BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17325
(461 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P98158|LRP2_RAT Low-density lipoprotein receptor-related protein 2 OS=Rattus
norvegicus GN=Lrp2 PE=1 SV=1
Length = 4660
Score = 240 bits (613), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 167/301 (55%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+NL+ +CDG DCPNG DE P C+ C H G C++ C P GA C CP G L+ND
Sbjct: 1326 CINLSALCDGVFDCPNGTDESPLCNQDSCSHFNGGCTHQCMQGPFGATCLCPLGYQLAND 1385
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
+ TC+D+NEC+ PG+CSQ C N +GS+ C+C+ Y LE D TCK L++++R
Sbjct: 1386 TKTCEDINECDIPGFCSQHCVNMRGSFRCACDPEYTLESDGRTCKVTGSENPLLVVASRD 1445
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+V ++ + G D R
Sbjct: 1446 KIIVDNITAHTHNLYSLVQDVSFVVALDFDSVTGRVFWSDLLQGKTWSVFQNGTDKRV-- 1503
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ SGL + E +A DWIG ++YW D L IEV +G++R VL N+T+PRG+ LDP
Sbjct: 1504 VHDSGLSVTEMIAVDWIGRNLYWTDYALETIEVSKIDGSHRTVLISKNVTKPRGLALDPR 1563
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +FW+DWG +PRIER MDG+ R+ I+ KIYWP GL++D R +YF D+ LD+I
Sbjct: 1564 MGDNVMFWSDWGHHPRIERASMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYI 1623
Query: 263 D 263
+
Sbjct: 1624 E 1624
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/343 (36%), Positives = 178/343 (51%), Gaps = 63/343 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
RC+++ KVCDG DCP G DE G C + C C CH TP G C CPPG
Sbjct: 277 RCISIDKVCDGVPDCPEGDDENNVTSGRTCGMGVCS--VLNCEYQCHQTPFGGECFCPPG 334
Query: 59 EIL-SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I+ SNDS TC D ++C+ G C Q C N +G + C C EGY+LE H + + SAA
Sbjct: 335 HIINSNDSRTCIDFDDCQIWGICDQKCENRQGRHQCLCEEGYILERGQHCKSSDSFSAAS 394
Query: 118 LIISNRHSILVADLEEKG--------------------KDHRA----------------- 140
+I SN +LV DL + + HR
Sbjct: 395 VIFSNGRDLLVGDLHGRNFRILAESKNRGMVMGVDFHYQKHRVFWTDPMQEKVFSTDING 454
Query: 141 ---QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
Q+I+ +D E LA DWI +Y +++++NRI+V + G R+ L +N+ PRG+
Sbjct: 455 LNTQEILNVSVDTPENLAVDWINNKLYLVETKVNRIDVVNLEGNQRVTLITENLGHPRGI 514
Query: 198 MLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
LDP+ G +LF++DWG P++ER MDGSNR +++TK+ WP G+TLD+ ++RVY+
Sbjct: 515 ALDPTVG--YLFFSDWGSLSGQPKVERAFMDGSNRKDLVTTKVGWPAGITLDLVSKRVYW 572
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
DS+ D+I+ V Y I RK + GG+ VP G
Sbjct: 573 VDSRYDYIE--------TVTYDGIQRKT--VARGGSLVPHPFG 605
Score = 166 bits (419), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 183/411 (44%), Gaps = 98/411 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + +VC+ DC + +DE GC + EC C + C T C+C PG L
Sbjct: 3088 HCIEMGRVCNHVDDCSDNSDEK-GCGINECLDSSISRCDHNCTDTITSFYCSCLPGYKLM 3146
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D +C D++EC E P CSQ C N GSYIC C GY+ E D +C+ ++ +LI S
Sbjct: 3147 SDKRSCVDIDECKESPQLCSQKCENVVGSYICKCAPGYIREPDGKSCRQNSNIEPYLIFS 3206
Query: 122 NRHSI-------------------LVA-------------DLEEK-------GKDHRAQD 142
NR+ I +VA D E++ K +R +
Sbjct: 3207 NRYYIRNLTTDGSSYSLILQGLGNVVALDFDRVEKRLYWIDAEKQIIERMFLNKTNR-ET 3265
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQP 194
I+ L E LA DW+ +YWLD+ L+ + V D G +R ++A+ + P
Sbjct: 3266 IINHRLRRAESLAVDWVSRKLYWLDAILDCLFVSDLEGRHRKMIAQHCVDANNTFCFEHP 3325
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
RG++L P G ++W DWG + I RIGMDG+N+S IISTKI WPN +T+D +Y+
Sbjct: 3326 RGIVLHPQRGH--VYWADWGVHAYIGRIGMDGTNKSVIISTKIEWPNAITIDYTNDLLYW 3383
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
AD+ L +I+ LE G + + G L
Sbjct: 3384 ADAHLGYIEFSDLE----------------------------------GHHRHTVYDGSL 3409
Query: 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
AL ++ T +FWTDW + DGS R +++T
Sbjct: 3410 PHPFAL-----TIFEDT------VFWTDWNTRTVEKGNKYDGSGRVVLVNT 3449
Score = 115 bits (287), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 100/186 (53%), Gaps = 13/186 (6%)
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
++ +++W + L T V+ + + L + + I R LYW D +
Sbjct: 1477 VTGRVFWSD--LLQGKTWSVFQNGTDKRVVHDSGLSVTEMIAVDWIGRNLYWTDYALETI 1534
Query: 293 PLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+ + +DGS+ ++L+S + + L L+ M +FW+DWG +PRIER
Sbjct: 1535 EV----SKIDGSHRTVLISKNVTKPRGLALDPRMG-------DNVMFWSDWGHHPRIERA 1583
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
MDG+ R+ I+ KIYWP GL++D R +YF D+ LD+I+FC+YDG R+QVI DL++
Sbjct: 1584 SMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYIEFCDYDGHNRRQVIASDLVL 1643
Query: 413 EFTNDL 418
+ L
Sbjct: 1644 HHPHAL 1649
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 122/255 (47%), Gaps = 50/255 (19%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+++S + + +G+A+DWI IY+ D I E+G+NR V+A+ +++PR ++LDP
Sbjct: 2461 VLLSNIGVTDGIAFDWINRRIYYSDFSNQTINSMAEDGSNRAVIAR--VSKPRAIVLDPC 2518
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWG N +IER + G+ R I++T + WPNGL LD+ T +Y+AD+ L
Sbjct: 2519 RG--YMYWTDWGTNAKIERATLGGNFRVPIVNTSLVWPNGLALDLETDLLYWADASLQ-- 2574
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
KI ++ + G+N ++VS +
Sbjct: 2575 --------------------------------KIERSTLTGTNREVVVSTAFHSF----- 2597
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G+ Y ++++WTD DGS+ + + P+G++ + T+R
Sbjct: 2598 --GLTVYG-----QYIYWTDLYTRKIYRANKYDGSDLVAMTTRLPTQPSGISTVVKTQRQ 2650
Query: 383 YFADSKLDFIDFCNY 397
++ F C++
Sbjct: 2651 QCSNPCDQFNGGCSH 2665
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 97/177 (54%), Gaps = 15/177 (8%)
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
R D+ + L +GLA DW+G HIYW D++ RIEV +G R L + QP +
Sbjct: 4134 REVDLGLKYLMQPDGLAVDWVGRHIYWSDAKSQRIEVATLDGRYRKWLITTQLDQPAAIA 4193
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADS 257
++P G +FWTD G+ P+IE M+G +RS ++S + WPNGL++D + RVY++DS
Sbjct: 4194 VNPKLGL--MFWTDQGKQPKIESAWMNGEHRSVLVSENLGWPNGLSIDYLNDDRVYWSDS 4251
Query: 258 KLDFIDC-------KSLEIKTNVNYST--IFR-KLYWI--DEGGNGVPLKIGKANMD 302
K D I+ + L I + + IF KLYW+ ++G K GK N +
Sbjct: 4252 KEDVIEAIKYDGTDRRLIINEAMKPFSLDIFEDKLYWVAKEKGEVWRQNKFGKENKE 4308
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 57/238 (23%)
Query: 77 PGYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NR 123
P C Q+C G + C+C G+ L D +C N +F+++S +
Sbjct: 2027 PNACQQICLPVPGGMFSCACASGFKLSPDGRSCSPYN---SFMVVSMLPAVRGFSLELSD 2083
Query: 124 HSILVADLEEKGKDHRAQDIVVS------------------------------------- 146
HS + + +G++ D+ V+
Sbjct: 2084 HSEAMVPVAGQGRNVLHADVDVANGFIYWCDFSSSVRSSNGIRRIKPDGSNFTNVVTYGI 2143
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
G + + G+A DW G++Y+ ++ + IEV N T R VL K ++ PR +++DP
Sbjct: 2144 GANGIRGVALDWAAGNLYFTNAFVYETLIEVLRINTTYRRVLLKVSVDMPRHIIVDPK-- 2201
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
R+LFW D+G+ P+IER +D +NR+ ++S I P GL +D T +Y+ D LD I
Sbjct: 2202 HRYLFWADYGQKPKIERSFLDCTNRTVLVSEGIVTPRGLAMDHDTGYIYWVDDSLDLI 2259
Score = 85.5 bits (210), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 140/314 (44%), Gaps = 67/314 (21%)
Query: 78 GYCSQMCT------NTKGSYICSCNEGYVLEYDNHTCKAINH------------------ 113
G C+Q+C N Y C C G+ L+ D H C A+ +
Sbjct: 667 GGCAQVCVLSHRTDNGGLGYRCKCEFGFELDDDEHRCVAVKNFLLFSSKTAVRGIPFTLS 726
Query: 114 -----------SAAFLI---ISNRHS-ILVADLEE-----KGKDHRAQDIVVSG-LDLVE 152
S +F + +HS + +DL + + D ++++ + L+ VE
Sbjct: 727 TQEDVMVPVTGSPSFFVGIDFDAQHSTVFYSDLSKDIIYKQKIDGTGKEVITANRLESVE 786
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
L +DWI ++YW D L + V + + R +++ N+ PR +++ P+ G ++F +
Sbjct: 787 CLTFDWISRNLYWTDGGLKSVTVLRLADKSRRQIIS--NLNNPRSIVVHPTAG--YMFLS 842
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKLDFID 263
DW +I R DGS+ I++T + WPNGL +D + R+Y+ D S LD +D
Sbjct: 843 DWFRPAKIMRAWSDGSHLMPIVNTSLGWPNGLAIDWSASRLYWVDAFFDKIEHSTLDGLD 902
Query: 264 CKSLEIKTNVNYS---TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG----QLYE 316
K L + + T+F+ +I + G +++ K+ DG + +++ G +
Sbjct: 903 RKRLGHVDQMTHPFGLTVFKDNVFITDWRLGAIIRVRKS--DGGDMTVIRRGISSVMHVK 960
Query: 317 ALALDLENGMLYYS 330
A DL+ G Y S
Sbjct: 961 AYDADLQTGSNYCS 974
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 83/147 (56%), Gaps = 19/147 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ R +YW D +I A +DG L++ QL + A+A++ + G++
Sbjct: 4154 VGRHIYWSDAKSQ----RIEVATLDGRYRKWLITTQLDQPAAIAVNPKLGLM-------- 4201
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDF 394
FWTD G+ P+IE M+G +RS ++S + WPNGL++D + RVY++DSK D I+
Sbjct: 4202 ---FWTDQGKQPKIESAWMNGEHRSVLVSENLGWPNGLSIDYLNDDRVYWSDSKEDVIEA 4258
Query: 395 CNYDGTGRQQVILIDLMVEFTNDLMGD 421
YDGT R ++I+ + M F+ D+ D
Sbjct: 4259 IKYDGTDR-RLIINEAMKPFSLDIFED 4284
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 15/142 (10%)
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
++ + + + I R++Y+ D I DGSN +++ A+ LD
Sbjct: 2464 SNIGVTDGIAFDWINRRIYYSDFSNQ----TINSMAEDGSNRAVIARVSKPRAIVLD--- 2516
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384
C +++WTDWG N +IER + G+ R I++T + WPNGL LD+ T +Y+
Sbjct: 2517 --------PCRGYMYWTDWGTNAKIERATLGGNFRVPIVNTSLVWPNGLALDLETDLLYW 2568
Query: 385 ADSKLDFIDFCNYDGTGRQQVI 406
AD+ L I+ GT R+ V+
Sbjct: 2569 ADASLQKIERSTLTGTNREVVV 2590
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 29/186 (15%)
Query: 242 GLTLDIATRRVYFADSKLDFI-------------DCKSLEIKTNVNYSTIFRKLYWIDEG 288
G+ D V+++D D I LE + + I R LYW D G
Sbjct: 744 GIDFDAQHSTVFYSDLSKDIIYKQKIDGTGKEVITANRLESVECLTFDWISRNLYWTDGG 803
Query: 289 GNGVP-LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
V L++ D S I+ + ++ + G ++F +DW
Sbjct: 804 LKSVTVLRLA----DKSRRQIISNLNNPRSIVVHPTAG-----------YMFLSDWFRPA 848
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+I R DGS+ I++T + WPNGL +D + R+Y+ D+ D I+ DG R+++
Sbjct: 849 KIMRAWSDGSHLMPIVNTSLGWPNGLAIDWSASRLYWVDAFFDKIEHSTLDGLDRKRLGH 908
Query: 408 IDLMVE 413
+D M
Sbjct: 909 VDQMTH 914
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 25/182 (13%)
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
D KS +N+ IF Y+I DGS+ S+++ G L +ALD
Sbjct: 3189 DGKSCRQNSNIEPYLIFSNRYYIR-----------NLTTDGSSYSLILQG-LGNVVALDF 3236
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+ + + L+W D E IER+ ++ +NR TII+ ++ L +D +R++
Sbjct: 3237 D---------RVEKRLYWID-AEKQIIERMFLNKTNRETIINHRLRRAESLAVDWVSRKL 3286
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
Y+ D+ LD + D GR + ++ V+ N ++ + L + G +Y++ G
Sbjct: 3287 YWLDAILDCLFV--SDLEGRHRKMIAQHCVDANNTFCFEHPR-GIVLHPQRGHVYWADWG 3343
Query: 443 AE 444
Sbjct: 3344 VH 3345
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 94/237 (39%), Gaps = 48/237 (20%)
Query: 213 WGENP-RIERIGMDGSNRSTII-STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DGSNR+ + + GL LD +R +Y+ I+ +L+
Sbjct: 1795 WVENPGEIHRVKTDGSNRTVFAPLSLLGSSLGLALDWVSRNIYYTTPASRSIEVLTLKGD 1854
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
T + I +G PL +G +A+D G LY+S
Sbjct: 1855 TRYGKTLI---------ANDGTPLGVG----------------FPVGIAVDPARGKLYWS 1889
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 390
TD G +I MDG++ + + + +TLDI +++Y+A +
Sbjct: 1890 D-------HGTDSGVPAKIASANMDGTSLKILFTGNLQHLEVVTLDIQEQKLYWAVTSRG 1942
Query: 391 FIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I+ N DGT R +IL+ + L + LYYS E E ++
Sbjct: 1943 VIERGNVDGTER--MILVHHLAH------------PWGLVVYGSFLYYSDEQYEVIE 1985
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 129/315 (40%), Gaps = 46/315 (14%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNI-TQPRGMMLDPSPGTRWLFW 210
GL+ D+ IY++D+ L+ IE CD +G N R V+A D + P + L +++W
Sbjct: 1603 GLSIDYPNRLIYFMDAYLDYIEFCDYDGHNRRQVIASDLVLHHPHALTL----FEDFVYW 1658
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
TD G ++ G N+S ++ + ++ P G+T +R+ + C S
Sbjct: 1659 TDRGTRQVMQANKWHGGNQSVVMYS-VHQPLGITAIHPSRQPPSRNP------CASASCS 1711
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS--GQLYEALALDLE----N 324
S + Y +G L N + L+S + ++LD E +
Sbjct: 1712 HLCLLSAQAPRHYSC-ACPSGWNLSDDSVNCVRGDQPFLMSVRDNIIFGISLDPEVKSND 1770
Query: 325 GMLYYSTLKCTRWLFWTD------WGENP-RIERIGMDGSNRSTII-STKIYWPNGLTLD 376
M+ S ++ + + D W ENP I R+ DGSNR+ + + GL LD
Sbjct: 1771 AMVPISGIQHGYDVEFDDSEQFIYWVENPGEIHRVKTDGSNRTVFAPLSLLGSSLGLALD 1830
Query: 377 IATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVP-------ALAL 429
+R +Y+ I+ G R + L+ ++G P +A+
Sbjct: 1831 WVSRNIYYTTPASRSIEVLTLKGDTR-----------YGKTLIANDGTPLGVGFPVGIAV 1879
Query: 430 DLENGMLYYSTEGAE 444
D G LY+S G +
Sbjct: 1880 DPARGKLYWSDHGTD 1894
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 147/412 (35%), Gaps = 113/412 (27%)
Query: 28 CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCS------ 81
C A C H L + P C CP G LS+DSV C +QP S
Sbjct: 1705 CASASCSHLCLLSAQA----PRHYSCACPSGWNLSDDSVNCVRG---DQPFLMSVRDNII 1757
Query: 82 -------QMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK 134
++ +N I GY +E+D+ S F+ +E
Sbjct: 1758 FGISLDPEVKSNDAMVPISGIQHGYDVEFDD--------SEQFIYW----------VENP 1799
Query: 135 GKDHRAQD--------IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--- 183
G+ HR + +S L GLA DW+ +IY+ IEV G R
Sbjct: 1800 GEIHRVKTDGSNRTVFAPLSLLGSSLGLALDWVSRNIYYTTPASRSIEVLTLKGDTRYGK 1859
Query: 184 IVLAKD----NITQPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRSTIIST 235
++A D + P G+ +DP+ G L+W+D G + +I MDG++ + +
Sbjct: 1860 TLIANDGTPLGVGFPVGIAVDPARGK--LYWSDHGTDSGVPAKIASANMDGTSLKILFTG 1917
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
+ +TLDI +++Y+A + I+
Sbjct: 1918 NLQHLEVVTLDIQEQKLYWAVTSRGVIE-------------------------------- 1945
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
+ N+DG+ ILV L L + LYYS + IER+
Sbjct: 1946 --RGNVDGTERMILVH-HLAHPWGLVVYGSFLYYSD------------EQYEVIERVDKS 1990
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
N ++ + + GL RVY + D + C+ + QQ+ L
Sbjct: 1991 SGNNKVVLRDNVPYLRGL-------RVYHRRNAADSSNGCSNNPNACQQICL 2035
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 107/496 (21%), Positives = 174/496 (35%), Gaps = 102/496 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSN-TCHPTPLGA--LCTCPPGEIL 61
C+ + VCD DC +GADE C C + CSN C P+ + CP G
Sbjct: 80 CIPSSWVCDEDKDCSDGADEQQNCAGTTCSAQQMTCSNGQCIPSEYRCDHVSDCPDGSDE 139
Query: 62 SN------DSVTCQD------MNECEQPGYCSQMCTNTKGSYICSCNE-----------G 98
N D +TC + C+Q C + +CS E
Sbjct: 140 RNCHYPTCDQLTCANGACYNTSQRCDQKVDCRDSSDEANCTTLCSQKEFECGSGECILRA 199
Query: 99 YVLEYDN--------HTCKAINHSAAFLIISNRHSI---LVADLEEKGKDHRAQDIVVSG 147
YV ++DN C SN I V D ++ +D +D S
Sbjct: 200 YVCDHDNDCEDNSDERNCNYDTCGGHQFTCSNGQCINQNWVCDGDDDCQDSGDEDGCESN 259
Query: 148 LDLVEGLAYDWI---GGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR--GMMLDPS 202
+W G +D + + C E ++N+T R GM +
Sbjct: 260 QSHHRCYPREWACPGSGRCISIDKVCDGVPDCPEGDD------ENNVTSGRTCGMGV--- 310
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ + T + + P G ++ R + +DF
Sbjct: 311 ----------------CSVLNCEYQCHQTPFGGECFCPPGHIINSNDSR-----TCIDFD 349
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS----------- 311
DC+ I + R +EG + K++ S AS++ S
Sbjct: 350 DCQIWGICDQKCENRQGRHQCLCEEGYILERGQHCKSSDSFSAASVIFSNGRDLLVGDLH 409
Query: 312 GQLYEALALDLENGMLYYSTLKCTRW-LFWTDWGENPRIERI---GMDGSNRSTIISTKI 367
G+ + LA GM+ + +FWTD P E++ ++G N I++ +
Sbjct: 410 GRNFRILAESKNRGMVMGVDFHYQKHRVFWTD----PMQEKVFSTDINGLNTQEILNVSV 465
Query: 368 YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPAL 427
P L +D ++Y ++K++ ID N +G Q+V LI T +L G+
Sbjct: 466 DTPENLAVDWINNKLYLVETKVNRIDVVNLEGN--QRVTLI------TENLGHPRGI--- 514
Query: 428 ALDLENGMLYYSTEGA 443
ALD G L++S G+
Sbjct: 515 ALDPTVGYLFFSDWGS 530
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 11/75 (14%)
Query: 370 PNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALAL 429
P+GL +D R +Y++D+K I+ DG R+ +I L + A+A+
Sbjct: 4146 PDGLAVDWVGRHIYWSDAKSQRIEVATLDGRYRKWLITTQL-----------DQPAAIAV 4194
Query: 430 DLENGMLYYSTEGAE 444
+ + G+++++ +G +
Sbjct: 4195 NPKLGLMFWTDQGKQ 4209
Score = 33.5 bits (75), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 27/138 (19%)
Query: 304 SNASILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
S+ ++L+S + + +A D N +YYS N I + DGSNR+ I
Sbjct: 2457 SSPTVLLSNIGVTDGIAFDWINRRIYYSDFS------------NQTINSMAEDGSNRAVI 2504
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDF-IDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++ P + LD +Y+ D + I+ G R ++ L+
Sbjct: 2505 --ARVSKPRAIVLDPCRGYMYWTDWGTNAKIERATLGGNFRVPIV--------NTSLVWP 2554
Query: 422 NGVPALALDLENGMLYYS 439
NG LALDLE +LY++
Sbjct: 2555 NG---LALDLETDLLYWA 2569
Score = 32.7 bits (73), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
Query: 31 AECKHKFGLCSNTCHPTP-LGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKG 89
++ H G CS+ C P P +C CP G L D +TC+ E P +Q C G
Sbjct: 974 SQTTHANGDCSHFCFPVPNFQRVCGCPYGMKLQRDQMTCEGDPAREPP---TQQC----G 1026
Query: 90 SYICSCNEG 98
S CN G
Sbjct: 1027 SLSFPCNNG 1035
>sp|A2ARV4|LRP2_MOUSE Low-density lipoprotein receptor-related protein 2 OS=Mus musculus
GN=Lrp2 PE=1 SV=1
Length = 4660
Score = 240 bits (612), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 125/301 (41%), Positives = 167/301 (55%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ +CDG DCPNG DE P C+ C H G C++ C P GA C CP G L+ND
Sbjct: 1326 CVNLSALCDGVFDCPNGTDESPLCNQDSCLHFNGGCTHRCIQGPFGATCVCPIGYQLAND 1385
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
+ TC+D+NEC+ PG+CSQ C N +GS+ C+C+ Y LE D TCK L++++R
Sbjct: 1386 TKTCEDVNECDIPGFCSQHCVNMRGSFRCACDPEYTLESDGRTCKVTASENLLLVVASRD 1445
Query: 125 SI--------------LVADLE----------------------------EKGKDHRAQD 142
I LV D+ + G D R
Sbjct: 1446 KIIMDNITAHTHNIYSLVQDVSFVVALDFDSVTGRVFWSDLLEGKTWSAFQNGTDKRV-- 1503
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ SGL L E +A DWIG +IYW D L IEV +G++R VL N+T+PRG+ LDP
Sbjct: 1504 VHDSGLSLTEMIAVDWIGRNIYWTDYTLETIEVSKIDGSHRTVLISKNVTKPRGLALDPR 1563
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +FW+DWG +PRIER MDG+ R+ I+ KIYWP GL++D R +YF D+ LD+I
Sbjct: 1564 MGDNVMFWSDWGHHPRIERASMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYI 1623
Query: 263 D 263
+
Sbjct: 1624 E 1624
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/343 (37%), Positives = 177/343 (51%), Gaps = 63/343 (18%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCS-----NTCHPTPLGALCTCPPG 58
RC+++ KVCDG DCP G DE C GLCS CH TP G C CPPG
Sbjct: 277 RCISMDKVCDGVPDCPEGEDENNATSGRYCG--TGLCSILNCEYQCHQTPYGGECFCPPG 334
Query: 59 EIL-SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I+ SNDS TC D ++C+ G C Q C + +G + C C EGY+LE H + SAA
Sbjct: 335 HIINSNDSRTCIDFDDCQIWGICDQKCESRQGRHQCLCEEGYILERGQHCKSNDSFSAAS 394
Query: 118 LIISNRHSILVADLEEKG--------------------KDHRA----------------- 140
+I SN +LV DL + + HR
Sbjct: 395 IIFSNGRDLLVGDLHGRNFRILAESKNRGIVMGVDFHYQKHRVFWTDPMQAKVFSTDING 454
Query: 141 ---QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
Q+I+ +D E LA DWI +Y +++R+NRI+V + G R+ L +N+ PRG+
Sbjct: 455 LNTQEILNVSIDAPENLAVDWINNKLYLVETRVNRIDVVNLEGNQRVTLITENLGHPRGI 514
Query: 198 MLDPSPGTRWLFWTDWGE---NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
LDP+ G +LF++DWG P++ER MDGSNR +++TK+ WP G+TLD+ ++RVY+
Sbjct: 515 ALDPTVG--YLFFSDWGSLSGQPKVERAFMDGSNRKDLVTTKLGWPAGITLDLVSKRVYW 572
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
DS+ D+I+ V Y I RK + GG+ VP G
Sbjct: 573 VDSRYDYIE--------TVTYDGIQRKT--VARGGSLVPHPFG 605
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 181/410 (44%), Gaps = 96/410 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + VC+ DC + +DE GC + EC+ C + C T C+C PG L
Sbjct: 3088 HCIEMGTVCNHVDDCSDNSDEK-GCGINECQDSSISHCDHNCTDTITSFYCSCLPGYKLM 3146
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P CSQ C N GSYIC C GY+ E D +C+ ++ +L+ S
Sbjct: 3147 SDKRTCVDIDECKETPQLCSQKCENVIGSYICKCAPGYIREPDGKSCRQNSNIEPYLVFS 3206
Query: 122 NRHSI--LVAD-----------------------------------LEEKGKDHRAQDIV 144
NR+ I L D +E + Q+ +
Sbjct: 3207 NRYYIRNLTIDGTSYSLILQGLGNVVALDFDRVEERLYWIDAEKQIIERMFLNKTNQETI 3266
Query: 145 VSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPR 195
+S L E LA DW+ +YWLD+ L+ + V D G R +LA+ + PR
Sbjct: 3267 ISHRLRRAESLAVDWVSRKLYWLDAILDCLFVSDLEGRQRKMLAQHCVDANNTFCFENPR 3326
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G++L P G +++W DWG++ I RIGMDG+N++ IISTKI WPN +T+D +Y+A
Sbjct: 3327 GIVLHPQRG--YVYWADWGDHAYIARIGMDGTNKTVIISTKIEWPNAITIDYTNDLLYWA 3384
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ L +I+ LE G + + G L
Sbjct: 3385 DAHLGYIEFSDLE----------------------------------GHHRHTVYDGTLP 3410
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
AL ++ T +FWTDW + DGS R +++T
Sbjct: 3411 HPFAL-----TIFEDT------VFWTDWNTRTVEKGNKYDGSGRVVLVNT 3449
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 182/429 (42%), Gaps = 96/429 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAE---CKHKFGLCSNTCHPTPLGA-LCTCPPGEI 60
CV+ VCD DC + +DE GC+L E C K +C C G +C+C PG
Sbjct: 3942 CVSQHYVCDNVDDCGDLSDET-GCNLGENRTCAEK--ICEQNCTQLSNGGFICSCRPGFK 3998
Query: 61 LSN-DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGY--VLEYDNHTCKAINHSAAF 117
S D +CQD+NECE+ G C Q C N+KGSY C C +G+ + + C A
Sbjct: 3999 PSTLDKNSCQDINECEEFGICPQSCRNSKGSYECFCVDGFKSMSTHYGERCAADGSPPLL 4058
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L+ N EK ++ ++ + +D YDW D
Sbjct: 4059 LLPENVRIRKYNISSEKFSEYLEEEEHIQAID------YDW------------------D 4094
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK- 236
G V+ ++Q + + D+ G + R + K
Sbjct: 4095 PEGIGLSVVYYTVLSQGSQFG-----AIKRAYLPDF-------ESGSNNPVREVDLGLKY 4142
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI 296
+ P+GL +D R +Y++D+K +I
Sbjct: 4143 LMQPDGLAVDWVGRHIYWSDAKSQ----------------------------------RI 4168
Query: 297 GKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
A +DG L++ QL + A+A++ + G++++ TD G+ P+IE M
Sbjct: 4169 EVATLDGRYRKWLITTQLDQPAAIAVNPKLGLMFW-----------TDQGKQPKIESAWM 4217
Query: 355 DGSNRSTIISTKIYWPNGLTLD-IATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
+G +RS + S + WPNGL++D + R+Y++DSK D I+ YDGT R ++I+ D M
Sbjct: 4218 NGEHRSVLASANLGWPNGLSIDYLNGDRIYWSDSKEDVIESIKYDGTDR-RLIINDAMKP 4276
Query: 414 FTNDLMGDN 422
F+ D+ D
Sbjct: 4277 FSLDIFEDQ 4285
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 124/255 (48%), Gaps = 50/255 (19%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I++S + + +G+A+DWI IY+ D I E+G+NR V+A+ +++PR ++LDP
Sbjct: 2461 ILLSNIGVTDGIAFDWINRRIYYSDFSNQTINSMAEDGSNRAVIAR--VSKPRAIVLDPC 2518
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWG N +IER + G+ R I++T + WPNGLTLD+ T +Y+AD+ L
Sbjct: 2519 RG--YMYWTDWGTNAKIERATLGGNFRVPIVNTSLVWPNGLTLDLETDLLYWADASLQ-- 2574
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
KI ++ + GSN +++S +
Sbjct: 2575 --------------------------------KIERSTLTGSNREVVISTAFHSF----- 2597
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G+ Y ++++WTD+ DGS+ + + P+G++ + T++
Sbjct: 2598 --GLTVYG-----QYIYWTDFYTKKIYRANKYDGSDLIAMTTRLPTQPSGISTVVKTQQQ 2650
Query: 383 YFADSKLDFIDFCNY 397
++ F C++
Sbjct: 2651 QCSNPCDQFNGGCSH 2665
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 108/238 (45%), Gaps = 57/238 (23%)
Query: 77 PGYCSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NR 123
P C Q+C G + C+C G+ L D +C N +F+++S +
Sbjct: 2027 PNACQQICLPVPGGMFSCACASGFKLSPDGRSCSPYN---SFIVVSMLPAVRGFSLELSD 2083
Query: 124 HSILVADLEEKGKDHRAQDIVVS------------------------------------- 146
HS + + +G++ D+ V+
Sbjct: 2084 HSEAMVPVAGQGRNVLHADVDVANGFIYWCDFSSSVRSSNGIRRIKPNGSNFTNIVTYGI 2143
Query: 147 GLDLVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204
G + + G+A DW+ G++Y+ ++ + IEV N T R VL K ++ PR +++DP
Sbjct: 2144 GANGIRGVAVDWVAGNLYFTNAFVYETLIEVIRINTTYRRVLLKVSVDMPRHIVVDPK-- 2201
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
R+LFW D+G+ P+IER +D +NR+ ++S I P GL +D T +Y+ D LD I
Sbjct: 2202 HRYLFWADYGQKPKIERSFLDCTNRTVLVSEGIVTPRGLAVDHDTGYIYWVDDSLDII 2259
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 140/314 (44%), Gaps = 67/314 (21%)
Query: 78 GYCSQMCT------NTKGSYICSCNEGYVLEYDNHTCKAINH------------------ 113
G C+Q+C N Y C C G+ L+ D H C A+ +
Sbjct: 667 GGCAQICVLSHRTDNGGLGYRCKCEFGFELDADEHHCVAVKNFLLFSSQTAVRGIPFTLS 726
Query: 114 -----------SAAFLI---ISNRHS-ILVADLE-----EKGKDHRAQDIVVSG-LDLVE 152
S +F + +HS I +DL ++ D ++++ + L VE
Sbjct: 727 TQEDVMVPVTGSPSFFVGIDFDAQHSTIFYSDLSKNIIYQQKIDGTGKEVITANRLQNVE 786
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
L++DWI ++YW D + V + + R +++ N+ PR +++ P+ G ++F +
Sbjct: 787 CLSFDWISRNLYWTDGGSKSVTVMKLADKSRRQIIS--NLNNPRSIVVHPAAG--YMFLS 842
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKLDFID 263
DW +I R DGS+ I++T + WPNGL +D +T R+Y+ D S LD +D
Sbjct: 843 DWFRPAKIMRAWSDGSHLMPIVNTSLGWPNGLAIDWSTSRLYWVDAFFDKIEHSNLDGLD 902
Query: 264 CKSLEIKTNVNYS---TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG----QLYE 316
K L + + T+F+ ++ + G +++ K+ DG + +++ G +
Sbjct: 903 RKRLGHVDQMTHPFGLTVFKDNVFLTDWRLGAIIRVRKS--DGGDMTVVRRGISSIMHVK 960
Query: 317 ALALDLENGMLYYS 330
A DL+ G Y S
Sbjct: 961 AYDADLQTGTNYCS 974
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 15/142 (10%)
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLEN 324
++ + + + I R++Y+ D I DGSN +++ A+ LD
Sbjct: 2464 SNIGVTDGIAFDWINRRIYYSDFSNQ----TINSMAEDGSNRAVIARVSKPRAIVLD--- 2516
Query: 325 GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384
C +++WTDWG N +IER + G+ R I++T + WPNGLTLD+ T +Y+
Sbjct: 2517 --------PCRGYMYWTDWGTNAKIERATLGGNFRVPIVNTSLVWPNGLTLDLETDLLYW 2568
Query: 385 ADSKLDFIDFCNYDGTGRQQVI 406
AD+ L I+ G+ R+ VI
Sbjct: 2569 ADASLQKIERSTLTGSNREVVI 2590
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 29/186 (15%)
Query: 242 GLTLDIATRRVYFAD--------SKLD-----FIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
G+ D ++++D K+D I L+ +++ I R LYW D G
Sbjct: 744 GIDFDAQHSTIFYSDLSKNIIYQQKIDGTGKEVITANRLQNVECLSFDWISRNLYWTDGG 803
Query: 289 GNGVP-LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347
V +K+ D S I+ + ++ + G ++F +DW
Sbjct: 804 SKSVTVMKLA----DKSRRQIISNLNNPRSIVVHPAAG-----------YMFLSDWFRPA 848
Query: 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
+I R DGS+ I++T + WPNGL +D +T R+Y+ D+ D I+ N DG R+++
Sbjct: 849 KIMRAWSDGSHLMPIVNTSLGWPNGLAIDWSTSRLYWVDAFFDKIEHSNLDGLDRKRLGH 908
Query: 408 IDLMVE 413
+D M
Sbjct: 909 VDQMTH 914
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 111/509 (21%), Positives = 185/509 (36%), Gaps = 157/509 (30%)
Query: 5 CVNLTKVCDGKTDCPNGAD-----------EGPG---CDLAECKHKFGLCSNT------- 43
C+ +CDG+ DC +G+D E P CD + C + LC+
Sbjct: 3856 CIQSFWICDGENDCVDGSDEEIHLCFNVPCESPQRFRCDNSRCIYGHQLCNGVDDCGDGS 3915
Query: 44 ------CHPTPLGALCT-----CPPGEILSNDSVTCQDMNEC----EQPG---------- 78
C P CT C G +S V C ++++C ++ G
Sbjct: 3916 DEKEEHCR-KPTHKPCTDTEYKCSNGNCVSQHYV-CDNVDDCGDLSDETGCNLGENRTCA 3973
Query: 79 --YCSQMCTN-TKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIISN-------RHSIL 127
C Q CT + G +ICSC G+ D ++C+ IN F I +
Sbjct: 3974 EKICEQNCTQLSNGGFICSCRPGFKPSTLDKNSCQDINECEEFGICPQSCRNSKGSYECF 4033
Query: 128 VADLEEKGKDHRAQDIVVSGL-----------------------------DLVEGLAYDW 158
D + H + G + ++ + YDW
Sbjct: 4034 CVDGFKSMSTHYGERCAADGSPPLLLLPENVRIRKYNISSEKFSEYLEEEEHIQAIDYDW 4093
Query: 159 ----IGGHIYWLD--------SRLNRIEVCD-ENGTNRIV----LAKDNITQPRGMMLDP 201
IG + + + R + D E+G+N V L + QP G+ +D
Sbjct: 4094 DPEGIGLSVVYYTVLSQGSQFGAIKRAYLPDFESGSNNPVREVDLGLKYLMQPDGLAVDW 4153
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
R ++W+D ++ RIE +DG R +I+T++ P + + + KL
Sbjct: 4154 V--GRHIYWSD-AKSQRIEVATLDGRYRKWLITTQLDQPAAIAV----------NPKLGL 4200
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALA 319
++W D+G KI A M+G + S+L S L L+
Sbjct: 4201 --------------------MFWTDQGKQP---KIESAWMNGEHRSVLASANLGWPNGLS 4237
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+D NG Y W+D E+ IE I DG++R II+ + +LDI
Sbjct: 4238 IDYLNGDRIY----------WSDSKED-VIESIKYDGTDRRLIINDAM---KPFSLDIFE 4283
Query: 380 RRVYFADSKLDFIDFCNYDGTGRQQVILI 408
++Y+ + + N G G ++ +L+
Sbjct: 4284 DQLYWVAKEKGEVWRQNKFGKGNKEKLLV 4312
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 93/237 (39%), Gaps = 48/237 (20%)
Query: 213 WGENP-RIERIGMDGSNRSTII-STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DGSNR+ + + GL LD +R +Y+ I+ +L
Sbjct: 1795 WVENPGEIHRVKTDGSNRTAFAPLSLLGSSLGLALDWVSRNIYYTTPASRSIEVLTLRGD 1854
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
T + I +G PL +G +A+D G LY+S
Sbjct: 1855 TRYGKTLI---------TNDGTPLGVG----------------FPVGIAVDPARGKLYWS 1889
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 390
TD G +I MDG++ + + + +TLDI +++Y+A +
Sbjct: 1890 D-------HGTDSGVPAKIASANMDGTSLKILFTGNMEHLEVVTLDIQEQKLYWAVTSRG 1942
Query: 391 FIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I+ N DGT R +IL+ + L + LYYS E E ++
Sbjct: 1943 VIERGNVDGTER--MILVHHLAH------------PWGLVVHGSFLYYSDEQYEVIE 1985
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 130/310 (41%), Gaps = 36/310 (11%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNI-TQPRGMMLDPSPGTRWLFW 210
GL+ D+ IY++D+ L+ IE CD +G N R V+A D + P + L +FW
Sbjct: 1603 GLSIDYPNRLIYFMDAYLDYIEFCDYDGQNRRQVIASDLVLHHPHALTLFEDS----VFW 1658
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
TD G + ++ G N+S ++ + + P G+ + I R + + C L +
Sbjct: 1659 TDRGTHQVMQANKWHGRNQSVVMYS-VPQPLGI-IAIHPSRQPSSPNPCASATCSHLCLL 1716
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ--LYEALALDLE----N 324
+ ++ +G L N + L+S + + ++LD E +
Sbjct: 1717 ------SAQEPRHYSCACPSGWNLSDDSVNCVRGDQPFLISVRENVIFGISLDPEVKSND 1770
Query: 325 GMLYYSTLKCTRWLFWTD------WGENP-RIERIGMDGSNRSTII-STKIYWPNGLTLD 376
M+ S ++ + + D W ENP I R+ DGSNR+ + + GL LD
Sbjct: 1771 AMVPISGIQHGYDVEFDDSEQFIYWVENPGEIHRVKTDGSNRTAFAPLSLLGSSLGLALD 1830
Query: 377 IATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND--LMGDNGVPALALDLENG 434
+R +Y+ I+ G R LI TND +G +A+D G
Sbjct: 1831 WVSRNIYYTTPASRSIEVLTLRGDTRYGKTLI------TNDGTPLGVGFPVGIAVDPARG 1884
Query: 435 MLYYSTEGAE 444
LY+S G +
Sbjct: 1885 KLYWSDHGTD 1894
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 95/262 (36%), Gaps = 67/262 (25%)
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNR---IVLAKD----NITQPRGMMLDPSPGTRWLF 209
DW+ +IY+ IEV G R ++ D + P G+ +DP+ G L+
Sbjct: 1830 DWVSRNIYYTTPASRSIEVLTLRGDTRYGKTLITNDGTPLGVGFPVGIAVDPARGK--LY 1887
Query: 210 WTDWGEN----PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
W+D G + +I MDG++ + + + +TLDI +++Y+A + I+
Sbjct: 1888 WSDHGTDSGVPAKIASANMDGTSLKILFTGNMEHLEVVTLDIQEQKLYWAVTSRGVIE-- 1945
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
+ N+DG+ ILV L L +
Sbjct: 1946 --------------------------------RGNVDGTERMILVH-HLAHPWGLVVHGS 1972
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
LYYS + IER+ + + I + GL RVY
Sbjct: 1973 FLYYSD------------EQYEVIERVDKSSGSNKVVFRDNIPYLRGL-------RVYHH 2013
Query: 386 DSKLDFIDFCNYDGTGRQQVIL 407
+ D + C+ + QQ+ L
Sbjct: 2014 RNAADSSNGCSNNPNACQQICL 2035
Score = 35.4 bits (80), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 45/114 (39%), Gaps = 25/114 (21%)
Query: 31 AECKHKFGLCSNTCHPTP-LGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKG 89
++ H G CS+ C P P +C CP G L D +TC+ E P +Q C G
Sbjct: 974 SQTTHPNGDCSHFCFPVPNFQRVCGCPYGMKLQRDQMTCEGDPAREPP---TQQC----G 1026
Query: 90 SYICSCNEGYVL--------------EYDNHTCKAINH---SAAFLIISNRHSI 126
S CN G + D H C A+N+ S+AF + I
Sbjct: 1027 SSSFPCNNGKCVPSIFRCDGVDDCHDNSDEHQCGALNNTCSSSAFTCVHGGQCI 1080
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 11/75 (14%)
Query: 370 PNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALAL 429
P+GL +D R +Y++D+K I+ DG R+ +I L + A+A+
Sbjct: 4146 PDGLAVDWVGRHIYWSDAKSQRIEVATLDGRYRKWLITTQL-----------DQPAAIAV 4194
Query: 430 DLENGMLYYSTEGAE 444
+ + G+++++ +G +
Sbjct: 4195 NPKLGLMFWTDQGKQ 4209
>sp|P98164|LRP2_HUMAN Low-density lipoprotein receptor-related protein 2 OS=Homo sapiens
GN=LRP2 PE=1 SV=3
Length = 4655
Score = 228 bits (581), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 164/301 (54%), Gaps = 44/301 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CVNL+ VCDG DCPNG DE P C+ C G C++ C P GA C CP G +L+ND
Sbjct: 1325 CVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHECVQEPFGAKCLCPLGFLLAND 1384
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRH 124
S TC+D++EC+ G CSQ C N +GS+ CSC+ GY+LE D TCK + L++++++
Sbjct: 1385 SKTCEDIDECDILGSCSQHCYNMRGSFRCSCDTGYMLESDGRTCKVTASESLLLLVASQN 1444
Query: 125 SILVADLE------------------------------------------EKGKDHRAQD 142
I+ + + G D R
Sbjct: 1445 KIIADSVTSQVHNIYSLVENGSYIVAVDFDSISGRIFWSDATQGKTWSAFQNGTDRRV-- 1502
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+ S + L E +A DW+G ++YW D L IEV +G++R VL N+T PRG+ LDP
Sbjct: 1503 VFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKNLTNPRGLALDPR 1562
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
LFW+DWG +PRIER MDGS R+ I+ KI+WP GLT+D R +YF DS LD++
Sbjct: 1563 MNEHLLFWSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYM 1622
Query: 263 D 263
D
Sbjct: 1623 D 1623
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 178/353 (50%), Gaps = 69/353 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADE-----GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG 58
RC+++ KVCDG DCP DE G C + C C CH TP G C CPPG
Sbjct: 278 RCISIYKVCDGILDCPGREDENNTSTGKYCSMTLCSALN--CQYQCHETPYGGACFCPPG 335
Query: 59 EILS-NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
I++ NDS TC + ++C+ G C Q C + G ++C C EGY+LE + + A
Sbjct: 336 YIINHNDSRTCVEFDDCQIWGICDQKCESRPGRHLCHCEEGYILERGQYCKANDSFGEAS 395
Query: 118 LIISNRHSILVADLEEKGKDHR-------------------------------------- 139
+I SN +L+ D+ G+ R
Sbjct: 396 IIFSNGRDLLIGDIH--GRSFRILVESQNRGVAVGVAFHYHLQRVFWTDTVQNKVFSVDI 453
Query: 140 ----AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
Q+++ ++ E LA DW+ IY +++++NRI++ + +G+ R+ L +N+ PR
Sbjct: 454 NGLNIQEVLNVSVETPENLAVDWVNNKIYLVETKVNRIDMVNLDGSYRVTLITENLGHPR 513
Query: 196 GMMLDPSPGTRWLFWTDW----GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
