Query psy17325
Match_columns 461
No_of_seqs 376 out of 3080
Neff 9.3
Searched_HMMs 29240
Date Fri Aug 16 19:14:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17325.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17325hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3m0c_C LDL receptor, low-densi 100.0 3.3E-54 1.1E-58 461.8 44.0 350 2-409 283-641 (791)
2 3v65_B Low-density lipoprotein 100.0 3.7E-52 1.3E-56 415.2 35.9 324 29-409 2-327 (386)
3 3p5b_L Low density lipoprotein 100.0 2.3E-51 8E-56 411.0 40.1 333 31-433 1-341 (400)
4 1n7d_A LDL receptor, low-densi 100.0 1E-50 3.4E-55 432.9 26.4 348 2-407 265-621 (699)
5 3s94_A LRP-6, low-density lipo 100.0 1.3E-46 4.5E-51 395.4 38.0 287 141-446 76-544 (619)
6 4a0p_A LRP6, LRP-6, low-densit 100.0 2.2E-46 7.5E-51 394.0 39.1 286 141-446 72-542 (628)
7 3m0c_C LDL receptor, low-densi 100.0 6.8E-47 2.3E-51 405.2 35.1 375 2-447 203-626 (791)
8 3v64_C Agrin; beta propeller, 100.0 2.4E-44 8.3E-49 353.9 35.4 282 71-409 1-284 (349)
9 1n7d_A LDL receptor, low-densi 100.0 6.6E-44 2.3E-48 380.4 25.3 372 2-447 185-608 (699)
10 3p5b_L Low density lipoprotein 100.0 5.5E-41 1.9E-45 335.8 34.6 303 72-447 1-314 (400)
11 3v65_B Low-density lipoprotein 100.0 1.9E-40 6.4E-45 330.6 30.7 304 70-447 2-312 (386)
12 3s94_A LRP-6, low-density lipo 100.0 9.6E-40 3.3E-44 343.2 36.1 284 70-409 271-559 (619)
13 4a0p_A LRP6, LRP-6, low-densit 100.0 5.5E-40 1.9E-44 345.4 34.0 286 70-410 264-559 (628)
14 3v64_C Agrin; beta propeller, 100.0 1.7E-36 5.9E-41 297.9 29.3 291 30-384 1-303 (349)
15 3sov_A LRP-6, low-density lipo 100.0 5.4E-34 1.8E-38 276.2 32.2 242 114-409 3-247 (318)
16 1ijq_A LDL receptor, low-densi 100.0 1.2E-32 4.2E-37 266.8 34.0 237 116-408 2-246 (316)
17 3sov_A LRP-6, low-density lipo 100.0 1E-32 3.5E-37 267.2 26.5 222 162-447 6-232 (318)
18 1ijq_A LDL receptor, low-densi 100.0 1E-31 3.5E-36 260.4 30.9 223 163-447 4-232 (316)
19 1npe_A Nidogen, entactin; glyc 100.0 6.6E-29 2.3E-33 234.5 32.9 241 116-407 2-245 (267)
20 1npe_A Nidogen, entactin; glyc 100.0 1E-27 3.4E-32 226.3 28.4 223 161-446 2-231 (267)
21 3s25_A Hypothetical 7-bladed b 99.9 3.6E-23 1.2E-27 198.1 25.9 245 123-456 36-297 (302)
22 3tc9_A Hypothetical hydrolase; 99.9 5.9E-23 2E-27 207.0 28.8 248 147-448 135-425 (430)
23 4hw6_A Hypothetical protein, I 99.9 1.6E-22 5.3E-27 203.9 29.9 248 147-448 137-428 (433)
24 3hrp_A Uncharacterized protein 99.9 1.1E-21 3.9E-26 196.5 32.1 247 147-448 129-405 (409)
25 3kya_A Putative phosphatase; s 99.9 4.8E-21 1.6E-25 193.2 29.3 252 146-448 136-470 (496)
26 3fvz_A Peptidyl-glycine alpha- 99.9 1.1E-19 3.6E-24 176.7 26.5 240 147-447 22-316 (329)
27 3tc9_A Hypothetical hydrolase; 99.8 2.2E-19 7.4E-24 180.9 25.3 226 116-397 150-428 (430)
28 3s25_A Hypothetical 7-bladed b 99.8 7.1E-20 2.4E-24 175.2 19.5 208 122-402 86-296 (302)
29 1q7f_A NHL, brain tumor CG1071 99.8 2E-18 6.8E-23 163.6 28.3 237 147-448 28-275 (286)
30 1rwi_B Serine/threonine-protei 99.8 6.6E-19 2.2E-23 165.1 23.9 231 150-448 25-259 (270)
31 2fp8_A Strictosidine synthase; 99.8 3.3E-18 1.1E-22 165.5 27.1 256 147-450 17-311 (322)
32 4hw6_A Hypothetical protein, I 99.8 8.4E-19 2.9E-23 176.6 23.2 225 116-397 153-431 (433)
33 3fvz_A Peptidyl-glycine alpha- 99.8 5.8E-18 2E-22 164.4 23.0 208 147-399 89-322 (329)
34 3hrp_A Uncharacterized protein 99.8 2.1E-17 7.1E-22 165.5 27.0 214 124-397 152-408 (409)
35 3kya_A Putative phosphatase; s 99.8 7.6E-17 2.6E-21 162.6 26.9 220 124-398 162-474 (496)
36 3g4e_A Regucalcin; six bladed 99.8 3.5E-16 1.2E-20 149.4 30.4 245 142-444 6-264 (297)
37 2qc5_A Streptogramin B lactona 99.8 2.6E-16 8.8E-21 149.2 29.2 236 147-449 18-257 (300)
38 2p4o_A Hypothetical protein; p 99.8 1.3E-16 4.6E-21 153.1 26.8 225 149-443 32-279 (306)
39 2qc5_A Streptogramin B lactona 99.8 3.5E-16 1.2E-20 148.3 28.0 234 147-448 60-296 (300)
40 2z2n_A Virginiamycin B lyase; 99.7 2.3E-15 8E-20 142.5 29.0 234 148-448 56-291 (299)
41 1rwi_B Serine/threonine-protei 99.7 1.3E-16 4.6E-21 149.3 19.9 197 146-397 64-262 (270)
42 2z2n_A Virginiamycin B lyase; 99.7 3.2E-15 1.1E-19 141.6 28.9 233 147-446 13-248 (299)
43 3dr2_A Exported gluconolactona 99.7 4.9E-15 1.7E-19 142.0 30.2 253 142-442 38-297 (305)
44 3e5z_A Putative gluconolactona 99.7 9.1E-15 3.1E-19 139.2 30.2 251 142-449 21-283 (296)
45 2ism_A Putative oxidoreductase 99.7 6.2E-15 2.1E-19 144.4 26.1 262 142-443 24-335 (352)
46 3a9g_A Putative uncharacterize 99.7 3.2E-14 1.1E-18 139.4 29.5 250 143-442 23-331 (354)
47 1q7f_A NHL, brain tumor CG1071 99.7 3.4E-14 1.2E-18 134.2 25.4 196 148-397 76-278 (286)
48 2dg1_A DRP35, lactonase; beta 99.6 4.8E-13 1.6E-17 129.1 30.9 248 144-443 40-301 (333)
49 2qe8_A Uncharacterized protein 99.6 4.6E-14 1.6E-18 137.7 23.7 257 149-446 17-314 (343)
50 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1E-13 3.5E-18 132.4 25.6 252 143-446 12-292 (314)
51 2fp8_A Strictosidine synthase; 99.6 5.3E-14 1.8E-18 135.8 22.5 207 149-398 80-312 (322)
52 3vgz_A Uncharacterized protein 99.6 5.8E-12 2E-16 121.9 34.7 231 149-442 89-334 (353)
53 2ghs_A AGR_C_1268P; regucalcin 99.6 1.7E-12 6E-17 125.5 29.6 236 143-444 43-294 (326)
54 3dsm_A Uncharacterized protein 99.6 4.2E-13 1.4E-17 130.0 25.0 236 150-446 45-295 (328)
55 2g8s_A Glucose/sorbosone dehyd 99.6 4.8E-13 1.7E-17 130.9 25.2 269 143-446 12-347 (353)
56 3vgz_A Uncharacterized protein 99.6 6.4E-12 2.2E-16 121.6 30.9 235 150-447 42-297 (353)
57 3dsm_A Uncharacterized protein 99.6 1.7E-12 5.7E-17 125.7 26.3 213 146-407 81-308 (328)
58 3u4y_A Uncharacterized protein 99.5 1.2E-11 4E-16 118.9 31.5 250 145-447 37-298 (331)
59 3das_A Putative oxidoreductase 99.5 8E-12 2.7E-16 120.8 29.4 262 142-443 25-328 (347)
60 2qe8_A Uncharacterized protein 99.5 3.4E-13 1.1E-17 131.5 18.9 196 147-394 65-316 (343)
61 3a9g_A Putative uncharacterize 99.5 8.8E-13 3E-17 129.1 21.2 227 185-451 22-295 (354)
62 3g4e_A Regucalcin; six bladed 99.5 4E-12 1.4E-16 121.1 25.1 208 184-446 5-222 (297)
63 3hfq_A Uncharacterized protein 99.5 6.6E-12 2.3E-16 121.8 25.9 241 147-447 38-311 (347)
64 3u4y_A Uncharacterized protein 99.5 1.9E-11 6.7E-16 117.4 28.7 230 156-447 5-246 (331)
65 2w2n_E LDL receptor, low-densi 99.5 1.2E-14 4.1E-19 116.0 4.3 90 18-109 18-107 (107)
66 3qqz_A Putative uncharacterize 99.5 1.4E-11 4.6E-16 114.1 25.3 198 149-397 27-251 (255)
67 2ism_A Putative oxidoreductase 99.5 1.9E-12 6.6E-17 126.6 19.6 213 145-389 71-335 (352)
68 3e5z_A Putative gluconolactona 99.5 1.2E-11 4.2E-16 117.3 23.3 201 189-448 25-242 (296)
69 2p4o_A Hypothetical protein; p 99.4 1.2E-11 4E-16 118.5 22.6 187 149-389 72-279 (306)
70 2p9w_A MAL S 1 allergenic prot 99.4 1.3E-10 4.4E-15 110.3 27.5 199 149-398 13-264 (334)
71 3dr2_A Exported gluconolactona 99.4 1.9E-11 6.3E-16 116.9 21.3 166 189-399 42-224 (305)
72 1cru_A Protein (soluble quinop 99.4 7.5E-11 2.6E-15 119.1 26.7 181 142-333 20-247 (454)
73 1l0q_A Surface layer protein; 99.4 5.9E-10 2E-14 109.5 32.6 235 149-447 32-269 (391)
74 3sre_A PON1, serum paraoxonase 99.4 6.6E-11 2.3E-15 114.8 24.9 196 149-386 50-284 (355)
75 3scy_A Hypothetical bacterial 99.4 1.6E-09 5.4E-14 105.6 33.5 244 147-448 48-332 (361)
