
Sbjct: 482 PKIECANLDGQERR--VLVNASLGWPN---------GLALDLQEGKLYW 519
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 306 ASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTI 362
++I+VSG L +A A+D + G +Y WTD E + + G+ +
Sbjct: 55 STIVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAVQNV 102
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 103 VISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------D 151
Query: 423 GVPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 152 QPRAIALDPAHGYMYWTDWG 171
>gi|410352627|gb|JAA42917.1| low density lipoprotein receptor-related protein 5 [Pan
troglodytes]
Length = 1614
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 125/244 (51%), Gaps = 48/244 (19%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + LD
Sbjct: 99 QNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALD 158
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 159 PAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLS 216
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
FI +AN+DGS +V G L AL
Sbjct: 217 FIH----------------------------------RANLDGSFRQKVVEGSLTHPFAL 242
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L LY WTDW G R I+S +Y P + + R
Sbjct: 243 TLSGDTLY-----------WTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQER 290
Query: 381 RVYF 384
+ +F
Sbjct: 291 QPFF 294
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 138/330 (41%), Gaps = 89/330 (26%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL-------------- 118
E G CS +C + ++ Y C+C G L+ + TCKA L
Sbjct: 300 EDNGGCSHLCLLSPSEPFYTCACPTGVQLQDNGRTCKAGAEEVLLLARRTDLRRISLDTP 359
Query: 119 --------IISNRHSILV-----------ADLEEKGKDHR------AQDIVVSGLDLVEG 153
+ RH+I + D E + AQ +V + ++ +G
Sbjct: 360 DFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLVNTEINDPDG 419
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR + L P G ++WTDW
Sbjct: 420 IAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIALHPVMGL--MYWTDW 477
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
GENP+IE +DG R +++ + WPNGL LD+ ++Y+ D+K D
Sbjct: 478 GENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYWGDAKTD------------- 524
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
KI N+DG+ L+ +L L +Y
Sbjct: 525 ---------------------KIEVINVDGTKRRTLLEDKLPHIFGFTLLGDFIY----- 558
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ ++R II
Sbjct: 559 ------WTDW-QRRSIERVHKVKASRDVII 581
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 117 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 165
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 166 ----WTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 221
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 222 NLDGSFRQKVVEGSLTHPFALTLSGD 247
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 119/247 (48%), Gaps = 30/247 (12%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
C + G CS+ C TP C CP G E+LS DM C P +
Sbjct: 604 CADRNGGCSHLCFFTPHATRCGCPIGLELLS-------DMKTCIVPEAFLVFTSRAAIHR 656
Query: 92 ICSCNEGYVLEYDNHTCK----AINHSAAF-LIISNRHSILVADLEEKG------KDHRA 140
I LE +N+ + ++A +SN H I D+ K
Sbjct: 657 IS-------LETNNNDVAIPLTGVKEASALDFDVSNNH-IYWTDVSLKTISRAFMNGSSV 708
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ +V GLD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR + LD
Sbjct: 709 EHVVEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALD 768
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WT+WG PRI R MDG+N T++ K+ N LT+D A +R+Y+ D +
Sbjct: 769 PTKG--YIYWTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTN 825
Query: 261 FIDCKSL 267
I+ ++
Sbjct: 826 MIESSNM 832
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E ++
Sbjct: 654 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVVE 713
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 714 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 769
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 770 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 817
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ N G+++V++ D
Sbjct: 818 YWTDLDTNMIESSNM--LGQERVVIAD 842
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 138/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C F
Sbjct: 890 DILVFHSSRQDGLNDCMHNNGQCGQLCLAIPGGHRCGCASHYTLDPSSRNCSP---PTTF 946
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+++ GL V+ + YD + IYW+D R N I
Sbjct: 947 LLFSQKSAISRMIPD------DQHSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQN-I 999
Query: 174 EVCDENGTNRIVL-----AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT VL ++ QP + +D +R LFWT N I + G
Sbjct: 1000 KRAKDDGTQPFVLTSLSQGQNPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLSGEA 1056
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1057 MGVVLRGDRDKPRAIVVNAERGYLYFTNMQ---------------------------DRA 1089
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A +DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1090 A-----KIERAALDGTEREVLFTTGLIRPVALVVDNTLGK---------LFWVD-ADLKR 1134
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT + + +Y+ D + I+
Sbjct: 1135 IESCDLSGANRLTLEDANIVQPLGLT--VLGKHLYWIDRQQQMIE 1177
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 139/330 (42%), Gaps = 44/330 (13%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 175 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 234
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 235 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQE 289
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG----------- 297
R+ +F + D C L + + + NG K G
Sbjct: 290 RQPFFHTRCEEDNGGCSHLCLLSPSEPFYTCACPTGVQLQDNGRTCKAGAEEVLLLARRT 349
Query: 298 ---KANMDGSNAS--ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+ ++D + + +L + A+A+D Y L+ +++WTD E I R
Sbjct: 350 DLRRISLDTPDFTDIVLQVDDIRHAIAID-------YDPLE--GYVYWTD-DEVRAIRRA 399
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 400 YLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDL-- 457
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+AL G++Y++ G
Sbjct: 458 ---------DEPRAIALHPVMGLMYWTDWG 478
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N +L +N A +E D ++++ +GL L
Sbjct: 1058 GVVLRGDRDKPRAIVVNAERGYLYFTNMQD-RAAKIERAALDGTEREVLFTTGLIRPVAL 1116
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + + L+W D
Sbjct: 1117 VVDNTLGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPLGLTV----LGKHLYWID-R 1171
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T I ++ G+
Sbjct: 1172 QQQMIERVEKTTGDKRTRIQGRVAHLTGI 1200
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 30/169 (17%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYS 330
++Y + +YW D+ I +A +DGS A LV+ ++ + +A+D
Sbjct: 377 IDYDPLEGYVYWTDDEVRA----IRRAYLDGSGAQTLVNTEINDPDGIAVDW-------- 424
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD-SKL 389
R L+WTD G + RIE ++G++R ++S + P + L +Y+ D +
Sbjct: 425 ---VARNLYWTDTGTD-RIEVTRLNGTSRKILVSEDLDEPRAIALHPVMGLMYWTDWGEN 480
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYY 438
I+ N DG R+ +L++ + + N LALDL+ G LY+
Sbjct: 481 PKIECANLDGQERR--VLVNASLGWPN---------GLALDLQEGKLYW 518
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 306 ASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTI 362
++I+VSG L +A A+D + G +Y WTD E + + G+ +
Sbjct: 54 STIVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAVQNV 101
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 102 VISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------D 150
Query: 423 GVPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 151 QPRAIALDPAHGYMYWTDWG 170
>gi|14028618|gb|AAK52433.1| low density lipoprotein receptor-related protein 5 [Homo sapiens]
Length = 1611
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 125/244 (51%), Gaps = 48/244 (19%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + LD
Sbjct: 100 QNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALD 159
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 160 PAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLS 217
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
FI +AN+DGS +V G L AL
Sbjct: 218 FIH----------------------------------RANLDGSFRQKVVEGSLTHPFAL 243
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L LY WTDW G R I+S +Y P + + R
Sbjct: 244 TLSGDTLY-----------WTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQER 291
Query: 381 RVYF 384
+ +F
Sbjct: 292 QPFF 295
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 138/330 (41%), Gaps = 89/330 (26%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL-------------- 118
E G CS +C + ++ Y C+C G L+ + TCKA L
Sbjct: 301 EDNGGCSHLCLLSPSEPFYTCACPTGVQLQDNGRTCKAGAEEVLLLARRTDLRRISLDTP 360
Query: 119 --------IISNRHSILV-----------ADLEEKGKDHR------AQDIVVSGLDLVEG 153
+ RH+I + D E + AQ +V + ++ +G
Sbjct: 361 DFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLVNTEINDPDG 420
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR + L P G ++WTDW
Sbjct: 421 IAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIALHPVMGL--MYWTDW 478
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
GENP+IE +DG R +++ + WPNGL LD+ ++Y+ D+K D
Sbjct: 479 GENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYWGDAKTD------------- 525
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
KI N+DG+ L+ +L L +Y
Sbjct: 526 ---------------------KIEVINVDGTKRRTLLEDKLPHIFGFTLLGDFIY----- 559
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ ++R II
Sbjct: 560 ------WTDW-QRRSIERVHKVKASRDVII 582
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 118 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 166
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 167 ----WTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 222
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 223 NLDGSFRQKVVEGSLTHPFALTLSGD 248
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 119/247 (48%), Gaps = 30/247 (12%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
C + G CS+ C TP C CP G E+LS DM C P +
Sbjct: 605 CADRNGGCSHLCFFTPHATRCGCPIGLELLS-------DMKTCIVPEAFLVFTSRAAIHR 657
Query: 92 ICSCNEGYVLEYDNHTCK----AINHSAAF-LIISNRHSILVADLEEKG------KDHRA 140
I LE +N+ + ++A +SN H I D+ K
Sbjct: 658 IS-------LETNNNDVAIPLTGVKEASALDFDVSNNH-IYWTDVSLKTISRAFMNGSSV 709
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ +V GLD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR + LD
Sbjct: 710 EHVVEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALD 769
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WT+WG PRI R MDG+N T++ K+ N LT+D A +R+Y+ D +
Sbjct: 770 PTKG--YIYWTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTN 826
Query: 261 FIDCKSL 267
I+ ++
Sbjct: 827 MIESSNM 833
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 138/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C F
Sbjct: 891 DILVFHSSRQDGLNDCMHNNGQCGQLCLAIPGGHRCGCASHYTLDPSSRNCSP---PTTF 947
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+++ GL V+ + YD + IYW+D R N I
Sbjct: 948 LLFSQKSAISRMIPD------DQHSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQN-I 1000
Query: 174 EVCDENGTNRIVL-----AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT VL ++ QP + +D +R LFWT N I + G
Sbjct: 1001 KRAKDDGTQPFVLTSLSQGQNPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLSGEA 1057
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1058 MGVVLRGDRDKPRAIVVNAERGYLYFTNMQ---------------------------DRA 1090
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A +DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1091 A-----KIERAALDGTEREVLFTTGLIRPVALVVDNTLGK---------LFWVD-ADLKR 1135
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT I + +Y+ D + I+
Sbjct: 1136 IESCDLSGANRLTLEDANIVQPLGLT--ILGKHLYWIDRQQQMIE 1178
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E ++
Sbjct: 655 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVVE 714
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 715 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 770
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 771 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 818
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ N G+++V++ D
Sbjct: 819 YWTDLDTNMIESSNM--LGQERVVIAD 843
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 139/330 (42%), Gaps = 44/330 (13%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 176 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 235
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 236 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQE 290
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG----------- 297
R+ +F + D C L + + + NG K G
Sbjct: 291 RQPFFHTRCEEDNGGCSHLCLLSPSEPFYTCACPTGVQLQDNGRTCKAGAEEVLLLARRT 350
Query: 298 ---KANMDGSNAS--ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+ ++D + + +L + A+A+D Y L+ +++WTD E I R
Sbjct: 351 DLRRISLDTPDFTDIVLQVDDIRHAIAID-------YDPLE--GYVYWTD-DEVRAIRRA 400
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 401 YLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDL-- 458
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+AL G++Y++ G
Sbjct: 459 ---------DEPRAIALHPVMGLMYWTDWG 479
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N +L +N A +E D ++++ +GL L
Sbjct: 1059 GVVLRGDRDKPRAIVVNAERGYLYFTNMQD-RAAKIERAALDGTEREVLFTTGLIRPVAL 1117
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + + L+W D
Sbjct: 1118 VVDNTLGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPLGLTI----LGKHLYWID-R 1172
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T I ++ G+
Sbjct: 1173 QQQMIERVEKTTGDKRTRIQGRVAHLTGI 1201
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 30/169 (17%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYS 330
++Y + +YW D+ I +A +DGS A LV+ ++ + +A+D
Sbjct: 378 IDYDPLEGYVYWTDDEVRA----IRRAYLDGSGAQTLVNTEINDPDGIAVDW-------- 425
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD-SKL 389
R L+WTD G + RIE ++G++R ++S + P + L +Y+ D +
Sbjct: 426 ---VARNLYWTDTGTD-RIEVTRLNGTSRKILVSEDLDEPRAIALHPVMGLMYWTDWGEN 481
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYY 438
I+ N DG R+ +L++ + + N LALDL+ G LY+
Sbjct: 482 PKIECANLDGQERR--VLVNASLGWPN---------GLALDLQEGKLYW 519
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 306 ASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTI 362
++I+VSG L +A A+D + G +Y WTD E + + G+ +
Sbjct: 55 STIVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAVQNV 102
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 103 VISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------D 151
Query: 423 GVPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 152 QPRAIALDPAHGYMYWTDWG 171
>gi|3641527|gb|AAC36467.1| low-density lipoprotein receptor-related protein 5 [Homo sapiens]
Length = 1615
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 125/244 (51%), Gaps = 48/244 (19%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + LD
Sbjct: 100 QNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALD 159
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 160 PAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLS 217
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
FI +AN+DGS +V G L AL
Sbjct: 218 FIH----------------------------------RANLDGSFRQKVVEGSLTHPFAL 243
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L LY WTDW G R I+S +Y P + + R
Sbjct: 244 TLSGDTLY-----------WTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQER 291
Query: 381 RVYF 384
+ +F
Sbjct: 292 QPFF 295
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 138/330 (41%), Gaps = 89/330 (26%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL-------------- 118
E G CS +C + ++ Y C+C G L+ + TCKA L
Sbjct: 301 EDNGGCSHLCLLSPSEPFYTCACPTGVQLQDNGRTCKAGAEEVLLLARRTDLRRISLDTP 360
Query: 119 --------IISNRHSILV-----------ADLEEKGKDHR------AQDIVVSGLDLVEG 153
+ RH+I + D E + AQ +V + ++ +G
Sbjct: 361 DFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLVNTEINDPDG 420
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR + L P G ++WTDW
Sbjct: 421 IAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIALHPVMGL--MYWTDW 478
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
GENP+IE +DG R +++ + WPNGL LD+ ++Y+ D+K D
Sbjct: 479 GENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYWGDAKTD------------- 525
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
KI N+DG+ L+ +L L +Y
Sbjct: 526 ---------------------KIEVINVDGTKRRTLLEDKLPHIFGFTLLGDFIY----- 559
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ ++R II
Sbjct: 560 ------WTDW-QRRSIERVHKVKASRDVII 582
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 118 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 166
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 167 ----WTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 222
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 223 NLDGSFRQKVVEGSLTHPFALTLSGD 248
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 119/247 (48%), Gaps = 30/247 (12%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
C + G CS+ C TP C CP G E+LS DM C P +
Sbjct: 605 CADRNGGCSHLCFFTPHATRCGCPIGLELLS-------DMKTCIVPEAFLVFTSRAAIHR 657
Query: 92 ICSCNEGYVLEYDNHTCK----AINHSAAF-LIISNRHSILVADLEEKG------KDHRA 140
I LE +N+ + ++A +SN H I D+ K
Sbjct: 658 IS-------LETNNNDVAIPLTGVKEASALDFDVSNNH-IYWTDVSLKTISRAFMNGSSV 709
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ +V GLD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR + LD
Sbjct: 710 EHVVEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALD 769
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WT+WG PRI R MDG+N T++ K+ N LT+D A +R+Y+ D +
Sbjct: 770 PTKG--YIYWTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTN 826
Query: 261 FIDCKSL 267
I+ ++
Sbjct: 827 MIESSNM 833
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 138/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C F
Sbjct: 891 DILVFHSSRQDGLNDCMHNNGQCGQLCLAIPGGHRCGCASHYTLDPSSRNCSP---PTTF 947
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+++ GL V+ + YD + IYW+D R N I
Sbjct: 948 LLFSQKSAISRMIPD------DQHSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQN-I 1000
Query: 174 EVCDENGTNRIVL-----AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT VL ++ QP + +D +R LFWT N I + G
Sbjct: 1001 KRAKDDGTQPFVLTSLSQGQNPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLSGEA 1057
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1058 MGVVLRGDRDKPRAIVVNAERGYLYFTNMQ---------------------------DRA 1090
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A +DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1091 A-----KIERAALDGTEREVLFTTGLIRPVALVVDNTLGK---------LFWVD-ADLKR 1135
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT I + +Y+ D + I+
Sbjct: 1136 IESCDLSGANRLTLEDANIVQPLGLT--ILGKHLYWIDRQQQMIE 1178
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E ++
Sbjct: 655 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVVE 714
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 715 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 770
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 771 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 818
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ N G+++V++ D
Sbjct: 819 YWTDLDTNMIESSNM--LGQERVVIAD 843
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 139/330 (42%), Gaps = 44/330 (13%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 176 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 235
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 236 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQE 290
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG----------- 297
R+ +F + D C L + + + NG K G
Sbjct: 291 RQPFFHTRCEEDNGGCSHLCLLSPSEPFYTCACPTGVQLQDNGRTCKAGAEEVLLLARRT 350
Query: 298 ---KANMDGSNAS--ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+ ++D + + +L + A+A+D Y L+ +++WTD E I R
Sbjct: 351 DLRRISLDTPDFTDIVLQVDDIRHAIAID-------YDPLE--GYVYWTD-DEVRAIRRA 400
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 401 YLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDL-- 458
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+AL G++Y++ G
Sbjct: 459 ---------DEPRAIALHPVMGLMYWTDWG 479
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N +L +N A +E D ++++ +GL L
Sbjct: 1059 GVVLRGDRDKPRAIVVNAERGYLYFTNMQD-RAAKIERAALDGTEREVLFTTGLIRPVAL 1117
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + + L+W D
Sbjct: 1118 VVDNTLGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPLGLTI----LGKHLYWID-R 1172
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T I ++ G+
Sbjct: 1173 QQQMIERVEKTTGDKRTRIQGRVAHLTGI 1201
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 30/169 (17%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYS 330
++Y + +YW D+ I +A +DGS A LV+ ++ + +A+D
Sbjct: 378 IDYDPLEGYVYWTDDEVRA----IRRAYLDGSGAQTLVNTEINDPDGIAVDW-------- 425
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD-SKL 389
R L+WTD G + RIE ++G++R ++S + P + L +Y+ D +
Sbjct: 426 ---VARNLYWTDTGTD-RIEVTRLNGTSRKILVSEDLDEPRAIALHPVMGLMYWTDWGEN 481
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYY 438
I+ N DG R+ +L++ + + N LALDL+ G LY+
Sbjct: 482 PKIECANLDGQERR--VLVNASLGWPN---------GLALDLQEGKLYW 519
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 306 ASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTI 362
++I+VSG L +A A+D + G +Y WTD E + + G+ +
Sbjct: 55 STIVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAVQNV 102
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 103 VISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------D 151
Query: 423 GVPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 152 QPRAIALDPAHGYMYWTDWG 171
>gi|3582145|dbj|BAA33051.1| Lipoprotein Receptor Related Protein 5 [Homo sapiens]
Length = 1615
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 125/244 (51%), Gaps = 48/244 (19%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + LD
Sbjct: 100 QNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALD 159
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 160 PAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLS 217
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
FI +AN+DGS +V G L AL
Sbjct: 218 FIH----------------------------------RANLDGSFRQKVVEGSLTHPFAL 243
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L LY WTDW G R I+S +Y P + + R
Sbjct: 244 TLSGDTLY-----------WTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQER 291
Query: 381 RVYF 384
+ +F
Sbjct: 292 QPFF 295
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 138/330 (41%), Gaps = 89/330 (26%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL-------------- 118
E G CS +C + ++ Y C+C G L+ + TCKA L
Sbjct: 301 EDNGGCSHLCLLSPSEPFYTCACPTGVQLQDNGRTCKAGAEEVLLLARRTDLRRISLDTP 360
Query: 119 --------IISNRHSILV-----------ADLEEKGKDHR------AQDIVVSGLDLVEG 153
+ RH+I + D E + AQ +V + ++ +G
Sbjct: 361 DFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLVNTEINDPDG 420
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR + L P G ++WTDW
Sbjct: 421 IAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIALHPVMGL--MYWTDW 478
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
GENP+IE +DG R +++ + WPNGL LD+ ++Y+ D+K D
Sbjct: 479 GENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYWGDAKTD------------- 525
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
KI N+DG+ L+ +L L +Y
Sbjct: 526 ---------------------KIEVINVDGTKRRTLLEDKLPHIFGFTLLGDFIY----- 559
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ ++R II
Sbjct: 560 ------WTDW-QRRSIERVHKVKASRDVII 582
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 118 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 166
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 167 ----WTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 222
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 223 NLDGSFRQKVVEGSLTHPFALTLSGD 248
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 119/247 (48%), Gaps = 30/247 (12%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
C + G CS+ C TP C CP G E+LS DM C P +
Sbjct: 605 CADRNGGCSHLCFFTPHATRCGCPIGLELLS-------DMKTCIVPEAFLVFTSRAAIHR 657
Query: 92 ICSCNEGYVLEYDNHTCK----AINHSAAF-LIISNRHSILVADLEEKG------KDHRA 140
I LE +N+ + ++A +SN H I D+ K
Sbjct: 658 IS-------LETNNNDVAIPLTGVKEASALDFDVSNNH-IYWTDVSLKTISRAFMNGSSV 709
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ +V GLD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR + LD
Sbjct: 710 EHVVEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALD 769
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WT+WG PRI R MDG+N T++ K+ N LT+D A +R+Y+ D +
Sbjct: 770 PTKG--YIYWTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTN 826
Query: 261 FIDCKSL 267
I+ ++
Sbjct: 827 MIESSNM 833
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 138/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C F
Sbjct: 891 DILVFHSSRQDGLNDCMHNNGQCGQLCLAIPGGHRCGCASHYTLDPSSRNCSP---PTTF 947
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+++ GL V+ + YD + IYW+D R N I
Sbjct: 948 LLFSQKSAISRMIPD------DQHSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQN-I 1000
Query: 174 EVCDENGTNRIVL-----AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT VL ++ QP + +D +R LFWT N I + G
Sbjct: 1001 KRAKDDGTQPFVLTSLSQGQNPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLSGEA 1057
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1058 MGVVLRGDRDKPRAIVVNAERGYLYFTNMQ---------------------------DRA 1090
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A +DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1091 A-----KIERAALDGTEREVLFTTGLIRPVALVVDNTLGK---------LFWVD-ADLKR 1135
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT I + +Y+ D + I+
Sbjct: 1136 IESCDLSGANRLTLEDANIVQPLGLT--ILGKHLYWIDRQQQMIE 1178
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E ++
Sbjct: 655 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVVE 714
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 715 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 770
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 771 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 818
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ N G+++V++ D
Sbjct: 819 YWTDLDTNMIESSNM--LGQERVVIAD 843
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 139/330 (42%), Gaps = 44/330 (13%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 176 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 235
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 236 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQE 290
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG----------- 297
R+ +F + D C L + + + NG K G
Sbjct: 291 RQPFFHTRCEEDNGGCSHLCLLSPSEPFYTCACPTGVQLQDNGRTCKAGAEEVLLLARRT 350
Query: 298 ---KANMDGSNAS--ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+ ++D + + +L + A+A+D Y L+ +++WTD E I R
Sbjct: 351 DLRRISLDTPDFTDIVLQVDDIRHAIAID-------YDPLE--GYVYWTD-DEVRAIRRA 400
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 401 YLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDL-- 458
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+AL G++Y++ G
Sbjct: 459 ---------DEPRAIALHPVMGLMYWTDWG 479
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N +L +N A +E D ++++ +GL L
Sbjct: 1059 GVVLRGDRDKPRAIVVNAERGYLYFTNMQD-RAAKIERAALDGTEREVLFTTGLIRPVAL 1117
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + + L+W D
Sbjct: 1118 VVDNTLGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPLGLTI----LGKHLYWID-R 1172
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T I ++ G+
Sbjct: 1173 QQQMIERVEKTTGDKRTRIQGRVAHLTGI 1201
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 30/169 (17%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYS 330
++Y + +YW D+ I +A +DGS A LV+ ++ + +A+D
Sbjct: 378 IDYDPLEGYVYWTDDEVRA----IRRAYLDGSGAQTLVNTEINDPDGIAVDW-------- 425
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD-SKL 389
R L+WTD G + RIE ++G++R ++S + P + L +Y+ D +
Sbjct: 426 ---VARNLYWTDTGTD-RIEVTRLNGTSRKILVSEDLDEPRAIALHPVMGLMYWTDWGEN 481
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYY 438
I+ N DG R+ +L++ + + N LALDL+ G LY+
Sbjct: 482 PKIECANLDGQERR--VLVNASLGWPN---------GLALDLQEGKLYW 519
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 306 ASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTI 362
++I+VSG L +A A+D + G +Y WTD E + + G+ +
Sbjct: 55 STIVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAVQNV 102
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 103 VISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------D 151
Query: 423 GVPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 152 QPRAIALDPAHGYMYWTDWG 171
>gi|3170549|gb|AAC34396.1| LRP1 [Takifugu rubripes]
Length = 1581
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 165/354 (46%), Gaps = 92/354 (25%)
Query: 53 CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN 112
C C PG L D TC D++EC CSQ C NT GS+ C C +G+ L ++ T I
Sbjct: 1 CRCHPGFQLKRDGRTCVDIDECTTTYPCSQRCINTHGSFHCLCVDGFELSPNDPT---IC 57
Query: 113 HSAAFLIISNRHSILVADLE-------EKGKD-------HRAQDIVV------------- 145
+LI +NR+ + +L+ ++G + H A+ ++
Sbjct: 58 KRRTYLIFANRYYLRKLNLDGSNYTLIKQGLNNAVALDFHYAEQMIYWTDVTTQGSMIRR 117
Query: 146 -------------SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
+ L +GLA DW+GG++YW D + IEV NG R VL +
Sbjct: 118 MRMNGSSMEVLHRTSLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVNSGLR 177
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
+PR + +D G +L+W+DWG++P I RIGMDG+NRS I+ KI WPNGLTLD R+
Sbjct: 178 EPRALAVDVRYG--YLYWSDWGDSPHIGRIGMDGTNRSVIVEEKITWPNGLTLDFINDRI 235
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD++ D+I+ A++DG+N +++
Sbjct: 236 YWADAREDYIE----------------------------------FASLDGTNRHTVLNH 261
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIST 365
+ A+ L +++WTDW E I R G+N++T+IST
Sbjct: 262 DIPHIFAMTLFE-----------EYIYWTDW-ETKSINRAHKTQGTNKTTLIST 303
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 184/435 (42%), Gaps = 94/435 (21%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSN----TCHPTPLGALCT 54
+RC++ T C+ DC + + GC L +C+ C + C + C+
Sbjct: 781 NRCISSTLRCNFFNDCEDFGSDEIGCKTDTKLTDCRSNRTQCGDGDEAHCVTNGTDSFCS 840
Query: 55 CPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHS 114
C G TC D NEC Q G CS +C NTKGSY CSC++ + D TCKA N
Sbjct: 841 CKAG-FQKIGHRTCGDKNECLQFGVCSHICNNTKGSYKCSCHKYFTRISD--TCKADN-- 895
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
I S+R + +AD E + LD G+ DW + D+ + RI+
Sbjct: 896 ----INSSRQILYIADDNE-----------IRSLD--PGMP-DWRYEQTFQGDASV-RID 936
Query: 175 VCDEN-GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
D + TNRI FWT+W RI + G + S
Sbjct: 937 AMDVHVKTNRI------------------------FWTNW-HTGRISTYELQGPSLSATS 971
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
S + R ++ ++ + K L++ + + LYW D G + +
Sbjct: 972 SN------------SHRNRRQSEGRVIDLQIKELKMPRGIAVDWVAGNLYWTDSGRDVIE 1019
Query: 294 LKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
+ A M G + L+SG + E A+ +D + G +Y W DWG +P+IE
Sbjct: 1020 V----AQMSGQHCKTLISGMIDEPYAIVVDPQRGTMY-----------WADWGNHPKIET 1064
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI--- 408
MDG+ R T++ I WP GL +D R+Y+AD+KL I DG+ VI +
Sbjct: 1065 AAMDGTLRQTLVHENIQWPTGLAVDYYNERLYWADAKLSVIGSVRLDGS--DPVIAVSGI 1122
Query: 409 --DLMVEFTNDLMGD 421
+L+ F+ D+ D
Sbjct: 1123 KNNLLHPFSIDIFED 1137
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 111/217 (51%), Gaps = 31/217 (14%)
Query: 219 IERIGMDGSNRSTI--------------ISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
+ ++ +DGSN + I IYW + T RR+ S ++ +
Sbjct: 71 LRKLNLDGSNYTLIKQGLNNAVALDFHYAEQMIYWTDVTTQGSMIRRMRMNGSSMEVLHR 130
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDL 322
SL + + LYW D+G + + + + ++G+ ++LV+ L E ALA+D+
Sbjct: 131 TSLSNPDGLAVDWVGGNLYWCDKGRDTIEV----SKLNGAYRTVLVNSGLREPRALAVDV 186
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G LY W+DWG++P I RIGMDG+NRS I+ KI WPNGLTLD R+
Sbjct: 187 RYGYLY-----------WSDWGDSPHIGRIGMDGTNRSVIVEEKITWPNGLTLDFINDRI 235
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLM 419
Y+AD++ D+I+F + DGT R V+ D+ F L
Sbjct: 236 YWADAREDYIEFASLDGTNRHTVLNHDIPHIFAMTLF 272
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGM 354
+ K N+DGSN +++ G L A+ALD +Y+ + ++WTD + I R+ M
Sbjct: 71 LRKLNLDGSNYTLIKQG-LNNAVALDF-----HYAE----QMIYWTDVTTQGSMIRRMRM 120
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
+GS+ + T + P+GL +D +Y+ D D I+ +G R +L++
Sbjct: 121 NGSSMEVLHRTSLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYR--TVLVN----- 173
Query: 415 TNDLMGDNGVPALALDLENGMLYYSTEG 442
G ALA+D+ G LY+S G
Sbjct: 174 ----SGLREPRALAVDVRYGYLYWSDWG 197
>gi|426252590|ref|XP_004019989.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 5 [Ovis aries]
Length = 1612
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 125/245 (51%), Gaps = 48/245 (19%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + L
Sbjct: 78 VQNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIAL 137
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 138 DPAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKL 195
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
FI +AN+DGS +V G L A
Sbjct: 196 SFIH----------------------------------RANLDGSFRQKVVEGSLTHPFA 221
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L L LY WTDW G R I+S +Y P + +
Sbjct: 222 LTLSGDTLY-----------WTDWQTRSIHACNKRTGDKRKEILSA-LYSPMDIQVLSPE 269
Query: 380 RRVYF 384
R+ Y+
Sbjct: 270 RQPYY 274
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 139/306 (45%), Gaps = 67/306 (21%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI------ 126
E G CS +C + + Y C+C G L+ D TCKA + L+++ R +
Sbjct: 280 EDNGGCSHLCLLSPREPFYACACPTGVQLQDDGQTCKA--GAEEVLLLARRTDLRRISLD 337
Query: 127 ---------LVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
V D+ AQ +V + ++ +G+A DW+ ++YW D+ +RIEV
Sbjct: 338 TPDFTDIVLQVDDIRHAIAGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTR 397
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
NGT+R +L +++ +PR ++L P G ++WTDWGENP+IE +DG R +++T +
Sbjct: 398 LNGTSRKILVSEDLDEPRAIVLHPVMGL--MYWTDWGENPKIECANLDGQERHVLVNTSL 455
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
WPNGL LD+ ++Y+ D+K D KI
Sbjct: 456 GWPNGLALDLQEGKLYWGDAKTD----------------------------------KIE 481
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGS 357
N+DG+ L+ +L L +Y WTDW + IER+ +
Sbjct: 482 VINVDGTKRRTLLEDKLPHIFGFTLLGDFIY-----------WTDW-QRRSIERVHKVKA 529
Query: 358 NRSTII 363
+R II
Sbjct: 530 SRDVII 535
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 97 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 145
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 146 ----WTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 201
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 202 NLDGSFRQKVVEGSLTHPFALTLSGD 227
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 121/249 (48%), Gaps = 34/249 (13%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPG----YCSQMC--- 84
C + G CS+ C TP C CP G E+LS DM C P + S+
Sbjct: 558 CADRNGGCSHLCFFTPRATKCGCPIGLELLS-------DMKTCIVPEAFLVFTSRAAIHR 610
Query: 85 ------TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH 138
N + E L++D ++++ + + +I A + +H
Sbjct: 611 ISLDTNNNDVAIPLTGVKEASALDFD------VSNNHIYWTDVSLKTISRAFMNGSSVEH 664
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
++ GLD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR +
Sbjct: 665 ----VIEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLA 720
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
LDP+ G +++WT+WG PRI R MDG+N T++ K+ N LT+D A +R+Y+ D
Sbjct: 721 LDPTKG--YIYWTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLD 777
Query: 259 LDFIDCKSL 267
+ I+ ++
Sbjct: 778 TNMIESSNM 786
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 43/201 (21%)
Query: 221 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFR 280
R + GS T+++T+I P+G+ +D + R
Sbjct: 352 RHAIAGSGAQTLVNTEINDPDGIAVDW------------------------------VAR 381
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFW 340
LYW D G + +I ++G++ ILVS L E A+ L M ++W
Sbjct: 382 NLYWTDTGTD----RIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGL---------MYW 428
Query: 341 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
TDWGENP+IE +DG R +++T + WPNGL LD+ ++Y+ D+K D I+ N DGT
Sbjct: 429 TDWGENPKIECANLDGQERHVLVNTSLGWPNGLALDLQEGKLYWGDAKTDKIEVINVDGT 488
Query: 401 GRQQVILIDLMVEFTNDLMGD 421
R+ ++ L F L+GD
Sbjct: 489 KRRTLLEDKLPHIFGFTLLGD 509
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI +D +N I T + + L D++ +Y+ D L F++ S+E I+
Sbjct: 608 IHRISLDTNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIE 667
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 668 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 723
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 724 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 771
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ N G+++V++ D
Sbjct: 772 YWTDLDTNMIESSNM--LGQERVVIAD 796
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N +L +N A +E D ++++ +GL L
Sbjct: 1018 GVVLRGDRDKPRAIVVNAERGYLYFTNMQD-RAAKIERAALDGTEREVLFTTGLIRPVAL 1076
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + + L+WTD
Sbjct: 1077 VVDNTLGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPVGLTV----LGKHLYWTD-R 1131
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ + T + ++ G+
Sbjct: 1132 QQQMIERVDKTTGDARTRVQGRVAHLTGI 1160
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 118/286 (41%), Gaps = 63/286 (22%)
Query: 117 FLIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNR 172
FL+ S + +I ++ D D + D+++ GL V+ + YD + IYW+D R N
Sbjct: 906 FLLFSQKCAISRMIPD------DQHSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQN- 958
Query: 173 IEVCDENGTNRIVL-----AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227
I+ ++GT VL +++ QP + +D +R LFWT N I ++G
Sbjct: 959 IKRAKDDGTQPFVLTSPGQSQNPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLNGD 1015
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDE 287
++ P + ++ +YF + + D
Sbjct: 1016 AMGVVLRGDRDKPRAIVVNAERGYLYFTNMQ---------------------------DR 1048
Query: 288 GGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
KI +A +DG+ +L + L +AL ++N + LFW D +
Sbjct: 1049 AA-----KIERAALDGTEREVLFTTGLIRPVALVVDNTLGK---------LFWVD-ADLK 1093
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
RIE + G+NR T+ I P GLT + + +Y+ D + I+
Sbjct: 1094 RIESCDLSGANRLTLEDANIVQPVGLT--VLGKHLYWTDRQQQMIE 1137
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 139/346 (40%), Gaps = 66/346 (19%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 155 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 214
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 215 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGDKRKEILSA-LYSPMDIQVLSPE 269
Query: 250 RRVYFA----------------DSKLDFIDCK---SLEIKTN-------------VNYST 277
R+ Y+ + F C ++++ + + T
Sbjct: 270 RQPYYHTRCEEDNGGCSHLCLLSPREPFYACACPTGVQLQDDGQTCKAGAEEVLLLARRT 329
Query: 278 IFRKLYWIDEGGNGVPLKIG--KANMDGSNASILVSGQL--YEALALDLENGMLYYSTLK 333
R++ + L++ + + GS A LV+ ++ + +A+D
Sbjct: 330 DLRRISLDTPDFTDIVLQVDDIRHAIAGSGAQTLVNTEINDPDGIAVDW----------- 378
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD-SKLDFI 392
R L+WTD G + RIE ++G++R ++S + P + L +Y+ D + I
Sbjct: 379 VARNLYWTDTGTD-RIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGLMYWTDWGENPKI 437
Query: 393 DFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYY 438
+ N DG R +L++ + + N LALDL+ G LY+
Sbjct: 438 ECANLDGQERH--VLVNTSLGWPN---------GLALDLQEGKLYW 472
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIE 350
+++G A ++I+VSG L +A A+D + G +Y WTD E +
Sbjct: 22 VRLGDAGGXQVESTIVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQT 69
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ G+ ++ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL
Sbjct: 70 YLNQTGAAVQNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL 129
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 130 -----------DQPRAIALDPAHGYMYWTDWG 150
>gi|410974748|ref|XP_003993804.1| PREDICTED: low-density lipoprotein receptor-related protein 5
[Felis catus]
Length = 1720
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 124/244 (50%), Gaps = 48/244 (19%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + LD
Sbjct: 205 QNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALD 264
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 265 PAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLS 322
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
FI +AN+DGS +V G L AL
Sbjct: 323 FIH----------------------------------RANLDGSFRQKVVEGSLTHPFAL 348
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L LY WTDW + I + I +Y P + + R
Sbjct: 349 TLSGDTLY-----------WTDW-QTRSIHACNKKTGEKRKEILRALYSPMDIQVLSPER 396
Query: 381 RVYF 384
+ YF
Sbjct: 397 QPYF 400
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 137/330 (41%), Gaps = 89/330 (26%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN---------- 122
E G CS +C + + Y C+C G L+ + TCKA L
Sbjct: 406 EDNGGCSHLCLLSPREPFYTCACPTGVQLQDNGKTCKAGAEEVLLLARRTDLRRISLDTP 465
Query: 123 ------------RHSILV-----------ADLEEKGKDHR------AQDIVVSGLDLVEG 153
RH+I + D E + AQ +V + ++ +G
Sbjct: 466 DFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLVNTEINDPDG 525
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR ++L P G ++WTDW
Sbjct: 526 IAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGL--MYWTDW 583
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
GENP+IE +DG R +++T + WPNGL LD+ ++Y+ D+K D
Sbjct: 584 GENPKIECANLDGQERHVLVNTSLGWPNGLALDLQEGKLYWGDAKTD------------- 630
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
KI N+DG+ L+ +L L +Y
Sbjct: 631 ---------------------KIEVINVDGTKRRTLLEDKLPHIFGFTLLGDFIY----- 664
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ + R II
Sbjct: 665 ------WTDW-QRRSIERVHKVKATRDVII 687
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 87/147 (59%), Gaps = 17/147 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 223 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 271
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 272 ----WTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 327
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGDN 422
N DG+ RQ+V+ L F L GD
Sbjct: 328 NLDGSFRQKVVEGSLTHPFALTLSGDT 354
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 107/240 (44%), Gaps = 51/240 (21%)
Query: 68 CQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL 127
C D N G CS +C T + C C G L D TC AFL+ ++R +I
Sbjct: 710 CADKN-----GGCSHLCFFTPRATKCGCPIGLELLSDTKTCIV---PEAFLVFTSRAAIH 761
Query: 128 VADLEEKGKD----------------------------------------HRAQDIVVSG 147
LE D + ++ G
Sbjct: 762 RISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIEFG 821
Query: 148 LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
LD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR + LDP+ G +
Sbjct: 822 LDYPEGMAVDWMGQNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTKG--Y 879
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
++WT+WG PRI R MDG+N T++ K+ N LT+D A +R+Y+ D + I+ +
Sbjct: 880 VYWTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTNMIESSDM 938
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E I+
Sbjct: 760 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIE 819
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 820 FGLDYPEGMAVDWMGQNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 875
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 876 TKGYVY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 923
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ + D G+++V++ D
Sbjct: 924 YWTDLDTNMIE--SSDMLGQERVVIAD 948
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 139/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C F
Sbjct: 996 DILVFHSSRQDGLNDCTHNNGQCGQLCLAIPGGHRCGCASHYTLDPSSRNCSP---PTTF 1052
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+++ GL V+ + YD + IYW+D R N I
Sbjct: 1053 LLFSQKCAISRMIPD------DQHSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQN-I 1105
Query: 174 EVCDENGTNRIVLAKDNITQ-----PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT VL + +Q P + +D +R LFWT N I ++G
Sbjct: 1106 KRAKDDGTQPFVLTSPSQSQNPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLNGDA 1162
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF TN+
Sbjct: 1163 MGVVLRGDRDKPRAIVVNAERGYLYF----------------TNMQDRAA---------- 1196
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A +DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1197 ------KIERAALDGTEREVLFTTGLIRPVALVVDNRLGK---------LFWVD-ADLKR 1240
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT + + +Y+ D + I+
Sbjct: 1241 IESCDLSGANRLTLEDASIVQPVGLT--VLGQHLYWIDRQQQMIE 1283
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 146/357 (40%), Gaps = 62/357 (17%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 281 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 340
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW + I + I +Y P + +
Sbjct: 341 SLTHPFALTLSGDT----LYWTDW-QTRSIHACNKKTGEKRKEILRALYSPMDIQVLSPE 395
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI-GKANMDGSNAS 307
R+ YF D C L + + R+ ++ GV L+ GK G+
Sbjct: 396 RQPYFHTRCAEDNGGCSHLCLLSP-------REPFYTCACPTGVQLQDNGKTCKAGAEEV 448
Query: 308 ILVSGQL-YEALALDLENGMLYYSTLKCTR------------WLFWTDWGENPRIERIGM 354
+L++ + ++LD + + R +++WTD E I R +
Sbjct: 449 LLLARRTDLRRISLDTPDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTD-DEVRAIRRAYL 507
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL---- 410
DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 508 DGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPR 567
Query: 411 --MVEFTNDLM-----GDN---------------------GVP-ALALDLENGMLYY 438
++ LM G+N G P LALDL+ G LY+
Sbjct: 568 AIVLHPVMGLMYWTDWGENPKIECANLDGQERHVLVNTSLGWPNGLALDLQEGKLYW 624
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 208 LFWTDWGENPRIERIGMD--GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC- 264
++WTD E I++I ++ G+ ++ + + P+GL D +++Y+ DS+ + I+
Sbjct: 182 VYWTDVSEE-AIKQIYLNQTGAAVQNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVA 240
Query: 265 ------------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+ L+ + +YW D G +I +A MDGS I+V
Sbjct: 241 NLNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGETP---RIERAGMDGSTRKIIVDS 297
Query: 313 QLY--EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 370
+Y L +DLE LY++ K + I R +DGS R ++ + P
Sbjct: 298 DIYWPNGLTIDLEEQKLYWADAKLS------------FIHRANLDGSFRQKVVEGSLTHP 345
Query: 371 NGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
LTL T +Y+ D + I CN +++ IL L
Sbjct: 346 FALTLSGDT--LYWTDWQTRSIHACNKKTGEKRKEILRAL 383
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N +L +N A +E D ++++ +GL L
Sbjct: 1164 GVVLRGDRDKPRAIVVNAERGYLYFTNMQD-RAAKIERAALDGTEREVLFTTGLIRPVAL 1222
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L +I QP G+ + + L+W D
Sbjct: 1223 VVDNRLGKLFWVDADLKRIESCDLSGANRLTLEDASIVQPVGLTV----LGQHLYWID-R 1277
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T + ++ G+
Sbjct: 1278 QQQMIERVEKTTGDKRTRVQGRVAHLTGI 1306
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 71/141 (50%), Gaps = 28/141 (19%)
Query: 306 ASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENPRIERIGMD--GSNRST 361
++++VSG L +A A+D + G +Y WTD E I++I ++ G+
Sbjct: 160 STVVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEE-AIKQIYLNQTGAAVQN 206
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL
Sbjct: 207 VVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL----------- 255
Query: 422 NGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 256 DQPRAIALDPAHGYMYWTDWG 276
>gi|431910175|gb|ELK13248.1| Low-density lipoprotein receptor-related protein 5 [Pteropus
alecto]
Length = 1616
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 123/244 (50%), Gaps = 48/244 (19%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q +V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + LD
Sbjct: 99 QSVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAVALD 158
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 159 PAHG--YMYWTDWGETPRIERAGMDGSTRKVIVDSDIYWPNGLTIDLEEQKLYWADAKLS 216
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
FI +AN+DGS +V G L AL
Sbjct: 217 FIH----------------------------------RANLDGSFRQKVVEGSLTHPFAL 242
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L LY WTDW G R I+ +Y P + + R
Sbjct: 243 TLSGDTLY-----------WTDWQTRSIHACNKRTGEKRREILGA-LYSPMDIQVLSPER 290
Query: 381 RVYF 384
+ YF
Sbjct: 291 QPYF 294
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 142/334 (42%), Gaps = 90/334 (26%)
Query: 72 NECEQP-GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL---------- 118
+CE+ G CS +C + + Y C+C G L+ + TCKA L
Sbjct: 296 TQCEEDNGGCSHLCLLSPREPFYTCACPTGVQLQDNGKTCKAGAEEVLLLARRTDLRRIS 355
Query: 119 ------------IISNRHSILV-----------ADLEEKGKDHR------AQDIVVSGLD 149
+ RH+I + D E + AQ +V + ++
Sbjct: 356 LDTPDFTDIVMQVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLVNTEIN 415
Query: 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
+G+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR ++L P G ++
Sbjct: 416 DPDGIAVDWVARNLYWTDTGTDRIEVARLNGTSRKILVSEDLDEPRAIVLHPVMGL--MY 473
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEI 269
WTDWGENP+IE +DG R +++T + WPNGL LD+ +VY+ D+K D
Sbjct: 474 WTDWGENPKIECADLDGQERHVLVNTSLGWPNGLALDLQEGKVYWGDAKTD--------- 524
Query: 270 KTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
KI N+DG+ L+ +L L +Y
Sbjct: 525 -------------------------KIEVINVDGTKRRTLLEDKLPHIFGFTLLGDFIY- 558
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ ++R II
Sbjct: 559 ----------WTDW-QRRSIERVHKVKASRDVII 581
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 87/147 (59%), Gaps = 17/147 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 117 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAVALDPAHGYMY------- 165
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 166 ----WTDWGETPRIERAGMDGSTRKVIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 221
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGDN 422
N DG+ RQ+V+ L F L GD
Sbjct: 222 NLDGSFRQKVVEGSLTHPFALTLSGDT 248
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 108/240 (45%), Gaps = 51/240 (21%)
Query: 68 CQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL 127
C D N G CS +C T + C C G L D TC AFL+ ++R +I
Sbjct: 604 CADRN-----GGCSHLCFFTPHATKCGCPIGLELLSDMKTCIV---PEAFLVFTSRAAIH 655
Query: 128 VADLEEKGKD----------------------------------------HRAQDIVVSG 147
LE D + ++ G
Sbjct: 656 RISLETSSNDVAIPLTGVKEASALDFDVSSGHIYWTDVSLKTISRAFMNGSSVEHVIEFG 715
Query: 148 LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
LD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR + LDP+ G +
Sbjct: 716 LDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTKG--Y 773
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
++WT+WG PRI R MDG+N T++ K+ N LT+D A +R+Y+ D + I+ ++
Sbjct: 774 IYWTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTNMIESSNM 832
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 130/338 (38%), Gaps = 98/338 (28%)
Query: 71 MNECEQP-GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI--L 127
+N+C G C Q+C G CSC Y L+ C + FL+ S +++I +
Sbjct: 902 LNDCVHSNGQCGQLCLAIPGGRRCSCASHYTLDPSGRNCSP---PSTFLLFSQKNAISRM 958
Query: 128 VADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
+ D D + D+++ GL V+ + YD + IYW+D R N I
Sbjct: 959 IPD------DQHSPDLMLPLHGLRNVKAIDYDPLDKFIYWVDGRQN------------IK 1000
Query: 186 LAKDNITQPRGMML-DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
AKD+ TQ +L PSP +NP + P+ L+
Sbjct: 1001 RAKDDGTQASPSILTSPSPN----------QNPDRQ-------------------PHDLS 1031
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D+ YS R L+W E N + + + N D
Sbjct: 1032 IDV---------------------------YS---RTLFWTCEATNTI--NVHRLNGDAM 1059
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+ A+ ++ E G LY++ ++ +IER +DG+ R + +
Sbjct: 1060 GVVLRGDRDKPRAIVVNAERGYLYFTNMQ----------EPAAKIERTALDGTEREVLFT 1109
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
T + P L +D A ++++ D+ L I+ C+ G R
Sbjct: 1110 TGLIRPVALVVDNALGKLFWVDADLKRIESCDLSGANR 1147
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 128/296 (43%), Gaps = 29/296 (9%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + ++V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 175 IERAGMDGSTRKVIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 234
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+ +Y P + +
Sbjct: 235 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGEKRREILGA-LYSPMDIQVLSPE 289
Query: 250 RRVYF-ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI-GKANMDGSNAS 307
R+ YF + D C L + + R+ ++ GV L+ GK G+
Sbjct: 290 RQPYFHTQCEEDNGGCSHLCLLSP-------REPFYTCACPTGVQLQDNGKTCKAGAEEV 342
Query: 308 ILVSGQL-YEALALDLENGMLYYSTLKCTR------------WLFWTDWGENPRIERIGM 354
+L++ + ++LD + + R +++WTD E I R +
Sbjct: 343 LLLARRTDLRRISLDTPDFTDIVMQVDDIRHAIAIDYDPLEGYVYWTD-DEVRAIRRAYL 401
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 402 DGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVARLNGTSRKILVSEDL 457
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 33/216 (15%)
Query: 208 LFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC-- 264
++WTD E + + G+ +++ + + P+GL D +++Y+ DS+ + I+
Sbjct: 76 VYWTDVSEEAIKQTYLNQTGAAVQSVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVAN 135
Query: 265 -----------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+ L+ V +YW D G +I +A MDGS ++V
Sbjct: 136 LNGTSRKVLFWQDLDQPRAVALDPAHGYMYWTDWGETP---RIERAGMDGSTRKVIVDSD 192
Query: 314 LY--EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
+Y L +DLE LY++ K + I R +DGS R ++ + P
Sbjct: 193 IYWPNGLTIDLEEQKLYWADAKLS------------FIHRANLDGSFRQKVVEGSLTHPF 240
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
LTL T +Y+ D + I CN +++ IL
Sbjct: 241 ALTLSGDT--LYWTDWQTRSIHACNKRTGEKRREIL 274
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N +L +N A +E D ++++ +GL L
Sbjct: 1060 GVVLRGDRDKPRAIVVNAERGYLYFTNMQEP-AAKIERTALDGTEREVLFTTGLIRPVAL 1118
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L N+ QP G+ + R L+W D
Sbjct: 1119 VVDNALGKLFWVDADLKRIESCDLSGANRLTLEDANVVQPVGLAV----LGRHLYWID-R 1173
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T + ++ G+
Sbjct: 1174 QQQMIERVEKTSGDKRTRVQGRVAHLTGI 1202
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 26/141 (18%)
Query: 305 NASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRST 361
++++VSG L +A A+D + G +Y WTD E + + G+ +
Sbjct: 53 ESTVVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAVQS 100
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL
Sbjct: 101 VVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL----------- 149
Query: 422 NGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 150 DQPRAVALDPAHGYMYWTDWG 170
>gi|390370788|ref|XP_001187156.2| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Strongylocentrotus purpuratus]
Length = 624
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 155/298 (52%), Gaps = 42/298 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ VC+ + DC +G DE C + EC++ C + C T CTC G L+
Sbjct: 6 ECILQELVCNNEVDCSDGLDEYR-CGVNECENNATGCQHDCVNTANSYYCTCDTGFRLNP 64
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC +++EC + P CSQ+C NT GSY+C C +GY LE D +CK + +I SN
Sbjct: 65 DRRTCAEIDECSDMPELCSQVCENTIGSYLCKCVDGYTLETDGKSCKHNSGIDPLIIFSN 124
Query: 123 RHSI-----------LVADLEEKGK----DHRAQDIVVSGL------------------- 148
+ + L+AD + D+R + V +
Sbjct: 125 SYYVRSLSLDGRDYNLIADDFQGAVALDFDYRESRLFVLDVFRAHIVRMWMNGTDREVII 184
Query: 149 -DLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
D V EG++ DW+G +YW+DS + +EV + +G+ R L + QPR ++++P G
Sbjct: 185 DDFVNGGEGMSVDWVGRKLYWVDSVNDVMEVAELDGSQRKTLVYTGMDQPRAVVVNPKHG 244
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+++WTDWG + I R+GMDG++++ I K+ +PNGLT+D A R+Y+ D+ L+ I
Sbjct: 245 --YVYWTDWGLDAHIGRVGMDGTDKTRIHDNKMVFPNGLTIDYAAERLYWCDAHLNHI 300
>gi|354478194|ref|XP_003501300.1| PREDICTED: low-density lipoprotein receptor-related protein 6-like
[Cricetulus griseus]
Length = 1593
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 115/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 98 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 157
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGSNR +I+T+IYWPNGLTLD R++
Sbjct: 158 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSNRFVVINTEIYWPNGLTLDYEERKL 215
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 216 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 241
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 242 SLPHPFALTLFEDTLY-----------WTDW 261
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 127 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 172
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGSNR +I+T+IYWPNGLTLD R++Y+AD+KL+FI N D
Sbjct: 173 -WTDWGEVPKIERAGMDGSNRFVVINTEIYWPNGLTLDYEERKLYWADAKLNFIHKSNLD 231
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 232 GTNRQAVVKGSLPHPFALTLFED 254
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 570 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 626
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 627 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 686
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 687 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 744
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 745 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 800
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 622 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 681
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 682 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 737
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 738 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 785
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 786 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 816
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 148/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 871 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 927
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI + L V + YD + +YW+DSR N I E+G +
Sbjct: 928 VIDEQ----QSPDITLPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGGQGFTVV 983
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I+ +DG + ++ + P
Sbjct: 984 VSSVPNQNLEIQPYDLSIDIY--SRYIYWTCEATN-VIDVTRLDGRSIGVVLKGEQDRPR 1040
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1041 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1068
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1069 DGTEREVLFFSGLSKPIALALDSKLGK---------LFWAD-SDLRRIESSDLSGANRIV 1118
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1119 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1171
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 126/283 (44%), Gaps = 23/283 (8%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 413 SQFVVTAQIAHPDGIAVDWAARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 472
Query: 200 DPSPGTRWLFWTDWGENP--RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
DP G WG+ +IE + DG+ R ++ KI P+ + VY+ D
Sbjct: 473 DPMVGXXXXXXXXWGDAKTNKIEVMNTDGTGRRVLVEDKI--PHIFGFTLLGDYVYWTDW 530
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN-MDGSNASILVSGQ--- 313
+ I+ V+ + R++ ID+ + + LK + + GSN +G
Sbjct: 531 QRRSIE--------RVHKRSADREVI-IDQLPDLMGLKATSVHRVIGSNPCAEENGGCSH 581
Query: 314 --LY--EALALDLENGMLYYSTLK-CTRWLFWTDWGENPRIERIGMDGSNRSTIIS-TKI 367
LY + L G S +K C + + I RI ++ +N + I T +
Sbjct: 582 LCLYRPQGLRCACPIGFELISDMKTCIVPEAFLLFSRRADIRRISLETNNNNVAIPLTGV 641
Query: 368 YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ L D+ R+Y+ D L I +G+ + V+ L
Sbjct: 642 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGL 684
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 112/290 (38%), Gaps = 54/290 (18%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G CS +C + K Y C+C G L + TCK + + L+++ R + L+
Sbjct: 310 GGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCK--DGATELLLLARRTDLRRISLDTPD 367
Query: 136 KDHRAQDIVVSGLDLVEGLA--YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
DIV+ D+ +A YD + G+IYW D + I +G+ + I
Sbjct: 368 ----FTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAH 423
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
P G+ +D + R L+WTD G + RIE ++G+ R +IS + P + LD
Sbjct: 424 PDGIAVDWA--ARNLYWTDTGTD-RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVG--- 477
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
W D N KI N DG+ +LV +
Sbjct: 478 ----------------------XXXXXXXXWGDAKTN----KIEVMNTDGTGRRVLVEDK 511
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+ L +Y WTDW + IER+ ++R II
Sbjct: 512 IPHIFGFTLLGDYVY-----------WTDW-QRRSIERVHKRSADREVII 549
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYS 330
++Y + +YW D+ I ++ +DGS + +V+ Q+ + +A+D
Sbjct: 384 IDYDPVEGYIYWTDDEVRA----IRRSFIDGSGSQFVVTAQIAHPDGIAVDW-------- 431
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-----IATRRVYFA 385
R L+WTD G + RIE ++G+ R +IS + P + LD +
Sbjct: 432 ---AARNLYWTDTGTD-RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGXXXXXXXXWG 487
Query: 386 DSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
D+K + I+ N DGTGR+ ++ + F L+GD
Sbjct: 488 DAKTNKIEVMNTDGTGRRVLVEDKIPHIFGFTLLGD 523
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 123/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 753 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 811
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 812 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 866
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 867 QAGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 926
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DG T++
Sbjct: 927 MVIDEQQSPDITLPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGGQGFTVV 983
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + ID DG V
Sbjct: 984 VSSVPNQNLEIQPYDLSIDIYSRYIYWTCEATNVIDVTRLDGRSIGVV------------ 1031
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1032 LKGEQDRPRAIVVNPEKGYMYFT 1054
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 23/150 (15%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
L++ A NA+I+V G L +A A+D G ++W+D E I+R
Sbjct: 50 LRLVDATNGKENATIVVGG-LEDAAAVDFVFGH---------GLIYWSDVSEEA-IKRTE 98
Query: 354 MDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 99 FNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL-- 156
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 157 ---------DQPRAIALDPSSGFMYWTDWG 177
>gi|119923053|ref|XP_614220.3| PREDICTED: low-density lipoprotein receptor-related protein 5,
partial [Bos taurus]
Length = 1802
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 125/244 (51%), Gaps = 48/244 (19%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + LD
Sbjct: 287 QNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALD 346
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 347 PAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLS 404
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
FI +AN+DGS +V G L AL
Sbjct: 405 FIH----------------------------------RANLDGSFRQKVVEGSLTHPFAL 430
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L LY WTDW G R I+S +Y P + + R
Sbjct: 431 TLSGDTLY-----------WTDWQTRSIHACNKRTGDKRKEILSA-LYSPMDIQVLSPER 478
Query: 381 RVYF 384
+ Y+
Sbjct: 479 QPYY 482
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 139/330 (42%), Gaps = 89/330 (26%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL-------------- 118
E G CS +C + + Y C+C G L+ + TCKA L
Sbjct: 488 EDNGGCSHLCLLSPREPFYACACPTGVQLQDNGQTCKAGAEEVLLLARRTDLRRISLDTP 547
Query: 119 --------IISNRHSILV-----------ADLEEKGKDHR------AQDIVVSGLDLVEG 153
+ RH+I + D E + AQ +V + ++ +G
Sbjct: 548 DFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLVNTEINDPDG 607
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR ++L P G ++WTDW
Sbjct: 608 IAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGL--MYWTDW 665
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
GENP+IE +DG R +++T + WPNGL LD+ ++Y+ D+K D
Sbjct: 666 GENPKIECANLDGQERHILVNTSLGWPNGLALDLQEGKLYWGDAKTD------------- 712
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
KI ++DG+ L+ +L L +Y
Sbjct: 713 ---------------------KIEVIDVDGTKRRTLLEDKLPHIFGFTLLGDFIY----- 746
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ ++R II
Sbjct: 747 ------WTDW-QRRSIERVHKVKASRDVII 769
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 87/147 (59%), Gaps = 17/147 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 305 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 353
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 354 ----WTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 409
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGDN 422
N DG+ RQ+V+ L F L GD
Sbjct: 410 NLDGSFRQKVVEGSLTHPFALTLSGDT 436
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 120/242 (49%), Gaps = 20/242 (8%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTC---QDMNECEQPGYCSQMCTNTKG 89
C + G CS+ C TP C CP G L +D TC + ++ +T
Sbjct: 792 CADRNGGCSHLCFFTPRATKCGCPIGLELLSDMKTCIVPEAFLVFTSRAAIHRISLDTNN 851
Query: 90 SYIC----SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVV 145
+ + E L++D ++++ + + +I A + +H ++
Sbjct: 852 NDVAIPLTGVKEASALDFD------VSNNHIYWTDVSLKTISRAFMNGSSVEH----VIE 901
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
GLD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR + LDP+ G
Sbjct: 902 FGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTKG- 960
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+++WT+WG PRI R MDG+N T++ K+ N LT+D A +R+Y+ D + I+
Sbjct: 961 -YIYWTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTNMIESS 1018
Query: 266 SL 267
++
Sbjct: 1019 NM 1020
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI +D +N I T + + L D++ +Y+ D L F++ S+E I+
Sbjct: 842 IHRISLDTNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIE 901
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 902 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 957
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 958 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 1005
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ N G+++V++ D
Sbjct: 1006 YWTDLDTNMIESSNM--LGQERVVIAD 1030
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 140/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C + CSC Y L+ + C F
Sbjct: 1078 DILVFHSSRQDGLNDCMHNNGQCGQLCLAVPSGHRCSCASHYTLDPSSRNCSP---PTTF 1134
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D R+ D+++ GL V+ + YD + IYW+D R N I
Sbjct: 1135 LLFSQKCAISRMIPD------DQRSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQN-I 1187
Query: 174 EVCDENGTNRIVLAKDNITQ-----PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT VL + +Q P + +D +R LFWT N I ++G
Sbjct: 1188 KRAKDDGTQPFVLTSPSQSQNPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLNGDA 1244
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1245 MGMVLRGDRDKPRAIVVNAERGYLYFTNMQ---------------------------DRA 1277
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A +DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1278 A-----KIERAALDGTEREVLFTTGLIRPVALVVDNTLGK---------LFWVD-ADLKR 1322
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT + + +Y+ D + I+
Sbjct: 1323 IESCDLSGANRLTLEDANIVQPVGLT--VLGKHLYWIDRQQQMIE 1365
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 142/357 (39%), Gaps = 62/357 (17%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 363 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 422
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 423 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGDKRKEILSA-LYSPMDIQVLSPE 477
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
R+ Y+ + D C L + + R+ ++ GV L+ +
Sbjct: 478 RQPYYHTRCEEDNGGCSHLCLLSP-------REPFYACACPTGVQLQDNGQTCKAGAEEV 530
Query: 309 LVSGQLYEALALDLENGMLYYSTLKC--------------TRWLFWTDWGENPRIERIGM 354
L+ + + + L+ L+ +++WTD E I R +
Sbjct: 531 LLLARRTDLRRISLDTPDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTD-DEVRAIRRAYL 589
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL---- 410
DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 590 DGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPR 649
Query: 411 --MVEFTNDLM-----GDN---------------------GVP-ALALDLENGMLYY 438
++ LM G+N G P LALDL+ G LY+
Sbjct: 650 AIVLHPVMGLMYWTDWGENPKIECANLDGQERHILVNTSLGWPNGLALDLQEGKLYW 706
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N +L +N A +E D ++++ +GL L
Sbjct: 1246 GMVLRGDRDKPRAIVVNAERGYLYFTNMQD-RAAKIERAALDGTEREVLFTTGLIRPVAL 1304
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + + L+W D
Sbjct: 1305 VVDNTLGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPVGLTV----LGKHLYWID-R 1359
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ + T + ++ G+
Sbjct: 1360 QQQMIERVDKTTGDARTRVQGRVAHLTGI 1388
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 306 ASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTI 362
++I+VSG L +A A+D + G +Y WTD E + + G+ +
Sbjct: 242 STIVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAVQNV 289
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 290 VISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------D 338
Query: 423 GVPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 339 QPRAIALDPAHGYMYWTDWG 358
>gi|358410948|ref|XP_003581884.1| PREDICTED: low-density lipoprotein receptor-related protein 1B,
partial [Bos taurus]
Length = 1655
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 154/318 (48%), Gaps = 65/318 (20%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEG-------PGCDLAECKHKFGLCSNTCHPTPLGALCT 54
A++C++L+++C+G DC +G DEG P C C+HK + N+ +C
Sbjct: 121 ANKCIHLSQLCNGVLDCLDGYDEGVHCRELLPNCQQLNCQHKCAMVRNS-------TMCY 173
Query: 55 CPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH- 113
C G + D +C+D +EC G CSQ C NT GSY CSC EGY+++ DN +CKA N
Sbjct: 174 CEDGFEIKEDGRSCKDQDECAIYGTCSQSCVNTYGSYACSCVEGYIMQPDNRSCKAKNEP 233
Query: 114 --SAAFLIISNRHSI-------------------------------LVADLEEKGKDHRA 140
L+I+N +I ++ +E + +R
Sbjct: 234 TDKPPLLLIANSETIEIFYLNGSKMATLSSVNGNEIHTLDFIYNEDMICWIESRESSNRL 293
Query: 141 QDI---------------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
+ I ++ V+ +A DW+ ++Y++D +RI VCD NG+ +
Sbjct: 294 KCIQITKTGRLTDEWTISILQSFHNVQQMAIDWLTRNLYFVDHVSDRIFVCDYNGSVCVT 353
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
L + P+ + +DP G LF+TD+G ++ER MDG NR+ II +K P L L
Sbjct: 354 LIDLELHNPKAIAVDPIAGK--LFFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALAL 411
Query: 246 DIATRRVYFADSKLDFID 263
D+ + VY+ D LD+++
Sbjct: 412 DLVNKWVYWVDLYLDYVE 429
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 164/403 (40%), Gaps = 102/403 (25%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+G+ DCP+G+DEG CD EC G CSN C P G +C+CP G L
Sbjct: 1258 CLQPEKLCNGRWDCPDGSDEGDLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLGR 1315
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC EG+ L+ D +C +++ AF+I S R
Sbjct: 1316 DNKTCEIVDYCSNHLKCSQVCEQHKQTVKCSCYEGWKLDVDGQSCSSVDPFEAFIIFSIR 1375
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1376 HEIRKIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAIE 1435
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 1436 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDP 1495
Query: 202 SPGTRWL---------------------------------FWTDWGENPRIERIGMDGSN 228
G+ + +WTDW N + G N
Sbjct: 1496 RFGSDAIYSALYDGTSMIEIIRGHEYLSHPFAVSLYGSDVYWTDWRTNTLSKANKWTGQN 1555
Query: 229 RSTIIST-------KIYWPNGLTLDIATRRVYFADSKLDFIDCKS-------------LE 268
S I T +IY P+ ++ +Y S++ +D + ++
Sbjct: 1556 VSVIQKTSAQPFDLQIYHPSRQPQEMKKFLLYARRSEIRGVDIDNPYFNFITAFTVPDID 1615
Query: 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
T +++ +LYW D I +A ++G+ ++S
Sbjct: 1616 DVTVIDFDASEERLYWTDIKTQ----TIKRAFINGTGLETVIS 1654
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 107/240 (44%), Gaps = 55/240 (22%)
Query: 77 PGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA-DLEE 133
PG CS +C +++ + C C G+ L D +CK + R I+ DL
Sbjct: 517 PGGCSHICLLSSSYKTRTCRCRTGFNLGSDGRSCKRPKNELFLFYGKGRPGIVRGMDLNT 576
Query: 134 KGKDH-----------RAQD------------------------------IVVSGLDLVE 152
K D RA D I+ LD VE
Sbjct: 577 KIADEYMIPIENLVNPRALDFHAETSYIYFADTTSFLIGRQKIDGTERETILKDDLDNVE 636
Query: 153 GLAYDWIGGHIYWL-DSRLNRIEVC--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
G+A DWIG ++YW D I V ++ +R L + ++ PRG+++DP G W++
Sbjct: 637 GIAVDWIGNNLYWTNDGHRKTINVARLEKASQSRKTLLEGEMSHPRGIVVDPVSG--WMY 694
Query: 210 WTDWGENP------RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
WTDW E+ RIE+ MDG NR +++K+ WPNGLTLD T +Y+ D+ D I+
Sbjct: 695 WTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTHTLYWCDAYYDHIE 754
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 68/131 (51%), Gaps = 17/131 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCT 335
+ R LY++D V +I + +GS L+ +L+ +A+A+D G L
Sbjct: 327 LTRNLYFVDH----VSDRIFVCDYNGSVCVTLIDLELHNPKAIAVDPIAGKL-------- 374
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
F+TD+G ++ER MDG NR+ II +K P L LD+ + VY+ D LD+++
Sbjct: 375 ---FFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNKWVYWVDLYLDYVEVV 431
Query: 396 NYDGTGRQQVI 406
+Y G R +I
Sbjct: 432 DYQGKNRHTII 442
>gi|15030228|gb|AAH11374.1| Low density lipoprotein receptor-related protein 5 [Mus musculus]
Length = 1614
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 135/275 (49%), Gaps = 55/275 (20%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ+IV+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + L
Sbjct: 98 AQNIVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIAL 157
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 158 DPAHG--YMYWTDWGEAPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKL 215
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
FI +AN+DGS +V G L A
Sbjct: 216 SFIH----------------------------------RANLDGSFRQKVVEGSLTHPFA 241
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L L LY WTDW G R I+S +Y P +DI
Sbjct: 242 LTLSGDTLY-----------WTDWQTRSIHACNKWTGEQRKEILSA-LYSP----MDI-- 283
Query: 380 RRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
+V + + F C D G + L+ F
Sbjct: 284 -QVLSQERQPPFHTPCEEDNGGCSHLCLLSPREPF 317
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 150/338 (44%), Gaps = 61/338 (18%)
Query: 33 CKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C+ G CS+ C +P C CP G L ++ TC+ E+ ++ + S
Sbjct: 298 CEEDNGGCSHLCLLSPREPFYSCACPTGVQLQDNGKTCK--TGAEEVLLLARRTDLRRIS 355
Query: 91 YICSCNEGYVLEY-DNHTCKAINHSA----AFLIISNRHSILVADLEEKGKDHRAQDIVV 145
VL+ D AI++ + +I A L+ G AQ +V
Sbjct: 356 LDTPDFTDIVLQVGDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSG----AQTLVN 411
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+ ++ +G+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR ++L P G
Sbjct: 412 TEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGL 471
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
++WTDWGENP+IE +DG +R +++T + WPNGL LD+ ++Y+ D+K D
Sbjct: 472 --MYWTDWGENPKIECANLDGRDRHVLVNTSLGWPNGLALDLQEGKLYWGDAKTD----- 524
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
KI N+DG+ L+ +L L
Sbjct: 525 -----------------------------KIEVINIDGTKRKTLLEDKLPHIFGFTLLGD 555
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+Y WTDW + IER+ ++R II
Sbjct: 556 FIY-----------WTDW-QRRSIERVHKVKASRDVII 581
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 117 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 165
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 166 ----WTDWGEAPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 221
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 222 NLDGSFRQKVVEGSLTHPFALTLSGD 247
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 122/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL +I + DP G +++WTD E I R +DGS
Sbjct: 351 LRRISLDTPDFTD-IVLQVGDIRHAIAIDYDPLEG--YVYWTD-DEVRAIRRAYLDGSGA 406
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
T+++T+I P+G+ +D + R LYW D G
Sbjct: 407 QTLVNTEINDPDGIAVDW------------------------------VARNLYWTDTGT 436
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G++ ILVS L E A+ L M ++WTDWGENP+I
Sbjct: 437 D----RIEVTRLNGTSRKILVSEDLDEPRAIVLHPVM---------GLMYWTDWGENPKI 483
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
E +DG +R +++T + WPNGL LD+ ++Y+ D+K D I+ N DGT R+ ++
Sbjct: 484 ECANLDGRDRHVLVNTSLGWPNGLALDLQEGKLYWGDAKTDKIEVINIDGTKRKTLLEDK 543
Query: 410 LMVEFTNDLMGD 421
L F L+GD
Sbjct: 544 LPHIFGFTLLGD 555
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 105/230 (45%), Gaps = 46/230 (20%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C T + C C G L D TC AFL+ ++R +I LE D
Sbjct: 609 GGCSHLCFFTPRATKCGCPIGLELLSDMKTCII---PEAFLVFTSRATIHRISLETNNND 665
Query: 138 ----------------------------------------HRAQDIVVSGLDLVEGLAYD 157
+ ++ GLD EG+A D
Sbjct: 666 VAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIEFGLDYPEGMAVD 725
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP 217
W+G ++YW D+ NRIEV +G R VL ++ PR + LDP+ G +++WT+WG P
Sbjct: 726 WMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTKG--YIYWTEWGGKP 783
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
RI R MDG+N T++ K+ N LT+D A +R+Y+ D + I+ ++
Sbjct: 784 RIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTNMIESSNM 832
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 141/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C + F
Sbjct: 890 DILVFHSSRQDGLNDCVHSNGQCGQLCLAIPGGHRCGCASHYTLDPSSRNCSP---PSTF 946
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+V+ GL V+ + YD + IYW+D R N I
Sbjct: 947 LLFSQKFAISRMIPD------DQLSPDLVLPLHGLRNVKAINYDPLDKFIYWVDGRQN-I 999
Query: 174 EVCDENGTNRIVLAKDNIT-----QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT +L + + QP + +D +R LFWT N I +DG
Sbjct: 1000 KRAKDDGTQPSMLTSPSQSLSPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLDGDA 1056
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1057 MGVVLRGDRDKPRAIAVNAERGYMYFTNMQ---------------------------DHA 1089
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A++DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1090 A-----KIERASLDGTEREVLFTTGLIRPVALVVDNALGK---------LFWVD-ADLKR 1134
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT + R +Y+ D + I+
Sbjct: 1135 IESCDLSGANRLTLEDANIVQPVGLT--VLGRHLYWIDRQQQMIE 1177
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 99/212 (46%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E I+
Sbjct: 654 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIE 713
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 714 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 769
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 770 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 817
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R VI DL F
Sbjct: 818 YWTDLDTNMIESSNMLGQER-MVIADDLPYPF 848
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 149/366 (40%), Gaps = 80/366 (21%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 175 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 234
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 235 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKWTGEQRKEILSA-LYSPMDIQVLSQE 289
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI-GKANMDGSNAS 307
R+ F + D C L + + R+ ++ GV L+ GK G+
Sbjct: 290 RQPPFHTPCEEDNGGCSHLCLLSP-------REPFYSCACPTGVQLQDNGKTCKTGAEEV 342
Query: 308 ILVS----------------------GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
+L++ G + A+A+D Y L+ +++WTD E
Sbjct: 343 LLLARRTDLRRISLDTPDFTDIVLQVGDIRHAIAID-------YDPLE--GYVYWTD-DE 392
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
I R +DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ +
Sbjct: 393 VRAIRRAYLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKIL 452
Query: 406 ILIDL------MVEFTNDLM-----GDN---------------------GVP-ALALDLE 432
+ DL ++ LM G+N G P LALDL+
Sbjct: 453 VSEDLDEPRAIVLHPVMGLMYWTDWGENPKIECANLDGRDRHVLVNTSLGWPNGLALDLQ 512
Query: 433 NGMLYY 438
G LY+
Sbjct: 513 EGKLYW 518
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 34/216 (15%)
Query: 208 LFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC-- 264
++WTD E + + G+ I+ + + P+GL D +++Y+ DS+ + I+
Sbjct: 76 VYWTDVSEEAIKQTYLNQTGAAAQNIVISGLVSPDGLACDWVGKKLYWTDSETNRIEVAN 135
Query: 265 -----------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+ L+ + +YW D G +I +A MDGS I+V
Sbjct: 136 LNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGEAP---RIERAGMDGSTRKIIVDSD 192
Query: 314 LY--EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
+Y L +DLE LY++ K + I R +DGS R ++ + P
Sbjct: 193 IYWPNGLTIDLEEQKLYWADAKLS------------FIHRANLDGSFRQKVVEGSLTHPF 240
Query: 372 GLTLDIATRRVYFADSKLDFIDFCN-YDGTGRQQVI 406
LTL T +Y+ D + I CN + G R++++
Sbjct: 241 ALTLSGDT--LYWTDWQTRSIHACNKWTGEQRKEIL 274
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N ++ +N A +E D ++++ +GL L
Sbjct: 1058 GVVLRGDRDKPRAIAVNAERGYMYFTNMQD-HAAKIERASLDGTEREVLFTTGLIRPVAL 1116
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + R L+W D
Sbjct: 1117 VVDNALGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPVGLTV----LGRHLYWID-R 1171
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T + ++ G+
Sbjct: 1172 QQQMIERVEKTTGDKRTRVQGRVTHLTGI 1200
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 25/139 (17%)
Query: 307 SILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTII 363
S +V+ L +A A+D + G +Y WTD E + + G+ I+
Sbjct: 54 STIVASGLEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAAQNIV 102
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNG 423
+ + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 103 ISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------DQ 151
Query: 424 VPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 152 PRAIALDPAHGYMYWTDWG 170
>gi|402888264|ref|XP_003907490.1| PREDICTED: low-density lipoprotein receptor-related protein 1B-like,
partial [Papio anubis]
Length = 1393
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 143/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +C+ K DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 974 RCIPSGGLCNNKDDCGDGSDE-RNCHINECLSKKVSGCSQDCQDLPISYKCKCWPGFQLK 1032
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C +GY ++ DN + CK+++ FLI++
Sbjct: 1033 DDGKTCVDIDECSSGFPCSQQCINTYGTYKCLCTDGYEIQPDNPNGCKSLSDEEPFLILA 1092
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
+ H I L ++G D+R + I
Sbjct: 1093 DHHEIRKISTDGSNYTLLKQGLNNVIAIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDI 1152
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG +L + PR + LDP
Sbjct: 1153 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTILVSKRLKFPRDLSLDPR 1212
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +L+W D E P I R+GMDG+N+S +I TKI P LT+D R+Y+AD
Sbjct: 1213 AG--YLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLYWAD 1264
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 15/208 (7%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+DI+ +GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + +
Sbjct: 17 EDIITNGLGRVEGIAIDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIAVH 76
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G LFWT+WG+ P I + +DGS + ++S I WPNG+++D ++Y+ D++ D
Sbjct: 77 PEKGL--LFWTEWGQMPCIGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTD 134
Query: 261 FIDCKSLEI---------KTNVNYSTIF---RKLYWIDEGGNGVPLKIGKANMDGSNASI 308
I+ LE +NV+ ++ +YW D ++ G N D +
Sbjct: 135 KIERIDLEAGGHREVVLSGSNVDMFSVAVFGAYIYWSDRAHANGSVRRGHKN-DATETIT 193
Query: 309 LVSGQLYEALALDLENGMLYYSTLKCTR 336
+ +G + + N + T C R
Sbjct: 194 MRTGLGVNLKEVKIFNRVREKGTNVCAR 221
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
I +YW D G N + + A ++GS +++S L + ++A+ E G+L
Sbjct: 35 IAGNIYWTDHGFNLIEV----ARLNGSFRYVIISQGLDQPRSIAVHPEKGLL-------- 82
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
FWT+WG+ P I + +DGS + ++S I WPNG+++D ++Y+ D++ D I+
Sbjct: 83 ---FWTEWGQMPCIGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERI 139
Query: 396 NYDGTGRQQVIL 407
+ + G ++V+L
Sbjct: 140 DLEAGGHREVVL 151
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G N ++ST I PNGLT+D ++YF+D L
Sbjct: 399 ECQNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGK 458
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 459 IERCEYDGSQRHVIV 473
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 94/242 (38%), Gaps = 58/242 (23%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-----NRIEVCDENGTNR---IVLAKDNIT 192
+ ++V + VEGLAY +YW S + ++ +R I +++D+
Sbjct: 333 RQVIVENVGSVEGLAYHRAWDTLYWTSSTTSSITRHTVDQTRPGAFDREAVITMSEDD-- 390
Query: 193 QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
P + LD +FWT+W E +P I R + G N ++ST I PNGLT+D +
Sbjct: 391 HPHVLALDECQNL--MFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEK 448
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+YF+D L KI + DGS ++V
Sbjct: 449 LYFSDGSLG----------------------------------KIERCEYDGSQRHVIVK 474
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
L+L + + ++FW+DWG + G + + S + P
Sbjct: 475 SGPGTFLSLAVYDN-----------YIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPM 523
Query: 372 GL 373
G+
Sbjct: 524 GI 525
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ +V + + GL D+ +Y+ D L +IE C+ +G+ R V+ K G L
Sbjct: 426 AQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGKIERCEYDGSQRHVIVKSG----PGTFL 481
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ ++FW+DWG + G + + S + P G+
Sbjct: 482 SLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGI 525
>gi|354496629|ref|XP_003510428.1| PREDICTED: low-density lipoprotein receptor-related protein 5
[Cricetulus griseus]
Length = 1728
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 134/275 (48%), Gaps = 55/275 (20%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ IV+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + L
Sbjct: 212 AQSIVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIAL 271
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 272 DPAHG--YMYWTDWGEAPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKL 329
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
FI +AN+DGS +V G L A
Sbjct: 330 SFIH----------------------------------RANLDGSFRQKVVEGSLTHPFA 355
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L L LY WTDW G R I+S +Y P +DI
Sbjct: 356 LTLSGDTLY-----------WTDWQTRSIHACNKWTGEKRKEILSA-LYSP----MDI-- 397
Query: 380 RRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
+V + + F C D G + L+ F
Sbjct: 398 -QVLSQERQPPFHTRCEEDNGGCSHLCLLSPREPF 431
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 139/330 (42%), Gaps = 89/330 (26%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN---------- 122
E G CS +C + + Y C+C G L+ + TCKA L
Sbjct: 414 EDNGGCSHLCLLSPREPFYSCACPTGVQLQDNGKTCKAGAEEVLLLARRTDLRRISLDTP 473
Query: 123 ------------RHSILV-----------ADLEEKGKDHR------AQDIVVSGLDLVEG 153
RH+I + D E + AQ +V + ++ +G
Sbjct: 474 DFTDIVLQVGDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLVNTEINDPDG 533
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR ++L P G ++WTDW
Sbjct: 534 IAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGL--MYWTDW 591
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
GENP+IE +DG +R +++T + WPNGL LD+ ++Y+ D+K D
Sbjct: 592 GENPKIECANLDGRDRHVLVNTSLGWPNGLALDLQEGKLYWGDAKTD------------- 638
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
KI N+DG+ L+ +L L +Y
Sbjct: 639 ---------------------KIEVINIDGTKRRTLLEDKLPHIFGFTLLGDFIY----- 672
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ ++R II
Sbjct: 673 ------WTDW-QRRSIERVHKVKASRDVII 695
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 231 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 279
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 280 ----WTDWGEAPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 335
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 336 NLDGSFRQKVVEGSLTHPFALTLSGD 361
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 107/230 (46%), Gaps = 46/230 (20%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG-- 135
G CS +C T + C C G L D TC AFL+ ++R +I LE
Sbjct: 723 GGCSHLCFFTPHATKCGCPIGLELLSDMKTCII---PEAFLVFTSRATIHRISLETNNND 779
Query: 136 --------KDHRAQDIVVS------------------------------GLDLVEGLAYD 157
K+ A D VS GLD EG+A D
Sbjct: 780 VAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIEFGLDYPEGMAVD 839
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP 217
W+G ++YW D+ NRIEV +G R VL ++ PR + LDP+ G +++WT+WG P
Sbjct: 840 WMGKNLYWADTGTNRIEVARLDGQFRQVLVWKDLDNPRSLALDPTKG--YIYWTEWGGKP 897
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
RI R MDG+N T++ K+ N LT+D A +R+Y+ D + I+ ++
Sbjct: 898 RIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTNMIESSNM 946
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 140/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C + F
Sbjct: 1004 DILVFHSSRQDGLNDCVHSNGQCGQLCLAIPGGHRCGCASHYTLDPSSRNCSP---PSTF 1060
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+V+ GL V+ + YD + IYW+D R N I
Sbjct: 1061 LLFSQKFAISRMIPD------DQLSPDLVLPLHGLRNVKAINYDPLDKFIYWVDGRQN-I 1113
Query: 174 EVCDENGTNRIVLAKDNIT-----QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT L + + QP + +D +R LFWT N I +DG
Sbjct: 1114 KRAKDDGTQPSTLTSPSQSLSPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLDGDA 1170
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1171 MGVVLRGDRDKPRAIAVNAERGYMYFTNMQ---------------------------DHA 1203
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A++DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1204 A-----KIERASLDGTEREVLFTTGLIRPVALVVDNTLGK---------LFWVD-ADLKR 1248
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT + R +Y+ D + I+
Sbjct: 1249 IESCDLSGANRLTLEDANIVQPVGLT--VLGRHLYWIDRQQQMIE 1291
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 99/212 (46%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E I+
Sbjct: 768 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIE 827
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 828 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWKDLDNPRSLALDP 883
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 884 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 931
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R VI DL F
Sbjct: 932 YWTDLDTNMIESSNMLGQER-MVIADDLPYPF 962
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 208 LFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC-- 264
++WTD E + + G+ +I+ + + P+GL D +++Y+ DS+ + I+
Sbjct: 190 VYWTDVSEEAIKQTYLNQTGAAAQSIVISGLVSPDGLACDWVGKKLYWTDSETNRIEVAN 249
Query: 265 -----------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+ L+ + +YW D G +I +A MDGS I+V
Sbjct: 250 LNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGEAP---RIERAGMDGSTRKIIVDSD 306
Query: 314 LY--EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
+Y L +DLE LY++ K + I R +DGS R ++ + P
Sbjct: 307 IYWPNGLTIDLEEQKLYWADAKLS------------FIHRANLDGSFRQKVVEGSLTHPF 354
Query: 372 GLTLDIATRRVYFADSKLDFIDFCN-YDGTGRQQVI 406
LTL T +Y+ D + I CN + G R++++
Sbjct: 355 ALTLSGDT--LYWTDWQTRSIHACNKWTGEKRKEIL 388
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 149/366 (40%), Gaps = 80/366 (21%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 289 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 348
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 349 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKWTGEKRKEILSA-LYSPMDIQVLSQE 403
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI-GKANMDGSNAS 307
R+ F + D C L + + R+ ++ GV L+ GK G+
Sbjct: 404 RQPPFHTRCEEDNGGCSHLCLLSP-------REPFYSCACPTGVQLQDNGKTCKAGAEEV 456
Query: 308 ILVS----------------------GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
+L++ G + A+A+D Y L+ +++WTD E
Sbjct: 457 LLLARRTDLRRISLDTPDFTDIVLQVGDIRHAIAID-------YDPLEG--YVYWTD-DE 506
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
I R +DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ +
Sbjct: 507 VRAIRRAYLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKIL 566
Query: 406 ILIDL------MVEFTNDLM-----GDN---------------------GVP-ALALDLE 432
+ DL ++ LM G+N G P LALDL+
Sbjct: 567 VSEDLDEPRAIVLHPVMGLMYWTDWGENPKIECANLDGRDRHVLVNTSLGWPNGLALDLQ 626
Query: 433 NGMLYY 438
G LY+
Sbjct: 627 EGKLYW 632
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N ++ +N A +E D ++++ +GL L
Sbjct: 1172 GVVLRGDRDKPRAIAVNAERGYMYFTNMQD-HAAKIERASLDGTEREVLFTTGLIRPVAL 1230
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + R L+W D
Sbjct: 1231 VVDNTLGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPVGLTV----LGRHLYWID-R 1285
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T + ++ G+
Sbjct: 1286 QQQMIERVEKTTGDKRTRVQGRVTHLTGI 1314
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 25/139 (17%)
Query: 307 SILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTII 363
S +V+ L +A A+D + G +Y WTD E + + G+ +I+
Sbjct: 168 STIVASGLEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAAQSIV 216
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNG 423
+ + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 217 ISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------DQ 265
Query: 424 VPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 266 PRAIALDPAHGYMYWTDWG 284
>gi|324500824|gb|ADY40376.1| Low-density lipoprotein receptor-related protein 1B, partial [Ascaris
suum]
Length = 1566
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 142/308 (46%), Gaps = 55/308 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ VCD DCP G DEG CD C LC C+ P G +C C G +L+ D
Sbjct: 1228 CLPPEAVCDHIVDCPMGDDEGFLCDERMCSES--LCEQLCYERPSGYICACREGFMLAED 1285
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
+ C N C G C Q+C + C C G+ L D TC++ + + A +I SNRH
Sbjct: 1286 NRRCIKQNPCTF-GACGQLCWAQGSTRYCHCEPGFELLDDKFTCESTDPAPAKIIYSNRH 1344
Query: 125 SI----------------------------------------LVADLEEKGKDHRA---- 140
I + AD+ +GK
Sbjct: 1345 EIRLVTIDSETSSVPLVTHLRNSIAVNYYYERTGEIWLFWTDIAADIIYRGKLQGQLLTD 1404
Query: 141 -QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+ IV G+ EGLA DW+ ++YW+DS L++IEV + NGT R + + ++ R + L
Sbjct: 1405 IEPIVSYGIWTAEGLAVDWLAKNVYWVDSWLDQIEVANFNGTVRTTVLRGDMKNLRALAL 1464
Query: 200 DPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY----WPNGLTLDIATRRVYF 254
DPS G +FWTDW E NPRIER M G +R + WPNGLT D + R+Y+
Sbjct: 1465 DPSKGV--MFWTDWEEANPRIERATMAGQDRKVLFRVLEIVNGGWPNGLTCDFSVERLYW 1522
Query: 255 ADSKLDFI 262
D+K D I
Sbjct: 1523 IDAKSDSI 1530
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 152/350 (43%), Gaps = 92/350 (26%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGC------DLAECKHKFGLCSNTCHPTPLGALCTCPP 57
+CV+L+K CDG DC +G+DE C D CK+ + + G C CPP
Sbjct: 97 QCVHLSKFCDGYRDCADGSDEHARCGVPPSPDDVTCKYGGAMTFDK------GMQCYCPP 150
Query: 58 GEILSNDSVTCQDMNECEQPGY-----CSQMCTNTKGS------YICSCNEGYVLEYDNH 106
G+ C+D +EC++ + C+Q+C N Y C+C + E N
Sbjct: 151 GQ--EPRGSECEDEDECKRVEFGGVPVCAQICVNLIAKRAGDQKYRCACAPEF--ELVNE 206
Query: 107 T-CKAIN------HSAAFL-----IISNR---------HSILVADLEEKGKDHRAQDI-- 143
T C+A+ H++ FL I+ + SI V +L+ DHR + +
Sbjct: 207 TWCRALKASTPSTHASVFLYGQLRIVHKKLDDLKSRDLDSISVPELQALAVDHRRRRLCW 266
Query: 144 ----VVSGLDLV---------------------------EGLAYDWIGGHIYWLDSRLNR 172
V+ LD V + + +DWIG + Y +D+ +
Sbjct: 267 VAARAVNTLDQVSCVVINDNGQFIMPIRNIDPVFTVEGVKAMRFDWIGNNWYMVDNLYSN 326
Query: 173 IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG-ENPRIERIGMDGSNRST 231
+ VC N + L I +P + +D + G + F TD+G E+ + R+ +DGS +
Sbjct: 327 VFVCSSNFERCLTLCGGKIEKPSAIAVDSTAG--YAFITDFGTESGGLWRMRLDGSELVS 384
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRK 281
++ ++I P G+ D +R VY+AD L+++ + ++Y F+K
Sbjct: 385 LVDSRIIHPLGVVADPFSRTVYWADEYLEYL--------SAIDYDGRFKK 426
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 112/258 (43%), Gaps = 66/258 (25%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI-VLAKDNITQPRGMML 199
+ +V +G+ EGL DW G++Y D I V + + N + VL K N++ PRGM +
Sbjct: 645 ETVVDNGVSDCEGLVIDWTSGNLYLSDRGHRHIAVVNVDRPNLMKVLVKGNVSNPRGMAV 704
Query: 200 DPSPGTRWLFWTDWGENP---------RIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
P +LF+ DW + P +IER +DGS R +IS I+WPNGL +D
Sbjct: 705 HPMKA--YLFFADWMDAPSTRGLGAGAKIERTKLDGSERKVLISKDIHWPNGLAVDHDNE 762
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
+Y+ D+ D +I + + +G + +++
Sbjct: 763 WLYWCDAYYD----------------------------------RIERIHFNGIDRQVVI 788
Query: 311 SGQLYEALALDLENGMLYYSTLKCTRWLFWTDW----------GENPRIERIGMDGSNRS 360
G AL+ G+ Y + ++FW+++ GEN I R + S++S
Sbjct: 789 DGD-----ALNHPYGLAVYGS-----FIFWSEFLDSEIRRIRVGENGLIGRSRIVYSDKS 838
Query: 361 TIISTKIYWPNGLTLDIA 378
++ ++ PN T A
Sbjct: 839 SLFELHVFDPNSHTQTTA 856
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 90/209 (43%), Gaps = 41/209 (19%)
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL----DFIDCKSLEIK-TN 272
R+ I +D N++ +Y+ + I R+VY D + DC+ L I T+
Sbjct: 611 RLTAIAVDARNQT------VYFSDARNFTIYKRQVYATDIETVVDNGVSDCEGLVIDWTS 664
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN-ASILVSGQLYEALALDLENGMLYYST 331
N LY D G I N+D N +LV G + + + Y
Sbjct: 665 GN-------LYLSDRGHR----HIAVVNVDRPNLMKVLVKGNVSNPRGMAVHPMKAY--- 710
Query: 332 LKCTRWLFWTDWGENP---------RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
LF+ DW + P +IER +DGS R +IS I+WPNGL +D +
Sbjct: 711 ------LFFADWMDAPSTRGLGAGAKIERTKLDGSERKVLISKDIHWPNGLAVDHDNEWL 764
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLM 411
Y+ D+ D I+ +++G RQ VI D +
Sbjct: 765 YWCDAYYDRIERIHFNGIDRQVVIDGDAL 793
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 29/164 (17%)
Query: 287 EGGNGVPLKIGKAN--------MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWL 338
E + P KI +N +D +S+ + L ++A++ YY WL
Sbjct: 1329 ESTDPAPAKIIYSNRHEIRLVTIDSETSSVPLVTHLRNSIAVN------YYYERTGEIWL 1382
Query: 339 FWTDWGENPRIERIGMDG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
FWTD + I R + G ++ I+S I+ GL +D + VY+ DS LD I+
Sbjct: 1383 FWTDIAADI-IYRGKLQGQLLTDIEPIVSYGIWTAEGLAVDWLAKNVYWVDSWLDQIEVA 1441
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYS 439
N++GT R V+ D+ + ALALD G+++++
Sbjct: 1442 NFNGTVRTTVLRGDM-----------KNLRALALDPSKGVMFWT 1474
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 337 WLFWTDWG-ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ F TD+G E+ + R+ +DGS +++ ++I P G+ D +R VY+AD L+++
Sbjct: 359 YAFITDFGTESGGLWRMRLDGSELVSLVDSRIIHPLGVVADPFSRTVYWADEYLEYLSAI 418
Query: 396 NYDGTGRQQVILIDLMVE 413
+YDG +++ + +V+
Sbjct: 419 DYDGRFKKREVAAGTLVK 436
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 129 ADLEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVL 186
A +E D + +++S + GLA D +YW D+ +RIE NG +R +V+
Sbjct: 729 AKIERTKLDGSERKVLISKDIHWPNGLAVDHDNEWLYWCDAYYDRIERIHFNGIDRQVVI 788
Query: 187 AKDNITQPRGMMLDPSPGTRWLFWTDW----------GENPRIERIGMDGSNRSTIISTK 236
D + P G+ + S ++FW+++ GEN I R + S++S++
Sbjct: 789 DGDALNHPYGLAVYGS----FIFWSEFLDSEIRRIRVGENGLIGRSRIVYSDKSSLFELH 844
Query: 237 IYWPNGLTLDIA 248
++ PN T A
Sbjct: 845 VFDPNSHTQTTA 856
>gi|253314536|ref|NP_032539.2| low-density lipoprotein receptor-related protein 5 precursor [Mus
musculus]
gi|341941014|sp|Q91VN0.3|LRP5_MOUSE RecName: Full=Low-density lipoprotein receptor-related protein 5;
Short=LRP-5; AltName: Full=Low-density lipoprotein
receptor-related protein 7; Short=LRP-7; AltName:
Full=Lr3; Flags: Precursor
Length = 1614
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 135/275 (49%), Gaps = 55/275 (20%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ+IV+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + L
Sbjct: 98 AQNIVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIAL 157
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 158 DPAHG--YMYWTDWGEAPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKL 215
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
FI +AN+DGS +V G L A
Sbjct: 216 SFIH----------------------------------RANLDGSFRQKVVEGSLTHPFA 241
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L L LY WTDW G R I+S +Y P +DI
Sbjct: 242 LTLSGDTLY-----------WTDWQTRSIHACNKWTGEQRKEILSA-LYSP----MDI-- 283
Query: 380 RRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
+V + + F C D G + L+ F
Sbjct: 284 -QVLSQERQPPFHTPCEEDNGGCSHLCLLSPREPF 317
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 150/338 (44%), Gaps = 61/338 (18%)
Query: 33 CKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C+ G CS+ C +P C CP G L ++ TC+ E+ ++ + S
Sbjct: 298 CEEDNGGCSHLCLLSPREPFYSCACPTGVQLQDNGKTCK--TGAEEVLLLARRTDLRRIS 355
Query: 91 YICSCNEGYVLEY-DNHTCKAINHSA----AFLIISNRHSILVADLEEKGKDHRAQDIVV 145
VL+ D AI++ + +I A L+ G AQ +V
Sbjct: 356 LDTPDFTDIVLQVGDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSG----AQTLVN 411
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+ ++ +G+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR ++L P G
Sbjct: 412 TEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGL 471
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
++WTDWGENP+IE +DG +R +++T + WPNGL LD+ ++Y+ D+K D
Sbjct: 472 --MYWTDWGENPKIECANLDGRDRHVLVNTSLGWPNGLALDLQEGKLYWGDAKTD----- 524
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
KI N+DG+ L+ +L L
Sbjct: 525 -----------------------------KIEVINIDGTKRKTLLEDKLPHIFGFTLLGD 555
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+Y WTDW + IER+ ++R II
Sbjct: 556 FIY-----------WTDW-QRRSIERVHKVKASRDVII 581
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 117 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 165
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 166 ----WTDWGEAPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 221
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 222 NLDGSFRQKVVEGSLTHPFALTLSGD 247
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 122/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL +I + DP G +++WTD E I R +DGS
Sbjct: 351 LRRISLDTPDFTD-IVLQVGDIRHAIAIDYDPLEG--YVYWTD-DEVRAIRRAYLDGSGA 406
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
T+++T+I P+G+ +D + R LYW D G
Sbjct: 407 QTLVNTEINDPDGIAVDW------------------------------VARNLYWTDTGT 436
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G++ ILVS L E A+ L M ++WTDWGENP+I
Sbjct: 437 D----RIEVTRLNGTSRKILVSEDLDEPRAIVLHPVM---------GLMYWTDWGENPKI 483
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
E +DG +R +++T + WPNGL LD+ ++Y+ D+K D I+ N DGT R+ ++
Sbjct: 484 ECANLDGRDRHVLVNTSLGWPNGLALDLQEGKLYWGDAKTDKIEVINIDGTKRKTLLEDK 543
Query: 410 LMVEFTNDLMGD 421
L F L+GD
Sbjct: 544 LPHIFGFTLLGD 555
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 105/230 (45%), Gaps = 46/230 (20%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C T + C C G L D TC AFL+ ++R +I LE D
Sbjct: 609 GGCSHLCFFTPRATKCGCPIGLELLSDMKTCII---PEAFLVFTSRATIHRISLETNNND 665
Query: 138 ----------------------------------------HRAQDIVVSGLDLVEGLAYD 157
+ ++ GLD EG+A D
Sbjct: 666 VAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIEFGLDYPEGMAVD 725
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP 217
W+G ++YW D+ NRIEV +G R VL ++ PR + LDP+ G +++WT+WG P
Sbjct: 726 WMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTKG--YIYWTEWGGKP 783
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
RI R MDG+N T++ K+ N LT+D A +R+Y+ D + I+ ++
Sbjct: 784 RIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTNMIESSNM 832
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 141/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C + F
Sbjct: 890 DILVFHSSRQDGLNDCVHSNGQCGQLCLAIPGGHRCGCASHYTLDPSSRNCSP---PSTF 946
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+V+ GL V+ + YD + IYW+D R N I
Sbjct: 947 LLFSQKFAISRMIPD------DQLSPDLVLPLHGLRNVKAINYDPLDKFIYWVDGRQN-I 999
Query: 174 EVCDENGTNRIVLAKDNIT-----QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT +L + + QP + +D +R LFWT N I +DG
Sbjct: 1000 KRAKDDGTQPSMLTSPSQSLSPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLDGDA 1056
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1057 MGVVLRGDRDKPRAIAVNAERGYMYFTNMQ---------------------------DHA 1089
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A++DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1090 A-----KIERASLDGTEREVLFTTGLIRPVALVVDNALGK---------LFWVD-ADLKR 1134
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT + R +Y+ D + I+
Sbjct: 1135 IESCDLSGANRLTLEDANIVQPVGLT--VLGRHLYWIDRQQQMIE 1177
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 99/212 (46%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E I+
Sbjct: 654 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIE 713
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 714 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 769
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 770 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 817
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R VI DL F
Sbjct: 818 YWTDLDTNMIESSNMLGQER-MVIADDLPYPF 848
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 149/366 (40%), Gaps = 80/366 (21%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 175 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 234
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 235 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKWTGEQRKEILSA-LYSPMDIQVLSQE 289
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI-GKANMDGSNAS 307
R+ F + D C L + + R+ ++ GV L+ GK G+
Sbjct: 290 RQPPFHTPCEEDNGGCSHLCLLSP-------REPFYSCACPTGVQLQDNGKTCKTGAEEV 342
Query: 308 ILVS----------------------GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
+L++ G + A+A+D Y L+ +++WTD E
Sbjct: 343 LLLARRTDLRRISLDTPDFTDIVLQVGDIRHAIAID-------YDPLE--GYVYWTD-DE 392
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
I R +DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ +
Sbjct: 393 VRAIRRAYLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKIL 452
Query: 406 ILIDL------MVEFTNDLM-----GDN---------------------GVP-ALALDLE 432
+ DL ++ LM G+N G P LALDL+
Sbjct: 453 VSEDLDEPRAIVLHPVMGLMYWTDWGENPKIECANLDGRDRHVLVNTSLGWPNGLALDLQ 512
Query: 433 NGMLYY 438
G LY+
Sbjct: 513 EGKLYW 518
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 34/216 (15%)
Query: 208 LFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC-- 264
++WTD E + + G+ I+ + + P+GL D +++Y+ DS+ + I+
Sbjct: 76 VYWTDVSEEAIKQTYLNQTGAAAQNIVISGLVSPDGLACDWVGKKLYWTDSETNRIEVAN 135
Query: 265 -----------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+ L+ + +YW D G +I +A MDGS I+V
Sbjct: 136 LNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGEAP---RIERAGMDGSTRKIIVDSD 192
Query: 314 LY--EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
+Y L +DLE LY++ K + I R +DGS R ++ + P
Sbjct: 193 IYWPNGLTIDLEEQKLYWADAKLS------------FIHRANLDGSFRQKVVEGSLTHPF 240
Query: 372 GLTLDIATRRVYFADSKLDFIDFCN-YDGTGRQQVI 406
LTL T +Y+ D + I CN + G R++++
Sbjct: 241 ALTLSGDT--LYWTDWQTRSIHACNKWTGEQRKEIL 274
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N ++ +N A +E D ++++ +GL L
Sbjct: 1058 GVVLRGDRDKPRAIAVNAERGYMYFTNMQD-HAAKIERASLDGTEREVLFTTGLIRPVAL 1116
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + R L+W D
Sbjct: 1117 VVDNALGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPVGLTV----LGRHLYWID-R 1171
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T + ++ G+
Sbjct: 1172 QQQMIERVEKTTGDKRTRVQGRVTHLTGI 1200
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 25/139 (17%)
Query: 307 SILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTII 363
S +V+ L +A A+D + G +Y WTD E + + G+ I+
Sbjct: 54 STIVASGLEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAAQNIV 102
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNG 423
+ + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 103 ISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------DQ 151
Query: 424 VPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 152 PRAIALDPAHGYMYWTDWG 170
>gi|74151044|dbj|BAE27651.1| unnamed protein product [Mus musculus]
Length = 1614
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 135/275 (49%), Gaps = 55/275 (20%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ+IV+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + L
Sbjct: 98 AQNIVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIAL 157
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 158 DPAHG--YMYWTDWGEAPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKL 215
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
FI +AN+DGS +V G L A
Sbjct: 216 SFIH----------------------------------RANLDGSFRQKVVEGSLTHPFA 241
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L L LY WTDW G R I+S +Y P +DI
Sbjct: 242 LTLSGDTLY-----------WTDWQTRSIHACNKWTGEQRKEILSA-LYSP----MDI-- 283
Query: 380 RRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
+V + + F C D G + L+ F
Sbjct: 284 -QVLSQERQPPFHTPCEEDNGGCSHLCLLSPREPF 317
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 150/338 (44%), Gaps = 61/338 (18%)
Query: 33 CKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C+ G CS+ C +P C CP G L ++ TC+ E+ ++ + S
Sbjct: 298 CEEDNGGCSHLCLLSPREPFYSCACPTGVQLQDNGKTCK--TGAEEVLLLARRTDLRRIS 355
Query: 91 YICSCNEGYVLEY-DNHTCKAINHSA----AFLIISNRHSILVADLEEKGKDHRAQDIVV 145
VL+ D AI++ + +I A L+ G AQ +V
Sbjct: 356 LDTPDFTDIVLQVGDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSG----AQTLVN 411
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+ ++ +G+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR ++L P G
Sbjct: 412 TEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGL 471
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
++WTDWGENP+IE +DG +R +++T + WPNGL LD+ ++Y+ D+K D
Sbjct: 472 --MYWTDWGENPKIECANLDGRDRHVLVNTSLGWPNGLALDLQEGKLYWGDAKTD----- 524
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
KI N+DG+ L+ +L L
Sbjct: 525 -----------------------------KIEVINIDGTKRKTLLEDKLPHIFGFTLLGD 555
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+Y WTDW + IER+ ++R II
Sbjct: 556 FIY-----------WTDW-QRRSIERVHKVKASRDVII 581
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 117 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 165
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 166 ----WTDWGEAPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 221
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 222 NLDGSFRQKVVEGSLTHPFALTLSGD 247
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 122/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL +I + DP G +++WTD E I R +DGS
Sbjct: 351 LRRISLDTPDFTD-IVLQVGDIRHAIAIDYDPLEG--YVYWTD-DEVRAIRRAYLDGSGA 406
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
T+++T+I P+G+ +D + R LYW D G
Sbjct: 407 QTLVNTEINDPDGIAVDW------------------------------VARNLYWTDTGT 436
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G++ ILVS L E A+ L M ++WTDWGENP+I
Sbjct: 437 D----RIEVTRLNGTSRKILVSEDLDEPRAIVLHPVM---------GLMYWTDWGENPKI 483
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
E +DG +R +++T + WPNGL LD+ ++Y+ D+K D I+ N DGT R+ ++
Sbjct: 484 ECANLDGRDRHVLVNTSLGWPNGLALDLQEGKLYWGDAKTDKIEVINIDGTKRKTLLEDK 543
Query: 410 LMVEFTNDLMGD 421
L F L+GD
Sbjct: 544 LPHIFGFTLLGD 555
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 105/230 (45%), Gaps = 46/230 (20%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C T + C C G L D TC AFL+ ++R +I LE D
Sbjct: 609 GGCSHLCFFTPRATKCGCPIGLELLSDMKTCII---PEAFLVFTSRATIHRISLETNNND 665
Query: 138 ----------------------------------------HRAQDIVVSGLDLVEGLAYD 157
+ ++ GLD EG+A D
Sbjct: 666 VAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIEFGLDYPEGMAVD 725
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP 217
W+G ++YW D+ NRIEV +G R VL ++ PR + LDP+ G +++WT+WG P
Sbjct: 726 WMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTKG--YIYWTEWGGKP 783
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
RI R MDG+N T++ K+ N LT+D A +R+Y+ D + I+ ++
Sbjct: 784 RIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTNMIESSNM 832
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 141/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C + F
Sbjct: 890 DILVFHSSRQDGLNDCVHSNGQCGQLCLAIPGGHRCGCASHYTLDPSSRNCSP---PSTF 946
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+V+ GL V+ + YD + IYW+D R N I
Sbjct: 947 LLFSQKFAISRMIPD------DQLSPDLVLPLHGLRNVKAINYDPLDKFIYWVDGRQN-I 999
Query: 174 EVCDENGTNRIVLAKDNIT-----QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT +L + + QP + +D +R LFWT N I +DG
Sbjct: 1000 KRAKDDGTQPSMLTSPSQSLSPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLDGDA 1056
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1057 MGVVLRGDRDKPRAIAVNAERGYMYFTNMQ---------------------------DHA 1089
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A++DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1090 A-----KIERASLDGTEREVLFTTGLIRPVALVVDNALGK---------LFWVD-ADLKR 1134
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT + R +Y+ D + I+
Sbjct: 1135 IESCDLSGANRLTLEDANIVQPVGLT--VLGRHLYWIDRQQQMIE 1177
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 99/212 (46%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E I+
Sbjct: 654 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIE 713
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 714 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 769
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 770 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 817
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R VI DL F
Sbjct: 818 YWTDLDTNMIESSNMLGQER-MVIADDLPYPF 848
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 149/366 (40%), Gaps = 80/366 (21%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 175 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 234
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 235 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKWTGEQRKEILSA-LYSPMDIQVLSQE 289
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI-GKANMDGSNAS 307
R+ F + D C L + + R+ ++ GV L+ GK G+
Sbjct: 290 RQPPFHTPCEEDNGGCSHLCLLSP-------REPFYSCACPTGVQLQDNGKTCKTGAEEV 342
Query: 308 ILVS----------------------GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
+L++ G + A+A+D Y L+ +++WTD E
Sbjct: 343 LLLARRTDLRRISLDTPDFTDIVLQVGDIRHAIAID-------YDPLE--GYVYWTD-DE 392
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
I R +DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ +
Sbjct: 393 VRAIRRAYLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKIL 452
Query: 406 ILIDL------MVEFTNDLM-----GDN---------------------GVP-ALALDLE 432
+ DL ++ LM G+N G P LALDL+
Sbjct: 453 VSEDLDEPRAIVLHPVMGLMYWTDWGENPKIECANLDGRDRHVLVNTSLGWPNGLALDLQ 512
Query: 433 NGMLYY 438
G LY+
Sbjct: 513 EGKLYW 518
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 34/216 (15%)
Query: 208 LFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC-- 264
++WTD E + + G+ I+ + + P+GL D +++Y+ DS+ + I+
Sbjct: 76 VYWTDVSEEAIKQTYLNQTGAAAQNIVISGLVSPDGLACDWVGKKLYWTDSETNRIEVAN 135
Query: 265 -----------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+ L+ + +YW D G +I +A MDGS I+V
Sbjct: 136 LNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGEAP---RIERAGMDGSTRKIIVDSD 192
Query: 314 LY--EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
+Y L +DLE LY++ K + I R +DGS R ++ + P
Sbjct: 193 IYWPNGLTIDLEEQKLYWADAKLS------------FIHRANLDGSFRQKVVEGSLTHPF 240
Query: 372 GLTLDIATRRVYFADSKLDFIDFCN-YDGTGRQQVI 406
LTL T +Y+ D + I CN + G R++++
Sbjct: 241 ALTLSGDT--LYWTDWQTRSIHACNKWTGEQRKEIL 274
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N ++ +N A +E D ++++ +GL L
Sbjct: 1058 GVVLRGDRDKPRAIAVNAERGYMYFTNMQD-HAAKIERASLDGTEREVLFTTGLIRPVAL 1116
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + R L+W D
Sbjct: 1117 VVDNALGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPVGLTV----LGRHLYWID-R 1171
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T + ++ G+
Sbjct: 1172 QQQMIERVEKTTGDKRTRVQGRVTHLTGI 1200
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 25/139 (17%)
Query: 307 SILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTII 363
S +V+ L +A A+D + G +Y WTD E + + G+ I+
Sbjct: 54 STIVASGLEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAAQNIV 102
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNG 423
+ + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 103 ISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------DQ 151
Query: 424 VPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 152 PRAIALDPAHGYMYWTDWG 170
>gi|60360254|dbj|BAD90371.1| mKIAA4142 protein [Mus musculus]
Length = 1639
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 135/275 (49%), Gaps = 55/275 (20%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ+IV+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + L
Sbjct: 123 AQNIVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIAL 182
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 183 DPAHG--YMYWTDWGEAPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKL 240
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
FI +AN+DGS +V G L A
Sbjct: 241 SFIH----------------------------------RANLDGSFRQKVVEGSLTHPFA 266
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L L LY WTDW G R I+S +Y P +DI
Sbjct: 267 LTLSGDTLY-----------WTDWQTRSIHACNKWTGEQRKEILSA-LYSP----MDI-- 308
Query: 380 RRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
+V + + F C D G + L+ F
Sbjct: 309 -QVLSQERQPPFHTPCEEDNGGCSHLCLLSPREPF 342
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 150/338 (44%), Gaps = 61/338 (18%)
Query: 33 CKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C+ G CS+ C +P C CP G L ++ TC+ E+ ++ + S
Sbjct: 323 CEEDNGGCSHLCLLSPREPFYSCACPTGVQLQDNGKTCK--TGAEEVLLLARRTDLRRIS 380
Query: 91 YICSCNEGYVLEY-DNHTCKAINHSA----AFLIISNRHSILVADLEEKGKDHRAQDIVV 145
VL+ D AI++ + +I A L+ G AQ +V
Sbjct: 381 LDTPDFTDIVLQVGDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSG----AQTLVN 436
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+ ++ +G+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR ++L P G
Sbjct: 437 TEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGL 496
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
++WTDWGENP+IE +DG +R +++T + WPNGL LD+ ++Y+ D+K D
Sbjct: 497 --MYWTDWGENPKIECANLDGRDRHVLVNTSLGWPNGLALDLQEGKLYWGDAKTD----- 549
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
KI N+DG+ L+ +L L
Sbjct: 550 -----------------------------KIEVINIDGTKRKTLLEDKLPHIFGFTLLGD 580
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+Y WTDW + IER+ ++R II
Sbjct: 581 FIY-----------WTDW-QRRSIERVHKVKASRDVII 606
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 142 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 190
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 191 ----WTDWGEAPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 246
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 247 NLDGSFRQKVVEGSLTHPFALTLSGD 272
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 122/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL +I + DP G +++WTD E I R +DGS
Sbjct: 376 LRRISLDTPDFTD-IVLQVGDIRHAIAIDYDPLEG--YVYWTD-DEVRAIRRAYLDGSGA 431
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
T+++T+I P+G+ +D + R LYW D G
Sbjct: 432 QTLVNTEINDPDGIAVDW------------------------------VARNLYWTDTGT 461
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G++ ILVS L E A+ L M ++WTDWGENP+I
Sbjct: 462 D----RIEVTRLNGTSRKILVSEDLDEPRAIVLHPVM---------GLMYWTDWGENPKI 508
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
E +DG +R +++T + WPNGL LD+ ++Y+ D+K D I+ N DGT R+ ++
Sbjct: 509 ECANLDGRDRHVLVNTSLGWPNGLALDLQEGKLYWGDAKTDKIEVINIDGTKRKTLLEDK 568
Query: 410 LMVEFTNDLMGD 421
L F L+GD
Sbjct: 569 LPHIFGFTLLGD 580
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 105/230 (45%), Gaps = 46/230 (20%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C T + C C G L D TC AFL+ ++R +I LE D
Sbjct: 634 GGCSHLCFFTPRATKCGCPIGLELLSDMKTCII---PEAFLVFTSRATIHRISLETNNND 690
Query: 138 ----------------------------------------HRAQDIVVSGLDLVEGLAYD 157
+ ++ GLD EG+A D
Sbjct: 691 VAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIEFGLDYPEGMAVD 750
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP 217
W+G ++YW D+ NRIEV +G R VL ++ PR + LDP+ G +++WT+WG P
Sbjct: 751 WMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTKG--YIYWTEWGGKP 808
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
RI R MDG+N T++ K+ N LT+D A +R+Y+ D + I+ ++
Sbjct: 809 RIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTNMIESSNM 857
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 141/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C + F
Sbjct: 915 DILVFHSSRQDGLNDCVHSNGQCGQLCLAIPGGHRCGCASHYTLDPSSRNCSP---PSTF 971
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+V+ GL V+ + YD + IYW+D R N I
Sbjct: 972 LLFSQKFAISRMIPD------DQLSPDLVLPLHGLRNVKAINYDPLDKFIYWVDGRQN-I 1024
Query: 174 EVCDENGTNRIVLAKDNIT-----QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT +L + + QP + +D +R LFWT N I +DG
Sbjct: 1025 KRAKDDGTQPSMLTSPSQSLSPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLDGDA 1081
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1082 MGVVLRGDRDKPRAIAVNAERGYMYFTNMQ---------------------------DHA 1114
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A++DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1115 A-----KIERASLDGTEREVLFTTGLIRPVALVVDNALGK---------LFWVD-ADLKR 1159
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT + R +Y+ D + I+
Sbjct: 1160 IESCDLSGANRLTLEDANIVQPVGLT--VLGRHLYWIDRQQQMIE 1202
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 99/212 (46%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E I+
Sbjct: 679 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIE 738
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 739 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 794
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 795 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 842
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R VI DL F
Sbjct: 843 YWTDLDTNMIESSNMLGQER-MVIADDLPYPF 873
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 149/366 (40%), Gaps = 80/366 (21%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 200 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 259
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 260 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKWTGEQRKEILSA-LYSPMDIQVLSQE 314
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI-GKANMDGSNAS 307
R+ F + D C L + + R+ ++ GV L+ GK G+
Sbjct: 315 RQPPFHTPCEEDNGGCSHLCLLSP-------REPFYSCACPTGVQLQDNGKTCKTGAEEV 367
Query: 308 ILVS----------------------GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
+L++ G + A+A+D Y L+ +++WTD E
Sbjct: 368 LLLARRTDLRRISLDTPDFTDIVLQVGDIRHAIAID-------YDPLE--GYVYWTD-DE 417
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
I R +DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ +
Sbjct: 418 VRAIRRAYLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKIL 477
Query: 406 ILIDL------MVEFTNDLM-----GDN---------------------GVP-ALALDLE 432
+ DL ++ LM G+N G P LALDL+
Sbjct: 478 VSEDLDEPRAIVLHPVMGLMYWTDWGENPKIECANLDGRDRHVLVNTSLGWPNGLALDLQ 537
Query: 433 NGMLYY 438
G LY+
Sbjct: 538 EGKLYW 543
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 34/216 (15%)
Query: 208 LFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC-- 264
++WTD E + + G+ I+ + + P+GL D +++Y+ DS+ + I+
Sbjct: 101 VYWTDVSEEAIKQTYLNQTGAAAQNIVISGLVSPDGLACDWVGKKLYWTDSETNRIEVAN 160
Query: 265 -----------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+ L+ + +YW D G +I +A MDGS I+V
Sbjct: 161 LNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGEAP---RIERAGMDGSTRKIIVDSD 217
Query: 314 LY--EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
+Y L +DLE LY++ K + I R +DGS R ++ + P
Sbjct: 218 IYWPNGLTIDLEEQKLYWADAKLS------------FIHRANLDGSFRQKVVEGSLTHPF 265
Query: 372 GLTLDIATRRVYFADSKLDFIDFCN-YDGTGRQQVI 406
LTL T +Y+ D + I CN + G R++++
Sbjct: 266 ALTLSGDT--LYWTDWQTRSIHACNKWTGEQRKEIL 299
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N ++ +N A +E D ++++ +GL L
Sbjct: 1083 GVVLRGDRDKPRAIAVNAERGYMYFTNMQD-HAAKIERASLDGTEREVLFTTGLIRPVAL 1141
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + R L+W D
Sbjct: 1142 VVDNALGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPVGLTV----LGRHLYWID-R 1196
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T + ++ G+
Sbjct: 1197 QQQMIERVEKTTGDKRTRVQGRVTHLTGI 1225
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 25/139 (17%)
Query: 307 SILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTII 363
S +V+ L +A A+D + G +Y WTD E + + G+ I+
Sbjct: 79 STIVASGLEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAAQNIV 127
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNG 423
+ + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 128 ISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------DQ 176
Query: 424 VPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 177 PRAIALDPAHGYMYWTDWG 195
>gi|3641529|gb|AAC36468.1| low-density lipoprotein receptor-related protein 5 [Mus musculus]
Length = 1614
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 135/275 (49%), Gaps = 55/275 (20%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ+IV+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + L
Sbjct: 98 AQNIVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIAL 157
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 158 DPAHG--YMYWTDWGEAPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKL 215
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
FI +AN+DGS +V G L A
Sbjct: 216 SFIH----------------------------------RANLDGSFRQKVVEGSLTHPFA 241
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L L LY WTDW G R I+S +Y P +DI
Sbjct: 242 LTLSGDTLY-----------WTDWQTRSIHACNKWTGEQRKEILSA-LYSP----MDI-- 283
Query: 380 RRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
+V + + F C D G + L+ F
Sbjct: 284 -QVLSQERQPPFHTPCEEDNGGCSHLCLLSPREPF 317
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 150/338 (44%), Gaps = 61/338 (18%)
Query: 33 CKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C+ G CS+ C +P C CP G L ++ TC+ E+ ++ + S
Sbjct: 298 CEEDNGGCSHLCLLSPREPFYSCACPTGVQLQDNGKTCK--TGAEEVLLLARRTDLRRIS 355
Query: 91 YICSCNEGYVLEY-DNHTCKAINHSA----AFLIISNRHSILVADLEEKGKDHRAQDIVV 145
VL+ D AI++ + +I A L+ G AQ +V
Sbjct: 356 LDTPDFTDIVLQVGDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSG----AQTLVN 411
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+ ++ +G+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR ++L P G
Sbjct: 412 TEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGL 471
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
++WTDWGENP+IE +DG +R +++T + WPNGL LD+ ++Y+ D+K D
Sbjct: 472 --MYWTDWGENPKIECANLDGRDRHVLVNTSLGWPNGLALDLQEGKLYWGDAKTD----- 524
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
KI N+DG+ L+ +L L
Sbjct: 525 -----------------------------KIEVINIDGTKRKTLLEDKLPHIFGFTLLGD 555
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+Y WTDW + IER+ ++R II
Sbjct: 556 FIY-----------WTDW-QRRSIERVHKVKASRDVII 581
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 117 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 165
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 166 ----WTDWGEAPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 221
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 222 NLDGSFRQKVVEGSLTHPFALTLSGD 247
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 122/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL +I + DP G +++WTD E I R +DGS
Sbjct: 351 LRRISLDTPDFTD-IVLQVGDIRHAIAIDYDPLEG--YVYWTD-DEVRAIRRAYLDGSGA 406
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
T+++T+I P+G+ +D + R LYW D G
Sbjct: 407 QTLVNTEINDPDGIAVDW------------------------------VARNLYWTDTGT 436
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G++ ILVS L E A+ L M ++WTDWGENP+I
Sbjct: 437 D----RIEVTRLNGTSRKILVSEDLDEPRAIVLHPVM---------GLMYWTDWGENPKI 483
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
E +DG +R +++T + WPNGL LD+ ++Y+ D+K D I+ N DGT R+ ++
Sbjct: 484 ECANLDGRDRHVLVNTSLGWPNGLALDLQEGKLYWGDAKTDKIEVINIDGTKRKTLLEDK 543
Query: 410 LMVEFTNDLMGD 421
L F L+GD
Sbjct: 544 LPHIFGFTLLGD 555
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 105/230 (45%), Gaps = 46/230 (20%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C T + C C G L D TC AFL+ ++R +I LE D
Sbjct: 609 GGCSHLCFFTPRATKCGCPIGLELLSDMKTCII---PEAFLVFTSRATIHRISLETNNND 665
Query: 138 ----------------------------------------HRAQDIVVSGLDLVEGLAYD 157
+ ++ GLD EG+A D
Sbjct: 666 VAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIEFGLDYPEGMAVD 725
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP 217
W+G ++YW D+ NRIEV +G R VL ++ PR + LDP+ G +++WT+WG P
Sbjct: 726 WMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTKG--YIYWTEWGGKP 783
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
RI R MDG+N T++ K+ N LT+D A +R+Y+ D + I+ ++
Sbjct: 784 RIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTNMIESSNM 832
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 141/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C + F
Sbjct: 890 DILVFHSSRQDGLNDCVHSNGQCGQLCLAIPGGHRCGCASHYTLDPSSRNCSP---PSTF 946
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+V+ GL V+ + YD + IYW+D R N I
Sbjct: 947 LLFSQKFAISRMIPD------DQLSPDLVLPLHGLRNVKAINYDPLDKFIYWVDGRQN-I 999
Query: 174 EVCDENGTNRIVLAKDNIT-----QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT +L + + QP + +D +R LFWT N I +DG
Sbjct: 1000 KRAKDDGTQPSMLTSPSQSLSPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLDGDA 1056
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1057 MGVVLRGDRDKPRAIAVNAERGYMYFTNMQ---------------------------DHA 1089
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A++DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1090 A-----KIERASLDGTEREVLFTTGLIRPVALVVDNALGK---------LFWVD-ADLKR 1134
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT + R +Y+ D + I+
Sbjct: 1135 IESCDLSGANRLTLEDANIVQPVGLT--VLGRHLYWIDRQQQMIE 1177
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 99/212 (46%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E I+
Sbjct: 654 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIE 713
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 714 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 769
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 770 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 817
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R VI DL F
Sbjct: 818 YWTDLDTNMIESSNMLGQER-MVIADDLPYPF 848
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 149/366 (40%), Gaps = 80/366 (21%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 175 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 234
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 235 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKWTGEQRKEILSA-LYSPMDIQVLSQE 289
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI-GKANMDGSNAS 307
R+ F + D C L + + R+ ++ GV L+ GK G+
Sbjct: 290 RQPPFHTPCEEDNGGCSHLCLLSP-------REPFYSCACPTGVQLQDNGKTCKTGAEEV 342
Query: 308 ILVS----------------------GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
+L++ G + A+A+D Y L+ +++WTD E
Sbjct: 343 LLLARRTDLRRISLDTPDFTDIVLQVGDIRHAIAID-------YDPLE--GYVYWTD-DE 392
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
I R +DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ +
Sbjct: 393 VRAIRRAYLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKIL 452
Query: 406 ILIDL------MVEFTNDLM-----GDN---------------------GVP-ALALDLE 432
+ DL ++ LM G+N G P LALDL+
Sbjct: 453 VSEDLDEPRAIVLHPVMGLMYWTDWGENPKIECANLDGRDRHVLVNTSLGWPNGLALDLQ 512
Query: 433 NGMLYY 438
G LY+
Sbjct: 513 EGKLYW 518
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 34/216 (15%)
Query: 208 LFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC-- 264
++WTD E + + G+ I+ + + P+GL D +++Y+ DS+ + I+
Sbjct: 76 VYWTDVSEEAIKQTYLNQTGAAAQNIVISGLVSPDGLACDWVGKKLYWTDSETNRIEVAN 135
Query: 265 -----------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+ L+ + +YW D G +I +A MDGS I+V
Sbjct: 136 LNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGEAP---RIERAGMDGSTRKIIVDSD 192
Query: 314 LY--EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
+Y L +DLE LY++ K + I R +DGS R ++ + P
Sbjct: 193 IYWPNGLTIDLEEQKLYWADAKLS------------FIHRANLDGSFRQKVVEGSLTHPF 240
Query: 372 GLTLDIATRRVYFADSKLDFIDFCN-YDGTGRQQVI 406
LTL T +Y+ D + I CN + G R++++
Sbjct: 241 ALTLSGDT--LYWTDWQTRSIHACNKWTGEQRKEIL 274
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N ++ +N A +E D ++++ +GL L
Sbjct: 1058 GVVLRGDRDKPRAIAVNAERGYMYFTNMQD-HAAKIERASLDGTEREVLFTTGLIRPVAL 1116
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + R L+W D
Sbjct: 1117 VVDNALGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPVGLTV----LGRHLYWID-R 1171
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T + ++ G+
Sbjct: 1172 QQQMIERVEKTTGDKRTRVQGRVTHLTGI 1200
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 25/139 (17%)
Query: 307 SILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTII 363
S +V+ L +A A+D + G +Y WTD E + + G+ I+
Sbjct: 54 STIVASGLEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAAQNIV 102
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNG 423
+ + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 103 ISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------DQ 151
Query: 424 VPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 152 PRAIALDPAHGYMYWTDWG 170
>gi|297492244|ref|XP_002699451.1| PREDICTED: low-density lipoprotein receptor-related protein 5 [Bos
taurus]
gi|296471561|tpg|DAA13676.1| TPA: low density lipoprotein receptor-related protein 5 [Bos
taurus]
Length = 1815
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 125/244 (51%), Gaps = 48/244 (19%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + LD
Sbjct: 300 QNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALD 359
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 360 PAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLS 417
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
FI +AN+DGS +V G L AL
Sbjct: 418 FIH----------------------------------RANLDGSFRQKVVEGSLTHPFAL 443
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L LY WTDW G R I+S +Y P + + R
Sbjct: 444 TLSGDTLY-----------WTDWQTRSIHACNKRTGDKRKEILSA-LYSPMDIQVLSPER 491
Query: 381 RVYF 384
+ Y+
Sbjct: 492 QPYY 495
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 139/330 (42%), Gaps = 89/330 (26%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL-------------- 118
E G CS +C + + Y C+C G L+ + TCKA L
Sbjct: 501 EDNGGCSHLCLLSPREPFYACACPTGVQLQDNGQTCKAGAEEVLLLARRTDLRRISLDTP 560
Query: 119 --------IISNRHSILV-----------ADLEEKGKDHR------AQDIVVSGLDLVEG 153
+ RH+I + D E + AQ +V + ++ +G
Sbjct: 561 DFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLVNTEINDPDG 620
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR ++L P G ++WTDW
Sbjct: 621 IAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGL--MYWTDW 678
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
GENP+IE +DG R +++T + WPNGL LD+ ++Y+ D+K D
Sbjct: 679 GENPKIECANLDGQERHILVNTSLGWPNGLALDLQEGKLYWGDAKTD------------- 725
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
KI ++DG+ L+ +L L +Y
Sbjct: 726 ---------------------KIEVIDVDGTKRRTLLEDKLPHIFGFTLLGDFIY----- 759
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ ++R II
Sbjct: 760 ------WTDW-QRRSIERVHKVKASRDVII 782
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 87/147 (59%), Gaps = 17/147 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 318 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 366
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 367 ----WTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 422
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGDN 422
N DG+ RQ+V+ L F L GD
Sbjct: 423 NLDGSFRQKVVEGSLTHPFALTLSGDT 449
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 120/242 (49%), Gaps = 20/242 (8%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTC---QDMNECEQPGYCSQMCTNTKG 89
C + G CS+ C TP C CP G L +D TC + ++ +T
Sbjct: 805 CADRNGGCSHLCFFTPRATKCGCPIGLELLSDMKTCIVPEAFLVFTSRAAIHRISLDTNN 864
Query: 90 SYIC----SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVV 145
+ + E L++D ++++ + + +I A + +H ++
Sbjct: 865 NDVAIPLTGVKEASALDFD------VSNNHIYWTDVSLKTISRAFMNGSSVEH----VIE 914
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
GLD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR + LDP+ G
Sbjct: 915 FGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTKG- 973
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+++WT+WG PRI R MDG+N T++ K+ N LT+D A +R+Y+ D + I+
Sbjct: 974 -YIYWTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTNMIESS 1031
Query: 266 SL 267
++
Sbjct: 1032 NM 1033
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI +D +N I T + + L D++ +Y+ D L F++ S+E I+
Sbjct: 855 IHRISLDTNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIE 914
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 915 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 970
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 971 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 1018
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ N G+++V++ D
Sbjct: 1019 YWTDLDTNMIESSNM--LGQERVVIAD 1043
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 140/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C + CSC Y L+ + C F
Sbjct: 1091 DILVFHSSRQDGLNDCMHNNGQCGQLCLAVPSGHRCSCASHYTLDPSSRNCSP---PTTF 1147
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D R+ D+++ GL V+ + YD + IYW+D R N I
Sbjct: 1148 LLFSQKCAISRMIPD------DQRSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQN-I 1200
Query: 174 EVCDENGTNRIVLAKDNITQ-----PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT VL + +Q P + +D +R LFWT N I ++G
Sbjct: 1201 KRAKDDGTQPFVLTSPSQSQNPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLNGDA 1257
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF TN+
Sbjct: 1258 MGMVLRGDRDKPRAIVVNAERGYLYF----------------TNMQDRAA---------- 1291
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A +DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1292 ------KIERAALDGTEREVLFTTGLIRPVALVVDNTLGK---------LFWVD-ADLKR 1335
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT + + +Y+ D + I+
Sbjct: 1336 IESCDLSGANRLTLEDANIVQPVGLT--VLGKHLYWIDRQQQMIE 1378
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 142/357 (39%), Gaps = 62/357 (17%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 376 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 435
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 436 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGDKRKEILSA-LYSPMDIQVLSPE 490
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
R+ Y+ + D C L + + R+ ++ GV L+ +
Sbjct: 491 RQPYYHTRCEEDNGGCSHLCLLSP-------REPFYACACPTGVQLQDNGQTCKAGAEEV 543
Query: 309 LVSGQLYEALALDLENGMLYYSTLKC--------------TRWLFWTDWGENPRIERIGM 354
L+ + + + L+ L+ +++WTD E I R +
Sbjct: 544 LLLARRTDLRRISLDTPDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTD-DEVRAIRRAYL 602
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL---- 410
DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 603 DGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPR 662
Query: 411 --MVEFTNDLM-----GDN---------------------GVP-ALALDLENGMLYY 438
++ LM G+N G P LALDL+ G LY+
Sbjct: 663 AIVLHPVMGLMYWTDWGENPKIECANLDGQERHILVNTSLGWPNGLALDLQEGKLYW 719
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N +L +N A +E D ++++ +GL L
Sbjct: 1259 GMVLRGDRDKPRAIVVNAERGYLYFTNMQD-RAAKIERAALDGTEREVLFTTGLIRPVAL 1317
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + + L+W D
Sbjct: 1318 VVDNTLGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPVGLTV----LGKHLYWID-R 1372
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ + T + ++ G+
Sbjct: 1373 QQQMIERVDKTTGDARTRVQGRVAHLTGI 1401
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 26/141 (18%)
Query: 305 NASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRST 361
++I+VSG L +A A+D + G +Y WTD E + + G+
Sbjct: 254 ESTIVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAVQN 301
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL
Sbjct: 302 VVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL----------- 350
Query: 422 NGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 351 DQPRAIALDPAHGYMYWTDWG 371
>gi|344256612|gb|EGW12716.1| Low-density lipoprotein receptor-related protein 5 [Cricetulus
griseus]
Length = 1608
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 134/275 (48%), Gaps = 55/275 (20%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ IV+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + L
Sbjct: 92 AQSIVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIAL 151
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 152 DPAHG--YMYWTDWGEAPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKL 209
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
FI +AN+DGS +V G L A
Sbjct: 210 SFIH----------------------------------RANLDGSFRQKVVEGSLTHPFA 235
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L L LY WTDW G R I+S +Y P +DI
Sbjct: 236 LTLSGDTLY-----------WTDWQTRSIHACNKWTGEKRKEILSA-LYSP----MDI-- 277
Query: 380 RRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
+V + + F C D G + L+ F
Sbjct: 278 -QVLSQERQPPFHTRCEEDNGGCSHLCLLSPREPF 311
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 139/330 (42%), Gaps = 89/330 (26%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN---------- 122
E G CS +C + + Y C+C G L+ + TCKA L
Sbjct: 294 EDNGGCSHLCLLSPREPFYSCACPTGVQLQDNGKTCKAGAEEVLLLARRTDLRRISLDTP 353
Query: 123 ------------RHSILV-----------ADLEEKGKDHR------AQDIVVSGLDLVEG 153
RH+I + D E + AQ +V + ++ +G
Sbjct: 354 DFTDIVLQVGDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLVNTEINDPDG 413
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR ++L P G ++WTDW
Sbjct: 414 IAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGL--MYWTDW 471
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
GENP+IE +DG +R +++T + WPNGL LD+ ++Y+ D+K D
Sbjct: 472 GENPKIECANLDGRDRHVLVNTSLGWPNGLALDLQEGKLYWGDAKTD------------- 518
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
KI N+DG+ L+ +L L +Y
Sbjct: 519 ---------------------KIEVINIDGTKRRTLLEDKLPHIFGFTLLGDFIY----- 552
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ ++R II
Sbjct: 553 ------WTDW-QRRSIERVHKVKASRDVII 575
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 111 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 159
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 160 ----WTDWGEAPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 215
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 216 NLDGSFRQKVVEGSLTHPFALTLSGD 241
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 105/230 (45%), Gaps = 46/230 (20%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C T + C C G L D TC AFL+ ++R +I LE D
Sbjct: 603 GGCSHLCFFTPHATKCGCPIGLELLSDMKTCII---PEAFLVFTSRATIHRISLETNNND 659
Query: 138 ----------------------------------------HRAQDIVVSGLDLVEGLAYD 157
+ ++ GLD EG+A D
Sbjct: 660 VAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIEFGLDYPEGMAVD 719
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP 217
W+G ++YW D+ NRIEV +G R VL ++ PR + LDP+ G +++WT+WG P
Sbjct: 720 WMGKNLYWADTGTNRIEVARLDGQFRQVLVWKDLDNPRSLALDPTKG--YIYWTEWGGKP 777
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
RI R MDG+N T++ K+ N LT+D A +R+Y+ D + I+ ++
Sbjct: 778 RIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTNMIESSNM 826
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 140/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C + F
Sbjct: 884 DILVFHSSRQDGLNDCVHSNGQCGQLCLAIPGGHRCGCASHYTLDPSSRNCSP---PSTF 940
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+V+ GL V+ + YD + IYW+D R N I
Sbjct: 941 LLFSQKFAISRMIPD------DQLSPDLVLPLHGLRNVKAINYDPLDKFIYWVDGRQN-I 993
Query: 174 EVCDENGTNRIVLAKDNIT-----QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT L + + QP + +D +R LFWT N I +DG
Sbjct: 994 KRAKDDGTQPSTLTSPSQSLSPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLDGDA 1050
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1051 MGVVLRGDRDKPRAIAVNAERGYMYFTNMQ---------------------------DHA 1083
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A++DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1084 A-----KIERASLDGTEREVLFTTGLIRPVALVVDNTLGK---------LFWVD-ADLKR 1128
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT + R +Y+ D + I+
Sbjct: 1129 IESCDLSGANRLTLEDANIVQPVGLT--VLGRHLYWIDRQQQMIE 1171
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 99/212 (46%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E I+
Sbjct: 648 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIE 707
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 708 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWKDLDNPRSLALDP 763
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 764 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 811
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R VI DL F
Sbjct: 812 YWTDLDTNMIESSNMLGQER-MVIADDLPYPF 842
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 208 LFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC-- 264
++WTD E + + G+ +I+ + + P+GL D +++Y+ DS+ + I+
Sbjct: 70 VYWTDVSEEAIKQTYLNQTGAAAQSIVISGLVSPDGLACDWVGKKLYWTDSETNRIEVAN 129
Query: 265 -----------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+ L+ + +YW D G +I +A MDGS I+V
Sbjct: 130 LNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGEAP---RIERAGMDGSTRKIIVDSD 186
Query: 314 LY--EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
+Y L +DLE LY++ K + I R +DGS R ++ + P
Sbjct: 187 IYWPNGLTIDLEEQKLYWADAKLS------------FIHRANLDGSFRQKVVEGSLTHPF 234
Query: 372 GLTLDIATRRVYFADSKLDFIDFCN-YDGTGRQQVI 406
LTL T +Y+ D + I CN + G R++++
Sbjct: 235 ALTLSGDT--LYWTDWQTRSIHACNKWTGEKRKEIL 268
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 149/366 (40%), Gaps = 80/366 (21%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 169 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 228
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 229 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKWTGEKRKEILSA-LYSPMDIQVLSQE 283
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI-GKANMDGSNAS 307
R+ F + D C L + + R+ ++ GV L+ GK G+
Sbjct: 284 RQPPFHTRCEEDNGGCSHLCLLSP-------REPFYSCACPTGVQLQDNGKTCKAGAEEV 336
Query: 308 ILVS----------------------GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
+L++ G + A+A+D Y L+ +++WTD E
Sbjct: 337 LLLARRTDLRRISLDTPDFTDIVLQVGDIRHAIAID-------YDPLE--GYVYWTD-DE 386
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
I R +DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ +
Sbjct: 387 VRAIRRAYLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKIL 446
Query: 406 ILIDL------MVEFTNDLM-----GDN---------------------GVP-ALALDLE 432
+ DL ++ LM G+N G P LALDL+
Sbjct: 447 VSEDLDEPRAIVLHPVMGLMYWTDWGENPKIECANLDGRDRHVLVNTSLGWPNGLALDLQ 506
Query: 433 NGMLYY 438
G LY+
Sbjct: 507 EGKLYW 512
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N ++ +N A +E D ++++ +GL L
Sbjct: 1052 GVVLRGDRDKPRAIAVNAERGYMYFTNMQD-HAAKIERASLDGTEREVLFTTGLIRPVAL 1110
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + R L+W D
Sbjct: 1111 VVDNTLGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPVGLTV----LGRHLYWID-R 1165
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T + ++ G+
Sbjct: 1166 QQQMIERVEKTTGDKRTRVQGRVTHLTGI 1194
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 25/139 (17%)
Query: 307 SILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTII 363
S +V+ L +A A+D + G +Y WTD E + + G+ +I+
Sbjct: 48 STIVASGLEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAAQSIV 96
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNG 423
+ + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 97 ISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------DQ 145
Query: 424 VPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 146 PRAIALDPAHGYMYWTDWG 164
>gi|327260141|ref|XP_003214894.1| PREDICTED: low-density lipoprotein receptor-related protein 5-like
[Anolis carolinensis]
Length = 1693
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 126/245 (51%), Gaps = 48/245 (19%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
Q+++VSGL +GLA DWIG +YW DS NRIEV + NGT+R VL ++ QPR + L
Sbjct: 175 VQNVIVSGLVSPDGLACDWIGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIAL 234
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP+ G +++WTDWGE PRIER GMD S R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 235 DPAHG--YMYWTDWGETPRIERAGMDSSVRKIIVDSDIYWPNGLTIDLEEQKLYWADAKL 292
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