G+ +DP+ G +LF++DW GE P++ER MDGSNR ++ TK+ WP G+TLD+ ++R
Sbjct: 514 GIAVDPTVG--YLFFSDWESLSGE-PKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKR 570
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
VY+ DS+ D+I+ V Y I RK + GG+ +P G + +G
Sbjct: 571 VYWVDSRFDYIE--------TVTYDGIQRKT--VVHGGSLIPHPFGVSLFEGQ 613
Score = 179 bits (455), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 181/410 (44%), Gaps = 96/410 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ + K+C+ DC + +DE GC + EC C + C T C+C PG L
Sbjct: 3086 RCIEMMKLCNHLDDCLDNSDEK-GCGINECHDPSISGCDHNCTDTLTSFYCSCRPGYKLM 3144
Query: 63 NDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
+D TC D++EC E P CSQ C N GSYIC C GY+ E D TC+ ++ +LI S
Sbjct: 3145 SDKRTCVDIDECTEMPFVCSQKCENVIGSYICKCAPGYLREPDGKTCRQNSNIEPYLIFS 3204
Query: 122 NRH--------------------SILVADLEEKGK------------------DHRAQDI 143
NR+ +++ D + K + I
Sbjct: 3205 NRYYLRNLTIDGYFYSLILEGLDNVVALDFDRVEKRLYWIDTQRQVIERMFLNKTNKETI 3264
Query: 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI--------TQPR 195
+ L E LA DW+ +YWLD+RL+ + V D NG +R +LA+ + PR
Sbjct: 3265 INHRLPAAESLAVDWVSRKLYWLDARLDGLFVSDLNGGHRRMLAQHCVDANNTFCFDNPR 3324
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
G+ L P G +L+W DWG I R+GMDG+N+S IISTK+ WPNG+T+D +Y+A
Sbjct: 3325 GLALHPQYG--YLYWADWGHRAYIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWA 3382
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ L +I+ LE G + + G L
Sbjct: 3383 DAHLGYIEYSDLE----------------------------------GHHRHTVYDGALP 3408
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
A+ + +Y WTDW + DGSNR T+++T
Sbjct: 3409 HPFAITIFEDTIY-----------WTDWNTRTVEKGNKYDGSNRQTLVNT 3447
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 142/320 (44%), Gaps = 63/320 (19%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLA-ECKHKFGLCSNTCHPTPLGA-LCTCPPG-EI 60
C+ VCD DC + +DE GC+ E +C C G +C+C G E
Sbjct: 3939 HCIPHDNVCDDADDCGDWSDE-LGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFET 3997
Query: 61 LSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN--HTCKAINHSAAFL 118
D +C D+NECEQ G C Q C NTKGSY C C +G+ D C A S L
Sbjct: 3998 NVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAAEGSSPLLL 4057
Query: 119 IISN-----------RHSILVADLE----------------------------------- 132
+ N R S + D E
Sbjct: 4058 LPDNVRIRKYNLSSERFSEYLQDEEYIQAVDYDWDPKDIGLSVVYYTVRGEGSRFGAIKR 4117
Query: 133 ------EKGKDHRAQ--DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
E G+++ Q D+ + + +G+A DW+G HIYW D + RIEV +G R
Sbjct: 4118 AYIPNFESGRNNLVQEVDLKLKYVMQPDGIAVDWVGRHIYWSDVKNKRIEVAKLDGRYRK 4177
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
L ++ QP + ++P G +FWTDWG+ P+IE M+G +R+ ++ + WP GL+
Sbjct: 4178 WLISTDLDQPAAIAVNPKLGL--MFWTDWGKEPKIESAWMNGEDRNILVFEDLGWPTGLS 4235
Query: 245 LD-IATRRVYFADSKLDFID 263
+D + R+Y++D K D I+
Sbjct: 4236 IDYLNNDRIYWSDFKEDVIE 4255
Score = 95.1 bits (235), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 114/253 (45%), Gaps = 61/253 (24%)
Query: 80 CSQMCTNTKGS-YICSCNEGYVLEYDNHTCKAINHSAAFLIIS------------NRHSI 126
C Q+C G + C+C G+ L DN +C N +F+++S + HS
Sbjct: 2029 CQQICLPVPGGLFSCACATGFKLNPDNRSCSPYN---SFIVVSMLSAIRGFSLELSDHSE 2085
Query: 127 LVADLEEKGKDHRAQDIVVS-------------------------------------GLD 149
+ + +G++ D+ VS G +
Sbjct: 2086 TMVPVAGQGRNALHVDVDVSSGFIYWCDFSSSVASDNAIRRIKPDGSSLMNIVTHGIGEN 2145
Query: 150 LVEGLAYDWIGGHIYWLDSRLNR--IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
V G+A DW+ G++Y+ ++ ++ IEV N T R VL K + PR +++DP R+
Sbjct: 2146 GVRGIAVDWVAGNLYFTNAFVSETLIEVLRINTTYRRVLLKVTVDMPRHIVVDPK--NRY 2203
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
LFW D+G+ P+IER +D +NR+ ++S I P GL +D + VY+ D LD I
Sbjct: 2204 LFWADYGQRPKIERSFLDCTNRTVLVSEGIVTPRGLAVDRSDGYVYWVDDSLDII----A 2259
Query: 268 EIKTNVNYSTIFR 280
I+ N S + R
Sbjct: 2260 RIRINGENSEVIR 2272
Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 75/125 (60%), Gaps = 4/125 (3%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ SG+ +G+A+DWI IY+ D I E+G+NR V+A+ + +PR ++LDP
Sbjct: 2460 VIASGIGTADGIAFDWITRRIYYSDYLNQMINSMAEDGSNRTVIAR--VPKPRAIVLDPC 2517
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +L+W DW + +IER + G+ R I+++ + P+GLTLD +Y+ D+ L I
Sbjct: 2518 QG--YLYWADWDTHAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRI 2575
Query: 263 DCKSL 267
+ +L
Sbjct: 2576 ERSTL 2580
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 64/303 (21%)
Query: 68 CQDMNE-CEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
C+D N CEQ S N + C C G+ L+ D C A+ + FLI S++ +I
Sbjct: 663 CKDNNGGCEQVCVLSHRTDNDGLGFRCKCTFGFQLDTDERHCIAVQN---FLIFSSQVAI 719
Query: 127 ----LVADLEEK-------------GKDHRAQDIVVSGLDL------------------- 150
+E G D AQD + D+
Sbjct: 720 RGIPFTLSTQEDVMVPVSGNPSFFVGIDFDAQDSTIFFSDMSKHMIFKQKIDGTGREILA 779
Query: 151 ------VEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSP 203
VE LA+DWI ++YW DS I V + T R V+ + PR +++ P
Sbjct: 780 ANRVENVESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTVVQY--LNNPRSVVVHPFA 837
Query: 204 GTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G +LF+TDW +I R DGS+ +I+T + WPNGL +D A R+Y+ D+ D I+
Sbjct: 838 G--YLFFTDWFRPAKIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRLYWVDAYFDKIE 895
Query: 264 CKS-----------LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+ +E T+ IF + + + G +++ KA DG +++ SG
Sbjct: 896 HSTFDGLDRRRLGHIEQMTHPFGLAIFGEHLFFTDWRLGAIIRVRKA--DGGEMTVIRSG 953
Query: 313 QLY 315
Y
Sbjct: 954 IAY 956
Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 111/457 (24%), Positives = 178/457 (38%), Gaps = 106/457 (23%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT-----CPP 57
+RC+ +VC+G DC +G DE C+ PTP CT C
Sbjct: 3894 NRCIYSHEVCNGVDDCGDGTDETE----EHCRK----------PTP--KPCTEYEYKCGN 3937
Query: 58 GEILSNDSVTCQDMNECEQ----------------PGYCSQMCTN-TKGSYICSCNEGYV 100
G + +D+V C D ++C C Q CT +G +ICSC G+
Sbjct: 3938 GHCIPHDNV-CDDADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFE 3996
Query: 101 LE-YDNHTCKAINHSAAFLIISNR-------HSILVADLEEKGKDHRAQDIVVSGLDLVE 152
+D +C IN F + + AD D + G +
Sbjct: 3997 TNVFDRTSCLDINECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAAEGSSPLL 4056
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
L D + Y L S + DE + A D P+ + G +++T
Sbjct: 4057 -LLPDNVRIRKYNLSSERFSEYLQDE----EYIQAVDYDWDPKDI------GLSVVYYTV 4105
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK-- 270
GE R I + Y PN F + + + L++K
Sbjct: 4106 RGEGSRFGAI------------KRAYIPN------------FESGRNNLVQEVDLKLKYV 4141
Query: 271 ---TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENG 325
+ + R +YW D +I A +DG L+S L + A+A++ + G
Sbjct: 4142 MQPDGIAVDWVGRHIYWSDVKNK----RIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLG 4197
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD-IATRRVYF 384
++ FWTDWG+ P+IE M+G +R+ ++ + WP GL++D + R+Y+
Sbjct: 4198 LM-----------FWTDWGKEPKIESAWMNGEDRNILVFEDLGWPTGLSIDYLNNDRIYW 4246
Query: 385 ADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
+D K D I+ YDGT R +VI + M ++ D+ D
Sbjct: 4247 SDFKEDVIETIKYDGTDR-RVIAKEAMNPYSLDIFED 4282
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 33/151 (21%)
Query: 296 IGKANMDGSNASILVSGQL--YEALALDLENGMLY-----YSTLKCTR------------ 336
I K +DG+ IL + ++ E+LA D + LY Y ++ R
Sbjct: 765 IFKQKIDGTGREILAANRVENVESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTVVQY 824
Query: 337 --------------WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+LF+TDW +I R DGS+ +I+T + WPNGL +D A R+
Sbjct: 825 LNNPRSVVVHPFAGYLFFTDWFRPAKIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRL 884
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
Y+ D+ D I+ +DG R+++ I+ M
Sbjct: 885 YWVDAYFDKIEHSTFDGLDRRRLGHIEQMTH 915
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 45/181 (24%)
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
G + T+I++ I +G+ D TRR+Y++D ++
Sbjct: 2454 GIHTPTVIASGIGTADGIAFDWITRRIYYSD---------------------------YL 2486
Query: 286 DEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
++ I DGSN +++ A+ LD C +L+W DW
Sbjct: 2487 NQ-------MINSMAEDGSNRTVIARVPKPRAIVLD-----------PCQGYLYWADWDT 2528
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+ +IER + G+ R I+++ + P+GLTLD +Y+ D+ L I+ G R+ +
Sbjct: 2529 HAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRIERSTLTGVDREVI 2588
Query: 406 I 406
+
Sbjct: 2589 V 2589
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 50/238 (21%)
Query: 213 WGENP-RIERIGMDGSNRSTIISTKIYWPN-GLTLDIATRRVYFADSKLDFIDCKSLEIK 270
W ENP I R+ DG+NR+ S + P+ L LD +R +Y + + +S+E+
Sbjct: 1794 WVENPGEIHRVKTDGTNRTVFASISMVGPSMNLALDWISRNLYSTNPRT-----QSIEVL 1848
Query: 271 TNVNYSTIFRKLYWIDEGGN-GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYY 329
T ++ +RK ++G GV IG + +D G LY+
Sbjct: 1849 T-LHGDIRYRKTLIANDGTALGVGFPIG--------------------ITVDPARGKLYW 1887
Query: 330 STLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 389
S TD G +I MDG++ T+ + + +TLDI +++Y+A +
Sbjct: 1888 SDQG-------TDSGVPAKIASANMDGTSVKTLFTGNLEHLECVTLDIEEQKLYWAVTGR 1940
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447
I+ N DGT R +IL+ + + + + LYY+ E E ++
Sbjct: 1941 GVIERGNVDGTDR--MILVHQLSH------------PWGIAVHDSFLYYTDEQYEVIE 1984
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 56/219 (25%)
Query: 131 LEEKGKDHRAQD-----IVVSGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTN 182
+E G+ HR + V + + +V LA DWI ++Y + R IEV +G
Sbjct: 1795 VENPGEIHRVKTDGTNRTVFASISMVGPSMNLALDWISRNLYSTNPRTQSIEVLTLHGDI 1854
Query: 183 R---IVLAKDN----ITQPRGMMLDPSPGTRWLFWTDWGEN----PRIERIGMDGSNRST 231
R ++A D + P G+ +DP+ G L+W+D G + +I MDG++ T
Sbjct: 1855 RYRKTLIANDGTALGVGFPIGITVDPARGK--LYWSDQGTDSGVPAKIASANMDGTSVKT 1912
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+ + + +TLDI +++Y+A + G G
Sbjct: 1913 LFTGNLEHLECVTLDIEEQKLYWAVT-------------------------------GRG 1941
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
V I + N+DG++ ILV QL + + + LYY+
Sbjct: 1942 V---IERGNVDGTDRMILVH-QLSHPWGIAVHDSFLYYT 1976
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 130/314 (41%), Gaps = 44/314 (14%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVLAKDNITQ-PRGMMLDPSPGTRWLFW 210
GL D+ +Y++DS L+ ++ CD NG + R V+A D I + P + L ++W
Sbjct: 1602 GLTIDYPNRLLYFMDSYLDYMDFCDYNGHHRRQVIASDLIIRHPYALTLFEDS----VYW 1657
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
TD + G N+S ++ I WP G+ + + + + + F C L +
Sbjct: 1658 TDRATRRVMRANKWHGGNQSVVM-YNIQWPLGI-VAVHPSKQPNSVNPCAFSRCSHLCLL 1715
Query: 271 TNVN---YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE---- 323
++ YS + G + + D I V + ++L+ E
Sbjct: 1716 SSQGPHFYSCVC-------PSGWSLSPDLLNCLRDDQPFLITVRQHIIFGISLNPEVKSN 1768
Query: 324 NGMLYYSTLK---------CTRWLFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPN-G 372
+ M+ + ++ ++++W ENP I R+ DG+NR+ S + P+
Sbjct: 1769 DAMVPIAGIQNGLDVEFDDAEQYIYWV---ENPGEIHRVKTDGTNRTVFASISMVGPSMN 1825
Query: 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND--LMGDNGVPALALD 430
L LD +R +Y + + I+ G R + LI ND +G + +D
Sbjct: 1826 LALDWISRNLYSTNPRTQSIEVLTLHGDIRYRKTLI------ANDGTALGVGFPIGITVD 1879
Query: 431 LENGMLYYSTEGAE 444
G LY+S +G +
Sbjct: 1880 PARGKLYWSDQGTD 1893
Score = 38.5 bits (88), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
IV S L + GL D+ +YW+D+ L RIE G +R V+ + G+ L
Sbjct: 2545 IVNSSLVMPSGLTLDYEEDLLYWVDASLQRIERSTLTGVDREVIVNAAV-HAFGLTL--- 2600
Query: 203 PGTRWLFWTDWGENPRIERIG-MDGSNRSTIISTKIYWPNGLTLDIATRR 251
++++WTD RI R DGS + + + + P G+ + ++
Sbjct: 2601 -YGQYIYWTDL-YTQRIYRANKYDGSGQIAMTTNLLSQPRGINTVVKNQK 2648
>sp|Q04833|LRP_CAEEL Low-density lipoprotein receptor-related protein OS=Caenorhabditis
elegans GN=lrp-1 PE=1 SV=1
Length = 4753
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/299 (41%), Positives = 160/299 (53%), Gaps = 43/299 (14%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ L ++CDGKT CP G DEG C C CS CH +P G +C+CP GE L N
Sbjct: 1373 CIPLHQLCDGKTHCPGGTDEGGRCARDLCSADRAGCSFKCHNSPNGPICSCPFGEQLVN- 1431
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK-AINHSAAFLIISNR 123
C+ NEC CSQ C + K + CSC+EGY L+ D TCK A N + +SNR
Sbjct: 1432 KTKCEPENECLDSSSCSQRCKDEKHGFTCSCDEGYELDVDKRTCKVADNVKDTRIYVSNR 1491
Query: 124 HSILVAD--------------------------------------LEEKGKDHRAQDIVV 145
+ I +D L A +
Sbjct: 1492 NRIYYSDHKLDNWHTFGAIVENAIALAWDSLTDRIYWSDIREKKILSANRNGTNATVFIA 1551
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPG 204
GLD+ EG+A DW+G ++YW+DS LN IEV + E+ R +L N++QPRG+ +DP G
Sbjct: 1552 DGLDITEGIALDWVGRNLYWVDSSLNTIEVANLEDPKQRTLLVHQNVSQPRGIAVDPRKG 1611
Query: 205 TRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+FWTDWG+NP IER MDG++R I+ TKIYWPN + LD T RVYFADSKLDFID
Sbjct: 1612 V--MFWTDWGQNPCIERASMDGTDRQIIVKTKIYWPNTIALDYTTDRVYFADSKLDFID 1668
Score = 138 bits (348), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 180/428 (42%), Gaps = 123/428 (28%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGL---CSNTCHPTPLGALCTCPPGEI 60
C++ K+CDG DC +GADE +C C CHP+P G CTCP G
Sbjct: 274 HCIDQLKLCDGSKDCADGADE------QQCSQNLCPSLGCQAGCHPSPHGGECTCPSGYK 327
Query: 61 LSND-SVTCQDMNECEQPGYCSQMCTNTKGSYICSC-NEGYVLEY------DNHT----C 108
L + TC D+NEC + GYC Q+C N + + CSC + + L+ DN T C
Sbjct: 328 LDDRFHRTCSDINECAEFGYCDQLCANHRPGFTCSCLGDCFTLQMEHGPGKDNLTMRGYC 387
Query: 109 KAINHSAAFLIISNR-------------------------------------------HS 125
+ N L ++ R HS
Sbjct: 388 VSNNADKMKLFVARREGLYRLNPKNPDEEVKKLASGEFIYGIDFDYGDRKIFWTDRLAHS 447
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
AD++++G+ + + + + L LA DWI +Y ++S RI+V +G R V
Sbjct: 448 AFSADVDDEGEISQIKKLSLKSLVYPRCLAVDWITNTLYIIESGSRRIDVSSYDGERRTV 507
Query: 186 LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
L D +T P + LDP G +F+T+ ++E MDG+NR T+++T + +G+ +
Sbjct: 508 LLADGLTLPLDIALDPLRGE--MFFTN---QLKLEAAAMDGTNRRTLVNTHTHQVSGIVV 562
Query: 246 DIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305
DI +RVY+ D K+D ++ +++Y R++ + +G N VP G A D
Sbjct: 563 DITAKRVYWVDPKVDRLE--------SIDYQGNDRRI--VAQGMNVVPHPFGLALFD--- 609
Query: 306 ASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE--NPRIERIGMDGSNRSTII 363
++L+WTDW ++E+ G D
Sbjct: 610 ------------------------------QYLYWTDWTRLGVIQVEKFGSD-------- 631
Query: 364 STKIYWPN 371
TK+ W N
Sbjct: 632 -TKLLWSN 638
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 142/311 (45%), Gaps = 54/311 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++ KVCD DC + +DE C + EC + LC C +G C C G I
Sbjct: 3198 ECIDDAKVCDRNFDCTDRSDESSLCFIDECSLAEKPLCEQKCMDMKIGYKCDCFEGFAID 3257
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN-HSAAFLI 119
+D +C ++NEC E CSQ C + GSY C C +GY L D+H+CK F +
Sbjct: 3258 ISDQKSCHNVNECYEGISGCSQKCDDKIGSYKCGCVDGYQLSSDDHSCKRTEMEPEPFFL 3317
Query: 120 ISNRHSI----------------------LVADLEEK-------GK------DHRAQDIV 144
++N+H I L DL EK GK D D
Sbjct: 3318 LANKHYIRKISIDGNKYELAAQGFDNVVSLDIDLTEKKAYLIDQGKLRLLRVDLDEMDSP 3377
Query: 145 VSGLDLV--------EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+S + V EG+A DW+G +Y L+ + I VC+ +G L +D I QP+
Sbjct: 3378 LSSYETVLRHNVYGTEGIAVDWVGRKLYMLNRQERSIRVCELDGRFCKTLIRDRIQQPKA 3437
Query: 197 MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR-----STIISTKIYWPNGLTLDIATRR 251
+++ P G +LF+T+W P I RI +DGS + + WPN + +D + R
Sbjct: 3438 IVVHPGKG--YLFFTEWSLQPYIGRIALDGSPELQDPIFKLAEHDLGWPNAIAIDYFSDR 3495
Query: 252 VYFADSKLDFI 262
+++ D+ L+ I
Sbjct: 3496 LFWGDAHLNEI 3506
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 114/463 (24%), Positives = 171/463 (36%), Gaps = 93/463 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
+CVN T CD K DC + +DE GC E G C + C G C C
Sbjct: 4060 KCVNGTVACDRKDDCGDASDE-IGCSKHGGKTSCEAFGNNGGCKHICTDVRDGFYCHCRD 4118
Query: 58 GEILSNDSVT-CQDMNECEQPGYCSQMCTNTKGSYICSCNEGY-----VLEYDNHTCKAI 111
G S C D++EC C+Q+C NTKGSY+C C+E Y V C+A
Sbjct: 4119 GFRPDPQSPKECIDIDECAGNNTCTQLCLNTKGSYLCRCHEDYENNVVVGSMTGKDCRA- 4177
Query: 112 NHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN 171
AA ++I S++ L G + A + + G+A+D +YW+D
Sbjct: 4178 KGDAANVMIGADDSLVQLSLHGSGTNRHAAAKANDDDNDIIGIAFDPRKELMYWIDGS-- 4235
Query: 172 RIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRST 231
E R +A N + G LD +D +
Sbjct: 4236 ------ERTIYRSAIANGNQSH-EGQKLD-----------------------VDFAAMGV 4265
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+ P + +D T + FI S I+ + + R ID G
Sbjct: 4266 V-------PTAIAVDYTTGNL--------FIAAVSENIENGLVTARKKRMSEPIDNQNTG 4310
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
I DG +V+G L + AL T + ++D G + +IE
Sbjct: 4311 F---IFVCLPDGRYLKKIVAGHLQQPTAL---------ITAPSAGRICYSDAGLHAKIEC 4358
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIAT-RRVYFADSKLDFIDFCNYDGTGRQQVI---- 406
MDG++R I+ ++ P + +D R+Y+ D K +D N DG+ R V+
Sbjct: 4359 ADMDGTHRQIIVKDLVFSPTSMAIDEGKGNRIYWVDPKYRRVDAVNIDGSERTTVVHDRH 4418
Query: 407 ---LIDLMVE------------FTNDLMGDNGVPALALDLENG 434
+D+ + D G V LA DLE+G
Sbjct: 4419 IPYAVDVFENHIYWLSRESKTLYVQDKFGRGRVSVLASDLEDG 4461
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 96/192 (50%), Gaps = 18/192 (9%)
Query: 151 VEGLAYDWIGGHIYWL--DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWL 208
++ LA DWI ++Y++ D+ IEV +GT R +L P + +DP +R+L
Sbjct: 2205 IKSLAIDWINYNMYFINHDAERTNIEVSKLDGTYRKILLTTKTETPSSIAVDPV--SRYL 2262
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI------ 262
+W D G+ P I+R +DGS R I+S+ I P L +D+A++ +Y++D+K+D I
Sbjct: 2263 YWADQGQKPTIQRSFLDGSRREVIVSSGIAEPTDLVVDVASKMIYWSDAKMDGIYRVRST 2322
Query: 263 ----DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
+ +I + + + +YW D K+ +A + S+L+S A
Sbjct: 2323 GGTPELVRSDIASAAGVALHGQNMYWTDNRLE----KLFRATSKPNQTSLLLSPTTVAAS 2378
Query: 319 ALDLENGMLYYS 330
D+ + ++ S
Sbjct: 2379 LKDIGDVAVFSS 2390
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 127/335 (37%), Gaps = 55/335 (16%)
Query: 80 CSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII---SNRHSILVADLEEKG 135
CS +C N K ++ C C G L+ C I+ + FL+I +N I + EK
Sbjct: 1756 CSHLCLLNNKNTFTCKCPMGEKLDASGKKC--IDDAKPFLVIIQKTNVFGIEMNSASEKE 1813
Query: 136 KDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
A + +SGL AYD + ++ L+ + + + I + N
Sbjct: 1814 TPVLAGMVPLSGLGNAFDAAYDALSEEMFILEHTNHAKTLAQITTDSAIYRSTVNGGNKT 1873
Query: 196 GMMLDPSPGTRWLFWTDW-GEN--------PRIERIGMDGSNRSTIISTKIYWPNGLTLD 246
M P + DW G N IE I G ++I + P +
Sbjct: 1874 KMFSSAVPDDAYCLGFDWNGRNLVVGNKITQTIEIIRTQGKQYRSVILSNDQSPTAVVTP 1933
Query: 247 IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
+A + + + Y ++W+D GG K+ +A +DGSN
Sbjct: 1934 VA------------------IAVDADKGY------VFWLDRGGGAADAKVARAGLDGSNP 1969
Query: 307 SILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
++ S L E +A+D N +Y+S K RI + DG +R ++S
Sbjct: 1970 LVIASNDLAELDHIAIDTTNTRVYFSEAKAG------------RISSVTYDGQDRHYVLS 2017
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399
PNGL R+++ADS D I+ +G
Sbjct: 2018 DGGRQPNGLAF--YGDRLFYADSAFDSIEVATING 2050
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 173/454 (38%), Gaps = 107/454 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNT-CHPTPLGA----------- 51
+C+ + VCDG DC +G+DE C+ +C C N C P
Sbjct: 194 QCIQKSWVCDGSKDCADGSDEPDTCEFKKCTANEFQCKNKRCQPRKFRCDYYDDCGDNSD 253
Query: 52 --LC---TCPPGE-------------ILSNDSVTCQD---MNECEQ---PGY-CSQMCTN 86
C CPPG+ L + S C D +C Q P C C
Sbjct: 254 EDECGEYRCPPGKWNCPGTGHCIDQLKLCDGSKDCADGADEQQCSQNLCPSLGCQAGCHP 313
Query: 87 TKGSYICSCNEGYVLEYDNH-TCKAINHSAAF-----LIISNRHSILVADLEEKGKDHRA 140
+ C+C GY L+ H TC IN A F L ++R + L +
Sbjct: 314 SPHGGECTCPSGYKLDDRFHRTCSDINECAEFGYCDQLCANHRPGFTCSCLGD------- 366
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
L + G D + Y + + +++++ V ++ + + L+
Sbjct: 367 ----CFTLQMEHGPGKDNLTMRGYCVSNNADKMKL--------FVARREGLYR-----LN 409
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD---- 256
P + GE I I D +R KI+W + L + AD
Sbjct: 410 PKNPDEEVKKLASGE--FIYGIDFDYGDR------KIFWTDRLA-----HSAFSADVDDE 456
Query: 257 ---SKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
S++ + KSL + I LY I+ G +I ++ DG ++L++
Sbjct: 457 GEISQIKKLSLKSLVYPRCLAVDWITNTLYIIESGSR----RIDVSSYDGERRTVLLADG 512
Query: 314 LYEAL--ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
L L ALD G ++++ ++E MDG+NR T+++T + +
Sbjct: 513 LTLPLDIALDPLRGEMFFTN--------------QLKLEAAAMDGTNRRTLVNTHTHQVS 558
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
G+ +DI +RVY+ D K+D ++ +Y G R+ V
Sbjct: 559 GIVVDITAKRVYWVDPKVDRLESIDYQGNDRRIV 592
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 63/111 (56%), Gaps = 11/111 (9%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
+Y+I+ +++ K +DG+ IL++ + ++ ++ +R+L+W
Sbjct: 2217 MYFINHDAERTNIEVSK--LDGTYRKILLTTKTETPSSIAVD---------PVSRYLYWA 2265
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392
D G+ P I+R +DGS R I+S+ I P L +D+A++ +Y++D+K+D I
Sbjct: 2266 DQGQKPTIQRSFLDGSRREVIVSSGIAEPTDLVVDVASKMIYWSDAKMDGI 2316
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 76/187 (40%), Gaps = 47/187 (25%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
+ + DW+ IY+ R ++ D G + +A + T + +DP G LFW
Sbjct: 2531 ISDMKLDWLTQKIYFTTGRGGKVMAIDTAGEHLSTIASGDWTY--ALAIDPCSG--LLFW 2586
Query: 211 TDWGEN-------PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
+D G PRIER + G +R I+S I P + +D +++Y+AD
Sbjct: 2587 SDSGYKTSGGLYEPRIERSNLAGGSRKVIVSESISLPAAIAVDFRNQKIYWAD------- 2639
Query: 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE 323
VN L I A+ DG N ++ SG Y A +LD+
Sbjct: 2640 ---------VNR------------------LNIEVADYDGQNRKVIASG--YRAKSLDIW 2670
Query: 324 NGMLYYS 330
+ LY S
Sbjct: 2671 DRWLYMS 2677
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310
R+ F SK K + +++ + +K+Y+ G G + I A G + S +
Sbjct: 2514 RLVFGASKQPHA--KEIRHISDMKLDWLTQKIYFT-TGRGGKVMAIDTA---GEHLSTIA 2567
Query: 311 SGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN-------PRIERIGMDGSNRSTII 363
SG ALA+D C+ LFW+D G PRIER + G +R I+
Sbjct: 2568 SGDWTYALAID-----------PCSGLLFWSDSGYKTSGGLYEPRIERSNLAGGSRKVIV 2616
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
S I P + +D +++Y+AD I+ +YDG R+ +
Sbjct: 2617 SESISLPAAIAVDFRNQKIYWADVNRLNIEVADYDGQNRKVI 2658
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 9/141 (6%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI----VLAKDNITQ-- 193
A ++V+ D + +++DWI +Y++D+ N +EV T + ++ + IT+
Sbjct: 788 AAPVLVTHNDGLFSMSFDWISKQLYYVDNIRNSLEVVKIGETGLVHPDELVRRQLITELR 847
Query: 194 -PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P +++ P G LF+ + I R +DG N I +T + P+ + +D A R+
Sbjct: 848 DPVSVVVHPWKG--LLFYAEAMRPAAIYRCHIDGQNCQVIRNTTLGRPSEMAIDFAENRL 905
Query: 253 YFADSKLDFIDCKSLEIKTNV 273
+ D+ L I C + K V
Sbjct: 906 CWGDTLLKTISCMDFDGKNVV 926
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWG---ENPRIERIGMDGSNRSTIISTKIYWPNGL 373
A+A+D + G ++FW D G + ++ R G+DGSN I S + + +
Sbjct: 1935 AIAVDADKG-----------YVFWLDRGGGAADAKVARAGLDGSNPLVIASNDLAELDHI 1983
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+D RVYF+++K I YDG R V+
Sbjct: 1984 AIDTTNTRVYFSEAKAGRISSVTYDGQDRHYVL 2016
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 272 NVNYSTIFRKLYWIDEGGNGVPL-KIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
++++ I ++LY++D N + + KIG+ + + LV QL L + + +
Sbjct: 801 SMSFDWISKQLYYVDNIRNSLEVVKIGETGL--VHPDELVRRQLITELRDPVSVVVHPWK 858
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 390
L LF+ + I R +DG N I +T + P+ + +D A R+ + D+ L
Sbjct: 859 GL-----LFYAEAMRPAAIYRCHIDGQNCQVIRNTTLGRPSEMAIDFAENRLCWGDTLLK 913
Query: 391 FIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYY 438
I ++DG + V+ +D+ DN +P +A+ + N +YY
Sbjct: 914 TISCMDFDG---KNVVKLDI----------DNPIP-VAITIMNEYIYY 947
Score = 37.4 bits (85), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
IV + L +A D+ IYW D IEV D +G NR V+A + R LD
Sbjct: 2615 IVSESISLPAAIAVDFRNQKIYWADVNRLNIEVADYDGQNRKVIA----SGYRAKSLD-- 2668
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 236
RWL+ +D N GS ++S +
Sbjct: 2669 IWDRWLYMSDPLSNGVFRIDKESGSGLENVVSDR 2702
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSN 42
C+ L CD K DC + +DE P C+ C + LC+N
Sbjct: 2805 CILLGATCDSKPDCADASDENPNYCNTRSCPEDYNLCTN 2843
>sp|Q91ZX7|LRP1_MOUSE Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus
GN=Lrp1 PE=1 SV=1
Length = 4545
Score = 206 bits (524), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 200/421 (47%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC +G+DE GC + EC K CS C +G C C PG L
Sbjct: 2917 RCVAEALLCNGQDDCGDGSDER-GCHVNECLSRKLSGCSQDCEDLKIGFKCRCRPGFRLK 2975
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ+C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2976 DDGRTCADLDECSTTFPCSQLCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 3035
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 3036 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 3095
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3096 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3155
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS RS I+ TKI WPNGLT+D T R+Y+AD++ D+
Sbjct: 3156 QNG--YLYWTDWGDHSLIGRIGMDGSGRSIIVDTKITWPNGLTVDYVTERIYWADAREDY 3213
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3214 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3239
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 3240 LFEDYVY-----------WTDW-ETKSINRAHKTTGANKTLLIST-LHRPMDLHVFHALR 3286
Query: 381 R 381
+
Sbjct: 3287 Q 3287
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 162/318 (50%), Gaps = 55/318 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV ++++C+G DC +G+DEG C C + C PTP G C C L D
Sbjct: 86 CVPMSRLCNGIQDCMDGSDEGAHCRELRANCSRMGCQHHCVPTPSGPTCYCNSSFQLQAD 145
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLIIS 121
TC+D +EC G CSQ+CTNT GS+ C C EGY+L+ DN +CKA N L+I+
Sbjct: 146 GKTCKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPVLLIA 205
Query: 122 NRHSIL------------------------------------VADLEEKGK--------- 136
N +IL V D + +
Sbjct: 206 NSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDSAAQTQLKCARMPGL 265
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
D +I +S L VE +A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 266 KGFVDEHTINISLS-LHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELY 324
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R V
Sbjct: 325 NPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLV 382
Query: 253 YFADSKLDFIDCKSLEIK 270
Y+AD+ LD+I+ E K
Sbjct: 383 YWADAYLDYIEVVDYEGK 400
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 157/304 (51%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDGK DC +G+DEG CD +C G CS+ C P G +C+CP G L +
Sbjct: 1160 CLPPDKLCDGKDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGS 1217
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1218 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1277
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1278 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1337
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1338 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1397
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R TI + WPNGLT+D +R+ + D++
Sbjct: 1398 RDGI--LFWTDWDASLPRIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDAR 1455
Query: 259 LDFI 262
D I
Sbjct: 1456 SDAI 1459
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 168/431 (38%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1856 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1912
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1913 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1972
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG
Sbjct: 1973 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGH 2030
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D+++D I+ LE N
Sbjct: 2031 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQGGKLYWCDARMDKIERIDLETGENREV 2090
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2091 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGCKDNATDSVPLRTGIGVQLKDIKVFN 2150
Query: 298 KANMDGSNASILVSGQLYE--------ALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G + A +GML C + + + E +
Sbjct: 2151 RDRQKGTNVCAVANGGCQQLCLYRGGGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 2210
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2211 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2269
Query: 396 NYDGTGRQQVI 406
N DG+GR ++
Sbjct: 2270 NDDGSGRTTIV 2280
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 127/261 (48%), Gaps = 35/261 (13%)
Query: 26 PGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ----------DMNEC 74
PGC D+ EC +FG CS C+ T G LC+C + ++++ + D NE
Sbjct: 3821 PGCQDINECL-RFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIADDNEI 3879
Query: 75 EQ--PGYCSQMCTNT-KG-------SYICSCNEGYVLEYDNHTCKAINHS---AAFLIIS 121
PG+ T +G + G V + HT S AA S
Sbjct: 3880 RSLFPGHPHSAYEQTFQGDESVRIDAMDVHVKAGRVYWTNWHTGTISYRSLPPAAPPTTS 3939
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
NRH + ++G H + +SGL + G+A DW+ G++YW DS + IEV G
Sbjct: 3940 NRHRRQI----DRGVTH----LNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEVAQMKGE 3991
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++ I WP
Sbjct: 3992 NRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQDNIQWPT 4049
Query: 242 GLTLDIATRRVYFADSKLDFI 262
GL +D R+Y+AD+KL I
Sbjct: 4050 GLAVDYHNERLYWADAKLSVI 4070
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 163/405 (40%), Gaps = 88/405 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSNT--CHPTPLGALCTCPP 57
RC++ + C+ DC +G+DE C L C +C + C T A C C
Sbjct: 3754 RCLSSSLRCNMFDDCGDGSDE-EDCSIDPKLTSCATNASMCGDEARCVRTEKAAYCACRS 3812
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G CQD+NEC + G CSQ+C NTKG ++CSC ++ ++ TCKA
Sbjct: 3813 GFHTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHN--TCKAEGSEYQV 3870
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L I++ + I G H A + G + V R++ ++V
Sbjct: 3871 LYIADDNEIRSL---FPGHPHSAYEQTFQGDESV-----------------RIDAMDVHV 3910
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ G ++WT+W + IS +
Sbjct: 3911 KAGR--------------------------VYWTNW---------------HTGTISYRS 3929
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P + R D + ++ L++ + + +YW D G + + +
Sbjct: 3930 L-PPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEV--- 3985
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A M G N L+SG + E A+ +D G +Y W+DWG +P+IE MD
Sbjct: 3986 -AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMD 4033
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
G+ R T++ I WP GL +D R+Y+AD+KL I +GT
Sbjct: 4034 GTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT 4078
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 486 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 544
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 545 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 604
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 605 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 662
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 663 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 722
Query: 261 FID 263
I+
Sbjct: 723 RIE 725
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 16/137 (11%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 295 FYFVDD----IDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAMGK---------VFFT 341
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 342 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 401
Query: 402 RQ---QVILIDLMVEFT 415
RQ Q ILI+ + T
Sbjct: 402 RQTIIQGILIEHLYGLT 418
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 130/328 (39%), Gaps = 59/328 (17%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS +C N + C+C L DN TC FL+ + + I DL+
Sbjct: 1548 GPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYEFK---KFLLYARQMEIRGVDLDAPYY 1604
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
++ V +D V L YD +YW D R I+ NGT + ++ G
Sbjct: 1605 NYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHG 1663
Query: 197 MMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1664 LAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV---------- 1710
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+ KLYW D G N I ANMDGSN ++L SGQ
Sbjct: 1711 --------------------HPLRGKLYWTD-GDN-----ISMANMDGSNHTLLFSGQKG 1744
Query: 316 E-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
LA+D LY W G N I R +DGS I + +
Sbjct: 1745 PVGLAIDFPESKLY-----------WISSG-NHTINRCNLDGSELEVIDTMRSQLGKATA 1792
Query: 375 LDIATRRVYFADSKLDFIDFCN-YDGTG 401
L I ++++AD + + CN DG+G
Sbjct: 1793 LAIMGDKLWWADQVSEKMGTCNKADGSG 1820
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2342 ECQNLMFWTNWNELHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2401
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2402 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2432
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 2261 IHFGNIQQINDDGSGRTTIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGA 2320
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2321 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNELHPSIMRAALSGANVLTLIEKDIR 2378
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2379 TPNGLAIDHRAEKLYFSDATLDKIE 2403
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3042 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 3091
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3092 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3149
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3150 ---------ALVVDVQNGYLYWTDWGDHSL 3170
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 21/176 (11%)
Query: 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295