76 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 1.1E-10 3.6E-15 111.3 24.2 195 149-398 71-298 (314)
77 3qqz_A Putative uncharacterize 99.4 1.7E-10 5.8E-15 106.7 24.6 205 191-448 26-249 (255)
78 1z6c_A Vitamin K-dependent pro 99.4 2.8E-13 9.6E-18 104.0 4.7 82 29-111 2-86 (87)
79 1ri6_A Putative isomerase YBHE 99.4 5.1E-10 1.8E-14 107.4 28.1 242 149-448 38-303 (343)
80 3das_A Putative oxidoreductase 99.4 1E-10 3.6E-15 113.0 22.7 226 185-452 25-292 (347)
81 1lmj_A Fibrillin 1; EGF, calci 99.4 5.4E-13 1.8E-17 102.2 5.0 80 29-108 2-85 (86)
82 1ri6_A Putative isomerase YBHE 99.3 6.6E-10 2.3E-14 106.6 27.1 237 160-447 4-256 (343)
83 2g8s_A Glucose/sorbosone dehyd 99.3 6.8E-11 2.3E-15 115.6 19.9 215 146-397 63-352 (353)
84 1jof_A Carboxy-CIS,CIS-muconat 99.3 5.4E-10 1.8E-14 109.5 25.0 243 147-447 38-335 (365)
85 2iwa_A Glutamine cyclotransfer 99.3 1.9E-09 6.4E-14 100.2 26.5 192 149-397 21-235 (266)
86 1l0q_A Surface layer protein; 99.3 2.7E-09 9.4E-14 104.7 29.5 185 161-397 2-187 (391)
87 2dg1_A DRP35, lactonase; beta 99.3 1.3E-09 4.3E-14 105.0 25.4 199 148-398 86-315 (333)
88 3sre_A PON1, serum paraoxonase 99.3 9.4E-10 3.2E-14 106.7 23.9 192 192-440 50-284 (355)
89 1emn_A Fibrillin; extracellula 99.2 9.5E-12 3.3E-16 94.2 5.7 76 29-108 4-81 (82)
90 3c75_H MADH, methylamine dehyd 99.2 1.1E-09 3.6E-14 109.1 21.3 255 159-446 83-395 (426)
91 3bws_A Protein LP49; two-domai 99.2 1.5E-08 5.3E-13 100.8 30.0 242 150-448 171-427 (433)
92 3scy_A Hypothetical bacterial 99.2 6.5E-08 2.2E-12 94.0 33.7 200 148-398 99-336 (361)
93 3hfq_A Uncharacterized protein 99.2 1.5E-08 5E-13 98.0 28.3 206 148-403 85-322 (347)
94 2p9w_A MAL S 1 allergenic prot 99.2 9.4E-09 3.2E-13 97.6 24.4 167 192-398 13-214 (334)
95 1x7a_L Coagulation factor IX, 99.2 3.7E-11 1.3E-15 101.5 6.5 81 29-113 47-129 (146)
96 2ghs_A AGR_C_1268P; regucalcin 99.1 1E-08 3.5E-13 98.9 24.3 201 185-446 42-253 (326)
97 3bws_A Protein LP49; two-domai 99.1 2.1E-08 7.1E-13 99.9 26.0 237 150-443 124-366 (433)
98 2iwa_A Glutamine cyclotransfer 99.1 4.4E-08 1.5E-12 91.0 25.6 200 193-446 22-230 (266)
99 3sjl_D Methylamine dehydrogena 99.1 2.6E-08 8.8E-13 97.6 25.0 257 157-446 41-356 (386)
100 1cru_A Protein (soluble quinop 99.1 4.6E-09 1.6E-13 105.9 18.4 177 185-390 20-249 (454)
101 1pby_B Quinohemoprotein amine 99.1 5E-08 1.7E-12 93.1 24.7 241 150-446 35-303 (337)
102 2bou_A EGF-like module contain 99.0 8.9E-11 3.1E-15 99.1 4.1 98 17-114 22-142 (143)
103 2mad_H Methylamine dehydrogena 99.0 3.6E-07 1.2E-11 89.8 29.0 236 144-446 63-343 (373)
104 1dx5_I Thrombomodulin; serine 99.0 4.1E-11 1.4E-15 97.5 0.1 77 30-108 39-118 (118)
105 1nfu_B Coagulation factor XA, 99.0 1.3E-10 4.5E-15 102.2 3.3 80 29-112 41-123 (195)
106 1aut_L Activated protein C; se 99.0 3.7E-10 1.3E-14 91.2 5.4 67 43-113 27-97 (114)
107 1jof_A Carboxy-CIS,CIS-muconat 99.0 2E-07 6.9E-12 91.0 26.0 174 190-403 38-229 (365)
108 3c75_H MADH, methylamine dehyd 99.0 7.9E-08 2.7E-12 95.6 22.9 248 144-406 115-408 (426)
109 3nol_A Glutamine cyclotransfer 99.0 4.1E-07 1.4E-11 83.6 25.9 192 150-397 44-254 (262)
110 3nok_A Glutaminyl cyclase; bet 99.0 9.7E-08 3.3E-12 87.8 21.5 191 150-397 56-264 (268)
111 3mbr_X Glutamine cyclotransfer 99.0 1.2E-06 4.1E-11 79.8 27.9 193 149-397 21-233 (243)
112 1jmx_B Amine dehydrogenase; ox 99.0 5.1E-07 1.8E-11 86.5 27.2 102 153-258 4-112 (349)
113 2vh0_B Activated factor XA lig 98.9 2.7E-10 9.2E-15 94.8 3.3 81 29-113 41-124 (134)
114 1nir_A Nitrite reductase; hemo 98.9 6.7E-07 2.3E-11 92.4 28.7 194 155-403 144-358 (543)
115 2ece_A 462AA long hypothetical 98.9 6.1E-07 2.1E-11 88.7 26.7 219 145-400 134-426 (462)
116 3h5c_B Vitamin K-dependent pro 98.9 9.6E-10 3.3E-14 105.8 6.3 82 30-115 5-89 (317)
117 2c4f_L Coagulation factor VII 98.9 1.1E-09 3.9E-14 92.0 6.0 79 29-113 46-132 (142)
118 2wg3_C Hedgehog-interacting pr 98.9 3.4E-07 1.1E-11 92.2 24.8 267 142-441 7-354 (463)
119 1nir_A Nitrite reductase; hemo 98.9 8.8E-07 3E-11 91.5 28.1 201 145-398 176-401 (543)
120 1mda_H Methylamine dehydrogena 98.9 3.7E-07 1.3E-11 89.2 23.9 250 159-446 30-339 (368)
121 1mda_H Methylamine dehydrogena 98.8 8.1E-08 2.8E-12 93.9 17.3 235 144-403 62-349 (368)
122 3no2_A Uncharacterized protein 98.8 3E-06 1E-10 79.5 27.5 219 161-443 5-233 (276)
123 1pby_B Quinohemoprotein amine 98.8 8.6E-07 2.9E-11 84.4 24.3 187 162-390 2-196 (337)
124 2oiz_A Aromatic amine dehydrog 98.8 2E-06 6.8E-11 84.0 26.9 98 160-262 15-133 (361)
125 2oiz_A Aromatic amine dehydrog 98.8 2.6E-06 9E-11 83.1 27.5 235 149-401 51-335 (361)
126 2w86_A Fibrillin-1, fibrillin1 98.8 2.2E-09 7.6E-14 90.9 4.5 57 51-108 88-146 (147)
127 1qks_A Cytochrome CD1 nitrite 98.8 4.7E-06 1.6E-10 86.3 30.3 221 155-398 162-420 (567)
128 3sjl_D Methylamine dehydrogena 98.8 6.7E-07 2.3E-11 87.5 22.4 247 144-407 75-370 (386)
129 1yo8_A Thrombospondin-2; EGF, 98.7 9.3E-09 3.2E-13 105.9 6.9 97 17-115 29-154 (634)
130 1dx5_I Thrombomodulin; serine 98.7 8.8E-09 3E-13 83.6 5.4 79 29-116 3-85 (118)
131 1jmx_B Amine dehydrogenase; ox 98.7 1.3E-05 4.6E-10 76.4 28.8 224 150-397 44-323 (349)
132 3nok_A Glutaminyl cyclase; bet 98.7 2.5E-06 8.4E-11 78.4 22.0 193 194-441 57-254 (268)
133 1fwx_A Nitrous oxide reductase 98.7 1.1E-06 3.9E-11 89.7 21.7 259 159-446 100-413 (595)
134 2jkh_L Factor X light chain; p 98.7 4.5E-09 1.5E-13 72.5 2.6 45 31-75 2-46 (55)
135 1kli_L Factor VIIA; extrinsic 98.7 6.7E-09 2.3E-13 74.9 3.3 48 68-115 2-51 (69)
136 3nol_A Glutamine cyclotransfer 98.7 3.8E-06 1.3E-10 77.2 21.8 192 195-442 46-245 (262)
137 1kli_L Factor VIIA; extrinsic 98.7 7.1E-09 2.4E-13 74.8 2.8 47 29-75 4-51 (69)
138 2wg3_C Hedgehog-interacting pr 98.7 9.3E-07 3.2E-11 89.0 19.3 177 184-387 6-242 (463)
139 1yo8_A Thrombospondin-2; EGF, 98.7 2.8E-08 9.5E-13 102.4 7.7 84 30-115 3-106 (634)
140 3mbr_X Glutamine cyclotransfer 98.7 9.5E-06 3.2E-10 73.8 23.6 192 194-441 23-223 (243)
141 2ece_A 462AA long hypothetical 98.6 1.1E-05 3.6E-10 79.9 24.4 248 159-440 94-399 (462)
142 2mad_H Methylamine dehydrogena 98.6 1.8E-05 6.3E-10 77.5 26.3 208 149-404 125-354 (373)
143 2vj3_A Neurogenic locus notch 98.6 4.2E-08 1.4E-12 81.6 6.2 102 4-115 7-125 (135)
144 2ojh_A Uncharacterized protein 98.6 7.6E-06 2.6E-10 75.7 22.2 235 150-443 43-293 (297)
145 3q6k_A 43.2 kDa salivary prote 98.6 8.7E-05 3E-09 72.1 29.7 255 150-445 27-346 (381)
146 2jkh_L Factor X light chain; p 98.6 2.7E-08 9.2E-13 68.6 3.1 44 72-115 2-46 (55)
147 3q6k_A 43.2 kDa salivary prote 98.6 1.1E-05 3.9E-10 78.3 22.8 193 146-390 84-345 (381)
148 1uzk_A Fibrillin-1; glycoprote 98.6 1E-08 3.6E-13 88.2 1.2 92 17-108 27-161 (162)
149 1uzk_A Fibrillin-1; glycoprote 98.6 4E-08 1.4E-12 84.5 4.8 71 29-100 2-84 (162)
150 1kig_L Factor XA; glycoprotein 98.6 2.3E-08 7.8E-13 67.7 2.5 42 33-74 1-42 (51)
151 2wph_E Coagulation factor IXA 98.6 4.2E-08 1.4E-12 68.5 3.7 52 33-88 2-54 (59)
152 3amr_A 3-phytase; beta-propell 98.5 5.3E-05 1.8E-09 72.5 25.4 188 162-398 41-262 (355)
153 1fwx_A Nitrous oxide reductase 98.5 9.7E-06 3.3E-10 82.9 21.5 248 116-410 102-440 (595)
154 1qks_A Cytochrome CD1 nitrite 98.5 0.00022 7.4E-09 73.8 31.9 228 150-398 198-476 (567)
155 2hqs_A Protein TOLB; TOLB, PAL 98.5 0.00011 3.9E-09 72.8 28.9 209 149-407 179-393 (415)