FI +AN+DGS +V G L A
Sbjct: 293 SFIH----------------------------------RANLDGSFREKVVEGSLTHPFA 318
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L L LY WTDW G R I+S+ +Y P + + +
Sbjct: 319 LTLAGDTLY-----------WTDWQTRSIHACNKRTGEKRREILSS-LYSPMDIQVLSSE 366
Query: 380 RRVYF 384
R+ YF
Sbjct: 367 RQPYF 371
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 154/338 (45%), Gaps = 61/338 (18%)
Query: 33 CKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C+ G CS+ C +P C CP G L D TC+ E+ ++ + S
Sbjct: 375 CEDNNGGCSHLCLLSPRDPFYSCNCPTGVQLQEDGKTCK--AGAEEVLLLARRTDLRRIS 432
Query: 91 YICSCNEGYVLEYDN-HTCKAINHSAA----FLIISNRHSILVADLEEKGKDHRAQDIVV 145
+L+ DN AI++ + + +I A L+ G AQ IV
Sbjct: 433 LDMPDFTDIILQIDNIRHAIAIDYDPVDGYIYWTDDDIRAIRRAFLDGTG----AQTIVS 488
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+ +D +G+A DW+ ++YW D+ +RIEV NGT+R +L +N+ +PR ++L+P G
Sbjct: 489 TEIDHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILISENLDEPRAIVLNPVMG- 547
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+++WTDWGENP+IE +DGS R +++T + WPNGL LD+ ++Y+ D+K+D
Sbjct: 548 -YMYWTDWGENPKIECAYLDGSERKVLVNTSLGWPNGLALDLEESKLYWGDAKID----- 601
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
KI N+DG+ L+ +L L
Sbjct: 602 -----------------------------KIEVINLDGTMRKTLIEDKLPHIFGFTLLGD 632
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+Y WTDW + IER+ ++R II
Sbjct: 633 YIY-----------WTDW-QRRSIERVHKIRASRDIII 658
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 152/356 (42%), Gaps = 100/356 (28%)
Query: 68 CQDMNECEQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHS 125
C+D N G CS +C + Y C+C G L+ D TCKA + L+++ R
Sbjct: 375 CEDNN-----GGCSHLCLLSPRDPFYSCNCPTGVQLQEDGKTCKA--GAEEVLLLARR-- 425
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
+ L RI + D I+
Sbjct: 426 ------------------------------------------TDLRRISL-DMPDFTDII 442
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
L DNI + DP G +++WTD + I R +DG+ TI+ST+I P+G+ +
Sbjct: 443 LQIDNIRHAIAIDYDPVDG--YIYWTD-DDIRAIRRAFLDGTGAQTIVSTEIDHPDGIAV 499
Query: 246 DIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305
D + R LYW D G + +I ++G++
Sbjct: 500 DW------------------------------VARNLYWTDTGTD----RIEVTRLNGTS 525
Query: 306 ASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
IL+S L E A+ L M Y ++WTDWGENP+IE +DGS R +++T
Sbjct: 526 RKILISENLDEPRAIVLNPVMGY---------MYWTDWGENPKIECAYLDGSERKVLVNT 576
Query: 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+ WPNGL LD+ ++Y+ D+K+D I+ N DGT R+ +I L F L+GD
Sbjct: 577 SLGWPNGLALDLEESKLYWGDAKIDKIEVINLDGTMRKTLIEDKLPHIFGFTLLGD 632
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 86/146 (58%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
I +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 194 IGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 242
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMD S R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 243 ----WTDWGETPRIERAGMDSSVRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 298
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ R++V+ L F L GD
Sbjct: 299 NLDGSFREKVVEGSLTHPFALTLAGD 324
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 104/226 (46%), Gaps = 47/226 (20%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E G CS +C T C+C G L D TC AFL+ ++R +I
Sbjct: 679 NPCAENNGGCSHLCFFTPQECRCACPIGLELLSDMKTCII---PEAFLVFTSRAAIHRIS 735
Query: 131 LEEKG----------KDHRAQDIVVS------------------------------GLDL 150
LE K+ A D VS GLD
Sbjct: 736 LETNNNDVAIPLTGVKEASALDFDVSDNRIYWTDISLKTISRAFMNGSTVEHVIEFGLDY 795
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR + LDPS G +++W
Sbjct: 796 PEGMAVDWMGKNLYWADTGTNRIEVARLDGLYRQVLVWKDLDNPRSLALDPSKG--YMYW 853
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
T+WG P+I R MDGSN T++ K+ N LT+D +R+Y+ D
Sbjct: 854 TEWGGKPKIIRAYMDGSNSITLVD-KVGRANDLTIDYEDQRLYWTD 898
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 138/356 (38%), Gaps = 98/356 (27%)
Query: 59 EILSNDSVTCQDMNECEQP-GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S NEC Q G+C Q+C Y C C Y LE + C + + F
Sbjct: 967 DILVFHSSRQDGFNECVQSNGHCGQLCLAIPNGYTCGCASHYTLEPNGRNCSSPSSFLLF 1026
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEV 175
S S ++ D D ++ DI+ + GL V+ + YD + IYW+D R N I+
Sbjct: 1027 SQKSAI-SRMIPD------DQQSPDIILPIHGLRNVKAIDYDPLDKLIYWVDGRQNIIK- 1078
Query: 176 CDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST 235
AKD+ TQP +M P + +NP +
Sbjct: 1079 ----------RAKDDGTQPFTVMGTP----------NQSQNPEKQ--------------- 1103
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
P+ L++DI + LYW E N V +
Sbjct: 1104 ----PHDLSIDIFSH------------------------------TLYWTCEATNTVNVH 1129
Query: 296 IGKANMDGSNASILVSGQ--LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
++G I++ G A+ ++ E G +Y++ ++ P+IER
Sbjct: 1130 ----RLNGEQIGIVLRGDHDKPRAIVVNAERGYMYFTNMQ----------ERAPKIERAA 1175
Query: 354 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
+DG+ R + +T + P L +D ++++ D+ L I+ C+ G R V L+D
Sbjct: 1176 LDGTEREVLFTTGLLRPVALVIDNKLGKLFWVDADLKRIESCDLSGANR--VTLLD 1229
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 98/212 (46%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ R+Y+ D L F++ ++E I+
Sbjct: 731 IHRISLETNNNDVAIPLTGVKEASALDFDVSDNRIYWTDISLKTISRAFMNGSTVEHVIE 790
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 791 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGLYRQVLVWKDLDNPRSLALDP 846
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I R MDGSN T++ K+ N LT+D +R+
Sbjct: 847 SKGYMY-----------WTEWGGKPKIIRAYMDGSNSITLVD-KVGRANDLTIDYEDQRL 894
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D I N G R ++I DL F
Sbjct: 895 YWTDLDTSMIVSSNMLGQER-EIIADDLPHPF 925
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 128/292 (43%), Gaps = 29/292 (9%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 252 IERAGMDSSVRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFREKVVEG 311
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S+ +Y P + + +
Sbjct: 312 SLTHPFALTL----AGDTLYWTDWQTRSIHACNKRTGEKRREILSS-LYSPMDIQVLSSE 366
Query: 250 RRVYFADSKLDFI-DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI-GKANMDGSNAS 307
R+ YF D C L + + R ++ GV L+ GK G+
Sbjct: 367 RQPYFHTPCEDNNGGCSHLCLLSP-------RDPFYSCNCPTGVQLQEDGKTCKAGAEEV 419
Query: 308 ILVSGQL-YEALALDLENGMLYYSTLKCTR------------WLFWTDWGENPRIERIGM 354
+L++ + ++LD+ + + R +++WTD + I R +
Sbjct: 420 LLLARRTDLRRISLDMPDFTDIILQIDNIRHAIAIDYDPVDGYIYWTD-DDIRAIRRAFL 478
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
DG+ TI+ST+I P+G+ +D R +Y+ D+ D I+ +GT R+ +I
Sbjct: 479 DGTGAQTIVSTEIDHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILI 530
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D+ +AI N ++ +N +E D ++++ +GL L
Sbjct: 1137 GIVLRGDHDKPRAIVVNAERGYMYFTNMQE-RAPKIERAALDGTEREVLFTTGLLRPVAL 1195
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + L+W D
Sbjct: 1196 VIDNKLGKLFWVDADLKRIESCDLSGANRVTLLDSNILQPMGLTV----LGNHLYWID-R 1250
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IERI + I +I +G+
Sbjct: 1251 QQQMIERIEKTNGYKRARIQGRIAHLSGI 1279
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 22/140 (15%)
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTI 362
+ ++I+VSG L +A A+D LY ++ ++WTD E + G+ +
Sbjct: 129 AESTIVVSG-LEDAAAVDF----LYSQSV-----IYWTDVSEEAIKQTYFNQTGNLVQNV 178
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 179 IVSGLVSPDGLACDWIGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------D 227
Query: 423 GVPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 228 QPRAIALDPAHGYMYWTDWG 247
>gi|188536057|ref|NP_001099791.2| low-density lipoprotein receptor-related protein 5 precursor
[Rattus norvegicus]
gi|187469459|gb|AAI66786.1| Lrp5 protein [Rattus norvegicus]
Length = 1600
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 125/245 (51%), Gaps = 48/245 (19%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ+IV+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + L
Sbjct: 99 AQNIVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIAL 158
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 159 DPAHG--YMYWTDWGEAPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKL 216
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
FI +AN+DGS +V G L A
Sbjct: 217 SFIH----------------------------------RANLDGSFRQKVVEGSLTHPFA 242
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L L LY WTDW G R I+S +Y P + +
Sbjct: 243 LTLSGDTLY-----------WTDWQTRSIHACNKWTGEKRKEILSA-LYSPMDIQVLSQE 290
Query: 380 RRVYF 384
R+ F
Sbjct: 291 RQPPF 295
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 141/332 (42%), Gaps = 90/332 (27%)
Query: 74 CEQP-GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN-------- 122
CE+ G CS +C + + Y C+C G L+ + TCKA L
Sbjct: 299 CEEGNGGCSHLCLLSPREPFYSCACPTGVQLQDNGKTCKAGAEEVLLLARRTDLRRISLD 358
Query: 123 --------------RHSILV-----------ADLEEKGKDHR------AQDIVVSGLDLV 151
RH+I + D E + AQ +V + ++
Sbjct: 359 TPDFTDIVLQVGDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLVNTEINDP 418
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
+G+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR ++L P G ++WT
Sbjct: 419 DGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGL--MYWT 476
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
DWGENP+IE +DG +R +++T + WPNGL LD+ ++Y+ D+K D
Sbjct: 477 DWGENPKIECANLDGRDRHVLVNTSLGWPNGLALDLQEGKLYWGDAKTD----------- 525
Query: 272 NVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYST 331
KI N+DG+ L+ +L L +Y
Sbjct: 526 -----------------------KIEVINIDGTKRQTLLEDKLPHIFGFTLLGDFIY--- 559
Query: 332 LKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ ++R II
Sbjct: 560 --------WTDW-QRRSIERVHKVKASRDVII 582
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 118 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 166
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 167 ----WTDWGEAPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 222
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 223 NLDGSFRQKVVEGSLTHPFALTLSGD 248
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 105/230 (45%), Gaps = 46/230 (20%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C T + C C G L D TC AFL+ ++R +I LE D
Sbjct: 610 GGCSHLCFFTPHATKCGCPIGLELLSDMKTCII---PEAFLVFTSRATIHRISLETNNND 666
Query: 138 ----------------------------------------HRAQDIVVSGLDLVEGLAYD 157
+ ++ GLD EG+A D
Sbjct: 667 VAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIEFGLDYPEGMAVD 726
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP 217
W+G ++YW D+ NRIEV +G R VL ++ PR + LDP+ G +++WT+WG P
Sbjct: 727 WMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTKG--YIYWTEWGGKP 784
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
RI R MDG+N T++ K+ N LT+D A +R+Y+ D + I+ ++
Sbjct: 785 RIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTNMIESSNM 833
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 141/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNECEQP-GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C + F
Sbjct: 891 DILVFHSSRQDGLNDCVHSNGQCGQLCLAIPGGHRCGCASHYTLDPSSRNCSP---PSTF 947
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+++ GL V+ + YD + IYW+D R N I
Sbjct: 948 LLFSQKFAISRMIPD------DQLSPDLILPLHGLRNVKAINYDPLDKFIYWVDGRQN-I 1000
Query: 174 EVCDENGTNRIVLAKDNIT-----QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT +L + + QP + +D +R LFWT N I +DG
Sbjct: 1001 KRAKDDGTQPSMLTSPSQSLSPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLDGDA 1057
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1058 MGVVLRGDRDRPRAIAVNAERGYMYFTNMQ---------------------------DHA 1090
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A++DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1091 A-----KIERASLDGTEREVLFTTGLIRPVALVVDNALGK---------LFWVD-ADLKR 1135
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT + R +Y+ D + I+
Sbjct: 1136 IESCDLSGANRLTLEDANIVQPVGLT--VLGRHLYWIDRQQQMIE 1178
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 99/212 (46%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E I+
Sbjct: 655 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIE 714
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 715 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 770
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 771 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 818
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R VI DL F
Sbjct: 819 YWTDLDTNMIESSNMLGQER-MVIADDLPYPF 849
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 34/216 (15%)
Query: 208 LFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC-- 264
++WTD E + + G+ I+ + + P+GL D +++Y+ DS+ + I+
Sbjct: 77 VYWTDVSEEAIKQTYLNQTGAAAQNIVISGLVSPDGLACDWVGKKLYWTDSETNRIEVAN 136
Query: 265 -----------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+ L+ + +YW D G +I +A MDGS I+V
Sbjct: 137 LNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGEAP---RIERAGMDGSTRKIIVDSD 193
Query: 314 LY--EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
+Y L +DLE LY++ K + I R +DGS R ++ + P
Sbjct: 194 IYWPNGLTIDLEEQKLYWADAKLS------------FIHRANLDGSFRQKVVEGSLTHPF 241
Query: 372 GLTLDIATRRVYFADSKLDFIDFCN-YDGTGRQQVI 406
LTL T +Y+ D + I CN + G R++++
Sbjct: 242 ALTLSGDT--LYWTDWQTRSIHACNKWTGEKRKEIL 275
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 149/367 (40%), Gaps = 82/367 (22%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 176 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 235
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 236 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKWTGEKRKEILSA-LYSPMDIQVLSQE 290
Query: 250 RRVYFADSKLDFIDCKSLEIKTNVNYSTIF--RKLYWIDEGGNGVPLKI-GKANMDGSNA 306
R+ F C+ E ++ + R+ ++ GV L+ GK G+
Sbjct: 291 RQPPF------HTPCE--EGNGGCSHLCLLSPREPFYSCACPTGVQLQDNGKTCKAGAEE 342
Query: 307 SILVS----------------------GQLYEALALDLENGMLYYSTLKCTRWLFWTDWG 344
+L++ G + A+A+D Y L+ +++WTD
Sbjct: 343 VLLLARRTDLRRISLDTPDFTDIVLQVGDIRHAIAID-------YDPLE--GYVYWTD-D 392
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
E I R +DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+
Sbjct: 393 EVRAIRRAYLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKI 452
Query: 405 VILIDL------MVEFTNDLM-----GDN---------------------GVP-ALALDL 431
++ DL ++ LM G+N G P LALDL
Sbjct: 453 LVSEDLDEPRAIVLHPVMGLMYWTDWGENPKIECANLDGRDRHVLVNTSLGWPNGLALDL 512
Query: 432 ENGMLYY 438
+ G LY+
Sbjct: 513 QEGKLYW 519
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N ++ +N A +E D ++++ +GL L
Sbjct: 1059 GVVLRGDRDRPRAIAVNAERGYMYFTNMQD-HAAKIERASLDGTEREVLFTTGLIRPVAL 1117
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + R L+W D
Sbjct: 1118 VVDNALGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPVGLTV----LGRHLYWID-R 1172
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T + ++ G+
Sbjct: 1173 QQQMIERVEKTTGDKRTRVQGRVTHLTGI 1201
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 25/139 (17%)
Query: 307 SILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTII 363
S +V+ L +A A+D + G +Y WTD E + + G+ I+
Sbjct: 55 STIVASGLEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAAQNIV 103
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNG 423
+ + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 104 ISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------DQ 152
Query: 424 VPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 153 PRAIALDPAHGYMYWTDWG 171
>gi|348564748|ref|XP_003468166.1| PREDICTED: low-density lipoprotein receptor-related protein 5-like
[Cavia porcellus]
Length = 1784
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 135/274 (49%), Gaps = 55/274 (20%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q+++VSGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + LD
Sbjct: 271 QNVIVSGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALD 330
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWGE PRIER GMDGS R I+ ++IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 331 PAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSEIYWPNGLTIDLEEQKLYWADAKLS 388
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
FI +AN+DGS +V G L AL
Sbjct: 389 FIH----------------------------------RANLDGSFRQKVVEGSLTHPFAL 414
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L LY WTDW G R I+S +Y P +DI
Sbjct: 415 TLSGDTLY-----------WTDWQTRSIHACNKRTGEKRKEILSA-LYSP----MDI--- 455
Query: 381 RVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
+V + + F C D G + L+ F
Sbjct: 456 QVLSQERQPSFHTQCEEDNGGCSHLCLLSPREPF 489
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 151/344 (43%), Gaps = 71/344 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKG 89
+C+ G CS+ C +P C CP G L ++ TC+ E+ ++ +
Sbjct: 469 QCEEDNGGCSHLCLLSPREPFYTCACPTGVQLQDNGRTCK--AGAEEVLLLARRTDLRRI 526
Query: 90 SYICSCNEGYVLEYDNHTCKAINHSAA----------FLIISNRHSILVADLEEKGKDHR 139
S VL+ D+ I H+ A + +I A L+ G
Sbjct: 527 SLDTPDFTDIVLQVDD-----IRHAIAIDYDPLEGHVYWTDDEVRAIRRARLDGSG---- 577
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ +V + ++ +G+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR ++L
Sbjct: 578 AQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIVL 637
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G ++WTDWGENP+IE +DG R +++T + WPNGL LD+ ++Y+ D+K
Sbjct: 638 HPVMGL--MYWTDWGENPKIECANLDGRERHVLVNTSLGWPNGLALDLQEGKLYWGDAKT 695
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI NMDG+ L+ +L
Sbjct: 696 D----------------------------------KIEVINMDGTKRRTLLEDKLPHIFG 721
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ ++R II
Sbjct: 722 FTLLGDFIY-----------WTDW-QRRSIERVHKVKASRDVII 753
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 88/147 (59%), Gaps = 17/147 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 289 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 337
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ ++IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 338 ----WTDWGETPRIERAGMDGSTRKIIVDSEIYWPNGLTIDLEEQKLYWADAKLSFIHRA 393
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGDN 422
N DG+ RQ+V+ L F L GD
Sbjct: 394 NLDGSFRQKVVEGSLTHPFALTLSGDT 420
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 151/353 (42%), Gaps = 96/353 (27%)
Query: 72 NECEQP-GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILV 128
+CE+ G CS +C + + Y C+C G L+ + TCKA + L+++ R
Sbjct: 468 TQCEEDNGGCSHLCLLSPREPFYTCACPTGVQLQDNGRTCKA--GAEEVLLLARR----- 520
Query: 129 ADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK 188
+ L RI + + T+ IVL
Sbjct: 521 ---------------------------------------TDLRRISLDTPDFTD-IVLQV 540
Query: 189 DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248
D+I + DP G ++WTD E I R +DGS T+++T+I P+G+ +D
Sbjct: 541 DDIRHAIAIDYDPLEGH--VYWTD-DEVRAIRRARLDGSGAQTLVNTEINDPDGIAVDW- 596
Query: 249 TRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
+ R LYW D G + +I ++G++ I
Sbjct: 597 -----------------------------VARNLYWTDTGTD----RIEVTRLNGTSRKI 623
Query: 309 LVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY 368
LVS L E A+ L M ++WTDWGENP+IE +DG R +++T +
Sbjct: 624 LVSEDLDEPRAIVLHPVMGL---------MYWTDWGENPKIECANLDGRERHVLVNTSLG 674
Query: 369 WPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
WPNGL LD+ ++Y+ D+K D I+ N DGT R+ ++ L F L+GD
Sbjct: 675 WPNGLALDLQEGKLYWGDAKTDKIEVINMDGTKRRTLLEDKLPHIFGFTLLGD 727
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 106/230 (46%), Gaps = 46/230 (20%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C T + C C G L D TC AFL+ ++R +I LE D
Sbjct: 781 GGCSHLCFFTPHATKCGCPIGLELLSDMKTCIV---PEAFLVFTSRAAIHRISLETNNND 837
Query: 138 ----------------------------------------HRAQDIVVSGLDLVEGLAYD 157
+ ++ GLD EG+A D
Sbjct: 838 VAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIEFGLDYPEGMAVD 897
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP 217
W+G ++YW D+ NRIEV +G R VL ++ PR + LDP+ G +++WT+WG P
Sbjct: 898 WMGKNLYWADTGTNRIEVARLDGQFRQVLVWKDLDNPRSLALDPTKG--YIYWTEWGGKP 955
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
RI R MDG+N T+++ K+ N LT+D A +R+Y+ D + I+ ++
Sbjct: 956 RIVRAFMDGTNCMTLVN-KVGRANDLTIDYADQRLYWTDLDTNMIESSNM 1004
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 142/343 (41%), Gaps = 65/343 (18%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C + F
Sbjct: 1062 DILVFHSSRQDGLNDCVHNNGQCGQLCLAIPGGHRCGCASHYTLDPSSRNCSP---PSTF 1118
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+++ GL V+ + YD + IYW+D R N I
Sbjct: 1119 LLFSQKCAISRMIPD------DQHSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQN-I 1171
Query: 174 EVCDENGTNRIVL---AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS 230
+ ++G+ VL + QP + +D +R LFWT N I +DG
Sbjct: 1172 KRAKDDGSQAFVLTSLGQSPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLDGDAMG 1228
Query: 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN 290
++ P +T++ +YF + + +
Sbjct: 1229 VVLRGDRDRPRAITVNAERGYLYFTNMQ-------------------------------D 1257
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
P KI +A++DG+ +L + L +AL ++N + LFW D + RIE
Sbjct: 1258 RAP-KIERASLDGTEREVLFTTGLIRPVALVVDNSLGK---------LFWVD-ADLKRIE 1306
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
+ G+NR T+ I P GLT + R +Y+ D + I+
Sbjct: 1307 SCDLSGANRLTLEDASIVQPVGLT--VLGRHLYWIDRQQQMIE 1347
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E I+
Sbjct: 826 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIE 885
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 886 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWKDLDNPRSLALDP 941
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T+++ K+ N LT+D A +R+
Sbjct: 942 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVN-KVGRANDLTIDYADQRL 989
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ N G+++V++ D
Sbjct: 990 YWTDLDTNMIESSNM--LGQERVVIAD 1014
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N +L +N +E D ++++ +GL L
Sbjct: 1228 GVVLRGDRDRPRAITVNAERGYLYFTNMQD-RAPKIERASLDGTEREVLFTTGLIRPVAL 1286
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L +I QP G+ + R L+W D
Sbjct: 1287 VVDNSLGKLFWVDADLKRIESCDLSGANRLTLEDASIVQPVGLTV----LGRHLYWID-R 1341
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T I ++ G+
Sbjct: 1342 QQQMIERVEKTTGDKRTRIQGRVAHLTGI 1370
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 30/169 (17%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDLENGMLYYS 330
++Y + +YW D+ I +A +DGS A LV+ ++ + +A+D
Sbjct: 549 IDYDPLEGHVYWTDDEVRA----IRRARLDGSGAQTLVNTEINDPDGIAVDW-------- 596
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD-SKL 389
R L+WTD G + RIE ++G++R ++S + P + L +Y+ D +
Sbjct: 597 ---VARNLYWTDTGTD-RIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGLMYWTDWGEN 652
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYY 438
I+ N DG R++ +L++ + + N LALDL+ G LY+
Sbjct: 653 PKIECANLDG--RERHVLVNTSLGWPN---------GLALDLQEGKLYW 690
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 26/141 (18%)
Query: 305 NASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRST 361
++I+VSG L +A A+D + G +Y WTD E + + G
Sbjct: 225 ESTIVVSG-LEDAAAVDFQFSKGTVY-----------WTDVSEEAIKQTYLNQTGVATQN 272
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+I + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL
Sbjct: 273 VIVSGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL----------- 321
Query: 422 NGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 322 DQPRAIALDPAHGYMYWTDWG 342
>gi|297267258|ref|XP_001117791.2| PREDICTED: low-density lipoprotein receptor-related protein 5-like
[Macaca mulatta]
Length = 1226
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 125/244 (51%), Gaps = 48/244 (19%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + LD
Sbjct: 241 QNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALD 300
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 301 PAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLS 358
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
FI +AN+DGS +V G L AL
Sbjct: 359 FIH----------------------------------RANLDGSFRQKVVEGSLTHPFAL 384
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L LY WTDW G R I+S +Y P + + R
Sbjct: 385 TLSGDTLY-----------WTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQER 432
Query: 381 RVYF 384
+ +F
Sbjct: 433 QPFF 436
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 148/344 (43%), Gaps = 71/344 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKG 89
C+ G CS+ C +P C CP G L ++ TC+ E+ ++ +
Sbjct: 439 RCEEDNGGCSHLCLLSPREPFYTCACPTGVQLQDNGRTCK--AGAEEVLLLARRTDLRRI 496
Query: 90 SYICSCNEGYVLEYDNHTCKAINHSAA----------FLIISNRHSILVADLEEKGKDHR 139
S VL+ D+ I H+ A + +I A L+ G
Sbjct: 497 SLDTPDFTDIVLQVDD-----IRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSG---- 547
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ +V + ++ +G+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR + L
Sbjct: 548 AQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIAL 607
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G ++WTDWGENP+IE +DG R +++ + WPNGL LD+ ++Y+ D+K
Sbjct: 608 HPVMGL--MYWTDWGENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYWGDAKT 665
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N+DG+ L+ +L
Sbjct: 666 D----------------------------------KIEVINVDGTKRRTLLEDKLPHIFG 691
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ ++R II
Sbjct: 692 FTLLGDFIY-----------WTDW-QRRSIERVHKVKASRDVII 723
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 87/147 (59%), Gaps = 17/147 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 259 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 307
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 308 ----WTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 363
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGDN 422
N DG+ RQ+V+ L F L GD
Sbjct: 364 NLDGSFRQKVVEGSLTHPFALTLSGDT 390
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 148/349 (42%), Gaps = 95/349 (27%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE 132
E G CS +C + + Y C+C G L+ + TCKA + L+++ R
Sbjct: 442 EDNGGCSHLCLLSPREPFYTCACPTGVQLQDNGRTCKA--GAEEVLLLARR--------- 490
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
+ L RI + + T+ IVL D+I
Sbjct: 491 -----------------------------------TDLRRISLDTPDFTD-IVLQVDDIR 514
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
+ DP G +++WTD E I R +DGS T+++T+I P+G+ +D
Sbjct: 515 HAIAIDYDPLEG--YVYWTD-DEVRAIRRAYLDGSGAQTLVNTEINDPDGIAVDW----- 566
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+ R LYW D G + +I ++G++ ILVS
Sbjct: 567 -------------------------VARNLYWTDTGTD----RIEVTRLNGTSRKILVSE 597
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
L E A+ L M ++WTDWGENP+IE +DG R +++ + WPNG
Sbjct: 598 DLDEPRAIALHPVMGL---------MYWTDWGENPKIECANLDGQERRVLVNASLGWPNG 648
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
L LD+ ++Y+ D+K D I+ N DGT R+ ++ L F L+GD
Sbjct: 649 LALDLQEGKLYWGDAKTDKIEVINVDGTKRRTLLEDKLPHIFGFTLLGD 697
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 99/256 (38%), Gaps = 68/256 (26%)
Query: 68 CQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL 127
C D N G CS +C T + C C G L D TC AFL+ ++R +I
Sbjct: 746 CADRN-----GGCSHLCFFTPHATRCGCPIGLELLSDMKTCIV---PEAFLVFTSRAAIH 797
Query: 128 VADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN--------------RI 173
LE D I ++G+ L +D HIYW D L ++
Sbjct: 798 RISLETNNND---VAIPLTGVKEASALDFDVSNNHIYWTDVSLKVFDDAMKNSLAQSFKL 854
Query: 174 EVCDENGT--------NRIVLAKDNITQP----------------RGMMLDPS----PGT 205
C +G + V + +T P R L PS P
Sbjct: 855 SHCGNSGRWPSDHPWRDMCVAGGEGLTLPCFLRVAFSRTGRAELKRWGQLHPSATRCPAV 914
Query: 206 R--------------WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
R +++WT+WG PRI R MDG+N T++ K+ N LT+D A +R
Sbjct: 915 RVDSPSRPFSLVPSSYIYWTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQR 973
Query: 252 VYFADSKLDFIDCKSL 267
+Y+ D + I+ ++
Sbjct: 974 LYWTDLDTNMIESSNM 989
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 21/208 (10%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLDFID-------CKSLEIK 270
I RI ++ +N I T + + L D++ +Y+ D L D +S ++
Sbjct: 796 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKVFDDAMKNSLAQSFKLS 855
Query: 271 TNVNYSTIFRKLYWID---EGGNGV--PLKIGKANMDGSNASILVSGQLYEAL----ALD 321
N W D GG G+ P + A A + GQL+ + A+
Sbjct: 856 HCGNSGRWPSDHPWRDMCVAGGEGLTLPCFLRVAFSRTGRAELKRWGQLHPSATRCPAVR 915
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 381
+++ +S L + +++WT+WG PRI R MDG+N T++ K+ N LT+D A +R
Sbjct: 916 VDSPSRPFS-LVPSSYIYWTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQR 973
Query: 382 VYFADSKLDFIDFCNYDGTGRQQVILID 409
+Y+ D + I+ N G+++V++ D
Sbjct: 974 LYWTDLDTNMIESSNM--LGQERVVIAD 999
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 140/358 (39%), Gaps = 64/358 (17%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 317 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 376
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P +DI
Sbjct: 377 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGGKRKEILSA-LYSP----MDIQV 427
Query: 250 RRVYFADSKLDFIDCKSLEIKTNVNYSTIF--RKLYWIDEGGNGVPLKIGKANMDGSNAS 307
+ + F + E ++ + R+ ++ GV L+
Sbjct: 428 ----LSQERQPFFHTRCEEDNGGCSHLCLLSPREPFYTCACPTGVQLQDNGRTCKAGAEE 483
Query: 308 ILVSGQLYEALALDLENGMLYYSTLKC--------------TRWLFWTDWGENPRIERIG 353
+L+ + + + L+ L+ +++WTD E I R
Sbjct: 484 VLLLARRTDLRRISLDTPDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTD-DEVRAIRRAY 542
Query: 354 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL--- 410
+DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 543 LDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEP 602
Query: 411 ---MVEFTNDLM-----GDN---------------------GVP-ALALDLENGMLYY 438
+ LM G+N G P LALDL+ G LY+
Sbjct: 603 RAIALHPVMGLMYWTDWGENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYW 660
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 15/129 (11%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C + L+ + C F
Sbjct: 1047 DILVFHSSRQDGLNDCMHNNGQCGQLCLAIPGGHRCGCASHHTLDPSSRNCSP---PTTF 1103
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+++ GL V+ + YD + IYW+D R N I
Sbjct: 1104 LLFSQKSAISRMIPD------DQHSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQN-I 1156
Query: 174 EVCDENGTN 182
+ ++GT
Sbjct: 1157 KRAKDDGTQ 1165
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 306 ASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTI 362
++I+VSG L +A A+D + G +Y WTD E + + G+ +
Sbjct: 196 STIVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAVQNV 243
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 244 VISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------D 292
Query: 423 GVPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 293 QPRAIALDPAHGYMYWTDWG 312
>gi|354459527|pdb|3P5B|L Chain L, The Structure Of The LdlrPCSK9 COMPLEX REVEALS THE
RECEPTOR IN AN Extended Conformation
Length = 400
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 139/273 (50%), Gaps = 46/273 (16%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
EC G CS+ C+ +G C CP G L C+D++EC+ P CSQ+C N +G Y
Sbjct: 2 ECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQR-RCEDIDECQDPDTCSQLCVNLEGGY 60
Query: 92 ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI------------LVADLE------- 132
C C EG+ L+ CKA+ S A+L +NRH + L+ +L
Sbjct: 61 KCQCEEGFQLDPHTKACKAVG-SIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDT 119
Query: 133 ----------------------EKGKDHRAQDIVVS-GLDLVEGLAYDWIGGHIYWLDSR 169
++ + D V+S + +GLA DWI +IYW DS
Sbjct: 120 EVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV 179
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L + V D G R L ++N ++PR +++DP G +++WTDWG +I++ G++G +
Sbjct: 180 LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHG--FMYWTDWGTPAKIKKGGLNGVDI 237
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
++++ I WPNG+TLD+ + R+Y+ DSKL I
Sbjct: 238 YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 270
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLD 200
+V + G+ D + G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 240 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF 299
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 300 EDK----VFWTD 307
>gi|301609344|ref|XP_002934223.1| PREDICTED: very low-density lipoprotein receptor [Xenopus
(Silurana) tropicalis]
Length = 868
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 158/338 (46%), Gaps = 59/338 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+++ KVC+ + DC + +DE C + EC+ G CS+ CH +G C C G L
Sbjct: 328 ECIDIAKVCNKQKDCKDWSDEPIKECYVNECEVNNGGCSHLCHNLVIGYECDCTAGFKLI 387
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ P CSQ+C N KG Y C C++GY ++ CKA+ LI +N
Sbjct: 388 -DRKTCGDIDECQNPEICSQICVNLKGGYKCECSKGYQMDPSTGVCKAVGREPC-LIFTN 445
Query: 123 RHSILVADLEEK---------------GKDHRAQDI------------------------ 143
R I LE K D + Q +
Sbjct: 446 RRDIRKVGLERKEYIQLVEQLRNTVALDADIKEQSLFWADTIQKAIFRAPFDTREKVGTH 505
Query: 144 --VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
VV + +A DWI +IYW+D+ L I V + +G+ R L + P + +DP
Sbjct: 506 IKVVEDVHSPSAIAIDWIYKNIYWMDTGLKTISVSNFDGSKRKTLFNSGLQDPTSIAVDP 565
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++W+DWGE +IE+ GM+G +R ++ + P+G+ +D+ R+Y+ DSKL
Sbjct: 566 ISG--FIYWSDWGEPAKIEKAGMNGIDRQQFVTADVQRPSGIAIDVVKSRLYWVDSKLHT 623
Query: 262 IDC------------KSLEIKTNVNYSTIFR-KLYWID 286
+ KS E + TIF ++YWID
Sbjct: 624 LSSVDLNGLDRRVILKSHEFLAHPLALTIFEDRVYWID 661
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 19/132 (14%)
Query: 278 IFRKLYWIDEGGNGVPLK-IGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKC 334
I++ +YW+D G LK I +N DGS L + L + ++A+D +G +Y
Sbjct: 523 IYKNIYWMDTG-----LKTISVSNFDGSKRKTLFNSGLQDPTSIAVDPISGFIY------ 571
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDF 394
W+DWGE +IE+ GM+G +R ++ + P+G+ +D+ R+Y+ DSKL +
Sbjct: 572 -----WSDWGEPAKIEKAGMNGIDRQQFVTADVQRPSGIAIDVVKSRLYWVDSKLHTLSS 626
Query: 395 CNYDGTGRQQVI 406
+ +G R+ ++
Sbjct: 627 VDLNGLDRRVIL 638
>gi|241780185|ref|XP_002400096.1| vitellogenin receptor, putative [Ixodes scapularis]
gi|215510680|gb|EEC20133.1| vitellogenin receptor, putative [Ixodes scapularis]
Length = 1200
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 182/424 (42%), Gaps = 102/424 (24%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
+ CV ++VCD DC + +DEG CD C G C++ C +P G C+C PG L
Sbjct: 588 SHECVPWSRVCDKHLDCMDASDEGSHCD-THCGKDNGGCAHICRESPTGPKCSCHPGYYL 646
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII- 120
+ D TC+D++EC++PG+CS CTNTKGS+ C+C EGY + D CKA + A+ L +
Sbjct: 647 TGDFKTCEDLDECQKPGHCSHFCTNTKGSFKCTCAEGYAIAADRQYCKAQSGEASLLYML 706
Query: 121 -----------SNRHSILVADLEE-KGKDHRAQDIVVSGLDLVEG--------------- 153
+H + DL + G D+ D + ++ EG
Sbjct: 707 PNQIRSFSMRGHAQHLLAQDDLADMHGLDYHFDDKAIYWTEMKEGTINVMLLAKKTPQTV 766
Query: 154 ---------LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+A DWI G+IY+ D ++ I+ CD + + + + + L + G
Sbjct: 767 LEDVHRPFHVAVDWIAGNIYFTDGWVH-IQACDYSFKHCADVLETTYSHVNSFTLAANHG 825
Query: 205 TRWLFWTDWGE-----NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
+FW W + + IER MDGS R ++S KI WP LT+D + +Y++DS
Sbjct: 826 I--MFWCVWSDVLGKSDGIIERSNMDGSGRVILVSDKILWPCSLTVDHVHKLLYWSDSNK 883
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
+ I+ A DG + +V G + +
Sbjct: 884 NVIE----------------------------------SATFDGKDRKTIVMGAISSPFS 909
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENP---------RIERIGMDGSNRSTI--ISTKIY 368
+ L WL+W DWG + R + + G ++T+ I +++
Sbjct: 910 IALYED-----------WLYWADWGSDSLMACNRHTGRDKSVVHHGDVKATVLKIVHQVH 958
Query: 369 WPNG 372
P+G
Sbjct: 959 QPSG 962
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 10/153 (6%)
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
FL + R IL D+ + I + + G+ +D ++YW+D+ IEVC
Sbjct: 22 FLSDNPREMILAVDMNT----YNVSTIREHHVGSIFGMDFDGQNRNLYWVDADKKTIEVC 77
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 236
NG+ I+L D + +P + L P G ++ G+ P I R MDG + + T
Sbjct: 78 RSNGSGHIILRSD-LRRPVDLALHPKAGVMYVLSA--GDTPSIVRYTMDGLSPIRVQLTS 134
Query: 237 IYWPNGLTLDIATRRVYFADS---KLDFIDCKS 266
+ L+ D+ R+++ DS ++FID K+
Sbjct: 135 MLLGLSLSTDLVAERLFWGDSVRATIEFIDLKN 167
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 105/470 (22%), Positives = 177/470 (37%), Gaps = 93/470 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNT-------------------- 43
+C+ +CDG DC G DE C A C K C NT
Sbjct: 499 QCIYEHDICDGYVDCHLGQDE-RNCTSAMCSSKEVFCINTKRCILEAWLCDGEDDCGDNM 557
Query: 44 ------CHPTPLG------ALC----------TCPPGEILSNDSVTCQDMNE----CEQP 77
CHPT A C C P + + + C D ++ C+
Sbjct: 558 DETLPRCHPTTTPSTTTTEAACWSDEFRCGSHECVPWSRVCDKHLDCMDASDEGSHCDTH 617
Query: 78 -----GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE 132
G C+ +C + CSC+ GY L D TC+ ++ S + +
Sbjct: 618 CGKDNGGCAHICRESPTGPKCSCHPGYYLTGDFKTCEDLDECQK----PGHCSHFCTNTK 673
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
K A+ ++ D A +Y L +++ + G + +LA+D++
Sbjct: 674 GSFKCTCAEGYAIAA-DRQYCKAQSGEASLLYMLPNQIRSFSM---RGHAQHLLAQDDLA 729
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
G LD + ++WT+ E I + + T++ ++ P + +D +
Sbjct: 730 DMHG--LDYHFDDKAIYWTEMKEG-TINVMLLAKKTPQTVLE-DVHRPFHVAVDWIAGNI 785
Query: 253 YFADSKLDFIDC--------KSLEIK-TNVNYSTIFRK------LYWIDEGGNGVPLKIG 297
YF D + C LE ++VN T+ W D G + I
Sbjct: 786 YFTDGWVHIQACDYSFKHCADVLETTYSHVNSFTLAANHGIMFWCVWSDVLGKSDGI-IE 844
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGS 357
++NMDGS ILVS ++ +L +++ + L+W+D +N IE DG
Sbjct: 845 RSNMDGSGRVILVSDKILWPCSLTVDH---------VHKLLYWSDSNKN-VIESATFDGK 894
Query: 358 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+R TI+ I P ++ + +Y+AD D + CN TGR + ++
Sbjct: 895 DRKTIVMGAISSP--FSIALYEDWLYWADWGSDSLMACNRH-TGRDKSVV 941
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 39/215 (18%)
Query: 242 GLTLDIATRRVYFADSKLDFI---DCKSLEIKT--NVNYSTIF--------RKLYWIDEG 288
+TLD AT+ ++ +D+ + I D + + T + +IF R LYW+D
Sbjct: 11 AMTLDWATQTLFLSDNPREMILAVDMNTYNVSTIREHHVGSIFGMDFDGQNRNLYWVD-- 68
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEA--LALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ +++ ++N G I++ L LAL + G++Y + G+
Sbjct: 69 ADKKTIEVCRSNGSGH---IILRSDLRRPVDLALHPKAGVMYVLSA-----------GDT 114
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS---KLDFIDFCNYDGTGRQ 403
P I R MDG + + T + L+ D+ R+++ DS ++FID N G
Sbjct: 115 PSIVRYTMDGLSPIRVQLTSMLLGLSLSTDLVAERLFWGDSVRATIEFIDLKN----GSS 170
Query: 404 QVILIDLMVEFTNDLMGDNGVPALALDLENGMLYY 438
+++ + + +G+ E+G LYY
Sbjct: 171 TPFIVEQIHGHITSVSASHGLVHWTT-REDGALYY 204
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 23 DEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQ 82
D PG C K G CS+ C P C CPP +LS ++VTC+D N G CS
Sbjct: 238 DYAPG----PCSVKNGGCSHVCLPALTSRSCLCPPRMVLSANNVTCKDEN-----GTCSA 288
Query: 83 MCTNTKGSYI 92
+ G+ I
Sbjct: 289 HELSCAGTCI 298
>gi|443735073|gb|ELU18928.1| hypothetical protein CAPTEDRAFT_62161, partial [Capitella teleta]
Length = 826
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 181/417 (43%), Gaps = 104/417 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGA--DEGPGCDLAECKHKFGLCSNTC-HPTPLGALCTCPPGEI 60
+C+ LT VCD DC A DE ++ CK G C++ C C C G
Sbjct: 277 KCIPLTSVCDKVPDCQPTASPDELVCKEVNPCKTNNGGCADKCIFNYNQQFHCECSAGFQ 336
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
L+ D+ TC D+NEC + G CSQ+C NT+GSY C C EGY+++ H CKA + L+
Sbjct: 337 LAPDNKTCIDVNECNEFGRCSQICVNTEGSYHCKCEEGYIMDPVLHYCKADGEEPS-LLF 395
Query: 121 SNR--------HS----ILVAD------------------------------LEEKGKDH 138
+NR HS LV D +E+
Sbjct: 396 ANRIDLREYRLHSGEKRALVEDTKSTIALDFDYANHILFWSDVSKEQINMTIIEDGEMQQ 455
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC----DENGTNRIVLAKDNITQP 194
Q ++ + +GLA+DW+ ++YW D+ N I V D + L N+ +P
Sbjct: 456 SKQTVITRHVRTPDGLAFDWVHRNLYWTDTGHNTISVVGINFDGEELHHKTLFNTNLDEP 515
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII-----STKIYWPNGLTLDIAT 249
R +++DP P W++W+DWGE +IE+ G+ G +R I+ ++ + WPNGLT+D T
Sbjct: 516 RAIVVDPRPKQGWMYWSDWGEPAKIEKAGLHGDSRKVIVQSGNTASHLEWPNGLTIDYTT 575
Query: 250 RRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL 309
R+Y+ D+KL IG N+ G + I+
Sbjct: 576 NRLYWVDAKLQV----------------------------------IGTCNLQGGDQRII 601
Query: 310 VSGQ--LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM-DGSNRSTII 363
+S L A+ + +Y W+DWG+ I R+ +G + ST +
Sbjct: 602 LSNSQFLKHPFAITVFEDFVY-----------WSDWGQE-SIHRVNKYNGQDVSTTL 646
>gi|355751894|gb|EHH56014.1| hypothetical protein EGM_05343, partial [Macaca fascicularis]
Length = 719
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 125/244 (51%), Gaps = 48/244 (19%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + LD
Sbjct: 70 QNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALD 129
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 130 PAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLS 187
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
FI +AN+DGS +V G L AL
Sbjct: 188 FIH----------------------------------RANLDGSFRQKVVEGSLTHPFAL 213
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L LY WTDW G R I+S +Y P + + R
Sbjct: 214 TLSGDTLY-----------WTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQER 261
Query: 381 RVYF 384
+ +F
Sbjct: 262 QPFF 265
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 148/339 (43%), Gaps = 61/339 (17%)
Query: 32 ECKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKG 89
C+ G CS+ C +P C CP G L ++ TC+ E+ ++ +
Sbjct: 268 RCEEDNGGCSHLCLLSPREPFYTCACPTGVQLQDNGRTCK--AGAEEVLLLARRTDLRRI 325
Query: 90 SYICSCNEGYVLEYDN-HTCKAINHSA----AFLIISNRHSILVADLEEKGKDHRAQDIV 144
S VL+ D+ AI++ + +I A L+ G AQ +V
Sbjct: 326 SLDTPDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSG----AQTLV 381
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ ++ +G+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR + L P G
Sbjct: 382 NTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIALHPVMG 441
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
++WTDWGENP+IE +DG R +++ + WPNGL LD+ ++Y+ D+K D
Sbjct: 442 L--MYWTDWGENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYWGDAKTD---- 495
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
KI N+DG+ L+ +L L
Sbjct: 496 ------------------------------KIEVINVDGTKRRTLLEDKLPHIFGFTLLG 525
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+Y WTDW + IER+ ++R II
Sbjct: 526 DFIY-----------WTDW-QRRSIERVHKVKASRDVII 552
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 86/144 (59%), Gaps = 17/144 (11%)
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRW 337
+KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 90 KKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY--------- 136
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI N
Sbjct: 137 --WTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANL 194
Query: 398 DGTGRQQVILIDLMVEFTNDLMGD 421
DG+ RQ+V+ L F L GD
Sbjct: 195 DGSFRQKVVEGSLTHPFALTLSGD 218
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 159/377 (42%), Gaps = 99/377 (26%)
Query: 49 LGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNH 106
L AL + ++LS + E G CS +C + + Y C+C G L+ +
Sbjct: 245 LSALYSPMDIQVLSQERQPFFHTRCEEDNGGCSHLCLLSPREPFYTCACPTGVQLQDNGR 304
Query: 107 TCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
TCKA + L+++ R
Sbjct: 305 TCKA--GAEEVLLLARR------------------------------------------- 319
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226
+ L RI + + T+ IVL D+I + DP G +++WTD E I R +DG
Sbjct: 320 -TDLRRISLDTPDFTD-IVLQVDDIRHAIAIDYDPLEG--YVYWTD-DEVRAIRRAYLDG 374
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWID 286
S T+++T+I P+G+ +D + R LYW D
Sbjct: 375 SGAQTLVNTEINDPDGIAVDW------------------------------VARNLYWTD 404
Query: 287 EGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWG 344
G + +I ++G++ ILVS L E A+AL G++Y WTDWG
Sbjct: 405 TGTD----RIEVTRLNGTSRKILVSEDLDEPRAIALHPVMGLMY-----------WTDWG 449
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
ENP+IE +DG R +++ + WPNGL LD+ ++Y+ D+K D I+ N DGT R+
Sbjct: 450 ENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYWGDAKTDKIEVINVDGTKRRT 509
Query: 405 VILIDLMVEFTNDLMGD 421
++ L F L+GD
Sbjct: 510 LLEDKLPHIFGFTLLGD 526
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 146/358 (40%), Gaps = 64/358 (17%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 146 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 205
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P +DI
Sbjct: 206 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGGKRKEILSA-LYSP----MDIQV 256
Query: 250 RRVYFADSKLDFIDCKSLEIKTNVNYSTIF--RKLYWIDEGGNGVPLKI-GKANMDGSNA 306
+ + F + E ++ + R+ ++ GV L+ G+ G+
Sbjct: 257 ----LSQERQPFFHTRCEEDNGGCSHLCLLSPREPFYTCACPTGVQLQDNGRTCKAGAEE 312
Query: 307 SILVSGQL-YEALALDLENGMLYYSTLKCTR------------WLFWTDWGENPRIERIG 353
+L++ + ++LD + + R +++WTD E I R
Sbjct: 313 VLLLARRTDLRRISLDTPDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTD-DEVRAIRRAY 371
Query: 354 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL--- 410
+DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 372 LDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEP 431
Query: 411 ---MVEFTNDLM-----GDN---------------------GVP-ALALDLENGMLYY 438
+ LM G+N G P LALDL+ G LY+
Sbjct: 432 RAIALHPVMGLMYWTDWGENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYW 489
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 53/139 (38%), Gaps = 23/139 (16%)
Query: 68 CQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL 127
C D N G CS +C T + C C G L D TC AFL+ ++R +I
Sbjct: 575 CADRN-----GGCSHLCFFTPHATRCGCPIGLELLSDMKTCIV---PEAFLVFTSRAAIH 626
Query: 128 VADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
LE D I ++G+ L +D HIYW D L ++ A
Sbjct: 627 RISLETNNND---VAIPLTGVKEASALDFDVSNNHIYWTDVSL------------KVAWA 671
Query: 188 KDNITQPRGMMLDPSPGTR 206
+ QP L P +R
Sbjct: 672 RRARRQPVWENLASVPASR 690
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 306 ASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTI 362
++I+VSG L +A A+D + G +Y WTD E + + G+ +
Sbjct: 25 STIVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAVQNV 72
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 73 VISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------D 121
Query: 423 GVPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 122 QPRAIALDPAHGYMYWTDWG 141
>gi|397517311|ref|XP_003828859.1| PREDICTED: low-density lipoprotein receptor-related protein 5 [Pan
paniscus]
Length = 1667
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 126/244 (51%), Gaps = 54/244 (22%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + LD
Sbjct: 158 QNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALD 217
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 218 PAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLS 275
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
FI +AN+DGS +V G L AL
Sbjct: 276 FIH----------------------------------RANLDGSFRQKVVEGSLTHPFAL 301
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L LY WTDW + + N+ T K P+ + L TR
Sbjct: 302 TLSGDTLY-----------WTDW------QTRSIHACNKRTGGKRK-ETPDSVQLLTKTR 343
Query: 381 RVYF 384
+ +F
Sbjct: 344 QAFF 347
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 138/330 (41%), Gaps = 89/330 (26%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL-------------- 118
E G CS +C + ++ Y C+C G L+ + TCKA L
Sbjct: 353 EDNGGCSHLCLLSPSEPFYTCACPTGVQLQDNGRTCKAGAEEVLLLARRTDLRRISLDTP 412
Query: 119 --------IISNRHSILV-----------ADLEEKGKDHR------AQDIVVSGLDLVEG 153
+ RH+I + D E + AQ +V + ++ +G
Sbjct: 413 DFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLVNTEINDPDG 472
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR + L P G ++WTDW
Sbjct: 473 IAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIALHPVMGL--MYWTDW 530
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
GENP+IE +DG R +++ + WPNGL LD+ ++Y+ D+K D
Sbjct: 531 GENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYWGDAKTD------------- 577
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
KI N+DG+ L+ +L L +Y
Sbjct: 578 ---------------------KIEVINVDGTKRRTLLEDKLPHIFGFTLLGDFIY----- 611
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ ++R II
Sbjct: 612 ------WTDW-QRRSIERVHKVKASRDVII 634
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 176 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 224
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 225 ----WTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 280
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 281 NLDGSFRQKVVEGSLTHPFALTLSGD 306
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 119/247 (48%), Gaps = 30/247 (12%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
C + G CS+ C TP C CP G E+LS DM C P +
Sbjct: 657 CADRNGGCSHLCFFTPHATRCGCPIGLELLS-------DMKTCIVPEAFLVFTSRAAIHR 709
Query: 92 ICSCNEGYVLEYDNHTCK----AINHSAAF-LIISNRHSILVADLEEKG------KDHRA 140
I LE +N+ + ++A +SN H I D+ K
Sbjct: 710 IS-------LETNNNDVAIPLTGVKEASALDFDVSNNH-IYWTDVSLKTISRAFMNGSSV 761
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ +V GLD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR + LD
Sbjct: 762 EHVVEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALD 821
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WT+WG PRI R MDG+N T++ K+ N LT+D A +R+Y+ D +
Sbjct: 822 PTKG--YIYWTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTN 878
Query: 261 FIDCKSL 267
I+ ++
Sbjct: 879 MIESSNM 885
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E ++
Sbjct: 707 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVVE 766
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 767 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 822
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 823 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 870
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ N G+++V++ D
Sbjct: 871 YWTDLDTNMIESSNM--LGQERVVIAD 895
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 138/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C F
Sbjct: 943 DILVFHSSRQDGLNDCMHNNGQCGQLCLAIPGGHRCGCASHYTLDPSSRNCSP---PTTF 999
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+++ GL V+ + YD + IYW+D R N I
Sbjct: 1000 LLFSQKSAISRMIPD------DQHSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQN-I 1052
Query: 174 EVCDENGTNRIVL-----AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT VL ++ QP + +D +R LFWT N I + G
Sbjct: 1053 KRAKDDGTQPFVLTSLSQGQNPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLSGEA 1109
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1110 MGVVLRGDRDKPRAIVVNAERGYLYFTNMQ---------------------------DRA 1142
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A +DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1143 A-----KIERAALDGTEREVLFTTGLIRPVALVVDNTLGK---------LFWVD-ADLKR 1187
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT + + +Y+ D + I+
Sbjct: 1188 IESCDLSGANRLTLEDANIVQPLGLT--VLGKHLYWIDRQQQMIE 1230
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 146/369 (39%), Gaps = 92/369 (24%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 234 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 293
Query: 190 NITQPRGMMLDPSPGTRWLFWTDW----------------GENP---------------- 217
++T P + L L+WTDW E P
Sbjct: 294 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGGKRKETPDSVQLLTKTRQAFFHT 349
Query: 218 RIERIGMDGSNRSTIISTKIYW----PNGLTLD--------------IATRRVYFADSKL 259
R E S+ + ++ ++ P G+ L + RR L
Sbjct: 350 RCEEDNGGCSHLCLLSPSEPFYTCACPTGVQLQDNGRTCKAGAEEVLLLARRTDLRRISL 409
Query: 260 DFIDCKSLEIKTN-------VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
D D + ++ + ++Y + +YW D+ I +A +DGS A LV+
Sbjct: 410 DTPDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEVRA----IRRAYLDGSGAQTLVNT 465
Query: 313 QL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 370
++ + +A+D R L+WTD G + RIE ++G++R ++S + P
Sbjct: 466 EINDPDGIAVDW-----------VARNLYWTDTGTD-RIEVTRLNGTSRKILVSEDLDEP 513
Query: 371 NGLTLDIATRRVYFAD-SKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALAL 429
+ L +Y+ D + I+ N DG R+ +L++ + + N LAL
Sbjct: 514 RAIALHPVMGLMYWTDWGENPKIECANLDGQERR--VLVNASLGWPN---------GLAL 562
Query: 430 DLENGMLYY 438
DL+ G LY+
Sbjct: 563 DLQEGKLYW 571
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N +L +N A +E D ++++ +GL L
Sbjct: 1111 GVVLRGDRDKPRAIVVNAERGYLYFTNMQD-RAAKIERAALDGTEREVLFTTGLIRPVAL 1169
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + + L+W D
Sbjct: 1170 VVDNTLGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPLGLTV----LGKHLYWID-R 1224
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T I ++ G+
Sbjct: 1225 QQQMIERVEKTTGDKRTRIQGRVAHLTGI 1253
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 306 ASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTI 362
++I+VSG L +A A+D + G +Y WTD E + + G+ +
Sbjct: 113 STIVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAVQNV 160
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 161 VISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------D 209
Query: 423 GVPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 210 QPRAIALDPAHGYMYWTDWG 229
>gi|326920238|ref|XP_003206381.1| PREDICTED: low-density lipoprotein receptor-related protein 5-like
[Meleagris gallopavo]
Length = 1640
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 124/245 (50%), Gaps = 48/245 (19%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
Q++++SGL +GLA DWIG +YW DS NRIEV + NGT+R VL ++ QPR + L
Sbjct: 129 VQNVIISGLVSPDGLACDWIGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIAL 188
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP+ G +++WTDWGE PRIER GMD S R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 189 DPAHG--YMYWTDWGETPRIERAGMDSSTRKIIVDSDIYWPNGLTIDLDEQKLYWADAKL 246
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
FI +AN+DGS +V G L A
Sbjct: 247 SFIH----------------------------------RANLDGSFRQKVVEGSLTHPFA 272
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L L LY WTDW G R I+S +Y P + +
Sbjct: 273 LTLSGDTLY-----------WTDWQTRSIHACNKRTGEKRREILSA-LYSPMDIQVLSPD 320
Query: 380 RRVYF 384
R+ YF
Sbjct: 321 RQPYF 325
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 155/338 (45%), Gaps = 61/338 (18%)
Query: 33 CKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C+ G CS+ C +P C CP G L +D TC+ + E+ ++ + S
Sbjct: 329 CEENNGGCSHLCLLSPRDPFYSCACPTGVQLEDDGRTCK--SGAEEVLLLARRTDLRRIS 386
Query: 91 YICSCNEGYVLEYDN-HTCKAINHSAA----FLIISNRHSILVADLEEKGKDHRAQDIVV 145
+L+ DN AI++ + + +I A L+ G AQ +V
Sbjct: 387 LDMPDFTDIILQIDNIRHAIAIDYDPVEGYIYWTDDDVRAIRRAYLDGSG----AQTLVT 442
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+ ++ +G+A DW+ ++YW D+ +RIEV NGT+R +L +N+ +PR ++L+P G
Sbjct: 443 TEINHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILISENLDEPRAIVLNPVMG- 501
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+++WTDWGE+P+IE +DGS R +++T + WPNGL LD+ ++Y+ D+K D
Sbjct: 502 -YMYWTDWGESPKIECAYLDGSERRVLVNTSLGWPNGLALDLEEDKLYWGDAKTD----- 555
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
KI N+DG+ L+ +L L
Sbjct: 556 -----------------------------KIEVINVDGTMRKTLLEDKLPHIFGFTLLGD 586
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+Y WTDW + IER+ ++R II
Sbjct: 587 YIY-----------WTDW-QRRSIERVHKIRASRDIII 612
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 86/146 (58%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
I +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 148 IGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 196
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMD S R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 197 ----WTDWGETPRIERAGMDSSTRKIIVDSDIYWPNGLTIDLDEQKLYWADAKLSFIHRA 252
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 253 NLDGSFRQKVVEGSLTHPFALTLSGD 278
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 148/349 (42%), Gaps = 95/349 (27%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE 132
E G CS +C + Y C+C G LE D TCK+ + L+++ R
Sbjct: 331 ENNGGCSHLCLLSPRDPFYSCACPTGVQLEDDGRTCKS--GAEEVLLLARR--------- 379
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
+ L RI + D I+L DNI
Sbjct: 380 -----------------------------------TDLRRISL-DMPDFTDIILQIDNIR 403
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
+ DP G +++WTD + I R +DGS T+++T+I P+G+ +D
Sbjct: 404 HAIAIDYDPVEG--YIYWTD-DDVRAIRRAYLDGSGAQTLVTTEINHPDGIAVDW----- 455
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+ R LYW D G + +I ++G++ IL+S
Sbjct: 456 -------------------------VARNLYWTDTGTD----RIEVTRLNGTSRKILISE 486
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
L E A+ L M Y ++WTDWGE+P+IE +DGS R +++T + WPNG
Sbjct: 487 NLDEPRAIVLNPVMGY---------MYWTDWGESPKIECAYLDGSERRVLVNTSLGWPNG 537
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
L LD+ ++Y+ D+K D I+ N DGT R+ ++ L F L+GD
Sbjct: 538 LALDLEEDKLYWGDAKTDKIEVINVDGTMRKTLLEDKLPHIFGFTLLGD 586
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 107/237 (45%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E G CS +C T C+C G L D TC AFL+ ++R +I
Sbjct: 633 NPCAENNGGCSHLCFFTPQETRCACPIGLELLSDMKTCII---PEAFLVFTSRAAIHRIS 689
Query: 131 LEEKGKD----------------------------------------HRAQDIVVSGLDL 150
LE D + ++ GLD
Sbjct: 690 LETNNNDVAIPLTGVKEASALDFDVSDNRIYWTDVSLKTISRAFMNGSSVEHVIEFGLDY 749
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR + LDP+ G +++W
Sbjct: 750 PEGMAVDWMGKNLYWADTGTNRIEVARLDGQYRQVLVWKDLDNPRSLALDPTKG--YMYW 807
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG PRI R MDG+N T++ K+ N LT+D A +R+Y+ D I+ ++
Sbjct: 808 TEWGGKPRIVRAYMDGTNSITLVD-KVGRANDLTIDYADQRLYWTDLDTSMIESSNM 863
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 140/351 (39%), Gaps = 100/351 (28%)
Query: 59 EILSNDSVTCQDMNECEQP-GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C Q G+C +C + C C Y L+ ++ C + +F
Sbjct: 921 DILVFHSSRQDGLNDCVQNNGHCGHLCLAIPNGFRCGCAAHYTLDPNSRNCSS---PTSF 977
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D ++ DI++ GL V+ + YD + IYW+D R N I
Sbjct: 978 LLFSQKSAISRMIPD------DQQSPDIILPMHGLRNVKAIDYDPLDKLIYWVDGRQNII 1031
Query: 174 EVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
+ AKD+ TQP +M P + +NP +
Sbjct: 1032 K-----------RAKDDGTQPFTVMSSP----------NQSQNPEKQ------------- 1057
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
P+ L++DI + LYW E N V
Sbjct: 1058 ------PHDLSIDIYSH------------------------------TLYWTCEATNSVN 1081
Query: 294 LKIGKANMDGSNASILVSGQ--LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
+ ++G + +++ G A+ ++ E G +Y++ ++ P+IER
Sbjct: 1082 VH----RLNGESIGMVLRGDHDKPRAIVVNAERGYMYFTNMQ----------ERAPKIER 1127
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
+DG+ R + +T + P L +D ++++ D+ L I+ C+ G R
Sbjct: 1128 AALDGTEREVLFTTGLIRPVALVIDNKLGKLFWVDADLKRIESCDLSGANR 1178
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 100/212 (47%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ R+Y+ D L F++ S+E I+
Sbjct: 685 IHRISLETNNNDVAIPLTGVKEASALDFDVSDNRIYWTDVSLKTISRAFMNGSSVEHVIE 744
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 745 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQYRQVLVWKDLDNPRSLALDP 800
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 801 TKGYMY-----------WTEWGGKPRIVRAYMDGTNSITLVD-KVGRANDLTIDYADQRL 848
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D I+ N G R ++I DL F
Sbjct: 849 YWTDLDTSMIESSNMLGQER-EIIADDLPHPF 879
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 127/292 (43%), Gaps = 29/292 (9%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 206 IERAGMDSSTRKIIVDSDIYWPNGLTIDLDEQKLYWADAKLSFIHRANLDGSFRQKVVEG 265
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 266 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGEKRREILSA-LYSPMDIQVLSPD 320
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK-IGKANMDGSNAS 307
R+ YF + + C L + + R ++ GV L+ G+ G+
Sbjct: 321 RQPYFHTPCEENNGGCSHLCLLSP-------RDPFYSCACPTGVQLEDDGRTCKSGAEEV 373
Query: 308 ILVSGQL-YEALALDLENGMLYYSTLKCTR------------WLFWTDWGENPRIERIGM 354
+L++ + ++LD+ + + R +++WTD + I R +
Sbjct: 374 LLLARRTDLRRISLDMPDFTDIILQIDNIRHAIAIDYDPVEGYIYWTD-DDVRAIRRAYL 432
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ +I
Sbjct: 433 DGSGAQTLVTTEINHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILI 484
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D+ +AI N ++ +N +E D ++++ +GL L
Sbjct: 1091 GMVLRGDHDKPRAIVVNAERGYMYFTNMQE-RAPKIERAALDGTEREVLFTTGLIRPVAL 1149
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + L+W D
Sbjct: 1150 VIDNKLGKLFWVDADLKRIESCDLSGANRVTLEDSNILQPMGLTV----LGNHLYWID-R 1204
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ + T I +I G+
Sbjct: 1205 QQQMIERVEKTNGYKRTRIQGRIAHLTGI 1233
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 22/138 (15%)
Query: 306 ASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTIIS 364
++++VSG L +A A+D + Y + +FWTD E + I G+ +I
Sbjct: 85 STVVVSG-LEDAAAVDFQ----YSQGI-----VFWTDVSEEAIKQTYINQTGNVVQNVII 134
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGV 424
+ + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 135 SGLVSPDGLACDWIGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------DQP 183
Query: 425 PALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 184 RAIALDPAHGYMYWTDWG 201
>gi|61097991|ref|NP_001012915.1| low-density lipoprotein receptor-related protein 5 precursor
[Gallus gallus]
gi|53131013|emb|CAG31784.1| hypothetical protein RCJMB04_11b2 [Gallus gallus]
Length = 1616
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 124/245 (50%), Gaps = 48/245 (19%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
Q++++SGL +GLA DWIG +YW DS NRIEV + NGT+R VL ++ QPR + L
Sbjct: 98 VQNVIISGLVSPDGLACDWIGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIAL 157
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP+ G +++WTDWGE PRIER GMD S R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 158 DPAHG--YMYWTDWGETPRIERAGMDSSTRKIIVDSDIYWPNGLTIDLDEQKLYWADAKL 215
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
FI +AN+DGS +V G L A
Sbjct: 216 SFIH----------------------------------RANLDGSFRQKVVEGSLTHPFA 241
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L L LY WTDW G R I+S +Y P + +
Sbjct: 242 LTLSGDTLY-----------WTDWQTRSIHACNKRTGEKRREILSA-LYSPMDIQVLSPD 289
Query: 380 RRVYF 384
R+ YF
Sbjct: 290 RQPYF 294
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 155/338 (45%), Gaps = 61/338 (18%)
Query: 33 CKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C+ G CS+ C +P C CP G L +D TC+ + E+ ++ + S
Sbjct: 298 CEENNGGCSHLCLLSPRDPFYSCACPTGVQLEDDGRTCK--SGAEEVLLLARRTDLRRIS 355
Query: 91 YICSCNEGYVLEYDN-HTCKAINHSAA----FLIISNRHSILVADLEEKGKDHRAQDIVV 145
+L+ DN AI++ + + +I A L+ G AQ +V
Sbjct: 356 LDMPDFTDIILQIDNIRHAIAIDYDPVEGYIYWTDDDVRAIRRAYLDGSG----AQTLVT 411
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+ ++ +G+A DW+ ++YW D+ +RIEV NGT+R +L +N+ +PR ++L+P G
Sbjct: 412 TEINHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILISENLDEPRAIVLNPVMG- 470
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+++WTDWGE+P+IE +DGS R +++T + WPNGL LD+ ++Y+ D+K D
Sbjct: 471 -YMYWTDWGESPKIECAYLDGSERRVLVNTSLGWPNGLALDLEEDKLYWGDAKTD----- 524
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
KI N+DG+ L+ +L L
Sbjct: 525 -----------------------------KIEVINVDGTMRKTLLEDKLPHIFGFTLLGD 555
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+Y WTDW + IER+ ++R II
Sbjct: 556 YIY-----------WTDW-QRRSIERVHKIRASRDIII 581
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 86/146 (58%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
I +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 117 IGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 165
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMD S R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 166 ----WTDWGETPRIERAGMDSSTRKIIVDSDIYWPNGLTIDLDEQKLYWADAKLSFIHRA 221
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 222 NLDGSFRQKVVEGSLTHPFALTLSGD 247
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 148/349 (42%), Gaps = 95/349 (27%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE 132
E G CS +C + Y C+C G LE D TCK+ + L+++ R
Sbjct: 300 ENNGGCSHLCLLSPRDPFYSCACPTGVQLEDDGRTCKS--GAEEVLLLARR--------- 348
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
+ L RI + D I+L DNI
Sbjct: 349 -----------------------------------TDLRRISL-DMPDFTDIILQIDNIR 372
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
+ DP G +++WTD + I R +DGS T+++T+I P+G+ +D
Sbjct: 373 HAIAIDYDPVEG--YIYWTD-DDVRAIRRAYLDGSGAQTLVTTEINHPDGIAVDW----- 424
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+ R LYW D G + +I ++G++ IL+S
Sbjct: 425 -------------------------VARNLYWTDTGTD----RIEVTRLNGTSRKILISE 455
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
L E A+ L M Y ++WTDWGE+P+IE +DGS R +++T + WPNG
Sbjct: 456 NLDEPRAIVLNPVMGY---------MYWTDWGESPKIECAYLDGSERRVLVNTSLGWPNG 506
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
L LD+ ++Y+ D+K D I+ N DGT R+ ++ L F L+GD
Sbjct: 507 LALDLEEDKLYWGDAKTDKIEVINVDGTMRKTLLEDKLPHIFGFTLLGD 555
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 107/237 (45%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E G CS +C T C+C G L D TC AFL+ ++R +I
Sbjct: 602 NPCAENNGGCSHLCFFTPQETRCACPIGLELLSDMKTCII---PEAFLVFTSRAAIHRIS 658
Query: 131 LEEKGKD----------------------------------------HRAQDIVVSGLDL 150
LE D + ++ GLD
Sbjct: 659 LETNNNDVAIPLTGVKEASALDFDVSDNRIYWTDVSLKTISRAFMNGSSVEHVIEFGLDY 718
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR + LDP+ G +++W
Sbjct: 719 PEGMAVDWMGKNLYWADTGTNRIEVARLDGQYRQVLVWKDLDNPRSLALDPTKG--YMYW 776
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG PRI R MDG+N T++ K+ N LT+D A +R+Y+ D I+ ++
Sbjct: 777 TEWGGKPRIVRAYMDGTNSITLVD-KVGRANDLTIDYADQRLYWTDLDTSMIESSNM 832
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 140/351 (39%), Gaps = 100/351 (28%)
Query: 59 EILSNDSVTCQDMNECEQP-GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C Q G+C +C + C C Y L+ ++ C + +F
Sbjct: 890 DILVFHSSRQDGLNDCVQNNGHCGHLCLAIPNGFRCGCAAHYTLDPNSRNCSS---PTSF 946
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D ++ DI++ GL V+ + YD + IYW+D R N I
Sbjct: 947 LLFSQKSAISRMIPD------DQQSPDIILPMHGLRNVKAIDYDPLDKLIYWVDGRQNII 1000
Query: 174 EVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
+ AKD+ TQP +M P + +NP +
Sbjct: 1001 K-----------RAKDDGTQPFTVMSSP----------NQSQNPEKQ------------- 1026
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
P+ L++DI + LYW E N V
Sbjct: 1027 ------PHDLSIDIYSH------------------------------TLYWTCEATNSVN 1050
Query: 294 LKIGKANMDGSNASILVSGQ--LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
+ ++G + +++ G A+ ++ E G +Y++ ++ P+IER
Sbjct: 1051 VH----RLNGESIGMVLRGDHDKPRAIVVNAERGYMYFTNMQ----------ERAPKIER 1096
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
+DG+ R + +T + P L +D ++++ D+ L I+ C+ G R
Sbjct: 1097 AALDGTEREVLFTTGLIRPVALVIDNKLGKLFWVDADLKRIESCDLSGANR 1147
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 100/212 (47%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ R+Y+ D L F++ S+E I+
Sbjct: 654 IHRISLETNNNDVAIPLTGVKEASALDFDVSDNRIYWTDVSLKTISRAFMNGSSVEHVIE 713
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 714 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQYRQVLVWKDLDNPRSLALDP 769
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 770 TKGYMY-----------WTEWGGKPRIVRAYMDGTNSITLVD-KVGRANDLTIDYADQRL 817
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D I+ N G R ++I DL F
Sbjct: 818 YWTDLDTSMIESSNMLGQER-EIIADDLPHPF 848
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 127/292 (43%), Gaps = 29/292 (9%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 175 IERAGMDSSTRKIIVDSDIYWPNGLTIDLDEQKLYWADAKLSFIHRANLDGSFRQKVVEG 234
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 235 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGEKRREILSA-LYSPMDIQVLSPD 289
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK-IGKANMDGSNAS 307
R+ YF + + C L + + R ++ GV L+ G+ G+
Sbjct: 290 RQPYFHTPCEENNGGCSHLCLLSP-------RDPFYSCACPTGVQLEDDGRTCKSGAEEV 342
Query: 308 ILVSGQL-YEALALDLENGMLYYSTLKCTR------------WLFWTDWGENPRIERIGM 354
+L++ + ++LD+ + + R +++WTD + I R +
Sbjct: 343 LLLARRTDLRRISLDMPDFTDIILQIDNIRHAIAIDYDPVEGYIYWTD-DDVRAIRRAYL 401
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ +I
Sbjct: 402 DGSGAQTLVTTEINHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILI 453
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D+ +AI N ++ +N +E D ++++ +GL L
Sbjct: 1060 GMVLRGDHDKPRAIVVNAERGYMYFTNMQE-RAPKIERAALDGTEREVLFTTGLIRPVAL 1118
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + L+W D
Sbjct: 1119 VIDNKLGKLFWVDADLKRIESCDLSGANRVTLEDSNILQPMGLTV----LGNHLYWID-R 1173
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ + T I +I G+
Sbjct: 1174 QQQMIERVEKTNGYKRTRIQGRIAHLTGI 1202
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 22/138 (15%)
Query: 306 ASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTIIS 364
++++VSG L +A A+D + Y + +FWTD E + I G+ +I
Sbjct: 54 STVVVSG-LEDAAAVDFQ----YSQGI-----VFWTDVSEEAIKQTYINQTGNVVQNVII 103
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGV 424
+ + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 104 SGLVSPDGLACDWIGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------DQP 152
Query: 425 PALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 153 RAIALDPAHGYMYWTDWG 170
>gi|3831750|gb|AAC70183.1| LDL receptor member LR3 [Mus musculus]
Length = 1614
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 134/275 (48%), Gaps = 55/275 (20%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ+IV+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + L
Sbjct: 98 AQNIVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIAL 157
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 158 DPAHG--YMYWTDWGEAPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKL 215
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
FI AN+DGS +V G L A
Sbjct: 216 SFIH----------------------------------HANLDGSFRQKVVEGSLTHPFA 241
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L L LY WTDW G R I+S +Y P +DI
Sbjct: 242 LTLSGDTLY-----------WTDWQTRSIHACNKWTGEQRKEILSA-LYSP----MDI-- 283
Query: 380 RRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
+V + + F C D G + L+ F
Sbjct: 284 -QVLSQERQPPFHTPCEEDNGGCSHLCLLSPREPF 317
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 150/338 (44%), Gaps = 61/338 (18%)
Query: 33 CKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C+ G CS+ C +P C CP G L ++ TC+ E+ ++ + S
Sbjct: 298 CEEDNGGCSHLCLLSPREPFYSCACPTGVQLQDNGKTCK--TGAEEVLLLARRTDLRRIS 355
Query: 91 YICSCNEGYVLEY-DNHTCKAINHSA----AFLIISNRHSILVADLEEKGKDHRAQDIVV 145
VL+ D AI++ + +I A L+ G AQ +V
Sbjct: 356 LDTPDFTDIVLQVGDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSG----AQTLVN 411
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+ ++ +G+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR ++L P G
Sbjct: 412 TEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGL 471
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
++WTDWGENP+IE +DG +R +++T + WPNGL LD+ ++Y+ D+K D
Sbjct: 472 --MYWTDWGENPKIECANLDGRDRHVLVNTSLGWPNGLALDLQEGKLYWGDAKTD----- 524
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
KI N+DG+ L+ +L L
Sbjct: 525 -----------------------------KIEVINIDGTKRKTLLEDKLPHIFGFTLLGD 555
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+Y WTDW + IER+ ++R II
Sbjct: 556 FIY-----------WTDW-QRRSIERVHKVKASRDVII 581
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 117 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 165
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 166 ----WTDWGEAPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHHA 221
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 222 NLDGSFRQKVVEGSLTHPFALTLSGD 247
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 122/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL +I + DP G +++WTD E I R +DGS
Sbjct: 351 LRRISLDTPDFTD-IVLQVGDIRHAIAIDYDPLEG--YVYWTD-DEVRAIRRAYLDGSGA 406
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
T+++T+I P+G+ +D + R LYW D G
Sbjct: 407 QTLVNTEINDPDGIAVDW------------------------------VARNLYWTDTGT 436
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G++ ILVS L E A+ L M ++WTDWGENP+I
Sbjct: 437 D----RIEVTRLNGTSRKILVSEDLDEPRAIVLHPVM---------GLMYWTDWGENPKI 483
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
E +DG +R +++T + WPNGL LD+ ++Y+ D+K D I+ N DGT R+ ++
Sbjct: 484 ECANLDGRDRHVLVNTSLGWPNGLALDLQEGKLYWGDAKTDKIEVINIDGTKRKTLLEDK 543
Query: 410 LMVEFTNDLMGD 421
L F L+GD
Sbjct: 544 LPHIFGFTLLGD 555
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 105/230 (45%), Gaps = 46/230 (20%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C T + C C G L D TC AFL+ ++R +I LE D
Sbjct: 609 GGCSHLCFFTPRATKCGCPIGLELLSDMKTCII---PEAFLVFTSRATIHRISLETNNND 665
Query: 138 ----------------------------------------HRAQDIVVSGLDLVEGLAYD 157
+ ++ GLD EG+A D
Sbjct: 666 VAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIEFGLDYPEGMAVD 725
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP 217
W+G ++YW D+ NRIEV +G R VL ++ PR + LDP+ G +++WT+WG P
Sbjct: 726 WMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTKG--YIYWTEWGGKP 783
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
RI R MDG+N T++ K+ N LT+D A +R+Y+ D + I+ ++
Sbjct: 784 RIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTNMIESSNM 832
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 141/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C + F
Sbjct: 890 DILVFHSSRQDGLNDCVHSNGQCGQLCLAIPGGHRCGCASHYTLDPSSRNCSP---PSTF 946
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+V+ GL V+ + YD + IYW+D R N I
Sbjct: 947 LLFSQKFAISRMIPD------DQLSPDLVLPLHGLRNVKAINYDPLDKFIYWVDGRQN-I 999
Query: 174 EVCDENGTNRIVLAKDNIT-----QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT +L + + QP + +D +R LFWT N I +DG
Sbjct: 1000 KRAKDDGTQPSMLTSPSQSLSPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLDGDA 1056
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1057 MGVVLRGDRDKPRAIAVNAERGYMYFTNMQ---------------------------DHA 1089
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A++DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1090 A-----KIERASLDGTEREVLFTTGLIRPVALVVDNALGK---------LFWVD-ADLKR 1134
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT + R +Y+ D + I+
Sbjct: 1135 IESCDLSGANRLTLEDANIVQPVGLT--VLGRHLYWIDRQQQMIE 1177
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 99/212 (46%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E I+
Sbjct: 654 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIE 713
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 714 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 769
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 770 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 817
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R VI DL F
Sbjct: 818 YWTDLDTNMIESSNMLGQER-MVIADDLPYPF 848
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 149/366 (40%), Gaps = 80/366 (21%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 175 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHHANLDGSFRQKVVEG 234
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 235 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKWTGEQRKEILSA-LYSPMDIQVLSQE 289
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI-GKANMDGSNAS 307
R+ F + D C L + + R+ ++ GV L+ GK G+
Sbjct: 290 RQPPFHTPCEEDNGGCSHLCLLSP-------REPFYSCACPTGVQLQDNGKTCKTGAEEV 342
Query: 308 ILVS----------------------GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
+L++ G + A+A+D Y L+ +++WTD E
Sbjct: 343 LLLARRTDLRRISLDTPDFTDIVLQVGDIRHAIAID-------YDPLE--GYVYWTD-DE 392
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
I R +DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ +
Sbjct: 393 VRAIRRAYLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKIL 452
Query: 406 ILIDL------MVEFTNDLM-----GDN---------------------GVP-ALALDLE 432
+ DL ++ LM G+N G P LALDL+
Sbjct: 453 VSEDLDEPRAIVLHPVMGLMYWTDWGENPKIECANLDGRDRHVLVNTSLGWPNGLALDLQ 512
Query: 433 NGMLYY 438
G LY+
Sbjct: 513 EGKLYW 518
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 34/216 (15%)
Query: 208 LFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC-- 264
++WTD E + + G+ I+ + + P+GL D +++Y+ DS+ + I+
Sbjct: 76 VYWTDVSEEAIKQTYLNQTGAAAQNIVISGLVSPDGLACDWVGKKLYWTDSETNRIEVAN 135
Query: 265 -----------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+ L+ + +YW D G +I +A MDGS I+V
Sbjct: 136 LNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGEAP---RIERAGMDGSTRKIIVDSD 192
Query: 314 LY--EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
+Y L +DLE LY++ K + I +DGS R ++ + P
Sbjct: 193 IYWPNGLTIDLEEQKLYWADAKLS------------FIHHANLDGSFRQKVVEGSLTHPF 240
Query: 372 GLTLDIATRRVYFADSKLDFIDFCN-YDGTGRQQVI 406
LTL T +Y+ D + I CN + G R++++
Sbjct: 241 ALTLSGDT--LYWTDWQTRSIHACNKWTGEQRKEIL 274
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N ++ +N A +E D ++++ +GL L
Sbjct: 1058 GVVLRGDRDKPRAIAVNAERGYMYFTNMQD-HAAKIERASLDGTEREVLFTTGLIRPVAL 1116
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + R L+W D
Sbjct: 1117 VVDNALGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPVGLTV----LGRHLYWID-R 1171
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T + ++ G+
Sbjct: 1172 QQQMIERVEKTTGDKRTRVQGRVTHLTGI 1200
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 25/139 (17%)
Query: 307 SILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTII 363
S +V+ L +A A+D + G +Y WTD E + + G+ I+
Sbjct: 54 STIVASGLEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAAQNIV 102
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNG 423
+ + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 103 ISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------DQ 151
Query: 424 VPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 152 PRAIALDPAHGYMYWTDWG 170
>gi|355566225|gb|EHH22604.1| hypothetical protein EGK_05910, partial [Macaca mulatta]
Length = 978
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 125/245 (51%), Gaps = 48/245 (19%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + L
Sbjct: 69 VQNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIAL 128
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 129 DPAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKL 186
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
FI +AN+DGS +V G L A
Sbjct: 187 SFIH----------------------------------RANLDGSFRQKVVEGSLTHPFA 212
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L L LY WTDW G R I+S +Y P + +
Sbjct: 213 LTLSGDTLY-----------WTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQE 260
Query: 380 RRVYF 384
R+ +F
Sbjct: 261 RQPFF 265
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 148/339 (43%), Gaps = 61/339 (17%)
Query: 32 ECKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKG 89
C+ G CS+ C +P C CP G L ++ TC+ E+ ++ +
Sbjct: 268 RCEEDNGGCSHLCLLSPREPFYTCACPTGVQLQDNGRTCK--AGAEEVLLLARRTDLRRI 325
Query: 90 SYICSCNEGYVLEYDN-HTCKAINHSA----AFLIISNRHSILVADLEEKGKDHRAQDIV 144
S VL+ D+ AI++ + +I A L+ G AQ +V
Sbjct: 326 SLDTPDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSG----AQTLV 381
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ ++ +G+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR + L P G
Sbjct: 382 NTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIALHPVMG 441
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
++WTDWGENP+IE +DG R +++ + WPNGL LD+ ++Y+ D+K D
Sbjct: 442 L--MYWTDWGENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYWGDAKTD---- 495
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
KI N+DG+ L+ +L L
Sbjct: 496 ------------------------------KIEVINVDGTKRRTLLEDKLPHIFGFTLLG 525
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+Y WTDW + IER+ ++R II
Sbjct: 526 DFIY-----------WTDW-QRRSIERVHKVKASRDVII 552
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 88 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 136
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 137 ----WTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 192
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 193 NLDGSFRQKVVEGSLTHPFALTLSGD 218
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 159/377 (42%), Gaps = 99/377 (26%)
Query: 49 LGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNH 106
L AL + ++LS + E G CS +C + + Y C+C G L+ +
Sbjct: 245 LSALYSPMDIQVLSQERQPFFHTRCEEDNGGCSHLCLLSPREPFYTCACPTGVQLQDNGR 304
Query: 107 TCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
TCKA + L+++ R
Sbjct: 305 TCKA--GAEEVLLLARR------------------------------------------- 319
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226
+ L RI + + T+ IVL D+I + DP G +++WTD E I R +DG
Sbjct: 320 -TDLRRISLDTPDFTD-IVLQVDDIRHAIAIDYDPLEG--YVYWTD-DEVRAIRRAYLDG 374
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWID 286
S T+++T+I P+G+ +D + R LYW D
Sbjct: 375 SGAQTLVNTEINDPDGIAVDW------------------------------VARNLYWTD 404
Query: 287 EGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWG 344
G + +I ++G++ ILVS L E A+AL G++Y WTDWG
Sbjct: 405 TGTD----RIEVTRLNGTSRKILVSEDLDEPRAIALHPVMGLMY-----------WTDWG 449
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
ENP+IE +DG R +++ + WPNGL LD+ ++Y+ D+K D I+ N DGT R+
Sbjct: 450 ENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYWGDAKTDKIEVINVDGTKRRT 509
Query: 405 VILIDLMVEFTNDLMGD 421
++ L F L+GD
Sbjct: 510 LLEDKLPHIFGFTLLGD 526
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 96/240 (40%), Gaps = 52/240 (21%)
Query: 68 CQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL 127
C D N G CS +C T + C C G L D TC AFL+ ++R +I
Sbjct: 575 CADRN-----GGCSHLCFFTPHATRCGCPIGLELLSDMKTCIV---PEAFLVFTSRAAIH 626
Query: 128 VADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD--------SRLNRIEVCDEN 179
LE D I ++G+ L +D HIYW D R R V +
Sbjct: 627 RISLETNNND---VAIPLTGVKEASALDFDVSNNHIYWTDVSLKVAWARRARRQSVWENL 683
Query: 180 GTNRIVLAKDNITQP-----------RGMMLDP--------------SPG-------TRW 207
+ A D + R + L P SP + +
Sbjct: 684 ASVPAARASDTFLKALSYLFIYLFLRRSLALSPGLWPSDHPWRDMLDSPSRPFSLVPSSY 743
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
++WT+WG PRI R MDG+N T++ K+ N LT+D A +R+Y+ D + I+ ++
Sbjct: 744 IYWTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTNMIESSNM 802
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 146/358 (40%), Gaps = 64/358 (17%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 146 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 205
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P +DI
Sbjct: 206 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGGKRKEILSA-LYSP----MDIQV 256
Query: 250 RRVYFADSKLDFIDCKSLEIKTNVNYSTIF--RKLYWIDEGGNGVPLKI-GKANMDGSNA 306
+ + F + E ++ + R+ ++ GV L+ G+ G+
Sbjct: 257 ----LSQERQPFFHTRCEEDNGGCSHLCLLSPREPFYTCACPTGVQLQDNGRTCKAGAEE 312
Query: 307 SILVSGQL-YEALALDLENGMLYYSTLKCTR------------WLFWTDWGENPRIERIG 353
+L++ + ++LD + + R +++WTD E I R
Sbjct: 313 VLLLARRTDLRRISLDTPDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTD-DEVRAIRRAY 371
Query: 354 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL--- 410
+DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 372 LDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEP 431
Query: 411 ---MVEFTNDLM-----GDN---------------------GVP-ALALDLENGMLYY 438
+ LM G+N G P LALDL+ G LY+
Sbjct: 432 RAIALHPVMGLMYWTDWGENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYW 489
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 29/204 (14%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST 277
I RI ++ +N I T + + L D++ +Y+ D L +
Sbjct: 625 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKVAWARRAR--------- 675
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL------------DLENG 325
R+ W E VP + + + + L +LAL D+ +
Sbjct: 676 --RQSVW--ENLASVPAARASDTFLKALSYLFIYLFLRRSLALSPGLWPSDHPWRDMLDS 731
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
+L + +++WT+WG PRI R MDG+N T++ K+ N LT+D A +R+Y+
Sbjct: 732 PSRPFSLVPSSYIYWTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWT 790
Query: 386 DSKLDFIDFCNYDGTGRQQVILID 409
D + I+ N G+++V++ D
Sbjct: 791 DLDTNMIESSNM--LGQERVVIAD 812
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 15/129 (11%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C + L+ + C F
Sbjct: 860 DILVFHSSRQDGLNDCMHNNGQCGQLCLAIPGGHRCGCASHHTLDPSSRNCSP---PTTF 916
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D++ + GL V+ + YD + IYW+D R N I
Sbjct: 917 LLFSQKSAISRMIPD------DQHSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQN-I 969
Query: 174 EVCDENGTN 182
+ ++GT
Sbjct: 970 KRAKDDGTQ 978
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 306 ASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTI 362
++I+VSG L +A A+D + G +Y WTD E + + G+ +
Sbjct: 25 STIVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAVQNV 72
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 73 VISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------D 121
Query: 423 GVPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 122 QPRAIALDPAHGYMYWTDWG 141
>gi|47117045|sp|O88572.1|LRP6_MOUSE RecName: Full=Low-density lipoprotein receptor-related protein 6;
Short=LRP-6; Flags: Precursor
gi|3462529|gb|AAC33007.1| LDL receptor-related protein 6 [Mus musculus]
Length = 1613
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 115/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKSESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++
Sbjct: 139 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFVIINTEIYWPNGLTLDYQERKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 223 SLPHPFALTLFEDTLY-----------WTDW 242
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 108/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 394 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD +Y+ D+K
Sbjct: 454 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGTIYWGDAKT 511
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 512 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 537
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 538 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREVII 569
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFVIINTEIYWPNGLTLDYQERKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 110/237 (46%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEDNGGCSHLCLYRPQGLRCACPIGFELIGDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ +
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSDM 820
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 122/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 395 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD +Y+ D+K D I+ N DGTGR+ ++
Sbjct: 472 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGTIYWGDAKTDKIEVMNTDGTGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ + G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSDMLGLNR-EVIADDLPHPF 836
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 151/357 (42%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A + FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PSTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNSIRKAHEDGGQGFNVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
+++ QP + +D +R+++WT N I+ +DG + ++ + P
Sbjct: 1004 ANSVANQNLEIQPYDLSIDIY--SRYIYWTCEATN-VIDVTRLDGRSVGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPIALALDSKLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 122/323 (37%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE D G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSDMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QAGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPSTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DG ++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-SIRKAHEDGGQGFNVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + ID DG V
Sbjct: 1004 ANSVANQNLEIQPYDLSIDIYSRYIYWTCEATNVIDVTRLDGRSVGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 23/150 (15%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
L++ A NA+I+V G L +A A+D G ++W+D E I+R
Sbjct: 31 LRLVDATNGKENATIVVGG-LEDAAAVDFVFGH---------GLIYWSDVSEEA-IKRTE 79
Query: 354 MDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+ S ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 80 FNKSESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL-- 137
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 ---------DQPRAIALDPSSGFMYWTDWG 158
>gi|449274472|gb|EMC83614.1| Low-density lipoprotein receptor-related protein 5, partial
[Columba livia]
Length = 1545
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 124/245 (50%), Gaps = 48/245 (19%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
Q++++SGL +GLA DWIG +YW DS NRIEV + NGT+R VL ++ QPR + L
Sbjct: 22 VQNVIISGLVSPDGLACDWIGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIAL 81
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP+ G +++WTDWGE PRIER GMD S R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 82 DPAHG--YMYWTDWGETPRIERAGMDSSTRKIIVDSDIYWPNGLTIDLDEQKLYWADAKL 139
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
FI +AN+DGS +V G L A
Sbjct: 140 SFIH----------------------------------RANLDGSFRQKVVEGTLTHPFA 165
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L L LY WTDW G R I+S +Y P + +
Sbjct: 166 LTLSGDTLY-----------WTDWQTRSIHACNKRTGEKRREILSA-LYSPMDIQVLSPD 213
Query: 380 RRVYF 384
R+ YF
Sbjct: 214 RQPYF 218
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 155/343 (45%), Gaps = 71/343 (20%)
Query: 33 CKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C+ G CS+ C +P C CP G L +D TC+ + E+ ++ + S
Sbjct: 222 CEESNGGCSHLCLLSPRDPFYSCACPTGVQLEDDGRTCK--SGAEEVLLLARRTDLRRIS 279
Query: 91 YICSCNEGYVLEYDNHTCKAINHSAA----------FLIISNRHSILVADLEEKGKDHRA 140
+L+ DN I H+ A + + +I A L+ G A
Sbjct: 280 LDMPDFTDIILQIDN-----IRHAIAIDYDPVEGYIYWTDDDVRAIRRAYLDGSG----A 330
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q +V + ++ +G+A DW+ ++YW D+ +RIEV NGT+R +L +N+ +PR ++L+
Sbjct: 331 QTLVTTEINHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILISENLDEPRAIVLN 390
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWGE+P+IE +DGS R +++T + WPNGL LD+ ++Y+ D+K D
Sbjct: 391 PVMG--YMYWTDWGESPKIECAYLDGSERRVLVNTSLGWPNGLALDLEKDKLYWGDAKTD 448
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
KI N+DG+ L+ +L
Sbjct: 449 ----------------------------------KIEVINVDGTMRKTLLEDKLPHIFGF 474
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ ++R II
Sbjct: 475 TLLGDYIY-----------WTDW-QRRSIERVHKIKASRDIII 505
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 148/349 (42%), Gaps = 95/349 (27%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE 132
E G CS +C + Y C+C G LE D TCK+ + L+++ R
Sbjct: 224 ESNGGCSHLCLLSPRDPFYSCACPTGVQLEDDGRTCKS--GAEEVLLLARR--------- 272
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
+ L RI + D I+L DNI
Sbjct: 273 -----------------------------------TDLRRISL-DMPDFTDIILQIDNIR 296
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
+ DP G +++WTD + I R +DGS T+++T+I P+G+ +D
Sbjct: 297 HAIAIDYDPVEG--YIYWTD-DDVRAIRRAYLDGSGAQTLVTTEINHPDGIAVDW----- 348
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+ R LYW D G + +I ++G++ IL+S
Sbjct: 349 -------------------------VARNLYWTDTGTD----RIEVTRLNGTSRKILISE 379
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
L E A+ L M Y ++WTDWGE+P+IE +DGS R +++T + WPNG
Sbjct: 380 NLDEPRAIVLNPVMGY---------MYWTDWGESPKIECAYLDGSERRVLVNTSLGWPNG 430
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
L LD+ ++Y+ D+K D I+ N DGT R+ ++ L F L+GD
Sbjct: 431 LALDLEKDKLYWGDAKTDKIEVINVDGTMRKTLLEDKLPHIFGFTLLGD 479
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 86/146 (58%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
I +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 41 IGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 89
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMD S R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 90 ----WTDWGETPRIERAGMDSSTRKIIVDSDIYWPNGLTIDLDEQKLYWADAKLSFIHRA 145
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 146 NLDGSFRQKVVEGTLTHPFALTLSGD 171
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 108/237 (45%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E G CS +C T C+C G L D TC AFL+ ++R +I
Sbjct: 526 NSCAESNGGCSHLCFFTPQETRCACPIGLELLSDMKTCII---PEAFLVFTSRAAIHRIS 582
Query: 131 LEEKGKD----------------------------------------HRAQDIVVSGLDL 150
LE D + ++ GLD
Sbjct: 583 LETNNNDVAIPLTGVKEASALDFDVSDNRIYWTDVSLKTISRAFMNGSSVEHVIEFGLDY 642
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 643 PEGMAVDWMGRNLYWADTGTNRIEVARLDGQHRQVLVWKDLDNPRSLALDPTKG--YMYW 700
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG PRI R MDG+N T++ K+ N LT+D A +R+Y+ D I+ ++
Sbjct: 701 TEWGGKPRIVRAYMDGTNSITLVD-KVGRANDLTIDYADQRLYWTDLDTSMIESSNM 756
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ R+Y+ D L F++ S+E I+
Sbjct: 578 IHRISLETNNNDVAIPLTGVKEASALDFDVSDNRIYWTDVSLKTISRAFMNGSSVEHVIE 637
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + R LYW D G N +I A +DG + +LV L +LALD
Sbjct: 638 FGLDYPEGMAVDWMGRNLYWADTGTN----RIEVARLDGQHRQVLVWKDLDNPRSLALDP 693
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 694 TKGYMY-----------WTEWGGKPRIVRAYMDGTNSITLVD-KVGRANDLTIDYADQRL 741
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D I+ N G R ++I DL F
Sbjct: 742 YWTDLDTSMIESSNMLGQER-EIIADDLPHPF 772
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 142/351 (40%), Gaps = 95/351 (27%)
Query: 59 EILSNDSVTCQDMNECEQP-GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C Q G+C +C + C C Y L+ ++ C + A+F
Sbjct: 814 DILVFHSSRQDGLNDCVQNNGHCGHLCLAIPNGFRCGCAAHYTLDPNSRNCSS---PASF 870
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D R+ DI++ GL V+ + YD + IYW+D R N I
Sbjct: 871 LLFSQKSAISRMIPD------DQRSPDIILPMHGLRNVKAIDYDPLDKLIYWVDGRQNII 924
Query: 174 EVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
+ ++GT + ++ P +M P + +NP +
Sbjct: 925 KRAKDDGT------QASLPGPFTVMSTP----------NQSQNPEKQ------------- 955
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
P+ L++DI + LYW E N V
Sbjct: 956 ------PHDLSIDIYSH------------------------------TLYWTCEATNSVN 979
Query: 294 LKIGKANMDGSNASILVSGQ--LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
+ ++G + +++ G A+ ++ E G +Y++ ++ P+IER
Sbjct: 980 VH----RLNGESIGMVLRGDHDKPRAIVVNAERGYMYFTNMQ----------DRAPKIER 1025
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
+DG+ R + +T + P L +D ++++ D+ L I+ C+ G R
Sbjct: 1026 AALDGTEREVLFTTGLIRPVALVIDNKLGKLFWVDADLKRIESCDLSGANR 1076
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 131/317 (41%), Gaps = 45/317 (14%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V + L GLA D +YW D++ ++IEV + +GT R L +D + G L
Sbjct: 420 LVNTSLGWPNGLALDLEKDKLYWGDAKTDKIEVINVDGTMRKTLLEDKLPHIFGFTL--- 476
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIIS-------------TKIYWPNGLTLDIA- 248
+++WTDW + IER+ ++R II TK++ N
Sbjct: 477 -LGDYIYWTDW-QRRSIERVHKIKASRDIIIDQLPDLMGLKATSVTKVFGTNSCAESNGG 534
Query: 249 -TRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307
+ +F + LE+ +++ I + + N D +
Sbjct: 535 CSHLCFFTPQETRCACPIGLELLSDMKTCIIPEAFLVFTSRAAIHRISLETNNND---VA 591
Query: 308 ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 367
I ++G + EA ALD + ++WTD I R M+GS+ +I +
Sbjct: 592 IPLTG-VKEASALDFDVS---------DNRIYWTDVSLK-TISRAFMNGSSVEHVIEFGL 640
Query: 368 YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPAL 427
+P G+ +D R +Y+AD+ + I+ DG RQ ++ DL + +L
Sbjct: 641 DYPEGMAVDWMGRNLYWADTGTNRIEVARLDGQHRQVLVWKDL-----------DNPRSL 689
Query: 428 ALDLENGMLYYSTEGAE 444
ALD G +Y++ G +
Sbjct: 690 ALDPTKGYMYWTEWGGK 706
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 126/293 (43%), Gaps = 31/293 (10%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 99 IERAGMDSSTRKIIVDSDIYWPNGLTIDLDEQKLYWADAKLSFIHRANLDGSFRQKVVEG 158
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
+T P + L L+WTDW G R I+S +Y P + +
Sbjct: 159 TLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGEKRREILSA-LYSPMDIQVLSPD 213
Query: 250 RRVYFADSKLDFIDCKSLEIKTNVNYSTIF--RKLYWIDEGGNGVPLK-IGKANMDGSNA 306
R+ YF C+ E ++ + R ++ GV L+ G+ G+
Sbjct: 214 RQPYF------HTPCE--ESNGGCSHLCLLSPRDPFYSCACPTGVQLEDDGRTCKSGAEE 265
Query: 307 SILVSGQL-YEALALDLENGMLYYSTLKCTR------------WLFWTDWGENPRIERIG 353
+L++ + ++LD+ + + R +++WTD + I R
Sbjct: 266 VLLLARRTDLRRISLDMPDFTDIILQIDNIRHAIAIDYDPVEGYIYWTD-DDVRAIRRAY 324
Query: 354 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ +I
Sbjct: 325 LDGSGAQTLVTTEINHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILI 377
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D+ +AI N ++ +N +E D ++++ +GL L
Sbjct: 989 GMVLRGDHDKPRAIVVNAERGYMYFTNMQD-RAPKIERAALDGTEREVLFTTGLIRPVAL 1047
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + L+W D
Sbjct: 1048 VIDNKLGKLFWVDADLKRIESCDLSGANRVTLEDSNILQPMGLTV----LGNHLYWID-R 1102
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ + T I +I G+
Sbjct: 1103 QQQMIERVEKINGYKRTRIQGRIAHLTGI 1131
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 12/105 (11%)
Query: 339 FWTDWGENP-RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
FWTD E + I G+ +I + + P+GL D +++Y+ DS+ + I+ N
Sbjct: 1 FWTDVSEEAIKQTYINQTGNVVQNVIISGLVSPDGLACDWIGKKLYWTDSETNRIEVANL 60
Query: 398 DGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+GT R+ + DL + A+ALD +G +Y++ G
Sbjct: 61 NGTSRKVLFWQDL-----------DQPRAIALDPAHGYMYWTDWG 94
>gi|148727327|ref|NP_032540.2| low-density lipoprotein receptor-related protein 6 precursor [Mus
musculus]
gi|38174481|gb|AAH60704.1| Low density lipoprotein receptor-related protein 6 [Mus musculus]
Length = 1613
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 115/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++
Sbjct: 139 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFVIINTEIYWPNGLTLDYQERKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 223 SLPHPFALTLFEDTLY-----------WTDW 242
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 108/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 394 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD +Y+ D+K
Sbjct: 454 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGTIYWGDAKT 511
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 512 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 537
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 538 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREVII 569
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFVIINTEIYWPNGLTLDYQERKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 110/237 (46%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEDNGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ +
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSDM 820
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 122/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 395 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD +Y+ D+K D I+ N DGTGR+ ++
Sbjct: 472 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGTIYWGDAKTDKIEVMNTDGTGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ + G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSDMLGLNR-EVIADDLPHPF 836
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 150/357 (42%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNSIRKAHEDGGQGFNVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
+++ QP + +D +R+++WT N I+ +DG + ++ + P
Sbjct: 1004 ANSVANQNLEIQPYDLSIDIY--SRYIYWTCEATN-VIDVTRLDGRSVGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPIALALDSKLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 122/323 (37%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE D G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSDMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QAGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DG ++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-SIRKAHEDGGQGFNVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + ID DG V
Sbjct: 1004 ANSVANQNLEIQPYDLSIDIYSRYIYWTCEATNVIDVTRLDGRSVGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 23/150 (15%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
L++ A NA+I+V G L +A A+D G ++W+D E I+R
Sbjct: 31 LRLVDATNGKENATIVVGG-LEDAAAVDFVFGH---------GLIYWSDVSEEA-IKRTE 79
Query: 354 MDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 80 FNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL-- 137
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 ---------DQPRAIALDPSSGFMYWTDWG 158
>gi|148234168|ref|NP_001079163.1| low density lipoprotein receptor-related protein 5 precursor
[Xenopus laevis]
gi|22854902|gb|AAN09806.1| lipoprotein receptor-related protein 5 [Xenopus laevis]
Length = 1605
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 130/268 (48%), Gaps = 54/268 (20%)
Query: 110 AINHSAAFLIISNRHSILVADLEEKG-------KDHRAQDIVVSGLDLVEGLAYDWIGGH 162
++ +AA + ++ I D+ E+ + +Q +V+ GL +GLA DW+G
Sbjct: 50 SLEDAAAVDFLYSQGVIYWTDVSEESIKQTLFNQSSNSQTVVIPGLVSPDGLAVDWVGKK 109
Query: 163 IYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI 222
+YW DS NRIEV + NGT R VL ++ QPR + LDP+ G +++WTDWGE PRIER
Sbjct: 110 LYWTDSETNRIEVANLNGTYRKVLFWQDLDQPRAIALDPAHG--YMYWTDWGETPRIERA 167
Query: 223 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
GMDGS R I+ T IYWPNGLT+D+ +++Y+AD+ LDFI
Sbjct: 168 GMDGSTRKVIVDTDIYWPNGLTIDLDEQKLYWADASLDFIH------------------- 208
Query: 283 YWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD 342
KAN DGS +V G L AL L LY WTD
Sbjct: 209 ---------------KANWDGSFRQKVVEGSLTHPFALTLTGKTLY-----------WTD 242
Query: 343 WGENPRIERIGMDGSNRSTIISTKIYWP 370
W G R I++ +Y P
Sbjct: 243 WQTRSIHACNKRTGEKRREILTILLYSP 270
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 106/215 (49%), Gaps = 47/215 (21%)
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
++WTD E + + SN T++ + P+GL +D
Sbjct: 66 IYWTDVSEESIKQTLFNQSSNSQTVVIPGLVSPDGLAVDW-------------------- 105
Query: 268 EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENG 325
+ +KLYW D N +I AN++G+ +L L + A+ALD +G
Sbjct: 106 ----------VGKKLYWTDSETN----RIEVANLNGTYRKVLFWQDLDQPRAIALDPAHG 151
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
+Y WTDWGE PRIER GMDGS R I+ T IYWPNGLT+D+ +++Y+A
Sbjct: 152 YMY-----------WTDWGETPRIERAGMDGSTRKVIVDTDIYWPNGLTIDLDEQKLYWA 200
Query: 386 DSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMG 420
D+ LDFI N+DG+ RQ+V+ L F L G
Sbjct: 201 DASLDFIHKANWDGSFRQKVVEGSLTHPFALTLTG 235
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 148/334 (44%), Gaps = 63/334 (18%)
Query: 38 GLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSC 95
G CS+ C +P CTC G+ L++D TC+ + ++ + S
Sbjct: 294 GGCSHLCLLSPREPFYSCTCATGDQLTDDGKTCK--TGADDDLLLARRTDLRRISLDMPD 351
Query: 96 NEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD------IVVSGLD 149
VL+ D+ I H+ A I D E K D +V + +
Sbjct: 352 FTDIVLQIDD-----IRHAIAIDYDPTEGYIYWTDDEVKAIRRAYLDGSGVETLVTTEIQ 406
Query: 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
+G+A DW+ ++YW D+ +RIEV NGT+R +L +N+ +PR ++L+P G +++
Sbjct: 407 HPDGIAVDWVARNLYWTDTGTDRIEVTLLNGTSRKILISENLDEPRAIVLNPLTG--YMY 464
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEI 269
WTDWGENP+IE +DGS R ++++ + WPNGL LD+ ++Y+ D+K D
Sbjct: 465 WTDWGENPKIESAYLDGSERLVLVNSSLGWPNGLALDLQDGKLYWGDAKTD--------- 515
Query: 270 KTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
KI ++DGSN L+ +L L +Y
Sbjct: 516 -------------------------KIEVISVDGSNRKTLLEDKLPHIFGFTLLGDYIY- 549
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ ++R II
Sbjct: 550 ----------WTDW-QRRSIERVHKVRASREIII 572
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 119/238 (50%), Gaps = 46/238 (19%)
Query: 184 IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
IVL D+I + DP+ G +++WTD E I R +DGS T+++T+I P+G+
Sbjct: 355 IVLQIDDIRHAIAIDYDPTEG--YIYWTD-DEVKAIRRAYLDGSGVETLVTTEIQHPDGI 411
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
+D + R LYW D G + + + + ++G
Sbjct: 412 AVDW------------------------------VARNLYWTDTGTDRIEVTL----LNG 437
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
++ IL+S L E A+ L T +++WTDWGENP+IE +DGS R ++
Sbjct: 438 TSRKILISENLDEPRAIVLN---------PLTGYMYWTDWGENPKIESAYLDGSERLVLV 488
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++ + WPNGL LD+ ++Y+ D+K D I+ + DG+ R+ ++ L F L+GD
Sbjct: 489 NSSLGWPNGLALDLQDGKLYWGDAKTDKIEVISVDGSNRKTLLEDKLPHIFGFTLLGD 546
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 120/249 (48%), Gaps = 34/249 (13%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPG----YCSQMC--- 84
C G CS+ C +P G C+CP G E+LS DM C P + S+
Sbjct: 595 CADNNGGCSHLCFFSPRGVRCSCPIGLELLS-------DMRTCIIPEAFLVFTSRATIHR 647
Query: 85 ------TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH 138
N + E L++D ++ + + +I A + +H
Sbjct: 648 ISLETNNNDVAIPLTGVKEASALDFD------VSDNRLYWTDITTRAISRAFMNGSSVEH 701
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
++ GLD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR +
Sbjct: 702 ----VIEFGLDYPEGMAVDWMGKNLYWSDTGTNRIEVSRLDGLYRQVLVWKDLDNPRSLA 757
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
LDP+ G +++WT+WG PRI R MDG+N + I+ K+ N LT+D A +R+Y+ D
Sbjct: 758 LDPAKG--YMYWTEWGGKPRIVRAYMDGTN-NIILVDKVGRANDLTIDYADQRLYWTDLD 814
Query: 259 LDFIDCKSL 267
+ I+ ++
Sbjct: 815 TNMIESSNM 823
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 118/293 (40%), Gaps = 73/293 (24%)
Query: 59 EILSNDSVTCQDMNECEQ-PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C Q G+CSQ+C CSC+ Y L +N C + F
Sbjct: 881 DILVFHSSRQDGLNDCMQNSGHCSQLCLAVPKGSKCSCSSHYTLASNNRDCSP---PSNF 937
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEV 175
L+ S + +I L+E+ ++ DI + GL V+ ++YD G IYW+D R N I+
Sbjct: 938 LLFSQKTAINRMLLDEQ----QSPDITLPIHGLRNVKAISYDPADGLIYWVDGRQNNIKR 993
Query: 176 CDENGTNRIVL------AKDNITQPRGMMLDPSPGTRWLFWTDWGEN------------- 216
++GT V+ ++ QP + +D +R L+WT G N
Sbjct: 994 SKDDGTQSFVVVSTPNQSQTQEKQPHDLSIDIY--SRTLYWTCEGTNTINANKLNGESLG 1051
Query: 217 -------------------------------PRIERIGMDGSNRSTIISTKIYWPNGLTL 245
P+IER DG+ R + ST + P L +
Sbjct: 1052 VVLRGENDKPRAIAVNAERGYMYFTNMQERSPKIERAAFDGTEREVLFSTGLIRPVALVV 1111
Query: 246 DIATRRVYFADSKLDFIDCKSLEIKTNVNY--STIFRK---------LYWIDE 287
D ++++ D+ L I+ L V S I + LYWID+
Sbjct: 1112 DNKLGKLFWVDADLKRIESSDLSGANRVTLEDSNILQPMGLTILGDYLYWIDK 1164
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 100/212 (47%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ R+Y+ D F++ S+E I+
Sbjct: 645 IHRISLETNNNDVAIPLTGVKEASALDFDVSDNRLYWTDITTRAISRAFMNGSSVEHVIE 704
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG +LV L +LALD
Sbjct: 705 FGLDYPEGMAVDWMGKNLYWSDTGTN----RIEVSRLDGLYRQVLVWKDLDNPRSLALDP 760
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N + I+ K+ N LT+D A +R+
Sbjct: 761 AKGYMY-----------WTEWGGKPRIVRAYMDGTN-NIILVDKVGRANDLTIDYADQRL 808
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R ++I DL F
Sbjct: 809 YWTDLDTNMIESSNMLGAER-EIIADDLPHPF 839
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVS-GLDLVEGL 154
G VL +N +AI N ++ +N +E D ++++ S GL L
Sbjct: 1051 GVVLRGENDKPRAIAVNAERGYMYFTNMQE-RSPKIERAAFDGTEREVLFSTGLIRPVAL 1109
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE D +G NR+ L NI QP G+ + +L+W D
Sbjct: 1110 VVDNKLGKLFWVDADLKRIESSDLSGANRVTLEDSNILQPMGLTI----LGDYLYWID-K 1164
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ R T I +I P G+
Sbjct: 1165 QQQMIERVEKTNGIRRTKIQGRIAHPTGI 1193
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 20/136 (14%)
Query: 307 SILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 366
S++V L +A A+D LY + ++WTD E + + SN T++
Sbjct: 44 SVVVVSSLEDAAAVDF----LYSQGV-----IYWTDVSEESIKQTLFNQSSNSQTVVIPG 94
Query: 367 IYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPA 426
+ P+GL +D +++Y+ DS+ + I+ N +GT R+ + DL + A
Sbjct: 95 LVSPDGLAVDWVGKKLYWTDSETNRIEVANLNGTYRKVLFWQDL-----------DQPRA 143
Query: 427 LALDLENGMLYYSTEG 442
+ALD +G +Y++ G
Sbjct: 144 IALDPAHGYMYWTDWG 159
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 30/169 (17%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYS 330
++Y +YW D+ I +A +DGS LV+ ++ + +A+D
Sbjct: 368 IDYDPTEGYIYWTDDEVKA----IRRAYLDGSGVETLVTTEIQHPDGIAVDW-------- 415
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD-SKL 389
R L+WTD G + RIE ++G++R +IS + P + L+ T +Y+ D +
Sbjct: 416 ---VARNLYWTDTGTD-RIEVTLLNGTSRKILISENLDEPRAIVLNPLTGYMYWTDWGEN 471
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYY 438
I+ DG+ R ++L++ + + N LALDL++G LY+
Sbjct: 472 PKIESAYLDGSER--LVLVNSSLGWPN---------GLALDLQDGKLYW 509
>gi|344266634|ref|XP_003405385.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 6-like [Loxodonta africana]
Length = 1605
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 115/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 71 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 130
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++
Sbjct: 131 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFVIINTEIYWPNGLTLDYEERKL 188
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 189 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 214
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 215 SLPHPFALTLFEDTLY-----------WTDW 234
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 386 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 445
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 446 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKT 503
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 504 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 529
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 530 FTLLGDFVY-----------WTDW-QRRSIERVHKRSAEREIII 561
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 100 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 145
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++Y+AD+KL+FI N D
Sbjct: 146 -WTDWGEVPKIERAGMDGSSRFVIINTEIYWPNGLTLDYEERKLYWADAKLNFIHKSNLD 204
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 205 GTNRQAVVKGSLPHPFALTLFED 227
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 582 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 638
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 639 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 698
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 699 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 756
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 757 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 812
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 331 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGS 386
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 387 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 416
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 417 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 463
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 464 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDK 523
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 524 IPHIFGFTLLGD 535
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 634 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 693
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 694 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 749
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 750 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 797
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 798 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 828
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 123/310 (39%), Gaps = 78/310 (25%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 883 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNTDNRTCSA---PTTFLLFSQKSAINRM 939
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI--- 184
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+
Sbjct: 940 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQSFTVV 995
Query: 185 ----------------------------------------------VLAKDNITQPRGMM 198
V+ K +PR ++
Sbjct: 996 VSSVPNQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSIGVVLKGEQDRPRAIV 1055
Query: 199 LDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++P G ++++T+ E +P+IER +DG+ R + + + P L LD ++++ADS
Sbjct: 1056 VNPEKG--YMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADS 1113
Query: 258 KLDFIDCKSLE-----------IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
L I+ L I V + LYWID+ I K +M G
Sbjct: 1114 DLRRIESSDLSGANRIVLEDSNILQPVGLTVFENWLYWIDKQQQ----MIEKIDMMGREG 1169
Query: 307 SILVSGQLYE 316
V ++ +
Sbjct: 1170 RTKVQARIAQ 1179
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 765 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 823
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 824 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 878
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYW---IDEGGNGVPLKIGKANMDGSNAS 307
+ + + C L + V ++ D P + +
Sbjct: 879 QAGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNTDNRTCSAPTTFLLFSQKSAINR 938
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 939 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQSFTVV 995
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 996 VSSVPNQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSIGVV------------ 1043
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1044 LKGEQDRPRAIVVNPEKGYMYFT 1066
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 32/171 (18%)
Query: 282 LYWIDEGGNGVPL---------KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+Y + GG PL ++ A NA+I+V G L +A A+D G
Sbjct: 2 VYVLQPGGEAAPLLLYANRRDLRLVDATNGKENATIVVGG-LEDAAAVDFVFGH------ 54
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
++W+D E I+R + + ++ + + P+GL D ++Y+ DS+ +
Sbjct: 55 ---GLIYWSDVSEEA-IKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNR 110
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
I+ N DG+ R+ + +L + A+ALD +G +Y++ G
Sbjct: 111 IEVSNLDGSLRKVLFWQEL-----------DQPRAIALDPSSGFMYWTDWG 150
>gi|395850489|ref|XP_003797818.1| PREDICTED: low-density lipoprotein receptor-related protein 6
isoform 1 [Otolemur garnettii]
Length = 1613
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 115/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++
Sbjct: 139 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFVIINTEIYWPNGLTLDYEERKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 223 SLPHPFALTLFEDTLY-----------WTDW 242
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 394 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 454 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYEESKIYWGDAKT 511
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 512 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 537
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 538 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREIII 569
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFVIINTEIYWPNGLTLDYEERKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 395 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 472 ERAALDGSDRVVLVNTSLGWPNGLALDYEESKIYWGDAKTDKIEVMNTDGTGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 125/310 (40%), Gaps = 78/310 (25%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG------- 180
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 181 -------------------------------TNRI-----------VLAKDNITQPRGMM 198
TN I V+ K +PR ++
Sbjct: 1004 VSSAPNQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSIGVVLKGEQDRPRAIV 1063
Query: 199 LDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++P G ++++T+ E +P+IER +DG+ R + + + P L LD ++++ADS
Sbjct: 1064 VNPEKG--YMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADS 1121
Query: 258 KLDFIDCKSLE-----------IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
L I+ L I V + LYWID+ I K +M G
Sbjct: 1122 DLRRIESSDLSGANRIVLEDSNILQPVGLTVFENWLYWIDKQQQ----MIEKIDMTGREG 1177
Query: 307 SILVSGQLYE 316
V ++ +
Sbjct: 1178 RTKVQARIAQ 1187
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 123/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QAGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSAPNQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSIGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 23/150 (15%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
L++ A NA+I+V G L +A A+D G ++W+D E I+R
Sbjct: 31 LRLVDATNGKENATIVVGG-LEDAAAVDFVFGH---------GLIYWSDVSEEA-IKRTE 79
Query: 354 MDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 80 FNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL-- 137
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 ---------DQPRAIALDPSSGFMYWTDWG 158
>gi|291392624|ref|XP_002712701.1| PREDICTED: low density lipoprotein receptor-related protein 6
[Oryctolagus cuniculus]
Length = 1613
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 115/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++
Sbjct: 139 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFVIINTEIYWPNGLTLDYEERKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 223 SLPHPFALTLFEDTLY-----------WTDW 242
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 394 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 454 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKT 511
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 512 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 537
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 538 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREIII 569
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFVIINTEIYWPNGLTLDYEERKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVDG--YIYWTD-DEVRAIRRSFIDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 395 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 472 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPNQNLEIQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRSIGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPERGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPIALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QAGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSVPNQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSIGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPERGYMYFT 1074
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 23/150 (15%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
L++ A NA+I+V G L +A A+D G ++W+D E I+R
Sbjct: 31 LRLVDATNGRENATIVVGG-LEDAAAVDFVFGH---------GLIYWSDVSEEA-IKRTE 79
Query: 354 MDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 80 FNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL-- 137
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 ---------DQPRAIALDPSSGFMYWTDWG 158
>gi|224050971|ref|XP_002199539.1| PREDICTED: low-density lipoprotein receptor-related protein 5
[Taeniopygia guttata]
Length = 1623
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 124/245 (50%), Gaps = 48/245 (19%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
Q++++SGL +GLA DWIG +YW DS NRIEV + NGT+R VL ++ QPR + L
Sbjct: 105 VQNVIISGLVSPDGLACDWIGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIAL 164
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP+ G +++WTDWGE PRIER GMD S R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 165 DPAHG--YMYWTDWGETPRIERAGMDSSMRKIIVDSDIYWPNGLTIDLDEQKLYWADAKL 222
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
FI +AN+DGS +V G L A
Sbjct: 223 SFIH----------------------------------RANLDGSFRQKVVEGSLTHPFA 248
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L L LY WTDW G R I+S +Y P + +
Sbjct: 249 LTLSGDTLY-----------WTDWQTRSIHACNKRTGEKRREILSA-LYSPMDIQVLSPD 296
Query: 380 RRVYF 384
R+ YF
Sbjct: 297 RQPYF 301
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 154/343 (44%), Gaps = 71/343 (20%)
Query: 33 CKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C+ G CS+ C +P C CP G L +D TC+ E+ ++ + S
Sbjct: 305 CEENNGGCSHLCLLSPRDPFYSCACPTGVQLEDDGRTCK--AGAEEVLLLARRTDLRRIS 362
Query: 91 YICSCNEGYVLEYDNHTCKAINHSAA----------FLIISNRHSILVADLEEKGKDHRA 140
+L+ DN I H+ A + + +I A L+ G A
Sbjct: 363 LDTPDFTDIILQIDN-----IRHAIAIDYDPVEGYIYWTDDDVRAIRRAYLDGTG----A 413
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q +V + ++ +G+A DW+ ++YW D+ +RIEV NGT+R +L +N+ +PR ++L+
Sbjct: 414 QTLVTTEINHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILIAENLDEPRAIVLN 473
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWGE+P+IE +DGS R +++T + WPNGL LD+ ++Y+ D+K D
Sbjct: 474 PVMG--YMYWTDWGESPKIECAYLDGSERRVLVNTSLGWPNGLALDLEKNKLYWGDAKTD 531
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
KI N+DG+ L+ +L
Sbjct: 532 ----------------------------------KIEVINVDGTMRKTLLEDKLPHIFGF 557
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ ++R II
Sbjct: 558 TLLGDYIY-----------WTDW-QRRSIERVHKIKASRDIII 588
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 150/349 (42%), Gaps = 95/349 (27%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE 132
E G CS +C + Y C+C G LE D TCKA + L+++ R
Sbjct: 307 ENNGGCSHLCLLSPRDPFYSCACPTGVQLEDDGRTCKA--GAEEVLLLARR--------- 355
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
+ L RI + + T+ I+L DNI
Sbjct: 356 -----------------------------------TDLRRISLDTPDFTD-IILQIDNIR 379
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
+ DP G +++WTD + I R +DG+ T+++T+I P+G+ +D
Sbjct: 380 HAIAIDYDPVEG--YIYWTD-DDVRAIRRAYLDGTGAQTLVTTEINHPDGIAVDW----- 431
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+ R LYW D G + +I ++G++ IL++
Sbjct: 432 -------------------------VARNLYWTDTGTD----RIEVTRLNGTSRKILIAE 462
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
L E A+ L M Y ++WTDWGE+P+IE +DGS R +++T + WPNG
Sbjct: 463 NLDEPRAIVLNPVMGY---------MYWTDWGESPKIECAYLDGSERRVLVNTSLGWPNG 513
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
L LD+ ++Y+ D+K D I+ N DGT R+ ++ L F L+GD
Sbjct: 514 LALDLEKNKLYWGDAKTDKIEVINVDGTMRKTLLEDKLPHIFGFTLLGD 562
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 86/146 (58%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
I +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 124 IGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 172
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMD S R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 173 ----WTDWGETPRIERAGMDSSMRKIIVDSDIYWPNGLTIDLDEQKLYWADAKLSFIHRA 228
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 229 NLDGSFRQKVVEGSLTHPFALTLSGD 254
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 118/249 (47%), Gaps = 34/249 (13%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPG----YCSQMC--- 84
C G CS+ C TP A C CP G E+LS DM C P + S+
Sbjct: 611 CAENNGGCSHLCFFTPQEARCACPIGLELLS-------DMKTCIIPEAFLVFTSRAAIHR 663
Query: 85 ------TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH 138
N + E L++D ++ + + + +I A + +H
Sbjct: 664 ISLETNNNDVAIPLTGVKEASALDFD------VSDNRIYWTDVSLKTISRAFMNGSSVEH 717
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
++ GLD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR +
Sbjct: 718 ----VIEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGQYRQVLVWKDLDNPRSLA 773
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
LDP+ G +++WT+WG PRI R MDG+N T++ K+ N LT+D +R+Y+ D
Sbjct: 774 LDPTKG--YMYWTEWGGKPRIVRAYMDGTNSITLVD-KVGRANDLTIDYVDQRLYWTDLD 830
Query: 259 LDFIDCKSL 267
I+ ++
Sbjct: 831 TSMIESSNM 839
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 141/351 (40%), Gaps = 100/351 (28%)
Query: 59 EILSNDSVTCQDMNECEQP-GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C Q G+C +C + C C Y L+ ++ C + A+F
Sbjct: 897 DILVFHSSRQDGLNDCVQNNGHCGHLCLAIPNGFRCGCAAHYTLDPNSRNCSS---PASF 953
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D ++ DI++ GL V+ + YD + IYW+D R N I
Sbjct: 954 LLFSQKSAISRMIPD------DQQSPDIILPMHGLRNVKAIDYDPLDKLIYWVDGRQNII 1007
Query: 174 EVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
+ AKD+ TQP +M P + +NP +
Sbjct: 1008 K-----------RAKDDGTQPFTVMSTP----------NQSQNPEKQ------------- 1033
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
P+ L++DI + LYW E N V
Sbjct: 1034 ------PHDLSIDIYSH------------------------------TLYWTCEATNSVN 1057
Query: 294 LKIGKANMDGSNASILVSGQ--LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
+ ++G + +++ G A+ ++ E G +Y++ ++ P+IER
Sbjct: 1058 VH----RLNGESIGMVLRGDHDRPRAIVVNAERGYMYFTNMQ----------ERAPKIER 1103
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
+DG+ R + +T + P L +D ++++ D+ L I+ C+ G R
Sbjct: 1104 AALDGTEREVLFTTGLIRPVALVVDNKLGKLFWVDADLKRIESCDLSGANR 1154
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 99/212 (46%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ R+Y+ D L F++ S+E I+
Sbjct: 661 IHRISLETNNNDVAIPLTGVKEASALDFDVSDNRIYWTDVSLKTISRAFMNGSSVEHVIE 720
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 721 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQYRQVLVWKDLDNPRSLALDP 776
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D +R+
Sbjct: 777 TKGYMY-----------WTEWGGKPRIVRAYMDGTNSITLVD-KVGRANDLTIDYVDQRL 824
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D I+ N G R ++I DL F
Sbjct: 825 YWTDLDTSMIESSNMLGQER-EIIADDLPHPF 855
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 126/301 (41%), Gaps = 39/301 (12%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 182 IERAGMDSSMRKIIVDSDIYWPNGLTIDLDEQKLYWADAKLSFIHRANLDGSFRQKVVEG 241
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 242 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGEKRREILSA-LYSPMDIQVLSPD 296
Query: 250 RRVYFAD---------SKLDFIDCK----SLEIKTNVNYSTIFRKLYWIDEGGNGVPL-- 294
R+ YF S L + + S T V R G V L
Sbjct: 297 RQPYFHTPCEENNGGCSHLCLLSPRDPFYSCACPTGVQLEDDGRT---CKAGAEEVLLLA 353
Query: 295 ---KIGKANMDGSNAS--ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ + ++D + + IL + A+A+D + +++WTD + I
Sbjct: 354 RRTDLRRISLDTPDFTDIILQIDNIRHAIAIDYD---------PVEGYIYWTD-DDVRAI 403
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
R +DG+ T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ +I +
Sbjct: 404 RRAYLDGTGAQTLVTTEINHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILIAEN 463
Query: 410 L 410
L
Sbjct: 464 L 464
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D+ +AI N ++ +N +E D ++++ +GL L
Sbjct: 1067 GMVLRGDHDRPRAIVVNAERGYMYFTNMQE-RAPKIERAALDGTEREVLFTTGLIRPVAL 1125
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + L+W D
Sbjct: 1126 VVDNKLGKLFWVDADLKRIESCDLSGANRVTLEDSNILQPMGLTV----LGNHLYWID-R 1180
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ + T I +I G+
Sbjct: 1181 QQQMIERVEKVNGYKRTRIQGRIAHLTGI 1209
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 22/138 (15%)
Query: 306 ASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTIIS 364
++++VSG L +A A+D + Y + +FWTD E + I G+ +I
Sbjct: 61 STVVVSG-LEDAAAVDFQ----YSQGI-----VFWTDVSEEAIKQTYINQTGNVVQNVII 110
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGV 424
+ + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 111 SGLVSPDGLACDWIGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------DQP 159
Query: 425 PALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 160 RAIALDPAHGYMYWTDWG 177
>gi|301624799|ref|XP_002941689.1| PREDICTED: low-density lipoprotein receptor-related protein 5-like
[Xenopus (Silurana) tropicalis]
Length = 1603
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 124/244 (50%), Gaps = 48/244 (19%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q +V+SGL +GLA DWIG +YW DS NRIEV + NGT R VL ++ QPR + LD
Sbjct: 88 QTVVISGLVSPDGLACDWIGKKLYWTDSETNRIEVGNLNGTYRKVLFWQDLDQPRAIALD 147
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWG+ PRIER GMDGS R I+ T IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 148 PAHG--YMYWTDWGDTPRIERAGMDGSMRKVIVDTDIYWPNGLTIDLDEQKLYWADAKLS 205
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
FI +AN+DGS +V G L AL
Sbjct: 206 FIH----------------------------------RANLDGSFRQKVVEGSLTHPFAL 231
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L LY WTDW G R I+S+ +Y P + + R
Sbjct: 232 TLAGDTLY-----------WTDWQTRSIHACNKRTGEKRREILSS-LYSPMDIQVFSKER 279
Query: 381 RVYF 384
+ YF
Sbjct: 280 QPYF 283
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 148/339 (43%), Gaps = 63/339 (18%)
Query: 33 CKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C G CS+ C +P CTCP G L+ D TC+ + ++ + S
Sbjct: 287 CDESNGGCSHLCLLSPREPFYSCTCPTGVQLTQDGKTCK--TGADDVLLLARRTDLRRIS 344
Query: 91 YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHR------AQDIV 144
VL+ D+ I H+ A I D E K AQ +V
Sbjct: 345 LDMPDFTDIVLQIDD-----IRHAIAIDYDPVEGYIYWTDDEVKAIRRAYLDGSGAQTLV 399
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ + +G+A DW+ ++YW D+ +RIEV NGT+R +L +N+ +PR ++L P G
Sbjct: 400 TTEVQHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILISENLDEPRAIVLHPLTG 459
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
+++WTDWGENP+IE +DGS R ++++ + WPNGL LD+ ++Y+ D+K D
Sbjct: 460 --YMYWTDWGENPKIESAYLDGSERMVLVNSSLGWPNGLALDLQDGKLYWGDAKTD---- 513
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
KI N+DGSN L+ +L L
Sbjct: 514 ------------------------------KIEVINVDGSNRKTLLEDKLPHIFGFTLLG 543
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+Y WTDW + IER+ ++R II
Sbjct: 544 DYIY-----------WTDW-QRRSIERVHKVRASREIII 570
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 105/216 (48%), Gaps = 47/216 (21%)
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
++WTD E + + SN T++ + + P+GL D
Sbjct: 66 IYWTDVSEESIKQTLYNQSSNLQTVVISGLVSPDGLACDW-------------------- 105
Query: 268 EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENG 325
I +KLYW D N +I N++G+ +L L + A+ALD +G
Sbjct: 106 ----------IGKKLYWTDSETN----RIEVGNLNGTYRKVLFWQDLDQPRAIALDPAHG 151
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
+Y WTDWG+ PRIER GMDGS R I+ T IYWPNGLT+D+ +++Y+A
Sbjct: 152 YMY-----------WTDWGDTPRIERAGMDGSMRKVIVDTDIYWPNGLTIDLDEQKLYWA 200
Query: 386 DSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
D+KL FI N DG+ RQ+V+ L F L GD
Sbjct: 201 DAKLSFIHRANLDGSFRQKVVEGSLTHPFALTLAGD 236
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 117/238 (49%), Gaps = 46/238 (19%)
Query: 184 IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
IVL D+I + DP G +++WTD E I R +DGS T+++T++ P+G+
Sbjct: 353 IVLQIDDIRHAIAIDYDPVEG--YIYWTD-DEVKAIRRAYLDGSGAQTLVTTEVQHPDGI 409
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
+D + R LYW D G + +I ++G
Sbjct: 410 AVDW------------------------------VARNLYWTDTGTD----RIEVTRLNG 435
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
++ IL+S L E A+ L T +++WTDWGENP+IE +DGS R ++
Sbjct: 436 TSRKILISENLDEPRAIVLH---------PLTGYMYWTDWGENPKIESAYLDGSERMVLV 486
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++ + WPNGL LD+ ++Y+ D+K D I+ N DG+ R+ ++ L F L+GD
Sbjct: 487 NSSLGWPNGLALDLQDGKLYWGDAKTDKIEVINVDGSNRKTLLEDKLPHIFGFTLLGD 544
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 120/249 (48%), Gaps = 34/249 (13%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPG----YCSQMC--- 84
C G CS+ C +P G C+CP G E+LS DM C P + S+
Sbjct: 593 CADNNGGCSHLCFFSPRGVRCSCPIGLELLS-------DMRTCIIPEAFLVFTSRATIHR 645
Query: 85 ------TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH 138
N + E L++D ++ + + +I A + +H
Sbjct: 646 ISLETNNNDVAIPLTGVKEASALDFD------VSDNRLYWTDITLKTISRAFMNGSSVEH 699
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
++ GLD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR +
Sbjct: 700 ----VIEFGLDYPEGMAVDWMGKNLYWSDTGTNRIEVSRLDGLYRQVLVWKDLDNPRSLA 755
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
LDP+ G +++WT+WG PRI R MDG+N S I+ K+ N LT+D A +R+Y+ D
Sbjct: 756 LDPAKG--YMYWTEWGGKPRIVRAYMDGTN-SIILVDKVGRANDLTIDYADQRLYWTDLD 812
Query: 259 LDFIDCKSL 267
+ I+ ++
Sbjct: 813 TNMIESSNM 821
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 151/369 (40%), Gaps = 96/369 (26%)
Query: 59 EILSNDSVTCQDMNECEQP-GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C Q G+CSQ+C Y CSC+ Y L+ +N C + F
Sbjct: 879 DILVFHSSRQDGLNDCMQNNGHCSQLCLAVPKGYKCSCSSHYTLDSNNRNCSP---PSNF 935
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEV 175
L+ S + +I L+E+ ++ DI + GL V+ ++YD + IYW+D R N I+
Sbjct: 936 LLFSQKTAINRMLLDEQ----QSPDITLPIHGLRNVKAVSYDPLDKLIYWVDGRQNIIK- 990
Query: 176 CDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST 235
AKD+ TQP ++ P + + P +
Sbjct: 991 ----------RAKDDGTQPFVVVSTP----------NQSQTPEKQ--------------- 1015
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
P+ L++DI + LYW EG N
Sbjct: 1016 ----PHDLSIDIYSH------------------------------TLYWTCEGTN----T 1037
Query: 296 IGKANMDGSNASILVSGQ--LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
I ++G + +++ G A+A++ E G LY++ ++ +P+IER
Sbjct: 1038 INANKLNGESIGVVLRGDHDKPRAIAVNAERGYLYFTNMQ----------ERSPKIERAA 1087
Query: 354 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
DG+ R + ST + P L +D ++++ D+ L I+ + G R + +++
Sbjct: 1088 FDGTEREVLFSTGLIRPVALVVDNKLGKLFWVDADLKRIESSDLSGANRVTLEDSNILQP 1147
Query: 414 FTNDLMGDN 422
++GD+
Sbjct: 1148 MGLTILGDH 1156
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 100/207 (48%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ R+Y+ D L F++ S+E I+
Sbjct: 643 IHRISLETNNNDVAIPLTGVKEASALDFDVSDNRLYWTDITLKTISRAFMNGSSVEHVIE 702
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG +LV L +LALD
Sbjct: 703 FGLDYPEGMAVDWMGKNLYWSDTGTN----RIEVSRLDGLYRQVLVWKDLDNPRSLALDP 758
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N S I+ K+ N LT+D A +R+
Sbjct: 759 AKGYMY-----------WTEWGGKPRIVRAYMDGTN-SIILVDKVGRANDLTIDYADQRL 806
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ N G ++VI+ D
Sbjct: 807 YWTDLDTNMIESSNM--LGAERVIIAD 831
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 135/320 (42%), Gaps = 51/320 (15%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V S L GLA D G +YW D++ ++IEV + +G+NR L +D + G L
Sbjct: 485 LVNSSLGWPNGLALDLQDGKLYWGDAKTDKIEVINVDGSNRKTLLEDKLPHIFGFTL--- 541
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD------ 256
+++WTDW + IER+ ++R II P+ + L A+ F
Sbjct: 542 -LGDYIYWTDW-QRRSIERVHKVRASREIIIDQ---LPDLMGLKAASVSNTFGTNPCADN 596
Query: 257 ----SKLDFIDCKS--------LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
S L F + LE+ +++ I + + N D
Sbjct: 597 NGGCSHLCFFSPRGVRCSCPIGLELLSDMRTCIIPEAFLVFTSRATIHRISLETNNND-- 654
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+I ++G + EA ALD + L+WTD I R M+GS+ +I
Sbjct: 655 -VAIPLTG-VKEASALDFD---------VSDNRLYWTDITLK-TISRAFMNGSSVEHVIE 702
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGV 424
+ +P G+ +D + +Y++D+ + I+ DG RQ ++ DL +
Sbjct: 703 FGLDYPEGMAVDWMGKNLYWSDTGTNRIEVSRLDGLYRQVLVWKDL-----------DNP 751
Query: 425 PALALDLENGMLYYSTEGAE 444
+LALD G +Y++ G +
Sbjct: 752 RSLALDPAKGYMYWTEWGGK 771
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 150/361 (41%), Gaps = 70/361 (19%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + ++V + + GL D +YW D++L+ I + +G+ R + +
Sbjct: 164 IERAGMDGSMRKVIVDTDIYWPNGLTIDLDEQKLYWADAKLSFIHRANLDGSFRQKVVEG 223
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S+ +Y P + +
Sbjct: 224 SLTHPFALTL----AGDTLYWTDWQTRSIHACNKRTGEKRREILSS-LYSPMDIQVFSKE 278
Query: 250 RRVYFADSKLDFID--CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL-KIGKANMDGSNA 306
R+ YF + D + C L + + R+ ++ GV L + GK G++
Sbjct: 279 RQPYFP-TPCDESNGGCSHLCLLSP-------REPFYSCTCPTGVQLTQDGKTCKTGADD 330
Query: 307 SILVSGQL-YEALALDLENGMLYYSTLKCTR------------WLFWTDWGENPRIERIG 353
+L++ + ++LD+ + + R +++WTD E I R
Sbjct: 331 VLLLARRTDLRRISLDMPDFTDIVLQIDDIRHAIAIDYDPVEGYIYWTD-DEVKAIRRAY 389
Query: 354 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL--- 410
+DGS T+++T++ P+G+ +D R +Y+ D+ D I+ +GT R+ +I +L
Sbjct: 390 LDGSGAQTLVTTEVQHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILISENLDEP 449
Query: 411 ---------------------------------MVEFTNDLMGDNGVPALALDLENGMLY 437
MV + L NG LALDL++G LY
Sbjct: 450 RAIVLHPLTGYMYWTDWGENPKIESAYLDGSERMVLVNSSLGWPNG---LALDLQDGKLY 506
Query: 438 Y 438
+
Sbjct: 507 W 507
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 98 GYVL--EYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVS-GLDLVEGL 154
G VL ++D A+N +L +N +E D ++++ S GL L
Sbjct: 1049 GVVLRGDHDKPRAIAVNAERGYLYFTNMQE-RSPKIERAAFDGTEREVLFSTGLIRPVAL 1107
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE D +G NR+ L NI QP G+ + L+W D
Sbjct: 1108 VVDNKLGKLFWVDADLKRIESSDLSGANRVTLEDSNILQPMGLTI----LGDHLYWID-K 1162
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ R T I +I P G+
Sbjct: 1163 QQQMIERVEKTNGIRRTKIQGRIAHPTGI 1191
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 122/308 (39%), Gaps = 30/308 (9%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+V + L D+ +YW D N IE + G R+++A D++ P G+ +
Sbjct: 786 ILVDKVGRANDLTIDYADQRLYWTDLDTNMIESSNMLGAERVIIA-DDLPHPFGL----T 840
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ +++WTDW + IER N T+I + + + + ++R+ D +
Sbjct: 841 QYSDYIYWTDWNLH-SIERADKLNGNNRTLIQDHLDFVMDILVFHSSRQDGLNDCMQNNG 899
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGN--GVPLKIGKANMDGSNASILVSGQLYEALAL 320
C L + Y Y +D P + + +L+ Q + L
Sbjct: 900 HCSQLCLAVPKGYKCSCSSHYTLDSNNRNCSPPSNFLLFSQKTAINRMLLDEQQSPDITL 959
Query: 321 DLE--NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY------WPNG 372
+ + S + ++W D G I+R DG+ ++ST P+
Sbjct: 960 PIHGLRNVKAVSYDPLDKLIYWVD-GRQNIIKRAKDDGTQPFVVVSTPNQSQTPEKQPHD 1018
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVP-ALALDL 431
L++DI + +Y+ + I+ +G V L GD+ P A+A++
Sbjct: 1019 LSIDIYSHTLYWTCEGTNTINANKLNGESIGVV------------LRGDHDKPRAIAVNA 1066
Query: 432 ENGMLYYS 439
E G LY++
Sbjct: 1067 ERGYLYFT 1074
>gi|348569144|ref|XP_003470358.1| PREDICTED: low-density lipoprotein receptor-related protein 6-like
[Cavia porcellus]
Length = 1596
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 115/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 62 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 121
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++
Sbjct: 122 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFVIINTEIYWPNGLTLDYEERKL 179
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 180 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 205
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 206 SLPHPFALTLFEDTLY-----------WTDW 225
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 141/329 (42%), Gaps = 93/329 (28%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI--------- 126
G CS +C + K Y C+C G L + TCK N + L+++ R +
Sbjct: 274 GGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCK--NGATELLLLARRTDLRRISLDTPD 331
Query: 127 ---LVADLEE------------------KGKDHRA-----------QDIVVSGLDLVEGL 154
+V LE+ + RA Q +V + + +G+
Sbjct: 332 FTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGI 391
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++LDP G +++WTDWG
Sbjct: 392 AVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVG--YMYWTDWG 449
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
E P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K D
Sbjct: 450 EIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTD-------------- 495
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
KI N DG+ +LV ++ L +Y
Sbjct: 496 --------------------KIEVMNTDGTGRRVLVEDKIPHIFGFTLLGDYVY------ 529
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ + R II
Sbjct: 530 -----WTDW-QRRSIERVHKRSAEREIII 552
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 91 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 136
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++Y+AD+KL+FI N D
Sbjct: 137 -WTDWGEVPKIERAGMDGSSRFVIINTEIYWPNGLTLDYEERKLYWADAKLNFIHKSNLD 195
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 196 GTNRQAVVKGSLPHPFALTLFED 218
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 573 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 629
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 630 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 689
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 690 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 747
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 748 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 803
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 625 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 684
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 685 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 740
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 741 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 788
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 789 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 819
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 126/310 (40%), Gaps = 78/310 (25%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 874 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 930
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG------- 180
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G
Sbjct: 931 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 986
Query: 181 -------------------------------TNRI-----------VLAKDNITQPRGMM 198
TN I V+ K + +PR ++
Sbjct: 987 VSSVPNQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSIGVVLKGDQDRPRAIV 1046
Query: 199 LDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++P G ++++T+ E +P+IER +DG+ R + + + P L LD ++++ADS
Sbjct: 1047 VNPEKG--YMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADS 1104
Query: 258 KLDFIDCKSLE-----------IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
L I+ L I V + LYWID+ I K +M G
Sbjct: 1105 DLRRIESSDLSGANRIVLEDSNILQPVGLTVFENWLYWIDKQQQ----MIEKIDMTGREG 1160
Query: 307 SILVSGQLYE 316
V ++ +
Sbjct: 1161 RTKVQARIAQ 1170
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 756 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 814
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 815 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 869
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 870 QAGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 929
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 930 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 986
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 987 VSSVPNQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSIGVV------------ 1034
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L GD P A+ ++ E G +Y++
Sbjct: 1035 LKGDQDRPRAIVVNPEKGYMYFT 1057
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 23/150 (15%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
L++ A NA+I+V G L +A A+D G ++W+D E I+R
Sbjct: 14 LRLVDATNGKENATIVVGG-LEDAAAVDFVFGH---------GLIYWSDVSEEA-IKRTE 62
Query: 354 MDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 63 FNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL-- 120
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 121 ---------DQPRAIALDPSSGFMYWTDWG 141
>gi|395850491|ref|XP_003797819.1| PREDICTED: low-density lipoprotein receptor-related protein 6
isoform 2 [Otolemur garnettii]
Length = 1568
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 115/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++
Sbjct: 139 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFVIINTEIYWPNGLTLDYEERKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 223 SLPHPFALTLFEDTLY-----------WTDW 242
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 394 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 454 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYEESKIYWGDAKT 511
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 512 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 537
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 538 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREIII 569
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFVIINTEIYWPNGLTLDYEERKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 395 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 472 ERAALDGSDRVVLVNTSLGWPNGLALDYEESKIYWGDAKTDKIEVMNTDGTGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 125/310 (40%), Gaps = 78/310 (25%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG------- 180
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 181 -------------------------------TNRI-----------VLAKDNITQPRGMM 198
TN I V+ K +PR ++
Sbjct: 1004 VSSAPNQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSIGVVLKGEQDRPRAIV 1063
Query: 199 LDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++P G ++++T+ E +P+IER +DG+ R + + + P L LD ++++ADS
Sbjct: 1064 VNPEKG--YMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADS 1121
Query: 258 KLDFIDCKSLE-----------IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
L I+ L I V + LYWID+ I K +M G
Sbjct: 1122 DLRRIESSDLSGANRIVLEDSNILQPVGLTVFENWLYWIDKQQQ----MIEKIDMTGREG 1177
Query: 307 SILVSGQLYE 316
V ++ +
Sbjct: 1178 RTKVQARIAQ 1187
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 123/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QAGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSAPNQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSIGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 23/150 (15%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
L++ A NA+I+V G L +A A+D G ++W+D E I+R
Sbjct: 31 LRLVDATNGKENATIVVGG-LEDAAAVDFVFGH---------GLIYWSDVSEEA-IKRTE 79
Query: 354 MDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 80 FNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL-- 137
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 ---------DQPRAIALDPSSGFMYWTDWG 158
>gi|149713736|ref|XP_001501348.1| PREDICTED: low-density lipoprotein receptor-related protein 6
isoform 1 [Equus caballus]
Length = 1613
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 115/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++
Sbjct: 139 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFIIINTEIYWPNGLTLDYEERKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 223 SLPHPFALTLFEDTLY-----------WTDW 242
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 394 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 454 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKT 511
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 512 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 537
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 538 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREIII 569
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFIIINTEIYWPNGLTLDYEERKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPLEG--YIYWTD-DEVRAIRRSFIDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 395 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 472 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPNQNLEIQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRSIGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPIALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QAGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSVPNQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSIGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 23/150 (15%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
L++ A NA+I+V G L +A A+D G ++W+D E I+R
Sbjct: 31 LRLVDATNGKENATIVVGG-LEDAAAVDFVFGH---------GLIYWSDVSEEA-IKRTE 79
Query: 354 MDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 80 FNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL-- 137
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 ---------DQPRAIALDPSSGFMYWTDWG 158
>gi|403301193|ref|XP_003941281.1| PREDICTED: low-density lipoprotein receptor-related protein 5
[Saimiri boliviensis boliviensis]
Length = 1652
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 126/244 (51%), Gaps = 48/244 (19%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + L+
Sbjct: 137 QNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALN 196
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWGE PRIER GMDGS R+ I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 197 PAHG--YMYWTDWGEMPRIERAGMDGSTRNIIVDSDIYWPNGLTIDLEEQKLYWADAKLS 254
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
FI +AN+DGS +V G L AL
Sbjct: 255 FIH----------------------------------RANLDGSFRQKVVEGSLTHPFAL 280
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L LY WTDW G R I+S +Y P + + R
Sbjct: 281 TLSGDTLY-----------WTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQER 328
Query: 381 RVYF 384
+ +F
Sbjct: 329 QPFF 332
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 149/344 (43%), Gaps = 71/344 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKG 89
C+ G CS+ C +P+ C CP G L ++ TC+ E+ ++ +
Sbjct: 335 RCEEDNGGCSHLCLLSPVEPFYTCACPTGVQLQDNGRTCK--AGAEEVLLLARRTDLRRI 392
Query: 90 SYICSCNEGYVLEYDNHTCKAINHSAA----------FLIISNRHSILVADLEEKGKDHR 139
S VL+ D+ I H+ A + +I A L+ G
Sbjct: 393 SLDTPDFTDIVLQVDD-----IRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSG---- 443
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ ++ + ++ +G+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR + L
Sbjct: 444 AQTLINTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIAL 503
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G ++WTDWGENP+IE +DG R +++ + WPNGL LD+ ++Y+ D+K
Sbjct: 504 HPVMGL--MYWTDWGENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYWGDAKT 561