++YW + T A +R + + ++ + L + + R L+W N +
Sbjct: 1629 RVYWSDVRTQ--AIKRAFINGTGVETVVSADLPNAHGLAVDWVSRNLFWTSYDTNKKQIN 1686
Query: 296 IGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
+ A +DGS + +V G L+ +G++ + L+WTD G+N I MD
Sbjct: 1687 V--ARLDGSFKNAVVQG-------LEQPHGLVVHPLRG---KLYWTD-GDN--ISMANMD 1731
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
GSN + + S + P GL +D ++Y+ S I+ CN DG+ ++ +ID M
Sbjct: 1732 GSNHTLLFSGQ-KGPVGLAIDFPESKLYWISSGNHTINRCNLDGS---ELEVIDTM 1783
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2382 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 2437
Query: 213 W 213
W
Sbjct: 2438 W 2438
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1279 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1328
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1329 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1379
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1380 ---TTLLAGDIEHPRAIALDPRDGILFWT 1405
Score = 40.0 bits (92), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 680 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 739
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIER--------IGMDGSNRSTIISTKI 237
+ G+ + +LFWT++ G R+ER + + S R I ++
Sbjct: 740 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLERGVAGAPPTVTLLRSERPPIFEIRM 795
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
Y D ++V +++ C SL + T
Sbjct: 796 Y-------DAQQQQVGTNKCRVNNGGCSSLCLAT 822
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 14/128 (10%)
Query: 123 RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYW-----LDSRLNRIEVCD 177
RH++ D G R I +SG D D ++W L + R +
Sbjct: 2310 RHTV---DQTRPGAFERETVITMSGDDHPRAFVLDECQNLMFWTNWNELHPSIMRAAL-- 2364
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+G N + L + +I P G+ +D L+++D + +IER DGS+R I+ ++
Sbjct: 2365 -SGANVLTLIEKDIRTPNGLAIDHR--AEKLYFSDATLD-KIERCEYDGSHRYVILKSEP 2420
Query: 238 YWPNGLTL 245
P GL +
Sbjct: 2421 VHPFGLAV 2428
>sp|Q07954|LRP1_HUMAN Prolow-density lipoprotein receptor-related protein 1 OS=Homo sapiens
GN=LRP1 PE=1 SV=2
Length = 4544
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 199/421 (47%), Gaps = 93/421 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RCV +C+G+ DC + +DE GC + EC K CS C +G C C PG L
Sbjct: 2916 RCVAEALLCNGQDDCGDSSDER-GCHINECLSRKLSGCSQDCEDLKIGFKCRCRPGFRLK 2974
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLE-YDNHTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GSY C C EGY D H+CKA+ FLI +
Sbjct: 2975 DDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFA 3034
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 3035 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQ 3094
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3095 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDV 3154
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I RIGMDGS+RS I+ TKI WPNGLTLD T R+Y+AD++ D+
Sbjct: 3155 QNG--YLYWTDWGDHSLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDY 3212
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN +++S + AL
Sbjct: 3213 IE----------------------------------FASLDGSNRHVVLSQDIPHIFALT 3238
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIISTKIYWPNGLTLDIATR 380
L +Y WTDW E I R G+N++ +IST ++ P L + A R
Sbjct: 3239 LFEDYVY-----------WTDW-ETKSINRAHKTTGTNKTLLIST-LHRPMDLHVFHALR 3285
Query: 381 R 381
+
Sbjct: 3286 Q 3286
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 164/318 (51%), Gaps = 55/318 (17%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV ++++C+G DC +G+DEGP C + C + C PT G C C L D
Sbjct: 85 CVPMSRLCNGVQDCMDGSDEGPHCRELQGNCSRLGCQHHCVPTLDGPTCYCNSSFQLQAD 144
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLIIS 121
TC+D +EC G CSQ+CTNT GS+IC C EGY+L+ DN +CKA N L+I+
Sbjct: 145 GKTCKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPVDRPPVLLIA 204
Query: 122 NRHSIL------------------------------------VADLEEKGK--------- 136
N +IL V D + +
Sbjct: 205 NSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANETVCWVHVGDSAAQTQLKCARMPGL 264
Query: 137 ----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
D +I +S L VE +A DW+ G+ Y++D +RI VC+ NG + L +
Sbjct: 265 KGFVDEHTINISLS-LHHVEQMAIDWLTGNFYFVDDIDDRIFVCNRNGDTCVTLLDLELY 323
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R V
Sbjct: 324 NPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLV 381
Query: 253 YFADSKLDFIDCKSLEIK 270
Y+AD+ LD+I+ E K
Sbjct: 382 YWADAYLDYIEVVDYEGK 399
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 155/304 (50%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1159 CLPPDKLCDGNDDCGDGSDEGELCD--QCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGP 1216
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K S CSC EG+VLE D +C++++ F+I SNR
Sbjct: 1217 DNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNR 1276
Query: 124 HSILVADLEE------------------------------------KGK--DHRA----Q 141
H I DL + +GK D+ A +
Sbjct: 1277 HEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLLDNGALTSFE 1336
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1337 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDP 1396
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R T+ + WPNGLT+D +R+ + D++
Sbjct: 1397 RDGI--LFWTDWDASLPRIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDAR 1454
Query: 259 LDFI 262
D I
Sbjct: 1455 SDAI 1458
Score = 118 bits (296), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 167/431 (38%), Gaps = 108/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + + C C GY L C+ + +FL+ S I L+ K
Sbjct: 1855 GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGV---GSFLLYSVHEGIRGIPLDPNDK 1911
Query: 137 D----------------------------------HRA-------QDIVVSGLDLVEGLA 155
RA +D+V +G+ VEG+A
Sbjct: 1912 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1971
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1972 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2029
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 2030 YPRIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGENREV 2089
Query: 273 ---------VNYSTIFRKLYWIDE--------------GGNGVPLKIG------------ 297
+ S +YW D + VPL+ G
Sbjct: 2090 VLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFN 2149
Query: 298 KANMDGSNASILVSGQLYE--------ALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ G+N + +G + A +GML C + + + E +
Sbjct: 2150 RDRQKGTNVCAVANGGCQQLCLYRGRGQRACACAHGMLAEDGASCREYAGYLLYSERTIL 2209
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G T R++F+D I
Sbjct: 2210 KSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAG-TSPGTPNRIFFSDIHFGNIQQI 2268
Query: 396 NYDGTGRQQVI 406
N DG+ R ++
Sbjct: 2269 NDDGSRRITIV 2279
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 126/261 (48%), Gaps = 35/261 (13%)
Query: 26 PGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ----------DMNEC 74
PGC D+ EC +FG CS C+ T G LC+C + ++++ + D NE
Sbjct: 3820 PGCQDINECL-RFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIADDNEI 3878
Query: 75 EQ--PGYC----SQMCTNTKGSYI----CSCNEGYVLEYDNHTCKAINHS---AAFLIIS 121
PG+ Q + I G V + HT S AA S
Sbjct: 3879 RSLFPGHPHSAYEQAFQGDESVRIDAMDVHVKAGRVYWTNWHTGTISYRSLPPAAPPTTS 3938
Query: 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT 181
NRH + ++G H + +SGL + G+A DW+ G++YW DS + IEV G
Sbjct: 3939 NRHRRQI----DRGVTH----LNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEVAQMKGE 3990
Query: 182 NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++ I WP
Sbjct: 3991 NRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQDNIQWPT 4048
Query: 242 GLTLDIATRRVYFADSKLDFI 262
GL +D R+Y+AD+KL I
Sbjct: 4049 GLAVDYHNERLYWADAKLSVI 4069
Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 163/405 (40%), Gaps = 88/405 (21%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCD----LAECKHKFGLCSNT--CHPTPLGALCTCPP 57
RC++ + C+ DC +G+DE C L C +C + C T A C C
Sbjct: 3753 RCLSSSLRCNMFDDCGDGSDE-EDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRS 3811
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G CQD+NEC + G CSQ+C NTKG ++CSC ++ ++ TCKA
Sbjct: 3812 GFHTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHN--TCKAEGSEYQV 3869
Query: 118 LIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCD 177
L I++ + I G H A + G + V R++ ++V
Sbjct: 3870 LYIADDNEIRSL---FPGHPHSAYEQAFQGDESV-----------------RIDAMDVHV 3909
Query: 178 ENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 237
+ G ++WT+W + IS +
Sbjct: 3910 KAGR--------------------------VYWTNW---------------HTGTISYRS 3928
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P + R D + ++ L++ + + +YW D G + + +
Sbjct: 3929 L-PPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRGIAIDWVAGNVYWTDSGRDVIEV--- 3984
Query: 298 KANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A M G N L+SG + E A+ +D G +Y W+DWG +P+IE MD
Sbjct: 3985 -AQMKGENRKTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMD 4032
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
G+ R T++ I WP GL +D R+Y+AD+KL I +GT
Sbjct: 4033 GTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT 4077
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 58/243 (23%)
Query: 76 QPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ + C C G+ L D +CK H FL+
Sbjct: 485 KPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 543
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 544 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 603
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 604 VEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 661
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P R+ER MDGS+R +++K + WPNGL+LDI R+Y+ D+ D
Sbjct: 662 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 721
Query: 261 FID 263
I+
Sbjct: 722 RIE 724
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 16/137 (11%)
Query: 282 LYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWT 341
Y++D+ + +I N +G L+ +LY + L+ M +F+T
Sbjct: 294 FYFVDD----IDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAMGK---------VFFT 340
Query: 342 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401
D+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R VY+AD+ LD+I+ +Y+G G
Sbjct: 341 DYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKG 400
Query: 402 RQ---QVILIDLMVEFT 415
RQ Q ILI+ + T
Sbjct: 401 RQTIIQGILIEHLYGLT 417
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 141/362 (38%), Gaps = 66/362 (18%)
Query: 72 NECEQ---PGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL 127
N CE G CS +C N + C+C L DN TC FL+ + + I
Sbjct: 1538 NPCEANGGQGPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYEFK---KFLLYARQMEIR 1594
Query: 128 VADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
DL+ ++ V +D V L YD +YW D R I+ NGT +
Sbjct: 1595 GVDLDAPYYNYIIS-FTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVV 1653
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLD 246
++ G+ +D +R LFWT + N + I +DGS ++ ++ + P+GL +
Sbjct: 1654 SADLPNAHGLAVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVVQ-GLEQPHGLVV- 1709
Query: 247 IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
+ KLYW D G N I ANMDGSN
Sbjct: 1710 -----------------------------HPLRGKLYWTD-GDN-----ISMANMDGSNR 1734
Query: 307 SILVSGQLYE-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
++L SGQ LA+D LY W G N I R +DGS I +
Sbjct: 1735 TLLFSGQKGPVGLAIDFPESKLY-----------WISSG-NHTINRCNLDGSGLEVIDAM 1782
Query: 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCN-YDGTG----RQQVILIDLMVEFTNDLMG 420
+ L I ++++AD + + C+ DG+G R L+ M + +
Sbjct: 1783 RSQLGKATALAIMGDKLWWADQVSEKMGTCSKADGSGSVVLRNSTTLVMHMKVYDESIQL 1842
Query: 421 DN 422
D+
Sbjct: 1843 DH 1844
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N T+I I PNGL +D ++YF+D+ LD
Sbjct: 2341 ECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDK 2400
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
I+ C YDG+ R ++ + + F + G++
Sbjct: 2401 IERCEYDGSHRYVILKSEPVHPFGLAVYGEH 2431
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV 185
I ++++ D + +V + VEGLAY +YW + I + T
Sbjct: 2260 IHFGNIQQINDDGSRRITIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGA 2319
Query: 186 LAKDNIT------QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIY 238
++ + PR +LD +FWT+W E +P I R + G+N T+I I
Sbjct: 2320 FERETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIR 2377
Query: 239 WPNGLTLDIATRRVYFADSKLDFID 263
PNGL +D ++YF+D+ LD I+
Sbjct: 2378 TPNGLAIDHRAEKLYFSDATLDKIE 2402
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3041 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHLNG 3090
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R ++ L
Sbjct: 3091 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPR-- 3148
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
AL +D++NG LY++ G L
Sbjct: 3149 ---------ALVVDVQNGYLYWTDWGDHSL 3169
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA D +Y+ D+ L++IE C+ +G++R V+ K P G+ + +FWTD
Sbjct: 2381 GLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVILKSEPVHPFGLAV----YGEHIFWTD 2436
Query: 213 W 213
W
Sbjct: 2437 W 2437
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S L +WTD E+ +
Sbjct: 1278 EIRRIDLHKGDYSVLVPG-LRNTIALDFH---LSQSAL------YWTDVVEDKIYRGKLL 1327
Query: 355 DG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
D ++ +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1328 DNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLR--------- 1378
Query: 412 VEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD +G+L+++
Sbjct: 1379 ---TTLLAGDIEHPRAIALDPRDGILFWT 1404
Score = 39.7 bits (91), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 26/155 (16%)
Query: 131 LEEKGKDHRAQDIVVSGLDLV--EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLA 187
LE D +DI V+ ++ GL+ D G +YW+D+ +RIE NGT+R IV
Sbjct: 679 LERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYE 738
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDW--GENPRIERIGMDG---------SNRSTIISTK 236
+ G+ + +LFWT++ G R+ER G+ G S R I +
Sbjct: 739 GPELNHAFGLCHHGN----YLFWTEYRSGSVYRLER-GVGGAPPTVTLLRSERPPIFEIR 793
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271
+Y D ++V +++ C SL + T
Sbjct: 794 MY-------DAQQQQVGTNKCRVNNGGCSSLCLAT 821
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 8/125 (6%)
Query: 123 RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD--SRLNRIEVCDENG 180
RH++ D G R I +SG D D ++W + + I +G
Sbjct: 2309 RHTV---DQTRPGAFERETVITMSGDDHPRAFVLDECQNLMFWTNWNEQHPSIMRAALSG 2365
Query: 181 TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 240
N + L + +I P G+ +D L+++D + +IER DGS+R I+ ++ P
Sbjct: 2366 ANVLTLIEKDIRTPNGLAIDHR--AEKLYFSDATLD-KIERCEYDGSHRYVILKSEPVHP 2422
Query: 241 NGLTL 245
GL +
Sbjct: 2423 FGLAV 2427
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSN 42
C+N + CDG C + +DE P C+ CK F CSN
Sbjct: 2537 CINFSLTCDGVPHCKDKSDEKPSYCNSRRCKKTFRQCSN 2575
>sp|O75096|LRP4_HUMAN Low-density lipoprotein receptor-related protein 4 OS=Homo sapiens
GN=LRP4 PE=1 SV=4
Length = 1905
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 191/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 323 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHT 382
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 383 GYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYELRPDRRSCKALG-PEPV 441
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 442 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 501
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL N+ +PR + L
Sbjct: 502 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL 561
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 562 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 619
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 620 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 645
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 646 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 689
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1312 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1371
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1372 SDHTDVHVPVPELNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1421
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1422 VIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1481
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1482 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1537
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1538 --------------------------------RIESADLNGKLRQVLVS-HVSHPFALTQ 1564
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1565 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1595
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 129/248 (52%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L +D TC PG S + +
Sbjct: 1006 CAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCS-------PGMNSFLIFARRID 1058
Query: 90 SYICSCNEGY---VLEYDNHTCKAI-------NHSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K + S H I A+L+ G H
Sbjct: 1059 IRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHRISRANLD--GSQH- 1115
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1116 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1174
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D A+ ++ +AD+
Sbjct: 1175 YHEMG--FMYWTDWGENAKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHT 1232
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1233 ERIEAADL 1240
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 48/227 (21%)
Query: 137 DHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195
D Q++VV + L+ GLA DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR
Sbjct: 803 DGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPR 862
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255
++++P G +++WTDWG +P+IER GMD S R IIS+ + WPNGL +D ++R+Y+A
Sbjct: 863 DIVVEPMGG--YMYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWA 920
Query: 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D+ + K++E A +DGS +L+ QL
Sbjct: 921 DAGM-----KTIEF-----------------------------AGLDGSKRKVLIGSQLP 946
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362
L L +Y WTDW + G +R T+
Sbjct: 947 HPFGLTLYGERIY-----------WTDWQTKSIQSADRLTGLDRETL 982
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 138/344 (40%), Gaps = 94/344 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G C+ +C + +Y C+C G+ + +H C FL+ + R I + +
Sbjct: 707 GGCTHLCLPSGQNYTCACPTGF-RKISSHACA--QSLDKFLLFARRMDIRRISFDTED-- 761
Query: 138 HRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGM 197
D V+ D+ +A DW DSR + +
Sbjct: 762 --LSDDVIPLADVRSAVALDW--------DSRDDHV------------------------ 787
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
+WTD + I R DG+ + ++ T + P GL +D T
Sbjct: 788 -----------YWTDVSTDT-ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTN------- 828
Query: 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEA 317
KLYW D G + +I AN DGS ++L+ L
Sbjct: 829 -----------------------KLYWTDAGTD----RIEVANTDGSMRTVLIWENLDRP 861
Query: 318 LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377
+ +E Y ++WTDWG +P+IER GMD S R IIS+ + WPNGL +D
Sbjct: 862 RDIVVEPMGGY---------MYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDY 912
Query: 378 ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
++R+Y+AD+ + I+F DG+ R+ +I L F L G+
Sbjct: 913 GSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQLPHPFGLTLYGE 956
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D S+ + + N ++LD + +VY
Sbjct: 1345 GKTCDPSPETYLLF----SSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVY 1400
Query: 254 FADSKLDFID-------------CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I + L+ + + R LYW D G N I +
Sbjct: 1401 YTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1456
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1457 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1507
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1508 VLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1553
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 106/222 (47%), Gaps = 44/222 (19%)
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT 244
V+ NIT + + P ++W+D RI R +DGS II+T + +GL
Sbjct: 1072 VVVPINITMKNTIAIGVDPQEGKVYWSD-STLHRISRANLDGSQHEDIITTGLQTTDGLA 1130
Query: 245 LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304
+D I RK+YW D G N +I N+DGS
Sbjct: 1131 VD------------------------------AIGRKVYWTDTGTN----RIEVGNLDGS 1156
Query: 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
+LV L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+
Sbjct: 1157 MRKVLVWQNLDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRAVLIN 1207
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ WPNGLT+D A+ ++ +AD+ + I+ + +G R ++
Sbjct: 1208 NNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLV 1249
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 139/334 (41%), Gaps = 52/334 (15%)
Query: 131 LEEKGKDHRAQDIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + +++S L GLA D+ +YW D+ + IE +G+ R VL
Sbjct: 884 IERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGS 943
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
+ P G+ L G R ++WTDW + G +R T+ N + + +
Sbjct: 944 QLPHPFGLTL---YGER-IYWTDWQTKSIQSADRLTGLDRETLQEN---LENLMDIHVFH 996
Query: 250 RRVYFADS--KLDFIDCKSLEIKT--NVNYS-TIFRKLYWIDEGGNGVP----------- 293
RR + ++ C L +++ +S T + + +G P
Sbjct: 997 RRRPPVSTPCAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCSPGMNSFLIFARR 1056
Query: 294 LKIGKANMD---GSNASILVSGQLYEALAL--DLENGMLYYSTLKCTRWLFWTDWGENPR 348
+ I ++D ++ + ++ + +A+ D + G +Y+S R
Sbjct: 1057 IDIRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHR------------ 1104
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408
I R +DGS II+T + +GL +D R+VY+ D+ + I+ N DG+ R+ ++
Sbjct: 1105 ISRANLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQ 1164
Query: 409 DLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+L + A+ L E G +Y++ G
Sbjct: 1165 NL-----------DSPRAIVLYHEMGFMYWTDWG 1187
>sp|Q8VI56|LRP4_MOUSE Low-density lipoprotein receptor-related protein 4 OS=Mus musculus
GN=Lrp4 PE=1 SV=3
Length = 1905
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 191/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 323 RCIGQRKLCNGINDCGDSSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHT 382
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTNT+G++ C C GY L D +CKA+
Sbjct: 383 GYRLTEDGRTCQDVNECAEEGYCSQGCTNTEGAFQCWCEAGYELRPDRRSCKALG-PEPV 441
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 442 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 501
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL ++ +PR + L
Sbjct: 502 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIAL 561
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 562 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 619
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 620 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 645
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 646 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 689
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1312 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDRKTCDPSPETYLLFSSRGSIRRISLDT 1371
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1372 DDHTDVHVPVPGLNNVISLDYDSVHGK-VYYTDVFLDVIRRADLNGSNMET--------- 1421
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1422 VIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1481
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1482 KG--YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLD-- 1537
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1538 --------------------------------RIESADLNGKLRQVLVS-HVSHPFALTQ 1564
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1565 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1595
Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 142/326 (43%), Gaps = 91/326 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----------- 126
G C+ +C + +Y C+C G+ + ++H C FL+ + R I
Sbjct: 707 GGCTHLCLPSGQNYTCACPTGF-RKINSHACA--QSLDKFLLFARRMDIRRISFDTEDLS 763
Query: 127 ----------------------------LVADLEEKGK-DHRAQDIVV-SGLDLVEGLAY 156
+ D + K D Q++VV + L+ GLA
Sbjct: 764 DDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAI 823
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR ++++P G +++WTDWG +
Sbjct: 824 DWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGG--YMYWTDWGAS 881
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD S+R IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 882 PKIERAGMDASSRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF------- 929
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
A +DGS +L+ QL L L +Y
Sbjct: 930 ----------------------AGLDGSKRKVLIGSQLPHPFGLTLYGQRIY-------- 959
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G +R T+
Sbjct: 960 ---WTDWQTKSIQSADRLTGLDRETL 982
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 128/248 (51%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P P G CTCP G L D TC PG S + +
Sbjct: 1006 CAVENGGCSHLCLRSPNPSGFSCTCPTGINLLRDGKTCS-------PGMNSFLIFARRID 1058
Query: 90 SYICSCNEGY---VLEYDNHTCK---AIN----HSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K AI + S H I A L+ G H
Sbjct: 1059 VRMVSLDIPYFADVVVPINMTMKNTIAIGVDPLEGKVYWSDSTLHRISRASLD--GSQH- 1115
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1116 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1174
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D + ++ +AD+
Sbjct: 1175 YHEMG--FMYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHT 1232
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1233 ERIEVADL 1240
Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 151/360 (41%), Gaps = 88/360 (24%)
Query: 111 INHSAAFLIISNRHS--ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDS 168
++ +++ L+ ++ H+ I VADL + +VS + GL + +IYW D
Sbjct: 1218 VDKTSSQLLWADAHTERIEVADLNGANRH-----TLVSPVQHPYGLTL--LDSYIYWTDW 1270
Query: 169 RLNRIEVCDENGTNRIVLAKDNI-----------TQPRGM-------------------- 197
+ I D++ + ++L + N+ QP G
Sbjct: 1271 QTRSIHRADKSTGSNVILVRSNLPGLMDIQAVDRAQPLGFNKCGSRNGGCSHLCLPRPSG 1330
Query: 198 ----------------MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
DPSP T LF I RI +D + + + N
Sbjct: 1331 FSCACPTGIQLKGDRKTCDPSPETYLLF----SSRGSIRRISLDTDDHTDVHVPVPGLNN 1386
Query: 242 GLTLDIAT--RRVYFADSKLDFI---DCKSLEIKTNVNYST----------IFRKLYWID 286
++LD + +VY+ D LD I D ++T + + + R LYW D
Sbjct: 1387 VISLDYDSVHGKVYYTDVFLDVIRRADLNGSNMETVIGHGLKTTDGLAVDWVARNLYWTD 1446
Query: 287 EGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
G N I + +DGS +L++ L E A+ + +LFWTDWG
Sbjct: 1447 TGRN----TIEASRLDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHI 1493
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IER +DGS R +I+T + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1494 AKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1553
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 136/333 (40%), Gaps = 98/333 (29%)
Query: 78 GYCSQMCTNTK--GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G CS +C + + C+C G L D TC +S FLI + R + + L+
Sbjct: 1011 GGCSHLCLRSPNPSGFSCTCPTGINLLRDGKTCSPGMNS--FLIFARRIDVRMVSLDIP- 1067
Query: 136 KDHRAQDIVVSGLDLVEGLA--YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
+ A +V + + +A D + G +YW DS L+
Sbjct: 1068 --YFADVVVPINMTMKNTIAIGVDPLEGKVYWSDSTLH---------------------- 1103
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
RI R +DGS II+T + +GL +D
Sbjct: 1104 ------------------------RISRASLDGSQHEDIITTGLQTTDGLAVD------- 1132
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
I RK+YW D G N +I N+DGS +LV
Sbjct: 1133 -----------------------AIGRKVYWTDTGTN----RIEVGNLDGSMRKVLVWQN 1165
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGL
Sbjct: 1166 LDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGL 1216
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
T+D + ++ +AD+ + I+ + +G R ++
Sbjct: 1217 TVDKTSSQLLWADAHTERIEVADLNGANRHTLV 1249
>sp|P98157|LRP1_CHICK Low-density lipoprotein receptor-related protein 1 OS=Gallus gallus
GN=LRP1 PE=2 SV=1
Length = 4543
Score = 196 bits (498), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 189/405 (46%), Gaps = 92/405 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
+C+ +CD DC +G+DE C + EC K CS C +G C C PG L
Sbjct: 2913 KCIPEALLCDNNNDCADGSDE-LNCFINECLNKKLSGCSQECEDLKIGYKCRCRPGFRLK 2971
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHT-CKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT GSY C C EGY L+ DN T CKA+ FLI +
Sbjct: 2972 DDGKTCIDIDECSTTYPCSQKCINTLGSYKCLCIEGYKLKPDNPTSCKAVTDEEPFLIFA 3031
Query: 122 NRHSILVADLEEKGK---------------DHRAQDIV---------------------- 144
NR+ + +L+ D+R Q I
Sbjct: 3032 NRYYLRKLNLDGSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHINGSNVQ 3091
Query: 145 ---VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+GL +GLA DW+GG++YW D + IEV NG R VL + +PR +++D
Sbjct: 3092 VLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVNSGLREPRALVVDV 3151
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +L+WTDWG++ I +IGMDG+NRS I+ TKI WPNGLTLD R+Y+AD++ D+
Sbjct: 3152 QNG--YLYWTDWGDHSLIGKIGMDGTNRSVIVDTKITWPNGLTLDYINSRIYWADAREDY 3209
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
I+ A++DGSN ++S + AL
Sbjct: 3210 IE----------------------------------FASLDGSNRHTVLSQDIPHIFALT 3235
Query: 322 LENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIST 365
L +Y WTDW E I R G+N++ +IST
Sbjct: 3236 LFEDYIY-----------WTDW-ETKSINRAHKTTGANKTLLIST 3268
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/331 (35%), Positives = 171/331 (51%), Gaps = 60/331 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++++K+C+G DC +G+DEGP C LA C G C + C PT G C C L+
Sbjct: 87 CIHMSKLCNGLHDCFDGSDEGPHCREQLANCT-ALG-CQHHCVPTLSGPACYCNNSFQLA 144
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA---AFLI 119
D +C+D +EC G CSQ CTNT+GSY CSC EGY+L+ DN +CKA N L+
Sbjct: 145 EDRRSCKDFDECTVYGTCSQTCTNTEGSYTCSCVEGYLLQPDNRSCKAKNEPVDRPPVLL 204
Query: 120 ISNRHSILVADLE---------EKGKDHRAQDI--------------------------- 143
I+N +IL L K A D
Sbjct: 205 IANSQNILATYLSGAPVPNITPTSAKQTTAMDFNYIEDTVCWVHVGDSASQTILKCAKIP 264
Query: 144 ------------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI 191
+ L VE +A DW+ G+ Y++D +RI VC++NG + L +
Sbjct: 265 NLKGFVEERSINISLSLHQVEQMAIDWLTGNFYFVDDIDDRIFVCNKNGLTCVTLLDLEL 324
Query: 192 TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
P+G+ LDP+ G +F+TD+G+ P++ER MDG NR+ ++ +KI +P+G+TLD+ +R
Sbjct: 325 YNPKGIALDPAMGK--VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRL 382
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
VY+AD+ LD+I+ E K N TI + +
Sbjct: 383 VYWADAYLDYIEVVDYEGK---NRHTIIQGI 410
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 149/304 (49%), Gaps = 50/304 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+CDG DC +G+DEG CD +C G CS+ C P G +C+CP G L
Sbjct: 1157 CLPPEKLCDGSDDCGDGSDEGELCD--QCSLNNGGCSHNCTVAPGEGIVCSCPLGMELGA 1214
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TCQ + C + CSQ C K + CSC EG++LE D +C++++ F+I SNR
Sbjct: 1215 DNKTCQIQSYCAKHLKCSQKCEQDKYNVKCSCYEGWMLEPDGESCRSLDPFKPFIIFSNR 1274
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1275 HEIRRIDLHRGDYSVLVPGLRNTIALDFHLNQSSLYWTDVVEDKIYRGKLLENGALTSFE 1334
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ GL EGLA DWI G+IYW++S L++IEV +GT R L +I PR + LDP
Sbjct: 1335 VVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMRTTLLAGDIEHPRAIALDP 1394
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIY--WPNGLTLDIATRRVYFADSK 258
G LFWTDW + PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 1395 RYGI--LFWTDWDASLPRIEAASMSGAGRRTIHKETGSGGWPNGLTVDYLEKRILWIDAR 1452
Query: 259 LDFI 262
D I
Sbjct: 1453 SDAI 1456
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 147/328 (44%), Gaps = 79/328 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHK---FGLCSNT--------CHPTPLGAL 52
+C++ C+ DC +G+DE C H+ + +NT C
Sbjct: 3751 KCISANLRCNFFDDCGDGSDE------KSCSHEHKSYDCMTNTTMCGDEAQCIQAQSSTY 3804
Query: 53 CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN 112
CTC G D +CQD+NEC + G CSQ+C NTKGS++CSC + + ++ DN CKA
Sbjct: 3805 CTCRRGFQKVPDKNSCQDVNECLRFGTCSQLCNNTKGSHVCSCAKNF-MKTDN-MCKAEG 3862
Query: 113 HSAAFLIISNRHSIL------------------------VADLEEKG------------- 135
L I++ + I D+ KG
Sbjct: 3863 SEHQILYIADDNKIRSMYPFNPNSAYEPAFQGDENVRIDAMDIYVKGNKIYWTNWHTGRI 3922
Query: 136 ----------------KDHRAQDIVVSGLDLV-----EGLAYDWIGGHIYWLDSRLNRIE 174
++ R D V+ L++ G+A DW+ G+IYW DS + IE
Sbjct: 3923 SYCELPASSAASTASNRNRRQIDGGVTHLNISGLKMPRGIAVDWVAGNIYWTDSGRDVIE 3982
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V G NR L I +P +++DP GT ++W+DWG +P+IE MDG+ R T++
Sbjct: 3983 VAQMKGENRKTLISGMIDEPHAIVVDPLRGT--MYWSDWGNHPKIETAAMDGTLRETLVQ 4040
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
I WP GL +D R+Y+AD+KL I
Sbjct: 4041 DNIQWPTGLAVDYHNERLYWADAKLSVI 4068
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 170/431 (39%), Gaps = 110/431 (25%)
Query: 78 GYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CSQ+C T + S C C GY L+ +C+ + +FL+ S I L+ K
Sbjct: 1851 GDCSQLCLPTSETSRSCMCTAGYSLKSGQQSCEGV---GSFLLYSVHEGIRGIPLDPNDK 1907
Query: 137 ----------------DHRAQ-------------------------DIVVSGLDLVEGLA 155
D A+ D+V +G+ VEG+A
Sbjct: 1908 SDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIA 1967
Query: 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215
DWI G+IYW D + IEV NG+ R V+ + +PR + + P G +LFWT+WG+