156 2hqs_A Protein TOLB; TOLB, PAL 98.5 3.3E-05 1.1E-09 76.7 24.9 181 171-398 159-343 (415)
157 2bz6_L Blood coagulation facto 98.5 3.9E-08 1.3E-12 67.1 2.4 42 33-74 2-44 (53)
158 3no2_A Uncharacterized protein 98.4 3E-05 1E-09 72.6 21.6 183 150-387 38-231 (276)
159 1kig_L Factor XA; glycoprotein 98.4 1.3E-07 4.5E-12 63.9 3.6 40 76-115 4-43 (51)
160 2ojh_A Uncharacterized protein 98.4 6.3E-05 2.2E-09 69.4 22.9 185 170-405 21-210 (297)
161 3amr_A 3-phytase; beta-propell 98.4 0.00031 1.1E-08 67.2 26.8 154 162-352 88-271 (355)
162 2vj3_A Neurogenic locus notch 98.4 3.8E-07 1.3E-11 75.8 5.7 78 29-115 4-87 (135)
163 2bz6_L Blood coagulation facto 98.4 2E-07 6.8E-12 63.5 3.0 40 76-115 5-45 (53)
164 1tpg_A T-plasminogen activator 98.3 2.6E-07 8.8E-12 71.0 3.6 75 17-109 5-85 (91)
165 4d90_A EGF-like repeat and dis 98.3 6.8E-07 2.3E-11 75.0 5.5 66 30-100 52-127 (143)
166 3o4h_A Acylamino-acid-releasin 98.3 2.4E-05 8.2E-10 81.1 18.4 197 151-398 24-226 (582)
167 1apq_A Complement protease C1R 98.3 4.7E-07 1.6E-11 61.9 3.0 42 69-110 2-52 (53)
168 2bou_A EGF-like module contain 98.2 6.4E-07 2.2E-11 75.2 4.2 70 43-115 14-100 (143)
169 1gxr_A ESG1, transducin-like e 98.2 0.0037 1.3E-07 58.6 36.3 198 150-403 99-299 (337)
170 3pe7_A Oligogalacturonate lyas 98.2 0.00046 1.6E-08 66.9 25.0 249 153-447 85-376 (388)
171 1z1y_A Ookinete surface protei 98.2 4.6E-07 1.6E-11 79.8 2.0 76 28-107 89-176 (186)
172 2wph_E Coagulation factor IXA 98.2 1.2E-06 4E-11 61.0 3.3 38 76-113 5-43 (59)
173 3dpr_E LDL-receptor class A 3; 98.1 1.4E-06 4.9E-11 55.0 3.1 26 2-28 12-37 (39)
174 1apq_A Complement protease C1R 98.1 1.9E-06 6.5E-11 58.8 3.8 42 29-70 3-52 (53)
175 1z1y_A Ookinete surface protei 98.1 2.7E-06 9.1E-11 74.8 5.5 73 39-115 12-95 (186)
176 2ecf_A Dipeptidyl peptidase IV 98.1 0.00045 1.5E-08 73.5 23.3 214 150-407 38-328 (741)
177 1k7b_A Subgroup A ROUS sarcoma 98.1 9.8E-07 3.3E-11 58.3 1.3 26 2-28 21-46 (47)
178 1ajj_A LR5, low-density lipopr 98.0 1E-06 3.4E-11 55.0 1.2 26 2-28 11-36 (37)
179 2fyj_A Low-density lipoprotein 98.0 2E-06 6.9E-11 64.3 2.9 40 2-41 14-54 (82)
180 1cr8_A Protein (LOW density li 98.0 1.8E-06 6.2E-11 55.5 2.1 26 2-28 14-39 (42)
181 3azo_A Aminopeptidase; POP fam 98.0 0.00068 2.3E-08 71.1 23.0 205 158-405 88-329 (662)
182 3pe7_A Oligogalacturonate lyas 98.0 0.0016 5.6E-08 63.0 23.6 224 154-403 41-276 (388)
183 2xyi_A Probable histone-bindin 98.0 0.0015 5E-08 64.8 23.6 199 150-398 130-352 (430)
184 3a7q_B Low-density lipoprotein 97.9 2.3E-06 8E-11 55.5 1.5 26 2-28 17-42 (44)
185 1jrf_A TVA LDL-A module, subgr 97.9 1.6E-06 5.6E-11 57.3 0.6 26 2-28 19-44 (47)
186 1d2l_A Lipoprotein receptor re 97.9 3.3E-06 1.1E-10 55.0 2.0 24 2-25 15-38 (45)
187 4gqb_B Methylosome protein 50; 97.9 0.0042 1.4E-07 59.7 25.0 233 151-448 85-326 (344)
188 2knx_A Prolow-density lipoprot 97.9 2.6E-06 8.9E-11 56.8 1.3 26 2-28 17-42 (50)
189 2jm4_A Relaxin receptor 1; LDL 97.9 3.1E-06 1E-10 54.7 1.6 25 3-28 18-42 (43)
190 2z3z_A Dipeptidyl aminopeptida 97.9 0.002 6.7E-08 68.1 24.5 203 150-398 122-390 (706)
191 2ymu_A WD-40 repeat protein; u 97.9 0.01 3.5E-07 60.7 29.2 199 150-407 346-545 (577)
192 3hxj_A Pyrrolo-quinoline quino 97.9 0.0057 2E-07 57.6 25.1 209 160-446 107-317 (330)
193 1gxr_A ESG1, transducin-like e 97.9 0.014 4.8E-07 54.6 27.3 192 150-397 53-253 (337)
194 2vdu_B TRNA (guanine-N(7)-)-me 97.9 0.011 3.6E-07 58.8 27.7 240 150-441 104-372 (450)
195 3azo_A Aminopeptidase; POP fam 97.9 0.0015 5E-08 68.5 22.0 209 151-397 26-272 (662)
196 2fcw_B LDL receptor, low-densi 97.9 1.7E-06 5.9E-11 64.2 -0.4 39 2-41 12-50 (80)
197 2ymu_A WD-40 repeat protein; u 97.9 0.019 6.4E-07 58.6 30.0 199 150-407 305-504 (577)
198 2ecf_A Dipeptidyl peptidase IV 97.8 0.0021 7.2E-08 68.3 23.1 261 151-443 111-401 (741)
199 4d90_A EGF-like repeat and dis 97.8 1.1E-05 3.8E-10 67.5 3.8 75 32-115 2-101 (143)
200 2z3z_A Dipeptidyl aminopeptida 97.8 0.0047 1.6E-07 65.2 25.1 264 150-444 83-378 (706)
201 3c5m_A Oligogalacturonate lyas 97.8 0.002 7E-08 62.3 20.5 227 151-403 38-276 (396)
202 2m0p_A Low-density lipoprotein 97.8 2.7E-06 9.4E-11 56.8 -0.4 26 2-28 16-41 (52)
203 2kny_A LRP-1, linker, APO-E; l 97.8 4.4E-06 1.5E-10 61.8 0.4 39 2-40 19-60 (80)
204 2pm9_A Protein WEB1, protein t 97.7 0.0067 2.3E-07 59.0 22.7 210 150-407 69-301 (416)
205 1x7a_L Coagulation factor IX, 97.7 1.6E-05 5.5E-10 66.7 2.9 56 18-74 73-130 (146)
206 1emn_A Fibrillin; extracellula 97.7 2.2E-05 7.4E-10 58.8 3.3 47 67-115 1-48 (82)
207 4g56_B MGC81050 protein; prote 97.7 0.011 3.9E-07 56.8 23.4 204 150-404 141-348 (357)
208 3hxj_A Pyrrolo-quinoline quino 97.7 0.0025 8.4E-08 60.1 18.2 185 152-405 63-248 (330)
209 1lmj_A Fibrillin 1; EGF, calci 97.6 2.5E-05 8.6E-10 59.1 3.0 52 17-68 28-85 (86)
210 2vdu_B TRNA (guanine-N(7)-)-me 97.6 0.063 2.2E-06 53.1 28.9 162 193-407 104-278 (450)
211 2i1p_A Low-density lipoprotein 97.6 6E-06 2E-10 54.7 -0.6 27 2-29 16-43 (48)
212 4g56_B MGC81050 protein; prote 97.6 0.0067 2.3E-07 58.4 20.6 194 151-397 97-299 (357)
213 1j8e_A Low-density lipoprotein 97.6 1E-05 3.4E-10 52.5 0.2 24 2-25 14-37 (44)
214 2aq5_A Coronin-1A; WD40 repeat 97.5 0.027 9.1E-07 54.8 24.4 222 163-447 49-293 (402)
215 3o4h_A Acylamino-acid-releasin 97.5 0.005 1.7E-07 63.5 19.9 193 151-397 67-274 (582)
216 2w2n_E LDL receptor, low-densi 97.5 4.7E-05 1.6E-09 60.1 3.4 49 65-115 24-73 (107)
217 1aut_L Activated protein C; se 97.5 8.2E-05 2.8E-09 59.5 4.8 55 18-73 39-97 (114)
218 1k32_A Tricorn protease; prote 97.5 0.017 5.9E-07 64.1 25.3 150 152-333 341-492 (1045)
219 3c5m_A Oligogalacturonate lyas 97.5 0.0023 7.8E-08 61.9 16.1 193 169-397 166-382 (396)
220 3mkq_A Coatomer beta'-subunit; 97.5 0.13 4.4E-06 54.8 31.2 201 150-403 15-220 (814)
221 2aq5_A Coronin-1A; WD40 repeat 97.5 0.069 2.4E-06 51.8 26.6 199 150-398 83-298 (402)
222 3ei3_B DNA damage-binding prot 97.5 0.027 9.2E-07 54.2 23.3 197 150-398 75-281 (383)
223 2xyi_A Probable histone-bindin 97.5 0.018 6.1E-07 56.8 22.4 199 150-397 183-408 (430)
224 3mkq_A Coatomer beta'-subunit; 97.5 0.14 4.8E-06 54.5 31.0 195 150-397 57-257 (814)
225 1pgu_A Actin interacting prote 97.5 0.047 1.6E-06 55.9 26.0 205 150-406 20-244 (615)
226 4gqb_B Methylosome protein 50; 97.4 0.088 3E-06 50.3 26.8 197 150-397 129-329 (344)
227 1xfd_A DIP, dipeptidyl aminope 97.4 0.0091 3.1E-07 63.1 20.7 98 294-397 280-393 (723)
228 1szb_A Mannose binding lectin- 97.4 7.6E-05 2.6E-09 64.3 3.7 45 67-111 120-168 (170)
229 1z6c_A Vitamin K-dependent pro 97.4 8.3E-05 2.8E-09 56.3 3.4 46 70-115 2-49 (87)
230 3h5c_B Vitamin K-dependent pro 97.4 0.00025 8.6E-09 67.6 7.2 58 17-75 29-89 (317)
231 2gop_A Trilobed protease; beta 97.4 0.026 8.7E-07 53.5 21.4 96 150-256 16-122 (347)
232 1k32_A Tricorn protease; prote 97.4 0.017 5.8E-07 64.2 22.7 221 153-442 249-492 (1045)
233 2gtl_O Extracellular hemoglobi 97.4 1.5E-05 5.3E-10 70.0 -1.5 36 2-38 66-101 (215)
234 3ow8_A WD repeat-containing pr 97.4 0.1 3.5E-06 49.1 30.7 198 151-403 83-282 (321)
235 1nfu_B Coagulation factor XA, 97.4 7E-05 2.4E-09 65.7 2.5 55 17-72 66-123 (195)
236 4aez_A CDC20, WD repeat-contai 97.3 0.13 4.5E-06 49.9 32.2 198 154-407 97-300 (401)