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N+DG+ L+ +L
Sbjct: 562 D----------------------------------KIEVINVDGTKRRTLLEDKLPHIFG 587
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ ++R II
Sbjct: 588 FTLLGDFIY-----------WTDW-QRRSIERVHKVKASRDIII 619
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 85/144 (59%), Gaps = 13/144 (9%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRW 337
+ +KLYW D N +I AN++G++ +L L + A+ L Y
Sbjct: 155 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALNPAHGY--------- 201
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
++WTDWGE PRIER GMDGS R+ I+ + IYWPNGLT+D+ +++Y+AD+KL FI N
Sbjct: 202 MYWTDWGEMPRIERAGMDGSTRNIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANL 261
Query: 398 DGTGRQQVILIDLMVEFTNDLMGD 421
DG+ RQ+V+ L F L GD
Sbjct: 262 DGSFRQKVVEGSLTHPFALTLSGD 285
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 148/349 (42%), Gaps = 95/349 (27%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE 132
E G CS +C + + Y C+C G L+ + TCKA + L+++ R
Sbjct: 338 EDNGGCSHLCLLSPVEPFYTCACPTGVQLQDNGRTCKA--GAEEVLLLARR--------- 386
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
+ L RI + + T+ IVL D+I
Sbjct: 387 -----------------------------------TDLRRISLDTPDFTD-IVLQVDDIR 410
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
+ DP G +++WTD E I R +DGS T+I+T+I P+G+ +D
Sbjct: 411 HAIAIDYDPLEG--YVYWTD-DEVRAIRRAYLDGSGAQTLINTEINDPDGIAVDW----- 462
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+ R LYW D G + +I ++G++ ILVS
Sbjct: 463 -------------------------VARNLYWTDTGTD----RIEVTRLNGTSRKILVSE 493
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
L E A+ L M ++WTDWGENP+IE +DG R +++ + WPNG
Sbjct: 494 DLDEPRAIALHPVMGL---------MYWTDWGENPKIECANLDGQERRVLVNASLGWPNG 544
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
L LD+ ++Y+ D+K D I+ N DGT R+ ++ L F L+GD
Sbjct: 545 LALDLQEGKLYWGDAKTDKIEVINVDGTKRRTLLEDKLPHIFGFTLLGD 593
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 108/237 (45%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C ++ G CS +C T S C C G L D TC AFL+ ++R +I
Sbjct: 640 NPCADENGGCSHLCFFTPHSTRCGCPIGLELLSDMKTCIV---PEAFLVFTSRAAIHRIS 696
Query: 131 LEEKGKD----------------------------------------HRAQDIVVSGLDL 150
LE D + +V GLD
Sbjct: 697 LETNNNDVAIPLTGVKEASALDFDVANNHIYWTDVSLKTISRAFLNGSSVEHVVEFGLDY 756
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR + LDP+ G +++W
Sbjct: 757 PEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTEG--YIYW 814
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG PRI R MDG+N T++ K+ N LT+D +R+Y+ D + I+ ++
Sbjct: 815 TEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYTDQRLYWTDLDTNMIESSNM 870
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 138/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ C F
Sbjct: 928 DILVFHSSRQDGLNDCVHDNGQCGQLCLAIPGGHRCGCASHYTLDPSGRNCSP---PTTF 984
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+++ GL V+ + YD + IYW+D R N I
Sbjct: 985 LLFSQKSAISRMIPD------DQHSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQN-I 1037
Query: 174 EVCDENGTNRIVL-----AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT VL A++ QP + +D +R LFWT N I + G
Sbjct: 1038 KRAKDDGTQPFVLTSLSQAQNPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLSGEA 1094
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1095 MGVVLRGDRDKPRAIIVNAERGYLYFTNMQ---------------------------DRA 1127
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A +DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1128 A-----KIERAALDGTEREVLFTTGLIRPVALVVDNALGK---------LFWAD-ADLKR 1172
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT + + +Y+ D + I+
Sbjct: 1173 IESCDLSGANRLTLEDANIVQPLGLT--VLGKHLYWIDRQQQMIE 1215
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D+A +Y+ D L F++ S+E ++
Sbjct: 692 IHRISLETNNNDVAIPLTGVKEASALDFDVANNHIYWTDVSLKTISRAFLNGSSVEHVVE 751
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 752 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 807
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D +R+
Sbjct: 808 TEGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYTDQRL 855
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ N G+++V++ D
Sbjct: 856 YWTDLDTNMIESSNM--LGQERVVIAD 880
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 147/359 (40%), Gaps = 66/359 (18%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D ++I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 213 IERAGMDGSTRNIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 272
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 273 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQE 327
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG----------- 297
R+ +F + D C L + + V + NG K G
Sbjct: 328 RQPFFHTRCEEDNGGCSHLCLLSPVEPFYTCACPTGVQLQDNGRTCKAGAEEVLLLARRT 387
Query: 298 ---KANMDGSNAS--ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+ ++D + + +L + A+A+D Y L+ +++WTD E I R
Sbjct: 388 DLRRISLDTPDFTDIVLQVDDIRHAIAID-------YDPLE--GYVYWTD-DEVRAIRRA 437
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL-- 410
+DGS T+I+T+I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 438 YLDGSGAQTLINTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDE 497
Query: 411 ----MVEFTNDLM-----GDN---------------------GVP-ALALDLENGMLYY 438
+ LM G+N G P LALDL+ G LY+
Sbjct: 498 PRAIALHPVMGLMYWTDWGENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYW 556
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N +L +N A +E D ++++ +GL L
Sbjct: 1096 GVVLRGDRDKPRAIIVNAERGYLYFTNMQD-RAAKIERAALDGTEREVLFTTGLIRPVAL 1154
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W D+ L RIE CD +G NR+ L NI QP G+ + + L+W D
Sbjct: 1155 VVDNALGKLFWADADLKRIESCDLSGANRLTLEDANIVQPLGLTV----LGKHLYWID-R 1209
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T + ++ G+
Sbjct: 1210 QQQMIERVEKTTGDKRTRVQGRVTHLTGI 1238
>gi|354500299|ref|XP_003512238.1| PREDICTED: low-density lipoprotein receptor-related protein 1B,
partial [Cricetulus griseus]
Length = 1957
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 141/294 (47%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +CD + DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 339 RCIPSGGLCDSRDDCGDGSDE-RNCHINECLSKKVSGCSQDCQDLPVSYKCKCWPGFQLK 397
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C EGY + DN C++++ FLI++
Sbjct: 398 DDGKTCVDIDECSSGFPCSQQCINTYGTYKCHCAEGYETQPDNQNGCRSLSDEEPFLILA 457
Query: 122 NRHSI--------------------LVADLE-----------EKGKDHRAQDIVVSGLDL 150
++H I + D + + R + ++G D+
Sbjct: 458 DQHEIRKISTDGSNYTLLKQGLNNVIAIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDI 517
Query: 151 --------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
LA DWIG ++YW D+ IEV NG VL + PR + LDP
Sbjct: 518 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTVLVSKRLKFPRDLSLDPQ 577
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +L+W D E P I R+GMDG+N+S +I TKI P LT+D R+Y+AD
Sbjct: 578 AG--YLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYINHRLYWAD 629
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 135/327 (41%), Gaps = 74/327 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLA----ECKHKFGLCSNT--CHPTPLGALCTCPPG 58
C+ + CDG DC +G+DE GC + C+ C + C+ C C PG
Sbjct: 1211 CIPMELQCDGLDDCGDGSDE-QGCTKSISEHTCEKNGNPCGDDAYCNQIKTSVFCRCKPG 1269
Query: 59 EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL 118
+ C+D+NEC G CSQ C NT+GSY C C++ + + N++C A L
Sbjct: 1270 FRRNMKGRQCEDLNECLVFGVCSQHCVNTQGSYKCVCDQNF--QEKNNSCIAKGSEDQAL 1327
Query: 119 IISNRHSIL--------------VADLEEKGK---------------------------- 136
I+N IL ++ +E +
Sbjct: 1328 YIANDTDILGFVYPFNYSGGHQQISHVEHNSRITGMDVYYERNVIVWSTQFNPGGIFYKM 1387
Query: 137 -DHRAQDIVVSGLDLVE-----GLAYDWIGGHIYWLD-SRLN--------------RIEV 175
D R + SGL E +A DW+ G+IYW D SR++ I V
Sbjct: 1388 IDGREKRQSNSGLICPEFKRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSINV 1447
Query: 176 CDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST 235
NG N L + +P + ++P G ++WT G++ IE MDG+ R ++
Sbjct: 1448 GQLNGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVIGDHSHIEEAAMDGTLRRILVQK 1505
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GLT+D R+Y+AD +L I
Sbjct: 1506 NLQRPTGLTVDHFGERIYWADFELSII 1532
>gi|444518878|gb|ELV12445.1| Low-density lipoprotein receptor-related protein 6, partial [Tupaia
chinensis]
Length = 1580
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 115/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 66 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 125
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++
Sbjct: 126 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFIIINTEIYWPNGLTLDYEERKL 183
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 184 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 209
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 210 SLPHPFALTLFEDTLY-----------WTDW 229
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V S + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 361 SQFVVTSQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 420
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 421 DPMVG--YMYWTDWGEIPKIERAALDGSDRIVLVNTSLGWPNGLALDYDEGKIYWGDAKT 478
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 479 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 504
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 505 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREVII 536
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 95 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 140
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++Y+AD+KL+FI N D
Sbjct: 141 -WTDWGEVPKIERAGMDGSSRFIIINTEIYWPNGLTLDYEERKLYWADAKLNFIHKSNLD 199
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 200 GTNRQAVVKGSLPHPFALTLFED 222
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 557 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 613
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 614 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 673
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 674 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 731
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 732 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 787
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 124/252 (49%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 306 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGS 361
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++++I P+G+ +D + R LYW D G
Sbjct: 362 QFVVTSQIAHPDGIAVDW------------------------------VARNLYWTDTGT 391
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 392 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 438
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 439 ERAALDGSDRIVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDK 498
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 499 IPHIFGFTLLGD 510
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 609 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 668
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 669 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 724
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 725 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 772
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 773 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 803
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 858 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 914
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 915 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 970
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 971 VSSVPNQNLEIQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRSIGLVLKGEQDRPR 1027
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1028 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1055
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1056 DGTEREVLFFSGLSKPIALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1105
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1106 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1158
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 127/323 (39%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 740 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 798
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 799 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 853
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 854 QAGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 913
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 914 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 970
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG + + L+
Sbjct: 971 VSSVPNQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDG---RSIGLV--------- 1018
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1019 LKGEQDRPRAIVVNPEKGYMYFT 1041
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 23/150 (15%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
L++ A NA+I+V G L +A A+D G ++W+D E I+R
Sbjct: 18 LRLVDATNGKENATIVVGG-LEDAAAVDFVFGH---------GLIYWSDVSEEA-IKRTE 66
Query: 354 MDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 67 FNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL-- 124
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 125 ---------DQPRAIALDPSSGFMYWTDWG 145
>gi|345781659|ref|XP_532820.3| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Canis lupus familiaris]
Length = 2029
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 162/341 (47%), Gaps = 65/341 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCD--LAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L VCDGK DC +G+DEG C L+ C CS+TC+ +P G +C C G L
Sbjct: 1047 CLDLRLVCDGKEDCADGSDEGGKCSSLLSACSQ--APCSHTCYLSPRGPVCACERGFELE 1104
Query: 63 NDSVTCQDMNECEQPG--YCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
+ C+D++EC++ G CSQ C NT+GSY C+C GY LE D HTCKA L+
Sbjct: 1105 SSGQVCKDVDECQKSGGQPCSQTCVNTQGSYSCTCQPGYSLEPDGHTCKATGIEPILLVA 1164
Query: 121 SNRHSIL--VADLEEK------------------------------------GKDHRAQD 142
+ +L + L+E D R
Sbjct: 1165 VQSNLLLYGLRSLKEDVLATVDKNVMIFSIDYDLVGQKVFWTDLSAESIKWISMDTRRTG 1224
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI------EVCDENGTNRIVLAKDNITQPRG 196
VV G+ + + DWIG ++YW+D +I V + IVL +D +TQP+
Sbjct: 1225 TVVKGIK-SDCIVVDWIGRNLYWVDGTAGQILAIQLTAVWRGKSEHTIVLDED-LTQPQS 1282
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ LDP G ++W++ G P+I + GMDGS R +IS + P +TLD ++R++++D
Sbjct: 1283 LALDPLNGL--MYWSEIGGEPQIAQAGMDGSGRKILISQSLGQPTSVTLDQLSQRIFWSD 1340
Query: 257 SKLDFIDCKSL-----------EIKTNVNYSTIFRKLYWID 286
K I +L +IK + + +++W D
Sbjct: 1341 YKFHCIGSANLDGTGVHILQLTQIKNPFSVAVFEDEVFWSD 1381
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 126/488 (25%), Positives = 204/488 (41%), Gaps = 92/488 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C+ + VCDG+ DC +G DE C C G C C T G C+C G L
Sbjct: 214 KCIPESLVCDGEADCRDGTDEPATCG-KNCSLANGGCEGQCSVTTWGVQCSCGAGWQLQP 272
Query: 64 DSVTCQDMNECEQP-GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D +C D++EC G C Q+C N GSY C+C +GY L Y+ +C+ + + LI +
Sbjct: 273 DGQSCADIDECSLAYGPCGQLCRNVPGSYSCACIQGYQL-YNGTSCRVTDGAVKILIAAE 331
Query: 123 RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS--RLNRIEVCDENG 180
L V+ ++ DW+ G +YW S R+ + D G
Sbjct: 332 -------------------------LKTVDSISLDWLTGQLYWASSFARVICAGLSDGRG 366
Query: 181 TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN--PRIERIGMDGSNRSTIISTKIY 238
RI L KD + P +++ P+ + L+W + G+ IE GMDGS+R + + +
Sbjct: 367 YVRI-LEKDLV--PEQLIVFPT--KKSLYWVNRGKKGMRTIEAAGMDGSDRKVLAAVNVE 421
Query: 239 WPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIF-------------RKLYWI 285
P GLTLD R+Y+ + I+ +++ + +F +W
Sbjct: 422 EPVGLTLDHVAGRLYWISEYKESIETVNVDGSGRHTFPEVFLEDDNPIGLAVFENSFFW- 480
Query: 286 DEGGNGVPL-----KIGKANMDGSNASILVSGQLYE-------ALALDLENGMLYYSTLK 333
N + L + K + NASI L++ + ++D+ G LY+ L
Sbjct: 481 ---ANKIQLFHTSPHVPKERVILLNASISAFSVLHKSQQPKVCSASVDIATGNLYW--LP 535
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
C R I++ + G++ T+ T + L LD R +Y+ +S
Sbjct: 536 CDR----------SAIQKTRVTGADTQTLYRTGGIILH-LLLDWPKRVLYWVESGKHLQS 584
Query: 394 FCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKTPLFCI 453
G RQQV M +T D +ALDL + + ++T+G+ L
Sbjct: 585 M-TLAGKNRQQV----WMGTWTADTH-------MALDLGSSSILWTTKGSGLQSLSLL-K 631
Query: 454 TRNYFLDQ 461
R Y L++
Sbjct: 632 NRTYTLNK 639
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 14/148 (9%)
Query: 278 IFRKLYWID-EGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKC 334
I R LYW+D G + +++ S +I++ L + +LALD NG++Y
Sbjct: 1240 IGRNLYWVDGTAGQILAIQLTAVWRGKSEHTIVLDEDLTQPQSLALDPLNGLMY------ 1293
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDF 394
W++ G P+I + GMDGS R +IS + P +TLD ++R++++D K I
Sbjct: 1294 -----WSEIGGEPQIAQAGMDGSGRKILISQSLGQPTSVTLDQLSQRIFWSDYKFHCIGS 1348
Query: 395 CNYDGTGRQQVILIDLMVEFTNDLMGDN 422
N DGTG + L + F+ + D
Sbjct: 1349 ANLDGTGVHILQLTQIKNPFSVAVFEDE 1376
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 101/243 (41%), Gaps = 24/243 (9%)
Query: 40 CSNTCHPTPLG-ALCTCPPGEILSNDSVTCQDMNECE-----QPGYCSQMCTNTKGSYI- 92
CS+ C +P C CP G +L++D +TC + E P Q+ + +
Sbjct: 1434 CSHLCLLSPRSKGSCHCPVGLLLADDGITCVPLEESAFLFLALPTGVMQIYLKNLEALLG 1493
Query: 93 -CSCNEGYVLEYDNHTCKA-----INHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVS 146
+ E +L + N A + A +L I + L+E G + + V
Sbjct: 1494 QPTLPEHRILPFTNVNQLASLDYIVQEKALYLSELGNRDIRLLRLKESGSLSWRKILSVE 1553
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTR 206
G V LA DW+ G+IYW+DS I V G VL +N+ P ++L P
Sbjct: 1554 GT--VIDLAVDWLSGNIYWIDSENPHINVASSKGQYPTVLFSENLYHPTSVVLHPPSAV- 1610
Query: 207 WLFWTDWGEN------PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
+ + D G IE MDGS R ++ + P GLT + RVY+AD+
Sbjct: 1611 -MCFVDLGSQDDSRRGSSIECASMDGSRRK-MLWQRSQVPEGLTFSDSGTRVYWADTGRG 1668
Query: 261 FID 263
I+
Sbjct: 1669 LIE 1671
>gi|291414229|ref|XP_002723367.1| PREDICTED: low density lipoprotein receptor-related protein 5
[Oryctolagus cuniculus]
Length = 712
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 138/289 (47%), Gaps = 61/289 (21%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q++V+SGL +GLA DW+G +YW DS NRIEV + NG++R VL ++ QPR + LD
Sbjct: 71 QNVVISGLVAPDGLACDWVGKKLYWTDSETNRIEVANLNGSSRRVLFWQDLDQPRAIALD 130
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 131 PAHG--YMYWTDWGETPRIERAGMDGSWRKVIVDSDIYWPNGLTIDLEEQKLYWADAKLS 188
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
FI +AN+DGS +V G L AL
Sbjct: 189 FIH----------------------------------RANLDGSFRQKVVEGSLTHPFAL 214
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L LY WTDW G R I+S +Y P +DI
Sbjct: 215 TLSGDTLY-----------WTDWQTRSIHACNKRTGEKRKEILSA-LYSP----MDI--- 255
Query: 381 RVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF------TNDLMGDNG 423
+V + + C D G + L+ F T + DNG
Sbjct: 256 QVLSQERQPSLHTRCEEDNGGCSHLCLLSPREPFYACACPTGVQLQDNG 304
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 48/218 (22%)
Query: 208 LFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKS 266
++WTD E + + G+ ++ + + P+GL D +++Y+ DS+ +
Sbjct: 48 VYWTDVSEEAIKQTYLNQSGAAVQNVVISGLVAPDGLACDWVGKKLYWTDSETN------ 101
Query: 267 LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLEN 324
+I AN++GS+ +L L + A+ALD +
Sbjct: 102 ----------------------------RIEVANLNGSSRRVLFWQDLDQPRAIALDPAH 133
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384
G +Y W W GE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+
Sbjct: 134 GYMY--------WTDW---GETPRIERAGMDGSWRKVIVDSDIYWPNGLTIDLEEQKLYW 182
Query: 385 ADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
AD+KL FI N DG+ RQ+V+ L F L GD
Sbjct: 183 ADAKLSFIHRANLDGSFRQKVVEGSLTHPFALTLSGDT 220
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 67/141 (47%), Gaps = 26/141 (18%)
Query: 305 NASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRST 361
++++VSG L +A A+D + G +Y WTD E + + G+
Sbjct: 25 ESTVVVSG-LEDAAAVDFQFSRGAVY-----------WTDVSEEAIKQTYLNQSGAAVQN 72
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++ + + P+GL D +++Y+ DS+ + I+ N +G+ R+ + DL
Sbjct: 73 VVISGLVAPDGLACDWVGKKLYWTDSETNRIEVANLNGSSRRVLFWQDL----------- 121
Query: 422 NGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 122 DQPRAIALDPAHGYMYWTDWG 142
>gi|432959446|ref|XP_004086294.1| PREDICTED: low-density lipoprotein receptor-related protein 5-like
[Oryzias latipes]
Length = 1571
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 126/244 (51%), Gaps = 48/244 (19%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q +VV GLD +GLA DW+ +YW DS NRIEV + NGT+R VL ++ QPR + L+
Sbjct: 97 QIVVVPGLDSPDGLACDWLSKKLYWTDSETNRIEVANLNGTSRKVLFWMDLDQPRAIALN 156
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ R+++WTDWGE PRIER GMDGS R I++ I+WPNGLT+D+ +++Y+AD+KL
Sbjct: 157 PA--QRYMYWTDWGEEPRIERAGMDGSRREVIVNEDIFWPNGLTVDLEEQKLYWADAKLS 214
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
FI +AN+DGS +V G L AL
Sbjct: 215 FIH----------------------------------RANLDGSAREAVVEGTLTHPFAL 240
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L N LFWTDW + I +++ I IY P G+ + + R
Sbjct: 241 TLSNET-----------LFWTDW-QTHSIHACNKHRGDKTREILGGIYSPMGIQVLESYR 288
Query: 381 RVYF 384
+ Y
Sbjct: 289 QPYI 292
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 148/339 (43%), Gaps = 63/339 (18%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C G CS+ C P P CTCP G L D TC+ EQ ++ + S
Sbjct: 296 CSDNNGGCSHLCLLSPVPPFYSCTCPTGVQLRADGKTCKP--GAEQVLLLARRTDLRRIS 353
Query: 91 YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD------IV 144
VL+ D I H+ A + D E + D +V
Sbjct: 354 LDLPDFTDIVLQVD-----GIRHAIAIDYDPVEGYVYWTDDEVRAIRRSRLDGSNAVMLV 408
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ ++ +G+A DW+ ++YW D+ +RIEV NGT+R +L +N+ +PR ++LDP G
Sbjct: 409 TTEINHPDGIAVDWVSRNLYWTDTGTDRIEVTRLNGTSRKILISENLDEPRAIVLDPVNG 468
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
++FW+DWGE P+IER +DG++R +++T + WPNGL LD AT ++Y+ D+K D
Sbjct: 469 --YMFWSDWGERPKIERANLDGTDRLVLLNTSLGWPNGLALDYATGKLYWGDAKTD---- 522
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
KI N+DG+ L+ +L L
Sbjct: 523 ------------------------------KIEVINVDGTGRKTLLEDKLPHIFGFTLLG 552
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+Y WTDW + IER+ + R II
Sbjct: 553 DYIY-----------WTDW-QRRSIERVHKVTAVREIII 579
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 121/240 (50%), Gaps = 50/240 (20%)
Query: 184 IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
IVL D I + DP G +++WTD E I R +DGSN +++T+I P+G+
Sbjct: 362 IVLQVDGIRHAIAIDYDPVEG--YVYWTD-DEVRAIRRSRLDGSNAVMLVTTEINHPDGI 418
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
+D +R LYW D G + +I ++G
Sbjct: 419 AVDWVSR------------------------------NLYWTDTGTD----RIEVTRLNG 444
Query: 304 SNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
++ IL+S L E A+ LD NG ++FW+DWGE P+IER +DG++R
Sbjct: 445 TSRKILISENLDEPRAIVLDPVNG-----------YMFWSDWGERPKIERANLDGTDRLV 493
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+++T + WPNGL LD AT ++Y+ D+K D I+ N DGTGR+ ++ L F L+GD
Sbjct: 494 LLNTSLGWPNGLALDYATGKLYWGDAKTDKIEVINVDGTGRKTLLEDKLPHIFGFTLLGD 553
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 88/160 (55%), Gaps = 26/160 (16%)
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLF 339
+KLYW D N +I AN++G++ +L L + A+ L R+++
Sbjct: 117 KKLYWTDSETN----RIEVANLNGTSRKVLFWMDLDQPRAIALNPAQ---------RYMY 163
Query: 340 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
WTDWGE PRIER GMDGS R I++ I+WPNGLT+D+ +++Y+AD+KL FI N DG
Sbjct: 164 WTDWGEEPRIERAGMDGSRREVIVNEDIFWPNGLTVDLEEQKLYWADAKLSFIHRANLDG 223
Query: 400 TGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYS 439
+ R+ V+ L F AL L N L+++
Sbjct: 224 SAREAVVEGTLTHPF-------------ALTLSNETLFWT 250
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 111/236 (47%), Gaps = 52/236 (22%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----------- 126
G CS +C + + C+C G L D TC AFL+ +NR SI
Sbjct: 607 GGCSHLCFWRRRAVSCACPMGMELLPDLQTCVV---PEAFLLFTNRDSIRSISLGTNSND 663
Query: 127 -------------LVADLEEKG---KDHRAQDI-------------VVSGLDLVEGLAYD 157
L D+ EK D +A+ I + GLD EG+A D
Sbjct: 664 VAIPLTGIKEASALDFDVSEKRIYWTDIQAKTISRAYMNGSSVEHVIEFGLDYPEGMAVD 723
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNRIVLA-KD-----NITQPRGMMLDPSPGTRWLFWT 211
W+G +IYW D+ NRIEV +G R VL KD ++ PR + LDP+ G +++WT
Sbjct: 724 WMGHNIYWADTGTNRIEVARLDGQYRQVLVCKDLDNPRSLDNPRSLALDPANG--FMYWT 781
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
+WG PRI R MDGS +T++ K+ NGLT+D R+Y+ D I+ ++
Sbjct: 782 EWGGLPRIARAYMDGSIITTLVE-KVGRANGLTIDYVDHRLYWTDLDTYMIESSNM 836
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 135/306 (44%), Gaps = 39/306 (12%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D+ G +YW D++ ++IEV + +GT R L +D + G L +++WTD
Sbjct: 504 GLALDYATGKLYWGDAKTDKIEVINVDGTGRKTLLEDKLPHIFGFTL----LGDYIYWTD 559
Query: 213 WGENPRIERIGMDGSNRSTIIS-------------TKIYWPNGLTLDIA--TRRVYFADS 257
W + IER+ + R II T+ + NG ++ + ++
Sbjct: 560 W-QRRSIERVHKVTAVREIIIDQLPDLMGLKATKVTETHGTNGCAVENGGCSHLCFWRRR 618
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
+ +E+ ++ + + + +G + ++ +I ++G + EA
Sbjct: 619 AVSCACPMGMELLPDLQTCVVPEAFLLFTNRDSIRSISLG---TNSNDVAIPLTG-IKEA 674
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
ALD + + ++WTD + I R M+GS+ +I + +P G+ +D
Sbjct: 675 SALDFD---------VSEKRIYWTDI-QAKTISRAYMNGSSVEHVIEFGLDYPEGMAVDW 724
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLY 437
+Y+AD+ + I+ DG RQ ++ DL N DN +LALD NG +Y
Sbjct: 725 MGHNIYWADTGTNRIEVARLDGQYRQVLVCKDL----DNPRSLDNPR-SLALDPANGFMY 779
Query: 438 YSTEGA 443
++ G
Sbjct: 780 WTEWGG 785
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 92/201 (45%), Gaps = 37/201 (18%)
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IKTNVNYST-- 277
SN I T I + L D++ +R+Y+ D + +++ S+E I+ ++Y
Sbjct: 661 SNDVAIPLTGIKEASALDFDVSEKRIYWTDIQAKTISRAYMNGSSVEHVIEFGLDYPEGM 720
Query: 278 ----IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--------YEALALDLENG 325
+ +YW D G N +I A +DG +LV L +LALD NG
Sbjct: 721 AVDWMGHNIYWADTGTN----RIEVARLDGQYRQVLVCKDLDNPRSLDNPRSLALDPANG 776
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
+Y WT+WG PRI R MDGS +T++ K+ NGLT+D R+Y+
Sbjct: 777 FMY-----------WTEWGGLPRIARAYMDGSIITTLVE-KVGRANGLTIDYVDHRLYWT 824
Query: 386 DSKLDFIDFCNYDGTGRQQVI 406
D I+ N G R+ V+
Sbjct: 825 DLDTYMIESSNMLGLQREIVV 845
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 132/343 (38%), Gaps = 66/343 (19%)
Query: 59 EILSNDSVTCQDMNECE-QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S NEC G C+ +C T C C Y L D C + ++F
Sbjct: 895 DILVFHSSRQDGTNECSLNNGDCAHLCLATPTGAQCRCTSHYTLNPDGRNCSS---PSSF 951
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLA--YDWIGGHIYWLDSRLNRIEV 175
L+ + ++SI L E+ D ++ + +V+ A YD + IYWLD R N
Sbjct: 952 LLFTQKNSISRMVLGEQSPD------IILPIHVVKARAVHYDPVDRLIYWLDGRQNIRRA 1005
Query: 176 CDENGTNRIVLAKDNITQP-----RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS 230
D+ + ++ + QP + LDP +R ++WT N I MDG
Sbjct: 1006 RDDGAM--VTTSQPDTAQPVENQLHDLSLDPY--SRHVYWTCENTN-TINVQRMDGHTVG 1060
Query: 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN 290
++ P + ++ +YF T V +
Sbjct: 1061 VVVKDNTDKPRAIVVNAERGYMYF----------------TTVQERSA------------ 1092
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
KI A++DG+ L + L +AL L+N + LFW D + RIE
Sbjct: 1093 ----KIEGASLDGTERESLFTTGLIRPVALALDNKLGK---------LFWID-ADLKRIE 1138
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
+ G+NR + + I P GLT + +Y+ D + I+
Sbjct: 1139 SSDLTGANRVVLQDSNILQPMGLT--VLGEHLYWIDRQQQMIE 1179
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ + +GL LA D G ++W+D+ L RIE D G NR+VL NI QP G+ +
Sbjct: 1105 ESLFTTGLIRPVALALDNKLGKLFWIDADLKRIESSDLTGANRVVLQDSNILQPMGLTV- 1163
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
L+W D + IER+ +R T + +I
Sbjct: 1164 ---LGEHLYWID-RQQQMIERVDKLTGDRRTRVQGRI 1196
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 18/132 (13%)
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDLENGMLYYSTLKCTRW 337
R +YW E N + ++ MDG ++V A+ ++ E G +Y++T++
Sbjct: 1037 RHVYWTCENTNTINVQ----RMDGHTVGVVVKDNTDKPRAIVVNAERGYMYFTTVQ---- 1088
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
+ +IE +DG+ R ++ +T + P L LD ++++ D+ L I+ +
Sbjct: 1089 ------ERSAKIEGASLDGTERESLFTTGLIRPVALALDNKLGKLFWIDADLKRIE--SS 1140
Query: 398 DGTGRQQVILID 409
D TG +V+L D
Sbjct: 1141 DLTGANRVVLQD 1152
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 36/182 (19%)
Query: 280 RKLYW--IDEGGNGVPLKIGKANMD--------GSNASILVSGQLYEALALDL--ENGML 327
R L W + G+G PL + D S +V L +A A+D G++
Sbjct: 8 RLLLWSCLLSAGSGSPLLLFANRRDVRLVDGEGPRGESAIVVSDLEDAAAVDFFFAEGLI 67
Query: 328 YYS-----TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+++ +K TRW + N E +G D ++ + P+GL D ++++
Sbjct: 68 FWTDVSEEAIKQTRW----NQSSNSLKESLGTD----QIVVVPGLDSPDGLACDWLSKKL 119
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
Y+ DS+ + I+ N +GT R+ + +DL + A+AL+ +Y++ G
Sbjct: 120 YWTDSETNRIEVANLNGTSRKVLFWMDL-----------DQPRAIALNPAQRYMYWTDWG 168
Query: 443 AE 444
E
Sbjct: 169 EE 170
>gi|281346318|gb|EFB21902.1| hypothetical protein PANDA_004061 [Ailuropoda melanoleuca]
Length = 2333
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 144/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +CD K DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 636 RCIPSGGLCDNKDDCGDGSDER-NCHINECLSKKVSGCSQDCQDLPVSYKCKCWPGFQLK 694
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C +GY ++ DN + CK+++ FLI++
Sbjct: 695 DDGKTCVDIDECSLGFPCSQQCINTYGTYKCLCTDGYEIQPDNPNGCKSLSDEEPFLILA 754
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
+ H I L ++G D+R + I
Sbjct: 755 DHHEIRKISTDGSNYTLLKQGLNNVIGIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDI 814
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG +L + PR + LDP
Sbjct: 815 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTILVSKRLKFPRDLSLDPR 874
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +L+W D E P I R+GMDG+N+S +I TKI P LT+D +R+Y+AD
Sbjct: 875 AG--YLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNQRLYWAD 926
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 133/328 (40%), Gaps = 74/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSNT--CHPTPLGALCTCPP 57
+C+ + CD DC +G+DE GC + C+ C + C+ C C P
Sbjct: 1507 KCIPMDLQCDQFDDCGDGSDE-QGCRITSAEYTCEDNVNPCGDDAYCNQIKTSVFCRCKP 1565
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G + + C+D+NEC G CS C N +GSY C C++ + + N+TC A
Sbjct: 1566 GFQRNMKNRQCEDLNECLVFGTCSHQCINIEGSYKCVCDQNF--QERNNTCIAKGSEDQV 1623
Query: 118 LIISNRHSIL--------------VADLEE------------------------------ 133
L I+N IL ++ +E
Sbjct: 1624 LYIANDTDILGFIYPFNYSGDHQQISHIEHNSRITGMDVYYQRDMIIWSTQFNPGGIFYK 1683
Query: 134 --KGKDHRAQD--IVVSGLDLVEGLAYDWIGGHIYWLD-SRLN--------------RIE 174
G++ R + ++ +A DW+ G+IYW D SR++ I
Sbjct: 1684 MIHGREKRQANSGLICPEFKRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSIN 1743
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V NG N L + +P + ++P G ++WT G++ IE MDG+ R ++
Sbjct: 1744 VGQLNGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVIGDHSHIEEAAMDGTLRRILVQ 1801
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D + R+Y+AD +L I
Sbjct: 1802 KNLQRPTGLAVDHFSERIYWADLELSVI 1829
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G N ++ST I PNGLT+D ++YF+D L
Sbjct: 61 ECQNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDHRAEKLYFSDGSLGK 120
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 121 IERCEYDGSQRHVIV 135
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 158/426 (37%), Gaps = 81/426 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGP-GCDLA----ECKHKFGLCSNTCHPTPLGALCT----C 55
C+ ++C+G DC + +DE G L CK CSN P+ C C
Sbjct: 1463 CLQPEQMCNGIDDCGDNSDEDHCGGKLTYKARPCKKDEFACSNK-KCIPMDLQCDQFDDC 1521
Query: 56 PPGE-----ILSNDSVTCQD-MNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
G +++ TC+D +N C YC+Q+ K S C C G+ N C+
Sbjct: 1522 GDGSDEQGCRITSAEYTCEDNVNPCGDDAYCNQI----KTSVFCRCKPGFQRNMKNRQCE 1577
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
+N F S+ Q I + G +Y + +
Sbjct: 1578 DLNECLVFGTCSH------------------QCINIEG-------SYKCVCDQNF----- 1607
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS-N 228
R C G+ VL N T G + + + N RI GMD
Sbjct: 1608 QERNNTCIAKGSEDQVLYIANDTDILGFIYPFNYSGDHQQISHIEHNSRI--TGMDVYYQ 1665
Query: 229 RSTIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDE 287
R II + + P G+ I R A+S L C + ++ + +YW D
Sbjct: 1666 RDMIIWSTQFNPGGIFYKMIHGREKRQANSGLI---CPEFKRPRDIAVDWVAGNIYWTDH 1722
Query: 288 GG-----------NGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKC 334
+ I ++G N + L++ E A+A++ + GM+Y
Sbjct: 1723 SRMHWFSYYTTHWTSLRYSINVGQLNGPNCTRLLTNMAGEPYAIAVNPKRGMMY------ 1776
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDF 394
WT G++ IE MDG+ R ++ + P GL +D + R+Y+AD +L I
Sbjct: 1777 -----WTVIGDHSHIEEAAMDGTLRRILVQKNLQRPTGLAVDHFSERIYWADLELSVIGS 1831
Query: 395 CNYDGT 400
YDG+
Sbjct: 1832 VLYDGS 1837
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 86/230 (37%), Gaps = 54/230 (23%)
Query: 151 VEGLAYDWIGGHIYWLDSRL-----NRIEVCDENGTNR-IVLAKDNITQPRGMMLDPSPG 204
VEGLAY +YW S + ++ +R V+A P + LD
Sbjct: 5 VEGLAYHRAWDTLYWTSSTTSSITRHTVDQTRPGAFDREAVIAMSEDDHPHVLALDEC-- 62
Query: 205 TRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+FWT+W E +P I R + G N ++ST I PNGLT+D ++YF+D L
Sbjct: 63 QNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDHRAEKLYFSDGSLG--- 119
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
KI + DGS ++V L+L +
Sbjct: 120 -------------------------------KIERCEYDGSQRHVIVKSGPGTFLSLAVY 148
Query: 324 NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
+ ++FW+DWG + G + + S + P G+
Sbjct: 149 D-----------NYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGI 187
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ +V + + GL D +Y+ D L +IE C+ +G+ R V+ K G L
Sbjct: 88 AQVVVSTDILTPNGLTIDHRAEKLYFSDGSLGKIERCEYDGSQRHVIVKSG----PGTFL 143
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ ++FW+DWG + G + + S + P G+
Sbjct: 144 SLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGI 187
>gi|338725910|ref|XP_003365220.1| PREDICTED: low-density lipoprotein receptor-related protein 6
isoform 2 [Equus caballus]
Length = 1568
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 115/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++
Sbjct: 139 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFIIINTEIYWPNGLTLDYEERKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 223 SLPHPFALTLFEDTLY-----------WTDW 242
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 394 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 454 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKT 511
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 512 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 537
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 538 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREIII 569
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFIIINTEIYWPNGLTLDYEERKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPLEG--YIYWTD-DEVRAIRRSFIDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 395 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 472 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPNQNLEIQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRSIGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPIALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QAGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSVPNQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSIGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 23/150 (15%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
L++ A NA+I+V G L +A A+D G ++W+D E I+R
Sbjct: 31 LRLVDATNGKENATIVVGG-LEDAAAVDFVFGH---------GLIYWSDVSEEA-IKRTE 79
Query: 354 MDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 80 FNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL-- 137
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 ---------DQPRAIALDPSSGFMYWTDWG 158
>gi|395544578|ref|XP_003774185.1| PREDICTED: low-density lipoprotein receptor-related protein 5
[Sarcophilus harrisii]
Length = 1728
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 123/245 (50%), Gaps = 48/245 (19%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
Q++++SGL +GLA DWIG +YW DS NRIEV + NGT+R VL ++ QPR + L
Sbjct: 214 VQNVIISGLVSPDGLACDWIGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIAL 273
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP+ G +++WTDWGE PRIER GMD S R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 274 DPAHG--YMYWTDWGETPRIERAGMDSSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKL 331
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
FI +AN+DGS +V G L A
Sbjct: 332 SFIH----------------------------------RANLDGSFRQKVVEGSLTHPFA 357
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L L LY WTDW G R I+ +Y P + +
Sbjct: 358 LTLSGDTLY-----------WTDWQTRSIHACNKRTGEKRREILGA-LYSPMDIQVLSQD 405
Query: 380 RRVYF 384
R+ YF
Sbjct: 406 RQPYF 410
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 151/356 (42%), Gaps = 89/356 (25%)
Query: 49 LGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNH 106
LGAL + ++LS D E G CS +C + + Y C+C G LE +
Sbjct: 390 LGALYSPMDIQVLSQDRQPYFHTPCEEDNGGCSHLCLLSPREPFYTCACPTGVQLEDNGK 449
Query: 107 TCKAINHSAAFL----------------------IISNRHSILV-----------ADLEE 133
TCKA L I RH+I + D E
Sbjct: 450 TCKAGAEEVLLLARRTDLRRISLDTPDFTDIILQIDDIRHAIAIDYDPVERYVYWTDDEV 509
Query: 134 KGKDHR------AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
+ AQ +V + ++ +G+A DW+ ++YW D+ +RIEV NGT+R +L
Sbjct: 510 RAIRRAYLDGSGAQTLVSTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILI 569
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+N+ +PR ++L+P G +++WTDWGE+P+IE +DG R +++T + WPNGL LD+
Sbjct: 570 SENLDEPRAIVLNPVMG--YMYWTDWGESPKIECAHLDGQARRVLVNTSLGWPNGLALDL 627
Query: 248 ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307
++Y+ D+K D KI N+DG+
Sbjct: 628 QEGKLYWGDAKTD----------------------------------KIEVINVDGTRRR 653
Query: 308 ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L+ +L L +Y WTDW + IER+ ++R II
Sbjct: 654 TLLEDKLPHIFGFTLLGDYIY-----------WTDW-QRRSIERVHKVKADRDVII 697
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 102/189 (53%), Gaps = 21/189 (11%)
Query: 237 IYWPNGLTLDIATRRVYF--ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
IYW + + A ++ YF + S + + L + I +KLYW D N
Sbjct: 192 IYWTD--VSEEAIKQTYFNQSGSAVQNVIISGLVSPDGLACDWIGKKLYWTDSETN---- 245
Query: 295 KIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+I AN++G++ +L L + A+ALD +G +Y WTDWGE PRIER
Sbjct: 246 RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY-----------WTDWGETPRIERA 294
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
GMD S R I+ + IYWPNGLT+D+ +++Y+AD+KL FI N DG+ RQ+V+ L
Sbjct: 295 GMDSSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEGSLTH 354
Query: 413 EFTNDLMGD 421
F L GD
Sbjct: 355 PFALTLSGD 363
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 109/237 (45%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C T + C C G L D TC AFL+ ++R +I
Sbjct: 718 NPCGEKNGGCSHLCFFTPHATKCGCPIGLELLSDLQTCII---PEAFLVFTSRAAIHRIS 774
Query: 131 LEEKGKD----------------------------------------HRAQDIVVSGLDL 150
LE D + ++ GLD
Sbjct: 775 LETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAYMNGSSVEHVIQFGLDY 834
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR + LDP+ G +L+W
Sbjct: 835 PEGMAVDWMGRNLYWADTGTNRIEVARLDGQYRQVLVWKDLDNPRSLALDPTKG--YLYW 892
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG PRI R MDG+N T++ K+ N LT+D A +R+Y+ D + I+ ++
Sbjct: 893 TEWGGKPRIVRAYMDGTNSITLVD-KVGRANDLTIDYADQRLYWTDLDTNMIESSNM 948
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L +++ S+E I+
Sbjct: 770 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAYMNGSSVEHVIQ 829
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + R LYW D G N +I A +DG +LV L +LALD
Sbjct: 830 FGLDYPEGMAVDWMGRNLYWADTGTN----RIEVARLDGQYRQVLVWKDLDNPRSLALDP 885
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G LY WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 886 TKGYLY-----------WTEWGGKPRIVRAYMDGTNSITLVD-KVGRANDLTIDYADQRL 933
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ N G++++I+ D
Sbjct: 934 YWTDLDTNMIESSNM--LGQERIIIAD 958
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 141/355 (39%), Gaps = 63/355 (17%)
Query: 59 EILSNDSVTCQDMNECEQP-GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C Q G+C Q+C Y C+C Y L+ ++ C + F
Sbjct: 1006 DILVFHSSRQDGLNDCVQNNGHCGQLCLAVPNGYRCACATHYSLDPNHRNCSS---PTTF 1062
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D ++ D+V+ GL V + YD + IYW+D R N
Sbjct: 1063 LLFSQKCAISRMIPD------DQQSPDVVLPLHGLRNVRAIDYDPLDKFIYWVDGRQNIK 1116
Query: 174 EVCDENGTNRIV--LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRST 231
D+ IV ++ QP + +D T L+WT N + + G
Sbjct: 1117 RARDDGSQPFIVTSASQGQEKQPHDLSIDVYSHT--LYWTCEATN-TVNVHRLSGEAIGV 1173
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
++ P + ++ +YF + + D
Sbjct: 1174 VLRGDRDRPRAIAVNAERGYMYFTNMQ---------------------------DRAA-- 1204
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
KI +A +DG+ +L + L +AL ++N + LFW D + RIE
Sbjct: 1205 ---KIERAALDGTEREVLFTTGLIRPVALVVDNHLGK---------LFWVD-ADLKRIES 1251
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ G+NR T+ + I P GLT + +Y+ D + I+ G ++ I
Sbjct: 1252 CDLSGANRVTLEDSNIVQPVGLT--VLGDHLYWIDRQQQMIERVEKTGGYKRTRI 1304
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 152/375 (40%), Gaps = 98/375 (26%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 291 IERAGMDSSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 350
Query: 190 NITQPRGMMLDPSPGTRWLFWTDW------------GENPR-----------IERIGMD- 225
++T P + L L+WTDW GE R I+ + D
Sbjct: 351 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGEKRREILGALYSPMDIQVLSQDR 406
Query: 226 -------------GSNRSTIISTKIYW-----PNGLTLD--------------IATRRVY 253
G + ++S + + P G+ L+ + RR
Sbjct: 407 QPYFHTPCEEDNGGCSHLCLLSPREPFYTCACPTGVQLEDNGKTCKAGAEEVLLLARRTD 466
Query: 254 FADSKLDFIDCKSLEIKTN-------VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
LD D + ++ + ++Y + R +YW D+ I +A +DGS A
Sbjct: 467 LRRISLDTPDFTDIILQIDDIRHAIAIDYDPVERYVYWTDDEVRA----IRRAYLDGSGA 522
Query: 307 SILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
LVS ++ + +A+D R L+WTD G + RIE ++G++R +IS
Sbjct: 523 QTLVSTEINDPDGIAVDW-----------VARNLYWTDTGTD-RIEVTRLNGTSRKILIS 570
Query: 365 TKIYWPNGLTLDIATRRVYFAD-SKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNG 423
+ P + L+ +Y+ D + I+ + DG R+ +L++ + + N
Sbjct: 571 ENLDEPRAIVLNPVMGYMYWTDWGESPKIECAHLDGQARR--VLVNTSLGWPN------- 621
Query: 424 VPALALDLENGMLYY 438
LALDL+ G LY+
Sbjct: 622 --GLALDLQEGKLYW 634
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N ++ +N A +E D ++++ +GL L
Sbjct: 1172 GVVLRGDRDRPRAIAVNAERGYMYFTNMQD-RAAKIERAALDGTEREVLFTTGLIRPVAL 1230
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + L+W D
Sbjct: 1231 VVDNHLGKLFWVDADLKRIESCDLSGANRVTLEDSNIVQPVGLTV----LGDHLYWID-R 1285
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ G + T I +I G+
Sbjct: 1286 QQQMIERVEKTGGYKRTRIQGRISHLTGI 1314
>gi|387016736|gb|AFJ50487.1| Low-density lipoprotein receptor-related protein 5 precursor
[Crotalus adamanteus]
Length = 1624
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 125/245 (51%), Gaps = 48/245 (19%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
Q ++VSGL +GLA DWIG +YW DS NRIEV + NGT+R VL ++ QPR + +
Sbjct: 101 VQSVIVSGLLSPDGLACDWIGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIAV 160
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP+ G +++WTDWGE PRIER GMD S R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 161 DPAHG--YMYWTDWGETPRIERAGMDSSFRKIIVDSDIYWPNGLTIDLNEQKLYWADAKL 218
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
FI +AN+DGS +V G L A
Sbjct: 219 SFIH----------------------------------RANLDGSFRQKVVEGSLTHPFA 244
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L L LY WTDW G N+ II++ +Y P + +
Sbjct: 245 LTLAGDTLY-----------WTDWQTRSIHACNKKAGENKREIINS-LYSPMDIQVLSPE 292
Query: 380 RRVYF 384
R+ YF
Sbjct: 293 RQPYF 297
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 156/343 (45%), Gaps = 71/343 (20%)
Query: 33 CKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C+ G CS+ C +P CTCP G L D TC+ E+ ++ + S
Sbjct: 301 CEESNGGCSHLCLLSPKEPFYSCTCPTGVQLQEDGKTCK--AGAEEVLLLARRTDLRRIS 358
Query: 91 YICSCNEGYVLEYDNHTCKAINHSAA----------FLIISNRHSILVADLEEKGKDHRA 140
+L+ DN I H+ A + + +I A L+ G A
Sbjct: 359 LDMPDFTDVILQIDN-----IRHAIAIDYDPVEGYIYWTDDDVRAIRRAFLDGSG----A 409
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q +V + ++ +G+A DW+G ++YW D+ +RIEV NGT+R +L +N+ +PR ++L+
Sbjct: 410 QTLVTTEINHPDGIAVDWVGRNLYWTDTGTDRIEVTRLNGTSRKILISENLDEPRAIVLN 469
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWGENP+IE +DGS R +++T + WPNGL LD+ ++Y+ D+K D
Sbjct: 470 PVMG--YMYWTDWGENPKIESAYLDGSERKVLVNTSLGWPNGLALDLEENKLYWGDAKTD 527
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
I+ SL DG+ L+ +L
Sbjct: 528 KIEVISL----------------------------------DGTMRKTLIEDKLPHIFGF 553
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +++WTDW + IER+ ++R II
Sbjct: 554 TL-----------LGEYIYWTDW-QRRSIERVHKKWASRDIII 584
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 149/349 (42%), Gaps = 95/349 (27%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE 132
E G CS +C + + Y C+C G L+ D TCKA + L+++ R
Sbjct: 303 ESNGGCSHLCLLSPKEPFYSCTCPTGVQLQEDGKTCKA--GAEEVLLLARR--------- 351
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
+ L RI + D ++L DNI
Sbjct: 352 -----------------------------------TDLRRISL-DMPDFTDVILQIDNIR 375
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
+ DP G +++WTD + I R +DGS T+++T+I P+G+ +D
Sbjct: 376 HAIAIDYDPVEG--YIYWTD-DDVRAIRRAFLDGSGAQTLVTTEINHPDGIAVDW----- 427
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+ R LYW D G + +I ++G++ IL+S
Sbjct: 428 -------------------------VGRNLYWTDTGTD----RIEVTRLNGTSRKILISE 458
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
L E A+ L M Y ++WTDWGENP+IE +DGS R +++T + WPNG
Sbjct: 459 NLDEPRAIVLNPVMGY---------MYWTDWGENPKIESAYLDGSERKVLVNTSLGWPNG 509
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
L LD+ ++Y+ D+K D I+ + DGT R+ +I L F L+G+
Sbjct: 510 LALDLEENKLYWGDAKTDKIEVISLDGTMRKTLIEDKLPHIFGFTLLGE 558
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 86/146 (58%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
I +KLYW D N +I AN++G++ +L L + A+A+D +G +Y
Sbjct: 120 IGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIAVDPAHGYMY------- 168
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMD S R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 169 ----WTDWGETPRIERAGMDSSFRKIIVDSDIYWPNGLTIDLNEQKLYWADAKLSFIHRA 224
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 225 NLDGSFRQKVVEGSLTHPFALTLAGD 250
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 118/249 (47%), Gaps = 34/249 (13%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPG----YCSQMCT-- 85
C G CS+ C TP C CP G E+LS DM C P + S+
Sbjct: 607 CAENNGGCSHLCFFTPQECRCACPIGLELLS-------DMRTCIIPEAFLVFTSRAAVHR 659
Query: 86 -------NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH 138
N + E L++D ++ + + + +I A + G +H
Sbjct: 660 ISLGASNNDVAIPLTGVKEASALDFD------VSDNRIYWTDISLKTISRAFMNGSGLEH 713
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
++ GLD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR +
Sbjct: 714 ----VIEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGLFRQVLVWKDLDNPRSLA 769
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
LDPS G +++WT+WG P+I R MDG+N S ++ K+ N LT+D +R+Y+ D
Sbjct: 770 LDPSKG--YMYWTEWGGKPKIVRAYMDGTN-SIMLVDKVGRANDLTIDYKDQRLYWTDLD 826
Query: 259 LDFIDCKSL 267
I+ ++
Sbjct: 827 TSMIESSNM 835
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 97/212 (45%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
+ RI + SN I T + + L D++ R+Y+ D L F++ LE I+
Sbjct: 657 VHRISLGASNNDVAIPLTGVKEASALDFDVSDNRIYWTDISLKTISRAFMNGSGLEHVIE 716
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 717 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGLFRQVLVWKDLDNPRSLALDP 772
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I R MDG+N S ++ K+ N LT+D +R+
Sbjct: 773 SKGYMY-----------WTEWGGKPKIVRAYMDGTN-SIMLVDKVGRANDLTIDYKDQRL 820
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D I+ N G R ++I DL F
Sbjct: 821 YWTDLDTSMIESSNMLGQER-EIIADDLPHPF 851
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 136/346 (39%), Gaps = 67/346 (19%)
Query: 59 EILSNDSVTCQDMNECEQP-GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S NEC Q G+C Q+C Y C C Y L+ C + +
Sbjct: 893 DILVFHSSRQDGFNECAQNNGHCGQLCLAIPNGYRCGCASHYTLDPKTRNCSSPSSFLL- 951
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRI 173
S R +I ++ D D + DI+ + GL V+ + YD + IYW+D R N I
Sbjct: 952 --FSQRSAISRMIPD------DQHSPDIILPIHGLRNVKAIDYDPLDAFIYWIDGRQNII 1003
Query: 174 EVCDENGTNRIVL------AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227
+ ++G+ + +++ QP + +D T L+WT N I ++G
Sbjct: 1004 KRAKDDGSQPFTVMNIRNQSQNPEKQPHDLSIDIFSHT--LYWTCEATN-TINVHRLNGE 1060
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDE 287
++ P + ++ +YF TN+
Sbjct: 1061 QIGVVLRGDHDKPRAIVVNAERGYMYF----------------TNMQERAP--------- 1095
Query: 288 GGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
KI +A +DG+ +L + L +AL ++N + LFW D +
Sbjct: 1096 -------KIERAALDGTEREVLFTTGLLRPVALVIDNKLGK---------LFWVD-ADLK 1138
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
RIE + G+NR T+ + I P GLT + +Y+ D + I+
Sbjct: 1139 RIESCDLSGANRVTLQDSNILQPMGLT--VLGNHLYWIDRQQQMIE 1182
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 131/320 (40%), Gaps = 51/320 (15%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V + L GLA D +YW D++ ++IEV +GT R L +D + G L
Sbjct: 499 LVNTSLGWPNGLALDLEENKLYWGDAKTDKIEVISLDGTMRKTLIEDKLPHIFGFTL--- 555
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN--GLTLDIATRR--------- 251
+++WTDW + IER+ ++R II P+ GL TR
Sbjct: 556 -LGEYIYWTDW-QRRSIERVHKKWASRDIIIDQ---LPDLMGLKATSVTRAEGTNPCAEN 610
Query: 252 -------VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+F + LE+ +++ I + +G +N D
Sbjct: 611 NGGCSHLCFFTPQECRCACPIGLELLSDMRTCIIPEAFLVFTSRAAVHRISLGASNND-- 668
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+I ++G + EA ALD + ++WTD I R M+GS +I
Sbjct: 669 -VAIPLTG-VKEASALDFDVS---------DNRIYWTDISLK-TISRAFMNGSGLEHVIE 716
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGV 424
+ +P G+ +D + +Y+AD+ + I+ DG RQ ++ DL +
Sbjct: 717 FGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGLFRQVLVWKDL-----------DNP 765
Query: 425 PALALDLENGMLYYSTEGAE 444
+LALD G +Y++ G +
Sbjct: 766 RSLALDPSKGYMYWTEWGGK 785
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 120/294 (40%), Gaps = 33/294 (11%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 178 IERAGMDSSFRKIIVDSDIYWPNGLTIDLNEQKLYWADAKLSFIHRANLDGSFRQKVVEG 237
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G N+ II++ +Y P + +
Sbjct: 238 SLTHPFALTL----AGDTLYWTDWQTRSIHACNKKAGENKREIINS-LYSPMDIQVLSPE 292
Query: 250 RRVYFA----------------DSKLDFIDCK-SLEIKTNVNYSTIFRKLYWIDEGGNGV 292
R+ YF K F C ++ + T +
Sbjct: 293 RQPYFHTPCEESNGGCSHLCLLSPKEPFYSCTCPTGVQLQEDGKTCKAGAEEVLLLARRT 352
Query: 293 PLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
L+ +M IL + A+A+D + +++WTD + I R
Sbjct: 353 DLRRISLDMPDFTDVILQIDNIRHAIAIDYD---------PVEGYIYWTD-DDVRAIRRA 402
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ +I
Sbjct: 403 FLDGSGAQTLVTTEINHPDGIAVDWVGRNLYWTDTGTDRIEVTRLNGTSRKILI 456
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D+ +AI N ++ +N +E D ++++ +GL L
Sbjct: 1063 GVVLRGDHDKPRAIVVNAERGYMYFTNMQE-RAPKIERAALDGTEREVLFTTGLLRPVAL 1121
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + L+W D
Sbjct: 1122 VIDNKLGKLFWVDADLKRIESCDLSGANRVTLQDSNILQPMGLTV----LGNHLYWID-R 1176
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ + T I +I G+
Sbjct: 1177 QQQMIERVEKTNGYKRTRIQGRIAHLTGI 1205
>gi|148694899|gb|EDL26846.1| low density lipoprotein-related protein 1B (deleted in tumors) [Mus
musculus]
Length = 2538
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 141/294 (47%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +CD + DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 841 RCIPSDGLCDIRDDCGDGSDE-TNCHINECLSKKISGCSQDCQDLPVSYKCKCWPGFQLK 899
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C EGY + DN + C++++ FLI++
Sbjct: 900 DDGKTCVDIDECSSGFPCSQQCINTYGTYKCRCTEGYETQPDNPNGCRSLSDEEPFLILA 959
Query: 122 NRHSI----------------------LVADLEE---------KGKDHRAQDIVVSGLDL 150
++H I L D E + R + ++G D+
Sbjct: 960 DQHEIRKISTDGSNYTLLKQGLNNVIALDFDYREEFIYWIDSSRPNGSRINRMCLNGSDI 1019
Query: 151 V--------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
LA DWIG ++YW D+ IEV NG VL + PR + LDP
Sbjct: 1020 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTVLVSKRLKFPRDLSLDPR 1079
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G L+W D E P I R+GMDG+N+S +I TKI P LT+D R+Y+AD
Sbjct: 1080 AGN--LYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLYWAD 1131
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 132/330 (40%), Gaps = 80/330 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNT---------CHPTPLGALCTC 55
C+ + CDG DC +G+DE GC +H C N C+ C C
Sbjct: 1713 CIPMELQCDGLDDCGDGSDE-QGCLKTPIEH---TCENNGNPCGDDAYCNQIKTSVFCRC 1768
Query: 56 PPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA 115
PG + C D+NEC G CS C NT+GSY C C++ + + N++C A
Sbjct: 1769 KPGFQRNMKGRECADLNECLLFGICSHHCLNTRGSYKCVCDQNF--QEKNNSCIAKGSED 1826
Query: 116 AFLIISNRHSIL--------------VADLEEKGK------------------------- 136
L I+N IL ++ +E +
Sbjct: 1827 QALYIANDTDILGFIYPFNYSGGHQQISHVEHNSRITGMDVHYQRNVIVWSTQFNPGGIF 1886
Query: 137 ----DHRAQDIVVSGLDLVE-----GLAYDWIGGHIYWLD-SRLN--------------R 172
D R + SGL E +A DW+ G++YW D SR++
Sbjct: 1887 YKMIDAREKRQANSGLICPEFKRPRDIAVDWVAGNVYWTDHSRMHWFSYYTTHWTSLRYS 1946
Query: 173 IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI 232
I V NG N L + +P + ++P G ++WT G++ IE MDG+ R +
Sbjct: 1947 INVGQLNGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVIGDHSHIEEAAMDGTLRRVL 2004
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ + P GLT+D R+Y+AD +L I
Sbjct: 2005 VQKNLQRPTGLTVDHFGERIYWADFELSII 2034
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G N ++ST I PNGLT+D ++YF+D L
Sbjct: 266 ECQNLMFWTNWNEQHPSIMRATLTGKNAHVVVSTDILTPNGLTIDHRAEKLYFSDGSLGK 325
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 326 IERCEYDGSQRHVIV 340
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 89/240 (37%), Gaps = 54/240 (22%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI--EVCDENGTNRI----VLAKDNITQP 194
+ ++V + VEGLAY +YW S + I D+ I V+ P
Sbjct: 200 RQVIVENVGSVEGLAYHRAWDTLYWTSSSTSSITRHTVDQTRPGAIDREAVITMSEDDHP 259
Query: 195 RGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
+ LD +FWT+W E +P I R + G N ++ST I PNGLT+D ++Y
Sbjct: 260 HVLALDEC--QNLMFWTNWNEQHPSIMRATLTGKNAHVVVSTDILTPNGLTIDHRAEKLY 317
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
F+D L KI + DGS ++V
Sbjct: 318 FSDGSLG----------------------------------KIERCEYDGSQRHVIVKSG 343
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
L+L + + ++FW+DWG + G + S + P G+
Sbjct: 344 PGTFLSLAVYD-----------NYIFWSDWGRRAILRSNKYTGGETKILRSDIPHQPMGI 392
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 8/119 (6%)
Query: 125 SILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
SI+ A L K A +V + + GL D +Y+ D L +IE C+ +G+ R
Sbjct: 282 SIMRATLTGK----NAHVVVSTDILTPNGLTIDHRAEKLYFSDGSLGKIERCEYDGSQRH 337
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
V+ K G L + ++FW+DWG + G + S + P G+
Sbjct: 338 VIVKSG----PGTFLSLAVYDNYIFWSDWGRRAILRSNKYTGGETKILRSDIPHQPMGI 392
>gi|194218564|ref|XP_001917008.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 5 [Equus caballus]
Length = 1623
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 111/204 (54%), Gaps = 47/204 (23%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + L
Sbjct: 107 VQNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIAL 166
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 167 DPAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKL 224
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
FI +AN+DGS +V G L A
Sbjct: 225 SFIH----------------------------------RANLDGSFRQKVVEGSLTHPFA 250
Query: 320 LDLENGMLYYSTLKCTRWLFWTDW 343
L L LY WTDW
Sbjct: 251 LTLSGDTLY-----------WTDW 263
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 149/344 (43%), Gaps = 71/344 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKG 89
C+ G CS+ C +P C CP G L ++ TC+ E+ ++ +
Sbjct: 306 RCEEDNGGCSHLCLLSPREPFYTCACPTGVQLQDNGKTCK--AGAEEVLLLARRTDLRRI 363
Query: 90 SYICSCNEGYVLEYDNHTCKAINHSAA----------FLIISNRHSILVADLEEKGKDHR 139
S VL+ D+ I H+ A + +I A LE GK
Sbjct: 364 SLDTPDFTDIVLQVDD-----IRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLEGSGK--- 415
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
Q +V + ++ +G+A DW+ + W D+ +RIEV NGT+R +L +++ +PR ++L
Sbjct: 416 -QTLVNTEINDPDGIAVDWVARTLTWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIVL 474
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P+ G ++WTDWGENP+IE +DG R +++T + WPNGL LD+ R+Y+ D+K
Sbjct: 475 HPAMGL--MYWTDWGENPKIECANLDGQERRVLVNTSLGWPNGLALDLQEGRLYWGDAKT 532
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N+DG+ L+ +L
Sbjct: 533 D----------------------------------KIEVINVDGTKRRTLLEDKLPHIFG 558
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ ++R II
Sbjct: 559 FTLLGDFIY-----------WTDW-QRRSIERVHKVKASRDVII 590
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 126 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 174
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 175 ----WTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 230
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 231 NLDGSFRQKVVEGSLTHPFALTLSGD 256
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 149/349 (42%), Gaps = 95/349 (27%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE 132
E G CS +C + + Y C+C G L+ + TCKA + L+++ R
Sbjct: 309 EDNGGCSHLCLLSPREPFYTCACPTGVQLQDNGKTCKA--GAEEVLLLARR--------- 357
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
+ L RI + + T+ IVL D+I
Sbjct: 358 -----------------------------------TDLRRISLDTPDFTD-IVLQVDDIR 381
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
+ DP G +++WTD E I R ++GS + T+++T+I P+G+ +D
Sbjct: 382 HAIAIDYDPLEG--YVYWTD-DEVRAIRRAYLEGSGKQTLVNTEINDPDGIAVDW----- 433
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+ R L W D G + +I ++G++ ILVS
Sbjct: 434 -------------------------VARTLTWTDTGTD----RIEVTRLNGTSRKILVSE 464
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
L E A+ L M ++WTDWGENP+IE +DG R +++T + WPNG
Sbjct: 465 DLDEPRAIVLHPAMGL---------MYWTDWGENPKIECANLDGQERRVLVNTSLGWPNG 515
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
L LD+ R+Y+ D+K D I+ N DGT R+ ++ L F L+GD
Sbjct: 516 LALDLQEGRLYWGDAKTDKIEVINVDGTKRRTLLEDKLPHIFGFTLLGD 564
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 105/230 (45%), Gaps = 46/230 (20%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C T + C C G L D TC AFL+ ++R +I LE D
Sbjct: 618 GGCSHLCFFTPHATKCGCPIGLELLSDMKTCIV---PEAFLVFTSRAAIHRISLETNNND 674
Query: 138 ----------------------------------------HRAQDIVVSGLDLVEGLAYD 157
+ ++ GLD EG+A D
Sbjct: 675 VAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIEFGLDYPEGMAVD 734
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP 217
W+G ++YW D+ NRIEV +G R VL ++ PR + LDP+ G +++WT+WG P
Sbjct: 735 WMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTKG--YIYWTEWGGKP 792
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
RI R MDG+N T++ K+ N LT+D A +R+Y+ D + I+ ++
Sbjct: 793 RIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTNMIESSNM 841
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 139/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + CSC Y L+ + C F
Sbjct: 899 DILVFHSSRQDGLNDCMHNNGQCGQLCLAIPGGHRCSCASHYTLDPSSRNCSP---PTTF 955
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+++ GL V+ + YD + IYW+D R N I
Sbjct: 956 LLFSQKCAISRMIPD------DQHSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQN-I 1008
Query: 174 EVCDENGTNRIVLAKDNITQ-----PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT VL +Q P + +D +R LFWT N I ++G
Sbjct: 1009 KRAKDDGTQPFVLTSPGQSQSPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLNGEA 1065
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1066 MGVVLRGDRDKPRAIVVNAERGYLYFTNMQ---------------------------DRA 1098
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A +DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1099 A-----KIERAALDGTEREVLFTTGLIRPVALVVDNALGK---------LFWVD-ADLKR 1143
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT + + +Y+ D + I+
Sbjct: 1144 IESCDLSGANRLTLEDANIVQPMGLT--VLGKHLYWIDRQQQMIE 1186
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E I+
Sbjct: 663 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIE 722
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 723 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 778
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 779 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 826
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ N G+++V++ D
Sbjct: 827 YWTDLDTNMIESSNM--LGQERVVIAD 851
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 139/328 (42%), Gaps = 53/328 (16%)
Query: 135 GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
G++ R +V + L GLA D G +YW D++ ++IEV + +GT R L +D +
Sbjct: 499 GQERRV--LVNTSLGWPNGLALDLQEGRLYWGDAKTDKIEVINVDGTKRRTLLEDKLPHI 556
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVY 253
G L +++WTDW + IER+ ++R II P+ + L + +V
Sbjct: 557 FGFTL----LGDFIYWTDW-QRRSIERVHKVKASRDVIIDQ---LPDLMGLKAVNVAKVV 608
Query: 254 FAD---------SKLDFIDCKS--------LEIKTNVNYSTIFRKLYWIDEGGNGVPLKI 296
+ S L F + LE+ +++ + I + + + + +I
Sbjct: 609 GTNPCADGNGGCSHLCFFTPHATKCGCPIGLELLSDMK-TCIVPEAFLVFTSRAAI-HRI 666
Query: 297 GKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG 356
+ A L + AL D+ N +Y WTD I R M+G
Sbjct: 667 SLETNNNDVAIPLTGVKEASALDFDVSNNHIY-----------WTDVSLK-TISRAFMNG 714
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
S+ +I + +P G+ +D + +Y+AD+ + I+ DG RQ ++ DL
Sbjct: 715 SSVEHVIEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDL------ 768
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAE 444
+ +LALD G +Y++ G +
Sbjct: 769 -----DNPRSLALDPTKGYIYWTEWGGK 791
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N +L +N A +E D ++++ +GL L
Sbjct: 1067 GVVLRGDRDKPRAIVVNAERGYLYFTNMQD-RAAKIERAALDGTEREVLFTTGLIRPVAL 1125
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + + L+W D
Sbjct: 1126 VVDNALGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPMGLTV----LGKHLYWID-R 1180
Query: 215 ENPRIERIGMDGSNRSTIISTKI 237
+ IER+ ++ T + ++
Sbjct: 1181 QQQMIERVEKTTGDKRTRVQGRV 1203
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 30/169 (17%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDLENGMLYYS 330
++Y + +YW D+ I +A ++GS LV+ ++ + +A+D
Sbjct: 386 IDYDPLEGYVYWTDDEVRA----IRRAYLEGSGKQTLVNTEINDPDGIAVDW-------- 433
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD-SKL 389
R L WTD G + RIE ++G++R ++S + P + L A +Y+ D +
Sbjct: 434 ---VARTLTWTDTGTD-RIEVTRLNGTSRKILVSEDLDEPRAIVLHPAMGLMYWTDWGEN 489
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYY 438
I+ N DG R+ +L++ + + N LALDL+ G LY+
Sbjct: 490 PKIECANLDGQERR--VLVNTSLGWPN---------GLALDLQEGRLYW 527
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 306 ASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTI 362
++I+VSG L +A A+D + G +Y WTD E + + G+ +
Sbjct: 63 STIVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAVQNV 110
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 111 VISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------D 159
Query: 423 GVPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 160 QPRAIALDPAHGYMYWTDWG 179
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 184 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 243
Query: 190 NITQPRGMMLDPSPGTRWLFWTDW 213
++T P + L L+WTDW
Sbjct: 244 SLTHPFALTLSGDT----LYWTDW 263
>gi|440910737|gb|ELR60499.1| Low-density lipoprotein receptor-related protein 6, partial [Bos
grunniens mutus]
Length = 1601
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 115/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 67 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 126
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++
Sbjct: 127 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSDRFVIINTEIYWPNGLTLDYEERKL 184
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI ++N+DG+N +V G
Sbjct: 185 YWADAKLNFIH----------------------------------RSNLDGTNRQAVVKG 210
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 211 SLPHPFALTLFEDTLY-----------WTDW 230
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 141/329 (42%), Gaps = 93/329 (28%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI--------- 126
G CS +C + K Y C+C G L + TCK + + L+++ R +
Sbjct: 279 GGCSHLCLMSPVKPFYQCACPTGVTLLENGKTCK--DGATELLLLARRTDLRRISLDTPD 336
Query: 127 ---LVADLEE------------------KGKDHRA-----------QDIVVSGLDLVEGL 154
+V LE+ + RA Q +V + + +G+
Sbjct: 337 FTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGI 396
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++LDP G +++WTDWG
Sbjct: 397 AVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVG--YMYWTDWG 454
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
E P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K D
Sbjct: 455 EIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTD-------------- 500
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
KI N DG+ +LV ++ L +Y
Sbjct: 501 --------------------KIEVMNTDGTGRRVLVEDKIPHIFGFTLLGDYVY------ 534
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ + R II
Sbjct: 535 -----WTDW-QRRSIERVHKRSAEREVII 557
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 96 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 141
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++Y+AD+KL+FI N D
Sbjct: 142 -WTDWGEVPKIERAGMDGSDRFVIINTEIYWPNGLTLDYEERKLYWADAKLNFIHRSNLD 200
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 201 GTNRQAVVKGSLPHPFALTLFED 223
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 111/237 (46%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 578 NPCAEDNGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 634
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 635 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 694
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 695 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 752
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 753 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 808
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 630 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 689
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 690 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 745
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 746 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 793
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 794 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 824
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 879 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 935
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 936 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 991
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 992 VSSVPNQNLEIQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRSIGVVLKGEQDRPR 1048
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1049 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1076
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1077 DGTEREVLFFSGLSKPVALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1126
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ T I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1127 LEDTNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1179
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 761 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 819
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 820 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 874
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 875 QAGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 934
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 935 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 991
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 992 VSSVPNQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSIGVV------------ 1039
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1040 LKGEQDRPRAIVVNPEKGYMYFT 1062
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 27/152 (17%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIER 351
L++ A NA+I+V G L +A ALD +G++Y W+D E I+R
Sbjct: 19 LRLVDAANGKENATIVVGG-LEDAAALDFVFSHGLIY-----------WSDVSEEA-IKR 65
Query: 352 IGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
I + + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 66 IEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL 125
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 126 -----------DQPRAIALDPSSGFMYWTDWG 146
>gi|359065814|ref|XP_002687829.2| PREDICTED: low-density lipoprotein receptor-related protein 6
isoform 1 [Bos taurus]
Length = 1613
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 115/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++
Sbjct: 139 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSDRFVIINTEIYWPNGLTLDYEERKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI ++N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------RSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 223 SLPHPFALTLFEDTLY-----------WTDW 242
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 141/329 (42%), Gaps = 93/329 (28%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI--------- 126
G CS +C + K Y C+C G L + TCK + + L+++ R +
Sbjct: 291 GGCSHLCLMSPVKPFYQCACPTGVTLLENGKTCK--DGATELLLLARRTDLRRISLDTPD 348
Query: 127 ---LVADLEE------------------KGKDHRA-----------QDIVVSGLDLVEGL 154
+V LE+ + RA Q +V + + +G+
Sbjct: 349 FTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGI 408
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++LDP G +++WTDWG
Sbjct: 409 AVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVG--YMYWTDWG 466
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
E P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K D
Sbjct: 467 EIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTD-------------- 512
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
KI N DG+ +LV ++ L +Y
Sbjct: 513 --------------------KIEVMNTDGTGRRVLVEDKIPHIFGFTLLGDYVY------ 546
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ + R II
Sbjct: 547 -----WTDW-QRRSIERVHKRSAEREVII 569
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSDRFVIINTEIYWPNGLTLDYEERKLYWADAKLNFIHRSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 111/237 (46%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEDNGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPNQNLEIQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRSIGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPVALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ T I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDTNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QAGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSVPNQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSIGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 27/152 (17%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIER 351
L++ A NA+I+V G L +A ALD +G++Y W+D E I+R
Sbjct: 31 LRLVDAANGKENATIVVGG-LEDAAALDFVFSHGLIY-----------WSDVSEEA-IKR 77
Query: 352 IGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
I + + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 78 IEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL 137
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 -----------DQPRAIALDPSSGFMYWTDWG 158
>gi|194379030|dbj|BAG58066.1| unnamed protein product [Homo sapiens]
Length = 1225
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 132/514 (25%), Positives = 221/514 (42%), Gaps = 117/514 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
RC+++ KVCDG DCP DE G C + C C CH TP G C CPPG
Sbjct: 278 RCISIYKVCDGILDCPGREDENNTSTGKYCSMTLCSALN--CQYQCHETPYGGACFCPPG 335
Query: 59 EILS-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH-SAA 116
I++ NDS TC + ++C+ G C Q C + G ++C C EGY+L + CKA + A
Sbjct: 336 YIINRNDSRTCVEFDDCQIWGICDQKCESRPGRHLCHCEEGYILGRGQY-CKANDSFGEA 394
Query: 117 FLIISNRHSILVADLEEKGKDHR------------------------------------- 139
+I SN +L+ D+ G+ R
Sbjct: 395 SIIFSNGRDLLIGDIH--GRSFRILVESQNRGVAVGVAFHYHLQRVFWTDTVQNKVFSVD 452
Query: 140 -----AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
Q+++ ++ E LA DW+ IY +++++NRI++ + +G+ R+ L +N+ P
Sbjct: 453 INGLNIQEVLNVSVETPENLAVDWVNNKIYLVETKVNRIDMVNLDGSYRVTLITENLGHP 512
Query: 195 RGMMLDPSPGTR-------------------WLFWTDWGENPRIERIGMDGSNRSTIIST 235
RG+ +DP+ G +F+TDW ++ + +N+ T +
Sbjct: 513 RGIAVDPTVGKTVVHGGSLIPHPFGVSLFEGQVFFTDW------TKMAVLKANKFTETNP 566
Query: 236 KIYW-----PNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN 290
++Y+ P G+T+ + R+ Y + D + E +++ T L + +
Sbjct: 567 QVYYQASLRPYGVTVYHSLRQPYATNPCKD--NNGGCEQVCVLSHRTDNDGLGFRCKCTF 624
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLY-----YSTLKCTR--------- 336
G L + + G + E+LA D + LY Y ++ R
Sbjct: 625 GFQLDTDERHCIGREILAANRVENVESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTV 684
Query: 337 -----------------WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+LF+TDW +I R DGS+ +I+T + WPNGL +D A
Sbjct: 685 VQYLNNPRSVVVHPFAGYLFFTDWFRPAKIMRAWSDGSHLLPVINTTLGWPNGLAIDWAA 744
Query: 380 RRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
R+Y+ D+ D I+ +DG R+++ I+ M
Sbjct: 745 SRLYWVDAYFDKIEHSTFDGLDRRRLGHIEQMTH 778
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 112/261 (42%), Gaps = 48/261 (18%)
Query: 68 CQDMNE-CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
C+D N CEQ S N + C C G+ L+ D C I
Sbjct: 594 CKDNNGGCEQVCVLSHRTDNDGLGFRCKCTFGFQLDTDERHCIG-------------REI 640
Query: 127 LVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIV 185
L A+ E VE LA+DWI ++YW DS I V + T R V
Sbjct: 641 LAANRVEN----------------VESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTV 684
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
+ + PR +++ P G +LF+TDW +I R DGS+ +I+T + WPNGL +
Sbjct: 685 VQY--LNNPRSVVVHPFAG--YLFFTDWFRPAKIMRAWSDGSHLLPVINTTLGWPNGLAI 740
Query: 246 DIATRRVYFADSKLDFIDCKS-----------LEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
D A R+Y+ D+ D I+ + +E T+ IF + + + G +
Sbjct: 741 DWAASRLYWVDAYFDKIEHSTFDGLDRRRLGHIEQMTHPFGLAIFGEHLFFTDWRLGAII 800
Query: 295 KIGKANMDGSNASILVSGQLY 315
++ KA DG +++ SG Y
Sbjct: 801 RVRKA--DGGEMTVIRSGIAY 819
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 18/24 (75%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC 28
CVNL+ VCDG DCPNG DE P C
Sbjct: 1188 CVNLSVVCDGIFDCPNGTDESPLC 1211
>gi|426225502|ref|XP_004006904.1| PREDICTED: low-density lipoprotein receptor-related protein 6
isoform 1 [Ovis aries]
Length = 1613
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 115/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++
Sbjct: 139 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSDRFVIINTEIYWPNGLTLDYEERKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI ++N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------RSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 223 SLPHPFALTLFEDTLY-----------WTDW 242
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 141/329 (42%), Gaps = 93/329 (28%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI--------- 126
G CS +C + K Y C+C G L + TCK + + L+++ R +
Sbjct: 291 GGCSHLCLMSPVKPFYQCACPTGVTLLENGKTCK--DGATELLLLARRTDLRRISLDTPD 348
Query: 127 ---LVADLEE------------------KGKDHRA-----------QDIVVSGLDLVEGL 154
+V LE+ + RA Q +V + + +G+
Sbjct: 349 FTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGI 408
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++LDP G +++WTDWG
Sbjct: 409 AVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVG--YMYWTDWG 466
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
E P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K D
Sbjct: 467 EIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTD-------------- 512
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
KI N DG+ +LV ++ L +Y
Sbjct: 513 --------------------KIEVMNTDGTGRRVLVEDKIPHIFGFTLLGDYVY------ 546
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ + R II
Sbjct: 547 -----WTDW-QRRSIERVHKRSAEREVII 569
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSDRFVIINTEIYWPNGLTLDYEERKLYWADAKLNFIHRSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 111/237 (46%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEDNGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLSGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I + + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLSGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPNQNLEIQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRSIGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPIALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ T I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDTNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QAGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSVPNQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSIGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 27/152 (17%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIER 351
L++ A NA+I+V G L +A ALD +G++Y W+D E I+R
Sbjct: 31 LRLVDAANGKENATIVVGG-LEDAAALDFVFSHGLIY-----------WSDVSEEA-IKR 77
Query: 352 IGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
I + + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 78 IEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL 137
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 -----------DQPRAIALDPSSGFMYWTDWG 158
>gi|296487237|tpg|DAA29350.1| TPA: low density lipoprotein receptor-related protein 6 [Bos
taurus]
Length = 1631
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 115/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 97 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 156
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++
Sbjct: 157 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSDRFVIINTEIYWPNGLTLDYEERKL 214
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI ++N+DG+N +V G
Sbjct: 215 YWADAKLNFIH----------------------------------RSNLDGTNRQAVVKG 240
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 241 SLPHPFALTLFEDTLY-----------WTDW 260
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 141/329 (42%), Gaps = 93/329 (28%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI--------- 126
G CS +C + K Y C+C G L + TCK + + L+++ R +
Sbjct: 309 GGCSHLCLMSPVKPFYQCACPTGVTLLENGKTCK--DGATELLLLARRTDLRRISLDTPD 366
Query: 127 ---LVADLEE------------------KGKDHRA-----------QDIVVSGLDLVEGL 154
+V LE+ + RA Q +V + + +G+
Sbjct: 367 FTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGI 426
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++LDP G +++WTDWG
Sbjct: 427 AVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVG--YMYWTDWG 484
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
E P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K D
Sbjct: 485 EIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTD-------------- 530
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
KI N DG+ +LV ++ L +Y
Sbjct: 531 --------------------KIEVMNTDGTGRRVLVEDKIPHIFGFTLLGDYVY------ 564
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ + R II
Sbjct: 565 -----WTDW-QRRSIERVHKRSAEREVII 587
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 126 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 171
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++Y+AD+KL+FI N D
Sbjct: 172 -WTDWGEVPKIERAGMDGSDRFVIINTEIYWPNGLTLDYEERKLYWADAKLNFIHRSNLD 230
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 231 GTNRQAVVKGSLPHPFALTLFED 253
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 111/237 (46%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 608 NPCAEDNGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 664
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 665 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 724
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 725 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 782
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 783 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 838
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 660 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 719
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 720 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 775
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 776 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 823
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 824 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 854
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 909 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 965
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 966 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1021
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1022 VSSVPNQNLEIQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRSIGVVLKGEQDRPR 1078
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1079 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1106
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1107 DGTEREVLFFSGLSKPVALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1156
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ T I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1157 LEDTNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1209
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 791 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 849
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 850 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 904
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 905 QAGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 964
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 965 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1021
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1022 VSSVPNQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSIGVV------------ 1069
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1070 LKGEQDRPRAIVVNPEKGYMYFT 1092
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 27/152 (17%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIER 351
L++ A NA+I+V G L +A ALD +G++Y W+D E I+R
Sbjct: 49 LRLVDAANGKENATIVVGG-LEDAAALDFVFSHGLIY-----------WSDVSEEA-IKR 95
Query: 352 IGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
I + + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 96 IEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL 155
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 156 -----------DQPRAIALDPSSGFMYWTDWG 176
>gi|426225504|ref|XP_004006905.1| PREDICTED: low-density lipoprotein receptor-related protein 6
isoform 2 [Ovis aries]
Length = 1568
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 115/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++
Sbjct: 139 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSDRFVIINTEIYWPNGLTLDYEERKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI ++N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------RSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 223 SLPHPFALTLFEDTLY-----------WTDW 242
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 141/329 (42%), Gaps = 93/329 (28%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI--------- 126
G CS +C + K Y C+C G L + TCK + + L+++ R +
Sbjct: 291 GGCSHLCLMSPVKPFYQCACPTGVTLLENGKTCK--DGATELLLLARRTDLRRISLDTPD 348
Query: 127 ---LVADLEE------------------KGKDHRA-----------QDIVVSGLDLVEGL 154
+V LE+ + RA Q +V + + +G+
Sbjct: 349 FTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGI 408
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++LDP G +++WTDWG
Sbjct: 409 AVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVG--YMYWTDWG 466
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
E P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K D
Sbjct: 467 EIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTD-------------- 512
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
KI N DG+ +LV ++ L +Y
Sbjct: 513 --------------------KIEVMNTDGTGRRVLVEDKIPHIFGFTLLGDYVY------ 546
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ + R II
Sbjct: 547 -----WTDW-QRRSIERVHKRSAEREVII 569
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSDRFVIINTEIYWPNGLTLDYEERKLYWADAKLNFIHRSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 111/237 (46%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEDNGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLSGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I + + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLSGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPNQNLEIQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRSIGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPIALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ T I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDTNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QAGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSVPNQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSIGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 27/152 (17%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIER 351
L++ A NA+I+V G L +A ALD +G++Y W+D E I+R
Sbjct: 31 LRLVDAANGKENATIVVGG-LEDAAALDFVFSHGLIY-----------WSDVSEEA-IKR 77
Query: 352 IGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
I + + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 78 IEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL 137
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 -----------DQPRAIALDPSSGFMYWTDWG 158
>gi|359065818|ref|XP_003586159.1| PREDICTED: low-density lipoprotein receptor-related protein 6
isoform 2 [Bos taurus]
Length = 1568
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 115/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++
Sbjct: 139 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSDRFVIINTEIYWPNGLTLDYEERKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI ++N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------RSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 223 SLPHPFALTLFEDTLY-----------WTDW 242
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 141/329 (42%), Gaps = 93/329 (28%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI--------- 126
G CS +C + K Y C+C G L + TCK + + L+++ R +
Sbjct: 291 GGCSHLCLMSPVKPFYQCACPTGVTLLENGKTCK--DGATELLLLARRTDLRRISLDTPD 348
Query: 127 ---LVADLEE------------------KGKDHRA-----------QDIVVSGLDLVEGL 154
+V LE+ + RA Q +V + + +G+
Sbjct: 349 FTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGI 408
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++LDP G +++WTDWG
Sbjct: 409 AVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVG--YMYWTDWG 466
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
E P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K D
Sbjct: 467 EIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTD-------------- 512
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
KI N DG+ +LV ++ L +Y
Sbjct: 513 --------------------KIEVMNTDGTGRRVLVEDKIPHIFGFTLLGDYVY------ 546
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ + R II
Sbjct: 547 -----WTDW-QRRSIERVHKRSAEREVII 569
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSDRFVIINTEIYWPNGLTLDYEERKLYWADAKLNFIHRSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 111/237 (46%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEDNGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPNQNLEIQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRSIGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPVALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ T I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDTNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QAGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSVPNQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSIGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 27/152 (17%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIER 351
L++ A NA+I+V G L +A ALD +G++Y W+D E I+R
Sbjct: 31 LRLVDAANGKENATIVVGG-LEDAAALDFVFSHGLIY-----------WSDVSEEA-IKR 77
Query: 352 IGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
I + + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 78 IEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL 137
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 -----------DQPRAIALDPSSGFMYWTDWG 158
>gi|296218979|ref|XP_002755686.1| PREDICTED: low-density lipoprotein receptor-related protein 5
[Callithrix jacchus]
Length = 1675
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 126/245 (51%), Gaps = 48/245 (19%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + L
Sbjct: 159 VQNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIAL 218
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
+P+ G +++WTDWGE PRIER GMDG+ R+ I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 219 NPAHG--YMYWTDWGEMPRIERAGMDGTTRNIIVDSDIYWPNGLTIDLEEQKLYWADAKL 276
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
FI +AN+DGS +V G L A
Sbjct: 277 SFIH----------------------------------RANLDGSFRQKVVEGSLTHPFA 302
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L L LY WTDW G R I+S +Y P + +
Sbjct: 303 LTLSGDTLY-----------WTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQE 350
Query: 380 RRVYF 384
R+ +F
Sbjct: 351 RQPFF 355
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 149/344 (43%), Gaps = 71/344 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKG 89
C+ G CS+ C +P+ C CP G L ++ TC+ E+ ++ +
Sbjct: 358 RCEEDNGGCSHLCLLSPVEPFYKCACPTGVQLQDNGRTCK--AGAEEVLLLARRTDLRRI 415
Query: 90 SYICSCNEGYVLEYDNHTCKAINHSAA----------FLIISNRHSILVADLEEKGKDHR 139
S VL+ D+ I H+ A + +I A L+ G
Sbjct: 416 SLDTPDFTDIVLQVDD-----IRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSG---- 466
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ ++ + ++ +G+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR + L
Sbjct: 467 AQTLINTDINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIAL 526
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G ++WTDWGENP+IE +DG R +++ + WPNGL LD+ ++Y+ D+K
Sbjct: 527 HPVMGL--MYWTDWGENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYWGDAKT 584
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N+DG+ L+ +L
Sbjct: 585 D----------------------------------KIEVINVDGTKRRTLLEDKLPHIFG 610
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ ++R II
Sbjct: 611 FTLLGDFIY-----------WTDW-QRRSIERVHKVKASRDIII 642
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 85/144 (59%), Gaps = 13/144 (9%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRW 337
+ +KLYW D N +I AN++G++ +L L + A+ L Y
Sbjct: 178 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALNPAHGY--------- 224
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
++WTDWGE PRIER GMDG+ R+ I+ + IYWPNGLT+D+ +++Y+AD+KL FI N
Sbjct: 225 MYWTDWGEMPRIERAGMDGTTRNIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANL 284
Query: 398 DGTGRQQVILIDLMVEFTNDLMGD 421
DG+ RQ+V+ L F L GD
Sbjct: 285 DGSFRQKVVEGSLTHPFALTLSGD 308
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 147/349 (42%), Gaps = 95/349 (27%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE 132
E G CS +C + + Y C+C G L+ + TCKA + L+++ R
Sbjct: 361 EDNGGCSHLCLLSPVEPFYKCACPTGVQLQDNGRTCKA--GAEEVLLLARR--------- 409
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
+ L RI + + T+ IVL D+I
Sbjct: 410 -----------------------------------TDLRRISLDTPDFTD-IVLQVDDIR 433
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
+ DP G +++WTD E I R +DGS T+I+T I P+G+ +D
Sbjct: 434 HAIAIDYDPLEG--YVYWTD-DEVRAIRRAYLDGSGAQTLINTDINDPDGIAVDW----- 485
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+ R LYW D G + +I ++G++ ILVS
Sbjct: 486 -------------------------VARNLYWTDTGTD----RIEVTRLNGTSRKILVSE 516
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
L E A+ L M ++WTDWGENP+IE +DG R +++ + WPNG
Sbjct: 517 DLDEPRAIALHPVMGL---------MYWTDWGENPKIECANLDGQERRVLVNASLGWPNG 567
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
L LD+ ++Y+ D+K D I+ N DGT R+ ++ L F L+GD
Sbjct: 568 LALDLQEGKLYWGDAKTDKIEVINVDGTKRRTLLEDKLPHIFGFTLLGD 616
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 108/237 (45%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C ++ G CS +C T S C C G L D TC AFL+ ++R +I
Sbjct: 663 NPCADENGGCSHLCFFTPRSTRCGCPIGLELLSDMKTCIV---PEAFLVFTSRAAIHRIS 719
Query: 131 LEEKGKD----------------------------------------HRAQDIVVSGLDL 150
LE D + +V GLD
Sbjct: 720 LETNNNDVAIPLTGVKEASALDFDVANNHIYWTDVSLKTISRAFLNGSSVEHVVEFGLDY 779
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR + LDP+ G +++W
Sbjct: 780 PEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTEG--YIYW 837
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG PRI R MDG+N T++ K+ N LT+D RR+Y+ D + I+ ++
Sbjct: 838 TEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYTDRRLYWTDLDTNMIESSNM 893
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 138/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ C F
Sbjct: 951 DILVFHSSRQDGLNDCVHDNGQCGQLCLAIPGGHRCGCASHYTLDPSGRNCSP---PTTF 1007
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+V+ GL V+ + YD + IYW+D R N I
Sbjct: 1008 LLFSQKSAISRMIPD------DQHSPDLVLPLHGLRNVKAIDYDPLDKFIYWVDGRQN-I 1060
Query: 174 EVCDENGTNRIVL-----AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT VL A++ QP + +D +R LFWT N I + G
Sbjct: 1061 KRAKDDGTQPFVLTSLSQAQNPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLSGEA 1117
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1118 IGVVLRGDRDKPRAIVVNAERGYLYFTNMQ---------------------------DRA 1150
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A +DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1151 A-----KIERAALDGTEREVLFTTGLIRPVALVVDNALGK---------LFWAD-ADLKR 1195
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT + + +Y+ D + I+
Sbjct: 1196 IESCDLSGANRLTLEDANIVQPLGLT--VLGKHLYWIDRQQQMIE 1238
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D+A +Y+ D L F++ S+E ++
Sbjct: 715 IHRISLETNNNDVAIPLTGVKEASALDFDVANNHIYWTDVSLKTISRAFLNGSSVEHVVE 774
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 775 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 830
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D RR+
Sbjct: 831 TEGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYTDRRL 878
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ N G+++V++ D
Sbjct: 879 YWTDLDTNMIESSNM--LGQERVVIAD 903
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 146/359 (40%), Gaps = 66/359 (18%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D ++I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 236 IERAGMDGTTRNIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 295
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 296 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQE 350
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG----------- 297
R+ +F + D C L + + V + NG K G
Sbjct: 351 RQPFFHTRCEEDNGGCSHLCLLSPVEPFYKCACPTGVQLQDNGRTCKAGAEEVLLLARRT 410
Query: 298 ---KANMDGSNAS--ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+ ++D + + +L + A+A+D Y L+ +++WTD E I R
Sbjct: 411 DLRRISLDTPDFTDIVLQVDDIRHAIAID-------YDPLEG--YVYWTD-DEVRAIRRA 460
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL-- 410
+DGS T+I+T I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 461 YLDGSGAQTLINTDINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDE 520
Query: 411 ----MVEFTNDLM-----GDN---------------------GVP-ALALDLENGMLYY 438
+ LM G+N G P LALDL+ G LY+
Sbjct: 521 PRAIALHPVMGLMYWTDWGENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYW 579
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N +L +N A +E D ++++ +GL L
Sbjct: 1119 GVVLRGDRDKPRAIVVNAERGYLYFTNMQD-RAAKIERAALDGTEREVLFTTGLIRPVAL 1177
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W D+ L RIE CD +G NR+ L NI QP G+ + + L+W D
Sbjct: 1178 VVDNALGKLFWADADLKRIESCDLSGANRLTLEDANIVQPLGLTV----LGKHLYWID-R 1232
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T I ++ G+
Sbjct: 1233 QQQMIERVEKTTGDKRTRIQGRVTHLTGI 1261
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 28/159 (17%)
Query: 307 SILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTII 363
+++VSG L +A A+D + G++Y WTD E + + G ++
Sbjct: 116 TVVVSG-LEDAAAVDFQFSKGVVY-----------WTDVSEEAIKQTYLNHTGVAVQNVV 163
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNG 423
+ + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 164 ISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------DQ 212
Query: 424 VPALALDLENGMLYYST--EGAEFLKTPLFCITRNYFLD 460
A+AL+ +G +Y++ E + + TRN +D
Sbjct: 213 PRAIALNPAHGYMYWTDWGEMPRIERAGMDGTTRNIIVD 251
>gi|395851788|ref|XP_003798434.1| PREDICTED: low-density lipoprotein receptor-related protein 5
[Otolemur garnettii]
Length = 1628
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 111/203 (54%), Gaps = 47/203 (23%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + LD
Sbjct: 113 QNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALD 172
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 173 PAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLDEQKLYWADAKLS 230
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
FI +AN+DGS +V G L AL
Sbjct: 231 FIH----------------------------------RANLDGSFRQKVVEGSLTHPFAL 256
Query: 321 DLENGMLYYSTLKCTRWLFWTDW 343
L LY WTDW
Sbjct: 257 TLSGDTLY-----------WTDW 268
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 148/356 (41%), Gaps = 89/356 (25%)
Query: 49 LGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNH 106
LGAL + ++LS + E G CS +C + + Y C+C G L+ +
Sbjct: 288 LGALYSPMDIQVLSPERQPSFHTQCEEDNGGCSHLCLLSPREPFYTCACPTGVQLQDNGK 347
Query: 107 TCKAINHSAAFL----------------------IISNRHSILV-----------ADLEE 133
TCKA L + RH+I + D E
Sbjct: 348 TCKAGAEEVLLLARRTDLRRISLDTPDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEV 407
Query: 134 KGKDHR------AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
+ AQ +V + ++ +G+A DW+ ++YW D+ +RIEV NGT+R +L
Sbjct: 408 RAIRRAYLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILV 467
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+++ +PR ++L P G ++WTDWGENP+IE +DG R +++ + WPNGL LD+
Sbjct: 468 SEDLDEPRAIVLHPVMGL--MYWTDWGENPKIECANLDGQERRVLVNASLGWPNGLALDL 525
Query: 248 ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307
++Y+ D+K D KI N+DG+
Sbjct: 526 QEGKLYWGDAKTD----------------------------------KIEVINVDGTKRR 551
Query: 308 ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L+ +L L +Y WTDW + IER+ ++R II
Sbjct: 552 TLLEDKLPHIFGFTLLGDFIY-----------WTDW-QRRSIERVHKVKASRDVII 595
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 131 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 179
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 180 ----WTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLDEQKLYWADAKLSFIHRA 235
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 236 NLDGSFRQKVVEGSLTHPFALTLSGD 261
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 118/247 (47%), Gaps = 30/247 (12%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
C + G CS+ C TP C CP G E+LS DM C P +
Sbjct: 618 CADRNGGCSHLCFFTPRATRCGCPIGLELLS-------DMKTCIVPEAFLVFTSRAAIHR 670
Query: 92 ICSCNEGYVLEYDNHTCK----AINHSAAF-LIISNRHSILVADLEEKG------KDHRA 140
I LE +N+ + ++A +SN H I D+ K
Sbjct: 671 IS-------LETNNNDVAIPLTGVKEASALDFDVSNNH-IYWTDVSLKTISRAFMNGSSV 722
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ ++ GLD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR + LD
Sbjct: 723 EHVIEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALD 782
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WT+WG PRI R MDG+N T++ K+ N LT+D +R+Y+ D +
Sbjct: 783 PTKG--YIYWTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYTDQRLYWTDLDTN 839
Query: 261 FIDCKSL 267
I+ ++
Sbjct: 840 MIESSNM 846
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 138/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C F
Sbjct: 904 DILVFHSSRQDGLNDCMHNNGQCGQLCLAVPGGHRCGCASHYTLDPSSRNCSP---PTTF 960
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+++ GL V + YD + IYW+D R N I
Sbjct: 961 LLFSQKCAISRMIPD------DQHSPDLILPLHGLRNVRAIDYDPLDKFIYWVDGRQN-I 1013
Query: 174 EVCDENGTNRIVL-----AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT VL ++ QP + +D +R LFWT N I + G
Sbjct: 1014 KRAKDDGTQPFVLTSPSQGQNPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLSGDA 1070
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ + P + ++ +YF TN+
Sbjct: 1071 MGVVLRGERDKPRAIVVNAERGYLYF----------------TNMQDRAA---------- 1104
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A +DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1105 ------KIERAALDGTEREVLFTTGLIRPVALVVDNALGK---------LFWVD-ADLKR 1148
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT + R +Y+ D + I+
Sbjct: 1149 IESCDLSGANRLTLEDANIVQPVGLT--VLGRHLYWTDRQQQMIE 1191
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E I+
Sbjct: 668 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIE 727
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 728 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 783
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D +R+
Sbjct: 784 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYTDQRL 831
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ N G+++V++ D
Sbjct: 832 YWTDLDTNMIESSNM--LGQERVVIAD 856
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 146/357 (40%), Gaps = 62/357 (17%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 189 IERAGMDGSTRKIIVDSDIYWPNGLTIDLDEQKLYWADAKLSFIHRANLDGSFRQKVVEG 248
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+ +Y P + +
Sbjct: 249 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGEKRKEILGA-LYSPMDIQVLSPE 303
Query: 250 RRVYF-ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI-GKANMDGSNAS 307
R+ F + D C L + + R+ ++ GV L+ GK G+
Sbjct: 304 RQPSFHTQCEEDNGGCSHLCLLSP-------REPFYTCACPTGVQLQDNGKTCKAGAEEV 356
Query: 308 ILVSGQL-YEALALDLENGMLYYSTLKCTR------------WLFWTDWGENPRIERIGM 354
+L++ + ++LD + + R +++WTD E I R +
Sbjct: 357 LLLARRTDLRRISLDTPDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTD-DEVRAIRRAYL 415
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL---- 410
DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 416 DGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPR 475
Query: 411 --MVEFTNDLM-----GDN---------------------GVP-ALALDLENGMLYY 438
++ LM G+N G P LALDL+ G LY+
Sbjct: 476 AIVLHPVMGLMYWTDWGENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYW 532
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVL--EYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL E D +N +L +N A +E D ++++ +GL L
Sbjct: 1072 GVVLRGERDKPRAIVVNAERGYLYFTNMQD-RAAKIERAALDGTEREVLFTTGLIRPVAL 1130
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + R L+WTD
Sbjct: 1131 VVDNALGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPVGLTV----LGRHLYWTD-R 1185
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T + ++ G+
Sbjct: 1186 QQQMIERVEKTTGDKRTRVQGRVAHLTGI 1214
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 306 ASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTI 362
++I+VSG L +A A+D + G +Y WTD E + + G+ +
Sbjct: 68 STIVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAVQNV 115
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 116 VISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------D 164
Query: 423 GVPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 165 QPRAIALDPAHGYMYWTDWG 184
>gi|363733420|ref|XP_427861.3| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Gallus gallus]
Length = 2327
Score = 154 bits (388), Expect = 1e-34, Method: Composition-based stats.
Identities = 109/362 (30%), Positives = 167/362 (46%), Gaps = 66/362 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+N + VC G+ DC +G+DEG C L C+ CS C+P+P G C C PG L+ D
Sbjct: 1357 CLNASLVCSGQQDCADGSDEGGNCSLP-CQRP---CSQLCYPSPQGPRCWCTPGYQLAED 1412
Query: 65 SVTCQDMNECEQPG--YCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII-- 120
++C D++EC + G CSQ+C N G+Y C C GY+LE D H CK L+
Sbjct: 1413 GMSCVDVDECTEQGKRTCSQICLNAPGTYSCGCLSGYLLEPDGHICKLSGPEPMLLVAVQ 1472
Query: 121 ---------SNRHSILVADLEEKG---------------KDHRAQDIVVSGLD------L 150
S R +L+ +E+ D + I LD L
Sbjct: 1473 SEVLSYGLRSGREEVLLTSDKERTIFSLDYDLVERKVFWMDLATESISWQSLDSRKKGTL 1532
Query: 151 VEG-----LAYDWIGGHIYWLDSRLNRIEVCDENGTNR------IVLAKDNITQPRGMML 199
V+G +A DWIG ++YW D ++ T R +VL D + QP ++L
Sbjct: 1533 VKGVRSDCIAVDWIGRNLYWTDGVAGQVLATSLETTWRGKPEYTMVLDGD-LDQPHSLVL 1591
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK- 258
P G L+W++ G PR+ MDG + +++ + WP L LD+ T R+++ D K
Sbjct: 1592 QPLAGM--LYWSEVGNQPRLMEATMDGRRQRVLLAQGLGWPTALALDLPTSRLFWLDEKL 1649
Query: 259 -------LDFIDCKSLE---IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
LD D K L+ +++ + +LYW + V ++ KA G N ++
Sbjct: 1650 GSVGSTHLDGTDVKVLQLRWVQSPFAAAVCEGQLYWSERKAWSVQ-QVDKAT--GKNRTV 1706
Query: 309 LV 310
L+
Sbjct: 1707 LL 1708
Score = 81.6 bits (200), Expect = 7e-13, Method: Composition-based stats.
Identities = 84/323 (26%), Positives = 128/323 (39%), Gaps = 80/323 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSN--------------TCHPTPLG 50
C+ ++CD DC +G DE GC L C C N C +
Sbjct: 268 CIPHWELCDRHQDCEDGWDE-EGCPLQPCLPGQWQCRNRVCIVAEWKCNGVDDCGDSSDE 326
Query: 51 ALCT-CPPGEILSND------SVTCQDMNEC----EQP-----------GYCSQMCTNTK 88
+C CPPG + ++ S+ C D ++C ++P G C++ CT+T
Sbjct: 327 DICAPCPPGMVRCDEGKCILESLMCNDEDDCLDGTDEPSTCGRSCFVRNGGCAESCTDTH 386
Query: 89 GSYICSCNEGYVLEYDNHTCK--------AINHSAAFL---------IISNRHSI--LVA 129
CSC G+VL+ D +C A+ A L ++S + LV
Sbjct: 387 WGVQCSCGSGWVLQADGQSCADNATQLLVAVGEDLALLDVRTQTYRPVLSTEAELRALVY 446
Query: 130 D--------LEEKGK-----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
D L E+G+ + ++ + V ++ DW G +YW S + +C
Sbjct: 447 DLLRETYYWLTEEGELCAHLPGKGVQLLYADAGEVNSISVDWFTGQLYWASS--HPAAIC 504
Query: 177 DENGTNR---IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPR--IERIGMDGSNRST 231
G R VL KD + + L P R L+W + G R I GMDGSNR
Sbjct: 505 AGLGDGRGYVTVLGKDVVPE----QLTVYPSARSLYWVNRGLRGRTVIAAAGMDGSNRQE 560
Query: 232 IISTKIYWPNGLTLDIATRRVYF 254
+ + P GL+LD R+Y+
Sbjct: 561 LTVVSMEEPVGLSLDYVAGRLYW 583
Score = 57.4 bits (137), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 33/176 (18%)
Query: 243 LTLDIATRRVYFADSKLDFIDCKSLEIKTN-----------VNYSTIFRKLYWIDEGGNG 291
L D+ R+V++ D + I +SL+ + + I R LYW D G
Sbjct: 1500 LDYDLVERKVFWMDLATESISWQSLDSRKKGTLVKGVRSDCIAVDWIGRNLYWTD----G 1555
Query: 292 VPLKIGKANMDGS-----NASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWG 344
V ++ +++ + ++++ G L + +L L+ GMLY W++ G
Sbjct: 1556 VAGQVLATSLETTWRGKPEYTMVLDGDLDQPHSLVLQPLAGMLY-----------WSEVG 1604
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
PR+ MDG + +++ + WP L LD+ T R+++ D KL + + DGT
Sbjct: 1605 NQPRLMEATMDGRRQRVLLAQGLGWPTALALDLPTSRLFWLDEKLGSVGSTHLDGT 1660
Score = 52.4 bits (124), Expect = 5e-04, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Query: 125 SILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
SI + L++ G+ + + V G+ V LA DW+ G++YW++ + I V G +
Sbjct: 1835 SIGLLRLKDSGRLSWKKVVAVEGM--VVSLALDWLSGNLYWIEGQPTSIHVATAGGRWAL 1892
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP--RIERIGMDGSNRSTIISTKIYWPNG 242
VL + + + L P T P +E MDGS R + S + P G
Sbjct: 1893 VLLSEGLQGAAWLALCPRASTMCFITAAGSRRPGAAVECAAMDGSGRRVVWS-RARSPAG 1951
Query: 243 LTLDIATRRVYFADSK 258
LT A+ R+Y+AD +
Sbjct: 1952 LTFGGASTRLYWADQE 1967
Score = 46.6 bits (109), Expect = 0.024, Method: Composition-based stats.
Identities = 44/157 (28%), Positives = 61/157 (38%), Gaps = 28/157 (17%)
Query: 275 YSTIFRKLYWIDEGG--------NGVPLKIGKANMDGSNASILVSGQLY------EALAL 320
Y + YW+ E G GV L A S + +GQLY A+
Sbjct: 446 YDLLRETYYWLTEEGELCAHLPGKGVQLLYADAGEVNSISVDWFTGQLYWASSHPAAICA 505
Query: 321 DLENGMLYYSTL------------KCTRWLFWTDWGENPR--IERIGMDGSNRSTIISTK 366
L +G Y + L R L+W + G R I GMDGSNR +
Sbjct: 506 GLGDGRGYVTVLGKDVVPEQLTVYPSARSLYWVNRGLRGRTVIAAAGMDGSNRQELTVVS 565
Query: 367 IYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403
+ P GL+LD R+Y+ + I+ DG+GR
Sbjct: 566 MEEPVGLSLDYVAGRLYWISEYKESIETLRVDGSGRH 602
>gi|444722393|gb|ELW63090.1| Very low-density lipoprotein receptor [Tupaia chinensis]
Length = 954
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/450 (28%), Positives = 202/450 (44%), Gaps = 75/450 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDISKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQDIV---------------------V 145
NR I LE K D AQ + V
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 506
Query: 146 SGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+D V +A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTR-----------WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
G +LF G N ++ M+G +R +++ I WPNG+TLD+ R
Sbjct: 567 SGFVSVFPITLPFGCYLFTGQTGVN-QLRSKRMNGFDRRPLVTVDIQWPNGITLDLIKSR 625
Query: 252 VYFADSKLDFIDC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGK 298
+Y+ DSKL + KSLE + TIF ++YWID V G
Sbjct: 626 LYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGA 682
Query: 299 ANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSN 358
GS + LV+ L +A + + + ++ S L +R L+W D + + + ++G +
Sbjct: 683 NKFTGSELATLVN-NLNDAQDIIVYHELVQPSDLIKSR-LYWLD-SKLHMLSSVDLNGQD 739
Query: 359 RSTIISTKIYWPNGLTLDIATRRVYFADSK 388
R ++ + + + L L I RVY+ D +
Sbjct: 740 RRIVLKSLEFLAHPLALTIFEDRVYWIDGE 769
>gi|73997175|ref|XP_534886.2| PREDICTED: low-density lipoprotein receptor-related protein 6
isoform 1 [Canis lupus familiaris]
Length = 1613
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 115/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD +++
Sbjct: 139 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFVIINTEIYWPNGLTLDYEEQKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 223 SLPHPFALTLFEDTLY-----------WTDW 242
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 394 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 454 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKT 511
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 512 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 537
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 538 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREIII 569
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD +++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFVIINTEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 395 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 472 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPNQNLEIQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRSIGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPIALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QAGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSVPNQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSIGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 23/150 (15%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
L++ A NA+I+V G L +A A+D G ++W+D E I+R
Sbjct: 31 LRLVDATNGKENATIVVGG-LEDAAAVDFVFGH---------GLIYWSDVSEEA-IKRTE 79
Query: 354 MDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 80 FNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL-- 137
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 ---------DQPRAIALDPSSGFMYWTDWG 158
>gi|195573965|ref|XP_002104960.1| GD18176 [Drosophila simulans]
gi|194200887|gb|EDX14463.1| GD18176 [Drosophila simulans]
Length = 626
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 141/299 (47%), Gaps = 59/299 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ KVC+ + DCPNG DE G C + EC K G C + C +G C C G
Sbjct: 110 CIPNAKVCNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQCVNLEVGYRCECQDGY---- 165
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
P +C N G++ C C GY+ NHT CKA + A L+++
Sbjct: 166 -----------NWPPINIPVCVNEIGAFKCECEAGYMRLLKNHTRCKA-SEGHASLLLAR 213
Query: 123 RHSILVADLEEKG-------------------------KDHRAQDIVVSGLD-------- 149
RH I L+ D Q I + +D
Sbjct: 214 RHDIRKIALDRPEMTSIVNSTKAATALDFVFRTGMIFWSDVATQSIYKAPIDEGNDRTVV 273
Query: 150 ------LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+GLA DWI H+Y+ D+ IE+ + G+ VL KD++ PR + LDP
Sbjct: 274 LTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLIKDSLDIPRSIALDPIE 333
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G W++W+DWG +PRIER GMDGS+R+ II+ + WPNG+TLD+ +R+Y+ D KL+ I
Sbjct: 334 G--WMYWSDWGASPRIERAGMDGSHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTI 390
>gi|432107727|gb|ELK32887.1| Low-density lipoprotein receptor-related protein 6 [Myotis davidii]
Length = 1597
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 115/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 75 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 134
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++
Sbjct: 135 QPRAIALDPSSG--FIYWTDWGEVPKIERAGMDGSSRFVIINTEIYWPNGLTLDYEERKL 192
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG++ +V G
Sbjct: 193 YWADAKLNFIH----------------------------------KSNLDGTDRQAVVKG 218
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 219 SLPHPFALTLFEDTLY-----------WTDW 238
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 390 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 449
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 450 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKT 507
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 508 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 533
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 534 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREIII 565
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 104 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFIY---------- 149
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++Y+AD+KL+FI N D
Sbjct: 150 -WTDWGEVPKIERAGMDGSSRFVIINTEIYWPNGLTLDYEERKLYWADAKLNFIHKSNLD 208
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 209 GTDRQAVVKGSLPHPFALTLFED 231
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 120/242 (49%), Gaps = 20/242 (8%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTC---QDMNECEQPGYCSQMCTNTKG 89
C + G CS+ C P G C CP G L +D TC + + ++ T
Sbjct: 588 CADENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIVPEAFLLFSRRADIRRISLETNN 647
Query: 90 SYIC----SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVV 145
+ + E L++D + + + + +I A + +H +V
Sbjct: 648 NNVAIPLTGVKEASALDFD------VTDNRIYWTDISLKTISRAFMNGSALEH----VVE 697
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
GLD EG+A DW+G ++YW D+ NRIE +G +R VL ++ PR + LDP+ G
Sbjct: 698 FGLDYPEGMAVDWLGKNLYWADTGTNRIEASKLDGQHRQVLVWKDLDSPRALALDPAEG- 756
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+++WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+
Sbjct: 757 -FMYWTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESS 814
Query: 266 SL 267
++
Sbjct: 815 NM 816
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 335 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGS 390
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 391 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 420
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 421 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 467
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 468 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDK 527
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 528 IPHIFGFTLLGD 539
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 124/298 (41%), Gaps = 66/298 (22%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 887 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 943
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI--- 184
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 944 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQNLEIQ 999
Query: 185 ----------------------------------VLAKDNITQPRGMMLDPSPGTRWLFW 210
V+ K +PR ++++P G ++++
Sbjct: 1000 PYDLSIDIYSRYIYWTCEATNVITVTRLDGRSIGVVLKGEQDRPRAIVVNPEKG--YMYF 1057
Query: 211 TDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE- 268
T+ E +P+IER +DG+ R + + + P L LD ++++ADS L I+ L
Sbjct: 1058 TNLQERSPKIERAALDGTEREVLFFSGLSKPVALALDSRLGKLFWADSDLRRIESSDLSG 1117
Query: 269 ----------IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE 316
I V + LYWID+ I K +M G V ++ +
Sbjct: 1118 ANRIVLEDSNILQPVGLTVFENWLYWIDKQQQ----MIEKIDMTGREGRTKVQARIAQ 1171
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 638 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 697
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 698 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEASKLDGQHRQVLVWKDLDSPRALALDP 753
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 754 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 801
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 802 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 832
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 119/317 (37%), Gaps = 35/317 (11%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 769 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 827
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 828 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 882
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 883 QAGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 942
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS I
Sbjct: 943 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQNLEI- 998
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNG 423
P L++DI +R +Y+ + I DG V L G+
Sbjct: 999 -----QPYDLSIDIYSRYIYWTCEATNVITVTRLDGRSIGVV------------LKGEQD 1041
Query: 424 VP-ALALDLENGMLYYS 439
P A+ ++ E G +Y++
Sbjct: 1042 RPRAIVVNPEKGYMYFT 1058
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 27/152 (17%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIER 351
L++ A NA+I+V G L +A A+D ++G++Y W+D E I+R
Sbjct: 27 LRLVDATNGKENATIVVGG-LEDAAAVDFVFDHGLIY-----------WSDVSEEA-IKR 73
Query: 352 IGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 74 TEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL 133
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 134 -----------DQPRAIALDPSSGFIYWTDWG 154
>gi|332232729|ref|XP_003265556.1| PREDICTED: low-density lipoprotein receptor-related protein 6
isoform 1 [Nomascus leucogenys]
Length = 1613
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 117/214 (54%), Gaps = 47/214 (21%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++
Sbjct: 139 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFVIINSEIYWPNGLTLDYEEQKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
L AL L +LY WTDW +
Sbjct: 223 SLPHPFALTLFEDILY-----------WTDWSTH 245
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 394 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 454 DPMVG--YMYWTDWGEIPKIERAALDGSDRVILVNTSLGWPNGLALDYDEGKIYWGDAKT 511
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 512 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 537
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 538 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREVII 569
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFVIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 395 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 472 ERAALDGSDRVILVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRSVGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPIALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSVGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 27/152 (17%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIER 351
L++ A NA+I+V G L +A A+D +G++Y W+D E I+R
Sbjct: 31 LRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIY-----------WSDVSEEA-IKR 77
Query: 352 IGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 78 TEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL 137
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 -----------DQPRAIALDPSSGFMYWTDWG 158
>gi|432091031|gb|ELK24243.1| Low-density lipoprotein receptor-related protein 5 [Myotis davidii]
Length = 1144
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 111/204 (54%), Gaps = 47/204 (23%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + L
Sbjct: 75 VQNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIAL 134
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 135 DPAHG--YMYWTDWGETPRIERAGMDGSTRKVIVDSDIYWPNGLTIDLEEQKLYWADAKL 192
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
FI +AN+DGS +V G L A
Sbjct: 193 SFIH----------------------------------RANLDGSFRQKVVEGSLTHPFA 218
Query: 320 LDLENGMLYYSTLKCTRWLFWTDW 343
L L LY WTDW
Sbjct: 219 LTLSGDTLY-----------WTDW 231
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 151/339 (44%), Gaps = 61/339 (17%)
Query: 32 ECKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKG 89
+C+ G CS+ C +P C CP G L ++ TC+ E+ ++ +
Sbjct: 274 QCEEDNGGCSHLCLLSPREPFYTCACPTGVQLQDNGKTCK--AGAEEVLLLARRTDLRRI 331
Query: 90 SYICSCNEGYVLEYDN-HTCKAINHSA----AFLIISNRHSILVADLEEKGKDHRAQDIV 144
S VL+ D+ AI++ + +I A L+ G AQ +V
Sbjct: 332 SLDTPDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSG----AQTLV 387
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ ++ +G+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR + L P G
Sbjct: 388 NTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIALHPMMG 447
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
++WTDWGENP+IE +DG R +++T + WPNGL LD+ ++Y+ D+K D
Sbjct: 448 L--MYWTDWGENPKIECANLDGQERRVLVNTSLGWPNGLALDLQEGKLYWGDAKTD---- 501
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
KI N+DG+ +L+ +L L
Sbjct: 502 ------------------------------KIEVINVDGTKRRMLLEDKLPHIFGFTLLG 531
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+Y WTDW + IER+ ++R I+
Sbjct: 532 DFIY-----------WTDW-QRRSIERVHKVKASRDVIV 558
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 94 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 142
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 143 ----WTDWGETPRIERAGMDGSTRKVIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 198
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 199 NLDGSFRQKVVEGSLTHPFALTLSGD 224
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 152/352 (43%), Gaps = 96/352 (27%)
Query: 73 ECEQP-GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
+CE+ G CS +C + + Y C+C G L+ + TCKA + L+++ R
Sbjct: 274 QCEEDNGGCSHLCLLSPREPFYTCACPTGVQLQDNGKTCKA--GAEEVLLLARR------ 325
Query: 130 DLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+ L RI + + T+ IVL D
Sbjct: 326 --------------------------------------TDLRRISLDTPDFTD-IVLQVD 346
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
+I + DP G +++WTD E I R +DGS T+++T+I P+G+ +D
Sbjct: 347 DIRHAIAIDYDPLEG--YVYWTD-DEVRAIRRAYLDGSGAQTLVNTEINDPDGIAVDW-- 401
Query: 250 RRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL 309
+ R LYW D G + +I ++G++ IL
Sbjct: 402 ----------------------------VARNLYWTDTGTD----RIEVTRLNGTSRKIL 429
Query: 310 VSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYW 369
VS L E A+ L M ++WTDWGENP+IE +DG R +++T + W
Sbjct: 430 VSEDLDEPRAIALHPMMGL---------MYWTDWGENPKIECANLDGQERRVLVNTSLGW 480
Query: 370 PNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
PNGL LD+ ++Y+ D+K D I+ N DGT R+ ++ L F L+GD
Sbjct: 481 PNGLALDLQEGKLYWGDAKTDKIEVINVDGTKRRMLLEDKLPHIFGFTLLGD 532
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 121/249 (48%), Gaps = 34/249 (13%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPG----YCSQMC--- 84
C + G CS+ C TP C CP G E+LS DM C P + S+
Sbjct: 581 CADQNGGCSHLCFFTPRATKCGCPIGLELLS-------DMKTCIVPEAFLVFTSRATIHR 633
Query: 85 ------TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDH 138
N + E L++D ++++ + + +I A L +H
Sbjct: 634 ISLETNNNDVAIPLTGVKEASALDFD------VSNNHIYWTDVSLKTISRAFLNGSSVEH 687
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
++ GLD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR +
Sbjct: 688 ----VIEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLA 743
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
LDP+ G +++WT+WG PRI R MDG+N T++ K+ N LT+D A +R+Y+ D
Sbjct: 744 LDPTKG--YIYWTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLD 800
Query: 259 LDFIDCKSL 267
+ I+ ++
Sbjct: 801 TNMIESSNM 809
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 99/212 (46%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E I+
Sbjct: 631 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFLNGSSVEHVIE 690
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 691 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 746
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 747 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 794
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R VI DL F
Sbjct: 795 YWTDLDTNMIESSNMLGQDR-TVIADDLPHPF 825
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 33/216 (15%)
Query: 208 LFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC-- 264
++WTD E + + G+ ++ + + P+GL D +++Y+ DS+ + I+
Sbjct: 53 VYWTDVSEEAIKQTYLNQTGAAVQNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVAN 112
Query: 265 -----------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+ L+ + +YW D G +I +A MDGS ++V
Sbjct: 113 LNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGETP---RIERAGMDGSTRKVIVDSD 169
Query: 314 LY--EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
+Y L +DLE LY++ K + I R +DGS R ++ + P
Sbjct: 170 IYWPNGLTIDLEEQKLYWADAKLS------------FIHRANLDGSFRQKVVEGSLTHPF 217
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
LTL T +Y+ D + I CN +++ IL
Sbjct: 218 ALTLSGDT--LYWTDWQTRSIHACNKRTGEKRKEIL 251
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 145/357 (40%), Gaps = 62/357 (17%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + ++V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 152 IERAGMDGSTRKVIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 211
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+ +Y P + +
Sbjct: 212 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGEKRKEILRA-LYSPMDIQVLSPE 266
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI-GKANMDGSNAS 307
R+ Y + D C L + + R+ ++ GV L+ GK G+
Sbjct: 267 RQPYIHTQCEEDNGGCSHLCLLSP-------REPFYTCACPTGVQLQDNGKTCKAGAEEV 319
Query: 308 ILVSGQL-YEALALDLENGMLYYSTLKCTR------------WLFWTDWGENPRIERIGM 354
+L++ + ++LD + + R +++WTD E I R +
Sbjct: 320 LLLARRTDLRRISLDTPDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTD-DEVRAIRRAYL 378
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL---- 410
DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 379 DGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPR 438
Query: 411 --MVEFTNDLM-----GDN---------------------GVP-ALALDLENGMLYY 438
+ LM G+N G P LALDL+ G LY+
Sbjct: 439 AIALHPMMGLMYWTDWGENPKIECANLDGQERRVLVNTSLGWPNGLALDLQEGKLYW 495
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 74/174 (42%), Gaps = 42/174 (24%)
Query: 59 EILSNDSVTCQDMNECEQP-GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + CSC Y L+ + C + F
Sbjct: 867 DILVFHSSRQDGLNDCVHGNGQCGQLCLAVPGGHRCSCASHYTLDPSSRNCSP---PSTF 923
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S +++I ++ D D + D+V + GL V+ + YD + IYW+D R N
Sbjct: 924 LLFSQKNAISRMIPD------DQHSPDLVLPLHGLRNVKAIDYDPLDKFIYWVDGRQN-- 975
Query: 174 EVCDENGTNRIVLAKDNITQPRGMML-DPSPG---------------TRWLFWT 211
I A+D+ TQ +L PSP +R LFWT
Sbjct: 976 ----------IKRARDDGTQASPFILTTPSPNQSPDRQPHDLSIDVYSRTLFWT 1019
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 12/106 (11%)
Query: 338 LFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
++WTD E + + G+ ++ + + P+GL D +++Y+ DS+ + I+ N
Sbjct: 53 VYWTDVSEEAIKQTYLNQTGAAVQNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVAN 112
Query: 397 YDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+GT R+ + DL + A+ALD +G +Y++ G
Sbjct: 113 LNGTSRKVLFWQDL-----------DQPRAIALDPAHGYMYWTDWG 147
>gi|410963944|ref|XP_003988518.1| PREDICTED: low-density lipoprotein receptor-related protein 6
[Felis catus]
Length = 1621
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 115/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 87 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 146
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD +++
Sbjct: 147 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFIIINTEIYWPNGLTLDYEEQKL 204
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 205 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 230
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 231 SLPHPFALTLFEDTLY-----------WTDW 250
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 110/224 (49%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 402 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 461
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 462 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKT 519
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N+DG+ +LV ++
Sbjct: 520 D----------------------------------KIEVMNIDGTGRRVLVEDKIPHIFG 545
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 546 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREIII 577
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 598 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 654
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 655 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 714
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 715 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 772
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 773 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 828
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 116 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 161
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD +++Y+AD+KL+FI N D
Sbjct: 162 -WTDWGEVPKIERAGMDGSSRFIIINTEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 220
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 221 GTNRQAVVKGSLPHPFALTLFED 243
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 347 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGS 402
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 403 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 432
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 433 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 479
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 480 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNIDGTGRRVLVEDK 539
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 540 IPHIFGFTLLGD 551
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 650 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 709
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 710 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 765
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 766 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 813
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 814 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 844
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 899 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 955
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 956 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1011
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1012 VSSVPNQNLEIQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRSIGVVLKGEQDRPR 1068
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1069 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1096
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1097 DGTEREVLFFSGLSKPIALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1146
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1147 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1199
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 781 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 839
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 840 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 894
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 895 QAGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 954
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 955 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1011
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1012 VSSVPNQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSIGVV------------ 1059
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1060 LKGEQDRPRAIVVNPEKGYMYFT 1082
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 23/150 (15%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
L++ A NA+I+V G L +A A+D G ++W+D E I+R
Sbjct: 39 LRLVDATNGKENATIVVGG-LEDAAAVDFVFGH---------GLIYWSDVSEEA-IKRTE 87
Query: 354 MDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 88 FNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL-- 145
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 146 ---------DQPRAIALDPSSGFMYWTDWG 166
>gi|431908347|gb|ELK11944.1| Low-density lipoprotein receptor-related protein 6 [Pteropus
alecto]
Length = 1613
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 115/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD +++
Sbjct: 139 QPRAVALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFIIINTEIYWPNGLTLDYEEQKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 223 SLPHPFALTLFEDTLY-----------WTDW 242
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 394 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 454 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKT 511
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 512 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 537
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 538 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREIII 569
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAVALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD +++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFIIINTEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 395 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 472 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNSDNRTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNVIRKAQEDGSQGFTVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPNQNLEIQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRSIGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPIALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QAGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNSDNRTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-VIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSVPNQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSIGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 23/150 (15%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
L++ A NA+I+V G L +A A+D G ++W+D E I+R
Sbjct: 31 LRLVDATNGKENATIVVGG-LEDAAAVDFVFGH---------GLIYWSDVSEEA-IKRTE 79
Query: 354 MDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 80 FNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL-- 137
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 ---------DQPRAVALDPSSGFMYWTDWG 158
>gi|156405545|ref|XP_001640792.1| predicted protein [Nematostella vectensis]
gi|156227928|gb|EDO48729.1| predicted protein [Nematostella vectensis]
Length = 321
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 136/282 (48%), Gaps = 51/282 (18%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGS 90
EC + G CS+TC TP GA+C CP G L C D++EC E CSQ C NT G
Sbjct: 1 ECAERNGGCSDTCRNTPRGAVCECPIGLTLGGGGHACVDIDECAEGKDDCSQTCANTHGE 60
Query: 91 YICSCNEGYVLEYDNHTCKA----------INHSAAFLII-------------------- 120
Y C+C +GY H C+A I S +++
Sbjct: 61 YECACVDGYKQTAAGHGCQAKGQLGLSRLYITRSLKGVVVPAVIQYLHGEDGGLDYDYTN 120
Query: 121 -------SNRHSILVADLEEKGKDHRA-QDIVV----SGLDLVEGLAYDWIGGHIYWLDS 168
++RH I + L HRA D+ V V+G+A DW+G ++YW D
Sbjct: 121 ETVYWADNSRHVIYASQL------HRAWHDVTVLVQSKNTGRVDGIAVDWVGRNLYWTDD 174
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ IEV G +R L + ++ +PR ++LD G ++WTDWG P+IE+ MDG
Sbjct: 175 GRDTIEVASLRGRHRRTLFRTSLDRPRDIVLDSLSGI--MYWTDWGSAPKIEKSHMDGKG 232
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
R ++ I WPNGL+LD+ + R+Y+ D K I+ +L+ K
Sbjct: 233 REIMVFDNITWPNGLSLDLPSNRLYWTDGKHGTIESVTLDGK 274
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 18/203 (8%)
Query: 223 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD-FIDCKSLEIKTNVNYSTIFRK 281
G DG + +YW + I +++ A + + K+ + + R
Sbjct: 109 GEDGGLDYDYTNETVYWADNSRHVIYASQLHRAWHDVTVLVQSKNTGRVDGIAVDWVGRN 168
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA--LALDLENGMLYYSTLKCTRWLF 339
LYW D+G + + + A++ G + L L + LD +G++Y
Sbjct: 169 LYWTDDGRDTIEV----ASLRGRHRRTLFRTSLDRPRDIVLDSLSGIMY----------- 213
Query: 340 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
WTDWG P+IE+ MDG R ++ I WPNGL+LD+ + R+Y+ D K I+ DG
Sbjct: 214 WTDWGSAPKIEKSHMDGKGREIMVFDNITWPNGLSLDLPSNRLYWTDGKHGTIESVTLDG 273
Query: 400 TGRQQVILIDLMVEFTNDLMGDN 422
R+ + F+ + GD+
Sbjct: 274 KHRRSLFFGKHSHPFSLAVFGDH 296
>gi|395538731|ref|XP_003771328.1| PREDICTED: low-density lipoprotein receptor-related protein 6
[Sarcophilus harrisii]
Length = 1610
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 113/211 (53%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +GT R VL +
Sbjct: 76 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGTLRKVLFWQELD 135
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDP+ G +++WTDWGE P+IER GMDGSNR II+T IYWPNGLTLD ++
Sbjct: 136 QPRAIALDPANG--FMYWTDWGEVPKIERAGMDGSNRFIIINTDIYWPNGLTLDYEEEKL 193
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 194 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVRG 219
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 220 SLPHPFALTLFEDTLY-----------WTDW 239
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 391 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 450
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 451 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEEKIYWGDAKT 508
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 509 D----------------------------------KIEVMNADGTGRRVLVEDKIPHIFG 534
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 535 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREIII 566
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 84/143 (58%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DG+ +L +L + A+ALD NG +Y
Sbjct: 105 KLYWTDSETN----RIEVSNLDGTLRKVLFWQELDQPRAIALDPANGFMY---------- 150
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGSNR II+T IYWPNGLTLD ++Y+AD+KL+FI N D
Sbjct: 151 -WTDWGEVPKIERAGMDGSNRFIIINTDIYWPNGLTLDYEEEKLYWADAKLNFIHKSNLD 209
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 210 GTNRQAVVRGSLPHPFALTLFED 232
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 119/242 (49%), Gaps = 20/242 (8%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTC-------QDMNECEQPGYCSQMCT 85
C ++ G CS+ C P G C CP G L +D TC + +
Sbjct: 589 CANENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIVPEAFLLFSRRADIRRISLETNN 648
Query: 86 NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVV 145
N + E L++D + + + + +I A + +H +V
Sbjct: 649 NNVAIPLTGVKEASALDFD------VTDNRIYWTDISLKTISRAFMNGSSLEH----VVE 698
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
GLD EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G
Sbjct: 699 FGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG- 757
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+++WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+
Sbjct: 758 -FMYWTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESS 815
Query: 266 SL 267
++
Sbjct: 816 NM 817
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 336 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPLEG--YIYWTD-DEVRAIRRSFIDGSGS 391
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 392 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 421
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 422 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 468
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 469 ERAALDGSDRVVLVNTSLGWPNGLALDYDEEKIYWGDAKTDKIEVMNADGTGRRVLVEDK 528
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 529 IPHIFGFTLLGD 540
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ SLE ++
Sbjct: 639 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSSLEHVVE 698
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 699 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 754
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 755 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 802
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 803 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 833
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 132/330 (40%), Gaps = 76/330 (23%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S +++I
Sbjct: 888 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNTDNRTCSA---PTTFLLFSQKNAINRM 944
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI--- 184
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 945 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGLTVV 1000
Query: 185 ----------------------------------------------VLAKDNITQPRGMM 198
V+ K +PR +M
Sbjct: 1001 VSSVPNQNVDMQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRPVGVVLKGEQDRPRAIM 1060
Query: 199 LDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++P G ++++T+ E +P+IER +DG+ R + + + P L LD ++++ADS
Sbjct: 1061 VNPEKG--YMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADS 1118
Query: 258 KLDFIDCKSLE-----------IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
L I+ L I V + LYWID + KI +G
Sbjct: 1119 DLRRIESSDLSGANRIVLEDSNILQPVGLTVFENWLYWIDRQQQMIE-KIDMTGREGRTK 1177
Query: 307 SILVSGQLYEALALDLENGMLYYSTLKCTR 336
QL + A+ E +L Y C++
Sbjct: 1178 VQARIAQLSDIHAVK-ELNLLEYRQHPCSQ 1206
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 129/299 (43%), Gaps = 29/299 (9%)
Query: 128 VADLEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL 186
V +E G D + I++ + + GL D+ +YW D++LN I + +GTNR +
Sbjct: 157 VPKIERAGMDGSNRFIIINTDIYWPNGLTLDYEEEKLYWADAKLNFIHKSNLDGTNRQAV 216
Query: 187 AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 246
+ ++ P + L L+WTDW + + G + S I+ P +
Sbjct: 217 VRGSLPHPFALTLFEDT----LYWTDWNTHSILACNKYTGEGLREVHS-DIFSPMDIHAF 271
Query: 247 IATRRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP-LKIGKANMDGS 304
R+ + +D C L + + + K ++ GV L+ GK DG+
Sbjct: 272 NQQRQPNATNPCGIDNGGCSHLCLMSPI-------KPFYQCACPTGVKLLENGKTCKDGA 324
Query: 305 NASILVSGQL-YEALALDLENGMLYYSTLKCTR------------WLFWTDWGENPRIER 351
+L++ + ++LD + L+ R +++WTD E I R
Sbjct: 325 TELLLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPLEGYIYWTD-DEVRAIRR 383
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+DGS +++ +I P+G+ +D R +Y+ D+ D I+ +GT R+ +I DL
Sbjct: 384 SFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDL 442
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 770 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 828
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 829 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 883
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYW---IDEGGNGVPLKIGKANMDGSNAS 307
+ + + C L + V ++ D P + +
Sbjct: 884 QAGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNTDNRTCSAPTTFLLFSQKNAINR 943
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 944 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGLTVV 1000
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1001 VSSVPNQNVDMQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRPVGVV------------ 1048
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1049 LKGEQDRPRAIMVNPEKGYMYFT 1071
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 27/152 (17%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIER 351
L++ A NA+I+V G L +A A+D ++G++Y W+D E I+R
Sbjct: 28 LRLVDATNGKENATIVVGG-LEDAAAVDFVFDHGLIY-----------WSDVSEEA-IKR 74
Query: 352 IGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DGT R+ + +L
Sbjct: 75 TEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGTLRKVLFWQEL 134
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD NG +Y++ G
Sbjct: 135 -----------DQPRAIALDPANGFMYWTDWG 155
>gi|148236551|ref|NP_001084168.1| very low-density lipoprotein receptor precursor [Xenopus laevis]
gi|2366773|dbj|BAA22145.1| vitellogenin receptor [Xenopus laevis]
Length = 869
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/398 (29%), Positives = 182/398 (45%), Gaps = 74/398 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ KVC+ DC + +DE C++ EC G CS+ CH P+G C C G L
Sbjct: 329 ECIESNKVCNKHKDCKDWSDEPVKDCEVDECLENNGGCSHICHDLPIGYECECTAGFKLI 388
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ P CSQ+C N KG Y C C++GY ++ CKA+ LI +N
Sbjct: 389 -DRKTCGDIDECQNPEICSQICVNLKGGYKCECSKGYQMDPSTGVCKAVGREPC-LIFTN 446
Query: 123 RHSILVADLEEK---------------GKDHRAQDI--------------------VVSG 147
R I LE K D + Q + V S
Sbjct: 447 RRDIRKVGLERKEYIQLVEQLRNTVALDADIKEQSLFWADTIQKAIFRAPFDTREKVGSH 506
Query: 148 LDLVE------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+ +VE +A DWI +IYW+D+ L I V + +G+ R L + + +DP
Sbjct: 507 VKVVEDVHSPSAIAIDWIYKNIYWIDTILKTISVSNFDGSKRKTLFSSELQDLTSIAVDP 566
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++W+D GE +IE+ GM+G +R +I+ + P+G+ +D+ R+Y+ DSKL
Sbjct: 567 ISG--FIYWSDCGEPAKIEKAGMNGIDRQQLITADVQRPSGIAIDVVKSRLYWVDSKLHT 624
Query: 262 IDC------------KSLEIKTNVNYSTIFR-KLYWIDE------GGN---GVPLKIGKA 299
+ KS E + TIF ++YWID G N G L+
Sbjct: 625 LSSVDLNGQDRRVILKSHEFLAHPLALTIFEDRVYWIDGENEAIYGANKFSGQELETLVN 684
Query: 300 NMDGSNASILVSGQLYEALALD-----LENGMLYYSTL 332
N++ + I+V +L + L ++ +ENG Y L
Sbjct: 685 NLNDAQ-DIIVYHELIQPLGINWCNEQIENGGCKYLCL 721
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 17/131 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
I++ +YWID + I +N DGS L S +L + ++A+D +G +Y
Sbjct: 524 IYKNIYWIDT----ILKTISVSNFDGSKRKTLFSSELQDLTSIAVDPISGFIY------- 572
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
W+D GE +IE+ GM+G +R +I+ + P+G+ +D+ R+Y+ DSKL +
Sbjct: 573 ----WSDCGEPAKIEKAGMNGIDRQQLITADVQRPSGIAIDVVKSRLYWVDSKLHTLSSV 628
Query: 396 NYDGTGRQQVI 406
+ +G R+ ++
Sbjct: 629 DLNGQDRRVIL 639
>gi|397512540|ref|XP_003826599.1| PREDICTED: low-density lipoprotein receptor-related protein 6
isoform 1 [Pan paniscus]
Length = 1613
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 117/214 (54%), Gaps = 47/214 (21%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++
Sbjct: 139 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
L AL L +LY WTDW +
Sbjct: 223 SLPHPFALTLFEDILY-----------WTDWSTH 245
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 394 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 454 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKT 511
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 512 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 537
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 538 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREVII 569
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 395 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 472 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRSVGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPIALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSVGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 27/152 (17%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIER 351
L++ A NA+I+V G L +A A+D +G++Y W+D E I+R
Sbjct: 31 LRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIY-----------WSDVSEEA-IKR 77
Query: 352 IGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 78 TEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL 137
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 -----------DQPRAIALDPSSGFMYWTDWG 158
>gi|332232731|ref|XP_003265557.1| PREDICTED: low-density lipoprotein receptor-related protein 6
isoform 2 [Nomascus leucogenys]
Length = 1568
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 116/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++
Sbjct: 139 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFVIINSEIYWPNGLTLDYEEQKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L +LY WTDW