Sbjct: 1968 VDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKG--YLFWTEWGQ 2025
Query: 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN--- 272
PRIER +DG+ R +++ I WPNG+++D ++Y+ D++ D I+ LE N
Sbjct: 2026 YPRIERSRLDGTERMVLVNVSISWPNGISVDYEDGKLYWCDARTDKIERIDLETGENREV 2085
Query: 273 ---------VNYSTIFRKLYWID----------------------EGGNGVPLK----IG 297
+ S +YW D G GV LK
Sbjct: 2086 VLSSDNMDMFSVSVFEDYIYWSDRTHANGSIKRGSKDNATESVSLRTGIGVQLKDIKVFN 2145
Query: 298 KANMDGSNASILVSGQLYEALALD--------LENGMLYYSTLKCTRWLFWTDWGENPRI 349
+A G+N +G + +GML + C + + + E +
Sbjct: 2146 RARQKGTNVCAQNNGGCQQLCLFRGGGRRTCACAHGMLSEDGVSCRDYDGYLLYSERTIL 2205
Query: 350 ERIGM--------------DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
+ I + D + +I+ + G + R++++D I
Sbjct: 2206 KSIHLSDENNLNAPIKPFEDAEHMKNVIALAFDYRYGTK---GSNRIFYSDIHFGNIQQI 2262
Query: 396 NYDGTGRQQVI 406
N DGTGR+ ++
Sbjct: 2263 NDDGTGRRTIV 2273
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 152/382 (39%), Gaps = 123/382 (32%)
Query: 76 QPGYCSQMCT--NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------------- 119
+PG CS +C N+ S C C G+ L D +CK H FL+
Sbjct: 487 KPGGCSDICLLGNSHKSRTCRCRSGFSLGSDGKSCKKPEHEL-FLVYGKGRPGIIRGMDM 545
Query: 120 ---ISNRHSILVADL--------------------------EEKGKDHRAQDIVVSGLDL 150
+ + H I + +L +K + I+ G+
Sbjct: 546 GAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHN 605
Query: 151 VEGLAYDWIGGHIYWLDSRLNR---IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRW 207
VEG+A DW+G ++YW D + + ++ R L + +T PR +++DP G W
Sbjct: 606 VEGIAVDWMGNNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNG--W 663
Query: 208 LFWTDWGENP------RIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLD 260
++WTDW E+P +IER MDGSNR+ I++K + WPNGL+LDI + +Y+ D+ D
Sbjct: 664 MYWTDWEEDPKDSKRGKIERAWMDGSNRNVFITSKTVLWPNGLSLDIPAKILYWVDAFYD 723
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
I+ L NG KI +YE L
Sbjct: 724 RIEMVYL----------------------NGTERKI-----------------VYEGPEL 744
Query: 321 DLENGMLYYSTLKCTRWLFWTDW-------------------GENPRIERIGMDGSNRST 361
+ G+ +YS+ LFWT++ E P I I M + +
Sbjct: 745 NHAFGLCHYSSF-----LFWTEYRSGSIYRLDQSSKAVSLLRNERPPIFEIRMYDAQQQQ 799
Query: 362 IISTKIYWPNG--LTLDIATRR 381
+ S K NG +L +AT R
Sbjct: 800 VGSNKCRVNNGGCSSLCLATPR 821
Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 138/361 (38%), Gaps = 78/361 (21%)
Query: 83 MCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
C + S C+C G+ D ++C+ +N F S
Sbjct: 3795 QCIQAQSSTYCTCRRGFQKVPDKNSCQDVNECLRFGTCSQ-------------------- 3834
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE-VCDENGTNRIVLAKDNITQPRGMM-LD 200
L + G H+ + + +C G+ +L + + R M +
Sbjct: 3835 -----------LCNNTKGSHVCSCAKNFMKTDNMCKAEGSEHQILYIADDNKIRSMYPFN 3883
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA------------ 248
P+ F D EN RI+ + + + KIYW N T I+
Sbjct: 3884 PNSAYEPAFQGD--ENVRIDAMDI------YVKGNKIYWTNWHTGRISYCELPASSAAST 3935
Query: 249 --TRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
R D + ++ L++ + + +YW D G + + + A M G N
Sbjct: 3936 ASNRNRRQIDGGVTHLNISGLKMPRGIAVDWVAGNIYWTDSGRDVIEV----AQMKGENR 3991
Query: 307 SILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS 364
L+SG + E A+ +D G +Y W+DWG +P+IE MDG+ R T++
Sbjct: 3992 KTLISGMIDEPHAIVVDPLRGTMY-----------WSDWGNHPKIETAAMDGTLRETLVQ 4040
Query: 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID----LMVEFTNDLMG 420
I WP GL +D R+Y+AD+KL I +GT V+ ID L F+ D+
Sbjct: 4041 DNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT--DPVVAIDNKKGLSHPFSIDIFE 4098
Query: 421 D 421
D
Sbjct: 4099 D 4099
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 141/365 (38%), Gaps = 66/365 (18%)
Query: 72 NECEQ---PGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSIL 127
N CE G CS +C N + C+C L+ DN TC FL+ + + I
Sbjct: 1536 NPCEANGGKGPCSHLCLINYNRTLSCACPHLMKLDKDNTTCYEFK---KFLLYARQMEIR 1592
Query: 128 VADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
D++ ++ V +D V + YD + IYW D R I+ NGT +
Sbjct: 1593 GVDIDNPYYNYIIS-FTVPDIDNVTVVDYDAVEQRIYWSDVRTQTIKRAFINGTGVETVV 1651
Query: 188 KDNITQPRGMMLDPSPGTRWLFWTDWGENPR-IERIGMDGSNRSTIISTKIYWPNGLTLD 246
++ G+ +D +R LFWT + N + I +DGS ++ +I
Sbjct: 1652 SADLPNAHGLSVDWV--SRNLFWTSYDTNKKQINVARLDGSFKNAVI------------- 1696
Query: 247 IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306
+ L+ + + KLYW D G N I ANMDGSN
Sbjct: 1697 ------------------QGLDKPHCLVVHPLHGKLYWTD-GDN-----ISVANMDGSNR 1732
Query: 307 SILVSGQLYE-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365
++L + Q LA+D LY W G N I R +DGS+ I++
Sbjct: 1733 TLLFTNQRGPVGLAIDYPESKLY-----------WISSG-NGTINRCNLDGSDLEVIVAV 1780
Query: 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCN-YDGTG----RQQVILIDLMVEFTNDLMG 420
K L I ++++AD + + CN DGT R L+ LM + +
Sbjct: 1781 KSQLSKATALAIMGDKLWWADQASERMGTCNKKDGTEVTVLRNSTTLVMLMKVYDESIQQ 1840
Query: 421 DNGVP 425
P
Sbjct: 1841 AGSNP 1845
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G+N II I PNGL +D ++YF+D+ LD
Sbjct: 2335 ECQNLMFWTNWNEQHPSIMRATLSGANVLIIIDQDIRTPNGLAIDHRAEKIYFSDATLDK 2394
Query: 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
I+ C YDG+ R ++ + + F + GD
Sbjct: 2395 IERCEYDGSHRHVILKSEPVHPFGLAVYGD 2424
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 65/152 (42%), Gaps = 23/152 (15%)
Query: 126 ILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL-------------DSRLNR 172
I ++++ D + +V + VEGLAY +YW SRL
Sbjct: 2254 IHFGNIQQINDDGTGRRTIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQSRLGA 2313
Query: 173 IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRST 231
E V+ PR +LD +FWT+W E +P I R + G+N
Sbjct: 2314 FE-------RETVITMSGDDHPRAFVLDEC--QNLMFWTNWNEQHPSIMRATLSGANVLI 2364
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
II I PNGL +D ++YF+D+ LD I+
Sbjct: 2365 IIDQDIRTPNGLAIDHRAEKIYFSDATLDKIE 2396
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 22/150 (14%)
Query: 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTD-WGENPRIERIGMDG 356
K N+DGSN ++L G L A+ALD + Y + ++WTD + I R+ ++G
Sbjct: 3038 KLNLDGSNYTLLKQG-LNNAVALDFD----YREQM-----IYWTDVTTQGSMIRRMHING 3087
Query: 357 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTN 416
SN + T + P+GL +D +Y+ D D I+ +G R +L++
Sbjct: 3088 SNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYR--TVLVN------- 3138
Query: 417 DLMGDNGVPALALDLENGMLYYSTEGAEFL 446
G AL +D++NG LY++ G L
Sbjct: 3139 --SGLREPRALVVDVQNGYLYWTDWGDHSL 3166
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ + GLA D IY+ D+ L++IE C+ +G++R V+ K P G+ +
Sbjct: 2365 IIDQDIRTPNGLAIDHRAEKIYFSDATLDKIERCEYDGSHRHVILKSEPVHPFGLAV--- 2421
Query: 203 PGTRWLFWTDW 213
++FWTDW
Sbjct: 2422 -YGDYIFWTDW 2431
Score = 38.9 bits (89), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 71/150 (47%), Gaps = 28/150 (18%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
+I + ++ + S+LV G L +ALD L S+L +WTD E+ +I R +
Sbjct: 1276 EIRRIDLHRGDYSVLVPG-LRNTIALDFH---LNQSSL------YWTDVVED-KIYRGKL 1324
Query: 355 --DGSNRS--TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+G+ S +I + P GL +D +Y+ +S LD I+ DGT R
Sbjct: 1325 LENGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMR-------- 1376
Query: 411 MVEFTNDLMGDNGVP-ALALDLENGMLYYS 439
T L GD P A+ALD G+L+++
Sbjct: 1377 ----TTLLAGDIEHPRAIALDPRYGILFWT 1402
Score = 37.0 bits (84), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 8/125 (6%)
Query: 123 RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD--SRLNRIEVCDENG 180
RH++ D G R I +SG D D ++W + + I +G
Sbjct: 2303 RHTV---DQSRLGAFERETVITMSGDDHPRAFVLDECQNLMFWTNWNEQHPSIMRATLSG 2359
Query: 181 TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 240
N +++ +I P G+ +D ++++D + +IER DGS+R I+ ++ P
Sbjct: 2360 ANVLIIIDQDIRTPNGLAIDHR--AEKIYFSDATLD-KIERCEYDGSHRHVILKSEPVHP 2416
Query: 241 NGLTL 245
GL +
Sbjct: 2417 FGLAV 2421
Score = 35.8 bits (81), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ 69
+C+ G CS+ C TP G C C +IL DSVTC+
Sbjct: 804 KCRVNNGGCSSLCLATPRGRQCACAEDQILGADSVTCE 841
Score = 32.3 bits (72), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 23/50 (46%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALC 53
RC++ VCDG DC +G+DE C L C C T P LC
Sbjct: 2743 RCISKLWVCDGADDCGDGSDEDSRCRLTTCSTGSFQCPGTYVCVPERWLC 2792
>sp|Q9QYP1|LRP4_RAT Low-density lipoprotein receptor-related protein 4 OS=Rattus
norvegicus GN=Lrp4 PE=1 SV=2
Length = 1905
Score = 195 bits (495), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 191/420 (45%), Gaps = 97/420 (23%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDL------AECKHKFGLCSNTCHPTPLGALCTCPP 57
RC+ K+C+G DC + +DE P + C G C+ C CTC
Sbjct: 323 RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMIRGAVQCTCHT 382
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G L+ D TCQD+NEC + GYCSQ CTN++G++ C C GY L D +CKA+
Sbjct: 383 GYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALG-PEPV 441
Query: 118 LIISNR------------HSILVADLEEKGK---DHR----------------------- 139
L+ +NR +++L+ +LE HR
Sbjct: 442 LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 501
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+++V +GL+ GLA DW+ +YW DS +RIEV + +G +R VL ++ +PR + L
Sbjct: 502 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIAL 561
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P GT ++WTDWG PRIE MDGS R I T ++WPNGLT+D A RR+Y+ D+K
Sbjct: 562 HPMEGT--IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 619
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
I+ +AN+DGS+ ++S L A
Sbjct: 620 HVIE----------------------------------RANLDGSHRKAVISQGLPHPFA 645
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + LY WTDW G N+ II K+++P +DI T
Sbjct: 646 ITVFEDSLY-----------WTDWHTKSINSANKFTGKNQE-IIRNKLHFP----MDIHT 689
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 156/343 (45%), Gaps = 69/343 (20%)
Query: 32 ECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC----EQPGYCSQMCTNT 87
+C + G CS+ C P P G C CP G L D TC E G ++ +T
Sbjct: 1312 KCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDT 1371
Query: 88 KGSY-----ICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQD 142
+ N L+YD+ K + ++ FL + R + +++E
Sbjct: 1372 DDHTDVHVPVPGLNNVISLDYDSVDGK-VYYTDVFLDVIRRADLNGSNMET--------- 1421
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++ GL +GLA DW+ ++YW D+ N IE +G+ R VL +++ +PR + + P
Sbjct: 1422 VIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPR 1481
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +LFWTDWG +IER +DGS R +I+ + WPNGLTLD TRR+Y+ D+ LD
Sbjct: 1482 KG--YLFWTDWGHIAKIERANLDGSERKVLINADLGWPNGLTLDYDTRRIYWVDAHLD-- 1537
Query: 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322
+I A+++G +LVS + AL
Sbjct: 1538 --------------------------------RIESADLNGKLRQVLVS-HVSHPFALTQ 1564
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERI-GMDGSNRSTIIS 364
++ RW++WTDW + I+R+ G N+ T+++
Sbjct: 1565 QD-----------RWIYWTDW-QTKSIQRVDKYSGRNKETVLA 1595
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 141/326 (43%), Gaps = 91/326 (27%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI----------- 126
G C+ +C + +Y C+C G+ + ++H C FL+ + R I
Sbjct: 707 GGCTHLCLPSGQNYTCACPTGF-RKINSHACA--QSLDKFLLFARRMDIRRISFDTEDLS 763
Query: 127 ----------------------------LVADLEEKGK-DHRAQDIVV-SGLDLVEGLAY 156
+ D + K D Q +VV + L+ GLA
Sbjct: 764 DDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQKVVVDTSLESPAGLAI 823
Query: 157 DWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN 216
DW+ +YW D+ +RIEV + +G+ R VL +N+ +PR ++++P G +++WTDWG +
Sbjct: 824 DWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGG--YMYWTDWGAS 881
Query: 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276
P+IER GMD SNR IIS+ + WPNGL +D ++R+Y+AD+ + K++E
Sbjct: 882 PKIERAGMDASNRQVIISSNLTWPNGLAIDYGSQRLYWADAGM-----KTIEF------- 929
Query: 277 TIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTR 336
A +DGS +L+ QL L L +Y
Sbjct: 930 ----------------------AGLDGSKRKVLIGSQLPHPFGLTLYGQRIY-------- 959
Query: 337 WLFWTDWGENPRIERIGMDGSNRSTI 362
WTDW + G +R T+
Sbjct: 960 ---WTDWQTKSIQSADRLTGLDRETL 982
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 129/248 (52%), Gaps = 26/248 (10%)
Query: 33 CKHKFGLCSNTC--HPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK-G 89
C + G CS+ C P+P G CTCP G L D TC PG S + +
Sbjct: 1006 CAVENGGCSHLCLRSPSPSGFSCTCPTGINLLLDGKTCS-------PGMNSFLIFARRID 1058
Query: 90 SYICSCNEGY---VLEYDNHTCK---AIN----HSAAFLIISNRHSILVADLEEKGKDHR 139
+ S + Y V+ N T K AI + S H I A L+ G H
Sbjct: 1059 VRMVSLDIPYFADVVVPINMTMKNTIAIGVDPLEGKVYWSDSTLHRISRASLD--GSQH- 1115
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+DI+ +GL +GLA D IG +YW D+ NRIEV + +G+ R VL N+ PR ++L
Sbjct: 1116 -EDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVL 1174
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGLT+D + ++ +AD+
Sbjct: 1175 YHEMG--FMYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHT 1232
Query: 260 DFIDCKSL 267
+ I+ L
Sbjct: 1233 ERIEVADL 1240
Score = 102 bits (254), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 137/333 (41%), Gaps = 98/333 (29%)
Query: 78 GYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKG 135
G CS +C + + + C+C G L D TC +S FLI + R + + L+
Sbjct: 1011 GGCSHLCLRSPSPSGFSCTCPTGINLLLDGKTCSPGMNS--FLIFARRIDVRMVSLDIP- 1067
Query: 136 KDHRAQDIVVSGLDLVEGLA--YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
+ A +V + + +A D + G +YW DS L+
Sbjct: 1068 --YFADVVVPINMTMKNTIAIGVDPLEGKVYWSDSTLH---------------------- 1103
Query: 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
RI R +DGS II+T + +GL +D
Sbjct: 1104 ------------------------RISRASLDGSQHEDIITTGLQTTDGLAVD------- 1132
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
I RK+YW D G N +I N+DGS +LV
Sbjct: 1133 -----------------------AIGRKVYWTDTGTN----RIEVGNLDGSMRKVLVWQN 1165
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
L A+ L + M + ++WTDWGEN ++ER GMDGS+R+ +I+ + WPNGL
Sbjct: 1166 LDSPRAIVLYHEMGF---------MYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGL 1216
Query: 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
T+D + ++ +AD+ + I+ + +G R ++
Sbjct: 1217 TVDKTSSQLLWADAHTERIEVADLNGANRHTLV 1249
Score = 102 bits (254), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT--RRVY 253
G DPSP T LF I RI +D + + + N ++LD + +VY
Sbjct: 1345 GKTCDPSPETYLLF----SSRGSIRRISLDTDDHTDVHVPVPGLNNVISLDYDSVDGKVY 1400
Query: 254 FADSKLDFI---DCKSLEIKTNVNYST----------IFRKLYWIDEGGNGVPLKIGKAN 300
+ D LD I D ++T + + + R LYW D G N I +
Sbjct: 1401 YTDVFLDVIRRADLNGSNMETVIGHGLKTTDGLAVDWVARNLYWTDTGRN----TIEASR 1456
Query: 301 MDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360
+DGS +L++ L E A+ + +LFWTDWG +IER +DGS R
Sbjct: 1457 LDGSCRKVLINNSLDEPRAI---------AVFPRKGYLFWTDWGHIAKIERANLDGSERK 1507
Query: 361 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+I+ + WPNGLTLD TRR+Y+ D+ LD I+ + +G RQ ++
Sbjct: 1508 VLINADLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLV 1553
>sp|Q6X0I2|VGR_SOLIN Vitellogenin receptor OS=Solenopsis invicta GN=VgR PE=2 SV=1
Length = 1782
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/341 (35%), Positives = 165/341 (48%), Gaps = 58/341 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
RC++L VCD K DC +G+DEGPGC C C + CH TP G++CTC PG L
Sbjct: 180 RCISLKVVCDKKDDCGDGSDEGPGCTQFNCSS--AGCQSNCHQTPKGSVCTCKPGYKLQK 237
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC D++EC+ G C Q C N GSY C+C Y LE D TCKA A L+ S R
Sbjct: 238 DNRTCNDIDECQAYGICDQDCMNVPGSYACTCQREYYLENDKRTCKA-RAGEATLVFSTR 296
Query: 124 HSILV------------------------------ADLEEKG-------KDHRAQD---- 142
SIL ++LEE G + + Q
Sbjct: 297 TSILGMHVDSEKFFSLATNLNHAVGVAMYGDYVYWSNLEENGYNTIVKKRTYHPQAPNEV 356
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
IV +GL L+ G+ DWI +IY+ D + I VC +GT VL KD +P G+ L P+
Sbjct: 357 IVTTGLALITGIDVDWITKNIYFADEDNHCIGVCTNDGTYCTVLIKD-TDKPTGVALLPT 415
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G ++W+DWG P I GMDG N ++ K+ WP +T+D R+Y+ D+K I
Sbjct: 416 QGK--MYWSDWGTFPHIAVAGMDGKNVRIFVNVKLEWPKSVTIDYPNERLYWVDAKSKMI 473
Query: 263 DCKSLE-----------IKTNVNYSTIFRKLYWIDEGGNGV 292
+ L+ I+ + + KLYW D NG+
Sbjct: 474 ESVRLDGTDRRIVLHDIIQEPFSMTVFQNKLYWSDWESNGI 514
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 173/369 (46%), Gaps = 84/369 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
C+ +KVCDG DCP+G+DE C A + F C C+ TP GA+C C G L+ D
Sbjct: 1236 CLPYSKVCDGNRDCPDGSDETGKCQTACTVNNF--CKGMCYKTPAGAVCGCQSGYRLAVD 1293
Query: 65 SVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS--- 121
++C+D+NECE CSQMC NT GSY C C + +++ D +CKA+ + F+ ++
Sbjct: 1294 MISCEDINECEL-DICSQMCRNTIGSYECFCKDEFIIRNDKTSCKAVGPAMEFITVTDND 1352
Query: 122 ------NRHS----------ILVADLEE-----------------KGKDHRAQDIV-VSG 147
N HS + V+ L+ K + R +IV V
Sbjct: 1353 IRKMTHNLHSTTQLLFPLMGVRVSGLDVNAVSDSVYWSNDEFGTIKKLNIRTNEIVTVKI 1412
Query: 148 LDLVEGLAYDWIGGHIYWLD-SRLNRIEVCD-ENGTNRIVLAKDNITQPRGMMLDPSPGT 205
++ + LA DWI G++Y D S LN I+VC+ E G ++ + + +++D
Sbjct: 1413 VEHPQALAVDWITGNVYVNDNSHLNTIKVCNLEKGKCATLVKIQDKMKVASVIVDSI--N 1470
Query: 206 RWLFWTDW---GENP--RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
RWLFW + ++P +I R M G++ II++ + + G+T+D ++Y++D D
Sbjct: 1471 RWLFWAEISLEADHPTSKICRTDMTGADMK-IIASDLGFVRGMTIDHVKSKLYWSD---D 1526
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
F Y T + +N DGS ++++ + AL++
Sbjct: 1527 F-------------YKT------------------VESSNFDGSQRKVVLTLNMNHALSI 1555
Query: 321 DLENGMLYY 329
+ LY+
Sbjct: 1556 SIFEQSLYF 1564
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 102/463 (22%), Positives = 162/463 (34%), Gaps = 115/463 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGC-DLAECKHKF----GLCSN---------------- 42
C+ K CD DC + +DE GC C +KF G C N
Sbjct: 93 ECIPAAKYCDMVNDCLDESDEHDGCVKHLNCTNKFLCTDGHCINKEWVCDGRNDCPDGND 152
Query: 43 --TCHPTPLGALCTCPPGE---ILSND-----SVTCQDMNEC-----EQPGY-------- 79
C + +C + +N V C ++C E PG
Sbjct: 153 EWNCKANKTSSASSCKTENYQYMCANHRCISLKVVCDKKDDCGDGSDEGPGCTQFNCSSA 212
Query: 80 -CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI-------ISNRHSILVADL 131
C C T +C+C GY L+ DN TC I+ A+ I + ++
Sbjct: 213 GCQSNCHQTPKGSVCTCKPGYKLQKDNRTCNDIDECQAYGICDQDCMNVPGSYACTCQRE 272
Query: 132 EEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI 191
D R LV +G H+ + + N+
Sbjct: 273 YYLENDKRTCKARAGEATLVFSTRTSILGMHV----------------DSEKFFSLATNL 316
Query: 192 TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
G+ + +++W++ EN G N TI+ + Y P I T
Sbjct: 317 NHAVGVAM----YGDYVYWSNLEEN---------GYN--TIVKKRTYHPQAPNEVIVT-- 359
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
L + T ++ I + +Y+ DE + IG DG+ ++L+
Sbjct: 360 -------------TGLALITGIDVDWITKNIYFADEDNHC----IGVCTNDGTYCTVLIK 402
Query: 312 G-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 370
+AL G +Y W+DWG P I GMDG N ++ K+ WP
Sbjct: 403 DTDKPTGVALLPTQGKMY-----------WSDWGTFPHIAVAGMDGKNVRIFVNVKLEWP 451
Query: 371 NGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
+T+D R+Y+ D+K I+ DGT R +++L D++ E
Sbjct: 452 KSVTIDYPNERLYWVDAKSKMIESVRLDGTDR-RIVLHDIIQE 493
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 173/427 (40%), Gaps = 87/427 (20%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLA--------ECKHKFGLCSNTCHPTPLGALCT- 54
RC+ VCD DC + +DE CD + EC +F TC P +C
Sbjct: 1190 RCIPELWVCDKANDCGDNSDE-KNCDGSKRNFIESNECD-EFKCSVGTC--LPYSKVCDG 1245
Query: 55 ---CPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI 111
CP G S+++ CQ C +C MC T +C C GY L D +C+ I
Sbjct: 1246 NRDCPDG---SDETGKCQ--TACTVNNFCKGMCYKTPAGAVCGCQSGYRLAVDMISCEDI 1300
Query: 112 NHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN 171
N I S + E KD + ++ + + +G + ++ N
Sbjct: 1301 NE-CELDICSQMCRNTIGSYECFCKD----EFIIRN----DKTSCKAVGPAMEFITVTDN 1351
Query: 172 RIEVCDEN--GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
I N T +++ + R LD + + ++W++ E I+++ +
Sbjct: 1352 DIRKMTHNLHSTTQLLFP---LMGVRVSGLDVNAVSDSVYWSN-DEFGTIKKLNI---RT 1404
Query: 230 STIISTKIY-WPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
+ I++ KI P L +D T VY D N + +TI K+ +++G
Sbjct: 1405 NEIVTVKIVEHPQALAVDWITGNVYVND---------------NSHLNTI--KVCNLEKG 1447
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDW---GE 345
+KI + V+ + +++ RWLFW + +
Sbjct: 1448 KCATLVKI--------QDKMKVASVIVDSI----------------NRWLFWAEISLEAD 1483
Query: 346 NP--RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403
+P +I R M G++ II++ + + G+T+D ++Y++D ++ N+DG+ R+
Sbjct: 1484 HPTSKICRTDMTGADMK-IIASDLGFVRGMTIDHVKSKLYWSDDFYKTVESSNFDGSQRK 1542
Query: 404 QVILIDL 410
V+ +++
Sbjct: 1543 VVLTLNM 1549
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 163/452 (36%), Gaps = 101/452 (22%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGP---------GCDLAECKHKFGLC------------ 40
D C+ CDGK DCP DE CD C + +C
Sbjct: 1151 TDICLPKNVRCDGKNDCPQSDDEQNCTYCFENEFACDNKRCIPELWVCDKANDCGDNSDE 1210
Query: 41 ------------SNTCHP--------TPLGALC----TCPPGEILSNDSVTCQDMNECEQ 76
SN C P +C CP G S+++ CQ C
Sbjct: 1211 KNCDGSKRNFIESNECDEFKCSVGTCLPYSKVCDGNRDCPDG---SDETGKCQ--TACTV 1265
Query: 77 PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
+C MC T +C C GY L D +C+ IN I S + E K
Sbjct: 1266 NNFCKGMCYKTPAGAVCGCQSGYRLAVDMISCEDINE-CELDICSQMCRNTIGSYECFCK 1324
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDEN--GTNRIVLAKDNITQP 194
D + ++ + + +G + ++ N I N T +++ +
Sbjct: 1325 D----EFIIRN----DKTSCKAVGPAMEFITVTDNDIRKMTHNLHSTTQLLFP---LMGV 1373
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY-WPNGLTLDIATRRVY 253
R LD + + ++W++ E I+++ + + I++ KI P L +D T VY
Sbjct: 1374 RVSGLDVNAVSDSVYWSN-DEFGTIKKLNI---RTNEIVTVKIVEHPQALAVDWITGNVY 1429
Query: 254 FAD-SKLDFIDCKSLE-------IK-------TNVNYSTIFRKLYW--IDEGGNGVPLKI 296
D S L+ I +LE +K +V +I R L+W I + KI
Sbjct: 1430 VNDNSHLNTIKVCNLEKGKCATLVKIQDKMKVASVIVDSINRWLFWAEISLEADHPTSKI 1489
Query: 297 GKANMDGSNASILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
+ +M G++ I+ S + +D LY W+D +E D
Sbjct: 1490 CRTDMTGADMKIIASDLGFVRGMTIDHVKSKLY-----------WSD-DFYKTVESSNFD 1537
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADS 387
GS R +++ + + L++ I + +YF S
Sbjct: 1538 GSQRKVVLTLNM--NHALSISIFEQSLYFLSS 1567
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 32 ECKHKFGLCSNTCHPTPLGA-LCTCPPGEILSNDSVTCQDMNECEQPGY-CSQ 82
+C+ G CS+ C P+ + + +C CPPG LSND+ TC +EC + Y CS+
Sbjct: 889 DCQKNNGNCSHVCLPSLITSFICACPPGMELSNDNRTCISHHECSKNEYKCSE 941
Score = 33.5 bits (75), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDL-AECKHKFGLCSN 42
C+ ++CDG +CPNG DE C + CK +C N
Sbjct: 945 CIQRNQLCDGIENCPNGEDETSECRIKGRCKENQFMCKN 983
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 80 CSQMCT-NTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
CSQ+C N Y C C L D HTC+ + + LII R I
Sbjct: 558 CSQLCMLNQNKGYTCGCTLDKKLNADKHTCQDVKKNQHLLIIQGRKFI 605
>sp|P20063|LDLR_RABIT Low-density lipoprotein receptor (Fragment) OS=Oryctolagus
cuniculus GN=LDLR PE=2 SV=1
Length = 837
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/301 (35%), Positives = 160/301 (53%), Gaps = 47/301 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C++L KVC+ DC + +DE C EC G CS+TC +G C CP G L
Sbjct: 276 CISLDKVCNSARDCQDWSDEPIKECATNECMRGNGGCSHTCFDLRIGHECHCPKGYRLV- 334
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D C+D+NECE P CSQ+C N GSY C C G+ L+ + CKA++ S A+L +NR
Sbjct: 335 DQRRCEDINECEDPDICSQLCVNLAGSYKCECRAGFQLDPHSQACKAVD-SIAYLFFTNR 393
Query: 124 HSI------------LVADLE-------------------EKGKDHRAQ----------- 141
H + L+A+L+ + K + AQ
Sbjct: 394 HEVRKMTLDRSEYTSLIANLKNVVALDAEVASNRIYWSDLSQRKIYSAQIDGAHGFPAYD 453
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++ S L +GLA DWI GHIYW DS L + V D G R L + ++PR +++DP
Sbjct: 454 TVISSDLQAPDGLAVDWIHGHIYWTDSVLGTVSVADTRGFRRKTLFRQEGSKPRAIVVDP 513
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
+ G +++WTDWG +IE+ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL
Sbjct: 514 AHG--FMYWTDWGVPAKIEKGGLNGVDVYSLVTEDIQWPNGITLDLSSGRLYWVDSKLHS 571
Query: 262 I 262
I
Sbjct: 572 I 572
Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 168/448 (37%), Gaps = 103/448 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSND 64
CV+ + CDG DC +G+DE +C A TC P E +D
Sbjct: 196 CVHASWRCDGDADCRDGSDE------RDC-----------------AAATCRPDEFQCSD 232
Query: 65 SVTCQDMNECEQPGYCSQM-----CTNT---KGSYICSCNEGYVLEYDNHTCKAINHSAA 116
+C+Q C M C N +G C+ G + D K N +
Sbjct: 233 GTCIHGSRQCDQQQDCGDMSDEVGCVNVTLCEGPDKFKCHSGECISLD----KVCNSARD 288
Query: 117 FLIISNRHSILVADLE----EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNR 172
S+ A E G H + DL G G+ R
Sbjct: 289 CQDWSDEPIKECATNECMRGNGGCSH-------TCFDLRIGHECHCPKGYRLVDQRRCED 341
Query: 173 IEVCDENGTNR---IVLAKDNITQPR-GMMLDPSP-------GTRWLFWTDWGENPRIER 221
I C++ + LA + R G LDP +LF+T+ E + +
Sbjct: 342 INECEDPDICSQLCVNLAGSYKCECRAGFQLDPHSQACKAVDSIAYLFFTNRHE---VRK 398
Query: 222 IGMDGSNRSTII--------------STKIYWPNGLTLDIATRRVYFAD-------SKLD 260
+ +D S +++I S +IYW D++ R++Y A D
Sbjct: 399 MTLDRSEYTSLIANLKNVVALDAEVASNRIYWS-----DLSQRKIYSAQIDGAHGFPAYD 453
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV--SGQLYEAL 318
+ L+ + I +YW D V + A+ G L G A+
Sbjct: 454 TVISSDLQAPDGLAVDWIHGHIYWTD----SVLGTVSVADTRGFRRKTLFRQEGSKPRAI 509
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 378
+D +G +Y WTDWG +IE+ G++G + ++++ I WPNG+TLD++
Sbjct: 510 VVDPAHGFMY-----------WTDWGVPAKIEKGGLNGVDVYSLVTEDIQWPNGITLDLS 558
Query: 379 TRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ R+Y+ DSKL I + +G R+ V+
Sbjct: 559 SGRLYWVDSKLHSISSIDVNGGNRKTVL 586
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLD 200
+V + G+ D G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 542 LVTEDIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNGGNRKTVLEDEQRLAHPFSLAIF 601
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 602 EDK----VFWTD 609
>sp|Q14114|LRP8_HUMAN Low-density lipoprotein receptor-related protein 8 OS=Homo sapiens
GN=LRP8 PE=1 SV=4
Length = 963
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 154/299 (51%), Gaps = 48/299 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
CV K C+ + DCP+G+DE GC L EC H G CS+ C +G CTCP G L
Sbjct: 311 CVLAIKHCNQEQDCPDGSDEA-GCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL 369
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ P CSQ+C N KG + C C GY ++ CKA + LI +N
Sbjct: 370 -DQKTCGDIDECKDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAAGKSPSLIFTN 428
Query: 123 RHSILVADL-----------------------------------------EEKGKDHRAQ 141
RH + DL +K D + Q
Sbjct: 429 RHEVRRIDLVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMDKASDPKEQ 488
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
++++ L EGLA DW+ HIYW DS I V +G R L N+++PR + +D
Sbjct: 489 EVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRRTLFSRNLSEPRAIAVD 548
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +++W+DWG+ +IE+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 549 PLRG--FMYWSDWGDQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 605
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 174/416 (41%), Gaps = 79/416 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECK-HKFGLCSNTC--HPTPLGALCTCPPGEIL 61
CV+L CDG DC + +DE C L C+ +F TC CP G
Sbjct: 272 CVHLGWRCDGDRDCKDKSDEA-DCPLGTCRGDEFQCGDGTCVLAIKHCNQEQDCPDG--- 327
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH----SAA 116
S+++ Q +NEC G CS +CT+ K + C+C G+ L D TC I+ A
Sbjct: 328 SDEAGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGDIDECKDPDAC 386
Query: 117 FLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVC 176
I N + + D++ G + I + + + RI++
Sbjct: 387 SQICVNYKGYFKCECYPGYE----MDLLTKNCKAAAGKSPSLIFTNRH----EVRRIDLV 438
Query: 177 DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN----RSTI 232
N + I + K+ + LD T ++W D +I MD ++ + +
Sbjct: 439 KRNYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAYMDKASDPKEQEVL 491
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292
I +++ P GL +D + + +YW D G
Sbjct: 492 IDEQLHSPEGLAVDW------------------------------VHKHIYWTDSGNK-- 519
Query: 293 PLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
I A +DG L S L E A+A+D G +Y W+DWG+ +IE
Sbjct: 520 --TISVATVDGGRRRTLFSRNLSEPRAIAVDPLRGFMY-----------WSDWGDQAKIE 566
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+ G++G +R T++S I WPNG+TLD+ ++R+Y+ DSKL + ++ G R+ +I
Sbjct: 567 KSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTLI 622
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLAKDNITQPRGMM 198
Q +V ++ G+ D + +YW+DS+L+++ D +G NR ++ + D ++ P G+
Sbjct: 576 QTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTLISSTDFLSHPFGIA 635
Query: 199 LDPSPGTRWLFWTD 212
+ +FWTD
Sbjct: 636 V----FEDKVFWTD 645
>sp|Q98931|LRP8_CHICK Low-density lipoprotein receptor-related protein 8 OS=Gallus gallus
GN=LRP8 PE=1 SV=1
Length = 917
Score = 179 bits (455), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 156/304 (51%), Gaps = 47/304 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ KVCD DC + +DE C + EC G CS+ C +G C CPPG L
Sbjct: 325 ECIDGGKVCDLHRDCRDWSDEPLKECGINECSLNNGGCSHICKDLKIGYECECPPGYKLL 384
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++ECE P CSQ+C N KG Y C C EGY ++ + CKA+ S +LI +N
Sbjct: 385 -DKKTCGDIDECENPDACSQICINYKGDYKCECYEGYEMDTLSKNCKAVGKS-PYLIFTN 442
Query: 123 RHSILVADLE-----------------------------------------EKGKDHRAQ 141
RH + DL +K D Q
Sbjct: 443 RHEVRKIDLVKRDYSRIIPMLKNVVALDVEVATNRIYWCDLFYRKIYSAYIDKASDTAEQ 502
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
I++ S L+ EG+A DW+ +IYW DS I V +G+ R + ++++PR + +D
Sbjct: 503 VILIDSQLNSPEGVAIDWVHKNIYWTDSGNKTISVATADGSRRRTVFNSDLSEPRAIAVD 562
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ R+++W+DWG+ +IE+ G++G R ++S I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 563 PT--RRFMYWSDWGDKAKIEKAGLNGVGRQVLVSDNIEWPNGITLDLLNQRLYWVDSKLH 620
Query: 261 FIDC 264
+ C
Sbjct: 621 SLSC 624
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 177/449 (39%), Gaps = 83/449 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGC---DLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL 61
C++ K CD DCP+ +DE GC E KF S C G +C L
Sbjct: 285 CIHGAKQCDKVHDCPDNSDEA-GCVQESACESPSKFQCKSGEC--IDGGKVCD------L 335
Query: 62 SNDSVTCQD----------MNECE-QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110
D C+D +NEC G CS +C + K Y C C GY L D TC
Sbjct: 336 HRD---CRDWSDEPLKECGINECSLNNGGCSHICKDLKIGYECECPPGYKL-LDKKTCGD 391
Query: 111 INHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL 170
I+ S D + + + D + V Y I+ +
Sbjct: 392 IDECENPDACSQICINYKGDYKCECYEGYEMDTLSKNCKAVGKSPY-----LIFTNRHEV 446
Query: 171 NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS 230
+I++ + + I + K+ + LD T ++W D
Sbjct: 447 RKIDLVKRDYSRIIPMLKNVVA------LDVEVATNRIYWCD------------------ 482
Query: 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN 290
+ KIY +V DS+L+ + V + + +YW D G
Sbjct: 483 -LFYRKIYSAYIDKASDTAEQVILIDSQLNSPE--------GVAIDWVHKNIYWTDSGNK 533
Query: 291 GVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
+ + A DGS + + L E A+ ++ R+++W+DWG+ +IE
Sbjct: 534 TISV----ATADGSRRRTVFNSDLSEPRAIAVDPTR---------RFMYWSDWGDKAKIE 580
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI--LI 408
+ G++G R ++S I WPNG+TLD+ +R+Y+ DSKL + +++G+ R+ +I +
Sbjct: 581 KAGLNGVGRQVLVSDNIEWPNGITLDLLNQRLYWVDSKLHSLSCIDFNGSNREVLISSID 640
Query: 409 DLMVEFTNDLMGDNGVPALALDLENGMLY 437
DL F + D DLEN ++
Sbjct: 641 DLSHPFGLAVFEDR---VFWTDLENEAIF 666
>sp|Q9JI18|LRP1B_MOUSE Low-density lipoprotein receptor-related protein 1B OS=Mus musculus
GN=Lrp1b PE=2 SV=1
Length = 4599
Score = 179 bits (454), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 180/420 (42%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+G+ DCP+G+DEG CD EC G CSN C P G +C+CP G L
Sbjct: 1150 CLQPEKLCNGRKDCPDGSDEGDLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPEGHQLKK 1207
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K CSC EG+ L D +C +++ AF+I S R
Sbjct: 1208 DNRTCEIVDYCASHLRCSQVCEQQKHMVKCSCYEGWALGTDGESCTSVDSFEAFIIFSIR 1267
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1268 HEIRRIDLHKGDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAIE 1327
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 1328 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVSKLDGSLRATLIAGAMEHPRAIALDP 1387
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D RR+ + D++
Sbjct: 1388 RYGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFERRIVWTDAR 1445
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS + DG+N ++ G Y +
Sbjct: 1446 SDAI------------YSAFY----------------------DGTNMIEIIRGHEYLSH 1471
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 1472 PFAVS---LYGSE------VYWTDWRTNTLAKANKWTGQNVSVIQKTSAQPFDLQIYHPS 1522
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 148/314 (47%), Gaps = 65/314 (20%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-------PGCDLAECKHKFGLCSNTCHPTPLGALCTCPP 57
CV+L+K+C+G DCP+G DEG P C C+ K + N C C
Sbjct: 90 CVHLSKLCNGVVDCPDGFDEGGHCQELLPSCQQLNCQFKCAMVRN-------ATRCYCED 142
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH---S 114
G ++ D +C+D +EC G CSQ C NT GSY CSC EGY+++ DN +CK +
Sbjct: 143 GFEVAEDGRSCKDQDECSIYGICSQTCKNTYGSYACSCVEGYIMQSDNRSCKVKHEPTDK 202
Query: 115 AAFLIIS---------------------NRHSILVADL------------EEKGKDHRAQ 141
A L+IS NR+ I D E +
Sbjct: 203 APMLLISSLETIELFYINGSKMTTLSSANRNEIHTLDFIYSEEMICWIESRESSNQLKCG 262
Query: 142 DIVVSG-------------LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK 188
I +G VE +A+DW+ +IY++D +RI VC+ NG+ + L +
Sbjct: 263 QITKAGRLTDQRIINSLQSFQNVEQMAFDWLTRNIYFVDHVSDRIFVCNFNGSVCVTLIE 322
Query: 189 DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248
+ P+ + DP G LF+TD+G P+IER +DG NR+ I+ +K P+ L LD+