237 2vh0_B Activated factor XA lig 97.3 8.1E-05 2.8E-09 61.4 2.5 56 17-73 66-124 (134)
238 3f1s_B Vitamin K-dependent pro 97.3 0.00011 3.6E-09 69.1 3.7 46 30-75 2-48 (283)
239 2gtl_N Extracellular hemoglobi 97.3 6.3E-05 2.2E-09 65.5 1.8 28 2-29 64-92 (220)
240 3f1s_B Vitamin K-dependent pro 97.3 0.00014 4.7E-09 68.3 4.2 46 70-115 1-48 (283)
241 2pm9_A Protein WEB1, protein t 97.3 0.034 1.2E-06 53.8 21.7 203 150-398 115-336 (416)
242 1r5m_A SIR4-interacting protei 97.3 0.14 4.7E-06 49.4 27.5 196 150-403 110-322 (425)
243 1k8k_C P40, ARP2/3 complex 41 97.3 0.14 4.8E-06 48.5 28.3 201 151-407 11-240 (372)
244 2w86_A Fibrillin-1, fibrillin1 97.2 7.6E-05 2.6E-09 62.7 1.3 56 14-69 88-147 (147)
245 1r5m_A SIR4-interacting protei 97.2 0.11 3.9E-06 49.9 24.5 193 150-398 151-360 (425)
246 1xfd_A DIP, dipeptidyl aminope 97.2 0.035 1.2E-06 58.5 21.8 230 151-396 63-341 (723)
247 4aez_A CDC20, WD repeat-contai 97.2 0.19 6.5E-06 48.7 34.2 196 150-398 136-335 (401)
248 2xdw_A Prolyl endopeptidase; a 97.2 0.19 6.4E-06 53.1 27.3 209 158-398 81-319 (710)
249 2fyj_A Low-density lipoprotein 97.1 0.00014 4.7E-09 54.2 1.8 26 2-28 55-80 (82)
250 2xdw_A Prolyl endopeptidase; a 97.1 0.11 3.9E-06 54.7 25.1 209 151-403 127-371 (710)
251 3zwl_B Eukaryotic translation 97.1 0.18 6.2E-06 47.4 31.3 215 150-407 34-256 (369)
252 2c4f_L Coagulation factor VII 97.1 0.00028 9.7E-09 58.7 3.6 56 17-73 71-132 (142)
253 2vj2_A Jagged-1; signalling, p 97.1 0.00019 6.4E-09 61.8 2.4 73 17-100 86-163 (169)
254 1szb_A Mannose binding lectin- 97.1 0.00025 8.5E-09 61.1 3.1 43 29-71 123-168 (170)
255 1yr2_A Prolyl oligopeptidase; 97.1 0.44 1.5E-05 50.5 28.9 243 158-447 116-387 (741)
256 1k8k_C P40, ARP2/3 complex 41 97.0 0.22 7.7E-06 47.0 31.4 193 150-397 54-272 (372)
257 4ery_A WD repeat-containing pr 97.0 0.22 7.5E-06 46.1 31.3 193 151-397 26-221 (312)
258 4a9v_A PHOX; hydrolase, beta-p 97.0 0.0063 2.1E-07 61.7 12.6 110 145-257 380-550 (592)
259 1nzi_A Complement C1S componen 97.0 0.00037 1.3E-08 59.2 3.1 44 67-110 113-158 (159)
260 1vyh_C Platelet-activating fac 97.0 0.32 1.1E-05 47.3 28.7 102 150-256 110-211 (410)
261 1vyh_C Platelet-activating fac 96.9 0.33 1.1E-05 47.3 27.8 202 150-406 152-375 (410)
262 2kl7_A Fibulin-4; secreted, ca 96.9 0.00082 2.8E-08 48.4 4.0 67 29-110 2-71 (71)
263 3i2n_A WD repeat-containing pr 96.9 0.28 9.6E-06 45.9 26.7 197 150-398 67-290 (357)
264 3vl1_A 26S proteasome regulato 96.9 0.35 1.2E-05 46.7 30.5 95 160-258 108-202 (420)
265 1gl4_A Nidogen-1, entactin; im 96.9 0.00022 7.4E-09 65.6 0.9 45 29-75 4-50 (285)
266 1edm_B Factor IX; epidermal gr 96.9 0.00062 2.1E-08 42.7 2.8 36 30-69 3-38 (39)
267 2bkl_A Prolyl endopeptidase; m 96.9 0.26 8.8E-06 51.9 24.8 241 158-448 77-344 (695)
268 2k2s_B Micronemal protein 6; m 96.8 0.0002 6.8E-09 49.8 0.4 43 30-75 11-55 (61)
269 2gtl_M Hemoglobin linker chain 96.8 0.0003 1E-08 61.9 1.2 24 2-25 65-88 (217)
270 3ei3_B DNA damage-binding prot 96.8 0.39 1.3E-05 45.8 23.5 154 192-398 74-235 (383)
271 2gop_A Trilobed protease; beta 96.8 0.37 1.3E-05 45.2 23.3 98 150-255 60-187 (347)
272 2fcw_B LDL receptor, low-densi 96.8 0.00025 8.6E-09 52.4 0.3 24 2-25 51-74 (80)
273 3i2n_A WD repeat-containing pr 96.7 0.22 7.6E-06 46.6 21.2 76 150-228 20-101 (357)
274 4a9v_A PHOX; hydrolase, beta-p 96.7 0.013 4.3E-07 59.5 12.5 119 189-333 381-551 (592)
275 1yr2_A Prolyl oligopeptidase; 96.7 0.4 1.4E-05 50.8 24.6 206 151-404 165-398 (741)
276 1gl4_A Nidogen-1, entactin; im 96.6 0.00052 1.8E-08 63.1 1.6 45 69-115 3-50 (285)
277 3iuj_A Prolyl endopeptidase; h 96.6 0.71 2.4E-05 48.5 26.1 207 154-409 180-413 (693)
278 3u7u_G Neuregulin 1; signaling 96.6 0.0011 3.9E-08 44.9 2.7 37 29-69 7-48 (55)
279 2xe4_A Oligopeptidase B; hydro 96.6 0.47 1.6E-05 50.5 24.4 193 159-398 125-353 (751)
280 2kl7_A Fibulin-4; secreted, ca 96.6 0.0013 4.5E-08 47.4 3.0 40 69-108 1-44 (71)
281 4e54_B DNA damage-binding prot 96.5 0.12 4E-06 50.9 18.4 197 150-397 121-325 (435)
282 3zwl_B Eukaryotic translation 96.5 0.55 1.9E-05 44.0 35.3 187 150-389 76-281 (369)
283 3v9f_A Two-component system se 96.5 0.79 2.7E-05 48.8 25.7 186 151-397 409-609 (781)
284 1sq9_A Antiviral protein SKI8; 96.5 0.65 2.2E-05 44.3 26.2 99 151-257 19-146 (397)
285 3dm0_A Maltose-binding peripla 96.4 1.1 3.8E-05 46.8 27.1 197 149-397 383-590 (694)
286 1nr0_A Actin interacting prote 96.4 0.96 3.3E-05 46.6 24.9 203 150-405 20-226 (611)
287 1nzi_A Complement C1S componen 96.4 0.0019 6.4E-08 54.7 3.3 42 29-70 116-158 (159)
288 1pgu_A Actin interacting prote 96.3 1.1 3.7E-05 45.5 31.5 201 151-406 67-289 (615)
289 3dwl_C Actin-related protein 2 96.3 0.2 7E-06 47.6 18.1 194 151-398 14-235 (377)
290 3ow8_A WD repeat-containing pr 96.3 0.7 2.4E-05 43.2 30.1 184 161-397 48-235 (321)
291 4aow_A Guanine nucleotide-bind 96.3 0.67 2.3E-05 42.9 28.1 102 150-255 40-146 (340)
292 3jrp_A Fusion protein of prote 96.2 0.82 2.8E-05 43.0 28.2 197 150-398 13-239 (379)
293 2ynn_A Coatomer subunit beta'; 96.2 0.77 2.6E-05 42.4 30.1 102 150-256 15-116 (304)
294 4ery_A WD repeat-containing pr 96.2 0.76 2.6E-05 42.3 31.8 195 150-397 67-266 (312)
295 3odt_A Protein DOA1; ubiquitin 96.2 0.73 2.5E-05 42.0 27.1 99 151-257 21-122 (313)
296 3frx_A Guanine nucleotide-bind 96.2 0.83 2.8E-05 42.5 28.5 195 151-397 20-225 (319)
297 1tpg_A T-plasminogen activator 96.2 0.004 1.4E-07 47.3 3.8 50 17-73 35-90 (91)
298 1g1s_A P-selectin; selectin, l 96.1 0.0011 3.7E-08 56.4 0.6 45 27-75 116-160 (162)
299 4a11_B DNA excision repair pro 96.1 0.96 3.3E-05 43.0 24.5 109 150-260 101-209 (408)
300 4a5s_A Dipeptidyl peptidase 4 96.1 0.81 2.8E-05 48.4 22.7 96 154-255 67-188 (740)
301 2bkl_A Prolyl endopeptidase; m 96.0 1.8 6.2E-05 45.3 25.7 202 151-403 123-353 (695)
302 3jrp_A Fusion protein of prote 96.0 1.1 3.6E-05 42.2 27.1 196 151-398 58-286 (379)
303 4a2l_A BT_4663, two-component 96.0 2.2 7.4E-05 45.5 26.0 184 150-397 407-612 (795)
304 3k26_A Polycomb protein EED; W 95.9 0.97 3.3E-05 42.2 20.6 146 150-332 20-181 (366)
305 3vl1_A 26S proteasome regulato 95.9 1.3 4.6E-05 42.4 26.8 72 150-226 141-212 (420)
306 4e54_B DNA damage-binding prot 95.8 0.23 7.9E-06 48.7 16.2 154 193-397 121-280 (435)
307 3v9f_A Two-component system se 95.8 2.2 7.7E-05 45.3 24.6 224 151-445 315-560 (781)
308 3iuj_A Prolyl endopeptidase; h 95.7 2.4 8.3E-05 44.4 29.3 208 150-406 130-364 (693)
309 3jro_A Fusion protein of prote 95.7 2.6 9E-05 44.6 24.6 196 151-398 12-237 (753)
310 2xrc_A Human complement factor 95.6 0.0057 2E-07 63.0 3.4 37 2-41 213-249 (565)
311 1egf_A Epidermal growth factor 95.6 0.0075 2.6E-07 40.5 2.8 37 30-70 3-44 (53)
312 1hae_A Heregulin-alpha; growth 95.6 0.0054 1.8E-07 42.9 2.1 41 31-75 7-53 (63)
313 4a5s_A Dipeptidyl peptidase 4 95.6 2.2 7.5E-05 45.0 23.5 73 317-404 323-403 (740)
314 2ynn_A Coatomer subunit beta'; 95.5 1.5 5.2E-05 40.3 29.4 103 151-258 58-161 (304)
315 3ojy_A Complement component C8 95.5 0.0073 2.5E-07 61.6 3.5 27 2-29 75-101 (554)
316 1sq9_A Antiviral protein SKI8; 95.4 1.9 6.5E-05 40.9 32.4 206 150-407 64-329 (397)
317 4h5i_A Guanine nucleotide-exch 95.3 2.1 7.2E-05 40.7 21.0 196 151-397 136-341 (365)
318 3ojy_B Complement component C8 95.3 0.0084 2.9E-07 61.1 3.2 27 2-29 76-102 (537)