Sbjct: 223 SLPHPFALTLFEDILY-----------WTDW 242
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 394 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 454 DPMVG--YMYWTDWGEIPKIERAALDGSDRVILVNTSLGWPNGLALDYDEGKIYWGDAKT 511
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 512 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 537
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 538 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREVII 569
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFVIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 395 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 472 ERAALDGSDRVILVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRSVGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPIALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSVGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 27/152 (17%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIER 351
L++ A NA+I+V G L +A A+D +G++Y W+D E I+R
Sbjct: 31 LRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIY-----------WSDVSEEA-IKR 77
Query: 352 IGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 78 TEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL 137
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 -----------DQPRAIALDPSSGFMYWTDWG 158
>gi|426371721|ref|XP_004052790.1| PREDICTED: low-density lipoprotein receptor-related protein 6
isoform 1 [Gorilla gorilla gorilla]
Length = 1613
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 116/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++
Sbjct: 139 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L +LY WTDW
Sbjct: 223 SLPHPFALTLFEDILY-----------WTDW 242
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 394 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 454 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKT 511
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 512 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 537
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 538 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREVII 569
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 395 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 472 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 144/342 (42%), Gaps = 66/342 (19%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRSVGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPIALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403
+ + I P GLT + +Y+ D + I+ D TGR+
Sbjct: 1139 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGRE 1176
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 98 GYVL--EYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVV-SGLDLVEGL 154
G VL E D +N ++ +N +E D ++++ SGL L
Sbjct: 1049 GVVLKGEQDRPRAIVVNPEKGYMYFTNLQE-RSPKIERAALDGTEREVLFFSGLSKPIAL 1107
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A D G ++W DS L RIE D +G NRIVL NI QP G+ + WL+W D
Sbjct: 1108 ALDSRLGKLFWADSDLRRIESSDLSGANRIVLEDSNILQPVGLTV----FENWLYWID-K 1162
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IE+I M G T + +I +G+
Sbjct: 1163 QQQMIEKIDMTGREGRTKVQARIAQLSGI 1191
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSVGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 27/152 (17%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIER 351
L++ A NA+I+V G L +A A+D +G++Y W+D E I+R
Sbjct: 31 LRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIY-----------WSDVSEEA-IKR 77
Query: 352 IGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 78 TEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL 137
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 -----------DQPRAIALDPSSGFMYWTDWG 158
>gi|402885215|ref|XP_003906060.1| PREDICTED: low-density lipoprotein receptor-related protein 6
isoform 1 [Papio anubis]
Length = 1613
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 116/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++
Sbjct: 139 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L +LY WTDW
Sbjct: 223 SLPHPFALTLFEDILY-----------WTDW 242
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 394 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 454 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKT 511
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 512 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 537
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 538 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREVII 569
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 395 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 472 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRSIGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPIALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSIGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 23/150 (15%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
L++ A NA+I+V G L +A A+D G ++W+D E I+R
Sbjct: 31 LRLVDATNGKENATIVVGG-LEDAAAVDFVFGH---------GLIYWSDVSEEA-IKRTE 79
Query: 354 MDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 80 FNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL-- 137
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 ---------DQPRAIALDPSSGFMYWTDWG 158
>gi|383872963|ref|NP_001244648.1| low-density lipoprotein receptor-related protein 6 precursor
[Macaca mulatta]
gi|355564021|gb|EHH20521.1| Low-density lipoprotein receptor-related protein 6 [Macaca mulatta]
gi|355785908|gb|EHH66091.1| Low-density lipoprotein receptor-related protein 6 [Macaca
fascicularis]
gi|380812748|gb|AFE78248.1| low-density lipoprotein receptor-related protein 6 precursor
[Macaca mulatta]
Length = 1613
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 116/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++
Sbjct: 139 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L +LY WTDW
Sbjct: 223 SLPHPFALTLFEDILY-----------WTDW 242
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 394 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 454 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKT 511
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 512 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 537
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 538 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREVII 569
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 395 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 472 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYALNADNRTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRSIGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPIALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYALNADNRTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSIGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 23/150 (15%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
L++ A NA+I+V G L +A A+D G ++W+D E I+R
Sbjct: 31 LRLVDATNGKENATIVVGG-LEDAAAVDFVFGH---------GLIYWSDVSEEA-IKRTE 79
Query: 354 MDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 80 FNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL-- 137
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 ---------DQPRAIALDPSSGFMYWTDWG 158
>gi|47123899|gb|AAH70552.1| VLDLR protein [Xenopus laevis]
Length = 869
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/398 (29%), Positives = 182/398 (45%), Gaps = 74/398 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ KVC+ DC + +DE C++ EC G CS+ CH P+G C C G L
Sbjct: 329 ECIESNKVCNKHKDCKDWSDEPVKDCEVDECLENNGGCSHICHDLPIGYECECTAGFKLI 388
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ P CSQ+C N KG Y C C++GY ++ CKA+ LI +N
Sbjct: 389 -DRKTCGDIDECQNPEICSQICVNLKGGYKCECSKGYQMDPSTGVCKAVGREPC-LIFTN 446
Query: 123 RHSILVADLEEK---------------GKDHRAQDI--------------------VVSG 147
R I LE K D + Q + V S
Sbjct: 447 RRDIRKVGLERKEYIQLVEQLRNTVALDADIKEQSLFWADTIQKAIFRAPFDTREKVGSH 506
Query: 148 LDLVE------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+ +VE +A DWI +IYW+D+ L I V + +G+ R L + + +DP
Sbjct: 507 VKVVEDVHSPSAIAIDWIYKNIYWIDTILKTISVSNFDGSKRKTLFSSELQDLTSIAVDP 566
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++W+D GE +IE+ GM+G +R +I+ + P+G+ +D+ R+Y+ DSKL
Sbjct: 567 ISG--FIYWSDCGEPAKIEKAGMNGIDRQQLITADVQRPSGIAIDVVKSRLYWVDSKLHT 624
Query: 262 IDC------------KSLEIKTNVNYSTIFR-KLYWIDE------GGN---GVPLKIGKA 299
+ KS E + TIF ++YWID G N G L+
Sbjct: 625 LSSVDLNGQDRRVILKSHEFLAHPLALTIFEDRVYWIDGENEAIYGANKFSGQELETLVN 684
Query: 300 NMDGSNASILVSGQLYEALALD-----LENGMLYYSTL 332
N++ + I+V +L + L ++ +ENG Y L
Sbjct: 685 NLNDAQ-DIIVYHELIQPLGINWCNEQIENGGCKYLCL 721
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 17/131 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
I++ +YWID + I +N DGS L S +L + ++A+D +G +Y
Sbjct: 524 IYKNIYWIDT----ILKTISVSNFDGSKRKTLFSSELQDLTSIAVDPISGFIY------- 572
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
W+D GE +IE+ GM+G +R +I+ + P+G+ +D+ R+Y+ DSKL +
Sbjct: 573 ----WSDCGEPAKIEKAGMNGIDRQQLITADVQRPSGIAIDVVKSRLYWVDSKLHTLSSV 628
Query: 396 NYDGTGRQQVI 406
+ +G R+ ++
Sbjct: 629 DLNGQDRRVIL 639
>gi|148727288|ref|NP_002327.2| low-density lipoprotein receptor-related protein 6 precursor [Homo
sapiens]
gi|317373385|sp|O75581.2|LRP6_HUMAN RecName: Full=Low-density lipoprotein receptor-related protein 6;
Short=LRP-6; Flags: Precursor
gi|109658652|gb|AAI17137.1| Low density lipoprotein receptor-related protein 6 [Homo sapiens]
gi|116497061|gb|AAI26406.1| Low density lipoprotein receptor-related protein 6 [Homo sapiens]
Length = 1613
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 117/214 (54%), Gaps = 47/214 (21%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++
Sbjct: 139 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
L AL L +LY WTDW +
Sbjct: 223 SLPHPFALTLFEDILY-----------WTDWSTH 245
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 394 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 454 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKT 511
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 512 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 537
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 538 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREVII 569
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 395 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 472 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRSVGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AVVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPIALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSVGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAVVVNPEKGYMYFT 1074
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 27/152 (17%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIER 351
L++ A NA+I+V G L +A A+D +G++Y W+D E I+R
Sbjct: 31 LRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIY-----------WSDVSEEA-IKR 77
Query: 352 IGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 78 TEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL 137
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 -----------DQPRAIALDPSSGFMYWTDWG 158
>gi|417406635|gb|JAA49967.1| Putative low-density lipoprotein receptor-related protein 6 isoform
1 [Desmodus rotundus]
Length = 1613
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 115/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++
Sbjct: 139 QPRAIALDPSSG--FIYWTDWGEVPKIERAGMDGSSRFIIINTEIYWPNGLTLDYEERKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG++ +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTDRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 223 SLPHPFALTLFEDTLY-----------WTDW 242
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 141/329 (42%), Gaps = 93/329 (28%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI--------- 126
G CS +C + K Y C+C G L D TCK + + L+++ R +
Sbjct: 291 GGCSHLCLMSPVKPFYQCACPTGVKLLEDGKTCK--DGATELLLLARRTDLRRISLDTPD 348
Query: 127 ---LVADLEE------------------KGKDHRA-----------QDIVVSGLDLVEGL 154
+V LE+ + RA Q +V + + +G+
Sbjct: 349 FTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFLDGTGSQFVVTAQIAHPDGI 408
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++LDP G +++WTDWG
Sbjct: 409 AVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVG--YMYWTDWG 466
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
E P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K D
Sbjct: 467 EIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTD-------------- 512
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
KI N DG+ +LV ++ L +Y
Sbjct: 513 --------------------KIEVMNTDGTGRRVLVEDKIPHIFGFTLLGDYVY------ 546
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ + R II
Sbjct: 547 -----WTDW-QRRSIERVHKRSAEREIII 569
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFIY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFIIINTEIYWPNGLTLDYEERKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTDRQAVVKGSLPHPFALTLFED 235
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 111/237 (46%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIE +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEASKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDG+ R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGTERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEASKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDG+ R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGTERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G Y+C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGYVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPNQNLEIQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRSIGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPVALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGTERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QAGWNECASSNGHCSHLCLAVPVGGYVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSVPNQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSIGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 23/150 (15%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
L++ A NA+I+V G L +A A+D G ++W+D E I+R
Sbjct: 31 LRLVDATNGKENATIVVGG-LEDAAAVDFVFGH---------GLIYWSDVSEEA-IKRTE 79
Query: 354 MDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 80 FNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL-- 137
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 ---------DQPRAIALDPSSGFIYWTDWG 158
>gi|114643605|ref|XP_001152103.1| PREDICTED: low-density lipoprotein receptor-related protein 6
isoform 1 [Pan troglodytes]
gi|410214672|gb|JAA04555.1| low density lipoprotein receptor-related protein 6 [Pan
troglodytes]
gi|410265916|gb|JAA20924.1| low density lipoprotein receptor-related protein 6 [Pan
troglodytes]
gi|410289814|gb|JAA23507.1| low density lipoprotein receptor-related protein 6 [Pan
troglodytes]
gi|410332123|gb|JAA35008.1| low density lipoprotein receptor-related protein 6 [Pan
troglodytes]
Length = 1613
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 117/214 (54%), Gaps = 47/214 (21%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++
Sbjct: 139 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
L AL L +LY WTDW +
Sbjct: 223 SLPHPFALTLFEDILY-----------WTDWSTH 245
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 394 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 454 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKT 511
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 512 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 537
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 538 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREVII 569
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 395 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 472 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIY--SRYVYWTCEATN-VINVTRLDGRSVGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPIALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R VY+ + I+ DG V
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIYSRYVYWTCEATNVINVTRLDGRSVGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 27/152 (17%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIER 351
L++ A NA+I+V G L +A A+D +G++Y W+D E I+R
Sbjct: 31 LRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIY-----------WSDVSEEA-IKR 77
Query: 352 IGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 78 TEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL 137
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 -----------DQPRAIALDPSSGFMYWTDWG 158
>gi|3462527|gb|AAC33006.1| LDL receptor-related protein 6 [Homo sapiens]
gi|119616659|gb|EAW96253.1| low density lipoprotein receptor-related protein 6 [Homo sapiens]
Length = 1613
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 117/214 (54%), Gaps = 47/214 (21%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++
Sbjct: 139 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
L AL L +LY WTDW +
Sbjct: 223 SLPHPFALTLFEDILY-----------WTDWSTH 245
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 394 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 454 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKT 511
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 512 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 537
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 538 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREVII 569
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 395 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 472 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRSVGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPIALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSVGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 27/152 (17%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIER 351
L++ A NA+I+V G L +A A+D +G++Y W+D E I+R
Sbjct: 31 LRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIY-----------WSDVSEEA-IKR 77
Query: 352 IGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 78 TEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL 137
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 -----------DQPRAIALDPSSGFMYWTDWG 158
>gi|426371723|ref|XP_004052791.1| PREDICTED: low-density lipoprotein receptor-related protein 6
isoform 2 [Gorilla gorilla gorilla]
Length = 1568
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 116/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++
Sbjct: 139 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L +LY WTDW
Sbjct: 223 SLPHPFALTLFEDILY-----------WTDW 242
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 394 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 454 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKT 511
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 512 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 537
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 538 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREVII 569
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 395 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 472 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 144/342 (42%), Gaps = 66/342 (19%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRSVGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPIALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403
+ + I P GLT + +Y+ D + I+ D TGR+
Sbjct: 1139 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGRE 1176
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 98 GYVL--EYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVV-SGLDLVEGL 154
G VL E D +N ++ +N +E D ++++ SGL L
Sbjct: 1049 GVVLKGEQDRPRAIVVNPEKGYMYFTNLQE-RSPKIERAALDGTEREVLFFSGLSKPIAL 1107
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A D G ++W DS L RIE D +G NRIVL NI QP G+ + WL+W D
Sbjct: 1108 ALDSRLGKLFWADSDLRRIESSDLSGANRIVLEDSNILQPVGLTV----FENWLYWID-K 1162
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IE+I M G T + +I +G+
Sbjct: 1163 QQQMIEKIDMTGREGRTKVQARIAQLSGI 1191
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSVGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 27/152 (17%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIER 351
L++ A NA+I+V G L +A A+D +G++Y W+D E I+R
Sbjct: 31 LRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIY-----------WSDVSEEA-IKR 77
Query: 352 IGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 78 TEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL 137
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 -----------DQPRAIALDPSSGFMYWTDWG 158
>gi|402885217|ref|XP_003906061.1| PREDICTED: low-density lipoprotein receptor-related protein 6
isoform 2 [Papio anubis]
Length = 1568
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 116/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++
Sbjct: 139 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L +LY WTDW
Sbjct: 223 SLPHPFALTLFEDILY-----------WTDW 242
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 394 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 454 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKT 511
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 512 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 537
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 538 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREVII 569
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 395 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 472 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRSIGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPIALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSIGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 23/150 (15%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
L++ A NA+I+V G L +A A+D G ++W+D E I+R
Sbjct: 31 LRLVDATNGKENATIVVGG-LEDAAAVDFVFGH---------GLIYWSDVSEEA-IKRTE 79
Query: 354 MDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 80 FNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL-- 137
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 ---------DQPRAIALDPSSGFMYWTDWG 158
>gi|397512542|ref|XP_003826600.1| PREDICTED: low-density lipoprotein receptor-related protein 6
isoform 2 [Pan paniscus]
Length = 1568
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 116/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++
Sbjct: 139 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L +LY WTDW
Sbjct: 223 SLPHPFALTLFEDILY-----------WTDW 242
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 394 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 454 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKT 511
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 512 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 537
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 538 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREVII 569
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 395 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 472 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRSVGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPIALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSVGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 27/152 (17%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIER 351
L++ A NA+I+V G L +A A+D +G++Y W+D E I+R
Sbjct: 31 LRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIY-----------WSDVSEEA-IKR 77
Query: 352 IGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 78 TEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL 137
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 -----------DQPRAIALDPSSGFMYWTDWG 158
>gi|332838599|ref|XP_003313547.1| PREDICTED: low-density lipoprotein receptor-related protein 6 [Pan
troglodytes]
Length = 1568
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 116/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++
Sbjct: 139 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L +LY WTDW
Sbjct: 223 SLPHPFALTLFEDILY-----------WTDW 242
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 394 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 454 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKT 511
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 512 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 537
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 538 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREVII 569
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 395 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 472 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIY--SRYVYWTCEATN-VINVTRLDGRSVGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPIALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R VY+ + I+ DG V
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIYSRYVYWTCEATNVINVTRLDGRSVGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 27/152 (17%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIER 351
L++ A NA+I+V G L +A A+D +G++Y W+D E I+R
Sbjct: 31 LRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIY-----------WSDVSEEA-IKR 77
Query: 352 IGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 78 TEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL 137
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 -----------DQPRAIALDPSSGFMYWTDWG 158
>gi|219521233|gb|AAI43726.1| LRP6 protein [Homo sapiens]
Length = 1568
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 116/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++
Sbjct: 139 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L +LY WTDW
Sbjct: 223 SLPHPFALTLFEDILY-----------WTDW 242
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 394 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 454 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKT 511
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 512 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 537
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 538 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREVII 569
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 395 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 472 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRSVGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPIALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSVGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 27/152 (17%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIER 351
L++ A NA+I+V G L +A A+D +G++Y W+D E I+R
Sbjct: 31 LRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIY-----------WSDVSEEA-IKR 77
Query: 352 IGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 78 TEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL 137
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 -----------DQPRAIALDPSSGFMYWTDWG 158
>gi|149412874|ref|XP_001507735.1| PREDICTED: very low-density lipoprotein receptor-like
[Ornithorhynchus anatinus]
Length = 650
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 167/396 (42%), Gaps = 96/396 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGP-GCDLAECKH---KFGLCSNTCHPTPLGA-------- 51
+CV CDG DC +G+DE P C + C+ G S C P
Sbjct: 75 QCVPNRWQCDGDPDCEDGSDESPEQCHMRTCRINEISCGAGSTQCIPVSWKCDGESDCDS 134
Query: 52 ---------------------LCTCPPG-EILSNDSVTCQDMNECEQPGYCSQMCTNTKG 89
C C G E++ D TC D++EC+ PG CSQ+C N KG
Sbjct: 135 EEDEENCXXXXXXXXXVVDSYECDCAAGFELI--DRKTCGDIDECQNPGICSQICINLKG 192
Query: 90 SYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK--------------- 134
Y C C+ GY ++ CKAI + LI +NR I LE K
Sbjct: 193 GYKCECSRGYQMDLATGVCKAIGKEPS-LIFTNRRDIRKIGLERKEYIQLVEQLRNTVAL 251
Query: 135 GKDHRAQDIV-----------------------VSGLDLV---EGLAYDWIGGHIYWLDS 168
D AQ + V +D V +A DWI +IYW D
Sbjct: 252 DADIAAQKLFWADLSQKAIFSASIDARDKVGRHVKMIDSVYNPAAIAVDWIYKNIYWTDV 311
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I V +GT R +L ++ +P + +DP G + +W+DWGE +IE+ GM+G +
Sbjct: 312 ASKTISVASLDGTKRKILFNSDLREPTSIAVDPLSG--FAYWSDWGEPAKIEKAGMNGFD 369
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC------------KSLEIKTNVNYS 276
R +++T I WPNG+TLD+ R+Y+ DSKL + KSLE +
Sbjct: 370 RRQLVTTDIQWPNGITLDLVKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLAV 429
Query: 277 TIFR-KLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
TIF ++YWID V G GS + LV+
Sbjct: 430 TIFEDRVYWIDGENEAV---YGANKFTGSELATLVN 462
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 34/206 (16%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST- 277
I +IG++ ++ ++ L DIA +++++AD I S++ + V
Sbjct: 228 IRKIGLERKEYIQLVE-QLRNTVALDADIAAQKLFWADLSQKAIFSASIDARDKVGRHVK 286
Query: 278 ---------------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALAL 320
I++ +YW D + + A++DG+ IL + L E ++A+
Sbjct: 287 MIDSVYNPAAIAVDWIYKNIYWTDVASKTISV----ASLDGTKRKILFNSDLREPTSIAV 342
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
D +G Y W+DWGE +IE+ GM+G +R +++T I WPNG+TLD+
Sbjct: 343 DPLSGFAY-----------WSDWGEPAKIEKAGMNGFDRRQLVTTDIQWPNGITLDLVKS 391
Query: 381 RVYFADSKLDFIDFCNYDGTGRQQVI 406
R+Y+ DSKL + + +G R+ V+
Sbjct: 392 RLYWLDSKLHMLSSVDLNGQDRRIVL 417
>gi|347447636|pdb|3SOB|B Chain B, The Structure Of The First Ywtd Beta Propeller Domain Of
Lrp6 In Complex With A Fab
Length = 316
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 116/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 60 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 119
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++
Sbjct: 120 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKL 177
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 178 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 203
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L +LY WTDW
Sbjct: 204 SLPHPFALTLFEDILY-----------WTDW 223
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 86/144 (59%), Gaps = 17/144 (11%)
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRW 337
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 88 EKLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY--------- 134
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++Y+AD+KL+FI N
Sbjct: 135 --WTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNL 192
Query: 398 DGTGRQQVILIDLMVEFTNDLMGD 421
DGT RQ V+ L F L D
Sbjct: 193 DGTNRQAVVKGSLPHPFALTLFED 216
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 27/152 (17%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIER 351
L++ A NA+I+V G L +A A+D +G++Y W+D E I+R
Sbjct: 12 LRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIY-----------WSDVSEEA-IKR 58
Query: 352 IGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 59 TEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL 118
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 119 -----------DQPRAIALDPSSGFMYWTDWG 139
>gi|347447638|pdb|3SOQ|A Chain A, The Structure Of The First Ywtd Beta Propeller Domain Of
Lrp6 In Complex With A Dkk1 Peptide
gi|347447640|pdb|3SOV|A Chain A, The Structure Of A Beta Propeller Domain In Complex With
Peptide S
Length = 318
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 116/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 63 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 122
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++
Sbjct: 123 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKL 180
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 181 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 206
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L +LY WTDW
Sbjct: 207 SLPHPFALTLFEDILY-----------WTDW 226
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 86/144 (59%), Gaps = 17/144 (11%)
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRW 337
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 91 EKLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY--------- 137
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++Y+AD+KL+FI N
Sbjct: 138 --WTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNL 195
Query: 398 DGTGRQQVILIDLMVEFTNDLMGD 421
DGT RQ V+ L F L D
Sbjct: 196 DGTNRQAVVKGSLPHPFALTLFED 219
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 27/152 (17%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIER 351
L++ A NA+I+V G L +A A+D +G++Y W+D E I+R
Sbjct: 15 LRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIY-----------WSDVSEEA-IKR 61
Query: 352 IGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 62 TEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL 121
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 122 -----------DQPRAIALDPSSGFMYWTDWG 142
>gi|350593219|ref|XP_003359470.2| PREDICTED: low-density lipoprotein receptor-related protein 1B,
partial [Sus scrofa]
Length = 597
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 151/312 (48%), Gaps = 55/312 (17%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCD--LAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
++CV+L+++C+G DC +G DEG C L C+H C C +C C G
Sbjct: 89 NKCVHLSQMCNGVLDCSDGYDEGVHCRELLPSCQHLN--CQYKCAIVRNSTICYCEDGFE 146
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AF 117
+ D +C+D +EC G CSQ C NT GSY CSC EGY+++ DN +C+A N
Sbjct: 147 IKEDKRSCKDQDECAIYGTCSQTCINTYGSYACSCVEGYLMQPDNRSCRAKNEPTDRPPM 206
Query: 118 LIISNRHSI-------------------------------LVADLEEKGKDHRAQDI--- 143
L+I+N +I ++ +E + ++ + I
Sbjct: 207 LLIANSETIEVFYLNGSKMATLSSVNGNEIYTLDFIYNEDMICWIESRESSNQLKCIQIT 266
Query: 144 ------------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI 191
++ V+ +A DW+ ++Y++D +RI VCD NG+ + L +
Sbjct: 267 KTGRLTDEWTINILQSFHNVQQMAIDWLTRNLYFVDHVSDRIFVCDYNGSVCVTLIDLEL 326
Query: 192 TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
P+ + +DP G LF+TD+G ++ER MDG NR+ II +K P L LD+ +
Sbjct: 327 QNPKAIAVDPIAGK--LFFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNKW 384
Query: 252 VYFADSKLDFID 263
VY+ D LD+++
Sbjct: 385 VYWVDLYLDYVE 396
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 17/129 (13%)
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTRW 337
R LY++D V +I + +GS L+ +L +A+A+D G L
Sbjct: 296 RNLYFVDH----VSDRIFVCDYNGSVCVTLIDLELQNPKAIAVDPIAGKL---------- 341
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
F+TD+G ++ER MDG NR+ II +K P L LD+ + VY+ D LD+++ +Y
Sbjct: 342 -FFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNKWVYWVDLYLDYVEVVDY 400
Query: 398 DGTGRQQVI 406
G R +I
Sbjct: 401 QGKNRHTII 409
>gi|185135214|ref|NP_001117847.1| vitellogenin receptor precursor [Oncorhynchus mykiss]
gi|16610195|emb|CAD10640.1| vitellogenin receptor [Oncorhynchus mykiss]
Length = 847
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 149/340 (43%), Gaps = 86/340 (25%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG--------------------------- 27
C++ ++ C+G DC +G DE GP
Sbjct: 285 CIHGSRQCNGLRDCADGTDEVNCKNLTQCNGPDKFKCRSGECIEMSKVCNKARDCPDWSD 344
Query: 28 -----CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQ 82
C+L EC G CS+ C +G C C PG L D TC D+NEC PG CSQ
Sbjct: 345 EPINECNLNECLLNNGGCSHICRDMVIGFECDCTPGLQLI-DRKTCGDINECMNPGICSQ 403
Query: 83 MCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK-------- 134
+C N KG Y C C+ Y ++ CKA+ LI +NR I LE +
Sbjct: 404 ICINLKGGYKCECHNSYQMDPTTGVCKAVGKEPC-LIFTNRRDIRKLGLERREYTQIVEQ 462
Query: 135 -------GKDHRAQDI--------------------VVSGLDLVE-----GLAYDWIGGH 162
D Q I V S + +++ G+A DWI +
Sbjct: 463 LRNTVALDADFTQQRIFWADLSQRAIFSTVLDKRGDVGSHVKVIDNVTPVGIAVDWIYNN 522
Query: 163 IYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI 222
IYW D IEV + NGT R VL + +P + +DP G +L+W+DWGE IE+
Sbjct: 523 IYWSDLGTKTIEVANFNGTKRKVLFSSGLKEPASIAVDPLSG--FLYWSDWGEPATIEKS 580
Query: 223 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
GM+G +R ++ T I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 581 GMNGVDRQVLVQTDIQWPNGITLDLIKSRLYWVDSKLHML 620
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 169/399 (42%), Gaps = 70/399 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ ++KVC+ DCP+ +DE C+L EC G CS+ C +G C C PG L
Sbjct: 325 ECIEMSKVCNKARDCPDWSDEPINECNLNECLLNNGGCSHICRDMVIGFECDCTPGLQLI 384
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D+NEC PG CSQ+C N KG Y C C+ Y ++ CKA+ LI +N
Sbjct: 385 -DRKTCGDINECMNPGICSQICINLKGGYKCECHNSYQMDPTTGVCKAVGKEPC-LIFTN 442
Query: 123 RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI--EVCDENG 180
R D+ + G + R +V L L D+ I+W D I V D+ G
Sbjct: 443 RR-----DIRKLGLERREYTQIVEQLRNTVALDADFTQQRIFWADLSQRAIFSTVLDKRG 497
Query: 181 -TNRIVLAKDNITQPRGMMLDPSPGTRWLF----WTDWGENPRIERIGMDGSNRSTIIST 235
V DN+T P G+ +D W++ W+D G IE +G+ R + S+
Sbjct: 498 DVGSHVKVIDNVT-PVGIAVD------WIYNNIYWSDLGTK-TIEVANFNGTKRKVLFSS 549
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
+ P + +D + +Y++D W G P
Sbjct: 550 GLKEPASIAVDPLSGFLYWSD---------------------------W------GEPAT 576
Query: 296 IGKANMDGSNASILVSG--QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
I K+ M+G + +LV Q + LDL LY W D + + +
Sbjct: 577 IEKSGMNGVDRQVLVQTDIQWPNGITLDLIKSRLY-----------WVD-SKLHMLCSVD 624
Query: 354 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
++G NR ++ + Y + L + RV++ D + + I
Sbjct: 625 LNGDNRRKVLQSPDYLAHPFALTVFEDRVFWTDGENEAI 663
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 33/205 (16%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST- 277
I ++G++ + I+ ++ L D +R+++AD I L+ + +V
Sbjct: 446 IRKLGLERREYTQIVE-QLRNTVALDADFTQQRIFWADLSQRAIFSTVLDKRGDVGSHVK 504
Query: 278 --------------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALD 321
I+ +YW D G + + AN +G+ +L S L E ++A+D
Sbjct: 505 VIDNVTPVGIAVDWIYNNIYWSDLGTKTIEV----ANFNGTKRKVLFSSGLKEPASIAVD 560
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 381
+G LY W+DWGE IE+ GM+G +R ++ T I WPNG+TLD+ R
Sbjct: 561 PLSGFLY-----------WSDWGEPATIEKSGMNGVDRQVLVQTDIQWPNGITLDLIKSR 609
Query: 382 VYFADSKLDFIDFCNYDGTGRQQVI 406
+Y+ DSKL + + +G R++V+
Sbjct: 610 LYWVDSKLHMLCSVDLNGDNRRKVL 634
>gi|358410952|ref|XP_003581886.1| PREDICTED: low-density lipoprotein receptor-related protein 1B [Bos
taurus]
Length = 2204
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 142/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +CD K DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 507 RCIPSGALCDNKDDCGDGSDER-NCHINECLSKKVSGCSQDCQDLPVSYKCKCWPGFQLK 565
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C +GY ++ N + CK+++ FLI++
Sbjct: 566 DDGKTCVDIDECSLGFPCSQQCINTYGTYKCLCTDGYEIQPANPNGCKSLSDEEPFLILA 625
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
+ H I L ++G D+R + I
Sbjct: 626 DHHEIRKISTDGSNYTLLKQGLNNVIGIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDI 685
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG +L + PR + LDP
Sbjct: 686 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTILVSKRLKFPRDLSLDPR 745
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +L+W D E P I R+GMDG+N+S +I TKI P LT+D R+Y+AD
Sbjct: 746 AG--YLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLYWAD 797
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 138/328 (42%), Gaps = 74/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSNT--CHPTPLGALCTCPP 57
+C+ + CD DC +G+DE GC + C+ C + C+ C C P
Sbjct: 1378 KCIPVDLQCDQLDDCGDGSDE-QGCRITPSEYTCEDNVNPCGDDAYCNQIKTSVFCRCKP 1436
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G + + C+D+NEC G CS C NT+GSY C C++ + + N+TC A
Sbjct: 1437 GFQRNMKNRQCEDLNECLVFGTCSHQCINTEGSYKCVCHQNF--QERNNTCIAKGSEDQV 1494
Query: 118 LIISNRHSIL--------------VADLEEKGK-----DHRAQDIVV------------- 145
L I+N IL ++ +E + + +D+++
Sbjct: 1495 LYIANDTDILGFIYPFNYSGDHQQISHIEHNSRITGMDVYYQRDMIIWSTQFNPGGIFYK 1554
Query: 146 -----------SGLDLVE-----GLAYDWIGGHIYWLD-SRLN--------------RIE 174
SGL E +A DW+ G+IYW D SR++ I
Sbjct: 1555 RIPGREKRQANSGLICPEFRRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSIN 1614
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V +G N L + +P + ++P G ++WT G++ IE MDG+ R ++
Sbjct: 1615 VGQLSGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVVGDHSHIEEAAMDGTLRRILVQ 1672
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D + R+Y+AD +L I
Sbjct: 1673 KNLQRPTGLAVDHFSERIYWADLELSVI 1700
>gi|363728220|ref|XP_417286.3| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 6 [Gallus gallus]
Length = 1625
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 115/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++V+SGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 92 EFNKSGSVQNVVISGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 151
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDP+ G +++WTDWGE P+IER GMDGS+RS I++T IYWPNGLTLD +++
Sbjct: 152 QPRAIALDPARG--FMYWTDWGEVPKIERAGMDGSSRSIIVNTDIYWPNGLTLDYEEQKL 209
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DGS+ +V G
Sbjct: 210 YWADAKLNFIH----------------------------------KSNLDGSHRQAVVKG 235
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 236 SLPHPFALTLFGDTLY-----------WTDW 255
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 143/329 (43%), Gaps = 93/329 (28%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR------------ 123
G CS +C + TK SY C+C G L + TCK + + L+++ R
Sbjct: 304 GGCSHLCLMSPTKPSYQCACPTGVKLLENGKTCK--DGATELLLLARRTDLRRISLDTPD 361
Query: 124 ------------HSILV-----------ADLEEKGKDHR------AQDIVVSGLDLVEGL 154
H+I + D E + +Q +V + + +G+
Sbjct: 362 FTDIVLPLEDIRHAIAIDFDPLEGYIYWTDDEVRAIRRSFVDGSGSQFVVTAQIAHPDGI 421
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++LDP G +++WTDWG
Sbjct: 422 AVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVG--YMYWTDWG 479
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
E P+IER +DGS+R +++T + WPNGL LD A ++Y+ D+K D
Sbjct: 480 EIPKIERAALDGSDRIVLVNTSLGWPNGLALDYAESKIYWGDAKTD-------------- 525
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
KI N DG+ +LV +L L +Y
Sbjct: 526 --------------------KIEVMNADGTGRRVLVEDKLPHIFGFTLLGDYVY------ 559
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ + R II
Sbjct: 560 -----WTDW-QRRSIERVHKRTAEREIII 582
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD G +Y
Sbjct: 121 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPARGFMY---------- 166
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+RS I++T IYWPNGLTLD +++Y+AD+KL+FI N D
Sbjct: 167 -WTDWGEVPKIERAGMDGSSRSIIVNTDIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 225
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
G+ RQ V+ L F L GD
Sbjct: 226 GSHRQAVVKGSLPHPFALTLFGD 248
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 116/245 (47%), Gaps = 26/245 (10%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYI 92
C G CS+ C P G C CP G L ND M C P I
Sbjct: 605 CAEDNGGCSHLCLYRPQGLRCACPIGLELIND------MKTCIVPEAFLLFSRRADIRRI 658
Query: 93 CSCNEGYVLEYDNHTCK----AINHSAAFLIISNRHSILVADLEEKGKDHR------AQD 142
LE +N+ + ++A +R S D+ K +
Sbjct: 659 S-------LETNNNNVAIPLTGVKEASALDFXCDRQSNYWTDISLKTISRAFMNGSALEH 711
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V GLD EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+
Sbjct: 712 VVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPA 771
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I
Sbjct: 772 EG--FMYWTEWGGKPKIDRASMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLI 828
Query: 263 DCKSL 267
+ ++
Sbjct: 829 ESSNM 833
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 126/310 (40%), Gaps = 78/310 (25%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S +++I
Sbjct: 904 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNSDNRTCSA---PTTFLLFSQKNAINRM 960
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI--- 184
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 961 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNIIRKAQEDGSQSLTVV 1016
Query: 185 ----------------------------------------------VLAKDNITQPRGMM 198
V+ K + +PR ++
Sbjct: 1017 ISPVPNQNLDMQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRPMGVVLKGDQDRPRAIV 1076
Query: 199 LDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++P G ++++T+ E +P+IER +DG+ R + + + P L +D ++++ADS
Sbjct: 1077 VNPEKG--YMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALAIDSQLGKLFWADS 1134
Query: 258 KLDFIDCKSLEIKTNVNYS----------TIFRK-LYWIDEGGNGVPLKIGKANMDGSNA 306
L I+ L V T+F LYWID I K +M G
Sbjct: 1135 DLRRIESSDLSGANRVVLEDSNILQPVGLTVFENWLYWIDRQQQ----MIEKIDMTGREG 1190
Query: 307 SILVSGQLYE 316
V ++ +
Sbjct: 1191 RTKVQARIAQ 1200
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 126/346 (36%), Gaps = 102/346 (29%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E G CS +C C+C G L D TC AFL+ S R I
Sbjct: 603 NPCAEDNGGCSHLCLYRPQGLRCACPIGLELINDMKTCIV---PEAFLLFSRRADIRRIS 659
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
LE + + + + E A D+ CD
Sbjct: 660 LETNNNN-----VAIPLTGVKEASALDF----------------XCDRQSN--------- 689
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+WTD I R M+GS ++ + +P G+ +D
Sbjct: 690 ------------------YWTDISLK-TISRAFMNGSALEHVVEFGLDYPEGMAVDW--- 727
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
+ + LYW D G N +I + +DG + +LV
Sbjct: 728 ---------------------------LGKNLYWADTGTN----RIEVSKLDGQHRQVLV 756
Query: 311 SGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY 368
L ALALD G +Y WT+WG P+I+R MDGS R+T++ +
Sbjct: 757 WKDLDSPRALALDPAEGFMY-----------WTEWGGKPKIDRASMDGSERTTLVP-NVG 804
Query: 369 WPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
NGLT+D A RR+Y+ D + I+ N G R ++I DL F
Sbjct: 805 RANGLTIDYAKRRLYWTDLDTNLIESSNMLGLDR-EIIADDLPHPF 849
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 128/334 (38%), Gaps = 79/334 (23%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V + L GLA D+ IYW D++ ++IEV + +GT R VL +D + G L
Sbjct: 497 LVNTSLGWPNGLALDYAESKIYWGDAKTDKIEVMNADGTGRRVLVEDKLPHIFGFTL--- 553
Query: 203 PGTRWLFWTDWGENPRIERI------------------GMDGSNRSTIISTK-------- 236
+++WTDW + IER+ G+ +N II T
Sbjct: 554 -LGDYVYWTDW-QRRSIERVHKRTAEREIIIDQLPDLMGLKATNVHQIIGTNPCAEDNGG 611
Query: 237 -----IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+Y P GL D K + L + I
Sbjct: 612 CSHLCLYRPQGLRCACPIGLELINDMKTCIVPEAFLLFSRRADIRRI------------- 658
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWL-FWTDWGENPRIE 350
+ +N +I ++G + EA ALD C R +WTD I
Sbjct: 659 ------SLETNNNNVAIPLTG-VKEASALDF----------XCDRQSNYWTDISLK-TIS 700
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
R M+GS ++ + +P G+ +D + +Y+AD+ + I+ DG RQ ++ DL
Sbjct: 701 RAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDL 760
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEGAE 444
+ ALALD G +Y++ G +
Sbjct: 761 -----------DSPRALALDPAEGFMYWTEWGGK 783
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 129/299 (43%), Gaps = 29/299 (9%)
Query: 128 VADLEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL 186
V +E G D ++ I+V + + GL D+ +YW D++LN I + +G++R +
Sbjct: 173 VPKIERAGMDGSSRSIIVNTDIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGSHRQAV 232
Query: 187 AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 246
K ++ P + L L+WTDW + + G + I S I+ P +
Sbjct: 233 VKGSLPHPFALTLFGDT----LYWTDWNTHSILACSKYSGEDLREIHS-NIFSPMDIHAF 287
Query: 247 IATRRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP-LKIGKANMDGS 304
R+ + ++ C L + + S + GV L+ GK DG+
Sbjct: 288 SQKRQPNATNPCGINNGGCSHLCLMSPTKPS-------YQCACPTGVKLLENGKTCKDGA 340
Query: 305 NASILVSGQL-YEALALDLENGMLYYSTLKCTR------------WLFWTDWGENPRIER 351
+L++ + ++LD + L+ R +++WTD E I R
Sbjct: 341 TELLLLARRTDLRRISLDTPDFTDIVLPLEDIRHAIAIDFDPLEGYIYWTD-DEVRAIRR 399
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+DGS +++ +I P+G+ +D R +Y+ D+ D I+ +GT R+ +I DL
Sbjct: 400 SFVDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDL 458
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 23/150 (15%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP-RIERI 352
L++ A NA+++V G L +A A+D ++ L ++W+D E +
Sbjct: 44 LRLVDAANGKENATVIVGG-LEDAAAVDF----VFVKGL-----IYWSDVSEEAIKRTEF 93
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
GS ++ +IS + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 94 NKSGSVQNVVIS-GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL-- 150
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD G +Y++ G
Sbjct: 151 ---------DQPRAIALDPARGFMYWTDWG 171
>gi|126344473|ref|XP_001374330.1| PREDICTED: low-density lipoprotein receptor-related protein 5,
partial [Monodelphis domestica]
Length = 649
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 122/245 (49%), Gaps = 48/245 (19%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
Q ++VSGL +GLA DW+G +YW DS NRIEV NGT+R VL ++ QPR + L
Sbjct: 93 VQSVIVSGLVSPDGLACDWVGKKLYWTDSETNRIEVASLNGTSRKVLFWQDLDQPRAIAL 152
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP+ G +++WTDWGE PRIER GMD S R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 153 DPAHG--YMYWTDWGETPRIERAGMDSSVRKIIVDSDIYWPNGLTIDLEEQKLYWADAKL 210
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
FI +AN+DGS +V G L A
Sbjct: 211 SFIH----------------------------------RANLDGSFRQKVVEGSLTHPFA 236
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L L LY WTDW + G R I+ +Y P + +
Sbjct: 237 LTLSGDTLY-----------WTDWQTHSIHACNKRTGEKRREILGA-LYSPMDIQVLSQD 284
Query: 380 RRVYF 384
R+ YF
Sbjct: 285 RQPYF 289
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 152/356 (42%), Gaps = 89/356 (25%)
Query: 49 LGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNH 106
LGAL + ++LS D E G CS +C + + Y C+C G LE D
Sbjct: 269 LGALYSPMDIQVLSQDRQPYFHTPCEEDNGGCSHLCLLSPREPFYACACPTGVQLEDDGK 328
Query: 107 TCKAINHSAAFL----------------------IISNRHSILV-----------ADLEE 133
TCKA L + RH+I + D E
Sbjct: 329 TCKAGAEEVLLLARRTDLRRISLDMPDFTDIILQVDDIRHAIAIDYDPVERYVYWTDDEV 388
Query: 134 KGKDHR------AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
+ AQ +V + ++ +G+A DW+ ++YW D+ NRIEV NGT+R +L
Sbjct: 389 RAIRRAYLDGSGAQTLVSTEINDPDGIAVDWVARNLYWTDTGTNRIEVTRLNGTSRKILI 448
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+N+ +PR ++L+P+ G +++WTDWGE+P+IE +DG R +++T + WPNGL LD+
Sbjct: 449 SENLDEPRAIVLNPAMG--YMYWTDWGESPKIECAHLDGQARRVLVNTSLGWPNGLALDL 506
Query: 248 ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307
++Y+ D+K D KI N+DG+
Sbjct: 507 QEGKLYWGDAKTD----------------------------------KIEVINIDGTKRR 532
Query: 308 ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L+ +L L +Y WTDW + IER+ +NR II
Sbjct: 533 TLLEDKLPHIFGFTLLGDYIY-----------WTDW-QRRSIERVHKVKANRDIII 576
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 86/147 (58%), Gaps = 17/147 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I A+++G++ +L L + A+ALD +G +Y
Sbjct: 112 VGKKLYWTDSETN----RIEVASLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 160
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMD S R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 161 ----WTDWGETPRIERAGMDSSVRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 216
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGDN 422
N DG+ RQ+V+ L F L GD
Sbjct: 217 NLDGSFRQKVVEGSLTHPFALTLSGDT 243
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 153/375 (40%), Gaps = 98/375 (26%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 170 IERAGMDSSVRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 229
Query: 190 NITQPRGMMLDPSPGTRWLFWTDW------------GENPR-----------IERIGMD- 225
++T P + L L+WTDW GE R I+ + D
Sbjct: 230 SLTHPFALTLSGDT----LYWTDWQTHSIHACNKRTGEKRREILGALYSPMDIQVLSQDR 285
Query: 226 -------------GSNRSTIISTKIYW-----PNGLTLD--------------IATRRVY 253
G + ++S + + P G+ L+ + RR
Sbjct: 286 QPYFHTPCEEDNGGCSHLCLLSPREPFYACACPTGVQLEDDGKTCKAGAEEVLLLARRTD 345
Query: 254 FADSKLDFIDCKSLEIKTN-------VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
LD D + ++ + ++Y + R +YW D+ I +A +DGS A
Sbjct: 346 LRRISLDMPDFTDIILQVDDIRHAIAIDYDPVERYVYWTDDEVRA----IRRAYLDGSGA 401
Query: 307 SILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
LVS ++ + +A+D R L+WTD G N RIE ++G++R +IS
Sbjct: 402 QTLVSTEINDPDGIAVDW-----------VARNLYWTDTGTN-RIEVTRLNGTSRKILIS 449
Query: 365 TKIYWPNGLTLDIATRRVYFAD-SKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNG 423
+ P + L+ A +Y+ D + I+ + DG R+ +L++ + + N
Sbjct: 450 ENLDEPRAIVLNPAMGYMYWTDWGESPKIECAHLDGQARR--VLVNTSLGWPN------- 500
Query: 424 VPALALDLENGMLYY 438
LALDL+ G LY+
Sbjct: 501 --GLALDLQEGKLYW 513
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 26/141 (18%)
Query: 305 NASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRST 361
++I+VSG L +A A+D + G++Y WTD E + + G +
Sbjct: 48 ESTIVVSG-LEDAAAVDFQYSQGVIY-----------WTDVSEEAIKQTLFNQSGGAVQS 95
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+I + + P+GL D +++Y+ DS+ + I+ + +GT R+ V F DL
Sbjct: 96 VIVSGLVSPDGLACDWVGKKLYWTDSETNRIEVASLNGTSRK--------VLFWQDL--- 144
Query: 422 NGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 145 DQPRAIALDPAHGYMYWTDWG 165
>gi|126340141|ref|XP_001371673.1| PREDICTED: low-density lipoprotein receptor-related protein 6
[Monodelphis domestica]
Length = 1653
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 113/211 (53%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +GT R VL +
Sbjct: 119 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGTLRKVLFWQELD 178
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDP+ G +++WTDWGE P+IER GMDGS+R II+T IYWPNGLTLD ++
Sbjct: 179 QPRAIALDPANG--FMYWTDWGEVPKIERAGMDGSSRYIIINTDIYWPNGLTLDYEEEKL 236
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 237 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVRG 262
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 263 SLPHPFALTLFEDTLY-----------WTDW 282
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 434 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 493
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 494 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEDKIYWGDAKT 551
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 552 D----------------------------------KIEVMNADGTGRRVLVEDKIPHIFG 577
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 578 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREIII 609
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 122/242 (50%), Gaps = 20/242 (8%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTC---QDMNECEQPGYCSQMCTNTKG 89
C ++ G CS+ C P G C CP G L +D TC + + ++ T
Sbjct: 632 CANENGGCSHLCLFRPQGLRCACPIGFELISDMKTCIVPEAFLLFSRRADIRRISLETNN 691
Query: 90 SYIC----SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVV 145
+ + E L++D + + + + +I A + +H +V
Sbjct: 692 NNVAIPLTGVKEASALDFD------VTDNRIYWTDISLKTISRAFMNGSSLEH----VVE 741
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
GLD EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G
Sbjct: 742 FGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG- 800
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+++WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+
Sbjct: 801 -FMYWTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESS 858
Query: 266 SL 267
++
Sbjct: 859 NM 860
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 84/143 (58%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DG+ +L +L + A+ALD NG +Y
Sbjct: 148 KLYWTDSETN----RIEVSNLDGTLRKVLFWQELDQPRAIALDPANGFMY---------- 193
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+T IYWPNGLTLD ++Y+AD+KL+FI N D
Sbjct: 194 -WTDWGEVPKIERAGMDGSSRYIIINTDIYWPNGLTLDYEEEKLYWADAKLNFIHKSNLD 252
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 253 GTNRQAVVRGSLPHPFALTLFED 275
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 379 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPLEG--YIYWTD-DEVRAIRRSFIDGSGS 434
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 435 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 464
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 465 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 511
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 512 ERAALDGSDRVVLVNTSLGWPNGLALDYDEDKIYWGDAKTDKIEVMNADGTGRRVLVEDK 571
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 572 IPHIFGFTLLGD 583
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ SLE ++
Sbjct: 682 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSSLEHVVE 741
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 742 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 797
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 798 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 845
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 846 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 876
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 133/330 (40%), Gaps = 76/330 (23%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S +++I
Sbjct: 931 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNNDNRTCSA---PTTFLLFSQKNAINRM 987
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI--- 184
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 988 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGLTVV 1043
Query: 185 ----------------------------------------------VLAKDNITQPRGMM 198
V+ K + +PR +M
Sbjct: 1044 VSSVPNQNLDMQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRPVGVVLKGDQDRPRAIM 1103
Query: 199 LDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++P G ++++T+ E +P+IER +DG+ R + + + P L LD ++++ADS
Sbjct: 1104 VNPEKG--YMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADS 1161
Query: 258 KLDFIDCKSLE-----------IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
L I+ L I V + LYWID + KI +G
Sbjct: 1162 DLRRIESSDLSGANRIVLEDSNILQPVGLTVFENWLYWIDRQQQMIE-KIDMTGREGRTK 1220
Query: 307 SILVSGQLYEALALDLENGMLYYSTLKCTR 336
QL + A+ E +L Y C++
Sbjct: 1221 VQARIAQLSDIHAVK-ELNILEYRQHPCSQ 1249
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 129/299 (43%), Gaps = 29/299 (9%)
Query: 128 VADLEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL 186
V +E G D ++ I++ + + GL D+ +YW D++LN I + +GTNR +
Sbjct: 200 VPKIERAGMDGSSRYIIINTDIYWPNGLTLDYEEEKLYWADAKLNFIHKSNLDGTNRQAV 259
Query: 187 AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 246
+ ++ P + L L+WTDW + + G + S I+ P +
Sbjct: 260 VRGSLPHPFALTLFEDT----LYWTDWNTHSILACNKYTGEGLREVHS-NIFSPMDIHAF 314
Query: 247 IATRRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP-LKIGKANMDGS 304
R+ + + C L + + V K ++ GV L+ GK DG+
Sbjct: 315 SQQRQPNATNPCGIGNGGCSHLCLMSPV-------KPFYQCACPTGVKLLENGKTCKDGA 367
Query: 305 NASILVSGQL-YEALALDLENGMLYYSTLKCTR------------WLFWTDWGENPRIER 351
+L++ + ++LD + L+ R +++WTD E I R
Sbjct: 368 TELLLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPLEGYIYWTD-DEVRAIRR 426
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+DGS +++ +I P+G+ +D R +Y+ D+ D I+ +GT R+ +I DL
Sbjct: 427 SFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDL 485
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 813 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 871
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 872 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 926
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 927 QAGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNNDNRTCSAPTTFLLFSQKNAINR 986
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 987 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGLTVV 1043
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1044 VSSVPNQNLDMQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRPVGVV------------ 1091
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L GD P A+ ++ E G +Y++
Sbjct: 1092 LKGDQDRPRAIMVNPEKGYMYFT 1114
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 31/171 (18%)
Query: 279 FRKLYWIDEG----GNGVPLKIGKANMDGSNASILVSGQLYEALALDL--ENGMLYYSTL 332
F +L+W+ N L++ A NA+I+V G L +A A+D ++G++Y
Sbjct: 52 FCELWWLGAPLLLYANRRDLRLVDATNGKENATIVVGG-LEDAAAVDFVFDHGLIY---- 106
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
W+D E I+R + + ++ + + P+GL D ++Y+ DS+ +
Sbjct: 107 -------WSDVSEEA-IKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNR 158
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
I+ N DGT R+ + +L + A+ALD NG +Y++ G
Sbjct: 159 IEVSNLDGTLRKVLFWQEL-----------DQPRAIALDPANGFMYWTDWG 198
>gi|449266599|gb|EMC77641.1| Low-density lipoprotein receptor-related protein 2, partial
[Columba livia]
Length = 670
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 158/337 (46%), Gaps = 61/337 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+N + VCDG+ DC +G+DEG C + C+ C+ C+P+P G C C G L+ D
Sbjct: 278 CLNASLVCDGRQDCADGSDEGENCSVP-CQRS---CARLCYPSPKGPRCWCDQGYQLAED 333
Query: 65 SVTCQDMNECEQ--PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII-- 120
++C D++EC + G CSQMC N GSY C C GY+LE D H CK L+
Sbjct: 334 GLSCMDIDECTELGEGVCSQMCLNAPGSYSCGCLPGYLLEPDGHVCKLTGPEPMLLVAVQ 393
Query: 121 ---------SNRHSILVA------------DLEEKG--------KDHRAQDIVVSGL-DL 150
S R +L+ DL E+ + R QD+ + L
Sbjct: 394 SEVLSYGLRSGREEVLLTTDKDRVVFSLDYDLVERKIFWMDLATESIRWQDLNLGKKGTL 453
Query: 151 VEG-----LAYDWIGGHIYWLDSR-----LNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
V+G +A DW+G ++YW D R+E V+ ++ +P ++L
Sbjct: 454 VKGVRSDCIAVDWLGRNLYWTDGAAGQVLATRLEAAWRGTPEYTVVMDGDLDRPHSLVLQ 513
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G L+W++ G +PR+ MDGS R +++ ++ WP L LD+ TRR+++ D KL
Sbjct: 514 PLAGL--LYWSEVGSHPRLMEATMDGSRRHVLLAQELGWPTALALDLPTRRIFWLDEKLG 571
Query: 261 FIDCKSLE-----------IKTNVNYSTIFRKLYWID 286
+ L+ +++ + +LYW D
Sbjct: 572 SVGSARLDGTSVKVLHLHCVRSPFAAAVCEGQLYWSD 608
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN-VNYSTIFRKLYWID-EGG 289
++ KI+W +D+AT + + D L ++++ + + R LYW D G
Sbjct: 425 LVERKIFW-----MDLATESIRWQDLNLGKKGTLVKGVRSDCIAVDWLGRNLYWTDGAAG 479
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP 347
+ ++ A ++++ G L +L L+ G+LY W++ G +P
Sbjct: 480 QVLATRLEAAWRGTPEYTVVMDGDLDRPHSLVLQPLAGLLY-----------WSEVGSHP 528
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
R+ MDGS R +++ ++ WP L LD+ TRR+++ D KL + DGT
Sbjct: 529 RLMEATMDGSRRHVLLAQELGWPTALALDLPTRRIFWLDEKLGSVGSARLDGT 581
>gi|390981015|pdb|4DG6|A Chain A, Crystal Structure Of Domains 1 And 2 Of Lrp6
Length = 616
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 116/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 60 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 119
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++
Sbjct: 120 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKL 177
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 178 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 203
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L +LY WTDW
Sbjct: 204 SLPHPFALTLFEDILY-----------WTDW 223
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 145/334 (43%), Gaps = 63/334 (18%)
Query: 38 GLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSC 95
G CS+ C +P+ C CP G L + TC+D + ++ + S
Sbjct: 272 GGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKD--GATELLLLARRTDLRRISLDTPD 329
Query: 96 NEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHR------AQDIVVSGLD 149
VL+ ++ I H+ A I D E + +Q +V + +
Sbjct: 330 FTDIVLQLED-----IRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIA 384
Query: 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
+G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++LDP G +++
Sbjct: 385 HPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVG--YMY 442
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEI 269
WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K D
Sbjct: 443 WTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTD--------- 493
Query: 270 KTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
KI N DG+ +LV ++ L +Y
Sbjct: 494 -------------------------KIEVMNTDGTGRRVLVEDKIPHIFGFTLLGDYVY- 527
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ + R II
Sbjct: 528 ----------WTDW-QRRSIERVHKRSAEREVII 550
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 89 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 134
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++Y+AD+KL+FI N D
Sbjct: 135 -WTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 193
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 194 GTNRQAVVKGSLPHPFALTLFED 216
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 148/346 (42%), Gaps = 95/346 (27%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G CS +C + K Y C+C G L + TCK + + L+++ R
Sbjct: 272 GGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCK--DGATELLLLARR------------ 317
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
+ L RI + + T+ IVL ++I
Sbjct: 318 --------------------------------TDLRRISLDTPDFTD-IVLQLEDIRHAI 344
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ DP G +++WTD E I R +DGS +++ +I P+G+ +D
Sbjct: 345 AIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVD--------- 392
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ R LYW D G + +I ++G+ IL+S L
Sbjct: 393 ---------------------WVARNLYWTDTGTD----RIEVTRLNGTMRKILISEDLE 427
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
E A+ L+ + Y ++WTDWGE P+IER +DGS+R +++T + WPNGL L
Sbjct: 428 EPRAIVLDPMVGY---------MYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLAL 478
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
D ++Y+ D+K D I+ N DGTGR+ ++ + F L+GD
Sbjct: 479 DYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHIFGFTLLGD 524
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 27/157 (17%)
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDL--ENGMLYYSTLKCTRWLFWTDWGEN 346
N L++ A NA+I+V G L +A A+D +G++Y W+D E
Sbjct: 7 ANRRDLRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIY-----------WSDVSEE 54
Query: 347 PRIERIGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
I+R + + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ +
Sbjct: 55 A-IKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVL 113
Query: 406 ILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+L + A+ALD +G +Y++ G
Sbjct: 114 FWQEL-----------DQPRAIALDPSSGFMYWTDWG 139
>gi|355333057|pdb|3S94|A Chain A, Crystal Structure Of Lrp6-E1e2
gi|355333058|pdb|3S94|B Chain B, Crystal Structure Of Lrp6-E1e2
Length = 619
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 116/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 68 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 127
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++
Sbjct: 128 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKL 185
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 186 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 211
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L +LY WTDW
Sbjct: 212 SLPHPFALTLFEDILY-----------WTDW 231
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 145/334 (43%), Gaps = 63/334 (18%)
Query: 38 GLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSC 95
G CS+ C +P+ C CP G L + TC+D + ++ + S
Sbjct: 280 GGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKD--GATELLLLARRTDLRRISLDTPD 337
Query: 96 NEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHR------AQDIVVSGLD 149
VL+ ++ I H+ A I D E + +Q +V + +
Sbjct: 338 FTDIVLQLED-----IRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIA 392
Query: 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
+G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++LDP G +++
Sbjct: 393 HPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVG--YMY 450
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEI 269
WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K D
Sbjct: 451 WTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTD--------- 501
Query: 270 KTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
KI N DG+ +LV ++ L +Y
Sbjct: 502 -------------------------KIEVMNTDGTGRRVLVEDKIPHIFGFTLLGDYVY- 535
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ + R II
Sbjct: 536 ----------WTDW-QRRSIERVHKRSAEREVII 558
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 97 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 142
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++Y+AD+KL+FI N D
Sbjct: 143 -WTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 201
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 202 GTNRQAVVKGSLPHPFALTLFED 224
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 148/346 (42%), Gaps = 95/346 (27%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G CS +C + K Y C+C G L + TCK + + L+++ R
Sbjct: 280 GGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCK--DGATELLLLARR------------ 325
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
+ L RI + + T+ IVL ++I
Sbjct: 326 --------------------------------TDLRRISLDTPDFTD-IVLQLEDIRHAI 352
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ DP G +++WTD E I R +DGS +++ +I P+G+ +D
Sbjct: 353 AIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVD--------- 400
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ R LYW D G + +I ++G+ IL+S L
Sbjct: 401 ---------------------WVARNLYWTDTGTD----RIEVTRLNGTMRKILISEDLE 435
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
E A+ L+ + Y ++WTDWGE P+IER +DGS+R +++T + WPNGL L
Sbjct: 436 EPRAIVLDPMVGY---------MYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLAL 486
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
D ++Y+ D+K D I+ N DGTGR+ ++ + F L+GD
Sbjct: 487 DYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHIFGFTLLGD 532
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 27/152 (17%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIER 351
L++ A NA+I+V G L +A A+D +G++Y W+D E I+R
Sbjct: 20 LRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIY-----------WSDVSEEA-IKR 66
Query: 352 IGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 67 TEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL 126
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 127 -----------DQPRAIALDPSSGFMYWTDWG 147
>gi|195481687|ref|XP_002101739.1| GE15450 [Drosophila yakuba]
gi|194189263|gb|EDX02847.1| GE15450 [Drosophila yakuba]
Length = 3879
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 198/462 (42%), Gaps = 106/462 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C++ + VC+ DC + +DE C++ EC K + C + C T G C C G L
Sbjct: 2332 QCIDYSLVCNKYPDCADESDEPAHCNVNECAKVEINQCGHKCVDTLTGYYCDCNEGYKLL 2391
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYV-LEYDNHTCKAINHSAAFLII 120
D C D++EC EQPG CSQ C+NT G + C C+E Y + D HTCK + +LI
Sbjct: 2392 ADGKACADVDECLEQPGACSQHCSNTPGGFYCKCDETYYERQNDEHTCKRKDKIPPWLIF 2451
Query: 121 SNRHSILVADLEEKGKDHRAQDIV-VSGLDL----------------------------- 150
+N++ + ++ + QD++ V LD
Sbjct: 2452 TNKYYVRNMSVDGHQYNLMHQDLMNVVALDFDIREEYMYFCDVTAKTIFRAKYGEADDEM 2511
Query: 151 --------------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+EG+A DW+G +YWLD ++V + +GT R L + + PR
Sbjct: 2512 PPEREAVIRHDSHGLEGIAIDWVGRKLYWLDRHSKNLDVSELDGTKRKTL-RSGVVDPRA 2570
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYF 254
+++ PG +L++T W I ++GMDGSN S I+ + I WPN L++D T R+Y+
Sbjct: 2571 IVV--HPGIGYLYFTSWHLQAYIAKMGMDGSNFSRILNWNDGIAWPNALSIDYFTDRIYW 2628
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG-Q 313
AD+ LD+ I A+++G + ++SG +
Sbjct: 2629 ADAHLDY----------------------------------IAYADLEGRHRHTVLSGSK 2654
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
+ AL L + +Y W+DW + G+N T++ + P L
Sbjct: 2655 VPHVFALSLFDDYIY-----------WSDWNLKAIVRANKFHGANY-TVLRNTTHRPYDL 2702
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFT 415
++ R +L + + C + G + LI E T
Sbjct: 2703 HINHPLR-------QLPYTNPCGTNNGGCSHLCLIAPPPEST 2737
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 130/514 (25%), Positives = 221/514 (42%), Gaps = 88/514 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C+ +++CDG DC +G DE C +A C C C P+ G +C C PG+ L+
Sbjct: 260 KCILKSQLCDGNRDCEDGTDEETNCSMASCPALS--CEFKCGPSLTGGVCYCKPGQSLAP 317
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVL------------------EYDN 105
D+ TC D++EC + G+C Q+CTNT GSY C C +GY L +D
Sbjct: 318 DNRTCVDLDECAEWGHCDQLCTNTMGSYTCQCAQGYTLINDSKCIAPDANNLQLIFAHDR 377
Query: 106 HTCKAINHSAAFLIISN------------RHSILVADLEEKGKDH---RAQDIVVSGLDL 150
+ + H +++N R+++ +D++ + AQ+ VS D
Sbjct: 378 AIMRMLPHGTEPKVLANATSAAGVTFHYARNTLYWSDIKTRKVQSLPLDAQNKAVSPFDQ 437
Query: 151 V-------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
LA DW+G IY D +I+V + +G V+ N+T P + LDP+
Sbjct: 438 TLPGTWAPVALAVDWVGDKIYVADLVGQKIDVFELSGQWHAVVLGSNLTSPADLALDPTA 497
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +F D G+ + R MDG++ +I+S Y +G+T+DI +RV++ DS LD+I+
Sbjct: 498 GL--MFVADGGQ---VLRAHMDGTHARSIVSEAAYKASGVTVDIIGKRVFWCDSLLDYIE 552
Query: 264 C------------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+ ++ + + ++YW D G+ + + K +G SI V+
Sbjct: 553 SVDYEGAHRVMVLRGQQVPSPSRLALFENRIYWTDATKQGI-MSVDK--FEGP-TSIQVT 608
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
Y+A + G++ L R NP G G N I++ P
Sbjct: 609 ---YKAKDIREPKGIIAVHALSQPRV-------SNPCGNNNG--GCNHMCIVTAVKGAPT 656
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALA--- 428
GL A Y ++ L + QQ + ++E + D +P ++
Sbjct: 657 GLGFRCACSTGYQLETDLKLCKPVSEFLMYSQQRFIKGKVLEPVIEGFSDAIMPVVSRRA 716
Query: 429 ------LDLENGMLYYSTEGAEFLKTPLFCITRN 456
D + +YYS + L+ ++ + RN
Sbjct: 717 RFVGLDFDARDEFIYYS----DVLQDVIYRVHRN 746
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 171/429 (39%), Gaps = 104/429 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHP-TPLGALCTCPPGEIL 61
C+ ++VCD DC + +DE + C G C + CH T G +CTC PG I+
Sbjct: 3204 HCIERSQVCDFSDDCGDASDELGCHHTSSCSEANRGGCQHHCHNLTDGGYICTCYPGYII 3263
Query: 62 SNDSVT-CQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVL------------------ 101
+ D+ C D++EC + CS C N G+Y CSC EG+ L
Sbjct: 3264 AVDNKKKCADVDECLTRQHTCSHQCHNLNGTYSCSCREGFHLTDGASGVCRAEKEDVILV 3323
Query: 102 ----------------EYD----NHTCKAINHSAAFLII--------SNRHSILVADLEE 133
E+D +A+++ A II + + S +V ++
Sbjct: 3324 FANGQEIRGLDLQKREEFDVIAAEKRIEALDYDAQQQIIFWADSYDKTIKRSYMVNAIDG 3383
Query: 134 KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD------SRLNRIEVCDENGTNRIVLA 187
+ K AQD+ + G +A DW+ ++YW + R+ V +G R +
Sbjct: 3384 RAKIGFAQDLNMKGGSKPTAVAVDWLASNLYWTEMDRTGSKPRGRVMVAKTDGRYRRSIV 3443
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P + ++P G ++W+D G P+IE MDGS R +I+ +I P GLT+D
Sbjct: 3444 NAGLEVPTSIAVNPQLGR--IYWSDAGSAPKIEVSWMDGSKRRPLITEQIRHPAGLTIDY 3501
Query: 248 ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307
+ + +YW+D N I DGS
Sbjct: 3502 SQDHI-----------------------------IYWVDTKLNA----IESMRADGSRRK 3528
Query: 308 ILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 366
+V G QL ++LDL +++ T D GE R ++ G ++
Sbjct: 3529 AIVRGDQLRHPVSLDLFESNMFWMT---------RDTGELVRQDKFGR---GVQVVLHRN 3576
Query: 367 IYWPNGLTL 375
+ P+GL +
Sbjct: 3577 LVNPSGLKV 3585
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 99/194 (51%), Gaps = 17/194 (8%)
Query: 141 QDIVVSGL--DLVEGLAYDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRG 196
Q +V G+ + + GL DW+ G++Y+ + N +EVC +G+NR VL K PR
Sbjct: 1369 QHVVKDGIGSNGIRGLTIDWVAGNMYFTNVYPHENYVEVCWLDGSNRKVLVKTTTDAPRE 1428
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ ++P R L+W D+G++PRI + +DGS + ++++ I P LT+D+ T +Y+ D
Sbjct: 1429 LAVNPI--KRLLYWIDYGQHPRIGKALLDGSKWTPLVTSGISLPRDLTIDMQTHDIYWVD 1486
Query: 257 SKLDFIDCKSL----------EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
SKLD I S ++ + + +YW+D V K K + + +
Sbjct: 1487 SKLDTIQKISYNGANRKVIRRDLPNPMGIAVYLNDVYWVDRNLMTV-FKASKHSANETAT 1545
Query: 307 SILVSGQLYEALAL 320
S+ + + +A+
Sbjct: 1546 SVRTNLEKLRDIAI 1559
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 52/240 (21%)
Query: 78 GYCSQMC--TNTKGS-----YICSCNEGYVLEYDNHTCKAINH----------------- 113
G C+ MC T KG+ + C+C+ GY LE D CK ++
Sbjct: 640 GGCNHMCIVTAVKGAPTGLGFRCACSTGYQLETDLKLCKPVSEFLMYSQQRFIKGKVLEP 699
Query: 114 ------SAAFLIISNRHSILVADLEEKG--------------KDHR---AQDIVVSGLDL 150
A ++S R + D + + + HR ++IV++ +
Sbjct: 700 VIEGFSDAIMPVVSRRARFVGLDFDARDEFIYYSDVLQDVIYRVHRNGTGREIVLASQNE 759
Query: 151 -VEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
VEGLA DW ++Y++DSR + V N T+R L K N+ +PR +++ P+ G ++
Sbjct: 760 GVEGLAVDWASKNLYYIDSRKGTLNVLSTRNVTHRRTLLK-NLKRPRAIVVHPNRG--FI 816
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
F+++W I R DGS + + WPNGL++D RVY+ D+ LD + +L+
Sbjct: 817 FFSEWDRPANITRANTDGSGLLVFKNVTLGWPNGLSIDFKEDRVYWCDALLDHVQHANLD 876
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 89/185 (48%), Gaps = 42/185 (22%)
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EG+AYDW IYW DS N I + +G+ +++A+ + +PR ++LDP GT LF+T
Sbjct: 1704 EGIAYDWTQQKIYWTDSSNNSIYAMNLDGSELVMIAR--VERPRAIVLDPCNGT--LFFT 1759
Query: 212 DWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
DWG + +I R M GS + I+ + P+GL +D RR
Sbjct: 1760 DWGRFGTSGKIFRTTMAGSLKRAIVDKDLSQPSGLAIDYDERR----------------- 1802
Query: 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLY 328
LYW D V KI ++++DG N +LV+ +Y A+ + +Y
Sbjct: 1803 -------------LYWTD----AVREKIERSDLDGQNRELLVAATIY-PFAITVFRNYIY 1844
Query: 329 YSTLK 333
++ L+
Sbjct: 1845 WTDLQ 1849
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGSN +LV L + R L+W D+G++PRI + +DGS +
Sbjct: 1410 LDGSNRKVLVKTTTDAPRELAVN---------PIKRLLYWIDYGQHPRIGKALLDGSKWT 1460
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
++++ I P LT+D+ T +Y+ DSKLD I +Y+G R +VI DL
Sbjct: 1461 PLVTSGISLPRDLTIDMQTHDIYWVDSKLDTIQKISYNGANR-KVIRRDL 1509
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+ Y +K+YW D N I N+DGS ++ + A+ LD NG L+++
Sbjct: 1706 IAYDWTQQKIYWTDSSNN----SIYAMNLDGSELVMIARVERPRAIVLDPCNGTLFFTD- 1760
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
W +G + +I R M GS + I+ + P+GL +D RR+Y+ D+ + I
Sbjct: 1761 -------WGRFGTSGKIFRTTMAGSLKRAIVDKDLSQPSGLAIDYDERRLYWTDAVREKI 1813
Query: 393 DFCNYDGTGRQQVI 406
+ + DG R+ ++
Sbjct: 1814 ERSDLDGQNRELLV 1827
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 131/343 (38%), Gaps = 80/343 (23%)
Query: 70 DMNECEQ--PGYCSQMC----------TNTKG-SYICSCNEGYVLEYDNHTCKAINHSAA 116
D N C G C Q+C + T G ++ C C G L D C+ +N
Sbjct: 1569 DTNPCAHLGNGGCDQLCFSFPPDGGATSGTSGRNFRCECATGK-LSADERKCEVVNE--- 1624
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-NRIEV 175
+L+ + R I +L+ + ++ L V GL +D+ + + R +I
Sbjct: 1625 YLVFATRTEIRAVNLDPHSTE--VPFTPLTNLTNVVGLDFDFAHNRMLYTQIRPWAKIAY 1682
Query: 176 CDEN--GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
N G + I + + P G+ D + + ++WTD N I + +DGS ++
Sbjct: 1683 TKANKPGHDDITVVLNKGINPEGIAYDWT--QQKIYWTDSSNN-SIYAMNLDGS--ELVM 1737
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
++ P + LD ++F D W G G
Sbjct: 1738 IARVERPRAIVLDPCNGTLFFTD---------------------------W---GRFGTS 1767
Query: 294 LKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
KI + M GS +V L + LA+D + R L+WTD +IER
Sbjct: 1768 GKIFRTTMAGSLKRAIVDKDLSQPSGLAIDYDE-----------RRLYWTD-AVREKIER 1815
Query: 352 IGMDGSNRSTIISTKIYWPNGLTL--------DIATRRVYFAD 386
+DG NR +++ IY P +T+ D+ R VY A+
Sbjct: 1816 SDLDGQNRELLVAATIY-PFAITVFRNYIYWTDLQLRGVYRAE 1857
>gi|380797303|gb|AFE70527.1| low-density lipoprotein receptor-related protein 1B precursor,
partial [Macaca mulatta]
Length = 1696
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/287 (34%), Positives = 140/287 (48%), Gaps = 44/287 (15%)
Query: 11 VCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ 69
+C+ K DC +G+DE C + EC K CS C P+ C C PG L +D TC
Sbjct: 6 LCNNKDDCGDGSDER-NCHINECLSKKVSGCSQDCQDLPISYKCKCWPGFQLKDDGKTCV 64
Query: 70 DMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIISNRHSILV 128
D++EC CSQ C NT G+Y C C +GY ++ DN + CK+++ FLI+++ H I
Sbjct: 65 DIDECSSGFPCSQQCINTYGTYKCLCTDGYEIQPDNPNGCKSLSDEEPFLILADHHEIRK 124
Query: 129 AD-------LEEKGK--------DHRAQDI------------------------VVSGLD 149
L ++G D+R + I VV
Sbjct: 125 ISTDGSNYTLLKQGLNNVIAIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDIKVVHNTA 184
Query: 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
+ LA DWIG ++YW D+ IEV NG +L + PR + LDP G +L+
Sbjct: 185 VPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTILVSKRLKFPRDLSLDPRAG--YLY 242
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
W D E P I R+GMDG+N+S +I TKI P LT+D R+Y+AD
Sbjct: 243 WIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLYWAD 289
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 133/328 (40%), Gaps = 74/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSN--TCHPTPLGALCTCPP 57
+C+ + CD DC +G+DE GC +A C+ C + C+ C C P
Sbjct: 870 KCIPMDLQCDRLDDCGDGSDE-QGCRIAPTEYTCEDNVNPCGDDANCNQIKTSVFCRCKP 928
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G + C+D+NEC G CS C N +GSY C C++ + + N+TC A
Sbjct: 929 GFQRNMKHRQCEDLNECLVFGTCSHQCINVEGSYKCVCDQNF--QERNNTCIAKGSEDQV 986
Query: 118 LIISNRHSIL--------------VADLEE------------------------------ 133
L I+N IL ++ +E
Sbjct: 987 LYIANDTDILGFIYPFNYSGDHQQISHIEHNSRITGMDVYYQRDMIIWSTQFNPGGIFYK 1046
Query: 134 --KGKDHRAQD--IVVSGLDLVEGLAYDWIGGHIYWLD-SRLN--------------RIE 174
G++ R + ++ +A DW+ G+IYW D SR++ I
Sbjct: 1047 RIHGREKRQANSGLICPEFKRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSIN 1106
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V NG N L + +P + ++P G ++WT G++ IE MDG+ R ++
Sbjct: 1107 VGQLNGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVVGDHSHIEEAAMDGTLRRILVQ 1164
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D + R+Y+AD +L I
Sbjct: 1165 KNLQRPTGLAVDYFSERIYWADFELSII 1192
>gi|449271872|gb|EMC82057.1| Low-density lipoprotein receptor-related protein 6, partial
[Columba livia]
Length = 1594
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 114/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 61 EFNKSGSVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 120
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDP+ G +++WTDWGE P+IER GMDGS+RS I++T IYWPNGLTLD ++
Sbjct: 121 QPRAIALDPARG--FMYWTDWGEVPKIERAGMDGSSRSIIVNTDIYWPNGLTLDYEEAKL 178
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DGS+ +V G
Sbjct: 179 YWADAKLNFIH----------------------------------KSNLDGSHRQAVVKG 204
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 205 SLPHPFALTLFGDTLY-----------WTDW 224
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 143/329 (43%), Gaps = 93/329 (28%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR------------ 123
G CS +C + TK SY C+C G L + TCK + + L+++ R
Sbjct: 273 GGCSHLCLMSPTKPSYQCACPTGVKLLENGKTCK--DGATELLLLARRTDLRRISLDTPD 330
Query: 124 ------------HSILV-----------ADLEEKGKDHR------AQDIVVSGLDLVEGL 154
H+I + D E + +Q +V + + +G+
Sbjct: 331 FTDIVLPLEDIRHAIAIDFDPLEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGI 390
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++LDP G +++WTDWG
Sbjct: 391 AVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVG--YMYWTDWG 448
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
E P+IER +DGS+R +++T + WPNGL LD A ++Y+ D+K D
Sbjct: 449 EIPKIERAALDGSDRIVLVNTSLGWPNGLALDYAEGKIYWGDAKTD-------------- 494
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
KI N DG+ +LV +L L +Y
Sbjct: 495 --------------------KIEVMNADGTGRRVLVEDKLPHIFGFTLLGDYVY------ 528
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ + R II
Sbjct: 529 -----WTDW-QRRSIERVHKRTAEREIII 551
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 85/143 (59%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD G +Y
Sbjct: 90 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPARGFMY---------- 135
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+RS I++T IYWPNGLTLD ++Y+AD+KL+FI N D
Sbjct: 136 -WTDWGEVPKIERAGMDGSSRSIIVNTDIYWPNGLTLDYEEAKLYWADAKLNFIHKSNLD 194
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
G+ RQ V+ L F L GD
Sbjct: 195 GSHRQAVVKGSLPHPFALTLFGD 217
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 120/242 (49%), Gaps = 20/242 (8%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTC---QDMNECEQPGYCSQMCTNTKG 89
C G CS+ C P G C CP G L ND TC + + ++ T
Sbjct: 574 CAEDNGGCSHLCLYRPQGLRCACPIGLELINDMKTCIVPEAFLLFSRRADIRRISLETNN 633
Query: 90 SYIC----SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVV 145
+ + E L++D + + + + +I A + +H +V
Sbjct: 634 NNVAIPLTGVKEASALDFD------VTDNRIYWTDISLKTISRAFMNGSALEH----VVE 683
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
GLD EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G
Sbjct: 684 FGLDYPEGMAVDWLGKNLYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEG- 742
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+++WT+WG P+I+R MDG+ R+T++ + NGLT+D A RR+Y+ D + I+
Sbjct: 743 -FMYWTEWGGKPKIDRAAMDGTERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESS 800
Query: 266 SL 267
++
Sbjct: 801 NM 802
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 624 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 683
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG + +LV L ALALD
Sbjct: 684 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVAKLDGQHRQVLVWKDLDSPRALALDP 739
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDG+ R+T++ + NGLT+D A RR+
Sbjct: 740 AEGFMY-----------WTEWGGKPKIDRAAMDGTERTTLVP-NVGRANGLTIDYAKRRL 787
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R ++I DL F
Sbjct: 788 YWTDLDTNLIESSNMLGLDR-EIIADDLPHPF 818
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 125/310 (40%), Gaps = 78/310 (25%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S +++I
Sbjct: 873 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNSDNRTCSA---PTTFLLFSQKNAINRM 929
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI--- 184
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 930 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNIIRKAQEDGSQSLTVV 985
Query: 185 ----------------------------------------------VLAKDNITQPRGMM 198
V+ K + +PR ++
Sbjct: 986 TSPVPNQNLDMQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRPMGVVLKGDQDRPRAIV 1045
Query: 199 LDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++P G ++++T+ E +P+IER +DG+ R + + + P L +D ++++ADS
Sbjct: 1046 VNPEKG--YMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALAIDSQLGKLFWADS 1103
Query: 258 KLDFIDCKSLE-----------IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
L I+ L I V + LYWID I K +M G
Sbjct: 1104 DLRRIESSDLSGANRIVLEDSNILQPVGLTVFENWLYWIDRQQQ----MIEKIDMTGREG 1159
Query: 307 SILVSGQLYE 316
V ++ +
Sbjct: 1160 RTKVQARIAQ 1169
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 129/299 (43%), Gaps = 29/299 (9%)
Query: 128 VADLEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL 186
V +E G D ++ I+V + + GL D+ +YW D++LN I + +G++R +
Sbjct: 142 VPKIERAGMDGSSRSIIVNTDIYWPNGLTLDYEEAKLYWADAKLNFIHKSNLDGSHRQAV 201
Query: 187 AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 246
K ++ P + L L+WTDW + + G + I S I+ P +
Sbjct: 202 VKGSLPHPFALTLFGDT----LYWTDWNTHSILACSKYSGEDLREIHS-NIFSPMDIHAF 256
Query: 247 IATRRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP-LKIGKANMDGS 304
R+ + ++ C L + + S + GV L+ GK DG+
Sbjct: 257 SQKRQPNATNPCGINNGGCSHLCLMSPTKPS-------YQCACPTGVKLLENGKTCKDGA 309
Query: 305 NASILVSGQL-YEALALDLENGMLYYSTLKCTR------------WLFWTDWGENPRIER 351
+L++ + ++LD + L+ R +++WTD E I R
Sbjct: 310 TELLLLARRTDLRRISLDTPDFTDIVLPLEDIRHAIAIDFDPLEGYIYWTD-DEVRAIRR 368
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+DGS +++ +I P+G+ +D R +Y+ D+ D I+ +GT R+ +I DL
Sbjct: 369 SFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDL 427
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 23/150 (15%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
L++ A NA+++V G L +A A+D ++ L ++W+D E I+R
Sbjct: 13 LRLVDAANGKENATVIVGG-LEDAAAVDF----VFVKGL-----IYWSDVSEEA-IKRTE 61
Query: 354 MDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+ S ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 62 FNKSGSVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL-- 119
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD G +Y++ G
Sbjct: 120 ---------DQPRAIALDPARGFMYWTDWG 140
>gi|449482387|ref|XP_002193879.2| PREDICTED: low-density lipoprotein receptor-related protein 6
[Taeniopygia guttata]
Length = 1610
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 115/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIE+ + +G+ R VL +
Sbjct: 77 EFNKSGSIQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIELSNLDGSLRKVLFWQELD 136
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDP+ G +++WTDWGE P+IER GMDGS+RS I++T IYWPNGLTLD +++
Sbjct: 137 QPRAIALDPARG--FMYWTDWGEAPKIERAGMDGSSRSIIVNTDIYWPNGLTLDYEEQKL 194
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DGS+ +V G
Sbjct: 195 YWADAKLNFIH----------------------------------KSNLDGSHRQAVVKG 220
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 221 SLPHPFALTLFGDTLY-----------WTDW 240
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 144/329 (43%), Gaps = 93/329 (28%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR------------ 123
G CS +C + TK SY C+C G L + TCK + + A L+++ R
Sbjct: 289 GGCSHLCLMSPTKPSYQCACPTGVKLLENGKTCK--DGATALLLLARRTDLRRISLDTPD 346
Query: 124 ------------HSILV-----------ADLEEKGKDHR------AQDIVVSGLDLVEGL 154
H+I + D E + +Q +V + + +G+
Sbjct: 347 FTDIVLPLEDIRHAIAIDFDPLEGYIYWTDDEVRAIRRSFLDGSGSQFVVTAQIAHPDGI 406
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++LDP G +++WTDWG
Sbjct: 407 AVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVG--YMYWTDWG 464
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
E P+IER +DGS+R +++T + WPNGL LD A ++Y+ D+K D
Sbjct: 465 EIPKIERAALDGSDRIVLVNTSLGWPNGLALDYAESKIYWGDAKTD-------------- 510
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
KI N DG+ +LV +L L +Y
Sbjct: 511 --------------------KIEVMNADGTGRRVLVEDKLPHIFGFTLLGDYIY------ 544
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ + R II
Sbjct: 545 -----WTDW-QRRSIERVHKCTAEREIII 567
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N + L +N+DGS +L +L + A+ALD G +Y
Sbjct: 106 KLYWTDSETNRIEL----SNLDGSLRKVLFWQELDQPRAIALDPARGFMY---------- 151
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+RS I++T IYWPNGLTLD +++Y+AD+KL+FI N D
Sbjct: 152 -WTDWGEAPKIERAGMDGSSRSIIVNTDIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 210
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
G+ RQ V+ L F L GD
Sbjct: 211 GSHRQAVVKGSLPHPFALTLFGD 233
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 120/242 (49%), Gaps = 20/242 (8%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTC---QDMNECEQPGYCSQMCTNTKG 89
C G CS+ C P G C CP G L +D TC + + ++ T
Sbjct: 590 CAEDNGGCSHLCLYRPQGLRCACPIGLELISDMKTCIVPEAFLLFSRRADIRRISLETNN 649
Query: 90 SYIC----SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVV 145
+ + E L++D + + + + +I A + +H +V
Sbjct: 650 NNVAIPLTGVKEASALDFD------VTDNRIYWTDISLKTISRAFMNGSALEH----VVE 699
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
GLD EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G
Sbjct: 700 FGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG- 758
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+++WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+
Sbjct: 759 -FMYWTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESS 816
Query: 266 SL 267
S+
Sbjct: 817 SM 818
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 640 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 699
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 700 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 755
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 756 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 803
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ + G R ++I DL F
Sbjct: 804 YWTDLDTNLIESSSMLGLDR-EIIADDLPHPF 834
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 125/310 (40%), Gaps = 78/310 (25%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S +++I
Sbjct: 889 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNSDNRTCSA---PTTFLLFSQKNAINRM 945
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI--- 184
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 946 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNIIRKAQEDGSQSLTVV 1001
Query: 185 ----------------------------------------------VLAKDNITQPRGMM 198
V+ K + +PR ++
Sbjct: 1002 TSPVPNQNLDMQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRPMGVVLKGDQDRPRAIV 1061
Query: 199 LDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++P G ++++T+ E +P+IER +DG+ R + + + P L +D ++++ADS
Sbjct: 1062 VNPEKG--YMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALAVDGQLGKLFWADS 1119
Query: 258 KLDFIDCKSLE-----------IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
L I+ L I V + LYWID I K +M G
Sbjct: 1120 DLRRIESSDLSGANRIVLEDSNILQPVGLTVFENWLYWIDRQQQ----MIEKIDMTGREG 1175
Query: 307 SILVSGQLYE 316
V ++ +
Sbjct: 1176 RTKVQARIAQ 1185
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 130/297 (43%), Gaps = 31/297 (10%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D ++ I+V + + GL D+ +YW D++LN I + +G++R + K
Sbjct: 161 IERAGMDGSSRSIIVNTDIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGSHRQAVVKG 220
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++ P + L L+WTDW + + G + I S I+ P + +
Sbjct: 221 SLPHPFALTLFGDT----LYWTDWNTHSILACSKYSGEDLREIHS-NIFSPMDIHA-FSQ 274
Query: 250 RRVYFADSKLDFID--CKSLEIKTNVNYSTIFRKLYWIDEGGNGVP-LKIGKANMDGSNA 306
RR A + + C L + + S + GV L+ GK DG+ A
Sbjct: 275 RRQPNATNPCGTNNGGCSHLCLMSPTKPS-------YQCACPTGVKLLENGKTCKDGATA 327
Query: 307 SILVSGQL-YEALALDLENGMLYYSTLKCTR------------WLFWTDWGENPRIERIG 353
+L++ + ++LD + L+ R +++WTD E I R
Sbjct: 328 LLLLARRTDLRRISLDTPDFTDIVLPLEDIRHAIAIDFDPLEGYIYWTD-DEVRAIRRSF 386
Query: 354 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+DGS +++ +I P+G+ +D R +Y+ D+ D I+ +GT R+ +I DL
Sbjct: 387 LDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDL 443
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 23/150 (15%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
L++ A NA+++V G L +A A+D ++ L ++W+D E I+R
Sbjct: 29 LRLVDAAHGKENATVIVGG-LEDAAAVDF----VFLKGL-----IYWSDVSEEA-IKRTE 77
Query: 354 MDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+ S ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 78 FNKSGSIQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIELSNLDGSLRKVLFWQEL-- 135
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD G +Y++ G
Sbjct: 136 ---------DQPRAIALDPARGFMYWTDWG 156
>gi|444525491|gb|ELV14038.1| Low-density lipoprotein receptor [Tupaia chinensis]
Length = 920
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 181/405 (44%), Gaps = 58/405 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 330 CITLDKVCNAVRDCRDWSDEPLKECGTNECLDNNGGCSHVCNDLKIGHECLCPDGFRLV- 388
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D C+D++EC++P CSQ+C N +GS+ C C+EG+ L+ TCK++ A+L+ +NR
Sbjct: 389 DQRKCEDIDECQEPDTCSQLCVNLEGSFKCECDEGFQLDLLTKTCKSVG-PIAYLLFTNR 447
Query: 124 HSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR 183
H + L D R ++ L V L + IYW D +I +
Sbjct: 448 HEVRKMTL-----DRREYASLIPNLKNVVALDTEVARNRIYWSDLSQRKIYRAPPASPPQ 502
Query: 184 IVLAKDNITQPRGMMLDP-SPGTRWLFWTDWGENPRIERIGMDG-SNRSTIISTKIYWPN 241
A P +PG ++ P + G S+ T+IS + P+
Sbjct: 503 SPTAPHPAQPGLSESWAPMAPGLTFVL-----PPPSTQLDGAHSFSSYDTVISGDLQAPD 557
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
GL +D +Y+ DS L + S+ V T+F++
Sbjct: 558 GLAVDWIHGNIYWTDSILGTV---SVADTKGVKRKTLFKE-------------------- 594
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
G A+A+D +G +Y WTDWG +IE+ G++G + +
Sbjct: 595 ---------RGSKPRAIAVDPVHGFMY-----------WTDWGTPAKIEKGGLNGVDVYS 634
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+++ I WPNG+TLD++ R+Y+ DSKL I + +G R+ V+
Sbjct: 635 LVTEDIQWPNGITLDLSNGRLYWVDSKLHSISSIDVNGGNRKTVL 679
>gi|195164031|ref|XP_002022852.1| GL16506 [Drosophila persimilis]
gi|194104914|gb|EDW26957.1| GL16506 [Drosophila persimilis]
Length = 3916
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 154/314 (49%), Gaps = 52/314 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C++ + VC+ DC + +DE C++ EC K + C + C T C C G L
Sbjct: 2368 QCIDYSLVCNKYPDCSDESDEPAHCNVDECAKVEINQCGHKCVDTLTSYYCDCNEGYKLL 2427
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYV-LEYDNHTCKAINHSAAFLII 120
D C D++EC EQPG CSQ C+NT GS+ C C+E Y + D HTCK ++ +LI
Sbjct: 2428 ADGKACADVDECLEQPGACSQHCSNTPGSFYCKCDETYYERQNDEHTCKRKDNIPPWLIF 2487
Query: 121 SNRHSILVADLEEKGKDHRAQDIV-VSGLDL----------------------------- 150
+N++ + ++ + QD++ V LD
Sbjct: 2488 TNKYYVRNMSVDGHQYNLMHQDLMNVVALDFDIREEYMYFCDVTAKTIFRAKYTSPEDET 2547
Query: 151 --------------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+EG+A DW+G +YWLD ++V + +GT R L + + PR
Sbjct: 2548 PPEREAVIRHDSHGLEGIAIDWVGRKLYWLDRHSKNLDVSELDGTKRKTL-RSGVVDPRA 2606
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYF 254
+++ PG +L++T W I ++GMDGSN + I+ + I WPN L++D T R+Y+
Sbjct: 2607 IVV--HPGIGYLYFTSWHLQAYIAKMGMDGSNFTRILNWNDGIAWPNALSIDYFTDRIYW 2664
Query: 255 ADSKLDFIDCKSLE 268
AD+ LD+I LE
Sbjct: 2665 ADAHLDYIAYADLE 2678
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 59/317 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHK-FGLCSNTCHP-TPLGALCTCPPGEIL 61
C+ ++VCD DC + +DE A C + G C + CH T G +CTC PG I+
Sbjct: 3240 HCIERSQVCDFSDDCTDASDELGCHHTASCSEQNRGGCQHHCHNLTDGGYICTCYPGYII 3299
Query: 62 SNDSVT-CQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVL------------------ 101
S+D+ C D++EC + CS C N G+Y CSC EG+ L
Sbjct: 3300 SHDNKKRCADVDECLTRQHTCSHQCHNLNGTYSCSCREGFRLADGASGVCRAEKEDVVLV 3359
Query: 102 ----------------EYD----NHTCKAINHSAAFLII--------SNRHSILVADLEE 133
E+D +A+++ A II + + S +V ++
Sbjct: 3360 FANGQEIRGLDLQKREEFDVIAAEKRIEALDYDAQQQIIFWADSYDKTIKRSYMVNAIDG 3419
Query: 134 KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD------SRLNRIEVCDENGTNRIVLA 187
+ K AQD+ + G +A DW+ ++YW + R+ V +G R +
Sbjct: 3420 RAKIGFAQDLNMKGGSKPTAVAVDWLASNLYWTEMDRTGSKPRGRVMVAKTDGRYRRSIV 3479
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P + ++P G ++W+D G P+IE MDGS R +I+ +I P GLT+D
Sbjct: 3480 NAGLEVPTSIAVNPQLGR--IYWSDAGSAPKIEVSWMDGSKRRPLITEQIRHPAGLTIDY 3537
Query: 248 ATRR-VYFADSKLDFID 263
+ +Y+ D+KL+ I+
Sbjct: 3538 SQDHIIYWVDTKLNAIE 3554
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 96/184 (52%), Gaps = 20/184 (10%)
Query: 141 QDIVVSGL--DLVEGLAYDWIGGHIYWLD--SRLNRIEVCDENGTNRIVLAKDNITQPRG 196
Q +V G+ + + GL DW+ G++Y+ + N +EV +G+NR VL K PR
Sbjct: 1406 QHVVKDGIGSNGIRGLTIDWVAGNMYFTNVYPHENYVEVSWLDGSNRKVLVKTTNDAPRE 1465
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ +DP R L+W D+G++PRI + +DGS + ++++ I P LT+D+ T +Y+ D
Sbjct: 1466 LAVDPI--KRLLYWIDYGQHPRIGKALLDGSKWTPLVTSGISLPRDLTIDMQTHDIYWVD 1523
Query: 257 SKLDFIDCKSL----------EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
SKLD I S ++ + + + +YW+D + + KA+ +N
Sbjct: 1524 SKLDTIQKISYSGANRKVIRRDLPSPMGIAVYLNDVYWVDRN----LMTVFKASKHNTND 1579
Query: 307 SILV 310
S++
Sbjct: 1580 SVVT 1583
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EG+AYDW IYW DS N I + +GT +++A+ + +PR ++LDP GT LF+T
Sbjct: 1740 EGIAYDWTQHKIYWTDSSNNSIYAMNLDGTELVMIAR--VERPRAIVLDPCNGT--LFFT 1795
Query: 212 DWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
DWG + +I R M GS + I+ + P+GL +D RR+Y+ D+ + I+ LE
Sbjct: 1796 DWGRFGTSGKIFRTTMAGSLKRAIVDKDLSQPSGLAIDYDERRLYWTDAVREKIERSDLE 1855
Query: 269 IK--------TNVNYS-TIFRK-LYWIDEGGNGV 292
+ T ++ T+FR +YW D GV
Sbjct: 1856 GRNRELLVAATIYPFAITVFRNYIYWTDLQLRGV 1889
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 72/127 (56%), Gaps = 4/127 (3%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDP 201
++ S + VEGLA DW ++Y++DSR + V N T+R L K N+ +PR +++ P
Sbjct: 25 VLASQNEGVEGLAVDWASKNLYYIDSRKGTLNVLSTRNVTHRRTLLK-NLKRPRAIVVHP 83
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
+ G ++F+++W I R DG+ + + WPNGL++D RVY+ D+ LD
Sbjct: 84 NRG--FIFFSEWDRPANITRANTDGTGLLVFKNVTLGWPNGLSIDFKEDRVYWCDALLDH 141
Query: 262 IDCKSLE 268
+ +L+
Sbjct: 142 VQHANLD 148
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 28/164 (17%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRW 337
+ RKLYW+D + + + +DG+ L SG + + A+ + G+ Y
Sbjct: 2570 VGRKLYWLDRHSKNLDV----SELDGTKRKTLRSG-VVDPRAIVVHPGIGY--------- 2615
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
L++T W I ++GMDGSN + I++ I WPN L++D T R+Y+AD+ LD+I +
Sbjct: 2616 LYFTSWHLQAYIAKMGMDGSNFTRILNWNDGIAWPNALSIDYFTDRIYWADAHLDYIAYA 2675
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYS 439
+ +G R V L G+ AL L + +Y+S
Sbjct: 2676 DLEGRHRHTV------------LSGNRVPHVFALSLFDDFIYWS 2707
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 136/333 (40%), Gaps = 66/333 (19%)
Query: 91 YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLD 149
Y C C G+ L D + I FL++ I+ DL G D RA + V G+
Sbjct: 993 YSCKCKPGFQLLSDG---RCIEEENPFLMVVKGTQIV--DLPLNGGDARAGALAPVIGIQ 1047
Query: 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCD------ENGTNRIVLAKDN--ITQPRGMMLDP 201
GL +D +G +YW+ R + E C G + L DN + P + D
Sbjct: 1048 SNTGLDFDRMGETLYWVHGREDDDENCTIYTTPYGGGNKTLFLGADNGIVGAPYTIAFD- 1106
Query: 202 SPGTRWLFWTDWGEN---PRIERIGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADS 257
WL + N IE + +DG + TII +PN ++
Sbjct: 1107 -----WLGRNLYIGNRVASNIEAVRVDGKQKYRTIILANDGYPNSVS------------- 1148
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY-E 316
+ +I + + +F WID G VP+KIG+ +M+G NA +L + E
Sbjct: 1149 -------RPKQIVLDPSEGKLF----WIDNGVLEVPVKIGRVDMNGQNAQLLFQDLTHPE 1197
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 376
++A+D++ MLYYS+ P I + +G + + I++ +L
Sbjct: 1198 SIAVDIDKKMLYYSS------------SNPPVIGSMDYNGEDHTIIMTDGHPIAKPRSLG 1245
Query: 377 IATRRVYFAD---SKLDFIDFCNYDGTGRQQVI 406
I R+Y+ D K+ +D N G R+ ++
Sbjct: 1246 ILDHRLYYLDPVYEKIVRVDLPN--GDNRKTIV 1276
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 142/354 (40%), Gaps = 60/354 (16%)
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
A++ L S+ + ++ ++ G+DH I+ G + + + + +Y+LD
Sbjct: 1200 AVDIDKKMLYYSSSNPPVIGSMDYNGEDHTI--IMTDGHPIAKPRSLGILDHRLYYLDPV 1257
Query: 170 LNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+I D NG NR + DN R MM+ T + N + + + G
Sbjct: 1258 YEKIVRVDLPNGDNRKTIV-DNEPDLRSMMIYKKRAT--MQHPCQTNNGGCKHLCIPGPA 1314
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN------------VNYS 276
+ + I + ++ + + S+LD I SL + ++
Sbjct: 1315 ATRTCACGIGYRKENEINCVAYKTFAVVSQLDMIRGYSLSDSSEAMVPVSGPGHHILHVD 1374
Query: 277 TIFRK--LYWIDEGGNGVPLKIGKANMDGSNASILVSGQL----YEALALDLENGMLYYS 330
++R+ +YW E G I ++ +G++ +V + L +D G +Y++
Sbjct: 1375 VMYREQWIYWA-EFNRGYWNGIFRSRPNGTDLQHVVKDGIGSNGIRGLTIDWVAGNMYFT 1433
Query: 331 TL----------------------------------KCTRWLFWTDWGENPRIERIGMDG 356
+ R L+W D+G++PRI + +DG
Sbjct: 1434 NVYPHENYVEVSWLDGSNRKVLVKTTNDAPRELAVDPIKRLLYWIDYGQHPRIGKALLDG 1493
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
S + ++++ I P LT+D+ T +Y+ DSKLD I +Y G R +VI DL
Sbjct: 1494 SKWTPLVTSGISLPRDLTIDMQTHDIYWVDSKLDTIQKISYSGANR-KVIRRDL 1546
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 12/134 (8%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL 332
+ Y K+YW D N I N+DG+ ++ + A+ LD NG L+++
Sbjct: 1742 IAYDWTQHKIYWTDSSNN----SIYAMNLDGTELVMIARVERPRAIVLDPCNGTLFFTD- 1796
Query: 333 KCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
W +G + +I R M GS + I+ + P+GL +D RR+Y+ D+ + I
Sbjct: 1797 -------WGRFGTSGKIFRTTMAGSLKRAIVDKDLSQPSGLAIDYDERRLYWTDAVREKI 1849
Query: 393 DFCNYDGTGRQQVI 406
+ + +G R+ ++
Sbjct: 1850 ERSDLEGRNRELLV 1863
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 75/187 (40%), Gaps = 43/187 (22%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
I R+ +G+ R +++++ GL +D A++ +Y+ DS+ ++ L + + T+
Sbjct: 12 IYRVHRNGTGREIVLASQNEGVEGLAVDWASKNLYYIDSRKGTLN--VLSTRNVTHRRTL 69
Query: 279 FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWL 338
+ L + A+ + G +++S
Sbjct: 70 LKNL------------------------------KRPRAIVVHPNRGFIFFS-------- 91
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
+W I R DG+ + + WPNGL++D RVY+ D+ LD + N D
Sbjct: 92 ---EWDRPANITRANTDGTGLLVFKNVTLGWPNGLSIDFKEDRVYWCDALLDHVQHANLD 148
Query: 399 GTGRQQV 405
GT + V
Sbjct: 149 GTDIKTV 155
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 130/341 (38%), Gaps = 78/341 (22%)
Query: 70 DMNECEQ--PGYCSQMC--------TNTKG-SYICSCNEGYVLEYDNHTCKAINHSAAFL 118
D N C G C Q+C +T G ++ C C G L D C+++N +L
Sbjct: 1607 DTNPCAHLGNGGCDQLCFSFPPDSGASTGGRNFRCECATGK-LGADERKCESVNE---YL 1662
Query: 119 IISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-NRIEVCD 177
+ + R I +L+ + ++ L V GL +D+ + + R +I
Sbjct: 1663 VFATRTEIRAVNLDPHSTE--VPFTPLTNLTNVVGLDFDFADNRMLYTQIRPWAKIAYTK 1720
Query: 178 ENGTNR--IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST 235
N + I + + P G+ D + ++WTD N I + +DG+ ++
Sbjct: 1721 ANKPSHSDITVVLNKGINPEGIAYDWT--QHKIYWTD-SSNNSIYAMNLDGT--ELVMIA 1775
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
++ P + LD ++F D W G G K
Sbjct: 1776 RVERPRAIVLDPCNGTLFFTD---------------------------W---GRFGTSGK 1805
Query: 296 IGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
I + M GS +V L + LA+D + R L+WTD +IER
Sbjct: 1806 IFRTTMAGSLKRAIVDKDLSQPSGLAIDYDE-----------RRLYWTD-AVREKIERSD 1853
Query: 354 MDGSNRSTIISTKIYWPNGLTL--------DIATRRVYFAD 386
++G NR +++ IY P +T+ D+ R VY A+
Sbjct: 1854 LEGRNRELLVAATIY-PFAITVFRNYIYWTDLQLRGVYRAE 1893
>gi|147906208|ref|NP_001079233.1| low density lipoprotein receptor-related protein 6 precursor
[Xenopus laevis]
gi|22854904|gb|AAN09807.1| lipoprotein receptor-related protein 6 [Xenopus laevis]
Length = 1613
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 124/241 (51%), Gaps = 54/241 (22%)
Query: 110 AINHSAAFLIISNRHSILVADLEEKG-------KDHRAQDIVVSGLDLVEGLAYDWIGGH 162
+ +AA + +R I +D+ E+ K +QD+V+ GL +GLA DW+G
Sbjct: 49 GLEDAAAVDFVFSRGLIYWSDVSEEAIKRIDFNKTGSSQDVVIGGLVSPDGLACDWLGEK 108
Query: 163 IYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI 222
+YW DS NRIEV + +G+ R V+ + QPR + LDP+ G +++WTDWGE P+IER
Sbjct: 109 LYWTDSETNRIEVSNLDGSLRKVIFWQELDQPRAIALDPTRG--YMYWTDWGEVPKIERA 166
Query: 223 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
GMDGS RS I+ + IYWPNGLTLD +++Y+AD+KL FI
Sbjct: 167 GMDGSVRSVIVDSDIYWPNGLTLDYDEQKLYWADAKLSFIH------------------- 207
Query: 283 YWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD 342
KANMDGS+ ++ G L AL L +Y WTD
Sbjct: 208 ---------------KANMDGSHRQTVIKGSLAHPFALTLFGDTIY-----------WTD 241
Query: 343 W 343
W
Sbjct: 242 W 242
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 143/335 (42%), Gaps = 55/335 (16%)
Query: 33 CKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C G CS+ C +P+ C CP G L D C M+ + + + S
Sbjct: 286 CAAHNGGCSHLCLMSPMEPFYQCACPTGVRLMEDGKKC--MHGATELLLLVRRTDLRRIS 343
Query: 91 YICSCNEGYVLEYDN--HTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGL 148
VL D+ HT AI++ I + A + +Q IV S +
Sbjct: 344 LDTPDFTDIVLPLDDIRHTI-AIDYDPVEGYIYWTDDEVRAIRRTQIDGSSSQYIVTSQV 402
Query: 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
+G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++LDP G ++
Sbjct: 403 AHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPING--YM 460
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
+WTDWGE P+IE MDGS+R +++T + WPNGL LD ++Y+ D+K D
Sbjct: 461 YWTDWGEIPKIECAAMDGSDRIILVNTSLGWPNGLALDYTEGKIYWGDAKTD-------- 512
Query: 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLY 328
KI +DG+ +LV +L L +Y
Sbjct: 513 --------------------------KIEVMAIDGTGRRVLVEDKLPHIFGFTLLGDYVY 546
Query: 329 YSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ R II
Sbjct: 547 -----------WTDW-QRRSIERVHKRTGEREVII 569
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 119/242 (49%), Gaps = 20/242 (8%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTC---QDMNECEQPGYCSQMCTNTKG 89
C G CS+ C P G C CP G L ND TC + + ++ T
Sbjct: 592 CAENNGGCSHLCLYRPQGPRCACPIGLELINDMKTCIVPEAFLLFSRRADIRRISLETSN 651
Query: 90 SYIC----SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVV 145
+++ E L++D + + + + +I A + H +V
Sbjct: 652 THVAIPLTGVKEASALDFD------VTDNRIYWTDVSLKTISRAFMNGSALRH----VVQ 701
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
GLD EG+A DW+G ++YW D+ NRIEV +G +R +L ++ PR + LDP+ G
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQILVWKDLDSPRALALDPAEG- 760
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+++WT+WG P+I+R MDGS R T++ + NGLT+D A RR+Y+ D + I+
Sbjct: 761 -FMYWTEWGGKPKIDRTAMDGSGRITLVP-DVGRANGLTIDYAERRLYWTDLDTNLIESS 818
Query: 266 SL 267
++
Sbjct: 819 NM 820
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 83/143 (58%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS ++ +L + A+ALD G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVIFWQELDQPRAIALDPTRGYMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS RS I+ + IYWPNGLTLD +++Y+AD+KL FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSVRSVIVDSDIYWPNGLTLDYDEQKLYWADAKLSFIHKANMD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
G+ RQ VI L F L GD
Sbjct: 213 GSHRQTVIKGSLAHPFALTLFGD 235
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 123/254 (48%), Gaps = 51/254 (20%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL D+I + DP G +++WTD E I R +DGS+
Sbjct: 339 LRRISLDTPDFTD-IVLPLDDIRHTIAIDYDPVEG--YIYWTD-DEVRAIRRTQIDGSSS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
I+++++ P+G+ +D + R LYW D G
Sbjct: 395 QYIVTSQVAHPDGIAVDW------------------------------VARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
+ +I ++G+ IL+S L E A+ LD NG +Y WTDWGE P
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLDEPRAIVLDPINGYMY-----------WTDWGEIP 469
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+IE MDGS+R +++T + WPNGL LD ++Y+ D+K D I+ DGTGR+ ++
Sbjct: 470 KIECAAMDGSDRIILVNTSLGWPNGLALDYTEGKIYWGDAKTDKIEVMAIDGTGRRVLVE 529
Query: 408 IDLMVEFTNDLMGD 421
L F L+GD
Sbjct: 530 DKLPHIFGFTLLGD 543
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 100/212 (47%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ SN I T + + L D+ R+Y+ D L F++ +L ++
Sbjct: 642 IRRISLETSNTHVAIPLTGVKEASALDFDVTDNRIYWTDVSLKTISRAFMNGSALRHVVQ 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + ILV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQILVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRTAMDGSGRITLVP-DVGRANGLTIDYAERRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLDR-VVIADDLPHPF 836
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 116/283 (40%), Gaps = 79/283 (27%)
Query: 72 NECEQP-GYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI--L 127
NEC G+CS +C T S Y C C + L DN TC A ++FL+ S +++I +
Sbjct: 891 NECASSNGHCSHLCLATPISGYTCGCPVHHSLNTDNKTCSA---PSSFLLFSQKNAINRM 947
Query: 128 VADLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
V D ++ + DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDGQQ------SPDIILPIHNLRNVRAIDYDPLEKQLYWIDSRQN-IRRAQEDGSQSMT 1000
Query: 186 LAKDNIT-------------------------------------------------QPRG 196
+ I +PR
Sbjct: 1001 IVASTIPNQNMDMQPYDLSIDIYSRLIYWTCEATNIINVTRLDGRAIGVVLKGEQERPRA 1060
Query: 197 MMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
++++P G ++++T+ E +P+IER +DGS R + T + P L LD ++++A
Sbjct: 1061 ILVNPERG--YMYFTNLQERSPKIERAALDGSEREVLFFTGLSKPVALALDNKMGKLFWA 1118
Query: 256 DSKLDFIDCKSLE-----------IKTNVNYSTIFRKLYWIDE 287
DS L I+ L + V + LYWID
Sbjct: 1119 DSDLRRIESSDLSGGHRIVLEDSNVLQPVGLTVFGNYLYWIDR 1161
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 130/323 (40%), Gaps = 36/323 (11%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G +R+V+A D+
Sbjct: 773 IDRTAMDGSGRITLVPDVGRANGLTIDYAERRLYWTDLDTNLIESSNMLGLDRVVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER +I + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRIMIQNDLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYW---IDEGGNGVPLKIGKANMDGSNAS 307
+ + + C L + T ++ T ++ D P + +
Sbjct: 887 QAGWNECASSNGHCSHLCLATPISGYTCGCPVHHSLNTDNKTCSAPSSFLLFSQKNAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ GQ + L + N + Y L+ + L+W D +N I R DGS TI+
Sbjct: 947 MVIDGQQSPDIILPIHNLRNVRAIDYDPLE--KQLYWIDSRQN--IRRAQEDGSQSMTIV 1002
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
++ I P L++DI +R +Y+ + I+ DG V
Sbjct: 1003 ASTIPNQNMDMQPYDLSIDIYSRLIYWTCEATNIINVTRLDGRAIGVV------------ 1050
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1051 LKGEQERPRAILVNPERGYMYFT 1073
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 116 AFLIISNRHSILVADLEEKG-KDHRA-------QDIVVSGLDLVEGLAYDWIGGHIYWLD 167
A L+ R + +L+E+ K RA + + +GL LA D G ++W D
Sbjct: 1060 AILVNPERGYMYFTNLQERSPKIERAALDGSEREVLFFTGLSKPVALALDNKMGKLFWAD 1119
Query: 168 SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227
S L RIE D +G +RIVL N+ QP G+ + +L+W D + IERI G
Sbjct: 1120 SDLRRIESSDLSGGHRIVLEDSNVLQPVGLTV----FGNYLYWID-RQQQMIERIEKTGR 1174
Query: 228 NRSTIISTKI 237
T I +I
Sbjct: 1175 VGRTKIQARI 1184
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 12/107 (11%)
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
++WTD I R M+GS ++ + +P G+ +D + +Y+AD+ + I+
Sbjct: 676 IYWTDVSLK-TISRAFMNGSALRHVVQFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKL 734
Query: 398 DGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAE 444
DG RQ ++ DL + ALALD G +Y++ G +
Sbjct: 735 DGQHRQILVWKDL-----------DSPRALALDPAEGFMYWTEWGGK 770
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 30/151 (19%)
Query: 296 IGKANMDGSNASILVSGQLYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
+ A M G N++++VSG L +A A+D G++Y W+D E I+RI
Sbjct: 34 VDTAGMKG-NSTVVVSG-LEDAAAVDFVFSRGLIY-----------WSDVSEEA-IKRID 79
Query: 354 MD--GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
+ GS++ +I + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 80 FNKTGSSQDVVIGGLVS-PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVIFWQEL- 137
Query: 412 VEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD G +Y++ G
Sbjct: 138 ----------DQPRAIALDPTRGYMYWTDWG 158
>gi|410925148|ref|XP_003976043.1| PREDICTED: low-density lipoprotein receptor-related protein 5-like
[Takifugu rubripes]
Length = 1646
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 123/245 (50%), Gaps = 48/245 (19%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
Q +VVSGL +GLA DW+G +YW DS NRIEV + +GT+R VL ++ QPR + L
Sbjct: 94 GQTVVVSGLASADGLACDWLGKKLYWTDSETNRIEVSNLDGTSRKVLFWMDLDQPRALAL 153
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
+P+ R+++WTDWGE PRIE GMDGSNR +++ IYWPNGLT+D+ ++Y+AD+KL
Sbjct: 154 NPA--QRYMYWTDWGEKPRIESAGMDGSNRKVLVNQNIYWPNGLTIDLLEHKLYWADAKL 211
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
FI +AN+DGS +V G L A
Sbjct: 212 SFIH----------------------------------RANLDGSAREAVVEGILTHPFA 237
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L L LY WTDW G N I+S I+ P + + +
Sbjct: 238 LTLSGETLY-----------WTDWQTRSIHACNKQKGDNIREILS-GIFSPMDIQVLDPS 285
Query: 380 RRVYF 384
R+ Y
Sbjct: 286 RQPYL 290
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 143/327 (43%), Gaps = 89/327 (27%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKA---------------------INHS 114
G CS +C + + Y C+C G L+ D TCK + S
Sbjct: 299 GNCSHLCLLSPVEPFYSCACPTGVQLKPDGKTCKPGAEHVLLLARRTDLRKISLDLPDFS 358
Query: 115 AAFLIISN-RHSILV-----------ADLEEKGKDHRAQD------IVVSGLDLVEGLAY 156
L++ + RH+I + D E K D +V + L +G+A
Sbjct: 359 DIVLMVDDIRHAIAIDYDPVEGFVYWTDDEIKAIRRAHIDGNTSAMLVATELKHPDGIAV 418
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ ++YW D+ +RIEV NGT+R +L +NI +PR ++LDP G +++WTDWG+
Sbjct: 419 DWVARNLYWTDTGTDRIEVTRLNGTSRKILISENIDEPRAIVLDPVNG--YMYWTDWGQQ 476
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER +DG++R ++ + + WPNGL LD +T ++Y+ D+K D
Sbjct: 477 PKIERANLDGTDRVVLVDSNLGWPNGLALDYSTGKLYWGDAKTD---------------- 520
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
KI ++DG+N L+ L L +Y
Sbjct: 521 ------------------KIEVIDVDGTNRQTLLDDNLPHLFGFTLLGDFIY-------- 554
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ + R TII
Sbjct: 555 ---WTDW-QMRSIERVHKVTAARETII 577
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 82/142 (57%), Gaps = 13/142 (9%)
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLF 339
+KLYW D N +I +N+DG++ +L L + AL L R+++
Sbjct: 115 KKLYWTDSETN----RIEVSNLDGTSRKVLFWMDLDQPRALALNPAQ---------RYMY 161
Query: 340 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
WTDWGE PRIE GMDGSNR +++ IYWPNGLT+D+ ++Y+AD+KL FI N DG
Sbjct: 162 WTDWGEKPRIESAGMDGSNRKVLVNQNIYWPNGLTIDLLEHKLYWADAKLSFIHRANLDG 221
Query: 400 TGRQQVILIDLMVEFTNDLMGD 421
+ R+ V+ L F L G+
Sbjct: 222 SAREAVVEGILTHPFALTLSGE 243
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 137/315 (43%), Gaps = 76/315 (24%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C + + C+C G L D HTC AFL+ +NR SI L G D
Sbjct: 605 GGCSHLCFWCQRAVRCACPMGMELLSDLHTCVV---PEAFLLFTNRDSIRSISLGTHGND 661
Query: 138 ----------------------------------------HRAQDIVVSGLDLVEGLAYD 157
+ ++ GLD EG+A D
Sbjct: 662 VAIPLTGVKEVSALDFDVSERRIYWTDIQAKTITRAYMNGSSVEHVIEYGLDYPEGMAVD 721
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNRIVLA-KD-----NITQPRGMMLDPSPGTRWLFWT 211
W+G +IYW D+ NRIEV +G R VL KD ++ PR + LDP+ G +++WT
Sbjct: 722 WMGRNIYWADTGTNRIEVARLDGRYRQVLVCKDLDNLRSLDNPRSLALDPASG--YMYWT 779
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
+WG PRI R MDG +T++ ++ NGLT+D R+Y+ D I+ +++
Sbjct: 780 EWGGRPRIARAYMDGKTTTTLVD-EVGRANGLTIDYVAHRLYWTDLDTSMIESTNMQ--- 835
Query: 272 NVNYSTIFRKL-------------YWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
+ TI +L YW D + + G N ++++ GQL L
Sbjct: 836 GLQRQTIVEELSHPFGLTQYQDFIYWTDFNLRSIERADKRT---GLNRTVVLQGQL--EL 890
Query: 319 ALDLENGMLYYSTLK 333
LD+ ++++S+ +
Sbjct: 891 MLDI---LVFHSSRQ 902
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 142/318 (44%), Gaps = 41/318 (12%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V S L GLA D+ G +YW D++ ++IEV D +GTNR L DN+ G L
Sbjct: 492 LVDSNLGWPNGLALDYSTGKLYWGDAKTDKIEVIDVDGTNRQTLLDDNLPHLFGFTLLGD 551
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+++WTDW + IER+ + R TII ++ GL T D L+
Sbjct: 552 ----FIYWTDW-QMRSIERVHKVTAARETIID-QLPDLMGLKATNVTETHGTNDCALNNG 605
Query: 263 DCKSL----------------EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
C L E+ ++++ + + + +G G++
Sbjct: 606 GCSHLCFWCQRAVRCACPMGMELLSDLHTCVVPEAFLLFTNRDSIRSISLGT---HGNDV 662
Query: 307 SILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 366
+I ++G + E ALD + R ++WTD + I R M+GS+ +I
Sbjct: 663 AIPLTG-VKEVSALDFD---------VSERRIYWTDI-QAKTITRAYMNGSSVEHVIEYG 711
Query: 367 IYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPA 426
+ +P G+ +D R +Y+AD+ + I+ DG RQ ++ DL ++L + +
Sbjct: 712 LDYPEGMAVDWMGRNIYWADTGTNRIEVARLDGRYRQVLVCKDL-----DNLRSLDNPRS 766
Query: 427 LALDLENGMLYYSTEGAE 444
LALD +G +Y++ G
Sbjct: 767 LALDPASGYMYWTEWGGR 784
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 126/335 (37%), Gaps = 63/335 (18%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G C+ +C T C C Y L D C A +FL+ S + I
Sbjct: 913 GNCAHLCLATPAGAQCCCASHYTLNSDGQNCSA---PTSFLLFSQKSGI-----SRMVPG 964
Query: 138 HRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
+ DI+ + L V ++YD + +YWLD R N I ++GT V N
Sbjct: 965 DPSPDIILPIHVLRNVRAVSYDPVDRLVYWLDGRQN-IRRASDDGTTSSVTVNANSQSAD 1023
Query: 196 GMMLDPS--PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
G + D S P +R ++WT N I M G + ++ P + + +Y
Sbjct: 1024 GQIHDLSLDPYSRHIYWTCETTNT-INIQKMSGQHVGVVLKDDANKPRAIVVSAEKGYMY 1082
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
F +TI + KI A++DG+ L +
Sbjct: 1083 F---------------------TTIQER-----------SAKIEAASLDGTERECLFATG 1110
Query: 314 LYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
L+ ALALD G L FW D + RIE + G+NR + + I P
Sbjct: 1111 LFRPVALALDTAAGKL-----------FWVD-SDLKRIESSDLTGANRIVLQDSSILQPA 1158
Query: 372 GLTLDIATRRVYFADSKLDFIDFCN-YDGTGRQQV 405
GLT + +Y+ D + I+ + G GR ++
Sbjct: 1159 GLT--VLGDHLYWIDRQQQIIERVDKLTGDGRTRI 1191
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 143/330 (43%), Gaps = 40/330 (12%)
Query: 131 LEEKGKDHRAQDIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + ++V+ + GL D + +YW D++L+ I + +G+ R + +
Sbjct: 171 IESAGMDGSNRKVLVNQNIYWPNGLTIDLLEHKLYWADAKLSFIHRANLDGSAREAVVEG 230
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
+T P + L L+WTDW G N I+S I+ P + + +
Sbjct: 231 ILTHPFALTLSGET----LYWTDWQTRSIHACNKQKGDNIREILS-GIFSPMDIQVLDPS 285
Query: 250 RRVYFADSKLDFI-DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI-GKANMDGSNAS 307
R+ Y D +C L + + V + ++ GV LK GK G+
Sbjct: 286 RQPYLQTPCGDNNGNCSHLCLLSPV-------EPFYSCACPTGVQLKPDGKTCKPGAEHV 338
Query: 308 ILVSGQL-YEALALDLENGMLYYSTLKCTR------------WLFWTDWGENPRIERIGM 354
+L++ + ++LDL + + R +++WTD E I R +
Sbjct: 339 LLLARRTDLRKISLDLPDFSDIVLMVDDIRHAIAIDYDPVEGFVYWTD-DEIKAIRRAHI 397
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
DG+ + +++T++ P+G+ +D R +Y+ D+ D I+ +GT R+ ILI ++
Sbjct: 398 DGNTSAMLVATELKHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRK--ILISENIDE 455
Query: 415 TNDLMGDNGVPALALDLENGMLYYSTEGAE 444
A+ LD NG +Y++ G +
Sbjct: 456 PR---------AIVLDPVNGYMYWTDWGQQ 476
>gi|403286603|ref|XP_003934569.1| PREDICTED: low-density lipoprotein receptor-related protein 6
isoform 1 [Saimiri boliviensis boliviensis]
Length = 1613
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 114/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q +VVSG+ +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQRVVVSGILSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDP+ G +++WTDWGE P+IER GMDGS+R I++++IYWPNGLT+D R++
Sbjct: 139 QPRAIALDPTSG--FMYWTDWGEVPKIERAGMDGSSRFIIVNSEIYWPNGLTVDYEERKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 223 SLPHPFALTLFEDTLY-----------WTDW 242
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DWI ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 394 SQFVVTAQIAHPDGVAVDWIARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 454 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKT 511
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 512 D----------------------------------KIEVINTDGTGRRVLVEDKIPHIFG 537
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 538 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREVII 569
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPTSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R I++++IYWPNGLT+D R++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFIIVNSEIYWPNGLTVDYEERKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFLDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D I R LYW D G
Sbjct: 395 QFVVTAQIAHPDGVAVDW------------------------------IARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 472 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVINTDGTGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNKTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIY--SRYIYWTCEAAN-VINVTRLDGRSIGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPIALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER T+I + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTVIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNKTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIYSRYIYWTCEAANVINVTRLDGRSIGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 25/151 (16%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENPRIER 351
L++ A NA+I+V G L +A A+D +G++Y+S + + T++ + ++R
Sbjct: 31 LRLVDATNGKENATIVVGG-LEDAAAVDFVFGHGLIYWSDVS-EEAIKQTEFNKTESVQR 88
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
+ + G I P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 89 VVVSG----------ILSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL- 137
Query: 412 VEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 ----------DQPRAIALDPTSGFMYWTDWG 158
>gi|350584178|ref|XP_003481687.1| PREDICTED: prolow-density lipoprotein receptor-related protein
1-like [Sus scrofa]
Length = 778
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 150/318 (47%), Gaps = 95/318 (29%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ ++++C+G DC +G+DEGP
Sbjct: 54 CILMSRLCNGIQDCADGSDEGP-------------------------------------- 75
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLIIS 121
C+D +EC G CSQ+CTNT GS+ C C EGY+L+ DN +CKA N L+I+
Sbjct: 76 --HCRDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPVLLIA 133
Query: 122 NRHSIL------------------------------------VADLEEKGK--------- 136
N +IL V D + +
Sbjct: 134 NSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDSAAQTQLKCARMPGL 193
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
D +I +S L VE +A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 194 KGFVDEHTINISLS-LHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELY 252
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R V
Sbjct: 253 NPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLV 310
Query: 253 YFADSKLDFIDCKSLEIK 270
Y+AD+ LD+I+ E K
Sbjct: 311 YWADAYLDYIEVVDYEGK 328
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 414 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 472
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 473 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 532
Query: 151 VEGLAYDWIGGHIYWLD---SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 533 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 590
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 591 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 650
Query: 261 FID 263
I+
Sbjct: 651 RIE 653
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 86/152 (56%), Gaps = 19/152 (12%)
Query: 261 FIDCKSLEIKTNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
F+D ++ I ++++ + Y++D+ + +I N +G L+ +L
Sbjct: 196 FVDEHTINISLSLHHVEQMAIDWLTGNFYFVDD----IDDRIFVCNRNGDTCVTLLDLEL 251
Query: 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
Y + L+ M +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+T
Sbjct: 252 YNPKGIALDPAMGK---------VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGIT 302
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
LD+ +R VY+AD+ LD+I+ +Y+G GRQ +I
Sbjct: 303 LDLVSRLVYWADAYLDYIEVVDYEGKGRQTII 334
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 17/121 (14%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 608 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 667
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIER--------IGMDGSNRSTIISTKI 237
+ G+ + +LFWT++ G R+ER + + S R I ++
Sbjct: 668 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLERGTGGAPPIVTLLRSERPPIFEIRM 723
Query: 238 Y 238
Y
Sbjct: 724 Y 724
>gi|403286605|ref|XP_003934570.1| PREDICTED: low-density lipoprotein receptor-related protein 6
isoform 2 [Saimiri boliviensis boliviensis]
Length = 1568
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 114/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q +VVSG+ +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQRVVVSGILSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDP+ G +++WTDWGE P+IER GMDGS+R I++++IYWPNGLT+D R++
Sbjct: 139 QPRAIALDPTSG--FMYWTDWGEVPKIERAGMDGSSRFIIVNSEIYWPNGLTVDYEERKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 223 SLPHPFALTLFEDTLY-----------WTDW 242
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DWI ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 394 SQFVVTAQIAHPDGVAVDWIARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 454 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKT 511
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 512 D----------------------------------KIEVINTDGTGRRVLVEDKIPHIFG 537
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 538 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREVII 569
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPTSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R I++++IYWPNGLT+D R++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFIIVNSEIYWPNGLTVDYEERKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFLDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D I R LYW D G
Sbjct: 395 QFVVTAQIAHPDGVAVDW------------------------------IARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 472 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVINTDGTGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNKTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIY--SRYIYWTCEAAN-VINVTRLDGRSIGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPIALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER T+I + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTVIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNKTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIYSRYIYWTCEAANVINVTRLDGRSIGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 25/151 (16%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENPRIER 351
L++ A NA+I+V G L +A A+D +G++Y+S + + T++ + ++R
Sbjct: 31 LRLVDATNGKENATIVVGG-LEDAAAVDFVFGHGLIYWSDVS-EEAIKQTEFNKTESVQR 88
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
+ + G I P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 89 VVVSG----------ILSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL- 137
Query: 412 VEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 ----------DQPRAIALDPTSGFMYWTDWG 158
>gi|355703149|gb|EHH29640.1| Low-density lipoprotein receptor, partial [Macaca mulatta]
Length = 837
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 153/312 (49%), Gaps = 69/312 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGL-----CSNTCH--PTPLGAL 52
C++L KVC+ DC + +DE P + E C ++G CS + H P +L
Sbjct: 267 ECISLDKVCNMARDCRDWSDE-PIKECGELSPGCLRRYGFWPGSHCSVSSHWGGVPPPSL 325
Query: 53 CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN 112
C P D++EC+ P CSQ+C N +GSY C C EG+ L+ CKA+
Sbjct: 326 FLCLP------------DIDECQDPNTCSQLCVNLEGSYKCQCEEGFQLDPHTKACKAVG 373
Query: 113 HSAAFLIISNRHSI------------LVADLE---------------------------- 132
S A+LI +NRH + L+ +L
Sbjct: 374 -SIAYLIFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMIYSTQ 432
Query: 133 -EKGKDHRAQDIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ + D V+S L +GLA DWI +IYW DS L + V D G R L ++N
Sbjct: 433 LDRAHSVSSYDTVISRDLQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREN 492
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
++PR +++DP G +++WTDWG +I++ G++G + ++++ I WPNG+TLD +
Sbjct: 493 GSKPRAIVVDPVHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIEWPNGITLDFPSG 550
Query: 251 RVYFADSKLDFI 262
R+Y+ DSKL I
Sbjct: 551 RLYWVDSKLHSI 562
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLAKDNITQPRGMMLD 200
+V ++ G+ D+ G +YW+DS+L+ I D NG NR ++ K+ + P + +
Sbjct: 532 LVTENIEWPNGITLDFPSGRLYWVDSKLHSISSIDVNGGNRKTVLEDKERLAHPFSLAIF 591
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 592 EDK----VFWTD 599
>gi|47217043|emb|CAG10095.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1638
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 140/559 (25%), Positives = 212/559 (37%), Gaps = 152/559 (27%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+GK DC + +DEGP CDL C G CS+ C P G +C CPPG L +
Sbjct: 728 CLTPDKICNGKVDCADRSDEGPICDL--CLVARGGCSHQCTVAPGKGVVCFCPPGLHLDS 785
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
+ TC+ ++ C + CSQ+C K + CSC G+ ++ D +C + + AF+I S R
Sbjct: 786 SNKTCEVVDYCSRHLKCSQVCEQYKTTVKCSCYPGWAMDPDGDSCHSTDPFEAFIIFSIR 845
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 846 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNRSLLYWTDVVEDKIYRGRLSESGGVTGIE 905
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGLA DWI G +YW+DS L++IEV NG R L + PR + LDP
Sbjct: 906 VVVQHGLATPEGLAVDWITGKLYWIDSNLDQIEVAKLNGDMRTTLIAGGMEHPRAIALDP 965
Query: 202 SPGTRWLF---------------------------------WTDWGENPRIERIGMDGSN 228
G+ +F WTDW N G N
Sbjct: 966 GQGSDAIFSALYDGSGVIEILRGHEYLSHPFAVSLYGGNVYWTDWRTNTLARANKWTGQN 1025
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFAD-------------------------------- 256
T+I P L + +R+ ++
Sbjct: 1026 -VTVIQKTSAQPFDLQIFHPSRQPQASNPCEKNDGRGPCSHLCLINYNRTASCTCPHLMK 1084
Query: 257 ------SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
S D ++C+SL + + R LYW+ + + + A DGS + ++
Sbjct: 1085 LSPNKQSCFDIVNCRSLAL------DWLSRNLYWLSSENDESQINV--ARFDGSLKTSII 1136
Query: 311 SG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYW 369
G L + G +Y W + I MDGSN S ++
Sbjct: 1137 HGIDKPRCLVVHPARGKIY--------------WTDGNTINMANMDGSN-SKVLHQNQRD 1181
Query: 370 PNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALAL 429
P GL++D A ++Y+ S I+ CN DG+ ++++ DL V AL
Sbjct: 1182 PAGLSIDYAASKLYWISSANGTINRCNLDGSS------LEVLETLKRDL-----VKGTAL 1230
Query: 430 DLENGMLYYSTEGAEFLKT 448
+ G L+++ + + L T
Sbjct: 1231 AVMGGKLWWADDDSGQLGT 1249
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 164/415 (39%), Gaps = 120/415 (28%)
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
G C C G + D +C+D +EC G CSQ C NT GSY CSC EGYVL+ D +C+
Sbjct: 5 GTFCFCGDGFEVGADGTSCKDHDECATYGACSQTCENTHGSYSCSCAEGYVLQPDRTSCR 64
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
A QD V+ +A DW+ G+ Y++D
Sbjct: 65 A-----------------------------RQD--------VDNMAIDWLTGNRYFIDRI 87
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW------------------- 210
++I C++ G + + ++ P+GM LDP G L
Sbjct: 88 TDKIFACNQEGDTCVTVLHLDLQNPKGMALDPLMGIDGLHLLMCFEVSYIYALSVFEDHL 147
Query: 211 ----------TDWGENPRIERIGMD---------GSNRSTIISTKIYWPNGLTLDIATRR 251
+ E RI R + G+++ + K+ P D+
Sbjct: 148 YATHSDPSTGSSSVELIRIHRFNITAEIKTLATLGTSKQLRVYHKLAQPKEPKKDLF--- 204
Query: 252 VYFADSKLDFIDCKSLEIKTN---------------VNYSTIFRKLYWIDEGGNGVPLKI 296
+++ + I + IK++ ++Y+ +Y+ D I
Sbjct: 205 LFYGKGRPGVIRGLDMNIKSSDEHMEPIVDLVNPRAIDYNAELGHIYFADT----TSFLI 260
Query: 297 GKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP------RIE 350
G+ +DG+ ++ + C W++WTDW E+ RIE
Sbjct: 261 GRQKLDGTGRETILKDEF-----------------CVCGSWMYWTDWEEDEVNDSIGRIE 303
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+ MDGSNR +++ + WPNGLTLD +T +Y+ D+ D I+ +GTGR V
Sbjct: 304 KAWMDGSNRRIFVTSNMLWPNGLTLDHSTSTMYWCDAYYDHIERIYLNGTGRTVV 358
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 53/268 (19%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+D++ +G+ VEG+A DWI G++YW D N IE+ NG R V+ + + QPR + +
Sbjct: 1306 EDVITTGISRVEGIAVDWIAGNLYWTDHGFNLIEISRLNGAYRSVVISEGLDQPRAIAVH 1365
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-------------- 246
P G +LFWT+WG+ P I R +DGS++ T++++ + WPNG+++D
Sbjct: 1366 PQKG--FLFWTEWGKIPCIGRSRLDGSDQVTLVNSGVMWPNGISIDYECSALTSTGLTAF 1423
Query: 247 ---------------IATRRVYFADSKLDFID------------CKSLEIKTNVNYSTIF 279
R++++D I +++ + Y +
Sbjct: 1424 FKSIIALAFDYSQTTAGINRIFYSDGHFGNIQMINDDWTGRSVVAENVGSVEGLAYHRAW 1483
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTL-KCTRWL 338
LYW + I + +D S V EA+ E+ + L +C +
Sbjct: 1484 DTLYWT----SSTTGTISRHTLDQSRVGAFVR----EAVVTLSEDDHPHMVALDECQNLM 1535
Query: 339 FWTDWGEN-PRIERIGMDGSNRSTIIST 365
FWT+W E P I + G N II +
Sbjct: 1536 FWTNWNEQRPSIMISTLSGKNMRIIIGS 1563
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 119/291 (40%), Gaps = 80/291 (27%)
Query: 149 DLVEGLAYDWIGGHIYWLDSRLNRI-EVCDENGTNRIVL--AKDNITQPRGMMLDPSPGT 205
DLV+G A +GG ++W D ++ V +G N +L + + + G
Sbjct: 1223 DLVKGTALAVMGGKLWWADDDSGQLGTVTKRDGKNLAILRNKTSGVIHMKVYDREAQKGN 1282
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
++WTD G N RI R D + R +I+T I G+ +D
Sbjct: 1283 DTVYWTDMGLN-RISRAKRDQTWREDVITTGISRVEGIAVDW------------------ 1323
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLE 323
I LYW D G N + + + ++G+ S+++S L + A+A+ +
Sbjct: 1324 ------------IAGNLYWTDHGFNLIEI----SRLNGAYRSVVISEGLDQPRAIAVHPQ 1367
Query: 324 NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD------- 376
G +LFWT+WG+ P I R +DGS++ T++++ + WPNG+++D
Sbjct: 1368 KG-----------FLFWTEWGKIPCIGRSRLDGSDQVTLVNSGVMWPNGISIDYECSALT 1416
Query: 377 ----------------------IATRRVYFADSKLDFIDFCNYDGTGRQQV 405
R++++D I N D TGR V
Sbjct: 1417 STGLTAFFKSIIALAFDYSQTTAGINRIFYSDGHFGNIQMINDDWTGRSVV 1467
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 145/331 (43%), Gaps = 56/331 (16%)
Query: 146 SGLDLV--EGLAYDWIGGHIYWLDSR--LNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
S D+V LA DW+ ++YWL S ++I V +G+ + + I +PR +++ P
Sbjct: 1091 SCFDIVNCRSLALDWLSRNLYWLSSENDESQINVARFDGSLKTSIIH-GIDKPRCLVVHP 1149
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
+ G ++WTD I MDGSN S ++ P GL++D A ++Y+ S
Sbjct: 1150 ARGK--IYWTD---GNTINMANMDGSN-SKVLHQNQRDPAGLSIDYAASKLYWISSANGT 1203
Query: 262 I-----DCKSLEIKTNVN--------YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
I D SLE+ + + + KL+W D+ + + DG N +I
Sbjct: 1204 INRCNLDGSSLEVLETLKRDLVKGTALAVMGGKLWWADDDSGQLGTVTKR---DGKNLAI 1260
Query: 309 L---VSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
L SG ++ + D E K ++WTD G N RI R D + R +I+T
Sbjct: 1261 LRNKTSGVIHMKV-YDRE-------AQKGNDTVYWTDMGLN-RISRAKRDQTWREDVITT 1311
Query: 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVP 425
I G+ +D +Y+ D + I+ +G R VI G +
Sbjct: 1312 GISRVEGIAVDWIAGNLYWTDHGFNLIEISRLNGAYRSVVI-----------SEGLDQPR 1360
Query: 426 ALALDLENGMLYYSTEGAEFLKTPLFCITRN 456
A+A+ + G L+++ E+ K P CI R+
Sbjct: 1361 AIAVHPQKGFLFWT----EWGKIP--CIGRS 1385
>gi|390351903|ref|XP_794505.3| PREDICTED: low-density lipoprotein receptor-related protein 2
[Strongylocentrotus purpuratus]
Length = 1230
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 153/298 (51%), Gaps = 42/298 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ VC+ + DC +G DE C + EC++ C + C T CTC G L+
Sbjct: 457 ECILQELVCNNEVDCSDGLDEYR-CGVNECENNATGCQHDCVNTANSYYCTCDTGFRLNP 515
Query: 64 DSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC +++EC + P CSQ+C NT GSY+C C +GY LE D +CK + +I SN
Sbjct: 516 DRRTCAEIDECSDMPELCSQVCENTIGSYLCKCVDGYTLETDGKSCKHNSGIDPLIIFSN 575
Query: 123 RHSI-----------LVADLEEKGK----DHRAQDIVVSGL------------------- 148
+ + L+AD + D+R + V +
Sbjct: 576 SYYVRSLSLDGRDYNLIADDFQGAVALDFDYRESRLFVLDVFRAHIVRMWMNGTDREVII 635
Query: 149 -DLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
D V EG++ DW+G +YW+DS + +EV + +G+ R L + QPR ++++P G
Sbjct: 636 DDFVNGGEGMSVDWVGRKLYWVDSVNDVMEVAELDGSQRKTLVYTGMDQPRAVVVNPKHG 695
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+++WTDWG + I R+GMDG++++ I K+ +PNGLT+D A R + D+ L+ I
Sbjct: 696 --YVYWTDWGLDAHIGRVGMDGTDKTRIHDNKMVFPNGLTIDYAAERRDWCDAHLNHI 751
>gi|296210950|ref|XP_002752182.1| PREDICTED: low-density lipoprotein receptor-related protein 6
isoform 1 [Callithrix jacchus]
Length = 1613
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 113/211 (53%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q +VVSG+ +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQRVVVSGILSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDP+ G +++WTDWGE P+IER GMDGS+R I+++ IYWPNGLT+D R++
Sbjct: 139 QPRAIALDPTSG--FMYWTDWGEVPKIERAGMDGSSRFIIVNSDIYWPNGLTVDYEERKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 223 SLPHPFALTLFEDTLY-----------WTDW 242
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 140/329 (42%), Gaps = 93/329 (28%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR------------ 123
G CS +C + K Y C+C G L + TCK + + L+++ R
Sbjct: 291 GGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCK--DGATELLLLARRTDLRRISLDTPD 348
Query: 124 ------------HSILV-----------ADLEEKGKDHR------AQDIVVSGLDLVEGL 154
H+I V D E + +Q +V + + +G+
Sbjct: 349 FTDIVLQLEDIRHAIAVDYDPVEGYIYWTDDEVRAIRRSFLDGSGSQFVVTAQIAHPDGV 408
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DWI ++YW D+ +RIEV NGT R +L +++ +PR ++LDP G +++WTDWG
Sbjct: 409 AVDWIARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVG--YMYWTDWG 466
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
E P+IER +DGS+R +++T + WPNGL LD +VY+ D+K D
Sbjct: 467 EIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKVYWGDAKTD-------------- 512
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
KI N DGS +LV ++ L +Y
Sbjct: 513 --------------------KIEVVNTDGSGRRVLVEDKIPHIFGFTLLGDYVY------ 546
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ + R II
Sbjct: 547 -----WTDW-QRRSIERVHKRSAEREVII 569
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 85/143 (59%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPTSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R I+++ IYWPNGLT+D R++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFIIVNSDIYWPNGLTVDYEERKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAVDYDPVEG--YIYWTD-DEVRAIRRSFLDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D I R LYW D G
Sbjct: 395 QFVVTAQIAHPDGVAVDW------------------------------IARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD +VY+ D+K D I+ N DG+GR+ ++
Sbjct: 472 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGKVYWGDAKTDKIEVVNTDGSGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNKTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIY--SRYIYWTCEAAN-VINVTRLDGRSIGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPVALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNKTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIYSRYIYWTCEAANVINVTRLDGRSIGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 25/151 (16%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENPRIER 351
L++ A NA+I+V G L +A A+D +G++Y+S + + T++ + ++R
Sbjct: 31 LRLVDATHGKENATIVVGG-LEDAAAVDFVFGHGLIYWSDVS-EEAIKQTEFNKTESVQR 88
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
+ + G I P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 89 VVVSG----------ILSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL- 137
Query: 412 VEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 ----------DQPRAIALDPTSGFMYWTDWG 158
>gi|17298315|gb|AAL38107.1| candidate tumor suppressor protein [Homo sapiens]
Length = 881
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 150/312 (48%), Gaps = 55/312 (17%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCD--LAECKHKFGLCSNTCHPTPLGALCTCPPGE 59
++CV+L+++C+G DCP+G DEG C L+ C+ C C C C G
Sbjct: 87 TNKCVHLSQLCNGVLDCPDGYDEGVHCQELLSNCQQLN--CQYKCTMVRNSTRCYCEDGF 144
Query: 60 ILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI---NHSAA 116
++ D +C+D +EC G CSQ C NT GSY CSC EGY+++ DN +CKA
Sbjct: 145 EITEDGRSCKDQDECAVYGTCSQTCRNTHGSYTCSCVEGYLMQPDNRSCKAKIEPTDRPP 204
Query: 117 FLIISNRHSI-------------------------------LVADLEEKGKDHRAQDI-- 143
L+I+N +I ++ +E + ++ + I
Sbjct: 205 ILLIANFETIEVFYLNGSKMATLSSVNGNEIHTLDFIYNEDMICWIESRESSNQLKCIQI 264
Query: 144 -------------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ V+ +A DW+ ++Y++D +RI VC+ NG+ + L
Sbjct: 265 TKAGGLTDEWTINILQSFHNVQQMAIDWLTRNLYFVDHVGDRIFVCNSNGSVCVTLIDLE 324
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P+ + +DP G LF+TD+G ++ER MDG NR+ II +K P L LD+ +
Sbjct: 325 LHNPKAIAVDPIAGK--LFFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNK 382
Query: 251 RVYFADSKLDFI 262
VY+ D LD++
Sbjct: 383 LVYWVDLYLDYV 394
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 88/156 (56%), Gaps = 13/156 (8%)
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL-DSRLNRIEV 175
++ ++ S L+ + G + + I+ LD VEG+A DWIG ++YW D I V
Sbjct: 569 YIYFADTTSFLIGRQKIDGTER--ETILKDDLDNVEGIAVDWIGNNLYWTNDGHRKTINV 626
Query: 176 C--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP------RIERIGMDGS 227
++ +R L + ++ PRG+++DP G W++WTDW E+ RIE+ MDG
Sbjct: 627 ARLEKASQSRKTLLEGEMSHPRGIVVDPVNG--WMYWTDWEEDEIDDSVGRIEKAWMDGF 684
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
NR +++K+ WPNGLTLD T +Y+ D+ D I+
Sbjct: 685 NRQIFVTSKMLWPNGLTLDFHTNTLYWCDAYYDHIE 720
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 33/187 (17%)
Query: 240 PNGLTLDIATRRVYFADS--------KLDFIDCKS-----LEIKTNVNYSTIFRKLYWID 286
P L T +YFAD+ K+D + ++ L+ + I LYW +
Sbjct: 558 PRALDFHAETNYIYFADTTSFLIGRQKIDGTERETILKDDLDNVEGIAVDWIGNNLYWTN 617
Query: 287 EGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWG 344
+G + + + + L+ G++ + +D NG W++WTDW
Sbjct: 618 DGHRKT-INVARLEKASQSRKTLLEGEMSHPRGIVVDPVNG-----------WMYWTDWE 665
Query: 345 ENP------RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
E+ RIE+ MDG NR +++K+ WPNGLTLD T +Y+ D+ D I+ +
Sbjct: 666 EDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTNTLYWCDAYYDHIEKVFLN 725
Query: 399 GTGRQQV 405
GT R+ V
Sbjct: 726 GTHRKIV 732
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 67/129 (51%), Gaps = 17/129 (13%)
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTRW 337
R LY++D G+ +I N +GS L+ +L+ +A+A+D G L
Sbjct: 295 RNLYFVDHVGD----RIFVCNSNGSVCVTLIDLELHNPKAIAVDPIAGKL---------- 340
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
F+TD+G ++ER MDG NR+ II +K P L LD+ + VY+ D LD++ +Y
Sbjct: 341 -FFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVGVVDY 399
Query: 398 DGTGRQQVI 406
G R VI
Sbjct: 400 QGKNRHTVI 408
>gi|296210952|ref|XP_002752183.1| PREDICTED: low-density lipoprotein receptor-related protein 6
isoform 2 [Callithrix jacchus]
Length = 1568
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 113/211 (53%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q +VVSG+ +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQRVVVSGILSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDP+ G +++WTDWGE P+IER GMDGS+R I+++ IYWPNGLT+D R++
Sbjct: 139 QPRAIALDPTSG--FMYWTDWGEVPKIERAGMDGSSRFIIVNSDIYWPNGLTVDYEERKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 223 SLPHPFALTLFEDTLY-----------WTDW 242
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DWI ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 394 SQFVVTAQIAHPDGVAVDWIARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD +VY+ D+K
Sbjct: 454 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKVYWGDAKT 511
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DGS +LV ++
Sbjct: 512 D----------------------------------KIEVVNTDGSGRRVLVEDKIPHIFG 537
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 538 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREVII 569
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 85/143 (59%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPTSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R I+++ IYWPNGLT+D R++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFIIVNSDIYWPNGLTVDYEERKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAVDYDPVEG--YIYWTD-DEVRAIRRSFLDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D I R LYW D G
Sbjct: 395 QFVVTAQIAHPDGVAVDW------------------------------IARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD +VY+ D+K D I+ N DG+GR+ ++
Sbjct: 472 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGKVYWGDAKTDKIEVVNTDGSGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNKTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 188 KDNI------TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIY--SRYIYWTCEAAN-VINVTRLDGRSIGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPVALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNKTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIYSRYIYWTCEAANVINVTRLDGRSIGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 25/151 (16%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENPRIER 351
L++ A NA+I+V G L +A A+D +G++Y+S + + T++ + ++R
Sbjct: 31 LRLVDATHGKENATIVVGG-LEDAAAVDFVFGHGLIYWSDVS-EEAIKQTEFNKTESVQR 88
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
+ + G I P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 89 VVVSG----------ILSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL- 137
Query: 412 VEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 ----------DQPRAIALDPTSGFMYWTDWG 158
>gi|326669748|ref|XP_002663079.2| PREDICTED: low-density lipoprotein receptor-related protein 4
[Danio rerio]
Length = 407
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 170/414 (41%), Gaps = 121/414 (29%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEI 60
++ RCV L+ CDG+ DC +G+DE GC+ K
Sbjct: 42 MSGRCVRLSWRCDGEDDCSDGSDE-EGCEKTGSK-------------------------- 74
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA---------- 110
D N G CSQ C ++G C+C+ GY L D TC+
Sbjct: 75 -------SSDENCNVNNGGCSQKCQMSRGLVQCTCHTGYTLTADGKTCRGPEPVLLFANR 127
Query: 111 ------INHSAAF-LIISNRHSILVADLEEKGK------------------DHRAQDIVV 145
+ H + + L++SN + + D + +++V
Sbjct: 128 IDIRQVLPHRSEYTLLLSNLENAIALDFHHSQELVFWSDVTLDRIMRASLNGSNVEEVVS 187
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL+ GLA DWI +YW DS +RIEV + +GT+R VL + +PR + L P G
Sbjct: 188 TGLESPGGLAIDWIHNKLYWTDSGTSRIEVSNLDGTHRKVLLWQRMEKPRAIALHPIEGK 247
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
++WTDWG PRIE MDGSNR I T ++WPNGLT+D A+ R+Y+ D+K I+
Sbjct: 248 --IYWTDWGNMPRIEYANMDGSNRKIIADTHLFWPNGLTIDYASHRMYWVDAKHHVIE-- 303
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
+A++DG N ++S L A+ +
Sbjct: 304 --------------------------------RADLDGKNRKAVISQGLPHPFAITVFED 331
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
LY WTDW G N+ +I K+++P +DI T
Sbjct: 332 SLY-----------WTDWHTKSINSANKFTGKNQE-VIRNKLHFP----MDIHT 369
>gi|197927378|ref|NP_001128156.1| low-density lipoprotein receptor-related protein 6 precursor [Danio
rerio]
gi|170785927|gb|ACB38032.1| low density lipoprotein receptor-related protein 6 [Danio rerio]
Length = 1620
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 112/204 (54%), Gaps = 47/204 (23%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
Q V+SGL +GLA DW+G +YW DS NRIEV + +GT+R VL ++ QPR + L
Sbjct: 88 VQTTVISGLASPDGLACDWMGNKLYWTDSETNRIEVAELDGTHRKVLFWQDLDQPRAIAL 147
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER GMDGS RS I+ T+IYWPNGLTLD +++Y+AD+K
Sbjct: 148 DPGRG--FMYWTDWGEIPKIERAGMDGSLRSVIVETEIYWPNGLTLDYQQQQLYWADAKF 205
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
+ I ++N+DGS+ ++V G L A
Sbjct: 206 NCIH----------------------------------RSNLDGSSREVVVKGSLPHPFA 231
Query: 320 LDLENGMLYYSTLKCTRWLFWTDW 343
L LY T LFWTDW
Sbjct: 232 L-----TLYEDT------LFWTDW 244
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 150/346 (43%), Gaps = 72/346 (20%)
Query: 31 AECKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK 88