Sbjct: 323 SELHNPKAIAADPIAGK--LFFTDYGNVPKIERCDLDGMNRTRIVYSKAEQPSALALDLV 380
Query: 249 TRRVYFADSKLDFI 262
R VY+ D LD++
Sbjct: 381 NRLVYWVDLYLDYV 394
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 142/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +CD + DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 2902 RCIPSDGLCDIRDDCGDGSDE-TNCHINECLSKKISGCSQDCQDLPVSYKCKCWPGFQLK 2960
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C EGY + DN + C++++ FLI++
Sbjct: 2961 DDGKTCVDIDECSSGFPCSQQCINTYGTYKCHCAEGYETQPDNPNGCRSLSDEEPFLILA 3020
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
++H I L ++G D+R + I
Sbjct: 3021 DQHEIRKISTDGSNYTLLKQGLNNVIALDFDYREEFIYWIDSSRPNGSRINRMCLNGSDI 3080
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG VL + PR + LDP
Sbjct: 3081 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTVLVSKRLKFPRDLSLDPR 3140
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G L+W D E P I R+GMDG+N+S +I TKI P LT+D R+Y+AD
Sbjct: 3141 AGN--LYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLYWAD 3192
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 128/289 (44%), Gaps = 64/289 (22%)
Query: 69 QDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
Q N C+ G CSQ+C T + + C C GY L+ + +C+ I +FL+ S I
Sbjct: 1833 QGSNSCQVNNGGCSQLCLPTSETTRTCMCTVGYYLQKNRMSCQGIE---SFLMYSVHEGI 1889
Query: 127 LVADLEEKGK----------------DHRAQ-------------------------DIVV 145
LE + K D A+ D+V
Sbjct: 1890 RGIPLEPRDKVDALMPISGAAFAVGIDFHAENDTIYWTDMGLNKISRAKRDQTWKEDVVT 1949
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + + P G
Sbjct: 1950 NGLGRVEGIAVDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIAVHPEKG- 2008
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
+LFWT+WG+ P I + +DGS + I+S I WPNG+++D ++Y+ D++ D I+
Sbjct: 2009 -FLFWTEWGQVPCIGKARLDGSEKVMIVSVGITWPNGISIDYEENKLYWCDARSDKIE-- 2065
Query: 266 SLEIKTNVNYSTIFRK--------------LYWIDEGGNGVPLKIGKAN 300
+++ T N + +YW D ++ G N
Sbjct: 2066 RIDLDTGANREVLLSGSNVDLFSVAVFGAYIYWSDRAHANGSVRRGHKN 2114
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 88/158 (55%), Gaps = 13/158 (8%)
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL-DSRLNRI 173
A ++ ++ S L+ + G + + I+ LD VEG+A DWIG ++YW D I
Sbjct: 567 ANYIYFADTTSFLIGRQKIDGTER--ETILKDDLDNVEGIAVDWIGNNLYWTNDGHRKTI 624
Query: 174 EVC--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP------RIERIGMD 225
V ++ +R L + ++ PR +++DP G W++WTDW E+ RIE+ MD
Sbjct: 625 NVARLEKASQSRKTLLEGGMSHPRAIVVDPVNG--WMYWTDWKEDKIDDSVGRIEKAWMD 682
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
G NR +++K+ WPNGLTLD T +Y+ D+ D I+
Sbjct: 683 GVNRQVFVTSKMLWPNGLTLDFHTSTLYWCDAYYDHIE 720
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 131/330 (39%), Gaps = 80/330 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNT---------CHPTPLGALCTC 55
C+ + CD DC +G+DE GC +H C N C+ C C
Sbjct: 3774 CIPMELQCDSLDDCGDGSDE-QGCLKTPIEH---TCENNGNPCGDDAYCNQIKTSVFCRC 3829
Query: 56 PPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA 115
PG + C D+NEC G CS C NT+GSY C C++ + + N++C A
Sbjct: 3830 KPGFQRNMKGRECADLNECLLFGICSHHCLNTRGSYKCVCDQNF--QEKNNSCIAKGSED 3887
Query: 116 AFLIISNRHSIL--------------VADLEEKGK------------------------- 136
L I+N IL ++ +E +
Sbjct: 3888 QALYIANDTDILGFVYPFNYSGGHQQISHVEHNSRITGMDVHYQRNVIVWSTQFNPGGIF 3947
Query: 137 ----DHRAQDIVVSGLDLVE-----GLAYDWIGGHIYWLD-SRLN--------------R 172
D R + SGL E +A DW+ G++YW D SR++
Sbjct: 3948 YKMIDAREKRQANSGLICPEFKRPRDIAVDWVAGNVYWTDHSRMHWFSYYTTHWTSLRYS 4007
Query: 173 IEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI 232
I V NG N L + +P + ++P G ++WT G++ IE MDG+ R +
Sbjct: 4008 INVGQLNGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVIGDHSHIEEAAMDGTLRRVL 4065
Query: 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ + P GLT+D R+Y+AD +L I
Sbjct: 4066 VQKNLQRPTGLTVDHFGERIYWADFELSII 4095
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 127/339 (37%), Gaps = 99/339 (29%)
Query: 77 PGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEK 134
PG CS +C +++ + C C G+ + D +CK + R I
Sbjct: 483 PGGCSHICLLSSSYKTRTCRCRTGFNMGSDGRSCKRPKNELFLFYGKGRPGI-------- 534
Query: 135 GKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194
V G+DL +A + ++ +N+ P
Sbjct: 535 ----------VRGMDLNTKIA--------------------------DECMIPIENLVNP 558
Query: 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
R LD ++++ D + I R +DG+ R TI+ + G+ +D
Sbjct: 559 RA--LDFHAEANYIYFAD-TTSFLIGRQKIDGTERETILKDDLDNVEGIAVDW------- 608
Query: 255 ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314
I LYW ++G + + + + L+ G +
Sbjct: 609 -----------------------IGNNLYWTNDGHRKT-INVARLEKASQSRKTLLEGGM 644
Query: 315 YE--ALALDLENGMLYYSTLKCTRWLFWTDWGENP------RIERIGMDGSNRSTIISTK 366
A+ +D NG W++WTDW E+ RIE+ MDG NR +++K
Sbjct: 645 SHPRAIVVDPVNG-----------WMYWTDWKEDKIDDSVGRIEKAWMDGVNRQVFVTSK 693
Query: 367 IYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
+ WPNGLTLD T +Y+ D+ D I+ +GT R+ V
Sbjct: 694 MLWPNGLTLDFHTSTLYWCDAYYDHIEKVFLNGTHRKVV 732
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G N ++ST I PNGLT+D ++YF+D L
Sbjct: 2327 ECQNLMFWTNWNEQHPSIMRATLTGKNAHVVVSTDILTPNGLTIDHRAEKLYFSDGSLGK 2386
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 2387 IERCEYDGSQRHVIV 2401
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 128/336 (38%), Gaps = 59/336 (17%)
Query: 75 EQPGYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEE 133
E G CS +C N S C+C L D TC + FL+ + R I D++
Sbjct: 1535 EGRGPCSHLCLINHNRSAACACPHLMKLSSDKKTCYEMK---KFLLYARRSEIRGVDIDN 1591
Query: 134 KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ 193
+ V +D V + +D +YW D + I NGT + +I
Sbjct: 1592 PYVNFITA-FTVPDIDDVAVIDFDASEERLYWTDIKTQTITRAFINGTGLETVISRDIQS 1650
Query: 194 PRGMMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
RG+ +D +R L+W + + +I +DGS +++II
Sbjct: 1651 IRGLAVDWV--SRNLYWISSEFDETQINVARLDGSLKTSII------------------- 1689
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
+D C + + KLYW D GN + + ANMDGSN+ IL
Sbjct: 1690 ----HGIDKPQCLAAH--------PVRGKLYWTD--GNTINM----ANMDGSNSKILFQN 1731
Query: 313 QLYE-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
Q L++D LY W G N I R +DG N I S K
Sbjct: 1732 QKEPVGLSIDYVENKLY-----------WISSG-NGTINRCNLDGGNLEVIESMKEELTK 1779
Query: 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
L I +++++AD L + CN GR IL
Sbjct: 1780 ATALTIMDKKLWWADQNLAQLGTCN-KRDGRNPSIL 1814
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 156/436 (35%), Gaps = 103/436 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT---CPPGEIL 61
C+ L K+C+G DC + +DE C K L S C C+ C P E+
Sbjct: 3729 CLQLEKICNGINDCGDNSDE------EHCSGKLSLKSKPCKKDEF--TCSNRNCIPMELQ 3780
Query: 62 SNDSVTCQDM-------------------NECEQPGYCSQMCTNTKGSYICSCNEGYVLE 102
+ C D N C YC+Q+ K S C C G+
Sbjct: 3781 CDSLDDCGDGSDEQGCLKTPIEHTCENNGNPCGDDAYCNQI----KTSVFCRCKPGFQRN 3836
Query: 103 YDNHTCKAINHSAAFLIISNR--------HSILVADLEEK-----GKDHRAQDIVVSGLD 149
C +N F I S+ + + +EK K Q + ++
Sbjct: 3837 MKGRECADLNECLLFGICSHHCLNTRGSYKCVCDQNFQEKNNSCIAKGSEDQALYIANDT 3896
Query: 150 LVEGLAY--DWIGGHIYWLDSRLN-RIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTR 206
+ G Y ++ GGH N RI D + +++ +PG
Sbjct: 3897 DILGFVYPFNYSGGHQQISHVEHNSRITGMDVHYQRNVIVWSTQF----------NPGGI 3946
Query: 207 WLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD-SKLDFIDCK 265
+ D E + S +I + P + +D VY+ D S++ +
Sbjct: 3947 FYKMIDAREKRQAN---------SGLICPEFKRPRDIAVDWVAGNVYWTDHSRMHWFS-- 3995
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLE 323
Y+T + L + I ++G N + L++ E A+A++ +
Sbjct: 3996 --------YYTTHWTSLRY----------SINVGQLNGPNCTRLLTNMAGEPYAIAVNPK 4037
Query: 324 NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 383
GM+Y WT G++ IE MDG+ R ++ + P GLT+D R+Y
Sbjct: 4038 RGMMY-----------WTVIGDHSHIEEAAMDGTLRRVLVQKNLQRPTGLTVDHFGERIY 4086
Query: 384 FADSKLDFIDFCNYDG 399
+AD +L I YDG
Sbjct: 4087 WADFELSIIGSVLYDG 4102
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 89/240 (37%), Gaps = 54/240 (22%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRI--EVCDENGTNRI----VLAKDNITQP 194
+ ++V + VEGLAY +YW S + I D+ I V+ P
Sbjct: 2261 RQVIVENVGSVEGLAYHRAWDTLYWTSSSTSSITRHTVDQTRPGAIDREAVITMSEDDHP 2320
Query: 195 RGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 253
+ LD +FWT+W E +P I R + G N ++ST I PNGLT+D ++Y
Sbjct: 2321 HVLALDEC--QNLMFWTNWNEQHPSIMRATLTGKNAHVVVSTDILTPNGLTIDHRAEKLY 2378
Query: 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
F+D L KI + DGS ++V
Sbjct: 2379 FSDGSLG----------------------------------KIERCEYDGSQRHVIVKSG 2404
Query: 314 LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373
L+L + + ++FW+DWG + G + S + P G+
Sbjct: 2405 PGTFLSLAVYDS-----------YIFWSDWGRRAILRSNKYTGGETKILRSDIPHQPMGI 2453
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 8/119 (6%)
Query: 125 SILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI 184
SI+ A L K A +V + + GL D +Y+ D L +IE C+ +G+ R
Sbjct: 2343 SIMRATLTGKN----AHVVVSTDILTPNGLTIDHRAEKLYFSDGSLGKIERCEYDGSQRH 2398
Query: 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
V+ K G L + ++FW+DWG + G + S + P G+
Sbjct: 2399 VIVKSG----PGTFLSLAVYDSYIFWSDWGRRAILRSNKYTGGETKILRSDIPHQPMGI 2453
Score = 36.6 bits (83), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLAKDNITQPRGMML 199
Q V S + GL D+ +YW D+ + IE NGT+R +V + + P G+
Sbjct: 687 QVFVTSKMLWPNGLTLDFHTSTLYWCDAYYDHIEKVFLNGTHRKVVYSGKELNHPFGL-- 744
Query: 200 DPSPGTRWLFWTDW 213
S ++FWTD+
Sbjct: 745 --SHHGNYVFWTDY 756
>sp|Q924X6|LRP8_MOUSE Low-density lipoprotein receptor-related protein 8 OS=Mus musculus
GN=Lrp8 PE=1 SV=2
Length = 996
Score = 179 bits (453), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/298 (35%), Positives = 154/298 (51%), Gaps = 46/298 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPG-CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
CV+ KVCD + DC + +DE C L EC H G CS+ C +G CTCP G L
Sbjct: 344 CVDGGKVCDDQRDCRDWSDEPQKVCGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLL- 402
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D TC D++EC+ P CSQ+C N KG + C C+ GY ++ CKA+ + LI +NR
Sbjct: 403 DQKTCGDIDECQDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAVAGKSPSLIFTNR 462
Query: 124 HSILVADLEEKG--------KDHRAQDIVVS----------------------------- 146
H + DL ++ K+ A D+ V+
Sbjct: 463 HEVRRIDLVKRDYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAHMDKASIPDEQV 522
Query: 147 -----GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
L EGLA DW+ HIYW DS I V +G R L +++PR + +DP
Sbjct: 523 VLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATTDGRRRCTLFSRELSEPRAIAVDP 582
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
G +++W+DWG +IE+ G++G++R T++S I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 583 LRG--FMYWSDWGFQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKL 638
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 176/427 (41%), Gaps = 97/427 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCT---CPPGEIL 61
CV K C+ + DCP+G+DE GC L +TC P C C G +
Sbjct: 303 CVLAIKRCNQERDCPDGSDEA-GC----------LQESTCE-GPRRFQCKSGECVDGGKV 350
Query: 62 SNDSVTCQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110
+D C+D +NEC G CS +CT+ K + C+C G+ L D TC
Sbjct: 351 CDDQRDCRDWSDEPQKVCGLNECLHNNGGCSHICTDLKIGFECTCPAGFQL-LDQKTCGD 409
Query: 111 INH----SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
I+ A I N + + D + V G + I + +
Sbjct: 410 IDECQDPDACSQICVNYKGYFKCECHPGYE----MDTLTKNCKAVAGKSPSLIFTNRH-- 463
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226
+ RI++ + + I + K+ + LD T ++W D +I MD
Sbjct: 464 --EVRRIDLVKRDYSRLIPMLKNVVA------LDVEVATNRIYWCDLSYR-KIYSAHMDK 514
Query: 227 SN----RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKL 282
++ + +I +++ P GL +D + + +
Sbjct: 515 ASIPDEQVVLIDEQLHSPEGLAVDW------------------------------VHKHI 544
Query: 283 YWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFW 340
YW D G I A DG L S +L E A+A+D G +Y W
Sbjct: 545 YWTDSGNK----TISVATTDGRRRCTLFSRELSEPRAIAVDPLRGFMY-----------W 589
Query: 341 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGT 400
+DWG +IE+ G++G++R T++S I WPNG+TLD+ ++R+Y+ DSKL + +++G
Sbjct: 590 SDWGFQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFNGG 649
Query: 401 GRQQVIL 407
R+ +I
Sbjct: 650 NRKMLIF 656
>sp|Q9NZR2|LRP1B_HUMAN Low-density lipoprotein receptor-related protein 1B OS=Homo sapiens
GN=LRP1B PE=1 SV=2
Length = 4599
Score = 179 bits (453), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 184/420 (43%), Gaps = 100/420 (23%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTP-LGALCTCPPGEILSN 63
C+ K+C+GK DCP+G+DEG CD EC G CSN C P G +C+CP G L+
Sbjct: 1150 CLQPEKLCNGKKDCPDGSDEGYLCD--ECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLNK 1207
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D+ TC+ ++ C CSQ+C K + CSC EG+ L+ D +C +++ AF+I S R
Sbjct: 1208 DNKTCEIVDYCSNHLKCSQVCEQHKHTVKCSCYEGWKLDVDGESCTSVDPFEAFIIFSIR 1267
Query: 124 HSILVADLE------------------------------------------EKGKDHRAQ 141
H I DL E G +
Sbjct: 1268 HEIRRIDLHKRDYSLLVPGLRNTIALDFHFNQSLLYWTDVVEDRIYRGKLSESGGVSAIE 1327
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
+V GL EGL DWI G+IYW+DS L++IEV +G+ R L + PR + LDP
Sbjct: 1328 VVVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDP 1387
Query: 202 SPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSK 258
G LFWTDW N PRIE M G+ R TI WPNGLT+D +R+ + D++
Sbjct: 1388 RYGI--LFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAR 1445
Query: 259 LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEAL 318
D I YS ++ DG+N ++ G Y +
Sbjct: 1446 SDAI------------YSALY----------------------DGTNMIEIIRGHEYLSH 1471
Query: 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-------KIYWPN 371
+ LY S ++WTDW N + G N S I T +IY P+
Sbjct: 1472 PFAVS---LYGSE------VYWTDWRTNTLSKANKWTGQNVSVIQKTSAQPFDLQIYHPS 1522
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 144/294 (48%), Gaps = 44/294 (14%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAEC-KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
RC+ +CD K DC +G+DE C + EC K CS C P+ C C PG L
Sbjct: 2902 RCIPSGGLCDNKDDCGDGSDE-RNCHINECLSKKVSGCSQDCQDLPVSYKCKCWPGFQLK 2960
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN-HTCKAINHSAAFLIIS 121
+D TC D++EC CSQ C NT G+Y C C +GY ++ DN + CK+++ FLI++
Sbjct: 2961 DDGKTCVDIDECSSGFPCSQQCINTYGTYKCLCTDGYEIQPDNPNGCKSLSDEEPFLILA 3020
Query: 122 NRHSILVAD-------LEEKGK--------DHRAQDI----------------------- 143
+ H I L ++G D+R + I
Sbjct: 3021 DHHEIRKISTDGSNYTLLKQGLNNVIAIDFDYREEFIYWIDSSRPNGSRINRMCLNGSDI 3080
Query: 144 -VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
VV + LA DWIG ++YW D+ IEV NG +L + PR + LDP
Sbjct: 3081 KVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLNGLYPTILVSKRLKFPRDLSLDPQ 3140
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
G +L+W D E P I R+GMDG+N+S +I TKI P LT+D RR+Y+AD
Sbjct: 3141 AG--YLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNRRLYWAD 3192
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 150/312 (48%), Gaps = 55/312 (17%)
Query: 2 ADRCVNLTKVCDGKTDCPNGADEGPGCD--LAECKHKFGLCSNTCHPTPLGALCTCPPGE 59
++CV+L+++C+G DCP+G DEG C L+ C+ C C C C G
Sbjct: 87 TNKCVHLSQLCNGVLDCPDGYDEGVHCQELLSNCQQLN--CQYKCTMVRNSTRCYCEDGF 144
Query: 60 ILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI---NHSAA 116
++ D +C+D +EC G CSQ C NT GSY CSC EGY+++ DN +CKA
Sbjct: 145 EITEDGRSCKDQDECAVYGTCSQTCRNTHGSYTCSCVEGYLMQPDNRSCKAKIEPTDRPP 204
Query: 117 FLIISNRHSI-------------------------------LVADLEEKGKDHRAQDI-- 143
L+I+N +I ++ +E + ++ + I
Sbjct: 205 ILLIANFETIEVFYLNGSKMATLSSVNGNEIHTLDFIYNEDMICWIESRESSNQLKCIQI 264
Query: 144 -------------VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ V+ +A DW+ ++Y++D +RI VC+ NG+ + L
Sbjct: 265 TKAGGLTDEWTINILQSFHNVQQMAIDWLTRNLYFVDHVGDRIFVCNSNGSVCVTLIDLE 324
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P+ + +DP G LF+TD+G ++ER MDG NR+ II +K P L LD+ +
Sbjct: 325 LHNPKAIAVDPIAGK--LFFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNK 382
Query: 251 RVYFADSKLDFI 262
VY+ D LD++
Sbjct: 383 LVYWVDLYLDYV 394
Score = 118 bits (296), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 137/323 (42%), Gaps = 61/323 (18%)
Query: 69 QDMNECE-QPGYCSQMCTNT-KGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
Q N C+ G CSQ+C T + + C C GY L+ + +C+ I +FL+ S I
Sbjct: 1833 QGSNSCQLNNGGCSQLCLPTSETTRTCMCTVGYYLQKNRMSCQGIE---SFLMYSVHEGI 1889
Query: 127 LVADLEEKGK----------------DHRAQ-------------------------DIVV 145
LE K D A+ DI+
Sbjct: 1890 RGIPLEPSDKMDALMPISGTSFAVGIDFHAENDTIYWTDMGFNKISRAKRDQTWKEDIIT 1949
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+GL VEG+A DWI G+IYW D N IEV NG+ R V+ + QPR + + P G
Sbjct: 1950 NGLGRVEGIAVDWIAGNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIAVHPEKGL 2009
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
LFWT+WG+ P I + +DGS + ++S I WPNG+++D ++Y+ D++ D I+
Sbjct: 2010 --LFWTEWGQMPCIGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERI 2067
Query: 266 SLEIKTN------------VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
LE N + + +YW D ++ G N D + + +G
Sbjct: 2068 DLETGGNREMVLSGSNVDMFSVAVFGAYIYWSDRAHANGSVRRGHKN-DATETITMRTGL 2126
Query: 314 LYEALALDLENGMLYYSTLKCTR 336
+ + N + T C R
Sbjct: 2127 GVNLKEVKIFNRVREKGTNVCAR 2149
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 138/328 (42%), Gaps = 74/328 (22%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAE----CKHKFGLCSNT--CHPTPLGALCTCPP 57
+C+ + CD DC +G+DE GC +A C+ C + C+ C C P
Sbjct: 3773 KCIPMDLQCDRLDDCGDGSDE-QGCRIAPTEYTCEDNVNPCGDDAYCNQIKTSVFCRCKP 3831
Query: 58 GEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
G + + C+D+NEC G CS C N +GSY C C++ + + N+TC A
Sbjct: 3832 GFQRNMKNRQCEDLNECLVFGTCSHQCINVEGSYKCVCDQNF--QERNNTCIAEGSEDQV 3889
Query: 118 LIISNRHSIL--------------VADLEEKGK-----DHRAQDIVV------------- 145
L I+N IL ++ +E + + +D+++
Sbjct: 3890 LYIANDTDILGFIYPFNYSGDHQQISHIEHNSRITGMDVYYQRDMIIWSTQFNPGGIFYK 3949
Query: 146 -----------SGLDLVE-----GLAYDWIGGHIYWLD-SRLN--------------RIE 174
SGL E +A DW+ G+IYW D SR++ I
Sbjct: 3950 RIHGREKRQANSGLICPEFKRPRDIAVDWVAGNIYWTDHSRMHWFSYYTTHWTSLRYSIN 4009
Query: 175 VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
V NG N L + +P + ++P G ++WT G++ IE MDG+ R ++
Sbjct: 4010 VGQLNGPNCTRLLTNMAGEPYAIAVNPKRGM--MYWTVVGDHSHIEEAAMDGTLRRILVQ 4067
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFI 262
+ P GL +D + R+Y+AD +L I
Sbjct: 4068 KNLQRPTGLAVDYFSERIYWADFELSII 4095
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 107/240 (44%), Gaps = 55/240 (22%)
Query: 77 PGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA-DLEE 133
PG CS +C +++ + C C G+ L D +CK + R I+ DL
Sbjct: 483 PGGCSHICLLSSSYKTRTCRCRTGFNLGSDGRSCKRPKNELFLFYGKGRPGIVRGMDLNT 542
Query: 134 KGKDH-----------RAQD------------------------------IVVSGLDLVE 152
K D RA D I+ LD VE
Sbjct: 543 KIADEYMIPIENLVNPRALDFHAETNYIYFADTTSFLIGRQKIDGTERETILKDDLDNVE 602
Query: 153 GLAYDWIGGHIYWL-DSRLNRIEVC--DENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
G+A DWIG ++YW D I V ++ +R L + ++ PRG+++DP G W++
Sbjct: 603 GIAVDWIGNNLYWTNDGHRKTINVARLEKASQSRKTLLEGEMSHPRGIVVDPVNG--WMY 660
Query: 210 WTDWGENP------RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263
WTDW E+ RIE+ MDG NR +++K+ WPNGLTLD T +Y+ D+ D I+
Sbjct: 661 WTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTNTLYWCDAYYDHIE 720
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 17/131 (12%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDLENGMLYYSTLKCT 335
+ R LY++D G+ +I N +GS L+ +L+ +A+A+D G L
Sbjct: 293 LTRNLYFVDHVGD----RIFVCNSNGSVCVTLIDLELHNPKAIAVDPIAGKL-------- 340
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
F+TD+G ++ER MDG NR+ II +K P L LD+ + VY+ D LD++
Sbjct: 341 ---FFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVGVV 397
Query: 396 NYDGTGRQQVI 406
+Y G R VI
Sbjct: 398 DYQGKNRHTVI 408
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 333 KCTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391
+C +FWT+W E +P I R + G N ++ST I PNGLT+D ++YF+D L
Sbjct: 2327 ECQNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGK 2386
Query: 392 IDFCNYDGTGRQQVI 406
I+ C YDG+ R ++
Sbjct: 2387 IERCEYDGSQRHVIV 2401
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 138/310 (44%), Gaps = 39/310 (12%)
Query: 78 GYCSQMC-TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGK 136
G CS MC N S C+C L D TC + FL+ + R I D++
Sbjct: 1538 GPCSHMCLINHNRSAACACPHLMKLSSDKKTCYEMK---KFLLYARRSEIRGVDIDNPYF 1594
Query: 137 DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRG 196
+ V +D V + +D +YW D + I+ NGT + +I RG
Sbjct: 1595 NFITA-FTVPDIDDVTVIDFDASEERLYWTDIKTQTIKRAFINGTGLETVISRDIQSIRG 1653
Query: 197 MMLDPSPGTRWLFW-TDWGENPRIERIGMDGSNRSTIIS--------------TKIYWPN 241
+ +D +R L+W + + +I +DGS +++II K+YW +
Sbjct: 1654 LAVDWV--SRNLYWISSEFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD 1711
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
G T+++A + ++SK+ F + K + +++Y + KLYWI GNG I + N+
Sbjct: 1712 GNTINMAN--MDGSNSKILFQNQKE-PVGLSIDY--VENKLYWI-SSGNGT---INRCNL 1762
Query: 302 DGSNASILVS--GQLYEALALDLENGMLYYSTLKCTRWLFWTDW-GENPRIERIGMDGSN 358
DG N ++ S +L +A AL + + L+++ + + G NP I R +
Sbjct: 1763 DGGNLEVIESMKEELTKATALTIMDKKLWWADQNLAQLGTCSKRDGRNPTILR-----NK 1817
Query: 359 RSTIISTKIY 368
S ++ K+Y
Sbjct: 1818 TSGVVHMKVY 1827
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 95/224 (42%), Gaps = 33/224 (14%)
Query: 198 MLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 257
++D L+WTD + I+R ++G+ T+IS I GL +D +R +Y+ S
Sbjct: 1610 VIDFDASEERLYWTDI-KTQTIKRAFINGTGLETVISRDIQSIRGLAVDWVSRNLYWISS 1668
Query: 258 KLDFIDCKSLEIKTNVNYSTIFR--------------KLYWIDEGGNGVPLKIGKANMDG 303
+ D + ++ S I KLYW D GN I ANMDG
Sbjct: 1669 EFDETQINVARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTD--GN----TINMANMDG 1722
Query: 304 SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
SN+ IL Q E + L ++ Y K L+W G N I R +DG N I
Sbjct: 1723 SNSKILFQNQ-KEPVGLSID-----YVENK----LYWISSG-NGTINRCNLDGGNLEVIE 1771
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407
S K L I +++++AD L + C+ GR IL
Sbjct: 1772 SMKEELTKATALTIMDKKLWWADQNLAQLGTCS-KRDGRNPTIL 1814
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 94/242 (38%), Gaps = 58/242 (23%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-----NRIEVCDENGTNR---IVLAKDNIT 192
+ ++V + VEGLAY +YW S + ++ +R I +++D+
Sbjct: 2261 RQVIVENVGSVEGLAYHRAWDTLYWTSSTTSSITRHTVDQTRPGAFDREAVITMSEDD-- 2318
Query: 193 QPRGMMLDPSPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 251
P + LD +FWT+W E +P I R + G N ++ST I PNGLT+D +
Sbjct: 2319 HPHVLALDEC--QNLMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEK 2376
Query: 252 VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311
+YF+D L KI + DGS ++V
Sbjct: 2377 LYFSDGSLG----------------------------------KIERCEYDGSQRHVIVK 2402
Query: 312 GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
L+L + + ++FW+DWG + G + + S + P
Sbjct: 2403 SGPGTFLSLAVYDN-----------YIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPM 2451
Query: 372 GL 373
G+
Sbjct: 2452 GI 2453
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ +V + + GL D+ +Y+ D L +IE C+ +G+ R V+ K G L
Sbjct: 2354 AQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGKIERCEYDGSQRHVIVKSG----PGTFL 2409
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ ++FW+DWG + G + + S + P G+
Sbjct: 2410 SLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGI 2453
Score = 36.2 bits (82), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLAKDNITQPRGMML 199
Q V S + GL D+ +YW D+ + IE NGT+R IV + + P G+
Sbjct: 687 QIFVTSKMLWPNGLTLDFHTNTLYWCDAYYDHIEKVFLNGTHRKIVYSGRELNHPFGL-- 744
Query: 200 DPSPGTRWLFWTDW 213
S ++FWTD+
Sbjct: 745 --SHHGNYVFWTDY 756
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 1 VADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALC 53
+D C++ + C+G+ DC +G+DE + ECK C N H P+ LC
Sbjct: 3602 ASDGCISASLKCNGEYDCADGSDEMDC--VTECKEDQFRCKNKAHCIPIRWLC 3652
>sp|Q99087|LDLR1_XENLA Low-density lipoprotein receptor 1 OS=Xenopus laevis GN=ldlr-a PE=2
SV=1
Length = 909
Score = 176 bits (445), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 158/304 (51%), Gaps = 47/304 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + KVC+ K DC + +DE C EC G CS+ C+ +G C C G L
Sbjct: 286 ECITMDKVCNKKRDCRDWSDEPLKECGENECLRNNGGCSHICNDLKIGYECLCNEGYRLV 345
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D+NECE P CSQ+C N G Y C C EGY ++ +CK+I + A+L +N
Sbjct: 346 -DQKRCEDINECENPNTCSQICINLVGGYKCECREGYQMDPVTASCKSIG-TVAYLFFTN 403
Query: 123 RH--------------------SILVADLE---------------------EKGKDHRAQ 141
RH +++ D+E EK +
Sbjct: 404 RHEVRKMTLDRSEYTSVIPRLKNVVALDMEIASNKIYWSDLTQRKIYSASMEKADNTSHH 463
Query: 142 DIVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ V+S + +G+A DWI G+IYW DS+ + I V + G+ R D++ +PR +++D
Sbjct: 464 ETVISNQIQAPDGIAVDWIHGNIYWTDSKFSTISVANTEGSKRRTPPSDDLEKPRDIVVD 523
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
PS G +++WTDWG +IE+ G++G +R +++ I WPNG+TLD+ +R+Y+ DSKL
Sbjct: 524 PSQG--FMYWTDWGLPAKIEKGGLNGVDRYPLVTENIEWPNGITLDLINQRLYWVDSKLH 581
Query: 261 FIDC 264
+ C
Sbjct: 582 SLSC 585
Score = 32.7 bits (73), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 6/35 (17%)
Query: 3 DRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKF 37
+RC+ ++ CDG+TDC NG+DE +C HK
Sbjct: 80 NRCIPMSWKCDGQTDCENGSDEN------DCTHKV 108
>sp|Q99088|LDLR2_XENLA Low-density lipoprotein receptor 2 OS=Xenopus laevis GN=ldlr-b PE=2
SV=1
Length = 892
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 158/303 (52%), Gaps = 47/303 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ + KVC K DC + DE C EC G CS+ C+ +G C C G L
Sbjct: 287 CITMDKVCHKKRDCRDWTDEPIKECGENECLRNNGGCSHICNDLKIGYECLCNEGYRLV- 345
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D C+D+NECE P C+Q+C N G Y C C EGY ++ +CK+I + A+L +NR
Sbjct: 346 DQKRCEDINECENPNTCTQICINLHGGYKCECREGYQMDPVTASCKSIG-TVAYLFFTNR 404
Query: 124 H--------------------SILVADLE---------------------EKGKDHRAQD 142
H +++ D+E +K + +
Sbjct: 405 HEVRKMTLDRSEYTSFIPRLKNVVALDMEIASNKIYWSDLTQRKIYSASMDKADNTSHHE 464
Query: 143 IVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
V+S + +G+A DWI G+IYW DS+ + I V + G+ R L D++ +PR +++DP
Sbjct: 465 TVISNQIQAPDGIAVDWIHGNIYWTDSKFSTISVANTEGSKRKTLFTDDLAKPRDIVVDP 524
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
S G +++WTDWG +IE+ G++G +R +++ I WPNG+TLD+ ++R+Y+ DSKL
Sbjct: 525 SQG--FMYWTDWGLPAKIEKGGLNGVDRYPLVTDNIEWPNGITLDLISQRLYWVDSKLHS 582
Query: 262 IDC 264
+ C
Sbjct: 583 LSC 585
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 26/152 (17%)
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
++ K +D S + + +L +ALD+E + ++W+D + +I M
Sbjct: 406 EVRKMTLDRSEYTSFIP-RLKNVVALDMEIA---------SNKIYWSDLTQR-KIYSASM 454
Query: 355 DG----SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
D S+ T+IS +I P+G+ +D +Y+ DSK I N +G+ R+ +
Sbjct: 455 DKADNTSHHETVISNQIQAPDGIAVDWIHGNIYWTDSKFSTISVANTEGSKRKTL----- 509
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
FT+DL + +D G +Y++ G
Sbjct: 510 ---FTDDLAKPRDI---VVDPSQGFMYWTDWG 535
>sp|P98163|YL_DROME Putative vitellogenin receptor OS=Drosophila melanogaster GN=yl
PE=1 SV=2
Length = 1984
Score = 174 bits (442), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 150/312 (48%), Gaps = 61/312 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADE------GPGCDLAECKHKFGLCSNTCHPTPL-GALCTCPP 57
C+ L++VCDG +DC +G+DE P CD +C CH P GA C CP
Sbjct: 281 CLTLSEVCDGHSDCSDGSDETDLCHSKPDCDAKKCA-----LGAKCHMMPASGAECFCPK 335
Query: 58 GEILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI----N 112
G L+ C+D++EC EQ CSQ C NT G Y C C+ GY+L+ DN TC+A+
Sbjct: 336 GFRLAKFEDKCEDVDECKEQDDLCSQGCENTSGGYRCVCDAGYLLDKDNRTCRAVVYGSK 395
Query: 113 HSAAFLIISNRHSILVADLEE--------------------------------------- 133
L+ + + +I+ L E
Sbjct: 396 EQQPLLLYTTQMTIMGMHLREDNVRNHVYQVAGNLSKVIGVAYDGSHIYWTNIQNEAESI 455
Query: 134 ---KGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
G A+ ++ SGLD E LA DW+ +IY+ D+ + I VC +G N VL +
Sbjct: 456 VKANGDGSNAEILLTSGLDAPEDLAVDWLTQNIYFSDNIMRHIAVCSNDGLNCAVLVTQD 515
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ QPR + + P G +FWTDWGE P I R MDGS I+S I WPNG+ LD+ +
Sbjct: 516 VHQPRSLAVWPQKG--LMFWTDWGEKPMIGRASMDGSRSRPIVSDNIEWPNGIALDMHQQ 573
Query: 251 RVYFADSKLDFI 262
R+Y+ D+KL +
Sbjct: 574 RIYWVDAKLGSV 585
Score = 108 bits (270), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 137/317 (43%), Gaps = 59/317 (18%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFG--LCSNTCHPTPLGALCTCPPGEILS 62
CV+L++VC+ DC NG DEGP C A C+ G +C + C TP GA+C+C G L
Sbjct: 1352 CVDLSRVCNNFPDCTNGHDEGPKCATA-CRSASGRQVCQHKCRATPAGAVCSCFDGYRLD 1410
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D +C D++EC++ C+Q+C NT G Y C C+ ++L D +CK++ A L S
Sbjct: 1411 ADQKSCLDIDECQEQQPCAQLCENTLGGYQCQCHADFMLRQDRVSCKSLQSGATLLFSSF 1470
Query: 123 RHSILVADLEEK----GKDHRAQDIVVSGLDLV------------EGLAY---------- 156
V +L E+ A D ++G DL EG+ Y
Sbjct: 1471 NE---VRNLSEQPVMLNVAWSANDSRITGFDLAMHRQMGYFSAEDEGIVYQIDLQTKVIV 1527
Query: 157 -------------DWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDP 201
DW+ G++Y L S I+ C G RIV ++ PR +
Sbjct: 1528 RALGLPAPTKLSVDWVTGNVYVL-SGAQEIQACSFVGRMCGRIV----HVKSPRHVKHLA 1582
Query: 202 SPGTRWLFW------TDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 254
G + +G+ + I +DGS R ++ + LT D + +YF
Sbjct: 1583 VDGYHARIFYIVIRTEGYGQTSSEIHMARLDGSRRDMLLQRSESFMTALTTDPHQQLLYF 1642
Query: 255 ADSKLDFIDCKSLEIKT 271
D + ++ S +KT
Sbjct: 1643 VDQHMRTLERISYRLKT 1659
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 175/447 (39%), Gaps = 89/447 (19%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAE--CKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ + +CDG+ DC + +DE GC AE C + LC+N G L
Sbjct: 197 CIPIDFMCDGRPDCTDKSDEVAGCKQAEITCPGEGHLCAN---------------GRCLR 241
Query: 63 NDSVTCQDMNEC----EQPGYCSQMCTNTKGSYICSCNEGYVLEY---DNHT-------- 107
C +++C ++ G C +C KG ++C E + D H+
Sbjct: 242 RKQWVCDGVDDCGDGSDERG-CLNLCEPQKGKFLCRNRETCLTLSEVCDGHSDCSDGSDE 300
Query: 108 --------------------CKAINHSAAFLIISNRHSILVADLEEKGKD----HRAQDI 143
C + S A +A E+K +D D+
Sbjct: 301 TDLCHSKPDCDAKKCALGAKCHMMPASGAECFCPK--GFRLAKFEDKCEDVDECKEQDDL 358
Query: 144 VVSGLDLVEGLAYDWI--GGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
G + G Y + G++ D+R R V ++L +T GM L
Sbjct: 359 CSQGCENTSG-GYRCVCDAGYLLDKDNRTCRAVVYGSKEQQPLLLYTTQMT-IMGMHLRE 416
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
R + G ++ + DGS+ IYW N + + S +
Sbjct: 417 D-NVRNHVYQVAGNLSKVIGVAYDGSH--------IYWTNIQNEAESIVKANGDGSNAEI 467
Query: 262 IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALD 321
+ L+ ++ + + +Y+ D + I + DG N ++LV+ +++ +L
Sbjct: 468 LLTSGLDAPEDLAVDWLTQNIYFSDN----IMRHIAVCSNDGLNCAVLVTQDVHQPRSLA 523
Query: 322 L--ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
+ + G+ +FWTDWGE P I R MDGS I+S I WPNG+ LD+
Sbjct: 524 VWPQKGL-----------MFWTDWGEKPMIGRASMDGSRSRPIVSDNIEWPNGIALDMHQ 572
Query: 380 RRVYFADSKLDFIDFCNYDGTGRQQVI 406
+R+Y+ D+KL + DGTGR+ V+
Sbjct: 573 QRIYWVDAKLGSVQTVRPDGTGRRTVL 599
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 10/108 (9%)
Query: 139 RAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198
R++ IV ++ G+A D IYW+D++L ++ +GT R + + P G+
Sbjct: 551 RSRPIVSDNIEWPNGIALDMHQQRIYWVDAKLGSVQTVRPDGTGRRTVLDGMLKHPYGLA 610
Query: 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNR------STIISTKIYWP 240
+ L+W+DW G + TI + IY P
Sbjct: 611 IFED----QLYWSDWATKSVHACHKFSGKDHRILAKDRTIYAVHIYHP 654
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 108/276 (39%), Gaps = 36/276 (13%)
Query: 27 GCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMN-------------- 72
GC+ A C H L P G C CP G L+ D C M
Sbjct: 663 GCENATCSHLCLLAE----PEIGGHSCACPDGMRLAPDHRRCMLMEKRQRLFIGLGQVLL 718
Query: 73 ECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLE 132
E E + + + + C NE + Y+ IN S LII++ L+ LE
Sbjct: 719 EIEHTAFGRHQVSKSY-TLPCLINE---MVYNR-----INGS---LIIADNDQRLI--LE 764
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA-KDNI 191
+ + H + +V S L V LA+D + ++YW D+ IEV +R ++
Sbjct: 765 FQPESHESNVLVRSNLGNVSALAFDHLSRNLYWADTERAVIEVLSLQTRHRALIRFFPGQ 824
Query: 192 TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL--DIAT 249
P G+ + P+ G ++ + I++I + G + + + L D T
Sbjct: 825 EVPIGLTVMPAEGYLYVVLK-AKRHSHIDKIPLSGKGEQVHVFEDDLGDDDIKLVTDYET 883
Query: 250 RRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285
+ ++++DS L I + + + + R+ Y +
Sbjct: 884 QTIFWSDSDLGRISYSNYRVPHSQIFRGKLRRPYSL 919
>sp|P35950|LDLR_CRIGR Low-density lipoprotein receptor OS=Cricetulus griseus GN=LDLR PE=3
SV=2
Length = 862
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 157/300 (52%), Gaps = 46/300 (15%)
Query: 5 CVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSN 63
C+ L KVCD DC + +DE C EC G CS+ C +G C CP G L
Sbjct: 290 CIALDKVCDSMRDCRDWSDEPIKDCRTNECLDNNGGCSHVCKDLKIGYECLCPNGFQLV- 348
Query: 64 DSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNR 123
D C+D++EC++P C Q+C N +GSY C C G+ ++ CKA+ S A+L+ +NR
Sbjct: 349 DQHRCEDIDECQEPDTCDQLCVNLEGSYKCECRAGFHMDPHTRVCKAVG-SVAYLLFTNR 407
Query: 124 HSI------------LVADLE-------------------EKGKDHRA---------QDI 143
H + L+ +L+ +GK + A D
Sbjct: 408 HEVRKMTLDRSEYTSLIPNLKNVVALDTEVANNRIYWSDLSQGKIYSALMDQAPTLSYDT 467
Query: 144 VVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
++SG L +GLA DWI G+IYW DS + V D G R L ++ ++PR +++DP
Sbjct: 468 IISGDLQAPDGLAVDWIHGNIYWTDSVPGSVSVADTKGIRRRTLFQEKGSRPRDIVVDPV 527
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++WTDWG +I++ G++G + ++++ I WPNG+TLDI + R+Y+ DSKL I