319 1z68_A Fibroblast activation p 95.3 0.16 5.6E-06 53.4 13.4 97 151-256 62-187 (719)
320 1erj_A Transcriptional repress 95.2 2.4 8.2E-05 40.6 30.4 241 151-448 126-384 (393)
321 3dwl_C Actin-related protein 2 95.1 0.95 3.3E-05 42.8 17.4 103 150-257 57-166 (377)
322 4fbr_A Lectin, myxobacterial h 95.1 0.0013 4.4E-08 60.1 -3.0 66 31-100 100-196 (267)
323 1tl2_A L10, protein (tachylect 95.0 1.8 6.3E-05 38.3 18.2 65 184-255 33-104 (236)
324 3mmy_A MRNA export factor; mRN 94.9 2.5 8.4E-05 39.3 26.9 100 150-254 41-146 (368)
325 1a3p_A Epidermal growth factor 94.8 0.019 6.7E-07 37.0 2.9 24 42-69 15-40 (45)
326 3dw8_B Serine/threonine-protei 94.8 3.1 0.00011 40.1 24.2 69 315-398 229-314 (447)
327 4a11_B DNA excision repair pro 94.7 2.9 0.0001 39.5 25.7 95 150-248 45-152 (408)
328 1z68_A Fibroblast activation p 94.7 0.1 3.5E-06 54.9 9.9 87 164-256 29-128 (719)
329 1yfq_A Cell cycle arrest prote 94.7 2.7 9.1E-05 38.8 22.1 99 151-257 14-120 (342)
330 1edm_B Factor IX; epidermal gr 94.7 0.015 5.2E-07 36.1 2.0 30 70-100 2-33 (39)
331 1sqj_A OXG-RCBH, oligoxylogluc 94.7 4.9 0.00017 42.8 22.9 106 150-256 16-140 (789)
332 3b7f_A Glycosyl hydrolase, BNR 94.5 3.6 0.00012 39.5 20.2 103 150-257 56-197 (394)
333 3k26_A Polycomb protein EED; W 94.3 3.3 0.00011 38.4 25.4 104 151-257 72-181 (366)
334 3sfz_A APAF-1, apoptotic pepti 94.3 8.5 0.00029 43.0 26.2 220 151-397 801-1032(1249)
335 1tl2_A L10, protein (tachylect 94.3 2 6.8E-05 38.0 15.4 101 146-256 38-152 (236)
336 3sfz_A APAF-1, apoptotic pepti 94.3 8.6 0.00029 42.9 31.7 97 149-250 616-712 (1249)
337 2ygq_A WIF-1, WNT inhibitory f 94.1 0.021 7.1E-07 54.3 2.5 69 15-100 198-270 (324)
338 1n1i_A Merozoite surface prote 94.0 0.057 2E-06 41.1 4.3 56 43-100 23-84 (105)
339 3a0f_A Xyloglucanase; beta-pro 93.9 7.6 0.00026 41.2 23.4 105 150-256 22-152 (763)
340 3jro_A Fusion protein of prote 93.9 6.5 0.00022 41.5 21.9 94 151-248 56-156 (753)
341 1yfq_A Cell cycle arrest prote 93.9 3.9 0.00013 37.6 25.4 196 149-403 57-285 (342)
342 3iz6_a 40S ribosomal protein R 93.8 4.7 0.00016 38.3 24.0 193 153-397 162-373 (380)
343 2k2s_B Micronemal protein 6; m 93.6 0.017 5.7E-07 40.0 0.7 33 67-100 7-43 (61)
344 2xe4_A Oligopeptidase B; hydro 93.6 4.8 0.00016 42.6 20.1 151 207-398 128-303 (751)
345 2gy5_A Angiopoietin-1 receptor 93.5 0.046 1.6E-06 53.9 3.9 50 43-100 210-272 (423)
346 1k36_A Epiregulin; EGF-like fo 93.5 0.021 7.2E-07 37.0 0.9 26 40-69 14-42 (46)
347 4a2l_A BT_4663, two-component 93.5 9.2 0.00031 40.5 26.1 223 151-447 359-609 (795)
348 3b7f_A Glycosyl hydrolase, BNR 93.4 5.8 0.0002 38.0 20.9 102 150-256 116-251 (394)
349 1egf_A Epidermal growth factor 93.3 0.038 1.3E-06 37.0 2.1 36 70-109 2-43 (53)
350 1ob1_C Major merozoite surface 93.1 0.075 2.6E-06 40.2 3.6 56 43-100 17-83 (99)
351 2xzm_R RACK1; ribosome, transl 92.9 6 0.0002 36.9 27.2 94 160-257 38-138 (343)
352 2pbi_B Guanine nucleotide-bind 92.7 6.6 0.00023 36.9 31.3 195 150-397 66-269 (354)
353 3u7u_G Neuregulin 1; signaling 92.7 0.039 1.3E-06 37.2 1.4 36 69-109 6-48 (55)
354 2pbi_B Guanine nucleotide-bind 92.7 6.6 0.00023 36.9 25.8 182 151-385 157-344 (354)
355 3frx_A Guanine nucleotide-bind 92.7 6.1 0.00021 36.4 28.3 192 150-397 67-265 (319)
356 3fm0_A Protein CIAO1; WDR39,SG 92.7 6.5 0.00022 36.7 22.5 101 151-256 19-124 (345)
357 2ygq_A WIF-1, WNT inhibitory f 92.6 0.069 2.4E-06 50.7 3.6 70 15-101 166-239 (324)
358 3f3f_A Nucleoporin SEH1; struc 92.6 5.8 0.0002 36.1 24.1 103 150-257 13-132 (351)
359 3v7d_B Cell division control p 92.6 8 0.00027 37.5 30.1 73 151-227 165-237 (464)
360 2gy5_A Angiopoietin-1 receptor 92.6 0.088 3E-06 51.9 4.3 52 47-109 259-319 (423)
361 3iz6_a 40S ribosomal protein R 92.5 7.5 0.00026 36.9 26.0 202 150-405 68-285 (380)
362 3f3f_A Nucleoporin SEH1; struc 92.4 6.2 0.00021 35.9 28.2 72 150-225 59-142 (351)
363 3zwu_A Alkaline phosphatase PH 92.4 1.3 4.3E-05 45.5 12.8 107 146-255 381-548 (592)
364 1got_B GT-beta; complex (GTP-b 92.3 7.1 0.00024 36.3 30.9 193 150-397 57-255 (340)
365 2vj2_A Jagged-1; signalling, p 92.3 0.043 1.5E-06 46.8 1.6 79 17-114 53-134 (169)
366 1erj_A Transcriptional repress 92.2 8.2 0.00028 36.8 30.5 152 194-397 126-285 (393)
367 3v7d_B Cell division control p 91.9 9.7 0.00033 36.9 30.3 226 150-446 205-456 (464)
368 2oit_A Nucleoporin 214KDA; NH2 91.7 10 0.00036 36.9 22.6 106 150-258 94-213 (434)
369 3fcs_B Integrin beta-3; beta p 91.5 0.075 2.6E-06 55.6 2.5 42 51-100 504-554 (690)
370 1got_B GT-beta; complex (GTP-b 91.2 9.5 0.00032 35.4 29.8 89 164-256 157-245 (340)
371 3sbq_A Nitrous-oxide reductase 91.1 10 0.00035 38.4 17.1 171 205-398 142-353 (638)
372 1nr0_A Actin interacting prote 90.9 15 0.00052 37.4 27.7 103 150-256 149-258 (611)
373 2cn3_A Xyloglucanase, beta-1,4 90.7 19 0.00063 38.0 22.4 105 150-256 24-151 (737)
374 2oit_A Nucleoporin 214KDA; NH2 90.5 13 0.00045 36.2 17.7 64 193-259 94-171 (434)
375 1p22_A F-BOX/WD-repeat protein 90.4 13 0.00045 35.8 26.3 90 160-257 182-274 (435)
376 1p22_A F-BOX/WD-repeat protein 90.3 13 0.00046 35.7 27.8 89 160-256 142-230 (435)
377 3gre_A Serine/threonine-protei 90.0 14 0.00047 35.4 24.0 104 150-258 113-235 (437)
378 3cfw_A L-selectin; EGF, cell a 90.0 0.09 3.1E-06 44.3 1.2 43 28-74 117-159 (164)
379 3zwu_A Alkaline phosphatase PH 89.9 2.7 9.2E-05 43.1 12.3 114 315-440 386-549 (592)
380 3ca7_A Protein spitz; argos, E 89.3 0.032 1.1E-06 37.2 -1.7 40 51-108 3-46 (52)
381 4aow_A Guanine nucleotide-bind 89.3 13 0.00043 33.9 26.8 74 150-228 88-161 (340)
382 3odt_A Protein DOA1; ubiquitin 88.9 13 0.00043 33.4 28.8 197 149-407 60-262 (313)
383 3gre_A Serine/threonine-protei 88.7 17 0.00059 34.7 25.7 70 150-224 65-140 (437)
384 2ad6_A Methanol dehydrogenase 88.6 23 0.00078 36.0 28.0 111 316-441 389-525 (571)
385 1nt0_A MAsp2, mannose-binding 88.3 0.24 8.2E-06 46.0 2.9 40 70-109 119-162 (286)
386 1k36_A Epiregulin; EGF-like fo 87.9 0.2 6.7E-06 32.3 1.4 35 71-109 3-42 (46)
387 3dw8_B Serine/threonine-protei 87.9 19 0.00066 34.3 21.3 102 150-257 179-305 (447)
388 2ovr_B FBW7, F-BOX/WD repeat p 87.5 21 0.00072 34.3 29.7 94 152-256 163-256 (445)
389 3fcs_B Integrin beta-3; beta p 87.1 0.26 9E-06 51.5 2.6 68 26-109 519-599 (690)
390 3t5o_A Complement component C6 87.0 0.19 6.4E-06 54.7 1.5 27 2-29 127-153 (913)
391 4fbr_A Lectin, myxobacterial h 86.7 0.049 1.7E-06 49.6 -2.7 54 42-99 178-232 (267)
392 1kb0_A Quinohemoprotein alcoho 86.6 33 0.0011 35.6 30.5 17 242-258 247-263 (677)
393 4h5i_A Guanine nucleotide-exch 86.3 22 0.00076 33.4 27.2 197 194-448 136-338 (365)
394 3dem_A Complement factor MAsp- 85.8 0.37 1.3E-05 44.4 2.7 40 70-109 120-163 (278)
395 1q4g_A Prostaglandin G/H synth 85.8 0.34 1.2E-05 49.4 2.6 37 30-70 2-40 (553)
396 1kb0_A Quinohemoprotein alcoho 84.2 42 0.0014 34.8 28.9 35 371-407 480-514 (677)
397 3nt1_A Prostaglandin-endoperox 83.0 0.52 1.8E-05 48.2 2.5 36 31-70 2-39 (587)
398 2ovr_B FBW7, F-BOX/WD repeat p 82.9 34 0.0012 32.7 29.0 88 161-256 129-216 (445)
399 3dem_A Complement factor MAsp- 82.7 0.74 2.5E-05 42.3 3.3 40 30-69 121-163 (278)
400 2xzm_R RACK1; ribosome, transl 82.4 30 0.001 31.8 27.3 73 150-227 78-150 (343)