+ C + G CS+ C +P C CP G L D +C+D P + T
Sbjct: 287 SPCSVRNGGCSHLCLLSPAKPYYQCACPTGVQLLEDHKSCRDGG----PSQLLLLARRTD 342
Query: 89 GSYICSCNEGY---VLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK--------GKD 137
I + VL+ ++ I H+ A I D E + G D
Sbjct: 343 LRRISLDTPDFTDIVLQAED-----IRHAIAIDYDPVEGHIYWTDDEVRAIRRSLLDGSD 397
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
AQ +V S ++ +G+A DWI ++YW D+ +RIEV NGT R +L +++ +PR +
Sbjct: 398 --AQLVVTSQVNHPDGIAVDWIARNLYWTDTGTDRIEVTRLNGTMRKILISEDLDEPRAI 455
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+LDP G +++WTDWGE P+IER +DGS R +++T + WPNGL LD + R++Y+ D+
Sbjct: 456 VLDPVAG--YMYWTDWGEVPKIERAALDGSQRMVMVNTSLGWPNGLALDYSERKIYWGDA 513
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
K D I+ MDGS +L+ L
Sbjct: 514 KTDVIEV----------------------------------MEMDGSGRRVLLEDNLPHV 539
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 540 FGFTLLGDYIY-----------WTDW-QRRSIERVHKRSTEREVII 573
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 124/252 (49%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G ++WTD E I R +DGS+
Sbjct: 343 LRRISLDTPDFTD-IVLQAEDIRHAIAIDYDPVEGH--IYWTD-DEVRAIRRSLLDGSDA 398
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
++++++ P+G+ +D I R LYW D G
Sbjct: 399 QLVVTSQVNHPDGIAVDW------------------------------IARNLYWTDTGT 428
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ +++WTDWGE P+I
Sbjct: 429 D----RIEVTRLNGTMRKILISEDLDEPRAIVLD---------PVAGYMYWTDWGEVPKI 475
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS R +++T + WPNGL LD + R++Y+ D+K D I+ DG+GR+ ++ +
Sbjct: 476 ERAALDGSQRMVMVNTSLGWPNGLALDYSERKIYWGDAKTDVIEVMEMDGSGRRVLLEDN 535
Query: 410 LMVEFTNDLMGD 421
L F L+GD
Sbjct: 536 LPHVFGFTLLGD 547
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 113/242 (46%), Gaps = 20/242 (8%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTC-------QDMNECEQPGYCSQMCT 85
C G CS+ C P G C CP G L D TC + +
Sbjct: 596 CAWANGGCSHLCLYRPQGVSCACPIGLELMADLSTCIVPEAFLLFSRHTDIRRISLETNN 655
Query: 86 NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVV 145
N + E L++D I + + +I A + +H +V
Sbjct: 656 NNVAIPLTGVKEASALDFD------ITDNRIYWTDITLKTISRAFMNGSSLEH----VVE 705
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
GLD EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G
Sbjct: 706 FGLDYPEGMAVDWLGKNLYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEG- 764
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+++WT+WG P+I+R MDGS R T++ + NGLT+D A RR+Y+ D I+
Sbjct: 765 -FMYWTEWGGRPKIDRAAMDGSGRITLVP-NVGRANGLTIDYAERRLYWTDLDTTLIESS 822
Query: 266 SL 267
++
Sbjct: 823 NM 824
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 81/141 (57%), Gaps = 13/141 (9%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFW 340
KLYW D N +I A +DG++ +L L + A+ L+ G + ++W
Sbjct: 110 KLYWTDSETN----RIEVAELDGTHRKVLFWQDLDQPRAIALDPGRGF---------MYW 156
Query: 341 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
TDWGE P+IER GMDGS RS I+ T+IYWPNGLTLD +++Y+AD+K + I N DG+
Sbjct: 157 TDWGEIPKIERAGMDGSLRSVIVETEIYWPNGLTLDYQQQQLYWADAKFNCIHRSNLDGS 216
Query: 401 GRQQVILIDLMVEFTNDLMGD 421
R+ V+ L F L D
Sbjct: 217 SREVVVKGSLPHPFALTLYED 237
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 102/212 (48%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L DI R+Y+ D L F++ SLE ++
Sbjct: 646 IRRISLETNNNNVAIPLTGVKEASALDFDITDNRIYWTDITLKTISRAFMNGSSLEHVVE 705
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG + +LV L ALALD
Sbjct: 706 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVAKLDGQHRQVLVWKDLDSPRALALDP 761
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R T++ + NGLT+D A RR+
Sbjct: 762 AEGFMY-----------WTEWGGRPKIDRAAMDGSGRITLVP-NVGRANGLTIDYAERRL 809
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D I+ N G R +VI DL F
Sbjct: 810 YWTDLDTTLIESSNMLGLER-EVIADDLPHPF 840
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 126/307 (41%), Gaps = 61/307 (19%)
Query: 78 GYCSQMCTNTKG-SYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G+CS +C S+ C C Y L DN TC A +FL+ S + +I ++E
Sbjct: 902 GHCSHLCLAVPVCSFTCGCPAHYSLNTDNKTCSA---PTSFLLFSQKTAINRMVMDEL-- 956
Query: 137 DHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--- 191
++ DI+ + L V + YD + H+YW+D++ N I E+G + + +
Sbjct: 957 --QSPDIILPIHSLRNVRAIDYDPLDRHLYWIDAKQNVIRRAQEDGNQSVTVVSGAVGGS 1014
Query: 192 ---TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248
QP + +D +R+++WT N I DGS ++ + P + ++
Sbjct: 1015 NLGLQPYDLSIDIY--SRFIYWTSELTN-VINVTRTDGSRVGVVLRGEHDKPRAIAVNPE 1071
Query: 249 TRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308
+YF++ L+ ++ KI + +DG+ +
Sbjct: 1072 RGYMYFSN----------LQERSP----------------------KIERCALDGTEREV 1099
Query: 309 LVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY 368
L L +AL ++N + LFW D RIE + G+NR I + I
Sbjct: 1100 LFFSNLGRPVALAVDNELGK---------LFWVDMDLR-RIESSDLSGANRIVIEDSNIL 1149
Query: 369 WPNGLTL 375
P GLT+
Sbjct: 1150 QPVGLTV 1156
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 69/156 (44%), Gaps = 14/156 (8%)
Query: 85 TNTKGSYICSCNEGYVL--EYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
T T GS + G VL E+D A+N ++ SN +E D ++
Sbjct: 1045 TRTDGSRV-----GVVLRGEHDKPRAIAVNPERGYMYFSNLQE-RSPKIERCALDGTERE 1098
Query: 143 IVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ S L LA D G ++W+D L RIE D +G NRIV+ NI QP G+ +
Sbjct: 1099 VLFFSNLGRPVALAVDNELGKLFWVDMDLRRIESSDLSGANRIVIEDSNILQPVGLTV-- 1156
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+L+W D + IERI T I +I
Sbjct: 1157 --FGNFLYWID-RQQQMIERIHKVTREGRTKIQARI 1189
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 25/152 (16%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
L++ A +NA+ LV G L +A A+D +Y L ++W+D E I+R
Sbjct: 31 LRLVDAAHGRANAT-LVMGGLEDAAAVDY----IYAQGL-----IYWSDVSEE-SIKRTL 79
Query: 354 MDGSNRSTIISTKI---YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+GS S + +T I P+GL D ++Y+ DS+ + I+ DGT R+ + DL
Sbjct: 80 FNGSAPSGVQTTVISGLASPDGLACDWMGNKLYWTDSETNRIEVAELDGTHRKVLFWQDL 139
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD G +Y++ G
Sbjct: 140 -----------DQPRAIALDPGRGFMYWTDWG 160
>gi|297687982|ref|XP_002821476.1| PREDICTED: low-density lipoprotein receptor-related protein 5-like,
partial [Pongo abelii]
Length = 206
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 94/128 (73%), Gaps = 2/128 (1%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + LD
Sbjct: 77 QNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALD 136
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 137 PAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLS 194
Query: 261 FIDCKSLE 268
FI +L+
Sbjct: 195 FIHRANLD 202
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 77/125 (61%), Gaps = 17/125 (13%)
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRW 337
+KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 97 KKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY--------- 143
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI N
Sbjct: 144 --WTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANL 201
Query: 398 DGTGR 402
DG+ R
Sbjct: 202 DGSFR 206
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 306 ASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTI 362
++I+VSG L +A A+D + G +Y WTD E + + G+ +
Sbjct: 32 STIVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAVQNV 79
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 80 VISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------D 128
Query: 423 GVPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 129 QPRAIALDPAHGYMYWTDWG 148
>gi|156341219|ref|XP_001620693.1| hypothetical protein NEMVEDRAFT_v1g5576 [Nematostella vectensis]
gi|156205916|gb|EDO28593.1| predicted protein [Nematostella vectensis]
Length = 236
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 126/234 (53%), Gaps = 47/234 (20%)
Query: 71 MNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
+NECE PG CSQ C NTKGS+ CSC EGYVLE D CKA+ +++ ++R+SI +
Sbjct: 1 INECEIPGMCSQKCYNTKGSFKCSCMEGYVLEPDGRRCKALG-PRPYVLFTDRNSIRL-- 57
Query: 131 LEEKGKDHRA-----QDIVVSGLDLVE--------------------------------- 152
+ GK+++ +D G D+ E
Sbjct: 58 IMTDGKEYKQAVQGLKDARTLGFDVKESMLYWTDKAATAIQKAKMVPDTTIETVHETGLV 117
Query: 153 ---GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
GLA DW+G +YW D N IEV + +G+N + L + +P ++LDP+ G +++
Sbjct: 118 EPAGLAIDWVGRKMYWADPGANTIEVSELDGSNTMTLISSGLDKPSAVVLDPTEG--FIY 175
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLDFI 262
WTDWG+ +IER MDG+ R +IS + + P GL +D +TRR+Y+ DSKLD I
Sbjct: 176 WTDWGDPAKIERASMDGTARKVLISGEHLERPAGLAIDYSTRRLYWIDSKLDVI 229
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 19/171 (11%)
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+ + +YW + I ++ D+ ++ + L + + RK+YW D G N
Sbjct: 82 VKESMLYWTDKAATAIQKAKM-VPDTTIETVHETGLVEPAGLAIDWVGRKMYWADPGANT 140
Query: 292 VPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ + + +DGSN L+S L + A+ LD G +Y WTDWG+ +I
Sbjct: 141 IEV----SELDGSNTMTLISSGLDKPSAVVLDPTEGFIY-----------WTDWGDPAKI 185
Query: 350 ERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
ER MDG+ R +IS + + P GL +D +TRR+Y+ DSKLD I CN +G
Sbjct: 186 ERASMDGTARKVLISGEHLERPAGLAIDYSTRRLYWIDSKLDVIKHCNLNG 236
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 129 ADLEEKGKDHRAQDIVVSG--LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG 180
A +E D A+ +++SG L+ GLA D+ +YW+DS+L+ I+ C+ NG
Sbjct: 183 AKIERASMDGTARKVLISGEHLERPAGLAIDYSTRRLYWIDSKLDVIKHCNLNG 236
>gi|440910163|gb|ELR59989.1| Low-density lipoprotein receptor, partial [Bos grunniens mutus]
Length = 807
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 148/302 (49%), Gaps = 63/302 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 268 ECISLDKVCNSVRDCRDWSDEPLKDCGTNECLDNKGGCSHICNDLKIGYECLCPEGFQLV 327
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
C+D++EC+ P CSQ+C N +GSY C C EG+ LE CKA+ + A+L +N
Sbjct: 328 GKH-RCEDIDECQNPDTCSQLCVNLEGSYKCECEEGFRLEPLTKACKAVG-TIAYLFFTN 385
Query: 123 RHSI------------LVADLE-------------------EKGKDHRAQ---------- 141
RH + L+ +L+ + K + AQ
Sbjct: 386 RHEVRKMTLDRSEYTSLIPNLKNVVALDTEVASNRIYWSDLSQRKIYSAQIDGAPGFSSY 445
Query: 142 -DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++ L +GLA DWI +IYW DS +L + ++PR +++D
Sbjct: 446 DTVIGEDLQAPDGLAVDWIHSNIYWTDS----------------ILGTEEGSKPRAIVVD 489
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG I++ G++G + ++++ I WPNG+TLD++ R+Y+ DSKL
Sbjct: 490 PVHG--FMYWTDWGTPAEIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLH 547
Query: 261 FI 262
I
Sbjct: 548 SI 549
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 168/431 (38%), Gaps = 124/431 (28%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC---DLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
C++ ++ CD + DC + +DE GC L E +KF C GE +
Sbjct: 228 CIHGSRQCDREPDCKDLSDE-LGCVNVTLCEGPNKF----------------KCQSGECI 270
Query: 62 SNDSVT-----CQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDN 105
S D V C+D NEC + G CS +C + K Y C C EG+ L
Sbjct: 271 SLDKVCNSVRDCRDWSDEPLKDCGTNECLDNKGGCSHICNDLKIGYECLCPEGFQL-VGK 329
Query: 106 HTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYW 165
H C+ I+ S L + + ++ + + V +AY +
Sbjct: 330 HRCEDIDECQNPDTCSQLCVNLEGSYKCECEEGFRLEPLTKACKAVGTIAYLFF------ 383
Query: 166 LDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI-GM 224
NR EV R M LD S T + P ++ + +
Sbjct: 384 ----TNRHEV-------------------RKMTLDRSEYTSLI--------PNLKNVVAL 412
Query: 225 DGSNRSTIISTKIYWPNGLTLDIATRRVYFAD-------SKLDFIDCKSLEIKTNVNYST 277
D + + S +IYW D++ R++Y A S D + + L+ +
Sbjct: 413 D----TEVASNRIYWS-----DLSQRKIYSAQIDGAPGFSSYDTVIGEDLQAPDGLAVDW 463
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS--GQLYEALALDLENGMLYYSTLKCT 335
I +YW D SIL + G A+ +D +G +Y
Sbjct: 464 IHSNIYWTD--------------------SILGTEEGSKPRAIVVDPVHGFMY------- 496
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWG I++ G++G + ++++ I WPNG+TLD++ R+Y+ DSKL I
Sbjct: 497 ----WTDWGTPAEIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSI 552
Query: 396 NYDGTGRQQVI 406
+ +G R+ V+
Sbjct: 553 DVNGGNRKTVL 563
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD--NITQPRGMMLD 200
+V + G+ D GG +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 519 LVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSIDVNGGNRKTVLEDKKKLAHPFSLAIF 578
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 579 EDK----VFWTD 586
>gi|426369526|ref|XP_004051738.1| PREDICTED: low-density lipoprotein receptor-related protein 5
[Gorilla gorilla gorilla]
Length = 1665
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 94/128 (73%), Gaps = 2/128 (1%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + LD
Sbjct: 193 QNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALD 252
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 253 PAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLS 310
Query: 261 FIDCKSLE 268
FI +L+
Sbjct: 311 FIHRANLD 318
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 149/348 (42%), Gaps = 71/348 (20%)
Query: 28 CDLAECKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCT 85
C C+ G CS+ C +P C CP G L ++ TC+ E+ ++
Sbjct: 344 CLHTRCEEDNGGCSHLCLLSPREPFYTCACPTGVQLQDNGRTCK--AGAEEVLLLARRTD 401
Query: 86 NTKGSYICSCNEGYVLEYDNHTCKAINHSAA----------FLIISNRHSILVADLEEKG 135
+ S VL+ D+ I H+ A + +I A L+ G
Sbjct: 402 LRRISLDTPDFTDIVLQVDD-----IRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSG 456
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
AQ +V + ++ +G+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR
Sbjct: 457 ----AQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPR 512
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ L P G ++WTDWGENP+IE +DG R +++ + WPNGL LD+ ++Y+
Sbjct: 513 AIALHPVMGL--MYWTDWGENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYWG 570
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+K D KI N+DG+ L+ +L
Sbjct: 571 DAKTD----------------------------------KIEVINVDGTKRRTLLEDKLP 596
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ ++R II
Sbjct: 597 HIFGFTLLGDFIY-----------WTDW-QRRSIERVHKVKASRDVII 632
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 148/349 (42%), Gaps = 95/349 (27%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE 132
E G CS +C + + Y C+C G L+ + TCKA + L+++ R
Sbjct: 351 EDNGGCSHLCLLSPREPFYTCACPTGVQLQDNGRTCKA--GAEEVLLLARR--------- 399
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
+ L RI + + T+ IVL D+I
Sbjct: 400 -----------------------------------TDLRRISLDTPDFTD-IVLQVDDIR 423
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
+ DP G +++WTD E I R +DGS T+++T+I P+G+ +D
Sbjct: 424 HAIAIDYDPLEG--YVYWTD-DEVRAIRRAYLDGSGAQTLVNTEINDPDGIAVDW----- 475
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+ R LYW D G + +I ++G++ ILVS
Sbjct: 476 -------------------------VARNLYWTDTGTD----RIEVTRLNGTSRKILVSE 506
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
L E A+ L M ++WTDWGENP+IE +DG R +++ + WPNG
Sbjct: 507 DLDEPRAIALHPVM---------GLMYWTDWGENPKIECANLDGQERRVLVNASLGWPNG 557
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
L LD+ ++Y+ D+K D I+ N DGT R+ ++ L F L+GD
Sbjct: 558 LALDLQEGKLYWGDAKTDKIEVINVDGTKRRTLLEDKLPHIFGFTLLGD 606
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 137/307 (44%), Gaps = 49/307 (15%)
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI--E 174
L S+R LV G+ I+VSGL+ + + + G +YW D I
Sbjct: 44 LLFASHRDVWLV----HAGRVKLESTIMVSGLENAATVDFQFPKGAVYWTDVSEEAIMQT 99
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR--STI 232
++ G + + P G+ P LF N R R+ G + STI
Sbjct: 100 YLNQRGAAVPNVVISGLVSPDGLASSP----LLLF-----ANRRDVRLVDAGGVKLESTI 150
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL----EIKTNVNYSTIF--------- 279
+ + + + + VY+ D + I L NV S +
Sbjct: 151 VVSGLEDAAAVDFQFSKGAVYWTDVSEEAIKQTYLNQTGAAVQNVVISGLVSPDGLACDW 210
Query: 280 --RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 211 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 259
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 260 ----WTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 315
Query: 396 NYDGTGR 402
N DG+ R
Sbjct: 316 NLDGSFR 322
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 119/247 (48%), Gaps = 30/247 (12%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
C + G CS+ C TP C CP G E+LS DM C P +
Sbjct: 655 CADRNGGCSHLCFFTPHATRCGCPIGLELLS-------DMKTCIVPEAFLVFTSRAAIHR 707
Query: 92 ICSCNEGYVLEYDNHTCK----AINHSAAF-LIISNRHSILVADLEEKGKDH------RA 140
I LE +N+ + ++A +SN H I D+ K
Sbjct: 708 IS-------LETNNNDVAIPLTGVKEASALDFDVSNNH-IYWTDVSLKTISRAFMNGSSV 759
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ +V GLD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR + LD
Sbjct: 760 EHVVEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALD 819
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WT+WG PRI R MDG+N T++ K+ N LT+D A +R+Y+ D +
Sbjct: 820 PTKG--YIYWTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTN 876
Query: 261 FIDCKSL 267
I+ ++
Sbjct: 877 MIESSNM 883
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E ++
Sbjct: 705 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVVE 764
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 765 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 820
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 821 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 868
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ N G+++V++ D
Sbjct: 869 YWTDLDTNMIESSNM--LGQERVVIAD 893
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 138/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C F
Sbjct: 941 DILVFHSSRQDGLNDCMHNNGQCGQLCLAIPGGHRCGCASHYTLDPSSRNCSP---PTTF 997
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+++ GL V+ + YD + IYW+D R N I
Sbjct: 998 LLFSQKSAISRMIPD------DQHSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQN-I 1050
Query: 174 EVCDENGTNRIVL-----AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT VL ++ QP + +D +R LFWT N I + G
Sbjct: 1051 KRAKDDGTQPFVLTSLSQGQNPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLSGEA 1107
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1108 MGVVLHGDRDKPRAIIVNAERGYLYFTNMQ---------------------------DRA 1140
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A +DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1141 A-----KIERAALDGTEREVLFTTGLIRPVALVVDNTLGK---------LFWVD-ADLKR 1185
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT + + +Y+ D + I+
Sbjct: 1186 IESCDLSGANRLTLEDANIVQPLGLT--VLGKHLYWIDRQQQMIE 1228
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N +L +N A +E D ++++ +GL L
Sbjct: 1109 GVVLHGDRDKPRAIIVNAERGYLYFTNMQD-RAAKIERAALDGTEREVLFTTGLIRPVAL 1167
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + + L+W D
Sbjct: 1168 VVDNTLGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPLGLTV----LGKHLYWID-R 1222
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T I ++ G+
Sbjct: 1223 QQQMIERVEKTTGDKRTRIQGRVAHLTGI 1251
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 140/338 (41%), Gaps = 67/338 (19%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ RI+L
Sbjct: 269 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRILLP-- 326
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTKIYW----PNGLT 244
+ +P M+ L W + R E S+ + + ++ P G+
Sbjct: 327 -LQRPSLFMMH-------LGLFTWNCLHTRCEEDNGGCSHLCLLSPREPFYTCACPTGVQ 378
Query: 245 LD--------------IATRRVYFADSKLDFIDCKSLEIKTN-------VNYSTIFRKLY 283
L + RR LD D + ++ + ++Y + +Y
Sbjct: 379 LQDNGRTCKAGAEEVLLLARRTDLRRISLDTPDFTDIVLQVDDIRHAIAIDYDPLEGYVY 438
Query: 284 WIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWT 341
W D+ I +A +DGS A LV+ ++ + +A+D R L+WT
Sbjct: 439 WTDDEVRA----IRRAYLDGSGAQTLVNTEINDPDGIAVDW-----------VARNLYWT 483
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD-SKLDFIDFCNYDGT 400
D G + RIE ++G++R ++S + P + L +Y+ D + I+ N DG
Sbjct: 484 DTGTD-RIEVTRLNGTSRKILVSEDLDEPRAIALHPVMGLMYWTDWGENPKIECANLDGQ 542
Query: 401 GRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYY 438
R+ +L++ + + N LALDL+ G LY+
Sbjct: 543 ERR--VLVNASLGWPN---------GLALDLQEGKLYW 569
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 306 ASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTI 362
++I+VSG L +A A+D + G +Y WTD E + + G+ +
Sbjct: 148 STIVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAVQNV 195
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 196 VISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------D 244
Query: 423 GVPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 245 QPRAIALDPAHGYMYWTDWG 264
>gi|301627062|ref|XP_002942697.1| PREDICTED: low-density lipoprotein receptor-related protein 6-like
[Xenopus (Silurana) tropicalis]
Length = 1574
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 86/222 (38%), Positives = 116/222 (52%), Gaps = 50/222 (22%)
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
+ +I D + G H D+V+SGL +GLA DW+G +YW DS NRIEV + +G+
Sbjct: 33 SEEAIKRIDFNKTGSSH---DVVISGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS 89
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
R VL + QPR + LDP+ G +++WTDWG+ P+IER GMDGS RS II + IYWPN
Sbjct: 90 LRKVLFWQELDQPRAIALDPTRG--YMYWTDWGDVPKIERAGMDGSLRSVIIDSDIYWPN 147
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
GLTLD +++Y+AD+KL FI KAN+
Sbjct: 148 GLTLDYDEQKLYWADAKLSFIH----------------------------------KANL 173
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
DGS+ ++ G L AL L +Y WTDW
Sbjct: 174 DGSHRQTVIKGSLAHPFALTLFGDTIY-----------WTDW 204
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 108/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q IV S + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 356 SQYIVTSQVAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVL 415
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER MDGS+R +++T + WPNGL LD A ++Y+ D+K
Sbjct: 416 DPMNG--YMYWTDWGEIPKIERAAMDGSDRIILVNTSLGWPNGLALDYAEGKIYWGDAKT 473
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI DG+ +LV +L
Sbjct: 474 D----------------------------------KIEVMTTDGTGRRVLVEDKLPHIFG 499
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ R II
Sbjct: 500 FTLLGDYVY-----------WTDW-QRRSIERVHKRTGEREVII 531
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 125/254 (49%), Gaps = 51/254 (20%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL D+I + DP G +++WTD E I R +DGS+
Sbjct: 301 LRRISLDTPDFTD-IVLPLDDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRTQIDGSSS 356
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
I+++++ P+G+ +D + R LYW D G
Sbjct: 357 QYIVTSQVAHPDGIAVDW------------------------------VARNLYWTDTGT 386
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
+ +I ++G+ IL+S L E A+ LD NG +Y WTDWGE P
Sbjct: 387 D----RIEVTRLNGTMRKILISEDLDEPRAIVLDPMNGYMY-----------WTDWGEIP 431
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+IER MDGS+R +++T + WPNGL LD A ++Y+ D+K D I+ DGTGR+ ++
Sbjct: 432 KIERAAMDGSDRIILVNTSLGWPNGLALDYAEGKIYWGDAKTDKIEVMTTDGTGRRVLVE 491
Query: 408 IDLMVEFTNDLMGD 421
L F L+GD
Sbjct: 492 DKLPHIFGFTLLGD 505
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 120/242 (49%), Gaps = 20/242 (8%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTC---QDMNECEQPGYCSQMCTNTKG 89
C G CS+ C P G C CP G L +D TC + + ++ T
Sbjct: 554 CAENNGGCSHLCLFRPQGPRCACPIGLELISDMKTCIVPEAFLLFSRRADIRRISLETSN 613
Query: 90 SYIC----SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVV 145
S++ E L++D + + + + +I A + +H +V
Sbjct: 614 SHVAIPLTGVKEASALDFD------VTDNRIYWTDVSLKTISRAFMNGSALEH----VVQ 663
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
GLD EG+A DW+G ++YW D+ NRIEV +G +R +L ++ PR + LDP+ G
Sbjct: 664 FGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQILVWKDLDSPRALALDPAEG- 722
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+++WT+WG P+I+R MDGS R T++ + NGLT+D A RR+Y+ D + I+
Sbjct: 723 -FMYWTEWGGKPKIDRTAMDGSGRITLVP-DVGRANGLTIDYAERRLYWTDLDTNLIESS 780
Query: 266 SL 267
++
Sbjct: 781 NM 782
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 83/143 (58%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD G +Y
Sbjct: 70 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPTRGYMY---------- 115
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWG+ P+IER GMDGS RS II + IYWPNGLTLD +++Y+AD+KL FI N D
Sbjct: 116 -WTDWGDVPKIERAGMDGSLRSVIIDSDIYWPNGLTLDYDEQKLYWADAKLSFIHKANLD 174
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
G+ RQ VI L F L GD
Sbjct: 175 GSHRQTVIKGSLAHPFALTLFGD 197
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ SN I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 604 IRRISLETSNSHVAIPLTGVKEASALDFDVTDNRIYWTDVSLKTISRAFMNGSALEHVVQ 663
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + ILV L ALALD
Sbjct: 664 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQILVWKDLDSPRALALDP 719
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R T++ + NGLT+D A RR+
Sbjct: 720 AEGFMY-----------WTEWGGKPKIDRTAMDGSGRITLVP-DVGRANGLTIDYAERRL 767
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R VI DL F
Sbjct: 768 YWTDLDTNLIESSNMLGLDR-VVIADDLPHPF 798
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 128/319 (40%), Gaps = 77/319 (24%)
Query: 72 NECEQP-GYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C T S Y C C + L DN TC ++FL+ S +++I
Sbjct: 853 NECASSNGHCSHLCLATPVSGYTCGCPVHHSLNADNKTCSP---PSSFLLFSQKNAINRM 909
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI--- 184
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 910 VIDEQ----QSPDIILPIHNLRNVRAIDYDPLEKQLYWIDSRQN-IRRAQEDGSQSMTVV 964
Query: 185 ----------------------------------------------VLAKDNITQPRGMM 198
V+ K +PR ++
Sbjct: 965 ASTVPNQNIDMQPYDLSIDVYSRLIYWTCEATNVINVTRLDGRAIGVVLKGEQDRPRAIL 1024
Query: 199 LDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++P G ++++T+ E +P+IER +DG+ R + T + P L LD ++++ADS
Sbjct: 1025 VNPERG--YMYFTNLQERSPKIERAALDGTEREVLFFTGLSKPVALALDNKMGKLFWADS 1082
Query: 258 KLDFIDCKSLE-----------IKTNVNYSTIFRKLYWIDEGGNGVPL--KIGKANMDGS 304
L I+ L + V + LYWID + K G+
Sbjct: 1083 DLRRIESSDLSGGHRIVLEDSNVLQPVGLTVFGNHLYWIDRQQQMIERIEKTGRVGRTKI 1142
Query: 305 NASILVSGQLYEALALDLE 323
A I + ++ L ++
Sbjct: 1143 QARIPLLTDIHAVTELSMD 1161
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 137/333 (41%), Gaps = 46/333 (13%)
Query: 128 VADLEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL 186
+ +E D + I+V + L GLA D+ G IYW D++ ++IEV +GT R VL
Sbjct: 430 IPKIERAAMDGSDRIILVNTSLGWPNGLALDYAEGKIYWGDAKTDKIEVMTTDGTGRRVL 489
Query: 187 AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST----------- 235
+D + G L +++WTDW + IER+ R II
Sbjct: 490 VEDKLPHIFGFTL----LGDYVYWTDW-QRRSIERVHKRTGEREVIIDQLPDLMGLKATN 544
Query: 236 --KIYWPNGLTLDIA--TRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
K+ NG + + F LE+ +++ + +
Sbjct: 545 IHKMSGTNGCAENNGGCSHLCLFRPQGPRCACPIGLELISDMKTCIVPEAFLLFSRRADI 604
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
+ + +N S+ +I ++G + EA ALD + ++WTD I R
Sbjct: 605 RRISLETSN---SHVAIPLTG-VKEASALDFD---------VTDNRIYWTDVSLK-TISR 650
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
M+GS ++ + +P G+ +D + +Y+AD+ + I+ DG RQ ++ DL
Sbjct: 651 AFMNGSALEHVVQFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQILVWKDL- 709
Query: 412 VEFTNDLMGDNGVPALALDLENGMLYYSTEGAE 444
+ ALALD G +Y++ G +
Sbjct: 710 ----------DSPRALALDPAEGFMYWTEWGGK 732
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 131/323 (40%), Gaps = 36/323 (11%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G +R+V+A D+
Sbjct: 735 IDRTAMDGSGRITLVPDVGRANGLTIDYAERRLYWTDLDTNLIESSNMLGLDRVVIA-DD 793
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW + IER T+I + + + + ++R
Sbjct: 794 LPHPFGL----TQYQDYIYWTDWSQR-SIERANKTSGQNRTMIQNDLDYVMDILVFHSSR 848
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV---PLKIGKANMDGSNAS 307
+ + + C L + T V+ T ++ N P + +
Sbjct: 849 QAGWNECASSNGHCSHLCLATPVSGYTCGCPVHHSLNADNKTCSPPSSFLLFSQKNAINR 908
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + N + Y L+ + L+W D +N I R DGS T++
Sbjct: 909 MVIDEQQSPDIILPIHNLRNVRAIDYDPLE--KQLYWIDSRQN--IRRAQEDGSQSMTVV 964
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
++ + P L++D+ +R +Y+ + I+ DG V
Sbjct: 965 ASTVPNQNIDMQPYDLSIDVYSRLIYWTCEATNVINVTRLDGRAIGVV------------ 1012
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1013 LKGEQDRPRAILVNPERGYMYFT 1035
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 72/140 (51%), Gaps = 25/140 (17%)
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD--GSNRSTI 362
N++++VSG L +A A+D +++ L ++W+D E I+RI + GS+ +
Sbjct: 4 NSTVVVSG-LEDAAAVDF----VFFRGL-----IYWSDVSEEA-IKRIDFNKTGSSHDVV 52
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
IS + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L +
Sbjct: 53 IS-GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL-----------D 100
Query: 423 GVPALALDLENGMLYYSTEG 442
A+ALD G +Y++ G
Sbjct: 101 QPRAIALDPTRGYMYWTDWG 120
>gi|431918959|gb|ELK17826.1| Low-density lipoprotein receptor [Pteropus alecto]
Length = 881
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 140/301 (46%), Gaps = 54/301 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 324 ECIAMDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSHVCNDLKIGYECLCPEGFQLV 383
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
+TC+D+NEC+ P CSQ+C N +GSY C C EG+ L+ + CKA + A+L +N
Sbjct: 384 G-RLTCEDINECQDPDTCSQLCVNLEGSYKCECEEGFQLDPFSKACKATG-TIAYLFFTN 441
Query: 123 RH--------------------SILVADLE---------------------EKGKDHRAQ 141
RH +++ D+E ++
Sbjct: 442 RHEVRKMTLDRSEYTSLLPNLKNVVALDMEVASNRVYWSDLSQRKIYSTQIDRAPSFSYD 501
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
I+ L +GLA DWI +IYW DS L + V D G P M
Sbjct: 502 TIIGEDLQAPDGLAVDWIHSNIYWTDSILGTVSVADTRGAKXXXXXXXPSRGPSCFM--- 558
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
+WTDWG +I++ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL
Sbjct: 559 -------YWTDWGTPAKIKKGGLNGVDVYSLVTEDIQWPNGITLDLSSGRLYWVDSKLHS 611
Query: 262 I 262
I
Sbjct: 612 I 612
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 175/423 (41%), Gaps = 101/423 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C++ ++ CD + DC + +DE ++ C+ PT C GE ++ D
Sbjct: 284 CIHGSQQCDREYDCTDMSDELGCVNVTLCEG----------PTKF----KCHSGECIAMD 329
Query: 65 SVT-----CQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTC 108
V C+D NEC + G CS +C + K Y C C EG+ L TC
Sbjct: 330 KVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSHVCNDLKIGYECLCPEGFQL-VGRLTC 388
Query: 109 KAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS 168
+ IN + S L +LE K + EG D
Sbjct: 389 EDINECQD----PDTCSQLCVNLEGSYK-----------CECEEGFQLDPFS-------- 425
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ C GT +LF+T+ E + ++ +D S
Sbjct: 426 -----KACKATGT-----------------------IAYLFFTNRHE---VRKMTLDRSE 454
Query: 229 RSTIISTKIYWPN-----GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLY 283
++++ PN L +++A+ RVY++D I ++ + +Y TI +
Sbjct: 455 YTSLL------PNLKNVVALDMEVASNRVYWSDLSQRKIYSTQIDRAPSFSYDTIIGEDL 508
Query: 284 WIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
+ +G+ + +N+ ++ SIL + + + S + +++WTDW
Sbjct: 509 ---QAPDGLAVDWIHSNIYWTD-SILGTVSVADTRGAKXXXXXXXPSRGP-SCFMYWTDW 563
Query: 344 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403
G +I++ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL I N +G R+
Sbjct: 564 GTPAKIKKGGLNGVDVYSLVTEDIQWPNGITLDLSSGRLYWVDSKLHSISSINVNGGNRK 623
Query: 404 QVI 406
V+
Sbjct: 624 TVL 626
>gi|16768036|gb|AAL28237.1| GH12891p [Drosophila melanogaster]
Length = 1952
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 197/462 (42%), Gaps = 106/462 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C++ VC+ DC + +DE C++ EC K + C + C T G C C G L
Sbjct: 405 QCIDYNLVCNKYPDCADESDEPAHCNVDECAKVEINQCGHKCVDTLTGYYCDCNEGYKLL 464
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYV-LEYDNHTCKAINHSAAFLII 120
D C D++EC EQPG CSQ C+NT G + C C+E Y + D HTCK + +LI
Sbjct: 465 ADGKACADVDECLEQPGACSQHCSNTPGGFYCKCDETYYERQNDEHTCKRKDKIPPWLIF 524
Query: 121 SNRHSILVADLEEKGKDHRAQDIV-VSGLDL----------------------------- 150
+N++ + ++ + QD++ V LD
Sbjct: 525 TNKYYVRNMSVDGHQYNLMHQDLMNVVALDFDIREEYMYFCDVTAKTIFRAKYGEADDEM 584
Query: 151 --------------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+EG+A DW+G +YWLD ++V + +G+ R L + + PR
Sbjct: 585 PPEREAVIRHDSHGLEGIAIDWVGRKLYWLDRHSKNLDVSELDGSKRKTL-RSGVVDPRA 643
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYF 254
+++ PG +L++T W I ++GMDGSN S I+ + I WPN L++D T R+Y+
Sbjct: 644 IVV--HPGIGYLYFTSWHLQAYIAKMGMDGSNFSRILNWNDGIAWPNALSIDYFTDRIYW 701
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG-Q 313
AD+ LD+ I A+++G + ++SG +
Sbjct: 702 ADAHLDY----------------------------------IAYADLEGRHRHTVLSGSK 727
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
+ AL L + +Y W+DW + G+N T++ + P L
Sbjct: 728 VPHVFALSLFDDYIY-----------WSDWNLKAIVRANKFHGANY-TVLRNTTHRPYDL 775
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFT 415
++ R +L + + C + G + LI E T
Sbjct: 776 HINHPLR-------QLPYTNPCGTNNGGCSHLCLIAPPPEST 810
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 165/429 (38%), Gaps = 104/429 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHP-TPLGALCTCPPGEIL 61
C+ ++VCD DC + +DE + C G C CH T G +CTC PG I+
Sbjct: 1277 HCIERSQVCDFSDDCGDASDELGCHHTSSCSEANRGGCQQHCHNLTDGGYICTCYPGYII 1336
Query: 62 SNDSVT-CQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVL-EYDNHTCKAINHSAAFL 118
+ D+ C D++EC + CS C N G+Y CSC EG+ L + + C+A L
Sbjct: 1337 AADNKKKCSDVDECLTRQHTCSHQCHNLNGTYSCSCREGFHLTDGASGVCRAEKEDVILL 1396
Query: 119 IISN---------------------------------------------RHSILVADLEE 133
++ + S +V ++
Sbjct: 1397 FVNGQEIRGLNWHKSEEFAVIAAEKRIEALDYDAQQQIVFWADSYDKTIKRSYMVNAIDG 1456
Query: 134 KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD------SRLNRIEVCDENGTNRIVLA 187
+ K AQD+ + G +A DW+ ++YW + R+ V +G R +
Sbjct: 1457 RAKIGFAQDLNMKGGSKPTAVAVDWLASNLYWTEMDRTGSKPRGRVMVAKTDGRYRRSIV 1516
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P + ++P G ++W+D G P+IE MDGS R +I+ I P GLT+D
Sbjct: 1517 NAGLEVPTSIAVNPQLGR--IYWSDAGSAPKIEVSWMDGSKRRPLITEMIRHPAGLTIDY 1574
Query: 248 ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307
+ + +YW+D N I DGS
Sbjct: 1575 SQDHI-----------------------------IYWVDTKLNA----IESMRADGSRRK 1601
Query: 308 ILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 366
+V G QL ++LDL +++ T D GE R ++ G ++
Sbjct: 1602 AIVRGDQLRHPVSLDLFESNMFWMT---------RDTGELVRQDKFGR---GVQVVLHRY 1649
Query: 367 IYWPNGLTL 375
I P+GL +
Sbjct: 1650 IVNPSGLKV 1658
>gi|327273405|ref|XP_003221471.1| PREDICTED: low-density lipoprotein receptor-related protein 6-like
[Anolis carolinensis]
Length = 1601
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 113/211 (53%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++V+SGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 68 EFNKTGNVQNVVISGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 127
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDP+ G +++WTDWGE P+IER GMDGS RS II+ IYWPNGLTLD +++
Sbjct: 128 QPRAIALDPARG--FMYWTDWGEVPKIERAGMDGSTRSIIITADIYWPNGLTLDYEDQKL 185
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI ++N+DG++ ++ G
Sbjct: 186 YWADAKLNFIH----------------------------------RSNLDGTHREAVIKG 211
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 212 SLPHPFALTLFGDTLY-----------WTDW 231
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 142/329 (43%), Gaps = 93/329 (28%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI--------- 126
G CS +C + K SY C+C G L + TCK + + L+++ R +
Sbjct: 280 GGCSHLCLMSPVKPSYQCACPTGVKLLENEKTCK--DGAMELLLLARRTDLRRISLDTPD 337
Query: 127 ---LVADLEE------------------KGKDHRA-----------QDIVVSGLDLVEGL 154
+V LE+ + RA Q +V + + +G+
Sbjct: 338 FTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSASQFVVQAQIAHPDGI 397
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DWI ++YW D+ +RIEV NGT R +L + + +PR ++LDP G +++WTDWG
Sbjct: 398 AVDWIARNLYWTDTGTDRIEVTRLNGTMRKILISEELEEPRAIVLDPMVG--YMYWTDWG 455
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
E P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K D
Sbjct: 456 EIPKIERATLDGSDRVVLVNTSLGWPNGLALDYVEHKIYWGDAKTD-------------- 501
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
KI N DG+N +LV +L L +Y
Sbjct: 502 --------------------KIEVMNADGTNRRVLVEDKLPHIFGFTLLGDYIY------ 535
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ + R II
Sbjct: 536 -----WTDW-QRRSIERVHKRTAEREIII 558
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 84/143 (58%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD G +Y
Sbjct: 97 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPARGFMY---------- 142
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS RS II+ IYWPNGLTLD +++Y+AD+KL+FI N D
Sbjct: 143 -WTDWGEVPKIERAGMDGSTRSIIITADIYWPNGLTLDYEDQKLYWADAKLNFIHRSNLD 201
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT R+ VI L F L GD
Sbjct: 202 GTHREAVIKGSLPHPFALTLFGD 224
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 119/242 (49%), Gaps = 20/242 (8%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTC---QDMNECEQPGYCSQMCTNTKG 89
C G CS+ C P G C CP G L ND TC + + ++ T
Sbjct: 581 CAELNGGCSHLCLYRPQGLRCACPIGLELINDMKTCIVPEAFLLFSRRADIRRISLETNN 640
Query: 90 SYIC----SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVV 145
+ + E L++D + + + + +I A + +H +V
Sbjct: 641 NNVAIPLTGVKEASALDFD------VTDNRIYWTDISLKTISRAFMNGSALEH----VVE 690
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
GLD EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G
Sbjct: 691 FGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG- 749
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+++WT+WG P+I+R MDGS RST++ + NGLT+D RR+Y+ D + I+
Sbjct: 750 -FMYWTEWGGKPKIDRAAMDGSERSTLVP-NVGRANGLTIDYVKRRLYWTDLDTNLIESS 807
Query: 266 SL 267
++
Sbjct: 808 NM 809
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 102/212 (48%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 631 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 690
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 691 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 746
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS RST++ + NGLT+D RR+
Sbjct: 747 AEGFMY-----------WTEWGGKPKIDRAAMDGSERSTLVP-NVGRANGLTIDYVKRRL 794
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R VI DL F
Sbjct: 795 YWTDLDTNLIESSNMLGLDR-DVIADDLPHPF 825
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 133/314 (42%), Gaps = 61/314 (19%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A +FL+ S +++I
Sbjct: 880 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNSDNKTCSA---PTSFLLFSQKNAINRM 936
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 937 VIDEL----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNVIRRSQEDGSQSFTVV 992
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
+ QP + +D +R+++WT N I +DG ++ + P
Sbjct: 993 MSPVPNQNLDIQPYDLSIDIY--SRYIYWTCEANN-VINVTRLDGRPMGVVLKSDQDRPR 1049
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + P KI +A +
Sbjct: 1050 AIVVNPEKGYMYF----------------TNLQERS---------------PPKIERAAL 1078
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L S L + +AL +++ + LFW D + RIE + G+NR
Sbjct: 1079 DGTEREVLFSNGLSKPVALAVDSQLGK---------LFWAD-SDLRRIESSDLSGANRIV 1128
Query: 362 IISTKIYWPNGLTL 375
+ + I P GLT+
Sbjct: 1129 LEDSNILQPIGLTV 1142
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 124/336 (36%), Gaps = 61/336 (18%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D++ +YW D N IE + G +R V+A D+
Sbjct: 762 IDRAAMDGSERSTLVPNVGRANGLTIDYVKRRLYWTDLDTNLIESSNMLGLDRDVIA-DD 820
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 821 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQNHLDYVMDILVFHSSR 875
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN--GVPLKIGKANMDGSNASI 308
+ + + C L + V GG G P N D S
Sbjct: 876 QAGWNECASSNGHCSHLCLAVPV--------------GGFVCGCPAHYS-LNSDNKTCSA 920
Query: 309 LVSGQLYEAL---------ALDLENGMLYYSTLKCTR---------WLFWTDWGENPRIE 350
S L+ L + +L +L+ R L+W D +N I
Sbjct: 921 PTSFLLFSQKNAINRMVIDELQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQN-VIR 979
Query: 351 RIGMDGSNRSTIISTKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
R DGS T++ + + P L++DI +R +Y+ + I+ DG
Sbjct: 980 RSQEDGSQSFTVVMSPVPNQNLDIQPYDLSIDIYSRYIYWTCEANNVINVTRLDGRPMGV 1039
Query: 405 VILIDLMVEFTNDLMGDNGVP-ALALDLENGMLYYS 439
V L D P A+ ++ E G +Y++
Sbjct: 1040 V------------LKSDQDRPRAIVVNPEKGYMYFT 1063
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 23/155 (14%)
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
N L++ A NA+++VSG L +A A+D ++ L ++W+D E
Sbjct: 15 ANRRDLRLVDAAQVNENATVVVSG-LEDAAAVDF----IFIHGL-----IYWSDVSEEA- 63
Query: 349 IERIGMDGS-NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
I+R + + N ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ +
Sbjct: 64 IKRTEFNKTGNVQNVVISGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFW 123
Query: 408 IDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+L + A+ALD G +Y++ G
Sbjct: 124 QEL-----------DQPRAIALDPARGFMYWTDWG 147
>gi|432957122|ref|XP_004085797.1| PREDICTED: low-density lipoprotein receptor-related protein 6-like,
partial [Oryzias latipes]
Length = 279
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 110/200 (55%), Gaps = 47/200 (23%)
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
VV GL +GLA DW+G +YW DS NRIEV + +G+ R VL + QPR + LDP
Sbjct: 88 VVQGLASPDGLACDWLGSKLYWTDSETNRIEVAELDGSLRKVLFWQELDQPRAIALDPER 147
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +++WTDWGE P+IER GMDG+NRS II IYWPNGLTLD + +++Y+AD+K +FI
Sbjct: 148 G--FMYWTDWGEVPKIERAGMDGTNRSMIIHKDIYWPNGLTLDYSQQKLYWADAKFNFIH 205
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
++N+DGS+ ++V +L AL
Sbjct: 206 ----------------------------------RSNLDGSHREVVVKDELPHPFAL--- 228
Query: 324 NGMLYYSTLKCTRWLFWTDW 343
LY ST LFWTDW
Sbjct: 229 --TLYEST------LFWTDW 240
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 82/137 (59%), Gaps = 17/137 (12%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I A +DGS +L +L + A+ALD E G +Y
Sbjct: 106 KLYWTDSETN----RIEVAELDGSLRKVLFWQELDQPRAIALDPERGFMY---------- 151
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDG+NRS II IYWPNGLTLD + +++Y+AD+K +FI N D
Sbjct: 152 -WTDWGEVPKIERAGMDGTNRSMIIHKDIYWPNGLTLDYSQQKLYWADAKFNFIHRSNLD 210
Query: 399 GTGRQQVILIDLMVEFT 415
G+ R+ V+ +L F
Sbjct: 211 GSHREVVVKDELPHPFA 227
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 126/291 (43%), Gaps = 56/291 (19%)
Query: 117 FLIISNRHSI-LVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE- 174
L+ +NR + LV EK D +VV GL+ + Y + G IYW D I+
Sbjct: 19 LLLYANRRDLRLVDTAHEKAND----TVVVGGLEDAAAVDYVYSQGLIYWSDVSEEAIKR 74
Query: 175 -VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
+++G + + + P G+ D G++ L+WTD E RIE +DGS R +
Sbjct: 75 TFFNQSGASPVQTVVQGLASPDGLACD-WLGSK-LYWTD-SETNRIEVAELDGSLRKVLF 131
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
++ P + LD R + +YW D G VP
Sbjct: 132 WQELDQPRAIALD--PERGF----------------------------MYWTDWGE--VP 159
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
KI +A MDG+N S+++ +Y L L+ YS K L+W D N I R
Sbjct: 160 -KIERAGMDGTNRSMIIHKDIYWPNGLTLD-----YSQQK----LYWADAKFN-FIHRSN 208
Query: 354 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
+DGS+R ++ ++ P LTL +T +++ D I C + TGR Q
Sbjct: 209 LDGSHREVVVKDELPHPFALTLYEST--LFWTDWNTHSIHSCTKE-TGRGQ 256
>gi|358415937|ref|XP_001254969.2| PREDICTED: low-density lipoprotein receptor-related protein 4-like,
partial [Bos taurus]
Length = 445
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 94/128 (73%), Gaps = 2/128 (1%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + LD
Sbjct: 248 QNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALD 307
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 308 PAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLS 365
Query: 261 FIDCKSLE 268
FI +L+
Sbjct: 366 FIHRANLD 373
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 80/129 (62%), Gaps = 17/129 (13%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 266 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 314
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 315 ----WTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 370
Query: 396 NYDGTGRQQ 404
N DG+ RQ+
Sbjct: 371 NLDGSFRQK 379
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 26/141 (18%)
Query: 305 NASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRST 361
++I+VSG L +A A+D + G +Y WTD E + + G+
Sbjct: 202 ESTIVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAVQN 249
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++ + + P+GL D +++Y+ DS+ + I+ N +GT R+ V F DL
Sbjct: 250 VVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRK--------VLFWQDL--- 298
Query: 422 NGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 299 DQPRAIALDPAHGYMYWTDWG 319
>gi|348522548|ref|XP_003448786.1| PREDICTED: low-density lipoprotein receptor-related protein 6
isoform 1 [Oreochromis niloticus]
Length = 1616
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 109/202 (53%), Gaps = 47/202 (23%)
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+ VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL + QPR + LDP
Sbjct: 89 ETVVSGLASPDGLACDWLGSKLYWTDSETNRIEVAELDGSLRKVLFWQELDQPRAIALDP 148
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++WTDWGE P+IER GMDG+NRS II +IYWPNGLTLD + +++Y+AD+K F
Sbjct: 149 ERG--FMYWTDWGEIPKIERAGMDGTNRSMIIDKEIYWPNGLTLDYSQQKLYWADAKHSF 206
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I ++N+DGS ++V G+L AL
Sbjct: 207 IH----------------------------------RSNLDGSFREVVVKGELPHPFALT 232
Query: 322 LENGMLYYSTLKCTRWLFWTDW 343
L LFWTDW
Sbjct: 233 LFEDT-----------LFWTDW 243
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 149/341 (43%), Gaps = 67/341 (19%)
Query: 33 CKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C G CS+ C +P+ C CP G L D TC+D + ++ + S
Sbjct: 287 CSLNNGGCSHLCLLSPVRPFYRCACPTGVQLLEDGKTCRD--GATEMLLLARRTDLRRIS 344
Query: 91 YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK--------GKDHRAQD 142
+L+ DN I H+ A + D + K G D AQ
Sbjct: 345 LDMPDFTDIILQVDN-----IRHAIAIDYDPVDGYVYWTDDDVKAIRRSLLDGSD--AQF 397
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V S +D +G+A DWI ++YW D+ +RIEV NGT R +L +++ +PR ++LDP
Sbjct: 398 VVTSQVDHPDGIAVDWIARNLYWTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPV 457
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWG+ P+IER +DG R +++T + WPNGL LD R++Y+ D+K D
Sbjct: 458 AG--YMYWTDWGDVPKIERADLDGMERVVMVNTSLGWPNGLALDYEERKIYWGDAKTD-- 513
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
KI NMDG+ +LV +L L
Sbjct: 514 --------------------------------KIEVMNMDGTGRWVLVEDKLPHIFGFTL 541
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+Y WTDW + IER+ + R II
Sbjct: 542 LGDYIY-----------WTDW-QRRSIERVHKRTAVREFII 570
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 100/189 (52%), Gaps = 21/189 (11%)
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFID--CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
IYW + + A +R +F S ++ L + + KLYW D N
Sbjct: 65 IYWSD--VSEEAIKRTFFNQSGASTVETVVSGLASPDGLACDWLGSKLYWTDSETN---- 118
Query: 295 KIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+I A +DGS +L +L + A+ALD E G +Y WTDWGE P+IER
Sbjct: 119 RIEVAELDGSLRKVLFWQELDQPRAIALDPERGFMY-----------WTDWGEIPKIERA 167
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
GMDG+NRS II +IYWPNGLTLD + +++Y+AD+K FI N DG+ R+ V+ +L
Sbjct: 168 GMDGTNRSMIIDKEIYWPNGLTLDYSQQKLYWADAKHSFIHRSNLDGSFREVVVKGELPH 227
Query: 413 EFTNDLMGD 421
F L D
Sbjct: 228 PFALTLFED 236
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 115/242 (47%), Gaps = 20/242 (8%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTC-------QDMNECEQPGYCSQMCT 85
C G CS+ C P G C CP G L D TC + + +
Sbjct: 593 CADDNGGCSHLCLYKPQGVQCGCPIGLELIADMKTCIVPEAFLLFSRHTDIRRISLETNS 652
Query: 86 NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVV 145
N + E L++D + + + +I A + +H +V
Sbjct: 653 NNVAIPLTGVKEASALDFD------VTDNRIYWTDITLKTISRAFMNGSALEH----VVE 702
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
GLD EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G
Sbjct: 703 FGLDYPEGMAVDWLGKNLYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEG- 761
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+++WT+WG P+I+R MDG+ R T+++ + NGLT+D A RR+Y+ D I+
Sbjct: 762 -YMYWTEWGGKPKIDRAAMDGTGRITLVA-DVGRANGLTIDYAERRLYWTDLDTTLIESS 819
Query: 266 SL 267
++
Sbjct: 820 NM 821
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 115/238 (48%), Gaps = 46/238 (19%)
Query: 184 IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
I+L DNI + DP G +++WTD + I R +DGS+ ++++++ P+G+
Sbjct: 353 IILQVDNIRHAIAIDYDPVDG--YVYWTD-DDVKAIRRSLLDGSDAQFVVTSQVDHPDGI 409
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
+D I R LYW D G + +I ++G
Sbjct: 410 AVDW------------------------------IARNLYWTDTGTD----RIEVTRLNG 435
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+ IL+S L E A+ L+ +++WTDWG+ P+IER +DG R ++
Sbjct: 436 TMRKILISEDLDEPRAIVLD---------PVAGYMYWTDWGDVPKIERADLDGMERVVMV 486
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+T + WPNGL LD R++Y+ D+K D I+ N DGTGR ++ L F L+GD
Sbjct: 487 NTSLGWPNGLALDYEERKIYWGDAKTDKIEVMNMDGTGRWVLVEDKLPHIFGFTLLGD 544
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 102/212 (48%), Gaps = 33/212 (15%)
Query: 219 IERIGMD-GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ SN I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 643 IRRISLETNSNNVAIPLTGVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVE 702
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG + +LV L ALALD
Sbjct: 703 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVAKLDGQHRQVLVWKDLDSPRALALDP 758
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDG+ R T+++ + NGLT+D A RR+
Sbjct: 759 AEGYMY-----------WTEWGGKPKIDRAAMDGTGRITLVA-DVGRANGLTIDYAERRL 806
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D I+ N G R +VI DL F
Sbjct: 807 YWTDLDTTLIESSNMLGLDR-EVIADDLPHPF 837
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 149/348 (42%), Gaps = 61/348 (17%)
Query: 78 GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G+CS +C S++C C + L YDN TC A +FL+ S + +I ++E+
Sbjct: 899 GHCSHLCLAVPVSSFVCGCPAHFSLNYDNKTCSA---PTSFLLFSQKTAINRMVIDEQ-- 953
Query: 137 DHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT-Q 193
++ DI+ + L V + YD + +YW+DS+ N I E+G + + ++
Sbjct: 954 --QSPDIILPIHNLRNVRAIDYDPLDKQLYWIDSKQNVIRRAQEDGNQSMTVVLGSLGGH 1011
Query: 194 PRGMML-DPSPG--TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+G+ L D S +R+++WT N I +DGS ++ + P + ++
Sbjct: 1012 SQGLQLYDLSIDIYSRFIYWTSEVTN-VINVTRIDGSRVGVVLRGEHDKPRAIVVNPERG 1070
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
+YF TN+ + KI +A +DG+ +L
Sbjct: 1071 YMYF----------------TNLMERSP----------------KIERAALDGTEREVLF 1098
Query: 311 SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 370
L + +AL ++N + LFW D + RIE + G+NR I + I P
Sbjct: 1099 FSGLGKPVALAIDNEVGK---------LFWVD-SDLRRIESSDLSGANRIVIADSNILQP 1148
Query: 371 NGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
GLT + +Y+ D + I+ D T R+ I + + +D+
Sbjct: 1149 VGLT--VFGNHLYWIDKQQQMIE--RIDKTTREGRTKIQARIAYLSDI 1192
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 28/158 (17%)
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALD--LENGMLYYSTLKCTRWLFWTDWGEN 346
N L++ A + +NA+++V G L +A A+D G++Y W+D E
Sbjct: 26 ANRRDLRLVDAAHEKANATVVVGG-LEDAAAVDYVFSKGLIY-----------WSDVSEE 73
Query: 347 PRIERIGMDGSNRSTI--ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
I+R + S ST+ + + + P+GL D ++Y+ DS+ + I+ DG+ R+
Sbjct: 74 A-IKRTFFNQSGASTVETVVSGLASPDGLACDWLGSKLYWTDSETNRIEVAELDGSLRKV 132
Query: 405 VILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ +L + A+ALD E G +Y++ G
Sbjct: 133 LFWQEL-----------DQPRAIALDPERGFMYWTDWG 159
>gi|348522550|ref|XP_003448787.1| PREDICTED: low-density lipoprotein receptor-related protein 6
isoform 2 [Oreochromis niloticus]
Length = 1618
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 109/202 (53%), Gaps = 47/202 (23%)
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+ VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL + QPR + LDP
Sbjct: 89 ETVVSGLASPDGLACDWLGSKLYWTDSETNRIEVAELDGSLRKVLFWQELDQPRAIALDP 148
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++WTDWGE P+IER GMDG+NRS II +IYWPNGLTLD + +++Y+AD+K F
Sbjct: 149 ERG--FMYWTDWGEIPKIERAGMDGTNRSMIIDKEIYWPNGLTLDYSQQKLYWADAKHSF 206
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I ++N+DGS ++V G+L AL
Sbjct: 207 IH----------------------------------RSNLDGSFREVVVKGELPHPFALT 232
Query: 322 LENGMLYYSTLKCTRWLFWTDW 343
L LFWTDW
Sbjct: 233 LFEDT-----------LFWTDW 243
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 149/341 (43%), Gaps = 66/341 (19%)
Query: 33 CKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C G CS+ C +P+ C CP G L D TC+D E ++ + S
Sbjct: 288 CSLNNGGCSHLCLLSPVRPFYRCACPTGVQLLEDGKTCRDGGATEML-LLARRTDLRRIS 346
Query: 91 YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK--------GKDHRAQD 142
+L+ DN I H+ A + D + K G D AQ
Sbjct: 347 LDMPDFTDIILQVDN-----IRHAIAIDYDPVDGYVYWTDDDVKAIRRSLLDGSD--AQF 399
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V S +D +G+A DWI ++YW D+ +RIEV NGT R +L +++ +PR ++LDP
Sbjct: 400 VVTSQVDHPDGIAVDWIARNLYWTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPV 459
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWG+ P+IER +DG R +++T + WPNGL LD R++Y+ D+K D
Sbjct: 460 AG--YMYWTDWGDVPKIERADLDGMERVVMVNTSLGWPNGLALDYEERKIYWGDAKTD-- 515
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
KI NMDG+ +LV +L L
Sbjct: 516 --------------------------------KIEVMNMDGTGRWVLVEDKLPHIFGFTL 543
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+Y WTDW + IER+ + R II
Sbjct: 544 LGDYIY-----------WTDW-QRRSIERVHKRTAVREFII 572
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 100/189 (52%), Gaps = 21/189 (11%)
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFID--CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
IYW + + A +R +F S ++ L + + KLYW D N
Sbjct: 65 IYWSD--VSEEAIKRTFFNQSGASTVETVVSGLASPDGLACDWLGSKLYWTDSETN---- 118
Query: 295 KIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+I A +DGS +L +L + A+ALD E G +Y WTDWGE P+IER
Sbjct: 119 RIEVAELDGSLRKVLFWQELDQPRAIALDPERGFMY-----------WTDWGEIPKIERA 167
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
GMDG+NRS II +IYWPNGLTLD + +++Y+AD+K FI N DG+ R+ V+ +L
Sbjct: 168 GMDGTNRSMIIDKEIYWPNGLTLDYSQQKLYWADAKHSFIHRSNLDGSFREVVVKGELPH 227
Query: 413 EFTNDLMGD 421
F L D
Sbjct: 228 PFALTLFED 236
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 115/242 (47%), Gaps = 20/242 (8%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTC-------QDMNECEQPGYCSQMCT 85
C G CS+ C P G C CP G L D TC + + +
Sbjct: 595 CADDNGGCSHLCLYKPQGVQCGCPIGLELIADMKTCIVPEAFLLFSRHTDIRRISLETNS 654
Query: 86 NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVV 145
N + E L++D + + + +I A + +H +V
Sbjct: 655 NNVAIPLTGVKEASALDFD------VTDNRIYWTDITLKTISRAFMNGSALEH----VVE 704
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
GLD EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G
Sbjct: 705 FGLDYPEGMAVDWLGKNLYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEG- 763
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+++WT+WG P+I+R MDG+ R T+++ + NGLT+D A RR+Y+ D I+
Sbjct: 764 -YMYWTEWGGKPKIDRAAMDGTGRITLVA-DVGRANGLTIDYAERRLYWTDLDTTLIESS 821
Query: 266 SL 267
++
Sbjct: 822 NM 823
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 115/238 (48%), Gaps = 46/238 (19%)
Query: 184 IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
I+L DNI + DP G +++WTD + I R +DGS+ ++++++ P+G+
Sbjct: 355 IILQVDNIRHAIAIDYDPVDG--YVYWTD-DDVKAIRRSLLDGSDAQFVVTSQVDHPDGI 411
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
+D I R LYW D G + +I ++G
Sbjct: 412 AVDW------------------------------IARNLYWTDTGTD----RIEVTRLNG 437
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+ IL+S L E A+ L+ +++WTDWG+ P+IER +DG R ++
Sbjct: 438 TMRKILISEDLDEPRAIVLD---------PVAGYMYWTDWGDVPKIERADLDGMERVVMV 488
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+T + WPNGL LD R++Y+ D+K D I+ N DGTGR ++ L F L+GD
Sbjct: 489 NTSLGWPNGLALDYEERKIYWGDAKTDKIEVMNMDGTGRWVLVEDKLPHIFGFTLLGD 546
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 102/212 (48%), Gaps = 33/212 (15%)
Query: 219 IERIGMD-GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ SN I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 645 IRRISLETNSNNVAIPLTGVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVE 704
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG + +LV L ALALD
Sbjct: 705 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVAKLDGQHRQVLVWKDLDSPRALALDP 760
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDG+ R T+++ + NGLT+D A RR+
Sbjct: 761 AEGYMY-----------WTEWGGKPKIDRAAMDGTGRITLVA-DVGRANGLTIDYAERRL 808
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D I+ N G R +VI DL F
Sbjct: 809 YWTDLDTTLIESSNMLGLDR-EVIADDLPHPF 839
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 149/348 (42%), Gaps = 61/348 (17%)
Query: 78 GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G+CS +C S++C C + L YDN TC A +FL+ S + +I ++E+
Sbjct: 901 GHCSHLCLAVPVSSFVCGCPAHFSLNYDNKTCSA---PTSFLLFSQKTAINRMVIDEQ-- 955
Query: 137 DHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT-Q 193
++ DI+ + L V + YD + +YW+DS+ N I E+G + + ++
Sbjct: 956 --QSPDIILPIHNLRNVRAIDYDPLDKQLYWIDSKQNVIRRAQEDGNQSMTVVLGSLGGH 1013
Query: 194 PRGMML-DPSPG--TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+G+ L D S +R+++WT N I +DGS ++ + P + ++
Sbjct: 1014 SQGLQLYDLSIDIYSRFIYWTSEVTN-VINVTRIDGSRVGVVLRGEHDKPRAIVVNPERG 1072
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
+YF TN+ + KI +A +DG+ +L
Sbjct: 1073 YMYF----------------TNLMERSP----------------KIERAALDGTEREVLF 1100
Query: 311 SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 370
L + +AL ++N + LFW D + RIE + G+NR I + I P
Sbjct: 1101 FSGLGKPVALAIDNEVGK---------LFWVD-SDLRRIESSDLSGANRIVIADSNILQP 1150
Query: 371 NGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
GLT + +Y+ D + I+ D T R+ I + + +D+
Sbjct: 1151 VGLT--VFGNHLYWIDKQQQMIE--RIDKTTREGRTKIQARIAYLSDI 1194
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 28/158 (17%)
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALD--LENGMLYYSTLKCTRWLFWTDWGEN 346
N L++ A + +NA+++V G L +A A+D G++Y W+D E
Sbjct: 26 ANRRDLRLVDAAHEKANATVVVGG-LEDAAAVDYVFSKGLIY-----------WSDVSEE 73
Query: 347 PRIERIGMDGSNRSTI--ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
I+R + S ST+ + + + P+GL D ++Y+ DS+ + I+ DG+ R+
Sbjct: 74 A-IKRTFFNQSGASTVETVVSGLASPDGLACDWLGSKLYWTDSETNRIEVAELDGSLRKV 132
Query: 405 VILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ +L + A+ALD E G +Y++ G
Sbjct: 133 LFWQEL-----------DQPRAIALDPERGFMYWTDWG 159
>gi|297691214|ref|XP_002823003.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 6 [Pongo abelii]
Length = 1677
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 113/175 (64%), Gaps = 10/175 (5%)
Query: 110 AINHSAAFLIISNRHSILVADLEEKG-------KDHRAQDIVVSGLDLVEGLAYDWIGGH 162
+ +AA + N I +D+ E+ K Q++VVSGL +GLA DW+G
Sbjct: 42 GLEDAAAVDFVFNHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEK 101
Query: 163 IYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI 222
+YW DS NRIEV + +G+ R VL + QPR + LDPS G +++WTDWGE P+IER
Sbjct: 102 LYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSG--FMYWTDWGEVPKIERA 159
Query: 223 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST 277
GMDGS+R II+++IYWPNGLTLD +++Y+AD+KL+FI +L+ TN N ++
Sbjct: 160 GMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD-GTNRNRTS 213
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 475 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 534
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 535 DPMVG--YMYWTDWGEXPKIERAALDGSDRVVLVNTSLXWPNGLALDYDEGKIYWGDAKT 592
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 593 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 618
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 619 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREVII 650
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 671 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 727
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 728 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 787
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 788 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 845
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 846 TEWGGKPKIDRAAMDGSERTTLVPN-VGRANGLTIDYAKRRLYWTDLDTNLIESSNM 901
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 420 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGS 475
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 476 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 505
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 506 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEXPKI 552
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 553 ERAALDGSDRVVLVNTSLXWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDK 612
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 613 IPHIFGFTLLGD 624
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 80/127 (62%), Gaps = 17/127 (13%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 101 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 146
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++Y+AD+KL+FI N D
Sbjct: 147 -WTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 205
Query: 399 GTGRQQV 405
GT R +
Sbjct: 206 GTNRNRT 212
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 723 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 782
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 783 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 838
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 839 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVPN-VGRANGLTIDYAKRRL 886
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 887 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 917
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + ++
Sbjct: 972 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAVNRM 1028
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 1029 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1084
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1085 VSSVPSQNLEIQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRSVGVVLKGEQDRPR 1141
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1142 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1169
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1170 DGTEREVLFFSGLSKPIALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1219
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1220 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1272
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 854 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 912
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 913 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 967
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 968 QSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAVNR 1027
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 1028 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1084
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1085 VSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSVGVV------------ 1132
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1133 LKGEQDRPRAIVVNPEKGYMYFT 1155
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 27/152 (17%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIER 351
L++ A NA+I+V G L +A A+D +G++Y W+D E I+R
Sbjct: 24 LRLVDATHGKENATIVVGG-LEDAAAVDFVFNHGLIY-----------WSDVSEEA-IKR 70
Query: 352 IGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 71 TEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL 130
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 131 -----------DQPRAIALDPSSGFMYWTDWG 151
>gi|324499441|gb|ADY39759.1| Prolow-density lipoprotein receptor-related protein 1 [Ascaris suum]
Length = 2642
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 175/417 (41%), Gaps = 97/417 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS-N 63
C++ VC+ K DC + +DE C + EC C C P+ C C P ++S +
Sbjct: 801 CIDAALVCNSKNDCGDNSDEPALCRVDECVD--AACEENCVNLPISYRCECTPPRVVSKH 858
Query: 64 DSVTCQDMNECEQPGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D+ +C ++CE CSQ C + + C C+ GY L D TC+ + +++ N
Sbjct: 859 DNRSCILRDQCED-FPCSQHCLSKGDNRFECGCDPGYKLAPDRRTCRHSDSIDPEILLIN 917
Query: 123 RHSILVADLEEKGK---------------------------DHRAQDI------------ 143
RH + + + K H A I
Sbjct: 918 RHYVRLFSVTGTPKGALLSNLSNGVAVDYDIMSQLVYWTDVTHTASSIGYTSLSKQNGTF 977
Query: 144 -VVSGL--DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLAKDNITQPRGMML 199
V++GL +GLA DW+ +IYW D + I V D G R +L D + +PR ++L
Sbjct: 978 KVLTGLFGGSPDGLAVDWLARNIYWCDKDGDSISVADMKGLYRHTILKGDPLQEPRAIVL 1037
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP LFW+DWGE P I R+ MDG+NR II++ + WPN L +D TRRV++ D L
Sbjct: 1038 DPMASV--LFWSDWGERPHIGRMDMDGANRRLIITSSLRWPNALAVDTTTRRVFWGDGHL 1095
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D+ IG ++ DG N +++ +
Sbjct: 1096 DY----------------------------------IGSSDYDGDNRRTVLTKSVKHIFG 1121
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTL 375
L + LY WTDW N +ER + G R+ I++ Y P G+ +
Sbjct: 1122 LAVFEDFLY-----------WTDW-TNRTVERAHKITGEMRTVILNFTHYRPMGVKI 1166
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 180/454 (39%), Gaps = 108/454 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPT--------------- 47
+C+ CDG+ DC +G+DE P CD +C +F S C P
Sbjct: 716 QCIPRRHFCDGENDCDDGSDEPPTCDRRQCTAWQFRCGSGQCIPRNWTCNGIRDCSDGTD 775
Query: 48 PLGALCTCP------------PGEILSNDSVTCQDMNEC----EQPGYC----------S 81
LC+ P + + ++ C N+C ++P C
Sbjct: 776 EAEELCSDPSRGSCGAMMFHCANGVCIDAALVCNSKNDCGDNSDEPALCRVDECVDAACE 835
Query: 82 QMCTNTKGSYICSCNEGYVL-EYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRA 140
+ C N SY C C V+ ++DN +C + F ++H + KG D+R
Sbjct: 836 ENCVNLPISYRCECTPPRVVSKHDNRSCILRDQCEDFPC--SQHCL------SKG-DNRF 886
Query: 141 QDIVVSGLDLVEGLA----YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ G L D I I ++ R+ GT + L N++ G
Sbjct: 887 ECGCDPGYKLAPDRRTCRHSDSIDPEILLINRHYVRLF--SVTGTPKGALLS-NLSN--G 941
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYW--PNGLTLDIATRRVY 253
+ +D ++ ++WTD I + N + + T ++ P+GL +D
Sbjct: 942 VAVDYDIMSQLVYWTDVTHTASSIGYTSLSKQNGTFKVLTGLFGGSPDGLAVDW------ 995
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG-SNASILVSG 312
+ R +YW D+ G+ + + A+M G +IL
Sbjct: 996 ------------------------LARNIYWCDKDGDSISV----ADMKGLYRHTILKGD 1027
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
L E A+ L+ LFW+DWGE P I R+ MDG+NR II++ + WPN
Sbjct: 1028 PLQEPRAIVLDPMASV---------LFWSDWGERPHIGRMDMDGANRRLIITSSLRWPNA 1078
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
L +D TRRV++ D LD+I +YDG R+ V+
Sbjct: 1079 LAVDTTTRRVFWGDGHLDYIGSSDYDGDNRRTVL 1112
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 158/453 (34%), Gaps = 105/453 (23%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+RC CDG +DC + +DE C++ F C T P C
Sbjct: 1619 NRCYPQAGFCDGVSDCEDDSDEKNAFCNKTCRNSF-RCVTTGRCVPYTKQCDGHDDCGDG 1677
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEY-DNHTCKAINHSAAFLIIS 121
+D C N C+Q G CSQ C K C+C GY EY CKA A + +
Sbjct: 1678 SDEFDCDITNLCDQFGTCSQECHPKKPLIKCACAPGYSREYWSRDQCKATGSEPAKVAVV 1737
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
+ + H A + V DL
Sbjct: 1738 DSRI-----MHTFTHSHNASNARVETADL------------------------------- 1761
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW---------------GENPRIERIGMDG 226
R ++ D I + G + DPS FW D + R++R G
Sbjct: 1762 QRTIMDFDYIVE--GDLDDPSKQKTLFFWVDTVHESVQSGTLSNMLKSKPSRVKR----G 1815
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWID 286
S + ++I + + +T+D R VY A S F
Sbjct: 1816 SPQLSMI--RFHRATAVTVDWINRNVYHAHSAFIF------------------------- 1848
Query: 287 EGGNGVPLKIGK-ANMDGSNASI-LVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWG 344
G +G + I + + S AS+ +V G L A+ + R LFW+
Sbjct: 1849 -GIDGTVISITPISEIKNSGASLPVVWGNLLRVTAIVVAPNR---------RRLFWSVQE 1898
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
IE +DGS R T+ IY P+ L++D R+Y++D + ++ G R+
Sbjct: 1899 PYAAIESSNLDGSERHTLALNGIYAPSSLSVDEPNNRLYWSDVEKGTVETITLTGKDRRI 1958
Query: 405 VILIDLMVEFTNDLMGDNGVPALALDLENGMLY 437
V + N ++ D L++D+ MLY
Sbjct: 1959 V----KKYGYQNGILHDR---PLSVDVFEDMLY 1984
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 56/265 (21%)
Query: 32 ECKHKFGLCSNTCHPTPLGAL-CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
+C G C+ C G L C CP G +L+ND C+ N +
Sbjct: 20 KCAENNGGCARLCFFMGAGRLQCACPFG-VLANDGKNCEQHN-----------------T 61
Query: 91 YICSCNEGYVLEYD----------NHTCKAINHSA------AFLIISNRHSILVADLEEK 134
+I + + G +E+ N K I A A + R ++ +D+ K
Sbjct: 62 FI-AFSRGRSIEFTTWIGGRSTTYNAAFKPIQKPALIRNAVALTVDKERSRLIFSDIHLK 120
Query: 135 -----GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL---DSRLNRIEVCD-------EN 179
D + VV + VEGLA+D+ +Y+ + + R+ + + +
Sbjct: 121 RIQSVSYDGSSAITVVGNVGSVEGLAFDFHHRDLYFTSLSEHAIMRVSLAEYDKSAYPKK 180
Query: 180 GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW-GENPRIERIGMDGSNRSTIISTKIY 238
T + L+K + PRG+ +DP T +F+T+W ++P IE+ G R II+ I
Sbjct: 181 PTALLRLSKSD--NPRGIAVDPCLMT--IFFTNWRDDSPSIEKAFFSGYGREKIITEDIR 236
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PN + +D R++Y++D++LD I+
Sbjct: 237 TPNAIAIDFMARKLYWSDARLDKIE 261
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 18/178 (10%)
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN------------YSTIFRKLYWIDEGG 289
LT+D R+ F+D L I S + + + + R LY+
Sbjct: 102 ALTVDKERSRLIFSDIHLKRIQSVSYDGSSAITVVGNVGSVEGLAFDFHHRDLYFTSLSE 161
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDW-GENPR 348
+ + +++ A D S + L L + + C +F+T+W ++P
Sbjct: 162 HAI-MRVSLAEYDKS----AYPKKPTALLRLSKSDNPRGIAVDPCLMTIFFTNWRDDSPS 216
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
IE+ G R II+ I PN + +D R++Y++D++LD I+ C+ +G R+ +I
Sbjct: 217 IEKAFFSGYGREKIITEDIRTPNAIAIDFMARKLYWSDARLDKIERCDLNGKHREVLI 274
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ I+ + +A D++ +YW D+RL++IE CD NG +R VL + N + P G
Sbjct: 228 EKIITEDIRTPNAIAIDFMARKLYWSDARLDKIERCDLNGKHREVLIRGNDSSPMGHPAH 287
Query: 201 P---SPGTRWLFWTDW 213
P S LF+TDW
Sbjct: 288 PFGLSLLGNTLFFTDW 303
>gi|229442315|gb|AAI72897.1| low density lipoprotein-related protein 1B precursor [synthetic
construct]
Length = 1344
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 150/312 (48%), Gaps = 55/312 (17%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCD--LAECKHKFGLCSNTCHPTPLGALCTCPPGE 59
++CV+L+++C+G DCP+G DEG C L+ C+ C C C C G
Sbjct: 87 TNKCVHLSQLCNGVLDCPDGYDEGVHCQELLSNCQQLN--CQYKCTMVRNSTRCYCEDGF 144
Query: 60 ILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI---NHSAA 116
++ D +C+D +EC G CSQ C NT GSY CSC EGY+++ DN +CKA
Sbjct: 145 EITEDGRSCKDQDECAVYGTCSQTCRNTHGSYTCSCVEGYLMQPDNRSCKAKIEPTDRPP 204
Query: 117 FLIISNRHSI-------------------------------LVADLEEKGKDHRAQDI-- 143
L+I+N +I ++ +E + ++ + I
Sbjct: 205 ILLIANFETIEVFYLNGSKMATLSSVNGNEIHTLDFIYNEDMICWIESRESSNQLKCIQI 264
Query: 144 -------------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ V+ +A DW+ ++Y++D +RI VC+ NG+ + L
Sbjct: 265 TKAGGLTDEWTINILQSFHNVQQMAIDWLTRNLYFVDHVGDRIFVCNSNGSVCVTLIDLE 324
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P+ + +DP G LF+TD+G ++ER MDG NR+ II +K P L LD+ +
Sbjct: 325 LHNPKAIAVDPIAGK--LFFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNK 382
Query: 251 RVYFADSKLDFI 262
VY+ D LD++
Sbjct: 383 LVYWVDLYLDYV 394
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 107/201 (53%), Gaps = 12/201 (5%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+GK DCP+G+DEG CD EC G CSN C P G +C+CP G L+
Sbjct: 1150 CLQPEKLCNGKKDCPDGSDEGYLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLNK 1207
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC EG+ L+ D +C +++ AF+I S R
Sbjct: 1208 DNKTCEIVDYCSNHLKCSQVCEQHKHTVKCSCYEGWKLDVDGESCTSVDPFEAFIIFSIR 1267
Query: 124 HSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD---SRLNRIEVCDENG 180
H I DL + R ++V GL L + + +YW D R+ R ++ + G
Sbjct: 1268 HEIRRIDLHK-----RDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGG 1322
Query: 181 TNRI-VLAKDNITQPRGMMLD 200
+ I V+ + + P G+ +D
Sbjct: 1323 VSAIEVVVEHGLATPEGLTVD 1343
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 107/240 (44%), Gaps = 55/240 (22%)
Query: 77 PGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA-DLEE 133
PG CS +C +++ + C C G+ L D +CK + R I+ DL
Sbjct: 483 PGGCSHICLLSSSYKTRTCRCRTGFNLGSDGRSCKRPKNELFLFYGKGRPGIVRGMDLNT 542
Query: 134 KGKDH-----------RAQD------------------------------IVVSGLDLVE 152
K D RA D I+ LD VE
Sbjct: 543 KIADEYMIPIENLVNPRALDFHAETNYIYFADTTSFLIGRQKIDGTERETILKDDLDNVE 602
Query: 153 GLAYDWIGGHIYWL-DSRLNRIEVC--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
G+A DWIG ++YW D I V ++ +R L + ++ PRG+++DP G W++
Sbjct: 603 GIAVDWIGNNLYWTNDGHRKTINVARLEKASQSRKTLLEGEMSHPRGIVVDPVNG--WMY 660
Query: 210 WTDWGENP------RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
WTDW E+ RIE+ MDG NR +++K+ WPNGLTLD T +Y+ D+ D I+
Sbjct: 661 WTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTNTLYWCDAYYDHIE 720
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 17/131 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCT 335
+ R LY++D G+ +I N +GS L+ +L+ +A+A+D G L
Sbjct: 293 LTRNLYFVDHVGD----RIFVCNSNGSVCVTLIDLELHNPKAIAVDPIAGKL-------- 340
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
F+TD+G ++ER MDG NR+ II +K P L LD+ + VY+ D LD++
Sbjct: 341 ---FFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVGVV 397
Query: 396 NYDGTGRQQVI 406
+Y G R VI
Sbjct: 398 DYQGKNRHTVI 408
>gi|403302460|ref|XP_003941876.1| PREDICTED: low-density lipoprotein receptor [Saimiri boliviensis
boliviensis]
Length = 621
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 140/288 (48%), Gaps = 47/288 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 289 ECITLDKVCNSARDCRDWSDEPLKECGTNECLDNNGGCSHICNDLKIGHECLCPDGFQLV 348
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
C+D++EC+ P CSQ+C N +G Y C C EG+ L+ CKA+ S A+LI +N
Sbjct: 349 AQR-RCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG-SIAYLIFTN 406
Query: 123 RHSIL------------------VADLEEKGKDHRA------------------------ 140
RH + V L+ + +R
Sbjct: 407 RHEVRKMTLDRSEYTSLIPNLRNVVALDMEVASNRIYWSDLSQRMIYSTQLDGAHGFSSY 466
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++ L +GLA DWI +IYW DS L + V D G R L ++ ++PR +++D
Sbjct: 467 HTVISKDLQAPDGLAVDWIHSNIYWTDSVLGTVSVADTRGVKRKTLFREPGSKPRAIVVD 526
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248
P G +++WTDWG + +I++ G++G + ++++ I WPNG+TL A
Sbjct: 527 PVHG--FMYWTDWGISAKIKKGGLNGVDVYSLVTDNIQWPNGITLGSA 572
>gi|326671519|ref|XP_691606.5| PREDICTED: low-density lipoprotein receptor-related protein 1
[Danio rerio]
Length = 996
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 145/324 (44%), Gaps = 70/324 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD-----LAECKHKFGLCSNTCHPTPLGA--LCTCP 56
+C++L C+ DC + + C+ L EC+ +C + H G+ C+C
Sbjct: 260 KCISLNLRCNFFNDCEDYGSDEINCNKKDSGLNECRLNRSMCGDEGHCVVNGSDSFCSCR 319
Query: 57 PGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAA 116
PG TC D+NEC Q G CS +C NTKG + CSC++ ++ N TCKA +
Sbjct: 320 PG-FQKTHPQTCSDVNECRQFGICSHICNNTKGGHKCSCHKNFIRV--NDTCKADSSDKQ 376
Query: 117 FLIIS--------------------------------------------NRHSILVADLE 132
L ++ N H+ ++ E
Sbjct: 377 ALYVADDNEIRSLYPGMQNWIYEQAFQGDANVRIDAMDLHIKSKRIFWTNWHTGRISSFE 436
Query: 133 E--------------KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDE 178
+ + D R D+ + GL + G+A DW+ +IYW DS + IEV
Sbjct: 437 QPSAGPTSPNSNRNRRQTDPRVTDLEIPGLKMPRGIAVDWVANNIYWTDSGRDVIEVAQM 496
Query: 179 NGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY 238
NG NR L I +P +++DP GT ++W DWG +P+IE MDG+ R T++ I
Sbjct: 497 NGRNRKTLISGMIDEPYAIVVDPQRGT--MYWADWGNHPKIETAAMDGTLRETLVHDNIQ 554
Query: 239 WPNGLTLDIATRRVYFADSKLDFI 262
WP GL +D R+Y+AD+KL I
Sbjct: 555 WPTGLAVDYFNERLYWADAKLSVI 578
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 112/475 (23%), Positives = 183/475 (38%), Gaps = 104/475 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAEC------------------KHKFGLCSNTCH 45
C L CDG+ DC + +DE P C +C KH G+ N C
Sbjct: 176 CKPLGWKCDGEDDCGDNSDENPDVCKQFQCPPSRQFRCHNDRVCLPLSKHCDGV--NNCG 233
Query: 46 --------PTPLGALC-----TCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYI 92
TP A+C TC G+ +S + + C N+CE G ++ N K S +
Sbjct: 234 DNSDEQNCQTPPPAVCGKSEFTCSSGKCISLN-LRCNFFNDCEDYGS-DEINCNKKDSGL 291
Query: 93 CSCNEGYVLEYDNHTCKAINHSAAFLI----ISNRHSILVADLEEKGKDHRAQDIVVSGL 148
C + D C +N S +F H +D+ E
Sbjct: 292 NECRLNRSMCGDEGHC-VVNGSDSFCSCRPGFQKTHPQTCSDVNE-----------CRQF 339
Query: 149 DLVEGLAYDWIGGHIYWLDSRLNRI-EVCDENGTNRIVLAKDNITQPRGMMLDPSPGTR- 206
+ + + GGH R+ + C + +++ L + + R + PG +
Sbjct: 340 GICSHICNNTKGGHKCSCHKNFIRVNDTCKADSSDKQALYVADDNEIRSLY----PGMQN 395
Query: 207 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN--------------GLTLDIATRRV 252
W++ + + + MD I S +I+W N G T + R
Sbjct: 396 WIYEQAFQGDANVRIDAMD----LHIKSKRIFWTNWHTGRISSFEQPSAGPTSPNSNRNR 451
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
D ++ ++ L++ + + +YW D G + + + A M+G N L+SG
Sbjct: 452 RQTDPRVTDLEIPGLKMPRGIAVDWVANNIYWTDSGRDVIEV----AQMNGRNRKTLISG 507
Query: 313 QLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 370
+ E A+ +D + G +Y W DWG +P+IE MDG+ R T++ I WP
Sbjct: 508 MIDEPYAIVVDPQRGTMY-----------WADWGNHPKIETAAMDGTLRETLVHDNIQWP 556
Query: 371 NGLTLDIATRRVYFADSKLDFIDFCNYDGTGR-----------QQVILIDLMVEF 414
GL +D R+Y+AD+KL I +GT QQ ID+ +F
Sbjct: 557 TGLAVDYFNERLYWADAKLSVIGSVRLNGTDPVIAVSSIKNNLQQPFSIDIFEDF 611
>gi|198429581|ref|XP_002120439.1| PREDICTED: similar to rCG59548 [Ciona intestinalis]
Length = 1996
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 151/328 (46%), Gaps = 75/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGC----DLAECKHKFGL---CSNTCHPTPLGALCTCP 56
RC+ + GK+DC N D C D C H CS++C PT G C+CP
Sbjct: 1138 RCITVI----GKSDCVNKCDHNVDCISGQDELNCNHGVCANSGCSHSCTPTNTGFECSCP 1193
Query: 57 PGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA- 115
G+ LS+D TCQD++ C G C+ +C T +Y CSC++ + +++ + T + A
Sbjct: 1194 KGKELSSDHATCQDIDYCRHRGTCAHICHTTPRAYHCSCHKNWKIDHYDVTKCVYDKPAP 1253
Query: 116 -AFLIISNRHSILVADL--------EEKGK------------------------------ 136
F+I SN+ S+ +L E K K
Sbjct: 1254 PPFIIFSNKRSLKYMELNTTSIHENERKRKFQYLVEGFRQVLGLDFHYHRNLIFFTDIIQ 1313
Query: 137 --------DHRAQD----------IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDE 178
+ A+D I+ G+ EG+A DWI IY+++S LN+I++
Sbjct: 1314 DTITRATLTYNAEDNSLTLSDQQAIITQGIMTPEGIAVDWINDKIYFVESTLNQIQMATL 1373
Query: 179 NGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTK- 236
G R V+ + + PRG+ +DP G +LFWTDWG N R+ER + G +R I
Sbjct: 1374 EGNMRTVVVAEQLVNPRGVAVDPRFG--YLFWTDWGVGNSRVERSTLAGDDRVQIWKADG 1431
Query: 237 --IYWPNGLTLDIATRRVYFADSKLDFI 262
WPNGLT+D RVY+AD+K D I
Sbjct: 1432 DGDGWPNGLTIDYMENRVYWADAKYDII 1459
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 127/308 (41%), Gaps = 61/308 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCD--LAECKHKFGL-----CSNTCHPTPLG-ALCTCP 56
CV ++CDG DCP+ +DE C+ L F L C + C P G C CP
Sbjct: 133 CVAYQQLCDGNPDCPDRSDESTDCEELLEPGYTGFRLCDALSCEHACTFLPEGLPTCYCP 192
Query: 57 PGEILSNDSVTCQDMNECEQPGYCSQMCTNTKG-SYICSCNEGYVLEYDNHTCKAINHSA 115
PG IL ND+ C+ N C CSQ C T G + CSC + + + N + I +
Sbjct: 193 PGSILYNDT-KCKPANICNLTKPCSQTCVQTSGWEFTCSCMDSFFINPHNSSHCLIEEGS 251
Query: 116 AF------LIISNRHSILVADLEEKGKDHRAQDI-------------------------- 143
F LI ++ I ++E + + + +
Sbjct: 252 IFQSSEPYLIAASDQQIQSYNMEGQRQRSFSSSVARILPTVDYNTHTAYWISHPKSGPAR 311
Query: 144 -VVSGLDLVE--------------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV--L 186
V + LD ++ +A DW+ G+IY+L+++ I VC + L
Sbjct: 312 LVSASLDHLKETETIELPYSIDNCQIAVDWVTGNIYFLNTKDEHIFVCSVTQPISCISLL 371
Query: 187 AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 246
++ M LD G ++F+ + G +I R+ MDG+N I+ + + GLT+D
Sbjct: 372 QQNKPATLLEMTLDAYAG--YIFYFEHGTYSKINRLDMDGTNYQNIVKISLSYAQGLTVD 429
Query: 247 IATRRVYF 254
R+YF
Sbjct: 430 PYGERLYF 437
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 90/220 (40%), Gaps = 36/220 (16%)
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD---------ENGTN--RIVL 186
H +Q I + EGLA DW G++ W D I + +G R VL
Sbjct: 593 HYSQVIFNQSVYNCEGLAIDWSNGNMLWTDDGYKTINIASLAPLGVGPLGHGPQFLRKVL 652
Query: 187 AKDNITQPRGMMLDPSPGTRWLFWTDWG--ENP-----RIERIGMDGSNRSTIIS-TKIY 238
+ PR +++ + ++W+ W E P +IE MDGS+R + + + I
Sbjct: 653 VNGVTSHPRAIVVHEARSV--IYWSVWEPIETPQINYGKIETSWMDGSHREILYTGSDIL 710
Query: 239 WPNGLTLDIATRRVYFADSKLDFIDCKSL--EIKTNVNYSTIFRKLYWIDEGGNGVPLKI 296
WPNG+T+D +Y+ ++ D I+ + IKT V I GN
Sbjct: 711 WPNGITVDTLRDVIYYTEAFYDKIEAIQINGRIKTTV-----------ISGTGNQFGHPF 759
Query: 297 GKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
+ +G++ + G+ D +G++Y L R
Sbjct: 760 SISLFEGASKDNTLQGRYL--FVADYRSGLIYRYNLTSNR 797
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 80/195 (41%), Gaps = 23/195 (11%)
Query: 78 GYCSQMCTNTKG--SYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G C + T T ++ CSC Y L D +C+ I + FL+ S H I + +
Sbjct: 1556 GLCIPVPTATANHLTHKCSCPHFYKLSTDGVSCEKIQN---FLLFS--HFIEIQGMRLDN 1610
Query: 136 KDHRA-QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
+ A Q + + LA+DW IYW DS+ I+ NG++ + +
Sbjct: 1611 LNFSAIQALSSPDVGRATRLAHDWSHDRIYWPDSKSEEIKSSFINGSDVTTVVDTDSANV 1670
Query: 195 RGMMLDPSPGTRWLFWTDWGE----------NPRIERIGMDGSNRSTIIST---KIYWPN 241
G+++DP T ++WT + E N + +DG + + + P
Sbjct: 1671 FGLVVDPLHKT--IYWTSYIELSYAPNKKLINSYVMVASLDGRYKYQLGGPGWENVSRPK 1728
Query: 242 GLTLDIATRRVYFAD 256
LT D+ +YF D
Sbjct: 1729 YLTSDVQHAMLYFTD 1743
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%)
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
++F+ + G +I R+ MDG+N I+ + + GLT+D R+YF + I +
Sbjct: 390 YIFYFEHGTYSKINRLDMDGTNYQNIVKISLSYAQGLTVDPYGERLYFFELHSGCIQSVD 449
Query: 397 YDGTGRQQ 404
Y G R +
Sbjct: 450 YRGKFRTK 457
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 80/202 (39%), Gaps = 43/202 (21%)
Query: 215 ENPRIERIGMDGSNRSTII-STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
EN R++ IG+ + S +I + +Y GL +D + + + D I+ SL
Sbjct: 580 ENMRLKHIGLARWHYSQVIFNQSVYNCEGLAIDWSNGNMLWTDDGYKTINIASL------ 633
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN-ASILVSGQLYEALALDLENGMLYYSTL 332
PL +G +LV+G A+ +
Sbjct: 634 ------------------APLGVGPLGHGPQFLRKVLVNGVTSHPRAIVVHEARSV---- 671
Query: 333 KCTRWLFWTDWG--ENP-----RIERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYF 384
++W+ W E P +IE MDGS+R + + + I WPNG+T+D +Y+
Sbjct: 672 -----IYWSVWEPIETPQINYGKIETSWMDGSHREILYTGSDILWPNGITVDTLRDVIYY 726
Query: 385 ADSKLDFIDFCNYDGTGRQQVI 406
++ D I+ +G + VI
Sbjct: 727 TEAFYDKIEAIQINGRIKTTVI 748
>gi|405952881|gb|EKC20639.1| Low-density lipoprotein receptor-related protein 5 [Crassostrea
gigas]
Length = 1794
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/246 (37%), Positives = 124/246 (50%), Gaps = 52/246 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
A+DI+VSGL +GLA DWI +YW DS NR+EV + NG+ R VL + + QPR + L
Sbjct: 366 AEDIIVSGLVSPDGLACDWIAEKLYWADSETNRLEVSNLNGSFRSVLFWEELDQPRAIAL 425
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDG--SNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
DP G W+FWTDWGE P+IER GMDG RS II I+WPNGLT+D A ++Y+AD+
Sbjct: 426 DPLTG--WMFWTDWGEVPKIERAGMDGDRKTRSIIIDKNIHWPNGLTIDYADNKIYWADA 483
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ--LY 315
K+ + I + DG N +V+G+ L
Sbjct: 484 KVKY----------------------------------IASCDYDGKNHREVVAGEKILS 509
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
AL L + R LFWTDW E + GSN I+ IY P + +
Sbjct: 510 HPFALTLSD-----------RTLFWTDWQERSIFSCDKITGSNIRPIMEN-IYSPMDIHV 557
Query: 376 DIATRR 381
A+R+
Sbjct: 558 FSASRQ 563
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 169/329 (51%), Gaps = 43/329 (13%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ +G+ +G+A DWI ++YW D+ +RIEV NGT+R VL D++ +PR + LDP+
Sbjct: 682 VIRTGVYHPDGIAVDWIARNLYWTDTGTDRIEVARLNGTSRRVLISDDLDEPRAIALDPA 741
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI--ATRRVYFADSKLD 260
G ++W+DWG+ P+IE +DGS+R +I++ + WPNGL +DI +++Y+ D+K D
Sbjct: 742 AGQ--MYWSDWGKVPKIEVANLDGSSRQVLINSSLGWPNGLAIDIHATPKKLYWGDAKHD 799
Query: 261 FIDCKS---------LEIKTNV----NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307
I+ ++ K N+ +S + +YW D + ++ K N G++
Sbjct: 800 KIEVSDVDGTNRIVLVDEKQNIPHLFGFSLLGDNIYWTDWQRRSIE-RVNKHN--GTDRK 856
Query: 308 ILVSGQLYEALALDLENGMLYYSTLKCTRW--------LFWTDWGENPRIERIGMDGSNR 359
++V QL + + L + Y T C + L+ D G RI R ++GS
Sbjct: 857 VIVD-QLPDLMGLKAVSVFNYSGTNPCAHYNGGCSHLCLYTADQGV--RISRAFLNGSAL 913
Query: 360 STIISTKIYWPNGLTLDIATRRVYFADSKLD-FIDFCNYDGTGRQQVILIDLMVEFTNDL 418
I+ + +P G+ +D + +Y+ D+ + I+ DG+ R+ +I DL
Sbjct: 914 EPIVQYGLTYPEGIAVDWVAKNIYWIDTGMKRRIEVARLDGSSRRVIIWKDL-------- 965
Query: 419 MGDNGVPALALDLENGMLYYSTEGAEFLK 447
ALA++ +G +Y++ + L+
Sbjct: 966 ---ESPRALAVNPPDGYIYWTDWSTQKLE 991
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 79/131 (60%), Gaps = 15/131 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRW 337
I KLYW D N ++ +N++GS S+L +L + A+ L+ T W
Sbjct: 385 IAEKLYWADSETN----RLEVSNLNGSFRSVLFWEELDQPRAIALD---------PLTGW 431
Query: 338 LFWTDWGENPRIERIGMDG--SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+FWTDWGE P+IER GMDG RS II I+WPNGLT+D A ++Y+AD+K+ +I C
Sbjct: 432 MFWTDWGEVPKIERAGMDGDRKTRSIIIDKNIHWPNGLTIDYADNKIYWADAKVKYIASC 491
Query: 396 NYDGTGRQQVI 406
+YDG ++V+
Sbjct: 492 DYDGKNHREVV 502
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 119/247 (48%), Gaps = 58/247 (23%)
Query: 184 IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+VL + I + +D P ++WTD E I+R +DG+ +I T +Y P+G+
Sbjct: 637 VVLPLNEIKH--AIAIDYDPVEDQVYWTD-DEVRAIKRAYLDGTGEEVVIRTGVYHPDGI 693
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
+D R LYW D G + +I A ++G
Sbjct: 694 AVDWIAR------------------------------NLYWTDTGTD----RIEVARLNG 719
Query: 304 SNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
++ +L+S L E A+ALD G +Y W+DWG+ P+IE +DGS+R
Sbjct: 720 TSRRVLISDDLDEPRAIALDPAAGQMY-----------WSDWGKVPKIEVANLDGSSRQV 768
Query: 362 IISTKIYWPNGLTLDI--ATRRVYFADSKLDFIDFCNYDGTGRQQVILID----LMVEFT 415
+I++ + WPNGL +DI +++Y+ D+K D I+ + DGT R ++L+D + F
Sbjct: 769 LINSSLGWPNGLAIDIHATPKKLYWGDAKHDKIEVSDVDGTNR--IVLVDEKQNIPHLFG 826
Query: 416 NDLMGDN 422
L+GDN
Sbjct: 827 FSLLGDN 833
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 140/338 (41%), Gaps = 49/338 (14%)
Query: 128 VADLEEKGKD--HRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN-R 183
V +E G D + + I++ + GL D+ IYW D+++ I CD +G N R
Sbjct: 440 VPKIERAGMDGDRKTRSIIIDKNIHWPNGLTIDYADNKIYWADAKVKYIASCDYDGKNHR 499
Query: 184 IVLAKDNI-TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 242
V+A + I + P + L R LFWTDW E + GSN I+ IY P
Sbjct: 500 EVVAGEKILSHPFALTL----SDRTLFWTDWQERSIFSCDKITGSNIRPIMEN-IYSPMD 554
Query: 243 LTLDIATRRVYFAD------------------SKLDFIDCKSLEIKTNVNYSTIFRKLYW 284
+ + A+R+ D K F C +N +T + +
Sbjct: 555 IHVFSASRQPSRPDRHPCTINNGGCSHLCLISPKKPFFACACPTGVKLLNKTTCAKGVEQ 614
Query: 285 IDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWG 344
+ ++ +M +L ++ A+A+D + ++WTD
Sbjct: 615 LLLLARRRDIRKISLDMPDHTDVVLPLNEIKHAIAIDYD---------PVEDQVYWTD-D 664
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
E I+R +DG+ +I T +Y P+G+ +D R +Y+ D+ D I+ +GT R+
Sbjct: 665 EVRAIKRAYLDGTGEEVVIRTGVYHPDGIAVDWIARNLYWTDTGTDRIEVARLNGTSRRV 724
Query: 405 VILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+I DL + A+ALD G +Y+S G
Sbjct: 725 LISDDL-----------DEPRAIALDPAAGQMYWSDWG 751
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 140/316 (44%), Gaps = 60/316 (18%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIG--GHIYWLDSRLNRIEVCDENGTNR 183
I VA+L+ + Q ++ S L GLA D +YW D++ ++IEV D +GTNR
Sbjct: 756 IEVANLDGSSR----QVLINSSLGWPNGLAIDIHATPKKLYWGDAKHDKIEVSDVDGTNR 811
Query: 184 IVLA--KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIG-MDGSNRSTII------- 233
IVL K NI G L ++WTDW + IER+ +G++R I+
Sbjct: 812 IVLVDEKQNIPHLFGFSLLGDN----IYWTDW-QRRSIERVNKHNGTDRKVIVDQLPDLM 866
Query: 234 ---STKIYWPNG----------------LTLDIATR--RVYFADSKLDFIDCKSLEIKTN 272
+ ++ +G T D R R + S L+ I L
Sbjct: 867 GLKAVSVFNYSGTNPCAHYNGGCSHLCLYTADQGVRISRAFLNGSALEPIVQYGLTYPEG 926
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYS 330
+ + + +YWID G+ +I A +DGS+ +++ L ALA++ +G +Y
Sbjct: 927 IAVDWVAKNIYWID---TGMKRRIEVARLDGSSRRVIIWKDLESPRALAVNPPDGYIY-- 981
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 390
WTDW ++ER +DG+ R TI +I +GLT+D +R+Y+
Sbjct: 982 ---------WTDWSTQ-KLERAALDGTMRETI-RREIGQVHGLTIDYGEKRLYWTSLDQK 1030
Query: 391 FIDFCNYDGTGRQQVI 406
I + +G +VI
Sbjct: 1031 VIASSDLNGQDMVRVI 1046
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 122/285 (42%), Gaps = 74/285 (25%)
Query: 67 TCQDMNECEQPGYCSQMCT------NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
+C+D N G CS +C ++ ++ C+C + L DN TC A FL+
Sbjct: 1110 SCKDNN-----GECSHLCLAHPVNHSSGTTHHCACPTHFRLNVDNKTCSA---PKTFLLF 1161
Query: 121 SNRHSI--LVADLEEKGKDHRAQDIVVSGLDLVEGLAYD-------WIGGH--------- 162
S +++I LV + ++ D + + L ++ L+YD WI G
Sbjct: 1162 SQKNTISRLVINNDDFDPDTPEVVLPIPQLKNIKALSYDPVEHFLYWIEGKNMVIKKAAA 1221
Query: 163 -----------------------------IYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
+YW ++ N I + NGT V+ + +
Sbjct: 1222 NGTLVSTVVTNQNGEHRPFDIAVDPYSRVLYWTCAKKNTINITGLNGTPVGVIVEGDHYV 1281
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
PR ++L+P G ++WTD G +P I R MDG+ R + +++ P L +DI ++Y
Sbjct: 1282 PRYIVLNPLGGH--MYWTDMGSHPSIIRASMDGTARIKLFDSELDRPGPLAIDIEGNKLY 1339
Query: 254 FADSKLDFIDCKSL----------EIKTNVNYSTIFRK-LYWIDE 287
+ADS+L+ I+C L + +N IF LYWID+
Sbjct: 1340 WADSRLNRIECSDLSGGNRKNLVDQDVSNPRGMAIFGNFLYWIDK 1384
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 142/341 (41%), Gaps = 55/341 (16%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
LE D ++ + + V GL D+ +YW I D NG + + + D
Sbjct: 990 LERAALDGTMRETIRREIGQVHGLTIDYGEKRLYWTSLDQKVIASSDLNGQDMVRVITDQ 1049
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGM-DGSNRSTIISTKIYWPNGLTLDIAT 249
+ QP G+ L ++FW DW + IER G+NR+TI S+ + L ++
Sbjct: 1050 VPQPMGLTL----YHDFIFWADW-QRQTIERANKSSGTNRTTIQSSIDNVRDILVFH-SS 1103
Query: 250 RRVYFADSKLDFIDCKSLEIKTNVNYS----------TIFR-----------KLYWIDEG 288
R+ K + +C L + VN+S T FR K + +
Sbjct: 1104 RQSGINSCKDNNGECSHLCLAHPVNHSSGTTHHCACPTHFRLNVDNKTCSAPKTFLLFSQ 1163
Query: 289 GNGVP-LKIGKANMDGSNASILVS-GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
N + L I + D +++ QL AL + +L+W + G+N
Sbjct: 1164 KNTISRLVINNDDFDPDTPEVVLPIPQLKNIKALSYD---------PVEHFLYWIE-GKN 1213
Query: 347 PRIERIGMDGSNRSTIISTK--IYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
I++ +G+ ST+++ + + P + +D +R +Y+ +K + I+ +GT
Sbjct: 1214 MVIKKAAANGTLVSTVVTNQNGEHRPFDIAVDPYSRVLYWTCAKKNTINITGLNGTP--- 1270
Query: 405 VILIDLMVEFTNDLMGDNGVPA-LALDLENGMLYYSTEGAE 444
+ ++VE GD+ VP + L+ G +Y++ G+
Sbjct: 1271 ---VGVIVE------GDHYVPRYIVLNPLGGHMYWTDMGSH 1302
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Query: 123 RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
+ I VA L+ G R I+ L+ LA + G+IYW D ++E +GT
Sbjct: 944 KRRIEVARLD--GSSRRV--IIWKDLESPRALAVNPPDGYIYWTDWSTQKLERAALDGTM 999
Query: 183 RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 242
R + ++ I Q G+ +D G + L+WT + I ++G + +I+ ++ P G
Sbjct: 1000 RETIRRE-IGQVHGLTID--YGEKRLYWTSLDQK-VIASSDLNGQDMVRVITDQVPQPMG 1055
Query: 243 LTL 245
LTL
Sbjct: 1056 LTL 1058
>gi|449682193|ref|XP_004210018.1| PREDICTED: low-density lipoprotein receptor-related protein 1B-like
[Hydra magnipapillata]
Length = 1054
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 182/389 (46%), Gaps = 79/389 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C+ +T VC+ DC NG DE CD+ EC ++ G CS C LG C CP G L +
Sbjct: 447 KCIPMTSVCNSINDCANGDDEDNLCDVKECDNENGGCSYKCKELKLGYECLCPQGFQLDS 506
Query: 64 DSVTCQDMNECEQ---PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
D +C D++EC++ CSQ+CTN G+Y CSC+ G+ L N C+A N S LI
Sbjct: 507 DKKSCIDIDECKEGWNVSKCSQICTNLNGTYKCSCHNGFNLV--NKKCRA-NGSVVDLIF 563
Query: 121 SNRHSILVADLEEKGKDHRA--------------------------------------QD 142
+N + + L+ + +R
Sbjct: 564 ANELDVRI--LQSNSQHYRKFADAYNANAVAVDVLTEMIYWSDIVKGTISCASRSNFNPK 621
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT-NRIVLAKDNITQPRGMMLDP 201
+++SGL LA DWIG +YW+D+ N I V + +G+ + ++ + + G+ + P
Sbjct: 622 VIISGLKKPRSLAVDWIGRKLYWIDTAFNNISVSNLDGSFPKTIVEGNGFEEFSGLAIHP 681
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +LFWTD N ++ R + G++++T+ S + P G+T+DI + +VY++D L
Sbjct: 682 FEG--YLFWTDVATNGKVVRSNLLGTSQTTLAS-DLGMPMGITVDIESNKVYWSDMHLHH 738
Query: 262 IDCKSLE----------IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN-MDGS-----N 305
I SL+ I++ ++ + ++YW + G KI +AN DG+ N
Sbjct: 739 ICSVSLDGSAFNRILKNIESPLSIAVFEDEVYWTSKVGK----KIYRANKFDGTEKSEYN 794
Query: 306 ASIL---------VSGQLYEALALDLENG 325
AS L S Q Y ++ NG
Sbjct: 795 ASFLSPMDVVVYHSSAQFYSPHPCNINNG 823
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 31/184 (16%)
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIF---------------RKL 282
Y N + +D+ T +Y++D I C S ++N N I RKL
Sbjct: 586 YNANAVAVDVLTEMIYWSDIVKGTISCAS---RSNFNPKVIISGLKKPRSLAVDWIGRKL 642
Query: 283 YWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD 342
YWID N + + +N+DGS +V G +E + G+ + +LFWTD
Sbjct: 643 YWIDTAFNNISV----SNLDGSFPKTIVEGNGFEEFS-----GLAIHPF---EGYLFWTD 690
Query: 343 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
N ++ R + G++++T+ S + P G+T+DI + +VY++D L I + DG+
Sbjct: 691 VATNGKVVRSNLLGTSQTTLAS-DLGMPMGITVDIESNKVYWSDMHLHHICSVSLDGSAF 749
Query: 403 QQVI 406
+++
Sbjct: 750 NRIL 753
>gi|260805464|ref|XP_002597607.1| hypothetical protein BRAFLDRAFT_123121 [Branchiostoma floridae]
gi|229282872|gb|EEN53619.1| hypothetical protein BRAFLDRAFT_123121 [Branchiostoma floridae]
Length = 1626
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 121/241 (50%), Gaps = 48/241 (19%)
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
D++ +GL +GLA DWIG +YW DS NRIEV + +GT+R VL + + QPR + LDP
Sbjct: 91 DVISTGLVSPDGLACDWIGRKLYWTDSETNRIEVSNLDGTSRKVLFWEELDQPRAIALDP 150
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
+ G ++FWTDWGE P+IER GMDG+ R ++ IYWPNGLTLD A R+Y+AD+KL
Sbjct: 151 ARG--YMFWTDWGEVPKIERAGMDGTGRRVVVDDNIYWPNGLTLDYAELRLYWADAKLQL 208
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I AN DGS +V G L AL
Sbjct: 209 IH----------------------------------YANFDGSERRAVVEGSLPHPFALT 234
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 381
L +Y WTDW N + G ++ +I ++I+ P + + R+
Sbjct: 235 LYGDTIY-----------WTDWQTNSIHSCHKISGEDKQ-VIHSEIFSPMDIHAYMPARQ 282
Query: 382 V 382
+
Sbjct: 283 L 283
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 153/341 (44%), Gaps = 87/341 (25%)
Query: 57 PGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS--YICSCNEGYVLEYDNHTCK----- 109
P L + CQ N G CS +C + + Y C+C G L D TC
Sbjct: 279 PARQLMRHTNPCQPNN-----GGCSHLCLMSPDAPNYRCACPTGVKLLDDERTCADGASE 333
Query: 110 ----------------AINHSAAFLIISN-RHSILVADLEEKG----KDHRAQDIVVSGL 148
+++ L I + RH+I + +G D A+ I + L
Sbjct: 334 ILLLARRTDLRRISLDTPDYTDVVLQIDDIRHAIAIDYDVVEGFVYWTDDEARAIRRARL 393
Query: 149 DLVE-----GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
D E G+A DW+ ++YW D+ +RIEV NGT+R +L +N+ +PR ++LDPS
Sbjct: 394 DGSEVEHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILIAENLDEPRAIVLDPSE 453
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +++WTDWG++P+IER +DGS+R + +T + WPNGL +D +RR+Y+ D+K D
Sbjct: 454 G--YMYWTDWGQHPKIERAELDGSHRVVLFNTSLVWPNGLAIDYQSRRIYWGDAKTD--- 508
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
KI AN++G+ +ILV +L L
Sbjct: 509 -------------------------------KIEYANLNGTGRTILVDEKLPHIFGFSLL 537
Query: 324 NGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTII 363
+Y WTDW + IER+ G +R I+
Sbjct: 538 GNYIY-----------WTDW-QRRSIERVHKTTGEDRQIIV 566
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 132/306 (43%), Gaps = 94/306 (30%)
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L+ +NR + + D G+ H + +VVS L+ L + + IYW D L I++
Sbjct: 25 LLFANRRDVRIID-AGPGRGHNST-VVVSNLEDAAALDFIYDQNVIYWTDVSLEMIKMIY 82
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
NG+ G++ D +IST +
Sbjct: 83 TNGS--------------GIVTD-------------------------------VISTGL 97
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P+GL D I RKLYW D N +I
Sbjct: 98 VSPDGLACDW------------------------------IGRKLYWTDSETN----RIE 123
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
+N+DG++ +L +L + A+ALD G ++FWTDWGE P+IER GMD
Sbjct: 124 VSNLDGTSRKVLFWEELDQPRAIALDPARG-----------YMFWTDWGEVPKIERAGMD 172
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFT 415
G+ R ++ IYWPNGLTLD A R+Y+AD+KL I + N+DG+ R+ V+ L F
Sbjct: 173 GTGRRVVVDDNIYWPNGLTLDYAELRLYWADAKLQLIHYANFDGSERRAVVEGSLPHPFA 232
Query: 416 NDLMGD 421
L GD
Sbjct: 233 LTLYGD 238
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 106/230 (46%), Gaps = 46/230 (20%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C C C G L D TC AFL+ S R I LE D
Sbjct: 594 GGCSHLCLYRPSGVSCGCPMGLELITDMRTCIV---PEAFLLFSRRADIRRISLETNNND 650
Query: 138 ----------------------------------------HRAQDIVVSGLDLVEGLAYD 157
A+ I+ GLD EG+A D
Sbjct: 651 VVIPLPGVKEASALDFDINDNRIYWTDVSLKSISRAFMNGSSAEKIIQFGLDYPEGMAVD 710
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP 217
W+ ++YW D+ NRIEV +G++R VL ++ PR + LDP+ G +++W++WG +P
Sbjct: 711 WVAHNLYWADTGTNRIEVARLDGSSRKVLVWQDLDNPRSLALDPAFG--FMYWSEWGGDP 768
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
+IER MDG+NR ++ + + NGLT+D RR+Y+AD + I+ ++
Sbjct: 769 KIERASMDGTNRFILVDS-LGRANGLTIDYPERRLYWADLDTNLIESSNM 817
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 20/210 (9%)
Query: 219 IERIGMDGSNRSTIIST--KIYWPNGLTLDIATRRVYFADSKLDFI-----DCKSLEIKT 271
+ RI +D + + ++ I + D+ VY+ D + I D +E
Sbjct: 343 LRRISLDTPDYTDVVLQIDDIRHAIAIDYDVVEGFVYWTDDEARAIRRARLDGSEVEHPD 402
Query: 272 NVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYST 331
+ + R LYW D G + +I ++G++ IL++ L E A+ L+ Y
Sbjct: 403 GIAVDWVARNLYWTDTGTD----RIEVTRLNGTSRKILIAENLDEPRAIVLDPSEGY--- 455
Query: 332 LKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
++WTDWG++P+IER +DGS+R + +T + WPNGL +D +RR+Y+ D+K D
Sbjct: 456 ------MYWTDWGQHPKIERAELDGSHRVVLFNTSLVWPNGLAIDYQSRRIYWGDAKTDK 509
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
I++ N +GTGR ++ L F L+G+
Sbjct: 510 IEYANLNGTGRTILVDEKLPHIFGFSLLGN 539
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 32/212 (15%)
Query: 219 IERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N +I + + L DI R+Y+ D L F++ S E I+
Sbjct: 639 IRRISLETNNNDVVIPLPGVKEASALDFDINDNRIYWTDVSLKSISRAFMNGSSAEKIIQ 698
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + LYW D G N +I A +DGS+ +LV L +LALD
Sbjct: 699 FGLDYPEGMAVDWVAHNLYWADTGTN----RIEVARLDGSSRKVLVWQDLDNPRSLALDP 754
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y W++WG +P+IER MDG+NR ++ + + NGLT+D RR+
Sbjct: 755 AFGFMY-----------WSEWGGDPKIERASMDGTNRFILVDS-LGRANGLTIDYPERRL 802
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+AD + I+ N G R++VI +L F
Sbjct: 803 YWADLDTNLIESSNMLGNDRKRVISDNLPHPF 834
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 118/282 (41%), Gaps = 80/282 (28%)
Query: 78 GYCSQMCTNTKGS------------YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHS 125
G CS +C T +C C + L+ DN TC A+FL+ S R+
Sbjct: 899 GGCSHLCLATAMPSSTSAESAMDLPVMCGCPSHWKLDPDNRTCHP---PASFLLFSQRNL 955
Query: 126 ILVADLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG--- 180
I +E+ ++ DIV + L V+ + YD +G HIYW+D R+ +++ NG
Sbjct: 956 ISRMVFDEQ----QSPDIVLPIHQLRNVKVIDYDRMGEHIYWIDGRIKQLKRAKANGSEV 1011
Query: 181 -------------------------------TNRI------------VLAKDNITQPRGM 197
TN I V+ + +PR +
Sbjct: 1012 TSVVANLDSLFYPIDMAIDEFSRHIYWTCSQTNTINVTRISDLSPVGVVVSGDKERPRSI 1071
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+LDP G +++WT+ NP IE+ +DG+ R T+ S+ I P L +D ++Y+ D
Sbjct: 1072 VLDPKRG--YMYWTNMVSNPSIEKAALDGTERQTLFSSDIKQPGPLAIDTKYGKLYWTDI 1129
Query: 258 KLDFIDCKSL----------EIKTNVNYSTIF-RKLYWIDEG 288
+L+ I+ L ++ ++ TIF LYWID
Sbjct: 1130 ELNRIESSGLDGANRQVLVEQMIIQLSGLTIFGDHLYWIDRA 1171
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 137/331 (41%), Gaps = 50/331 (15%)
Query: 133 EKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
E+ + + +V+ LV GLA D+ IYW D++ ++IE + NGT R +L +
Sbjct: 468 ERAELDGSHRVVLFNTSLVWPNGLAIDYQSRRIYWGDAKTDKIEYANLNGTGRTILVDEK 527
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ G L +++WTDW + IER+ II ++ GL R
Sbjct: 528 LPHIFGFSL----LGNYIYWTDW-QRRSIERVHKTTGEDRQIIVDQLPDLMGLKAVNVQR 582
Query: 251 R-------------VYFADSKLDFIDC---KSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
+ + + C LE+ T++ + +
Sbjct: 583 TDGWNPCVDNNGGCSHLCLYRPSGVSCGCPMGLELITDMRTCIVPEAFLLFSRRAD---- 638
Query: 295 KIGKANMDGSNASILVS-GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
I + +++ +N +++ + EA ALD + + R ++WTD I R
Sbjct: 639 -IRRISLETNNNDVVIPLPGVKEASALDFD--------INDNR-IYWTDVSLK-SISRAF 687
Query: 354 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
M+GS+ II + +P G+ +D +Y+AD+ + I+ DG+ R+ ++ DL
Sbjct: 688 MNGSSAEKIIQFGLDYPEGMAVDWVAHNLYWADTGTNRIEVARLDGSSRKVLVWQDL--- 744
Query: 414 FTNDLMGDNGVPALALDLENGMLYYSTEGAE 444
+ +LALD G +Y+S G +
Sbjct: 745 --------DNPRSLALDPAFGFMYWSEWGGD 767
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 138/338 (40%), Gaps = 53/338 (15%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
+E D + I+V L GL D+ +YW D N IE + G +R + DN
Sbjct: 770 IERASMDGTNRFILVDSLGRANGLTIDYPERRLYWADLDTNLIESSNMLGNDRKRVISDN 829
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIG-MDGSNRSTIISTKIYWPNGLTLDI-- 247
+ P G+ + +++WTDW IER G NR+ I + Y + + + +
Sbjct: 830 LPHPFGL----TQYQDYVYWTDWNTR-SIERANKTTGENRTRIQGSLDYVMDIMDILVFH 884
Query: 248 ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG---KANMDGS 304
++R+ + ++ C L + T + ST E +P+ G +D
Sbjct: 885 SSRQSGWNQCAVNNGGCSHLCLATAMPSSTSA-------ESAMDLPVMCGCPSHWKLDPD 937
Query: 305 N------ASILVSGQ--LYEALALDLENG---MLYYSTLKCTR---------WLFWTDWG 344
N AS L+ Q L + D + +L L+ + ++W D G
Sbjct: 938 NRTCHPPASFLLFSQRNLISRMVFDEQQSPDIVLPIHQLRNVKVIDYDRMGEHIYWID-G 996
Query: 345 ENPRIERIGMDGSNRSTIIST--KIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
+++R +GS +++++ +++P + +D +R +Y+ S+ + I+
Sbjct: 997 RIKQLKRAKANGSEVTSVVANLDSLFYPIDMAIDEFSRHIYWTCSQTNTINVTRISDLSP 1056
Query: 403 QQVILIDLMVEFTNDLMGDNGVP-ALALDLENGMLYYS 439
V+ + GD P ++ LD + G +Y++
Sbjct: 1057 VGVV-----------VSGDKERPRSIVLDPKRGYMYWT 1083
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 71/141 (50%), Gaps = 23/141 (16%)
Query: 303 GSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST- 361
G N++++VS L +A ALD +Y + ++WTD I+ I +GS T
Sbjct: 43 GHNSTVVVS-NLEDAAALDF----IYDQNV-----IYWTDVSLE-MIKMIYTNGSGIVTD 91
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+IST + P+GL D R++Y+ DS+ + I+ N DGT R+ + +L
Sbjct: 92 VISTGLVSPDGLACDWIGRKLYWTDSETNRIEVSNLDGTSRKVLFWEEL----------- 140
Query: 422 NGVPALALDLENGMLYYSTEG 442
+ A+ALD G ++++ G
Sbjct: 141 DQPRAIALDPARGYMFWTDWG 161
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 20/106 (18%)
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
+++WTD E I R +DGS ++ P+G+ +D R +Y+ D+ D I+
Sbjct: 377 FVYWTD-DEARAIRRARLDGS--------EVEHPDGIAVDWVARNLYWTDTGTDRIEVTR 427
Query: 397 YDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+GT R+ +I +L + A+ LD G +Y++ G
Sbjct: 428 LNGTSRKILIAENL-----------DEPRAIVLDPSEGYMYWTDWG 462
>gi|158711988|gb|ABW79798.1| vitellogenin receptor [Penaeus monodon]
Length = 1941
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 140/297 (47%), Gaps = 45/297 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+++ +CD DC +G+DEG C K C + C TP G C C G +
Sbjct: 253 ECISIQAICDQHEDCRDGSDEGGLCSET---CKVTDCIHLCKMTPQGPHCMCKEGYARNT 309
Query: 64 DSVTCQDMNECE-QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
+ C D+NEC C C N G + CSC E Y+L+ D +CK A L ++
Sbjct: 310 STNDCIDVNECAANVSVCDHFCQNAVGGFNCSCAEDYMLQADKKSCKTTIQGDALLFMAQ 369
Query: 123 RHSILVADLE----EKGKDHRAQDIVVS-------------------------------- 146
+ I + DL + AQ I ++
Sbjct: 370 GNDIRMLDLGLTLYSQIYASFAQSIAIAYDPIDDMVYWSTDQGVFRISRRGGTIPSIVVN 429
Query: 147 -GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
G+ +VEGLA DW G ++Y DS + R+ VC +G++ VL N+T PRG+ LD
Sbjct: 430 EGVGMVEGLAVDWFGRNLYMADSVMKRVLVCSLSGSSCHVLMS-NLTHPRGIQLDLE--N 486
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
R+++WTD + +ER G+DGS R+ +IS + WPNGL +D RR+Y AD+ + +
Sbjct: 487 RYVYWTDVNRS-TLERAGLDGSGRTVLISEGVRWPNGLWIDAPARRIYIADAHTNEV 542
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 154/375 (41%), Gaps = 39/375 (10%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ VCDG DC NG+DEG C A+ G C +TC P +C+C G L+ D
Sbjct: 1302 CIASRLVCDGSADCLNGSDEGSLC--AKSCLGNGGCQHTCKEGPKNRICSCWKGFQLAED 1359
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
++C D+ EC+ CSQ C G ++CSC GY L D +CK ++++ +
Sbjct: 1360 QISCIDVKECDDEATCSQKCEERHGYHLCSCLPGYTLRPDRRSCKPAG-GDEYVVLVHPG 1418
Query: 125 SILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
SI L H A + + + + H + D I +G I
Sbjct: 1419 SI----LNMSRTFHLADKVAMPPHVQFSSVEFAPESHHFVYADKAHGVIGKMSMDGVVTI 1474
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR--STIISTKIYWPNG 242
+ + +P+G+ LDP + +++++ + G+ R S + + G
Sbjct: 1475 LFK--HRKRPQGLSLDPISNS--VYFSEQFSKAEVVDNGLIRVRREPSAAGTYSVIMVCG 1530
Query: 243 LTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMD 302
+ D VY + EI + + + R+L++ KI ++MD
Sbjct: 1531 MEGDKDCSIVYQSHGG---------EIPA-IRVAPMARRLFFCANNVAQDEAKIFTSDMD 1580
Query: 303 GSNASILVSGQLYEA--LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
G++A IL S ++ + LA+D +Y WTD N IE + G
Sbjct: 1581 GTSARIL-SHKVVKCGDLAVDEAKERVY-----------WTDLSRNA-IESVKWSGEGHR 1627
Query: 361 TIISTKIYWPNGLTL 375
++ ++ P GL L
Sbjct: 1628 -VVQENVHMPIGLAL 1641
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 5/122 (4%)
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+V G+ +A DW+ ++YW+D +EV E+G R L K P + +P
Sbjct: 736 IVQGVSRAISVAVDWLRRNVYWIDGTKAAVEVVREDGAFRTELLK---AMPHLTSITLAP 792
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVYFADSKLDF 261
+++ +D P I R G+D + S I++ + P + + +R+Y+ D L
Sbjct: 793 LLGFMYVSDASAEPFIIRCGLDAKSCSKIVTVDLVQPLSIIFETNPDIKRLYWCDHVLGR 852
Query: 262 ID 263
I+
Sbjct: 853 IE 854
>gi|67845961|dbj|BAE00008.1| LDL receptor [Oncorhynchus mykiss]
Length = 252
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 129/252 (51%), Gaps = 46/252 (18%)
Query: 28 CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNT 87
CD EC + G CS+ C+ G C CP G L+ D C+D++EC P CSQ+C N
Sbjct: 4 CDSNECLYNNGGCSHICNDLKFGYECQCPTGYYLT-DKKRCEDIDECANPDICSQICVNH 62
Query: 88 KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI--------------------- 126
GSY C C EGY ++ CKAI + A+L +NRH +
Sbjct: 63 MGSYKCECEEGYQVDPATKACKAIG-TVAYLFFTNRHEVRKMTLDKSESTRVIPHLKNAV 121
Query: 127 -----LVA------DLEEK---------GKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYW 165
+VA DL +K D +V+ S ++ EG+A+DW+ G+IYW
Sbjct: 122 ALDMDMVAKEIYWSDLSQKKIYSTSMDLAADTAQHKVVIDSDIEGPEGIAFDWVHGNIYW 181
Query: 166 LDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD 225
DS + I V NG+ R L ++++ +PR +++DP + +++WTDWG +IE+ G++
Sbjct: 182 TDSIRSSISVSTANGSRRKTLFQNDLAKPRAIVVDPH--SNFMYWTDWGTPAKIEKGGLN 239
Query: 226 GSNRSTIISTKI 237
G +R+ +++ I
Sbjct: 240 GGDRAALVTDNI 251
>gi|324503344|gb|ADY41456.1| Low-density lipoprotein receptor-related protein 8 [Ascaris suum]
Length = 554
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 149/326 (45%), Gaps = 80/326 (24%)
Query: 40 CSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY 99
C T H LC CP G L + C D++EC G C+Q C NT G YIC C GY
Sbjct: 28 CRTTVHN---ATLCYCPRGFRL--EGRVCVDIDECATVGTCAQKCINTPGGYICECYPGY 82
Query: 100 VLEYDNHT---------CKA--------INHSAA---FLIISNRHSILVADLEEK----- 134
L + C+A +++ AA F +ISN++ L+A LE
Sbjct: 83 RLTMGESSSDGPNTVGKCRARGSDPLLLLSNRAAIRRFDLISNKYEPLIAKLESAVAMDF 142
Query: 135 ----------------------GKDHRAQDI------------VVSGLDLVEGLAYDWIG 160
GK +DI V + +GLA DW+
Sbjct: 143 LHKNDTLIWSDVSQEKIMICHMGKGLIVKDIRQCAEGGDNITLVDKDVSTPDGLAVDWVH 202
Query: 161 GHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIE 220
++W D+ L++I V D R L D + +PR + +DPS G +FWTDWG N RIE
Sbjct: 203 QLLFWTDTGLDQINVVDLVSRRRRTLFSDGLDEPRAIAVDPSRGL--IFWTDWGVNARIE 260
Query: 221 RIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLDFI-------DCKSLEIKTN 272
R GMDG++R+ +IS I WPNGL LDI +RVY+AD+K+ I + L I+++
Sbjct: 261 RAGMDGNDRAVLISGDSIKWPNGLALDILEQRVYWADAKVKLIMSCDYWGENTRLVIRSH 320
Query: 273 VNYS-----TIF-RKLYWIDEGGNGV 292
T+F +LYW D GV
Sbjct: 321 ERLRHPFSLTVFEERLYWTDWDHEGV 346
>gi|410926229|ref|XP_003976581.1| PREDICTED: low-density lipoprotein receptor-related protein 6-like
[Takifugu rubripes]
Length = 1681
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 114/227 (50%), Gaps = 48/227 (21%)
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
V+ GL +GLA DW+G +YW DS NRIEV + +G+ R +L + QPR + LDP
Sbjct: 91 VIPGLASPDGLACDWLGRKLYWTDSETNRIEVAELDGSMRKILFWQELDQPRAIALDPER 150
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +++WTDWGE P+IER GMDG+NRS II +IYWPNGLTLD +++Y+AD+K FI
Sbjct: 151 G--FMYWTDWGEIPKIERAGMDGTNRSMIIDKEIYWPNGLTLDYGQQKLYWADAKHSFIH 208
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
+ ++DGS+ ++V G L AL
Sbjct: 209 ----------------------------------RCDLDGSSREVVVKGDLPHPFAL--- 231
Query: 324 NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 370
LY T LFWTDW + I ++ I+ P
Sbjct: 232 --TLYEDT------LFWTDWNTH-SIHSCSKHTGGEQRVVHANIFSP 269
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 149/341 (43%), Gaps = 54/341 (15%)
Query: 26 PGCDLAECKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQM 83
PG + C G CS+ C P+ C CP G L D TC+D Q ++
Sbjct: 283 PGAS-SPCLLNNGGCSHLCLLSPSSPSYQCACPTGVQLLADGRTCRD--GATQVLLLARR 339
Query: 84 CTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ S VL+ D+ AI++ I + A + AQ
Sbjct: 340 TDLRRISLDTPDFTDIVLQVDDIRHAIAIDYDPVDGYIYWTDDDVKAIRRSRLDGSDAQF 399
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V S ++ +G+A DWI ++YW D+ +RIEV NGT R +L +++ +PR ++LDP
Sbjct: 400 VVTSQVNHPDGIAVDWIARNLYWTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPV 459
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWGE P+IER +DG R +++T + WPNGL LD R++Y+ D+K D
Sbjct: 460 AG--YMYWTDWGEVPKIERADLDGMERVVMVNTSLGWPNGLALDYDERKIYWGDAKTD-- 515
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
KI +MDG+ +LV +L L
Sbjct: 516 --------------------------------KIEVMHMDGTGRRVLVEDKLPHIFGFTL 543
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+Y WTDW + IER+ + R II
Sbjct: 544 LGDFIY-----------WTDW-QRRSIERVHKRTAEREFII 572
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 85/144 (59%), Gaps = 17/144 (11%)
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRW 337
RKLYW D N +I A +DGS IL +L + A+ALD E G +Y
Sbjct: 108 RKLYWTDSETN----RIEVAELDGSMRKILFWQELDQPRAIALDPERGFMY--------- 154
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
WTDWGE P+IER GMDG+NRS II +IYWPNGLTLD +++Y+AD+K FI C+
Sbjct: 155 --WTDWGEIPKIERAGMDGTNRSMIIDKEIYWPNGLTLDYGQQKLYWADAKHSFIHRCDL 212
Query: 398 DGTGRQQVILIDLMVEFTNDLMGD 421
DG+ R+ V+ DL F L D
Sbjct: 213 DGSSREVVVKGDLPHPFALTLYED 236
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 139/303 (45%), Gaps = 42/303 (13%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
C H G CS+ C P G C CP G E+++ DM C P +T
Sbjct: 595 CAHSNGGCSHLCLFKPQGVQCGCPIGLELIA-------DMRTCIVPEAFLLFSRHTDIRR 647
Query: 92 ICSCNEGYVLEYDNHTCK----AINHSAA--FLIISNR---HSILVADLEEKGKDHRAQD 142
I LE +N+ + ++A F + NR I + + + A +
Sbjct: 648 IS-------LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALE 700
Query: 143 IVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
VV GLD EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP
Sbjct: 701 HVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDP 760
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
+ G +++WT+WG P+I+R MDGS R T+++ + NGLT+D A RR+Y+ D
Sbjct: 761 AEG--YMYWTEWGGKPKIDRAAMDGSGRITLVA-DVGRANGLTIDYAERRLYWTDLDTTL 817
Query: 262 IDCKSL----------EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
I+ ++ +++ + +YW D I +AN L+
Sbjct: 818 IESSNMLGQDREVIADDLQHPFGLTQYQDYIYWTDWSQR----SIERANKTSGQNRTLIQ 873
Query: 312 GQL 314
G L
Sbjct: 874 GHL 876
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 149/346 (43%), Gaps = 95/346 (27%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G CS +C + + SY C+C G L D TC+ + + L+++ R
Sbjct: 294 GGCSHLCLLSPSSPSYQCACPTGVQLLADGRTCR--DGATQVLLLARR------------ 339
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
+ L RI + + T+ IVL D+I
Sbjct: 340 --------------------------------TDLRRISLDTPDFTD-IVLQVDDIRHAI 366
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ DP G +++WTD + I R +DGS+ ++++++ P+G+ +D
Sbjct: 367 AIDYDPVDG--YIYWTD-DDVKAIRRSRLDGSDAQFVVTSQVNHPDGIAVDW-------- 415
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
I R LYW D G + +I ++G+ IL+S L
Sbjct: 416 ----------------------IARNLYWTDTGTD----RIEVTRLNGTMRKILISEDLD 449
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
E A+ L+ Y ++WTDWGE P+IER +DG R +++T + WPNGL L
Sbjct: 450 EPRAIVLDPVAGY---------MYWTDWGEVPKIERADLDGMERVVMVNTSLGWPNGLAL 500
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
D R++Y+ D+K D I+ + DGTGR+ ++ L F L+GD
Sbjct: 501 DYDERKIYWGDAKTDKIEVMHMDGTGRRVLVEDKLPHIFGFTLLGD 546
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 103/212 (48%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 645 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVE 704
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG + +LV L ALALD
Sbjct: 705 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVAKLDGQHRQVLVWKDLDSPRALALDP 760
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R T+++ + NGLT+D A RR+
Sbjct: 761 AEGYMY-----------WTEWGGKPKIDRAAMDGSGRITLVA-DVGRANGLTIDYAERRL 808
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D I+ N G R +VI DL F
Sbjct: 809 YWTDLDTTLIESSNMLGQDR-EVIADDLQHPF 839
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 147/359 (40%), Gaps = 75/359 (20%)
Query: 78 GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G+CS +C S++C C + L DN TC A +FL+ S + +I ++E+
Sbjct: 901 GHCSHLCLAVPVSSFVCGCPAHFSLNEDNKTCSA---PTSFLLFSQKTAINRMVIDEQ-- 955
Query: 137 DHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
++ DI+ + L V + YD + +YW+DS+ N I E+G + +
Sbjct: 956 --QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSKQNVIRRAQEDGNQSVTVVS------ 1007
Query: 195 RGMMLDPSPG-----------TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
G+M PS G +R+++WT N I DGS ++ + P +
Sbjct: 1008 -GLMGGPSQGIQLYDLSIDIYSRFIYWTSEVTNV-INVTRTDGSRVGVVLRGEQDKPRAI 1065
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
++ +YF TN+ + KI +A +DG
Sbjct: 1066 VVNPERGYMYF----------------TNLLERSP----------------KIERAALDG 1093
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+ +L L + +AL ++N + LFW D + RIE + G+NR I
Sbjct: 1094 TEREVLFFSGLGKPVALAIDNEVGK---------LFWVD-SDLRRIESSDLSGANRIVIA 1143
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+ I P GLT + + +Y+ D + I+ D T R+ + V + +D+ N
Sbjct: 1144 DSNILQPVGLT--VFGKHLYWIDKQQQMIE--RIDKTTREGRTKVQARVPYLSDIHAVN 1198
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 139/333 (41%), Gaps = 42/333 (12%)
Query: 128 VADLEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL 186
+ +E G D + +++ + GL D+ +YW D++ + I CD +G++R V+
Sbjct: 161 IPKIERAGMDGTNRSMIIDKEIYWPNGLTLDYGQQKLYWADAKHSFIHRCDLDGSSREVV 220
Query: 187 AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 246
K ++ P + L LFWTDW + I ++ I+ P + +
Sbjct: 221 VKGDLPHPFALTLYEDT----LFWTDWNTH-SIHSCSKHTGGEQRVVHANIFSPMDIHVF 275
Query: 247 IATRRVYFADSKLDFID---CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI-GKANMD 302
R+ S ++ C L + + + S + GV L G+ D
Sbjct: 276 SEERQNTPGASSPCLLNNGGCSHLCLLSPSSPS-------YQCACPTGVQLLADGRTCRD 328
Query: 303 GSNASILVSGQL-YEALALDLENGMLYYSTLKCTR------------WLFWTDWGENPRI 349
G+ +L++ + ++LD + + R +++WTD + I
Sbjct: 329 GATQVLLLARRTDLRRISLDTPDFTDIVLQVDDIRHAIAIDYDPVDGYIYWTD-DDVKAI 387
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
R +DGS+ ++++++ P+G+ +D R +Y+ D+ D I+ +GT R+ +I D
Sbjct: 388 RRSRLDGSDAQFVVTSQVNHPDGIAVDWIARNLYWTDTGTDRIEVTRLNGTMRKILISED 447
Query: 410 LMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
L + A+ LD G +Y++ G
Sbjct: 448 L-----------DEPRAIVLDPVAGYMYWTDWG 469
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 24/151 (15%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
L++ A + +NA+++V G L +A A+D +Y L ++W+D E I+R
Sbjct: 31 LRLVDAAHEKANATVVVGG-LEDAAAVDY----VYSQGL-----IYWSDVSEEA-IKRTV 79
Query: 354 MDGSNRSTI--ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
+ S T+ + + P+GL D R++Y+ DS+ + I+ DG+ R+ + +L
Sbjct: 80 FNQSGAHTVQTVIPGLASPDGLACDWLGRKLYWTDSETNRIEVAELDGSMRKILFWQEL- 138
Query: 412 VEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD E G +Y++ G
Sbjct: 139 ----------DQPRAIALDPERGFMYWTDWG 159
>gi|340713782|ref|XP_003395415.1| PREDICTED: very low-density lipoprotein receptor-like [Bombus
terrestris]
Length = 604
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 127/267 (47%), Gaps = 45/267 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L+ VC+ DC DE C + EC G CS C P+G C C G L
Sbjct: 339 CIPLSSVCNKNRDCIGWEDENEELCGVNECSKNNGGCSQICIDLPIGFRCDCNAGYRLI- 397
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D+ TC D++EC +PG CSQ C N K S+ C C GY + NHT CKA A+ L+ +
Sbjct: 398 DNRTCDDIDECLEPGRCSQFCLNEKSSFKCICAPGYFKDPRNHTRCKAAEGHAS-LLFTR 456
Query: 123 RHSILVADLEEKGKDHRAQD---------------------------------------I 143
RH I L+ + +D +
Sbjct: 457 RHDIRKVALDRLEMTNIVKDTKMAAALDFVFRTGMIFWSDSSEKKIYKAPIDEGNERTVV 516
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ GL +GLA DWI HIYW DS+ + IE+ + G R L +D + +PR + L+P
Sbjct: 517 IDDGLTTSDGLAVDWIYSHIYWTDSKKSTIELANFEGNMRKTLIQDRVQEPRAIALNPLE 576
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRS 230
G W+FWTDW + RIE+ GMDGS+R+
Sbjct: 577 G--WMFWTDWSDEARIEKAGMDGSHRT 601
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 11/100 (11%)
Query: 307 SILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 366
+I+ ++ AL GM+ FW+D E + +G+ R+ +I
Sbjct: 472 NIVKDTKMAAALDFVFRTGMI-----------FWSDSSEKKIYKAPIDEGNERTVVIDDG 520
Query: 367 IYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ +GL +D +Y+ DSK I+ N++G R+ +I
Sbjct: 521 LTTSDGLAVDWIYSHIYWTDSKKSTIELANFEGNMRKTLI 560
>gi|260823876|ref|XP_002606894.1| hypothetical protein BRAFLDRAFT_126357 [Branchiostoma floridae]
gi|229292239|gb|EEN62904.1| hypothetical protein BRAFLDRAFT_126357 [Branchiostoma floridae]
Length = 1296
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 141/323 (43%), Gaps = 71/323 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSN---TCHPTPLGALCTCPPGEI 60
C++ T VCDG DC N ADE C K CS C P C E
Sbjct: 421 ECIHETWVCDGDGDCSNIADEM-DCAAEPPTQKEKDCSAGYFRCEPN------GCISEER 473
Query: 61 LSNDSVTCQD--------MNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN 112
+ + V C+D ++EC PGYCSQ+C N G Y CSC GY L+ C A
Sbjct: 474 ICDGQVDCEDASDEQDCDLDECGVPGYCSQLCENGFGVYSCSCLGGYELQTGGK-CVASG 532
Query: 113 HSAAFLIISNRHSIL--------------------------------------------- 127
+LI+SNR I+
Sbjct: 533 QEP-YLIVSNRREIVRLNVRTMSKTVILTKDLRSVIAVDVDVARGRLFWTDVGTQKINSA 591
Query: 128 ---VADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
D +E D Q I S + + +G+A DW+ GH+YW D+ L+ I V +G R
Sbjct: 592 ALPPVDAKEAAADD-VQTIFSSDVSIPDGIAVDWVYGHVYWTDTGLDTISVGTMDGAWRK 650
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L + +PR +++DP G ++WTDWG +P+IER MDG R I+ I WPNGL
Sbjct: 651 TLVDTGLKEPRAIVVDPEQGL--MYWTDWGSDPKIERAWMDGQQREVIVGDNITWPNGLA 708
Query: 245 LDIATRRVYFADSKLDFIDCKSL 267
+D +RR+++ D K ++ +L
Sbjct: 709 IDYVSRRLFWLDGKKGTLESSNL 731
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 50/231 (21%)
Query: 135 GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQ 193
G + I +GLA DWI ++YW ++ I V + +NG R L K+++ +
Sbjct: 1045 GSEEPPTGIFTGKNSTFDGLAVDWIHQNLYWTETMGEAICVMNLQNGRWR-TLIKEDVKR 1103
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
P + LDP G W+++ DW IER+GMDG R II+ +I WP+GL +D +R+++
Sbjct: 1104 PFAIALDPIDG--WVYFADWAYPASIERVGMDGWERRAIITEQIIWPSGLAIDFHSRKLF 1161
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV-SG 312
++D+K+D I W ++MDG N I+V S
Sbjct: 1162 WSDAKIDSI---------------------W-------------SSDMDGKNRRIIVGSR 1187
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+L LALD+ LFW DW + G+ +S +I
Sbjct: 1188 RLSRPLALDILQDT-----------LFWMDWDVDSVKRVDKKTGTQKSLLI 1227
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 17/131 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
I + LYW + G + + N+ L+ + A+ALD +G
Sbjct: 1069 IHQNLYWTETMGEAICV----MNLQNGRWRTLIKEDVKRPFAIALDPIDG---------- 1114
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
W+++ DW IER+GMDG R II+ +I WP+GL +D +R+++++D+K+D I
Sbjct: 1115 -WVYFADWAYPASIERVGMDGWERRAIITEQIIWPSGLAIDFHSRKLFWSDAKIDSIWSS 1173
Query: 396 NYDGTGRQQVI 406
+ DG R+ ++
Sbjct: 1174 DMDGKNRRIIV 1184
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 68/157 (43%), Gaps = 27/157 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN-------P 347
+I + N+ + +++++ L +A+D++ LFWTD G P
Sbjct: 544 EIVRLNVRTMSKTVILTKDLRSVIAVDVDVARGR---------LFWTDVGTQKINSAALP 594
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
++ + TI S+ + P+G+ +D VY+ D+ LD I DG R+ ++
Sbjct: 595 PVDAKEAAADDVQTIFSSDVSIPDGIAVDWVYGHVYWTDTGLDTISVGTMDGAWRKTLVD 654
Query: 408 IDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAE 444
L A+ +D E G++Y++ G++
Sbjct: 655 TGLKEPR-----------AIVVDPEQGLMYWTDWGSD 680
>gi|198429585|ref|XP_002120725.1| PREDICTED: similar to alpha-2-macroglobulin receptor [Ciona
intestinalis]
Length = 989
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 176/411 (42%), Gaps = 115/411 (27%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHK-FGLCSNTCHPTPLGALCTCPPGEILSN 63
C+NL+K C+ +DC +GADE C + EC++K C C C C PG LS
Sbjct: 52 CINLSKACNNVSDCTDGADEK-LCFVNECENKQSNRCQQLCINRDYSYKCGCRPGFQLST 110
Query: 64 DSVTCQDMNECEQ-PGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSA-AFLII 120
D +C ++NEC CSQ+C +Y CSC Y + + CKA +H+ +++
Sbjct: 111 DGYSCSEINECAHIVPPCSQICEKYPNTYECSCAPSYYRDPLNRRNCKAGSHTGEPYILF 170
Query: 121 SNRH------------SILVADLEE----------------------------------- 133
+N + S+ +A L
Sbjct: 171 ANEYFLRQLSLNGSNYSLRLAHLSHMTALDFDWSGQKLYWSDTTRSGSSIQRMNLNKTFH 230
Query: 134 -----KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK 188
G D + + L V+GLA DWIG +IYW + N IEV +G+ R VL +
Sbjct: 231 PSDFGPGSDQSGIETIHQSLQKVDGLAVDWIGRNIYWSERDKNTIEVSKLDGSFRKVLVR 290
Query: 189 DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY---------- 238
+ +P+ + L P G +L+W+DWG +P I +IGMDG++RS II +I
Sbjct: 291 SGLEEPQAIALLPDKG--YLYWSDWGSDPHIGKIGMDGTDRSVIIHNRILGQQTSHSWPG 348
Query: 239 ----WPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
WPN LT+D A R++++AD+K +
Sbjct: 349 AALGWPNALTIDYAARKLFWADAKEGY--------------------------------- 375
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
I ++DG+NA+I+V + D + ++ +L ++WTDW +
Sbjct: 376 -IAHCDLDGANAAIVVQ-------SPDNRDSRIFSISLF-EDSIYWTDWSQ 417
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 27/156 (17%)
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
+SL+ + I R +YW + N + + + +DGS +LV L E A+ L
Sbjct: 248 QSLQKVDGLAVDWIGRNIYWSERDKNTIEV----SKLDGSFRKVLVRSGLEEPQAIAL-- 301
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY--------------WP 370
L +L+W+DWG +P I +IGMDG++RS II +I WP
Sbjct: 302 -------LPDKGYLYWSDWGSDPHIGKIGMDGTDRSVIIHNRILGQQTSHSWPGAALGWP 354
Query: 371 NGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
N LT+D A R++++AD+K +I C+ DG V+
Sbjct: 355 NALTIDYAARKLFWADAKEGYIAHCDLDGANAAIVV 390
>gi|1817731|gb|AAB42184.1| low-density lipoprotein receptor [Chiloscyllium plagiosum]
Length = 857
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 174/411 (42%), Gaps = 105/411 (25%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + KVCD DC + +DE C EC ++ G CS+ C +G C C PG L
Sbjct: 288 ECIMMDKVCDSHRDCRDWSDEPLKECGENECLNENGGCSHICKDLKIGYKCLCRPGFRLI 347
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D+ C+D++ECE P CSQ C N +G + C C EGY ++ CKAI + +L +N
Sbjct: 348 -DNAKCEDIDECENPDTCSQNCINLEGGFKCECKEGYQMDPMTRQCKAIG-TVGYLFFTN 405
Query: 123 RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
R D V L D + W+ N + + E N
Sbjct: 406 R-------------------------DEVRKLTLD-RSEYTQWIPRLKNVVALDMEVAAN 439
Query: 183 RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD----GSNRSTIISTKIY 238
+I +W D + +I MD S+ ST+I T+I
Sbjct: 440 KI------------------------YWADLFQK-KIFSAHMDQTENSSHHSTVIETEIQ 474
Query: 239 WPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGK 298
P+GL +D I + +YW D + I
Sbjct: 475 APDGLAVDW------------------------------IHQNIYWTD----FLTSTISV 500
Query: 299 ANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG 356
AN G+ +L+ QL + A+A+D +G LY W+DWG +IE+ G++G
Sbjct: 501 ANTAGTKRKVLIKEQLSKPRAIAVDPVHGFLY-----------WSDWGSPAKIEKGGLNG 549
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+R +++ I WPNG+TLD+ +R+Y+ DSKL + G R+ +I+
Sbjct: 550 VDRYPLVTENIEWPNGITLDLVNQRLYWVDSKLHTLSSIGVAGDNRKTLII 600
>gi|410967312|ref|XP_003990164.1| PREDICTED: low-density lipoprotein receptor-related protein 8
[Felis catus]
Length = 724
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 147/306 (48%), Gaps = 55/306 (17%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGC--DLAECK-HKFGLCSNTCHPTPLGALCTCPP 57
+ +CV + CDG+ DC +GADE GC L C+ +F TC PT C
Sbjct: 128 ASHKCVPASWRCDGEKDCESGADEA-GCATSLGTCRGDEFQCGDGTCVPTI--KRCNQEQ 184
Query: 58 GEILSNDSVTC-QDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA 115
+ +D C Q +NEC G CS +CT+ K + C+C GY L D TC A +
Sbjct: 185 DCLDGSDEAGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGYQL-LDQKTCGA--GRS 241
Query: 116 AFLIISNRHSILVADL-----------------------------------------EEK 134
LI +NRH + DL +K
Sbjct: 242 PSLIFTNRHEVRRIDLVKRDYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDK 301
Query: 135 GKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
D Q++++ L EGLA DW+ HIYW DS I V +G+ R L ++++
Sbjct: 302 ASDLAEQEVLIDKQLHSPEGLAVDWVHKHIYWTDSGNKTISVATIDGSRRCTLFSRDLSE 361
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
PR + +DP G +++W+DWG +IE+ G++G +R T++S I WPNG+TLD+ +R+Y
Sbjct: 362 PRAIAVDPLRG--FMYWSDWGYQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLNQRLY 419
Query: 254 FADSKL 259
+ DSKL
Sbjct: 420 WVDSKL 425
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 29/184 (15%)
Query: 232 IISTKIYWPNGLTLDIATRRVYFA--DSKLDFIDC-----KSLEIKTNVNYSTIFRKLYW 284
+ + +IYW D++ R++Y A D D + K L + + + +YW
Sbjct: 279 VATNRIYW-----CDLSYRKIYSAYMDKASDLAEQEVLIDKQLHSPEGLAVDWVHKHIYW 333
Query: 285 IDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTD 342
D G I A +DGS L S L E A+A+D G +Y W+D
Sbjct: 334 TDSGNK----TISVATIDGSRRCTLFSRDLSEPRAIAVDPLRGFMY-----------WSD 378
Query: 343 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
WG +IE+ G++G +R T++S I WPNG+TLD+ +R+Y+ DSKL + + G R
Sbjct: 379 WGYQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLNQRLYWVDSKLHQLSSIDLSGGNR 438
Query: 403 QQVI 406
+ +I
Sbjct: 439 KMLI 442
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL--AKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D +G NR +L + D ++ P G+
Sbjct: 396 QTLVSDNIEWPNGITLDLLNQRLYWVDSKLHQLSSIDLSGGNRKMLISSPDFLSHPFGIA 455
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 456 VFEDK----VFWTD 465
>gi|171362739|dbj|BAG14342.1| vitellogenin receptor [Haemaphysalis longicornis]
Length = 1781
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 155/343 (45%), Gaps = 55/343 (16%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
+ C+ ++VCD DC + +DE C+ C G C++ C +PLG C+C PG L
Sbjct: 1173 SKECIPWSRVCDMHLDCADYSDESSHCE-THCGTANGGCAHICRESPLGPQCSCHPGYRL 1231
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII- 120
+ DS C D++EC PG+CS C N+KGSY C+C +GY L D+ +CK + H AFL+
Sbjct: 1232 NADSKACDDVDECGTPGHCSHFCQNSKGSYKCTCADGYSLAADHRSCK-VQHGEAFLLYM 1290
Query: 121 ------------SNRHSILVADLEEK-GKDHRAQDIVVSGLDLVEG-------------- 153
+H + D + G D+R D + ++ EG
Sbjct: 1291 LPNQIRSFSMRGHAQHILARDDFSDMYGMDYRVADKSIYWTEMDEGTINVMTLGNGKHFT 1350
Query: 154 ----------LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+A DW+ ++Y+ D ++ I+ C+ + + L +
Sbjct: 1351 LLEQIYKPFHIAVDWVANNVYFTDGWVH-IQACEPTFKHCADVVDTTYPHVNSFTLAAND 1409
Query: 204 GTR-WLFWTDWGENPR--IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
G W W D P IER MDG+ R+ +++ KI WP +T+D + +Y+AD+ +
Sbjct: 1410 GLMFWAVWMDVVRQPHGLIERANMDGTARTILLTDKILWPCSVTVDAVHKLIYWADANKN 1469
Query: 261 FIDCKSLEIKTN-----VNYSTIFRK------LYWIDEGGNGV 292
++ + + K V S+ F LYW D G + +
Sbjct: 1470 ILESATYDGKNRNTVLGVGISSPFSIALFQDWLYWSDWGSDSI 1512
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 142/308 (46%), Gaps = 67/308 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C+ +KVCDG+ DC G C G+ C C G L
Sbjct: 165 QCLLRSKVCDGRKDCSEG----------------------CFVATNGSTCYCNTGFGLMA 202
Query: 64 DSVTCQDMNECE-QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL---- 118
D ++C D++EC +P CS CTN+ GSY C C EGY L D CKA + L
Sbjct: 203 DHISCADVDECAVEPYVCSHGCTNSPGSYSCHCLEGYQLA-DKCFCKARDPEPRLLYSNT 261
Query: 119 -------IISNRH-SILVADLEEKGKDHRAQD-------------IVVSG---------- 147
+ SNR+ I A+ + G + ++ V SG
Sbjct: 262 KEFRGLWLRSNRYFDIHPAEAQAVGVEFDSEQRRVYWTDVPTLKSSVYSGRLDGSGLKSL 321
Query: 148 ----LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
L L+E L+ DW+ ++Y DS + RI VC +G + + D+I R ++++P+
Sbjct: 322 FSAELTLLEDLSLDWVTNNLYITDSLVKRIVVCTTDGLSCSAVITDSIDSRRAIIVNPAR 381
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
T ++WTDW P + MDG+N ++ST WPNGLTLD T R+Y+ D+KL +
Sbjct: 382 KT--MYWTDWSAQPAVMHSIMDGTNVGQLVSTDRGWPNGLTLDHTTNRLYWCDAKLSRL- 438
Query: 264 CKSLEIKT 271
+ LE+ T
Sbjct: 439 -QYLELST 445
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 99/478 (20%), Positives = 164/478 (34%), Gaps = 121/478 (25%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNT-------------------- 43
C+ +CDG DC +G DE C A C C T
Sbjct: 1084 HCIYAHDLCDGFADCHSGRDES-NCTSAICHSAQFFCPYTKRCILQSWLCDGDDDCGDNM 1142
Query: 44 ------CHPTPLGALCT----------------CPPGEILSNDSVTCQDMNE----CEQP 77
CHPT + T C P + + + C D ++ CE
Sbjct: 1143 DELLPICHPTTPSPIATTDSACWSDEFRCGSKECIPWSRVCDMHLDCADYSDESSHCETH 1202
Query: 78 -----GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN------HSAAFLIISN-RHS 125
G C+ +C + CSC+ GY L D+ C ++ H + F S +
Sbjct: 1203 CGTANGGCAHICRESPLGPQCSCHPGYRLNADSKACDDVDECGTPGHCSHFCQNSKGSYK 1262
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
AD DHR+ + G + L N+I G + +
Sbjct: 1263 CTCADGYSLAADHRSCKVQ---------------HGEAFLLYMLPNQIRSFSMRGHAQHI 1307
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
LA+D+ + GM D + ++WT+ E + G+ + + +IY P + +
Sbjct: 1308 LARDDFSDMYGM--DYRVADKSIYWTEMDEG--TINVMTLGNGKHFTLLEQIYKPFHIAV 1363
Query: 246 DIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305
D VYF D + C+ T + +
Sbjct: 1364 DWVANNVYFTDGWVHIQACEPTFKHCADVVDTTYPHV----------------------- 1400
Query: 306 ASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR--IERIGMDGSNRSTII 363
+ L +G+++ W W D P IER MDG+ R+ ++
Sbjct: 1401 ----------NSFTLAANDGLMF--------WAVWMDVVRQPHGLIERANMDGTARTILL 1442
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+ KI WP +T+D + +Y+AD+ + ++ YDG R V+ + + F+ L D
Sbjct: 1443 TDKILWPCSVTVDAVHKLIYWADANKNILESATYDGKNRNTVLGVGISSPFSIALFQD 1500
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 97/242 (40%), Gaps = 50/242 (20%)
Query: 80 CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHR 139
C +C + SY C C Y L D +C + F++++ + D++ G R
Sbjct: 525 CHHICVLSGNSYTCLCRIRYKLLADKRSC-TVTKDFGFVVVAEEDLLYNFDIDRVGPPLR 583
Query: 140 AQDIVVSGLDLVEGLAYDW---------------------------IGGH---------- 162
+ S L ++ LA+DW + H
Sbjct: 584 VA-LPFSNLGMISALAFDWSNQTLHYSDNRHEMLSAINVNTFDQWTVHDHNGSVFGMDFD 642
Query: 163 -----IYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP 217
+YW+D+ +EVC G+ ++ +D++ +P + L P P LF G+ P
Sbjct: 643 DAHQLLYWVDADSYTLEVCRAIGSGHAII-RDDLRRP--VPLAPYPFAGILFVLCAGDAP 699
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST 277
I MDG + + + P L++D+ ++ +AD+ I+ SL+++ N+ +T
Sbjct: 700 TITSYTMDGQSPRILRLATLLLPVSLSVDLVAPKLVWADATRGTIE--SLDLR-NLFSAT 756
Query: 278 IF 279
F
Sbjct: 757 PF 758
>gi|390362926|ref|XP_003730258.1| PREDICTED: low-density lipoprotein receptor-related protein 4-like,
partial [Strongylocentrotus purpuratus]
Length = 1211
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 156/344 (45%), Gaps = 58/344 (16%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQP-GYCSQMCTNTKGS 90
EC G CS+TC +G +CTC L N++ C D+NEC+ G CSQ C N GS
Sbjct: 293 ECLTNNGGCSHTCLYLAIGHVCTCNASYALVNET-QCVDINECKTTLGICSQRCYNLPGS 351
Query: 91 YICSCNEGYVLEYDNHT--CKA-INHSAAFLIISNRHSILVADLEEKGKDH--------- 138
Y C C+E Y LE+ N CKA A L+ISNR I + DL +D+
Sbjct: 352 YKCDCDENYTLEHVNGRGHCKANPEFGAPKLLISNRLDIRIFDLSTSSEDYIKRSLHSAM 411
Query: 139 --------------------------RAQD-----IVVSGLDLVEGLAYDWIGGHIYWLD 167
+A++ IV + + +G+A DWI +YW D
Sbjct: 412 AVEFDSASNTVFWTDVGLEVVAKTQLQAENEVEPVIVTDKVKIPDGIAVDWINRLLYWTD 471
Query: 168 SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227
+ ++ I V + GT VL N+ +P + +DP G +FW+DWG IER GM+G
Sbjct: 472 TGVDNIVVSNFEGTRHTVLISSNLDEPLAIAVDPESG--LMFWSDWGLE-VIERAGMNGQ 528
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDE 287
R+ I++ + WPNGLTLD +Y+ D+K I ++VN+ R++ +
Sbjct: 529 GRTAIVTEGVSWPNGLTLDYTLDILYWIDAKEKSI--------SSVNFMGGNRRVVVAGQ 580
Query: 288 GGNGVPLKIG--KANMDGSNASILVSGQLYEALALDLENGMLYY 329
G P I K G S L +LAL + L Y
Sbjct: 581 GRIWHPFSIAVLKITSIGQTGPRRASNGLTSSLALTRQLSSLEY 624
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 87/194 (44%), Gaps = 48/194 (24%)
Query: 172 RIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRST 231
+I++ + GT VL N+ +PR + +DP G +FW+DWG IER GM+G R+
Sbjct: 850 KIKIAGKPGTRHTVLISSNLDEPRAIAVDPESG--LMFWSDWGLG-VIERAGMNGQGRTA 906
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
I++ + WPNGLTLD +Y+ D+K I C
Sbjct: 907 IVTEGVSWPNGLTLDYTLDMLYWIDAKESSISC--------------------------- 939
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
+ G N ++V+GQ + +S +++WTDW + IER
Sbjct: 940 -------VDFMGGNRRVVVAGQGRISHP---------FSIAVFEDYIYWTDWTKE-SIER 982
Query: 352 I-GMDGSNRSTIIS 364
GSN++TI+S
Sbjct: 983 ADKFTGSNQTTILS 996
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 14/114 (12%)
Query: 295 KIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
KI A G+ ++L+S L E A+A+D E+G++ FW+DWG IER
Sbjct: 850 KIKIAGKPGTRHTVLISSNLDEPRAIAVDPESGLM-----------FWSDWGLG-VIERA 897
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
GM+G R+ I++ + WPNGLTLD +Y+ D+K I ++ G R+ V+
Sbjct: 898 GMNGQGRTAIVTEGVSWPNGLTLDYTLDMLYWIDAKESSISCVDFMGGNRRVVV 951
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 68/136 (50%), Gaps = 21/136 (15%)
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTKIYWPN 371
L+ A+A++ ++ + +FWTD G E ++ + I++ K+ P+
Sbjct: 406 SLHSAMAVEFDSA---------SNTVFWTDVGLEVVAKTQLQAENEVEPVIVTDKVKIPD 456
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDL 431
G+ +D R +Y+ D+ +D I N++GT R V++ + E A+A+D
Sbjct: 457 GIAVDWINRLLYWTDTGVDNIVVSNFEGT-RHTVLISSNLDEPL----------AIAVDP 505
Query: 432 ENGMLYYSTEGAEFLK 447
E+G++++S G E ++
Sbjct: 506 ESGLMFWSDWGLEVIE 521
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 131 LEEKGKDHRAQD-IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLA 187
+E G + + + IV G+ GL D+ +YW+D++ + I D G NR +V
Sbjct: 894 IERAGMNGQGRTAIVTEGVSWPNGLTLDYTLDMLYWIDAKESSISCVDFMGGNRRVVVAG 953
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 234
+ I+ P + + +++WTDW + IER GSN++TI+S
Sbjct: 954 QGRISHPFSIAV----FEDYIYWTDWTKE-SIERADKFTGSNQTTILS 996
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 8/132 (6%)
Query: 130 DLEEKGK-----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
DLE K K R ++ S LD +A D G ++W D L IE NG R
Sbjct: 846 DLETKIKIAGKPGTRHTVLISSNLDEPRAIAVDPESGLMFWSDWGLGVIERAGMNGQGRT 905
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
+ + ++ P G+ LD + L+W D E+ I + G NR +++ + + +
Sbjct: 906 AIVTEGVSWPNGLTLDYT--LDMLYWIDAKES-SISCVDFMGGNRRVVVAGQGRISHPFS 962
Query: 245 LDIATRRVYFAD 256
+ + +Y+ D
Sbjct: 963 IAVFEDYIYWTD 974
>gi|321474872|gb|EFX85836.1| hypothetical protein DAPPUDRAFT_237406 [Daphnia pulex]
Length = 1305
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/337 (33%), Positives = 151/337 (44%), Gaps = 64/337 (18%)
Query: 11 VCDGKTDCPNGADE---GPG------CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
VCDG TDC +G+DE GPG C L E L T P+ C
Sbjct: 164 VCDGVTDCADGSDEKECGPGSFMNHNCLLPEHGWFSCLSKGTKKCMPISRACDGYADCDD 223
Query: 62 SNDSVTCQDMNECEQ-PGYCSQMCTNTKGSYICSCNEGYVL-EYDNHTCKAINHSAAFLI 119
D +++EC P CSQ C N +G + CSC+ GY + +N +C A LI
Sbjct: 224 RADEGGQCNIDECSMDPPMCSQKCANNRGGFECSCSSGYTVGTRNNRSCVANGPEPILLI 283
Query: 120 ISNR----------------------HSILVADLE-------EKGKDHRA---------- 140
+NR HS+ AD E EK KD
Sbjct: 284 TTNRDIRYTSLPSKEYGLVRSGISQAHSV-AADYEDGVVYWNEKSKDKAGIYKSMLDGSA 342
Query: 141 -QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
Q V G+++VE LA DW+G HIY+ DS I VCD T V+ + +PR + +
Sbjct: 343 FQYAVSVGVEIVEDLAIDWVGRHIYFADSGRKHIVVCDYRATICSVVISGKLDKPRAVAV 402
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P LFW+DWG +P I GMDGS R+ II+ I WPNGL +D +R+Y+ D+KL
Sbjct: 403 YPEESM--LFWSDWGSSPHIGSAGMDGSQRTNIITKDIIWPNGLVVDETIQRIYWGDAKL 460
Query: 260 DFI--------DCKSLEIKTNVNYST-IFRK-LYWID 286
+ I D K L +K Y+ IF ++W D
Sbjct: 461 NRIESSRIDGSDRKILPVKVTHPYALDIFENTIFWCD 497
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 124/297 (41%), Gaps = 24/297 (8%)
Query: 80 CSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
CS +C + + Y C+C G + D C++I+ + ++I+ I + GK+
Sbjct: 548 CSHLCLLSPSVPGYKCACPVGMTVNKDGRNCESISAHESSIVIATFTDIYRMTHHQIGKN 607
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+ + ++ + LAY+ +G I + D I D + + VL +N+ G
Sbjct: 608 SIFR-LPTRNVENIGALAYNPLGPSIVYSDMIQRTIYSFDLDTYRQTVLF-ENVDMVEG- 664
Query: 198 MLDPSPGTRWLFWTDWGENPRIE-RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
LD P T ++WT+ + + DG ++ +Y P G+T+ + R++ +
Sbjct: 665 -LDVDPFTENIYWTEVTRGTVVVGQKNHDGGYDRLVLVRNLYSPQGITIGSTSGRMFIVE 723
Query: 257 SKLDFIDCKSLEIKTNVN-----YSTIF------RKLYWIDEGGNGVPLKIGKANMDGSN 305
++ + TN Y T+ + LY+ D + I + ++G N
Sbjct: 724 GRISHVISVWHMDGTNRQELVQVYGTVSAMAYDGKHLYFSD----SLRGTIERIEVNGEN 779
Query: 306 ASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
IL S L +A+D+ +++ T TR + W + + + +D S T+
Sbjct: 780 RIILRS-HLGTPVAMDVSADSVFWLTQSSTR-ISWLNKQDPKTVRGFVIDASENMTV 834
>gi|47209732|emb|CAF90682.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1685
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 130/277 (46%), Gaps = 27/277 (9%)
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
H Q V+ GL +GLA DW+G +YW DS NRIEV + +G+ R VL + QPR +
Sbjct: 86 HSVQ-TVIPGLASPDGLACDWLGSKLYWTDSETNRIEVAELDGSLRKVLFWQELDQPRAI 144
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
LDP G +++WTDWGE P+IER GMDG+NRS II T IYWPNGLTLD +++Y+AD+
Sbjct: 145 ALDPERG--FMYWTDWGEIPKIERAGMDGTNRSMIIDTDIYWPNGLTLDYQQQKLYWADA 202
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
K FI L+ + + GVP+ + ++V L
Sbjct: 203 KHSFIHRCDLDGSSRYGSAPTCAGTLRTVATETGVPIVLPVFR------EVVVKDDLPHP 256
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
AL LY T LFWTDW + I ++ I+ P + +
Sbjct: 257 FAL-----TLYEDT------LFWTDWNTH-SISTCSKHTGGEQRVVHANIFSPMDIHVFS 304
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
R+ S C D G + L+ + F
Sbjct: 305 GKRQNTLVSSP------CRVDNGGCSHLCLLSPLEPF 335
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 150/351 (42%), Gaps = 66/351 (18%)
Query: 31 AECKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK 88
+ C+ G CS+ C +PL C CP G L D +C+D P N +
Sbjct: 314 SPCRVDNGGCSHLCLLSPLEPFYQCACPTGVQLLADGKSCRDGGSPGSPPLLFVSTLNPR 373
Query: 89 GSYICSCNE---------------GYVLEYDN-HTCKAINHSAAFLIISNRHSILVADLE 132
+ + VL+ D+ AI++ I ++ A
Sbjct: 374 ATQVLLLARRADLRRISLDTPDFTDIVLQVDDIRHAIAIDYDPVDGYIYWTDDVVKAIRR 433
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
+ AQ +V S ++ +G+A DWI ++YW D+ +RIEV NGT R +L +++
Sbjct: 434 SRLDGSDAQFVVTSQVNHPDGIAVDWIARNLYWTDTGTDRIEVTRLNGTMRKILISEDLD 493
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
+PR ++LDP G +++WTDWGE P+IER +DG R +++T + WPNGL LD R++
Sbjct: 494 EPRAIVLDPVAG--YMYWTDWGEVPKIERADLDGMERLVMVNTSLGWPNGLALDYQERKI 551
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+ D+K D KI +MDG+ +LV
Sbjct: 552 YWGDAKTD----------------------------------KIEVMDMDGTGRRVLVED 577
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+L L +Y WTDW + IER+ + R II
Sbjct: 578 KLPHIFGFTLLGDFIY-----------WTDW-QRRSIERVHKHTAEREFII 616
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 136/304 (44%), Gaps = 43/304 (14%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
C G CS+ C P G C CP G E+++ DM C P +T
Sbjct: 639 CGDSNGGCSHLCLFKPRGVQCGCPIGLELIA-------DMKTCIVPEAFLLFSRHTDIRR 691
Query: 92 ICSCNEGYVLEYDNHTCKAINHSAA-------FLIISNR---HSILVADLEEKGKDHRAQ 141
I LE +N+ AI + F + NR I + + + A
Sbjct: 692 IS-------LETNNNNNVAIPLTGVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSAL 744
Query: 142 DIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ VV GLD EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LD
Sbjct: 745 EHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALD 804
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WT+WG P+I+R MDGS R T+++ + NGLT+D A RR+Y+ D
Sbjct: 805 PAEG--YMYWTEWGGKPKIDRAAMDGSGRITLVA-DVGRANGLTIDYAERRLYWTDLDTT 861
Query: 261 FIDCKSL----------EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
I+ ++ ++ + +YW D I +AN L+
Sbjct: 862 LIESSNMLGQEREVIADDLPHPFGLTQYQDYIYWTDWSQR----SIERANKTSGQNRTLI 917
Query: 311 SGQL 314
G L
Sbjct: 918 QGHL 921
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 122/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL D+I + DP G +++WTD I R +DGS+
Sbjct: 386 LRRISLDTPDFTD-IVLQVDDIRHAIAIDYDPVDG--YIYWTD-DVVKAIRRSRLDGSDA 441
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
++++++ P+G+ +D I R LYW D G
Sbjct: 442 QFVVTSQVNHPDGIAVDW------------------------------IARNLYWTDTGT 471
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ Y ++WTDWGE P+I
Sbjct: 472 D----RIEVTRLNGTMRKILISEDLDEPRAIVLDPVAGY---------MYWTDWGEVPKI 518
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DG R +++T + WPNGL LD R++Y+ D+K D I+ + DGTGR+ ++
Sbjct: 519 ERADLDGMERLVMVNTSLGWPNGLALDYQERKIYWGDAKTDKIEVMDMDGTGRRVLVEDK 578
Query: 410 LMVEFTNDLMGD 421
L F L+GD
Sbjct: 579 LPHIFGFTLLGD 590
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 103/213 (48%), Gaps = 34/213 (15%)
Query: 219 IERIGMDGSNRS--TIISTKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--I 269
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE +
Sbjct: 689 IRRISLETNNNNNVAIPLTGVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVV 748
Query: 270 KTNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALD 321
+ ++Y + + LYW D G N +I A +DG + +LV L ALALD
Sbjct: 749 EFGLDYPEGMAVDWLGKNLYWADTGTN----RIEVAKLDGQHRQVLVWKDLDSPRALALD 804
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 381
G +Y WT+WG P+I+R MDGS R T+++ + NGLT+D A RR
Sbjct: 805 PAEGYMY-----------WTEWGGKPKIDRAAMDGSGRITLVA-DVGRANGLTIDYAERR 852
Query: 382 VYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
+Y+ D I+ N G R +VI DL F
Sbjct: 853 LYWTDLDTTLIESSNMLGQER-EVIADDLPHPF 884
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 141/359 (39%), Gaps = 76/359 (21%)
Query: 78 GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G+CS +C S++C C + L DN TC A +FL+ S + +I ++E+
Sbjct: 946 GHCSHLCLAVPVSSFVCGCPAHFSLNDDNKTCSA---PTSFLLFSQKTAINRMVIDEQ-- 1000
Query: 137 DHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
++ DI+ + L V + YD + +YW+DS+ N I E+G + +
Sbjct: 1001 --QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSKQNVIRRAQEDGNQSVTVVS------ 1052
Query: 195 RGMMLDPSPG-----------TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
G+M PS G +R+++WT N I DGS ++ + P +
Sbjct: 1053 -GLMGGPSQGIQLYDLSIDIYSRFIYWTSEVTNA-INVTRTDGSRVGVVLRGEQDKPRAI 1110
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
++ +YF TN+ + KI +A +DG
Sbjct: 1111 VVNPERGYMYF----------------TNLLERSP----------------KIERAALDG 1138
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+ +L L + +AL ++N + LFW W R +NR I
Sbjct: 1139 TEREVLFFSGLGKPVALAIDNELGR---------LFWR-WTRTCRRTSTS-SRANRIVIA 1187
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+ I P GLT + +Y+ D + I+ D T R+ + V + +D+ N
Sbjct: 1188 DSNILQPVGLT--VFGSHLYWIDKQQQMIE--RIDKTTREGRTKVQARVPYLSDIHAVN 1242
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 24/151 (15%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER-- 351
L++ A + +NA+++V G L +A A+D +Y L ++W+D E I+R
Sbjct: 31 LRLVDAAQEKANATVVVGG-LEDAAAVD----YVYSQGL-----IYWSDVSEEA-IKRTV 79
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
G++ + + P+GL D ++Y+ DS+ + I+ DG+ R+ + +L
Sbjct: 80 FNQSGAHSVQTVIPGLASPDGLACDWLGSKLYWTDSETNRIEVAELDGSLRKVLFWQEL- 138
Query: 412 VEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD E G +Y++ G
Sbjct: 139 ----------DQPRAIALDPERGFMYWTDWG 159
>gi|321478350|gb|EFX89307.1| hypothetical protein DAPPUDRAFT_310287 [Daphnia pulex]
Length = 1713
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 155/340 (45%), Gaps = 65/340 (19%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C+++ CS+ C P P C CP G L D+ TC D +Q ++ + S
Sbjct: 295 CQNQNAKCSHLCLSAPYPPWFTCACPTGSKLV-DNFTCAD--GAQQLLLLARRTDLRRIS 351
Query: 91 YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG------KDHRAQDIV 144
VL D + H+ A + +D E +G + +D+V
Sbjct: 352 LDTPDYTDVVLPLD-----GVKHAIAVDYDPVDGYVYWSDDEVRGIRRAKLDGSQQEDVV 406
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
++ +D +G+A DWIG ++YW D+ +RIEV NGT R VL +N+ +PR + LDP G
Sbjct: 407 MAEVDHPDGIAVDWIGRNLYWTDTGTDRIEVARLNGTWRKVLISENLDEPRALALDPEVG 466
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
W+FWTDWG+ P+IER MDGS+R +++T + WPNG+ LD RR+Y+ D+K D
Sbjct: 467 --WMFWTDWGKEPKIERASMDGSDRVVLVNTSLGWPNGIALDYVQRRLYWCDAKTD---- 520
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
KI A+MDGS ++S + L
Sbjct: 521 ------------------------------KIEVADMDGSKRKEILSENVPHIFGFSLLG 550
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGM-DGSNRSTII 363
LY WTDW ++ IER+ G +R I+
Sbjct: 551 DFLY-----------WTDW-QHRSIERVHKWTGEDRKIIV 578
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 102/204 (50%), Gaps = 49/204 (24%)
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+++ +GL +GLA DW+G +YW DS NR+EV NG NR VL +++ QPR + L P
Sbjct: 95 NVITTGLVSPDGLAIDWLGNKLYWTDSETNRLEVSTLNGENRKVLFWEDLDQPRAICLFP 154
Query: 202 SPGTRWLFWTDWGENPRIERIGMDG--SNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G LFWTDWGENP+IE GM+G + R II +I+WPNGLT+D +++AD+KL
Sbjct: 155 KKGL--LFWTDWGENPKIESAGMNGDLTTRHVIIKDEIFWPNGLTIDYEEEAIFWADAKL 212
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
+ I C A++ G+N + G L A
Sbjct: 213 NII-C---------------------------------SASLTGANRRTVSQGDLQHPFA 238
Query: 320 LDLENGMLYYSTLKCTRWLFWTDW 343
L + +LY WTDW
Sbjct: 239 LTMYKNVLY-----------WTDW 251
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 127/254 (50%), Gaps = 51/254 (20%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ +VL D + + DP G +++W+D E I R +DGS +
Sbjct: 347 LRRISLDTPDYTD-VVLPLDGVKHAIAVDYDPVDG--YVYWSD-DEVRGIRRAKLDGSQQ 402
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
++ ++ P+G+ +D I R LYW D G
Sbjct: 403 EDVVMAEVDHPDGIAVDW------------------------------IGRNLYWTDTGT 432
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
+ +I A ++G+ +L+S L E ALALD E G W+FWTDWG+ P
Sbjct: 433 D----RIEVARLNGTWRKVLISENLDEPRALALDPEVG-----------WMFWTDWGKEP 477
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+IER MDGS+R +++T + WPNG+ LD RR+Y+ D+K D I+ + DG+ R++++
Sbjct: 478 KIERASMDGSDRVVLVNTSLGWPNGIALDYVQRRLYWCDAKTDKIEVADMDGSKRKEILS 537
Query: 408 IDLMVEFTNDLMGD 421
++ F L+GD
Sbjct: 538 ENVPHIFGFSLLGD 551
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 136/330 (41%), Gaps = 92/330 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK- 136
G CS +C N G Y+C+C GY L D C AFL+ + + I LE K
Sbjct: 606 GGCSHLCLNRPGKYVCACPIGYELTADEINCVI---PEAFLLFTRKEDIRRISLEANHKN 662
Query: 137 -------------------DHRA--------------------QDIVVSGLDLVEGLAYD 157
D+R + +V GL+ EG+A D
Sbjct: 663 VIIPIAGVKEASALDFDVNDNRIYWTDIGVKSISRAFMNGSNLEVVVEFGLEYPEGMAVD 722
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP 217
W+ +IYW D +R+EV +G++R VL ++ PR + LDP G +++ WG P
Sbjct: 723 WVAHNIYWADMGSHRVEVARLDGSSRRVLIWKDLKNPRSIALDPGEG--YMYLGVWGSVP 780
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST 277
IER G+DGS R T+++ + NGL +D A RR+Y+AD +D K +E
Sbjct: 781 HIERAGLDGSQRITLVN-GVGRVNGLVVDFADRRLYWAD-----VDGKHIE--------- 825
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRW 337
++DG ++VSG + + +G+ Y +
Sbjct: 826 --------------------SCDLDGKQRQVVVSGNMPQP------HGLTQYE-----EF 854
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKI 367
++W DW IER T I T++
Sbjct: 855 IYWADWTTR-SIERAHKQSGENRTRIQTQV 883
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 115/308 (37%), Gaps = 98/308 (31%)