Sbjct: 528 HG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTEDIQWPNGITLDIPSGRLYWVDSKLHSI 585
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 164/411 (39%), Gaps = 69/411 (16%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC--KHKFGLCSNTCHPTPLGALC-TCPPGEIL 61
C++ ++ CD + DC + +DE ++ +C +KF S C L +C +
Sbjct: 249 CIHGSRQCDREYDCKDMSDELGCINVTQCDGPNKFKCHSGEC--IALDKVCDSMRDCRDW 306
Query: 62 SNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLII 120
S++ + NEC + G CS +C + K Y C C G+ L D H C+ I+
Sbjct: 307 SDEPIKDCRTNECLDNNGGCSHVCKDLKIGYECLCPNGFQL-VDQHRCEDIDECQEPDTC 365
Query: 121 SNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG 180
L + + + D V +AY + + + R D +
Sbjct: 366 DQLCVNLEGSYKCECRAGFHMDPHTRVCKAVGSVAY------LLFTNRHEVRKMTLDRSE 419
Query: 181 TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS---NRSTIISTKI 237
++ N+ + LD ++W+D + +I MD + + TIIS +
Sbjct: 420 YTSLIPNLKNV-----VALDTEVANNRIYWSDLSQG-KIYSALMDQAPTLSYDTIISGDL 473
Query: 238 YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297
P+GL +D I +YW D VP +
Sbjct: 474 QAPDGLAVDW------------------------------IHGNIYWTD----SVPGSVS 499
Query: 298 KANMDGSNASILVS--GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A+ G L G + +D +G +Y WTDWG +I++ G++
Sbjct: 500 VADTKGIRRRTLFQEKGSRPRDIVVDPVHGFMY-----------WTDWGTPAKIKKGGLN 548
Query: 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
G + ++++ I WPNG+TLDI + R+Y+ DSKL I + +G R+ ++
Sbjct: 549 GVDIYSLVTEDIQWPNGITLDIPSGRLYWVDSKLHSISSIDVNGGNRKTIL 599
Score = 37.4 bits (85), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD--NITQPRGMMLD 200
+V + G+ D G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 555 LVTEDIQWPNGITLDIPSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKQLAHPFSLAIY 614
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 615 EDK----VFWTD 622
>sp|P98165|VLDLR_CHICK Very low-density lipoprotein receptor OS=Gallus gallus GN=VLDLR
PE=1 SV=1
Length = 863
Score = 168 bits (426), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 166/338 (49%), Gaps = 59/338 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+++ KVC+ DC + +DE C++ EC G CS+ C +G C CP G L
Sbjct: 348 ECIDINKVCNHHGDCKDWSDEPLKECNINECLVNNGGCSHICRDLVIGYECDCPAGFELV 407
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ LI +N
Sbjct: 408 -DRRTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPC-LIFTN 465
Query: 123 RHSI----------------------LVADLEEKG---KDHRAQDIVVSGLDLVE----- 152
R I L AD+ E+ D + I + +D +
Sbjct: 466 RRDIRKIGLERKEYIQLVEQLRNTVALDADIAEQKLYWADFSQKAIFSASIDTRDKVGTH 525
Query: 153 -----------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
G+A DWI +IYW DS I V NG R VL + +P + +DP
Sbjct: 526 TRILDNIHSPAGIAVDWIYKNIYWTDSSAKTISVASLNGKKRKVLFLSELREPASIAVDP 585
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++W+DWGE +IE+ GM+G +R +++T+I WPNG+ LD+ R+Y+ DSKL
Sbjct: 586 LSG--FMYWSDWGEPAKIEKAGMNGFDRQQLVTTEIQWPNGIALDLVKSRLYWLDSKLHM 643
Query: 262 IDC-------KSLEIKTNVNYS-----TIFR-KLYWID 286
+ + L +K+++ TIF +++WID
Sbjct: 644 LSSVDLNGQDRRLVLKSHMFLPHPLALTIFEDRVFWID 681
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 102/206 (49%), Gaps = 34/206 (16%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST- 277
I +IG++ ++ ++ L DIA +++Y+AD I S++ + V T
Sbjct: 469 IRKIGLERKEYIQLVE-QLRNTVALDADIAEQKLYWADFSQKAIFSASIDTRDKVGTHTR 527
Query: 278 ---------------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALAL 320
I++ +YW D + + A+++G +L +L E ++A+
Sbjct: 528 ILDNIHSPAGIAVDWIYKNIYWTDSSAKTISV----ASLNGKKRKVLFLSELREPASIAV 583
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
D +G +Y W+DWGE +IE+ GM+G +R +++T+I WPNG+ LD+
Sbjct: 584 DPLSGFMY-----------WSDWGEPAKIEKAGMNGFDRQQLVTTEIQWPNGIALDLVKS 632
Query: 381 RVYFADSKLDFIDFCNYDGTGRQQVI 406
R+Y+ DSKL + + +G R+ V+
Sbjct: 633 RLYWLDSKLHMLSSVDLNGQDRRLVL 658
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q +V + + G+A D + +YWLDS+L+ + D NG +R ++ K ++ P + L
Sbjct: 612 QQLVTTEIQWPNGIALDLVKSRLYWLDSKLHMLSSVDLNGQDRRLVLKSHMFLPHPLAL- 670
Query: 201 PSPGTRWLFWTDWGENPRI 219
+ +FW D GEN +
Sbjct: 671 -TIFEDRVFWID-GENEAV 687
>sp|Q28832|LDLR_PIG Low-density lipoprotein receptor (Fragment) OS=Sus scrofa GN=LDLR
PE=1 SV=2
Length = 811
Score = 168 bits (425), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 168/339 (49%), Gaps = 60/339 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 259 ECISLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKIGYECLCPEGFQLV 318
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC+ P CSQ+C N +GSY C C EG+ LE CKAI + A+L +N
Sbjct: 319 -DKHRCEDIDECQDPDACSQICVNLEGSYKCQCEEGFQLEPLTKACKAIG-TIAYLFFTN 376
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L+ ++ +
Sbjct: 377 RHEVRKMTLDRSEYTSLIPNLKNVVALDTEVASNRIYWSDLSQRKIYSTQIDRAPSFSSY 436
Query: 142 DIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D ++ L +GLA DWI +IYW DS L + V D G R L ++ ++PR +++D
Sbjct: 437 DTIIGEDLQAPDGLAVDWIHSNIYWTDSILGTVSVADTKGVKRKTLFQEKGSKPRAIVVD 496
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD++ R+Y+ DSKL
Sbjct: 497 PVHG--FMYWTDWGTPAKIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLH 554
Query: 261 FIDC---------KSLEIKTNVNYS---TIFR-KLYWID 286
I LE KT + + IF K++W D
Sbjct: 555 SISSIDVNGGNRKTVLEDKTKLAHPFSLAIFEDKVFWTD 593
>sp|P35952|LDLR_RAT Low-density lipoprotein receptor OS=Rattus norvegicus GN=Ldlr PE=2
SV=1
Length = 879
Score = 168 bits (425), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 156/301 (51%), Gaps = 46/301 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L KVC+ DC + +DE C EC G CS+ C +G C CP G L
Sbjct: 289 ECISLDKVCNSARDCRDWSDEPIKECKTNECLDNNGGCSHICKDLKIGYECLCPSGFRLV 348
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC++P CSQ+C N +GS+ C C G+ ++ CKA+ S FL+ +N
Sbjct: 349 -DGHQCEDIDECQEPDTCSQLCVNLEGSFKCECRAGFHMDPHTRVCKAVG-SIGFLLFTN 406
Query: 123 RHSIL------------------VADLEEKGKDHR----------------------AQD 142
RH + V L+ + ++R + D
Sbjct: 407 RHEVRKMTLDRSEYTSLIPNLKNVVALDTEVANNRIYWSDLSQRKIYSAVMDQGTSLSYD 466
Query: 143 IVVSG-LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
++SG L +GLA DWI G+IYW DS + V D G R L ++ ++PR +++DP
Sbjct: 467 AIISGDLHAPDGLAVDWIHGNIYWTDSVPGTVSVADTKGVRRRTLFREKGSRPRAIVVDP 526
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL
Sbjct: 527 VHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTEDIQWPNGITLDLPSGRLYWVDSKLHS 584
Query: 262 I 262
I
Sbjct: 585 I 585
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 171/424 (40%), Gaps = 95/424 (22%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC--KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ ++ CD + DC + +DE ++ +C +KF S C L +C
Sbjct: 249 CIHGSRQCDREHDCKDMSDELGCINVTQCDGPNKFKCHSGEC--ISLDKVC--------- 297
Query: 63 NDSVTCQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI 111
N + C+D NEC + G CS +C + K Y C C G+ L D H C+ I
Sbjct: 298 NSARDCRDWSDEPIKECKTNECLDNNGGCSHICKDLKIGYECLCPSGFRL-VDGHQCEDI 356
Query: 112 NHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN 171
+ + S L +LE K + G D
Sbjct: 357 DECQE----PDTCSQLCVNLEGSFK-----------CECRAGFHMD-------------P 388
Query: 172 RIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI-GMDGSNRS 230
VC G+ +L N + R M LD S T + P ++ + +D +
Sbjct: 389 HTRVCKAVGSIGFLLFT-NRHEVRKMTLDRSEYTSLI--------PNLKNVVALD----T 435
Query: 231 TIISTKIYWPNGLTLDIATRRVYFA------DSKLDFIDCKSLEIKTNVNYSTIFRKLYW 284
+ + +IYW D++ R++Y A D I L + I +YW
Sbjct: 436 EVANNRIYWS-----DLSQRKIYSAVMDQGTSLSYDAIISGDLHAPDGLAVDWIHGNIYW 490
Query: 285 IDEGGNGVPLKIGKANMDGSNASILV--SGQLYEALALDLENGMLYYSTLKCTRWLFWTD 342
D VP + A+ G L G A+ +D +G +Y WTD
Sbjct: 491 TD----SVPGTVSVADTKGVRRRTLFREKGSRPRAIVVDPVHGFMY-----------WTD 535
Query: 343 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402
WG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL I + +G GR
Sbjct: 536 WGTPAKIKKGGLNGVDIYSLVTEDIQWPNGITLDLPSGRLYWVDSKLHSISSIDVNGGGR 595
Query: 403 QQVI 406
+ ++
Sbjct: 596 KTIL 599
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD--NITQPRGMMLD 200
+V + G+ D G +YW+DS+L+ I D NG R + +D + P + +
Sbjct: 555 LVTEDIQWPNGITLDLPSGRLYWVDSKLHSISSIDVNGGGRKTILEDEKQLAHPFSLAIY 614
Query: 201 PSPGTRWLFWTD 212
++WTD
Sbjct: 615 EDK----VYWTD 622
>sp|P98166|VLDLR_RAT Very low-density lipoprotein receptor OS=Rattus norvegicus GN=Vldlr
PE=2 SV=1
Length = 873
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 170/362 (46%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C+++TKVCD + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDITKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEKG-------------------------KDHRAQDIVVSGLDLVEG--- 153
NR I LE K D + I + +D G
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHF 506
Query: 154 -----------LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 32/204 (15%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
I +IG++ ++ ++ L DIA +++++AD I S++ K ++ I
Sbjct: 451 IRKIGLERKEYIQLVE-QLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHFKMI 509
Query: 279 --------------FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDL 322
++ +YW D + + A +DG+ L + L E ++A+D
Sbjct: 510 DNVYNPAAIAVDWVYKTIYWTDAASKTISV----ATLDGTKRKFLFNSDLREPASIAVDP 565
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+G +Y W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+
Sbjct: 566 LSGFVY-----------WSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRL 614
Query: 383 YFADSKLDFIDFCNYDGTGRQQVI 406
Y+ DSKL + + +G R+ V+
Sbjct: 615 YWLDSKLHMLSSVDLNGQDRRIVL 638
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 109/524 (20%), Positives = 182/524 (34%), Gaps = 130/524 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL-- 61
C++ CDG DC +G+DE S TC P C G +
Sbjct: 250 ECIHKKWRCDGDPDCKDGSDE------------VNCPSRTCRPDQF----ECEDGSCIHG 293
Query: 62 ------------SNDSVTCQDMNECEQPGY------------------------------ 79
+D V C+++N+C PG
Sbjct: 294 SRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDITKVCDQEQDCRDWSDEPLK 353
Query: 80 -------------CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
CS +C + Y C C G+ L D TC I+ I S
Sbjct: 354 ECHINECLVNNGGCSHICKDLVIGYECDCAAGFEL-IDRKTCGDIDECQNPGICSQ---- 408
Query: 127 LVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL 186
+ +L KG ++ + +DL G+ +G + + I I L
Sbjct: 409 ICINL--KGG-YKCECSRGYQMDLATGVCK-AVGKEPSLIFTNRRDIRKIGLERKEYIQL 464
Query: 187 AKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
+ Q R + LD + LFW D + D R + +Y P + +
Sbjct: 465 ----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHFKMIDNVYNPAAIAV 520
Query: 246 DIATRRVYFADSKLDFIDCKSLE-IKTNVNYSTIFRK------------LYWIDEGGNGV 292
D + +Y+ D+ I +L+ K +++ R+ +YW D G
Sbjct: 521 DWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPLSGFVYWSDW---GE 577
Query: 293 PLKIGKANMDGSNASILVSG--QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
P KI KA M+G + LV+ Q + LDL LY W D + +
Sbjct: 578 PAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLY-----------WLD-SKLHMLS 625
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ ++G +R ++ + + + L L I RVY+ D + + + N TG + L++
Sbjct: 626 SVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAVYGANK-FTGSELATLVNN 684
Query: 411 M-----VEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKTP 449
+ + ++L+ +G D+ENG G E+L P
Sbjct: 685 LNDAQDIIIYHELVQPSGKNWCEEDMENG-------GCEYLCLP 721
>sp|P35951|LDLR_MOUSE Low-density lipoprotein receptor OS=Mus musculus GN=Ldlr PE=1 SV=2
Length = 862
Score = 166 bits (419), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 152/301 (50%), Gaps = 46/301 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++L KVCD DC + +DE C EC G CS+ C +G+ C CP G L
Sbjct: 289 ECISLDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHICKDLKIGSECLCPSGFRLV 348
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
D C+D++EC++P CSQ+C N +GSY C C G+ ++ CKA+ S +L+ +N
Sbjct: 349 -DLHRCEDIDECQEPDTCSQLCVNLEGSYKCECQAGFHMDPHTRVCKAVG-SIGYLLFTN 406
Query: 123 RHSI-----------------------------------------LVADLEEKGKDHRAQ 141
RH + + + L ++ +
Sbjct: 407 RHEVRKMTLDRSEYTSLLPNLKNVVALDTEVTNNRIYWSDLSQKKIYSALMDQAPNLSYD 466
Query: 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP 201
I+ L +GLA DWI +IYW DS + V D G R L ++ ++PR +++DP
Sbjct: 467 TIISEDLHAPDGLAVDWIHRNIYWTDSVPGSVSVADTKGVKRRTLFQEAGSRPRAIVVDP 526
Query: 202 SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL
Sbjct: 527 VHG--FMYWTDWGTPAKIKKGGLNGVDIHSLVTENIQWPNGITLDLSSGRLYWVDSKLHS 584
Query: 262 I 262
I
Sbjct: 585 I 585
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 174/429 (40%), Gaps = 105/429 (24%)
Query: 5 CVNLTKVCDGKTDCPNGADEGPGCDLAEC--KHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C++ ++ CD + DC + +DE ++ +C +KF C GE +S
Sbjct: 249 CIHGSRQCDREHDCKDMSDELGCVNVTQCDGPNKF----------------KCHSGECIS 292
Query: 63 NDSVT-----CQD----------MNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNH 106
D V CQD NEC + G CS +C + K C C G+ L D H
Sbjct: 293 LDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHICKDLKIGSECLCPSGFRL-VDLH 351
Query: 107 TCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWL 166
C+ I+ + S L +LE K + G D
Sbjct: 352 RCEDIDECQE----PDTCSQLCVNLEGSYK-----------CECQAGFHMD--------- 387
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI-GMD 225
VC G+ +L N + R M LD S T L P ++ + +D
Sbjct: 388 ----PHTRVCKAVGSIGYLLFT-NRHEVRKMTLDRSEYTSLL--------PNLKNVVALD 434
Query: 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFA------DSKLDFIDCKSLEIKTNVNYSTIF 279
+ + + +IYW D++ +++Y A + D I + L + I
Sbjct: 435 ----TEVTNNRIYWS-----DLSQKKIYSALMDQAPNLSYDTIISEDLHAPDGLAVDWIH 485
Query: 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILV--SGQLYEALALDLENGMLYYSTLKCTRW 337
R +YW D VP + A+ G L +G A+ +D +G +Y
Sbjct: 486 RNIYWTD----SVPGSVSVADTKGVKRRTLFQEAGSRPRAIVVDPVHGFMY--------- 532
Query: 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397
WTDWG +I++ G++G + ++++ I WPNG+TLD+++ R+Y+ DSKL I +
Sbjct: 533 --WTDWGTPAKIKKGGLNGVDIHSLVTENIQWPNGITLDLSSGRLYWVDSKLHSISSIDV 590
Query: 398 DGTGRQQVI 406
+G R+ ++
Sbjct: 591 NGGNRKTIL 599
Score = 36.6 bits (83), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLD 200
+V + G+ D G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 555 LVTENIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNGGNRKTILEDENRLAHPFSLAIY 614
Query: 201 PSPGTRWLFWTD 212
++WTD
Sbjct: 615 EDK----VYWTD 622
>sp|P01130|LDLR_HUMAN Low-density lipoprotein receptor OS=Homo sapiens GN=LDLR PE=1 SV=1
Length = 860
Score = 166 bits (419), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 153/302 (50%), Gaps = 47/302 (15%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILS 62
C+ L KVC+ DC + +DE C EC G CS+ C+ +G C CP G L
Sbjct: 288 ECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLV 347
Query: 63 NDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN 122
C+D++EC+ P CSQ+C N +G Y C C EG+ L+ CKA+ S A+L +N
Sbjct: 348 AQR-RCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG-SIAYLFFTN 405
Query: 123 RHSI------------LVADLE-----------------------------EKGKDHRAQ 141
RH + L+ +L ++ +
Sbjct: 406 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY 465
Query: 142 DIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
D V+S + +GLA DWI +IYW DS L + V D G R L ++N ++PR +++D
Sbjct: 466 DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVD 525
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P G +++WTDWG +I++ G++G + ++++ I WPNG+TLD+ + R+Y+ DSKL
Sbjct: 526 PVHG--FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 583
Query: 261 FI 262
I
Sbjct: 584 SI 585
Score = 39.3 bits (90), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN--ITQPRGMMLD 200
+V + G+ D + G +YW+DS+L+ I D NG NR + +D + P + +
Sbjct: 555 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF 614
Query: 201 PSPGTRWLFWTD 212
+FWTD
Sbjct: 615 EDK----VFWTD 622
>sp|P98156|VLDLR_MOUSE Very low-density lipoprotein receptor OS=Mus musculus GN=Vldlr PE=1
SV=1
Length = 873
Score = 165 bits (417), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 169/362 (46%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVCD + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDMSKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEKG-------------------------KDHRAQDIVVSGLDLVEG--- 153
NR I LE K D + I + +D G
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHF 506
Query: 154 -----------LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+A DW+ IYW D+ I V +G R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGAKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 32/204 (15%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278
I +IG++ ++ ++ L DIA +++++AD I S++ K ++ I
Sbjct: 451 IRKIGLERKEYIQLVE-QLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHFKMI 509
Query: 279 --------------FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDL 322
++ +YW D + + A +DG+ L + L E ++A+D
Sbjct: 510 DNVYNPAAIAVDWVYKTIYWTDAASKTISV----ATLDGAKRKFLFNSDLREPASIAVDP 565
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
+G +Y W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+
Sbjct: 566 LSGFVY-----------WSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRL 614
Query: 383 YFADSKLDFIDFCNYDGTGRQQVI 406
Y+ DSKL + + +G R+ V+
Sbjct: 615 YWLDSKLHMLSSVDLNGQDRRIVL 638
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 109/524 (20%), Positives = 182/524 (34%), Gaps = 130/524 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL-- 61
C++ CDG DC +G+DE S TC P C G +
Sbjct: 250 ECIHKKWRCDGDPDCKDGSDE------------VNCPSRTCRPDQF----ECEDGSCIHG 293
Query: 62 ------------SNDSVTCQDMNECEQPGY------------------------------ 79
+D V C+++N+C PG
Sbjct: 294 SRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDMSKVCDQEQDCRDWSDEPLK 353
Query: 80 -------------CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
CS +C + Y C C G+ L D TC I+ I S
Sbjct: 354 ECHINECLVNNGGCSHICKDLVIGYECDCAAGFEL-IDRKTCGDIDECQNPGICSQ---- 408
Query: 127 LVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL 186
+ +L KG ++ + +DL G+ +G + + I I L
Sbjct: 409 ICINL--KGG-YKCECSRGYQMDLATGVCK-AVGKEPSLIFTNRRDIRKIGLERKEYIQL 464
Query: 187 AKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
+ Q R + LD + LFW D + D R + +Y P + +
Sbjct: 465 ----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHFKMIDNVYNPAAIAV 520
Query: 246 DIATRRVYFADSKLDFIDCKSLE-IKTNVNYSTIFRK------------LYWIDEGGNGV 292
D + +Y+ D+ I +L+ K +++ R+ +YW D G
Sbjct: 521 DWVYKTIYWTDAASKTISVATLDGAKRKFLFNSDLREPASIAVDPLSGFVYWSDW---GE 577
Query: 293 PLKIGKANMDGSNASILVSG--QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
P KI KA M+G + LV+ Q + LDL LY W D + +
Sbjct: 578 PAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLY-----------WLD-SKLHMLS 625
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ ++G +R ++ + + + L L I RVY+ D + + + N TG + L++
Sbjct: 626 SVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAVYGANK-FTGSELATLVNN 684
Query: 411 M-----VEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKTP 449
+ + ++L+ +G D+ENG G E+L P
Sbjct: 685 LNDAQDIIVYHELVQPSGKNWCEDDMENG-------GCEYLCLP 721
>sp|P98155|VLDLR_HUMAN Very low-density lipoprotein receptor OS=Homo sapiens GN=VLDLR PE=1
SV=1
Length = 873
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 171/362 (47%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ + DC + +DE C + EC G CS+ C +G C C G E++
Sbjct: 330 ECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQDIV---------------------V 145
NR I LE K D AQ + V
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHV 506
Query: 146 SGLDLV---EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+D V +A DW+ IYW D+ I V +GT R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 163/420 (38%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 290 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C + Y C C G+ L D TC
Sbjct: 350 EPLKECHINECLVNN-------------GGCSHICKDLVIGYECDCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCKA-VGKEPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVG 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 534 SKTISV----ATLDGTKRKFLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 638
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 109/524 (20%), Positives = 182/524 (34%), Gaps = 130/524 (24%)
Query: 4 RCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEIL-- 61
C++ CDG DC +G+DE S TC P C G +
Sbjct: 250 ECIHKKWRCDGDPDCKDGSDE------------VNCPSRTCRPDQF----ECEDGSCIHG 293
Query: 62 ------------SNDSVTCQDMNECEQPGY------------------------------ 79
+D V C+++N+C PG
Sbjct: 294 SRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLK 353
Query: 80 -------------CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI 126
CS +C + Y C C G+ L D TC I+ I S
Sbjct: 354 ECHINECLVNNGGCSHICKDLVIGYECDCAAGFEL-IDRKTCGDIDECQNPGICSQ---- 408
Query: 127 LVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL 186
+ +L KG ++ + +DL G+ +G + + I I L
Sbjct: 409 ICINL--KGG-YKCECSRGYQMDLATGVCK-AVGKEPSLIFTNRRDIRKIGLERKEYIQL 464
Query: 187 AKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTL 245
+ Q R + LD + LFW D + D R + +Y P + +
Sbjct: 465 ----VEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHVKMIDNVYNPAAIAV 520
Query: 246 DIATRRVYFADSKLDFIDCKSLE-IKTNVNYSTIFRK------------LYWIDEGGNGV 292
D + +Y+ D+ I +L+ K +++ R+ +YW D G
Sbjct: 521 DWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPLSGFVYWSDWG---E 577
Query: 293 PLKIGKANMDGSNASILVSG--QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350
P KI KA M+G + LV+ Q + LDL LY W D + +
Sbjct: 578 PAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLY-----------WLD-SKLHMLS 625
Query: 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ ++G +R ++ + + + L L I RVY+ D + + + N TG + L++
Sbjct: 626 SVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAVYGANK-FTGSELATLVNN 684
Query: 411 M-----VEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKTP 449
+ + ++L+ +G D+ENG G E+L P
Sbjct: 685 LNDAQDIIVYHELVQPSGKNWCEEDMENG-------GCEYLCLP 721
>sp|P35953|VLDLR_RABIT Very low-density lipoprotein receptor OS=Oryctolagus cuniculus
GN=VLDLR PE=2 SV=1
Length = 873
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 172/362 (47%), Gaps = 62/362 (17%)
Query: 4 RCVNLTKVCDGKTDCPNGADEG-PGCDLAECKHKFGLCSNTCHPTPLGALCTCPPG-EIL 61
C++++KVC+ + DC + +DE C + EC G CS+ C + +G C C G E++
Sbjct: 330 ECIDISKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDSVIGYECDCAAGFELI 389
Query: 62 SNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIIS 121
D TC D++EC+ PG CSQ+C N KG Y C C+ GY ++ CKA+ + LI +
Sbjct: 390 --DRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPS-LIFT 446
Query: 122 NRHSILVADLEEK---------------GKDHRAQ------------------DIVVSGL 148
NR I LE K D AQ D V +
Sbjct: 447 NRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADVSQKAIFSASIDDKVGRHV 506
Query: 149 DLVE------GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+++ +A DW+ IYW D+ I V +G R L ++ +P + +DP
Sbjct: 507 KMIDNVYNPAAIAVDWVYKTIYWTDAASRTISVATLDGAKRKFLFNSDLREPASIAVDPL 566
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262
G +++W+DWGE +IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL +
Sbjct: 567 SG--FVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 263 DC------------KSLEIKTNVNYSTIFR-KLYWIDEGGNGVPLKIGKANMDGSNASIL 309
KSLE + TIF ++YWID V G GS + L
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAV---YGANKFTGSELATL 681
Query: 310 VS 311
V+
Sbjct: 682 VN 683
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 164/420 (39%), Gaps = 89/420 (21%)
Query: 5 CVNLTKVCDGKTDCPNGADE----------GPG---CDLAECKHKFGLCSNT--CHPTPL 49
C++ ++ C+G DC +G+DE GPG C EC +C+ C
Sbjct: 290 CIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSD 349
Query: 50 GALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109
L C E L N+ G CS +C ++ Y C C G+ L D TC
Sbjct: 350 EPLKECHVNECLVNN-------------GGCSHICKDSVIGYECDCAAGFEL-IDRKTCG 395
Query: 110 AINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSR 169
I+ I S + +L KG ++ + +DL G+ +G + +
Sbjct: 396 DIDECQNPGICSQ----ICINL--KGG-YKCECSRGYQMDLATGVCK-AVGKEPSLIFTN 447
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
I I L + Q R + LD + LFW D + D
Sbjct: 448 RRDIRKIGLERKEYIQL----VEQLRNTVALDADIAAQKLFWADVSQKAIFSASIDDKVG 503
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
R + +Y P + +D +++ +YW D
Sbjct: 504 RHVKMIDNVYNPAAIAVDW------------------------------VYKTIYWTDAA 533
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
+ + A +DG+ L + L E ++A+D +G +Y W+DWGE
Sbjct: 534 SRTISV----ATLDGAKRKFLFNSDLREPASIAVDPLSGFVY-----------WSDWGEP 578
Query: 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
+IE+ GM+G +R +++ I WPNG+TLD+ R+Y+ DSKL + + +G R+ V+
Sbjct: 579 AKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVL 638
>sp|O75197|LRP5_HUMAN Low-density lipoprotein receptor-related protein 5 OS=Homo sapiens
GN=LRP5 PE=1 SV=2
Length = 1615
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 125/244 (51%), Gaps = 48/244 (19%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
Q++V+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + LD
Sbjct: 100 QNVVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALD 159
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 160 PAHG--YMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLS 217
Query: 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALAL 320
FI +AN+DGS +V G L AL
Sbjct: 218 FIH----------------------------------RANLDGSFRQKVVEGSLTHPFAL 243
Query: 321 DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380
L LY WTDW G R I+S +Y P + + R
Sbjct: 244 TLSGDTLY-----------WTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQER 291
Query: 381 RVYF 384
+ +F
Sbjct: 292 QPFF 295
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 138/330 (41%), Gaps = 89/330 (26%)
Query: 75 EQPGYCSQMC--TNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFL-------------- 118
E G CS +C + ++ Y C+C G L+ + TCKA L
Sbjct: 301 EDNGGCSHLCLLSPSEPFYTCACPTGVQLQDNGRTCKAGAEEVLLLARRTDLRRISLDTP 360
Query: 119 --------IISNRHSILV-----------ADLEEKGKDHR------AQDIVVSGLDLVEG 153
+ RH+I + D E + AQ +V + ++ +G
Sbjct: 361 DFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLVNTEINDPDG 420
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW 213
+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR + L P G ++WTDW
Sbjct: 421 IAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIALHPVMGL--MYWTDW 478
Query: 214 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273
GENP+IE +DG R +++ + WPNGL LD+ ++Y+ D+K D
Sbjct: 479 GENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYWGDAKTD------------- 525
Query: 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLK 333
KI N+DG+ L+ +L L +Y
Sbjct: 526 ---------------------KIEVINVDGTKRRTLLEDKLPHIFGFTLLGDFIY----- 559
Query: 334 CTRWLFWTDWGENPRIERIGMDGSNRSTII 363
WTDW + IER+ ++R II
Sbjct: 560 ------WTDW-QRRSIERVHKVKASRDVII 582
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 118 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 166
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 167 ----WTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 222
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 223 NLDGSFRQKVVEGSLTHPFALTLSGD 248
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 119/247 (48%), Gaps = 30/247 (12%)
Query: 33 CKHKFGLCSNTCHPTPLGALCTCPPG-EILSNDSVTCQDMNECEQPGYCSQMCTNTKGSY 91
C + G CS+ C TP C CP G E+LS DM C P +
Sbjct: 605 CADRNGGCSHLCFFTPHATRCGCPIGLELLS-------DMKTCIVPEAFLVFTSRAAIHR 657
Query: 92 ICSCNEGYVLEYDNHTCK----AINHSAAF-LIISNRHSILVADLEEKG------KDHRA 140
I LE +N+ + ++A +SN H I D+ K
Sbjct: 658 IS-------LETNNNDVAIPLTGVKEASALDFDVSNNH-IYWTDVSLKTISRAFMNGSSV 709
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ +V GLD EG+A DW+G ++YW D+ NRIEV +G R VL ++ PR + LD
Sbjct: 710 EHVVEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALD 769
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
P+ G +++WT+WG PRI R MDG+N T++ K+ N LT+D A +R+Y+ D +
Sbjct: 770 PTKG--YIYWTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTN 826
Query: 261 FIDCKSL 267
I+ ++
Sbjct: 827 MIESSNM 833
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 138/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C F
Sbjct: 891 DILVFHSSRQDGLNDCMHNNGQCGQLCLAIPGGHRCGCASHYTLDPSSRNCSP---PTTF 947
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+++ GL V+ + YD + IYW+D R N I
Sbjct: 948 LLFSQKSAISRMIPD------DQHSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQN-I 1000
Query: 174 EVCDENGTNRIVL-----AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT VL ++ QP + +D +R LFWT N I + G
Sbjct: 1001 KRAKDDGTQPFVLTSLSQGQNPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLSGEA 1057
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1058 MGVVLRGDRDKPRAIVVNAERGYLYFTNMQ---------------------------DRA 1090
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A +DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1091 A-----KIERAALDGTEREVLFTTGLIRPVALVVDNTLGK---------LFWVD-ADLKR 1135
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT I + +Y+ D + I+
Sbjct: 1136 IESCDLSGANRLTLEDANIVQPLGLT--ILGKHLYWIDRQQQMIE 1178
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 34/207 (16%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E ++
Sbjct: 655 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVVE 714
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 715 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 770
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 771 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 818
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILID 409
Y+ D + I+ N G+++V++ D
Sbjct: 819 YWTDLDTNMIESSNM--LGQERVVIAD 843
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 139/330 (42%), Gaps = 44/330 (13%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 176 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 235
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 236 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKRTGGKRKEILSA-LYSPMDIQVLSQE 290
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG----------- 297
R+ +F + D C L + + + NG K G
Sbjct: 291 RQPFFHTRCEEDNGGCSHLCLLSPSEPFYTCACPTGVQLQDNGRTCKAGAEEVLLLARRT 350
Query: 298 ---KANMDGSNAS--ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352
+ ++D + + +L + A+A+D Y L+ +++WTD E I R
Sbjct: 351 DLRRISLDTPDFTDIVLQVDDIRHAIAID-------YDPLE--GYVYWTD-DEVRAIRRA 400
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ ++ DL
Sbjct: 401 YLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDL-- 458
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+AL G++Y++ G
Sbjct: 459 ---------DEPRAIALHPVMGLMYWTDWG 479
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N +L +N A +E D ++++ +GL L
Sbjct: 1059 GVVLRGDRDKPRAIVVNAERGYLYFTNMQD-RAAKIERAALDGTEREVLFTTGLIRPVAL 1117
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + + L+W D
Sbjct: 1118 VVDNTLGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPLGLTI----LGKHLYWID-R 1172
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T I ++ G+
Sbjct: 1173 QQQMIERVEKTTGDKRTRIQGRVAHLTGI 1201
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 30/169 (17%)
Query: 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYS 330
++Y + +YW D+ I +A +DGS A LV+ ++ + +A+D
Sbjct: 378 IDYDPLEGYVYWTDDEVRA----IRRAYLDGSGAQTLVNTEINDPDGIAVDW-------- 425
Query: 331 TLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD-SKL 389
R L+WTD G + RIE ++G++R ++S + P + L +Y+ D +
Sbjct: 426 ---VARNLYWTDTGTD-RIEVTRLNGTSRKILVSEDLDEPRAIALHPVMGLMYWTDWGEN 481
Query: 390 DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYY 438
I+ N DG R+ +L++ + + N LALDL+ G LY+
Sbjct: 482 PKIECANLDGQERR--VLVNASLGWPN---------GLALDLQEGKLYW 519
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 306 ASILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTI 362
++I+VSG L +A A+D + G +Y WTD E + + G+ +
Sbjct: 55 STIVVSG-LEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAVQNV 102
Query: 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
+ + + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 103 VISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------D 151
Query: 423 GVPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 152 QPRAIALDPAHGYMYWTDWG 171
>sp|Q91VN0|LRP5_MOUSE Low-density lipoprotein receptor-related protein 5 OS=Mus musculus
GN=Lrp5 PE=1 SV=3
Length = 1614
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 135/275 (49%), Gaps = 55/275 (20%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ+IV+SGL +GLA DW+G +YW DS NRIEV + NGT+R VL ++ QPR + L
Sbjct: 98 AQNIVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIAL 157
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP+ G +++WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL
Sbjct: 158 DPAHG--YMYWTDWGEAPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKL 215
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
FI +AN+DGS +V G L A
Sbjct: 216 SFIH----------------------------------RANLDGSFRQKVVEGSLTHPFA 241
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379
L L LY WTDW G R I+S +Y P +DI
Sbjct: 242 LTLSGDTLY-----------WTDWQTRSIHACNKWTGEQRKEILSA-LYSP----MDI-- 283
Query: 380 RRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
+V + + F C D G + L+ F
Sbjct: 284 -QVLSQERQPPFHTPCEEDNGGCSHLCLLSPREPF 317
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 150/338 (44%), Gaps = 61/338 (18%)
Query: 33 CKHKFGLCSNTCHPTPLGAL--CTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGS 90
C+ G CS+ C +P C CP G L ++ TC+ E+ ++ + S
Sbjct: 298 CEEDNGGCSHLCLLSPREPFYSCACPTGVQLQDNGKTCK--TGAEEVLLLARRTDLRRIS 355