401 1nt0_A MAsp2, mannose-binding 81.7 0.7 2.4E-05 42.7 2.7 39 31-69 121-162 (286)
402 1g1s_A P-selectin; selectin, l 81.4 0.57 2E-05 39.1 1.8 34 78-115 125-160 (162)
403 2oaj_A Protein SNI1; WD40 repe 81.1 64 0.0022 34.7 22.6 151 192-397 18-180 (902)
404 3k6s_B Integrin beta-2; cell r 80.9 0.4 1.4E-05 50.0 0.8 68 26-109 510-591 (687)
405 1hae_A Heregulin-alpha; growth 80.8 0.55 1.9E-05 32.4 1.2 27 83-113 19-51 (63)
406 2oaj_A Protein SNI1; WD40 repe 80.7 66 0.0023 34.6 26.3 101 150-258 19-119 (902)
407 1a3p_A Epidermal growth factor 80.6 0.88 3E-05 28.9 2.1 23 83-109 16-40 (45)
408 1nql_B Epidermal growth factor 80.3 0.63 2.2E-05 30.9 1.4 24 42-69 18-43 (53)
409 1kv9_A Type II quinohemoprotei 78.9 64 0.0022 33.3 27.8 15 370-384 383-397 (668)
410 2pm7_B Protein transport prote 78.5 37 0.0013 30.4 28.1 93 151-248 12-110 (297)
411 3q7m_A Lipoprotein YFGL, BAMB; 78.2 44 0.0015 31.1 28.5 99 315-444 270-370 (376)
412 3dm0_A Maltose-binding peripla 77.3 69 0.0024 32.9 31.5 95 150-249 432-529 (694)
413 1kv9_A Type II quinohemoprotei 77.3 71 0.0024 33.0 28.0 57 372-440 462-518 (668)
414 3a0f_A Xyloglucanase; beta-pro 77.2 68 0.0023 33.8 16.7 62 192-256 21-94 (763)
415 1sqj_A OXG-RCBH, oligoxylogluc 76.9 80 0.0027 33.4 20.7 105 150-257 65-189 (789)
416 4ggc_A P55CDC, cell division c 76.5 41 0.0014 29.9 26.9 232 151-448 70-310 (318)
417 3lrv_A PRE-mRNA-splicing facto 76.2 47 0.0016 30.4 22.8 103 150-256 127-233 (343)
418 4gga_A P55CDC, cell division c 75.4 57 0.0019 31.0 29.5 233 150-448 149-390 (420)
419 3q7m_A Lipoprotein YFGL, BAMB; 75.3 53 0.0018 30.6 29.4 61 160-227 53-124 (376)
420 2xrc_A Human complement factor 75.0 1.1 3.7E-05 45.9 1.9 27 2-29 250-276 (565)
421 1yiq_A Quinohemoprotein alcoho 74.4 85 0.0029 32.5 29.6 56 374-441 481-536 (689)
422 2ad6_A Methanol dehydrogenase 72.4 86 0.0029 31.6 28.0 15 371-385 389-403 (571)
423 3fm0_A Protein CIAO1; WDR39,SG 71.3 63 0.0022 29.7 23.9 152 193-397 18-179 (345)
424 2cn3_A Xyloglucanase, beta-1,4 70.9 1.1E+02 0.0036 32.1 18.2 60 193-256 24-91 (737)
425 3ca7_A Protein spitz; argos, E 70.8 1.3 4.4E-05 29.2 0.9 24 42-69 20-47 (52)
426 1g1t_A E-selectin; EGF, adhesi 67.6 1.1 3.6E-05 37.1 -0.1 18 83-100 132-149 (157)
427 4aqs_A Laminin subunit beta-1; 67.4 2.3 7.7E-05 43.1 2.3 50 49-108 458-523 (525)
428 2pm7_B Protein transport prote 66.2 73 0.0025 28.4 23.4 95 151-248 56-156 (297)
429 3ltf_D Protein spitz; receptor 66.1 1.3 4.4E-05 30.0 0.1 24 42-69 20-47 (58)
430 1flg_A Protein (quinoprotein e 65.1 1.2E+02 0.0042 30.6 23.6 111 316-441 415-547 (582)
431 3lrv_A PRE-mRNA-splicing facto 62.8 91 0.0031 28.4 27.5 154 192-398 126-291 (343)
432 3k6s_B Integrin beta-2; cell r 62.8 2.3 7.9E-05 44.3 1.3 41 52-100 494-547 (687)
433 2hes_X YDR267CP; beta-propelle 61.4 96 0.0033 28.2 27.2 90 163-256 26-126 (330)
434 3ott_A Two-component system se 59.5 1.7E+02 0.0058 30.4 23.8 67 151-225 375-447 (758)
435 3mmy_A MRNA export factor; mRN 58.8 1E+02 0.0035 27.7 26.2 64 191-257 39-106 (368)
436 3asi_A Neurexin-1-alpha; beta- 56.6 6.5 0.00022 38.1 3.3 28 32-59 187-215 (410)
437 1q4g_A Prostaglandin G/H synth 55.1 4 0.00014 41.5 1.5 34 71-109 2-39 (553)
438 1w6s_A Methanol dehydrogenase 55.0 1.8E+02 0.0063 29.4 26.9 55 373-441 480-534 (599)
439 3e50_C Protransforming growth 53.4 9.5 0.00032 24.8 2.6 19 49-71 28-46 (50)
440 4gq1_A NUP37; propeller, trans 50.1 1.6E+02 0.0056 27.4 19.0 98 162-262 102-211 (393)
441 2xbg_A YCF48-like protein; pho 48.4 1.6E+02 0.0055 26.8 22.7 96 151-255 82-179 (327)
442 2ygo_A WIF-1, WNT inhibitory f 48.0 9.1 0.00031 32.6 2.3 15 51-69 165-179 (188)
443 3ssb_I IMPI alpha, inducible m 48.0 8.8 0.0003 22.3 1.6 21 53-74 7-27 (32)
444 1flg_A Protein (quinoprotein e 47.9 2.3E+02 0.0079 28.5 20.7 15 242-256 416-430 (582)
445 3nt1_A Prostaglandin-endoperox 46.6 6.1 0.00021 40.3 1.3 34 72-110 2-39 (587)
446 2hr7_A Insulin receptor; hormo 45.1 10 0.00035 37.7 2.6 59 51-110 235-303 (486)
447 1b9w_A Protein (merozoite surf 44.5 23 0.0008 26.1 3.7 55 43-99 17-78 (95)
448 3cfw_A L-selectin; EGF, cell a 44.0 8 0.00027 31.9 1.4 34 78-115 125-160 (164)
449 2hes_X YDR267CP; beta-propelle 43.8 1.8E+02 0.0063 26.2 25.6 101 150-255 60-171 (330)
450 4gga_A P55CDC, cell division c 43.4 2.1E+02 0.0072 26.8 30.0 67 156-227 111-179 (420)
451 2zux_A YESW protein; beta-prop 42.5 1.7E+02 0.0059 29.5 10.9 110 140-257 280-408 (591)
452 4aqb_A Mannan-binding lectin s 41.9 15 0.00052 34.7 3.2 41 70-110 120-164 (361)
453 2rnl_A Amphiregulin; AR, color 41.8 19 0.00064 23.3 2.6 23 43-69 24-48 (50)
454 1n1i_A Merozoite surface prote 41.7 18 0.0006 27.5 2.8 55 3-59 11-83 (105)
455 3bg1_A Protein SEC13 homolog; 41.1 2E+02 0.0067 25.7 22.0 101 151-255 16-122 (316)
456 3vu4_A KMHSV2; beta-propeller 40.7 2.1E+02 0.0073 26.1 27.7 68 152-227 62-129 (355)
457 1yiq_A Quinohemoprotein alcoho 40.6 3.2E+02 0.011 28.1 23.1 16 242-257 393-408 (689)
458 2p3f_N Anti-coagulant protein 37.0 16 0.00054 26.2 1.9 25 51-75 47-71 (78)
459 1xdt_R Hbegf, heparin-binding 37.0 11 0.00038 27.1 1.0 12 49-60 60-71 (79)
460 2dtg_E Insulin receptor; IR ec 36.9 36 0.0012 36.7 5.5 56 54-110 240-303 (897)
461 1ccv_A AMCI, chymotrypsin inhi 35.7 17 0.0006 23.9 1.8 30 39-74 27-56 (56)
462 3f6k_A Sortilin; protein sorti 34.3 4.1E+02 0.014 27.4 23.0 77 152-233 93-176 (685)
463 3ott_A Two-component system se 30.3 4.7E+02 0.016 26.9 25.2 95 151-256 65-163 (758)
464 1iox_A Betacellulin; EGF-like 30.0 19 0.00066 23.2 1.2 18 48-69 27-44 (50)
465 4gq1_A NUP37; propeller, trans 29.9 3.4E+02 0.012 25.1 18.9 72 151-225 139-217 (393)
466 2ygo_A WIF-1, WNT inhibitory f 29.9 20 0.00068 30.5 1.6 27 79-109 150-179 (188)
467 1ob1_C Major merozoite surface 29.7 37 0.0013 25.5 2.8 56 3-60 5-83 (99)
468 1ata_A Ascaris trypsin inhibit 29.5 57 0.002 22.0 3.6 32 38-74 27-60 (62)
469 1hvw_A Omega-ACTX-HV1A, omega- 29.3 21 0.0007 19.3 1.0 15 5-19 1-15 (26)
470 3qcw_A Neurexin-1-alpha; synap 28.3 36 0.0012 38.2 3.9 36 31-70 620-656 (1245)
471 4aqb_A Mannan-binding lectin s 27.7 36 0.0012 32.1 3.2 33 37-69 131-163 (361)
472 3qcw_A Neurexin-1-alpha; synap 27.4 32 0.0011 38.7 3.2 35 31-69 1018-1053(1245)
473 2xbg_A YCF48-like protein; pho 26.5 3.6E+02 0.012 24.3 24.6 178 160-396 46-231 (327)
474 2zux_A YESW protein; beta-prop 26.3 5.1E+02 0.018 26.1 21.8 96 295-400 269-374 (591)
475 3bg1_A Protein SEC13 homolog; 25.8 3.5E+02 0.012 24.0 22.5 74 151-227 60-137 (316)
476 2j04_B YDR362CP, TAU91; beta p 25.7 4.9E+02 0.017 25.6 19.1 225 160-448 172-423 (524)
477 2fd6_A Urokinase-type plasmino 21.7 59 0.002 25.3 2.9 51 43-110 8-63 (122)
No 1
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=100.00 E-value=3.3e-54 Score=461.78 Aligned_cols=350 Identities=28% Similarity=0.529 Sum_probs=308.0
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCCC-CCCCCcccCCCCCCCCCceeCCCCceEeCCCCCeecCCCCceecCcceecCCcc
Q psy17325 2 ADRCVNLTKVCDGKTDCPNGADEGP-GCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYC 80 (461)
Q Consensus 2 ~~~Ci~~~~~Cd~~~dC~dg~de~~-~C~~~~C~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C 80 (461)
+|+||+..++|++..+|+||+||.. .|+.++|..++..|.+.|.+++++|.|.|++||.+ .++..|++++||..+..|
T Consensus 283 ~G~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~~C~~~~~~C~~~C~~~~~~y~C~C~~Gy~l-~~g~~C~dideC~~~~~C 361 (791)