Query: 78 GYCSQMC-------TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
G CS +C ++ C+C Y L DN TC A +FL+ S ++ I
Sbjct: 908 GGCSHLCLALPAGIVRQSHTHRCTCPTHYELVADNKTCVA---PKSFLLFSQKNYI--NR 962
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
L D + + GL V G+ +D +G H+YW+D R I +NGT V+ N
Sbjct: 963 LLPSSPDSPDVILPIRGLKQVRGIEFDPVGQHLYWIDGRSQTIRRALDNGTQASVVVA-N 1021
Query: 191 ITQ-------------------------------------------------PRGMMLDP 201
TQ PR + + P
Sbjct: 1022 PTQSLHPYDLAVEPYSRVLFWSCSRFNAINATRIDNHLSVGILVGGPSTSDKPRNLAVHP 1081
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G WLF+T+ RIER +DGS+R II T I P+ LT+D +++AD+ L
Sbjct: 1082 VKG--WLFFTNLVSPARIERCRLDGSDRVKIIETDIDQPSALTIDTEEEMIFWADTSLKV 1139
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A +DG+N L+S QL + +AL
Sbjct: 1140 IEV----------------------------------AALDGTNRRKLISSQLVQPIALT 1165
Query: 322 LENGMLYY 329
+ LY+
Sbjct: 1166 VHGRHLYW 1173
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 118/303 (38%), Gaps = 92/303 (30%)
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
+L+ +NR I + D + + I++ L+ L Y + G + W D L I
Sbjct: 24 WLLFANRKDIRLVDATQTRNRNNNVTIIIKDLEDAAALDYHYEKGMVCWTDISLEMIRCA 83
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 236
G N + N++ +I+T
Sbjct: 84 YHQGANLL-------------------------------------------NKTNVITTG 100
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI 296
+ P+GL +D ++Y+ DS+ + LE+ T
Sbjct: 101 LVSPDGLAIDWLGNKLYWTDSETN-----RLEVST------------------------- 130
Query: 297 GKANMDGSNASILVSGQLYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
++G N +L L + A+ L + G+L FWTDWGENP+IE GM
Sbjct: 131 ----LNGENRKVLFWEDLDQPRAICLFPKKGLL-----------FWTDWGENPKIESAGM 175
Query: 355 DG--SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+G + R II +I+WPNGLT+D +++AD+KL+ I + G R+ V DL
Sbjct: 176 NGDLTTRHVIIKDEIFWPNGLTIDYEEEAIFWADAKLNIICSASLTGANRRTVSQGDLQH 235
Query: 413 EFT 415
F
Sbjct: 236 PFA 238
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 112/269 (41%), Gaps = 58/269 (21%)
Query: 184 IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPN 241
++L + Q RG+ DP + L+W D G + I R +G+ S +++ T+ P
Sbjct: 973 VILPIRGLKQVRGIEFDPV--GQHLYWID-GRSQTIRRALDNGTQASVVVANPTQSLHPY 1029
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
L ++ +R ++++ S+ + I+ ++ +V
Sbjct: 1030 DLAVEPYSRVLFWSCSRFNAINATRIDNHLSVG--------------------------- 1062
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
ILV G +L + WLF+T+ RIER +DGS+R
Sbjct: 1063 ------ILVGGPSTSDKPRNL-------AVHPVKGWLFFTNLVSPARIERCRLDGSDRVK 1109
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
II T I P+ LT+D +++AD+ L I+ DGT R+++I L
Sbjct: 1110 IIETDIDQPSALTIDTEEEMIFWADTSLKVIEVAALDGTNRRKLISSQL----------- 1158
Query: 422 NGVPALALDLENGMLYYSTEGAEFLKTPL 450
V +AL + LY+ + ++ ++ L
Sbjct: 1159 --VQPIALTVHGRHLYWLEKDSQLIERAL 1185
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 129/313 (41%), Gaps = 38/313 (12%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V + L G+A D++ +YW D++ ++IEV D +G+ R + +N+ G L
Sbjct: 492 LVNTSLGWPNGIALDYVQRRLYWCDAKTDKIEVADMDGSKRKEILSENVPHIFGFSL--- 548
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+L+WTDW ++ IER+ II ++ GL T +
Sbjct: 549 -LGDFLYWTDW-QHRSIERVHKWTGEDRKIIVDQLPDLMGLKAINITEVRGTNPCAVGNG 606
Query: 263 DCKSLEIKTNVNYSTIFRKLYWI--DEGGNGVPLK---------IGKANMDGSNASILVS 311
C L + Y Y + DE +P I + +++ ++ ++++
Sbjct: 607 GCSHLCLNRPGKYVCACPIGYELTADEINCVIPEAFLLFTRKEDIRRISLEANHKNVIIP 666
Query: 312 -GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 370
+ EA ALD + ++WTD G I R M+GSN ++ + +P
Sbjct: 667 IAGVKEASALDFDVN---------DNRIYWTDIGVK-SISRAFMNGSNLEVVVEFGLEYP 716
Query: 371 NGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALD 430
G+ +D +Y+AD ++ DG+ R+ +I DL ++ALD
Sbjct: 717 EGMAVDWVAHNIYWADMGSHRVEVARLDGSSRRVLIWKDL-----------KNPRSIALD 765
Query: 431 LENGMLYYSTEGA 443
G +Y G+
Sbjct: 766 PGEGYMYLGVWGS 778
>gi|326671517|ref|XP_003199452.1| PREDICTED: low-density lipoprotein receptor-related protein 1-like,
partial [Danio rerio]
Length = 475
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 168/383 (43%), Gaps = 86/383 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C+ VCD DC +G+DE C+ CK C N G L
Sbjct: 59 QCIPKHFVCDHDNDCGDGSDESVECEYPACKANEFRCDN---------------GRCLIQ 103
Query: 64 DSVTCQDMNEC-----EQPGYCSQMCTNT-KGSYICSCNEGYV----LEYDNHTC--KAI 111
S C +C E P + C+ T + ++ N Y+ L+ N+T + +
Sbjct: 104 KSWECDGEFDCHDHSDEAPK--NPHCSGTDEEPFLIFANRYYLRKLNLDGSNYTLLKQGL 161
Query: 112 NHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLV--------EGLAYDWIGGHI 163
N++ A + I D+ +G R +I S + ++ +GLA DW+GG++
Sbjct: 162 NNAVALDFDYRQQMIYWTDVTTQGSMIRRMNINGSNVQVLHRTSLSNPDGLAVDWVGGNL 221
Query: 164 YWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIG 223
YW D + IEV NG R VL + +PR + +D G +L+W+DWG+ P I RIG
Sbjct: 222 YWCDKGRDTIEVSKLNGAYRTVLVNSGLREPRAVAVDVRNG--YLYWSDWGDIPHIGRIG 279
Query: 224 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLY 283
MDG+NRS I+ KI WPNGLTLD R+Y+AD++ D+I+ SL
Sbjct: 280 MDGTNRSVIVQDKITWPNGLTLDFINDRIYWADAREDYIEFASL---------------- 323
Query: 284 WIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
DG+N ++S + A+ L +Y WTDW
Sbjct: 324 ------------------DGTNRHTVLSQDIPHIFAMTLFEEFIY-----------WTDW 354
Query: 344 GENPRIERI-GMDGSNRSTIIST 365
E I R G+N+S +IST
Sbjct: 355 -ETKSINRAHKTQGTNKSMLIST 376
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 180/428 (42%), Gaps = 106/428 (24%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEG--PGCDLAE-CKHKFGLCSNTCHPTPLGALCTCPPG 58
+ +CV VCDG DCP+GADE GC CK +C N C P
Sbjct: 14 SHKCVPQRWVCDGDRDCPDGADESVKAGCVFNNTCKAGEFMCQNR----------QCIPK 63
Query: 59 EILSNDSVTCQDMN----ECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHS 114
+ + C D + ECE P C NE DN C
Sbjct: 64 HFVCDHDNDCGDGSDESVECEYPA--------------CKANE---FRCDNGRC------ 100
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
LI + D + D ++ SG D L + + Y+L +LN
Sbjct: 101 ---LIQKSWECDGEFDCHDH-SDEAPKNPHCSGTDEEPFLIF----ANRYYL-RKLNL-- 149
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD-WGENPRIERIGMDGSNRSTII 233
+G+N +L + + LD + ++WTD + I R+ ++GSN +
Sbjct: 150 ----DGSNYTLLKQ---GLNNAVALDFDYRQQMIYWTDVTTQGSMIRRMNINGSNVQVLH 202
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
T + P+GL +D + LYW D+G + +
Sbjct: 203 RTSLSNPDGLAVDW------------------------------VGGNLYWCDKGRDTIE 232
Query: 294 LKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
+ + ++G+ ++LV+ L E A+A+D+ NG LY W+DWG+ P I R
Sbjct: 233 V----SKLNGAYRTVLVNSGLREPRAVAVDVRNGYLY-----------WSDWGDIPHIGR 277
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
IGMDG+NRS I+ KI WPNGLTLD R+Y+AD++ D+I+F + DGT R V+ D+
Sbjct: 278 IGMDGTNRSVIVQDKITWPNGLTLDFINDRIYWADAREDYIEFASLDGTNRHTVLSQDIP 337
Query: 412 VEFTNDLM 419
F L
Sbjct: 338 HIFAMTLF 345
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGM 354
+ K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ +
Sbjct: 144 LRKLNLDGSNYTLLKQG-LNNAVALDFD----YRQQM-----IYWTDVTTQGSMIRRMNI 193
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
+GSN + T + P+GL +D +Y+ D D I+ +G R +L++
Sbjct: 194 NGSNVQVLHRTSLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYR--TVLVN----- 246
Query: 415 TNDLMGDNGVPALALDLENGMLYYSTEG 442
G A+A+D+ NG LY+S G
Sbjct: 247 ----SGLREPRAVAVDVRNGYLYWSDWG 270
>gi|324501645|gb|ADY40730.1| Very low-density lipoprotein receptor [Ascaris suum]
gi|324502291|gb|ADY41008.1| Very low-density lipoprotein receptor [Ascaris suum]
Length = 937
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 170/408 (41%), Gaps = 125/408 (30%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTCHPTPL-------------- 49
C++ +K C+G+ DC +G+DE C LA K K + C TPL
Sbjct: 327 CIHKSKWCNGQEDCFDGSDEK-DCHLAPPKKEKCETYEHRCDGTPLQCIPYESLCVPNMA 385
Query: 50 --------------------------------GALCTCPPGEILSNDSVTCQDMNECEQP 77
LC CP G L + C D++EC
Sbjct: 386 NNDCAKTVCNKDLKICDEVAEGHCECRTTVHNATLCYCPRGFRL--EGRVCVDIDECATV 443
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHT---------CKA--------INHSAA---F 117
G C+Q C NT G YIC C GY L + C+A +++ AA F
Sbjct: 444 GTCAQKCINTPGGYICECYPGYRLTMGESSSDGPNTVGKCRARGSDPLLLLSNRAAIRRF 503
Query: 118 LIISNRHSILVADLEEK---------------------------GKDHRAQDI------- 143
+ISN++ L+A LE GK +DI
Sbjct: 504 DLISNKYEPLIAKLESAVAMDFLHKNDTLIWSDVSQEKIMICHMGKGLIVKDIRQCAEGG 563
Query: 144 -----VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
V + +GLA DW+ ++W D+ L++I V D R L D + +PR +
Sbjct: 564 DNITLVDKDVSTPDGLAVDWVHQLLFWTDTGLDQINVVDLVSRRRRTLFSDGLDEPRAIA 623
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADS 257
+DPS G +FWTDWG N RIER GMDG++R+ +IS I WPNGL LDI +RVY+AD+
Sbjct: 624 VDPSRGL--IFWTDWGVNARIERAGMDGNDRAVLISGDSIKWPNGLALDILEQRVYWADA 681
Query: 258 KLDFI-------DCKSLEIKTNVNYSTIF------RKLYWIDEGGNGV 292
K+ I + L I+++ F +LYW D GV
Sbjct: 682 KVKLIMSCDYWGENTRLVIRSHERLRHPFSLTVFEERLYWTDWDHEGV 729
>gi|6681362|dbj|BAA88688.1| MEGF7 [Rattus norvegicus]
Length = 1298
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 157/355 (44%), Gaps = 69/355 (19%)
Query: 20 NGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----E 75
D +C + G CS+ C P P G C CP G L D TC E
Sbjct: 693 QAVDRAQPLGFNKCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFS 752
Query: 76 QPGYCSQMCTNTKGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
G ++ +T + N L+YD+ K + ++ FL + R + ++
Sbjct: 753 SRGSIRRISLDTDDHTDVHVPVPGLNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSN 811
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
+E ++ GL +GLA DW+ ++YW D+ N IE +G+ R VL ++
Sbjct: 812 MET---------VIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNS 862
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ +PR + + P G +LFWTDWG +IER +DGS R +I+ + WPNGLTLD TR
Sbjct: 863 LDEPRAIAVFPRKG--YLFWTDWGHIAKIERANLDGSERKVLINADLGWPNGLTLDYDTR 920
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
R+Y+ D+ LD +I A+++G +LV
Sbjct: 921 RIYWVDAHLD----------------------------------RIESADLNGKLRQVLV 946
Query: 311 SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
S + AL ++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 947 S-HVSHPFALTQQD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 988
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 144/333 (43%), Gaps = 92/333 (27%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---- 126
N C + G C+ +C + +Y C+C G+ + ++H C FL+ + R I
Sbjct: 93 NRCGDNNGGCTHLCLPSGQNYTCACPTGF-RKINSHACA--QSLDKFLLFARRMDIRRIS 149
Query: 127 -----------------------------------LVADLEEKGK-DHRAQDIVV-SGLD 149
+ D + K D Q +VV + L+
Sbjct: 150 FDTEDLSDDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQKVVVDTSLE 209
Query: 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
GLA DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR ++++P G +++
Sbjct: 210 SPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGG--YMY 267
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEI 269
WTDWG +P+IER GMD SNR IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 268 WTDWGASPKIERAGMDASNRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF 322
Query: 270 KTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
A +DGS +L+ QL L L +Y
Sbjct: 323 -----------------------------AGLDGSKRKVLIGSQLPHPFGLTLYGQRIY- 352
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G +R T+
Sbjct: 353 ----------WTDWQTKSIQSADRLTGLDRETL 375
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 129/248 (52%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P+P G CTCP G L D TC PG S + +
Sbjct: 399 CAVENGGCSHLCLRSPSPSGFSCTCPTGINLLLDGKTCS-------PGMNSFLIFARRID 451
Query: 90 SYICSCNEGY---VLEYDNHTCK---AIN----HSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K AI + S H I A L+ G H
Sbjct: 452 VRMVSLDIPYFADVVVPINMTMKNTIAIGVDPLEGKVYWSDSTLHRISRASLD--GSQH- 508
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 509 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 567
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D + ++ +AD+
Sbjct: 568 YHEMG--FMYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHT 625
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 626 ERIEVADL 633
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 137/333 (41%), Gaps = 98/333 (29%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G CS +C + + + C+C G L D TC +S FLI + R + + L+
Sbjct: 404 GGCSHLCLRSPSPSGFSCTCPTGINLLLDGKTCSPGMNS--FLIFARRIDVRMVSLDIP- 460
Query: 136 KDHRAQDIVVSGLDLVEGLA--YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
+ A +V + + +A D + G +YW DS L+
Sbjct: 461 --YFADVVVPINMTMKNTIAIGVDPLEGKVYWSDSTLH---------------------- 496
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
RI R +DGS II+T + +GL +D
Sbjct: 497 ------------------------RISRASLDGSQHEDIITTGLQTTDGLAVD------- 525
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
I RK+YW D G N +I N+DGS +LV
Sbjct: 526 -----------------------AIGRKVYWTDTGTN----RIEVGNLDGSMRKVLVWQN 558
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGL
Sbjct: 559 LDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGL 609
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
T+D + ++ +AD+ + I+ + +G R ++
Sbjct: 610 TVDKTSSQLLWADAHTERIEVADLNGANRHTLV 642
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR--RVY 253
G DPSP T LF I RI +D + + + N ++LD + +VY
Sbjct: 738 GKTCDPSPETYLLF----SSRGSIRRISLDTDDHTDVHVPVPGLNNVISLDYDSVDGKVY 793
Query: 254 FADSKLDFI---DCKSLEIKTNVNYST----------IFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I D ++T + + + R LYW D G N I +
Sbjct: 794 YTDVFLDVIRRADLNGSNMETVIGHGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 849
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 850 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 900
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+ + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 901 VLINADLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 946
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 120/304 (39%), Gaps = 53/304 (17%)
Query: 129 ADLEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
A LE G D + ++++ L GL D + W D+ RIEV D NG NR L
Sbjct: 583 AKLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHTERIEVADLNGANRHTLV 642
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P G+ L S +++WTDW + I R D S S +I + P + +
Sbjct: 643 SP-VQHPYGLTLLDS----YIYWTDW-QTRSIHR--ADKSTGSNVILVRSNLPGLMDIQA 694
Query: 248 ATRRVYFADSKLDFIDCKS-----------------------LEIKTNVNYSTIFRKLYW 284
R L F C S +++K + + Y
Sbjct: 695 VDRA-----QPLGFNKCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYL 749
Query: 285 IDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTD 342
+ G +I D ++ + V G L ++LD + +G +YY+ +
Sbjct: 750 L-FSSRGSIRRISLDTDDHTDVHVPVPG-LNNVISLDYDSVDGKVYYTDVFLD------- 800
Query: 343 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
I R ++GSN T+I + +GL +D R +Y+ D+ + I+ DG+ R
Sbjct: 801 -----VIRRADLNGSNMETVIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCR 855
Query: 403 QQVI 406
+ +I
Sbjct: 856 KVLI 859
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 100/255 (39%), Gaps = 56/255 (21%)
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
R ++W D ++ IER +DGS+R +IS + P+ + + +Y+ D I+
Sbjct: 3 RRMYWVD-AKHHVIERANLDGSHRKAVISQGL--PHPFAITVFEDSLYWTDWHTKSIN-- 57
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLK--IGKA----NMDGSNASILVSGQLY---- 315
S T N I KL++ + P + GK N G L SGQ Y
Sbjct: 58 SANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGKNRCGDNNGGCTHLCLPSGQNYTCAC 117
Query: 316 ---------EALALDLENGMLYYSTLKCTR-------------------------W---- 337
A A L+ +L+ + R W
Sbjct: 118 PTGFRKINSHACAQSLDKFLLFARRMDIRRISFDTEDLSDDVIPLADVRSAVALDWDSRD 177
Query: 338 --LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
++WTD + I R DG+ + ++ T + P GL +D T ++Y+ D+ D I+
Sbjct: 178 DHVYWTDVSTD-TISRAKWDGTGQKVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVA 236
Query: 396 NYDGTGRQQVILIDL 410
N DG+ R +I +L
Sbjct: 237 NTDGSMRTVLIWENL 251
>gi|67845963|dbj|BAE00009.1| LDL receptor [Seriola quinqueradiata]
Length = 252
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 126/252 (50%), Gaps = 46/252 (18%)
Query: 28 CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNT 87
C EC + G CS+ C +G C CP G L D+ C+D++EC P CSQ+C N
Sbjct: 4 CGSNECLYNNGGCSHICKDLKIGYECLCPAGFSLV-DTKRCEDIDECANPDTCSQICINQ 62
Query: 88 KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK------------- 134
GSY C C EGY ++ +CKA+ + A+L +NRH I L+++
Sbjct: 63 IGSYKCECEEGYQVDPATKSCKAVG-TIAYLFFTNRHEIRKMTLDKREYTRVIPRLKNVV 121
Query: 135 ------------------GKDHRAQ----------DIVV-SGLDLVEGLAYDWIGGHIYW 165
K +RAQ IVV S +D EG+A+DWI G++YW
Sbjct: 122 ALDMNMAAKEIYWSDISQKKIYRAQMDSAEDSTRHSIVVDSDIDAPEGIAFDWIHGNLYW 181
Query: 166 LDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD 225
DS I V +G R L + ++PR +++DP + +++WTDWG +IE+ G++
Sbjct: 182 TDSIRRTISVVTADGRCRKTLFHQDFSKPRAIVVDPH--SNFIYWTDWGNPAKIEKAGLN 239
Query: 226 GSNRSTIISTKI 237
G +R+ +++ I
Sbjct: 240 GGDRTALVTDNI 251
>gi|198417179|ref|XP_002121855.1| PREDICTED: similar to low density lipoprotein-related protein 2,
partial [Ciona intestinalis]
Length = 2009
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 172/416 (41%), Gaps = 105/416 (25%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
+C++ VCD DC + +DE C L EC C+ C TP C C G L
Sbjct: 920 QCIDGGLVCDRNPDCTDRSDE-ERCGLNECATIASNQCAQLCVDTPTSYYCDCNKGYRLL 978
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D C+DMNEC E P CSQ+C NT+GSY C C GY+ E D TC+ + +++ S
Sbjct: 979 PDGKACEDMNECIETPWVCSQLCDNTEGSYYCKCGGGYLREADGKTCRQNSGVDPYIMFS 1038
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLV------------------------------ 151
NR+ I + D R +V G+D V
Sbjct: 1039 NRYYI-----RKISTDGRNYQLVTGGMDRVVALDYHYQDQRLFWTDVMAHEIGSIRFDGS 1093
Query: 152 -------------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT------ 192
EGLA +W+ +YWLD L + V + NGT++ L I
Sbjct: 1094 DRKVLFHREVPDGEGLAVEWVTRKLYWLDGSLQALFVSELNGTSKRTLMSGCIDVNRTYC 1153
Query: 193 --QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
PR +++ P L W+D G P I + ++G + +I+T I +P+ LT+D T
Sbjct: 1154 FHTPRALVVHPK--RSLLLWSDAGVVPYIGKAYLNGGGPTAVITTGISFPSALTVDYVTE 1211
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL- 309
R+Y+ DS +D I ++MDG+N L
Sbjct: 1212 RIYWGDSHID----------------------------------SIQFSDMDGNNRHRLY 1237
Query: 310 VSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
+ GQ + L ++ + +++WTDW + G+DGS+ +++T
Sbjct: 1238 LQGQQFYPKPYALS----FFES-----YIYWTDWSTYSMYKAHGLDGSDFQLLVNT 1284
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 106/238 (44%), Gaps = 40/238 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKF--GLCSNTCHPTPL------GALCTC 55
+CV+ +CD DC + DE GC + H C TC P P LC+C
Sbjct: 1775 KCVSKNVICDSVDDCGDETDES-GCHKGDTTHTCNDSPCEQTCTPIPALDGVPGYYLCSC 1833
Query: 56 PPG-EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH 113
G +I +D +C D+NEC E CSQ+C N KGS CSC++GYVL D+ C A
Sbjct: 1834 DAGFKINDDDRSSCLDVNECVENWATCSQICQNMKGSRQCSCDDGYVLSGDSE-CSAQGF 1892
Query: 114 S----------AAFLIISNRHSILVADLEEKGKDHRA-----------------QDIVVS 146
S A + I++++ + L+ G A D+ V
Sbjct: 1893 SMLLIADEQDVATYDIVNDKEAKLIQRQLRVGALDYAYLGGEQNVLVWTDTASHTDLGVD 1952
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
GL G+A DW+ G+IYW D I V +G R L + + PR ++++P G
Sbjct: 1953 GLKEPNGIAVDWVSGNIYWTDETAGTISVATLDGRYRKTLI-NKLDAPRAIVVNPKAG 2009
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 48/201 (23%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
IV SGL EGL +DWI +Y+ D+ L I +GTN + ++ PRG+++DP
Sbjct: 369 IVTSGLRAPEGLDFDWIHRRLYFTDNGLKIIGSTSPDGTNTSTVVS-GLSLPRGIVVDPC 427
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W+DWG + IER + G+ R+ II + WPNG+ +D ++Y+AD++
Sbjct: 428 RG--YLYWSDWGTH-TIERSSLVGNGRTVIIGDDLLWPNGIAIDYGEDKLYWADAQ---- 480
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
S E ++ ++NMDG++ +L+ G L AL +
Sbjct: 481 --PSKE--------------------------RVERSNMDGTDRELLIQG-LDHPFALAV 511
Query: 323 ENGMLYYSTLKCTRWLFWTDW 343
+ ++++WTDW
Sbjct: 512 LD-----------QFIYWTDW 521
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 35/208 (16%)
Query: 219 IERIGMDGSNRSTIIST-KIYWPNGLTLDIATRRVYFADSK----------LD------- 260
I +D + + I T +P T D+ +R YF+ + LD
Sbjct: 308 ISSFHIDPDDHAQIFRTVTASYPIAATYDLQEQRGYFSTMQGSRSRIGYFQLDQDPNYPR 367
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
+I L +++ I R+LY+ D NG+ + IG + DG+N S +VSG L
Sbjct: 368 YIVTSGLRAPEGLDFDWIHRRLYFTD---NGLKI-IGSTSPDGTNTSTVVSG-------L 416
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L G++ C +L+W+DWG + IER + G+ R+ II + WPNG+ +D
Sbjct: 417 SLPRGIV---VDPCRGYLYWSDWGTH-TIERSSLVGNGRTVIIGDDLLWPNGIAIDYGED 472
Query: 381 RVYFADSK--LDFIDFCNYDGTGRQQVI 406
++Y+AD++ + ++ N DGT R+ +I
Sbjct: 473 KLYWADAQPSKERVERSNMDGTDRELLI 500
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 16/147 (10%)
Query: 154 LAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
+YDW+ IY+L+ + IEV + R+VL K QP + ++P R L+W
Sbjct: 65 FSYDWVTQKIYFLNKFTSETYIEVITSDRRYRLVLLKVVDDQPIAITVNPI--KRLLYWA 122
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE--- 268
D+G+NP+IE +DGSNR+T+ ++ + P + +D VY+ D+K I+ + +
Sbjct: 123 DYGQNPKIESAYLDGSNRTTLATSGVVQPRSIVVDYTNHDVYWCDAKSSTIEKMTWDGSV 182
Query: 269 ---IKTNVNYST-----IFRK-LYWID 286
I++ NY + +F +YW+D
Sbjct: 183 RTTIRSGRNYPSPEGVALFNGFVYWVD 209
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%)
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
R L+W D+G+NP+IE +DGSNR+T+ ++ + P + +D VY+ D+K I+
Sbjct: 117 RLLYWADYGQNPKIESAYLDGSNRTTLATSGVVQPRSIVVDYTNHDVYWCDAKSSTIEKM 176
Query: 396 NYDGTGRQQV 405
+DG+ R +
Sbjct: 177 TWDGSVRTTI 186
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 20/128 (15%)
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
VVSGL L G+ D G++YW D + IE G R V+ D++ P G+ +D
Sbjct: 412 VVSGLSLPRGIVVDPCRGYLYWSDWGTHTIERSSLVGNGRTVIIGDDLLWPNGIAID--Y 469
Query: 204 GTRWLFWTD-WGENPRIERIGMDGSNRSTIIS------------TKIYWPNGLTLDIATR 250
G L+W D R+ER MDG++R +I IYW D +TR
Sbjct: 470 GEDKLYWADAQPSKERVERSNMDGTDRELLIQGLDHPFALAVLDQFIYW-----TDWSTR 524
Query: 251 RVYFADSK 258
VY + +
Sbjct: 525 GVYRVEKQ 532
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 26/161 (16%)
Query: 233 ISTKIYWPNGLT----LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ KIY+ N T +++ T + L +D + + I N I R LYW D G
Sbjct: 70 VTQKIYFLNKFTSETYIEVITSDRRYRLVLLKVVDDQPIAITVN----PIKRLLYWADYG 125
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
N KI A +DGSN + L + + + ++ +D N +Y W D ++
Sbjct: 126 QN---PKIESAYLDGSNRTTLATSGVVQPRSIVVDYTNHDVY-----------WCD-AKS 170
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 387
IE++ DGS R+TI S + Y P+ + + VY+ DS
Sbjct: 171 STIEKMTWDGSVRTTIRSGRNY-PSPEGVALFNGFVYWVDS 210
>gi|326934981|ref|XP_003213560.1| PREDICTED: very low-density lipoprotein receptor-like, partial
[Meleagris gallopavo]
Length = 307
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 132/276 (47%), Gaps = 57/276 (20%)
Query: 71 MNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---- 126
++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ LI +NR I
Sbjct: 1 IDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPC-LIFTNRRDIRKIG 59
Query: 127 ------------------LVADLEEKG---KDHRAQDIVVSGLDLVE------------- 152
L AD+ E+ D + I + +D +
Sbjct: 60 LERKEYIQLVEQLRNTVALDADIAEQKLYWADFSQKAIFSASIDTRDKVGTHTRILDNIY 119
Query: 153 ---GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
G+A DWI +IYW DS I V NG R VL + +P + +DP G +++
Sbjct: 120 SPAGIAVDWIYKNIYWTDSSAKTISVASLNGKKRKVLFLSELREPASIAVDPLSG--FMY 177
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC----- 264
W+DWGE +IE+ GM+G +R +++T+I WPNG+ LD+ R+Y+ DSKL +
Sbjct: 178 WSDWGEPAKIEKAGMNGFDRQQLVTTEIQWPNGIALDLVKSRLYWLDSKLHMLSSVDLNG 237
Query: 265 --KSLEIKTNVNYS-----TIFR-KLYWIDEGGNGV 292
+ L +K+++ TIF +++WID V
Sbjct: 238 QDRRLVLKSHMFLPHPLALTIFEDRVFWIDGENEAV 273
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 102/206 (49%), Gaps = 34/206 (16%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST- 277
I +IG++ ++ ++ L DIA +++Y+AD I S++ + V T
Sbjct: 55 IRKIGLERKEYIQLVE-QLRNTVALDADIAEQKLYWADFSQKAIFSASIDTRDKVGTHTR 113
Query: 278 ---------------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALAL 320
I++ +YW D + + A+++G +L +L E ++A+
Sbjct: 114 ILDNIYSPAGIAVDWIYKNIYWTDSSAKTISV----ASLNGKKRKVLFLSELREPASIAV 169
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
D +G +Y W+DWGE +IE+ GM+G +R +++T+I WPNG+ LD+
Sbjct: 170 DPLSGFMY-----------WSDWGEPAKIEKAGMNGFDRQQLVTTEIQWPNGIALDLVKS 218
Query: 381 RVYFADSKLDFIDFCNYDGTGRQQVI 406
R+Y+ DSKL + + +G R+ V+
Sbjct: 219 RLYWLDSKLHMLSSVDLNGQDRRLVL 244
>gi|432950269|ref|XP_004084455.1| PREDICTED: low-density lipoprotein receptor-related protein 4-like,
partial [Oryzias latipes]
Length = 1261
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 159/338 (47%), Gaps = 59/338 (17%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
+C + G C++ C P P G C CP G +L D +C D + + +++
Sbjct: 681 KCSRRNGGCTHLCLPRPNGTSCACPTGILLKRDGRSCDDSPDMYLL-FSNRVSVRRISLD 739
Query: 92 ICSCNEGYVLEYDNHTCKAINHSAA----FLIISNRHSILVADLEEKGKDHRAQDIVVSG 147
+ +V + H ++++ + + I A+L+ G + ++ G
Sbjct: 740 TDDFTDVHVPVPELHNVISLDYDSVDGKLYYTDVTLDVIRRANLDGSG----METVISQG 795
Query: 148 LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
L +GLA DW+ ++YW D+ N IEV +GT R VL + + +PR + + PS G +
Sbjct: 796 LKTTDGLAVDWVSRNMYWTDTGRNTIEVARLDGTCRKVLVNNTLDEPRAIAVFPSKG--F 853
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
LFWTDWG P+IER +DGS+R +I++ + WPNGLTLD TRR+++ D+ LD
Sbjct: 854 LFWTDWGHIPKIERSHLDGSDRKVLINSDLGWPNGLTLDYDTRRIFWVDAHLD------- 906
Query: 268 EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGML 327
+I ++++G +LVS + AL ++
Sbjct: 907 ---------------------------RIESSDLNGKLRQVLVS-PVSHPFALTQQD--- 935
Query: 328 YYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
RW++WTDW + I+R+ G N+ T+++
Sbjct: 936 --------RWIYWTDW-QTKSIQRVDKHSGRNKETVLA 964
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 145/326 (44%), Gaps = 91/326 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI--LVADLEEKG 135
G CS +C + SY C+C G+ + D+ C N FL+ + R I + D E+
Sbjct: 76 GGCSHLCLPSNKSYTCACPTGF-RKVDHFNCS--NSLDKFLLFARRTDIRRISFDTEDMS 132
Query: 136 KD--------------------------------HRA------QDIVV-SGLDLVEGLAY 156
D +RA Q++VV + L+ GLA
Sbjct: 133 DDVIPLADVRNSVALDWDAKYSYIYWTDVTTDSINRALWNGTKQEVVVDTSLESPAGLAI 192
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR +++DP G +++WTDWG N
Sbjct: 193 DWVTSKLYWTDAGTDRIEVSNADGSMRTVLIWENLDRPRDIVVDPVGG--FMYWTDWGAN 250
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD S+R IIS+ + WPNGL +D T+R+Y+AD+ + K++E
Sbjct: 251 PKIERAGMDASSRIVIISSNLTWPNGLAIDYETKRLYWADAGM-----KTIEF------- 298
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
N DGS+ +L+ QL L + LY
Sbjct: 299 ----------------------GNFDGSDRQVLIGSQLSHPFGLTVHEDKLY-------- 328
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G +R T+
Sbjct: 329 ---WTDWQSKSIQSADKLTGLSRRTL 351
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 118/245 (48%), Gaps = 20/245 (8%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C G CS+ C P P C CP G L D TC PG S + +
Sbjct: 375 CAADNGGCSHLCLLAPAPKAFSCGCPTGVNLQMDGKTCT-------PGMNSFLIFARRTD 427
Query: 91 Y-ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRA-------QD 142
+ S + Y + ++ ++ A + +D K K RA +D
Sbjct: 428 IRMVSLDIPYFADVVLPVNTSMKNTIAVGADPKEGKVYWSDSTLK-KISRANINGTGHED 486
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ GL +GLA D +G IYW D+ NRIEV + +GT R VL N+ PR + L
Sbjct: 487 IISKGLMTTDGLAVDAVGRKIYWTDTGTNRIEVANLDGTMRKVLIWQNLDSPRAIALYHE 546
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWGE ++ER MDGS+R+ +IS + WPNGL +D+A ++ +AD+ + I
Sbjct: 547 MG--YIYWTDWGEQAKLERSAMDGSDRAVLISNNLGWPNGLAVDMAGSQLLWADAHTERI 604
Query: 263 DCKSL 267
+ L
Sbjct: 605 EASDL 609
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 137/337 (40%), Gaps = 94/337 (27%)
Query: 71 MNECEQP-GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
N+C + G C+ +C C+C G +L+ D +C + +L+ SNR S+
Sbjct: 679 FNKCSRRNGGCTHLCLPRPNGTSCACPTGILLKRDGRSCD--DSPDMYLLFSNRVSVRRI 736
Query: 130 DLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
L+ D + V L V L YD + G +Y+ D L+ I
Sbjct: 737 SLDTD--DFTDVHVPVPELHNVISLDYDSVDGKLYYTDVTLDVIR--------------- 779
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
R +DGS T+IS + +GL +D +
Sbjct: 780 -------------------------------RANLDGSGMETVISQGLKTTDGLAVDWVS 808
Query: 250 RRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL 309
R +YW D G N + + A +DG+ +L
Sbjct: 809 R------------------------------NMYWTDTGRNTIEV----ARLDGTCRKVL 834
Query: 310 VSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYW 369
V+ L E A+ + +LFWTDWG P+IER +DGS+R +I++ + W
Sbjct: 835 VNNTLDEPRAI---------AVFPSKGFLFWTDWGHIPKIERSHLDGSDRKVLINSDLGW 885
Query: 370 PNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
PNGLTLD TRR+++ D+ LD I+ + +G RQ ++
Sbjct: 886 PNGLTLDYDTRRIFWVDAHLDRIESSDLNGKLRQVLV 922
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 89/171 (52%), Gaps = 15/171 (8%)
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
K+YW + I+ R + + I K L + + RK+YW D G N +
Sbjct: 463 KVYWSDSTLKKIS--RANINGTGHEDIISKGLMTTDGLAVDAVGRKIYWTDTGTN----R 516
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
I AN+DG+ +L+ L A+ L + M Y ++WTDWGE ++ER MD
Sbjct: 517 IEVANLDGTMRKVLIWQNLDSPRAIALYHEMGY---------IYWTDWGEQAKLERSAMD 567
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
GS+R+ +IS + WPNGL +D+A ++ +AD+ + I+ + +G R+ ++
Sbjct: 568 GSDRAVLISNNLGWPNGLAVDMAGSQLLWADAHTERIEASDLNGLNRRTLV 618
>gi|426345245|ref|XP_004040331.1| PREDICTED: LOW QUALITY PROTEIN: pro-epidermal growth factor
[Gorilla gorilla gorilla]
Length = 1196
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 138/297 (46%), Gaps = 52/297 (17%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C L C CS+ C T G LC CP G +L D TC +
Sbjct: 382 CPVGFVLLPDGKRCHQLVSCPRNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SG 438
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---- 126
C P G CSQ+C + S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 439 CSSPDNGGCSQLCIPLSPVSWECDCFPGYDLQLDEKSCAA-SGPQPFLLFANSQDIRHMH 497
Query: 127 ---------------LVADLEEKGKDHR--------------------AQDIVVSGLDLV 151
+V L+ +++ + ++ G+D+
Sbjct: 498 FDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEGVDVP 557
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EGLA DWIG YW D + I D NG ++AK+NI+QPRG+ + P + LFWT
Sbjct: 558 EGLAVDWIGRRFYWTDRGKSLIGRSDLNGKRSKIIAKENISQPRGIAVHPM--AKRLFWT 615
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
D G NPRIE + G R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 616 DTGINPRIESSSLQGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLD 672
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 171/427 (40%), Gaps = 89/427 (20%)
Query: 34 KHKFGLCSNT-CHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGSY 91
K + G CS+T C LCTC G LS D C+D+NEC + C+ C NT GSY
Sbjct: 319 KLRKGNCSSTVCGQDLQSHLCTCAEGYALSRDRKYCEDVNECAFWNHGCTLGCKNTPGSY 378
Query: 92 ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD-----------LEEKGK---- 136
C+C G+VL D C + + + +L ++ LE GK
Sbjct: 379 YCTCPVGFVLLPDGKRCHQLVSCPRNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTCSG 438
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN-- 190
D+ + L V D G+ LD + C +G +L ++
Sbjct: 439 CSSPDNGGCSQLCIPLSPVS-WECDCFPGYDLQLDEK-----SCAASGPQPFLLFANSQD 492
Query: 191 --------------ITQPRGMM--LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
++Q GM+ LD P +++ IER MDGS R +I
Sbjct: 493 IRHMHFDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALK-WIERANMDGSQRERLIE 551
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
+ P GL +D I R+ YW D G +
Sbjct: 552 EGVDVPEGLAVDW------------------------------IGRRFYWTDRGKS---- 577
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
IG+++++G + I+ + + + + + LFWTD G NPRIE +
Sbjct: 578 LIGRSDLNGKRSKIIAKENISQPRGIAVH---------PMAKRLFWTDTGINPRIESSSL 628
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
G R I S+ + WP+G+T+D T ++Y+ D+K I+ N DG+ R+++ D+ F
Sbjct: 629 QGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLDGSKRRRLTQNDVGHPF 688
Query: 415 TNDLMGD 421
+ D
Sbjct: 689 AVAVFED 695
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 112/258 (43%), Gaps = 37/258 (14%)
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEG 153
SC EG + N TC A FLI S+ +SI D E G ++ Q +V +G+ ++
Sbjct: 27 SCPEGTLAGNGNSTCVG---PAPFLIFSHGNSIFRIDTE--GTNYE-QLVVDAGVSVIMD 80
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRWL--- 208
Y+ IYW+D ++ NG+ R+ + N++ GM ++ W+
Sbjct: 81 FHYN--EKRIYWVDLERQLLQRVFLNGSRQERVCNIEKNVS---GMAIN------WINEE 129
Query: 209 -FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKL 259
W++ E I M G+N ++S + +P + +D R ++++ + L
Sbjct: 130 VIWSNQQEG-IITVTDMKGNNSHVLLSA-LKYPANIAVDPVERFIFWSSEVAGSLYRADL 187
Query: 260 DFIDCKSL----EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D + K+L E T V+ + ++L+WI G I + DG + I +
Sbjct: 188 DGVGVKALLETSEKITAVSLDVLDKRLFWIQYNREGSNSLICSCDYDGGSVHISKHPTQH 247
Query: 316 EALALDLENGMLYYSTLK 333
A+ L ++YST K
Sbjct: 248 NLFAMSLFGDRIFYSTWK 265
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 4 RCVNLTKVCDGKTDCPNG-ADEGPGC-DLAECKHKFGLC---SNTCHPTPLGALCTCPPG 58
RC++ + D C G A +G C D+ EC+ +C S+ C T G +C C G
Sbjct: 845 RCISEGE--DATCQCLKGFAGDGKLCSDIDECEMGVPVCPPASSKCINTEGGYVCRCSEG 902
Query: 59 EILSNDSVTCQDMNECEQPGY-CSQ--MCTNTKGSYICSC 95
D + C D++EC+Q + C + CTNT+G Y C C
Sbjct: 903 --YRGDGIHCLDIDECQQGVHSCGENASCTNTEGGYTCMC 940
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 10/55 (18%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNECEQ------PGYCSQMCTNTKGSYICSCNEGY 99
A C C G + D C D++ECE P S C NT+G Y+C C+EGY
Sbjct: 853 ATCQCLKG--FAGDGKLCSDIDECEMGVPVCPPA--SSKCINTEGGYVCRCSEGY 903
>gi|50978782|ref|NP_001003094.1| pro-epidermal growth factor precursor [Canis lupus familiaris]
gi|62901516|sp|Q9BEA0.1|EGF_CANFA RecName: Full=Pro-epidermal growth factor; Short=EGF; Contains:
RecName: Full=Epidermal growth factor; Flags: Precursor
gi|13537341|dbj|BAB40599.1| epidermal growth factor [Canis lupus familiaris]
Length = 1216
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 134/282 (47%), Gaps = 48/282 (17%)
Query: 29 DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQP--GYCSQMCTN 86
L C CS+ C T G +C CP G +L D TC C P G CSQ+C
Sbjct: 399 QLIACPSNTSKCSHDCVLTSDGPICFCPEGSVLEADGKTCSG---CSSPDNGGCSQLCLP 455
Query: 87 -TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI------------------- 126
+ S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 456 LSPVSWECGCFPGYDLQLDKQSCAA-SGPQPFLLFANSQDIRHMHFDGTDYGTLLSQQMG 514
Query: 127 LVADLEEKGKDHR--------------------AQDIVVSGLDLVEGLAYDWIGGHIYWL 166
+V L+ +++ + ++ G+D+ EGLA DWI YW
Sbjct: 515 MVFALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEGVDVPEGLAIDWIDRKFYWT 574
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226
DS + IE D NG +R ++ K++I+QPRG+ + P + LFWTD G NPRIE + G
Sbjct: 575 DSGKSLIEGSDLNGKHREIIIKEDISQPRGIAVHPM--AKRLFWTDMGINPRIESSSLQG 632
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
R I S+ + WP+G+T+D T ++Y+ D+KL I+ +L+
Sbjct: 633 IGRLVIASSDLVWPSGITIDYVTDKLYWCDTKLSVIEMANLD 674
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 175/428 (40%), Gaps = 79/428 (18%)
Query: 29 DLAECKHKFGLC-SNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTN 86
D CK K G C +TC CTC G LS D C+D+NEC + C+ C N
Sbjct: 316 DQKLCKWKQGNCRGSTCGQDSKSYSCTCAEGYTLSQDGKYCEDVNECAFWNHGCTLGCEN 375
Query: 87 TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD-----------LEEKG 135
GSY C+C G++L D C + + + +L +D LE G
Sbjct: 376 IPGSYYCTCPVGFILLPDGKRCHQLIACPSNTSKCSHDCVLTSDGPICFCPEGSVLEADG 435
Query: 136 KDHRAQDIVVSG--LDLVEGLA-YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN-- 190
K +G L L+ W G D +L++ + C +G +L ++
Sbjct: 436 KTCSGCSSPDNGGCSQLCLPLSPVSWECGCFPGYDLQLDK-QSCAASGPQPFLLFANSQD 494
Query: 191 --------------ITQPRGMM--LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
++Q GM+ LD P +++ IER MDGS R +I
Sbjct: 495 IRHMHFDGTDYGTLLSQQMGMVFALDHDPVENKIYFAHTALK-WIERANMDGSQRERLIE 553
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
+ P GL +D+ID RK YW D G +
Sbjct: 554 EGVDVPEGLA--------------IDWID----------------RKFYWTDSGKS---- 579
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
I ++++G + I++ + + + + + LFWTD G NPRIE +
Sbjct: 580 LIEGSDLNGKHREIIIKEDISQPRGIAVH---------PMAKRLFWTDMGINPRIESSSL 630
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
G R I S+ + WP+G+T+D T ++Y+ D+KL I+ N DG+ RQ++ D+ F
Sbjct: 631 QGIGRLVIASSDLVWPSGITIDYVTDKLYWCDTKLSVIEMANLDGSKRQRLAQNDVGHPF 690
Query: 415 TNDLMGDN 422
+ D+
Sbjct: 691 AMAVFEDH 698
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 113/264 (42%), Gaps = 39/264 (14%)
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
A FLI S+ SI DLE G +H Q + +G+ ++ Y+ IYW+D ++
Sbjct: 45 APFLIFSHGISIFRIDLE--GTNHE-QLVADAGVSVIMDFHYN--KERIYWVDPERQLLQ 99
Query: 175 VCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRW----LFWTDWGENPRIERIGMDGSN 228
NGT R+ + N++ GM ++ W L W++ E I M G+N
Sbjct: 100 RVFLNGTRQERVCNIEKNVS---GMAIN------WINEELIWSNQQEG-IITVTDMKGNN 149
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADS-----KLDFIDCKSLEIK---------TNVN 274
S ++ + +P + +D R ++++ L D +E K T V+
Sbjct: 150 -SRVLLRALNYPANVAIDPIERFIFWSSEVAVAGSLHRADLNGVEEKILLQTSERITAVS 208
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYST-LK 333
+ ++L+WI +G I N DG + + + A+ L ++YST K
Sbjct: 209 LDVLDKQLFWIQYSRDGSNSHIYSCNYDGGSVHLSKHLTQHNFFAMSLFGNQIFYSTWKK 268
Query: 334 CTRWLFWTDWGENPRIERIGMDGS 357
T W+ G++ + RI +D S
Sbjct: 269 KTIWIANKHSGKD--MVRINLDSS 290
>gi|71995462|ref|NP_495387.2| Protein T13C2.6, isoform a [Caenorhabditis elegans]
gi|351062359|emb|CCD70327.1| Protein T13C2.6, isoform a [Caenorhabditis elegans]
Length = 909
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 157/333 (47%), Gaps = 89/333 (26%)
Query: 4 RCVNLTKVC-DGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ ++K+C + DC +G +++ C K + C P+ G C C P +
Sbjct: 364 QCIEMSKLCASAQFDCGDG-------NMSVCSQKKII--EMCKPSSEG--CVCRPSFVRG 412
Query: 63 NDSVTCQD-----------MNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN------ 105
N+ C+D +NECE G C Q+C N GSY C+C+ GY + + +
Sbjct: 413 NNVCHCKDGYKLENGQCIDINECEIAGVCDQICLNIPGSYRCACHAGYQISFGDTKIGSG 472
Query: 106 ---HTCKAINHSAAFLIISNRHSILVADLEEK---------------------------- 134
+ C+A+ ++++NRH+I DL K
Sbjct: 473 RIANKCRAMG-GDPLVLLTNRHTIRQFDLVNKMHFPVSSSPGSAVAMDFHILNGTLIWSD 531
Query: 135 -------------------GKD--HRAQDIVVSG--LDLVEGLAYDWIGGHIYWLDSRLN 171
G D + +IV++G + +GLA DW+ ++W D L+
Sbjct: 532 VLSKQILKCSIGNVSNAFLGTDMCDKKHEIVLTGDKIHTPDGLAVDWVHDLLFWTDGGLD 591
Query: 172 RIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS 230
+I V D +NG R++ + D + +PR + +DP G +FWTDWG+ RIER GMDG +R+
Sbjct: 592 QINVLDMKNGKQRVLYSSD-LEEPRAIAVDPEVGL--IFWTDWGKKARIERSGMDGQHRT 648
Query: 231 TIIS-TKIYWPNGLTLDIATRRVYFADSKLDFI 262
I+ ++ WPNGL LD +RVY+AD+K+ I
Sbjct: 649 VIVEGDRVVWPNGLALDYVDKRVYWADAKIKSI 681
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 129 ADLEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTN--RI 184
A +E G D + + ++V G +V GLA D++ +YW D+++ I CD G N +
Sbjct: 635 ARIERSGMDGQHRTVIVEGDRVVWPNGLALDYVDKRVYWADAKIKSIFSCDYWGKNIKTV 694
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
+ + + P M + LF+TDW + I G++ T++
Sbjct: 695 LHSHQYLRHPFSMAVFEDR----LFYTDWEHDGVITVNKFTGADIRTVM 739
>gi|71995467|ref|NP_872023.2| Protein T13C2.6, isoform b [Caenorhabditis elegans]
gi|351062360|emb|CCD70328.1| Protein T13C2.6, isoform b [Caenorhabditis elegans]
Length = 911
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 157/333 (47%), Gaps = 89/333 (26%)
Query: 4 RCVNLTKVC-DGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ ++K+C + DC +G +++ C K + C P+ G C C P +
Sbjct: 366 QCIEMSKLCASAQFDCGDG-------NMSVCSQKKII--EMCKPSSEG--CVCRPSFVRG 414
Query: 63 NDSVTCQD-----------MNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN------ 105
N+ C+D +NECE G C Q+C N GSY C+C+ GY + + +
Sbjct: 415 NNVCHCKDGYKLENGQCIDINECEIAGVCDQICLNIPGSYRCACHAGYQISFGDTKIGSG 474
Query: 106 ---HTCKAINHSAAFLIISNRHSILVADLEEK---------------------------- 134
+ C+A+ ++++NRH+I DL K
Sbjct: 475 RIANKCRAMG-GDPLVLLTNRHTIRQFDLVNKMHFPVSSSPGSAVAMDFHILNGTLIWSD 533
Query: 135 -------------------GKD--HRAQDIVVSG--LDLVEGLAYDWIGGHIYWLDSRLN 171
G D + +IV++G + +GLA DW+ ++W D L+
Sbjct: 534 VLSKQILKCSIGNVSNAFLGTDMCDKKHEIVLTGDKIHTPDGLAVDWVHDLLFWTDGGLD 593
Query: 172 RIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS 230
+I V D +NG R++ + D + +PR + +DP G +FWTDWG+ RIER GMDG +R+
Sbjct: 594 QINVLDMKNGKQRVLYSSD-LEEPRAIAVDPEVGL--IFWTDWGKKARIERSGMDGQHRT 650
Query: 231 TIIS-TKIYWPNGLTLDIATRRVYFADSKLDFI 262
I+ ++ WPNGL LD +RVY+AD+K+ I
Sbjct: 651 VIVEGDRVVWPNGLALDYVDKRVYWADAKIKSI 683
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 129 ADLEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTN--RI 184
A +E G D + + ++V G +V GLA D++ +YW D+++ I CD G N +
Sbjct: 637 ARIERSGMDGQHRTVIVEGDRVVWPNGLALDYVDKRVYWADAKIKSIFSCDYWGKNIKTV 696
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
+ + + P M + LF+TDW + I G++ T++
Sbjct: 697 LHSHQYLRHPFSMAVFEDR----LFYTDWEHDGVITVNKFTGADIRTVM 741
>gi|441658316|ref|XP_003269400.2| PREDICTED: pro-epidermal growth factor isoform 2 [Nomascus
leucogenys]
Length = 1167
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 138/297 (46%), Gaps = 52/297 (17%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C L C CS+ C T G LC CP G +L D TC +
Sbjct: 382 CPVGFVLLPDGKRCHQLVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SG 438
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---- 126
C P G CSQ+C + S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 439 CSSPDNGGCSQLCIPLSPVSWECDCFPGYDLQLDKKSCAA-SGPQPFLLFANSQDIRHMH 497
Query: 127 ---------------LVADLEEKGKDHR--------------------AQDIVVSGLDLV 151
+V L+ +++ + ++ G+D+
Sbjct: 498 FDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEGVDVP 557
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EGLA DWIG +YW D + I D NG ++ K+NI+QPRG+ + P + LFWT
Sbjct: 558 EGLAVDWIGRRVYWTDRGKSLIGRSDLNGKRSKIITKENISQPRGIAVHPM--AKRLFWT 615
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
D G NPRIE + G R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 616 DTGINPRIESSSLQGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLD 672
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 173/427 (40%), Gaps = 89/427 (20%)
Query: 34 KHKFGLCSNT-CHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGSY 91
K + G CS+T C P LCTC G LS D C+D+NEC + C+ C NT GSY
Sbjct: 319 KLRKGNCSSTVCGQDPQSHLCTCAEGYALSRDRKYCEDVNECAFWNHGCTLGCKNTPGSY 378
Query: 92 ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD-----------LEEKGK---- 136
C+C G+VL D C + + + + +L ++ LE GK
Sbjct: 379 YCTCPVGFVLLPDGKRCHQLVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTCSG 438
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN-- 190
D+ + L V D G+ LD + C +G +L ++
Sbjct: 439 CSSPDNGGCSQLCIPLSPVS-WECDCFPGYDLQLDKK-----SCAASGPQPFLLFANSQD 492
Query: 191 --------------ITQPRGMM--LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
++Q GM+ LD P +++ IER MDGS R +I
Sbjct: 493 IRHMHFDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALK-WIERANMDGSQRERLIE 551
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
+ P GL +D RRV YW D G +
Sbjct: 552 EGVDVPEGLAVDWIGRRV------------------------------YWTDRGKS---- 577
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
IG+++++G + I+ + + + + + LFWTD G NPRIE +
Sbjct: 578 LIGRSDLNGKRSKIITKENISQPRGIAVH---------PMAKRLFWTDTGINPRIESSSL 628
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
G R I S+ + WP+G+T+D T ++Y+ D+K I+ N DG+ RQ++ D+ F
Sbjct: 629 QGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLDGSKRQRLTQNDVGHPF 688
Query: 415 TNDLMGD 421
+ D
Sbjct: 689 AVAVFED 695
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 111/257 (43%), Gaps = 37/257 (14%)
Query: 95 CNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGL 154
C EG + N TC A FLI S+ +SI D E G ++ Q +V +G+ ++
Sbjct: 28 CPEGTLAGNGNSTCVG---PAPFLIFSHGNSIFRIDTE--GTNYE-QLVVDAGVSVIMDF 81
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRWL---- 208
Y+ IYW+D ++ NG+ R+ + N++ GM ++ W+
Sbjct: 82 HYN--EKIIYWVDLERQLLQRVFLNGSRQERVCNIEKNVS---GMAIN------WINEEV 130
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKLD 260
W++ E I M G+N S ++ + +P + +D R ++++ + LD
Sbjct: 131 IWSNQQEG-IITVTDMKGNN-SHVLLRALKYPANIAVDPVERFIFWSSEVAGSLYRADLD 188
Query: 261 FIDCKSL----EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE 316
++ K+L E T V+ + ++L+WI G I + DG + I +
Sbjct: 189 GVEVKALLETSEKITAVSLDVLDKRLFWIQYNREGSNSLICSCDYDGGSVHISKHPTQHN 248
Query: 317 ALALDLENGMLYYSTLK 333
A+ + ++Y T K
Sbjct: 249 VFAMSVFGDRIFYLTWK 265
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 10/55 (18%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNECEQ------PGYCSQMCTNTKGSYICSCNEGY 99
A C C G + D C D++ECE P S C NT+G Y+C C+EGY
Sbjct: 853 ATCQCLKG--FAGDGKLCSDIDECEMGVPVCPPA--SSKCINTEGGYVCQCSEGY 903
>gi|403949907|gb|AFR51946.1| epidermal growth factor [Rattus norvegicus]
Length = 1061
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 137/299 (45%), Gaps = 55/299 (18%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C +L C CS+ C T G LC CP G +L D TC
Sbjct: 383 CPTGFVLLPDGKRCHELVACPGNRSECSHDCILTSDGPLCICPAGSVLGKDGKTC---TG 439
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
C P G CSQ+C + S+ C C GY L+ D +C A FL+ +N I
Sbjct: 440 CSSPDNGGCSQICLPLSLASWECDCFPGYDLQLDRKSCAASMGPQPFLLFANSQDI--RH 497
Query: 131 LEEKGKDHRA-----------------------------------------QDIVVSGLD 149
+ G D++ + ++ G+D
Sbjct: 498 MHFDGTDYKTLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANLDGSQRERLITEGVD 557
Query: 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
EGLA DWIG IYW DS + IE D +G + ++ K++I++PRG+ + P R LF
Sbjct: 558 TPEGLAVDWIGRRIYWTDSGKSVIEGSDLSGKHHQIIIKESISRPRGIAVHPK--ARRLF 615
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
WTD G +PRIE + GS+R+ I S+ + P+G+ +D T +Y+ D+KL I+ L+
Sbjct: 616 WTDTGMSPRIESSSLQGSDRTLIASSNLLEPSGIAIDYLTDTLYWCDTKLSVIEMADLD 674
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 26/217 (11%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST- 277
I + DG++ T++S ++ L D ++YFA + L +I+ +L+ T
Sbjct: 495 IRHMHFDGTDYKTLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANLDGSQRERLITE 554
Query: 278 ------------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
I R++YW D G + I +++ G + I++ + + +
Sbjct: 555 GVDTPEGLAVDWIGRRIYWTDSGKS----VIEGSDLSGKHHQIIIKESISRPRGIAVHPK 610
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
R LFWTD G +PRIE + GS+R+ I S+ + P+G+ +D T +Y+
Sbjct: 611 ---------ARRLFWTDTGMSPRIESSSLQGSDRTLIASSNLLEPSGIAIDYLTDTLYWC 661
Query: 386 DSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
D+KL I+ + DG+ R+++ D+ F+ + D+
Sbjct: 662 DTKLSVIEMADLDGSKRRRLTQNDVGHPFSLAVFEDH 698
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 171/445 (38%), Gaps = 70/445 (15%)
Query: 19 PNGADEGPGCDLAECKHKFGLC-SNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECE-Q 76
P + D CK + G C + P C C G LS D C+D+NEC Q
Sbjct: 305 PGTENRAQASDSERCKQRRGQCLYSLSERDPNSDSCACAEGYTLSRDRKYCEDVNECALQ 364
Query: 77 PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI----------NH-----SAAFLIIS 121
C+ C N GSY C+C G+VL D C + +H S L I
Sbjct: 365 NHGCTLGCENIPGSYYCTCPTGFVLLPDGKRCHELVACPGNRSECSHDCILTSDGPLCIC 424
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
S+L D + + S + L LA W D +L+R G
Sbjct: 425 PAGSVLGKDGKTCTGCSSPDNGGCSQICLPLSLA-SWECDCFPGYDLQLDRKSCAASMGP 483
Query: 182 NRIVLAKDN----------------ITQPRGMM--LDPSPGTRWLFWTDWGENPRIERIG 223
+L ++ +++ GM+ LD P +++ IER
Sbjct: 484 QPFLLFANSQDIRHMHFDGTDYKTLLSRQMGMVFALDYDPVESKIYFAQTALK-WIERAN 542
Query: 224 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN----------- 272
+DGS R +I+ + P GL +D RR+Y+ DS I+ L K +
Sbjct: 543 LDGSQRERLITEGVDTPEGLAVDWIGRRIYWTDSGKSVIEGSDLSGKHHQIIIKESISRP 602
Query: 273 --VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLY 328
+ R+L+W D G+ +I +++ GS+ +++ S L E +A+D LY
Sbjct: 603 RGIAVHPKARRLFWTD---TGMSPRIESSSLQGSDRTLIASSNLLEPSGIAIDYLTDTLY 659
Query: 329 YSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 388
+ K + IE +DGS R + + P +L + V+F+D
Sbjct: 660 WCDTKLS------------VIEMADLDGSKRRRLTQNDVGHP--FSLAVFEDHVWFSDWA 705
Query: 389 LDFIDFCNYDGTGRQQVILIDLMVE 413
+ + N TG+ +V L M++
Sbjct: 706 IPSVIRVNKR-TGQNRVRLRGSMLK 729
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 84/207 (40%), Gaps = 40/207 (19%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
V GLA +WI G I D I V D NG N VL ++ +P +++DP+ R +FW
Sbjct: 119 VSGLAINWIDGEILRTDRWKGVITVTDMNGNNSRVLLS-SLKRPANILVDPT--ERLIFW 175
Query: 211 TD--WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
+ G R + GMD + T + P +++ I LD +D
Sbjct: 176 SSVVTGNLHRADLGGMD-------VKTLLEAPERISVLI-----------LDILD----- 212
Query: 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLY 328
++L+W +G G I + DG + + ++ L + + +
Sbjct: 213 -----------KRLFWAQDGREGSHGYIHSCDYDGGSIHHIRHQARHDLLTMAIFGDKIL 261
Query: 329 YSTLKCTRWLFWTDWGENPRIERIGMD 355
YS LK + ++ D + R+ +D
Sbjct: 262 YSALK-EKAIWIADKHTGKNVVRVNLD 287
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 38 GLCSNTCHPTPLG--ALCTCPPGEILSNDSVTCQDMNECEQPGY----CSQMCTNTKGSY 91
G C + H G A+C C G + D C D++ECE S C NT+G Y
Sbjct: 842 GGCGSHAHCISEGEAAVCQCLKG--FAGDGNLCSDIDECELGSSDCPPTSSRCINTEGGY 899
Query: 92 ICSCNEGY 99
+C C+EGY
Sbjct: 900 VCQCSEGY 907
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 29 DLAECKHKFGLC---SNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQ-- 82
D+ EC+ C S+ C T G +C C G D + C D++EC+Q + CS+
Sbjct: 874 DIDECELGSSDCPPTSSRCINTEGGYVCQCSEG--YEGDGIYCLDVDECQQGSHGCSENA 931
Query: 83 MCTNTKGSYICSC 95
CTNT+G Y C+C
Sbjct: 932 TCTNTEGGYNCTC 944
>gi|441658313|ref|XP_003269401.2| PREDICTED: pro-epidermal growth factor isoform 3 [Nomascus
leucogenys]
Length = 1166
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 138/297 (46%), Gaps = 52/297 (17%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C L C CS+ C T G LC CP G +L D TC +
Sbjct: 340 CPVGFVLLPDGKRCHQLVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SG 396
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---- 126
C P G CSQ+C + S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 397 CSSPDNGGCSQLCIPLSPVSWECDCFPGYDLQLDKKSCAA-SGPQPFLLFANSQDIRHMH 455
Query: 127 ---------------LVADLEEKGKDHR--------------------AQDIVVSGLDLV 151
+V L+ +++ + ++ G+D+
Sbjct: 456 FDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEGVDVP 515
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EGLA DWIG +YW D + I D NG ++ K+NI+QPRG+ + P + LFWT
Sbjct: 516 EGLAVDWIGRRVYWTDRGKSLIGRSDLNGKRSKIITKENISQPRGIAVHPM--AKRLFWT 573
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
D G NPRIE + G R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 574 DTGINPRIESSSLQGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLD 630
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 111/257 (43%), Gaps = 37/257 (14%)
Query: 95 CNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGL 154
C EG + N TC A FLI S+ +SI D E G ++ Q +V +G+ ++
Sbjct: 28 CPEGTLAGNGNSTCVG---PAPFLIFSHGNSIFRIDTE--GTNYE-QLVVDAGVSVIMDF 81
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRWL---- 208
Y+ IYW+D ++ NG+ R+ + N++ GM ++ W+
Sbjct: 82 HYN--EKIIYWVDLERQLLQRVFLNGSRQERVCNIEKNVS---GMAIN------WINEEV 130
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKLD 260
W++ E I M G+N S ++ + +P + +D R ++++ + LD
Sbjct: 131 IWSNQQEG-IITVTDMKGNN-SHVLLRALKYPANIAVDPVERFIFWSSEVAGSLYRADLD 188
Query: 261 FIDCKSL----EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE 316
++ K+L E T V+ + ++L+WI G I + DG + I +
Sbjct: 189 GVEVKALLETSEKITAVSLDVLDKRLFWIQYNREGSNSLICSCDYDGGSVHISKHPTQHN 248
Query: 317 ALALDLENGMLYYSTLK 333
A+ + ++Y T K
Sbjct: 249 VFAMSVFGDRIFYLTWK 265
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 10/55 (18%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNECEQ------PGYCSQMCTNTKGSYICSCNEGY 99
A C C G + D C D++ECE P S C NT+G Y+C C+EGY
Sbjct: 811 ATCQCLKG--FAGDGKLCSDIDECEMGVPVCPPA--SSKCINTEGGYVCQCSEGY 861
>gi|441658310|ref|XP_003269399.2| PREDICTED: pro-epidermal growth factor isoform 1 [Nomascus
leucogenys]
Length = 1208
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 138/297 (46%), Gaps = 52/297 (17%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C L C CS+ C T G LC CP G +L D TC +
Sbjct: 382 CPVGFVLLPDGKRCHQLVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SG 438
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---- 126
C P G CSQ+C + S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 439 CSSPDNGGCSQLCIPLSPVSWECDCFPGYDLQLDKKSCAA-SGPQPFLLFANSQDIRHMH 497
Query: 127 ---------------LVADLEEKGKDHR--------------------AQDIVVSGLDLV 151
+V L+ +++ + ++ G+D+
Sbjct: 498 FDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEGVDVP 557
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EGLA DWIG +YW D + I D NG ++ K+NI+QPRG+ + P + LFWT
Sbjct: 558 EGLAVDWIGRRVYWTDRGKSLIGRSDLNGKRSKIITKENISQPRGIAVHPM--AKRLFWT 615
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
D G NPRIE + G R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 616 DTGINPRIESSSLQGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLD 672
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 173/427 (40%), Gaps = 89/427 (20%)
Query: 34 KHKFGLCSNT-CHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGSY 91
K + G CS+T C P LCTC G LS D C+D+NEC + C+ C NT GSY
Sbjct: 319 KLRKGNCSSTVCGQDPQSHLCTCAEGYALSRDRKYCEDVNECAFWNHGCTLGCKNTPGSY 378
Query: 92 ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD-----------LEEKGK---- 136
C+C G+VL D C + + + + +L ++ LE GK
Sbjct: 379 YCTCPVGFVLLPDGKRCHQLVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTCSG 438
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN-- 190
D+ + L V D G+ LD + C +G +L ++
Sbjct: 439 CSSPDNGGCSQLCIPLSPVS-WECDCFPGYDLQLDKK-----SCAASGPQPFLLFANSQD 492
Query: 191 --------------ITQPRGMM--LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
++Q GM+ LD P +++ IER MDGS R +I
Sbjct: 493 IRHMHFDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALK-WIERANMDGSQRERLIE 551
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
+ P GL +D RRV YW D G +
Sbjct: 552 EGVDVPEGLAVDWIGRRV------------------------------YWTDRGKS---- 577
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
IG+++++G + I+ + + + + + LFWTD G NPRIE +
Sbjct: 578 LIGRSDLNGKRSKIITKENISQPRGIAVH---------PMAKRLFWTDTGINPRIESSSL 628
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
G R I S+ + WP+G+T+D T ++Y+ D+K I+ N DG+ RQ++ D+ F
Sbjct: 629 QGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLDGSKRQRLTQNDVGHPF 688
Query: 415 TNDLMGD 421
+ D
Sbjct: 689 AVAVFED 695
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 111/257 (43%), Gaps = 37/257 (14%)
Query: 95 CNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGL 154
C EG + N TC A FLI S+ +SI D E G ++ Q +V +G+ ++
Sbjct: 28 CPEGTLAGNGNSTCVG---PAPFLIFSHGNSIFRIDTE--GTNYE-QLVVDAGVSVIMDF 81
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRWL---- 208
Y+ IYW+D ++ NG+ R+ + N++ GM ++ W+
Sbjct: 82 HYN--EKIIYWVDLERQLLQRVFLNGSRQERVCNIEKNVS---GMAIN------WINEEV 130
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKLD 260
W++ E I M G+N S ++ + +P + +D R ++++ + LD
Sbjct: 131 IWSNQQEG-IITVTDMKGNN-SHVLLRALKYPANIAVDPVERFIFWSSEVAGSLYRADLD 188
Query: 261 FIDCKSL----EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE 316
++ K+L E T V+ + ++L+WI G I + DG + I +
Sbjct: 189 GVEVKALLETSEKITAVSLDVLDKRLFWIQYNREGSNSLICSCDYDGGSVHISKHPTQHN 248
Query: 317 ALALDLENGMLYYSTLK 333
A+ + ++Y T K
Sbjct: 249 VFAMSVFGDRIFYLTWK 265
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 10/55 (18%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNECEQ------PGYCSQMCTNTKGSYICSCNEGY 99
A C C G + D C D++ECE P S C NT+G Y+C C+EGY
Sbjct: 853 ATCQCLKG--FAGDGKLCSDIDECEMGVPVCPPA--SSKCINTEGGYVCQCSEGY 903
>gi|397519860|ref|XP_003830071.1| PREDICTED: pro-epidermal growth factor isoform 3 [Pan paniscus]
Length = 1166
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 138/297 (46%), Gaps = 52/297 (17%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C L C CS+ C T G LC CP G +L D TC +
Sbjct: 382 CPVGFVLLPDGKRCHQLVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SG 438
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---- 126
C P G CSQ+C + S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 439 CSSPDNGGCSQLCIPLSPVSWECDCFPGYDLQLDKKSCAA-SGPQPFLLFANSQDIRHMH 497
Query: 127 ---------------LVADLEEKGKDHR--------------------AQDIVVSGLDLV 151
+V L+ +++ + ++ G+D+
Sbjct: 498 FDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEGVDVP 557
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EGLA DWIG YW D + I D NG ++AK+N++QPRG+ + P + LFWT
Sbjct: 558 EGLAVDWIGRRFYWTDRGKSLIGRSDLNGKRSKIIAKENLSQPRGIAIHPM--AKRLFWT 615
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
D G NPRIE + G R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 616 DTGINPRIESSSLQGLGRLIIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLD 672
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 172/427 (40%), Gaps = 89/427 (20%)
Query: 34 KHKFGLCSNT-CHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGSY 91
K + G CS+T C LCTC G LS D C+D+NEC + C+ C NT GSY
Sbjct: 319 KLRKGNCSSTVCGQDLQSHLCTCAEGYALSRDRKYCEDVNECAFWNHGCTLGCKNTPGSY 378
Query: 92 ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD-----------LEEKGK---- 136
C+C G+VL D C + + + + +L ++ LE GK
Sbjct: 379 YCTCPVGFVLLPDGKRCHQLVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTCSG 438
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN-- 190
D+ + L V D G+ LD + C +G +L ++
Sbjct: 439 CSSPDNGGCSQLCIPLSPVS-WECDCFPGYDLQLDKK-----SCAASGPQPFLLFANSQD 492
Query: 191 --------------ITQPRGMM--LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
++Q GM+ LD P +++ IER MDGS R +I
Sbjct: 493 IRHMHFDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALK-WIERANMDGSQRERLIE 551
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
+ P GL +D I R+ YW D G +
Sbjct: 552 EGVDVPEGLAVDW------------------------------IGRRFYWTDRGKS---- 577
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
IG+++++G + I+ L + + + + LFWTD G NPRIE +
Sbjct: 578 LIGRSDLNGKRSKIIAKENLSQPRGIAIH---------PMAKRLFWTDTGINPRIESSSL 628
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
G R I S+ + WP+G+T+D T ++Y+ D+K I+ N DG+ R+++ D+ F
Sbjct: 629 QGLGRLIIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLDGSKRRRLTQNDVGHPF 688
Query: 415 TNDLMGD 421
+ D
Sbjct: 689 AVAVFED 695
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 37/258 (14%)
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEG 153
SC EG + N TC A FLI S+ +SI D E G ++ Q +V +G+ ++
Sbjct: 27 SCPEGTLAGNGNSTCVG---PAPFLIFSHGNSIFRIDTE--GTNYE-QLVVDAGVSVIMD 80
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRWL--- 208
Y+ IYW+D ++ NG+ R+ + N++ GM ++ W+
Sbjct: 81 FHYN--EKRIYWVDLERQLLQRVFLNGSRQERVCNIEKNVS---GMAIN------WINEE 129
Query: 209 -FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKL 259
W++ E I M G+N S I+ + + +P + +D R ++++ + L
Sbjct: 130 VIWSNQQEG-IITVTDMKGNN-SHILLSALKYPANVAVDPVERFIFWSSEVAGSLYRADL 187
Query: 260 DFIDCKSL----EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D + K+L E T V+ + ++L+WI G I + DG + I +
Sbjct: 188 DGVGVKALLETSEKITAVSLDVLDKRLFWIQYNREGSNSLICSCDYDGGSVHISKHPTQH 247
Query: 316 EALALDLENGMLYYSTLK 333
A+ L ++YST K
Sbjct: 248 NLFAMSLFGDRIFYSTWK 265
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 10/55 (18%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNECEQ------PGYCSQMCTNTKGSYICSCNEGY 99
A C C G + D C D++ECE P S C NT+G Y+C C+EGY
Sbjct: 853 ATCQCLKG--FAGDGKLCSDIDECEMGVPVCPPA--SSKCINTEGGYVCRCSEGY 903
>gi|158300940|ref|XP_320740.4| AGAP011770-PA [Anopheles gambiae str. PEST]
gi|157013400|gb|EAA00402.5| AGAP011770-PA [Anopheles gambiae str. PEST]
Length = 1619
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 196/435 (45%), Gaps = 67/435 (15%)
Query: 33 CKHKFGLCSNTC---HPTPLGALCTCPPGEILSNDSVTC----QDMNECEQPGYCSQMCT 85
C+ G CS+ C P G C CP G L + C QDM Q +++
Sbjct: 277 CRRNNGNCSHLCLLSTIAPAGYSCACPTGIKLLT-ATQCADGPQDMLFVVQRSQINRISL 335
Query: 86 NTKGSYICSCNEGYVLEYDNHTCKAINHSAA--FLIISNRHSILVADLEEKGKDHRAQDI 143
++ I G L Y AI++ ++ S++ + G A++I
Sbjct: 336 DSPDYSIVPLPAGK-LRY----AIAIDYDPVENYVYWSDKEESAIKRARADGTGGPAEEI 390
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
V + + +GLA DW+ ++YW D+ +RI+VC +G+ R VL DN+ +PR + L P+
Sbjct: 391 VTAEIQAPDGLAIDWLARNLYWTDTGTDRIQVCRLDGSFRRVLIYDNLVEPRAIALAPTL 450
Query: 204 GTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G W+FW+DWG + P+IER +DG+ R I+S + WPNG+ LD+ R++Y+ D+K D I
Sbjct: 451 G--WMFWSDWGAKEPKIERASLDGTERVLIVSQNLIWPNGIALDVGARKIYWCDAKADTI 508
Query: 263 DCKSLE-------IKTNVNY----STIFRKLYWIDEGGNGVP------------------ 293
+ +++ + N+ + S + LYW D +
Sbjct: 509 EVANMDGSGRNTILSDNLPHVFGLSLLGDYLYWTDWQRRSIDRAHKLTGAERATIGENIA 568
Query: 294 ----LKIGKAN-MDGSNASILVSGQLYE-----------ALALDLENGMLYYSTLKCTRW 337
LK+ + + + G+N + +G + LD E G + L +
Sbjct: 569 ELMGLKVTRLHEVQGTNPCAVANGGCSQLCLNRPRDYVCRCQLDYELGRDNRTCLVPAAF 628
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
L +++ G I R+ +D N + + + + L +D+A RR+Y+ K +I
Sbjct: 629 LLFSNHGS---IGRLSIDSHNHADYAPFRNVVDAHYLDVDVADRRIYWVSQKQKYISRAY 685
Query: 397 YDGTGRQQVILIDLM 411
+G+ Q+++ LM
Sbjct: 686 INGSDVQRIVETGLM 700
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 81/142 (57%), Gaps = 7/142 (4%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GLD EGLA DW +YW D NRIEV N + VL ++ QPR + L
Sbjct: 76 VITDGLDKPEGLAIDWYTDKLYWTDGESNRIEVAANNARLQKVLIWSDLDQPRAIAL--V 133
Query: 203 PGTRWLFWTDWGENPRIERIGMDG--SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P R++ WTDWGE+P+IER MDG +R+ +++ +I+WPNGL +D+ +Y+ D
Sbjct: 134 PARRYMIWTDWGESPKIERASMDGDPQSRTVLVNDRIFWPNGLAVDLEQELIYWVDGNQR 193
Query: 261 FIDCKSLEIKTNVNYSTIFRKL 282
F+D L+ N T+ R L
Sbjct: 194 FLDVMDLD---GGNRRTLVRNL 212
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 108/229 (47%), Gaps = 47/229 (20%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN--RSTIISTKIYWPNGLTLDIATRRVY 253
+ +D P +++W+D E I+R DG+ I++ +I P+GL +D
Sbjct: 353 AIAIDYDPVENYVYWSD-KEESAIKRARADGTGGPAEEIVTAEIQAPDGLAIDW------ 405
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+ R LYW D G + +I +DGS +L+
Sbjct: 406 ------------------------LARNLYWTDTGTD----RIQVCRLDGSFRRVLIYDN 437
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTKIYWPNG 372
L E A+ L + W+FW+DWG + P+IER +DG+ R I+S + WPNG
Sbjct: 438 LVEPRAIALAPTL---------GWMFWSDWGAKEPKIERASLDGTERVLIVSQNLIWPNG 488
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+ LD+ R++Y+ D+K D I+ N DG+GR ++ +L F L+GD
Sbjct: 489 IALDVGARKIYWCDAKADTIEVANMDGSGRNTILSDNLPHVFGLSLLGD 537
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 140/356 (39%), Gaps = 92/356 (25%)
Query: 69 QDMNECEQP-GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI- 126
Q N C G CSQ+C N Y+C C Y L DN TC AAFL+ SN SI
Sbjct: 582 QGTNPCAVANGGCSQLCLNRPRDYVCRCQLDYELGRDNRTCLV---PAAFLLFSNHGSIG 638
Query: 127 -----------------------LVADLEEK------------------GKDHRAQDIVV 145
L D+ ++ G D Q IV
Sbjct: 639 RLSIDSHNHADYAPFRNVVDAHYLDVDVADRRIYWVSQKQKYISRAYINGSD--VQRIVE 696
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL EG+A DW+ ++YW D+ RIEV +G++R +L I +P+ ++L+P G
Sbjct: 697 TGLMQPEGIAVDWLAHNVYWTDADARRIEVARLDGSSRRILIWKGIEEPKNLILEPRKGL 756
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
++WT+W + I R MDG + TIIS + GLTLD TRR+Y+A
Sbjct: 757 --MYWTEWPSD-SIRRAAMDGGDLLTIISGANH-AIGLTLDPDTRRLYWAR--------- 803
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
P I A+ DG + LV ++ N
Sbjct: 804 ------------------------QSSPTGIESADWDGKRRTRLVMADAADS------NR 833
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 381
+ + W++W DW + I R + TI+ T + + L A R+
Sbjct: 834 FVPVALTIYQDWVYWADWTTD-EIGRANKTTGDNRTIVHTNLKYTYALLAFHAGRQ 888
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 15/128 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFW 340
KLYW D N + + A + +L+ L + A+ L + R++ W
Sbjct: 95 KLYWTDGESNRIEVAANNARLQ----KVLIWSDLDQPRAIAL---------VPARRYMIW 141
Query: 341 TDWGENPRIERIGMDG--SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
TDWGE+P+IER MDG +R+ +++ +I+WPNGL +D+ +Y+ D F+D + D
Sbjct: 142 TDWGESPKIERASMDGDPQSRTVLVNDRIFWPNGLAVDLEQELIYWVDGNQRFLDVMDLD 201
Query: 399 GTGRQQVI 406
G R+ ++
Sbjct: 202 GGNRRTLV 209
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 105/270 (38%), Gaps = 62/270 (22%)
Query: 72 NECE-QPGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
N+C G C+ +C + C+C Y L + +C + ++I S R+S
Sbjct: 892 NQCRTNNGGCTHLCLAQGQRKMTCACPTHYTLNANRVSCSPPRN---YIIFSQRNSF--G 946
Query: 130 DLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
D + V+G + + + YD + HIYW+D R I +NGTN V + +
Sbjct: 947 RFVPNTADSPDIPLPVTGKN-IRAVEYDVLTRHIYWIDGRGPIIRRAFDNGTNAKV-SIN 1004
Query: 190 NITQPRGMMLDP-------------------------------------------SPGTR 206
+ P M +DP P R
Sbjct: 1005 PTSSPFDMAIDPIGRLLFWSCSHTNTINITTLDGNIASIGNVDIGRTEKPRSLALHPMKR 1064
Query: 207 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK-LDFIDCK 265
LFWTD G I R +DGS R +I TK+ L LD R+++A K +D +D
Sbjct: 1065 LLFWTDVGSAQSITRAKLDGSQRVELI-TKLEGIQALALDPQLNRLFYAHGKRIDTMDIN 1123
Query: 266 SLEIKTNV--------NYSTIFRKLYWIDE 287
+++T V + + + +YW+DE
Sbjct: 1124 GQDVRTLVAEHISMVSSIAALDGFIYWLDE 1153
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 155/372 (41%), Gaps = 66/372 (17%)
Query: 111 INHSAAFLIISNRHSILVADLEEKGKDHRA------QDIVVSGLDLV---EGLAYDWIGG 161
++ A ++ R ++ D E K RA Q V D + GLA D
Sbjct: 124 LDQPRAIALVPARRYMIWTDWGESPKIERASMDGDPQSRTVLVNDRIFWPNGLAVDLEQE 183
Query: 162 HIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP---- 217
IYW+D ++V D +G NR L + N+ P + + +LFWTDW +
Sbjct: 184 LIYWVDGNQRFLDVMDLDGGNRRTLVR-NLDYPYSLTFTAN----FLFWTDWKDGTLHYY 238
Query: 218 RIERIGMDGSNRSTIISTKIY-WPNGLTLDIAT------RRVYFADSKLDFIDC------ 264
I+R R T + ++ W L + AT RR S L +
Sbjct: 239 DIQRDRHKELLRKTEVPITVHAWDGRLQPEAATDASNPCRRNNGNCSHLCLLSTIAPAGY 298
Query: 265 -----KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI--LVSGQLYEA 317
+++ T + + + ++ + +I + ++D + SI L +G+L A
Sbjct: 299 SCACPTGIKLLTATQCADGPQDMLFVVQRS-----QINRISLDSPDYSIVPLPAGKLRYA 353
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSN--RSTIISTKIYWPNGLTL 375
+A+D + +++W+D E I+R DG+ I++ +I P+GL +
Sbjct: 354 IAIDYD---------PVENYVYWSD-KEESAIKRARADGTGGPAEEIVTAEIQAPDGLAI 403
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGM 435
D R +Y+ D+ D I C DG+ R +V++ D +VE A+AL G
Sbjct: 404 DWLARNLYWTDTGTDRIQVCRLDGSFR-RVLIYDNLVEPR----------AIALAPTLGW 452
Query: 436 LYYSTEGAEFLK 447
+++S GA+ K
Sbjct: 453 MFWSDWGAKEPK 464
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 33/166 (19%)
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKS-------------LEIKTNV 273
++++T+I+ + P GL +D T ++Y+ D + + I+ + L+ +
Sbjct: 71 TSKTTVITDGLDKPEGLAIDWYTDKLYWTDGESNRIEVAANNARLQKVLIWSDLDQPRAI 130
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS--ILVSGQLY--EALALDLENGMLYY 329
R + W D G + KI +A+MDG S +LV+ +++ LA+DLE ++Y
Sbjct: 131 ALVPARRYMIWTDWGESP---KIERASMDGDPQSRTVLVNDRIFWPNGLAVDLEQELIY- 186
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
W D G ++ + +DG NR T++ Y P LT
Sbjct: 187 ----------WVD-GNQRFLDVMDLDGGNRRTLVRNLDY-PYSLTF 220
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 71/173 (41%), Gaps = 31/173 (17%)
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS-------------TIFRKLYWIDEG 288
+ D+ TR +Y+ D + I ++ + TN S I R L+W
Sbjct: 969 AVEYDVLTRHIYWIDGRGPIIR-RAFDNGTNAKVSINPTSSPFDMAIDPIGRLLFWSCSH 1027
Query: 289 GNGVPLKIGKANMDGSNASI--LVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
N I +DG+ ASI + G+ + +L L R LFWTD G
Sbjct: 1028 TN----TINITTLDGNIASIGNVDIGRTEKPRSLALH---------PMKRLLFWTDVGSA 1074
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK-LDFIDFCNYD 398
I R +DGS R +I TK+ L LD R+++A K +D +D D
Sbjct: 1075 QSITRAKLDGSQRVELI-TKLEGIQALALDPQLNRLFYAHGKRIDTMDINGQD 1126
>gi|355687539|gb|EHH26123.1| hypothetical protein EGK_16015 [Macaca mulatta]
Length = 1207
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 132/281 (46%), Gaps = 48/281 (17%)
Query: 30 LAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQP--GYCSQMCTN- 86
L C CS+ C T G LC CP G +L D TC + C P G CSQ+C
Sbjct: 398 LVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SGCSSPDNGGCSQLCIPL 454
Query: 87 TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI-------------------L 127
+ S+ C C GY L+ D +C A + FL+ +N I +
Sbjct: 455 SPVSWKCDCFPGYDLQLDKKSCVA-SGPQPFLLFANSQDIRHMHFDGTDYGTLLSQQMGM 513
Query: 128 VADLEEKGKDHR--------------------AQDIVVSGLDLVEGLAYDWIGGHIYWLD 167
V L+ +++ + ++ G+D+ EGLA DWIG YW D
Sbjct: 514 VYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEGVDVPEGLAVDWIGRRFYWTD 573
Query: 168 SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227
+ I D NG + ++ K+NI+QPRG+ + P + LFWTD G NPRIE + G
Sbjct: 574 RGKSLIGRSDLNGKHPKIIIKENISQPRGIAVHPM--AKRLFWTDTGINPRIESSSLQGL 631
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
R I S+ + WPNG+T+D T ++Y+ D+K I+ +L+
Sbjct: 632 GRLVIASSDLIWPNGITIDFLTDKLYWCDAKQSVIEMANLD 672
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 172/427 (40%), Gaps = 89/427 (20%)
Query: 34 KHKFGLCSNT-CHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGSY 91
K + G CS+T C LCTC G LS D C+D+NEC + C+ C NT GSY
Sbjct: 319 KLRKGNCSSTVCGQDAQSHLCTCAEGYALSRDRKYCEDVNECAFWNHGCTLGCKNTPGSY 378
Query: 92 ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD-----------LEEKGK---- 136
C+C G+VL D C + + + + +L ++ LE GK
Sbjct: 379 YCTCPVGFVLLPDGKRCHQLVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTCSG 438
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN-- 190
D+ + L V D G+ LD + C +G +L ++
Sbjct: 439 CSSPDNGGCSQLCIPLSPVS-WKCDCFPGYDLQLDKK-----SCVASGPQPFLLFANSQD 492
Query: 191 --------------ITQPRGMM--LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
++Q GM+ LD P +++ IER MDGS R +I
Sbjct: 493 IRHMHFDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALK-WIERANMDGSQRERLIE 551
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
+ P GL +D I R+ YW D G +
Sbjct: 552 EGVDVPEGLAVDW------------------------------IGRRFYWTDRGKS---- 577
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
IG+++++G + I++ + + + + + LFWTD G NPRIE +
Sbjct: 578 LIGRSDLNGKHPKIIIKENISQPRGIAVH---------PMAKRLFWTDTGINPRIESSSL 628
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
G R I S+ + WPNG+T+D T ++Y+ D+K I+ N DG+ R+ + D+ F
Sbjct: 629 QGLGRLVIASSDLIWPNGITIDFLTDKLYWCDAKQSVIEMANLDGSKRRTLTQNDVGHPF 688
Query: 415 TNDLMGD 421
+ D
Sbjct: 689 AIAVFED 695
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 114/268 (42%), Gaps = 37/268 (13%)
Query: 84 CTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDI 143
C + SC EG + N T A FLI S+ +SI D E G ++ +
Sbjct: 17 CVSLSAPQHWSCPEGTPAGHGNSTRVG---PAPFLIFSHGNSIFRIDTE--GTNYEPL-V 70
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDP 201
V +G+ ++ + + + IYW+D ++ NG+ R+ + N++ GM ++
Sbjct: 71 VDAGVSVI--MDFHYKEKTIYWVDLERQLLQRVFLNGSRQERVCNIEKNVS---GMAIN- 124
Query: 202 SPGTRWL----FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD- 256
W+ W++ E I M G+N ++S + +P + +D R ++++
Sbjct: 125 -----WINEEVIWSNQQEG-IITVTNMKGNNSHVLLSA-LKYPANIAVDPVERFIFWSSE 177
Query: 257 -------SKLDFIDCKSL----EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305
+ LD ++ KSL E T V+ + ++L+WI G I + DG +
Sbjct: 178 VAGSLYRADLDGVEVKSLLETSEKITAVSLDVLDKRLFWIQYSREGSNSLICSCDYDGGS 237
Query: 306 ASILVSGQLYEALALDLENGMLYYSTLK 333
+ + A+ L ++YST K
Sbjct: 238 VHVSKHPTQHNLFAMSLFGDHVFYSTWK 265
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 10/53 (18%)
Query: 53 CTCPPGEILSNDSVTCQDMNECEQ------PGYCSQMCTNTKGSYICSCNEGY 99
C C G + D + C D++ECE P S C NT+G Y+C C+EGY
Sbjct: 855 CQCLKG--FAGDGILCSDIDECEMGVPVCPPA--SSKCINTEGGYVCQCSEGY 903
>gi|402870229|ref|XP_003899139.1| PREDICTED: LOW QUALITY PROTEIN: pro-epidermal growth factor [Papio
anubis]
Length = 1206
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 138/297 (46%), Gaps = 52/297 (17%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C L C CS+ C T G LC CP G +L D TC +
Sbjct: 382 CPVGFVLLPDGKRCHQLVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SG 438
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---- 126
C P G CSQ+C + S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 439 CSSPDNGGCSQLCIPLSPVSWECDCFPGYDLQLDKKSCVA-SGPQPFLLFANSQDIRHMH 497
Query: 127 ---------------LVADLEEKGKDHR--------------------AQDIVVSGLDLV 151
+V L+ +++ + ++ G+D+
Sbjct: 498 FDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEGVDVP 557
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EGLA DWIG YW D + I D NG + ++ K+NI+QPRG+ + P + LFWT
Sbjct: 558 EGLAVDWIGRRFYWTDRGKSLIGRSDLNGKHPKIIIKENISQPRGIAVHPM--AKRLFWT 615
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
D G NPRIE + G R I S+ + WPNG+T+D T ++Y+ D+K I+ +L+
Sbjct: 616 DTGINPRIESSSLQGLGRLVIASSDLIWPNGITIDFLTDKLYWCDAKQSVIEMANLD 672
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 172/427 (40%), Gaps = 89/427 (20%)
Query: 34 KHKFGLCSNT-CHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGSY 91
K + G CS+T C LCTC G LS D C+D+NEC + C+ C NT GSY
Sbjct: 319 KSRKGNCSSTVCGQDAQSHLCTCAEGYALSRDRKYCEDVNECAFWNHGCTLGCKNTPGSY 378
Query: 92 ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD-----------LEEKGK---- 136
C+C G+VL D C + + + + +L ++ LE GK
Sbjct: 379 YCTCPVGFVLLPDGKRCHQLVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTCSG 438
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN-- 190
D+ + L V D G+ LD + C +G +L ++
Sbjct: 439 CSSPDNGGCSQLCIPLSPVS-WECDCFPGYDLQLDKK-----SCVASGPQPFLLFANSQD 492
Query: 191 --------------ITQPRGMM--LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
++Q GM+ LD P +++ IER MDGS R +I
Sbjct: 493 IRHMHFDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALK-WIERANMDGSQRERLIE 551
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
+ P GL +D I R+ YW D G +
Sbjct: 552 EGVDVPEGLAVDW------------------------------IGRRFYWTDRGKS---- 577
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
IG+++++G + I++ + + + + + LFWTD G NPRIE +
Sbjct: 578 LIGRSDLNGKHPKIIIKENISQPRGIAVH---------PMAKRLFWTDTGINPRIESSSL 628
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
G R I S+ + WPNG+T+D T ++Y+ D+K I+ N DG+ R+ + D+ F
Sbjct: 629 QGLGRLVIASSDLIWPNGITIDFLTDKLYWCDAKQSVIEMANLDGSKRRTLTQNDVGHPF 688
Query: 415 TNDLMGD 421
+ D
Sbjct: 689 AVAVFED 695
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 115/268 (42%), Gaps = 37/268 (13%)
Query: 84 CTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDI 143
C + SC EG + N T A FLI S+ +SI D E G ++ +
Sbjct: 17 CVSLSAPQHWSCPEGTPAGHGNSTRVG---PAPFLIFSHGNSIFRIDTE--GTNYEPL-V 70
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDP 201
V +G+ ++ + + + IYW+D ++ NG+ R+ + N++ GM ++
Sbjct: 71 VDAGVSVI--MDFHYKEKTIYWVDLERQLLQRVFLNGSRQERVCNIEKNVS---GMAIN- 124
Query: 202 SPGTRWL----FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD- 256
W+ W++ E I M G+N ++S + +P + +D R ++++
Sbjct: 125 -----WINEEVIWSNQQEG-IITVTDMKGNNSHVLLSA-LKYPANIAVDPVERFIFWSSE 177
Query: 257 -------SKLDFIDCKSL----EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305
+ LD ++ KSL E T V+ + ++L+WI G IG + DG +
Sbjct: 178 VAGSLYRADLDGVEVKSLLETSEKITAVSLDVLDKRLFWIQYSREGSNSLIGSCDYDGGS 237
Query: 306 ASILVSGQLYEALALDLENGMLYYSTLK 333
+ + A+ L ++YST K
Sbjct: 238 VRVSKHPTQHNLFAMSLFGDHVFYSTWK 265
>gi|296011013|ref|NP_001171601.1| pro-epidermal growth factor isoform 2 preproprotein [Homo sapiens]
Length = 1166
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 137/297 (46%), Gaps = 52/297 (17%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C L C CS+ C T G LC CP G +L D TC +
Sbjct: 382 CPVGFVLLPDGKRCHQLVSCPRNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SG 438
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---- 126
C P G CSQ+C + S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 439 CSSPDNGGCSQLCVPLSPVSWECDCFPGYDLQLDEKSCAA-SGPQPFLLFANSQDIRHMH 497
Query: 127 ---------------LVADLEEKGKDHR--------------------AQDIVVSGLDLV 151
+V L+ +++ + ++ G+D+
Sbjct: 498 FDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEGVDVP 557
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EGLA DWIG YW D + I D NG ++ K+NI+QPRG+ + P + LFWT
Sbjct: 558 EGLAVDWIGRRFYWTDRGKSLIGRSDLNGKRSKIITKENISQPRGIAVHPM--AKRLFWT 615
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
D G NPRIE + G R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 616 DTGINPRIESSSLQGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLD 672
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 171/428 (39%), Gaps = 89/428 (20%)
Query: 33 CKHKFGLCSNT-CHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGS 90
CK + G CS+T C LC C G LS D C+D+NEC + C+ C NT GS
Sbjct: 318 CKLRKGNCSSTVCGQDLQSHLCMCAEGYALSRDRKYCEDVNECAFWNHGCTLGCKNTPGS 377
Query: 91 YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD-----------LEEKGK--- 136
Y C+C G+VL D C + + + +L ++ LE GK
Sbjct: 378 YYCTCPVGFVLLPDGKRCHQLVSCPRNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTCS 437
Query: 137 -----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN- 190
D+ + L V D G+ LD + C +G +L ++
Sbjct: 438 GCSSPDNGGCSQLCVPLSPVS-WECDCFPGYDLQLDEK-----SCAASGPQPFLLFANSQ 491
Query: 191 ---------------ITQPRGMM--LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
++Q GM+ LD P +++ IER MDGS R +I
Sbjct: 492 DIRHMHFDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALK-WIERANMDGSQRERLI 550
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
+ P GL +D I R+ YW D G +
Sbjct: 551 EEGVDVPEGLAVDW------------------------------IGRRFYWTDRGKS--- 577
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
IG+++++G + I+ + + + + + LFWTD G NPRIE
Sbjct: 578 -LIGRSDLNGKRSKIITKENISQPRGIAVH---------PMAKRLFWTDTGINPRIESSS 627
Query: 354 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
+ G R I S+ + WP+G+T+D T ++Y+ D+K I+ N DG+ R+++ D+
Sbjct: 628 LQGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLDGSKRRRLTQNDVGHP 687
Query: 414 FTNDLMGD 421
F + D
Sbjct: 688 FAVAVFED 695
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 37/258 (14%)
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEG 153
SC EG + N TC A FLI S+ +SI D E G ++ Q +V +G+ ++
Sbjct: 27 SCPEGTLAGNGNSTCVG---PAPFLIFSHGNSIFRIDTE--GTNYE-QLVVDAGVSVIMD 80
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRWL--- 208
Y+ IYW+D ++ NG+ R+ + N++ GM ++ W+
Sbjct: 81 FHYN--EKRIYWVDLERQLLQRVFLNGSRQERVCNIEKNVS---GMAIN------WINEE 129
Query: 209 -FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKL 259
W++ E I M G+N S I+ + + +P + +D R ++++ + L
Sbjct: 130 VIWSNQQEG-IITVTDMKGNN-SHILLSALKYPANVAVDPVERFIFWSSEVAGSLYRADL 187
Query: 260 DFIDCKSL----EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D + K+L E T V+ + ++L+WI G I + DG + I +
Sbjct: 188 DGVGVKALLETSEKITAVSLDVLDKRLFWIQYNREGSNSLICSCDYDGGSVHISKHPTQH 247
Query: 316 EALALDLENGMLYYSTLK 333
A+ L ++YST K
Sbjct: 248 NLFAMSLFGDRIFYSTWK 265
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 10/55 (18%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNECEQ------PGYCSQMCTNTKGSYICSCNEGY 99
A C C G + D C D++ECE P S C NT+G Y+C C+EGY
Sbjct: 853 ATCQCLKG--FAGDGKLCSDIDECEMGVPVCPPA--SSKCINTEGGYVCRCSEGY 903
>gi|40288425|gb|AAR84237.1| truncated epidermal growth factor (beta-urogastrone) [Homo sapiens]
Length = 1152
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 137/297 (46%), Gaps = 52/297 (17%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C L C CS+ C T G LC CP G +L D TC +
Sbjct: 382 CPVGFVLLPDGKRCHQLVSCPRNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SG 438
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---- 126
C P G CSQ+C + S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 439 CSSPDNGGCSQLCVPLSPVSWECDCFPGYDLQLDEKSCAA-SGPQPFLLFANSQDIRHMH 497
Query: 127 ---------------LVADLEEKGKDHR--------------------AQDIVVSGLDLV 151
+V L+ +++ + ++ G+D+
Sbjct: 498 FDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEGVDVP 557
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EGLA DWIG YW D + I D NG ++ K+NI+QPRG+ + P + LFWT
Sbjct: 558 EGLAVDWIGRRFYWTDRGKSLIGRSDLNGKRSKIITKENISQPRGIAVHPM--AKRLFWT 615
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
D G NPRIE + G R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 616 DTGINPRIESSSLQGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLD 672
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 171/428 (39%), Gaps = 89/428 (20%)
Query: 33 CKHKFGLCSNT-CHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGS 90
CK + G CS+T C LC C G LS D C+D+NEC + C+ C NT GS
Sbjct: 318 CKLRKGNCSSTVCGQDLQSHLCMCAEGYALSRDRKYCEDVNECAFWNHGCTLGCKNTPGS 377
Query: 91 YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD-----------LEEKGK--- 136
Y C+C G+VL D C + + + +L ++ LE GK
Sbjct: 378 YYCTCPVGFVLLPDGKRCHQLVSCPRNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTCS 437
Query: 137 -----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN- 190
D+ + L V D G+ LD + C +G +L ++
Sbjct: 438 GCSSPDNGGCSQLCVPLSPVS-WECDCFPGYDLQLDEK-----SCAASGPQPFLLFANSQ 491
Query: 191 ---------------ITQPRGMM--LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
++Q GM+ LD P +++ IER MDGS R +I
Sbjct: 492 DIRHMHFDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALK-WIERANMDGSQRERLI 550
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
+ P GL +D I R+ YW D G +
Sbjct: 551 EEGVDVPEGLAVDW------------------------------IGRRFYWTDRGKS--- 577
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
IG+++++G + I+ + + + + + LFWTD G NPRIE
Sbjct: 578 -LIGRSDLNGKRSKIITKENISQPRGIAVH---------PMAKRLFWTDTGINPRIESSS 627
Query: 354 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
+ G R I S+ + WP+G+T+D T ++Y+ D+K I+ N DG+ R+++ D+
Sbjct: 628 LQGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLDGSKRRRLTQNDVGHP 687
Query: 414 FTNDLMGD 421
F + D
Sbjct: 688 FAVAVFED 695
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 37/258 (14%)
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEG 153
SC EG + N TC A FLI S+ +SI D E G ++ Q +V +G+ ++
Sbjct: 27 SCPEGTLAGNGNSTCVG---PAPFLIFSHGNSIFRIDTE--GTNYE-QLVVDAGVSVIMD 80
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRWL--- 208
Y+ IYW+D ++ NG+ R+ + N++ GM ++ W+
Sbjct: 81 FHYN--EKRIYWVDLERQLLQRVFLNGSRQERVCNIEKNVS---GMAIN------WINEE 129
Query: 209 -FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKL 259
W++ E I M G+N S I+ + + +P + +D R ++++ + L
Sbjct: 130 VIWSNQQEG-IITVTDMKGNN-SHILLSALKYPANVAVDPVERFIFWSSEVAGSLYRADL 187
Query: 260 DFIDCKSL----EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D + K+L E T V+ + ++L+WI G I + DG + I +
Sbjct: 188 DGVGVKALLETSEKITAVSLDVLDKRLFWIQYNREGSNSLICSCDYDGGSVHISKHPTQH 247
Query: 316 EALALDLENGMLYYSTLK 333
A+ L ++YST K
Sbjct: 248 NLFAMSLFGDRIFYSTWK 265
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 10/55 (18%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNECEQ------PGYCSQMCTNTKGSYICSCNEGY 99
A C C G + D C D++ECE P S C NT+G Y+C C+EGY
Sbjct: 853 ATCQCLKG--FAGDGKLCSDIDECEMGVPVCPPA--SSKCINTEGGYVCRCSEGY 903
>gi|194387812|dbj|BAG61319.1| unnamed protein product [Homo sapiens]
Length = 1165
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 137/297 (46%), Gaps = 52/297 (17%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C L C CS+ C T G LC CP G +L D TC +
Sbjct: 340 CPVGFVLLPDGKRCHQLVSCPRNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SG 396
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---- 126
C P G CSQ+C + S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 397 CSSPDNGGCSQLCVPLSPVSWECDCFPGYDLQLDEKSCAA-SGPQPFLLFANSQDIRHMH 455
Query: 127 ---------------LVADLEEKGKDHR--------------------AQDIVVSGLDLV 151
+V L+ +++ + ++ G+D+
Sbjct: 456 FDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEGVDVP 515
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EGLA DWIG YW D + I D NG ++ K+NI+QPRG+ + P + LFWT
Sbjct: 516 EGLAVDWIGRRFYWTDRGKSLIGRSDLNGKRSKIITKENISQPRGIAVHPM--AKRLFWT 573
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
D G NPRIE + G R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 574 DTGINPRIESSSLQGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLD 630
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 37/258 (14%)
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEG 153
SC EG + N TC A FLI S+ +SI D E G ++ Q +V +G+ ++
Sbjct: 27 SCPEGTLAGNGNSTCVG---PAPFLIFSHGNSIFRIDTE--GTNYE-QLVVDAGVSVIMD 80
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRWL--- 208
Y+ IYW+D ++ NG+ R+ + N++ GM ++ W+
Sbjct: 81 FHYN--EKRIYWVDLERQLLQRVFLNGSRQERVCNIEKNVS---GMAIN------WINEE 129
Query: 209 -FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKL 259
W++ E I M G+N S I+ + + +P + +D R ++++ + L
Sbjct: 130 VIWSNQQEG-IITVTDMKGNN-SHILLSALKYPANVAVDPVERFIFWSSEVAGSLYRADL 187
Query: 260 DFIDCKSL----EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D + K+L E T V+ + ++L+WI G I + DG + I +
Sbjct: 188 DGVGVKALLETSEKITAVSLDVLDKRLFWIQYNREGSNSLICSCDYDGGSVHISKHPTQH 247
Query: 316 EALALDLENGMLYYSTLK 333
A+ L ++YST K
Sbjct: 248 NLFAMSLFGDRIFYSTWK 265
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 10/55 (18%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNECEQ------PGYCSQMCTNTKGSYICSCNEGY 99
A C C G + D C D++ECE P S C NT+G Y+C C+EGY
Sbjct: 811 ATCQCLKG--FAGDGKLCSDIDECEMGVPVCPPA--SSKCINTEGGYVCRCSEGY 861
>gi|397519858|ref|XP_003830070.1| PREDICTED: pro-epidermal growth factor isoform 2 [Pan paniscus]
Length = 1165
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 138/297 (46%), Gaps = 52/297 (17%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C L C CS+ C T G LC CP G +L D TC +
Sbjct: 340 CPVGFVLLPDGKRCHQLVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SG 396
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---- 126
C P G CSQ+C + S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 397 CSSPDNGGCSQLCIPLSPVSWECDCFPGYDLQLDKKSCAA-SGPQPFLLFANSQDIRHMH 455
Query: 127 ---------------LVADLEEKGKDHR--------------------AQDIVVSGLDLV 151
+V L+ +++ + ++ G+D+
Sbjct: 456 FDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEGVDVP 515
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EGLA DWIG YW D + I D NG ++AK+N++QPRG+ + P + LFWT
Sbjct: 516 EGLAVDWIGRRFYWTDRGKSLIGRSDLNGKRSKIIAKENLSQPRGIAIHPM--AKRLFWT 573
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
D G NPRIE + G R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 574 DTGINPRIESSSLQGLGRLIIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLD 630
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 37/258 (14%)
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEG 153
SC EG + N TC A FLI S+ +SI D E G ++ Q +V +G+ ++
Sbjct: 27 SCPEGTLAGNGNSTCVG---PAPFLIFSHGNSIFRIDTE--GTNYE-QLVVDAGVSVIMD 80
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRWL--- 208
Y+ IYW+D ++ NG+ R+ + N++ GM ++ W+
Sbjct: 81 FHYN--EKRIYWVDLERQLLQRVFLNGSRQERVCNIEKNVS---GMAIN------WINEE 129
Query: 209 -FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKL 259
W++ E I M G+N S I+ + + +P + +D R ++++ + L
Sbjct: 130 VIWSNQQEG-IITVTDMKGNN-SHILLSALKYPANVAVDPVERFIFWSSEVAGSLYRADL 187
Query: 260 DFIDCKSL----EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D + K+L E T V+ + ++L+WI G I + DG + I +
Sbjct: 188 DGVGVKALLETSEKITAVSLDVLDKRLFWIQYNREGSNSLICSCDYDGGSVHISKHPTQH 247
Query: 316 EALALDLENGMLYYSTLK 333
A+ L ++YST K
Sbjct: 248 NLFAMSLFGDRIFYSTWK 265
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 10/55 (18%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNECEQ------PGYCSQMCTNTKGSYICSCNEGY 99
A C C G + D C D++ECE P S C NT+G Y+C C+EGY
Sbjct: 811 ATCQCLKG--FAGDGKLCSDIDECEMGVPVCPPA--SSKCINTEGGYVCRCSEGY 861
>gi|297293228|ref|XP_002804220.1| PREDICTED: pro-epidermal growth factor isoform 2 [Macaca mulatta]
Length = 1166
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 132/281 (46%), Gaps = 48/281 (17%)
Query: 30 LAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQP--GYCSQMCTN- 86
L C CS+ C T G LC CP G +L D TC + C P G CSQ+C
Sbjct: 356 LVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SGCSSPDNGGCSQLCIPL 412
Query: 87 TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI-------------------L 127
+ S+ C C GY L+ D +C A + FL+ +N I +
Sbjct: 413 SPVSWECDCFPGYDLQLDKKSCVA-SGPQPFLLFANSQDIRHMHFDGTDYGTLLSQQMGM 471
Query: 128 VADLEEKGKDHR--------------------AQDIVVSGLDLVEGLAYDWIGGHIYWLD 167
V L+ +++ + ++ G+D+ EGLA DWIG YW D
Sbjct: 472 VYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEGVDVPEGLAVDWIGRRFYWTD 531
Query: 168 SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227
+ I D NG + ++ K+NI+QPRG+ + P + LFWTD G NPRIE + G
Sbjct: 532 RGKSLIGRSDLNGKHPKIIIKENISQPRGIAVHPM--AKRLFWTDTGINPRIESSSLQGL 589
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
R I S+ + WPNG+T+D T ++Y+ D+K I+ +L+
Sbjct: 590 GRLVIASSDLIWPNGITIDFLTDKLYWCDAKQSVIEMANLD 630
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 71/187 (37%), Gaps = 43/187 (22%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
V G+A +WI + W + + I V D G N VL + P + +DP R++FW
Sbjct: 118 VSGMAINWINEEVIWSNQQEGIITVTDMKGNNSHVLLS-ALKYPANIAVDPV--ERFIFW 174
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL--- 267
+ E G +Y AD LD ++ KSL
Sbjct: 175 SS-------EVAG---------------------------SLYRAD--LDGVEVKSLLET 198
Query: 268 -EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGM 326
E T V+ + ++L+WI G I + DG + + + A+ L
Sbjct: 199 SEKITAVSLDVLDKRLFWIQYSREGSNSLICSCDYDGGSVHVSKHPTQHNLFAMSLFGDH 258
Query: 327 LYYSTLK 333
++YST K
Sbjct: 259 VFYSTWK 265
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 10/53 (18%)
Query: 53 CTCPPGEILSNDSVTCQDMNECEQ------PGYCSQMCTNTKGSYICSCNEGY 99
C C G + D + C D++ECE P S C NT+G Y+C C+EGY
Sbjct: 813 CQCLKG--FAGDGILCSDIDECEMGVPVCPPA--SSKCINTEGGYVCQCSEGY 861
>gi|31121|emb|CAA28240.1| unnamed protein product [Homo sapiens]
gi|62740195|gb|AAH93731.1| Epidermal growth factor (beta-urogastrone) [Homo sapiens]
gi|109731271|gb|AAI13462.1| Epidermal growth factor (beta-urogastrone) [Homo sapiens]
Length = 1207
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 137/297 (46%), Gaps = 52/297 (17%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C L C CS+ C T G LC CP G +L D TC +
Sbjct: 382 CPVGFVLLPDGKRCHQLVSCPRNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SG 438
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---- 126
C P G CSQ+C + S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 439 CSSPDNGGCSQLCVPLSPVSWECDCFPGYDLQLDEKSCAA-SGPQPFLLFANSQDIRHMH 497
Query: 127 ---------------LVADLEEKGKDHR--------------------AQDIVVSGLDLV 151
+V L+ +++ + ++ G+D+
Sbjct: 498 FDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEGVDVP 557
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EGLA DWIG YW D + I D NG ++ K+NI+QPRG+ + P + LFWT
Sbjct: 558 EGLAVDWIGRRFYWTDRGKSLIGRSDLNGKRSKIITKENISQPRGIAVHPM--AKRLFWT 615
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
D G NPRIE + G R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 616 DTGINPRIESSSLQGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLD 672
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 171/428 (39%), Gaps = 89/428 (20%)
Query: 33 CKHKFGLCSNT-CHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGS 90
CK + G CS+T C LC C G LS D C+D+NEC + C+ C NT GS
Sbjct: 318 CKLRKGNCSSTVCGQDLQSHLCMCAEGYALSRDRKYCEDVNECAFWNHGCTLGCKNTPGS 377
Query: 91 YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD-----------LEEKGK--- 136
Y C+C G+VL D C + + + +L ++ LE GK
Sbjct: 378 YYCTCPVGFVLLPDGKRCHQLVSCPRNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTCS 437
Query: 137 -----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN- 190
D+ + L V D G+ LD + C +G +L ++
Sbjct: 438 GCSSPDNGGCSQLCVPLSPVS-WECDCFPGYDLQLDEK-----SCAASGPQPFLLFANSQ 491
Query: 191 ---------------ITQPRGMM--LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
++Q GM+ LD P +++ IER MDGS R +I
Sbjct: 492 DIRHMHFDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALK-WIERANMDGSQRERLI 550
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
+ P GL +D I R+ YW D G +
Sbjct: 551 EEGVDVPEGLAVDW------------------------------IGRRFYWTDRGKS--- 577
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
IG+++++G + I+ + + + + + LFWTD G NPRIE
Sbjct: 578 -LIGRSDLNGKRSKIITKENISQPRGIAVH---------PMAKRLFWTDTGINPRIESSS 627
Query: 354 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
+ G R I S+ + WP+G+T+D T ++Y+ D+K I+ N DG+ R+++ D+
Sbjct: 628 LQGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLDGSKRRRLTQNDVGHP 687
Query: 414 FTNDLMGD 421
F + D
Sbjct: 688 FAVAVFED 695
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 37/258 (14%)
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEG 153
SC EG + N TC A FLI S+ +SI D E G ++ Q +V +G+ ++
Sbjct: 27 SCPEGTLAGNGNSTCVG---PAPFLIFSHGNSIFRIDTE--GTNYE-QLVVDAGVSVIMD 80
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRWL--- 208
Y+ IYW+D ++ NG+ R+ + N++ GM ++ W+
Sbjct: 81 FHYN--EKRIYWVDLERQLLQRVFLNGSRQERVCNIEKNVS---GMAIN------WINEE 129
Query: 209 -FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKL 259
W++ E I M G+N S I+ + + +P + +D R ++++ + L
Sbjct: 130 VIWSNQQEG-IITVTDMKGNN-SHILLSALKYPANVAVDPVERFIFWSSEVAGSLYRADL 187
Query: 260 DFIDCKSL----EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D + K+L E T V+ + ++L+WI G I + DG + I +
Sbjct: 188 DGVGVKALLETSEKITAVSLDVLDKRLFWIQYNREGSNSLICSCDYDGGSVHISKHPTQH 247
Query: 316 EALALDLENGMLYYSTLK 333
A+ L ++YST K
Sbjct: 248 NLFAMSLFGDRIFYSTWK 265
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 10/55 (18%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNECEQ------PGYCSQMCTNTKGSYICSCNEGY 99
A C C G + D C D++ECE P S C NT+G Y+C C+EGY
Sbjct: 853 ATCQCLKG--FAGDGKLCSDIDECEMGVPVCPPA--SSKCINTEGGYVCRCSEGY 903
>gi|166362728|ref|NP_001954.2| pro-epidermal growth factor isoform 1 preproprotein [Homo sapiens]
gi|251757262|sp|P01133.2|EGF_HUMAN RecName: Full=Pro-epidermal growth factor; Short=EGF; Contains:
RecName: Full=Epidermal growth factor; AltName:
Full=Urogastrone; Flags: Precursor
gi|119626662|gb|EAX06257.1| epidermal growth factor (beta-urogastrone) [Homo sapiens]
Length = 1207
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 137/297 (46%), Gaps = 52/297 (17%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C L C CS+ C T G LC CP G +L D TC +
Sbjct: 382 CPVGFVLLPDGKRCHQLVSCPRNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SG 438
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---- 126
C P G CSQ+C + S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 439 CSSPDNGGCSQLCVPLSPVSWECDCFPGYDLQLDEKSCAA-SGPQPFLLFANSQDIRHMH 497
Query: 127 ---------------LVADLEEKGKDHR--------------------AQDIVVSGLDLV 151
+V L+ +++ + ++ G+D+
Sbjct: 498 FDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEGVDVP 557
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EGLA DWIG YW D + I D NG ++ K+NI+QPRG+ + P + LFWT
Sbjct: 558 EGLAVDWIGRRFYWTDRGKSLIGRSDLNGKRSKIITKENISQPRGIAVHPM--AKRLFWT 615
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
D G NPRIE + G R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 616 DTGINPRIESSSLQGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLD 672
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 171/428 (39%), Gaps = 89/428 (20%)
Query: 33 CKHKFGLCSNT-CHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGS 90
CK + G CS+T C LC C G LS D C+D+NEC + C+ C NT GS
Sbjct: 318 CKLRKGNCSSTVCGQDLQSHLCMCAEGYALSRDRKYCEDVNECAFWNHGCTLGCKNTPGS 377
Query: 91 YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD-----------LEEKGK--- 136
Y C+C G+VL D C + + + +L ++ LE GK
Sbjct: 378 YYCTCPVGFVLLPDGKRCHQLVSCPRNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTCS 437
Query: 137 -----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN- 190
D+ + L V D G+ LD + C +G +L ++
Sbjct: 438 GCSSPDNGGCSQLCVPLSPVS-WECDCFPGYDLQLDEK-----SCAASGPQPFLLFANSQ 491
Query: 191 ---------------ITQPRGMM--LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
++Q GM+ LD P +++ IER MDGS R +I
Sbjct: 492 DIRHMHFDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALK-WIERANMDGSQRERLI 550
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
+ P GL +D I R+ YW D G +
Sbjct: 551 EEGVDVPEGLAVDW------------------------------IGRRFYWTDRGKS--- 577
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
IG+++++G + I+ + + + + + LFWTD G NPRIE
Sbjct: 578 -LIGRSDLNGKRSKIITKENISQPRGIAVH---------PMAKRLFWTDTGINPRIESSS 627
Query: 354 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
+ G R I S+ + WP+G+T+D T ++Y+ D+K I+ N DG+ R+++ D+
Sbjct: 628 LQGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLDGSKRRRLTQNDVGHP 687
Query: 414 FTNDLMGD 421
F + D
Sbjct: 688 FAVAVFED 695
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 37/258 (14%)
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEG 153
SC EG + N TC A FLI S+ +SI D E G ++ Q +V +G+ ++
Sbjct: 27 SCPEGTLAGNGNSTCVG---PAPFLIFSHGNSIFRIDTE--GTNYE-QLVVDAGVSVIMD 80
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRWL--- 208
Y+ IYW+D ++ NG+ R+ + N++ GM ++ W+
Sbjct: 81 FHYN--EKRIYWVDLERQLLQRVFLNGSRQERVCNIEKNVS---GMAIN------WINEE 129
Query: 209 -FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKL 259
W++ E I M G+N S I+ + + +P + +D R ++++ + L
Sbjct: 130 VIWSNQQEG-IITVTDMKGNN-SHILLSALKYPANVAVDPVERFIFWSSEVAGSLYRADL 187
Query: 260 DFIDCKSL----EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D + K+L E T V+ + ++L+WI G I + DG + I +
Sbjct: 188 DGVGVKALLETSEKITAVSLDVLDKRLFWIQYNREGSNSLICSCDYDGGSVHISKHPTQH 247
Query: 316 EALALDLENGMLYYSTLK 333
A+ L ++YST K
Sbjct: 248 NLFAMSLFGDRIFYSTWK 265
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 10/55 (18%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNECEQ------PGYCSQMCTNTKGSYICSCNEGY 99
A C C G + D C D++ECE P S C NT+G Y+C C+EGY
Sbjct: 853 ATCQCLKG--FAGDGKLCSDIDECEMGVPVCPPA--SSKCINTEGGYVCRCSEGY 903
>gi|397519856|ref|XP_003830069.1| PREDICTED: pro-epidermal growth factor isoform 1 [Pan paniscus]
Length = 1207
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 138/297 (46%), Gaps = 52/297 (17%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C L C CS+ C T G LC CP G +L D TC +
Sbjct: 382 CPVGFVLLPDGKRCHQLVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SG 438
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---- 126
C P G CSQ+C + S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 439 CSSPDNGGCSQLCIPLSPVSWECDCFPGYDLQLDKKSCAA-SGPQPFLLFANSQDIRHMH 497
Query: 127 ---------------LVADLEEKGKDHR--------------------AQDIVVSGLDLV 151
+V L+ +++ + ++ G+D+
Sbjct: 498 FDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEGVDVP 557
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EGLA DWIG YW D + I D NG ++AK+N++QPRG+ + P + LFWT
Sbjct: 558 EGLAVDWIGRRFYWTDRGKSLIGRSDLNGKRSKIIAKENLSQPRGIAIHPM--AKRLFWT 615
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
D G NPRIE + G R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 616 DTGINPRIESSSLQGLGRLIIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLD 672
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 172/427 (40%), Gaps = 89/427 (20%)
Query: 34 KHKFGLCSNT-CHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGSY 91
K + G CS+T C LCTC G LS D C+D+NEC + C+ C NT GSY
Sbjct: 319 KLRKGNCSSTVCGQDLQSHLCTCAEGYALSRDRKYCEDVNECAFWNHGCTLGCKNTPGSY 378
Query: 92 ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD-----------LEEKGK---- 136
C+C G+VL D C + + + + +L ++ LE GK
Sbjct: 379 YCTCPVGFVLLPDGKRCHQLVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTCSG 438
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN-- 190
D+ + L V D G+ LD + C +G +L ++
Sbjct: 439 CSSPDNGGCSQLCIPLSPVS-WECDCFPGYDLQLDKK-----SCAASGPQPFLLFANSQD 492
Query: 191 --------------ITQPRGMM--LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
++Q GM+ LD P +++ IER MDGS R +I
Sbjct: 493 IRHMHFDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALK-WIERANMDGSQRERLIE 551
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
+ P GL +D I R+ YW D G +
Sbjct: 552 EGVDVPEGLAVDW------------------------------IGRRFYWTDRGKS---- 577
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
IG+++++G + I+ L + + + + LFWTD G NPRIE +
Sbjct: 578 LIGRSDLNGKRSKIIAKENLSQPRGIAIH---------PMAKRLFWTDTGINPRIESSSL 628
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
G R I S+ + WP+G+T+D T ++Y+ D+K I+ N DG+ R+++ D+ F
Sbjct: 629 QGLGRLIIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLDGSKRRRLTQNDVGHPF 688
Query: 415 TNDLMGD 421
+ D
Sbjct: 689 AVAVFED 695
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 37/258 (14%)
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEG 153
SC EG + N TC A FLI S+ +SI D E G ++ Q +V +G+ ++
Sbjct: 27 SCPEGTLAGNGNSTCVG---PAPFLIFSHGNSIFRIDTE--GTNYE-QLVVDAGVSVIMD 80
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRWL--- 208
Y+ IYW+D ++ NG+ R+ + N++ GM ++ W+
Sbjct: 81 FHYN--EKRIYWVDLERQLLQRVFLNGSRQERVCNIEKNVS---GMAIN------WINEE 129
Query: 209 -FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKL 259
W++ E I M G+N S I+ + + +P + +D R ++++ + L
Sbjct: 130 VIWSNQQEG-IITVTDMKGNN-SHILLSALKYPANVAVDPVERFIFWSSEVAGSLYRADL 187
Query: 260 DFIDCKSL----EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D + K+L E T V+ + ++L+WI G I + DG + I +
Sbjct: 188 DGVGVKALLETSEKITAVSLDVLDKRLFWIQYNREGSNSLICSCDYDGGSVHISKHPTQH 247
Query: 316 EALALDLENGMLYYSTLK 333
A+ L ++YST K
Sbjct: 248 NLFAMSLFGDRIFYSTWK 265
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 10/55 (18%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNECEQ------PGYCSQMCTNTKGSYICSCNEGY 99
A C C G + D C D++ECE P S C NT+G Y+C C+EGY
Sbjct: 853 ATCQCLKG--FAGDGKLCSDIDECEMGVPVCPPA--SSKCINTEGGYVCRCSEGY 903
>gi|296011015|ref|NP_001171602.1| pro-epidermal growth factor isoform 3 preproprotein [Homo sapiens]
Length = 1165
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 137/297 (46%), Gaps = 52/297 (17%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C L C CS+ C T G LC CP G +L D TC +
Sbjct: 340 CPVGFVLLPDGKRCHQLVSCPRNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SG 396
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---- 126
C P G CSQ+C + S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 397 CSSPDNGGCSQLCVPLSPVSWECDCFPGYDLQLDEKSCAA-SGPQPFLLFANSQDIRHMH 455
Query: 127 ---------------LVADLEEKGKDHR--------------------AQDIVVSGLDLV 151
+V L+ +++ + ++ G+D+
Sbjct: 456 FDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEGVDVP 515
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EGLA DWIG YW D + I D NG ++ K+NI+QPRG+ + P + LFWT
Sbjct: 516 EGLAVDWIGRRFYWTDRGKSLIGRSDLNGKRSKIITKENISQPRGIAVHPM--AKRLFWT 573
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
D G NPRIE + G R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 574 DTGINPRIESSSLQGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLD 630
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 37/258 (14%)
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEG 153
SC EG + N TC A FLI S+ +SI D E G ++ Q +V +G+ ++
Sbjct: 27 SCPEGTLAGNGNSTCVG---PAPFLIFSHGNSIFRIDTE--GTNYE-QLVVDAGVSVIMD 80
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRWL--- 208
Y+ IYW+D ++ NG+ R+ + N++ GM ++ W+
Sbjct: 81 FHYN--EKRIYWVDLERQLLQRVFLNGSRQERVCNIEKNVS---GMAIN------WINEE 129
Query: 209 -FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKL 259
W++ E I M G+N S I+ + + +P + +D R ++++ + L
Sbjct: 130 VIWSNQQEG-IITVTDMKGNN-SHILLSALKYPANVAVDPVERFIFWSSEVAGSLYRADL 187
Query: 260 DFIDCKSL----EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D + K+L E T V+ + ++L+WI G I + DG + I +
Sbjct: 188 DGVGVKALLETSEKITAVSLDVLDKRLFWIQYNREGSNSLICSCDYDGGSVHISKHPTQH 247
Query: 316 EALALDLENGMLYYSTLK 333
A+ L ++YST K
Sbjct: 248 NLFAMSLFGDRIFYSTWK 265
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 10/55 (18%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNECEQ------PGYCSQMCTNTKGSYICSCNEGY 99
A C C G + D C D++ECE P S C NT+G Y+C C+EGY
Sbjct: 811 ATCQCLKG--FAGDGKLCSDIDECEMGVPVCPPA--SSKCINTEGGYVCRCSEGY 861
>gi|109075340|ref|XP_001088957.1| PREDICTED: pro-epidermal growth factor isoform 1 [Macaca mulatta]
Length = 1208
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 132/281 (46%), Gaps = 48/281 (17%)
Query: 30 LAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQP--GYCSQMCTN- 86
L C CS+ C T G LC CP G +L D TC + C P G CSQ+C
Sbjct: 398 LVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SGCSSPDNGGCSQLCIPL 454
Query: 87 TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI-------------------L 127
+ S+ C C GY L+ D +C A + FL+ +N I +
Sbjct: 455 SPVSWECDCFPGYDLQLDKKSCVA-SGPQPFLLFANSQDIRHMHFDGTDYGTLLSQQMGM 513
Query: 128 VADLEEKGKDHR--------------------AQDIVVSGLDLVEGLAYDWIGGHIYWLD 167
V L+ +++ + ++ G+D+ EGLA DWIG YW D
Sbjct: 514 VYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEGVDVPEGLAVDWIGRRFYWTD 573
Query: 168 SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227
+ I D NG + ++ K+NI+QPRG+ + P + LFWTD G NPRIE + G
Sbjct: 574 RGKSLIGRSDLNGKHPKIIIKENISQPRGIAVHPM--AKRLFWTDTGINPRIESSSLQGL 631
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
R I S+ + WPNG+T+D T ++Y+ D+K I+ +L+
Sbjct: 632 GRLVIASSDLIWPNGITIDFLTDKLYWCDAKQSVIEMANLD 672
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 113/442 (25%), Positives = 177/442 (40%), Gaps = 89/442 (20%)
Query: 19 PNGADEGPGCDLAECKHKFGLCSNT-CHPTPLGALCTCPPGEILSNDSVTCQDMNECEQP 77
P D+ C+ K + G CS+T C LCTC G LS D C+D+NEC
Sbjct: 304 PKAEDDARECEQKLHKLRKGNCSSTVCGQDAQSHLCTCAEGYALSRDRKYCEDVNECAFW 363
Query: 78 GY-CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD------ 130
+ C+ C NT GSY C+C G+VL D C + + + + +L ++
Sbjct: 364 NHGCTLGCKNTPGSYYCTCPVGFVLLPDGKRCHQLVSCPSNVSECSHDCVLTSEGPLCFC 423
Query: 131 -----LEEKGK--------DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
LE GK D+ + L V D G+ LD + C
Sbjct: 424 PEGSVLERDGKTCSGCSSPDNGGCSQLCIPLSPVS-WECDCFPGYDLQLDKK-----SCV 477
Query: 178 ENGTNRIVLAKDN----------------ITQPRGMM--LDPSPGTRWLFWTDWGENPRI 219
+G +L ++ ++Q GM+ LD P +++ I
Sbjct: 478 ASGPQPFLLFANSQDIRHMHFDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALK-WI 536
Query: 220 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIF 279
ER MDGS R +I + P GL +D I
Sbjct: 537 ERANMDGSQRERLIEEGVDVPEGLAVDW------------------------------IG 566
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLF 339
R+ YW D G + IG+++++G + I++ + + + + + LF
Sbjct: 567 RRFYWTDRGKS----LIGRSDLNGKHPKIIIKENISQPRGIAVH---------PMAKRLF 613
Query: 340 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
WTD G NPRIE + G R I S+ + WPNG+T+D T ++Y+ D+K I+ N DG
Sbjct: 614 WTDTGINPRIESSSLQGLGRLVIASSDLIWPNGITIDFLTDKLYWCDAKQSVIEMANLDG 673
Query: 400 TGRQQVILIDLMVEFTNDLMGD 421
+ R+ + D+ F + D
Sbjct: 674 SKRRTLTQNDVGHPFAIAVFED 695
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 72/187 (38%), Gaps = 43/187 (22%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
V G+A +WI + W + + I V D G N VL + P + +DP R++FW
Sbjct: 118 VSGMAINWINEEVIWSNQQEGIITVTDMKGNNSHVLLS-ALKYPANIAVDPV--ERFIFW 174
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL--- 267
+ ++A +Y AD LD ++ KSL
Sbjct: 175 SS---------------------------------EVAG-SLYRAD--LDGVEVKSLLET 198
Query: 268 -EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGM 326
E T V+ + ++L+WI G I + DG + + + A+ L
Sbjct: 199 SEKITAVSLDVLDKRLFWIQYSREGSNSLICSCDYDGGSVHVSKHPTQHNLFAMSLFGDH 258
Query: 327 LYYSTLK 333
++YST K
Sbjct: 259 VFYSTWK 265
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 10/53 (18%)
Query: 53 CTCPPGEILSNDSVTCQDMNECEQ------PGYCSQMCTNTKGSYICSCNEGY 99
C C G + D + C D++ECE P S C NT+G Y+C C+EGY
Sbjct: 855 CQCLKG--FAGDGILCSDIDECEMGVPVCPPA--SSKCINTEGGYVCQCSEGY 903
>gi|355749504|gb|EHH53903.1| hypothetical protein EGM_14614 [Macaca fascicularis]
Length = 1207
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 132/281 (46%), Gaps = 48/281 (17%)
Query: 30 LAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQP--GYCSQMCTN- 86
L C CS+ C T G LC CP G +L D TC + C P G CSQ+C
Sbjct: 398 LVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SGCSSPDNGGCSQLCIPL 454
Query: 87 TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI-------------------L 127
+ S+ C C GY L+ D +C A + FL+ +N I +
Sbjct: 455 SPVSWECDCFPGYDLQLDKKSCVA-SGPQPFLLFANSQDIRHMHFDGTDYGTLLSQQMGM 513
Query: 128 VADLEEKGKDHR--------------------AQDIVVSGLDLVEGLAYDWIGGHIYWLD 167
V L+ +++ + ++ G+D+ EGLA DWIG YW D
Sbjct: 514 VYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEGVDVPEGLAVDWIGRRFYWTD 573
Query: 168 SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227
+ I D NG + ++ K+NI+QPRG+ + P + LFWTD G NPRIE + G
Sbjct: 574 RGKSLIGRSDLNGKHPKIIIKENISQPRGIAVHPM--AKRLFWTDTGINPRIESSSLQGL 631
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
R I S+ + WPNG+T+D T ++Y+ D+K I+ +L+
Sbjct: 632 GRLVIASSDLIWPNGITIDFLTDKLYWCDAKQSVIEMANLD 672
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 172/427 (40%), Gaps = 89/427 (20%)
Query: 34 KHKFGLCSNT-CHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGSY 91
K + G CS+T C LCTC G LS D C+D+NEC + C+ C NT GSY
Sbjct: 319 KSRKGNCSSTVCGQDAQSHLCTCAEGYALSRDRKYCEDVNECAFWNHGCTLGCKNTPGSY 378
Query: 92 ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD-----------LEEKGK---- 136
C+C G+VL D C + + + + +L ++ LE GK
Sbjct: 379 YCTCPVGFVLLPDGKRCHQLVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTCSG 438
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN-- 190
D+ + L V D G+ LD + C +G +L ++
Sbjct: 439 CSSPDNGGCSQLCIPLSPVS-WECDCFPGYDLQLDKK-----SCVASGPQPFLLFANSQD 492
Query: 191 --------------ITQPRGMM--LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
++Q GM+ LD P +++ IER MDGS R +I
Sbjct: 493 IRHMHFDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALK-WIERANMDGSQRERLIE 551
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
+ P GL +D I R+ YW D G +
Sbjct: 552 EGVDVPEGLAVDW------------------------------IGRRFYWTDRGKS---- 577
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
IG+++++G + I++ + + + + + LFWTD G NPRIE +
Sbjct: 578 LIGRSDLNGKHPKIIIKENISQPRGIAVH---------PMAKRLFWTDTGINPRIESSSL 628
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
G R I S+ + WPNG+T+D T ++Y+ D+K I+ N DG+ R+ + D+ F
Sbjct: 629 QGLGRLVIASSDLIWPNGITIDFLTDKLYWCDAKQSVIEMANLDGSKRRTLTQNDVGHPF 688
Query: 415 TNDLMGD 421
+ D
Sbjct: 689 AIAVFED 695
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 72/187 (38%), Gaps = 43/187 (22%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
V G+A +WI + W + + I V D G N VL + P + +DP R++FW
Sbjct: 118 VSGMAINWINEEVIWSNQQEGIITVTDMKGNNSHVLLS-ALKYPANIAVDPV--ERFIFW 174
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL--- 267
+ ++A +Y AD LD ++ KSL
Sbjct: 175 SS---------------------------------EVAG-SLYRAD--LDGVEVKSLLET 198
Query: 268 -EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGM 326
E T V+ + ++L+WI G I + DG + + + A+ L
Sbjct: 199 SEKITAVSLDVLDKRLFWIQYSREGSNSLICSCDYDGGSVHVSKHPTQHNLFAMSLFGDH 258
Query: 327 LYYSTLK 333
++YST K
Sbjct: 259 VFYSTWK 265
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 10/53 (18%)
Query: 53 CTCPPGEILSNDSVTCQDMNECEQ------PGYCSQMCTNTKGSYICSCNEGY 99
C C G + D + C D++ECE P S C NT+G Y+C C+EGY
Sbjct: 855 CQCLKG--FAGDGILCSDIDECEMGVPVCPPA--SSKCINTEGGYVCQCSEGY 903
>gi|332820093|ref|XP_003310495.1| PREDICTED: pro-epidermal growth factor isoform 2 [Pan troglodytes]
Length = 1166
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 137/297 (46%), Gaps = 52/297 (17%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C L C CS+ C T G LC CP G +L D TC +
Sbjct: 382 CPVGFVLLPDGKRCHQLVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SG 438
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---- 126
C P G CSQ+C + S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 439 CSSPDNGGCSQLCIPLSPVSWECDCFPGYDLQLDKKSCAA-SGPQPFLLFANSQDIRHMH 497
Query: 127 ---------------LVADLEEKGKDHR--------------------AQDIVVSGLDLV 151
+V L+ +++ + ++ G+D+
Sbjct: 498 FDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEGVDVP 557
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EGLA DWIG YW D + I D NG ++ K+NI+QPRG+ + P + LFWT
Sbjct: 558 EGLAVDWIGRRFYWTDRGKSLIGRSDLNGKRSKIITKENISQPRGIAVHPM--AKRLFWT 615
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
D G NPRIE + G R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 616 DTGINPRIESSSLQGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLD 672
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 172/427 (40%), Gaps = 89/427 (20%)
Query: 34 KHKFGLCSNT-CHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGSY 91
K + G CS+T C LCTC G LS D C+D+NEC + C+ C NT GSY
Sbjct: 319 KLRKGNCSSTVCGQDLQSHLCTCAEGYALSRDRKYCEDVNECAFWNHGCTLGCKNTPGSY 378
Query: 92 ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD-----------LEEKGK---- 136
C+C G+VL D C + + + + +L ++ LE GK
Sbjct: 379 YCTCPVGFVLLPDGKRCHQLVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTCSG 438
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN-- 190
D+ + L V D G+ LD + C +G +L ++
Sbjct: 439 CSSPDNGGCSQLCIPLSPVS-WECDCFPGYDLQLDKK-----SCAASGPQPFLLFANSQD 492
Query: 191 --------------ITQPRGMM--LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
++Q GM+ LD P +++ IER MDGS R +I
Sbjct: 493 IRHMHFDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALK-WIERANMDGSQRERLIE 551
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
+ P GL +D I R+ YW D G +
Sbjct: 552 EGVDVPEGLAVDW------------------------------IGRRFYWTDRGKS---- 577
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
IG+++++G + I+ + + + + + LFWTD G NPRIE +
Sbjct: 578 LIGRSDLNGKRSKIITKENISQPRGIAVH---------PMAKRLFWTDTGINPRIESSSL 628
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
G R I S+ + WP+G+T+D T ++Y+ D+K I+ N DG+ R+++ D+ F
Sbjct: 629 QGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLDGSKRRRLTQNDVGHPF 688
Query: 415 TNDLMGD 421
+ D
Sbjct: 689 AVAVFED 695
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 111/258 (43%), Gaps = 37/258 (14%)
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEG 153
SC EG + N TC A FLI S+ +SI D E G ++ Q +V +G+ ++
Sbjct: 27 SCPEGTLAGNGNSTCVG---PAPFLIFSHGNSIFRIDTE--GTNYE-QLVVDAGVSVIMD 80
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRWL--- 208
Y+ IYW+D ++ NG+ R+ + N++ GM ++ W+
Sbjct: 81 FHYN--EKRIYWVDLERQLLQRVFLNGSRQERVCNIEKNVS---GMAIN------WINEE 129
Query: 209 -FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKL 259
W++ E I M G+N ++S + +P + +D R ++++ + L
Sbjct: 130 VIWSNQQEG-IITVTDMKGNNSHVLLSA-LKYPANIAVDPVERFIFWSSEVAGSLYRADL 187
Query: 260 DFIDCKSL----EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D + K+L E T V+ + ++L+WI G I + DG + I +
Sbjct: 188 DGVGVKALLETSEKITAVSLDVLDKRLFWIQYNREGSNSLICSCDYDGGSVHISKHPTQH 247
Query: 316 EALALDLENGMLYYSTLK 333
A+ L ++YS K
Sbjct: 248 NLFAMSLFGDRIFYSIWK 265
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 10/55 (18%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNECEQ------PGYCSQMCTNTKGSYICSCNEGY 99
A C C G + D C D++ECE P S C NT+G Y+C C+EGY
Sbjct: 853 ATCQCLKG--FAGDGKLCSDIDECEMGVPVCPPA--SSKCINTEGGYVCRCSEGY 903
>gi|332820091|ref|XP_003310494.1| PREDICTED: pro-epidermal growth factor isoform 1 [Pan troglodytes]
Length = 1165
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 137/297 (46%), Gaps = 52/297 (17%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C L C CS+ C T G LC CP G +L D TC +
Sbjct: 340 CPVGFVLLPDGKRCHQLVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SG 396
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---- 126
C P G CSQ+C + S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 397 CSSPDNGGCSQLCIPLSPVSWECDCFPGYDLQLDKKSCAA-SGPQPFLLFANSQDIRHMH 455
Query: 127 ---------------LVADLEEKGKDHR--------------------AQDIVVSGLDLV 151
+V L+ +++ + ++ G+D+
Sbjct: 456 FDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEGVDVP 515
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EGLA DWIG YW D + I D NG ++ K+NI+QPRG+ + P + LFWT
Sbjct: 516 EGLAVDWIGRRFYWTDRGKSLIGRSDLNGKRSKIITKENISQPRGIAVHPM--AKRLFWT 573
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
D G NPRIE + G R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 574 DTGINPRIESSSLQGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLD 630
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 111/258 (43%), Gaps = 37/258 (14%)
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEG 153
SC EG + N TC A FLI S+ +SI D E G ++ Q +V +G+ ++
Sbjct: 27 SCPEGTLAGNGNSTCVG---PAPFLIFSHGNSIFRIDTE--GTNYE-QLVVDAGVSVIMD 80
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRWL--- 208
Y+ IYW+D ++ NG+ R+ + N++ GM ++ W+
Sbjct: 81 FHYN--EKRIYWVDLERQLLQRVFLNGSRQERVCNIEKNVS---GMAIN------WINEE 129
Query: 209 -FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKL 259
W++ E I M G+N ++S + +P + +D R ++++ + L
Sbjct: 130 VIWSNQQEG-IITVTDMKGNNSHVLLSA-LKYPANIAVDPVERFIFWSSEVAGSLYRADL 187
Query: 260 DFIDCKSL----EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D + K+L E T V+ + ++L+WI G I + DG + I +
Sbjct: 188 DGVGVKALLETSEKITAVSLDVLDKRLFWIQYNREGSNSLICSCDYDGGSVHISKHPTQH 247
Query: 316 EALALDLENGMLYYSTLK 333
A+ L ++YS K
Sbjct: 248 NLFAMSLFGDRIFYSIWK 265
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 10/55 (18%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNECEQ------PGYCSQMCTNTKGSYICSCNEGY 99
A C C G + D C D++ECE P S C NT+G Y+C C+EGY
Sbjct: 811 ATCQCLKG--FAGDGKLCSDIDECEMGVPVCPPA--SSKCINTEGGYVCRCSEGY 861
>gi|296237378|ref|XP_002763723.1| PREDICTED: low-density lipoprotein receptor-related protein 4,
partial [Callithrix jacchus]
Length = 737
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 31/274 (11%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 476 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 535
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ + N L+YD+ K + ++ FL + R + +++E
Sbjct: 536 SDNTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 585
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL ++ +PR + + P
Sbjct: 586 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINHSLDEPRAIAVFPR 645
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD I
Sbjct: 646 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRI 703
Query: 263 DCKSLEIK------TNVNYSTIF----RKLYWID 286
+ L K ++V++ R +YW D
Sbjct: 704 ESADLNGKLRQVLVSHVSHPFALTQQDRWIYWTD 737
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 129/248 (52%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTCHPTP--LGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C +P G CTCP G L +D TC PG S + +
Sbjct: 170 CAMENGGCSHLCLRSPNLSGFSCTCPTGINLLSDGKTCS-------PGMNSFLIFARRID 222
Query: 90 SYICSCNEGY---VLEYDNHTCK---AI----NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K AI + S H I A L+ G H
Sbjct: 223 IRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHRISCASLD--GSQH- 279
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 280 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 338
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D A ++ +AD+
Sbjct: 339 YHEMG--FMYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGLTVDKANSQLLWADAHT 396
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 397 ERIEAADL 404
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR--RVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 509 GKTCDPSPETYLLF----SSRGSIRRISLDTSDNTDVHVPVPELNNVISLDYDSVDGKVY 564
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 565 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 620
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 621 LDGSCRKVLINHSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 671
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 672 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 717
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 95/178 (53%), Gaps = 26/178 (14%)
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLE-------IKTNVNYS------TIFRKLYWIDEG 288
+ +D +VY++DS L I C SL+ I T + + I RK+YW D G
Sbjct: 249 AIGVDPQEGKVYWSDSTLHRISCASLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTG 308
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
N +I N+DGS +LV L A+ L + M + ++WTDWGEN +
Sbjct: 309 TN----RIEVGNLDGSMRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAK 355
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ER GMDGS+R+ +I+ + WPNGLT+D A ++ +AD+ + I+ + +G R ++
Sbjct: 356 LERSGMDGSDRTVLINNNLGWPNGLTVDKANSQLLWADAHTERIEAADLNGANRHTLV 413
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 93/192 (48%), Gaps = 47/192 (24%)
Query: 171 NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS 230
+RIEV + +G+ R VL +N+ +PR ++++P G +++WTDWG +P+IER GMD S R
Sbjct: 2 DRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGG--YMYWTDWGASPKIERAGMDASGRQ 59
Query: 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN 290
IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 60 VIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF--------------------- 93
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
A +DGS +L+ QL L L +Y WTDW
Sbjct: 94 --------AGLDGSKRKVLIGSQLPHPFGLTLYGERIY-----------WTDWQTKSIQS 134
Query: 351 RIGMDGSNRSTI 362
+ G +R T+
Sbjct: 135 ADRLTGLDRETL 146
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 71/127 (55%), Gaps = 9/127 (7%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I AN DGS ++L+ L + +E Y ++WTDWG +P+IER GM
Sbjct: 3 RIEVANTDGSMRTVLIWENLDRPRDIVVEPMGGY---------MYWTDWGASPKIERAGM 53
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
D S R IIS+ + WPNGL +D ++R+Y+AD+ + I+F DG+ R+ +I L F
Sbjct: 54 DASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQLPHPF 113
Query: 415 TNDLMGD 421
L G+
Sbjct: 114 GLTLYGE 120
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLD-SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ LD + + +GG++YW D +IE + + R V+ N+T P G+ +D
Sbjct: 17 LIWENLDRPRDIVVEPMGGYMYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDY 76
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G++ L+W D G IE G+DGS R +I +++ P GLTL R+Y+ D
Sbjct: 77 --GSQRLYWADAGMKT-IEFAGLDGSKRKVLIGSQLPHPFGLTL--YGERIYWTD 126
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 118/304 (38%), Gaps = 53/304 (17%)
Query: 129 ADLEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
A LE G D + ++++ L GL D + W D+ RIE D NG NR L
Sbjct: 354 AKLERSGMDGSDRTVLINNNLGWPNGLTVDKANSQLLWADAHTERIEAADLNGANRHTLV 413
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
+ P G+ L S +++WTDW + I R D S +I + P + +
Sbjct: 414 SP-VQHPYGLTLLDS----YIYWTDW-QTRSIHR--ADKGTGSNVILVRSNLPGLMDIQA 465
Query: 248 ATRRVYFADSKLDFIDCKS-----------------------LEIKTNVNYSTIFRKLYW 284
R L F C S +++K + + Y
Sbjct: 466 VDR-----TQPLGFNKCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYL 520
Query: 285 IDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTD 342
+ G +I D ++ + V +L ++LD + +G +YY+ +
Sbjct: 521 L-FSSRGSIRRISLDTSDNTDVHVPVP-ELNNVISLDYDSVDGKVYYTDVFLD------- 571
Query: 343 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
I R ++GSN T+I + +GL +D R +Y+ D+ + I+ DG+ R
Sbjct: 572 -----VIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCR 626
Query: 403 QQVI 406
+ +I
Sbjct: 627 KVLI 630
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 131 LEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + +++S L GLA D+ +YW D+ + IE +G+ R VL
Sbjct: 48 IERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGS 107
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI 232
+ P G+ L G R ++WTDW + G +R T+
Sbjct: 108 QLPHPFGLTL---YGER-IYWTDWQTKSIQSADRLTGLDRETL 146
>gi|114595659|ref|XP_517395.2| PREDICTED: pro-epidermal growth factor isoform 3 [Pan troglodytes]
Length = 1207
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 137/297 (46%), Gaps = 52/297 (17%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C L C CS+ C T G LC CP G +L D TC +
Sbjct: 382 CPVGFVLLPDGKRCHQLVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SG 438
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---- 126
C P G CSQ+C + S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 439 CSSPDNGGCSQLCIPLSPVSWECDCFPGYDLQLDKKSCAA-SGPQPFLLFANSQDIRHMH 497
Query: 127 ---------------LVADLEEKGKDHR--------------------AQDIVVSGLDLV 151
+V L+ +++ + ++ G+D+
Sbjct: 498 FDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEGVDVP 557
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EGLA DWIG YW D + I D NG ++ K+NI+QPRG+ + P + LFWT
Sbjct: 558 EGLAVDWIGRRFYWTDRGKSLIGRSDLNGKRSKIITKENISQPRGIAVHPM--AKRLFWT 615
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
D G NPRIE + G R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 616 DTGINPRIESSSLQGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLD 672
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 172/427 (40%), Gaps = 89/427 (20%)
Query: 34 KHKFGLCSNT-CHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGSY 91
K + G CS+T C LCTC G LS D C+D+NEC + C+ C NT GSY
Sbjct: 319 KLRKGNCSSTVCGQDLQSHLCTCAEGYALSRDRKYCEDVNECAFWNHGCTLGCKNTPGSY 378
Query: 92 ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD-----------LEEKGK---- 136
C+C G+VL D C + + + + +L ++ LE GK
Sbjct: 379 YCTCPVGFVLLPDGKRCHQLVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTCSG 438
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN-- 190
D+ + L V D G+ LD + C +G +L ++
Sbjct: 439 CSSPDNGGCSQLCIPLSPVS-WECDCFPGYDLQLDKK-----SCAASGPQPFLLFANSQD 492
Query: 191 --------------ITQPRGMM--LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
++Q GM+ LD P +++ IER MDGS R +I
Sbjct: 493 IRHMHFDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALK-WIERANMDGSQRERLIE 551
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
+ P GL +D I R+ YW D G +
Sbjct: 552 EGVDVPEGLAVDW------------------------------IGRRFYWTDRGKS---- 577
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
IG+++++G + I+ + + + + + LFWTD G NPRIE +
Sbjct: 578 LIGRSDLNGKRSKIITKENISQPRGIAVH---------PMAKRLFWTDTGINPRIESSSL 628
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
G R I S+ + WP+G+T+D T ++Y+ D+K I+ N DG+ R+++ D+ F
Sbjct: 629 QGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLDGSKRRRLTQNDVGHPF 688
Query: 415 TNDLMGD 421
+ D
Sbjct: 689 AVAVFED 695
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 111/258 (43%), Gaps = 37/258 (14%)
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEG 153
SC EG + N TC A FLI S+ +SI D E G ++ Q +V +G+ ++
Sbjct: 27 SCPEGTLAGNGNSTCVG---PAPFLIFSHGNSIFRIDTE--GTNYE-QLVVDAGVSVIMD 80
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRWL--- 208
Y+ IYW+D ++ NG+ R+ + N++ GM ++ W+
Sbjct: 81 FHYN--EKRIYWVDLERQLLQRVFLNGSRQERVCNIEKNVS---GMAIN------WINEE 129
Query: 209 -FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKL 259
W++ E I M G+N ++S + +P + +D R ++++ + L
Sbjct: 130 VIWSNQQEG-IITVTDMKGNNSHVLLSA-LKYPANIAVDPVERFIFWSSEVAGSLYRADL 187
Query: 260 DFIDCKSL----EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D + K+L E T V+ + ++L+WI G I + DG + I +
Sbjct: 188 DGVGVKALLETSEKITAVSLDVLDKRLFWIQYNREGSNSLICSCDYDGGSVHISKHPTQH 247
Query: 316 EALALDLENGMLYYSTLK 333
A+ L ++YS K
Sbjct: 248 NLFAMSLFGDRIFYSIWK 265
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 10/55 (18%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNECEQ------PGYCSQMCTNTKGSYICSCNEGY 99
A C C G + D C D++ECE P S C NT+G Y+C C+EGY
Sbjct: 853 ATCQCLKG--FAGDGKLCSDIDECEMGVPVCPPA--SSKCINTEGGYVCRCSEGY 903
>gi|45383257|ref|NP_989783.1| low density lipoprotein receptor precursor [Gallus gallus]
gi|31455368|emb|CAD56163.1| low-density lipoprotein receptor precursor [Gallus gallus]
Length = 891
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 141/306 (46%), Gaps = 50/306 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ ++CDG+ C + +DE CD+ EC CS+ C P+G C CP G L
Sbjct: 303 CIPTERLCDGRRHCRDWSDEPLQHCDVDECSQGTSGCSHGCQDRPIGFRCLCPDGFRLGA 362
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D TC+D++EC + C+Q+C N +G++ C+C EGY E +C+A+ + L+ S R
Sbjct: 363 DGKTCEDVDECAEAERCAQLCINLQGAFKCACAEGYAAEPGGRSCRALAPVSELLLWSRR 422
Query: 124 HSILVADLEEKGKDHRAQDIV--------VSGLDLVEG---------------------- 153
VA R+ + V+ +D+ EG
Sbjct: 423 TLRRVAGSAVGRAGLRSTQWLRGDFPHGAVADVDVAEGNLYWADPTQRRLFRAPLSPPGA 482
Query: 154 --------------LAYDWIGGHIYWLDS---RLNRIEVCDENGTNRIVLAKDNITQPRG 196
LA DW+ +YW DS L + V G + + N ++PRG
Sbjct: 483 PPTPLQLLEGVPTALALDWVHHVLYWGDSTGGALRALPVGGSGGALSATIWQRNGSEPRG 542
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ LDP G LFW+D G P + R+G++G+ ++ + P GL LD+ ++R+Y+AD
Sbjct: 543 IALDPMLGL--LFWSDCGSVPLLGRVGLNGAEPKVLLERGLRCPCGLALDVPSQRLYWAD 600
Query: 257 SKLDFI 262
+L +
Sbjct: 601 RQLHSL 606
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 163/429 (37%), Gaps = 84/429 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC---KHKFGLCSNTCHPTPLGALCTCPPGEI 60
RCV + CDG DC +G+DE GCD A F S C PT E
Sbjct: 261 RCVWGGRRCDGHRDCADGSDED-GCDNAPSCVGPDVFQCRSGECIPT-----------ER 308
Query: 61 LSNDSVTCQD----------MNECEQ-PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L + C+D ++EC Q CS C + + C C +G+ L D TC+
Sbjct: 309 LCDGRRHCRDWSDEPLQHCDVDECSQGTSGCSHGCQDRPIGFRCLCPDGFRLGADGKTCE 368
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDS 168
++ A + R + L +L+ K A+ G LA + + W
Sbjct: 369 DVDECAE----AERCAQLCINLQGAFKCACAEGYAAEPGGRSCRALAP--VSELLLWSRR 422
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
L R+ + R L T+WL G+ P +D
Sbjct: 423 TLRRVA---GSAVGRAGLRS----------------TQWLR----GDFPHGAVADVD--- 456
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE----IKTNVNYSTIFRKLYW 284
+ +YW D RR++ A L+ + T + + LYW
Sbjct: 457 ---VAEGNLYW-----ADPTQRRLFRAPLSPPGAPPTPLQLLEGVPTALALDWVHHVLYW 508
Query: 285 IDEGGNGV-PLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
D G + L +G + S +G +ALD G+L FW+D
Sbjct: 509 GDSTGGALRALPVGGSGGALSATIWQRNGSEPRGIALDPMLGLL-----------FWSDC 557
Query: 344 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403
G P + R+G++G+ ++ + P GL LD+ ++R+Y+AD +L + + G G++
Sbjct: 558 GSVPLLGRVGLNGAEPKVLLERGLRCPCGLALDVPSQRLYWADRQLHSLSSVSVWG-GQR 616
Query: 404 QVILIDLMV 412
+ +L D +
Sbjct: 617 RTLLADPQL 625
>gi|312374277|gb|EFR21862.1| hypothetical protein AND_16242 [Anopheles darlingi]
Length = 1709
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 149/344 (43%), Gaps = 72/344 (20%)
Query: 33 CKHKFGLCSNTC---HPTPLGALCTCPPGEILSNDSVTC---QDMNECEQPGYCSQMCTN 86
C+ G CS+ C P G C CP G L + QDM Q +++ +
Sbjct: 359 CRRNNGNCSHLCLLSSTNPAGYSCACPTGIKLLTATQCAEGPQDMLFVVQRSQINRISLD 418
Query: 87 TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHR------- 139
+ + C + ++ A + I +D EE
Sbjct: 419 SPDYSVVPL-----------PCGKVRYAIAIDYDPIENYIYWSDKEESAIKRAPADGSGP 467
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
A++IV + + +GLA DW+ ++YW D+ +RI+VC +GT R VL DN+ +PR + L
Sbjct: 468 AEEIVTAEIQDPDGLAVDWLARNLYWTDTGTDRIQVCRLDGTFRRVLIYDNLVEPRAIAL 527
Query: 200 DPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
P+ G W+FW+DWGE +P+IER +DG+ R I+S ++WPNG+ LD+A R++Y+ D+K
Sbjct: 528 APTLG--WMFWSDWGEKDPKIERASLDGTERVLIVSQNLFWPNGIALDVAARKIYWCDAK 585
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D KI NMDGS + ++S L
Sbjct: 586 AD----------------------------------KIEVVNMDGSGRNTILSDNLPHVF 611
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
L L LY WTDW + G++R TI
Sbjct: 612 GLSLLGDYLY-----------WTDWQRRSIDRANKLTGTDRVTI 644
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 112/228 (49%), Gaps = 46/228 (20%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRST-IISTKIYWPNGLTLDIATRRVYF 254
+ +D P +++W+D E I+R DGS + I++ +I P+GL +D
Sbjct: 435 AIAIDYDPIENYIYWSD-KEESAIKRAPADGSGPAEEIVTAEIQDPDGLAVDW------- 486
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
+ R LYW D G + +I +DG+ +L+ L
Sbjct: 487 -----------------------LARNLYWTDTGTD----RIQVCRLDGTFRRVLIYDNL 519
Query: 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGL 373
E A+ L + W+FW+DWGE +P+IER +DG+ R I+S ++WPNG+
Sbjct: 520 VEPRAIALAPTL---------GWMFWSDWGEKDPKIERASLDGTERVLIVSQNLFWPNGI 570
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
LD+A R++Y+ D+K D I+ N DG+GR ++ +L F L+GD
Sbjct: 571 ALDVAARKIYWCDAKADKIEVVNMDGSGRNTILSDNLPHVFGLSLLGD 618
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 95/206 (46%), Gaps = 54/206 (26%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR---IVLAKDNITQPRGMML 199
++ GLD EGLA DW +YW D NRIEV + GT R VL ++ QPR + L
Sbjct: 156 VITDGLDKPEGLAIDWYTDKLYWTDGGSNRIEVA-QLGTGRHQQKVLIWSDLDQPRAIAL 214
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDG--SNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
P R++ WTDWGE+P+IER MDG +R+ +++ +I+WPNGL +D+A VY+ D
Sbjct: 215 VPE--RRYMIWTDWGESPKIERASMDGDPQSRTVLVNDRIFWPNGLAVDLAQELVYWVDG 272
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
F+D L DGSN LV Y
Sbjct: 273 NQRFLDVMDL----------------------------------DGSNRRTLVRNLDYP- 297
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDW 343
YS R+LFWTDW
Sbjct: 298 -----------YSLTFTPRYLFWTDW 312
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 140/345 (40%), Gaps = 86/345 (24%)
Query: 69 QDMNECE-QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTC------------------- 108
Q N C G CSQ+C N Y+C C Y L DN TC
Sbjct: 663 QGTNPCAINNGGCSQLCLNRPRDYVCRCQLDYELGRDNKTCFVPPAFLLFSNHGNIGRIS 722
Query: 109 -KAINHS--AAFLIISNRH--SILVAD-----LEEKGK--------DHRAQDIVVSGLDL 150
+ NH+ A F + + H + VAD + +K K Q IV +GL
Sbjct: 723 IDSHNHTDYAPFRSVVDAHYLDVDVADRRLYWVSQKQKYISRAYINGSDVQRIVETGLMQ 782
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+ ++YW D+ RIEV +G +R +L I +P+ ++L+P G ++W
Sbjct: 783 PEGIAVDWLAHNVYWTDADARRIEVARLDGGSRRILIWKGIEEPKNLILEPRKGL--MYW 840
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
T+W + I R MDGS TIIS + GLTLD TRR+Y+A
Sbjct: 841 TEWPSD-SIRRAAMDGSELMTIISGTNH-AIGLTLDPDTRRLYWAR-------------- 884
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
P I A+ DG LV ++ NG + +
Sbjct: 885 -------------------QSSPTGIESADWDGKRRMRLVMADSGDS------NGFVPAA 919
Query: 331 TLKCTRWLFWTDW--GENPRIERIGMDGSNRSTIISTKIYWPNGL 373
W++W DW GE R + G NR TI+ T + + L
Sbjct: 920 VTIYQDWVYWADWTTGEIGRANK--STGENR-TIVHTNLRYTYSL 961
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 88/177 (49%), Gaps = 33/177 (18%)
Query: 252 VYFADSKLDFIDCKSLEI----KTNVNYSTIFR----------------KLYWIDEGGNG 291
V + ++ L+ I C S ++ +T N +T+ KLYW D G N
Sbjct: 126 VCWTENTLEAIKCGSAQVANGTRTVTNKTTVITDGLDKPEGLAIDWYTDKLYWTDGGSNR 185
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
+ ++ + +L+ L + A+ L + R++ WTDWGE+P+IER
Sbjct: 186 I--EVAQLGTGRHQQKVLIWSDLDQPRAIAL---------VPERRYMIWTDWGESPKIER 234
Query: 352 IGMDG--SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
MDG +R+ +++ +I+WPNGL +D+A VY+ D F+D + DG+ R+ ++
Sbjct: 235 ASMDGDPQSRTVLVNDRIFWPNGLAVDLAQELVYWVDGNQRFLDVMDLDGSNRRTLV 291
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 142/335 (42%), Gaps = 51/335 (15%)
Query: 111 INHSAAFLIISNRHSILVADLEEKGKDHRA------QDIVVSGLDLV---EGLAYDWIGG 161
++ A ++ R ++ D E K RA Q V D + GLA D
Sbjct: 206 LDQPRAIALVPERRYMIWTDWGESPKIERASMDGDPQSRTVLVNDRIFWPNGLAVDLAQE 265
Query: 162 HIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP---- 217
+YW+D ++V D +G+NR L + N+ P + P R+LFWTDW
Sbjct: 266 LVYWVDGNQRFLDVMDLDGSNRRTLVR-NLDYPYSLTFTP----RYLFWTDWNNGTLHYY 320
Query: 218 --RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN- 274
++R SN I+ + +L A + + + +C L + ++ N
Sbjct: 321 DIELDRHRELLSNTQVPITVHAW---DASLQPAAKTATGNPCRRNNGNCSHLCLLSSTNP 377
Query: 275 --YSTIFR---KLYWIDEGGNGVP--------LKIGKANMDGSNASI--LVSGQLYEALA 319
YS KL + G +I + ++D + S+ L G++ A+A
Sbjct: 378 AGYSCACPTGIKLLTATQCAEGPQDMLFVVQRSQINRISLDSPDYSVVPLPCGKVRYAIA 437
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS-TIISTKIYWPNGLTLDIA 378
+D + +++W+D E I+R DGS + I++ +I P+GL +D
Sbjct: 438 IDYD---------PIENYIYWSD-KEESAIKRAPADGSGPAEEIVTAEIQDPDGLAVDWL 487
Query: 379 TRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
R +Y+ D+ D I C DGT R +V++ D +VE
Sbjct: 488 ARNLYWTDTGTDRIQVCRLDGTFR-RVLIYDNLVE 521
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 16/146 (10%)
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI---TQPRGMMLDPSPGTRWLFW 210
+A D IG ++W S N I + +G N + + +I +PR + L P R LFW
Sbjct: 1079 MAIDPIGRLLFWSCSHTNTINITTLDG-NIVSIGNVDIGRTEKPRSLALHPM--KRLLFW 1135
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK-LDFIDCKSLEI 269
TD G I R +DGS R +I TK+ L LD R+++A K +D +D +
Sbjct: 1136 TDVGTAQSITRAKLDGSQRVELI-TKLEGIQALALDPQLNRLFYAHGKRIDTMDINGQNV 1194
Query: 270 KTNV--------NYSTIFRKLYWIDE 287
+T V + + + +YW+DE
Sbjct: 1195 RTLVAEHISMVSSIAALDGFIYWLDE 1220
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 121/339 (35%), Gaps = 98/339 (28%)
Query: 144 VVSGLDLVEGLAYDWIGGHIYWL-DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++SG + GL D +YW S IE D +G R+ L + G + P+
Sbjct: 861 IISGTNHAIGLTLDPDTRRLYWARQSSPTGIESADWDGKRRMRLVMADSGDSNGFV--PA 918
Query: 203 PGT---RWLFWTDW--GENPRIERIGMDGSNRSTIISTKIYW------------------ 239
T W++W DW GE R + G NR TI+ T + +
Sbjct: 919 AVTIYQDWVYWADWTTGEIGRANK--STGENR-TIVHTNLRYTYSLLAFHHGRQSGSNQC 975
Query: 240 -----------------------PNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN---- 272
P TL+ A RR F + D + +
Sbjct: 976 RTNNGGCTHLCLALGQRKMTCACPTHYTLN-ANRRNSFGRFVPNTADSPDIPLPVTGKNI 1034
Query: 273 --VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
V Y + R +YWID G G ++ N + SI + ++ +A+D +L++S
Sbjct: 1035 RAVEYDVLTRHIYWID--GRGPVIRRAFDNGTNTKVSINPTSSPFD-MAIDPIGRLLFWS 1091
Query: 331 -----TLKCT-----------------------------RWLFWTDWGENPRIERIGMDG 356
T+ T R LFWTD G I R +DG
Sbjct: 1092 CSHTNTINITTLDGNIVSIGNVDIGRTEKPRSLALHPMKRLLFWTDVGTAQSITRAKLDG 1151
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSK-LDFIDF 394
S R +I TK+ L LD R+++A K +D +D
Sbjct: 1152 SQRVELI-TKLEGIQALALDPQLNRLFYAHGKRIDTMDI 1189
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 37/179 (20%)
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIF------- 279
+N++T+I+ + P GL +D T ++Y+ D + I+ L + I+
Sbjct: 151 TNKTTVITDGLDKPEGLAIDWYTDKLYWTDGGSNRIEVAQLGTGRHQQKVLIWSDLDQPR 210
Query: 280 --------RKLYWIDEGGNGVPLKIGKANMDGSNAS--ILVSGQLY--EALALDLENGML 327
R + W D G + KI +A+MDG S +LV+ +++ LA+DL ++
Sbjct: 211 AIALVPERRYMIWTDWGESP---KIERASMDGDPQSRTVLVNDRIFWPNGLAVDLAQELV 267
Query: 328 YYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 386
Y W D G ++ + +DGSNR T++ Y P LT R +++ D
Sbjct: 268 Y-----------WVD-GNQRFLDVMDLDGSNRRTLVRNLDY-PYSLTF--TPRYLFWTD 311
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 68/170 (40%), Gaps = 38/170 (22%)
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTRW 337
R+LYW+ + I +A ++GS+ +V L E +A+D W
Sbjct: 750 RRLYWVSQKQK----YISRAYINGSDVQRIVETGLMQPEGIAVD---------------W 790
Query: 338 L----FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
L +WTD + RIE +DG +R +I I P L L+ +Y+ + D I
Sbjct: 791 LAHNVYWTD-ADARRIEVARLDGGSRRILIWKGIEEPKNLILEPRKGLMYWTEWPSDSIR 849
Query: 394 FCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGA 443
DG+ E + G N L LD + LY++ + +
Sbjct: 850 RAAMDGS------------ELMTIISGTNHAIGLTLDPDTRRLYWARQSS 887
>gi|410932624|ref|XP_003979693.1| PREDICTED: low-density lipoprotein receptor-related protein 6-like,
partial [Takifugu rubripes]
Length = 223
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 84/119 (70%), Gaps = 2/119 (1%)
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
V+ GL +GLA DW+G +YW DS NRIEV + +G+ R +L + QPR + LDP
Sbjct: 74 VIPGLASPDGLACDWLGRKLYWTDSETNRIEVAELDGSMRKILFWQELDQPRAIALDPER 133
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWGE P+IER GMDG+NRS II +IYWPNGLTLD +++Y+AD+K FI
Sbjct: 134 G--FMYWTDWGEIPKIERAGMDGTNRSMIIDKEIYWPNGLTLDYGQQKLYWADAKHSFI 190
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 77/125 (61%), Gaps = 17/125 (13%)
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRW 337
RKLYW D N +I A +DGS IL +L + A+ALD E G +Y
Sbjct: 91 RKLYWTDSETN----RIEVAELDGSMRKILFWQELDQPRAIALDPERGFMY--------- 137
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
WTDWGE P+IER GMDG+NRS II +IYWPNGLTLD +++Y+AD+K FI C+
Sbjct: 138 --WTDWGEIPKIERAGMDGTNRSMIIDKEIYWPNGLTLDYGQQKLYWADAKHSFIHRCDL 195
Query: 398 DGTGR 402
DG+ R
Sbjct: 196 DGSSR 200
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 29/167 (17%)
Query: 208 LFWTDWGENPRIERIGMDGSNRSTI--ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
++W+D E I+R + S T+ + + P+GL D R++Y+ DS+ + I+
Sbjct: 48 IYWSDVSEEA-IKRTVFNQSGAHTVQTVIPGLASPDGLACDWLGRKLYWTDSETNRIEVA 106
Query: 266 SLE--IKTNVNYSTIFRK-----------LYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
L+ ++ + + + + +YW D G +P KI +A MDG+N S+++
Sbjct: 107 ELDGSMRKILFWQELDQPRAIALDPERGFMYWTDWG--EIP-KIERAGMDGTNRSMIIDK 163
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNR 359
++Y L L+ G + L+W D ++ I R +DGS+R
Sbjct: 164 EIYWPNGLTLDYGQ---------QKLYWAD-AKHSFIHRCDLDGSSR 200
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 24/151 (15%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
L++ A + +NA+++V G L +A A+D +Y L ++W+D E I+R
Sbjct: 14 LRLVDAAHEKANATVVVGG-LEDAAAVD----YVYSQGL-----IYWSDVSEEA-IKRTV 62
Query: 354 MDGSNRSTI--ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
+ S T+ + + P+GL D R++Y+ DS+ + I+ DG+ R+ + +L
Sbjct: 63 FNQSGAHTVQTVIPGLASPDGLACDWLGRKLYWTDSETNRIEVAELDGSMRKILFWQEL- 121
Query: 412 VEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD E G +Y++ G
Sbjct: 122 ----------DQPRAIALDPERGFMYWTDWG 142
>gi|125827065|ref|XP_001337289.1| PREDICTED: hypothetical protein LOC796880 [Danio rerio]
Length = 3496
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 179/413 (43%), Gaps = 107/413 (25%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGL-CSNTCHPTPLGALCTCPPGEILSN 63
C++ VC+ +DC +G+DEG GC C C + C TP GA C C G L +
Sbjct: 2566 CMDPDLVCNKASDCADGSDEGVGCLKNNCSSPGSPSCQHYCINTPHGARCGCKTGFKLHS 2625
Query: 64 DSVTCQDMNECE--QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D ++C D++EC+ QP CS C N GSYIC C+ ++LE D H+CK + + L++S
Sbjct: 2626 DGLSCVDIDECKEIQPAACSHKCFNRLGSYICQCHPEFLLEPDGHSCKTADEPS--LLVS 2683
Query: 122 NRHSIL--------VADLEEKGK--------DHRAQDIVVSGLD---------------- 149
+ +L + L G+ D R + + + L+
Sbjct: 2684 EQDELLNMGLRSFSIQTLTAPGRKPIFSLDYDLRERRVYWASLEDESIKYAFHGEKDNTG 2743
Query: 150 -LVEG-----LAYDWIGGHIYWLDS--------RLNRIEVCDENGTNRIVLAKDNITQPR 195
+V+G +A DW+G ++YW+D RL V + N +V+ +++ QP
Sbjct: 2744 TIVKGVKSDCIAIDWMGRNLYWVDGVAGQILAVRLTNSVV---HPQNYVVVLDEDLKQPN 2800
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
++L P G + W+ G +I R MDGS+R +I + WP +T+DI T R+Y+
Sbjct: 2801 SLVLLPQKGI--MLWSQVGGQAQIGRSSMDGSDRRAVIRRGLNWPVSVTVDILTDRLYWT 2858
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D KL IG A +DG N L +
Sbjct: 2859 DKKLGC----------------------------------IGSATLDGENIRFLQLSHMP 2884
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY 368
L++ + N M+Y W+D +R + G+N+ T + K++
Sbjct: 2885 SPLSMAVFNDMIY-----------WSD------TQRRSVQGANKLTGKNRKVF 2920
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 14/107 (13%)
Query: 337 WLFWTDWGENPR--IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDF 394
++FW + G N IER+ MDG NR T++ P GLTLD++ RR+Y+ ++
Sbjct: 29 FMFWMNKGVNGEMTIERVDMDGMNRKTLVFVTAQLPRGLTLDVSARRLYWISVHKMSVES 88
Query: 395 CNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTE 441
DGTGR D+ G PA AL + NG Y++ +
Sbjct: 89 VRTDGTGRH--TFWDVF----------QGSPAQALAVFNGWFYWADD 123
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 14/123 (11%)
Query: 280 RKLYWIDE-GGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTR 336
R LYW+D G + +++ + + N +++ L + +L L + G++
Sbjct: 2761 RNLYWVDGVAGQILAVRLTNSVVHPQNYVVVLDEDLKQPNSLVLLPQKGIM--------- 2811
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
W+ G +I R MDGS+R +I + WP +T+DI T R+Y+ D KL I
Sbjct: 2812 --LWSQVGGQAQIGRSSMDGSDRRAVIRRGLNWPVSVTVDILTDRLYWTDKKLGCIGSAT 2869
Query: 397 YDG 399
DG
Sbjct: 2870 LDG 2872
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 207 WLFWTDWGENPR--IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
++FW + G N IER+ MDG NR T++ P GLTLD++ RR+Y+
Sbjct: 29 FMFWMNKGVNGEMTIERVDMDGMNRKTLVFVTAQLPRGLTLDVSARRLYW 78
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
D++ LA DW+ ++YW + + V G V+ + + + L P P R
Sbjct: 3073 DILSALALDWVTKNLYWSSMKRPELFVTSPGGKLTAVVLQAELAGTVSIALHP-PSGRMC 3131
Query: 209 FWTDWGEN-----PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
F T G P+++ MDG+NR+ + S K P L L +Y+AD D I
Sbjct: 3132 F-TAVGRRGADMLPQVDCAHMDGANRTRLWS-KAKMPVSLALSEKGNTLYWADIGSDLI 3188
>gi|395735263|ref|XP_003776564.1| PREDICTED: pro-epidermal growth factor [Pongo abelii]
Length = 1167
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 136/297 (45%), Gaps = 52/297 (17%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C L C CS+ C T G LC CP G +L D TC +
Sbjct: 382 CPVGFVLLPDGKRCHQLVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SG 438
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
C P G CSQ+C + S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 439 CSSPDNGGCSQLCIPLSPVSWECDCFPGYDLQLDKKSCAA-SGPQPFLLFANSQDIRHMH 497
Query: 131 L----------EEKGK----DH-------------------------RAQDIVVSGLDLV 151
++ G DH + + ++ G+D+
Sbjct: 498 FDGTDYGTLLSQQMGTVYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEGVDVP 557
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EGLA DWIG YW D + I D NG ++ K+NI+QPRG+ + P + LFWT
Sbjct: 558 EGLAVDWIGRRFYWTDRGKSLIGRSDLNGKRSKIIMKENISQPRGIAVHPM--AKRLFWT 615
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
D G NPRIE + G R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 616 DTGINPRIESSSLQGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLD 672
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 171/426 (40%), Gaps = 87/426 (20%)
Query: 34 KHKFGLCSNT-CHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGSY 91
K + G CS+T C P LCTC G LS D C+D+NEC + C+ C NT GSY
Sbjct: 319 KLRKGNCSSTVCGQDPQSHLCTCAEGYALSRDRKYCEDVNECAFWNHGCTLGCKNTPGSY 378
Query: 92 ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD-----------LEEKGK---- 136
C+C G+VL D C + + + + +L ++ LE GK
Sbjct: 379 YCTCPVGFVLLPDGKRCHQLVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTCSG 438
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
D+ + L V D G+ LD + C +G +L ++
Sbjct: 439 CSSPDNGGCSQLCIPLSPVS-WECDCFPGYDLQLDKK-----SCAASGPQPFLLFANSQD 492
Query: 193 QPR--------GMMLDPSPGTRWLFWTDWGENPR---------IERIGMDGSNRSTIIST 235
G +L GT + D EN IER MDGS R +I
Sbjct: 493 IRHMHFDGTDYGTLLSQQMGTVYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEE 552
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
+ P GL +D I R+ YW D G +
Sbjct: 553 GVDVPEGLAVDW------------------------------IGRRFYWTDRGKS----L 578
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
IG+++++G + I++ + + + + + LFWTD G NPRIE +
Sbjct: 579 IGRSDLNGKRSKIIMKENISQPRGIAVH---------PMAKRLFWTDTGINPRIESSSLQ 629
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFT 415
G R I S+ + WP+G+T+D T ++Y+ D+K I+ N DG+ R+++ D+ F
Sbjct: 630 GLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLDGSKRRRLTQNDVGHPFA 689
Query: 416 NDLMGD 421
+ D
Sbjct: 690 VAVFED 695
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 114/258 (44%), Gaps = 37/258 (14%)
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEG 153
SC EG + N TC A FLI S+ +SI D E G ++ AQ +V +G+ ++
Sbjct: 27 SCPEGTLSGNGNSTCVG---PAPFLIFSHGNSIFRIDTE--GTNY-AQLVVDAGVSVIMD 80
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRWL--- 208
Y+ IYW+D ++ NG+ R+ + N++ GM ++ W+
Sbjct: 81 FHYN--EKRIYWVDLERQLLQRVFLNGSRQERVCNIEKNVS---GMAIN------WINEE 129
Query: 209 -FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKL 259
W++ E I M G+N ++S + +P + +D R ++++ + L
Sbjct: 130 VIWSNHQEG-IITVTDMKGNNSHVLLSA-LKYPANIAVDPVERFIFWSSEVAGSLYRADL 187
Query: 260 DFIDCKSL----EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D ++ ++L E T V+ + ++L+WI G I + DG + I +
Sbjct: 188 DGVEVRALLETSEKITAVSLDVLEKRLFWIQYNREGSNSLICSCDYDGGSVHISKHPTQH 247
Query: 316 EALALDLENGMLYYSTLK 333
A+ L ++YST K
Sbjct: 248 NLFAMSLFGDHIFYSTWK 265
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 10/55 (18%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNECEQ------PGYCSQMCTNTKGSYICSCNEGY 99
A C C G + D C D++ECE P S C NT+G Y+C C+EGY
Sbjct: 853 ATCQCLKG--FAGDGKLCSDIDECEMGVPVCPPA--SSKCINTEGGYVCRCSEGY 903
>gi|37360112|dbj|BAC98034.1| mKIAA0816 protein [Mus musculus]
Length = 1167
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 125/248 (50%), Gaps = 21/248 (8%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 631 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDRKTCDPSPETYLLFSSRGSIRRISLDT 690
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 691 DDHTDVHVPVPGLNNVISLDYDSVHGK-VYYTDVFLDVIRRADLNGSNMET--------- 740
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 741 VIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 800
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD I
Sbjct: 801 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRI 858
Query: 263 DCKSLEIK 270
+ L K
Sbjct: 859 ESADLNGK 866
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 145/333 (43%), Gaps = 92/333 (27%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---- 126
N C + G C+ +C + +Y C+C G+ + ++H C FL+ + R I
Sbjct: 19 NRCGDNNGGCTHLCLPSGQNYTCACPTGF-RKINSHACA--QSLDKFLLFARRMDIRRIS 75
Query: 127 -----------------------------------LVADLEEKGK-DHRAQDIVV-SGLD 149
+ D + K D Q++VV + L+
Sbjct: 76 FDTEDLSDDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLE 135
Query: 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