Query: 91 YICSCNEGYVLEY-DNHTCKAINHSA----AFLIISNRHSILVADLEEKGKDHRAQDIVV 145
VL+ D AI++ + +I A L+ G AQ +V
Sbjct: 356 LDTPDFTDIVLQVGDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSG----AQTLVN 411
Query: 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGT 205
+ ++ +G+A DW+ ++YW D+ +RIEV NGT+R +L +++ +PR ++L P G
Sbjct: 412 TEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGL 471
Query: 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCK 265
++WTDWGENP+IE +DG +R +++T + WPNGL LD+ ++Y+ D+K D
Sbjct: 472 --MYWTDWGENPKIECANLDGRDRHVLVNTSLGWPNGLALDLQEGKLYWGDAKTD----- 524
Query: 266 SLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
KI N+DG+ L+ +L L
Sbjct: 525 -----------------------------KIEVINIDGTKRKTLLEDKLPHIFGFTLLGD 555
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+Y WTDW + IER+ ++R II
Sbjct: 556 FIY-----------WTDW-QRRSIERVHKVKASRDVII 581
Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCT 335
+ +KLYW D N +I AN++G++ +L L + A+ALD +G +Y
Sbjct: 117 VGKKLYWTDSETN----RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMY------- 165
Query: 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFC 395
WTDWGE PRIER GMDGS R I+ + IYWPNGLT+D+ +++Y+AD+KL FI
Sbjct: 166 ----WTDWGEAPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 221
Query: 396 NYDGTGRQQVILIDLMVEFTNDLMGD 421
N DG+ RQ+V+ L F L GD
Sbjct: 222 NLDGSFRQKVVEGSLTHPFALTLSGD 247
Score = 108 bits (270), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 122/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL +I + DP G +++WTD E I R +DGS
Sbjct: 351 LRRISLDTPDFTD-IVLQVGDIRHAIAIDYDPLEG--YVYWTD-DEVRAIRRAYLDGSGA 406
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
T+++T+I P+G+ +D + R LYW D G
Sbjct: 407 QTLVNTEINDPDGIAVDW------------------------------VARNLYWTDTGT 436
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G++ ILVS L E A+ L M ++WTDWGENP+I
Sbjct: 437 D----RIEVTRLNGTSRKILVSEDLDEPRAIVLHPVM---------GLMYWTDWGENPKI 483
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
E +DG +R +++T + WPNGL LD+ ++Y+ D+K D I+ N DGT R+ ++
Sbjct: 484 ECANLDGRDRHVLVNTSLGWPNGLALDLQEGKLYWGDAKTDKIEVINIDGTKRKTLLEDK 543
Query: 410 LMVEFTNDLMGD 421
L F L+GD
Sbjct: 544 LPHIFGFTLLGD 555
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 105/230 (45%), Gaps = 46/230 (20%)
Query: 78 GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKD 137
G CS +C T + C C G L D TC AFL+ ++R +I LE D
Sbjct: 609 GGCSHLCFFTPRATKCGCPIGLELLSDMKTCII---PEAFLVFTSRATIHRISLETNNND 665
Query: 138 ----------------------------------------HRAQDIVVSGLDLVEGLAYD 157
+ ++ GLD EG+A D
Sbjct: 666 VAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIEFGLDYPEGMAVD 725
Query: 158 WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP 217
W+G ++YW D+ NRIEV +G R VL ++ PR + LDP+ G +++WT+WG P
Sbjct: 726 WMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTKG--YIYWTEWGGKP 783
Query: 218 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
RI R MDG+N T++ K+ N LT+D A +R+Y+ D + I+ ++
Sbjct: 784 RIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRLYWTDLDTNMIESSNM 832
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 141/345 (40%), Gaps = 67/345 (19%)
Query: 59 EILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAF 117
+IL S +N+C G C Q+C G + C C Y L+ + C + F
Sbjct: 890 DILVFHSSRQDGLNDCVHSNGQCGQLCLAIPGGHRCGCASHYTLDPSSRNCSP---PSTF 946
Query: 118 LIISNRHSI--LVADLEEKGKDHRAQDIVVS--GLDLVEGLAYDWIGGHIYWLDSRLNRI 173
L+ S + +I ++ D D + D+V+ GL V+ + YD + IYW+D R N I
Sbjct: 947 LLFSQKFAISRMIPD------DQLSPDLVLPLHGLRNVKAINYDPLDKFIYWVDGRQN-I 999
Query: 174 EVCDENGTNRIVLAKDNIT-----QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228
+ ++GT +L + + QP + +D +R LFWT N I +DG
Sbjct: 1000 KRAKDDGTQPSMLTSPSQSLSPDRQPHDLSIDIY--SRTLFWTCEATN-TINVHRLDGDA 1056
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288
++ P + ++ +YF + + D
Sbjct: 1057 MGVVLRGDRDKPRAIAVNAERGYMYFTNMQ---------------------------DHA 1089
Query: 289 GNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348
KI +A++DG+ +L + L +AL ++N + LFW D + R
Sbjct: 1090 A-----KIERASLDGTEREVLFTTGLIRPVALVVDNALGK---------LFWVD-ADLKR 1134
Query: 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393
IE + G+NR T+ I P GLT + R +Y+ D + I+
Sbjct: 1135 IESCDLSGANRLTLEDANIVQPVGLT--VLGRHLYWIDRQQQMIE 1177
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 99/212 (46%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N I T + + L D++ +Y+ D L F++ S+E I+
Sbjct: 654 IHRISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIE 713
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I A +DG +LV L +LALD
Sbjct: 714 FGLDYPEGMAVDWMGKNLYWADTGTN----RIEVARLDGQFRQVLVWRDLDNPRSLALDP 769
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG PRI R MDG+N T++ K+ N LT+D A +R+
Sbjct: 770 TKGYIY-----------WTEWGGKPRIVRAFMDGTNCMTLVD-KVGRANDLTIDYADQRL 817
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R VI DL F
Sbjct: 818 YWTDLDTNMIESSNMLGQER-MVIADDLPYPF 848
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 149/366 (40%), Gaps = 80/366 (21%)
Query: 131 LEEKGKDHRAQDIVV-SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
+E G D + I+V S + GL D +YW D++L+ I + +G+ R + +
Sbjct: 175 IERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEG 234
Query: 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249
++T P + L L+WTDW G R I+S +Y P + +
Sbjct: 235 SLTHPFALTLSGDT----LYWTDWQTRSIHACNKWTGEQRKEILSA-LYSPMDIQVLSQE 289
Query: 250 RRVYFADS-KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI-GKANMDGSNAS 307
R+ F + D C L + + R+ ++ GV L+ GK G+
Sbjct: 290 RQPPFHTPCEEDNGGCSHLCLLSP-------REPFYSCACPTGVQLQDNGKTCKTGAEEV 342
Query: 308 ILVS----------------------GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGE 345
+L++ G + A+A+D Y L+ +++WTD E
Sbjct: 343 LLLARRTDLRRISLDTPDFTDIVLQVGDIRHAIAID-------YDPLE--GYVYWTD-DE 392
Query: 346 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405
I R +DGS T+++T+I P+G+ +D R +Y+ D+ D I+ +GT R+ +
Sbjct: 393 VRAIRRAYLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKIL 452
Query: 406 ILIDL------MVEFTNDLM-----GDN---------------------GVP-ALALDLE 432
+ DL ++ LM G+N G P LALDL+
Sbjct: 453 VSEDLDEPRAIVLHPVMGLMYWTDWGENPKIECANLDGRDRHVLVNTSLGWPNGLALDLQ 512
Query: 433 NGMLYY 438
G LY+
Sbjct: 513 EGKLYW 518
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 34/216 (15%)
Query: 208 LFWTDWGENP-RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC-- 264
++WTD E + + G+ I+ + + P+GL D +++Y+ DS+ + I+
Sbjct: 76 VYWTDVSEEAIKQTYLNQTGAAAQNIVISGLVSPDGLACDWVGKKLYWTDSETNRIEVAN 135
Query: 265 -----------KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313
+ L+ + +YW D G +I +A MDGS I+V
Sbjct: 136 LNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGEAP---RIERAGMDGSTRKIIVDSD 192
Query: 314 LY--EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 371
+Y L +DLE LY++ K + I R +DGS R ++ + P
Sbjct: 193 IYWPNGLTIDLEEQKLYWADAKLS------------FIHRANLDGSFRQKVVEGSLTHPF 240
Query: 372 GLTLDIATRRVYFADSKLDFIDFCN-YDGTGRQQVI 406
LTL T +Y+ D + I CN + G R++++
Sbjct: 241 ALTLSGDT--LYWTDWQTRSIHACNKWTGEQRKEIL 274
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 98 GYVLEYDNHTCKAI--NHSAAFLIISNRHSILVADLEEKGKDHRAQDIV-VSGLDLVEGL 154
G VL D +AI N ++ +N A +E D ++++ +GL L
Sbjct: 1058 GVVLRGDRDKPRAIAVNAERGYMYFTNMQD-HAAKIERASLDGTEREVLFTTGLIRPVAL 1116
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG 214
D G ++W+D+ L RIE CD +G NR+ L NI QP G+ + R L+W D
Sbjct: 1117 VVDNALGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPVGLTV----LGRHLYWID-R 1171
Query: 215 ENPRIERIGMDGSNRSTIISTKIYWPNGL 243
+ IER+ ++ T + ++ G+
Sbjct: 1172 QQQMIERVEKTTGDKRTRVQGRVTHLTGI 1200
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 25/139 (17%)
Query: 307 SILVSGQLYEALALDLE--NGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTII 363
S +V+ L +A A+D + G +Y WTD E + + G+ I+
Sbjct: 54 STIVASGLEDAAAVDFQFSKGAVY-----------WTDVSEEAIKQTYLNQTGAAAQNIV 102
Query: 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNG 423
+ + P+GL D +++Y+ DS+ + I+ N +GT R+ + DL +
Sbjct: 103 ISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDL-----------DQ 151
Query: 424 VPALALDLENGMLYYSTEG 442
A+ALD +G +Y++ G
Sbjct: 152 PRAIALDPAHGYMYWTDWG 170
>sp|O88572|LRP6_MOUSE Low-density lipoprotein receptor-related protein 6 OS=Mus musculus
GN=Lrp6 PE=1 SV=1
Length = 1613
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 115/211 (54%), Gaps = 47/211 (22%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKSESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++
Sbjct: 139 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFVIINTEIYWPNGLTLDYQERKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDW 343
L AL L LY WTDW
Sbjct: 223 SLPHPFALTLFEDTLY-----------WTDW 242
Score = 119 bits (298), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 108/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 394 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD +Y+ D+K
Sbjct: 454 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGTIYWGDAKT 511
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 512 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 537
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 538 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREVII 569
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+T+IYWPNGLTLD R++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFVIINTEIYWPNGLTLDYQERKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 110/237 (46%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEDNGGCSHLCLYRPQGLRCACPIGFELIGDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ +
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSDM 820
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 122/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 395 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD +Y+ D+K D I+ N DGTGR+ ++
Sbjct: 472 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGTIYWGDAKTDKIEVMNTDGTGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ + G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSDMLGLNR-EVIADDLPHPF 836
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 151/357 (42%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A + FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PSTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNSIRKAHEDGGQGFNVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
+++ QP + +D +R+++WT N I+ +DG + ++ + P
Sbjct: 1004 ANSVANQNLEIQPYDLSIDIY--SRYIYWTCEATN-VIDVTRLDGRSVGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AIVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPIALALDSKLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 122/323 (37%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE D G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSDMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QAGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPSTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DG ++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-SIRKAHEDGGQGFNVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + ID DG V
Sbjct: 1004 ANSVANQNLEIQPYDLSIDIYSRYIYWTCEATNVIDVTRLDGRSVGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAIVVNPEKGYMYFT 1074
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 23/150 (15%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
L++ A NA+I+V G L +A A+D G ++W+D E I+R
Sbjct: 31 LRLVDATNGKENATIVVGG-LEDAAAVDFVFGH---------GLIYWSDVSEEA-IKRTE 79
Query: 354 MDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412
+ S ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 80 FNKSESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL-- 137
Query: 413 EFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 ---------DQPRAIALDPSSGFMYWTDWG 158
>sp|O75581|LRP6_HUMAN Low-density lipoprotein receptor-related protein 6 OS=Homo sapiens
GN=LRP6 PE=1 SV=2
Length = 1613
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 117/214 (54%), Gaps = 47/214 (21%)
Query: 133 EKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT 192
E K Q++VVSGL +GLA DW+G +YW DS NRIEV + +G+ R VL +
Sbjct: 79 EFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD 138
Query: 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 252
QPR + LDPS G +++WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++
Sbjct: 139 QPRAIALDPSSG--FMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKL 196
Query: 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312
Y+AD+KL+FI K+N+DG+N +V G
Sbjct: 197 YWADAKLNFIH----------------------------------KSNLDGTNRQAVVKG 222
Query: 313 QLYEALALDLENGMLYYSTLKCTRWLFWTDWGEN 346
L AL L +LY WTDW +
Sbjct: 223 SLPHPFALTLFEDILY-----------WTDWSTH 245
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 48/224 (21%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
+Q +V + + +G+A DW+ ++YW D+ +RIEV NGT R +L +++ +PR ++L
Sbjct: 394 SQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVL 453
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
DP G +++WTDWGE P+IER +DGS+R +++T + WPNGL LD ++Y+ D+K
Sbjct: 454 DPMVG--YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKT 511
Query: 260 DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALA 319
D KI N DG+ +LV ++
Sbjct: 512 D----------------------------------KIEVMNTDGTGRRVLVEDKIPHIFG 537
Query: 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
L +Y WTDW + IER+ + R II
Sbjct: 538 FTLLGDYVY-----------WTDW-QRRSIERVHKRSAEREVII 569
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 47/237 (19%)
Query: 72 NEC-EQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD 130
N C E+ G CS +C C+C G+ L D TC AFL+ S R I
Sbjct: 590 NPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV---PEAFLLFSRRADIRRIS 646
Query: 131 LEEKG----------KDHRAQD------------------------------IVVSGLDL 150
LE K+ A D +V GLD
Sbjct: 647 LETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 706
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
EG+A DW+G ++YW D+ NRIEV +G +R VL ++ PR + LDP+ G +++W
Sbjct: 707 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYW 764
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
T+WG P+I+R MDGS R+T++ + NGLT+D A RR+Y+ D + I+ ++
Sbjct: 765 TEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 820
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 86/143 (60%), Gaps = 17/143 (11%)
Query: 281 KLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENGMLYYSTLKCTRWL 338
KLYW D N +I +N+DGS +L +L + A+ALD +G +Y
Sbjct: 108 KLYWTDSETN----RIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY---------- 153
Query: 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398
WTDWGE P+IER GMDGS+R II+++IYWPNGLTLD +++Y+AD+KL+FI N D
Sbjct: 154 -WTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 212
Query: 399 GTGRQQVILIDLMVEFTNDLMGD 421
GT RQ V+ L F L D
Sbjct: 213 GTNRQAVVKGSLPHPFALTLFED 235
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229
L RI + + T+ IVL ++I + DP G +++WTD E I R +DGS
Sbjct: 339 LRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEG--YIYWTD-DEVRAIRRSFIDGSGS 394
Query: 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289
+++ +I P+G+ +D + R LYW D G
Sbjct: 395 QFVVTAQIAHPDGIAVDW------------------------------VARNLYWTDTGT 424
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ +I ++G+ IL+S L E A+ L+ + Y ++WTDWGE P+I
Sbjct: 425 D----RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGY---------MYWTDWGEIPKI 471
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
ER +DGS+R +++T + WPNGL LD ++Y+ D+K D I+ N DGTGR+ ++
Sbjct: 472 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDK 531
Query: 410 LMVEFTNDLMGD 421
+ F L+GD
Sbjct: 532 IPHIFGFTLLGD 543
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 33/212 (15%)
Query: 219 IERIGMDGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLD-----FIDCKSLE--IK 270
I RI ++ +N + I T + + L D+ R+Y+ D L F++ +LE ++
Sbjct: 642 IRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 701
Query: 271 TNVNYST------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDL 322
++Y + + LYW D G N +I + +DG + +LV L ALALD
Sbjct: 702 FGLDYPEGMAVDWLGKNLYWADTGTN----RIEVSKLDGQHRQVLVWKDLDSPRALALDP 757
Query: 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382
G +Y WT+WG P+I+R MDGS R+T++ + NGLT+D A RR+
Sbjct: 758 AEGFMY-----------WTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRL 805
Query: 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
Y+ D + I+ N G R +VI DL F
Sbjct: 806 YWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 836
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 72 NECEQP-GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVA 129
NEC G+CS +C G ++C C Y L DN TC A FL+ S + +I
Sbjct: 891 NECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQKSAINRM 947
Query: 130 DLEEKGKDHRAQDIV--VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA 187
++E+ ++ DI+ + L V + YD + +YW+DSR N I E+G+ +
Sbjct: 948 VIDEQ----QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVV 1003
Query: 188 KDNIT------QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPN 241
++ QP + +D +R+++WT N I +DG + ++ + P
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIY--SRYIYWTCEATN-VINVTRLDGRSVGVVLKGEQDRPR 1060
Query: 242 GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301
+ ++ +YF TN+ + KI +A +
Sbjct: 1061 AVVVNPEKGYMYF----------------TNLQERSP----------------KIERAAL 1088
Query: 302 DGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361
DG+ +L L + +AL L++ + LFW D + RIE + G+NR
Sbjct: 1089 DGTEREVLFFSGLSKPIALALDSRLGK---------LFWAD-SDLRRIESSDLSGANRIV 1138
Query: 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418
+ + I P GLT + +Y+ D + I+ D TGR+ + + +D+
Sbjct: 1139 LEDSNILQPVGLT--VFENWLYWIDKQQQMIE--KIDMTGREGRTKVQARIAQLSDI 1191
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 131 LEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN 190
++ D + +V + GL D+ +YW D N IE + G NR V+A D+
Sbjct: 773 IDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA-DD 831
Query: 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 250
+ P G+ + +++WTDW IER TII + + + + ++R
Sbjct: 832 LPHPFGL----TQYQDYIYWTDWSRR-SIERANKTSGQNRTIIQGHLDYVMDILVFHSSR 886
Query: 251 RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN---GVPLKIGKANMDGSNAS 307
+ + + C L + V ++ N P + +
Sbjct: 887 QSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINR 946
Query: 308 ILVSGQLYEALALDLEN----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363
+++ Q + L + + + Y L + L+W D +N I + DGS T++
Sbjct: 947 MVIDEQQSPDIILPIHSLRNVRAIDYDPLD--KQLYWIDSRQN-MIRKAQEDGSQGFTVV 1003
Query: 364 STKI------YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND 417
+ + P L++DI +R +Y+ + I+ DG V
Sbjct: 1004 VSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSVGVV------------ 1051
Query: 418 LMGDNGVP-ALALDLENGMLYYS 439
L G+ P A+ ++ E G +Y++
Sbjct: 1052 LKGEQDRPRAVVVNPEKGYMYFT 1074
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 27/152 (17%)
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIER 351
L++ A NA+I+V G L +A A+D +G++Y W+D E I+R
Sbjct: 31 LRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIY-----------WSDVSEEA-IKR 77
Query: 352 IGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410
+ + ++ + + P+GL D ++Y+ DS+ + I+ N DG+ R+ + +L
Sbjct: 78 TEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL 137
Query: 411 MVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442
+ A+ALD +G +Y++ G
Sbjct: 138 -----------DQPRAIALDPSSGFMYWTDWG 158
>sp|Q9BEA0|EGF_CANFA Pro-epidermal growth factor OS=Canis familiaris GN=EGF PE=2 SV=1
Length = 1216
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 134/282 (47%), Gaps = 48/282 (17%)
Query: 29 DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQP--GYCSQMCTN 86
L C CS+ C T G +C CP G +L D TC C P G CSQ+C
Sbjct: 399 QLIACPSNTSKCSHDCVLTSDGPICFCPEGSVLEADGKTCSG---CSSPDNGGCSQLCLP 455
Query: 87 -TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI------------------- 126
+ S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 456 LSPVSWECGCFPGYDLQLDKQSCAA-SGPQPFLLFANSQDIRHMHFDGTDYGTLLSQQMG 514
Query: 127 LVADLEEKGKDHR--------------------AQDIVVSGLDLVEGLAYDWIGGHIYWL 166
+V L+ +++ + ++ G+D+ EGLA DWI YW
Sbjct: 515 MVFALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEGVDVPEGLAIDWIDRKFYWT 574
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226
DS + IE D NG +R ++ K++I+QPRG+ + P + LFWTD G NPRIE + G
Sbjct: 575 DSGKSLIEGSDLNGKHREIIIKEDISQPRGIAVHPM--AKRLFWTDMGINPRIESSSLQG 632
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
R I S+ + WP+G+T+D T ++Y+ D+KL I+ +L+
Sbjct: 633 IGRLVIASSDLVWPSGITIDYVTDKLYWCDTKLSVIEMANLD 674
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 175/428 (40%), Gaps = 79/428 (18%)
Query: 29 DLAECKHKFGLC-SNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTN 86
D CK K G C +TC CTC G LS D C+D+NEC + C+ C N
Sbjct: 316 DQKLCKWKQGNCRGSTCGQDSKSYSCTCAEGYTLSQDGKYCEDVNECAFWNHGCTLGCEN 375
Query: 87 TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD-----------LEEKG 135
GSY C+C G++L D C + + + +L +D LE G
Sbjct: 376 IPGSYYCTCPVGFILLPDGKRCHQLIACPSNTSKCSHDCVLTSDGPICFCPEGSVLEADG 435
Query: 136 KDHRAQDIVVSG--LDLVEGLA-YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN-- 190
K +G L L+ W G D +L++ + C +G +L ++
Sbjct: 436 KTCSGCSSPDNGGCSQLCLPLSPVSWECGCFPGYDLQLDK-QSCAASGPQPFLLFANSQD 494
Query: 191 --------------ITQPRGMM--LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS 234
++Q GM+ LD P +++ IER MDGS R +I
Sbjct: 495 IRHMHFDGTDYGTLLSQQMGMVFALDHDPVENKIYFAHTALK-WIERANMDGSQRERLIE 553
Query: 235 TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294
+ P GL +D+ID RK YW D G +
Sbjct: 554 EGVDVPEGLA--------------IDWID----------------RKFYWTDSGKS---- 579
Query: 295 KIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM 354
I ++++G + I++ + + + + + LFWTD G NPRIE +
Sbjct: 580 LIEGSDLNGKHREIIIKEDISQPRGIAVH---------PMAKRLFWTDMGINPRIESSSL 630
Query: 355 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEF 414
G R I S+ + WP+G+T+D T ++Y+ D+KL I+ N DG+ RQ++ D+ F
Sbjct: 631 QGIGRLVIASSDLVWPSGITIDYVTDKLYWCDTKLSVIEMANLDGSKRQRLAQNDVGHPF 690
Query: 415 TNDLMGDN 422
+ D+
Sbjct: 691 AMAVFEDH 698
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 113/264 (42%), Gaps = 39/264 (14%)
Query: 115 AAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIE 174
A FLI S+ SI DLE G +H Q + +G+ ++ Y+ IYW+D ++
Sbjct: 45 APFLIFSHGISIFRIDLE--GTNHE-QLVADAGVSVIMDFHYN--KERIYWVDPERQLLQ 99
Query: 175 VCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRW----LFWTDWGENPRIERIGMDGSN 228
NGT R+ + N++ GM ++ W L W++ E I M G+N
Sbjct: 100 RVFLNGTRQERVCNIEKNVS---GMAIN------WINEELIWSNQQEG-IITVTDMKGNN 149
Query: 229 RSTIISTKIYWPNGLTLDIATRRVYFADS-----KLDFIDCKSLEIK---------TNVN 274
S ++ + +P + +D R ++++ L D +E K T V+
Sbjct: 150 -SRVLLRALNYPANVAIDPIERFIFWSSEVAVAGSLHRADLNGVEEKILLQTSERITAVS 208
Query: 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYST-LK 333
+ ++L+WI +G I N DG + + + A+ L ++YST K
Sbjct: 209 LDVLDKQLFWIQYSRDGSNSHIYSCNYDGGSVHLSKHLTQHNFFAMSLFGNQIFYSTWKK 268
Query: 334 CTRWLFWTDWGENPRIERIGMDGS 357
T W+ G++ + RI +D S
Sbjct: 269 KTIWIANKHSGKD--MVRINLDSS 290
Score = 37.4 bits (85), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNECEQ-----PGYCSQMCTNTKGSYICSCNEGY 99
A C C G + D C D++ECE P S+ C NT+G Y+C C+EGY
Sbjct: 856 ATCQCLKG--FTGDGKLCFDIDECEMGITICPPTSSK-CVNTEGGYVCQCSEGY 906
Score = 36.2 bits (82), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 29 DLAECKHKFGLC---SNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQ-- 82
D+ EC+ +C S+ C T G +C C G D + C D+NEC+ + C +
Sbjct: 873 DIDECEMGITICPPTSSKCVNTEGGYVCQCSEG--YRGDGIHCLDINECQLGMHTCGENA 930
Query: 83 MCTNTKGSYICSC 95
CTN +G+Y C C
Sbjct: 931 TCTNMEGNYTCMC 943
>sp|P01133|EGF_HUMAN Pro-epidermal growth factor OS=Homo sapiens GN=EGF PE=1 SV=2
Length = 1207
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 137/297 (46%), Gaps = 52/297 (17%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C L C CS+ C T G LC CP G +L D TC +
Sbjct: 382 CPVGFVLLPDGKRCHQLVSCPRNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTC---SG 438
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---- 126
C P G CSQ+C + S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 439 CSSPDNGGCSQLCVPLSPVSWECDCFPGYDLQLDEKSCAA-SGPQPFLLFANSQDIRHMH 497
Query: 127 ---------------LVADLEEKGKDHR--------------------AQDIVVSGLDLV 151
+V L+ +++ + ++ G+D+
Sbjct: 498 FDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEGVDVP 557
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EGLA DWIG YW D + I D NG ++ K+NI+QPRG+ + P + LFWT
Sbjct: 558 EGLAVDWIGRRFYWTDRGKSLIGRSDLNGKRSKIITKENISQPRGIAVHPM--AKRLFWT 615
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
D G NPRIE + G R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 616 DTGINPRIESSSLQGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLD 672
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 171/428 (39%), Gaps = 89/428 (20%)
Query: 33 CKHKFGLCSNT-CHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGS 90
CK + G CS+T C LC C G LS D C+D+NEC + C+ C NT GS
Sbjct: 318 CKLRKGNCSSTVCGQDLQSHLCMCAEGYALSRDRKYCEDVNECAFWNHGCTLGCKNTPGS 377
Query: 91 YICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD-----------LEEKGK--- 136
Y C+C G+VL D C + + + +L ++ LE GK
Sbjct: 378 YYCTCPVGFVLLPDGKRCHQLVSCPRNVSECSHDCVLTSEGPLCFCPEGSVLERDGKTCS 437
Query: 137 -----DHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN- 190
D+ + L V D G+ LD + C +G +L ++
Sbjct: 438 GCSSPDNGGCSQLCVPLSPVS-WECDCFPGYDLQLDEK-----SCAASGPQPFLLFANSQ 491
Query: 191 ---------------ITQPRGMM--LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
++Q GM+ LD P +++ IER MDGS R +I
Sbjct: 492 DIRHMHFDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALK-WIERANMDGSQRERLI 550
Query: 234 STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293
+ P GL +D I R+ YW D G +
Sbjct: 551 EEGVDVPEGLAVDW------------------------------IGRRFYWTDRGKS--- 577
Query: 294 LKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353
IG+++++G + I+ + + + + + LFWTD G NPRIE
Sbjct: 578 -LIGRSDLNGKRSKIITKENISQPRGIAVH---------PMAKRLFWTDTGINPRIESSS 627
Query: 354 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVE 413
+ G R I S+ + WP+G+T+D T ++Y+ D+K I+ N DG+ R+++ D+
Sbjct: 628 LQGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLDGSKRRRLTQNDVGHP 687
Query: 414 FTNDLMGD 421
F + D
Sbjct: 688 FAVAVFED 695
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 37/258 (14%)
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEG 153
SC EG + N TC A FLI S+ +SI D E G ++ Q +V +G+ ++
Sbjct: 27 SCPEGTLAGNGNSTCVG---PAPFLIFSHGNSIFRIDTE--GTNYE-QLVVDAGVSVIMD 80
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRWL--- 208
Y+ IYW+D ++ NG+ R+ + N++ GM ++ W+
Sbjct: 81 FHYN--EKRIYWVDLERQLLQRVFLNGSRQERVCNIEKNVS---GMAIN------WINEE 129
Query: 209 -FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--------SKL 259
W++ E I M G+N S I+ + + +P + +D R ++++ + L
Sbjct: 130 VIWSNQQEG-IITVTDMKGNN-SHILLSALKYPANVAVDPVERFIFWSSEVAGSLYRADL 187
Query: 260 DFIDCKSL----EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
D + K+L E T V+ + ++L+WI G I + DG + I +
Sbjct: 188 DGVGVKALLETSEKITAVSLDVLDKRLFWIQYNREGSNSLICSCDYDGGSVHISKHPTQH 247
Query: 316 EALALDLENGMLYYSTLK 333
A+ L ++YST K
Sbjct: 248 NLFAMSLFGDRIFYSTWK 265
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 10/55 (18%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNECEQ------PGYCSQMCTNTKGSYICSCNEGY 99
A C C G + D C D++ECE P S C NT+G Y+C C+EGY
Sbjct: 853 ATCQCLKG--FAGDGKLCSDIDECEMGVPVCPPA--SSKCINTEGGYVCRCSEGY 903
Score = 37.4 bits (85), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 4 RCVNLTKVCDGKTDCPNG-ADEGPGC-DLAECKHKFGLC---SNTCHPTPLGALCTCPPG 58
RC++ + D C G A +G C D+ EC+ +C S+ C T G +C C G
Sbjct: 845 RCISEGE--DATCQCLKGFAGDGKLCSDIDECEMGVPVCPPASSKCINTEGGYVCRCSEG 902
Query: 59 EILSNDSVTCQDMNECEQPGY-CSQ--MCTNTKGSYICSC 95
D + C D++EC+ + C + CTNT+G Y C C
Sbjct: 903 --YQGDGIHCLDIDECQLGEHSCGENASCTNTEGGYTCMC 940
Score = 32.7 bits (73), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 76 QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAIN 112
Q G C +C G+ CSC EG++ D TC A++
Sbjct: 748 QNGGCEHICKKRLGTAWCSCREGFMKASDGKTCLALD 784
>sp|P07522|EGF_RAT Pro-epidermal growth factor OS=Rattus norvegicus GN=Egf PE=1 SV=2
Length = 1133
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 139/299 (46%), Gaps = 55/299 (18%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C +L C CS+ C T G LC CP G +L D TC +
Sbjct: 383 CPTGFVLLPDGKRCHELVACPGNRSECSHDCILTSDGPLCICPAGSVLGKDGKTCTGCSF 442
Query: 74 CEQPGYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN----RHS--- 125
+ G CSQ+C + S+ C C GY L+ D +C A FL+ +N RH
Sbjct: 443 SDNGG-CSQICLPLSLASWECDCFPGYDLQLDRKSCAASMGPQPFLLFANSQDIRHMHFD 501
Query: 126 ------------------------------------ILVADLEEKGKDHRAQDIVVSGLD 149
I A+L+ ++ R + G+D
Sbjct: 502 GTDYKTLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANLDGSQRERR----ITEGVD 557
Query: 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLF 209
EGLA DWIG IYW DS + IE D +G + ++ K++I++PRG+ + P R LF
Sbjct: 558 TPEGLAVDWIGRRIYWTDSGKSVIEGSDLSGKHHQIIIKESISRPRGIAVHPK--ARRLF 615
Query: 210 WTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
WTD G +PRIE + GS+R+ I S+ + P+G+ +D T +Y+ D+KL I+ L+
Sbjct: 616 WTDTGMSPRIESSSLQGSDRTLIASSNLLEPSGIAIDYLTDTLYWCDTKLSVIEMADLD 674
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 26/217 (11%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST- 277
I + DG++ T++S ++ L D ++YFA + L +I+ +L+ T
Sbjct: 495 IRHMHFDGTDYKTLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANLDGSQRERRITE 554
Query: 278 ------------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
I R++YW D G + I +++ G + I++ + + +
Sbjct: 555 GVDTPEGLAVDWIGRRIYWTDSGKS----VIEGSDLSGKHHQIIIKESISRPRGIAVHPK 610
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
R LFWTD G +PRIE + GS+R+ I S+ + P+G+ +D T +Y+
Sbjct: 611 ---------ARRLFWTDTGMSPRIESSSLQGSDRTLIASSNLLEPSGIAIDYLTDTLYWC 661
Query: 386 DSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
D+KL I+ + DG+ R+++ D+ F+ + D+
Sbjct: 662 DTKLSVIEMADLDGSKRRRLTQNDVGHPFSLAVFEDH 698
Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 160/448 (35%), Gaps = 76/448 (16%)
Query: 19 PNGADEGPGCDLAECKHKFGLC-SNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECE-Q 76
P + D CK + G C + P C G LS D C+D+NEC Q
Sbjct: 305 PGTENRAQASDSERCKQRRGQCLYSLSERDPNSDSSACAEGYTLSRDRKYCEDVNECALQ 364
Query: 77 PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD------ 130
C+ C N GSY C+C G+VL D C + + IL +D
Sbjct: 365 NHGCTLGCENIPGSYYCTCPTGFVLLPDGKRCHELVACPGNRSECSHDCILTSDGPLCIC 424
Query: 131 -----LEEKGKDHRAQDIVVSG-----------------------LDLVEGLAYDWIGGH 162
L + GK +G L L +G
Sbjct: 425 PAGSVLGKDGKTCTGCSFSDNGGCSQICLPLSLASWECDCFPGYDLQLDRKSCAASMGPQ 484
Query: 163 IYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT--DWGENPRIE 220
+ L + I +GT+ L + + DP + T W E
Sbjct: 485 PFLLFANSQDIRHMHFDGTDYKTLLSRQMGMVFALDYDPVESKIYFAQTALKWIE----- 539
Query: 221 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN-------- 272
R +DGS R I+ + P GL +D RR+Y+ DS I+ L K +
Sbjct: 540 RANLDGSQRERRITEGVDTPEGLAVDWIGRRIYWTDSGKSVIEGSDLSGKHHQIIIKESI 599
Query: 273 -----VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENG 325
+ R+L+W D G+ +I +++ GS+ +++ S L E +A+D
Sbjct: 600 SRPRGIAVHPKARRLFWTD---TGMSPRIESSSLQGSDRTLIASSNLLEPSGIAIDYLTD 656
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
LY+ K + IE +DGS R + + P +L + V+F+
Sbjct: 657 TLYWCDTKLS------------VIEMADLDGSKRRRLTQNDVGHP--FSLAVFEDHVWFS 702
Query: 386 DSKLDFIDFCNYDGTGRQQVILIDLMVE 413
D + + N TG+ +V L M++
Sbjct: 703 DWAIPSVIRVNKR-TGQNRVRLRGSMLK 729
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 40/207 (19%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
V GLA +WI G I D I V D NG N VL ++ +P +++DP+ R +FW
Sbjct: 119 VSGLAINWIDGEILRTDRWKGVITVTDMNGNNSRVLLS-SLKRPANILVDPT--ERLIFW 175
Query: 211 TD--WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
+ G R + GMD + T + P +++ I LD +D
Sbjct: 176 SSVVTGNLHRADLGGMD-------VKTLLEAPERISVLI-----------LDILD----- 212
Query: 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLY 328
++L+W +G G I + +G + + ++ L + + +
Sbjct: 213 -----------KRLFWAQDGREGSHGYIHSCDYNGGSIHHIRHQARHDLLTMAIFGDKIL 261
Query: 329 YSTLKCTRWLFWTDWGENPRIERIGMD 355
YS LK + ++ D + R+ +D
Sbjct: 262 YSALK-EKAIWIADKHTGKNVVRVNLD 287
Score = 39.7 bits (91), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 38 GLCSNTCHPTPLG--ALCTCPPGEILSNDSVTCQDMNECEQPGY----CSQMCTNTKGSY 91
G C + H G A+C C G + D C D++ECE S C NT+G Y
Sbjct: 842 GGCGSHAHCISEGEAAVCQCLKG--FAGDGNLCSDIDECELGSSDCPPTSSRCINTEGGY 899
Query: 92 ICSCNEGY 99
+C C+EGY
Sbjct: 900 VCQCSEGY 907
Score = 39.7 bits (91), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 29 DLAECKHKFGLC---SNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQ-- 82
D+ EC+ C S+ C T G +C C G D + C D++EC+Q + CS+
Sbjct: 874 DIDECELGSSDCPPTSSRCINTEGGYVCQCSEG--YEGDGIYCLDVDECQQGSHGCSENA 931
Query: 83 MCTNTKGSYICSC 95
CTNT+G Y C+C
Sbjct: 932 TCTNTEGGYNCTC 944
>sp|Q00968|EGF_PIG Pro-epidermal growth factor OS=Sus scrofa GN=EGF PE=1 SV=2
Length = 1214
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 136/297 (45%), Gaps = 52/297 (17%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C L C CS+ C T G +C CP +L D TC
Sbjct: 382 CPAGFVLLPDGKRCHQLISCPSNVSECSHDCVLTSDGPICFCPEDSVLEADGKTCSG--- 438
Query: 74 CEQP--GYCSQMCTN-TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI---- 126