T 3m0c_C 283 SGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQDPDTC 361 (791)
T ss_dssp TSCCCCSSCCSCSSCCSSSSCSCCCTTBSCCSTTTGGGGCSSEEEECSBSEEEECCTTCEE-ETTTEEECCCCCSSSSSC
T ss_pred CCcccccccccCCccccccccCccccccccccccccccCccccccCCCCCcccCCCCCCcc-CCCCccccCcccCCCCCC
Confidence 5789999999999999999999954 48899999888899999999999999999999988 678999999999877889
Q ss_pred cCceeeccCCccccCCCCeeeeCCCCceeeccccceeEEEeccccceeecccccCcccccceEEEcCccceeeeeeeecC
Q psy17325 81 SQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIG 160 (461)
Q Consensus 81 ~~~C~~~~g~~~C~C~~g~~l~~~~~~C~~~~~~~~~l~~~~~~~I~~~~l~~~~~~~s~~~~~~~g~~~p~~iavd~~~ 160 (461)
++.|.|+.|+|.|.|++||.+..++++|+++++ .++|++++...|+++++++..+ ..+..++..|.+|++|+..
T Consensus 362 ~~~C~n~~gsy~C~C~~Gy~l~~~~~~C~~~~~-~p~Ll~an~~~Ir~i~l~~~~~-----~~l~~~~~~~~gl~~d~~~ 435 (791)
T 3m0c_C 362 SQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGS-IAYLFFTNRHEVRKMTLDRSEY-----TSLIPNLRNVVALDTEVAS 435 (791)
T ss_dssp TTTCCBCSSCBCCCCCSSEECCSSCCCCEETTS-CCEEEEECBSSEEEECTTSCCC-----EEEECSCSSEEEEEEETTT
T ss_pred CCeeecCCCCceeecCCCCEeCCCCceeeeccc-ccccccccccceeEeeccCCcc-----eeeecCCCceEEEeecccC
Confidence 999999999999999999999999999999876 4578899999999998876543 3356788999999999999
Q ss_pred CeEEEEeCCCCeEEEEeCCCC----cEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEecc
Q psy17325 161 GHIYWLDSRLNRIEVCDENGT----NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 236 (461)
Q Consensus 161 ~~ly~~d~~~~~I~~~~~~G~----~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~~ 236 (461)
++|||+|...++|++++++|. ...+++...+..|.|||+|+..+ .|||+| ....+|++++++|+.+++++...
T Consensus 436 ~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~--~LY~tD-~~~~~I~v~~ldG~~~~~l~~~~ 512 (791)
T 3m0c_C 436 NRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS--NIYWTD-SVLGTVSVADTKGVKRKTLFREN 512 (791)
T ss_dssp TEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTT--EEEEEE-TTTTEEEEEETTSSSEEEEEECT
T ss_pred CeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCC--cEEEEe-cCCCeEEEEeCCCCeEEEEEeCC
Confidence 999999999999999999984 44667777888999999999988 999999 55679999999999999999888
Q ss_pred cccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCe--
Q psy17325 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL-- 314 (461)
Q Consensus 237 ~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~-- 314 (461)
+..|.|||||+..++|||+|.... ++|++++++|+.+++++...+
T Consensus 513 l~~P~gIaVDp~~g~LYwtD~g~~---------------------------------~~I~~~~~dG~~~~~lv~~~l~~ 559 (791)
T 3m0c_C 513 GSKPRAIVVDPVHGFMYWTDWGTP---------------------------------AKIKKGGLNGVDIYSLVTENIQW 559 (791)
T ss_dssp TCCEEEEEEETTTTEEEEEECSSS---------------------------------CEEEEEETTSCCEEEEECSSCSC
T ss_pred CCCcceEEEecCCCCEEEecCCCC---------------------------------CeEEEEecCCCceEEEEeCCCCC
Confidence 999999999999999999987542 369999999999999998776
Q ss_pred eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeC--CCCCceeEEEecCCCeEEEEcCCCCeE
Q psy17325 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST--KIYWPNGLTLDIATRRVYFADSKLDFI 392 (461)
Q Consensus 315 p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~--~l~~p~glaiD~~~~~ly~~d~~~~~I 392 (461)
|+|||||+.+++|||+|.. .++|++++++|+.+++++.. .+.+|.||++ .+++|||+|+.+++|
T Consensus 560 P~GLavD~~~~~LYwaD~~------------~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav--~~~~lYwtD~~~~~I 625 (791)
T 3m0c_C 560 PNGITLDLLSGRLYWVDSK------------LHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEAI 625 (791)
T ss_dssp EEEEEEETTTTEEEEEETT------------TTEEEEEETTSCSCEEEEECTTTTSSEEEEEE--ETTEEEEEETTTTEE
T ss_pred ceEEEEecCCCeEEEEeCC------------CCcEEEEecCCCceEEEecCCCccCCCCEEEE--eCCEEEEEECCCCEE
Confidence 9999999999999998887 88999999999999999864 4677888888 678999999999999
Q ss_pred EEEEecCCCCeEEEEEc
Q psy17325 393 DFCNYDGTGRQQVILID 409 (461)
Q Consensus 393 ~~~~~~g~g~~~~~~~~ 409 (461)
.+++.. +|..+.++..
T Consensus 626 ~~~dk~-tG~~~~~l~~ 641 (791)
T 3m0c_C 626 FSANRL-TGSDVNLLAE 641 (791)
T ss_dssp EEEETT-TCCCCEEEEC
T ss_pred EEEeCC-CCcceEEeec
Confidence 999962 6766666543
No 2
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=100.00 E-value=3.7e-52 Score=415.16 Aligned_cols=324 Identities=30% Similarity=0.540 Sum_probs=239.4
Q ss_pred CCCcccCCCCCCCCCceeCCCCceEeCCCCCeecCCCCceecCcceecCCcccCceeeccCCccccCCCCeeeeCCCCce
Q psy17325 29 DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTC 108 (461)
Q Consensus 29 ~~~~C~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~~C~~~~g~~~C~C~~g~~l~~~~~~C 108 (461)
+++||..+++.|.+.|.+..++|.|.|++||.+..++.+|++++||..++.|++.|.|++++|.|.|++||.+..++++|
T Consensus 2 ~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~~C~~~~g~~~C~C~~g~~l~~d~~~C 81 (386)
T 3v65_B 2 GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSC 81 (386)
T ss_dssp --------------------------------------------------CCTTEEC-----CCEECCTTEEECTTSSCE
T ss_pred CcCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCccCccceeCCcCcccCcCCCCCCCCeEEECCCceEcCCCCeE
Confidence 35789888899999999889999999999999988899999999998667899999999999999999999999999999
Q ss_pred eeccccceeEEEeccccceeecccccCcccccceEEEcCccceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEec
Q psy17325 109 KAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK 188 (461)
Q Consensus 109 ~~~~~~~~~l~~~~~~~I~~~~l~~~~~~~s~~~~~~~g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~ 188 (461)
+++++ .+++++++.+.|+++++++... ..+..++..|.++++|+..+.|||+|...++|.+++++|...+.++.
T Consensus 82 ~~~~~-~~~l~~~~~~~I~~i~~~~~~~-----~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~ 155 (386)
T 3v65_B 82 KALGP-EPVLLFANRIDIRQVLPHRSEY-----TLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS 155 (386)
T ss_dssp EECSS-CCEEEEECBSCEEEECTTSCCC-----EEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC
T ss_pred CCccc-cceeEeecCccceeeccCCCcE-----EEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe
Confidence 98876 7789999999999998876543 34567889999999999999999999999999999999998888888
Q ss_pred CCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccc
Q psy17325 189 DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268 (461)
Q Consensus 189 ~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~ 268 (461)
..+..|.|||+|+..+ .|||+|. ...+|++++++|+.+++++...+..|.|||+|+.+++|||+|....
T Consensus 156 ~~~~~p~glavd~~~g--~lY~~d~-~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~-------- 224 (386)
T 3v65_B 156 TGLESPGGLAVDWVHD--KLYWTDS-GTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNT-------- 224 (386)
T ss_dssp SSCSCCCCEEEETTTT--EEEEEET-TTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSS--------
T ss_pred CCCCCccEEEEEeCCC--eEEEEcC-CCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCC--------
Confidence 7888999999999988 9999994 4579999999999999888888899999999999999999987651
Q ss_pred eeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCC
Q psy17325 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGEN 346 (461)
Q Consensus 269 ~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~ 346 (461)
++|++++++|+.+++++...+ |+|||+|+.+++|||+|.. .