GLA DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR ++++P G +++
Sbjct: 136 SPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGG--YMY 193
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEI 269
WTDWG +P+IER GMD S+R IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 194 WTDWGASPKIERAGMDASSRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF 248
Query: 270 KTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
A +DGS +L+ QL L L +Y
Sbjct: 249 -----------------------------AGLDGSKRKVLIGSQLPHPFGLTLYGQRIY- 278
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G +R T+
Sbjct: 279 ----------WTDWQTKSIQSADRLTGLDRETL 301
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 128/248 (51%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L D TC PG S + +
Sbjct: 325 CAVENGGCSHLCLRSPNPSGFSCTCPTGINLLRDGKTCS-------PGMNSFLIFARRID 377
Query: 90 SYICSCNEGY---VLEYDNHTCK---AIN----HSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K AI + S H I A L+ G H
Sbjct: 378 VRMVSLDIPYFADVVVPINMTMKNTIAIGVDPLEGKVYWSDSTLHRISRASLD--GSQH- 434
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 435 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 493
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D + ++ +AD+
Sbjct: 494 YHEMG--FMYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHT 551
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 552 ERIEVADL 559
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 107/222 (48%), Gaps = 32/222 (14%)
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR--RVYFADS 257
DPSP T LF I RI +D + + + N ++LD + +VY+ D
Sbjct: 668 DPSPETYLLF----SSRGSIRRISLDTDDHTDVHVPVPGLNNVISLDYDSVHGKVYYTDV 723
Query: 258 KLDFI---DCKSLEIKTNVNYST----------IFRKLYWIDEGGNGVPLKIGKANMDGS 304
LD I D ++T + + + R LYW D G N I + +DGS
Sbjct: 724 FLDVIRRADLNGSNMETVIGHGLKTTDGLAVDWVARNLYWTDTGRN----TIEASRLDGS 779
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+L++ L E A+ + +LFWTDWG +IER +DGS R +I+
Sbjct: 780 CRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERKVLIN 830
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 831 TDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 872
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 136/333 (40%), Gaps = 98/333 (29%)
Query: 78 GYCSQMCTNTK--GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G CS +C + + C+C G L D TC +S FLI + R + + L+
Sbjct: 330 GGCSHLCLRSPNPSGFSCTCPTGINLLRDGKTCSPGMNS--FLIFARRIDVRMVSLDIP- 386
Query: 136 KDHRAQDIVVSGLDLVEGLA--YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
+ A +V + + +A D + G +YW DS L+
Sbjct: 387 --YFADVVVPINMTMKNTIAIGVDPLEGKVYWSDSTLH---------------------- 422
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
RI R +DGS II+T + +GL +D
Sbjct: 423 ------------------------RISRASLDGSQHEDIITTGLQTTDGLAVD------- 451
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
I RK+YW D G N +I N+DGS +LV
Sbjct: 452 -----------------------AIGRKVYWTDTGTN----RIEVGNLDGSMRKVLVWQN 484
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGL
Sbjct: 485 LDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGL 535
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
T+D + ++ +AD+ + I+ + +G R ++
Sbjct: 536 TVDKTSSQLLWADAHTERIEVADLNGANRHTLV 568
>gi|260828981|ref|XP_002609441.1| hypothetical protein BRAFLDRAFT_93486 [Branchiostoma floridae]
gi|229294797|gb|EEN65451.1| hypothetical protein BRAFLDRAFT_93486 [Branchiostoma floridae]
Length = 973
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 141/332 (42%), Gaps = 96/332 (28%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L++VCDG TDC + +DEG GLC++ C
Sbjct: 503 ECLPLSQVCDGTTDCADASDEG------------GLCASVC------------------- 531
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
+ G C+ C T G +CSC+ G+ L D TC A L+ S
Sbjct: 532 -----------QDNGGCTGTCQATPGGRVCSCHPGFKLLEDGTTCAG---GPAKLLFSTG 577
Query: 124 HSILVADLEEKGKDHRAQD--------------------------------------IVV 145
+ I +L + + D + V
Sbjct: 578 YEIRAINLNSRQYESVVVDNAGHMVGIEYNLNTQEIYWTDATLGTINRLSLTTGNWSMFV 637
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPG 204
GL+ +GLA DW+G ++YW D+ N + VC + +R VL + NI +PR + L+ +
Sbjct: 638 DGLESPDGLAVDWVGNNLYWTDAGTNMVGVCSLPSCQHRAVLLQHNIDKPRAIALNMA-- 695
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
R L+W++WG P+IER MD NR I++T + WPN L +D +R+YFAD++LD I+
Sbjct: 696 ERTLYWSEWGAEPKIERADMDSGNRKLIVATGLIWPNALVVDDILKRLYFADARLDKIEY 755
Query: 265 KSLEIKTNVNYSTIFRK----------LYWID 286
E K V+ T + +YW D
Sbjct: 756 CDYEGKNRVSLPTTVKHPFGLALFEDLMYWTD 787
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 26/198 (13%)
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID------------CK 265
I I ++ +++ G+ ++ T+ +Y+ D+ L I+
Sbjct: 579 EIRAINLNSRQYESVVVDNAGHMVGIEYNLNTQEIYWTDATLGTINRLSLTTGNWSMFVD 638
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG-SNASILVSGQLYEALALDLEN 324
LE + + LYW D G N +G ++ + ++L+ + + A+ L
Sbjct: 639 GLESPDGLAVDWVGNNLYWTDAGTN----MVGVCSLPSCQHRAVLLQHNIDKPRAIALNM 694
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384
R L+W++WG P+IER MD NR I++T + WPN L +D +R+YF
Sbjct: 695 A---------ERTLYWSEWGAEPKIERADMDSGNRKLIVATGLIWPNALVVDDILKRLYF 745
Query: 385 ADSKLDFIDFCNYDGTGR 402
AD++LD I++C+Y+G R
Sbjct: 746 ADARLDKIEYCDYEGKNR 763
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 179 NGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY 238
+G R ++ + +PRG+ +DP G +LF +DWG P+IER+ +DG +R ++ + +
Sbjct: 5 DGAYRSTFLRNRLDKPRGIAVDPVKG--YLFLSDWGSEPKIERVTLDGLDRRILVGSGLR 62
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
WPNG+TLD +Y+AD+ D I+
Sbjct: 63 WPNGITLDFTEGELYWADAGTDSIE 87
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%)
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
+LF +DWG P+IER+ +DG +R ++ + + WPNG+TLD +Y+AD+ D I+ +
Sbjct: 31 YLFLSDWGSEPKIERVTLDGLDRRILVGSGLRWPNGITLDFTEGELYWADAGTDSIESVD 90
Query: 397 YDGTGRQQVI 406
DG R+ V+
Sbjct: 91 TDGANRRTVL 100
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 148 LDLVEGLAYDWIGGHIYWLD-SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTR 206
LD G+A D + G+++ D +IE +G +R +L + P G+ LD + G
Sbjct: 17 LDKPRGIAVDPVKGYLFLSDWGSEPKIERVTLDGLDRRILVGSGLRWPNGITLDFTEGE- 75
Query: 207 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKS 266
L+W D G + IE + DG+NR T++ + P LT ++ R+++ D I S
Sbjct: 76 -LYWADAGTD-SIESVDTDGANRRTVLG-NLQHPFALT--VSQNRIFWTDWNTASI--HS 128
Query: 267 LEIKTNVNYSTIFRKLYWI 285
T ++ + + + + I
Sbjct: 129 ANKHTGISSTVLLSRQHGI 147
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 14/129 (10%)
Query: 110 AINHSAAFLIISNRHS-ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS 168
A++ +L +S+ S + + G D R +V SGL G+ D+ G +YW D+
Sbjct: 24 AVDPVKGYLFLSDWGSEPKIERVTLDGLDRRI--LVGSGLRWPNGITLDFTEGELYWADA 81
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ IE D +G NR + N+ P + + +FWTDW + +N
Sbjct: 82 GTDSIESVDTDGANRRTVLG-NLQHPFALTV----SQNRIFWTDW------NTASIHSAN 130
Query: 229 RSTIISTKI 237
+ T IS+ +
Sbjct: 131 KHTGISSTV 139
>gi|297674164|ref|XP_002815106.1| PREDICTED: pro-epidermal growth factor isoform 2 [Pongo abelii]
Length = 1166
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 136/297 (45%), Gaps = 52/297 (17%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C L C CS+ C T G LC CP G +L D TC +
Sbjct: 340 CPVGFVLLPDGKRCHQLVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SG 396
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
C P G CSQ+C + S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 397 CSSPDNGGCSQLCIPLSPVSWECDCFPGYDLQLDKKSCAA-SGPQPFLLFANSQDIRHMH 455
Query: 131 L----------EEKGK----DH-------------------------RAQDIVVSGLDLV 151
++ G DH + + ++ G+D+
Sbjct: 456 FDGTDYGTLLSQQMGTVYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEGVDVP 515
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EGLA DWIG YW D + I D NG ++ K+NI+QPRG+ + P + LFWT
Sbjct: 516 EGLAVDWIGRRFYWTDRGKSLIGRSDLNGKRSKIIMKENISQPRGIAVHPM--AKRLFWT 573
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
D G NPRIE + G R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 574 DTGINPRIESSSLQGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLD 630
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 114/258 (44%), Gaps = 37/258 (14%)
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEG 153
SC EG + N TC A FLI S+ +SI D E G ++ AQ +V +G+ ++
Sbjct: 27 SCPEGTLSGNGNSTCVG---PAPFLIFSHGNSIFRIDTE--GTNY-AQLVVDAGVSVIMD 80
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRWL--- 208
Y+ IYW+D ++ NG+ R+ + N++ GM ++ W+
Sbjct: 81 FHYN--EKRIYWVDLERQLLQRVFLNGSRQERVCNIEKNVS---GMAIN------WINEE 129
Query: 209 -FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKL 259
W++ E I M G+N ++S + +P + +D R ++++ + L
Sbjct: 130 VIWSNHQEG-IITVTDMKGNNSHVLLSA-LKYPANIAVDPVERFIFWSSEVAGSLYRADL 187
Query: 260 DFIDCKSL----EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D ++ ++L E T V+ + ++L+WI G I + DG + I +
Sbjct: 188 DGVEVRALLETSEKITAVSLDVLEKRLFWIQYNREGSNSLICSCDYDGGSVHISKHPTQH 247
Query: 316 EALALDLENGMLYYSTLK 333
A+ L ++YST K
Sbjct: 248 NLFAMSLFGDHIFYSTWK 265
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 10/55 (18%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNECEQ------PGYCSQMCTNTKGSYICSCNEGY 99
A C C G + D C D++ECE P S C NT+G Y+C C+EGY
Sbjct: 811 ATCQCLKG--FAGDGKLCSDIDECEMGVPVCPPA--SSKCINTEGGYVCRCSEGY 861
>gi|297674162|ref|XP_002815105.1| PREDICTED: pro-epidermal growth factor isoform 1 [Pongo abelii]
Length = 1208
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 136/297 (45%), Gaps = 52/297 (17%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C L C CS+ C T G LC CP G +L D TC +
Sbjct: 382 CPVGFVLLPDGKRCHQLVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SG 438
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
C P G CSQ+C + S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 439 CSSPDNGGCSQLCIPLSPVSWECDCFPGYDLQLDKKSCAA-SGPQPFLLFANSQDIRHMH 497
Query: 131 L----------EEKGK----DH-------------------------RAQDIVVSGLDLV 151
++ G DH + + ++ G+D+
Sbjct: 498 FDGTDYGTLLSQQMGTVYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEGVDVP 557
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EGLA DWIG YW D + I D NG ++ K+NI+QPRG+ + P + LFWT
Sbjct: 558 EGLAVDWIGRRFYWTDRGKSLIGRSDLNGKRSKIIMKENISQPRGIAVHPM--AKRLFWT 615
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
D G NPRIE + G R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 616 DTGINPRIESSSLQGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLD 672
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 171/426 (40%), Gaps = 87/426 (20%)
Query: 34 KHKFGLCSNT-CHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGSY 91
K + G CS+T C P LCTC G LS D C+D+NEC + C+ C NT GSY
Sbjct: 319 KLRKGNCSSTVCGQDPQSHLCTCAEGYALSRDRKYCEDVNECAFWNHGCTLGCKNTPGSY 378
Query: 92 ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD-----------LEEKGK---- 136
C+C G+VL D C + + + + +L ++ LE GK
Sbjct: 379 YCTCPVGFVLLPDGKRCHQLVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTCSG 438
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
D+ + L V D G+ LD + C +G +L ++
Sbjct: 439 CSSPDNGGCSQLCIPLSPVS-WECDCFPGYDLQLDKK-----SCAASGPQPFLLFANSQD 492
Query: 193 QPR--------GMMLDPSPGTRWLFWTDWGENPR---------IERIGMDGSNRSTIIST 235
G +L GT + D EN IER MDGS R +I
Sbjct: 493 IRHMHFDGTDYGTLLSQQMGTVYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEE 552
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
+ P GL +D I R+ YW D G +
Sbjct: 553 GVDVPEGLAVDW------------------------------IGRRFYWTDRGKS----L 578
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
IG+++++G + I++ + + + + + LFWTD G NPRIE +
Sbjct: 579 IGRSDLNGKRSKIIMKENISQPRGIAVH---------PMAKRLFWTDTGINPRIESSSLQ 629
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFT 415
G R I S+ + WP+G+T+D T ++Y+ D+K I+ N DG+ R+++ D+ F
Sbjct: 630 GLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLDGSKRRRLTQNDVGHPFA 689
Query: 416 NDLMGD 421
+ D
Sbjct: 690 VAVFED 695
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 114/258 (44%), Gaps = 37/258 (14%)
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEG 153
SC EG + N TC A FLI S+ +SI D E G ++ AQ +V +G+ ++
Sbjct: 27 SCPEGTLSGNGNSTCVG---PAPFLIFSHGNSIFRIDTE--GTNY-AQLVVDAGVSVIMD 80
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRWL--- 208
Y+ IYW+D ++ NG+ R+ + N++ GM ++ W+
Sbjct: 81 FHYN--EKRIYWVDLERQLLQRVFLNGSRQERVCNIEKNVS---GMAIN------WINEE 129
Query: 209 -FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKL 259
W++ E I M G+N ++S + +P + +D R ++++ + L
Sbjct: 130 VIWSNHQEG-IITVTDMKGNNSHVLLSA-LKYPANIAVDPVERFIFWSSEVAGSLYRADL 187
Query: 260 DFIDCKSL----EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D ++ ++L E T V+ + ++L+WI G I + DG + I +
Sbjct: 188 DGVEVRALLETSEKITAVSLDVLEKRLFWIQYNREGSNSLICSCDYDGGSVHISKHPTQH 247
Query: 316 EALALDLENGMLYYSTLK 333
A+ L ++YST K
Sbjct: 248 NLFAMSLFGDHIFYSTWK 265
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 10/55 (18%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNECEQ------PGYCSQMCTNTKGSYICSCNEGY 99
A C C G + D C D++ECE P S C NT+G Y+C C+EGY
Sbjct: 853 ATCQCLKG--FAGDGKLCSDIDECEMGVPVCPPA--SSKCINTEGGYVCRCSEGY 903
>gi|6978797|ref|NP_036974.1| pro-epidermal growth factor precursor [Rattus norvegicus]
gi|1352360|sp|P07522.2|EGF_RAT RecName: Full=Pro-epidermal growth factor; Short=EGF; Contains:
RecName: Full=Epidermal growth factor; Flags: Precursor
gi|440237|gb|AAB60436.1| preproepidermal growth factor [Rattus norvegicus]
Length = 1133
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 139/299 (46%), Gaps = 55/299 (18%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C +L C CS+ C T G LC CP G +L D TC +
Sbjct: 383 CPTGFVLLPDGKRCHELVACPGNRSECSHDCILTSDGPLCICPAGSVLGKDGKTCTGCSF 442
Query: 74 CEQPGYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN----RHS--- 125
+ G CSQ+C + S+ C C GY L+ D +C A FL+ +N RH
Sbjct: 443 SDNGG-CSQICLPLSLASWECDCFPGYDLQLDRKSCAASMGPQPFLLFANSQDIRHMHFD 501
Query: 126 ------------------------------------ILVADLEEKGKDHRAQDIVVSGLD 149
I A+L+ ++ R + G+D
Sbjct: 502 GTDYKTLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANLDGSQRERR----ITEGVD 557
Query: 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
EGLA DWIG IYW DS + IE D +G + ++ K++I++PRG+ + P R LF
Sbjct: 558 TPEGLAVDWIGRRIYWTDSGKSVIEGSDLSGKHHQIIIKESISRPRGIAVHPK--ARRLF 615
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
WTD G +PRIE + GS+R+ I S+ + P+G+ +D T +Y+ D+KL I+ L+
Sbjct: 616 WTDTGMSPRIESSSLQGSDRTLIASSNLLEPSGIAIDYLTDTLYWCDTKLSVIEMADLD 674
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 26/217 (11%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST- 277
I + DG++ T++S ++ L D ++YFA + L +I+ +L+ T
Sbjct: 495 IRHMHFDGTDYKTLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANLDGSQRERRITE 554
Query: 278 ------------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
I R++YW D G + I +++ G + I++ + + +
Sbjct: 555 GVDTPEGLAVDWIGRRIYWTDSGKS----VIEGSDLSGKHHQIIIKESISRPRGIAVHPK 610
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
R LFWTD G +PRIE + GS+R+ I S+ + P+G+ +D T +Y+
Sbjct: 611 ---------ARRLFWTDTGMSPRIESSSLQGSDRTLIASSNLLEPSGIAIDYLTDTLYWC 661
Query: 386 DSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
D+KL I+ + DG+ R+++ D+ F+ + D+
Sbjct: 662 DTKLSVIEMADLDGSKRRRLTQNDVGHPFSLAVFEDH 698
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 160/448 (35%), Gaps = 76/448 (16%)
Query: 19 PNGADEGPGCDLAECKHKFGLC-SNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECE-Q 76
P + D CK + G C + P C G LS D C+D+NEC Q
Sbjct: 305 PGTENRAQASDSERCKQRRGQCLYSLSERDPNSDSSACAEGYTLSRDRKYCEDVNECALQ 364
Query: 77 PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD------ 130
C+ C N GSY C+C G+VL D C + + IL +D
Sbjct: 365 NHGCTLGCENIPGSYYCTCPTGFVLLPDGKRCHELVACPGNRSECSHDCILTSDGPLCIC 424
Query: 131 -----LEEKGKDHRAQDIVVSG-----------------------LDLVEGLAYDWIGGH 162
L + GK +G L L +G
Sbjct: 425 PAGSVLGKDGKTCTGCSFSDNGGCSQICLPLSLASWECDCFPGYDLQLDRKSCAASMGPQ 484
Query: 163 IYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT--DWGENPRIE 220
+ L + I +GT+ L + + DP + T W E
Sbjct: 485 PFLLFANSQDIRHMHFDGTDYKTLLSRQMGMVFALDYDPVESKIYFAQTALKWIE----- 539
Query: 221 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN-------- 272
R +DGS R I+ + P GL +D RR+Y+ DS I+ L K +
Sbjct: 540 RANLDGSQRERRITEGVDTPEGLAVDWIGRRIYWTDSGKSVIEGSDLSGKHHQIIIKESI 599
Query: 273 -----VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENG 325
+ R+L+W D G+ +I +++ GS+ +++ S L E +A+D
Sbjct: 600 SRPRGIAVHPKARRLFWTD---TGMSPRIESSSLQGSDRTLIASSNLLEPSGIAIDYLTD 656
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
LY+ K + IE +DGS R + + P +L + V+F+
Sbjct: 657 TLYWCDTKLS------------VIEMADLDGSKRRRLTQNDVGHP--FSLAVFEDHVWFS 702
Query: 386 DSKLDFIDFCNYDGTGRQQVILIDLMVE 413
D + + N TG+ +V L M++
Sbjct: 703 DWAIPSVIRVNKR-TGQNRVRLRGSMLK 729
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 40/207 (19%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
V GLA +WI G I D I V D NG N VL ++ +P +++DP+ R +FW
Sbjct: 119 VSGLAINWIDGEILRTDRWKGVITVTDMNGNNSRVLLS-SLKRPANILVDPT--ERLIFW 175
Query: 211 TD--WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
+ G R + GMD + T + P +++ I LD +D
Sbjct: 176 SSVVTGNLHRADLGGMD-------VKTLLEAPERISVLI-----------LDILD----- 212
Query: 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLY 328
++L+W +G G I + +G + + ++ L + + +
Sbjct: 213 -----------KRLFWAQDGREGSHGYIHSCDYNGGSIHHIRHQARHDLLTMAIFGDKIL 261
Query: 329 YSTLKCTRWLFWTDWGENPRIERIGMD 355
YS LK + ++ D + R+ +D
Sbjct: 262 YSALK-EKAIWIADKHTGKNVVRVNLD 287
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 38 GLCSNTCHPTPLG--ALCTCPPGEILSNDSVTCQDMNECEQPGY----CSQMCTNTKGSY 91
G C + H G A+C C G + D C D++ECE S C NT+G Y
Sbjct: 842 GGCGSHAHCISEGEAAVCQCLKG--FAGDGNLCSDIDECELGSSDCPPTSSRCINTEGGY 899
Query: 92 ICSCNEGY 99
+C C+EGY
Sbjct: 900 VCQCSEGY 907
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 29 DLAECKHKFGLC---SNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQ-- 82
D+ EC+ C S+ C T G +C C G D + C D++EC+Q + CS+
Sbjct: 874 DIDECELGSSDCPPTSSRCINTEGGYVCQCSEG--YEGDGIYCLDVDECQQGSHGCSENA 931
Query: 83 MCTNTKGSYICSC 95
CTNT+G Y C+C
Sbjct: 932 TCTNTEGGYNCTC 944
>gi|395851348|ref|XP_003798223.1| PREDICTED: pro-epidermal growth factor [Otolemur garnettii]
Length = 1134
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 134/307 (43%), Gaps = 61/307 (19%)
Query: 19 PNGADEGPGCDLAECKHKFGLCSN-TCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQP 77
P D + CK + G C+ C P LC C G +S D + C+D+NEC
Sbjct: 304 PKAKDSALESEQKLCKLRKGNCTGGACGRDPQSPLCACAEGYAVSPDGLACEDVNECAFW 363
Query: 78 GY-CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI--------------NHSAAFLIISN 122
+ C+ C NT GSY C+C G+VL D C + FL+ +N
Sbjct: 364 NHGCTLGCENTPGSYYCTCPVGFVLLPDGKRCHGFPGYDLQLDKKSCVASGPQPFLLFAN 423
Query: 123 RHSILVADLEEKGKDHRA-----------------------------------------Q 141
H I + G D+R+ +
Sbjct: 424 SHDI--RHMHFDGTDYRSLLSQQMGMVFALDHDPVENKIYFAHTALKWLERANMDGSQRE 481
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ + + EGLA DWIG YW D + IE D NG +R ++ ++NI+QPRG+ + P
Sbjct: 482 RLIEEAVGVPEGLAVDWIGRRFYWTDRGKSVIEGSDLNGKHREIIIRENISQPRGIAVHP 541
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
+ LFWTD G NPRIE + G R I S + P+G+T+D T ++Y+ D+K
Sbjct: 542 V--AKRLFWTDMGINPRIESSSLQGFGRLVIASADLIEPSGITIDFLTDKLYWCDAKQAV 599
Query: 262 IDCKSLE 268
I+ +L+
Sbjct: 600 IEMANLD 606
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 37/258 (14%)
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEG 153
SC EG N TC A FLI S+ +SI +LE G +H Q V +G ++
Sbjct: 27 SCPEGTQPGNRNSTCAG---PAPFLIFSHGNSIFRINLE--GTNHE-QLAVDAGASVIMD 80
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRWL--- 208
Y+ IYW+D ++ NG+ R+ + N++ GM ++ W+
Sbjct: 81 FHYN--KERIYWVDLERQLLQRVFLNGSRQERVCNIEKNVS---GMAVN------WINEE 129
Query: 209 -FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK---LDFIDC 264
W++ E I M G+N ++S + +P + +D R ++++ + L D
Sbjct: 130 IIWSNQQEG-IITVTDMKGNNSRVLLSA-LKYPANIAVDPVERFMFWSSEQAGSLHRADL 187
Query: 265 KSLEIKTNVNYST---------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
++++T + S + ++L+WI G I + DG + + +
Sbjct: 188 NGMQVRTLLETSQKITAMSLDLLDKRLFWIHYDREGSSSHIYSCDYDGGSVHLSKYQTQH 247
Query: 316 EALALDLENGMLYYSTLK 333
A+ L ++YST K
Sbjct: 248 NMFAMSLFGDRIFYSTWK 265
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 8/54 (14%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNECEQ-----PGYCSQMCTNTKGSYICSCNEGY 99
A C C G + D C D++ECE P SQ C NT G Y+C C+EGY
Sbjct: 787 ATCQCMKG--FAGDGKLCFDIDECELGVPVCPSPSSQ-CVNTNGGYVCQCSEGY 837
>gi|432888040|ref|XP_004075037.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Oryzias latipes]
Length = 2254
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 147/322 (45%), Gaps = 58/322 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFG-LCSNTCHPTPLGALCTCPPGEILS 62
C++ + VC+G T+C + +DEG C C LC C TP G C C G L
Sbjct: 1939 ECLDPSLVCNGLTNCADSSDEGVECSRHNCSSPSSPLCDQRCMSTPRGPRCYCTAGFKLQ 1998
Query: 63 NDSVTCQDMNECEQPGY-CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN--------- 112
+ C D +EC C C NT+GSY C C+ G+ LE DN +CK +
Sbjct: 1999 PGATFCVDADECSSAAAPCKHSCVNTRGSYTCRCHPGFYLEPDNKSCKTKDEPLLLASVQ 2058
Query: 113 --------HSAAFLIIS--NR---------------------HSILVADLEEKGKDHRAQ 141
HS + ++S NR SI AD++ K
Sbjct: 2059 SELLLLGVHSGSLKLLSTANRPVFSVDYDWAQRRVYWLSPTFQSIRWADMKNSNK----- 2113
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT-----NRIVLAKDNITQPRG 196
++ G+ + +A DW+G ++YW++ L +I + + + V+ +++ QP
Sbjct: 2114 GTLIKGVK-SDAIAVDWVGKNLYWVEGLLGQILAVKLSASIVRSQDYTVVLGEDLEQPSS 2172
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ML P G ++ W++ G P+I+R GMDGS R ++S + WP L D+ RVY+AD
Sbjct: 2173 LMLLPFKG--FMLWSEIGSTPQIKRSGMDGSKRKVLVSHNLSWPVSLAYDLLDDRVYWAD 2230
Query: 257 SKLDFIDCKSL---EIKTNVNY 275
KL I SL +IK N +
Sbjct: 2231 EKLHCIGSSSLDGEDIKVNNKH 2252
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 149/334 (44%), Gaps = 62/334 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+CV+ ++CDG+ C +G+DE C C G CS+ C G C CP G LS+
Sbjct: 156 KCVSPEEMCDGQLHCLDGSDEPITCGRI-CSMNNGGCSHVCTDESWGTRCVCPAGYELSS 214
Query: 64 DSVTCQDMNECEQP-GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII-- 120
+ C+D+NEC C+ C NT GSY+C C +G+ L + C A+ ++ L +
Sbjct: 215 NGAVCEDVNECSSALPPCAHYCKNTVGSYLCHCKKGFKLN-EGSICLALGNATRLLTVQR 273
Query: 121 ---------SNRHSILVADLEE---------KGKDH-------------RAQDIVVSGLD 149
S + +I+ + + +G + R V +G
Sbjct: 274 SNLGLLNVKSQQFNIIQTSVSDAVALTYDIARGLHYWADGRGSIYKTIGRQSWAVYTGEP 333
Query: 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
++ LA DW+ G++YW + ++ I + +G+ +L K+ +P G+M F
Sbjct: 334 GIQALACDWLNGYLYWTNLKMESIYMQMPDGSYTTLLNKN--VKPSGLM----------F 381
Query: 210 WTDWGENPR--IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
W + G R IER MDGS+RST+ + LT D+A RR+Y+ ++ +
Sbjct: 382 WINAGPGERVTIERSWMDGSDRSTLTVLTAQSAHSLTADVAARRLYWISDFKRSVETVGV 441
Query: 268 EIKTNVNYSTIFRK------------LYWIDEGG 289
+ +++ +F + LYW+D G
Sbjct: 442 DGTGRYSFTGLFSRRPALSLAVFESMLYWVDSRG 475
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 158/403 (39%), Gaps = 66/403 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPL--GALCTCPPGEI 60
+C+ L+ CDGK DC +G DE C +C H + S C L L C
Sbjct: 1900 KCIPLSWRCDGKEDCHDGTDE-EKCLQRKCPSHLYQCGSGECLDPSLVCNGLTNCADS-- 1956
Query: 61 LSNDSVTCQDMNECEQPG--YCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL 118
S++ V C N C P C Q C +T C C G+ L+ A F
Sbjct: 1957 -SDEGVECSRHN-CSSPSSPLCDQRCMSTPRGPRCYCTAGFKLQ----------PGATFC 2004
Query: 119 IISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDE 178
+ ++ S A + + R +Y ++L+ + DE
Sbjct: 2005 VDADECSSAAAPCKHSCVNTRG--------------SYTCRCHPGFYLEPDNKSCKTKDE 2050
Query: 179 NGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY 238
++LA Q ++L G+ L T N + + D + R ++Y
Sbjct: 2051 P----LLLAS---VQSELLLLGVHSGSLKLLST---ANRPVFSVDYDWAQR------RVY 2094
Query: 239 WPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN-VNYSTIFRKLYWIDEGGNGVPLKIG 297
W L + + +AD K +K++ + + + LYW+ EG G L +
Sbjct: 2095 W-----LSPTFQSIRWADMKNSNKGTLIKGVKSDAIAVDWVGKNLYWV-EGLLGQILAVK 2148
Query: 298 KANMDGSNASILVSGQLYEALALDLEN-GMLYYSTLKCTRWLFWTDWGENPRIERIGMDG 356
+ ASI+ S L DLE L K ++ W++ G P+I+R GMDG
Sbjct: 2149 LS------ASIVRSQDYTVVLGEDLEQPSSLMLLPFK--GFMLWSEIGSTPQIKRSGMDG 2200
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
S R ++S + WP L D+ RVY+AD KL I + DG
Sbjct: 2201 SKRKVLVSHNLSWPVSLAYDLLDDRVYWADEKLHCIGSSSLDG 2243
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 104/249 (41%), Gaps = 50/249 (20%)
Query: 243 LTLDIATRRVYFADSKLDFIDCKSLE---IKTNVNYST-----IFRKLYWIDEGGNGVPL 294
L L ATR + S L ++ KS + I+T+V+ + I R L++ +G +
Sbjct: 260 LALGNATRLLTVQRSNLGLLNVKSQQFNIIQTSVSDAVALTYDIARGLHYWADGRGSIYK 319
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC-------------------- 334
IG+ + ++ +ALA D NG LY++ LK
Sbjct: 320 TIGRQSW-----AVYTGEPGIQALACDWLNGYLYWTNLKMESIYMQMPDGSYTTLLNKNV 374
Query: 335 --TRWLFWTDWGENPR--IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 390
+ +FW + G R IER MDGS+RST+ + LT D+A RR+Y+
Sbjct: 375 KPSGLMFWINAGPGERVTIERSWMDGSDRSTLTVLTAQSAHSLTADVAARRLYWISDFKR 434
Query: 391 FIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKTPL 450
++ DGTGR FT + PAL+L + MLY+ + + P
Sbjct: 435 SVETVGVDGTGR---------YSFTGLF---SRRPALSLAVFESMLYW-VDSRGLWEAPQ 481
Query: 451 FCITRNYFL 459
T+ FL
Sbjct: 482 SKPTKRKFL 490
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 57/129 (44%), Gaps = 21/129 (16%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHP-----TPLGALCTCP-- 56
CV L+ VCDG+ DC +G+DE CD+AE K N P TP A C+ P
Sbjct: 1049 ECVLLSHVCDGEADCQDGSDE-EQCDVAETKAAEKD-LNIPPPIIPSATPTKAACSSPSV 1106
Query: 57 --PGEILSNDSVTCQDMNE-CEQPGYC-----SQMCTNT----KGSYICSCNEGYVLEYD 104
P E L D ++C N+ C+ +C C +T K S + C G L D
Sbjct: 1107 LCPAEFLCKDRLSCVLKNQVCDGRSHCLDGSDELNCPSTAALPKSSNVLKCRLGSTLCRD 1166
Query: 105 NHTCKAINH 113
C ++H
Sbjct: 1167 GTECVLLSH 1175
>gi|149025937|gb|EDL82180.1| epidermal growth factor, isoform CRA_b [Rattus norvegicus]
Length = 1063
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 138/299 (46%), Gaps = 56/299 (18%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C +L C CS+ C T G LC CP G +L D TC
Sbjct: 383 CPTGFVLLPDGKRCHELVACPGNRSECSHDCILTSDGPLCICPAGSVLGKDGKTC---TG 439
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
C P G CSQ+C + S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 440 CSSPDNGGCSQICLPLSLASWECDCFPGYDLQLDRKSCAA-SGPQPFLLFANSQDI--RH 496
Query: 131 LEEKGKDHRA-----------------------------------------QDIVVSGLD 149
+ G D++ + ++ G+D
Sbjct: 497 MHFDGTDYKTLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANLDGSQRERLITEGVD 556
Query: 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
EGLA DWIG IYW DS + IE D +G + ++ K++I++PRG+ + P R LF
Sbjct: 557 TPEGLAVDWIGRRIYWTDSGKSVIEGSDLSGKHHQIIIKESISRPRGIAVHPK--ARRLF 614
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
WTD G +PRIE + GS+R+ I S+ + P+G+ +D T +Y+ D+KL I+ L+
Sbjct: 615 WTDTGMSPRIESSSLQGSDRTLIASSNLLEPSGIAIDYLTDTLYWCDTKLSVIEMADLD 673
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 174/445 (39%), Gaps = 71/445 (15%)
Query: 19 PNGADEGPGCDLAECKHKFGLC-SNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECE-Q 76
P + D CK + G C + P C C G LS D C+D+NEC Q
Sbjct: 305 PGTENRAQASDSERCKQRRGQCLYSLSERDPNSDSCACAEGYTLSRDRKYCEDVNECALQ 364
Query: 77 PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI----------NH-----SAAFLIIS 121
C+ C N GSY C+C G+VL D C + +H S L I
Sbjct: 365 NHGCTLGCENIPGSYYCTCPTGFVLLPDGKRCHELVACPGNRSECSHDCILTSDGPLCIC 424
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
S+L D + + S + L LA W D +L+R + C +G
Sbjct: 425 PAGSVLGKDGKTCTGCSSPDNGGCSQICLPLSLA-SWECDCFPGYDLQLDR-KSCAASGP 482
Query: 182 NRIVLAKDN----------------ITQPRGMM--LDPSPGTRWLFWTDWGENPRIERIG 223
+L ++ +++ GM+ LD P +++ IER
Sbjct: 483 QPFLLFANSQDIRHMHFDGTDYKTLLSRQMGMVFALDYDPVESKIYFAQTALK-WIERAN 541
Query: 224 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN----------- 272
+DGS R +I+ + P GL +D RR+Y+ DS I+ L K +
Sbjct: 542 LDGSQRERLITEGVDTPEGLAVDWIGRRIYWTDSGKSVIEGSDLSGKHHQIIIKESISRP 601
Query: 273 --VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLY 328
+ R+L+W D G+ +I +++ GS+ +++ S L E +A+D LY
Sbjct: 602 RGIAVHPKARRLFWTD---TGMSPRIESSSLQGSDRTLIASSNLLEPSGIAIDYLTDTLY 658
Query: 329 YSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 388
+ K + IE +DGS R + + P +L + V+F+D
Sbjct: 659 WCDTKLS------------VIEMADLDGSKRRRLTQNDVGHP--FSLAVFEDHVWFSDWA 704
Query: 389 LDFIDFCNYDGTGRQQVILIDLMVE 413
+ + N TG+ +V L M++
Sbjct: 705 IPSVIRVNKR-TGQNRVRLRGSMLK 728
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 84/207 (40%), Gaps = 40/207 (19%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
V GLA +WI G I D I V D NG N VL ++ +P +++DP+ R +FW
Sbjct: 119 VSGLAINWIDGEILRTDRWKGVITVTDMNGNNSRVLLS-SLKRPANILVDPT--ERLIFW 175
Query: 211 TD--WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
+ G R + GMD + T + P +++ I LD +D
Sbjct: 176 SSVVTGNLHRADLGGMD-------VKTLLEAPERISVLI-----------LDILD----- 212
Query: 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLY 328
++L+W +G G I + DG + + ++ L + + +
Sbjct: 213 -----------KRLFWAQDGREGSHGYIHSCDYDGGSIHHIRHQARHDLLTMAIFGDKIL 261
Query: 329 YSTLKCTRWLFWTDWGENPRIERIGMD 355
YS LK + ++ D + R+ +D
Sbjct: 262 YSALK-EKAIWIADKHTGKNVVRVNLD 287
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 38 GLCSNTCHPTPLG--ALCTCPPGEILSNDSVTCQDMNECEQPGY----CSQMCTNTKGSY 91
G C + H G A+C C G + D C D++ECE S C NT+G Y
Sbjct: 841 GGCGSHAHCISEGEAAVCQCLKG--FAGDGNLCSDIDECELGSSDCPPTSSRCINTEGGY 898
Query: 92 ICSCNEGY 99
+C C+EGY
Sbjct: 899 VCQCSEGY 906
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 29 DLAECKHKFGLC---SNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQ-- 82
D+ EC+ C S+ C T G +C C G D + C D++EC+Q + CS+
Sbjct: 873 DIDECELGSSDCPPTSSRCINTEGGYVCQCSEG--YEGDGIYCLDVDECQQGSHGCSENA 930
Query: 83 MCTNTKGSYICSC 95
CTNT+G Y C+C
Sbjct: 931 TCTNTEGGYNCTC 943
>gi|38303863|gb|AAH62030.1| Egf protein [Rattus norvegicus]
Length = 1132
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 138/299 (46%), Gaps = 56/299 (18%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C +L C CS+ C T G LC CP G +L D TC
Sbjct: 383 CPTGFVLLPDGKRCHELVACPGNRSECSHDCILTSDGPLCICPAGSVLGKDGKTC---TG 439
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
C P G CSQ+C + S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 440 CSSPDNGGCSQICLPLSLASWECDCFPGYDLQLDRKSCAA-SGPQPFLLFANSQDI--RH 496
Query: 131 LEEKGKDHRA-----------------------------------------QDIVVSGLD 149
+ G D++ + ++ G+D
Sbjct: 497 MHFDGTDYKTLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANLDGSQRERLITEGVD 556
Query: 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
EGLA DWIG IYW DS + IE D +G + ++ K++I++PRG+ + P R LF
Sbjct: 557 TPEGLAVDWIGRRIYWTDSGKSVIEGSDLSGKHHQIIIKESISRPRGIAVHPK--ARRLF 614
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
WTD G +PRIE + GS+R+ I S+ + P+G+ +D T +Y+ D+KL I+ L+
Sbjct: 615 WTDTGMSPRIESSSLQGSDRTLIASSNLLEPSGVAIDYLTDTLYWCDTKLSVIEMADLD 673
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 174/445 (39%), Gaps = 71/445 (15%)
Query: 19 PNGADEGPGCDLAECKHKFGLC-SNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECE-Q 76
P + D CK + G C + P C C G LS D C+D+NEC Q
Sbjct: 305 PGTENRAQASDSERCKQRRGQCLYSLSERDPNSDSCACAEGYTLSRDRKYCEDVNECALQ 364
Query: 77 PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI----------NH-----SAAFLIIS 121
C+ C N GSY C+C G+VL D C + +H S L I
Sbjct: 365 NHGCTLGCENIPGSYYCTCPTGFVLLPDGKRCHELVACPGNRSECSHDCILTSDGPLCIC 424
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
S+L D + + S + L LA W D +L+R + C +G
Sbjct: 425 PAGSVLGKDGKTCTGCSSPDNGGCSQICLPLSLA-SWECDCFPGYDLQLDR-KSCAASGP 482
Query: 182 NRIVLAKDN----------------ITQPRGMM--LDPSPGTRWLFWTDWGENPRIERIG 223
+L ++ +++ GM+ LD P +++ IER
Sbjct: 483 QPFLLFANSQDIRHMHFDGTDYKTLLSRQMGMVFALDYDPVESKIYFAQTALK-WIERAN 541
Query: 224 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN----------- 272
+DGS R +I+ + P GL +D RR+Y+ DS I+ L K +
Sbjct: 542 LDGSQRERLITEGVDTPEGLAVDWIGRRIYWTDSGKSVIEGSDLSGKHHQIIIKESISRP 601
Query: 273 --VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLY 328
+ R+L+W D G+ +I +++ GS+ +++ S L E +A+D LY
Sbjct: 602 RGIAVHPKARRLFWTD---TGMSPRIESSSLQGSDRTLIASSNLLEPSGVAIDYLTDTLY 658
Query: 329 YSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 388
+ K + IE +DGS R + + P +L + V+F+D
Sbjct: 659 WCDTKLS------------VIEMADLDGSKRRRLTQNDVGHP--FSLAVFEDHVWFSDWA 704
Query: 389 LDFIDFCNYDGTGRQQVILIDLMVE 413
+ + N TG+ +V L M++
Sbjct: 705 IPSVIRVNKR-TGQNRVRLRGSMLK 728
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 83/207 (40%), Gaps = 40/207 (19%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
V GLA +WI G I D I V D NG N VL ++ +P +++DP+ R +FW
Sbjct: 119 VSGLAINWIDGEILRTDRWKGVITVTDMNGNNSRVLLS-SLKRPANILVDPT--ERLIFW 175
Query: 211 TD--WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
+ G R + GMD + T + P +++ I LD +D
Sbjct: 176 SSVVTGNLHRADLGGMD-------VKTLLEAPERISVLI-----------LDILD----- 212
Query: 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLY 328
++L+W + G I + DG + + ++ L + + +
Sbjct: 213 -----------KRLFWAQDSREGSHGYIHSCDYDGGSIHHIRHQARHDLLTMAIFGDKIL 261
Query: 329 YSTLKCTRWLFWTDWGENPRIERIGMD 355
YS LK + ++ D + R+ +D
Sbjct: 262 YSALK-EKAIWIADKHTGKNVVRVNLD 287
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 38 GLCSNTCHPTPLG--ALCTCPPGEILSNDSVTCQDMNECEQPGY----CSQMCTNTKGSY 91
G C + H G A+C C G + D C D++ECE S C NT+G Y
Sbjct: 841 GGCGSHAHCISEGEAAVCQCLKG--FAGDGNLCSDIDECELGSSDCPPTSSRCINTEGGY 898
Query: 92 ICSCNEGY 99
+C C+EGY
Sbjct: 899 VCQCSEGY 906
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 29 DLAECKHKFGLC---SNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQ-- 82
D+ EC+ C S+ C T G +C C G D + C D++EC+Q + CS+
Sbjct: 873 DIDECELGSSDCPPTSSRCINTEGGYVCQCSEG--YEGDGIYCLDVDECQQGSHGCSENA 930
Query: 83 MCTNTKGSYICSC 95
CTNT+G Y C+C
Sbjct: 931 TCTNTEGGYNCTC 943
>gi|402586341|gb|EJW80279.1| hypothetical protein WUBG_08812, partial [Wuchereria bancrofti]
Length = 524
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 159/349 (45%), Gaps = 73/349 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++ TK+CDGK DC +G+DE C C G C CH +P G +CTCP G L
Sbjct: 102 HCIHKTKLCDGKNDCLDGSDE-KNCSSNLCP-SLG-CQAGCHSSPSGGVCTCPVGYKLDE 158
Query: 64 D-SVTCQDMNECEQPGYCSQMCTNTKGSYICSC-NEGYVLEY------DNHT----CKAI 111
TC D+NEC + GYC Q C N + + CSC E Y LE DN T C +
Sbjct: 159 RFHRTCSDINECIEWGYCDQGCQNHRPGFTCSCLGECYHLEMMHGPGNDNRTLRGYCLSR 218
Query: 112 NHSAAFLIISNR-------------------------------------------HSILV 128
+ + L I+ R HS
Sbjct: 219 DSNTMRLYIARREGLYRINPNDPNEEAKKLVSGEFIYGIGFDFGDKKMFWTDRLSHSAFS 278
Query: 129 ADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK 188
AD+++ G + + + L LA DW+ H+Y ++S RI++ +G R VL
Sbjct: 279 ADIDDSGDIKNIKKLDLKNLIFPRNLAVDWLTNHLYIVESGSRRIDISTFDGERRTVLIA 338
Query: 189 DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248
D + P + LDP G +F+++ ++E MDG+ R T++ + + +G+ +DIA
Sbjct: 339 DGLVLPLDIALDPIRGE--MFFSN---QFKLESAAMDGTRRRTLVDSHTHQVSGVVVDIA 393
Query: 249 TRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
++RVY+ D K+D ++ +++YS R++ + +G N VP G
Sbjct: 394 SKRVYWVDPKVDRVE--------SIDYSGKDRRI--VIQGMNNVPHPFG 432
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 100/455 (21%), Positives = 173/455 (38%), Gaps = 107/455 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNT-CHPTPLGA----------- 51
+C+ + VCDG +DC + +DE C+ +C C N C P
Sbjct: 22 QCIQKSWVCDGSSDCADSSDEPSTCEFKQCSGSEFQCKNKRCQPRKFRCDYYDDCGDNSD 81
Query: 52 -------LC-----TCPPGEILSNDSVTCQDMNECEQ------------PGY-CSQMCTN 86
LC CP + + C N+C P C C +
Sbjct: 82 EEGCGQYLCPPQQWNCPGSGHCIHKTKLCDGKNDCLDGSDEKNCSSNLCPSLGCQAGCHS 141
Query: 87 TKGSYICSCNEGYVLEYDNH-TCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVV 145
+ +C+C GY L+ H TC IN I ++ ++HR
Sbjct: 142 SPSGGVCTCPVGYKLDERFHRTCSDIN-----------ECIEWGYCDQGCQNHRPGFTCS 190
Query: 146 S-----GLDLVEGLAYD--WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
L+++ G D + G+ DS R+ + G RI P
Sbjct: 191 CLGECYHLEMMHGPGNDNRTLRGYCLSRDSNTMRLYIARREGLYRI--------NPN--- 239
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
DP+ + L ++ I IG D ++ K++W + L+ + + D
Sbjct: 240 -DPNEEAKKLVSGEF-----IYGIGFDFGDK------KMFWTDRLSHSAFSADI---DDS 284
Query: 259 LDFIDCKSLEIKT-----NVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
D + K L++K N+ + LY ++ G +I + DG ++L++
Sbjct: 285 GDIKNIKKLDLKNLIFPRNLAVDWLTNHLYIVESGSR----RIDISTFDGERRTVLIADG 340
Query: 314 LYEAL--ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
L L ALD G +++S ++E MDG+ R T++ + + +
Sbjct: 341 LVLPLDIALDPIRGEMFFSN--------------QFKLESAAMDGTRRRTLVDSHTHQVS 386
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
G+ +DIA++RVY+ D K+D ++ +Y G R+ VI
Sbjct: 387 GVVVDIASKRVYWVDPKVDRVESIDYSGKDRRIVI 421
>gi|431897149|gb|ELK06411.1| Pro-epidermal growth factor [Pteropus alecto]
Length = 991
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 137/282 (48%), Gaps = 48/282 (17%)
Query: 29 DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQP--GYCSQMCTN 86
+L C CS+ C T G +C CP G +L D TC + C P G CSQ+C
Sbjct: 276 ELISCPSNASECSHECVLTSDGPICFCPEGSVLGTDGKTC---SGCSSPDNGGCSQLCIP 332
Query: 87 -TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN----RH----------------- 124
+ S+ C C+ GY L+ D +C A + FL+ +N RH
Sbjct: 333 LSPVSWECGCHPGYDLQLDKKSCAA-SGPQPFLLFANSQDIRHMHFDGTDYGTLLSQQMG 391
Query: 125 SILVAD-----------------LEEKGKD-HRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
++ D +E D + + ++ +D+ EGLA DWI +YW
Sbjct: 392 TVFAIDHDPVENKVYFAHTALKCIERANMDGSQRERLIEEAVDVPEGLAIDWIDRKLYWT 451
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226
D + IE D +G +R V+ +++I+QPRG+ + P + LFWTD G NPRIE + G
Sbjct: 452 DRGKSVIEGSDLSGKHREVIIREDISQPRGIAVHPV--AKRLFWTDMGINPRIESSSLQG 509
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
R I S+++ WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 510 VGRLVIASSELVWPSGITIDFLTDKLYWCDAKQSVIEMANLD 551
>gi|156406727|ref|XP_001641196.1| predicted protein [Nematostella vectensis]
gi|156228334|gb|EDO49133.1| predicted protein [Nematostella vectensis]
Length = 1627
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 195/443 (44%), Gaps = 70/443 (15%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYI 92
C G CS+ C +P G C CP G L D+ TC++ P + + T I
Sbjct: 290 CGLNNGGCSHLCLLSPQGISCACPTGVRLLLDNKTCEN-----GPKHFLLLARRTDLRRI 344
Query: 93 CSCNEGYVLEYDNHT-----CKAINHSAAFLIISNRHSILVAD-----LEEKGKDHRAQD 142
L+ +HT I H A I +D ++ D + +
Sbjct: 345 S-------LDTPDHTDVVLPFVGIKHGIAVDFDPIEEYIYWSDDTLQVIKRAHIDGKGVE 397
Query: 143 IVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
V S + EG+A DWI ++YW D+ ++RIEV NGT+R +L +++ +PR +++DP
Sbjct: 398 TVASVEVQNPEGIAVDWIARNLYWTDTGMDRIEVSRLNGTSRKILISEDLWEPRAIVVDP 457
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G ++WTDWGE+P+IER +DG NR ++++ + WPNGLT+D + ++Y+AD+KLD
Sbjct: 458 GKGH--MYWTDWGEHPKIERADLDGGNRIILVNSSVTWPNGLTIDYSDNKIYWADAKLDK 515
Query: 262 IDC-------KSLEIKTNVNY----STIFRKLYWID---------------EGGNGVPLK 295
I+ + + + +N+ + + + LYW D E + V
Sbjct: 516 IEVMDVDGSNRRVVLDSNIRHVFGLTLLGNYLYWTDWERRNIDSVNKFTGREKRSVVEQL 575
Query: 296 IGKANMDGSNASILVSGQ-------------LYEALAL--DLENGM-LYYSTLKCTRWLF 339
+ N SI LY + NGM L L C
Sbjct: 576 PDLQGLKAINMSITYGSNPCQTNNGGCSHLCLYRPAGVVCGCPNGMELIKDQLTCIVPRA 635
Query: 340 WTDWGENPRIERIGMDG-SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
+ + + I RI +D S I I N L I +R+Y+ D L I+ +
Sbjct: 636 FLLFSGSHDIHRISLDTYSGGKDIPLVGIKEANALDFSIEEKRIYWTDITLKSINRAYLN 695
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
G+ +++I++DL E+ + L D
Sbjct: 696 GSNPEKLIIVDL--EYPDGLAVD 716
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 150/319 (47%), Gaps = 50/319 (15%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRL--NRIEVCDENGTNRIVLAKDNITQPRGMM 198
+D++ GL EGLA DW +YW DS + NRIEV + +G R VL +N+ QPR +
Sbjct: 89 EDVISVGLKRPEGLAVDWCSKKLYWTDSEVETNRIEVSNMDGRFRKVLFWENLGQPRAIA 148
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
+DP+ G ++FWTDWGE P+IER GMDG+ R+ I+S I+WPNGLT+D +R+Y+ D+K
Sbjct: 149 VDPASG--YMFWTDWGEEPKIERAGMDGTQRTVIVSKDIFWPNGLTIDHNDKRIYWTDAK 206
Query: 259 LDFI---DCKSLEIKTNVN--------YSTIFRKLYWIDEGGNGVP---LKIGKANMD-G 303
I D E +T + S KLYW D + K G +
Sbjct: 207 QHHIATTDFNGKEKRTIIRGTLPHPFAVSLYGNKLYWTDWTTKSIHSCNKKTGFGRLKLQ 266
Query: 304 SNASILVSGQLYEALALD-------LENG------MLYYSTLKCT-----RWLFWTDWGE 345
SN + ++E D L NG +L + C R L E
Sbjct: 267 SNVYSPMGIHVFEKARQDPLPKGCGLNNGGCSHLCLLSPQGISCACPTGVRLLLDNKTCE 326
Query: 346 N-PR----------IERIGMDGSNRSTIISTKIYWPNGLTLDI--ATRRVYFADSKLDFI 392
N P+ + RI +D + + ++ + +G+ +D +Y++D L I
Sbjct: 327 NGPKHFLLLARRTDLRRISLDTPDHTDVVLPFVGIKHGIAVDFDPIEEYIYWSDDTLQVI 386
Query: 393 DFCNYDGTGRQQVILIDLM 411
+ DG G + V +++
Sbjct: 387 KRAHIDGKGVETVASVEVQ 405
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 120/246 (48%), Gaps = 49/246 (19%)
Query: 180 GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN-RSTIISTKIY 238
GT + + N+ + LD ++FWTD +I+R + G+N + +IS +
Sbjct: 41 GTPNVTVVVKNLED--AIALDFDYEQNYVFWTDVLLE-KIKRARIFGNNTQEDVISVGLK 97
Query: 239 WPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGK 298
P GL +D ++++Y+ DS E++TN +I
Sbjct: 98 RPEGLAVDWCSKKLYWTDS----------EVETN----------------------RIEV 125
Query: 299 ANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG 356
+NMDG +L L + A+A+D +G ++FWTDWGE P+IER GMDG
Sbjct: 126 SNMDGRFRKVLFWENLGQPRAIAVDPASG-----------YMFWTDWGEEPKIERAGMDG 174
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
+ R+ I+S I+WPNGLT+D +R+Y+ D+K I +++G ++ +I L F
Sbjct: 175 TQRTVIVSKDIFWPNGLTIDHNDKRIYWTDAKQHHIATTDFNGKEKRTIIRGTLPHPFAV 234
Query: 417 DLMGDN 422
L G+
Sbjct: 235 SLYGNK 240
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 118/257 (45%), Gaps = 48/257 (18%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTC------------QDMNECEQPGYC 80
C+ G CS+ C P G +C CP G L D +TC D++ Y
Sbjct: 595 CQTNNGGCSHLCLYRPAGVVCGCPNGMELIKDQLTCIVPRAFLLFSGSHDIHRISLDTY- 653
Query: 81 SQMCTNTKGSYICSCNEGYVLEYD---------NHTCKAINHSAAFLIISNRHSILVADL 131
+ K + E L++ + T K+IN A+L SN +++ DL
Sbjct: 654 ----SGGKDIPLVGIKEANALDFSIEEKRIYWTDITLKSINR--AYLNGSNPEKLIIVDL 707
Query: 132 EEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI 191
E +GLA DWI ++YW DSR ++IEV +G +R L ++
Sbjct: 708 E-----------------YPDGLAVDWIAKNLYWTDSRKHKIEVSRLDGQHRRTLLYKDV 750
Query: 192 TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
+PR + LDP G L+W + G++ I+R MDGSNR+ +IS + P +T+D
Sbjct: 751 WEPRSLTLDPVNGH--LYWANGGQDSSIDRANMDGSNRTKVIS-NVKRPTDITIDYKEGL 807
Query: 252 VYFADSKLDFIDCKSLE 268
+++ADS+ I+C L
Sbjct: 808 LFWADSERKVIECADLH 824
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 121/330 (36%), Gaps = 100/330 (30%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C +C C G L D TC AFL+ S H I L+
Sbjct: 600 GGCSHLCLYRPAGVVCGCPNGMELIKDQLTCIV---PRAFLLFSGSHDIHRISLDTYSG- 655
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
+DI + G+ L + +I + R
Sbjct: 656 --GKDIPLVGIKEANALDF---------------------------------SIEEKR-- 678
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++WTD I R ++GSN +I + +P+GL +D + +Y+ DS
Sbjct: 679 ----------IYWTDITLK-SINRAYLNGSNPEKLIIVDLEYPDGLAVDWIAKNLYWTDS 727
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE- 316
+ KI + +DG + L+ ++E
Sbjct: 728 RKH----------------------------------KIEVSRLDGQHRRTLLYKDVWEP 753
Query: 317 -ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
+L LD NG LY W + G++ I+R MDGSNR+ +IS + P +T+
Sbjct: 754 RSLTLDPVNGHLY-----------WANGGQDSSIDRANMDGSNRTKVIS-NVKRPTDITI 801
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
D +++ADS+ I+ + G R+ V
Sbjct: 802 DYKEGLLFWADSERKVIECADLHGRNRRTV 831
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 126/311 (40%), Gaps = 36/311 (11%)
Query: 33 CKHKFGLCSNTCHPTP-LGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
C G CS+ C P C CP L +D+ TCQ+ + + KG +
Sbjct: 895 CSMNNGGCSHLCLARPNKQKTCACPMHFKLMSDNRTCQE-------PLSFMLYSTVKGIH 947
Query: 92 ICSCNEGYVLEYDN-----HTCKAINH--SAAFLIISNRHSILVADLEEKGKDHRAQDIV 144
+ E H KA+++ S F+ + + E G ++
Sbjct: 948 RFIFDSTDYAEISLPLRKLHDVKAVSYDISTGFVYWIDAVEGTIRRALENGS---LSGVI 1004
Query: 145 VSGLDLVE-GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI-VLAKDNITQPRGMMLDPS 202
V+G D+ LA D G ++W D+ N I V + V+A PR ++L P
Sbjct: 1005 VAGPDVEPYDLAIDPYGQQMFWTDAVRNEINVFSLKKMAPLGVVASAKDEMPRSIVLFPE 1064
Query: 203 PGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS---K 258
G +FWTD G+N P+I R MDGS I+S P GL +D ++Y+ D+ K
Sbjct: 1065 KGL--MFWTDVGKNGPKILRASMDGSFPQPIVSNIPRSPVGLAVDTDRDKLYWTDTAHKK 1122
Query: 259 LDFIDCKSLE--------IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
++F D + + + T + + +YWID LK + + +I
Sbjct: 1123 IEFSDLQGAKRTVLVDTNLLTPIGLAIHGDFVYWIDSRARV--LKRVRREVGSDEQTIQA 1180
Query: 311 SGQLYEALALD 321
+ + +ALD
Sbjct: 1181 EIDVTDLVALD 1191
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 69/346 (19%), Positives = 120/346 (34%), Gaps = 95/346 (27%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C C+C + L DN TC+ + + H +
Sbjct: 900 GGCSHLCLARPNKQKTCACPMHFKLMSDNRTCQEPLSFMLYSTVKGIHRFIF-----DST 954
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
D+ + + L V+ ++YD G +YW
Sbjct: 955 DYAEISLPLRKLHDVKAVSYDISTGFVYW------------------------------- 983
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+D GT I R +GS I++ P L +D +++++ D
Sbjct: 984 --IDAVEGT-------------IRRALENGSLSGVIVAGPDVEPYDLAIDPYGQQMFWTD 1028
Query: 257 SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE 316
+ + I+ SL+ PL + + D ++
Sbjct: 1029 AVRNEINVFSLK---------------------KMAPLGVVASAKD----------EMPR 1057
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTL 375
++ L E G++ FWTD G+N P+I R MDGS I+S P GL +
Sbjct: 1058 SIVLFPEKGLM-----------FWTDVGKNGPKILRASMDGSFPQPIVSNIPRSPVGLAV 1106
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
D ++Y+ D+ I+F + G R ++ +L+ + GD
Sbjct: 1107 DTDRDKLYWTDTAHKKIEFSDLQGAKRTVLVDTNLLTPIGLAIHGD 1152
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 129 ADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK 188
+ ++ D + V+S + + D+ G ++W DS IE D +G NR +A+
Sbjct: 774 SSIDRANMDGSNRTKVISNVKRPTDITIDYKEGLLFWADSERKVIECADLHGRNRRTVAQ 833
Query: 189 DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIG-MDGSNRSTIISTKIY 238
LD +++WTDW E IER G NR+ I S Y
Sbjct: 834 ATKPFALTQYLD------YIYWTDW-ETESIERANKTTGLNRTRIRSRVDY 877
>gi|417405791|gb|JAA49595.1| Putative pro-epidermal growth factor precursor [Desmodus rotundus]
Length = 1079
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 135/300 (45%), Gaps = 61/300 (20%)
Query: 10 KVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ 69
K C CPN A E CS+ C T G LC CP G +L D TC
Sbjct: 388 KRCHQLISCPNNASE---------------CSHGCVLTSDGPLCFCPEGSVLETDGKTCS 432
Query: 70 DMNECEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN---R 123
C P G CSQ+C + S+ C C GY L+ D +C A L ++ R
Sbjct: 433 G---CSSPDNGGCSQLCLALSPVSWECGCLPGYDLQLDRKSCAASGPQPLLLFANSQDIR 489
Query: 124 H-----------------SILVAD-----------------LEEKGKD-HRAQDIVVSGL 148
H ++ D +E D + + ++ +
Sbjct: 490 HMHFDGTDYVTLLSQQMGAVFALDHDPVENKVYFAHTALKWIERANMDGSQRERLIEEAV 549
Query: 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
D+ EGLA DWI +YW D + IE D NG +R V+ K++I+QPRG+ + P + L
Sbjct: 550 DVPEGLAVDWIARKLYWTDGGKSVIEGSDLNGKHREVIIKEDISQPRGIAVHPM--AKRL 607
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
FWTD G NPRIE + G R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 608 FWTDMGINPRIESSSLRGIGRLVIASSGLVWPSGITIDFLTDKLYWCDAKQSVIEMANLD 667
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 178/423 (42%), Gaps = 69/423 (16%)
Query: 29 DLAECKHKFGLC-SNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTN 86
D C + G C + C P LCTC G LS D C+D+NEC + C+ C N
Sbjct: 309 DQKLCTLRRGNCRGSVCGRDPKSHLCTCAEGYALSKDGKYCEDVNECAFWNHGCTLGCEN 368
Query: 87 TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD-----------LEEKG 135
GSY C+C G+VL D C + + +L +D LE G
Sbjct: 369 IAGSYYCTCPLGFVLLPDGKRCHQLISCPNNASECSHGCVLTSDGPLCFCPEGSVLETDG 428
Query: 136 KDHRAQDIVVSG--LDLVEGLA-YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
K +G L L+ W G + D +L+R + C +G ++L
Sbjct: 429 KTCSGCSSPDNGGCSQLCLALSPVSWECGCLPGYDLQLDR-KSCAASGPQPLLL------ 481
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
+ + I + DG++ T++S ++ L D +V
Sbjct: 482 --------------------FANSQDIRHMHFDGTDYVTLLSQQMGAVFALDHDPVENKV 521
Query: 253 YFADSKLDFIDC-------------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKA 299
YFA + L +I+ +++++ + I RKLYW D GG V I +
Sbjct: 522 YFAHTALKWIERANMDGSQRERLIEEAVDVPEGLAVDWIARKLYWTD-GGKSV---IEGS 577
Query: 300 NMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNR 359
+++G + +++ + + + + + LFWTD G NPRIE + G R
Sbjct: 578 DLNGKHREVIIKEDISQPRGIAVH---------PMAKRLFWTDMGINPRIESSSLRGIGR 628
Query: 360 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLM 419
I S+ + WP+G+T+D T ++Y+ D+K I+ N DG+ RQ+++ D+ F +
Sbjct: 629 LVIASSGLVWPSGITIDFLTDKLYWCDAKQSVIEMANLDGSKRQRLVQNDVGRPFAVAVF 688
Query: 420 GDN 422
D+
Sbjct: 689 EDH 691
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 110/262 (41%), Gaps = 37/262 (14%)
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
A FLI S+ +SI DLE D D VS + + + + IYW+D ++
Sbjct: 41 APFLIFSHGNSIFRIDLEGTNHDKLVTDAGVSVI-----MDFHYSKERIYWVDLEKQLLQ 95
Query: 175 VCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRW----LFWTDWGENPRIERIGMDGSN 228
NGT ++ + N++ GM ++ W L W++ E I M G+N
Sbjct: 96 RVFLNGTRQEKVCNIEKNVS---GMAIN------WINEELIWSNQQEG-IITVTDMKGNN 145
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADS---KLDFIDCKSLEIK---------TNVNYS 276
++ST + +P + +D R V+++ L D E+K T ++
Sbjct: 146 SHVLLST-LKYPANVAVDPVERFVFWSSEVAGSLHRADLNGAEVKILLETSEKITAMSLD 204
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYST-LKCT 335
+ ++L+WI G +I + +G + + A+ L ++YST K T
Sbjct: 205 VLDKRLFWIQYNREGSISRICSCDYNGGSVHFSKHLTQHNLFAMSLFGDRIFYSTWRKKT 264
Query: 336 RWLFWTDWGENPRIERIGMDGS 357
W+ G++ + RI ++ S
Sbjct: 265 IWIANKHTGKD--MVRINLNSS 284
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 13/69 (18%)
Query: 44 CHPTPLGALCTC-PPGEI--------LSNDSVTCQDMNECEQPG----YCSQMCTNTKGS 90
C P GA C P GE+ + D C D++EC+ + S C NT+G
Sbjct: 830 CGPMGCGAHSQCVPEGEVATCQCLRGFAGDGRVCSDVDECDMGTAACPHPSSECINTEGG 889
Query: 91 YICSCNEGY 99
Y+C C+EGY
Sbjct: 890 YVCRCSEGY 898
>gi|432114802|gb|ELK36546.1| Pro-epidermal growth factor [Myotis davidii]
Length = 1838
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 130/291 (44%), Gaps = 46/291 (15%)
Query: 19 PNGADEGPGCDLAECKHKFGLC-SNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC-EQ 76
P + D CK + G C + C P P LC C G LS D C+++ C
Sbjct: 1092 PKAEPDAGMSDQKLCKLRKGNCRGSVCGPAPKPYLCACAEGYALSRDGKRCEELISCPSN 1151
Query: 77 PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN----RH-------- 124
CS C T IC C EG VLE D TC FL+ +N RH
Sbjct: 1152 ASECSHDCVLTSDGPICFCPEGSVLEPDGKTCSG---PQPFLLFANSQDIRHMHFDGTDY 1208
Query: 125 ---------SILVAD-----------------LEEKGKD-HRAQDIVVSGLDLVEGLAYD 157
++ D +E D + + ++ +D EGLA D
Sbjct: 1209 GTLLSQQMGAVFALDHDPVENKVYFAHTVLKWIERANMDGSQRERLIEEAIDAPEGLAID 1268
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP 217
WI +YW D + IE D +G +R +L K+++ QPRG+ + P + LFWTD G NP
Sbjct: 1269 WINRKLYWTDRGKSVIEGSDLSGKHREILIKEDVFQPRGIAVHPM--AKRLFWTDMGINP 1326
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
RIE + G R I S+++ WP+G+T+D T +Y+ D+K I+ +L+
Sbjct: 1327 RIESSSLQGDGRLVIASSELVWPSGITIDFLTDTLYWCDAKQSVIEMANLD 1377
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 37/262 (14%)
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
A FLI S+ +SI DLE G +H + + +G+ ++ Y+ IYWLD ++
Sbjct: 833 APFLIFSHGNSIFRIDLE--GTNHE-KLVTDAGVSVIMDFHYN--KERIYWLDPERQLLQ 887
Query: 175 VCDENGTN--RIVLAKDNITQPRGMMLDPSPGTRW----LFWTDWGENPRIERIGMDGSN 228
NGT R+ + N++ GM ++ W L W++ E I M G+N
Sbjct: 888 RVFLNGTRQERVCTIEKNVS---GMAIN------WIKEELIWSNQQEG-IITVTDMKGNN 937
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADS---KLDFIDCKSLEIK---------TNVNYS 276
++ST + +P + +D R ++++ L D K +E+K T ++
Sbjct: 938 PRVLLST-LNYPANVAVDPVERFIFWSSEVAGSLHRADLKGVEVKILFETSEKITAMSLD 996
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYST-LKCT 335
+ ++L+WI G ++ + DG + + A+ + L+YST K T
Sbjct: 997 VLDKRLFWIQYNREGSNSRVCSCDYDGGSVHFSKHLARHNLFAISVFGDRLFYSTWRKKT 1056
Query: 336 RWLFWTDWGENPRIERIGMDGS 357
W+ G + + RI ++ S
Sbjct: 1057 IWIANKHTGRD--MVRINLNSS 1076
>gi|149025936|gb|EDL82179.1| epidermal growth factor, isoform CRA_a [Rattus norvegicus]
Length = 984
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 138/299 (46%), Gaps = 56/299 (18%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C +L C CS+ C T G LC CP G +L D TC
Sbjct: 304 CPTGFVLLPDGKRCHELVACPGNRSECSHDCILTSDGPLCICPAGSVLGKDGKTC---TG 360
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
C P G CSQ+C + S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 361 CSSPDNGGCSQICLPLSLASWECDCFPGYDLQLDRKSCAA-SGPQPFLLFANSQDI--RH 417
Query: 131 LEEKGKDHRA-----------------------------------------QDIVVSGLD 149
+ G D++ + ++ G+D
Sbjct: 418 MHFDGTDYKTLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANLDGSQRERLITEGVD 477
Query: 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
EGLA DWIG IYW DS + IE D +G + ++ K++I++PRG+ + P R LF
Sbjct: 478 TPEGLAVDWIGRRIYWTDSGKSVIEGSDLSGKHHQIIIKESISRPRGIAVHPK--ARRLF 535
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
WTD G +PRIE + GS+R+ I S+ + P+G+ +D T +Y+ D+KL I+ L+
Sbjct: 536 WTDTGMSPRIESSSLQGSDRTLIASSNLLEPSGIAIDYLTDTLYWCDTKLSVIEMADLD 594
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 26/217 (11%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST- 277
I + DG++ T++S ++ L D ++YFA + L +I+ +L+ T
Sbjct: 415 IRHMHFDGTDYKTLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANLDGSQRERLITE 474
Query: 278 ------------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
I R++YW D G + I +++ G + I++ + + +
Sbjct: 475 GVDTPEGLAVDWIGRRIYWTDSGKS----VIEGSDLSGKHHQIIIKESISRPRGIAVHPK 530
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
R LFWTD G +PRIE + GS+R+ I S+ + P+G+ +D T +Y+
Sbjct: 531 ---------ARRLFWTDTGMSPRIESSSLQGSDRTLIASSNLLEPSGIAIDYLTDTLYWC 581
Query: 386 DSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
D+KL I+ + DG+ R+++ D+ F+ + D+
Sbjct: 582 DTKLSVIEMADLDGSKRRRLTQNDVGHPFSLAVFEDH 618
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 174/445 (39%), Gaps = 71/445 (15%)
Query: 19 PNGADEGPGCDLAECKHKFGLC-SNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECE-Q 76
P + D CK + G C + P C C G LS D C+D+NEC Q
Sbjct: 226 PGTENRAQASDSERCKQRRGQCLYSLSERDPNSDSCACAEGYTLSRDRKYCEDVNECALQ 285
Query: 77 PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI----------NH-----SAAFLIIS 121
C+ C N GSY C+C G+VL D C + +H S L I
Sbjct: 286 NHGCTLGCENIPGSYYCTCPTGFVLLPDGKRCHELVACPGNRSECSHDCILTSDGPLCIC 345
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
S+L D + + S + L LA W D +L+R + C +G
Sbjct: 346 PAGSVLGKDGKTCTGCSSPDNGGCSQICLPLSLA-SWECDCFPGYDLQLDR-KSCAASGP 403
Query: 182 NRIVLAKDN----------------ITQPRGMM--LDPSPGTRWLFWTDWGENPRIERIG 223
+L ++ +++ GM+ LD P +++ IER
Sbjct: 404 QPFLLFANSQDIRHMHFDGTDYKTLLSRQMGMVFALDYDPVESKIYFAQTALK-WIERAN 462
Query: 224 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN----------- 272
+DGS R +I+ + P GL +D RR+Y+ DS I+ L K +
Sbjct: 463 LDGSQRERLITEGVDTPEGLAVDWIGRRIYWTDSGKSVIEGSDLSGKHHQIIIKESISRP 522
Query: 273 --VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLY 328
+ R+L+W D G+ +I +++ GS+ +++ S L E +A+D LY
Sbjct: 523 RGIAVHPKARRLFWTD---TGMSPRIESSSLQGSDRTLIASSNLLEPSGIAIDYLTDTLY 579
Query: 329 YSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 388
+ K + IE +DGS R + + P +L + V+F+D
Sbjct: 580 WCDTKLS------------VIEMADLDGSKRRRLTQNDVGHP--FSLAVFEDHVWFSDWA 625
Query: 389 LDFIDFCNYDGTGRQQVILIDLMVE 413
+ + N TG+ +V L M++
Sbjct: 626 IPSVIRVNKR-TGQNRVRLRGSMLK 649
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 84/207 (40%), Gaps = 40/207 (19%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
V GLA +WI G I D I V D NG N VL ++ +P +++DP+ R +FW
Sbjct: 40 VSGLAINWIDGEILRTDRWKGVITVTDMNGNNSRVLLS-SLKRPANILVDPT--ERLIFW 96
Query: 211 TD--WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
+ G R + GMD + T + P +++ I LD +D
Sbjct: 97 SSVVTGNLHRADLGGMD-------VKTLLEAPERISVLI-----------LDILD----- 133
Query: 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLY 328
++L+W +G G I + DG + + ++ L + + +
Sbjct: 134 -----------KRLFWAQDGREGSHGYIHSCDYDGGSIHHIRHQARHDLLTMAIFGDKIL 182
Query: 329 YSTLKCTRWLFWTDWGENPRIERIGMD 355
YS LK + ++ D + R+ +D
Sbjct: 183 YSALK-EKAIWIADKHTGKNVVRVNLD 208
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 29 DLAECKHKFGLC---SNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQ-- 82
D+ EC+ C S+ C T G +C C G D + C D++EC+Q + CS+
Sbjct: 794 DIDECELGSSDCPPTSSRCINTEGGYVCQCSEG--YEGDGIYCLDVDECQQGSHGCSENA 851
Query: 83 MCTNTKGSYICSC 95
CTNT+G Y C+C
Sbjct: 852 TCTNTEGGYNCTC 864
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 38 GLCSNTCHPTPLG--ALCTCPPGEILSNDSVTCQDMNECEQPGY----CSQMCTNTKGSY 91
G C + H G A+C C G + D C D++ECE S C NT+G Y
Sbjct: 762 GGCGSHAHCISEGEAAVCQCLKG--FAGDGNLCSDIDECELGSSDCPPTSSRCINTEGGY 819
Query: 92 ICSCNEGY 99
+C C+EGY
Sbjct: 820 VCQCSEGY 827
>gi|417405961|gb|JAA49666.1| Putative pro-epidermal growth factor precursor [Desmodus rotundus]
Length = 1136
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 135/300 (45%), Gaps = 61/300 (20%)
Query: 10 KVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ 69
K C CPN A E CS+ C T G LC CP G +L D TC
Sbjct: 388 KRCHQLISCPNNASE---------------CSHGCVLTSDGPLCFCPEGSVLETDGKTCS 432
Query: 70 DMNECEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN---R 123
C P G CSQ+C + S+ C C GY L+ D +C A L ++ R
Sbjct: 433 G---CSSPDNGGCSQLCLALSPVSWECGCLPGYDLQLDRKSCAASGPQPLLLFANSQDIR 489
Query: 124 H-----------------SILVAD-----------------LEEKGKD-HRAQDIVVSGL 148
H ++ D +E D + + ++ +
Sbjct: 490 HMHFDGTDYVTLLSQQMGAVFALDHDPVENKVYFAHTALKWIERANMDGSQRERLIEEAV 549
Query: 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
D+ EGLA DWI +YW D + IE D NG +R V+ K++I+QPRG+ + P + L
Sbjct: 550 DVPEGLAVDWIARKLYWTDGGKSVIEGSDLNGKHREVIIKEDISQPRGIAVHPM--AKRL 607
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
FWTD G NPRIE + G R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 608 FWTDMGINPRIESSSLRGIGRLVIASSGLVWPSGITIDFLTDKLYWCDAKQSVIEMANLD 667
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 178/423 (42%), Gaps = 69/423 (16%)
Query: 29 DLAECKHKFGLCSNT-CHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTN 86
D C + G C + C P LCTC G LS D C+D+NEC + C+ C N
Sbjct: 309 DQKLCTLRRGNCRGSVCGRDPKSHLCTCAEGYALSKDGKYCEDVNECAFWNHGCTLGCEN 368
Query: 87 TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD-----------LEEKG 135
GSY C+C G+VL D C + + +L +D LE G
Sbjct: 369 IAGSYYCTCPLGFVLLPDGKRCHQLISCPNNASECSHGCVLTSDGPLCFCPEGSVLETDG 428
Query: 136 KDHRAQDIVVSG--LDLVEGLA-YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
K +G L L+ W G + D +L+R + C +G ++L
Sbjct: 429 KTCSGCSSPDNGGCSQLCLALSPVSWECGCLPGYDLQLDR-KSCAASGPQPLLL------ 481
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
+ + I + DG++ T++S ++ L D +V
Sbjct: 482 --------------------FANSQDIRHMHFDGTDYVTLLSQQMGAVFALDHDPVENKV 521
Query: 253 YFADSKLDFIDC-------------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKA 299
YFA + L +I+ +++++ + I RKLYW D GG V I +
Sbjct: 522 YFAHTALKWIERANMDGSQRERLIEEAVDVPEGLAVDWIARKLYWTD-GGKSV---IEGS 577
Query: 300 NMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNR 359
+++G + +++ + + + + + LFWTD G NPRIE + G R
Sbjct: 578 DLNGKHREVIIKEDISQPRGIAVH---------PMAKRLFWTDMGINPRIESSSLRGIGR 628
Query: 360 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLM 419
I S+ + WP+G+T+D T ++Y+ D+K I+ N DG+ RQ+++ D+ F +
Sbjct: 629 LVIASSGLVWPSGITIDFLTDKLYWCDAKQSVIEMANLDGSKRQRLVQNDVGRPFAVAVF 688
Query: 420 GDN 422
D+
Sbjct: 689 EDH 691
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 110/262 (41%), Gaps = 37/262 (14%)
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
A FLI S+ +SI DLE D D VS + + + + IYW+D ++
Sbjct: 41 APFLIFSHGNSIFRIDLEGTNHDKLVTDAGVSVI-----MDFHYSKERIYWVDLEKQLLQ 95
Query: 175 VCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRW----LFWTDWGENPRIERIGMDGSN 228
NGT ++ + N++ GM ++ W L W++ E I M G+N
Sbjct: 96 RVFLNGTRQEKVCNIEKNVS---GMAIN------WINEELIWSNQQEG-IITVTDMKGNN 145
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADS---KLDFIDCKSLEIK---------TNVNYS 276
++ST + +P + +D R V+++ L D E+K T ++
Sbjct: 146 SHVLLST-LKYPANVAVDPVERFVFWSSEVAGSLHRADLNGAEVKILLETSEKITAMSLD 204
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYST-LKCT 335
+ ++L+WI G +I + +G + + A+ L ++YST K T
Sbjct: 205 VLDKRLFWIQYNREGSISRICSCDYNGGSVHFSKHLTQHNLFAMSLFGDRIFYSTWRKKT 264
Query: 336 RWLFWTDWGENPRIERIGMDGS 357
W+ G++ + RI ++ S
Sbjct: 265 IWIANKHTGKD--MVRINLNSS 284
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 13/69 (18%)
Query: 44 CHPTPLGALCTC-PPGEI--------LSNDSVTCQDMNECEQPG----YCSQMCTNTKGS 90
C P GA C P GE+ + D C D++EC+ + S C NT+G
Sbjct: 830 CGPMGCGAHSQCVPEGEVATCQCLRGFAGDGRVCSDVDECDMGTAACPHPSSECINTEGG 889
Query: 91 YICSCNEGY 99
Y+C C+EGY
Sbjct: 890 YVCRCSEGY 898
>gi|417405723|gb|JAA49565.1| Putative pro-epidermal growth factor precursor [Desmodus rotundus]
Length = 1057
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 135/300 (45%), Gaps = 61/300 (20%)
Query: 10 KVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ 69
K C CPN A E CS+ C T G LC CP G +L D TC
Sbjct: 388 KRCHQLISCPNNASE---------------CSHGCVLTSDGPLCFCPEGSVLETDGKTCS 432
Query: 70 DMNECEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN---R 123
C P G CSQ+C + S+ C C GY L+ D +C A L ++ R
Sbjct: 433 G---CSSPDNGGCSQLCLALSPVSWECGCLPGYDLQLDRKSCAASGPQPLLLFANSQDIR 489
Query: 124 H-----------------SILVAD-----------------LEEKGKD-HRAQDIVVSGL 148
H ++ D +E D + + ++ +
Sbjct: 490 HMHFDGTDYVTLLSQQMGAVFALDHDPVENKVYFAHTALKWIERANMDGSQRERLIEEAV 549
Query: 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
D+ EGLA DWI +YW D + IE D NG +R V+ K++I+QPRG+ + P + L
Sbjct: 550 DVPEGLAVDWIARKLYWTDGGKSVIEGSDLNGKHREVIIKEDISQPRGIAVHPM--AKRL 607
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
FWTD G NPRIE + G R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 608 FWTDMGINPRIESSSLRGIGRLVIASSGLVWPSGITIDFLTDKLYWCDAKQSVIEMANLD 667
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 178/423 (42%), Gaps = 69/423 (16%)
Query: 29 DLAECKHKFGLC-SNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTN 86
D C + G C + C P LCTC G LS D C+D+NEC + C+ C N
Sbjct: 309 DQKLCTLRRGNCRGSVCGRDPKSHLCTCAEGYALSKDGKYCEDVNECAFWNHGCTLGCEN 368
Query: 87 TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD-----------LEEKG 135
GSY C+C G+VL D C + + +L +D LE G
Sbjct: 369 IAGSYYCTCPLGFVLLPDGKRCHQLISCPNNASECSHGCVLTSDGPLCFCPEGSVLETDG 428
Query: 136 KDHRAQDIVVSG--LDLVEGLA-YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
K +G L L+ W G + D +L+R + C +G ++L
Sbjct: 429 KTCSGCSSPDNGGCSQLCLALSPVSWECGCLPGYDLQLDR-KSCAASGPQPLLL------ 481
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
+ + I + DG++ T++S ++ L D +V
Sbjct: 482 --------------------FANSQDIRHMHFDGTDYVTLLSQQMGAVFALDHDPVENKV 521
Query: 253 YFADSKLDFIDC-------------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKA 299
YFA + L +I+ +++++ + I RKLYW D GG V I +
Sbjct: 522 YFAHTALKWIERANMDGSQRERLIEEAVDVPEGLAVDWIARKLYWTD-GGKSV---IEGS 577
Query: 300 NMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNR 359
+++G + +++ + + + + + LFWTD G NPRIE + G R
Sbjct: 578 DLNGKHREVIIKEDISQPRGIAVH---------PMAKRLFWTDMGINPRIESSSLRGIGR 628
Query: 360 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLM 419
I S+ + WP+G+T+D T ++Y+ D+K I+ N DG+ RQ+++ D+ F +
Sbjct: 629 LVIASSGLVWPSGITIDFLTDKLYWCDAKQSVIEMANLDGSKRQRLVQNDVGRPFAVAVF 688
Query: 420 GDN 422
D+
Sbjct: 689 EDH 691
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 110/262 (41%), Gaps = 37/262 (14%)
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
A FLI S+ +SI DLE D D VS + + + + IYW+D ++
Sbjct: 41 APFLIFSHGNSIFRIDLEGTNHDKLVTDAGVSVI-----MDFHYSKERIYWVDLEKQLLQ 95
Query: 175 VCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRW----LFWTDWGENPRIERIGMDGSN 228
NGT ++ + N++ GM ++ W L W++ E I M G+N
Sbjct: 96 RVFLNGTRQEKVCNIEKNVS---GMAIN------WINEELIWSNQQEG-IITVTDMKGNN 145
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADS---KLDFIDCKSLEIK---------TNVNYS 276
++ST + +P + +D R V+++ L D E+K T ++
Sbjct: 146 SHVLLST-LKYPANVAVDPVERFVFWSSEVAGSLHRADLNGAEVKILLETSEKITAMSLD 204
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYST-LKCT 335
+ ++L+WI G +I + +G + + A+ L ++YST K T
Sbjct: 205 VLDKRLFWIQYNREGSISRICSCDYNGGSVHFSKHLTQHNLFAMSLFGDRIFYSTWRKKT 264
Query: 336 RWLFWTDWGENPRIERIGMDGS 357
W+ G++ + RI ++ S
Sbjct: 265 IWIANKHTGKD--MVRINLNSS 284
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 13/69 (18%)
Query: 44 CHPTPLGALCTC-PPGEI--------LSNDSVTCQDMNECEQPG----YCSQMCTNTKGS 90
C P GA C P GE+ + D C D++EC+ + S C NT+G
Sbjct: 808 CGPMGCGAHSQCVPEGEVATCQCLRGFAGDGRVCSDVDECDMGTAACPHPSSECINTEGG 867
Query: 91 YICSCNEGY 99
Y+C C+EGY
Sbjct: 868 YVCRCSEGY 876
>gi|417413449|gb|JAA53052.1| Putative pro-epidermal growth factor precursor, partial [Desmodus
rotundus]
Length = 1077
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 135/300 (45%), Gaps = 61/300 (20%)
Query: 10 KVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ 69
K C CPN A E CS+ C T G LC CP G +L D TC
Sbjct: 351 KRCHQLISCPNNASE---------------CSHGCVLTSDGPLCFCPEGSVLETDGKTCS 395
Query: 70 DMNECEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN---R 123
C P G CSQ+C + S+ C C GY L+ D +C A L ++ R
Sbjct: 396 G---CSSPDNGGCSQLCLALSPVSWECGCLPGYDLQLDRKSCAASGPQPLLLFANSQDIR 452
Query: 124 H-----------------SILVAD-----------------LEEKGKD-HRAQDIVVSGL 148
H ++ D +E D + + ++ +
Sbjct: 453 HMHFDGTDYVTLLSQQMGAVFALDHDPVENKVYFAHTALKWIERANMDGSQRERLIEEAV 512
Query: 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
D+ EGLA DWI +YW D + IE D NG +R V+ K++I+QPRG+ + P + L
Sbjct: 513 DVPEGLAVDWIARKLYWTDGGKSVIEGSDLNGKHREVIIKEDISQPRGIAVHPM--AKRL 570
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
FWTD G NPRIE + G R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 571 FWTDMGINPRIESSSLRGIGRLVIASSGLVWPSGITIDFLTDKLYWCDAKQSVIEMANLD 630
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 178/423 (42%), Gaps = 69/423 (16%)
Query: 29 DLAECKHKFGLCSNT-CHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTN 86
D C + G C + C P LCTC G LS D C+D+NEC + C+ C N
Sbjct: 272 DQKLCTLRRGNCRGSVCGRDPKSHLCTCAEGYALSKDGKYCEDVNECAFWNHGCTLGCEN 331
Query: 87 TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD-----------LEEKG 135
GSY C+C G+VL D C + + +L +D LE G
Sbjct: 332 IAGSYYCTCPLGFVLLPDGKRCHQLISCPNNASECSHGCVLTSDGPLCFCPEGSVLETDG 391
Query: 136 KDHRAQDIVVSG--LDLVEGLA-YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
K +G L L+ W G + D +L+R + C +G ++L
Sbjct: 392 KTCSGCSSPDNGGCSQLCLALSPVSWECGCLPGYDLQLDR-KSCAASGPQPLLL------ 444
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
+ + I + DG++ T++S ++ L D +V
Sbjct: 445 --------------------FANSQDIRHMHFDGTDYVTLLSQQMGAVFALDHDPVENKV 484
Query: 253 YFADSKLDFIDC-------------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKA 299
YFA + L +I+ +++++ + I RKLYW D GG V I +
Sbjct: 485 YFAHTALKWIERANMDGSQRERLIEEAVDVPEGLAVDWIARKLYWTD-GGKSV---IEGS 540
Query: 300 NMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNR 359
+++G + +++ + + + + + LFWTD G NPRIE + G R
Sbjct: 541 DLNGKHREVIIKEDISQPRGIAVH---------PMAKRLFWTDMGINPRIESSSLRGIGR 591
Query: 360 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLM 419
I S+ + WP+G+T+D T ++Y+ D+K I+ N DG+ RQ+++ D+ F +
Sbjct: 592 LVIASSGLVWPSGITIDFLTDKLYWCDAKQSVIEMANLDGSKRQRLVQNDVGRPFAVAVF 651
Query: 420 GDN 422
D+
Sbjct: 652 EDH 654
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 110/262 (41%), Gaps = 37/262 (14%)
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
A FLI S+ +SI DLE D D VS + + + + IYW+D ++
Sbjct: 4 APFLIFSHGNSIFRIDLEGTNHDKLVTDAGVSVI-----MDFHYSKERIYWVDLEKQLLQ 58
Query: 175 VCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRW----LFWTDWGENPRIERIGMDGSN 228
NGT ++ + N++ GM ++ W L W++ E I M G+N
Sbjct: 59 RVFLNGTRQEKVCNIEKNVS---GMAIN------WINEELIWSNQQEGI-ITVTDMKGNN 108
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADS---KLDFIDCKSLEIK---------TNVNYS 276
++ST + +P + +D R V+++ L D E+K T ++
Sbjct: 109 SHVLLST-LKYPANVAVDPVERFVFWSSEVAGSLHRADLNGAEVKILLETSEKITAMSLD 167
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYST-LKCT 335
+ ++L+WI G +I + +G + + A+ L ++YST K T
Sbjct: 168 VLDKRLFWIQYNREGSISRICSCDYNGGSVHFSKHLTQHNLFAMSLFGDRIFYSTWRKKT 227
Query: 336 RWLFWTDWGENPRIERIGMDGS 357
W+ G++ + RI ++ S
Sbjct: 228 IWIANKHTGKD--MVRINLNSS 247
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 13/69 (18%)
Query: 44 CHPTPLGALCTC-PPGEI--------LSNDSVTCQDMNECEQPG----YCSQMCTNTKGS 90
C P GA C P GE+ + D C D++EC+ + S C NT+G
Sbjct: 771 CGPMGCGAHSQCVPEGEVATCQCLRGFAGDGRVCSDVDECDMGTAACPHPSSECINTEGG 830
Query: 91 YICSCNEGY 99
Y+C C+EGY
Sbjct: 831 YVCRCSEGY 839
>gi|312086169|ref|XP_003144971.1| calcium binding EGF domain-containing protein [Loa loa]
Length = 650
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 164/374 (43%), Gaps = 98/374 (26%)
Query: 4 RCVNLTKVC-DGKTDCPNGADEGPGCDLAECKHKF--GLCSN------TCHPTPL-GALC 53
+C+ L +C DGK PN C + C F LC + C T G +C
Sbjct: 74 QCIKLEDLCVDGK---PNN-----DCLKSVCSSHFNLSLCDDISNNHCKCRTTKFNGTIC 125
Query: 54 TCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT------ 107
CP G L S C D++EC Q G C+Q C N G Y+C C GY L
Sbjct: 126 HCPRGFELKGRS--CIDIDECAQIGICAQKCINVPGGYVCECYPGYHLTMGRSIGNTNKS 183
Query: 108 ---CKAINHSAAFLIISNRHSI------------LVADLEEK-GKD--HRAQDIVVS--- 146
C+A S L++SNR +I LVA L+ D HR ++ S
Sbjct: 184 AGICRA-KGSDPLLLLSNRATIRRFDLVTNKYEPLVAKLDSAVAMDFLHRNDTLIWSDVS 242
Query: 147 -----------GLDLVE-----------------------GLAYDWIGGHIYWLDSRLNR 172
GL ++ GLA DW+ ++W D+ L++
Sbjct: 243 QEKIMICHMGKGLKTLQDVRGCAEGEHNITLIDKDVSTPDGLAVDWVHQLLFWTDTGLDQ 302
Query: 173 IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI 232
I V D R L +N+ +PR + +DP G +FWTDWG + IER GMDG+NR+ I
Sbjct: 303 INVLDLVTRKRRTLFSENLDEPRAIAVDPLRGL--IFWTDWGLSAHIERAGMDGNNRTVI 360
Query: 233 ISTK-IYWPNGLTLDIATRRVYFADSKLDFI-DC-----------KSLE-IKTNVNYSTI 278
IS + I WPNGL LDI +R+Y+AD+K+ I C +S E +K + +
Sbjct: 361 ISGEMIKWPNGLALDILEQRLYWADAKVKLIMSCDYWGQHIRLVLRSHERVKHPFSLTVF 420
Query: 279 FRKLYWIDEGGNGV 292
+LYW D GV
Sbjct: 421 EERLYWTDWDQEGV 434
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 16/138 (11%)
Query: 127 LVADLEEKGKDHRAQDIVVSG--LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN-R 183
L A +E G D + +++SG + GLA D + +YW D+++ I CD G + R
Sbjct: 343 LSAHIERAGMDGNNRTVIISGEMIKWPNGLALDILEQRLYWADAKVKLIMSCDYWGQHIR 402
Query: 184 IVL-AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 242
+VL + + + P + + L+WTDW + + GS+ T++ NG
Sbjct: 403 LVLRSHERVKHPFSLTV----FEERLYWTDWDQEGVLTANKFTGSDFKTVM-------NG 451
Query: 243 LTLDIATRRVYFADSKLD 260
++ + T RVY ++ D
Sbjct: 452 VSGPM-TVRVYHELAQPD 468
>gi|170583970|ref|XP_001896803.1| Calcium binding EGF domain containing protein [Brugia malayi]
gi|158595866|gb|EDP34347.1| Calcium binding EGF domain containing protein [Brugia malayi]
Length = 888
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 159/351 (45%), Gaps = 89/351 (25%)
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-- 107
G +C CP G L S C D++EC Q G C+Q C N G Y+C C GY L T
Sbjct: 415 GTICHCPRGFELKGRS--CIDIDECAQIGICAQKCINVPGGYVCECYPGYHLTMGRSTGT 472
Query: 108 ------CKAINHSAAFLIISNRHSI------------LVADL------------------ 131
C+A S L++SNR +I LVA L
Sbjct: 473 NKSAGICRA-KGSDPLLLLSNRATIRRFDLVTNKYEPLVAKLDSAVAMDFLHRNDTLIWS 531
Query: 132 ---EEK------GKDHRA-QDI------------VVSGLDLVEGLAYDWIGGHIYWLDSR 169
+EK GK + QD+ + + +GLA DW+ ++W D+
Sbjct: 532 DVSQEKIMICHMGKGLKTLQDVRGCAEGEHNITLIDKDVSTPDGLAVDWVHQLLFWTDTG 591
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L++I V D R L +N+ +PR + +DP G +FWTDWG + IER GMDG+NR
Sbjct: 592 LDQINVLDLVTRKRRTLFSENLDEPRAIAVDPLRGL--IFWTDWGLSAHIERAGMDGNNR 649
Query: 230 STIISTK-IYWPNGLTLDIATRRVYFADSKLDFI-DC-----------KSLE-IKTNVNY 275
+ IIS + I WPNGL LDI +R+Y+AD+K+ I C +S E +K +
Sbjct: 650 TVIISGEMIKWPNGLALDILEQRLYWADAKVKLIMSCDYWGQHIRLVLRSHERVKHPFSL 709
Query: 276 STIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG-------QLYEALA 319
+ +LYW D GV + GS+ +++G ++Y LA
Sbjct: 710 TVFEERLYWTDWDQEGV---LTANKFTGSDFKTVMNGVSGPMTVRVYHELA 757
>gi|7507774|pir||T16860 hypothetical protein T13C2.4 - Caenorhabditis elegans
Length = 1357
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 151/325 (46%), Gaps = 89/325 (27%)
Query: 4 RCVNLTKVC-DGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ ++K+C + DC +G +++ C K + C P+ G C C P +
Sbjct: 858 QCIEMSKLCASAQFDCGDG-------NMSVCSQKKII--EMCKPSSEG--CVCRPSFVRG 906
Query: 63 NDSVTCQD-----------MNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN------ 105
N+ C+D +NECE G C Q+C N GSY C+C+ GY + + +
Sbjct: 907 NNVCHCKDGYKLENGQCIDINECEIAGVCDQICLNIPGSYRCACHAGYQISFGDTKIGSG 966
Query: 106 ---HTCKAINHSAAFLIISNRHSILVADLEEK---------------------------- 134
+ C+A+ ++++NRH+I DL K
Sbjct: 967 RIANKCRAMG-GDPLVLLTNRHTIRQFDLVNKMHFPVSSSPGSAVAMDFHILNGTLIWSD 1025
Query: 135 -------------------GKD--HRAQDIVVSG--LDLVEGLAYDWIGGHIYWLDSRLN 171
G D + +IV++G + +GLA DW+ ++W D L+
Sbjct: 1026 VLSKQILKCSIGNVSNAFLGTDMCDKKHEIVLTGDKIHTPDGLAVDWVHDLLFWTDGGLD 1085
Query: 172 RIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS 230
+I V D +NG R++ + D + +PR + +DP G +FWTDWG+ RIER GMDG +R+
Sbjct: 1086 QINVLDMKNGKQRVLYSSD-LEEPRAIAVDPEVG--LIFWTDWGKKARIERSGMDGQHRT 1142
Query: 231 TIIS-TKIYWPNGLTLDIATRRVYF 254
I+ ++ WPNGL LD +RVY+
Sbjct: 1143 VIVEGDRVVWPNGLALDYVDKRVYW 1167
>gi|341880073|gb|EGT36008.1| hypothetical protein CAEBREN_12029 [Caenorhabditis brenneri]
Length = 1177
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 161/349 (46%), Gaps = 76/349 (21%)
Query: 4 RCVNLTKVCD-GKTDCPNG--ADEGPGCDLAECKHKFGLCSNTCHPTPL--GALCTCPPG 58
+C+ ++K+C K DC +G + G C C C P+ + +C C G
Sbjct: 632 QCLEMSKLCSSAKFDCGDGNLSVCGQSKITEMCDAHVDGC--VCRPSYIRDTTVCHCKDG 689
Query: 59 EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN---------HTCK 109
L N C D+NEC G C Q+C N GSY C+C+ GY L + + C+
Sbjct: 690 YKLENGQ--CVDINECTTAGICDQICLNIPGSYRCACHAGYKLSFGESRTSGSTIPNRCR 747
Query: 110 AINHSAAFLIISNRHSI--------------------------------LVADLEEK--- 134
AI ++++NRH+I + +D++ K
Sbjct: 748 AIG-GDPLVLLTNRHTIRQFDLVNKMHYPVSSKPGSAVAMDFHITNGTLIWSDVQSKQIL 806
Query: 135 ------------GKD--HRAQDIVVSG--LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDE 178
G + R +++++G + +GLA DW+ ++W D L++I V D
Sbjct: 807 KCSIGNTTESYLGTELCDRNHEVLLAGDKIHTPDGLAVDWVHDLLFWTDGGLDQINVLDM 866
Query: 179 NGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS-TKI 237
+ VL +++ +PR + +DP G +FWTDWG+N RIER GMDG +R I+ ++
Sbjct: 867 KTGKQRVLYSNDLEEPRAIAVDPEVG--LIFWTDWGKNARIERSGMDGQHRVVIVEGDRV 924
Query: 238 YWPNGLTLDIATRRVYFADSKLDFI---DCKSLEIKTNVNYSTIFRKLY 283
WPNGL LD +RVY+AD+K+ I D +IKT ++ R +
Sbjct: 925 VWPNGLALDYVDKRVYWADAKIKSIFSCDYWGKDIKTVLHSHQFLRHPF 973
>gi|47522862|ref|NP_999185.1| pro-epidermal growth factor precursor [Sus scrofa]
gi|55977733|sp|Q00968.2|EGF_PIG RecName: Full=Pro-epidermal growth factor; Short=EGF; Contains:
RecName: Full=Epidermal growth factor; Flags: Precursor
gi|13324649|gb|AAK18830.1|AF336151_1 epidermal growth factor precursor [Sus scrofa]
Length = 1214
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 136/297 (45%), Gaps = 52/297 (17%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C L C CS+ C T G +C CP +L D TC
Sbjct: 382 CPAGFVLLPDGKRCHQLISCPSNVSECSHDCVLTSDGPICFCPEDSVLEADGKTCSG--- 438
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---- 126
C P G CSQ+C + ++ C C GY L+ D +C+A + FL+ +N I
Sbjct: 439 CSSPDNGGCSQLCLPLSPVTWECGCFPGYDLQLDKKSCRA-SGPPPFLLFANSQDIRHMH 497
Query: 127 ---------------LVADLEEKGKDHRA--------------------QDIVVSGLDLV 151
+V L+ +++ + + +D+
Sbjct: 498 FDGTDYETLLNQQIGMVLALDHDPVENKVYFAHTALKWIERANMDGSQRERLFEEAVDVP 557
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EGLA DWIG YW D + IE D NG R ++ K++I+QPRG+ + P + LFWT
Sbjct: 558 EGLAIDWIGRKFYWTDRGRSLIEGSDLNGKYREIIIKEDISQPRGIAVHPV--AKRLFWT 615
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
D G NPRIE + G R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 616 DMGTNPRIESSSLQGIGRQVIASSDLVWPSGITIDYLTDKLYWCDAKQSVIEMSNLD 672
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 178/433 (41%), Gaps = 69/433 (15%)
Query: 19 PNGADEGPGCDLAECKHKFGLCSNT-CHPTPLGALCTCPPGEILSNDSVTCQDMNECEQP 77
P + D CK + G C + C P +CTC G LS D C+D+NEC
Sbjct: 304 PKAEGDAWASDQKLCKLRKGNCRGSMCGQEPKSHVCTCAEGYTLSQDGRKCEDVNECAFW 363
Query: 78 GY-CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD------ 130
+ C+ C NT GSY C+C G+VL D C + + + + +L +D
Sbjct: 364 NHGCTLGCENTPGSYYCTCPAGFVLLPDGKRCHQLISCPSNVSECSHDCVLTSDGPICFC 423
Query: 131 -----LEEKGKDHRAQDIVVSG--LDLVEGLA-YDWIGGHIYWLDSRLNRIEVCDENGTN 182
LE GK +G L L+ W G D +L++ + C +G
Sbjct: 424 PEDSVLEADGKTCSGCSSPDNGGCSQLCLPLSPVTWECGCFPGYDLQLDK-KSCRASGPP 482
Query: 183 RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 242
+L + + I + DG++ T+++ +I
Sbjct: 483 PFLL--------------------------FANSQDIRHMHFDGTDYETLLNQQIGMVLA 516
Query: 243 LTLDIATRRVYFADSKLDFIDC-------------KSLEIKTNVNYSTIFRKLYWIDEGG 289
L D +VYFA + L +I+ +++++ + I RK YW D G
Sbjct: 517 LDHDPVENKVYFAHTALKWIERANMDGSQRERLFEEAVDVPEGLAIDWIGRKFYWTDRGR 576
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ I ++++G I++ + + + + + LFWTD G NPRI
Sbjct: 577 S----LIEGSDLNGKYREIIIKEDISQPRGIAVH---------PVAKRLFWTDMGTNPRI 623
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
E + G R I S+ + WP+G+T+D T ++Y+ D+K I+ N DG+ RQ++ D
Sbjct: 624 ESSSLQGIGRQVIASSDLVWPSGITIDYLTDKLYWCDAKQSVIEMSNLDGSRRQRLAQND 683
Query: 410 LMVEFTNDLMGDN 422
+ F + D+
Sbjct: 684 VGHPFAVAVFEDH 696
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 37/258 (14%)
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEG 153
+C EG N TC A FLI S+ +SI DLE G +H Q + +G+ ++
Sbjct: 27 NCPEGSPSGNGNATCVG---PAPFLIFSHGNSIFRIDLE--GTNHE-QLVADAGISVLMD 80
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRW---- 207
Y+ IYW+D ++ NGT ++ + N++ GM ++ W
Sbjct: 81 FHYN--EERIYWVDLERQLLQRVFLNGTRQEKVCNLEKNVS---GMAIN------WINEE 129
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD---SKLDFIDC 264
L W++ E I M G+N ++S + +P + +D R ++++ L D
Sbjct: 130 LIWSNQQEG-TITVTDMKGNNSRVLLSA-LKYPANVAVDPVERLMFWSSVVAGSLHRADV 187
Query: 265 KSLEIK---------TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+E++ V+ + ++L+WI G +I + DG + +
Sbjct: 188 TGVEVRLLLETSEEIAAVSLDVLDKRLFWIQYNREGGSSRICSCDYDGGSVHFSKHLTQH 247
Query: 316 EALALDLENGMLYYSTLK 333
A+ L ++YST K
Sbjct: 248 NVFAMSLFGDHIFYSTWK 265
>gi|170058498|ref|XP_001864948.1| low-density lipoprotein receptor [Culex quinquefasciatus]
gi|167877580|gb|EDS40963.1| low-density lipoprotein receptor [Culex quinquefasciatus]
Length = 1753
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 139/343 (40%), Gaps = 98/343 (28%)
Query: 71 MNECEQP-----GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHS 125
+N C Q G CS +C + C+C G L+ D TC N L+IS +
Sbjct: 641 INRCAQDSSGRRGGCSHLCLPNRNHRRCACPIGLTLKPDQRTCS--NQPDKLLLISRKKD 698
Query: 126 ILVADLEE----KGKD----------------------------------------HRAQ 141
I V L++ KG D + +
Sbjct: 699 IRVRQLDQQNPTKGVDMVVPLDGIKSNVAIDWCSQSNVIYWTDVGKSIISRAFINGSQQE 758
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
I+ S L GLA DWI IYW D+ NRIE +G R +L + + +PR +++ P
Sbjct: 759 AIIKSNLISPAGLALDWITDKIYWTDAGTNRIEAASTDGRQRALLIWERLDKPRDIVVHP 818
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
S G ++FW+DWG NP IER GMDG+ R T++S + WPNGL LDI + ++YF D
Sbjct: 819 SEG--FMFWSDWGSNPLIERAGMDGTGRVTLVSENLQWPNGLALDIDSHKLYFVDGGTKL 876
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
++ N DG+ + L++ L LD
Sbjct: 877 LE----------------------------------YVNFDGTGRNRLITEGLKHPFGLD 902
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+ + R ++WTDW + + G NR TI++
Sbjct: 903 VHD-----------RKVYWTDWDTHSIQVADKITGKNRDTILA 934
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 121/263 (46%), Gaps = 56/263 (21%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+D++ GL+ GLA DWI ++W DS R+EV +G R V+A +++ +PR + +
Sbjct: 446 RDVIKWGLESPGGLAVDWIHDLLFWTDSGTRRVEVSTFDGKLRAVIAANDLDKPRAIAV- 504
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
PG +FWTDWG P+IE+ MDGS R TI+S I+WPNGL +D T R+Y+AD+K
Sbjct: 505 -HPGKTTVFWTDWGTVPKIEKSYMDGSERQTIVSESIFWPNGLAIDYTTNRIYWADAK-- 561
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
I AN DG ++S L A+
Sbjct: 562 ---------------------------------HVIESANFDGKGRKKILSNNLPHPFAM 588
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW ++G N I+ +++P +DI +
Sbjct: 589 TLFEDSMY-----------WTDWHTRTVSSANKVNGRN-FRIVQEGLHFP----MDIQS- 631
Query: 381 RVYFADSKLDFIDFCNYDGTGRQ 403
Y + ++I+ C D +GR+
Sbjct: 632 --YHPSRQPEYINRCAQDSSGRR 652
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 87/154 (56%), Gaps = 12/154 (7%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
IV SGL+ G+A DW+ ++YW D+ L +IEV +G+ R + + PR ++L P
Sbjct: 1357 IVASGLNTPNGIAVDWLADNLYWTDAALKKIEVSRLDGSCRKAVLTGGLDDPRSIILYPK 1416
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G ++FW DWG+ PRIE+ MDGS R +II +++ +P GL +D +++Y+AD++ D I
Sbjct: 1417 RG--FMFWADWGQAPRIEKAYMDGSERRSIIDSELGFPTGLAIDFDMKKLYWADAQQDRI 1474
Query: 263 DCKSLEIKTNVN----------YSTIFRKLYWID 286
+ + K ++ I +YW D
Sbjct: 1475 EMCDFDGKRRTRVISQATHSFGFTLIGGYMYWTD 1508
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 118/258 (45%), Gaps = 48/258 (18%)
Query: 168 SRLNRIEVCDENGTN-RIVLAKDNITQ--PRGMMLDPSPGTRWLFWTDWGENPRIERIGM 224
+R +R NGT+ R+ +I + P + LD LFWTD + I+R +
Sbjct: 382 ARTSRTATSSANGTSLRVRPQFTSIVKGLPNAIALDYHYQKDLLFWTDVSID-VIKRSYI 440
Query: 225 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYW 284
+G+ +I + P GL +D I L+W
Sbjct: 441 NGTGVRDVIKWGLESPGGLAVDW------------------------------IHDLLFW 470
Query: 285 IDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWG 344
D G V + + DG +++ + L + A+ + G K T +FWTDWG
Sbjct: 471 TDSGTRRVEV----STFDGKLRAVIAANDLDKPRAIAVHPG-------KTT--VFWTDWG 517
Query: 345 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
P+IE+ MDGS R TI+S I+WPNGL +D T R+Y+AD+K I+ N+DG GR++
Sbjct: 518 TVPKIEKSYMDGSERQTIVSESIFWPNGLAIDYTTNRIYWADAK-HVIESANFDGKGRKK 576
Query: 405 VILIDLMVEFTNDLMGDN 422
++ +L F L D+
Sbjct: 577 ILSNNLPHPFAMTLFEDS 594
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 248 ATRRVY---FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
A RRV F+DSK+ I L + + LYW D KI + +DGS
Sbjct: 1342 AIRRVSMNNFSDSKV--IVASGLNTPNGIAVDWLADNLYWTDAALK----KIEVSRLDGS 1395
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+++G LD ++ Y ++FW DWG+ PRIE+ MDGS R +II
Sbjct: 1396 CRKAVLTG------GLDDPRSIILYPKRG---FMFWADWGQAPRIEKAYMDGSERRSIID 1446
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+++ +P GL +D +++Y+AD++ D I+ C++DG R +VI
Sbjct: 1447 SELGFPTGLAIDFDMKKLYWADAQQDRIEMCDFDGKRRTRVI 1488
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 37/216 (17%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK- 136
G CS +C Y C+C G L + TCK + + +LI ++R I L+ +
Sbjct: 961 GGCSYICLLNPSGYSCACPIGIQLNDNGKTCK--DGPSNYLIFAHRTDIRQVSLDSDYQI 1018
Query: 137 -----------------DHRAQDIVVSGLDLVEGLAY------------DWIGGHIYWLD 167
D R D+ + D +E + D IG IYW
Sbjct: 1019 DVVLPLPPISNAVALDVDARTGDVYWA--DTIEDVIMRSSRTDAHQHLCDSIGRKIYWA- 1075
Query: 168 SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227
+R IE + +G+ R VL ++ PRG+ LD G +LFW+DW ++P IER MDG
Sbjct: 1076 TRECSIECSELDGSVRTVLVWHDLDHPRGIALDYDMG--YLFWSDWRKDPVIERADMDGE 1133
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
R TI++T + + +GL +D +R+Y+ DSK I+
Sbjct: 1134 RRKTIVTTDLGYISGLAVDGHEKRIYWTDSKSKKIE 1169
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 30/223 (13%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRR--VYFADSKLDFIDCKSLEIKTNVNYS 276
I ++ +D + ++ N + LD+ R VY+AD+ D I S
Sbjct: 1007 IRQVSLDSDYQIDVVLPLPPISNAVALDVDARTGDVYWADTIEDVIMRSSRTDAHQHLCD 1066
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
+I RK+YW I + +DGS ++LV L + L+ M Y
Sbjct: 1067 SIGRKIYWATR-----ECSIECSELDGSVRTVLVWHDLDHPRGIALDYDMGY-------- 1113
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
LFW+DW ++P IER MDG R TI++T + + +GL +D +R+Y+ DSK I+ C+
Sbjct: 1114 -LFWSDWRKDPVIERADMDGERRKTIVTTDLGYISGLAVDGHEKRIYWTDSKSKKIESCD 1172
Query: 397 YDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYS 439
+G R+ ++ +N AL + GM+Y++
Sbjct: 1173 MNGNSRKVLL--------------ENIPHPHALAVTRGMVYWT 1201
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 136/317 (42%), Gaps = 41/317 (12%)
Query: 110 AINHSAAFLIISN-RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS 168
A+++ +L S+ R ++ + G+ R + IV + L + GLA D IYW DS
Sbjct: 1106 ALDYDMGYLFWSDWRKDPVIERADMDGE--RRKTIVTTDLGYISGLAVDGHEKRIYWTDS 1163
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTR-WLFWTDWGENPRIERIGMDGS 227
+ +IE CD NG +R VL +NI P + + TR ++WTDW + +
Sbjct: 1164 KSKKIESCDMNGNSRKVLL-ENIPHPHALAV-----TRGMVYWTDWMTK---ALHSVSKT 1214
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID--CKSLEIKTNVNYSTIFRKLYWI 285
N S I N + + + + + + + C L ++ YS +
Sbjct: 1215 NISKIKKVAKDLENLMDVKVVLEQEEYTEDACGKNNGGCSHLCLRKPKGYSCKCPTGLLM 1274
Query: 286 DEGGNG-----------VPLK--IGKANMDGSNA--SILVSGQLYEALALDLENGMLYYS 330
E G V L+ IG+ ++D + +L ++ +ALD +Y
Sbjct: 1275 RETGGKECKTVPDEYLLVALRSGIGRISLDTQDLFDVVLPIDGVHGVVALDYHFDRMY-- 1332
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDG-SNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
+F+ D + I R+ M+ S+ I+++ + PNG+ +D +Y+ D+ L
Sbjct: 1333 -------IFYADVNVDA-IRRVSMNNFSDSKVIVASGLNTPNGIAVDWLADNLYWTDAAL 1384
Query: 390 DFIDFCNYDGTGRQQVI 406
I+ DG+ R+ V+
Sbjct: 1385 KKIEVSRLDGSCRKAVL 1401
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 140/376 (37%), Gaps = 99/376 (26%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q IV + GLA D+ IYW D++ + IE + +G R + +N+ P M L
Sbjct: 533 QTIVSESIFWPNGLAIDYTTNRIYWADAK-HVIESANFDGKGRKKILSNNLPHPFAMTLF 591
Query: 201 PSPGTRWLFWTDW------------GENPRI-----------------------ERIGMD 225
++WTDW G N RI R D
Sbjct: 592 EDS----MYWTDWHTRTVSSANKVNGRNFRIVQEGLHFPMDIQSYHPSRQPEYINRCAQD 647
Query: 226 GSNRSTIIS---------TKIYWPNGLTLDIATRRVYFADSKLDFID------CKSLE-- 268
S R S + P GLTL R KL I + L+
Sbjct: 648 SSGRRGGCSHLCLPNRNHRRCACPIGLTLKPDQRTCSNQPDKLLLISRKKDIRVRQLDQQ 707
Query: 269 --------------IKTNV--NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
IK+NV ++ + +YW D G + I +A ++GS ++
Sbjct: 708 NPTKGVDMVVPLDGIKSNVAIDWCSQSNVIYWTDVGKS----IISRAFINGSQQEAIIKS 763
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
L L L+ T ++WTD G N RIE DG R+ +I ++ P
Sbjct: 764 NLISPAGLALD---------WITDKIYWTDAGTN-RIEAASTDGRQRALLIWERLDKPRD 813
Query: 373 LTLDIATRRVYFAD-SKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDL 431
+ + + ++++D I+ DGTGR V L+ +++ N LALD+
Sbjct: 814 IVVHPSEGFMFWSDWGSNPLIERAGMDGTGR--VTLVSENLQWPN---------GLALDI 862
Query: 432 ENGMLYYSTEGAEFLK 447
++ LY+ G + L+
Sbjct: 863 DSHKLYFVDGGTKLLE 878
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ I+ S L GLA D+ +YW D++ +RIE+CD +G R + T G L
Sbjct: 1442 RSIIDSELGFPTGLAIDFDMKKLYWADAQQDRIEMCDFDGKRRTRVIS-QATHSFGFTLI 1500
Query: 201 PSPGTRWLFWTDW 213
+++WTDW
Sbjct: 1501 GG----YMYWTDW 1509
>gi|348564617|ref|XP_003468101.1| PREDICTED: pro-epidermal growth factor-like [Cavia porcellus]
Length = 1165
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 136/299 (45%), Gaps = 56/299 (18%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C +L C CS+ C T G LC CP G +L D TC +
Sbjct: 344 CPAGFILLPDGKRCHELVSCPSGASGCSHGCVLTSDGPLCFCPKGSVLQADGKTC---SG 400
Query: 74 CEQP--GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
C P G CSQ C T + S+ C C GY L+ D +C A + L+ +N I
Sbjct: 401 CSSPDNGGCSQHCITRSPVSWECGCFPGYDLQLDGKSCAA-SGPQPLLLFANSQDIRHMH 459
Query: 131 LEEKGKDHRA-----------------------------------------QDIVVSGLD 149
+ G D+R + ++ +D
Sbjct: 460 FD--GTDYRVLLSQQMGTVFALDHDPVENKMYFAHTALKWIERANMDGSQRERLIEEDVD 517
Query: 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
+ EGLA DWIG +YW DS + IE D NG +R ++ K+NI++PRG+ + P + LF
Sbjct: 518 IPEGLAVDWIGRRLYWTDSGKSVIEGSDLNGKHRQIIIKENISRPRGIAVHPM--AKRLF 575
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
WTD G NPRIE + GS R I + + P+GLT+D T +Y+ D+ I+ +L+
Sbjct: 576 WTDVGMNPRIESASLQGSGRLLIAGSDLTEPSGLTIDYLTDTLYWCDAMRSVIEMANLD 634
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 138/372 (37%), Gaps = 67/372 (18%)
Query: 48 PLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGSYICSCNEGYVLEYDNH 106
P C C G S D +C+D+NEC + C+ C N GSY C+C G++L D
Sbjct: 296 PGSQSCACAEGYAPSQDRKSCEDVNECAFWNHGCTLGCENIPGSYYCTCPAGFILLPDGK 355
Query: 107 TCKAINHSAAFLIISNRHSILVAD-----------LEEKGK--------------DHRAQ 141
C + + + +L +D L+ GK H
Sbjct: 356 RCHELVSCPSGASGCSHGCVLTSDGPLCFCPKGSVLQADGKTCSGCSSPDNGGCSQHCIT 415
Query: 142 DIVVS-------GLDL-VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
VS G DL ++G + G L + I +GT+ VL +
Sbjct: 416 RSPVSWECGCFPGYDLQLDGKSCAASGPQPLLLFANSQDIRHMHFDGTDYRVLLSQQMGT 475
Query: 194 PRGMMLDPSPGTRWLFWT--DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
+ DP + T W IER MDGS R +I + P GL +D RR
Sbjct: 476 VFALDHDPVENKMYFAHTALKW-----IERANMDGSQRERLIEEDVDIPEGLAVDWIGRR 530
Query: 252 VYFADSKLDFIDCKSLE-------IKTNVN------YSTIFRKLYWIDEGGNGVPLKIGK 298
+Y+ DS I+ L IK N++ + ++L+W D G N +I
Sbjct: 531 LYWTDSGKSVIEGSDLNGKHRQIIIKENISRPRGIAVHPMAKRLFWTDVGMN---PRIES 587
Query: 299 ANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSN 358
A++ GS ++ L E L ++ T L+W D IE +DGS
Sbjct: 588 ASLQGSGRLLIAGSDLTEPSGLTID---------YLTDTLYWCD-AMRSVIEMANLDGSR 637
Query: 359 RSTIISTKIYWP 370
R + + P
Sbjct: 638 RQRLGQGDVGRP 649
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 110/237 (46%), Gaps = 34/237 (14%)
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
A FLI ++ +SI D E G +H Q +V +G ++ + + + G IYW+D ++
Sbjct: 7 APFLIFTHENSIFRIDPE--GTNHE-QLVVDAGASVI--MDFHYKEGRIYWVDLETKLLQ 61
Query: 175 VCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRWL----FWTDWGENPRIERIGMDGSN 228
NG+ ++ ++N++ GM ++ W+ W++ E I + GSN
Sbjct: 62 RVFLNGSRQEKVCNIEENVS---GMAIN------WINEEVIWSNQQEG-IITVTDLKGSN 111
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSK---LDFIDCKSLEIK---------TNVNYS 276
++ST + P + +D R ++++ + L D +E+K T ++
Sbjct: 112 SHVLLST-LKQPTYIAVDPVERFIFWSSEEAGSLSRADLGGVEVKSLLVTEKKITAMSLD 170
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
+ ++L+W+ EGG G IG + DG++ ++ Y + + ++YST K
Sbjct: 171 VLNKRLFWVQEGGEGSDSHIGSCDYDGNSIQLIKHPTQYSVFVMSVFGDRIFYSTWK 227
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 16/114 (14%)
Query: 296 IGKANMDGSNASILVSGQLYEALALD---LENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
I + DG++ +L+S Q+ ALD +EN M + T L W IER
Sbjct: 455 IRHMHFDGTDYRVLLSQQMGTVFALDHDPVENKMYFAHTA-----LKW--------IERA 501
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
MDGS R +I + P GL +D RR+Y+ DS I+ + +G RQ +I
Sbjct: 502 NMDGSQRERLIEEDVDIPEGLAVDWIGRRLYWTDSGKSVIEGSDLNGKHRQIII 555
>gi|443721784|gb|ELU10964.1| hypothetical protein CAPTEDRAFT_222521 [Capitella teleta]
Length = 232
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
DI+ GL +GLA DW+ +YW DS NRIEV + +G+ R VL +N+ QPR + LDP
Sbjct: 89 DIITRGLVSPDGLACDWLARKLYWTDSETNRIEVSNVDGSYRKVLYWENLDQPRAIALDP 148
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSN--RSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGE+P+IER GMDG + R II T I+WPNGLT+D A ++++AD+KL
Sbjct: 149 LNG--YMYWTDWGEHPKIERAGMDGRHGSRQVIIKTDIFWPNGLTVDYAESKIFWADAKL 206
Query: 260 DFI 262
FI
Sbjct: 207 HFI 209
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 82/131 (62%), Gaps = 19/131 (14%)
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRW 337
RKLYW D N +I +N+DGS +L L + A+ALD NG +Y
Sbjct: 108 RKLYWTDSETN----RIEVSNVDGSYRKVLYWENLDQPRAIALDPLNGYMY--------- 154
Query: 338 LFWTDWGENPRIERIGMDGSN--RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE+P+IER GMDG + R II T I+WPNGLT+D A ++++AD+KL FI C
Sbjct: 155 --WTDWGEHPKIERAGMDGRHGSRQVIIKTDIFWPNGLTVDYAESKIFWADAKLHFIHSC 212
Query: 396 NYDGTGRQQVI 406
N+DGTGR+ V+
Sbjct: 213 NFDGTGRRVVV 223
>gi|393906948|gb|EJD74460.1| calcium binding EGF domain-containing protein [Loa loa]
Length = 943
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 145/318 (45%), Gaps = 80/318 (25%)
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-- 107
G +C CP G L S C D++EC Q G C+Q C N G Y+C C GY L
Sbjct: 415 GTICHCPRGFELKGRS--CIDIDECAQIGICAQKCINVPGGYVCECYPGYHLTMGRSIGN 472
Query: 108 -------CKAINHSAAFLIISNRHSI------------LVADL----------------- 131
C+A S L++SNR +I LVA L
Sbjct: 473 TNKSAGICRA-KGSDPLLLLSNRATIRRFDLVTNKYEPLVAKLDSAVAMDFLHRNDTLIW 531
Query: 132 ----EEK------GKDHRA-QDI------------VVSGLDLVEGLAYDWIGGHIYWLDS 168
+EK GK + QD+ + + +GLA DW+ ++W D+
Sbjct: 532 SDVSQEKIMICHMGKGLKTLQDVRGCAEGEHNITLIDKDVSTPDGLAVDWVHQLLFWTDT 591
Query: 169 RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
L++I V D R L +N+ +PR + +DP G +FWTDWG + IER GMDG+N
Sbjct: 592 GLDQINVLDLVTRKRRTLFSENLDEPRAIAVDPLRGL--IFWTDWGLSAHIERAGMDGNN 649
Query: 229 RSTIISTK-IYWPNGLTLDIATRRVYFADSKLDFI-DC-----------KSLE-IKTNVN 274
R+ IIS + I WPNGL LDI +R+Y+AD+K+ I C +S E +K +
Sbjct: 650 RTVIISGEMIKWPNGLALDILEQRLYWADAKVKLIMSCDYWGQHIRLVLRSHERVKHPFS 709
Query: 275 YSTIFRKLYWIDEGGNGV 292
+ +LYW D GV
Sbjct: 710 LTVFEERLYWTDWDQEGV 727
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 16/138 (11%)
Query: 127 LVADLEEKGKDHRAQDIVVSG--LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN-R 183
L A +E G D + +++SG + GLA D + +YW D+++ I CD G + R
Sbjct: 636 LSAHIERAGMDGNNRTVIISGEMIKWPNGLALDILEQRLYWADAKVKLIMSCDYWGQHIR 695
Query: 184 IVL-AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 242
+VL + + + P + + L+WTDW + + GS+ T++ NG
Sbjct: 696 LVLRSHERVKHPFSLTV----FEERLYWTDWDQEGVLTANKFTGSDFKTVM-------NG 744
Query: 243 LTLDIATRRVYFADSKLD 260
++ + T RVY ++ D
Sbjct: 745 VSGPM-TVRVYHELAQPD 761
>gi|324506768|gb|ADY42882.1| Low-density lipoprotein receptor-related protein 4 [Ascaris suum]
Length = 641
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 148/331 (44%), Gaps = 72/331 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C+ K+CDG+ DCP G DEG C EC +G CS+ C P G LC+C GE L+
Sbjct: 240 KCIPREKLCDGRKDCPRGNDEGGRC--GECA-AYG-CSHMCTDRPDGPLCSCREGETLAF 295
Query: 64 DSVTCQDMNECEQPG--YCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA----------- 110
D C D+NECE CS C N +G + C C EGY L D H+C A
Sbjct: 296 DGRICVDVNECETAAGHICSHKCINNEGMFKCECFEGYDLGSDTHSCHAKPDPYSAIFFS 355
Query: 111 ------------------------------INHSAAFLIISNRHSILVADLEEKGKDHRA 140
+ S AF N + ++++ G H A
Sbjct: 356 LGSEVRHMPPYSVGSTIGYGTYQHNDRVGTVVRSIAFAPSFNHLLMATSNVDHIGHIHSA 415
Query: 141 ----QDIVVSGLDLVEGLAYDWIGGHIYWL---DSRLNRIEVCDENGTNRIVLAKDNITQ 193
Q +V G+ + +A DW+ ++Y+ S L + VC +G +L K ++
Sbjct: 416 SGGLQKCIVDGVKGIANIAIDWVTNNVYYTAQHPSSLTGVGVCGFDGRFCRLLVKGIVSD 475
Query: 194 P-------RGMMLDPSPGTRWLFWTDWG---ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
RG++++P ++W D ++P+I MDG+N T++STK+ P GL
Sbjct: 476 EYYRRQVYRGLVVNPVYAI--MYWIDVPGSFDSPKIMSAYMDGTNIRTLVSTKLEHPQGL 533
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
+D + +YFAD +L I+ K NVN
Sbjct: 534 AMDYIKQTLYFADVELRLIE------KVNVN 558
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 296 IGKANMDGSNASILVSG---------QLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+G DG +LV G Q+Y L ++ ++Y W+ ++
Sbjct: 455 VGVCGFDGRFCRLLVKGIVSDEYYRRQVYRGLVVNPVYAIMY--------WIDVPGSFDS 506
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
P+I MDG+N T++STK+ P GL +D + +YFAD +L I+ N + R V
Sbjct: 507 PKIMSAYMDGTNIRTLVSTKLEHPQGLAMDYIKQTLYFADVELRLIEKVNVNSHERTMV 565
>gi|57163929|ref|NP_001009381.1| pro-epidermal growth factor precursor [Felis catus]
gi|67462324|sp|Q95ND4.1|EGF_FELCA RecName: Full=Pro-epidermal growth factor; Short=EGF; Contains:
RecName: Full=Epidermal growth factor; Flags: Precursor
gi|14009441|dbj|BAB47391.1| epidermal growth factor [Felis catus]
Length = 1210
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 129/282 (45%), Gaps = 48/282 (17%)
Query: 29 DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQP--GYCSQMCTN 86
L C CS+ C T G +C CP G +L D TC C P G CSQ+C
Sbjct: 394 QLISCPSNTSKCSHDCVLTSDGPICFCPEGSVLETDGKTCSG---CSSPDNGGCSQLCLP 450
Query: 87 -TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI------------------- 126
+ S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 451 LSPVSWECGCFPGYDLQLDKKSCAA-SGPQPFLLFANSQDIRHVRFDGTDYGSLLSQQMG 509
Query: 127 LVADLEEKGKDHR--------------------AQDIVVSGLDLVEGLAYDWIGGHIYWL 166
+V L+ +++ + ++ +D+ EGLA DWI YW
Sbjct: 510 MVFALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEAVDVPEGLAIDWIDRKFYWT 569
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226
D IE D NG +R ++ K+ ++QPRG+ + P + LFWTD G NPRIE + G
Sbjct: 570 DRGKALIEGSDLNGKHREIIIKEEVSQPRGIAVHPM--AKRLFWTDMGINPRIESSSLQG 627
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 628 IGRRVIASSDLVWPSGITIDYLTDKLYWCDAKQSVIEMANLD 669
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 173/431 (40%), Gaps = 80/431 (18%)
Query: 25 GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQM 83
PG L C K + C LCTC G LS D C+D+NEC + C+
Sbjct: 310 APGQKL--CLRKGNCTGSVCEQDSKSHLCTCAEGYTLSPDGKHCEDVNECAFWNHGCTLG 367
Query: 84 CTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD-----------LE 132
C N GSY C+C G++L D C + + + +L +D LE
Sbjct: 368 CENIPGSYYCTCPVGFILLPDGKRCHQLISCPSNTSKCSHDCVLTSDGPICFCPEGSVLE 427
Query: 133 EKGKDHRAQDIVVSG--LDLVEGLA-YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
GK +G L L+ W G D +L++ + C +G +L +
Sbjct: 428 TDGKTCSGCSSPDNGGCSQLCLPLSPVSWECGCFPGYDLQLDK-KSCAASGPQPFLLFAN 486
Query: 190 N----------------ITQPRGMM--LDPSPGTRWLFWTDWGENPRIERIGMDGSNRST 231
+ ++Q GM+ LD P +++ IER MDGS R
Sbjct: 487 SQDIRHVRFDGTDYGSLLSQQMGMVFALDHDPVENKIYFAHTALK-WIERANMDGSQRER 545
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+I + P GL +D+ID RK YW D G
Sbjct: 546 LIEEAVDVPEGLA--------------IDWID----------------RKFYWTDRG--- 572
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
I ++++G + I++ ++ + + + + LFWTD G NPRIE
Sbjct: 573 -KALIEGSDLNGKHREIIIKEEVSQPRGIAVH---------PMAKRLFWTDMGINPRIES 622
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
+ G R I S+ + WP+G+T+D T ++Y+ D+K I+ N DG+ RQ++ D+
Sbjct: 623 SSLQGIGRRVIASSDLVWPSGITIDYLTDKLYWCDAKQSVIEMANLDGSKRQRLAQNDVG 682
Query: 412 VEFTNDLMGDN 422
F + D+
Sbjct: 683 HPFAIAVFEDH 693
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 111/279 (39%), Gaps = 42/279 (15%)
Query: 95 CNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGL 154
C+EG N TC FLI S+ SI DL+ + D VS + +
Sbjct: 28 CSEGSSSGKGNSTCVG---PEPFLIFSHGGSIFRIDLDGTNYEQLVADAGVSVI-----M 79
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA--KDNITQPRGMMLDPSPGTRW----L 208
+ + +YW+D ++ NGT + + + N++ GM ++ W L
Sbjct: 80 DFHYYKERLYWVDLERQLLQRVFLNGTRQETVCNIEKNVS---GMAIN------WINEEL 130
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS---KLDFIDCK 265
W++ E I M G+N ++S + +P + +D R ++++ L D
Sbjct: 131 IWSNQQEG-IITVTDMKGNNSRVLLSA-LKYPANVAIDPVERFIFWSSEVAGSLHRADLN 188
Query: 266 SLEIK---------TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE 316
+E+K T V+ + ++L+WI +G I N DG + +
Sbjct: 189 GVEVKILLETSERITAVSLDVLDKRLFWIQNNRDGSNSYICSCNYDGGSVHFNKHLTQHS 248
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A+ L ++YST W T W N R + + ++
Sbjct: 249 LFAMSLFGDRIFYST-----WKKKTIWIANKRKDMVRIN 282
>gi|3047267|gb|AAC14024.1| epidermal growth factor precursor [Sus scrofa]
Length = 574
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 131/281 (46%), Gaps = 48/281 (17%)
Query: 30 LAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQP--GYCSQMCTN- 86
L C CS+ C T G +C CP +L D TC + C P G CSQ+C
Sbjct: 10 LISCPSNVSECSHDCVLTSDGPICFCPEDSVLEADGKTC---SGCSSPDNGGCSQLCLPL 66
Query: 87 TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI-------------------L 127
+ ++ C C GY L+ D +C+A + FL+ +N I +
Sbjct: 67 SPVTWECGCFPGYDLQLDKKSCRA-SGPPPFLLFANSQDIRHMHFDGTDYETLLNQQIGM 125
Query: 128 VADLEEKGKDHRA--------------------QDIVVSGLDLVEGLAYDWIGGHIYWLD 167
V L+ +++ + + +D+ EGLA DWIG YW D
Sbjct: 126 VLALDHDPVENKVYFAHTALKWIERANMDGSQRERLFEEAVDVPEGLAIDWIGRKFYWTD 185
Query: 168 SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227
+ IE D NG R ++ K++I+QPRG+ + P + LFWTD G NPRIE + G
Sbjct: 186 RGRSLIEGSDLNGKYREIIIKEDISQPRGIAVHPV--AKRLFWTDMGTNPRIESSSLQGI 243
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 244 GRRVIASSDLVWPSGITIDYLTDKLYWCDAKQSVIEMSNLD 284
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 26/217 (11%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC-------------K 265
I + DG++ T+++ +I L D +VYFA + L +I+ +
Sbjct: 105 IRHMHFDGTDYETLLNQQIGMVLALDHDPVENKVYFAHTALKWIERANMDGSQRERLFEE 164
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
++++ + I RK YW D G + I ++++G I++ + + G
Sbjct: 165 AVDVPEGLAIDWIGRKFYWTDRGRS----LIEGSDLNGKYREIIIKEDISQP------RG 214
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
+ + K LFWTD G NPRIE + G R I S+ + WP+G+T+D T ++Y+
Sbjct: 215 IAVHPVAK---RLFWTDMGTNPRIESSSLQGIGRRVIASSDLVWPSGITIDYLTDKLYWC 271
Query: 386 DSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
D+K I+ N DG+ RQ++ D+ F + D+
Sbjct: 272 DAKQSVIEMSNLDGSRRQRLAQNDVGHPFAVAVFEDH 308
>gi|308502436|ref|XP_003113402.1| hypothetical protein CRE_26493 [Caenorhabditis remanei]
gi|308263361|gb|EFP07314.1| hypothetical protein CRE_26493 [Caenorhabditis remanei]
Length = 926
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 129/282 (45%), Gaps = 68/282 (24%)
Query: 44 CHPTPL--GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVL 101
C P+ + +C C G L N C D+ ECE PG C Q+C NT GSY C+C+ GY L
Sbjct: 423 CRPSYITNSTVCHCKDGYKLENKQ--CVDIIECETPGVCDQICLNTPGSYRCACHAGYQL 480
Query: 102 EYDN---------HTCKAINHSAAFLIISNRH--------------------SILVADLE 132
+ + C+A+ ++++NRH S + D
Sbjct: 481 SFGETKTGSRGVANRCRAMG-GDPLVLLTNRHTIRQFDLVNKMHFPVSSKPGSAVAMDFH 539
Query: 133 EKGKD-----------------------------HRAQDIVVSG--LDLVEGLAYDWIGG 161
K + ++++SG + +GLA DW+
Sbjct: 540 IKNGTLIWSDVLSKQILRCYIGNVSDAFLGTEMCDKKHEVILSGDKIHTPDGLAVDWVHD 599
Query: 162 HIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIER 221
++W D L++I V D + VL ++ +PR + +DP G +FWTDWG+ RIER
Sbjct: 600 LLFWTDGGLDQINVLDMKTGKQRVLYSSDLEEPRAIAVDPEVG--LIFWTDWGKKARIER 657
Query: 222 IGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLDFI 262
GMDG +R I+ ++ WPNGL LD +RVY+AD+K+ I
Sbjct: 658 SGMDGQHRVVIVEGDRVVWPNGLALDYVDKRVYWADAKIKSI 699
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 16/139 (11%)
Query: 129 ADLEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTN--RI 184
A +E G D + + ++V G +V GLA D++ +YW D+++ I CD G N +
Sbjct: 653 ARIERSGMDGQHRVVIVEGDRVVWPNGLALDYVDKRVYWADAKIKSIFSCDYWGKNIKTV 712
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
+ + + + P M + LF+TDW + I G++ T++ K+ P
Sbjct: 713 LHSHEYLRHPFSMAV----FEDRLFYTDWEHDGVITVNKFTGADIQTVME-KVKSP---- 763
Query: 245 LDIATRRVYFADSKLDFID 263
T R+Y ++ D
Sbjct: 764 ---MTVRIYHKQAQPKIQD 779
>gi|405960567|gb|EKC26481.1| Low-density lipoprotein receptor-related protein 6 [Crassostrea
gigas]
Length = 683
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 165/359 (45%), Gaps = 73/359 (20%)
Query: 134 KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
G D R + + DL E + D I +++ D+ N I + +GT V+ ++ +
Sbjct: 307 SGTDVRELKQLDANADL-EKIQVDPINRKLFYADTGNNLIGSINLDGTGYRVVVNQSLDE 365
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL---DIATR 250
PR + L P T+ ++WTDWG +P+IE+ DGSNR T+ ST + WPNGL D+ T
Sbjct: 366 PRDLAL--VPATQTIYWTDWGTSPKIEKASYDGSNRQTLASTGLKWPNGLAYDYEDVTTI 423
Query: 251 R--VYFADSKLDFIDCKSLEIKT-------------NVNYSTIFRKLYWIDEGGNGVPLK 295
R V ADS + I LE + ++Y + +++ D G +
Sbjct: 424 RDFVLVADSYIQEIYRMDLETGSYSAIPQYSVNTPIGIDYDPLTHTVFYSDVGLH----L 479
Query: 296 IGKANMDGSNASILV---SGQLYEALALDLENGMLYYS---------------------- 330
I ++DG+N IL S + + L +D++N +++YS
Sbjct: 480 IKSTDLDGNNEKILKRLNSVAIPDGLVIDVQNRLIFYSDTGNDVIVKMNMDGTGVVNVTN 539
Query: 331 ---------TLKCT-RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
TL + ++WTDWG +P+IE+ DGSNR T+I + + +PNGL D T
Sbjct: 540 TNLDEPRAVTLDVANQVIYWTDWGAHPKIEKSNYDGSNRQTLIDSGLKFPNGLVYDGTTN 599
Query: 381 RVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYS 439
++Y D+ + I+ + +G RQ + D G +D+++ +Y S
Sbjct: 600 KLYLCDAGTNKIEVMDTNGQNRQLIFQ-------------DAGAHFFGIDVDSQYIYVS 645
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 32/204 (15%)
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL-------- 259
+F D G I R+ ++ + I +Y P D R+YF D +L
Sbjct: 247 IFLLDTGLGGVIFRMDLNTQSYVPIPMNSLYTPTAFDYDPTDGRIYFVDYRLRQLMSVHF 306
Query: 260 ---DFIDCKSLEIKTN---VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
D + K L+ + + I RKL++ D G N IG N+DG+ ++V+
Sbjct: 307 SGTDVRELKQLDANADLEKIQVDPINRKLFYADTGNN----LIGSINLDGTGYRVVVNQS 362
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
L E L L + T+ ++WTDWG +P+IE+ DGSNR T+ ST + WPNGL
Sbjct: 363 LDEPRDLAL---------VPATQTIYWTDWGTSPKIEKASYDGSNRQTLASTGLKWPNGL 413
Query: 374 TL---DIATRR--VYFADSKLDFI 392
D+ T R V ADS + I
Sbjct: 414 AYDYEDVTTIRDFVLVADSYIQEI 437
>gi|403275750|ref|XP_003929596.1| PREDICTED: pro-epidermal growth factor [Saimiri boliviensis
boliviensis]
Length = 1169
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 137/297 (46%), Gaps = 52/297 (17%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C L C CS+ C T G LC CP G +L D TC +
Sbjct: 382 CPVGFVLLPDGKRCHQLVSCASNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SG 438
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
C P G CSQ+C + S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 439 CSSPDNGGCSQLCIPLSPVSWECDCFPGYDLQLDKKSCAA-SGPQPFLLFANSQDIRQMH 497
Query: 131 ----------LEEKGK----DH-------------------------RAQDIVVSGLDLV 151
+++ G DH + + ++ +D+
Sbjct: 498 FDGTDYGTLLIQQMGMVYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEETVDVP 557
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EGLA DWIG YW D + I D +G + ++ K+NI+QPRG+ + P + LFWT
Sbjct: 558 EGLAVDWIGRRFYWTDRGTSLIGRSDLDGKHPEIIIKENISQPRGIAVHPM--AKRLFWT 615
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
D G NPRIE + G R + S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 616 DTGINPRIESSSLQGLGRLVLASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLD 672
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/442 (25%), Positives = 177/442 (40%), Gaps = 89/442 (20%)
Query: 19 PNGADEGPGCDLAECKHKFGLCSN-TCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQP 77
P D+ + CK + G CS+ C P LCTC G LS D C+D+NEC
Sbjct: 304 PRAEDDAQKPEQKLCKSRKGNCSSIVCGQDPQSHLCTCTEGYALSRDRKYCEDVNECAFW 363
Query: 78 GY-CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD------ 130
+ C+ C NT GSY C+C G+VL D C + A+ + + +L ++
Sbjct: 364 NHGCTLGCKNTPGSYYCTCPVGFVLLPDGKRCHQLVSCASNVSECSHDCVLTSEGPLCFC 423
Query: 131 -----LEEKGK--------DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
LE GK D+ + L V D G+ LD + C
Sbjct: 424 PEGSVLERDGKTCSGCSSPDNGGCSQLCIPLSPV-SWECDCFPGYDLQLDKK-----SCA 477
Query: 178 ENGTNRIVLAKDN----------------ITQPRGMM--LDPSPGTRWLFWTDWGENPRI 219
+G +L ++ + Q GM+ LD P +++ I
Sbjct: 478 ASGPQPFLLFANSQDIRQMHFDGTDYGTLLIQQMGMVYALDHDPVENKIYFAHTALK-WI 536
Query: 220 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIF 279
ER MDGS R +I + P GL +D RR
Sbjct: 537 ERANMDGSQRERLIEETVDVPEGLAVDWIGRR---------------------------- 568
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLF 339
YW D G + IG++++DG + I++ + + + + + LF
Sbjct: 569 --FYWTDRGTS----LIGRSDLDGKHPEIIIKENISQPRGIAVH---------PMAKRLF 613
Query: 340 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
WTD G NPRIE + G R + S+ + WP+G+T+D T ++Y+ D+K I+ N DG
Sbjct: 614 WTDTGINPRIESSSLQGLGRLVLASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLDG 673
Query: 400 TGRQQVILIDLMVEFTNDLMGD 421
+ R+++ D+ F + D
Sbjct: 674 SKRRRLTQNDVGHPFAVAVFQD 695
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 66/183 (36%), Gaps = 35/183 (19%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
V G+A +WI + W + + I V D G N VL + P + +DP R+LFW
Sbjct: 118 VSGMAINWINEEVIWSNQQEGTITVTDMKGNNSHVLFS-ALKDPANIAVDPV--ERFLFW 174
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
+ + R +DG ++ T E
Sbjct: 175 SSEVAG-SLHRADLDGVEVKALLETS-------------------------------EKI 202
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
T V+ + ++L+WI G I + DG + + + A+ L ++YS
Sbjct: 203 TAVSLDVLDKRLFWIQYNNEGSNSLICSCDYDGGSVQMSKHHTEHNLFAMSLFGDHIFYS 262
Query: 331 TLK 333
T K
Sbjct: 263 TWK 265
>gi|291401276|ref|XP_002717230.1| PREDICTED: epidermal growth factor [Oryctolagus cuniculus]
Length = 1256
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 133/282 (47%), Gaps = 48/282 (17%)
Query: 29 DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQP--GYCSQMCTN 86
L C CS+ C T G LC CP G +L D TC + C P G CSQ+C
Sbjct: 449 QLVSCPSNASKCSHGCVLTSDGPLCFCPEGSVLETDGKTC---SGCSSPDNGGCSQLCVP 505
Query: 87 -TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI------------------- 126
+ S+ C C GY L+ D +C A FL+ +N I
Sbjct: 506 LSPVSWECGCLPGYDLQLDRKSCAAAG-PPPFLLFANSQDIRHMHFDGTDYETLLIQQMG 564
Query: 127 LVADLEEKGKDHR--------------------AQDIVVSGLDLVEGLAYDWIGGHIYWL 166
+V L+ +++ + ++ G+DL EGLA DWIG YW
Sbjct: 565 MVFALDHDPVENKIYFAHTALKWIERANVDGSQRERLIEDGVDLPEGLAVDWIGRRFYWT 624
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226
D + IE + +G +R ++ K NI+QPRG+ + P + LFWTD G +PRIE + G
Sbjct: 625 DRGKSVIEGSNLSGKHREIIIKKNISQPRGIAVHPV--AKRLFWTDLGISPRIESSSLQG 682
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
S+R I S+ + P+G+T+D T ++Y+ D++ I+ +L+
Sbjct: 683 SDRLIIASSDLIGPSGITIDYLTDKLYWCDAEKSTIEMANLD 724
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 167/416 (40%), Gaps = 64/416 (15%)
Query: 44 CHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGSYICSCNEGYVLE 102
C P C C G LS D +C+D+NEC + CS C NT GSY C+C G+VL
Sbjct: 382 CGAGPNFRQCACAEGYTLSRDRKSCEDVNECSFWNHGCSLGCENTPGSYYCTCPVGFVLL 441
Query: 103 YDNHTCKAINHSAAFLIISNRHSILVAD-----------LEEKGKDHRAQDIVVSG--LD 149
D C + + + +L +D LE GK +G
Sbjct: 442 PDGKRCHQLVSCPSNASKCSHGCVLTSDGPLCFCPEGSVLETDGKTCSGCSSPDNGGCSQ 501
Query: 150 LVEGLA-YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN----------------IT 192
L L+ W G + D +L+R + C G +L ++ +
Sbjct: 502 LCVPLSPVSWECGCLPGYDLQLDR-KSCAAAGPPPFLLFANSQDIRHMHFDGTDYETLLI 560
Query: 193 QPRGMM--LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
Q GM+ LD P +++ IER +DGS R +I + P GL +D R
Sbjct: 561 QQMGMVFALDHDPVENKIYFAHTALK-WIERANVDGSQRERLIEDGVDLPEGLAVDWIGR 619
Query: 251 RVYFADSKLDFIDCKSLE-------IKTNVNYS------TIFRKLYWIDEGGNGVPLKIG 297
R Y+ D I+ +L IK N++ + ++L+W D G+ +I
Sbjct: 620 RFYWTDRGKSVIEGSNLSGKHREIIIKKNISQPRGIAVHPVAKRLFWTDL---GISPRIE 676
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGS 357
+++ GS+ I+ S L + ++ Y T K L+W D E IE +DGS
Sbjct: 677 SSSLQGSDRLIIASSDLIGPSGITID-----YLTDK----LYWCD-AEKSTIEMANLDGS 726
Query: 358 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
R + + P + + V+F+D + + N TG+ +V L M++
Sbjct: 727 KRQRLAQNDVGHP--FAVAVFEDHVWFSDWAMPSVIRMNKR-TGKNRVRLRGSMLK 779
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 115/258 (44%), Gaps = 37/258 (14%)
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEG 153
SC EG + + C A FLI S+ +SI D E G +H + +V +G+ ++
Sbjct: 79 SCPEGRPEGHGHSPCLG---PAPFLIFSHGNSIFRIDPE--GTNHE-ELVVDAGVSVI-- 130
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRWL--- 208
+ + + IYW+D ++ NG+ R+ + N++ GM ++ W+
Sbjct: 131 MDFHYKEERIYWVDLERQFLQRVFLNGSRQERVCNIEKNVS---GMAIN------WINEE 181
Query: 209 -FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKL 259
W + E I M G+N ++ST + +P + +D R ++++ + L
Sbjct: 182 IIWLNQQEG-IITVTDMKGNNSYVLLST-LKYPAHIAVDPVERFIFWSSELAGSLHRADL 239
Query: 260 DFIDCKSL-EIKTNVNYST--IF-RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ + K+L EI + ++ +F ++L+WI +G ++ + DG + +
Sbjct: 240 NGVKVKTLLEIPEGIAAASLDVFDKRLFWIGHNTDGSSARMCSCDYDGGSVHCSKHQAQH 299
Query: 316 EALALDLENGMLYYSTLK 333
A+ L ++YST K
Sbjct: 300 NLFAMSLFGDRIFYSTWK 317
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQ-----PGYCSQMCTNTKGSYICSCNEGY 99
A C C G S D C D++ECE P S+ C NT+G Y+C C+EGY
Sbjct: 904 AATCQCLKG--FSGDGRLCSDIDECEMGITVCPPVSSK-CINTEGGYVCHCSEGY 955
>gi|324507361|gb|ADY43125.1| Low-density lipoprotein receptor-related protein 1B [Ascaris suum]
Length = 676
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 148/331 (44%), Gaps = 72/331 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+C+ K+CDG+ DCP G DEG C EC +G CS+ C P G LC+C GE L+
Sbjct: 240 KCIPREKLCDGRKDCPRGNDEGGRC--GECA-AYG-CSHMCTDRPDGPLCSCREGETLAF 295
Query: 64 DSVTCQDMNECEQPG--YCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA----------- 110
D C D+NECE CS C N +G + C C EGY L D H+C A
Sbjct: 296 DGRICVDVNECETAAGHICSHKCINNEGMFKCECFEGYDLGSDTHSCHAKPDPYSAIFFS 355
Query: 111 ------------------------------INHSAAFLIISNRHSILVADLEEKGKDHRA 140
+ S AF N + ++++ G H A
Sbjct: 356 LGSEVRHMPPYSVGSTIGYGTYQHNDRVGTVVRSIAFAPSFNHLLMATSNVDHIGHIHSA 415
Query: 141 ----QDIVVSGLDLVEGLAYDWIGGHIYWL---DSRLNRIEVCDENGTNRIVLAKDNITQ 193
Q +V G+ + +A DW+ ++Y+ S L + VC +G +L K ++
Sbjct: 416 SGGLQKCIVDGVKGIANIAIDWVTNNVYYTAQHPSSLTGVGVCGFDGRFCRLLVKGIVSD 475
Query: 194 P-------RGMMLDPSPGTRWLFWTDWG---ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
RG++++P ++W D ++P+I MDG+N T++STK+ P GL
Sbjct: 476 EYYRRQVYRGLVVNPVYAI--MYWIDVPGSFDSPKIMSAYMDGTNIRTLVSTKLEHPQGL 533
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
+D + +YFAD +L I+ K NVN
Sbjct: 534 AMDYIKQTLYFADVELRLIE------KVNVN 558
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 296 IGKANMDGSNASILVSG---------QLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+G DG +LV G Q+Y L ++ ++Y W+ ++
Sbjct: 455 VGVCGFDGRFCRLLVKGIVSDEYYRRQVYRGLVVNPVYAIMY--------WIDVPGSFDS 506
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
P+I MDG+N T++STK+ P GL +D + +YFAD +L I+ N + R V
Sbjct: 507 PKIMSAYMDGTNIRTLVSTKLEHPQGLAMDYIKQTLYFADVELRLIEKVNVNSHERTMV 565
>gi|357627883|gb|EHJ77414.1| hypothetical protein KGM_05660 [Danaus plexippus]
Length = 1825
Score = 129 bits (323), Expect = 4e-27, Method: Composition-based stats.
Identities = 92/320 (28%), Positives = 143/320 (44%), Gaps = 62/320 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV +CDG+ C + DE C++ EC G C + C P+G C C G LS
Sbjct: 188 CVPRRALCDGRDSCGDFTDEW-HCNINECLVLNGECGHNCTDLPVGRACWCRAGWRLSGR 246
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
C D++EC + C C NT GS++C+C+ GY L D +C ++ A LI +NR+
Sbjct: 247 G--CTDVDECREDRPCDHGCRNTPGSFVCTCSRGYRLMEDGSSCMPVSDIKASLIFTNRY 304
Query: 125 SI-LVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD-SRL------------ 170
I + +EE+ + ++V L L W G + W D +RL
Sbjct: 305 YIRRTSIVEEESSEAAVTSLLVHNLTNAVALDALWDRGCLLWSDVTRLGSSIKKLCGVTE 364
Query: 171 --------------------------------NRIEVCDE----------NGTNRIVLAK 188
+ CD+ +G +R VL +
Sbjct: 365 GEAAADAGRAGARVLAGATLQNPDGLAADWVAGNVYWCDKGTDSIEVARLDGRHRRVLLR 424
Query: 189 DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248
+ +++PR + L P G +++W+DWG + I R GMDGS S II + WPN L+L A
Sbjct: 425 EGLSEPRALALLPQQG--YMYWSDWGSSAHIGRAGMDGSGPSIIIR-GLGWPNALSLAPA 481
Query: 249 TRRVYFADSKLDFIDCKSLE 268
+ ++FAD++ D+I L+
Sbjct: 482 SGELFFADAREDYIAVADLD 501
Score = 69.3 bits (168), Expect = 4e-09, Method: Composition-based stats.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 14/119 (11%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
+YW D+G + + + A +DG + +L+ L E AL L L +++W+
Sbjct: 399 VYWCDKGTDSIEV----ARLDGRHRRVLLREGLSEPRALAL---------LPQQGYMYWS 445
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
DWG + I R GMDGS S II + WPN L+L A+ ++FAD++ D+I + DG+
Sbjct: 446 DWGSSAHIGRAGMDGSGPSIIIR-GLGWPNALSLAPASGELFFADAREDYIAVADLDGS 503
Score = 38.1 bits (87), Expect = 9.0, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 16/86 (18%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCD--------------LAECKHKFGLCSNTCHP 46
+++ C+ + CDG DC +G+DE PGC + H S C
Sbjct: 58 LSETCLQTSLYCDGDADCEDGSDEPPGCSAPVTTSTASPVGSIIPHTSHNSSFASELCAG 117
Query: 47 TPLGALC--TCPPGEILSNDSVTCQD 70
P C C P ++ + C+D
Sbjct: 118 EPGSLYCRGRCIPAALVCDGRDHCED 143
>gi|294489276|ref|NP_001170929.1| low-density lipoprotein receptor-related protein 5 [Danio rerio]
gi|260600302|gb|ACX46988.1| low density lipoprotein-related protein 6 [Danio rerio]
Length = 1430
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 150/334 (44%), Gaps = 53/334 (15%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C + G CS+ C P P C CP G L D TC+ EQ ++ + S
Sbjct: 119 CSERNGGCSHLCLLSPIPPFYSCACPTGVKLKEDGKTCRP--GAEQVLLLARRTDLRRIS 176
Query: 91 YICSCNEGYVLEY-DNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLD 149
VL+ D AI++ + L A + AQ ++ + ++
Sbjct: 177 LDLPDFTDIVLQVNDIRHAIAIDYDPVEGYVYWTDDELRAIRRARIDGSDAQTLITNEIN 236
Query: 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
+G+A DW+ ++YW D+ +RIEV NGT+R VL +N+ +PR ++LDP G +++
Sbjct: 237 HPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRRVLISENLDEPRAIVLDPING--YMY 294
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEI 269
WTDWGE P+IER +DG++R +++T + WPNGL +D ++Y+ D+K D
Sbjct: 295 WTDWGELPKIERANLDGTDRVVLLNTSLGWPNGLAIDYIAGKLYWGDAKTD--------- 345
Query: 270 KTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
KI N+DG+N ++ +L L
Sbjct: 346 -------------------------KIEVINVDGTNRMTILEDKLPHIFGFTL------- 373
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++WTDW + IER+ + S R I+
Sbjct: 374 ----LGEYIYWTDW-QRRSIERVHIANSTREVIV 402
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 117/240 (48%), Gaps = 50/240 (20%)
Query: 184 IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
IVL ++I + DP G +++WTD E I R +DGS+ T+I+ +I P+G+
Sbjct: 185 IVLQVNDIRHAIAIDYDPVEG--YVYWTD-DELRAIRRARIDGSDAQTLITNEINHPDGI 241
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
+D + R LYW D G + +I ++G
Sbjct: 242 AVDW------------------------------VARNLYWTDTGTD----RIEVTRLNG 267
Query: 304 SNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
++ +L+S L E A+ LD NG +Y WTDWGE P+IER +DG++R
Sbjct: 268 TSRRVLISENLDEPRAIVLDPINGYMY-----------WTDWGELPKIERANLDGTDRVV 316
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+++T + WPNGL +D ++Y+ D+K D I+ N DGT R ++ L F L+G+
Sbjct: 317 LLNTSLGWPNGLAIDYIAGKLYWGDAKTDKIEVINVDGTNRMTILEDKLPHIFGFTLLGE 376
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 118/245 (48%), Gaps = 24/245 (9%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
C G CS+ C P G C CP G E+LS D+ C P T +
Sbjct: 425 CAENNGGCSHLCFHRPQGLSCACPMGLELLS-------DLRTCVVP---EAFLLFTNRAD 474
Query: 92 ICSCNEGYVLEYDNHTCKAINHSAA--FLIISNRHSILVADLEEKG------KDHRAQDI 143
I S + G + ++A F ++ NR I D+ K + +
Sbjct: 475 IRSISLGTNSNDVPIPLTGVKEASALDFDVLENR--IYWTDVSTKTISRAFMNGSSVEPV 532
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ GLD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR + LDP+
Sbjct: 533 IEFGLDYPEGMAVDWMGRNLYWADTGTNRIEVARLDGQYRQVLVCKDLDNPRSLALDPAN 592
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +++WT+WG PRI R MDGSN T++ K+ NGLT+D +R+Y+ D I+
Sbjct: 593 G--YMYWTEWGGRPRIARAHMDGSNIVTLVD-KVGRANGLTIDYIDQRLYWTDLDTCMIE 649
Query: 264 CKSLE 268
+++
Sbjct: 650 STNMQ 654
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 134/310 (43%), Gaps = 51/310 (16%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D+I G +YW D++ ++IEV + +GTNR+ + +D + G L +++WTD
Sbjct: 327 GLAIDYIAGKLYWGDAKTDKIEVINVDGTNRMTILEDKLPHIFGFTL----LGEYIYWTD 382
Query: 213 WGENPRIERIGMDGSNRSTII----------STKIYWPNGLTLDIA-----TRRVYFADS 257
W + IER+ + S R I+ +TK+ G + +
Sbjct: 383 W-QRRSIERVHIANSTREVIVEQLPDLMGLKATKVMEAEGTNGCAENNGGCSHLCFHRPQ 441
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
L LE+ +++ + + + +G + D I ++G + EA
Sbjct: 442 GLSCACPMGLELLSDLRTCVVPEAFLLFTNRADIRSISLGTNSND---VPIPLTG-VKEA 497
Query: 318 LALD---LENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
ALD LEN ++WTD I R M+GS+ +I + +P G+
Sbjct: 498 SALDFDVLENR------------IYWTDVSTK-TISRAFMNGSSVEPVIEFGLDYPEGMA 544
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENG 434
+D R +Y+AD+ + I+ DG RQ ++ DL + +LALD NG
Sbjct: 545 VDWMGRNLYWADTGTNRIEVARLDGQYRQVLVCKDL-----------DNPRSLALDPANG 593
Query: 435 MLYYSTEGAE 444
+Y++ G
Sbjct: 594 YMYWTEWGGR 603
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 126/342 (36%), Gaps = 101/342 (29%)
Query: 75 EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK 134
E G CS +C + C+C G L D TC AFL+ +NR I L
Sbjct: 427 ENNGGCSHLCFHRPQGLSCACPMGLELLSDLRTCVV---PEAFLLFTNRADIRSISL--- 480
Query: 135 GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
G + I ++G+ L +D + NRI
Sbjct: 481 GTNSNDVPIPLTGVKEASALDFDVL---------------------ENRI---------- 509
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
+WTD I R M+GS+ +I + +P G+ +D
Sbjct: 510 --------------YWTDVSTK-TISRAFMNGSSVEPVIEFGLDYPEGMAVDW------- 547
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
+ R LYW D G N +I A +DG +LV L
Sbjct: 548 -----------------------MGRNLYWADTGTN----RIEVARLDGQYRQVLVCKDL 580
Query: 315 --YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372
+LALD NG +Y WT+WG PRI R MDGSN T++ K+ NG
Sbjct: 581 DNPRSLALDPANGYMY-----------WTEWGGRPRIARAHMDGSNIVTLVD-KVGRANG 628
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
LT+D +R+Y+ D I+ N R +++ DL F
Sbjct: 629 LTIDYIDQRLYWTDLDTCMIESTNMQSLQR-EIVADDLPHPF 669
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 354 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
MDGSNR I+ +IYWPNGLT+D+ +++Y+AD+KL FI N DGT R+ V+ L
Sbjct: 1 MDGSNRQIIVQKQIYWPNGLTIDLDEQKLYWADAKLSFIHRANLDGTSREAVVEGSLTHP 60
Query: 414 FT 415
F
Sbjct: 61 FA 62
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 54/120 (45%), Gaps = 45/120 (37%)
Query: 224 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLY 283
MDGSNR I+ +IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 1 MDGSNRQIIVQKQIYWPNGLTIDLDEQKLYWADAKLSFIH-------------------- 40
Query: 284 WIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
+AN+DG++ +V G L AL L + LY WTDW
Sbjct: 41 --------------RANLDGTSREAVVEGSLTHPFALTLYDETLY-----------WTDW 75
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 132/338 (39%), Gaps = 56/338 (16%)
Query: 59 EILSNDSVTCQDMNECEQP-GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S N+C Q G C+ +C + C C Y LE + C + ++F
Sbjct: 711 DILVFHSSRQDGANDCSQNNGQCAHLCLASPSGAQCRCASHYTLEANGRNCSS---PSSF 767
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L+ S + SI L E+ D V+ L +++D + +YW+D R N D
Sbjct: 768 LLFSQKSSISRMVLGEQSPDMILPIHVMKNL---RAISFDPLERLVYWVDGRQNIRRSRD 824
Query: 178 ENGTNRIVLA--KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST 235
+ V+ D+ QP + LDP +R ++WT N I MDG ++
Sbjct: 825 DGTQASTVMTPNSDHPKQPHDLSLDPY--SRTVYWTCETTN-TINIHRMDGHVIGEVLKD 881
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
+ P + ++ +YF T V + K
Sbjct: 882 DVDKPRAIVVNAEKGYMYF----------------TTVQERSA----------------K 909
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
I A++DG+ L + L +AL L+N + LFW D + RIE +
Sbjct: 910 IEGASLDGTERESLFTTSLIRPVALALDNKLGK---------LFWVD-ADLKRIESSDLS 959
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
G+NR + + I P GLT + +Y+ D + I+
Sbjct: 960 GANRIVLQDSNILQPVGLT--VLGDHLYWIDKQQQMIE 995
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
LA D G ++W+D+ L RIE D +G NRIVL NI QP G+ + L+W D
Sbjct: 933 ALALDNKLGKLFWVDADLKRIESSDLSGANRIVLQDSNILQPVGLTV----LGDHLYWID 988
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ + T I ++ + G+
Sbjct: 989 -KQQQMIERVDKLTGEKRTRIQGRLQYLTGI 1018
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 89/218 (40%), Gaps = 51/218 (23%)
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII---STKIYWPNGLTLDIATRR 251
R + DP R ++W D +N I R DG+ ST++ S P+ L+LD +R
Sbjct: 799 RAISFDPL--ERLVYWVDGRQN--IRRSRDDGTQASTVMTPNSDHPKQPHDLSLDPYSRT 854
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
VY+ + I+ ++ IG+ D +
Sbjct: 855 VYWTCETTNTINIHRMDGHV------------------------IGEVLKDDVDKP---- 886
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
A+ ++ E G +Y++T++ + +IE +DG+ R ++ +T + P
Sbjct: 887 ----RAIVVNAEKGYMYFTTVQ----------ERSAKIEGASLDGTERESLFTTSLIRPV 932
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
L LD ++++ D+ L I+ + G R ++L D
Sbjct: 933 ALALDNKLGKLFWVDADLKRIESSDLSGANR--IVLQD 968
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 16/129 (12%)
Query: 301 MDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSN 358
MDGSN I+V Q+Y L +DL+ LY++ K + I R +DG++
Sbjct: 1 MDGSNRQIIVQKQIYWPNGLTIDLDEQKLYWADAKLS------------FIHRANLDGTS 48
Query: 359 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
R ++ + P LTL T +Y+ D + I CN + + IL + +
Sbjct: 49 REAVVEGSLTHPFALTLYDET--LYWTDWQTRSIHACNKHSGEKHREILNGIYSPMDIQV 106
Query: 419 MGDNGVPAL 427
+G P +
Sbjct: 107 LGQERQPNI 115
>gi|345322054|ref|XP_001508455.2| PREDICTED: low-density lipoprotein receptor-related protein 6
[Ornithorhynchus anatinus]
Length = 1502
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 144/329 (43%), Gaps = 93/329 (28%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI--------- 126
G CS +C +K Y C+C G L D TCK + + L+++ R +
Sbjct: 180 GGCSHLCLMAPSKPFYQCACATGVRLLEDGKTCK--DGATELLLLARRTDLRRISLDTPD 237
Query: 127 ---LVADLEE------------------KGKDHRA-----------QDIVVSGLDLVEGL 154
+V LE+ + RA Q +V + + +G+
Sbjct: 238 FTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFLDGSGSQFVVTAQIAHPDGI 297
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++LDP+ G +++WTDWG
Sbjct: 298 AVDWVARNLYWTDTGTDRIEVTRLNGTLRKILISEDLEEPRAIVLDPTAG--YMYWTDWG 355
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
ENP+IER +DGS+R+ +++T + WPNGL LD ++Y+ D+K D
Sbjct: 356 ENPKIERAALDGSDRTVLVNTSLGWPNGLALDYDEGKIYWGDAKTD-------------- 401
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
KI N DGS +LV ++ L +Y
Sbjct: 402 --------------------KIEVMNADGSGRRVLVEDKIPHIFGFTLLGDYVY------ 435
Query: 335 TRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ + R II
Sbjct: 436 -----WTDW-QRRSIERVHKQNAEREIII 458
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 121/242 (50%), Gaps = 20/242 (8%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTC---QDMNECEQPGYCSQMCTNTKG 89
C + G CS+ C P G C CP G L +D TC + + ++ T
Sbjct: 481 CAEENGGCSHLCLYRPQGLRCACPIGLELISDMKTCIVPEAFLLFSRRADIRRISLETNN 540
Query: 90 SYIC----SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVV 145
+ + E L++D + + + + +I A + +H +V
Sbjct: 541 NNVAIPLTGVKEASALDFD------VTDNRIYWTDISLKTISRAFMNGSALEH----VVE 590
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
GLD EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G
Sbjct: 591 FGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG- 649
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+++WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+
Sbjct: 650 -FMYWTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESS 707
Query: 266 SL 267
++
Sbjct: 708 NM 709
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 61/86 (70%)
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
R+++WTDWGE P+IER GMDGS+R II+T IYWPNGLTLD R++Y+AD+KL+FI
Sbjct: 39 RYMYWTDWGEVPKIERAGMDGSSRHVIINTDIYWPNGLTLDYKERKLYWADAKLNFIHKS 98
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DGT RQ V+ L F L D
Sbjct: 99 NLDGTDRQAVVKGSLPHPFALTLFED 124
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 70/138 (50%), Gaps = 45/138 (32%)
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
R+++WTDWGE P+IER GMDGS+R II+T IYWPNGLTLD R++Y+AD+KL+FI
Sbjct: 39 RYMYWTDWGEVPKIERAGMDGSSRHVIINTDIYWPNGLTLDYKERKLYWADAKLNFIH-- 96
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
K+N+DG++ +V G L AL L
Sbjct: 97 --------------------------------KSNLDGTDRQAVVKGSLPHPFALTLFED 124
Query: 326 MLYYSTLKCTRWLFWTDW 343
LY WTDW
Sbjct: 125 TLY-----------WTDW 131
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 531 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 590
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 591 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 646
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 647 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 694
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 695 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 725
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 151/357 (42%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC+A FL+ S +++I
Sbjct: 780 NECAASNGHCSHLCLAVPVGGFVCGCPAHYSLNPDNRTCRA---PTTFLLFSQKNAINRM 836
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ + +
Sbjct: 837 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNIIRKAQEDGSQSLTVV 892
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG ++ + P
Sbjct: 893 VSSVPNQNLDMQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRPVGVVLKGEQDRPR 949
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 950 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 977
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 978 DGTEREVLFFSGLSKPVALALDSQLGK---------LFWAD-SDLRRIESSDLSGANRIV 1027
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1028 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARISQLSDI 1080
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 139/345 (40%), Gaps = 68/345 (19%)
Query: 128 VADLEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL 186
V +E G D ++ +++ + + GL D+ +YW D++LN I + +GT+R +
Sbjct: 49 VPKIERAGMDGSSRHVIINTDIYWPNGLTLDYKERKLYWADAKLNFIHKSNLDGTDRQAV 108
Query: 187 AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 246
K ++ P + L L+WTDW N +I++ Y GL
Sbjct: 109 VKGSLPHPFALTLFEDT----LYWTDW--------------NTHSILACNKYTGEGL--- 147
Query: 247 IATRRVYFADSKLDFIDCKSLEIKTNVNYST---------------IFRKLYWIDEGGNG 291
R ++ + +D + K N + K ++ G
Sbjct: 148 ---REIH--SNIFSPMDIHAFSQKRQPNATNPCGTNNGGCSHLCLMAPSKPFYQCACATG 202
Query: 292 VP-LKIGKANMDGSNASILVSGQL-YEALALDLENGMLYYSTLKCTR------------W 337
V L+ GK DG+ +L++ + ++LD + L+ R +
Sbjct: 203 VRLLEDGKTCKDGATELLLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGY 262
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
++WTD E I R +DGS +++ +I P+G+ +D R +Y+ D+ D I+
Sbjct: 263 IYWTD-DEVRAIRRSFLDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRL 321
Query: 398 DGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+GT R+ +I DL A+ LD G +Y++ G
Sbjct: 322 NGTLRKILISEDL-----------EEPRAIVLDPTAGYMYWTDWG 355
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 662 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 720
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 721 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 775
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 776 QAGWNECAASNGHCSHLCLAVPVGGFVCGCPAHYSLNPDNRTCRAPTTFLLFSQKNAINR 835
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 836 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-IIRKAQEDGSQSLTVV 892
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 893 VSSVPNQNLDMQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRPVGVV------------ 940
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 941 LKGEQDRPRAIVVNPEKGYMYFT 963
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 20/129 (15%)
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTRW 337
R +YW D G VP KI +A MDGS+ ++++ +Y L LD + R
Sbjct: 39 RYMYWTDWGE--VP-KIERAGMDGSSRHVIINTDIYWPNGLTLDYKE-----------RK 84
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN- 396
L+W D N I + +DG++R ++ + P LTL T +Y+ D I CN
Sbjct: 85 LYWADAKLN-FIHKSNLDGTDRQAVVKGSLPHPFALTLFEDT--LYWTDWNTHSILACNK 141
Query: 397 YDGTGRQQV 405
Y G G +++
Sbjct: 142 YTGEGLREI 150
>gi|50801|emb|CAA24115.1| unnamed protein product [Mus musculus]
Length = 1217
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 148/325 (45%), Gaps = 60/325 (18%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C +L C CS+ C T G C CP G +L D TC
Sbjct: 388 CPTGFVLLPDGKQCHELVSCPGNVSKCSHGCVLTSDGPRCICPAGSVLGRDGKTC---TG 444
Query: 74 CEQP--GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN---RH--- 124
C P G CSQ+C + GS+ C C GY L+ D +C A L ++ RH
Sbjct: 445 CSSPDNGGCSQICLPLRPGSWECDCFPGYDLQSDRKSCAASGPQPLLLFANSQDIRHMHF 504
Query: 125 -----SILVAD--------------------------LEEKGKD-HRAQDIVVSGLDLVE 152
+L++ +E D + + ++ G+D +E
Sbjct: 505 DGTDYKVLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANMDGSQRERLITEGVDTLE 564
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA DWIG IYW DS + + D +G + ++ ++ I++PRG+ + P R LFWTD
Sbjct: 565 GLALDWIGRRIYWTDSGKSVVGGSDLSGKHHRIIIQERISRPRGIAVHPR--ARRLFWTD 622
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE---- 268
G +PRIE + GS+R I S+ + P+G+T+D T +Y+ D+K I+ +L+
Sbjct: 623 VGMSPRIESASLQGSDRVLIASSNLLEPSGITIDYLTDTLYWCDTKRSVIEMANLDGSKR 682
Query: 269 ---IKTNVNYS---TIFRKLYWIDE 287
I+ +V + +F W+ +
Sbjct: 683 RRLIQNDVGHPFSLAVFEDHLWVSD 707
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 26/217 (11%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST- 277
I + DG++ ++S ++ L D ++YFA + L +I+ +++ T
Sbjct: 499 IRHMHFDGTDYKVLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANMDGSQRERLITE 558
Query: 278 ------------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
I R++YW D G + +G +++ G + I++ ++ + +
Sbjct: 559 GVDTLEGLALDWIGRRIYWTDSGKS----VVGGSDLSGKHHRIIIQERISRPRGIAVHPR 614
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
R LFWTD G +PRIE + GS+R I S+ + P+G+T+D T +Y+
Sbjct: 615 ---------ARRLFWTDVGMSPRIESASLQGSDRVLIASSNLLEPSGITIDYLTDTLYWC 665
Query: 386 DSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
D+K I+ N DG+ R+++I D+ F+ + D+
Sbjct: 666 DTKRSVIEMANLDGSKRRRLIQNDVGHPFSLAVFEDH 702
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 36 KFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGSYICS 94
+FGLC P C G LS D C+D+NEC + C+ C NT GSY C+
Sbjct: 332 RFGLCERD----PKSHSSACAEGYTLSRDRKYCEDVNECATQNHGCTLGCENTPGSYHCT 387
Query: 95 CNEGYVLEYDNHTCKAI 111
C G+VL D C +
Sbjct: 388 CPTGFVLLPDGKQCHEL 404
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 71/183 (38%), Gaps = 36/183 (19%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
V GLA DWI + W+D + I V D G N VL ++ P + +DP R +FW
Sbjct: 125 VSGLAIDWIDDEVLWVDQQNGVITVTDMTGKNSRVLLS-SLKHPSNIAVDPI--ERLMFW 181
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
+ + R + G + T++ T + LTLD+ +R
Sbjct: 182 SSEVTG-SLHRAHLKGVDVKTLLETGGI--SVLTLDVLDKR------------------- 219
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
L+W+ + G G I + +G + ++ + ++ ++YS
Sbjct: 220 -----------LFWVQDSGEGSHAYIHSCDYEGGSVRLIRHQARHSLSSMAFFGDRIFYS 268
Query: 331 TLK 333
LK
Sbjct: 269 VLK 271
>gi|38174492|gb|AAH60741.1| Epidermal growth factor [Mus musculus]
gi|62185775|gb|AAH92277.1| Epidermal growth factor [Mus musculus]
Length = 1217
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 148/325 (45%), Gaps = 60/325 (18%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C +L C CS+ C T G C CP G +L D TC
Sbjct: 388 CPTGFVLLPDGKQCHELVSCPGNVSKCSHGCVLTSDGPRCICPAGSVLGRDGKTC---TG 444
Query: 74 CEQP--GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN---RH--- 124
C P G CSQ+C + GS+ C C GY L+ D +C A L ++ RH
Sbjct: 445 CSSPDNGGCSQICLPLRPGSWECDCFPGYDLQSDRKSCAASGPQPLLLFANSQDIRHMHF 504
Query: 125 -----SILVAD--------------------------LEEKGKD-HRAQDIVVSGLDLVE 152
+L++ +E D + + ++ G+D +E
Sbjct: 505 DGTDYKVLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANMDGSQRERLITEGVDTLE 564
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA DWIG IYW DS + + D +G + ++ ++ I++PRG+ + P R LFWTD
Sbjct: 565 GLALDWIGRRIYWTDSGKSVVGGSDLSGKHHRIIIQERISRPRGIAVHPR--ARRLFWTD 622
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE---- 268
G +PRIE + GS+R I S+ + P+G+T+D T +Y+ D+K I+ +L+
Sbjct: 623 VGMSPRIESASLQGSDRVLIASSNLLEPSGITIDYLTDTLYWCDTKRSVIEMANLDGSKR 682
Query: 269 ---IKTNVNYS---TIFRKLYWIDE 287
I+ +V + +F W+ +
Sbjct: 683 RRLIQNDVGHPFSLAVFEDHLWVSD 707
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 26/217 (11%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST- 277
I + DG++ ++S ++ L D ++YFA + L +I+ +++ T
Sbjct: 499 IRHMHFDGTDYKVLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANMDGSQRERLITE 558
Query: 278 ------------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
I R++YW D G + +G +++ G + I++ ++ + +
Sbjct: 559 GVDTLEGLALDWIGRRIYWTDSGKS----VVGGSDLSGKHHRIIIQERISRPRGIAVHPR 614
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
R LFWTD G +PRIE + GS+R I S+ + P+G+T+D T +Y+
Sbjct: 615 ---------ARRLFWTDVGMSPRIESASLQGSDRVLIASSNLLEPSGITIDYLTDTLYWC 665
Query: 386 DSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
D+K I+ N DG+ R+++I D+ F+ + D+
Sbjct: 666 DTKRSVIEMANLDGSKRRRLIQNDVGHPFSLAVFEDH 702
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 36 KFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGSYICS 94
+FGLC P C G LS D C+D+NEC + C+ C NT GSY C+
Sbjct: 332 RFGLCERD----PKSHSSACAEGYTLSRDRKYCEDVNECATQNHGCTLGCENTPGSYHCT 387
Query: 95 CNEGYVLEYDNHTCKAI 111
C G+VL D C +
Sbjct: 388 CPTGFVLLPDGKQCHEL 404
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 71/183 (38%), Gaps = 36/183 (19%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
V GLA DWI + W+D + I V D G N VL ++ P + +DP R +FW
Sbjct: 125 VSGLAIDWIDDEVLWVDQQNGVITVTDMTGKNSRVLLS-SLKHPSNIAVDPI--ERLMFW 181
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
+ + R + G + T++ T + LTLD+ +R
Sbjct: 182 SSEVTG-SLHRAHLKGVDVKTLLETGGI--SVLTLDVLDKR------------------- 219
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
L+W+ + G G I + +G + ++ + ++ ++YS
Sbjct: 220 -----------LFWVQDSGEGSHAYIHSCDYEGGSVRLIRHQARHSLSSMAFFGDRIFYS 268
Query: 331 TLK 333
LK
Sbjct: 269 VLK 271
>gi|309210|gb|AAA37539.1| prepro-egf [Mus musculus]
Length = 1217
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 148/325 (45%), Gaps = 60/325 (18%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C +L C CS+ C T G C CP G +L D TC
Sbjct: 388 CPTGFVLLPDGKQCHELVSCPGNVSKCSHGCVLTSDGPRCICPAGSVLGRDGKTC---TG 444
Query: 74 CEQP--GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN---RH--- 124
C P G CSQ+C + GS+ C C GY L+ D +C A L ++ RH
Sbjct: 445 CSSPDNGGCSQICLPLRPGSWECDCFPGYDLQSDRKSCAASGPQPLLLFANSQDIRHMHF 504
Query: 125 -----SILVAD--------------------------LEEKGKD-HRAQDIVVSGLDLVE 152
+L++ +E D + + ++ G+D +E
Sbjct: 505 DGTDYKVLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANMDGSQRERLITEGVDTLE 564
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA DWIG IYW DS + + D +G + ++ ++ I++PRG+ + P R LFWTD
Sbjct: 565 GLALDWIGRRIYWTDSGKSVVGGSDLSGKHHRIIIQERISRPRGIAVHPR--ARRLFWTD 622
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE---- 268
G +PRIE + GS+R I S+ + P+G+T+D T +Y+ D+K I+ +L+
Sbjct: 623 VGMSPRIESASLQGSDRVLIASSNLLEPSGITIDYLTDTLYWCDTKRSVIEMANLDGSKR 682
Query: 269 ---IKTNVNYS---TIFRKLYWIDE 287
I+ +V + +F W+ +
Sbjct: 683 RRLIQNDVGHPFSLAVFEDHLWVSD 707
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 26/217 (11%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST- 277
I + DG++ ++S ++ L D ++YFA + L +I+ +++ T
Sbjct: 499 IRHMHFDGTDYKVLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANMDGSQRERLITE 558
Query: 278 ------------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
I R++YW D G + +G +++ G + I++ ++ + +
Sbjct: 559 GVDTLEGLALDWIGRRIYWTDSGKS----VVGGSDLSGKHHRIIIQERISRPRGIAVHPR 614
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
R LFWTD G +PRIE + GS+R I S+ + P+G+T+D T +Y+
Sbjct: 615 ---------ARRLFWTDVGMSPRIESASLQGSDRVLIASSNLLEPSGITIDYLTDTLYWC 665
Query: 386 DSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
D+K I+ N DG+ R+++I D+ F+ + D+
Sbjct: 666 DTKRSVIEMANLDGSKRRRLIQNDVGHPFSLAVFEDH 702
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 36 KFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGSYICS 94
+FGLC P C G LS D C+D+NEC + C+ C NT GSY C+
Sbjct: 332 RFGLCERD----PKSHSSACAEGYTLSRDRKYCEDVNECATQNHGCTLGCENTPGSYHCT 387
Query: 95 CNEGYVLEYDNHTCKAI 111
C G+VL D C +
Sbjct: 388 CPTGFVLLPDGKQCHEL 404
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 71/183 (38%), Gaps = 36/183 (19%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
V GLA DWI + W+D + I V D G N VL ++ P + +DP R +FW
Sbjct: 125 VSGLAIDWIDDEVLWVDQQNGVITVTDMTGKNSRVLLS-SLKHPSNIAVDPI--ERLMFW 181
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
+ + R + G + T++ T + LTLD+ +R
Sbjct: 182 SSEVTG-SLHRAHLKGVDVKTLLETGGI--SVLTLDVLDKR------------------- 219
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
L+W+ + G G I + +G + ++ + ++ ++YS
Sbjct: 220 -----------LFWVQDSGEGSHAYIHSCDYEGGSVRLIRHQARHSLSSMAFFGDRIFYS 268
Query: 331 TLK 333
LK
Sbjct: 269 VLK 271
>gi|148680290|gb|EDL12237.1| epidermal growth factor, isoform CRA_a [Mus musculus]
Length = 1132
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 148/325 (45%), Gaps = 60/325 (18%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C +L C CS+ C T G C CP G +L D TC
Sbjct: 303 CPTGFVLLPDGKQCHELVSCPGNVSKCSHGCVLTSDGPRCICPAGSVLGRDGKTC---TG 359
Query: 74 CEQP--GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN---RH--- 124
C P G CSQ+C + GS+ C C GY L+ D +C A L ++ RH
Sbjct: 360 CSSPDNGGCSQICLPLRPGSWECDCFPGYDLQSDRKSCAASGPQPLLLFANSQDIRHMHF 419
Query: 125 -----SILVAD--------------------------LEEKGKD-HRAQDIVVSGLDLVE 152
+L++ +E D + + ++ G+D +E
Sbjct: 420 DGTDYKVLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANMDGSQRERLITEGVDTLE 479
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA DWIG IYW DS + + D +G + ++ ++ I++PRG+ + P R LFWTD
Sbjct: 480 GLALDWIGRRIYWTDSGKSVVGGSDLSGKHHRIIIQERISRPRGIAVHPR--ARRLFWTD 537
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE---- 268
G +PRIE + GS+R I S+ + P+G+T+D T +Y+ D+K I+ +L+
Sbjct: 538 VGMSPRIESASLQGSDRVLIASSNLLEPSGITIDYLTDTLYWCDTKRSVIEMANLDGSKR 597
Query: 269 ---IKTNVNYS---TIFRKLYWIDE 287
I+ +V + +F W+ +
Sbjct: 598 RRLIQNDVGHPFSLAVFEDHLWVSD 622
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 26/217 (11%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST- 277
I + DG++ ++S ++ L D ++YFA + L +I+ +++ T
Sbjct: 414 IRHMHFDGTDYKVLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANMDGSQRERLITE 473
Query: 278 ------------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
I R++YW D G + +G +++ G + I++ ++ + +
Sbjct: 474 GVDTLEGLALDWIGRRIYWTDSGKS----VVGGSDLSGKHHRIIIQERISRPRGIAVHPR 529
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
R LFWTD G +PRIE + GS+R I S+ + P+G+T+D T +Y+
Sbjct: 530 ---------ARRLFWTDVGMSPRIESASLQGSDRVLIASSNLLEPSGITIDYLTDTLYWC 580
Query: 386 DSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
D+K I+ N DG+ R+++I D+ F+ + D+
Sbjct: 581 DTKRSVIEMANLDGSKRRRLIQNDVGHPFSLAVFEDH 617
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 36 KFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGSYICS 94
+FGLC P C G LS D C+D+NEC + C+ C NT GSY C+
Sbjct: 247 RFGLCERD----PKSHSSACAEGYTLSRDRKYCEDVNECATQNHGCTLGCENTPGSYHCT 302
Query: 95 CNEGYVLEYDNHTCKAI 111
C G+VL D C +
Sbjct: 303 CPTGFVLLPDGKQCHEL 319
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 71/183 (38%), Gaps = 36/183 (19%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
V GLA DWI + W+D + I V D G N VL ++ P + +DP R +FW
Sbjct: 40 VSGLAIDWIDDEVLWVDQQNGVITVTDMTGKNSRVLLS-SLKHPSNIAVDPI--ERLMFW 96
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
+ + R + G + T++ T + LTLD+ +R
Sbjct: 97 SSEVTG-SLHRAHLKGVDVKTLLETGGI--SVLTLDVLDKR------------------- 134
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
L+W+ + G G I + +G + ++ + ++ ++YS
Sbjct: 135 -----------LFWVQDSGEGSHAYIHSCDYEGGSVRLIRHQARHSLSSMAFFGDRIFYS 183
Query: 331 TLK 333
LK
Sbjct: 184 VLK 186
>gi|223684|prf||0907234A epidermal growth factor precursor
Length = 1168
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 148/325 (45%), Gaps = 60/325 (18%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C +L C CS+ C T G C CP G +L D TC
Sbjct: 388 CPTGFVLLPDGKQCHELVSCPGNVSKCSHGCVLTSDGPRCICPAGSVLGRDGKTC---TG 444
Query: 74 CEQP--GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN---RH--- 124
C P G CSQ+C + GS+ C C GY L+ D +C A L ++ RH
Sbjct: 445 CSSPDNGGCSQICLPLRPGSWECDCFPGYDLQSDRKSCAASGPQPLLLFANSQDIRHMHF 504
Query: 125 -----SILVAD--------------------------LEEKGKD-HRAQDIVVSGLDLVE 152
+L++ +E D + + ++ G+D +E
Sbjct: 505 DGTDYKVLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANMDGSQRERLITEGVDTLE 564
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA DWIG IYW DS + + D +G + ++ ++ I++PRG+ + P R LFWTD
Sbjct: 565 GLALDWIGRRIYWTDSGKSVVGGSDLSGKHHRIIIQERISRPRGIAVHPR--ARRLFWTD 622
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE---- 268
G +PRIE + GS+R I S+ + P+G+T+D T +Y+ D+K I+ +L+
Sbjct: 623 VGMSPRIESASLQGSDRVLIASSNLLEPSGITIDYLTDTLYWCDTKRSVIEMANLDGSKR 682
Query: 269 ---IKTNVNYS---TIFRKLYWIDE 287
I+ +V + +F W+ +
Sbjct: 683 RRLIQNDVGHPFSLAVFEDHLWVSD 707
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 26/217 (11%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST- 277
I + DG++ ++S ++ L D ++YFA + L +I+ +++ T
Sbjct: 499 IRHMHFDGTDYKVLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANMDGSQRERLITE 558
Query: 278 ------------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
I R++YW D G + +G +++ G + I++ ++ + +
Sbjct: 559 GVDTLEGLALDWIGRRIYWTDSGKS----VVGGSDLSGKHHRIIIQERISRPRGIAVHPR 614
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
R LFWTD G +PRIE + GS+R I S+ + P+G+T+D T +Y+
Sbjct: 615 ---------ARRLFWTDVGMSPRIESASLQGSDRVLIASSNLLEPSGITIDYLTDTLYWC 665
Query: 386 DSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
D+K I+ N DG+ R+++I D+ F+ + D+
Sbjct: 666 DTKRSVIEMANLDGSKRRRLIQNDVGHPFSLAVFEDH 702
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 36 KFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGSYICS 94
+FGLC P C G LS D C+D+NEC + C+ C NT GSY C+
Sbjct: 332 RFGLCERD----PKSHSSACAEGYTLSRDRKYCEDVNECATQNHGCTLGCENTPGSYHCT 387
Query: 95 CNEGYVLEYDNHTCKAI 111
C G+VL D C +
Sbjct: 388 CPTGFVLLPDGKQCHEL 404
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 71/183 (38%), Gaps = 36/183 (19%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
V GLA DWI + W+D + I V D G N VL ++ P + +DP R +FW
Sbjct: 125 VSGLAIDWIDDEVLWVDQQNGVITVTDMTGKNSRVLLS-SLKHPSNIAVDPI--ERLMFW 181
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
+ + R + G + T++ T + LTLD+ +R
Sbjct: 182 SSEVTG-SLHRAHLKGVDVKTLLETGGI--SVLTLDVLDKR------------------- 219
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
L+W+ + G G I + +G + ++ + ++ ++YS
Sbjct: 220 -----------LFWVQDSGEGSHAYIHSCDYEGGSVRLIRHQARHSLSSMAFFGDRIFYS 268
Query: 331 TLK 333
LK
Sbjct: 269 VLK 271
>gi|17389248|gb|AAH17681.1| Egf protein [Mus musculus]
Length = 1200
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 148/325 (45%), Gaps = 60/325 (18%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C +L C CS+ C T G C CP G +L D TC
Sbjct: 371 CPTGFVLLPDGKQCHELVSCPGNVSKCSHGCVLTSDGPRCICPAGSVLGRDGKTC---TG 427
Query: 74 CEQP--GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN---RH--- 124
C P G CSQ+C + GS+ C C GY L+ D +C A L ++ RH
Sbjct: 428 CSSPDNGGCSQICLPLRPGSWECDCFPGYDLQSDRKSCAASGPQPLLLFANSQDIRHMHF 487
Query: 125 -----SILVAD--------------------------LEEKGKD-HRAQDIVVSGLDLVE 152
+L++ +E D + + ++ G+D +E
Sbjct: 488 DGTDYKVLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANMDGSQRERLITEGVDTLE 547
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA DWIG IYW DS + + D +G + ++ ++ I++PRG+ + P R LFWTD
Sbjct: 548 GLALDWIGRRIYWTDSGKSVVGGSDLSGKHHRIIIQERISRPRGIAVHPR--ARRLFWTD 605
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE---- 268
G +PRIE + GS+R I S+ + P+G+T+D T +Y+ D+K I+ +L+
Sbjct: 606 VGMSPRIESASLQGSDRVLIASSNLLEPSGITIDYLTDTLYWCDTKRSVIEMANLDGSKR 665
Query: 269 ---IKTNVNYS---TIFRKLYWIDE 287
I+ +V + +F W+ +
Sbjct: 666 RRLIQNDVGHPFSLAVFEDHLWVSD 690
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 26/217 (11%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST- 277
I + DG++ ++S ++ L D ++YFA + L +I+ +++ T
Sbjct: 482 IRHMHFDGTDYKVLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANMDGSQRERLITE 541
Query: 278 ------------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
I R++YW D G + +G +++ G + I++ ++ + +
Sbjct: 542 GVDTLEGLALDWIGRRIYWTDSGKS----VVGGSDLSGKHHRIIIQERISRPRGIAVHPR 597
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
R LFWTD G +PRIE + GS+R I S+ + P+G+T+D T +Y+
Sbjct: 598 ---------ARRLFWTDVGMSPRIESASLQGSDRVLIASSNLLEPSGITIDYLTDTLYWC 648
Query: 386 DSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
D+K I+ N DG+ R+++I D+ F+ + D+
Sbjct: 649 DTKRSVIEMANLDGSKRRRLIQNDVGHPFSLAVFEDH 685
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 36 KFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGSYICS 94
+FGLC P C G LS D C+D+NEC + C+ C NT GSY C+
Sbjct: 315 RFGLCERD----PKSHSSACAEGYTLSRDRKYCEDVNECATQNHGCTLGCENTPGSYHCT 370
Query: 95 CNEGYVLEYDNHTCKAI 111
C G+VL D C +
Sbjct: 371 CPTGFVLLPDGKQCHEL 387
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 71/183 (38%), Gaps = 36/183 (19%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
V GLA DWI + W+D + I V D G N VL ++ P + +DP R +FW
Sbjct: 108 VSGLAIDWIDDEVLWVDQQNGVITVTDMTGKNSRVLLS-SLKHPSNIAVDPI--ERLMFW 164
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
+ + R + G + T++ T + LTLD+ +R
Sbjct: 165 SSEVTG-SLHRAHLKGVDVKTLLETGGI--SVLTLDVLDKR------------------- 202
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
L+W+ + G G I + +G + ++ + ++ ++YS
Sbjct: 203 -----------LFWVQDSGEGSHAYIHSCDYEGGSVRLIRHQARHSLSSMAFFGDRIFYS 251
Query: 331 TLK 333
LK
Sbjct: 252 VLK 254
>gi|170172524|ref|NP_034243.2| pro-epidermal growth factor precursor [Mus musculus]
gi|341940478|sp|P01132.2|EGF_MOUSE RecName: Full=Pro-epidermal growth factor; Short=EGF; Contains:
RecName: Full=Epidermal growth factor; Flags: Precursor
Length = 1217
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 148/325 (45%), Gaps = 60/325 (18%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C +L C CS+ C T G C CP G +L D TC
Sbjct: 388 CPTGFVLLPDGKQCHELVSCPGNVSKCSHGCVLTSDGPRCICPAGSVLGRDGKTC---TG 444
Query: 74 CEQP--GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN---RH--- 124
C P G CSQ+C + GS+ C C GY L+ D +C A L ++ RH
Sbjct: 445 CSSPDNGGCSQICLPLRPGSWECDCFPGYDLQSDRKSCAASGPQPLLLFANSQDIRHMHF 504
Query: 125 -----SILVAD--------------------------LEEKGKD-HRAQDIVVSGLDLVE 152
+L++ +E D + + ++ G+D +E
Sbjct: 505 DGTDYKVLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANMDGSQRERLITEGVDTLE 564
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA DWIG IYW DS + + D +G + ++ ++ I++PRG+ + P R LFWTD
Sbjct: 565 GLALDWIGRRIYWTDSGKSVVGGSDLSGKHHRIIIQERISRPRGIAVHPR--ARRLFWTD 622
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE---- 268
G +PRIE + GS+R I S+ + P+G+T+D T +Y+ D+K I+ +L+
Sbjct: 623 VGMSPRIESASLQGSDRVLIASSNLLEPSGITIDYLTDTLYWCDTKRSVIEMANLDGSKR 682
Query: 269 ---IKTNVNYS---TIFRKLYWIDE 287
I+ +V + +F W+ +
Sbjct: 683 RRLIQNDVGHPFSLAVFEDHLWVSD 707
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 26/217 (11%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST- 277
I + DG++ ++S ++ L D ++YFA + L +I+ +++ T
Sbjct: 499 IRHMHFDGTDYKVLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANMDGSQRERLITE 558
Query: 278 ------------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
I R++YW D G + +G +++ G + I++ ++ + +
Sbjct: 559 GVDTLEGLALDWIGRRIYWTDSGKS----VVGGSDLSGKHHRIIIQERISRPRGIAVHPR 614
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
R LFWTD G +PRIE + GS+R I S+ + P+G+T+D T +Y+
Sbjct: 615 ---------ARRLFWTDVGMSPRIESASLQGSDRVLIASSNLLEPSGITIDYLTDTLYWC 665
Query: 386 DSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
D+K I+ N DG+ R+++I D+ F+ + D+
Sbjct: 666 DTKRSVIEMANLDGSKRRRLIQNDVGHPFSLAVFEDH 702
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 36 KFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGSYICS 94
+FGLC P C G LS D C+D+NEC + C+ C NT GSY C+
Sbjct: 332 RFGLCERD----PKSHSSACAEGYTLSRDRKYCEDVNECATQNHGCTLGCENTPGSYHCT 387
Query: 95 CNEGYVLEYDNHTCKAI 111
C G+VL D C +
Sbjct: 388 CPTGFVLLPDGKQCHEL 404
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 71/183 (38%), Gaps = 36/183 (19%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
V GLA DWI + W+D + I V D G N VL ++ P + +DP R +FW
Sbjct: 125 VSGLAIDWIDDEVLWVDQQNGVITVTDMTGKNSRVLLS-SLKHPSNIAVDPI--ERLMFW 181
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
+ + R + G + T++ T + LTLD+ +R
Sbjct: 182 SSEVTG-SLHRAHLKGVDVKTLLETGGI--SVLTLDVLDKR------------------- 219
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
L+W+ + G G I + +G + ++ + ++ ++YS
Sbjct: 220 -----------LFWVQDSGEGSHAYIHSCDYEGGSVRLIRHQARHSLSSMAFFGDRIFYS 268
Query: 331 TLK 333
LK
Sbjct: 269 VLK 271
>gi|148680291|gb|EDL12238.1| epidermal growth factor, isoform CRA_b [Mus musculus]
Length = 1217
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 148/325 (45%), Gaps = 60/325 (18%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C +L C CS+ C T G C CP G +L D TC
Sbjct: 388 CPTGFVLLPDGKQCHELVSCPGNVSKCSHGCVLTSDGPRCICPAGSVLGRDGKTC---TG 444
Query: 74 CEQP--GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN---RH--- 124
C P G CSQ+C + GS+ C C GY L+ D +C A L ++ RH
Sbjct: 445 CSSPDNGGCSQICLPLRPGSWECDCFPGYDLQSDRKSCAASGPQPLLLFANSQDIRHMHF 504
Query: 125 -----SILVAD--------------------------LEEKGKD-HRAQDIVVSGLDLVE 152
+L++ +E D + + ++ G+D +E
Sbjct: 505 DGTDYKVLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANMDGSQRERLITEGVDTLE 564
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA DWIG IYW DS + + D +G + ++ ++ I++PRG+ + P R LFWTD
Sbjct: 565 GLALDWIGRRIYWTDSGKSVVGGSDLSGKHHRIIIQERISRPRGIAVHPR--ARRLFWTD 622
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE---- 268
G +PRIE + GS+R I S+ + P+G+T+D T +Y+ D+K I+ +L+
Sbjct: 623 VGMSPRIESASLQGSDRVLIASSNLLEPSGITIDYLTDTLYWCDTKRSVIEMANLDGSKR 682
Query: 269 ---IKTNVNYS---TIFRKLYWIDE 287
I+ +V + +F W+ +
Sbjct: 683 RRLIQNDVGHPFSLAVFEDHLWVSD 707
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 26/217 (11%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST- 277
I + DG++ ++S ++ L D ++YFA + L +I+ +++ T
Sbjct: 499 IRHMHFDGTDYKVLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANMDGSQRERLITE 558
Query: 278 ------------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
I R++YW D G + +G +++ G + I++ ++ + +
Sbjct: 559 GVDTLEGLALDWIGRRIYWTDSGKS----VVGGSDLSGKHHRIIIQERISRPRGIAVHPR 614
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
R LFWTD G +PRIE + GS+R I S+ + P+G+T+D T +Y+
Sbjct: 615 ---------ARRLFWTDVGMSPRIESASLQGSDRVLIASSNLLEPSGITIDYLTDTLYWC 665
Query: 386 DSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
D+K I+ N DG+ R+++I D+ F+ + D+
Sbjct: 666 DTKRSVIEMANLDGSKRRRLIQNDVGHPFSLAVFEDH 702
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 36 KFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGSYICS 94
+FGLC P C G LS D C+D+NEC + C+ C NT GSY C+
Sbjct: 332 RFGLCERD----PKSHSSACAEGYTLSRDRKYCEDVNECATQNHGCTLGCENTPGSYHCT 387
Query: 95 CNEGYVLEYDNHTCKAI 111
C G+VL D C +
Sbjct: 388 CPTGFVLLPDGKQCHEL 404
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 71/183 (38%), Gaps = 36/183 (19%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
V GLA DWI + W+D + I V D G N VL ++ P + +DP R +FW
Sbjct: 125 VSGLAIDWIDDEVLWVDQQNGVITVTDMTGKNSRVLLS-SLKHPSNIAVDPI--ERLMFW 181
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
+ + R + G + T++ T + LTLD+ +R
Sbjct: 182 SSEVTG-SLHRAHLKGVDVKTLLETGGI--SVLTLDVLDKR------------------- 219
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
L+W+ + G G I + +G + ++ + ++ ++YS
Sbjct: 220 -----------LFWVQDSGEGSHAYIHSCDYEGGSVRLIRHQARHSLSSMAFFGDRIFYS 268
Query: 331 TLK 333
LK
Sbjct: 269 VLK 271
>gi|195153907|ref|XP_002017865.1| GL17073 [Drosophila persimilis]
gi|194113661|gb|EDW35704.1| GL17073 [Drosophila persimilis]
Length = 1760
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 154/361 (42%), Gaps = 73/361 (20%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPG-EILSNDSVT--CQDMNECEQPGYCSQMCTNT 87
C H G CS+ C P G C CP G +++S +S Q+M Q S++ ++
Sbjct: 368 CAHNNGNCSHLCLLATNPQGYSCACPTGVKLVSGNSCANGSQEMLFIVQRTQISKISLDS 427
Query: 88 KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEE------KGKDHRAQ 141
I G V ++ A I +D+E +
Sbjct: 428 PDYTIFPLPLGRV-----------KYAIAIDYDPVEEHIYWSDVEAYTIRRARADGTAVT 476
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
D V S + +GLA DW+ ++YW D+ +RIEVC +GT R VL +++ +PR + + P
Sbjct: 477 DFVTSEVRHPDGLALDWLARNLYWTDTVTDRIEVCRLDGTARKVLIYEHLEEPRAIAVAP 536
Query: 202 SPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
S G W+FW+DW E P++ER +DGS R ++S + WPNG+ LDI + +Y+ D K D
Sbjct: 537 SLG--WMFWSDWNERKPKVERASLDGSERVVLVSENLGWPNGIALDIVAKTIYWCDGKTD 594
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
KI ANMDGS+ +++S L L
Sbjct: 595 ----------------------------------KIEVANMDGSDRRVVISDNLKHLFGL 620
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
+ + LY WTDW + G+NR ++ +P+ + L +
Sbjct: 621 SILDDYLY-----------WTDWQRRSIDRAHKITGNNRIVVVDQ---YPDLMGLKVTRL 666
Query: 381 R 381
R
Sbjct: 667 R 667
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 87/158 (55%), Gaps = 14/158 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q ++ +GLD EGLA DW IYW D NRIEV +G + VL + QPR + +
Sbjct: 169 QTVISTGLDKPEGLAIDWYTDKIYWTDGEKNRIEVASLDGKYQKVLFWTELDQPRAVAV- 227
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGS--NRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
PG R L WTDWGE P+IER MDG +R T++ ++WPNGL +D+ + +Y+ D
Sbjct: 228 -VPGKRLLIWTDWGEYPKIERASMDGDPLSRMTLVKDNVFWPNGLAVDLKSDLIYWTDGN 286
Query: 259 LDFIDCKSLE------IKTNVNYS---TIF-RKLYWID 286
FID L+ I N+ Y T F +LYW D
Sbjct: 287 NRFIDVMKLDGSNRRTIVNNLKYPFSLTYFDNRLYWTD 324
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 128/335 (38%), Gaps = 96/335 (28%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C N Y+C C Y L D TC AAFL+ S + I +E +
Sbjct: 680 GGCSHLCLNRPRDYVCRCAIDYELANDKRTCVV---PAAFLLFSRQEHIGRISIEYNEGN 736
Query: 138 HR-------------------------------------------AQDIVVSGLDLVEGL 154
H Q IV SGL +G+
Sbjct: 737 HNDERIPFKDVRDAHALDVSVAERRIYWTDQKTKCIFRAFLNGSYVQRIVDSGLIGPDGI 796
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DW+G +IYW D+ RIEV +G++R VL + +PR ++L+P G +++WT+
Sbjct: 797 AVDWLGSNIYWSDAEARRIEVARLDGSSRRVLLWKGVEEPRSLVLEPRRG--YMYWTE-S 853
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
+ I R MDGS TI++ + GLT D TRR+Y+A
Sbjct: 854 PSDSIRRATMDGSELQTIVAGANH-AAGLTFDQETRRLYWATQSR--------------- 897
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
P KI A+ DG ILV E A+ L +Y
Sbjct: 898 ------------------PAKIESADWDGKKRQILVGSDTDEPYAVSLYQDYVY------ 933
Query: 335 TRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIY 368
W+DW IER+ G NRS + S Y
Sbjct: 934 -----WSDWNTGD-IERVHKTTGENRSLVHSGMTY 962
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 45/227 (19%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D P ++W+D E I R DG+ + +++++ P+GL LD R +Y+
Sbjct: 443 AIAIDYDPVEEHIYWSD-VEAYTIRRARADGTAVTDFVTSEVRHPDGLALDWLARNLYWT 501
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ D I+ +DG+ +L+ L
Sbjct: 502 DTVTDRIEV----------------------------------CRLDGTARKVLIYEHLE 527
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLT 374
E A+ + + W+FW+DW E P++ER +DGS R ++S + WPNG+
Sbjct: 528 EPRAIAVAPSL---------GWMFWSDWNERKPKVERASLDGSERVVLVSENLGWPNGIA 578
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
LDI + +Y+ D K D I+ N DG+ R+ VI +L F ++ D
Sbjct: 579 LDIVAKTIYWCDGKTDKIEVANMDGSDRRVVISDNLKHLFGLSILDD 625
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 122/301 (40%), Gaps = 88/301 (29%)
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGH--IYWLD 167
A ++ A L+ + RH I VA++ + D++V DL E +A D+ + W D
Sbjct: 88 AFINTPATLLFTTRHDIQVANITRPTGGPQI-DVLVR--DLAEAMAIDFYYAKNLVCWTD 144
Query: 168 SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227
IE N + + L+K +
Sbjct: 145 CGREIIECAQTNASALLPLSK--------------------------------------A 166
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDE 287
+ T+IST + P GL +D T ++Y+ D + + I+ SL+ K + L+W +
Sbjct: 167 PKQTVISTGLDKPEGLAIDWYTDKIYWTDGEKNRIEVASLDGKYQ-------KVLFWTE- 218
Query: 288 GGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
+D A +V G+ R L WTDWGE P
Sbjct: 219 -------------LDQPRAVAVVPGK----------------------RLLIWTDWGEYP 243
Query: 348 RIERIGMDGS--NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+IER MDG +R T++ ++WPNGL +D+ + +Y+ D FID DG+ R+ +
Sbjct: 244 KIERASMDGDPLSRMTLVKDNVFWPNGLAVDLKSDLIYWTDGNNRFIDVMKLDGSNRRTI 303
Query: 406 I 406
+
Sbjct: 304 V 304
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 119/294 (40%), Gaps = 63/294 (21%)
Query: 78 GYCSQMCTNTKGS--YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G CS +C G C+C Y L D +C + ++I S R+S L
Sbjct: 985 GGCSHLCLAQPGRRGMTCACPTHYQLAKDGVSCIPPKN---YIIFSQRNSF--GRLLPNT 1039
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D + VSG + + + YD I +IYW++ R + I+ NGT +LA N QP
Sbjct: 1040 TDCPNVPLPVSGKN-IRAVDYDPISHYIYWIEGRSHSIKRSLANGTKVSLLA--NSGQPF 1096
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D R LFWT SN + S F
Sbjct: 1097 DIAIDII--GRLLFWT------------CSYSNSINVTS-------------------FL 1123
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL- 314
+ ID E N+ + R L+W D G + I +A +DG N + ++ +L
Sbjct: 1124 GESVGVIDTGDSEKPRNIAVHAMKRLLFWTDVGSHQA---IIRARVDG-NERVELAYKLE 1179
Query: 315 -YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 367
ALALD ++ M+YY+ K RI+ I ++G N+ T++S I
Sbjct: 1180 GVTALALDQQSDMIYYAHGK--------------RIDVIDINGKNKKTLVSMHI 1219
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 33/188 (17%)
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D ++ F D + ++ S R++YW D+ I +A ++GS +V L
Sbjct: 739 DERIPFKDVRDAHA---LDVSVAERRIYWTDQKTKC----IFRAFLNGSYVQRIVDSGLI 791
Query: 316 --EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
+ +A+D +Y W+D E RIE +DGS+R ++ + P L
Sbjct: 792 GPDGIAVDWLGSNIY-----------WSD-AEARRIEVARLDGSSRRVLLWKGVEEPRSL 839
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLEN 433
L+ +Y+ +S D I DG+ Q ++ G N L D E
Sbjct: 840 VLEPRRGYMYWTESPSDSIRRATMDGSELQTIV------------AGANHAAGLTFDQET 887
Query: 434 GMLYYSTE 441
LY++T+
Sbjct: 888 RRLYWATQ 895
>gi|323649990|gb|ADX97081.1| low-density lipoprotein receptor-related protein 1 [Perca
flavescens]
Length = 808
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 142/321 (44%), Gaps = 67/321 (20%)
Query: 4 RCVNLTKVCDGKTDCPN-GADE---GPGCDLAECKHKFGLCSN----TCHPTPLGALCTC 55
RC++ T C+ DC + G+DE L +C+ C + C + C+C
Sbjct: 193 RCISSTLRCNFFNDCEDYGSDEINCKTDTKLNDCRSNRTQCGDGDEAHCVTNGTDSFCSC 252
Query: 56 PPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA--INH 113
PG TC D NEC Q G CS +C NTKGSY CSC++ + N TCKA +N
Sbjct: 253 KPG-FQKTGHHTCGDKNECLQFGVCSHVCNNTKGSYKCSCHKYFTRI--NDTCKADSMNS 309
Query: 114 SAAFLIIS--------------------------------------------NRHSILVA 129
S L I+ N H+ ++
Sbjct: 310 SRQILYIADDNEIRSLDPGMPNWRYEQTFQGDASVRIDAMDLHVKTNRIFWTNWHTGRIS 369
Query: 130 DLE--------EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
E + R ++ + L + G+A DW+ G++YW DS + IEV +G
Sbjct: 370 SYELPEPSTSSSSSNEGRITNLQIKELKMPRGIAVDWVAGNLYWTDSGRDVIEVAQMSGQ 429
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
+ L I +P +++DP GT ++W DWG +P+IE MDG+ R T++ I WP
Sbjct: 430 HCKTLVSGMIDEPYAIVVDPQRGT--MYWADWGNHPKIETAAMDGTLRQTLVHENIQWPT 487
Query: 242 GLTLDIATRRVYFADSKLDFI 262
GL +D R+Y+AD+KL I
Sbjct: 488 GLAVDYFNERLYWADAKLSVI 508
>gi|198458206|ref|XP_001360952.2| GA19223 [Drosophila pseudoobscura pseudoobscura]
gi|198136259|gb|EAL25528.2| GA19223 [Drosophila pseudoobscura pseudoobscura]
Length = 1687
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 154/361 (42%), Gaps = 73/361 (20%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPG-EILSNDSVT--CQDMNECEQPGYCSQMCTNT 87
C H G CS+ C P G C CP G +++S +S Q+M Q S++ ++
Sbjct: 369 CAHNNGNCSHLCLLATNPQGYSCACPTGVKLVSGNSCANGSQEMLFIVQRTQISKISLDS 428
Query: 88 KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEE------KGKDHRAQ 141
I G V ++ A I +D+E +
Sbjct: 429 PDYTIFPLPLGRV-----------KYAIAIDYDPVEEHIYWSDVEAYTIRRARADGTAVT 477
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
D V S + +GLA DW+ ++YW D+ +RIEVC +GT R VL +++ +PR + + P
Sbjct: 478 DFVTSEVRHPDGLALDWLARNLYWTDTVTDRIEVCRLDGTARKVLIYEHLEEPRAIAVAP 537
Query: 202 SPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
S G W+FW+DW E P++ER +DGS R ++S + WPNG+ LDI + +Y+ D K D
Sbjct: 538 SLG--WMFWSDWNERKPKVERASLDGSERVVLVSENLGWPNGIALDIVAKTIYWCDGKTD 595
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
KI ANMDGS+ +++S L L
Sbjct: 596 ----------------------------------KIEVANMDGSDRRVVISDNLKHLFGL 621
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
+ + LY WTDW + G+NR ++ +P+ + L +
Sbjct: 622 SILDDYLY-----------WTDWQRRSIDRAHKITGNNRIVVVDQ---YPDLMGLKVTRL 667
Query: 381 R 381
R
Sbjct: 668 R 668
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 87/158 (55%), Gaps = 14/158 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q ++ +GLD EGLA DW IYW D NRIEV +G + VL + QPR + +
Sbjct: 170 QTVISTGLDKPEGLAIDWYTDKIYWTDGEKNRIEVASLDGKYQKVLFWTELDQPRAVAV- 228
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGS--NRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
PG R L WTDWGE P+IER MDG +R T++ ++WPNGL +D+ + +Y+ D
Sbjct: 229 -VPGKRLLIWTDWGEYPKIERASMDGDPLSRMTLVKDNVFWPNGLAVDLKSDLIYWTDGN 287
Query: 259 LDFIDCKSLE------IKTNVNYS---TIF-RKLYWID 286
FID L+ I N+ Y T F +LYW D
Sbjct: 288 NRFIDVMKLDGSNRRTIVNNLKYPFSLTYFDNRLYWTD 325
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 128/335 (38%), Gaps = 96/335 (28%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C N Y+C C Y L D TC AAFL+ S + I +E +
Sbjct: 681 GGCSHLCLNRPRDYVCRCAIDYELANDKRTCVV---PAAFLLFSRQEHIGRISIEYNEGN 737
Query: 138 HR-------------------------------------------AQDIVVSGLDLVEGL 154
H Q IV SGL +G+
Sbjct: 738 HNDERIPFKDVRDAHALDVSVAERRIYWTDQKTKCIFRAFLNGSYVQRIVDSGLIGPDGI 797
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DW+G +IYW D+ RIEV +G++R VL + +PR ++L+P G +++WT+
Sbjct: 798 AVDWLGSNIYWSDAEARRIEVARLDGSSRRVLLWKGVEEPRSLVLEPRRG--YMYWTE-S 854
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
+ I R MDGS TI++ + GLT D TRR+Y+A
Sbjct: 855 PSDSIRRATMDGSELQTIVAGANH-AAGLTFDQETRRLYWATQSR--------------- 898
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
P KI A+ DG ILV E A+ L +Y
Sbjct: 899 ------------------PAKIESADWDGKKRQILVGSDTDEPYAVSLYQDYVY------ 934
Query: 335 TRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIY 368
W+DW IER+ G NRS + S Y
Sbjct: 935 -----WSDWNTGD-IERVHKTTGENRSLVHSGMTY 963
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 45/227 (19%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D P ++W+D E I R DG+ + +++++ P+GL LD R +Y+
Sbjct: 444 AIAIDYDPVEEHIYWSD-VEAYTIRRARADGTAVTDFVTSEVRHPDGLALDWLARNLYWT 502
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ D I+ +DG+ +L+ L
Sbjct: 503 DTVTDRIEV----------------------------------CRLDGTARKVLIYEHLE 528
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLT 374
E A+ + + W+FW+DW E P++ER +DGS R ++S + WPNG+
Sbjct: 529 EPRAIAVAPSL---------GWMFWSDWNERKPKVERASLDGSERVVLVSENLGWPNGIA 579
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
LDI + +Y+ D K D I+ N DG+ R+ VI +L F ++ D
Sbjct: 580 LDIVAKTIYWCDGKTDKIEVANMDGSDRRVVISDNLKHLFGLSILDD 626
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 122/301 (40%), Gaps = 88/301 (29%)
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGH--IYWLD 167
A ++ A L+ + RH I VA++ + D++V DL E +A D+ + W D
Sbjct: 89 AFINTPATLLFTTRHDIQVANITRPTGGPQI-DVLVR--DLAEAMAIDFYYAKNLVCWTD 145
Query: 168 SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227
IE N + + L+K +
Sbjct: 146 CGREIIECAQTNASALLPLSK--------------------------------------A 167
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDE 287
+ T+IST + P GL +D T ++Y+ D + + I+ SL+ K + L+W +
Sbjct: 168 PKQTVISTGLDKPEGLAIDWYTDKIYWTDGEKNRIEVASLDGKYQ-------KVLFWTE- 219
Query: 288 GGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
+D A +V G+ R L WTDWGE P
Sbjct: 220 -------------LDQPRAVAVVPGK----------------------RLLIWTDWGEYP 244
Query: 348 RIERIGMDGS--NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+IER MDG +R T++ ++WPNGL +D+ + +Y+ D FID DG+ R+ +
Sbjct: 245 KIERASMDGDPLSRMTLVKDNVFWPNGLAVDLKSDLIYWTDGNNRFIDVMKLDGSNRRTI 304
Query: 406 I 406
+
Sbjct: 305 V 305
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 119/294 (40%), Gaps = 63/294 (21%)
Query: 78 GYCSQMCTNTKGS--YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G CS +C G C+C Y L D +C + ++I S R+S L
Sbjct: 986 GGCSHLCLAQPGRRGMTCACPTHYQLAKDGVSCIPPKN---YIIFSQRNSF--GRLLPNT 1040
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D + VSG + + + YD I +IYW++ R + I+ NGT +LA N QP
Sbjct: 1041 TDCPNVPLPVSGKN-IRAVDYDPISHYIYWIEGRSHSIKRSLANGTKVSLLA--NSGQPF 1097
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D R LFWT SN + S F
Sbjct: 1098 DIAIDII--GRLLFWT------------CSYSNSINVTS-------------------FL 1124
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL- 314
+ ID E N+ + R L+W D G + I +A +DG N + ++ +L
Sbjct: 1125 GESVGVIDTGDSEKPRNIAVHAMKRLLFWTDVGSHQA---IIRARVDG-NERVELAYKLE 1180
Query: 315 -YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 367
ALALD ++ M+YY+ K RI+ I ++G N+ T++S I
Sbjct: 1181 GVTALALDQQSDMIYYAHGK--------------RIDVIDINGKNKKTLVSMHI 1220
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 77/189 (40%), Gaps = 33/189 (17%)
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D ++ F D + ++ S R++YW D+ I +A ++GS +V L
Sbjct: 740 DERIPFKDVRDAHA---LDVSVAERRIYWTDQKTKC----IFRAFLNGSYVQRIVDSGLI 792
Query: 316 --EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
+ +A+D +Y W+D E RIE +DGS+R ++ + P L
Sbjct: 793 GPDGIAVDWLGSNIY-----------WSD-AEARRIEVARLDGSSRRVLLWKGVEEPRSL 840
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLEN 433
L+ +Y+ +S D I DG+ Q ++ G N L D E
Sbjct: 841 VLEPRRGYMYWTESPSDSIRRATMDGSELQTIV------------AGANHAAGLTFDQET 888
Query: 434 GMLYYSTEG 442
LY++T+
Sbjct: 889 RRLYWATQS 897
>gi|326678474|ref|XP_698845.4| PREDICTED: low-density lipoprotein receptor-related protein 1B,
partial [Danio rerio]
Length = 1573
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 44/252 (17%)
Query: 47 TPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYD 104
+PL ++ C+C PG L +D C D++EC + CSQ C NT GS+ C C +GY
Sbjct: 1 SPLSSVFQCSCWPGFRLKHDGRMCIDVDECSEQFPCSQQCVNTYGSFHCLCADGYQRPAS 60
Query: 105 N-HTCKAINHSAAFLIISNRHSILVADLE------------------------------- 132
N H+C++++ FLI+++ H I L+
Sbjct: 61 NTHSCRSLSAEQPFLILADHHEIRKISLDGSNYTLLKQGLSNVISLDFDSRKELIYWIDT 120
Query: 133 EKGKDHRAQDIVVSGLDLV--------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
+ R + ++G DL LA DWIG ++YW D +EV NG
Sbjct: 121 SRPSGRRINRMRLNGSDLKVVHRTSVPSALAVDWIGKNLYWCDGERKTLEVAKANGLYPT 180
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
VL + + P + LD G ++FW D E P+I RIGMDGS II T+I P+ LT
Sbjct: 181 VLLRTGLRNPTALALDTLTG--YVFWIDCCEQPQIGRIGMDGSKPRVIIDTEIRSPSALT 238
Query: 245 LDIATRRVYFAD 256
+D +R+Y+AD
Sbjct: 239 IDHVNKRIYWAD 250
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 135/325 (41%), Gaps = 69/325 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL---AECKHKFGLCSNT--CHPTPLGALCTCPPG 58
RC+ CD DC +G+DE C C+ + LC + C+ ++C C G
Sbjct: 837 RCIADELQCDLFDDCEDGSDER-DCKAYVDGACRGRPDLCGDDAFCNHNKTPSVCQCKEG 895
Query: 59 EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNE--------------------- 97
+ + C+++NEC G CSQ CTN+KGSY C+C+
Sbjct: 896 FQRNQKNRQCEEVNECLLFGICSQYCTNSKGSYRCTCDRNFKEIHGECITKGPEDQVLYV 955
Query: 98 -------GYVLEYDN---HT-------------CKAINHSAAFLIIS--NRHSILVADLE 132
+V Y+ HT A+ H F+ + N + DL+
Sbjct: 956 ANDTEIRSFVYPYNQTHGHTQLARISDSARIIGMDALFHHHKFVWATQFNPGGMFYKDLQ 1015
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD-SRLN--------------RIEVCD 177
++ D ++ ++ DW+ G++YW D SR++ I V
Sbjct: 1016 DRSPDTTNSGVICPDFRRPRDISADWVTGNLYWTDHSRMHWFSYYTAHWRRLRYSINVGQ 1075
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
G N L D +P + ++P G ++WT G++ IE MDGS R +I+ +
Sbjct: 1076 LGGPNCTRLITDIDGEPFAITVNPIRGM--VYWTVIGDHSHIEEAAMDGSMRRVLITRNL 1133
Query: 238 YWPNGLTLDIATRRVYFADSKLDFI 262
P GL +D +R+Y+ADS+L I
Sbjct: 1134 RRPTGLAIDYYNQRLYWADSELSQI 1158
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 108/213 (50%), Gaps = 34/213 (15%)
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR--VYFADS-----------KLD 260
++ I +I +DGSN + + K N ++LD +R+ +Y+ D+ +L+
Sbjct: 78 ADHHEIRKISLDGSNYTLL---KQGLSNVISLDFDSRKELIYWIDTSRPSGRRINRMRLN 134
Query: 261 FIDCKSLE---IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
D K + + + + I + LYW D G L++ KAN G ++L+ L
Sbjct: 135 GSDLKVVHRTSVPSALAVDWIGKNLYWCD--GERKTLEVAKAN--GLYPTVLLRTGLRNP 190
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
AL L+ TL T ++FW D E P+I RIGMDGS II T+I P+ LT+D
Sbjct: 191 TALALD-------TL--TGYVFWIDCCEQPQIGRIGMDGSKPRVIIDTEIRSPSALTIDH 241
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+R+Y+AD + I F N DGT R +V + D+
Sbjct: 242 VNKRIYWADE--NHILFANIDGTKRHKVPIQDI 272
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 94/448 (20%), Positives = 162/448 (36%), Gaps = 89/448 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ ++C+G DC + +DE D+ + P P G D
Sbjct: 794 CLRSEQICNGANDCGDNSDEDHCVDVLK------------KPRPCGKTEFACANHRCIAD 841
Query: 65 SVTCQDMNECE------------------QPGYCSQ--MCTNTKGSYICSCNEGYVLEYD 104
+ C ++CE +P C C + K +C C EG+
Sbjct: 842 ELQCDLFDDCEDGSDERDCKAYVDGACRGRPDLCGDDAFCNHNKTPSVCQCKEGFQRNQK 901
Query: 105 NHTCKAINHSAAFLIIS----NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDW-I 159
N C+ +N F I S N + K+ + I D V +A D I
Sbjct: 902 NRQCEEVNECLLFGICSQYCTNSKGSYRCTCDRNFKEIHGECITKGPEDQVLYVANDTEI 961
Query: 160 GGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRI 219
+Y + ++ + + RI+ D + + +F+ D +
Sbjct: 962 RSFVYPYNQTHGHTQLARISDSARII-GMDALFHHHKFVWATQFNPGGMFYKD------L 1014
Query: 220 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD-SKLDFIDCKSLEIKTNVNYSTI 278
+ D +N S +I P ++ D T +Y+ D S++ + Y+
Sbjct: 1015 QDRSPDTTN-SGVICPDFRRPRDISADWVTGNLYWTDHSRMHWFS----------YYTAH 1063
Query: 279 FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE--NGMLYYSTLKCTR 336
+R+L + I + G N + L++ E A+ + GM+Y
Sbjct: 1064 WRRLRY----------SINVGQLGGPNCTRLITDIDGEPFAITVNPIRGMVY-------- 1105
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396
WT G++ IE MDGS R +I+ + P GL +D +R+Y+ADS+L I
Sbjct: 1106 ---WTVIGDHSHIEEAAMDGSMRRVLITRNLRRPTGLAIDYYNQRLYWADSELSQIGSVR 1162
Query: 397 YDGT----------GRQQVILIDLMVEF 414
+DG+ G Q IDL ++
Sbjct: 1163 FDGSDSLVAISSRHGISQPFRIDLFEDY 1190
>gi|449265851|gb|EMC76981.1| Pro-epidermal growth factor [Columba livia]
Length = 1254
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 132/297 (44%), Gaps = 52/297 (17%)
Query: 18 CPNG----ADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G D +L C CS+ C T G +C CP G +L D C
Sbjct: 427 CPRGFVLLPDRKTCHELISCASNNTECSHGCLQTSKGPVCFCPEGSVLKEDGKACTG--- 483
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---- 126
C P G CSQ+C++ + S+ C+C GY L+ D C AI FL+ +N I
Sbjct: 484 CTSPDNGGCSQICSSLSPSSWECACFPGYKLQRDRKHCTAIG-PKPFLLFANSQDIRQIS 542
Query: 127 -----------------LVADLEEKGKD----HRA--------------QDIVVSGLDLV 151
L D + H A + ++ +D
Sbjct: 543 FDGADYVSLLDWQMGIVLALDFDPVENKIYFAHTALKWIERADLDGSNREKVIHEAIDTP 602
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EGLA DWI +YW D +E + NG +R ++ +I+QPRG+ + P + LFWT
Sbjct: 603 EGLAVDWINRKLYWTDRGKACLERSNLNGMHRKMIIWKDISQPRGIAIHPF--AQRLFWT 660
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
D G NPRIE ++G +R I ST + WP+G+ LD +VY+ D+K ++ +L+
Sbjct: 661 DMGVNPRIESSSLEGIDRQVIASTGLVWPSGIALDYLADKVYWCDAKQSVVESANLD 717
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 121/318 (38%), Gaps = 74/318 (23%)
Query: 55 CPPGEILSNDSVTCQDMNECEQPGY--CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN 112
CP G L ++ C D++EC + G C Q C N GSY+CSC GY L+ D +C +N
Sbjct: 28 CPNGYRLKTENSACIDIDECLEGGLGTCGQTCVNVPGSYVCSCLPGYTLDIDKRSC-YVN 86
Query: 113 HSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGL------------------------ 148
A FL+ S+ ++I D E + D S L
Sbjct: 87 DPAPFLLFSHGNAIFRIDTEGTNHERLVADTGHSTLMDFHYTEEKVYWVDSERRLLQRMN 146
Query: 149 -------------DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
+ G A DWI I W + + IE D NG R V+ +D + P
Sbjct: 147 LNGSERERLSYIDKGISGFAIDWINQDILWANRQKATIEATDMNGKKRRVILRD-VGHPM 205
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D R LFW+ G I R+ + GS T++ T T ++
Sbjct: 206 RITIDAE--QRLLFWSSEGTVSNIHRVSLIGSIVRTLLRT-------------TEKIKAI 250
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
LD +D +LYWI IG N DG +L + +
Sbjct: 251 --SLDLVD----------------TRLYWIQHDHRKEISHIGSCNYDGGAVRLLKNSVRH 292
Query: 316 EALALDLENGMLYYSTLK 333
+ L + + LYYS LK
Sbjct: 293 QLLGMSVFAEHLYYSELK 310
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 44/94 (46%), Gaps = 15/94 (15%)
Query: 24 EGPGCDL--AECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-- 79
E CDL +C+ + C P C C G ILS + C+D+NEC G+
Sbjct: 359 EKETCDLNKEKCRRRI------CRPDSRSHRCRCSNGFILSRNKQFCEDINEC---GFWN 409
Query: 80 --CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI 111
C+ C N GSY C+C G+VL D TC +
Sbjct: 410 HGCTLGCVNIPGSYYCTCPRGFVLLPDRKTCHEL 443
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 16/118 (13%)
Query: 296 IGKANMDGSNASILVSGQLYEALALD---LENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
I + + DG++ L+ Q+ LALD +EN + + T L W IER
Sbjct: 538 IRQISFDGADYVSLLDWQMGIVLALDFDPVENKIYFAHTA-----LKW--------IERA 584
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+DGSNR +I I P GL +D R++Y+ D ++ N +G R+ +I D+
Sbjct: 585 DLDGSNREKVIHEAIDTPEGLAVDWINRKLYWTDRGKACLERSNLNGMHRKMIIWKDI 642
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 10/73 (13%)
Query: 50 GALCTCPPGEILSNDSVTCQDMNECE-QPGYCSQ---MCTNTKGSYICSCNEGYVLE--- 102
GA+C C G + +C D++EC +C++ C NT+G Y+C C EGY+ +
Sbjct: 907 GAMCQCLKG--FTRKGKSCYDVDECAINIDHCNRNVSSCINTEGGYVCKCLEGYMGDGVH 964
Query: 103 -YDNHTCKAINHS 114
YD CK +H+
Sbjct: 965 CYDIDECKMGSHT 977
>gi|198424779|ref|XP_002128714.1| PREDICTED: low density lipoprotein receptor-related protein [Ciona
intestinalis]
Length = 1839
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 155/362 (42%), Gaps = 84/362 (23%)
Query: 20 NGADEGPGCDLAECKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQP 77
N + PG + C G CS+ C P P C CP G + D TC+ P
Sbjct: 279 NSQRQKPGPN--PCGSTNGGCSHLCLLSPKPPYYKCACPTGVQIMKDRKTCK-----HGP 331
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHT-----CKAINHSA----------AFLIISN 122
+ T I L+ D+HT K + ++ + +
Sbjct: 332 DQILLLARRTDIRMIS-------LDTDDHTDVLLPVKTVLNAVTVDYDPVDKFVYWTDED 384
Query: 123 RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
R +IL L G ++ I+ L+ +G+A DW+ ++YW D+ N + V NGT+
Sbjct: 385 RKAILRCHLNGTG----SEAIITENLEQSDGMAIDWVARNLYWTDTGRNYVAVARLNGTS 440
Query: 183 RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 242
R +L + I +PR +++DP+ G + +WTDWGENP+IER+ MDG+NR + + WPNG
Sbjct: 441 RRILIETEIDEPRAIVVDPTAG--YFYWTDWGENPKIERVEMDGTNRILFVRKHLKWPNG 498
Query: 243 LTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMD 302
L +D +Y+AD+ LD KI + +D
Sbjct: 499 LAIDHTHGWLYWADASLD----------------------------------KIERIKLD 524
Query: 303 GSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM-DGSNRST 361
G+ +LVSG++ + LY W DW + RIER+ + D +R
Sbjct: 525 GTQRKMLVSGKIPHIFGFSILGNYLY-----------WADW-QRRRIERMRIGDPRSREI 572
Query: 362 II 363
+I
Sbjct: 573 LI 574
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 83/124 (66%), Gaps = 2/124 (1%)
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
+ D++VSG+ EGLA DWIG +YW D RIEV + +G++R VL +N+ PR +
Sbjct: 89 KKMDVLVSGMVKPEGLACDWIGRKLYWTDRGTKRIEVSELDGSHRKVLLWNNLDLPRAIA 148
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
+DP R+++WTDWGE P+IER GMDGS R +I+ IYWPNG+TLD +VY+ ++
Sbjct: 149 VDPH--NRYMYWTDWGEEPKIERSGMDGSQREVLINQNIYWPNGITLDYEEGKVYWIEAG 206
Query: 259 LDFI 262
FI
Sbjct: 207 HHFI 210
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 74/127 (58%), Gaps = 17/127 (13%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILV--SGQLYEALALDLENGMLYYSTLKCT 335
I RKLYW D G +I + +DGS+ +L+ + L A+A+D N
Sbjct: 109 IGRKLYWTDRGTK----RIEVSELDGSHRKVLLWNNLDLPRAIAVDPHN----------- 153
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
R+++WTDWGE P+IER GMDGS R +I+ IYWPNG+TLD +VY+ ++ FI
Sbjct: 154 RYMYWTDWGEEPKIERSGMDGSQREVLINQNIYWPNGITLDYEEGKVYWIEAGHHFIHRI 213
Query: 396 NYDGTGR 402
N DG+ R
Sbjct: 214 NLDGSQR 220
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 44/226 (19%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D P ++++WTD + I R ++G+ II+ + +G+ +D
Sbjct: 366 AVTVDYDPVDKFVYWTD-EDRKAILRCHLNGTGSEAIITENLEQSDGMAIDW-------- 416
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ R LYW D G N V + A ++G++ IL+ ++
Sbjct: 417 ----------------------VARNLYWTDTGRNYVAV----ARLNGTSRRILIETEID 450
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
E A+ ++ Y+ +WTDWGENP+IER+ MDG+NR + + WPNGL +
Sbjct: 451 EPRAIVVDPTAGYF---------YWTDWGENPKIERVEMDGTNRILFVRKHLKWPNGLAI 501
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
D +Y+AD+ LD I+ DGT R+ ++ + F ++G+
Sbjct: 502 DHTHGWLYWADASLDKIERIKLDGTQRKMLVSGKIPHIFGFSILGN 547
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 141/338 (41%), Gaps = 59/338 (17%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G CS +C + Y C+C G + D TCK + L+++ R I + L+
Sbjct: 295 GGCSHLCLLSPKPPYYKCACPTGVQIMKDRKTCK--HGPDQILLLARRTDIRMISLDTD- 351
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
DH + V + + YD + +YW D I C NGT + +N+ Q
Sbjct: 352 -DHTDVLLPVKTVLNAVTVDYDPVDKFVYWTDEDRKAILRCHLNGTGSEAIITENLEQSD 410
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
GM +D R L+WTD G N + ++G++R +I T+I P + +D YF
Sbjct: 411 GMAIDWV--ARNLYWTDTGRN-YVAVARLNGTSRRILIETEIDEPRAIVVDPTAG--YF- 464
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
YW D G N KI + MDG+N + V L
Sbjct: 465 ---------------------------YWTDWGENP---KIERVEMDGTNRILFVRKHLK 494
Query: 316 --EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
LA+D +G WL+W D + +IERI +DG+ R ++S KI P+
Sbjct: 495 WPNGLAIDHTHG-----------WLYWADASLD-KIERIKLDGTQRKMLVSGKI--PHIF 540
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
I +Y+AD + I+ G R + ILID +
Sbjct: 541 GFSILGNYLYWADWQRRRIERMRI-GDPRSREILIDQL 577
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 121/247 (48%), Gaps = 24/247 (9%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQD-----MNECEQPGYCSQM---- 83
C G CS+ C TP G C+CP G L+ +S C + + G ++
Sbjct: 597 CARNNGGCSHLCLYTPEGPRCSCPTGLELAINSHQCVVPEAYLLYSLPKVGGIKEISLDT 656
Query: 84 CTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDI 143
N K E Y+L++ +++ S + +N + ++ G + +
Sbjct: 657 AQNDKSLPFNKPVEAYLLDF------SVDDSMVYW--TNTRDMTISRAFMNGSN--VERF 706
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP 203
+ G+++++G+A DWIG +++W D++ NRIEV +GT+R + + P + +DP+
Sbjct: 707 IDIGIEILQGVAVDWIGRNVFWADAQANRIEVARMDGTSRRPIIWQGLDSPACIAMDPAN 766
Query: 204 GTRWLFWTDWGENPRIERIGMDGSN--RSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++W++WG + I+R +DGSN R T I + + LT+D RR+Y+ D +
Sbjct: 767 G--YIYWSEWGTDTCIKRANLDGSNVVRLTQIG-DVGRASSLTIDYEDRRIYWVDYDSNM 823
Query: 262 IDCKSLE 268
I +E
Sbjct: 824 IMSSDME 830
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 144/353 (40%), Gaps = 85/353 (24%)
Query: 78 GYCSQMCTNTKG-SYICSCNEGYVLEY-DNHTCKAINHSAAFLIISNRHSI--------- 126
G C +C + G +Y C C Y L DN +C A FL++S I
Sbjct: 911 GGCQYLCLSLPGGNYTCECPAHYTLNLLDNSSCVA---PLNFLLVSQTSYISRIVFESSE 967
Query: 127 ------------LVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
A +E K + + GL + YD I IYW+D I+
Sbjct: 968 GVLGVIPGAEIDQRAVYDENAKPTPDAVLPIKGLKDACSIDYDPIERTIYWIDCATGEIK 1027
Query: 175 VCDENGTNRIVLAKDNIT----QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS 230
C +NGT+ VL + + +P + ++P TR L+WTD N I+ + ++G+
Sbjct: 1028 SCRDNGTDARVLVANRGSNGSNRPHDLAVEPY--TRHLYWTDSLSN-SIQMMNLNGTMIG 1084
Query: 231 TIISTKI------------YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
T++S K+ P +T+D R+YF+++ D C+
Sbjct: 1085 TVLSGKLNAQGVGNGKYIDIMPRKITIDSMKGRIYFSNTCHDTKSCR------------- 1131
Query: 279 FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWL 338
KI ++ +DGS+ L S L+ A+ +++ ++ L
Sbjct: 1132 ---------------FKILQSALDGSDCIELFSHNLHNVSAMVVDSQ---------SKRL 1167
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+W+D + IE DGS+R+T+I I P GL + +Y+ DS++D
Sbjct: 1168 YWSD-PDREVIEWSNTDGSHRTTLIENSISQPVGLA--VFGDSIYWVDSQIDV 1217
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 90/191 (47%), Gaps = 26/191 (13%)
Query: 231 TIISTKIYWPNGLTLDIATRRVYFADSKLD-FIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
++ + +YW N T D+ R + S ++ FID +EI V I R ++W D
Sbjct: 677 SVDDSMVYWTN--TRDMTISRAFMNGSNVERFIDI-GIEILQGVAVDWIGRNVFWADAQA 733
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEA--LALDLENGMLYYSTLKCTRWLFWTDWGENP 347
N +I A MDG++ ++ L +A+D NG +Y W++WG +
Sbjct: 734 N----RIEVARMDGTSRRPIIWQGLDSPACIAMDPANGYIY-----------WSEWGTDT 778
Query: 348 RIERIGMDGSN--RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
I+R +DGSN R T I + + LT+D RR+Y+ D + I + D GR +
Sbjct: 779 CIKRANLDGSNVVRLTQIG-DVGRASSLTIDYEDRRIYWVDYDSNMI--MSSDMEGRNLI 835
Query: 406 ILIDLMVEFTN 416
+I++ E N
Sbjct: 836 EVINVADEPGN 846
>gi|344277491|ref|XP_003410534.1| PREDICTED: LOW QUALITY PROTEIN: pro-epidermal growth factor-like
[Loxodonta africana]
Length = 1163
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 137/295 (46%), Gaps = 48/295 (16%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C L C CS+ C T G +C CP G +L D C +
Sbjct: 383 CPVGFILLPDGKRCHQLDSCPSNASECSHDCVLTSDGPVCFCPEGSVLEADGKMCSGCSS 442
Query: 74 CEQPGYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN----RH---- 124
+ G CSQ+C + S+ C C GY L+ D +C A + FL+ +N RH
Sbjct: 443 SDNGG-CSQLCLPLSPVSWECGCFPGYDLQLDKKSCAA-SGPQPFLLFANSQDIRHMHFD 500
Query: 125 ----SILVAD--------------------------LEEKGKD-HRAQDIVVSGLDLVEG 153
ILV+ +E D + + ++ +D+ EG
Sbjct: 501 GTDYEILVSQQMGMVFALDHDPVENKIYFANTALKWIERANLDGSKRERLIGDAVDVPEG 560
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
LA DWI +YW D IE D NGT R ++ +I+QPRG+ + P + LFWTD
Sbjct: 561 LAVDWINRKLYWTDRGKALIERSDLNGTQREIIINKHISQPRGIAVHPM--AKRLFWTDM 618
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
G NPRIE + GS+R I S+ + P+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 619 GINPRIESSSLQGSDRRVIASSDLVQPSGITIDYLTDKLYWCDAKQSVIEVANLD 673
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 181/433 (41%), Gaps = 69/433 (15%)
Query: 19 PNGADEGPGCDLAECKHKFGLCSNT-CHPTPLGALCTCPPGEILSNDSVTCQDMNECEQP 77
P ++ D CK K G+C + C +CTC G LS D C+D+NEC
Sbjct: 305 PKAKNDAGESDQKLCKLKKGICRGSVCGQDLRNHVCTCAEGYTLSRDGKYCEDVNECALW 364
Query: 78 GY-CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD----LE 132
+ C+ C NT GSY C+C G++L D C ++ + + +L +D
Sbjct: 365 NHGCTLGCENTPGSYYCTCPVGFILLPDGKRCHQLDSCPSNASECSHDCVLTSDGPVCFC 424
Query: 133 EKGKDHRAQDIVVSGLDLVEG----------LAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
+G A + SG + W G D +L++ + C +G
Sbjct: 425 PEGSVLEADGKMCSGCSSSDNGGCSQLCLPLSPVSWECGCFPGYDLQLDK-KSCAASGPQ 483
Query: 183 RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 242
+L + + I + DG++ ++S ++
Sbjct: 484 PFLL--------------------------FANSQDIRHMHFDGTDYEILVSQQMGMVFA 517
Query: 243 LTLDIATRRVYFADSKLDFIDCKSLE-------------IKTNVNYSTIFRKLYWIDEGG 289
L D ++YFA++ L +I+ +L+ + + I RKLYW D G
Sbjct: 518 LDHDPVENKIYFANTALKWIERANLDGSKRERLIGDAVDVPEGLAVDWINRKLYWTDRG- 576
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
I +++++G+ I+++ + + + + + LFWTD G NPRI
Sbjct: 577 ---KALIERSDLNGTQREIIINKHISQPRGIAVH---------PMAKRLFWTDMGINPRI 624
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
E + GS+R I S+ + P+G+T+D T ++Y+ D+K I+ N DG+ RQ++ D
Sbjct: 625 ESSSLQGSDRRVIASSDLVQPSGITIDYLTDKLYWCDAKQSVIEVANLDGSKRQRLAQND 684
Query: 410 LMVEFTNDLMGDN 422
+ F+ + D+
Sbjct: 685 VGHIFSVAVFEDH 697
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 35/183 (19%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
V G+A +WI I W + + I V D G N VL ++ P + +DP R++FW
Sbjct: 119 VSGMAINWINEEIIWSNQQEGVITVTDMKGNNSRVLLS-SLNYPANVAVDPV--ERFVFW 175
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
+ + R ++G++ ++ T LE
Sbjct: 176 SS-EVGSSLHRASLNGADAKILLET-------------------------------LEKI 203
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
T ++ + ++L+WI G IG + DG ++ + + A+ L ++YS
Sbjct: 204 TAMSLDVLNKRLFWIQYNKEGGYSYIGSCDYDGGSSQLHKHLTRHNLFAISLFGDRIFYS 263
Query: 331 TLK 333
TLK
Sbjct: 264 TLK 266
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 8/54 (14%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNECEQ-----PGYCSQMCTNTKGSYICSCNEGY 99
A C C G ++D C D++ECE+ P SQ C NT+G Y+C C EGY
Sbjct: 857 ATCQCLKG--FADDGKLCSDIDECEKNITVCPAASSQ-CINTEGGYVCRCLEGY 907
>gi|170029099|ref|XP_001842431.1| low-density lipoprotein receptor [Culex quinquefasciatus]
gi|167880638|gb|EDS44021.1| low-density lipoprotein receptor [Culex quinquefasciatus]
Length = 1672
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 116/228 (50%), Gaps = 51/228 (22%)
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
+GLA DW+ ++YW D+ +RI+VC +GT R VL +N+ +PR + L P+ G W+FW+
Sbjct: 434 DGLAVDWLARNLYWTDTGTDRIQVCRLDGTFRRVLIYENLEEPRAIALAPTLG--WMFWS 491
Query: 212 DWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
DW E +P+IER +DG+ R I+ + WPNG+ LD+ R++Y+ D+KLD I+
Sbjct: 492 DWSEKDPKIERASLDGTERVLIVQQNLGWPNGIALDVEARKIYWCDAKLDRIEV------ 545
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
ANMDGS +I++S L A L L LY
Sbjct: 546 ----------------------------ANMDGSGRNIIISDNLPHAFGLSLLGDYLY-- 575
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 378
WTDW ++G++R+ I+ + +P+ + L +A
Sbjct: 576 ---------WTDWQRRSIDRANKINGNDRTVIVES---FPDLMGLKVA 611
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 103/227 (45%), Gaps = 51/227 (22%)
Query: 122 NRHSILVADLEEKGKDHRAQDIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG 180
N +I A + + + V+S GLD EGLA DW +YW D NRIEV NG
Sbjct: 96 NTETIQCAQMRQDQSSSVNKTAVISHGLDKPEGLAIDWYTDKLYWTDGETNRIEVATLNG 155
Query: 181 TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG--SNRSTIISTKIY 238
+ VL ++ QPR + L P +++ WTDWGE+P+IER MDG +R+ ++ +I+
Sbjct: 156 RFQKVLVWSDLDQPRAIAL--VPARQFMIWTDWGESPKIERASMDGDPQSRTVLVHDRIF 213
Query: 239 WPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGK 298
WPNGL +D+ +Y+ D L F+D
Sbjct: 214 WPNGLAVDLEHELIYWVDGNLHFLDV---------------------------------- 239
Query: 299 ANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
N+DGSN LV+ Y YS +LFWTDW +
Sbjct: 240 MNLDGSNRRTLVNNLEYP------------YSLTFAPNFLFWTDWQD 274
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 111/227 (48%), Gaps = 45/227 (19%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D P +++W+D G N I+++ DG+ +++T+I P+GL +D
Sbjct: 390 AIAIDYDPVDNYIYWSDEGSNA-IKKVRPDGTGMVEVVNTEILGPDGLAVDW-------- 440
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ R LYW D G + +I +DG+ +L+ L
Sbjct: 441 ----------------------LARNLYWTDTGTD----RIQVCRLDGTFRRVLIYENLE 474
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLT 374
E A+ L + W+FW+DW E +P+IER +DG+ R I+ + WPNG+
Sbjct: 475 EPRAIALAPTL---------GWMFWSDWSEKDPKIERASLDGTERVLIVQQNLGWPNGIA 525
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
LD+ R++Y+ D+KLD I+ N DG+GR +I +L F L+GD
Sbjct: 526 LDVEARKIYWCDAKLDRIEVANMDGSGRNIIISDNLPHAFGLSLLGD 572
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 141/335 (42%), Gaps = 85/335 (25%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTC----------------------KAINHS- 114
G CSQ+C N Y+C C Y L+ DN TC + NH+
Sbjct: 627 GGCSQLCLNRPRDYVCRCQIDYELDRDNRTCFIPSAFLLFSRHDTGSIGRISIDSHNHTD 686
Query: 115 -AAFLIISNRH--SILVADL------EEKGKDHRA-------QDIVVSGLDLVEGLAYDW 158
A F + + H + +AD +++ RA + IV SGL EG+A DW
Sbjct: 687 YAPFRSVIDAHYLDVDIADRRIYWASQKQKHISRAYINGSNVEKIVESGLIQPEGIAVDW 746
Query: 159 IGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPR 218
+ +IYW D+ RIEV +G++R +L I +PR ++L+P G ++W +W +
Sbjct: 747 LAHNIYWTDAEARRIEVARLDGSSRRILIWKGIEEPRNLILEPRRGL--MYWAEWPSD-S 803
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
I R MDGS TIIS GLTLD TRR+Y+A C+S
Sbjct: 804 IRRAVMDGSELKTIISGA-NLATGLTLDPDTRRLYWA--------CQS------------ 842
Query: 279 FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWL 338
P I A DG+ ILV+ D +N + ++ ++
Sbjct: 843 -------------SPTAIESAEWDGNKRKILVTA--------DTDNPFVPHAVTLYKDYV 881
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
+W+DW IER TI+ T + + N L
Sbjct: 882 YWSDWNTG-EIERANKSSGENRTIVHTGLKYTNSL 915
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 90/183 (49%), Gaps = 29/183 (15%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFW 340
KLYW D N +I A ++G +LV L + A+ L + +++ W
Sbjct: 137 KLYWTDGETN----RIEVATLNGRFQKVLVWSDLDQPRAIAL---------VPARQFMIW 183
Query: 341 TDWGENPRIERIGMDG--SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
TDWGE+P+IER MDG +R+ ++ +I+WPNGL +D+ +Y+ D L F+D N D
Sbjct: 184 TDWGESPKIERASMDGDPQSRTVLVHDRIFWPNGLAVDLEHELIYWVDGNLHFLDVMNLD 243
Query: 399 GTGRQQVI---LIDLMVEFTNDLMGDNGVPALALDLENGMLYY----STEGAEFLKTPLF 451
G+ R+ ++ + F + + D ++G L+Y S + E +P+
Sbjct: 244 GSNRRTLVNNLEYPYSLTFAPNFL-------FWTDWQDGTLHYYNIASEKHEEIFDSPVV 296
Query: 452 CIT 454
IT
Sbjct: 297 PIT 299
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 133/322 (41%), Gaps = 62/322 (19%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
IV L G+A D IYW D++L+RIEV + +G+ R ++ DN+ G+ L
Sbjct: 513 IVQQNLGWPNGIALDVEARKIYWCDAKLDRIEVANMDGSGRNIIISDNLPHAFGLSL--- 569
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT------------- 249
+L+WTDW ++G++R+ I+ + +P+ + L +A
Sbjct: 570 -LGDYLYWTDWQRRSIDRANKINGNDRTVIVES---FPDLMGLKVAKLGEVKGTNPCARG 625
Query: 250 -----------RRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGK 298
R Y ++D+ E+ + I G IG+
Sbjct: 626 NGGCSQLCLNRPRDYVCRCQIDY------ELDRDNRTCFIPSAFLLFSRHDTG---SIGR 676
Query: 299 ANMDGSNASILVSGQ-LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGS 357
++D N + + + +A LD++ R ++W + I R ++GS
Sbjct: 677 ISIDSHNHTDYAPFRSVIDAHYLDVD---------IADRRIYWASQKQK-HISRAYINGS 726
Query: 358 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
N I+ + + P G+ +D +Y+ D++ I+ DG+ R+ ILI +E +
Sbjct: 727 NVEKIVESGLIQPEGIAVDWLAHNIYWTDAEARRIEVARLDGSSRR--ILIWKGIEEPRN 784
Query: 418 LMGDNGVPALALDLENGMLYYS 439
L+ L+ G++Y++
Sbjct: 785 LI---------LEPRRGLMYWA 797
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 105/270 (38%), Gaps = 62/270 (22%)
Query: 72 NECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
N+C G CS +C + C+C Y L + +C + ++I S R+S
Sbjct: 927 NQCRTNNGGCSHLCLALGQRKMTCACPTHYTLNANRVSCSPPKN---YIIFSQRNSF--G 981
Query: 130 DLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
D + V+G + + + YD + +YW+D R I +NGT+ V D
Sbjct: 982 RFMPNTTDSPDVPLPVTGKN-IRAVEYDVLTRFVYWIDGRGPIIRRAFDNGTSAKVFI-D 1039
Query: 190 NITQPRGMMLDP-------------------------------------------SPGTR 206
+ P M++DP P R
Sbjct: 1040 PASSPFDMVIDPIGRLLFWSCSHTNTINITTLDGEIERIGNVDIGPSEKPRSLALHPSKR 1099
Query: 207 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK-LDFIDCK 265
LFWTD G I R +DGS R ++S K+ L LD R+++A K +D +D +
Sbjct: 1100 LLFWTDVGTAQSIIRAKLDGSQRRELVS-KLEGITALALDPQLNRLFYAHGKRIDMVDIE 1158
Query: 266 SLEIKTNV--------NYSTIFRKLYWIDE 287
EIKT V + + + +YW+DE
Sbjct: 1159 GREIKTLVAEHISLVSSIAALNGYIYWLDE 1188
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 33/165 (20%)
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN-------------VN 274
N++ +IS + P GL +D T ++Y+ D + + I+ +L + +
Sbjct: 114 NKTAVISHGLDKPEGLAIDWYTDKLYWTDGETNRIEVATLNGRFQKVLVWSDLDQPRAIA 173
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS--ILVSGQLY--EALALDLENGMLYYS 330
+ + W D G + KI +A+MDG S +LV +++ LA+DLE+ ++Y
Sbjct: 174 LVPARQFMIWTDWGESP---KIERASMDGDPQSRTVLVHDRIFWPNGLAVDLEHELIY-- 228
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
W D G ++ + +DGSNR T+++ + +P LT
Sbjct: 229 ---------WVD-GNLHFLDVMNLDGSNRRTLVN-NLEYPYSLTF 262
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 68/166 (40%), Gaps = 30/166 (18%)
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTRW 337
R++YW + I +A ++GSN +V L E +A+D +Y
Sbjct: 706 RRIYWASQKQK----HISRAYINGSNVEKIVESGLIQPEGIAVDWLAHNIY--------- 752
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
WTD E RIE +DGS+R +I I P L L+ +Y+A+ D I
Sbjct: 753 --WTD-AEARRIEVARLDGSSRRILIWKGIEEPRNLILEPRRGLMYWAEWPSDSIRRAVM 809
Query: 398 DGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGA 443
DG+ E + G N L LD + LY++ + +
Sbjct: 810 DGS------------ELKTIISGANLATGLTLDPDTRRLYWACQSS 843
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 51/119 (42%), Gaps = 12/119 (10%)
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK-LDFIDF 394
R LFWTD G I R +DGS R ++S K+ L LD R+++A K +D +D
Sbjct: 1099 RLLFWTDVGTAQSIIRAKLDGSQRRELVS-KLEGITALALDPQLNRLFYAHGKRIDMVDI 1157
Query: 395 CNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG----AEFLKTP 449
GR+ L+ + + + NG LD GM S G E K P
Sbjct: 1158 -----EGREIKTLVAEHISLVSSIAALNGY-IYWLDERPGMERISVLGENRRTEIQKIP 1210
>gi|449678423|ref|XP_004209085.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Hydra magnipapillata]
Length = 1463
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 173/430 (40%), Gaps = 100/430 (23%)
Query: 4 RCVNLTKVCDGKTDC------PNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGA-LCTC 55
+C+ +CD K DC N DE P C ++C++K C C P G +C C
Sbjct: 211 KCIPNAFLCDEKEDCDKNSNQANSDDENPSMCYQSKCENK---CEYKCQKQPNGVGICLC 267
Query: 56 PPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA 115
P LS D+ TC +N+C+ CSQ+C + C C G+VLE + C+ I+
Sbjct: 268 PSLYKLSPDNHTCTIVNQCDN-NVCSQLCKMVGNDFQCGCFPGHVLE-NKTDCRYIDSGD 325
Query: 116 AFLII--------------------------------SNRHSILVADLEEK--------- 134
LI SN + D+ E
Sbjct: 326 IELIYVDIKVIKRYNLRTGLHTSLVTSMTRGVALDYDSNSSKLFYTDVTENLIKSVYLHG 385
Query: 135 -GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
K ++V +GL + +G+A DWI ++Y+ +S I+V +G R L D +
Sbjct: 386 DSKTINEVNLVKTGLAVPDGIAVDWITKNVYFAESSAKSIDVVSYDGKMRAPLISDGLVS 445
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
PRG+ +DP G +LF TDWG ++ R MDG+N + + WPNG+T+D + VY
Sbjct: 446 PRGLAVDPKKG--YLFITDWGGVAKVLRSQMDGTNLQVLATENGGWPNGITIDYSMEIVY 503
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+ D++ D+ID N +G+ ++ G+
Sbjct: 504 WIDARFDYID----------------------------------SMNYNGTQRRTVIKGK 529
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
Y A ++ +L++TDW + ++ GS +II + P +
Sbjct: 530 QYVAHP---------FAITVFEDYLYFTDWMKKGIVKVHKQKGSEDYSIILGNLSRPMDI 580
Query: 374 TLDIATRRVY 383
+ R+ Y
Sbjct: 581 QVLTTGRQFY 590
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 76/125 (60%), Gaps = 6/125 (4%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRL---NRIEVCDENGTNRIVLAKDNITQPRGMML 199
+V L+ +G+A DW+G ++YW + ++ + I V +G + L ++ I +PR +++
Sbjct: 710 VVSEHLENTDGVAVDWVGRNLYWTNYKVKGGSEISVSKLDGKYQKTLLQEEIYKPRAIVV 769
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSK 258
PS G +LF+TDW +I R +DG+N +++ T + WPNGL LD +VY+ D+K
Sbjct: 770 HPSMG--YLFYTDWFAPAKIGRANLDGTNHVILVNLTDLIWPNGLALDYDENKVYWTDAK 827
Query: 259 LDFID 263
+D I+
Sbjct: 828 IDRIE 832
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 27/182 (14%)
Query: 242 GLTLDIATRRVYFADSKLD----------------FIDCKSLEIKTNVNYSTIFRKLYWI 285
G+ D +YF+D KLD ++ + LE V + R LYW
Sbjct: 674 GVDFDTLEEYIYFSDVKLDKIGRVYIGNDSGGDIEWVVSEHLENTDGVAVDWVGRNLYWT 733
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
+ G +I + +DG L+ ++Y+ A+ + M Y LF+TDW
Sbjct: 734 NYKVKGGS-EISVSKLDGKYQKTLLQEEIYKPRAIVVHPSMGY---------LFYTDWFA 783
Query: 346 NPRIERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQ 404
+I R +DG+N +++ T + WPNGL LD +VY+ D+K+D I+ ++DG R
Sbjct: 784 PAKIGRANLDGTNHVILVNLTDLIWPNGLALDYDENKVYWTDAKIDRIESMDFDGRNRVV 843
Query: 405 VI 406
VI
Sbjct: 844 VI 845
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 136/322 (42%), Gaps = 77/322 (23%)
Query: 79 YCSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
+C +C ++ + C C Y L+ D ++C+ ++ FLI + + L+
Sbjct: 604 FCQHLCVIKSQYEFACLCKYRYRLKDDGYSCEFVD---TFLIFARSWEVRGISLDST--- 657
Query: 138 HRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLN---RIEVCDENGTNRIVLAKDNIT 192
+ D+ + GL+ G+ +D + +IY+ D +L+ R+ + +++G + + +++
Sbjct: 658 -YSYDVTIPILGLNSAVGVDFDTLEEYIYFSDVKLDKIGRVYIGNDSGGDIEWVVSEHLE 716
Query: 193 QPRGMMLDPSPGTRWLFWTDWGEN--PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
G+ +D R L+WT++ I +DG + T++ +IY P + + +
Sbjct: 717 NTDGVAVDWV--GRNLYWTNYKVKGGSEISVSKLDGKYQKTLLQEEIYKPRAIVVHPSMG 774
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
+++ D W P KIG+AN+DG+N ILV
Sbjct: 775 YLFYTD---------------------------WF------APAKIGRANLDGTNHVILV 801
Query: 311 SGQLY---EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS--- 364
+ LALD + +Y WTD + RIE + DG NR +I+
Sbjct: 802 NLTDLIWPNGLALDYDENKVY-----------WTD-AKIDRIESMDFDGRNRVVVIANTQ 849
Query: 365 ---------TKIYWPNGLTLDI 377
T IYW + L+ +I
Sbjct: 850 HSFGLALDDTYIYWTDWLSKEI 871
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ G++ EG+A DW+ +IYW D RL+ IEV +GT R VL +I PR + +DP
Sbjct: 1402 IISQGMNSPEGIAIDWVAENIYWSDMRLDTIEVARLDGTMRSVLISYDIDAPRALAVDPR 1461
Query: 203 PG 204
G
Sbjct: 1462 YG 1463
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
L+W+D G + +IER+ ++GS R IIS + P G+ +D +Y++D +LD I+
Sbjct: 1379 LYWSDVGTD-KIERMFLNGSGREVIISQGMNSPEGIAIDWVAENIYWSDMRLDTIEVARL 1437
Query: 398 DGTGRQQVILIDL 410
DGT R +I D+
Sbjct: 1438 DGTMRSVLISYDI 1450
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 10/127 (7%)
Query: 143 IVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
I+V+ DL+ GLA D+ +YW D++++RIE D +G NR+V+ N G+ LD
Sbjct: 799 ILVNLTDLIWPNGLALDYDENKVYWTDAKIDRIESMDFDGRNRVVVIA-NTQHSFGLALD 857
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
+ +++WTDW E + +N S + + + + + I R+V ++
Sbjct: 858 DT----YIYWTDWLSK---EILRAKKNNISDVNVLRNSYSGLMEIQIYNRKVQKGNNICA 910
Query: 261 FIDCKSL 267
C+ L
Sbjct: 911 VAKCEQL 917
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 122/275 (44%), Gaps = 14/275 (5%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
+ +C++ +CD DC + +DE C+ EC C N H L C
Sbjct: 1170 SQKCISNRFLCDYIKDCDDASDE-INCNYTECTAGHFQCQNK-HCILLSHRCDNTDDCGD 1227
Query: 62 SNDSVTCQDMNE--CEQPGYCSQMCTNTKGSYICS-CNEGY---VLEYDNHTCKAINHSA 115
++D V+C + E C+ + Q +TK I S CNE + + + CK A
Sbjct: 1228 NSDEVSCGSLVEKTCKDTEWKCQ--NSTKCIPIASVCNEVNDCPLSDDEGPLCKLNGWVA 1285
Query: 116 AFLIISN-RHSILVADLEEKGKDHRAQDIVVSGL-DLVEGLAYDWIGGHIYWLDSRLNRI 173
F++IS +S V HR I +S L +V +++ I + + + +
Sbjct: 1286 LFVLISYWAYSAAVDQDTYYLMIHRLVKISMSVLLIMVCVVSFAMIPKGLISANVQKDTF 1345
Query: 174 EVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
V + + +V + +Q + + R L+W+D G + +IER+ ++GS R II
Sbjct: 1346 YVKEVSHVQLVVQVQVLFSQMVNQYVRSTQQQR-LYWSDVGTD-KIERMFLNGSGREVII 1403
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
S + P G+ +D +Y++D +LD I+ L+
Sbjct: 1404 SQGMNSPEGIAIDWVAENIYWSDMRLDTIEVARLD 1438
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 18/119 (15%)
Query: 338 LFWTDWGENPRIERIGMDGSNRS----TIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
LF+TD EN I+ + + G +++ ++ T + P+G+ +D T+ VYFA+S ID
Sbjct: 368 LFYTDVTEN-LIKSVYLHGDSKTINEVNLVKTGLAVPDGIAVDWITKNVYFAESSAKSID 426
Query: 394 FCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG--AEFLKTPL 450
+YDG R +I ++ L+ G LA+D + G L+ + G A+ L++ +
Sbjct: 427 VVSYDGKMRAPLI--------SDGLVSPRG---LAVDPKKGYLFITDWGGVAKVLRSQM 474
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 162 HIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIER 221
+YW D ++IE NG+ R V+ + P G+ +D ++W+D + IE
Sbjct: 1378 RLYWSDVGTDKIERMFLNGSGREVIISQGMNSPEGIAIDWVAEN--IYWSDMRLDT-IEV 1434
Query: 222 IGMDGSNRSTIISTKIYWPNGLTLD 246
+DG+ RS +IS I P L +D
Sbjct: 1435 ARLDGTMRSVLISYDIDAPRALAVD 1459
>gi|390460524|ref|XP_003732498.1| PREDICTED: pro-epidermal growth factor [Callithrix jacchus]
Length = 1167
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 130/281 (46%), Gaps = 48/281 (17%)
Query: 30 LAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQP--GYCSQMCTN- 86
L C CS+ C T G LC CP G +L D TC + C P G CSQ+C
Sbjct: 398 LVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SGCSSPDNGGCSQLCIPL 454
Query: 87 TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI-------------------L 127
+ ++ C C GY L+ D +C A + FL+ +N I +
Sbjct: 455 SPVAWECDCFPGYDLQLDKKSCAA-SGPQPFLLFANSQDIRQMHFDGTDYGTLLSQQMGM 513
Query: 128 VADLEEKGKDHR--------------------AQDIVVSGLDLVEGLAYDWIGGHIYWLD 167
V L+ +++ + ++ +D+ EGLA DWIG YW D
Sbjct: 514 VYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEETVDVPEGLAVDWIGRRFYWTD 573
Query: 168 SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227
+ I D NG + ++ K+ ++QPRG+ + P + LFWTD G NPRIE + G
Sbjct: 574 RGKSLIGRSDLNGKHPEIIIKETMSQPRGIAVHPM--AKRLFWTDTGINPRIESSSLQGL 631
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
R + S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 632 GRLVLASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLD 672
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 179/442 (40%), Gaps = 89/442 (20%)
Query: 19 PNGADEGPGCDLAECKHKFGLCSNT-CHPTPLGALCTCPPGEILSNDSVTCQDMNECEQP 77
P D+ + CK + G CS+T C P LCTC G LS D C+D+NEC
Sbjct: 304 PTAEDDTQKPEQKLCKSRKGNCSSTVCGQDPQSHLCTCTEGYALSRDRKYCEDVNECAFW 363
Query: 78 GY-CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD------ 130
+ C+ C NT GSY C+C G+V+ D C + + + + +L ++
Sbjct: 364 NHGCTLGCKNTPGSYYCTCPVGFVVLLDGKRCHQLVSCPSNVSECSHDCVLTSEGPLCFC 423
Query: 131 -----LEEKGK--------DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
LE GK D+ + L V D G+ LD + C
Sbjct: 424 PEGSVLERDGKTCSGCSSPDNGGCSQLCIPLSPV-AWECDCFPGYDLQLDKK-----SCA 477
Query: 178 ENGTNRIVLAKDN----------------ITQPRGMM--LDPSPGTRWLFWTDWGENPRI 219
+G +L ++ ++Q GM+ LD P +++ I
Sbjct: 478 ASGPQPFLLFANSQDIRQMHFDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALK-WI 536
Query: 220 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIF 279
ER MDGS R +I + P GL +D I
Sbjct: 537 ERANMDGSQRERLIEETVDVPEGLAVDW------------------------------IG 566
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLF 339
R+ YW D G + IG+++++G + I++ + + + + + LF
Sbjct: 567 RRFYWTDRGKS----LIGRSDLNGKHPEIIIKETMSQPRGIAVH---------PMAKRLF 613
Query: 340 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
WTD G NPRIE + G R + S+ + WP+G+T+D T ++Y+ D+K I+ N DG
Sbjct: 614 WTDTGINPRIESSSLQGLGRLVLASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLDG 673
Query: 400 TGRQQVILIDLMVEFTNDLMGD 421
+ R+++ D+ F + D
Sbjct: 674 SKRRRLTQNDVGHPFALAVFQD 695
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 108/258 (41%), Gaps = 37/258 (14%)
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEG 153
SC+EG N TC A FLI S+ +SI D E + ++ VS +
Sbjct: 27 SCSEGTPAGNGNSTCVG---PAPFLIFSHGNSIFRIDTEGTNYEQLVKNAGVSVI----- 78
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRWL--- 208
+ + + IYW+D ++ NG+ R+ + N++ GM ++ W+
Sbjct: 79 MDFHYSEKIIYWVDLERQLLQRVFLNGSRQERVCNIEKNVS---GMAIN------WINEE 129
Query: 209 -FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKL 259
W++ E I M G+N S ++ + + P + +D R ++++ + L
Sbjct: 130 VIWSNQQEG-IITVTDMKGNN-SHVLFSALKDPANIAVDPVERFLFWSSEVAGSLHRADL 187
Query: 260 DFIDCKSL----EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D ++ K L E T V+ + ++L+WI G I + DG + + +
Sbjct: 188 DGVEVKVLLETSEKITAVSLDVLDKRLFWIQYNREGSNSLICSCDYDGGSVQMSKHHTQH 247
Query: 316 EALALDLENGMLYYSTLK 333
A+ L ++YST K
Sbjct: 248 NLFAMSLFGDHIFYSTWK 265
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 10/55 (18%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNECEQ------PGYCSQMCTNTKGSYICSCNEGY 99
A+C C G + D C D++ECE P S C NT+G Y+C C+EGY
Sbjct: 853 AMCQCLKG--FAGDGKLCSDIDECEMGVPVCPPA--SSKCINTEGGYVCQCSEGY 903
>gi|83944676|gb|ABC48942.1| lipophorin receptor [Glossina morsitans morsitans]
Length = 391
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 124/256 (48%), Gaps = 66/256 (25%)
Query: 89 GSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVV-- 145
G + C C EGY+ + NHT CKA A+ L+++ RH D+ + DH +V
Sbjct: 3 GGFKCECMEGYMRDPRNHTHCKATEGHAS-LLLARRH-----DIRKIALDHMEMTSIVNN 56
Query: 146 ----SGLDLV--------------------------------------EGLAYDWIGGHI 163
+ LD V +GLA DWI HI
Sbjct: 57 TKSATALDFVFRTGMIFWSDVSTQSIYKAPIDEGNEKTVVLKASSVTSDGLAVDWIYNHI 116
Query: 164 YWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIG 223
Y+ D+ IE+ + +G VL +D + PR + LDP G W++W+DWG +PRIER G
Sbjct: 117 YFTDTHKGTIELTNFDGNMGKVLIEDELDIPRSIALDPIEG--WMYWSDWGASPRIERAG 174
Query: 224 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE--IKTNVNYSTIFRK 281
MDG++R+TI++ + WPNG+TLD+ +R+Y+ D KL+ I + + + + YST + +
Sbjct: 175 MDGTHRTTIVNYDVKWPNGITLDMVRKRIYWVDGKLNIISSANYDGSQRRQILYSTEYLR 234
Query: 282 -----------LYWID 286
+YW D
Sbjct: 235 HPFSITTFEDYIYWTD 250
>gi|296195776|ref|XP_002745535.1| PREDICTED: pro-epidermal growth factor isoform 2 [Callithrix
jacchus]
Length = 1166
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 130/281 (46%), Gaps = 48/281 (17%)
Query: 30 LAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQP--GYCSQMCTN- 86
L C CS+ C T G LC CP G +L D TC + C P G CSQ+C
Sbjct: 356 LVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SGCSSPDNGGCSQLCIPL 412
Query: 87 TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI-------------------L 127
+ ++ C C GY L+ D +C A + FL+ +N I +
Sbjct: 413 SPVAWECDCFPGYDLQLDKKSCAA-SGPQPFLLFANSQDIRQMHFDGTDYGTLLSQQMGM 471
Query: 128 VADLEEKGKDHR--------------------AQDIVVSGLDLVEGLAYDWIGGHIYWLD 167
V L+ +++ + ++ +D+ EGLA DWIG YW D
Sbjct: 472 VYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEETVDVPEGLAVDWIGRRFYWTD 531
Query: 168 SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227
+ I D NG + ++ K+ ++QPRG+ + P + LFWTD G NPRIE + G
Sbjct: 532 RGKSLIGRSDLNGKHPEIIIKETMSQPRGIAVHPM--AKRLFWTDTGINPRIESSSLQGL 589
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
R + S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 590 GRLVLASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLD 630
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 108/258 (41%), Gaps = 37/258 (14%)
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEG 153
SC+EG N TC A FLI S+ +SI D E + ++ VS +
Sbjct: 27 SCSEGTPAGNGNSTCVG---PAPFLIFSHGNSIFRIDTEGTNYEQLVKNAGVSVI----- 78
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRWL--- 208
+ + + IYW+D ++ NG+ R+ + N++ GM ++ W+
Sbjct: 79 MDFHYSEKIIYWVDLERQLLQRVFLNGSRQERVCNIEKNVS---GMAIN------WINEE 129
Query: 209 -FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKL 259
W++ E I M G+N S ++ + + P + +D R ++++ + L
Sbjct: 130 VIWSNQQEG-IITVTDMKGNN-SHVLFSALKDPANIAVDPVERFLFWSSEVAGSLHRADL 187
Query: 260 DFIDCKSL----EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D ++ K L E T V+ + ++L+WI G I + DG + + +
Sbjct: 188 DGVEVKVLLETSEKITAVSLDVLDKRLFWIQYNREGSNSLICSCDYDGGSVQMSKHHTQH 247
Query: 316 EALALDLENGMLYYSTLK 333
A+ L ++YST K
Sbjct: 248 NLFAMSLFGDHIFYSTWK 265
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 10/55 (18%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNECEQ------PGYCSQMCTNTKGSYICSCNEGY 99
A+C C G + D C D++ECE P S C NT+G Y+C C+EGY
Sbjct: 811 AMCQCLKG--FAGDGKLCSDIDECEMGVPVCPPA--SSKCINTEGGYVCQCSEGY 861
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 4 RCVNLTKVCDGKTDCPNG-ADEGPGC-DLAECKHKFGLC---SNTCHPTPLGALCTCPPG 58
RCV+ + D C G A +G C D+ EC+ +C S+ C T G +C C G
Sbjct: 803 RCVSEGE--DAMCQCLKGFAGDGKLCSDIDECEMGVPVCPPASSKCINTEGGYVCQCSEG 860
Query: 59 EILSNDSVTCQDMNECEQPGY-CSQ--MCTNTKGSYICSC 95
D + C D++EC+ + C + CTNT+G Y C+C
Sbjct: 861 --YQGDGIHCLDIDECQLGVHGCGENASCTNTEGGYACTC 898
>gi|296195774|ref|XP_002745534.1| PREDICTED: pro-epidermal growth factor isoform 1 [Callithrix
jacchus]
Length = 1208
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 130/281 (46%), Gaps = 48/281 (17%)
Query: 30 LAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQP--GYCSQMCTN- 86
L C CS+ C T G LC CP G +L D TC + C P G CSQ+C
Sbjct: 398 LVSCPSNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SGCSSPDNGGCSQLCIPL 454
Query: 87 TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI-------------------L 127
+ ++ C C GY L+ D +C A + FL+ +N I +
Sbjct: 455 SPVAWECDCFPGYDLQLDKKSCAA-SGPQPFLLFANSQDIRQMHFDGTDYGTLLSQQMGM 513
Query: 128 VADLEEKGKDHR--------------------AQDIVVSGLDLVEGLAYDWIGGHIYWLD 167
V L+ +++ + ++ +D+ EGLA DWIG YW D
Sbjct: 514 VYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEETVDVPEGLAVDWIGRRFYWTD 573
Query: 168 SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227
+ I D NG + ++ K+ ++QPRG+ + P + LFWTD G NPRIE + G
Sbjct: 574 RGKSLIGRSDLNGKHPEIIIKETMSQPRGIAVHPM--AKRLFWTDTGINPRIESSSLQGL 631
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
R + S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 632 GRLVLASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLD 672
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 179/442 (40%), Gaps = 89/442 (20%)
Query: 19 PNGADEGPGCDLAECKHKFGLCSNT-CHPTPLGALCTCPPGEILSNDSVTCQDMNECEQP 77
P D+ + CK + G CS+T C P LCTC G LS D C+D+NEC
Sbjct: 304 PTAEDDTQKPEQKLCKSRKGNCSSTVCGQDPQSHLCTCTEGYALSRDRKYCEDVNECAFW 363
Query: 78 GY-CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD------ 130
+ C+ C NT GSY C+C G+V+ D C + + + + +L ++
Sbjct: 364 NHGCTLGCKNTPGSYYCTCPVGFVVLLDGKRCHQLVSCPSNVSECSHDCVLTSEGPLCFC 423
Query: 131 -----LEEKGK--------DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
LE GK D+ + L V D G+ LD + C
Sbjct: 424 PEGSVLERDGKTCSGCSSPDNGGCSQLCIPLSPV-AWECDCFPGYDLQLDKK-----SCA 477
Query: 178 ENGTNRIVLAKDN----------------ITQPRGMM--LDPSPGTRWLFWTDWGENPRI 219
+G +L ++ ++Q GM+ LD P +++ I
Sbjct: 478 ASGPQPFLLFANSQDIRQMHFDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALK-WI 536
Query: 220 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIF 279
ER MDGS R +I + P GL +D I
Sbjct: 537 ERANMDGSQRERLIEETVDVPEGLAVDW------------------------------IG 566
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLF 339
R+ YW D G + IG+++++G + I++ + + + + + LF
Sbjct: 567 RRFYWTDRGKS----LIGRSDLNGKHPEIIIKETMSQPRGIAVH---------PMAKRLF 613
Query: 340 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
WTD G NPRIE + G R + S+ + WP+G+T+D T ++Y+ D+K I+ N DG
Sbjct: 614 WTDTGINPRIESSSLQGLGRLVLASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLDG 673
Query: 400 TGRQQVILIDLMVEFTNDLMGD 421
+ R+++ D+ F + D
Sbjct: 674 SKRRRLTQNDVGHPFALAVFQD 695
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 108/258 (41%), Gaps = 37/258 (14%)
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEG 153
SC+EG N TC A FLI S+ +SI D E + ++ VS +
Sbjct: 27 SCSEGTPAGNGNSTCVG---PAPFLIFSHGNSIFRIDTEGTNYEQLVKNAGVSVI----- 78
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRWL--- 208
+ + + IYW+D ++ NG+ R+ + N++ GM ++ W+
Sbjct: 79 MDFHYSEKIIYWVDLERQLLQRVFLNGSRQERVCNIEKNVS---GMAIN------WINEE 129
Query: 209 -FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKL 259
W++ E I M G+N S ++ + + P + +D R ++++ + L
Sbjct: 130 VIWSNQQEG-IITVTDMKGNN-SHVLFSALKDPANIAVDPVERFLFWSSEVAGSLHRADL 187
Query: 260 DFIDCKSL----EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D ++ K L E T V+ + ++L+WI G I + DG + + +
Sbjct: 188 DGVEVKVLLETSEKITAVSLDVLDKRLFWIQYNREGSNSLICSCDYDGGSVQMSKHHTQH 247
Query: 316 EALALDLENGMLYYSTLK 333
A+ L ++YST K
Sbjct: 248 NLFAMSLFGDHIFYSTWK 265
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 10/55 (18%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNECEQ------PGYCSQMCTNTKGSYICSCNEGY 99
A+C C G + D C D++ECE P S C NT+G Y+C C+EGY
Sbjct: 853 AMCQCLKG--FAGDGKLCSDIDECEMGVPVCPPA--SSKCINTEGGYVCQCSEGY 903
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 4 RCVNLTKVCDGKTDCPNG-ADEGPGC-DLAECKHKFGLC---SNTCHPTPLGALCTCPPG 58
RCV+ + D C G A +G C D+ EC+ +C S+ C T G +C C G
Sbjct: 845 RCVSEGE--DAMCQCLKGFAGDGKLCSDIDECEMGVPVCPPASSKCINTEGGYVCQCSEG 902
Query: 59 EILSNDSVTCQDMNECEQPGY-CSQ--MCTNTKGSYICSC 95
D + C D++EC+ + C + CTNT+G Y C+C
Sbjct: 903 --YQGDGIHCLDIDECQLGVHGCGENASCTNTEGGYACTC 940
>gi|163914975|ref|NP_001106478.1| epidermal growth factor precursor [Xenopus (Silurana) tropicalis]
gi|158254254|gb|AAI54103.1| LOC100127663 protein [Xenopus (Silurana) tropicalis]
Length = 1051
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 147/339 (43%), Gaps = 62/339 (18%)
Query: 18 CPNG----ADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G D D C + CS+ C T G LCTCP G +LS D +C
Sbjct: 386 CPEGYVLLPDNKTCHDKTPCLTEHIECSHGCVQTTKGPLCTCPEGSVLSEDGKSCTG--- 442
Query: 74 CEQP--GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL--- 127
C P G CS +C + G++ C C GY L+ D C A + +L+ +N H I
Sbjct: 443 CTSPDNGGCSHICIMSGPGTWECDCFPGYNLQLDRKQCLA-SGPRPYLMFANVHDIRRIN 501
Query: 128 ------------------------VAD-----------LEEKGKDHRAQDIVVSG-LDLV 151
V D +E D + ++SG L +
Sbjct: 502 FDGTNYESVLDSQIGRVFALDYDPVEDRMYFAHTALKCIESANMDGSDRKKMISGDLSTL 561
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EGL D I +YW D + IE D NG R +L ++N QPRG+ + P + LFWT
Sbjct: 562 EGLTVDAINRKLYWTDRGKSCIERSDLNGKYRKILIQENNIQPRGICVHPL--AKKLFWT 619
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
G NPRIE ++GS R IIS + WP+G+T+D T +Y+ D+K I+ +L+
Sbjct: 620 HVGANPRIESSDLEGSEREVIISKDLIWPSGITVDHLTDVIYWCDAKKSVIESANLDGSN 679
Query: 272 NVNYS----------TIFRKLYWIDEGGNGVPLKIGKAN 300
++S ++F W+ + ++I K N
Sbjct: 680 RQSFSQNDVGHPFAISVFEDHLWVSDWVQPSLIRIEKRN 718
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 166/423 (39%), Gaps = 92/423 (21%)
Query: 40 CSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGSYICSCNEG 98
C+ TC C C G +LS++ C+D+NEC + C+ C N GSY C+C EG
Sbjct: 330 CTKTCEIDAENQKCHCMNGFVLSSNGRYCEDINECALWNHGCTLGCENIPGSYFCTCPEG 389
Query: 99 YVLEYDNHTCK---------------AINHSAAFLIISNRHSILVAD---------LEEK 134
YVL DN TC + + L S+L D +
Sbjct: 390 YVLLPDNKTCHDKTPCLTEHIECSHGCVQTTKGPLCTCPEGSVLSEDGKSCTGCTSPDNG 449
Query: 135 GKDHRAQDIVVSG---------------LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDEN 179
G H ++SG LD + LA G Y + + ++ I + +
Sbjct: 450 GCSHIC---IMSGPGTWECDCFPGYNLQLDRKQCLAS---GPRPYLMFANVHDIRRINFD 503
Query: 180 GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYW 239
GTN + I + + DP + T IE MDGS+R +IS +
Sbjct: 504 GTNYESVLDSQIGRVFALDYDPVEDRMYFAHTAL---KCIESANMDGSDRKKMISGDLST 560
Query: 240 PNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKA 299
GLT+D I RKLYW D G + I ++
Sbjct: 561 LEGLTVD------------------------------AINRKLYWTDRGKSC----IERS 586
Query: 300 NMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNR 359
+++G IL+ + + + + LFWT G NPRIE ++GS R
Sbjct: 587 DLNGKYRKILIQENNIQPRGICVH---------PLAKKLFWTHVGANPRIESSDLEGSER 637
Query: 360 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLM 419
IIS + WP+G+T+D T +Y+ D+K I+ N DG+ RQ D+ F +
Sbjct: 638 EVIISKDLIWPSGITVDHLTDVIYWCDAKKSVIESANLDGSNRQSFSQNDVGHPFAISVF 697
Query: 420 GDN 422
D+
Sbjct: 698 EDH 700
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
G A DW I+W + + IE+ N VL + + P+ + +DP G LFW+
Sbjct: 121 GFAIDWKHNVIFWANQQKGTIELTSRNEKRSRVLLR-GLFNPKFVAIDPLEG--LLFWSS 177
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
I++ +DGSN ++II GLTLD +++++ SK+D D
Sbjct: 178 NKSWTIIQKATLDGSNVTSIIELSGAL-KGLTLDTDDKKIFWILSKIDRED 227
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 23/108 (21%)
Query: 12 CDGKTDCPNGADEGPGC--------------DLAECKHKFGLCS---NTCHPTPLGALCT 54
CD C + D GP C D+ EC C+ C T G +C
Sbjct: 810 CDINAHCVSSED-GPKCQCLEGFTGNGRLCHDIDECSLHIAACNPHQTECIDTEGGYICK 868
Query: 55 CPPGEILSNDSVTCQDMNECEQPGY-CSQ--MCTNTKGSYICSCNEGY 99
C G I + + C D++EC + + C + +CTNT+G+Y C+C G+
Sbjct: 869 CKYGYI--GNGLQCTDIDECSRGTHTCGENAVCTNTEGNYTCTCTNGF 914
>gi|326669972|ref|XP_003199120.1| PREDICTED: low-density lipoprotein receptor-like [Danio rerio]
Length = 599
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 136/298 (45%), Gaps = 45/298 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
+CV + CD +DC +G+DE CD EC G CS+TC P G C CP G L
Sbjct: 132 QCVPNSWRCDHSSDCKDGSDE-EDCDHNECAVNNGGCSHTCIDLPFGFRCDCPKGMRLVQ 190
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ C+ +++C C Q+C ++ GS +C C +GY L C+A A + +S +
Sbjct: 191 DT-HCEVVDQCLDADVCDQICVHSNGSVVCDCQDGYQLTAGTGQCRATG-GLAHVAVSTQ 248
Query: 124 HSILVADL----EEKGKDHRAQDIVVSGLDL----------------------------- 150
I + DL E D R VS L+
Sbjct: 249 EGIKMMDLSGSEERNITDKRLSPGPVSALNAHNTLYWSSPENDIIYRMSLDSGDHRPAVW 308
Query: 151 ------VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
+ GLA DWI +YW+ + + + T + +L +++P + + P G
Sbjct: 309 LKASKGIVGLAVDWIHESLYWISTSTRALHMASLKNTKQRLLIS-GLSKPTAVAVQPLLG 367
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
++FW + GE+ RIER+G+DG +R ++ + + P ++LDI +Y+ADS L I
Sbjct: 368 --YVFWAEGGESARIERVGLDGESRFALVVSFVRNPVAISLDIPRGLLYWADSGLRSI 423
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 164/419 (39%), Gaps = 102/419 (24%)
Query: 13 DGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLG-ALCTCPPGEILSND-----SV 66
DG+ DC +GADE + C++ P + TC G+ + N S
Sbjct: 96 DGRPDCADGADE-----------QLDTCTSFSQAQPCARSEFTCTNGQCVPNSWRCDHSS 144
Query: 67 TCQD--------MNECE-QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
C+D NEC G CS C + + C C +G L D H C+ ++
Sbjct: 145 DCKDGSDEEDCDHNECAVNNGGCSHTCIDLPFGFRCDCPKGMRLVQDTH-CEVVDQ---- 199
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVS---GLDLVEGLAY-DWIGGHIYWLDSRLNRI 173
L AD+ ++ H +V G L G GG + S I
Sbjct: 200 --------CLDADVCDQICVHSNGSVVCDCQDGYQLTAGTGQCRATGGLAHVAVSTQEGI 251
Query: 174 EVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW-----LFWTDWGENPRIERIGMD-GS 227
++ D +G+ + NIT R L P P + L+W+ EN I R+ +D G
Sbjct: 252 KMMDLSGSE-----ERNITDKR---LSPGPVSALNAHNTLYWSS-PENDIIYRMSLDSGD 302
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDE 287
+R + GL +D I LYWI
Sbjct: 303 HRPAVWLKASKGIVGLAVDW------------------------------IHESLYWIST 332
Query: 288 GGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
+ + A++ + +L+SG L + A+ ++ + Y +FW + GE+
Sbjct: 333 STRALHM----ASLKNTKQRLLISG-LSKPTAVAVQPLLGY---------VFWAEGGESA 378
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
RIER+G+DG +R ++ + + P ++LDI +Y+ADS L I +DG R+ V+
Sbjct: 379 RIERVGLDGESRFALVVSFVRNPVAISLDIPRGLLYWADSGLRSISRVLFDGQYRKTVV 437
>gi|322367795|gb|ADW95820.1| epidermal growth factor [Bubalus bubalis]
Length = 1220
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 131/298 (43%), Gaps = 53/298 (17%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C L C CS C T G +C+CP G +L D C
Sbjct: 382 CPEGYVLLPDGKWCHQLISCPSNMSECSQDCVLTSDGPICSCPEGSVLDTDGKICSG--- 438
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
C P G CSQ+CT + S+ C C GY L+ D +C+ + FL+ +N I
Sbjct: 439 CSSPDNGGCSQLCTPLSPVSWKCGCLPGYDLQLDKKSCRP-SGPPPFLLFANSQDIRYMH 497
Query: 131 LE--------------------------------------EKGKDHRAQD--IVVSGLDL 150
+ E+ +Q ++ + L
Sbjct: 498 FDGTDYGTLVHQQIIGMVFTLDHDPVENKIYFAHTVLKWIERANMDASQRGRLIEEEVGL 557
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EGLA DWIG +YW D + IE D NG ++ K+ I+QPRG + P + LFW
Sbjct: 558 PEGLAVDWIGHKLYWTDRGKSLIEGSDLNGKYCEIIIKEGISQPRGNAVHPM--AKRLFW 615
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
TD G NPRIE + GS R I S+ + WP+G+ +D T ++Y+ D+K I+ +L+
Sbjct: 616 TDMGINPRIESSSLQGSGRLVIASSDLVWPSGIAVDYLTDKLYWCDAKQSVIEMSNLD 673
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 181/426 (42%), Gaps = 54/426 (12%)
Query: 19 PNGADEGPGCDLAECKHKFGLCSNT-CHPTPLGALCTCPPGEILSNDSVTCQDMNEC--E 75
P + D CK K G CS + C P +CTC G LS D C+D++EC
Sbjct: 304 PKAEGDAWASDQKLCKLKKGNCSGSMCEQEPKSQVCTCAEGYTLSQDGKNCEDVSECAFR 363
Query: 76 QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD----- 130
GY + C N GSY C+C EGYVL D C + + + ++ +L +D
Sbjct: 364 NHGY-TDDCENIPGSYYCTCPEGYVLLPDGKWCHQLISCPSNMSECSQDCVLTSDGPICS 422
Query: 131 ------LEEKGK--------DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
L+ GK D+ + + L V W G + D +L++ + C
Sbjct: 423 CPEGSVLDTDGKICSGCSSPDNGGCSQLCTPLSPVS-----WKCGCLPGYDLQLDK-KSC 476
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 236
+G +L N R M D TD+G + IGM + + K
Sbjct: 477 RPSGPPPFLLFA-NSQDIRYMHFD---------GTDYGTLVHQQIIGMVFTLDHDPVENK 526
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI 296
IY+ + + L R A + I+ + + + + I KLYW D G + I
Sbjct: 527 IYFAHTV-LKWIERANMDASQRGRLIE-EEVGLPEGLAVDWIGHKLYWTDRGKS----LI 580
Query: 297 GKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG 356
++++G I++ E ++ N + + + LFWTD G NPRIE + G
Sbjct: 581 EGSDLNGKYCEIIIK----EGISQPRGNAVHPMA-----KRLFWTDMGINPRIESSSLQG 631
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
S R I S+ + WP+G+ +D T ++Y+ D+K I+ N DG+ +++ D+ F
Sbjct: 632 SGRLVIASSDLVWPSGIAVDYLTDKLYWCDAKQSVIEMSNLDGSKCRRLPQKDVGHSFAV 691
Query: 417 DLMGDN 422
+ D+
Sbjct: 692 AVFEDH 697
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 100/256 (39%), Gaps = 33/256 (12%)
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEG 153
+C EG N TC + FLI S+ +SI DLE + D +G+ ++
Sbjct: 27 NCPEGSPSGNGNSTCAGL---VPFLIFSHGNSICRIDLEGTNYEQLVAD---AGISVIMD 80
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW----LF 209
Y+ IYW+D ++ NG R A D GM ++ W L
Sbjct: 81 FHYN--EERIYWVDLERQLLQRVHLNG-RRQEKAYDIDKNVSGMAIN------WINEELI 131
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS---KLDFIDCKS 266
W++ E I + N S ++ + + +P + +D R ++++ L D
Sbjct: 132 WSNQQEG--IITVTDRKGNNSWVLLSALKYPANIAVDPVARFMFWSSEVAGSLHRADLGG 189
Query: 267 LEIK---------TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
+E+K T V+ + ++L+WI G +I + DG + +
Sbjct: 190 MEVKLLLETSETITAVSLDMLDKRLFWIQYHRGGGDPRICSCDYDGGSVLFSKYSLRHNL 249
Query: 318 LALDLENGMLYYSTLK 333
LA ++YST K
Sbjct: 250 LAASFFGDCIFYSTWK 265
>gi|334331211|ref|XP_003341467.1| PREDICTED: pro-epidermal growth factor-like [Monodelphis domestica]
Length = 1094
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 135/295 (45%), Gaps = 48/295 (16%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C +L C CS+ C T G C CP G +L D TC +
Sbjct: 386 CPKGFVLLSDGKRCHELVSCVSNNTGCSHGCVMTSDGPTCFCPEGSVLEKDGKTCIGCSS 445
Query: 74 CEQPGYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI------ 126
+ G CSQ+CT + S+ C C GY L+ D CKA FL+ +N H I
Sbjct: 446 LDNGG-CSQICTPLSPVSWECGCFPGYELQQDQKRCKATG-PQPFLLFANMHDIRRIHFD 503
Query: 127 ---------------LVAD-----------------LEEKGKD-HRAQDIVVSGLDLVEG 153
L D +E D + + ++ +D E
Sbjct: 504 GTSYESLLSRQMGVVLALDHDPVENKIYFAHTTLKWIERANMDGSKRERLIQEAIDTPES 563
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
LA DWI +YW D + I + NG + V+ +++++QPRG+ + P + LFWTD
Sbjct: 564 LAVDWIDRKLYWTDRGKSLIARSNLNGKHNEVIIEEDVSQPRGIAVHPV--AKKLFWTDL 621
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
G NPRIE + G++R I +T + WP+G+T+D ++Y+ D+K I+ +L+
Sbjct: 622 GINPRIESSSLQGNDRLIIANTDLVWPSGITIDYVADKLYWCDAKQSVIETANLD 676
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 175/441 (39%), Gaps = 85/441 (19%)
Query: 19 PNGADEGPGCDLAECKHKFGLCS-NTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQP 77
P ++ + A C K C + C P C C G LS D C+D+NEC
Sbjct: 308 PTARNDTQVSEQASCNFKKDSCRISVCGQDPKSHGCKCAEGYTLSQDGRYCEDVNECAFW 367
Query: 78 GY-CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD------ 130
+ C+ C N GSY C+C +G+VL D C + + + ++ +D
Sbjct: 368 NHGCTLGCENVPGSYYCTCPKGFVLLSDGKRCHELVSCVSNNTGCSHGCVMTSDGPTCFC 427
Query: 131 -----LEEKGK--------DHRAQDIVVSGLDLVE---------GLAYDW-----IGGHI 163
LE+ GK D+ + + L V L D G
Sbjct: 428 PEGSVLEKDGKTCIGCSSLDNGGCSQICTPLSPVSWECGCFPGYELQQDQKRCKATGPQP 487
Query: 164 YWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT--DWGENPRIER 221
+ L + ++ I +GT+ L + + DP + T W IER
Sbjct: 488 FLLFANMHDIRRIHFDGTSYESLLSRQMGVVLALDHDPVENKIYFAHTTLKW-----IER 542
Query: 222 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRK 281
MDGS R +I I P L +D+ID RK
Sbjct: 543 ANMDGSKRERLIQEAIDTPESLA--------------VDWID----------------RK 572
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
LYW D G + I ++N++G + +++ + + + + + LFWT
Sbjct: 573 LYWTDRGKS----LIARSNLNGKHNEVIIEEDVSQPRGIAVH---------PVAKKLFWT 619
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D G NPRIE + G++R I +T + WP+G+T+D ++Y+ D+K I+ N DG+G
Sbjct: 620 DLGINPRIESSSLQGNDRLIIANTDLVWPSGITIDYVADKLYWCDAKQSVIETANLDGSG 679
Query: 402 RQQVILIDLMVEFTNDLMGDN 422
R+++ D+ F + D+
Sbjct: 680 RRRLFQNDVDHPFGVAVFEDH 700
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 78/190 (41%), Gaps = 34/190 (17%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++I+ + V G+A +WI I W + IE D G N VL K+ + P+ +++D
Sbjct: 111 KEILCNAEKGVSGMAINWIHEEIIWSNQLKGTIEATDMKGNNSHVLLKE-LNHPKNIIVD 169
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P R++FW I R ++G++ KI T+ + + LD
Sbjct: 170 PV--KRFIFWVADNITGTINRANLNGTD------MKILLKRSQTIKMIS---------LD 212
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
ID +KL+WI + G L +G N DG + +L + +
Sbjct: 213 VID----------------QKLFWIQDSGEESDLHVGSCNYDGGSVQLLSHFTKHHYFGM 256
Query: 321 DLENGMLYYS 330
L ++YS
Sbjct: 257 SLFVEDMFYS 266
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 29 DLAECKHKFGLC---SNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQ-- 82
D+ EC+ LC S+ C T G +C C G S D + C D++ECE + C +
Sbjct: 826 DIDECEMDDVLCQPESSQCINTEGGYVCKCLEG--YSGDGLDCSDIDECEMGVHTCGENA 883
Query: 83 MCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHS 125
+C NT+G YIC C++G AF +I NR+S
Sbjct: 884 ICKNTEGGYICICSDGTAGPGSVCPESVPPRDDAFSLIRNRNS 926
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 143 IVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++++ DLV G+ D++ +YW D++ + IE + +G+ R L ++++ P G+ +
Sbjct: 638 LIIANTDLVWPSGITIDYVADKLYWCDAKQSVIETANLDGSGRRRLFQNDVDHPFGVAV- 696
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNR 229
++++DW + I G NR
Sbjct: 697 ---FEDHVWFSDWAKPSLIRVDKRTGQNR 722
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 10/55 (18%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNECE------QPGYCSQMCTNTKGSYICSCNEGY 99
A C C G S + C D++ECE QP S C NT+G Y+C C EGY
Sbjct: 809 AWCQCLEG--FSRNGTLCSDIDECEMDDVLCQPE--SSQCINTEGGYVCKCLEGY 859
>gi|395750478|ref|XP_002828723.2| PREDICTED: low-density lipoprotein receptor [Pongo abelii]
Length = 986
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 138/309 (44%), Gaps = 60/309 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 443 CITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVA 502
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
C+D++EC+ P CSQ+C N +G Y C C EG+ L+ CKA+ S A+L +NR
Sbjct: 503 QR-RCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG-SIAYLFFTNR 560
Query: 124 HSI------------LVADLE-----------------------------EKGKDHRAQD 142
H + L+ +L ++ + D
Sbjct: 561 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMIYSTQLDRAHGVSSYD 620
Query: 143 IVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
V+S L +GLA DWI +IYW DS L + V D G R L ++N ++PR +++DP
Sbjct: 621 TVISRDLQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDP 680
Query: 202 S---------PGTRW-----LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
PG + L+W D + I I ++G NR T++ + +L I
Sbjct: 681 VHGKHCPCRLPGVLYLPRGRLYWVD-SKLHSISSIDVNGGNRKTVLEDAKRLAHPFSLAI 739
Query: 248 ATRRVYFAD 256
+V++ D
Sbjct: 740 FEDKVFWTD 748
>gi|91081089|ref|XP_975483.1| PREDICTED: similar to GA19223-PA [Tribolium castaneum]
gi|270006015|gb|EFA02463.1| hypothetical protein TcasGA2_TC008151 [Tribolium castaneum]
Length = 1580
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 158/357 (44%), Gaps = 77/357 (21%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C G CS+ C P P G C CP G I D++TC + ++ + +
Sbjct: 302 CARNNGGCSHLCLLSPNPPGFTCACPYG-IKLIDNLTCAKGPQ--------ELLLLARRT 352
Query: 91 YICSCNEGYVLEYDNHTCKAIN-HSAAFLIISNRHSI---LVADLEEKGKDHRAQ----- 141
IC + L+ ++T K + H + I + + + +E K RA+
Sbjct: 353 DICLIH----LDSPDYTNKILPLHDVKYTIAVDYDPVQGYIYWSDDEVKKIQRARLNGSD 408
Query: 142 --DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
D+V+ + +G+A DW+ +IYW D+ +R+EV R V+ D++ +PRG+ +
Sbjct: 409 QSDVVIDEIQHPDGIAVDWVSRNIYWTDAGTDRVEVYRLEKKYRKVIIFDDLMEPRGIAV 468
Query: 200 DPSPGTRWLFWTDW-GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
P G WLFW+DW +NP++ER +DGS+R+ I+ + WPNG+TLD+ R+Y+ D+K
Sbjct: 469 APELG--WLFWSDWYDKNPKVERANLDGSDRTAIVYENLGWPNGITLDLNKGRLYWCDAK 526
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D +I ANMDG + +L+S L
Sbjct: 527 TD----------------------------------RIEHANMDGGDRRVLISNDLPHVF 552
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
L LY WTDW + IER D R +I +I PN + L
Sbjct: 553 GFTLMGDFLY-----------WTDW-QRRSIERAHKDTGGRREVILDQI--PNVMGL 595
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 90/158 (56%), Gaps = 15/158 (9%)
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++V + L GLA DW +YWLDS RIEV G +R VL +I QPR + L P
Sbjct: 101 EVVSTDLLSPVGLACDWFTSKLYWLDSETKRIEVATMEGLHRKVLFWTDIDQPRAIALAP 160
Query: 202 SPGTRWLFWTDWGENPRIERIGMDG--SNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +FWTDWGE P+IER GM+G + R I++T I WPNGLT+D T +++ D L
Sbjct: 161 MKGL--MFWTDWGEVPKIERAGMNGDPATRRVIVNTTIIWPNGLTIDYETETIFWIDGSL 218
Query: 260 DFIDCKSLE-------IKTNVNYS---TIFR-KLYWID 286
F++ + E +K+ Y T+F+ K+YW D
Sbjct: 219 QFLESMTFEGTNRTTVLKSGFQYPFALTMFQTKIYWTD 256
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 116/226 (51%), Gaps = 45/226 (19%)
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
+ +D P +++W+D E +I+R ++GS++S ++ +I P+G+ +D +R +Y+ D
Sbjct: 378 IAVDYDPVQGYIYWSD-DEVKKIQRARLNGSDQSDVVIDEIQHPDGIAVDWVSRNIYWTD 436
Query: 257 SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE 316
+ D ++ LE K +RK+ D+ L+ +
Sbjct: 437 AGTDRVEVYRLEKK--------YRKVIIFDD---------------------LMEPR--- 464
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDW-GENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
+A+ E G WLFW+DW +NP++ER +DGS+R+ I+ + WPNG+TL
Sbjct: 465 GIAVAPELG-----------WLFWSDWYDKNPKVERANLDGSDRTAIVYENLGWPNGITL 513
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
D+ R+Y+ D+K D I+ N DG R+ +I DL F LMGD
Sbjct: 514 DLNKGRLYWCDAKTDRIEHANMDGGDRRVLISNDLPHVFGFTLMGD 559
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 137/326 (42%), Gaps = 93/326 (28%)
Query: 78 GYCSQMCTNTKG-SYICSCNEGYVLEYDNHTCK--------------------------- 109
G CSQ C + +C+C GY L D TC
Sbjct: 614 GGCSQFCFYYHNKTKVCACELGYELASDRRTCTKPKIFLLYSKKNQIGMIGIENRDNEVA 673
Query: 110 ----AINHSAAFLIISNRHSILVADLEEK--------GKDHRAQDIVVSGLDLVEGLAYD 157
+NH+++ +N I +DL + G D + +V GL EG+A D
Sbjct: 674 IPLTGVNHASSVAYDTNTMRIYWSDLTSRTIMRSFFNGSD--TEKVVDLGLTSPEGIAID 731
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
W+G +IYW DS +RIEV G++ R +L + + P +++DP G +L+W++WG +
Sbjct: 732 WLGLNIYWTDSFAHRIEVARLQGSSRRTLLWEGKVYDPHSIVVDPPNG--YLYWSEWGTS 789
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
I++ MDGS S + TK Y + LTLD +RR+Y+ LE K+ +
Sbjct: 790 KSIKKSAMDGSGVSPLRVTKEYAAD-LTLDYDSRRLYW------------LETKSAM--- 833
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
I ++DG++ I+V +Y + L L +Y
Sbjct: 834 -------------------ILSVDLDGNDEKIIVKDNIYMPVGLTLYKDFIY-------- 866
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
W++ E + +I DGSNR +
Sbjct: 867 ---WSNSDEIMKASKI--DGSNRQVL 887
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 108/255 (42%), Gaps = 61/255 (23%)
Query: 172 RIEVCDENGTNRIV--LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI------G 223
RI N N+I L N T+ G +D + WTD G +E I G
Sbjct: 40 RIANTTRNSNNKITTSLLVKNFTE--GPAIDYHYEEEKICWTDHG----LESILCAHFNG 93
Query: 224 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRK-L 282
+ N+ ++ST + P GL D T ++Y+ DS+ I+ ++E + RK L
Sbjct: 94 TEVKNKVEVVSTDLLSPVGLACDWFTSKLYWLDSETKRIEVATME--------GLHRKVL 145
Query: 283 YWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD 342
+W D P I A M G +FWTD
Sbjct: 146 FWTDIDQ---PRAIALAPMKG---------------------------------LMFWTD 169
Query: 343 WGENPRIERIGMDG--SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
WGE P+IER GM+G + R I++T I WPNGLT+D T +++ D L F++ ++GT
Sbjct: 170 WGEVPKIERAGMNGDPATRRVIVNTTIIWPNGLTIDYETETIFWIDGSLQFLESMTFEGT 229
Query: 401 GRQQVILIDLMVEFT 415
R V+ F
Sbjct: 230 NRTTVLKSGFQYPFA 244
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 103/247 (41%), Gaps = 51/247 (20%)
Query: 163 IYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIER 221
I+ L S+ N+I + EN N + + + + D + T ++W+D I R
Sbjct: 650 IFLLYSKKNQIGMIGIENRDNEVAIPLTGVNHASSVAYDTN--TMRIYWSDLTSR-TIMR 706
Query: 222 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRK 281
+GS+ ++ + P G+ +D +Y+ DS I+ L+
Sbjct: 707 SFFNGSDTEKVVDLGLTSPEGIAIDWLGLNIYWTDSFAHRIEVARLQ------------- 753
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLF 339
S ++L G++Y+ ++ +D NG LY
Sbjct: 754 --------------------GSSRRTLLWEGKVYDPHSIVVDPPNGYLY----------- 782
Query: 340 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
W++WG + I++ MDGS S + TK Y + LTLD +RR+Y+ ++K I + DG
Sbjct: 783 WSEWGTSKSIKKSAMDGSGVSPLRVTKEYAAD-LTLDYDSRRLYWLETKSAMILSVDLDG 841
Query: 400 TGRQQVI 406
+ ++
Sbjct: 842 NDEKIIV 848
>gi|427780089|gb|JAA55496.1| Putative low density lipoprotein receptor-related protein 6
[Rhipicephalus pulchellus]
Length = 973
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 150/359 (41%), Gaps = 89/359 (24%)
Query: 26 PGCDLAECKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNE---------- 73
P + ++C + G CS+ C + C CP G L NDS TC E
Sbjct: 289 PKGEGSQCSYNNGGCSHLCLVSSEAPFYSCACPTGVRLLNDSRTCAQGAEQILLLARRKD 348
Query: 74 -----CEQPGYCSQMCTNTKGSYICSCN----EGYVLEYDNHTCKAINHSAAFLIISNRH 124
+ P Y + + + + EG V D+ C AFL + +
Sbjct: 349 LRRISLDTPDYTDVVLPLRGLKHAIALDYDPVEGRVYWTDDELCLI---QRAFLNGTGQE 405
Query: 125 SILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
+++ +++ +GLA D + ++YW D+ +RIEV NGT R
Sbjct: 406 AVVTLEVQHP-----------------DGLAVDVVARNLYWTDTGTDRIEVARLNGTARK 448
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
VL + + +PR ++LDP G W++WTDWG+ +IER +DGS R ++ST + WPNGL
Sbjct: 449 VLIAEGLAEPRAIVLDPPQG--WMYWTDWGQPAKIERAALDGSERRVLVSTDLGWPNGLA 506
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
LD R+Y+AD++ D +I + +DGS
Sbjct: 507 LDARDGRLYWADARTD----------------------------------RIESSRLDGS 532
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+ +L+ QL L ++++WTDW + IER+ R I+
Sbjct: 533 DRKVLLDNQLPHVFGFTL-----------LGQYIYWTDW-QGRSIERLHKRTGERLVIL 579
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 113/226 (50%), Gaps = 51/226 (22%)
Query: 142 DIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
D+ V+ + +V +GLA DW+G +YW DS NR+EV + +G++R VL ++ QPR + L
Sbjct: 93 DLTVASMGVVSPDGLACDWVGRKLYWTDSETNRLEVAELDGSHRKVLLWRDLDQPRAIAL 152
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDG--SNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
P+ G LFWTDWG+ P+IER MDG + R I+ I+WPNGLT+D RR+Y+ D+
Sbjct: 153 VPTDGL--LFWTDWGDVPKIERASMDGNLTTRKVIVREDIFWPNGLTVDYEARRIYWVDA 210
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KL I +++NY DG + ++++ G L
Sbjct: 211 KLKLI--------SSMNY--------------------------DGEDRAVVIHGSLSLP 236
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
AL + LY WTDW + G+ R T++
Sbjct: 237 FALTVLGDTLY-----------WTDWQMRAVLSCSKQTGTQRRTVL 271
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 144/346 (41%), Gaps = 67/346 (19%)
Query: 32 ECKHKFGLCSNTCHPTPLGA-LCTCPPGEILSNDSVTCQDMN------ECEQPGYCSQMC 84
+C G CS+ C P G +C CP G L D C + S
Sbjct: 601 DCSRANGGCSHLCLQRPHGGRVCACPTGLELRADLRGCTVAEAFLLYAQHSDIRRISLQS 660
Query: 85 TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIV 144
T + E L+YD + + A IS R + + LE IV
Sbjct: 661 RRTDQIPLAGVREVAALDYDGNDGRLYWSDKALKRIS-RAFLNGSQLES---------IV 710
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
GL+L E LA DW+G ++YW D L RIEV +G R VL + PR ++L+P
Sbjct: 711 EFGLELPESLAVDWVGRNLYWADLVLKRIEVSRLDGQARRVLLWQRLDVPRALVLEPK-- 768
Query: 205 TRWLFWTDWG-ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
RW+FW+DWG ++PRIER +DGS R ++ ++ N LT+D A +R
Sbjct: 769 HRWMFWSDWGIKDPRIERAALDGSQRKR-LTIEVGRVNSLTIDHAEQR------------ 815
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
LYWID N IG +MDG ++V A A
Sbjct: 816 ------------------LYWIDIDAN----HIGCCDMDGERHRVVVP-----AAAAQRP 848
Query: 324 NGMLYYSTLKCTRWLFWTDWGENPRIER-IGMDGSNRSTIISTKIY 368
G+ Y +L+WTD E IER + G+NRS ++ Y
Sbjct: 849 FGLTQYQ-----EYLYWTDL-EGHSIERALKSTGANRSRLLGQLKY 888
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 132/327 (40%), Gaps = 98/327 (29%)
Query: 100 VLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWI 159
VL Y C A H L+ +NR I + LE G+ ++V GL+ L + +
Sbjct: 13 VLCYWLAVCNATAHGGVRLLFANRKDIRL--LELDGRRANGSRVLVDGLEDAAALDFLYE 70
Query: 160 GGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRI 219
GG LFWTD G I
Sbjct: 71 GGL---------------------------------------------LFWTDVGLEV-I 84
Query: 220 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIF 279
R +DG++ T+ S + P+GL D +
Sbjct: 85 RRRSLDGTD-LTVASMGVVSPDGLACD------------------------------WVG 113
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRW 337
RKLYW D N ++ A +DGS+ +L+ L + A+AL +G+L
Sbjct: 114 RKLYWTDSETN----RLEVAELDGSHRKVLLWRDLDQPRAIALVPTDGLL---------- 159
Query: 338 LFWTDWGENPRIERIGMDG--SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
FWTDWG+ P+IER MDG + R I+ I+WPNGLT+D RR+Y+ D+KL I
Sbjct: 160 -FWTDWGDVPKIERASMDGNLTTRKVIVREDIFWPNGLTVDYEARRIYWVDAKLKLISSM 218
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGDN 422
NYDG R VI L + F ++GD
Sbjct: 219 NYDGEDRAVVIHGSLSLPFALTVLGDT 245
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 120/253 (47%), Gaps = 51/253 (20%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ +VL + + DP G ++WTD E I+R ++G+ +
Sbjct: 349 LRRISLDTPDYTD-VVLPLRGLKHAIALDYDPVEGR--VYWTD-DELCLIQRAFLNGTGQ 404
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ ++ P+GL +D+ + R LYW D G
Sbjct: 405 EAVVTLEVQHPDGLAVDV------------------------------VARNLYWTDTGT 434
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
+ +I A ++G+ +L++ L E A+ LD G W++WTDWG+
Sbjct: 435 D----RIEVARLNGTARKVLIAEGLAEPRAIVLDPPQG-----------WMYWTDWGQPA 479
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+IER +DGS R ++ST + WPNGL LD R+Y+AD++ D I+ DG+ R+ ++
Sbjct: 480 KIERAALDGSERRVLVSTDLGWPNGLALDARDGRLYWADARTDRIESSRLDGSDRKVLLD 539
Query: 408 IDLMVEFTNDLMG 420
L F L+G
Sbjct: 540 NQLPHVFGFTLLG 552
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 17/172 (9%)
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
++YW + I+ R + S+L+ I LE+ ++ + R LYW D V +
Sbjct: 685 RLYWSDKALKRIS--RAFLNGSQLESIVEFGLELPESLAVDWVGRNLYWADL----VLKR 738
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWG-ENPRIERIGM 354
I + +DG +L+ +L AL LE RW+FW+DWG ++PRIER +
Sbjct: 739 IEVSRLDGQARRVLLWQRLDVPRALVLEPKH---------RWMFWSDWGIKDPRIERAAL 789
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
DGS R + + ++ N LT+D A +R+Y+ D + I C+ DG + V+
Sbjct: 790 DGSQRKRL-TIEVGRVNSLTIDHAEQRLYWIDIDANHIGCCDMDGERHRVVV 840
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 26/146 (17%)
Query: 300 NMDGSNAS---ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG 356
+DG A+ +LV G L +A ALD LY L LFWTD G I R +DG
Sbjct: 43 ELDGRRANGSRVLVDG-LEDAAALDF----LYEGGL-----LFWTDVGLEV-IRRRSLDG 91
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
++ T+ S + P+GL D R++Y+ DS+ + ++ DG+ R+ ++ DL
Sbjct: 92 TD-LTVASMGVVSPDGLACDWVGRKLYWTDSETNRLEVAELDGSHRKVLLWRDL------ 144
Query: 417 DLMGDNGVPALALDLENGMLYYSTEG 442
+ A+AL +G+L+++ G
Sbjct: 145 -----DQPRAIALVPTDGLLFWTDWG 165
>gi|149061872|gb|EDM12295.1| low density lipoprotein receptor-related protein 5 (predicted),
isoform CRA_a [Rattus norvegicus]
Length = 1343
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 180/440 (40%), Gaps = 126/440 (28%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C T + C C G L D TC AFL+ ++R +I LE D
Sbjct: 446 GGCSHLCFFTPHATKCGCPIGLELLSDMKTCII---PEAFLVFTSRATIHRISLETNNND 502
Query: 138 ----------------------------------------HRAQDIVVSGLDLVEGLAYD 157
+ ++ GLD EG+A D
Sbjct: 503 VAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIEFGLDYPEGMAVD 562
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP 217
W+G ++YW D+ NRIEV +G R VL ++ PR + LDP+ G +++WT+WG P
Sbjct: 563 WMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTKG--YIYWTEWGGKP 620
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN----- 272
RI R MDG+N T++ K+ N LT+D A +R+Y+ D + I+ ++ +
Sbjct: 621 RIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTNMIESSNMLAPSTFLLFS 679
Query: 273 ------------------------------VNYSTIFRKLYWIDEGGNGVPLKIGKANMD 302
+NY + + +YW+D N I +A D
Sbjct: 680 QKFAISRMIPDDQLSPDLILPLHGLRNVKAINYDPLDKFIYWVDGRQN-----IKRAKDD 734
Query: 303 GSNASILVS-------GQLYEALALDLENGMLYYS-----TLKCTR-------------- 336
G+ S+L S + L++D+ + L+++ T+ R
Sbjct: 735 GTQPSMLTSPSQSLSPDRQPHDLSIDIYSRTLFWTCEATNTINVHRLDGDAMGVVLRGDR 794
Query: 337 -------------WLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
++++T+ ++ +IER +DG+ R + +T + P L +D A ++
Sbjct: 795 DRPRAIAVNAERGYMYFTNMQDHAAKIERASLDGTEREVLFTTGLIRPVALVVDNALGKL 854
Query: 383 YFADSKLDFIDFCNYDGTGR 402
++ D+ L I+ C+ G R
Sbjct: 855 FWVDADLKRIESCDLSGANR 874
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 139/330 (42%), Gaps = 89/330 (26%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN---------- 122
E G CS +C + + Y C+C G L+ + TCKA L
Sbjct: 137 EGNGGCSHLCLLSPREPFYSCACPTGVQLQDNGKTCKAGAEEVLLLARRTDLRRISLDTP 196
Query: 123 ------------RHSILV-----------ADLEEKGKDHR------AQDIVVSGLDLVEG 153
RH+I + D E + AQ +V + ++ +G
Sbjct: 197 DFTDIVLQVGDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLVNTEINDPDG 256
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR ++L P G ++WTDW
Sbjct: 257 IAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGL--MYWTDW 314
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
GENP+IE +DG +R +++T + WPNGL LD+ ++Y+ D+K D
Sbjct: 315 GENPKIECANLDGRDRHVLVNTSLGWPNGLALDLQEGKLYWGDAKTD------------- 361
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
KI N+DG+ L+ +L L +Y
Sbjct: 362 ---------------------KIEVINIDGTKRQTLLEDKLPHIFGFTLLGDFIY----- 395
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ ++R II
Sbjct: 396 ------WTDW-QRRSIERVHKVKASRDVII 418
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 59/84 (70%)
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI N
Sbjct: 1 MYWTDWGEAPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANL 60
Query: 398 DGTGRQQVILIDLMVEFTNDLMGD 421
DG+ RQ+V+ L F L GD
Sbjct: 61 DGSFRQKVVEGSLTHPFALTLSGD 84
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 79/177 (44%), Gaps = 46/177 (25%)
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 1 MYWTDWGEAPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIH---- 56
Query: 268 EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGML 327
+AN+DGS +V G L AL L L
Sbjct: 57 ------------------------------RANLDGSFRQKVVEGSLTHPFALTLSGDTL 86
Query: 328 YYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384
Y WTDW G R I+S +Y P + + R+ +F
Sbjct: 87 Y-----------WTDWQTRSIHACNKWTGEKRKEILSA-LYSPMDIQVLSQERQPHF 131
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 141/359 (39%), Gaps = 66/359 (18%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 12 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 71
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 72 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKWTGEKRKEILSA-LYSPMDIQVLSQE 126
Query: 250 RRVYFA----------------DSKLDFIDCK-SLEIKTNVNYSTIFRKLYWIDEGGNGV 292
R+ +F + F C ++ N T +
Sbjct: 127 RQPHFHTPCEEGNGGCSHLCLLSPREPFYSCACPTGVQLQDNGKTCKAGAEEVLLLARRT 186
Query: 293 PLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
L+ + +L G + A+A+D Y L+ +++WTD E I R
Sbjct: 187 DLRRISLDTPDFTDIVLQVGDIRHAIAID-------YDPLE--GYVYWTD-DEVRAIRRA 236
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL-- 410
+DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 237 YLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDE 296
Query: 411 ----MVEFTNDLM-----GDN---------------------GVP-ALALDLENGMLYY 438
++ LM G+N G P LALDL+ G LY+
Sbjct: 297 PRAIVLHPVMGLMYWTDWGENPKIECANLDGRDRHVLVNTSLGWPNGLALDLQEGKLYW 355
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 119/288 (41%), Gaps = 63/288 (21%)
Query: 115 AAFLIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRL 170
+ FL+ S + +I ++ D D + D+++ GL V+ + YD + IYW+D R
Sbjct: 673 STFLLFSQKFAISRMIPD------DQLSPDLILPLHGLRNVKAINYDPLDKFIYWVDGRQ 726
Query: 171 NRIEVCDENGTNRIVLAKDNIT-----QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD 225
N I+ ++GT +L + + QP + +D +R LFWT N I +D
Sbjct: 727 N-IKRAKDDGTQPSMLTSPSQSLSPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLD 782
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
G ++ P + ++ +YF + +
Sbjct: 783 GDAMGVVLRGDRDRPRAIAVNAERGYMYFTNMQ--------------------------- 815
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
D KI +A++DG+ +L + L +AL ++N + LFW D +
Sbjct: 816 DHAA-----KIERASLDGTEREVLFTTGLIRPVALVVDNALGK---------LFWVD-AD 860
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
RIE + G+NR T+ I P GLT + R +Y+ D + I+
Sbjct: 861 LKRIESCDLSGANRLTLEDANIVQPVGLT--VLGRHLYWIDRQQQMIE 906
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N ++ +N A +E D ++++ +GL L
Sbjct: 787 GVVLRGDRDRPRAIAVNAERGYMYFTNMQD-HAAKIERASLDGTEREVLFTTGLIRPVAL 845
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + R L+W D
Sbjct: 846 VVDNALGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPVGLTV----LGRHLYWID-R 900
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T + ++ G+
Sbjct: 901 QQQMIERVEKTTGDKRTRVQGRVTHLTGI 929
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 163 IYWLD-SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIER 221
+YW D RIE +G+ R ++ +I P G+ +D + L+W D + I R
Sbjct: 1 MYWTDWGEAPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLE--EQKLYWAD-AKLSFIHR 57
Query: 222 IGMDGSNRSTIISTKIYWPNGLTL 245
+DGS R ++ + P LTL
Sbjct: 58 ANLDGSFRQKVVEGSLTHPFALTL 81
>gi|339247087|ref|XP_003375177.1| putative Low-density lipoprotein receptor domain class A
[Trichinella spiralis]
gi|316971556|gb|EFV55314.1| putative Low-density lipoprotein receptor domain class A
[Trichinella spiralis]
Length = 749
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 168/422 (39%), Gaps = 101/422 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTC----PPGEI 60
C+ K+CDG DC + +DE C CK + G C N C G C C +
Sbjct: 367 CIPREKMCDGSADCNDKSDEHIYC--GACKTENGGCPNKCREGAFGVECQCGNTWRQASL 424
Query: 61 LSNDSVTCQDMNECE-QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI 119
S++ C ++ CE C C + ++ CSC+EGY LEY+ TCK + L+
Sbjct: 425 FSSED-HCPKVDYCELHTDECDHFCHSNATNFSCSCSEGYDLEYNLRTCKLKHKHLGHLV 483
Query: 120 ISNRH-----------------SILVADLEEKGKD----------HRAQDIVVSGLDLVE 152
S H +IL + K KD ++ + I+ S V
Sbjct: 484 FSIGHQIRSISINSKEYIGADYTILFDEECSKEKDNGRIMALDYNYKKKQILFSRKTSVY 543
Query: 153 GLA------------------YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
LA DW+ +IY+ D L+RI VC+E+G V K ++ +P
Sbjct: 544 SLANNEEKCLFGEFLSFVNVAVDWVTSNIYFADEMLSRIGVCNEDGRYCTVFDKLSLRRP 603
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
RG+ P G +LF DWG N I R+ MDG + + K+ WPN + +D VY+
Sbjct: 604 RGLATHPKYG--YLFLCDWGANASIIRVAMDGQSWQVLHHKKLSWPNSVAVDYVRDMVYW 661
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
D+K I+ ++ +DGS ++ S +
Sbjct: 662 MDAKYKLIE----------------------------------RSRLDGSEREVVASKGV 687
Query: 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
+ + + +G +FW+DW + +GS ++ S + + P G+
Sbjct: 688 HHPFDMVVFDGR-----------VFWSDWTAKSLLWVSIFNGSEEGSVQSVE-FDPYGIA 735
Query: 375 LD 376
++
Sbjct: 736 IN 737
>gi|194757667|ref|XP_001961084.1| GF11183 [Drosophila ananassae]
gi|190622382|gb|EDV37906.1| GF11183 [Drosophila ananassae]
Length = 1674
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 154/358 (43%), Gaps = 67/358 (18%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTC----QDMNECEQPGYCSQMCTN 86
C H G CS+ C G C CP G L + + TC Q+M Q S++ +
Sbjct: 361 CAHNNGNCSHLCLLATNSQGYSCACPTGVKLVSPN-TCANGSQEMLFVVQRTQISKISLD 419
Query: 87 TKGSYICSCNEGYVLEYDNHTCKAINHSAA--FLIISNRHSILVADLEEKGKDHRAQDIV 144
+ I + G V AI++ ++ S+ + + G D V
Sbjct: 420 SPDYTIFPLSVGKV-----KYAIAIDYDPVEEYIYWSDVETFTIRRAHTDGTG--VTDFV 472
Query: 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
S + +GLA DW+ ++YW D+ +RIEVC +G+ R VL +++ +PR + + PS G
Sbjct: 473 TSEVRHPDGLALDWLARNLYWTDTSTDRIEVCRLDGSARKVLIYEHLEEPRAIAVAPSLG 532
Query: 205 TRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
W+FW+DW E P++ER +DGS R ++S + WPNG+ LDI + +Y+ D K D
Sbjct: 533 --WMFWSDWNERKPKVERASLDGSERVVLVSENLGWPNGIALDIEAKAIYWCDGKTD--- 587
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
KI ANMDGS +++S L L +
Sbjct: 588 -------------------------------KIEVANMDGSGRRVVISENLKHLFGLSIL 616
Query: 324 NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 381
+ LY WTDW + G+NR ++ +P+ + L + R
Sbjct: 617 DDYLY-----------WTDWQRRSIDRAHKITGNNRIVVVDQ---YPDLMGLKVTRLR 660
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 87/158 (55%), Gaps = 14/158 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q ++ +GLD EGLA DW IYW D NRIEV +G + VL ++ QPR + +
Sbjct: 162 QTVISTGLDKPEGLAIDWFTDKIYWTDGEKNRIEVATLDGRYQKVLFWTDLDQPRAVAV- 220
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGS--NRSTIISTKIYWPNGLTLDIATRRVYFADSK 258
P R L WTDWGE P+IER MDG +R T++ ++WPNGL +D+ +Y+ D K
Sbjct: 221 -VPARRLLIWTDWGEYPKIERASMDGDPLSRMTLVKDNVFWPNGLAVDLKNELIYWTDGK 279
Query: 259 LDFIDCKSLE------IKTNVNYS---TIF-RKLYWID 286
FID L+ I N+ Y T F +LYW D
Sbjct: 280 HHFIDVMRLDGGNRRTIVNNLKYPFSVTFFDNRLYWTD 317
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 45/227 (19%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D P +++W+D E I R DG+ + +++++ P+GL LD R +Y+
Sbjct: 436 AIAIDYDPVEEYIYWSD-VETFTIRRAHTDGTGVTDFVTSEVRHPDGLALDWLARNLYWT 494
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ D I+ +DGS +L+ L
Sbjct: 495 DTSTDRIEV----------------------------------CRLDGSARKVLIYEHLE 520
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLT 374
E A+ + + W+FW+DW E P++ER +DGS R ++S + WPNG+
Sbjct: 521 EPRAIAVAPSL---------GWMFWSDWNERKPKVERASLDGSERVVLVSENLGWPNGIA 571
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
LDI + +Y+ D K D I+ N DG+GR+ VI +L F ++ D
Sbjct: 572 LDIEAKAIYWCDGKTDKIEVANMDGSGRRVVISENLKHLFGLSILDD 618
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 129/335 (38%), Gaps = 96/335 (28%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C N Y+C C Y L D TC AAFL+ S + I +E +
Sbjct: 673 GGCSHLCLNRPRDYVCRCAIDYELANDKRTCVV---PAAFLLFSRQEHIGRISIEYNEGN 729
Query: 138 HR-------------------------------------------AQDIVVSGLDLVEGL 154
H Q IV SGL +G+
Sbjct: 730 HNDERIPFKDVRDAHALDVSVAERRIYWTDQKSKCIFRAFLNGSYVQRIVDSGLIGPDGI 789
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
A DW+G +IYW D+ +RIEV +G++R VL + +PR ++L+P G +++WT+
Sbjct: 790 AVDWLGNNIYWSDAEAHRIEVARLDGSSRKVLLWKLVEEPRSLVLEPKRG--YMYWTE-S 846
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274
I R MDGS+ TI++ + GLT D TRR+Y+A
Sbjct: 847 PTDSIRRAAMDGSDLQTIVTGANH-AAGLTFDQETRRLYWATQSR--------------- 890
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKC 334
P KI A+ DG +LV E A+ L +Y
Sbjct: 891 ------------------PAKIECADWDGKRRQVLVGSDTDEPYAVSLYQDYVY------ 926
Query: 335 TRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIY 368
W+DW IER+ G NRS + S Y
Sbjct: 927 -----WSDWNTG-DIERVHKTTGQNRSLVHSGMTY 955
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 121/301 (40%), Gaps = 88/301 (29%)
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGH--IYWLD 167
A ++ A L+ + RH I VA++ + D++V DL E +A D+ + W D
Sbjct: 81 AFVNTPATLLFTTRHDIQVANITRPTGGPQI-DVIVR--DLAEAMAIDFYYAKNLVCWTD 137
Query: 168 SRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227
IE N ++ + L++ +
Sbjct: 138 CGREIIECAHTNASSLLPLSR--------------------------------------A 159
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDE 287
+ T+IST + P GL +D T ++Y+ D + + I+ +L+ + + L+W D
Sbjct: 160 PKQTVISTGLDKPEGLAIDWFTDKIYWTDGEKNRIEVATLDGRYQ-------KVLFWTD- 211
Query: 288 GGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
+D A +V + R L WTDWGE P
Sbjct: 212 -------------LDQPRAVAVVPAR----------------------RLLIWTDWGEYP 236
Query: 348 RIERIGMDGS--NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+IER MDG +R T++ ++WPNGL +D+ +Y+ D K FID DG R+ +
Sbjct: 237 KIERASMDGDPLSRMTLVKDNVFWPNGLAVDLKNELIYWTDGKHHFIDVMRLDGGNRRTI 296
Query: 406 I 406
+
Sbjct: 297 V 297
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 122/302 (40%), Gaps = 64/302 (21%)
Query: 71 MNECE-QPGYCSQMCTNTKGS--YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL 127
+N C+ G CS +C G C+C Y L D +C + ++I S R+S
Sbjct: 970 VNPCKVNNGGCSHLCLAQPGRRGMTCACPTHYQLAKDGVSCIPPKN---YIIFSQRNSF- 1025
Query: 128 VADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
L D + VSG + + + YD I HIYW++ R + I+ NGT LA
Sbjct: 1026 -GRLLPNTTDCPNIPLPVSGKN-IRAVDYDPITHHIYWIEGRSHSIKRSLVNGTKVSQLA 1083
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 247
N QP + +D R LFWT SN + S
Sbjct: 1084 --NSGQPFDLAIDII--GRLLFWT------------CSYSNSINVTS------------- 1114
Query: 248 ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307
F + ID E N+ + R L+W D G + I +A +DG N
Sbjct: 1115 ------FLGESVGVIDTGDSEKPRNIAVHAMKRLLFWTDVGSHQA---IIRARVDG-NER 1164
Query: 308 ILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
+ ++ +L ALALD ++ M+YY+ K RI+ I ++G N+ T++S
Sbjct: 1165 MELAYKLEGVTALALDQQSDMIYYAHGK--------------RIDVIDINGKNKKTLVSM 1210
Query: 366 KI 367
I
Sbjct: 1211 HI 1212
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 111/276 (40%), Gaps = 39/276 (14%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
CK G CS+ C P G C CP L+ D V+C Y N+ G
Sbjct: 973 CKVNNGGCSHLCLAQPGRRGMTCACPTHYQLAKDGVSC-----IPPKNYIIFSQRNSFGR 1027
Query: 91 YICSCNE--GYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGL 148
+ + + L +A+++ H I + G+ H + +V+G
Sbjct: 1028 LLPNTTDCPNIPLPVSGKNIRAVDYDPI------THHIYWIE----GRSHSIKRSLVNGT 1077
Query: 149 DLVE--------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ + LA D IG ++W S N I V G + V+ + +PR + +
Sbjct: 1078 KVSQLANSGQPFDLAIDIIGRLLFWTCSYSNSINVTSFLGESVGVIDTGDSEKPRNIAVH 1137
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK-L 259
R LFWTD G + I R +DG+ R ++ K+ L LD + +Y+A K +
Sbjct: 1138 AM--KRLLFWTDVGSHQAIIRARVDGNERME-LAYKLEGVTALALDQQSDMIYYAHGKRI 1194
Query: 260 DFIDCK--------SLEIKTNVNYSTIFRKLYWIDE 287
D ID S+ I +N + + +YW+D+
Sbjct: 1195 DVIDINGKNKKTLVSMHISQVINIAALGGFVYWLDD 1230
>gi|328702596|ref|XP_003241945.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Acyrthosiphon pisum]
Length = 870
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 168/375 (44%), Gaps = 84/375 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLA-EC-KHKFGLCSNTCHPTPLGA--LCTCPPGEI 60
C+N +K+C+ + DC + +DE GC + C + G C + C G C C G
Sbjct: 350 CINKSKLCNLQYDCEDLSDE-KGCHYSGTCLESTKGGCEHYCLNVTSGKGFSCACYAGYE 408
Query: 61 LSNDSVTCQDMNECEQP-GYCSQMCTNTKGSYICSCNEGYVL-EYDNHTCKAI------- 111
+ +S C+D++EC+ +CSQ CTN GS+ICSC EG+VL + + CKA+
Sbjct: 409 IGENSKKCEDLDECQLGLHHCSQDCTNINGSFICSCREGFVLSDLFSGACKAVDPMLTIV 468
Query: 112 ------------NHSAAFLIISNRHSILVADLEEKG------------------------ 135
N I+SN I D + K
Sbjct: 469 YTNGPELRGYESNKRKHLSILSNEKRIRAIDFDPKSEILYWADSYDQSIKRSYMINAKSG 528
Query: 136 --KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN-------RIEVCDENGTNRIVL 186
K +QD+ + G +A DW+G ++YW + L+ RI V ++G R +
Sbjct: 529 QVKVGYSQDLDIKGSFKPVAVAIDWMGDNLYWAEVDLSKEDKPAGRIMVAKQDGRYRRSI 588
Query: 187 AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 246
+ P ++LDP G +FW D GE P+I+ M+GS + ++++T++++P GLT+D
Sbjct: 589 VSSGLDTPSSLVLDPEMGK--MFWADVGETPKIKMSWMNGSRQISLVTTRLHYPTGLTID 646
Query: 247 IAT-RRVYFADSKLDFIDCKSLEIKTNV------------NYSTIFRKLYWI-------- 285
A +Y+ D+KL+ I+ + K V + +LYW+
Sbjct: 647 TAMDHSLYWVDTKLNVIESIKYDQKNRVVVIRGEHLHHPISLDLFENQLYWLSRETGELI 706
Query: 286 --DEGGNGVPLKIGK 298
D+ G GVP+ I K
Sbjct: 707 KQDKFGRGVPVTIAK 721
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 107/233 (45%), Gaps = 40/233 (17%)
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDC---KSLEIKTNVNYSTIF-----RKLYW- 284
S +YW + + D + +R Y ++K + + L+IK + + LYW
Sbjct: 504 SEILYWAD--SYDQSIKRSYMINAKSGQVKVGYSQDLDIKGSFKPVAVAIDWMGDNLYWA 561
Query: 285 -IDEGGNGVPL-KIGKANMDGSNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFW 340
+D P +I A DG +VS L +L LD E G + FW
Sbjct: 562 EVDLSKEDKPAGRIMVAKQDGRYRRSIVSSGLDTPSSLVLDPEMGKM-----------FW 610
Query: 341 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT-RRVYFADSKLDFIDFCNYDG 399
D GE P+I+ M+GS + ++++T++++P GLT+D A +Y+ D+KL+ I+ YD
Sbjct: 611 ADVGETPKIKMSWMNGSRQISLVTTRLHYPTGLTIDTAMDHSLYWVDTKLNVIESIKYDQ 670
Query: 400 TGRQQVILIDLMVEFTNDLMGDNGVPALALDL-ENGMLYYSTEGAEFLKTPLF 451
R VI G++ ++LDL EN + + S E E +K F
Sbjct: 671 KNRVVVI------------RGEHLHHPISLDLFENQLYWLSRETGELIKQDKF 711
>gi|449500312|ref|XP_002195264.2| PREDICTED: pro-epidermal growth factor [Taeniopygia guttata]
Length = 1253
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 134/297 (45%), Gaps = 52/297 (17%)
Query: 18 CPNG----ADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G D +L C CS+ C T G +C CP G +L D +C
Sbjct: 427 CPRGFVLLPDRKTCHELITCTSNDNGCSHGCLQTSKGPVCFCPEGSVLKVDGKSCTG--- 483
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---- 126
C P G CSQ+C++ + S+ C+C GY L+ D C AI FL+ +N I
Sbjct: 484 CTSPDNGGCSQICSSLSPSSWECACFPGYKLQQDRKHCTAIG-PKPFLLFANGQDIRQIS 542
Query: 127 -----------------LVAD-----------------LEEKGKDHRAQDIVVSG-LDLV 151
L D +E D ++ VV G +D
Sbjct: 543 FDGTDYTSLLDWQMGVVLALDSDPVENKIYFAHTALKWIERANLDGSDREKVVHGAIDTP 602
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EGLA DWI +YW D IE + NG R ++ +N++QPRG+ + P + LFWT
Sbjct: 603 EGLAVDWINRKLYWTDRGKVCIERSNLNGMQRKMIIWENLSQPRGIAIHPF--AKRLFWT 660
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
D G NPRI+ ++G +R + S + WP+G+ LD ++Y+ D+K ++ +L+
Sbjct: 661 DMGVNPRIDSSSLEGFDRRVVASAGLVWPSGIALDYLADKLYWCDAKQAVVESANLD 717
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 172/425 (40%), Gaps = 76/425 (17%)
Query: 28 CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY----CSQM 83
CDL K + +CS P C C G ILS + C+D+NEC G+ C+
Sbjct: 363 CDLNREKCRRRICS----PDSRTHRCKCSSGFILSRNKQFCEDINEC---GFWNHGCTLG 415
Query: 84 CTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDI 143
C N GSY C+C G+VL D TC H ++ + G H
Sbjct: 416 CVNIPGSYYCTCPRGFVLLPDRKTC---------------HELITCTSNDNGCSHGC--- 457
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSR-LNRIEVCDENGTNRIVLAKD------------N 190
L +G G + +D + D G ++I +
Sbjct: 458 ----LQTSKGPVCFCPEGSVLKVDGKSCTGCTSPDNGGCSQICSSLSPSSWECACFPGYK 513
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ Q R P LF I +I DG++ ++++ ++ L D
Sbjct: 514 LQQDRKHCTAIGPKPFLLF----ANGQDIRQISFDGTDYTSLLDWQMGVVLALDSDPVEN 569
Query: 251 RVYFADSKLDFIDCKSLE-----------IKTNVNYST--IFRKLYWIDEGGNGVPLKIG 297
++YFA + L +I+ +L+ I T + I RKLYW D G + I
Sbjct: 570 KIYFAHTALKWIERANLDGSDREKVVHGAIDTPEGLAVDWINRKLYWTDRG----KVCIE 625
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGS 357
++N++G +++ L + + + + LFWTD G NPRI+ ++G
Sbjct: 626 RSNLNGMQRKMIIWENLSQPRGIAIH---------PFAKRLFWTDMGVNPRIDSSSLEGF 676
Query: 358 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+R + S + WP+G+ LD ++Y+ D+K ++ N DG+GR+ + D+ F
Sbjct: 677 DRRVVASAGLVWPSGIALDYLADKLYWCDAKQAVVESANLDGSGRRILAQNDVGHPFAVA 736
Query: 418 LMGDN 422
+ D+
Sbjct: 737 VFEDH 741
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 126/298 (42%), Gaps = 34/298 (11%)
Query: 55 CPPGEILSNDSVTCQDMNECEQPGY--CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN 112
CP G L ++ C D++EC + G C Q C N GSYICSC GY L D +C +N
Sbjct: 28 CPNGYRLKPENSACVDIDECLEGGLGTCGQTCINIPGSYICSCLPGYSLGIDKQSC-YVN 86
Query: 113 HSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNR 172
A FL+ S+ ++I D E + D S L + + +I +YW+DS
Sbjct: 87 DPAPFLLFSHGNAIFRIDTEGTNHERLVSDTGPSTL-----MDFHYIEEKVYWVDSERRL 141
Query: 173 IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW----LFWTDWGENPRIERIGMDGSN 228
++ + NG R L + G +D W + W + + IE M+G
Sbjct: 142 LQRINLNGKKRERLCYID-KGISGFAID------WINQDILWANR-QKGTIEATDMNGKK 193
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFAD------------SKLDFIDC-KSLEIKTNVNY 275
R ++ + P +T+D R ++ + S D I+ K+ E ++
Sbjct: 194 RRVLLRA-VGRPTRITIDAEQRLLFMSSDGTVSSIHRASLSGSDMINILKTTEKIKAISL 252
Query: 276 STIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
+ KLYWI IG + DG L + ++ LA+ L LYYS LK
Sbjct: 253 DLVDTKLYWIQHDHGKEISHIGSCDYDGGGVRFLRNSVRHQLLAMSLFAEHLYYSDLK 310
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 10/73 (13%)
Query: 50 GALCTCPPGEILSNDSVTCQDMNECE-QPGYCSQM---CTNTKGSYICSCNEGY----VL 101
GA+C C G + +C D++EC C++ C NT+G Y+C C EGY V
Sbjct: 906 GAMCQCLKG--FTRKGKSCYDVDECAVHMDRCNRSVADCINTEGGYVCKCLEGYTGDGVH 963
Query: 102 EYDNHTCKAINHS 114
YD CK +H+
Sbjct: 964 CYDIDECKTGSHT 976
>gi|427785327|gb|JAA58115.1| Putative low-density lipoprotein receptor-related protein 6
[Rhipicephalus pulchellus]
Length = 1517
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 113/226 (50%), Gaps = 51/226 (22%)
Query: 142 DIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
D+ V+ + +V +GLA DW+G +YW DS NR+EV + +G++R VL ++ QPR + L
Sbjct: 93 DLTVASMGVVSPDGLACDWVGRKLYWTDSETNRLEVAELDGSHRKVLLWRDLDQPRAIAL 152
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDG--SNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
P+ G LFWTDWG+ P+IER MDG + R I+ I+WPNGLT+D RR+Y+ D+
Sbjct: 153 VPTDGL--LFWTDWGDVPKIERASMDGNLTTRKVIVREDIFWPNGLTVDYEARRIYWVDA 210
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KL I +++NY DG + ++++ G L
Sbjct: 211 KLKLI--------SSMNY--------------------------DGEDRAVVIHGSLSLP 236
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
AL + LY WTDW + G+ R T++
Sbjct: 237 FALTVLGDTLY-----------WTDWQMRAVLSCSKQTGTQRRTVL 271
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 150/359 (41%), Gaps = 89/359 (24%)
Query: 26 PGCDLAECKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNE---------- 73
P + ++C + G CS+ C + C CP G L NDS TC E
Sbjct: 289 PKGEGSQCSYNNGGCSHLCLVSSEAPFYSCACPTGVRLLNDSRTCAQGAEQILLLARRKD 348
Query: 74 -----CEQPGYCSQMCTNTKGSYICSCN----EGYVLEYDNHTCKAINHSAAFLIISNRH 124
+ P Y + + + + EG V D+ C AFL + +
Sbjct: 349 LRRISLDTPDYTDVVLPLRGLKHAIALDYDPVEGRVYWTDDELCLI---QRAFLNGTGQE 405
Query: 125 SILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
+++ +++ +GLA D + ++YW D+ +RIEV NGT R
Sbjct: 406 AVVTLEVQHP-----------------DGLAVDVVARNLYWTDTGTDRIEVARLNGTARK 448
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
VL + + +PR ++LDP G W++WTDWG+ +IER +DGS R ++ST + WPNGL
Sbjct: 449 VLIAEGLAEPRAIVLDPPQG--WMYWTDWGQPAKIERAALDGSERRVLVSTDLGWPNGLA 506
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
LD R+Y+AD++ D +I + +DGS
Sbjct: 507 LDARDGRLYWADARTD----------------------------------RIESSRLDGS 532
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+ +L+ QL L ++++WTDW + IER+ R I+
Sbjct: 533 DRKVLLDNQLPHVFGFTLLG-----------QYIYWTDW-QGRSIERLHKRTGERLVIL 579
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 141/340 (41%), Gaps = 94/340 (27%)
Query: 72 NECEQP-GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL-- 127
N+C + G CS +C G +C+C G L D C + AFL+ + I
Sbjct: 600 NDCSRANGGCSHLCLQRPHGGRVCACPTGLELRADLRGCTV---AEAFLLYAQHSDIRRI 656
Query: 128 -----------------VADLEEKGKDHRA--------------------QDIVVSGLDL 150
VA L+ G D R + IV GL+L
Sbjct: 657 SLQSRRTDQIPLAGVREVAALDYDGNDGRLYWSDKALKRISRAFLNGSQLESIVEFGLEL 716
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
E LA DW+G ++YW D L RIEV +G R VL + PR ++L+P RW+FW
Sbjct: 717 PESLAVDWVGRNLYWADLVLKRIEVSRLDGQARRVLLWQRLDVPRALVLEPK--HRWMFW 774
Query: 211 TDWG-ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEI 269
+DWG ++PRIER +DGS R ++ ++ N LT+D A +R
Sbjct: 775 SDWGIKDPRIERAALDGSQRKR-LTIEVGRVNSLTIDHAEQR------------------ 815
Query: 270 KTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
LYWID N IG +MDG ++V A A G+ Y
Sbjct: 816 ------------LYWIDIDAN----HIGCCDMDGERHRVVVP-----AAAAQRPFGLTQY 854
Query: 330 STLKCTRWLFWTDWGENPRIER-IGMDGSNRSTIISTKIY 368
+L+WTD E IER + G+NRS ++ Y
Sbjct: 855 Q-----EYLYWTDL-EGHSIERALKSTGANRSRLLGQLKY 888
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 132/327 (40%), Gaps = 98/327 (29%)
Query: 100 VLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWI 159
VL Y C A H L+ +NR I + LE G+ ++V GL+ L + +
Sbjct: 13 VLCYWLAVCNATAHGGVRLLFANRKDIRL--LELDGRRANGSRVLVDGLEDAAALDFLYE 70
Query: 160 GGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRI 219
GG LFWTD G I
Sbjct: 71 GG---------------------------------------------LLFWTDVGLEV-I 84
Query: 220 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIF 279
R +DG++ T+ S + P+GL D +
Sbjct: 85 RRRSLDGTD-LTVASMGVVSPDGLACDW------------------------------VG 113
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRW 337
RKLYW D N ++ A +DGS+ +L+ L + A+AL +G+L
Sbjct: 114 RKLYWTDSETN----RLEVAELDGSHRKVLLWRDLDQPRAIALVPTDGLL---------- 159
Query: 338 LFWTDWGENPRIERIGMDG--SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
FWTDWG+ P+IER MDG + R I+ I+WPNGLT+D RR+Y+ D+KL I
Sbjct: 160 -FWTDWGDVPKIERASMDGNLTTRKVIVREDIFWPNGLTVDYEARRIYWVDAKLKLISSM 218
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGDN 422
NYDG R VI L + F ++GD
Sbjct: 219 NYDGEDRAVVIHGSLSLPFALTVLGDT 245
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 120/253 (47%), Gaps = 51/253 (20%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ +VL + + DP G ++WTD E I+R ++G+ +
Sbjct: 349 LRRISLDTPDYTD-VVLPLRGLKHAIALDYDPVEGR--VYWTD-DELCLIQRAFLNGTGQ 404
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ ++ P+GL +D+ + R LYW D G
Sbjct: 405 EAVVTLEVQHPDGLAVDV------------------------------VARNLYWTDTGT 434
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
+ +I A ++G+ +L++ L E A+ LD G W++WTDWG+
Sbjct: 435 D----RIEVARLNGTARKVLIAEGLAEPRAIVLDPPQG-----------WMYWTDWGQPA 479
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+IER +DGS R ++ST + WPNGL LD R+Y+AD++ D I+ DG+ R+ ++
Sbjct: 480 KIERAALDGSERRVLVSTDLGWPNGLALDARDGRLYWADARTDRIESSRLDGSDRKVLLD 539
Query: 408 IDLMVEFTNDLMG 420
L F L+G
Sbjct: 540 NQLPHVFGFTLLG 552
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 17/172 (9%)
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
++YW + I+ R + S+L+ I LE+ ++ + R LYW D V +
Sbjct: 685 RLYWSDKALKRIS--RAFLNGSQLESIVEFGLELPESLAVDWVGRNLYWADL----VLKR 738
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWG-ENPRIERIGM 354
I + +DG +L+ +L AL LE RW+FW+DWG ++PRIER +
Sbjct: 739 IEVSRLDGQARRVLLWQRLDVPRALVLEPKH---------RWMFWSDWGIKDPRIERAAL 789
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
DGS R + + ++ N LT+D A +R+Y+ D + I C+ DG + V+
Sbjct: 790 DGSQRKRL-TIEVGRVNSLTIDHAEQRLYWIDIDANHIGCCDMDGERHRVVV 840
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 95/232 (40%), Gaps = 53/232 (22%)
Query: 78 GYCSQMCTNTKG--SYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G CS +C G + C+C ++L +N TC+ +FL+ S + SI + L
Sbjct: 911 GGCSHLCLGVPGLRGFQCACPTHHLLGPNNRTCQ---RPPSFLLFSQKSSI--SRLGLNA 965
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D + + GL + L +D + +YW+D + + + +NGT +A P
Sbjct: 966 DDSPDIMLPIQGLKNIRALEFDPVADFLYWIDGKSHVVRRSRDNGTQVTTVAASTGAHPF 1025
Query: 196 GMMLDPSPGTRWLFWT------------DWG-----------ENPR-------------- 218
+ LDP R LFW+ D G + PR
Sbjct: 1026 ALALDPY--ARQLFWSCSQGNLINISSLDSGRPLGILLASGDDRPRHLALHPHLGVLVWS 1083
Query: 219 -------IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
IER +DGS R T++S ++ P L +D R+Y++D +L ++
Sbjct: 1084 NLVNPALIERSFVDGSARQTLVSKELRQPGALAMDCPEERLYWSDLELQRVE 1135
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 26/146 (17%)
Query: 300 NMDGSNAS---ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG 356
+DG A+ +LV G L +A ALD LY L LFWTD G I R +DG
Sbjct: 43 ELDGRRANGSRVLVDG-LEDAAALDF----LYEGGL-----LFWTDVGLEV-IRRRSLDG 91
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
++ T+ S + P+GL D R++Y+ DS+ + ++ DG+ R+ ++ DL
Sbjct: 92 TD-LTVASMGVVSPDGLACDWVGRKLYWTDSETNRLEVAELDGSHRKVLLWRDL------ 144
Query: 417 DLMGDNGVPALALDLENGMLYYSTEG 442
+ A+AL +G+L+++ G
Sbjct: 145 -----DQPRAIALVPTDGLLFWTDWG 165
>gi|427798137|gb|JAA64520.1| Putative low density lipoprotein receptor-related protein 6,
partial [Rhipicephalus pulchellus]
Length = 562
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 133/293 (45%), Gaps = 54/293 (18%)
Query: 26 PGCDLAECKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNE---------- 73
P + ++C + G CS+ C + C CP G L NDS TC E
Sbjct: 291 PKGEGSQCSYNNGGCSHLCLVSSEAPFYSCACPTGVRLLNDSRTCAQGAEQILLLARRKD 350
Query: 74 -----CEQPGYCSQMCTNTKGSYICSCN----EGYVLEYDNHTCKAINHSAAFLIISNRH 124
+ P Y + + + + EG V D+ C AFL + +
Sbjct: 351 LRRISLDTPDYTDVVLPLRGLKHAIALDYDPVEGRVYWTDDELCLI---QRAFLNGTGQE 407
Query: 125 SILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
+++ +++ +GLA D + ++YW D+ +RIEV NGT R
Sbjct: 408 AVVTLEVQHP-----------------DGLAVDVVARNLYWTDTGTDRIEVARLNGTARK 450
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
VL + + +PR ++LDP G W++WTDWG+ +IER +DGS R ++ST + WPNGL
Sbjct: 451 VLIAEGLAEPRAIVLDPPQG--WMYWTDWGQPAKIERAALDGSERRVLVSTDLGWPNGLA 508
Query: 245 LDIATRRVYFADSKLDFIDCKSL-----------EIKTNVNYSTIFRKLYWID 286
LD R+Y+AD++ D I+ L ++ ++ + + +YW D
Sbjct: 509 LDARDGRLYWADARTDRIESSRLDGSDRKVLLDNQLPHVFGFTLLGQYIYWTD 561
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 113/226 (50%), Gaps = 51/226 (22%)
Query: 142 DIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
D+ V+ + +V +GLA DW+G +YW DS NR+EV + +G++R VL ++ QPR + L
Sbjct: 95 DLTVASMGVVSPDGLACDWVGRKLYWTDSETNRLEVAELDGSHRKVLLWRDLDQPRAIAL 154
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDG--SNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
P+ G LFWTDWG+ P+IER MDG + R I+ I+WPNGLT+D RR+Y+ D+
Sbjct: 155 VPTDGL--LFWTDWGDVPKIERASMDGNLTTRKVIVREDIFWPNGLTVDYEARRIYWVDA 212
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KL I +++NY DG + ++++ G L
Sbjct: 213 KLKLI--------SSMNY--------------------------DGEDRAVVIHGSLSLP 238
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
AL + LY WTDW + G+ R T++
Sbjct: 239 FALTVLGDTLY-----------WTDWQMRAVLSCSKQTGTQRRTVL 273
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 104/219 (47%), Gaps = 51/219 (23%)
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
LFWTD G I R +DG++ T+ S + P+GL D
Sbjct: 76 LFWTDVGLEV-IRRRSLDGTD-LTVASMGVVSPDGLACDW-------------------- 113
Query: 268 EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENG 325
+ RKLYW D N ++ A +DGS+ +L+ L + A+AL +G
Sbjct: 114 ----------VGRKLYWTDSETN----RLEVAELDGSHRKVLLWRDLDQPRAIALVPTDG 159
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDG--SNRSTIISTKIYWPNGLTLDIATRRVY 383
+L FWTDWG+ P+IER MDG + R I+ I+WPNGLT+D RR+Y
Sbjct: 160 LL-----------FWTDWGDVPKIERASMDGNLTTRKVIVREDIFWPNGLTVDYEARRIY 208
Query: 384 FADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+ D+KL I NYDG R VI L + F ++GD
Sbjct: 209 WVDAKLKLISSMNYDGEDRAVVIHGSLSLPFALTVLGDT 247
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 120/253 (47%), Gaps = 51/253 (20%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ +VL + + DP G ++WTD E I+R ++G+ +
Sbjct: 351 LRRISLDTPDYTD-VVLPLRGLKHAIALDYDPVEGR--VYWTD-DELCLIQRAFLNGTGQ 406
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ ++ P+GL +D+ + R LYW D G
Sbjct: 407 EAVVTLEVQHPDGLAVDV------------------------------VARNLYWTDTGT 436
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
+ +I A ++G+ +L++ L E A+ LD G W++WTDWG+
Sbjct: 437 D----RIEVARLNGTARKVLIAEGLAEPRAIVLDPPQG-----------WMYWTDWGQPA 481
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+IER +DGS R ++ST + WPNGL LD R+Y+AD++ D I+ DG+ R+ ++
Sbjct: 482 KIERAALDGSERRVLVSTDLGWPNGLALDARDGRLYWADARTDRIESSRLDGSDRKVLLD 541
Query: 408 IDLMVEFTNDLMG 420
L F L+G
Sbjct: 542 NQLPHVFGFTLLG 554
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 26/146 (17%)
Query: 300 NMDGSNAS---ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG 356
+DG A+ +LV G L +A ALD LY L LFWTD G I R +DG
Sbjct: 45 ELDGRRANGSRVLVDG-LEDAAALDF----LYEGGL-----LFWTDVGLEV-IRRRSLDG 93
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
++ T+ S + P+GL D R++Y+ DS+ + ++ DG+ R+ ++ DL
Sbjct: 94 TD-LTVASMGVVSPDGLACDWVGRKLYWTDSETNRLEVAELDGSHRKVLLWRDL------ 146
Query: 417 DLMGDNGVPALALDLENGMLYYSTEG 442
+ A+AL +G+L+++ G
Sbjct: 147 -----DQPRAIALVPTDGLLFWTDWG 167
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 129 ADLEEKGKDHRAQDIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
A +E D + ++VS L GLA D G +YW D+R +RIE +G++R VL
Sbjct: 481 AKIERAALDGSERRVLVSTDLGWPNGLALDARDGRLYWADARTDRIESSRLDGSDRKVLL 540
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW 213
+ + G L ++++WTDW
Sbjct: 541 DNQLPHVFGFTL----LGQYIYWTDW 562
>gi|312371454|gb|EFR19638.1| hypothetical protein AND_22080 [Anopheles darlingi]
Length = 536
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 123/249 (49%), Gaps = 21/249 (8%)
Query: 5 CVNLTKVCDGKTDCPNGADE-GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L KVCD K DCP DE C EC G CS C TP C C PG LS
Sbjct: 245 CIPLAKVCDKKPDCPMFQDEPADKCGKNECLENNGGCSQNCIDTPASYYCDCKPGYKLS- 303
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIISN 122
D+ TC D++ECE+PG CSQ CTN+ GS+ C C GY+ + +HT CKA A+ L+ +
Sbjct: 304 DNRTCVDIDECEEPGTCSQNCTNSIGSFKCECMPGYLRDPRDHTRCKATEGHAS-LLFAR 362
Query: 123 RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI-EVCDENGT 181
RH I L DHR +V+ L + + G IYW D RI + + G+
Sbjct: 363 RHDIRKISL-----DHREMTSIVNDTKSATALDFVFRTGMIYWSDVSERRIYKAPIDEGS 417
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRW----LFWTDWGENPRIERIGMDGSNRSTIISTKI 237
++ V+ KD + G+ +D W +++TD ++ IE DG+ +I +
Sbjct: 418 DKTVVVKDQLVTSDGLAVD------WIYNHIYFTDIKKS-TIELTNFDGNMGKVLIKDDL 470
Query: 238 YWPNGLTLD 246
P + LD
Sbjct: 471 EIPRAIALD 479
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 13/107 (12%)
Query: 307 SILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD-GSNRSTIIST 365
SI+ + AL GM+Y W+D E RI + +D GS+++ ++
Sbjct: 378 SIVNDTKSATALDFVFRTGMIY-----------WSDVSER-RIYKAPIDEGSDKTVVVKD 425
Query: 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
++ +GL +D +YF D K I+ N+DG + +I DL +
Sbjct: 426 QLVTSDGLAVDWIYNHIYFTDIKKSTIELTNFDGNMGKVLIKDDLEI 472
>gi|47214294|emb|CAG00960.1| unnamed protein product [Tetraodon nigroviridis]
Length = 671
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 144/324 (44%), Gaps = 58/324 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ ++KVC+ DCP+ +DE C+ EC G CS+ C +G C C PG L
Sbjct: 303 ECIEMSKVCNKVRDCPDWSDEPIKECNFNECLLNNGGCSHICKDMVIGFECDCTPGLQLI 362
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D+NEC PG CSQ+C N KG Y C C+ GY ++ CKA+ LI +N
Sbjct: 363 -DHKTCGDINECLNPGICSQICINLKGGYKCECHNGYQMDPTTGVCKAVGKEPC-LIFTN 420
Query: 123 RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
R I LE K +V + V L D+ I+W D
Sbjct: 421 RRDIRRLGLERK----EYTQLVEQQRNAV-ALDADFNQQMIFWAD--------------- 460
Query: 183 RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIER-IGMDGSNRSTIISTKIYWPN 241
L + I L+W+DWGE +IE GM+G +R ++++ I PN
Sbjct: 461 ---LGQKAIFS-------------VLYWSDWGEPAKIENSAGMNGVDRQVLVASDIQRPN 504
Query: 242 GLTLDIATRRVYFADSKLDFIDC-------------KSLEIKTNVNYSTIFR-KLYWIDE 287
G+TLD+ R+Y+ DSKL + C +S E + T+F +++W D
Sbjct: 505 GITLDLIKGRLYWVDSKLHML-CSVDLNGDNRKKVLQSSEYLAHPLALTVFEDRVFWTDS 563
Query: 288 GGNGVPLKIGKANMDGSNASILVS 311
+ G GS+ + L S
Sbjct: 564 DNQAI---YGANKFSGSDVTTLAS 584
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 317 ALALDLENGMLYYSTL---KCTRWLFWTDWGENPRIER-IGMDGSNRSTIISTKIYWPNG 372
AL D M++++ L L+W+DWGE +IE GM+G +R ++++ I PNG
Sbjct: 446 ALDADFNQQMIFWADLGQKAIFSVLYWSDWGEPAKIENSAGMNGVDRQVLVASDIQRPNG 505
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+TLD+ R+Y+ DSKL + + +G R++V+
Sbjct: 506 ITLDLIKGRLYWVDSKLHMLCSVDLNGDNRKKVL 539
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 18/120 (15%)
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKI-GKANMDGSNASILVSG--QLYEALALDLENGML 327
++ IF LYW D G P KI A M+G + +LV+ Q + LDL G L
Sbjct: 459 ADLGQKAIFSVLYWSDWG---EPAKIENSAGMNGVDRQVLVASDIQRPNGITLDLIKGRL 515
Query: 328 YYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 387
Y W D + + + ++G NR ++ + Y + L L + RV++ DS
Sbjct: 516 Y-----------WVD-SKLHMLCSVDLNGDNRKKVLQSSEYLAHPLALTVFEDRVFWTDS 563
>gi|157124170|ref|XP_001660346.1| low-density lipoprotein receptor (ldl) [Aedes aegypti]
gi|108874065|gb|EAT38290.1| AAEL009806-PA, partial [Aedes aegypti]
Length = 1610
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 51/238 (21%)
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++V + + +GLA DW+ ++YW D+ +RI+VC +G+ R VL +++ +PR + L P
Sbjct: 382 EVVNTEIQSPDGLAVDWLARNLYWTDTGTDRIQVCRLDGSFRRVLIYEHLEEPRAIALAP 441
Query: 202 SPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
+ G W+FW+DW E +P+IER +DG+ R I+ + WPNG+ LD+ R++Y+ D+K+D
Sbjct: 442 TLG--WMFWSDWSEKDPKIERASLDGTERVLIVQQNLGWPNGIALDVEARKIYWCDAKMD 499
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
I+ ANMDGS +I++S L A L
Sbjct: 500 RIEV----------------------------------ANMDGSGRNIILSDNLPHAFGL 525
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 378
L LY WTDW ++G++R+ I+ +P+ + L +A
Sbjct: 526 SLLGDYLY-----------WTDWQRRSIDRANKLNGNDRTVIVEA---FPDLMGLKVA 569
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 94/205 (45%), Gaps = 50/205 (24%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GLD EGLA DW +YW D NRIEV NG + VL ++ QPR + L
Sbjct: 76 VITHGLDKPEGLAIDWYTDKLYWTDGETNRIEVATLNGKFQKVLIWSDLDQPRAIAL--V 133
Query: 203 PGTRWLFWTDWGENPRIERIGMDG--SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P R++ WTDWGE+P+IER MDG +R ++ +I+WPNGL +D+ +Y+ D L
Sbjct: 134 PARRFMIWTDWGESPKIERASMDGDPQSRVVLVHDRIFWPNGLAVDLENELIYWVDGNLH 193
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
F+D N+DGSN LV+ Y
Sbjct: 194 FLDV----------------------------------MNLDGSNRRTLVNNLDYP---- 215
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGE 345
YS +LFWTDW +
Sbjct: 216 --------YSLTFAPNYLFWTDWQD 232
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 111/227 (48%), Gaps = 45/227 (19%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D P +++W+D G N I+++ DG+ +++T+I P+GL +D
Sbjct: 348 AIAIDYDPVDNYIYWSDEGSNA-IKKVRPDGTGMVEVVNTEIQSPDGLAVDW-------- 398
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ R LYW D G + +I +DGS +L+ L
Sbjct: 399 ----------------------LARNLYWTDTGTD----RIQVCRLDGSFRRVLIYEHLE 432
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLT 374
E A+ L + W+FW+DW E +P+IER +DG+ R I+ + WPNG+
Sbjct: 433 EPRAIALAPTL---------GWMFWSDWSEKDPKIERASLDGTERVLIVQQNLGWPNGIA 483
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
LD+ R++Y+ D+K+D I+ N DG+GR ++ +L F L+GD
Sbjct: 484 LDVEARKIYWCDAKMDRIEVANMDGSGRNIILSDNLPHAFGLSLLGD 530
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 142/335 (42%), Gaps = 85/335 (25%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTC----------------------KAINHS- 114
G CSQ+C N Y+C C Y L+ DN TC + NH+
Sbjct: 585 GGCSQLCLNRPRDYVCRCQIDYELDRDNRTCFIPSAFLLFSRHDTGSIGRISIDSHNHTD 644
Query: 115 -AAFLIISNRH--SILVADL------EEKGKDHRA-------QDIVVSGLDLVEGLAYDW 158
A F + + H + +AD +++ RA + IV SGL EG+A DW
Sbjct: 645 YAPFRSVIDAHYLDVDIADRRIYWASQKQKHISRAYINGSNVEKIVESGLIQPEGIAVDW 704
Query: 159 IGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPR 218
+ +IYW D+ RIEV +G++R +L I +PR ++L+P G ++W +W +
Sbjct: 705 LAHNIYWTDAEARRIEVARLDGSSRRILIWKGIEEPRNLILEPRRGL--MYWAEWPSD-S 761
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
I R MDGS TIIS GLTLD TRR+Y+A C+S
Sbjct: 762 IRRAVMDGSELKTIISGA-NLATGLTLDPDTRRLYWA--------CQS------------ 800
Query: 279 FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWL 338
P+ I A DG+ +LV+ D +N + ++ ++
Sbjct: 801 -------------SPIAIESAEWDGTKRKVLVTA--------DSDNPFVPHAVTLYKDYV 839
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
+W+DW IER T++ T + + N L
Sbjct: 840 YWSDWNTG-EIERANKTTGFNRTLVHTNLKYTNSL 873
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 92/181 (50%), Gaps = 25/181 (13%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFW 340
KLYW D N +I A ++G +L+ L + A+ L + R++ W
Sbjct: 95 KLYWTDGETN----RIEVATLNGKFQKVLIWSDLDQPRAIAL---------VPARRFMIW 141
Query: 341 TDWGENPRIERIGMDG--SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
TDWGE+P+IER MDG +R ++ +I+WPNGL +D+ +Y+ D L F+D N D
Sbjct: 142 TDWGESPKIERASMDGDPQSRVVLVHDRIFWPNGLAVDLENELIYWVDGNLHFLDVMNLD 201
Query: 399 GTGRQQVI-LIDLMVEFTNDLMGDNGVPALALDLENGMLYY---STEGAE-FLKTPLFCI 453
G+ R+ ++ +D T N + D ++G L+Y +TE E L +P+ I
Sbjct: 202 GSNRRTLVNNLDYPYSLT---FAPNYL--FWTDWQDGTLHYYNIATEKHEKILDSPVVPI 256
Query: 454 T 454
T
Sbjct: 257 T 257
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 105/270 (38%), Gaps = 62/270 (22%)
Query: 72 NECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
N+C G CS +C + C+C Y L + +C + ++I S R+S
Sbjct: 885 NQCRTNNGGCSHLCLALGQRKMTCACPTHYTLTANRVSCSPPKN---YIIFSQRNSF--G 939
Query: 130 DLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
D + V+G + + + YD + ++YW+D R I +NGT+ V D
Sbjct: 940 RFMPNTTDSPDVPLPVTGKN-IRAVEYDVVTRYVYWIDGRGPIIRRAFDNGTSAKVFI-D 997
Query: 190 NITQPRGMMLDP-------------------------------------------SPGTR 206
+ P M++DP P R
Sbjct: 998 PASSPFDMVIDPIGRLLFWSCSHTNTINITTLDGEIDRIGNVDIGNSEKPRSLALHPTKR 1057
Query: 207 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK-LDFIDCK 265
LFWTD G I R +DG+ R +IS ++ L LD T R+++A K +D +D
Sbjct: 1058 LLFWTDVGTAQSIIRAKLDGTQRKELIS-RLEGITALALDPLTNRLFYAHGKRIDMMDID 1116
Query: 266 SLEIKTNV--------NYSTIFRKLYWIDE 287
EIK V + + + +YW+DE
Sbjct: 1117 GKEIKPLVTEHISLVSSIAALNGYIYWLDE 1146
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 36/205 (17%)
Query: 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN-------------VN 274
N++ +I+ + P GL +D T ++Y+ D + + I+ +L K +
Sbjct: 72 NKTAVITHGLDKPEGLAIDWYTDKLYWTDGETNRIEVATLNGKFQKVLIWSDLDQPRAIA 131
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS--ILVSGQLY--EALALDLENGMLYYS 330
R + W D G + KI +A+MDG S +LV +++ LA+DLEN ++Y
Sbjct: 132 LVPARRFMIWTDWGESP---KIERASMDGDPQSRVVLVHDRIFWPNGLAVDLENELIY-- 186
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 390
W D G ++ + +DGSNR T+++ Y P LT A +++ D +
Sbjct: 187 ---------WVD-GNLHFLDVMNLDGSNRRTLVNNLDY-PYSLTF--APNYLFWTDWQDG 233
Query: 391 FIDFCNYDGTGRQQVILIDLMVEFT 415
+ + N T + + IL +V T
Sbjct: 234 TLHYYNI-ATEKHEKILDSPVVPIT 257
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 30/166 (18%)
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCTRW 337
R++YW + I +A ++GSN +V L E +A+D +Y
Sbjct: 664 RRIYWASQKQK----HISRAYINGSNVEKIVESGLIQPEGIAVDWLAHNIY--------- 710
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
WTD E RIE +DGS+R +I I P L L+ +Y+A+ D I
Sbjct: 711 --WTD-AEARRIEVARLDGSSRRILIWKGIEEPRNLILEPRRGLMYWAEWPSDSIRRAVM 767
Query: 398 DGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGA 443
DG+ + +I G N L LD + LY++ + +
Sbjct: 768 DGSELKTII------------SGANLATGLTLDPDTRRLYWACQSS 801
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 86/222 (38%), Gaps = 24/222 (10%)
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+++ +YW +G I R S FID S ++ I R L+W N
Sbjct: 967 VVTRYVYWIDGRG-PIIRRAFDNGTSAKVFIDPASSPFDMVID--PIGRLLFWSCSHTNT 1023
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
+ + +D + + + +LAL R LFWTD G I R
Sbjct: 1024 INITTLDGEIDRIGNVDIGNSEKPRSLALH-----------PTKRLLFWTDVGTAQSIIR 1072
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
+DG+ R +IS ++ L LD T R+++A K ID + D G++ L+
Sbjct: 1073 AKLDGTQRKELIS-RLEGITALALDPLTNRLFYAHGKR--IDMMDID--GKEIKPLVTEH 1127
Query: 412 VEFTNDLMGDNGVPALALDLENGMLYYSTEG----AEFLKTP 449
+ + + NG LD GM S G E K P
Sbjct: 1128 ISLVSSIAALNGY-IYWLDERPGMERISMIGENRRTEIQKIP 1168
>gi|47211616|emb|CAF92929.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1384
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 111/221 (50%), Gaps = 48/221 (21%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V + L +G+A DW+ ++YW D+ +RIEV NGT+R +L +NI +PR ++LDP
Sbjct: 408 LVTTELKHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSENIDEPRAIVLDPV 467
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWG+ P+IER +DGS+R+ +++T + WPNGL LD +T ++Y+ D+K D
Sbjct: 468 NG--YMYWTDWGKQPKIERANLDGSDRTVLVNTYLGWPNGLALDYSTGKLYWGDAKTD-- 523
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
KI + DG+N L+ L L
Sbjct: 524 --------------------------------KIEVIDADGTNRQTLLDDNLPHLFGFTL 551
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+Y WTDW + IER+ + R TII
Sbjct: 552 LGDFIY-----------WTDW-QMRSIERVHKVTAARETII 580
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 166/380 (43%), Gaps = 88/380 (23%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C + + C+C G L D HTC AFL+ +NR SI L G D
Sbjct: 608 GGCSHLCFWCQRAVRCACPMGMELLPDLHTCVV---PEAFLLFTNRDSIRSISLGTNGND 664
Query: 138 ---------------------------------HRA-------QDIVVSGLDLVEGLAYD 157
+RA + ++ GL+ EG+A D
Sbjct: 665 VAIPLTGVKEASALDFDVSERRIYWTDIQAKTINRAYMNGSAVEHVIEYGLEYPEGMAVD 724
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNRIVLA-KD-----NITQPRGMMLDPSPGTRWLFWT 211
W+G +IYW D+ NRIEV +G R VL KD ++ PR + LDP+ G +++WT
Sbjct: 725 WMGRNIYWADTGTNRIEVARLDGQYRQVLVCKDLDNPRSLDNPRSLALDPASG--YMYWT 782
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
+WG PRI R MDG +T++ NG + ADS++
Sbjct: 783 EWGGRPRIARAYMDGKATTTLVDKSSVTVNGNS--------QAADSQIH----------- 823
Query: 272 NVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS--GQLYEALALDLENGMLYY 329
+++ R +YW E N + ++ M G + +++ A+ + E G +Y+
Sbjct: 824 DLSLDPYSRHIYWTCETTNTINVQ----RMSGQSVGVVLKDDANKPRAIVVSAERGYMYF 879
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
++++ + +IE +DG+ R + +T ++ P L LD ++++ DS L
Sbjct: 880 TSVQ----------ERSAKIEAASLDGTERECLFATGLFRPVALALDNKAGKLFWVDSDL 929
Query: 390 DFIDFCNYDGTGRQQVILID 409
I+ + D TG +++L D
Sbjct: 930 KRIE--SSDLTGANRIVLQD 947
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 94/203 (46%), Gaps = 71/203 (34%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q +VVSGL +GLA DW+G +YW DS NRIEV + +G
Sbjct: 94 QTVVVSGLASPDGLACDWLGKKLYWTDSETNRIEVANLDG-------------------- 133
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
+++WTDWGE PRIE GMDGSNR +++ IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 134 ------YMYWTDWGEEPRIECAGMDGSNRKVLVNQNIYWPNGLTIDLLEQKLYWADAKLS 187
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
FI +AN+DGS +V G L AL
Sbjct: 188 FIH----------------------------------RANLDGSAREAVVEGILTHPFAL 213
Query: 321 DLENGMLYYSTLKCTRWLFWTDW 343
L LY WTDW
Sbjct: 214 TLSGETLY-----------WTDW 225
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 156/348 (44%), Gaps = 71/348 (20%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G CS +C + + Y C+C G L+ D TCK + L+++ R + L+
Sbjct: 274 GNCSHLCLLSPVQPFYSCACPTGVQLKPDGRTCKP--GAEQLLLLARRTDLRKISLDLPD 331
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
DIV+ + HI G ++ ++I
Sbjct: 332 ----FSDIVLQVNTHTHTHTHTHTHTHII-------------RRGYPTLLCQVEDIRHAI 374
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ DP G +++WTD E I R +DG+ + +++T++ P+G+ +D
Sbjct: 375 AIDYDPVEG--YVYWTD-DEIKAIRRAHIDGNASTMLVTTELKHPDGIAVDW-------- 423
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ R LYW D G + +I ++G++ ILVS +
Sbjct: 424 ----------------------VARNLYWTDTGTD----RIEVTRLNGTSRKILVSENID 457
Query: 316 E--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
E A+ LD NG +Y WTDWG+ P+IER +DGS+R+ +++T + WPNGL
Sbjct: 458 EPRAIVLDPVNGYMY-----------WTDWGKQPKIERANLDGSDRTVLVNTYLGWPNGL 506
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
LD +T ++Y+ D+K D I+ + DGT RQ ++ +L F L+GD
Sbjct: 507 ALDYSTGKLYWGDAKTDKIEVIDADGTNRQTLLDDNLPHLFGFTLLGD 554
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 77/129 (59%), Gaps = 9/129 (6%)
Query: 303 GSNASILVSGQLY-EALALDLENGMLYYSTLKCTR--------WLFWTDWGENPRIERIG 353
G+ +++VSG + LA D LY++ + R +++WTDWGE PRIE G
Sbjct: 91 GTGQTVVVSGLASPDGLACDWLGKKLYWTDSETNRIEVANLDGYMYWTDWGEEPRIECAG 150
Query: 354 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
MDGSNR +++ IYWPNGLT+D+ +++Y+AD+KL FI N DG+ R+ V+ L
Sbjct: 151 MDGSNRKVLVNQNIYWPNGLTIDLLEQKLYWADAKLSFIHRANLDGSAREAVVEGILTHP 210
Query: 414 FTNDLMGDN 422
F L G+
Sbjct: 211 FALTLSGET 219
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 140/308 (45%), Gaps = 41/308 (13%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D+ G +YW D++ ++IEV D +GTNR L DN+ G L +++WTD
Sbjct: 505 GLALDYSTGKLYWGDAKTDKIEVIDADGTNRQTLLDDNLPHLFGFTLLGD----FIYWTD 560
Query: 213 WGENPRIERIGMDGSNRSTII----------STKIYWPNGLTLDIA------TRRVYFAD 256
W + IER+ + R TII +T + +G T D A + ++
Sbjct: 561 W-QMRSIERVHKVTAARETIIDQLPDLMGLKATNVTETHG-TNDCAVNNGGCSHLCFWCQ 618
Query: 257 SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE 316
+ +E+ +++ + + + +G +G++ +I ++G + E
Sbjct: 619 RAVRCACPMGMELLPDLHTCVVPEAFLLFTNRDSIRSISLG---TNGNDVAIPLTG-VKE 674
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 376
A ALD + R ++WTD + I R M+GS +I + +P G+ +D
Sbjct: 675 ASALDFDVS---------ERRIYWTDI-QAKTINRAYMNGSAVEHVIEYGLEYPEGMAVD 724
Query: 377 IATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGML 436
R +Y+AD+ + I+ DG RQ ++ DL N DN +LALD +G +
Sbjct: 725 WMGRNIYWADTGTNRIEVARLDGQYRQVLVCKDL----DNPRSLDNPR-SLALDPASGYM 779
Query: 437 YYSTEGAE 444
Y++ G
Sbjct: 780 YWTEWGGR 787
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 65/140 (46%), Gaps = 16/140 (11%)
Query: 98 GYVLEYDNHTCKAINHSAA-----FLIISNRHSILVADLEEKGKDHRAQD-IVVSGLDLV 151
G VL+ D + +AI SA F + R A +E D ++ + +GL
Sbjct: 855 GVVLKDDANKPRAIVVSAERGYMYFTSVQERS----AKIEAASLDGTERECLFATGLFRP 910
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
LA D G ++W+DS L RIE D G NRIVL +I QP G+ + L+W
Sbjct: 911 VALALDNKAGKLFWVDSDLKRIESSDLTGANRIVLQDSSILQPAGLTVLGDH----LYWI 966
Query: 212 DWGEN--PRIERIGMDGSNR 229
D + R++++ DG R
Sbjct: 967 DRQQQMIERVDKLTGDGRTR 986
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 7/105 (6%)
Query: 161 GHIYW--LDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPR 218
G++Y+ + R +IE +GT R L + +P + LD G LFW D + R
Sbjct: 875 GYMYFTSVQERSAKIEAASLDGTERECLFATGLFRPVALALDNKAGK--LFWVD-SDLKR 931
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
IE + G+NR + + I P GLT + +Y+ D + I+
Sbjct: 932 IESSDLTGANRIVLQDSSILQPAGLT--VLGDHLYWIDRQQQMIE 974
>gi|432948492|ref|XP_004084072.1| PREDICTED: low-density lipoprotein receptor-related protein 6-like
[Oryzias latipes]
Length = 1346
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 147/343 (42%), Gaps = 67/343 (19%)
Query: 31 AECKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK 88
+ C G CS+ C P C CP G L D TC+D Q ++ +
Sbjct: 12 SPCSRDNGGCSHLCLLAPSSPFFRCACPTGVQLLEDGRTCRD--GATQMLLLARRTDLRQ 69
Query: 89 GSYICSCNEGYVLEYDNHTCKAINHSAA--------FLIISNRHSILVADLEEKGKDHRA 140
S VL+ ++ I H+ A +L ++ + G D A
Sbjct: 70 ISLDTPDFTDVVLQVED-----IRHAIAIDYDPVEGYLYWTDDDVKAIRRSRLDGSD--A 122
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q IV S + +G+A DWI ++YW D+ +RIEV NGT R +L +++ +PR ++LD
Sbjct: 123 QFIVTSQVSHPDGIAVDWIARNLYWTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLD 182
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWGE P+IER +DG R +++T + WPNGL LD R+Y+ D+K D
Sbjct: 183 PVAG--YMYWTDWGEVPKIERADLDGMERVVMVNTSLGWPNGLALDYHEGRMYWGDAKTD 240
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
KI N++G+ +LV +L
Sbjct: 241 ----------------------------------KIEVMNVNGTGRRVLVENKLPHIFGF 266
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 267 TLLGDHIY-----------WTDW-QRRSIERVHKRTAEREVII 297
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 136/303 (44%), Gaps = 42/303 (13%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
C G CS+ C P G C CP G E+++ DM C P +T
Sbjct: 320 CAESNGGCSHLCLYKPRGVQCGCPIGLELIA-------DMRTCIVPEAFLLFSRHTDIRR 372
Query: 92 ICSCNEGYVLEYDNHTCK----AINHSAA--FLIISNR---HSILVADLEEKGKDHRAQD 142
I LE +N+ + ++A F + NR I + + + A +
Sbjct: 373 IS-------LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALE 425
Query: 143 IVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
VV GLD EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP
Sbjct: 426 HVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDP 485
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
+ G +++WT+WG P+I+R MDG+ R T++ + NGLT+D A RR+Y+ D
Sbjct: 486 AEG--YMYWTEWGGKPKIDRAAMDGTGRITLVG-NVGRANGLTIDYAERRLYWTDLDTTL 542
Query: 262 IDCKSL----------EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
I+ ++ ++ + +YW D I +AN L+
Sbjct: 543 IESSNMLGLDREVIADDLPHPFGLTQYQDYIYWTDWSQR----SIERANKTSGQNRTLIQ 598
Query: 312 GQL 314
G L
Sbjct: 599 GHL 601
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 116/239 (48%), Gaps = 46/239 (19%)
Query: 184 IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+VL ++I + DP G +L+WTD + I R +DGS+ I+++++ P+G+
Sbjct: 80 VVLQVEDIRHAIAIDYDPVEG--YLYWTD-DDVKAIRRSRLDGSDAQFIVTSQVSHPDGI 136
Query: 244 TLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303
+D I R LYW D G + +I ++G
Sbjct: 137 AVDW------------------------------IARNLYWTDTGTD----RIEVTRLNG 162
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+ IL+S L E A+ L+ +++WTDWGE P+IER +DG R ++
Sbjct: 163 TMRKILISEDLDEPRAIVLD---------PVAGYMYWTDWGEVPKIERADLDGMERVVMV 213
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+T + WPNGL LD R+Y+ D+K D I+ N +GTGR+ ++ L F L+GD+
Sbjct: 214 NTSLGWPNGLALDYHEGRMYWGDAKTDKIEVMNVNGTGRRVLVENKLPHIFGFTLLGDH 272
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 145/338 (42%), Gaps = 62/338 (18%)
Query: 78 GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G+CS +C S++C C + L DN TC A +FL+ S + +I ++E+
Sbjct: 626 GHCSHLCLAVPVSSFVCGCPAHFSLNEDNKTCSA---PTSFLLFSQKSAINRMVIDEQ-- 680
Query: 137 DHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
++ DI+ + L V + YD + H+YW+DS+ N I ENG + ++ P
Sbjct: 681 --QSPDIILPIHNLKNVRAIDYDPLDKHLYWIDSKQNLIRRAQENGNQCTTVVSSSLIGP 738
Query: 195 RGMM----LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
++ L +R+++WT+ N I MDGS +++ + P + ++
Sbjct: 739 GQVLQLYDLSIDIFSRFIYWTNEATN-VINVTRMDGSRVGVVLNGEQDRPRAIVVNPERG 797
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
+YF TN+ + KI +A +DG+ +L
Sbjct: 798 YMYF----------------TNLQDRSP----------------KIERAALDGTEREVLF 825
Query: 311 SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 370
G L + +AL ++N + LFW D + RIE + G+NR I + I P
Sbjct: 826 FGGLGKPVALAIDNDVGK---------LFWVD-SDLRRIESSDLSGANRIVIADSNILQP 875
Query: 371 NGLTLDIATRRVYFADSK---LDFIDFCNYDGTGRQQV 405
GLT + +Y+ D + ++ ID DG + Q
Sbjct: 876 VGLT--VFGNHLYWIDKQQQMIERIDKMTRDGRTKVQA 911
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 102/212 (48%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 370 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVE 429
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG + +LV L ALALD
Sbjct: 430 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVAKLDGQHRQVLVWKDLDSPRALALDP 485
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDG+ R T++ + NGLT+D A RR+
Sbjct: 486 AEGYMY-----------WTEWGGKPKIDRAAMDGTGRITLVG-NVGRANGLTIDYAERRL 533
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D I+ N G R +VI DL F
Sbjct: 534 YWTDLDTTLIESSNMLGLDR-EVIADDLPHPF 564
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.139 0.448
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,932,509,902
Number of Sequences: 23463169
Number of extensions: 353142978
Number of successful extensions: 822562
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4849
Number of HSP's successfully gapped in prelim test: 5467
Number of HSP's that attempted gapping in prelim test: 679381
Number of HSP's gapped (non-prelim): 89102
length of query: 461
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 315
effective length of database: 8,933,572,693
effective search space: 2814075398295
effective search space used: 2814075398295
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)