C P G CSQ+C + ++ C C GY L+ D +C+A + FL+ +N I
Sbjct: 439 CSSPDNGGCSQLCLPLSPVTWECGCFPGYDLQLDKKSCRA-SGPPPFLLFANSQDIRHMH 497
Query: 127 ---------------LVADLEEKGKDHRA--------------------QDIVVSGLDLV 151
+V L+ +++ + + +D+
Sbjct: 498 FDGTDYETLLNQQIGMVLALDHDPVENKVYFAHTALKWIERANMDGSQRERLFEEAVDVP 557
Query: 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWT 211
EGLA DWIG YW D + IE D NG R ++ K++I+QPRG+ + P + LFWT
Sbjct: 558 EGLAIDWIGRKFYWTDRGRSLIEGSDLNGKYREIIIKEDISQPRGIAVHPV--AKRLFWT 615
Query: 212 DWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
D G NPRIE + G R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 616 DMGTNPRIESSSLQGIGRQVIASSDLVWPSGITIDYLTDKLYWCDAKQSVIEMSNLD 672
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 178/433 (41%), Gaps = 69/433 (15%)
Query: 19 PNGADEGPGCDLAECKHKFGLCSNT-CHPTPLGALCTCPPGEILSNDSVTCQDMNECEQP 77
P + D CK + G C + C P +CTC G LS D C+D+NEC
Sbjct: 304 PKAEGDAWASDQKLCKLRKGNCRGSMCGQEPKSHVCTCAEGYTLSQDGRKCEDVNECAFW 363
Query: 78 GY-CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD------ 130
+ C+ C NT GSY C+C G+VL D C + + + + +L +D
Sbjct: 364 NHGCTLGCENTPGSYYCTCPAGFVLLPDGKRCHQLISCPSNVSECSHDCVLTSDGPICFC 423
Query: 131 -----LEEKGKDHRAQDIVVSG--LDLVEGLA-YDWIGGHIYWLDSRLNRIEVCDENGTN 182
LE GK +G L L+ W G D +L++ + C +G
Sbjct: 424 PEDSVLEADGKTCSGCSSPDNGGCSQLCLPLSPVTWECGCFPGYDLQLDK-KSCRASGPP 482
Query: 183 RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 242
+L + + I + DG++ T+++ +I
Sbjct: 483 PFLL--------------------------FANSQDIRHMHFDGTDYETLLNQQIGMVLA 516
Query: 243 LTLDIATRRVYFADSKLDFIDC-------------KSLEIKTNVNYSTIFRKLYWIDEGG 289
L D +VYFA + L +I+ +++++ + I RK YW D G
Sbjct: 517 LDHDPVENKVYFAHTALKWIERANMDGSQRERLFEEAVDVPEGLAIDWIGRKFYWTDRGR 576
Query: 290 NGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349
+ I ++++G I++ + + + + + LFWTD G NPRI
Sbjct: 577 S----LIEGSDLNGKYREIIIKEDISQPRGIAVH---------PVAKRLFWTDMGTNPRI 623
Query: 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409
E + G R I S+ + WP+G+T+D T ++Y+ D+K I+ N DG+ RQ++ D
Sbjct: 624 ESSSLQGIGRQVIASSDLVWPSGITIDYLTDKLYWCDAKQSVIEMSNLDGSRRQRLAQND 683
Query: 410 LMVEFTNDLMGDN 422
+ F + D+
Sbjct: 684 VGHPFAVAVFEDH 696
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 37/258 (14%)
Query: 94 SCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEG 153
+C EG N TC A FLI S+ +SI DLE G +H Q + +G+ ++
Sbjct: 27 NCPEGSPSGNGNATCVG---PAPFLIFSHGNSIFRIDLE--GTNHE-QLVADAGISVLMD 80
Query: 154 LAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLAKDNITQPRGMMLDPSPGTRW---- 207
Y+ IYW+D ++ NGT ++ + N++ GM ++ W
Sbjct: 81 FHYN--EERIYWVDLERQLLQRVFLNGTRQEKVCNLEKNVS---GMAIN------WINEE 129
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD---SKLDFIDC 264
L W++ E I M G+N ++S + +P + +D R ++++ L D
Sbjct: 130 LIWSNQQEG-TITVTDMKGNNSRVLLSA-LKYPANVAVDPVERLMFWSSVVAGSLHRADV 187
Query: 265 KSLEIK---------TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY 315
+E++ V+ + ++L+WI G +I + DG + +
Sbjct: 188 TGVEVRLLLETSEEIAAVSLDVLDKRLFWIQYNREGGSSRICSCDYDGGSVHFSKHLTQH 247
Query: 316 EALALDLENGMLYYSTLK 333
A+ L ++YST K
Sbjct: 248 NVFAMSLFGDHIFYSTWK 265
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 4 RCVNLTKVCDGKTDCPNG-ADEGPGC-DLAECKHKFGLC---SNTCHPTPLGALCTCPPG 58
RCV T+ D C G A +G C D+ EC+ +C S+ C T G +C C G
Sbjct: 845 RCV--TEGEDATCQCLKGFAGDGNLCSDIDECELGTSVCPPTSSECINTEGGHVCRCSEG 902
Query: 59 EILSNDSVTCQDMNECEQPGY-CSQ--MCTNTKGSYICSC 95
D + C D++EC+ + C + CTNT+G+Y C+C
Sbjct: 903 --YQGDGIHCLDIDECQLGVHTCGENATCTNTEGNYTCTC 940
Score = 35.8 bits (81), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNECE-QPGYC---SQMCTNTKGSYICSCNEGY 99
A C C G + D C D++ECE C S C NT+G ++C C+EGY
Sbjct: 853 ATCQCLKG--FAGDGNLCSDIDECELGTSVCPPTSSECINTEGGHVCRCSEGY 903
>sp|Q95ND4|EGF_FELCA Pro-epidermal growth factor OS=Felis catus GN=EGF PE=2 SV=1
Length = 1210
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 129/282 (45%), Gaps = 48/282 (17%)
Query: 29 DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQP--GYCSQMCTN 86
L C CS+ C T G +C CP G +L D TC C P G CSQ+C
Sbjct: 394 QLISCPSNTSKCSHDCVLTSDGPICFCPEGSVLETDGKTCSG---CSSPDNGGCSQLCLP 450
Query: 87 -TKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSI------------------- 126
+ S+ C C GY L+ D +C A + FL+ +N I
Sbjct: 451 LSPVSWECGCFPGYDLQLDKKSCAA-SGPQPFLLFANSQDIRHVRFDGTDYGSLLSQQMG 509
Query: 127 LVADLEEKGKDHR--------------------AQDIVVSGLDLVEGLAYDWIGGHIYWL 166
+V L+ +++ + ++ +D+ EGLA DWI YW
Sbjct: 510 MVFALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEAVDVPEGLAIDWIDRKFYWT 569
Query: 167 DSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226
D IE D NG +R ++ K+ ++QPRG+ + P + LFWTD G NPRIE + G
Sbjct: 570 DRGKALIEGSDLNGKHREIIIKEEVSQPRGIAVHPM--AKRLFWTDMGINPRIESSSLQG 627
Query: 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268
R I S+ + WP+G+T+D T ++Y+ D+K I+ +L+
Sbjct: 628 IGRRVIASSDLVWPSGITIDYLTDKLYWCDAKQSVIEMANLD 669
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 173/431 (40%), Gaps = 80/431 (18%)
Query: 25 GPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQM 83
PG L C K + C LCTC G LS D C+D+NEC + C+
Sbjct: 310 APGQKL--CLRKGNCTGSVCEQDSKSHLCTCAEGYTLSPDGKHCEDVNECAFWNHGCTLG 367
Query: 84 CTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVAD-----------LE 132
C N GSY C+C G++L D C + + + +L +D LE
Sbjct: 368 CENIPGSYYCTCPVGFILLPDGKRCHQLISCPSNTSKCSHDCVLTSDGPICFCPEGSVLE 427
Query: 133 EKGKDHRAQDIVVSG--LDLVEGLA-YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD 189
GK +G L L+ W G D +L++ + C +G +L +
Sbjct: 428 TDGKTCSGCSSPDNGGCSQLCLPLSPVSWECGCFPGYDLQLDK-KSCAASGPQPFLLFAN 486
Query: 190 N----------------ITQPRGMM--LDPSPGTRWLFWTDWGENPRIERIGMDGSNRST 231
+ ++Q GM+ LD P +++ IER MDGS R
Sbjct: 487 SQDIRHVRFDGTDYGSLLSQQMGMVFALDHDPVENKIYFAHTALK-WIERANMDGSQRER 545
Query: 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291
+I + P GL +D+ID RK YW D G
Sbjct: 546 LIEEAVDVPEGLA--------------IDWID----------------RKFYWTDRG--- 572
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
I ++++G + I++ ++ + + + + LFWTD G NPRIE
Sbjct: 573 -KALIEGSDLNGKHREIIIKEEVSQPRGIAVH---------PMAKRLFWTDMGINPRIES 622
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
+ G R I S+ + WP+G+T+D T ++Y+ D+K I+ N DG+ RQ++ D+
Sbjct: 623 SSLQGIGRRVIASSDLVWPSGITIDYLTDKLYWCDAKQSVIEMANLDGSKRQRLAQNDVG 682
Query: 412 VEFTNDLMGDN 422
F + D+
Sbjct: 683 HPFAIAVFEDH 693
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 111/279 (39%), Gaps = 42/279 (15%)
Query: 95 CNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGL 154
C+EG N TC FLI S+ SI DL+ + D VS + +
Sbjct: 28 CSEGSSSGKGNSTCVG---PEPFLIFSHGGSIFRIDLDGTNYEQLVADAGVSVI-----M 79
Query: 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA--KDNITQPRGMMLDPSPGTRW----L 208
+ + +YW+D ++ NGT + + + N++ GM ++ W L
Sbjct: 80 DFHYYKERLYWVDLERQLLQRVFLNGTRQETVCNIEKNVS---GMAIN------WINEEL 130
Query: 209 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS---KLDFIDCK 265
W++ E I M G+N ++S + +P + +D R ++++ L D
Sbjct: 131 IWSNQQEG-IITVTDMKGNNSRVLLSA-LKYPANVAIDPVERFIFWSSEVAGSLHRADLN 188
Query: 266 SLEIK---------TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE 316
+E+K T V+ + ++L+WI +G I N DG + +
Sbjct: 189 GVEVKILLETSERITAVSLDVLDKRLFWIQNNRDGSNSYICSCNYDGGSVHFNKHLTQHS 248
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD 355
A+ L ++YST W T W N R + + ++
Sbjct: 249 LFAMSLFGDRIFYST-----WKKKTIWIANKRKDMVRIN 282
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNEC-EQPGYC---SQMCTNTKGSYICSCNEGY 99
A C C G + D C D+NEC C S C NT+G Y+C C+EGY
Sbjct: 852 ATCQCLKG--FTGDGKLCSDINECGTSTTVCPPTSSKCINTEGGYVCQCSEGY 902
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 29 DLAECKHKFGLC---SNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQ-- 82
D+ EC +C S+ C T G +C C G D + C D++EC+ + C +
Sbjct: 869 DINECGTSTTVCPPTSSKCINTEGGYVCQCSEG--YRGDGIHCLDIDECQLGIHTCGENA 926
Query: 83 MCTNTKGSYICSC 95
CTNT+G+Y C C
Sbjct: 927 TCTNTEGNYTCMC 939
>sp|P01132|EGF_MOUSE Pro-epidermal growth factor OS=Mus musculus GN=Egf PE=1 SV=2
Length = 1217
Score = 128 bits (322), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 148/325 (45%), Gaps = 60/325 (18%)
Query: 18 CPNG---ADEGPGC-DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73
CP G +G C +L C CS+ C T G C CP G +L D TC
Sbjct: 388 CPTGFVLLPDGKQCHELVSCPGNVSKCSHGCVLTSDGPRCICPAGSVLGRDGKTC---TG 444
Query: 74 CEQP--GYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISN---RH--- 124
C P G CSQ+C + GS+ C C GY L+ D +C A L ++ RH
Sbjct: 445 CSSPDNGGCSQICLPLRPGSWECDCFPGYDLQSDRKSCAASGPQPLLLFANSQDIRHMHF 504
Query: 125 -----SILVAD--------------------------LEEKGKD-HRAQDIVVSGLDLVE 152
+L++ +E D + + ++ G+D +E
Sbjct: 505 DGTDYKVLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANMDGSQRERLITEGVDTLE 564
Query: 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTD 212
GLA DWIG IYW DS + + D +G + ++ ++ I++PRG+ + P R LFWTD
Sbjct: 565 GLALDWIGRRIYWTDSGKSVVGGSDLSGKHHRIIIQERISRPRGIAVHPR--ARRLFWTD 622
Query: 213 WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE---- 268
G +PRIE + GS+R I S+ + P+G+T+D T +Y+ D+K I+ +L+
Sbjct: 623 VGMSPRIESASLQGSDRVLIASSNLLEPSGITIDYLTDTLYWCDTKRSVIEMANLDGSKR 682
Query: 269 ---IKTNVNYS---TIFRKLYWIDE 287
I+ +V + +F W+ +
Sbjct: 683 RRLIQNDVGHPFSLAVFEDHLWVSD 707
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 26/217 (11%)
Query: 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST- 277
I + DG++ ++S ++ L D ++YFA + L +I+ +++ T
Sbjct: 499 IRHMHFDGTDYKVLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANMDGSQRERLITE 558
Query: 278 ------------IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENG 325
I R++YW D G + +G +++ G + I++ ++ + +
Sbjct: 559 GVDTLEGLALDWIGRRIYWTDSGKS----VVGGSDLSGKHHRIIIQERISRPRGIAVHPR 614
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
R LFWTD G +PRIE + GS+R I S+ + P+G+T+D T +Y+
Sbjct: 615 ---------ARRLFWTDVGMSPRIESASLQGSDRVLIASSNLLEPSGITIDYLTDTLYWC 665
Query: 386 DSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
D+K I+ N DG+ R+++I D+ F+ + D+
Sbjct: 666 DTKRSVIEMANLDGSKRRRLIQNDVGHPFSLAVFEDH 702
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 36 KFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-CSQMCTNTKGSYICS 94
+FGLC P C G LS D C+D+NEC + C+ C NT GSY C+
Sbjct: 332 RFGLCERD----PKSHSSACAEGYTLSRDRKYCEDVNECATQNHGCTLGCENTPGSYHCT 387
Query: 95 CNEGYVLEYDNHTCKAI 111
C G+VL D C +
Sbjct: 388 CPTGFVLLPDGKQCHEL 404
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 71/183 (38%), Gaps = 36/183 (19%)
Query: 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFW 210
V GLA DWI + W+D + I V D G N VL ++ P + +DP R +FW
Sbjct: 125 VSGLAIDWIDDEVLWVDQQNGVITVTDMTGKNSRVLLS-SLKHPSNIAVDPI--ERLMFW 181
Query: 211 TDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270
+ + R + G + T++ T + LTLD+ +R
Sbjct: 182 SSEVTG-SLHRAHLKGVDVKTLLETGGI--SVLTLDVLDKR------------------- 219
Query: 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYS 330
L+W+ + G G I + +G + ++ + ++ ++YS
Sbjct: 220 -----------LFWVQDSGEGSHAYIHSCDYEGGSVRLIRHQARHSLSSMAFFGDRIFYS 268
Query: 331 TLK 333
LK
Sbjct: 269 VLK 271
Score = 36.2 bits (82), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 11 VCDGKT---DCPNG-ADEGPGC-DLAECKHKFGLCSNT---CHPTPLGALCTCPPGEILS 62
V DG+T C G A +G C D+ EC C +T C T G +C C G
Sbjct: 854 VSDGETAECQCLKGFARDGNLCSDIDECVLARSDCPSTSSRCINTEGGYVCRCSEG--YE 911
Query: 63 NDSVTCQDMNECEQPGY-CSQ--MCTNTKGSYICSC 95
D ++C D++EC++ + C + CTNT+G Y C+C
Sbjct: 912 GDGISCFDIDECQRGAHNCGENAACTNTEGGYNCTC 947
Score = 35.4 bits (80), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Query: 51 ALCTCPPGEILSNDSVTCQDMNEC-----EQPGYCSQMCTNTKGSYICSCNEGYVLEYDN 105
A C C G + D C D++EC + P S+ C NT+G Y+C C+EGY E D
Sbjct: 860 AECQCLKG--FARDGNLCSDIDECVLARSDCPSTSSR-CINTEGGYVCRCSEGY--EGDG 914
Query: 106 HTCKAIN 112
+C I+
Sbjct: 915 ISCFDID 921
>sp|P10493|NID1_MOUSE Nidogen-1 OS=Mus musculus GN=Nid1 PE=1 SV=2
Length = 1245
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 85/161 (52%), Gaps = 13/161 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ L EG+A D +G I+W DS+L+RIEV +GT R VL + PRG++ DP
Sbjct: 1013 IIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPV 1072
Query: 203 PGTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G L+WTDW +NP+IE MDG+NR + + PNGLT D + ++ + D+
Sbjct: 1073 RGN--LYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHR 1130
Query: 262 IDC---------KSLE-IKTNVNYSTIFRKLYWIDEGGNGV 292
+C K LE ++ ++ + LY+ D N V
Sbjct: 1131 AECLNPAQPGRRKVLEGLQYPFAVTSYGKNLYYTDWKTNSV 1171
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 154/407 (37%), Gaps = 68/407 (16%)
Query: 53 CTCPPGEILSNDSVTCQDMNECEQPG-YCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI 111
C+C PG S D C+D++EC+ + C NT GS+ C C GY + D C
Sbjct: 785 CSCLPG--FSGDGRACRDVDECQHSRCHPDAFCYNTPGSFTCQCKPGY--QGDGFRCMPG 840
Query: 112 NHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWI--------GGHI 163
S + H + A G D AQ + G+ + + Y G+
Sbjct: 841 EVSKTRCQLEREHILGAA----GGAD--AQRPTLQGMFVPQCDEYGHYVPTQCHHSTGYC 894
Query: 164 YWLDSRLNRIEVCDENGTNR---IVLAKDNITQ----PRGMMLDPSPGTRWLFWTDWGEN 216
+ +D +E R + I Q P ++ P PGT LF +
Sbjct: 895 WCVDRDGRELEGSRTPPGMRPPCLSTVAPPIHQGPVVPTAVIPLP-PGTHLLF----AQT 949
Query: 217 PRIERIGMD-GSNRSTIISTKIYWPN----GLTLDIATRRVYFADSKLDFIDCKSLE--- 268
+IER+ ++ + + T ++ P GL D + VY+ D I SL
Sbjct: 950 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGE 1009
Query: 269 ----------IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--E 316
+ + R ++W D + +I A MDG+ +L L
Sbjct: 1010 PTTIIRQDLGSPEGIALDHLGRTIFWTDSQLD----RIEVAKMDGTQRRVLFDTGLVNPR 1065
Query: 317 ALALDLENGMLYYSTLKCTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTKIYWPNGLTL 375
+ D G LY WTDW +NP+IE MDG+NR + + PNGLT
Sbjct: 1066 GIVTDPVRGNLY-----------WTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTF 1114
Query: 376 DIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
D + ++ + D+ + N GR++V L L F G N
Sbjct: 1115 DAFSSQLCWVDAGTHRAECLNPAQPGRRKV-LEGLQYPFAVTSYGKN 1160
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 23/148 (15%)
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
+PL+ + A + + ++ LA D + ++Y WTD E P I R
Sbjct: 955 LPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVY-----------WTDISE-PSIGR 1002
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
+ G +TII + P G+ LD R +++ DS+LD I+ DGT R+
Sbjct: 1003 ASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR-------- 1054
Query: 412 VEFTNDLMGDNGVPALALDLENGMLYYS 439
V F L+ G+ D G LY++
Sbjct: 1055 VLFDTGLVNPRGI---VTDPVRGNLYWT 1079
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 43 TCHPTPLGALCTCPPGEILSNDSVTCQDMNEC-EQPGYCSQ--MCTNTKGSYICSCNEGY 99
C P P G TC D TC D++EC EQP C +C N G++ C C EGY
Sbjct: 682 ACRPGP-GTQFTCECSIGFRGDGQTCYDIDECSEQPSRCGNHAVCNNLPGTFRCECVEGY 740
Query: 100 VLEYDNHTCKA 110
D TC A
Sbjct: 741 HFS-DRGTCVA 750
>sp|P14543|NID1_HUMAN Nidogen-1 OS=Homo sapiens GN=NID1 PE=1 SV=3
Length = 1247
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 89/161 (55%), Gaps = 13/161 (8%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
I+ L EG+A D +G +I+W DS L+RIEV +GT R VL + ++ PRG++ D
Sbjct: 1015 IIRQDLGSPEGIAVDHLGRNIFWTDSNLDRIEVAKLDGTQRRVLFETDLVNPRGIVTDSV 1074
Query: 203 PGTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 261
G L+WTDW +NP+IE MDG+NR ++ + PNGLT D + ++ + D+ +
Sbjct: 1075 RGN--LYWTDWNRDNPKIETSYMDGTNRRILVQDDLGLPNGLTFDAFSSQLCWVDAGTNR 1132
Query: 262 IDC---------KSLE-IKTNVNYSTIFRKLYWIDEGGNGV 292
+C K+LE ++ ++ + LY+ D N V
Sbjct: 1133 AECLNPSQPSRRKALEGLQYPFAVTSYGKNLYFTDWKMNSV 1173
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 152/408 (37%), Gaps = 70/408 (17%)
Query: 53 CTCPPGEILSNDSVTCQDMNECEQPGYCS--QMCTNTKGSYICSCNEGYVLEYDNHTCKA 110
C+C PG S D CQD++EC QP C C NT GS+ C C GY + D C
Sbjct: 787 CSCLPG--FSGDGQACQDVDEC-QPSRCHPDAFCYNTPGSFTCQCKPGY--QGDGFRCVP 841
Query: 111 INHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIG--------GH 162
H + A + Q + GL + E A+ G+
Sbjct: 842 GEVEKTRCQHEREHILGAAGATDP------QRPIPPGLFVPECDAHGHYAPTQCHGSTGY 895
Query: 163 IYWLDSRLNRIE-VCDENGTNRIVLA------KDNITQPRGMMLDPSPGTRWLFWTDWGE 215
+ +D +E G L+ P ++ P PGT LF +
Sbjct: 896 CWCVDRDGREVEGTRTRPGMTPPCLSTVAPPIHQGPAVPTAVIPLP-PGTHLLF----AQ 950
Query: 216 NPRIERIGMDGSN-RSTIISTKIYWPN----GLTLDIATRRVYFADSKLDFIDCKSLE-- 268
+IER+ ++G+ R T ++ P GL D + VY+ D I SL
Sbjct: 951 TGKIERLPLEGNTMRKTEAKAFLHVPAKVIIGLAFDCVDKMVYWTDITEPSIGRASLHGG 1010
Query: 269 -----------IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY-- 315
+ + R ++W D + +I A +DG+ +L L
Sbjct: 1011 EPTTIIRQDLGSPEGIAVDHLGRNIFWTDSNLD----RIEVAKLDGTQRRVLFETDLVNP 1066
Query: 316 EALALDLENGMLYYSTLKCTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTKIYWPNGLT 374
+ D G LY WTDW +NP+IE MDG+NR ++ + PNGLT
Sbjct: 1067 RGIVTDSVRGNLY-----------WTDWNRDNPKIETSYMDGTNRRILVQDDLGLPNGLT 1115
Query: 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422
D + ++ + D+ + + N R++ L L F G N
Sbjct: 1116 FDAFSSQLCWVDAGTNRAECLNPSQPSRRKA-LEGLQYPFAVTSYGKN 1162
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 23/148 (15%)
Query: 292 VPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351
+PL+ + A + V ++ LA D + M+Y WTD E P I R
Sbjct: 957 LPLEGNTMRKTEAKAFLHVPAKVIIGLAFDCVDKMVY-----------WTDITE-PSIGR 1004
Query: 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
+ G +TII + P G+ +D R +++ DS LD I+ DGT R+
Sbjct: 1005 ASLHGGEPTTIIRQDLGSPEGIAVDHLGRNIFWTDSNLDRIEVAKLDGTQRR-------- 1056
Query: 412 VEFTNDLMGDNGVPALALDLENGMLYYS 439
V F DL+ G+ D G LY++
Sbjct: 1057 VLFETDLVNPRGI---VTDSVRGNLYWT 1081
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 44 CHPTPLGAL-CTCPPGEILSNDSVTCQDMNEC-EQPGYCSQ--MCTNTKGSYICSCNEGY 99
C P P C C G D TC D++EC EQP C +C N G++ C C EGY
Sbjct: 685 CRPGPRTQFTCECSIG--FRGDGRTCYDIDECSEQPSVCGSHTICNNHPGTFRCECVEGY 742
Query: 100 VLEYDNHTCKAI 111
D TC A+
Sbjct: 743 QFS-DEGTCVAV 753
>sp|O88322|NID2_MOUSE Nidogen-2 OS=Mus musculus GN=Nid2 PE=1 SV=2
Length = 1403
Score = 91.7 bits (226), Expect = 1e-17, Method: Composition-based stats.
Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 3/125 (2%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ I+ SGL EGLA D +YW DS L++IE + +G+ R VL ++ PR + +D
Sbjct: 1206 ETIITSGLISPEGLAIDHFRRTMYWTDSGLDKIERAELDGSERKVLFHTDLVNPRAITVD 1265
Query: 201 PSPGTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G L+WTDW E P+IE +DG NR +I+ I PNGLT D ++ + +AD+
Sbjct: 1266 PIRGN--LYWTDWNREAPKIETSSLDGENRRILINKDIGLPNGLTFDPFSKLLCWADAGT 1323
Query: 260 DFIDC 264
++C
Sbjct: 1324 KKLEC 1328
Score = 74.7 bits (182), Expect = 2e-12, Method: Composition-based stats.
Identities = 60/204 (29%), Positives = 89/204 (43%), Gaps = 50/204 (24%)
Query: 206 RWLFWTDWGENPRIERIGMD-GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
R ++WTD I R ++ G+ TII++ + P GL +D R +Y+ DS LD
Sbjct: 1182 RMVYWTDVAGRT-ISRASLEAGAEPETIITSGLISPEGLAIDHFRRTMYWTDSGLD---- 1236
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDL 322
KI +A +DGS +L L A+ +D
Sbjct: 1237 ------------------------------KIERAELDGSERKVLFHTDLVNPRAITVDP 1266
Query: 323 ENGMLYYSTLKCTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 381
G LY WTDW E P+IE +DG NR +I+ I PNGLT D ++
Sbjct: 1267 IRGNLY-----------WTDWNREAPKIETSSLDGENRRILINKDIGLPNGLTFDPFSKL 1315
Query: 382 VYFADSKLDFIDFCNYDGTGRQQV 405
+ +AD+ ++ DGTGR+ +
Sbjct: 1316 LCWADAGTKKLECTLPDGTGRRVI 1339
Score = 53.1 bits (126), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 40 CSNT--CHP-TPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-C--SQMCTNTKGSYIC 93
C T CHP T + C C PG D +C D+NEC + C + +C N GSY C
Sbjct: 793 CDTTARCHPGTGVDYTCECTPG--FQGDGRSCVDVNECATGFHRCGPNSVCVNLVGSYRC 850
Query: 94 SCNEGYVLEYDNHTC 108
C GY D HTC
Sbjct: 851 ECRSGYEFADDQHTC 865
Score = 43.5 bits (101), Expect = 0.004, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 336 RWLFWTDWGENPRIERIGMD-GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDF 394
R ++WTD I R ++ G+ TII++ + P GL +D R +Y+ DS LD I+
Sbjct: 1182 RMVYWTDVAGRT-ISRASLEAGAEPETIITSGLISPEGLAIDHFRRTMYWTDSGLDKIER 1240
Query: 395 CNYDGTGRQQVILIDLM 411
DG+ R+ + DL+
Sbjct: 1241 AELDGSERKVLFHTDLV 1257
Score = 38.9 bits (89), Expect = 0.076, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 53 CTCPPGEILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGY 99
C C PG I + C D++EC E + + +C NT GS+ C C GY
Sbjct: 900 CACLPGFIGTGHQ--CSDVDECAENRCHEAAICYNTPGSFSCRCQPGY 945
>sp|B5DFC9|NID2_RAT Nidogen-2 OS=Rattus norvegicus GN=Nid2 PE=2 SV=1
Length = 1396
Score = 90.9 bits (224), Expect = 2e-17, Method: Composition-based stats.
Identities = 49/125 (39%), Positives = 72/125 (57%), Gaps = 3/125 (2%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ I+ SGL EGLA D +YW DS L++IE +G+ R VL ++ PR + +D
Sbjct: 1199 ETIITSGLISPEGLAIDHFRRTMYWTDSGLDKIERAGLDGSERKVLFHTDLVNPRAITVD 1258
Query: 201 PSPGTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G L+WTDW E P+IE +DG NR +I+ I PNGLT D ++ + +AD+
Sbjct: 1259 PIRGN--LYWTDWNREAPKIETSSLDGENRRILINKDIGLPNGLTFDPFSKLLCWADAGT 1316
Query: 260 DFIDC 264
++C
Sbjct: 1317 KKLEC 1321
Score = 74.7 bits (182), Expect = 1e-12, Method: Composition-based stats.
Identities = 60/204 (29%), Positives = 89/204 (43%), Gaps = 50/204 (24%)
Query: 206 RWLFWTDWGENPRIERIGMD-GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
R ++WTD I R ++ G+ TII++ + P GL +D R +Y+ DS LD
Sbjct: 1175 RMVYWTDVAGRT-ISRASLEAGAEPETIITSGLISPEGLAIDHFRRTMYWTDSGLD---- 1229
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDL 322
KI +A +DGS +L L A+ +D
Sbjct: 1230 ------------------------------KIERAGLDGSERKVLFHTDLVNPRAITVDP 1259
Query: 323 ENGMLYYSTLKCTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 381
G LY WTDW E P+IE +DG NR +I+ I PNGLT D ++
Sbjct: 1260 IRGNLY-----------WTDWNREAPKIETSSLDGENRRILINKDIGLPNGLTFDPFSKL 1308
Query: 382 VYFADSKLDFIDFCNYDGTGRQQV 405
+ +AD+ ++ DGTGR+ +
Sbjct: 1309 LCWADAGTKKLECTLPDGTGRRVI 1332
Score = 53.1 bits (126), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 40 CSNT--CHP-TPLGALCTCPPGEILSNDSVTCQDMNECEQPGY-C--SQMCTNTKGSYIC 93
C T CHP T + C C PG D +C D+NEC + C + +C N GSY C
Sbjct: 786 CDTTARCHPGTGVDYTCECTPG--FQGDGRSCVDVNECATGFHRCGPNSVCVNLVGSYRC 843
Query: 94 SCNEGYVLEYDNHTCKAI 111
C GY D HTC I
Sbjct: 844 ECRSGYEFADDRHTCVLI 861
Score = 43.5 bits (101), Expect = 0.004, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 336 RWLFWTDWGENPRIERIGMD-GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDF 394
R ++WTD I R ++ G+ TII++ + P GL +D R +Y+ DS LD I+
Sbjct: 1175 RMVYWTDVAGRT-ISRASLEAGAEPETIITSGLISPEGLAIDHFRRTMYWTDSGLDKIER 1233
Query: 395 CNYDGTGRQQVILIDLM 411
DG+ R+ + DL+
Sbjct: 1234 AGLDGSERKVLFHTDLV 1250
Score = 38.9 bits (89), Expect = 0.076, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 53 CTCPPGEILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGY 99
C C PG + + C D++EC E + + +C NT GS+ C C GY
Sbjct: 893 CACLPGFVGTGHQ--CSDVDECAENRCHGAAICYNTPGSFSCRCQPGY 938
>sp|Q14112|NID2_HUMAN Nidogen-2 OS=Homo sapiens GN=NID2 PE=1 SV=3
Length = 1375
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 74/125 (59%), Gaps = 3/125 (2%)
Query: 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
+ IV SGL EGLA D I +YW DS L++IE +G+ R VL ++ PR + +D
Sbjct: 1178 ETIVNSGLISPEGLAIDHIRRTMYWTDSVLDKIESALLDGSERKVLFYTDLVNPRAIAVD 1237
Query: 201 PSPGTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G L+WTDW E P+IE +DG NR +I+T I PNGLT D ++ + +AD+
Sbjct: 1238 PIRGN--LYWTDWNREAPKIETSSLDGENRRILINTDIGLPNGLTFDPFSKLLCWADAGT 1295
Query: 260 DFIDC 264
++C
Sbjct: 1296 KKLEC 1300
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 96/214 (44%), Gaps = 51/214 (23%)
Query: 206 RWLFWTDWGENPRIERIGMD-GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264
R ++WTD I R G++ G+ TI+++ + P GL +D R +Y+ DS LD
Sbjct: 1154 RMVYWTDVAGR-TISRAGLELGAEPETIVNSGLISPEGLAIDHIRRTMYWTDSVLD---- 1208
Query: 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLY--EALALDL 322
KI A +DGS +L L A+A+D
Sbjct: 1209 ------------------------------KIESALLDGSERKVLFYTDLVNPRAIAVDP 1238
Query: 323 ENGMLYYSTLKCTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRR 381
G LY WTDW E P+IE +DG NR +I+T I PNGLT D ++
Sbjct: 1239 IRGNLY-----------WTDWNREAPKIETSSLDGENRRILINTDIGLPNGLTFDPFSKL 1287
Query: 382 VYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFT 415
+ +AD+ ++ DGTGR +VI +L F+
Sbjct: 1288 LCWADAGTKKLECTLPDGTGR-RVIQNNLKYPFS 1320
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 13/105 (12%)
Query: 336 RWLFWTDWGENPRIERIGMD-GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDF 394
R ++WTD I R G++ G+ TI+++ + P GL +D R +Y+ DS LD I+
Sbjct: 1154 RMVYWTDVAGR-TISRAGLELGAEPETIVNSGLISPEGLAIDHIRRTMYWTDSVLDKIES 1212
Query: 395 CNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYS 439
DG+ R+ + DL+ A+A+D G LY++
Sbjct: 1213 ALLDGSERKVLFYTDLVNPR-----------AIAVDPIRGNLYWT 1246
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 42/101 (41%), Gaps = 13/101 (12%)
Query: 22 ADEGPGCDLAECKHKFGLCSNT--CHP-TPLGALCTCPPGEILSNDSVTCQDMNECEQPG 78
+D PG + H +C T CHP T + C C G D C D NEC G
Sbjct: 755 SDPTPGNPCYDGSH---MCDTTARCHPGTGVDYTCECASG--YQGDGRNCVDENECAT-G 808
Query: 79 Y----CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA 115
+ + +C N GSY C C GY D HTC I A
Sbjct: 809 FHRCGPNSVCINLPGSYRCECRSGYEFADDRHTCILITPPA 849
Score = 35.8 bits (81), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 53 CTCPPGEILSNDSVTCQDMNEC-EQPGYCSQMCTNTKGSYICSCNEGY 99
C C PG + D C D++EC E + + C NT GS+ C C GY
Sbjct: 877 CACLPG--YAGDGHQCTDVDECSENRCHPAATCYNTPGSFSCRCQPGY 922
>sp|O88307|SORL_MOUSE Sortilin-related receptor OS=Mus musculus GN=Sorl1 PE=2 SV=3
Length = 2215
Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 77/123 (62%), Gaps = 6/123 (4%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT-QPRGMMLDP 201
I+ SGL+ VE LA++ + +YW+D+ +IEV + +G R+ + ++ +PR ++L P
Sbjct: 826 IINSGLETVEALAFEPLSQLLYWVDAGFKKIEVANPDGDFRLTIVNSSVLDRPRALVLVP 885
Query: 202 SPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
G +FWTDWG+ P I R MDGS ++S + WPNG+++D ++ +Y+ D+ LD
Sbjct: 886 QEGV--MFWTDWGDLKPGIYRSYMDGSAAYRLVSEDVKWPNGISVD--SQWIYWTDAYLD 941
Query: 261 FID 263
I+
Sbjct: 942 CIE 944
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 89/179 (49%), Gaps = 24/179 (13%)
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI 296
+YW + L LD R + + I LE + + + + LYW+D G KI
Sbjct: 802 LYWSD-LALDTIQRLCLNGSTGQEVIINSGLETVEALAFEPLSQLLYWVDAGFK----KI 856
Query: 297 GKANMDGSNASILVSGQLYE---ALALDLENGMLYYSTLKCTRWLFWTDWGE-NPRIERI 352
AN DG +V+ + + AL L + G++ FWTDWG+ P I R
Sbjct: 857 EVANPDGDFRLTIVNSSVLDRPRALVLVPQEGVM-----------FWTDWGDLKPGIYRS 905
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
MDGS ++S + WPNG+++D ++ +Y+ D+ LD I+ + +G+Q+ +++D +
Sbjct: 906 YMDGSAAYRLVSEDVKWPNGISVD--SQWIYWTDAYLDCIERITF--SGQQRSVILDSL 960
>sp|A4QPB2|LRP5L_HUMAN Low-density lipoprotein receptor-related protein 5-like protein
OS=Homo sapiens GN=LRP5L PE=2 SV=2
Length = 252
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
Query: 140 AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMML 199
AQ ++ + ++ + +A +W+ +YW + IEV N T+ +L +++ +PR + L
Sbjct: 25 AQTLINTKINDPDDIAVNWVARSLYWTHTGTEHIEVTCLNSTSHKILVSEDMDEPRAIAL 84
Query: 200 DPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL 259
P G +W DWGENP I+R +D +++ + WPNGL LD+ ++Y+ D+K
Sbjct: 85 HPEMGL--TYWIDWGENPEIKRANLDRQELRVLVNASLGWPNGLALDLQEGKLYWGDAKT 142
Query: 260 DFIDCKSLE 268
D I+ S++
Sbjct: 143 DKIEAISVD 151
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 100/216 (46%), Gaps = 48/216 (22%)
Query: 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267
++WTD E I R +DGS T+I+TKI P+ DIA
Sbjct: 5 VYWTD-DEVWAIRRAYLDGSGAQTLINTKINDPD----DIA------------------- 40
Query: 268 EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYE--ALALDLENG 325
VN+ + R LYW G + + ++ ++ ILVS + E A+AL E G
Sbjct: 41 -----VNW--VARSLYWTHTGTEHIEVTC----LNSTSHKILVSEDMDEPRAIALHPEMG 89
Query: 326 MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385
+ Y W DWGENP I+R +D +++ + WPNGL LD+ ++Y+
Sbjct: 90 LTY-----------WIDWGENPEIKRANLDRQELRVLVNASLGWPNGLALDLQEGKLYWG 138
Query: 386 DSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421
D+K D I+ + D T RQ ++ L F L+GD
Sbjct: 139 DAKTDKIEAISVDETKRQTLLKDKLPHIFRFTLLGD 174
Score = 38.5 bits (88), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS 202
+V + L GLA D G +YW D++ ++IE + T R L KD + L
Sbjct: 115 LVNASLGWPNGLALDLQEGKLYWGDAKTDKIEAISVDETKRQTLLKDKLPHIFRFTLLGD 174
Query: 203 PGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
+++WT W ++ I+R+ +NR II
Sbjct: 175 ----FIYWTAW-QHHSIKRVHKVKANRDVII 200
>sp|Q92673|SORL_HUMAN Sortilin-related receptor OS=Homo sapiens GN=SORL1 PE=1 SV=2
Length = 2214
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 76/123 (61%), Gaps = 6/123 (4%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT-QPRGMMLDP 201
I+ SGL+ VE LA++ + +YW+D+ +IEV + +G R+ + ++ +PR ++L P
Sbjct: 826 IINSGLETVEALAFEPLSQLLYWVDAGFKKIEVANPDGDFRLTIVNSSVLDRPRALVLVP 885
Query: 202 SPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
G +FWTDWG+ P I R MDGS ++S + WPNG+++D + +Y+ D+ L+
Sbjct: 886 QEGV--MFWTDWGDLKPGIYRSNMDGSAAYHLVSEDVKWPNGISVD--DQWIYWTDAYLE 941
Query: 261 FID 263
I+
Sbjct: 942 CIE 944
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 28/195 (14%)
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI 296
+YW + L LD+ R + + I LE + + + + LYW+D G KI
Sbjct: 802 LYWSD-LALDVIQRLCLNGSTGQEVIINSGLETVEALAFEPLSQLLYWVDAGFK----KI 856
Query: 297 GKANMDGSNASILVSGQLYE---ALALDLENGMLYYSTLKCTRWLFWTDWGE-NPRIERI 352
AN DG +V+ + + AL L + G++ FWTDWG+ P I R
Sbjct: 857 EVANPDGDFRLTIVNSSVLDRPRALVLVPQEGVM-----------FWTDWGDLKPGIYRS 905
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDL-- 410
MDGS ++S + WPNG+++D + +Y+ D+ L+ I+ + G R VIL +L
Sbjct: 906 NMDGSAAYHLVSEDVKWPNGISVD--DQWIYWTDAYLECIERITFSGQQR-SVILDNLPH 962
Query: 411 ---MVEFTNDLMGDN 422
+ F N++ D+
Sbjct: 963 PYAIAVFKNEIYWDD 977
>sp|Q95209|SORL_RABIT Sortilin-related receptor OS=Oryctolagus cuniculus GN=SORL1 PE=2
SV=1
Length = 2213
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 75/123 (60%), Gaps = 6/123 (4%)
Query: 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNIT-QPRGMMLDP 201
I+ S L+ VE LA++ + +YW+D+ +IEV + +G R+ + ++ +PR ++L P
Sbjct: 825 IINSDLETVEALAFEPLSQLLYWVDAGFKKIEVANPDGDFRLTVVNSSVLDRPRALVLVP 884
Query: 202 SPGTRWLFWTDWGE-NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260
G +FWTDWG+ P I R MDGS ++S + WPNG+++D + +Y+ D+ LD
Sbjct: 885 QEGI--MFWTDWGDLKPGIYRSNMDGSAAYRLVSEDVKWPNGISVD--DQWIYWTDAYLD 940
Query: 261 FID 263
I+
Sbjct: 941 CIE 943
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 89/179 (49%), Gaps = 24/179 (13%)
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI 296
+YW + L LD+ R + + I LE + + + + LYW+D G KI
Sbjct: 801 LYWSD-LALDVIQRLCLNGSTGQEVIINSDLETVEALAFEPLSQLLYWVDAGFK----KI 855
Query: 297 GKANMDGSNASILVSGQLYE---ALALDLENGMLYYSTLKCTRWLFWTDWGE-NPRIERI 352
AN DG +V+ + + AL L + G++ FWTDWG+ P I R
Sbjct: 856 EVANPDGDFRLTVVNSSVLDRPRALVLVPQEGIM-----------FWTDWGDLKPGIYRS 904
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM 411
MDGS ++S + WPNG+++D + +Y+ D+ LD I+ + +G+Q+ +++D +
Sbjct: 905 NMDGSAAYRLVSEDVKWPNGISVD--DQWIYWTDAYLDCIERITF--SGQQRSVILDRL 959
>sp|Q98930|SORL_CHICK Sortilin-related receptor (Fragment) OS=Gallus gallus GN=SORL1 PE=2
SV=1
Length = 1592
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 80/127 (62%), Gaps = 7/127 (5%)
Query: 140 AQDIVVS-GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI-VLAKDNITQPRGM 197
Q+I++S GL+ VE LA++ + +YW+++ + +IEV + +G R+ VL + +PR +
Sbjct: 729 GQEIIISTGLETVEALAFEPLSQLLYWVNAGIPKIEVANPDGDLRLTVLNSSVLERPRAL 788
Query: 198 MLDPSPGTRWLFWTDWGEN-PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256
L P G +FWTDWG++ P I R MDGS + I+S + WPNG+++D +Y+ +
Sbjct: 789 ALVPREGL--MFWTDWGDSRPGIYRSDMDGSLAACIVSEGVRWPNGISVD--DHWIYWTE 844
Query: 257 SKLDFID 263
+ +D I+
Sbjct: 845 AYMDRIE 851
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 89/174 (51%), Gaps = 22/174 (12%)
Query: 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI 296
+YW + +TLDI R S + I LE + + + + LYW++ G +P KI
Sbjct: 709 LYWAD-VTLDIIQRLCLNGSSGQEIIISTGLETVEALAFEPLSQLLYWVNAG---IP-KI 763
Query: 297 GKANMDGSNASILVSGQLYE---ALALDLENGMLYYSTLKCTRWLFWTDWGEN-PRIERI 352
AN DG +++ + E ALAL G++ FWTDWG++ P I R
Sbjct: 764 EVANPDGDLRLTVLNSSVLERPRALALVPREGLM-----------FWTDWGDSRPGIYRS 812
Query: 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406
MDGS + I+S + WPNG+++D +Y+ ++ +D I+ +++G R ++
Sbjct: 813 DMDGSLAACIVSEGVRWPNGISVD--DHWIYWTEAYMDRIERVDFNGLQRSVIL 864
Score = 35.8 bits (81), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 143 IVVSGLDLVEGLAYD--WIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLD 200
IV G+ G++ D WI YW ++ ++RIE D NG R V+ D++ P + +
Sbjct: 822 IVSEGVRWPNGISVDDHWI----YWTEAYMDRIERVDFNGLQRSVIL-DSLPHPYAIAVF 876
Query: 201 PSPGTRWLFWTDWGENPRIERIGMDGSNRSTII 233
+ ++W DW + GS T++
Sbjct: 877 KNE----IYWNDWSQLSIFRASKNSGSRMETLV 905
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.448
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 186,990,227
Number of Sequences: 539616
Number of extensions: 8345687
Number of successful extensions: 21525
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 292
Number of HSP's that attempted gapping in prelim test: 16160
Number of HSP's gapped (non-prelim): 3417
length of query: 461
length of database: 191,569,459
effective HSP length: 121
effective length of query: 340
effective length of database: 126,275,923
effective search space: 42933813820
effective search space used: 42933813820
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)