T Consensus 225 -------------------------~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~------------~ 267 (386)
T 3v65_B 225 -------------------------PRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAK------------H 267 (386)
T ss_dssp -------------------------CEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETT------------T
T ss_pred -------------------------CEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECC------------C
Confidence 369999999999999887666 9999999999999999888 8
Q ss_pred CceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEc
Q psy17325 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409 (461)
Q Consensus 347 ~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~ 409 (461)
++|++++++|+.+++++...+.+|.||++ .+++|||+|+..++|.+++.. +|....++..
T Consensus 268 ~~I~~~d~dG~~~~~~~~~~~~~P~giav--~~~~ly~td~~~~~V~~~~~~-~G~~~~~i~~ 327 (386)
T 3v65_B 268 HVIERANLDGSHRKAVISQGLPHPFAITV--FEDSLYWTDWHTKSINSANKF-TGKNQEIIRN 327 (386)
T ss_dssp TEEEEECTTSCSCEEEECSSCSSEEEEEE--ETTEEEEEETTTTEEEEEETT-TCCSCEEEEC
T ss_pred CEEEEEeCCCCeeEEEEECCCCCceEEEE--ECCEEEEeeCCCCeEEEEECC-CCcceEEEcc
Confidence 89999999999999888778999999999 578999999999999999941 6776665543
No 3
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=100.00 E-value=2.3e-51 Score=411.05 Aligned_cols=333 Identities=27% Similarity=0.492 Sum_probs=288.7
Q ss_pred CcccCCCCCCCCCceeCCCCceEeCCCCCeecCCCCceecCcceecCCcccCceeeccCCccccCCCCeeeeCCCCceee
Q psy17325 31 AECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110 (461)
Q Consensus 31 ~~C~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~~C~~~~g~~~C~C~~g~~l~~~~~~C~~ 110 (461)
+||..+++.|.+.|.+++++|.|.|++||.+ .++..|++++||..+..|++.|.|+.++|.|.|++||.+..++++|++
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~-~~~~~C~dideC~~~~~C~~~C~n~~g~~~C~C~~g~~~~~~~~~C~~ 79 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKA 79 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTEEE-CSSSCEEECCCCSTTSSCSSCCBCCSSSCBCCCCTTCCCCTTTSSCCC
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCCCc-CCCCcccCchhhhccCCCCCccCCCccceeeeccccccccccccceee
Confidence 4788888899999999999999999999998 678999999999877889999999999999999999999999999988
Q ss_pred ccccceeEEEeccccceeecccccCcccccceEEEcCccceeeeeeeecCCeEEEEeCCCCeEEEEeCCC----CcEEEE
Q psy17325 111 INHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG----TNRIVL 186 (461)
Q Consensus 111 ~~~~~~~l~~~~~~~I~~~~l~~~~~~~s~~~~~~~g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G----~~~~~l 186 (461)
+++ .+++++++++.|+++++++..+ ..+..++..|.+|++|+..+.|||+|...++|.+++++| .....+
T Consensus 80 ~~~-~~~ll~~~~~~I~~i~l~~~~~-----~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~ 153 (400)
T 3p5b_L 80 VGS-IAYLFFTNRHEVRKMTLDRSEY-----TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV 153 (400)
T ss_dssp STT-SCEEEEEETTEEEEECTTSCSC-----EEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEE
T ss_pred ccc-cceeEEeccceeEEEccCCcce-----eEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEE
Confidence 754 6789999999999999876543 235678899999999999999999999999999999998 446677
Q ss_pred ecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecc
Q psy17325 187 AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKS 266 (461)
Q Consensus 187 ~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~ 266 (461)
+...+..|.|||+|+..+ .|||+| ....+|.+++++|..+++++...+..|.+||||+..++|||+|....
T Consensus 154 ~~~~~~~p~glavD~~~~--~lY~~d-~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~------ 224 (400)
T 3p5b_L 154 ISRDIQAPDGLAVDWIHS--NIYWTD-SVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTP------ 224 (400)
T ss_dssp ECSSCSCEEEEEEETTTT--EEEEEE-TTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSS------
T ss_pred EeCCCCCcccEEEEecCC--ceEEEE-CCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCC------
Confidence 777788999999999888 999999 55679999999999999999888999999999999999999986532
Q ss_pred cceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCe--eeeEEEeccCCeEEEeecCceeeEEEeecC
Q psy17325 267 LEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWG 344 (461)
Q Consensus 267 ~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~ 344 (461)
++|++++++|+.+++++...+ |+|||+|+.+++|||+|..
T Consensus 225 ---------------------------~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~----------- 266 (400)
T 3p5b_L 225 ---------------------------AKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK----------- 266 (400)
T ss_dssp ---------------------------CCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETT-----------
T ss_pred ---------------------------CEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECC-----------
Confidence 369999999999999988766 9999999999999999888
Q ss_pred CCCceEEEeecCCCeEEEeeC--CCCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCC
Q psy17325 345 ENPRIERIGMDGSNRSTIIST--KIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN 422 (461)
Q Consensus 345 ~~~~I~~~~~dG~~~~~l~~~--~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~ 422 (461)
..+|++++++|+.+++++.. .+.+|.||++ .+++|||+|+..++|.+++.. +|....++....
T Consensus 267 -~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v--~~~~lywtd~~~~~V~~~~~~-~G~~~~~i~~~~----------- 331 (400)
T 3p5b_L 267 -LHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEAIFSANRL-TGSDVNLLAENL----------- 331 (400)
T ss_dssp -TTEEEEEETTSCCCEEEEECSSTTSSEEEEEE--ETTEEEEEESSSCSEEEEESS-SCCCCEEEECSC-----------
T ss_pred -CCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE--eCCEEEEecCCCCeEEEEEcC-CCCceEEEecCC-----------
Confidence 88999999999999998853 5889999999 578999999999999999942 677665554322
Q ss_pred CcceEEEeeeC
Q psy17325 423 GVPALALDLEN 433 (461)
Q Consensus 423 ~~~~~~l~~~~ 433 (461)
..|.+|+++.
T Consensus 332 -~~p~~i~v~~ 341 (400)
T 3p5b_L 332 -LSPEDMVLFH 341 (400)
T ss_dssp -SCEEEEEEES
T ss_pred -CCCceEEEEe
Confidence 2367777764
No 4
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=100.00 E-value=1e-50 Score=432.95 Aligned_cols=348 Identities=29% Similarity=0.532 Sum_probs=299.9
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCCC-CCCCCcccCCCCCCCCCceeCCCCceEeCCCCCeecCCCCceecCcceecCCcc
Q psy17325 2 ADRCVNLTKVCDGKTDCPNGADEGP-GCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYC 80 (461)
Q Consensus 2 ~~~Ci~~~~~Cd~~~dC~dg~de~~-~C~~~~C~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C 80 (461)
+++||+..++|++..+|++|+||.. .|+++||..++..|.+.|.+++++|.|.|++||.+ .+++.|++++||..++.|
T Consensus 265 ~g~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~-~~~~~C~dideC~~~~~C 343 (699)
T 1n7d_A 265 SGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQDPDTC 343 (699)
T ss_dssp TSCCCCSSCCSCSSCCSSSSCSCCCSSCCCCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCC-CSSSCCCCCCCCSSSSSC
T ss_pred CCcEeCCcccccccceecCcccccccccccccccccccCcCCCcccCCCCcEEeCCCCeEc-CCCCcccCccccCCCCcc
Confidence 5789999999999999999999863 68999999888899999999999999999999988 678999999999877889
Q ss_pred cCceeeccCCccccCCCCeeeeCCCCceeeccccceeEEEeccccceeecccccCcccccceEEEcCccceeeeeeeecC
Q psy17325 81 SQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIG 160 (461)
Q Consensus 81 ~~~C~~~~g~~~C~C~~g~~l~~~~~~C~~~~~~~~~l~~~~~~~I~~~~l~~~~~~~s~~~~~~~g~~~p~~iavd~~~ 160 (461)
++.|.|+.++|.|.|++||.+..++++|+++. ..+++++++.+.|+++++.+..+. .+..++..|.+|++|+..
T Consensus 344 ~~~C~n~~g~y~C~C~~G~~~~~~~~~C~~~~-~~~~ll~~~~~~I~~id~~~~~~~-----~~~~~~~~p~gla~d~~~ 417 (699)
T 1n7d_A 344 SQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG-SIAYLFFTNRHEVRKMTLDRSEYT-----SLIPNLRNVVALDTEVAS 417 (699)
T ss_dssp TTTCCBCSSCBCCCCCSSCBCCSSCCCCBCCS-SCCCBCCCCTTC-CEECTTSCCEE-----CCSCCCTTCCCCEEETTT
T ss_pred ccccccCCCCeeeeeecccccCCCCCcccccc-cceeEEecCccceEEEeCCCCcce-----eeeccCcceEEEcccccc
Confidence 99999999999999999999998999998874 356788899999999887654432 234567889999999999
Q ss_pred CeEEEEeCCCCeEEEEeCCC----CcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEecc
Q psy17325 161 GHIYWLDSRLNRIEVCDENG----TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 236 (461)
Q Consensus 161 ~~ly~~d~~~~~I~~~~~~G----~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~~ 236 (461)
+.|||+|...++|.+++++| .....++...+..|.|||+|+..+ .|||+| ....+|.+++++|..+++++...
T Consensus 418 ~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g--~LY~tD-~~~~~I~v~d~dg~~~~~l~~~~ 494 (699)
T 1n7d_A 418 NRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS--NIYWTD-SVLGTVSVADTKGVKRKTLFREQ 494 (699)
T ss_dssp TEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSS--BCEECC-TTTSCEEEEBSSSCCEEEECCCS
T ss_pred CeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCC--cEEEEe-ccCCeEEEEecCCCceEEEEeCC
Confidence 99999999999999999997 455556656677899999999888 999999 45679999999999988888877
Q ss_pred cccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCe--
Q psy17325 237 IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL-- 314 (461)
Q Consensus 237 ~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~-- 314 (461)
+..|.|||||+..++|||+|.... ++|+++.++|+.+++++...+
T Consensus 495 ~~~P~giavDp~~g~ly~td~~~~---------------------------------~~I~~~~~dG~~~~~l~~~~l~~ 541 (699)
T 1n7d_A 495 GSKPRAIVVDPVHGFMYWTDWGTP---------------------------------AKIKKGGLNGVDIYSLVTENIQW 541 (699)
T ss_dssp SCCCCCEECCSSSSCCEECCCSSS---------------------------------CCEEBCCSSSCCCCEESCSSCSS
T ss_pred CCCcceEEEccCCCcEEEcccCCC---------------------------------CeEEEEeCCCCCeeEEEeCCCCC
Confidence 889999999999999999996541 358999999999888876666
Q ss_pred eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEee--CCCCCceeEEEecCCCeEEEEcCCCCeE
Q psy17325 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIATRRVYFADSKLDFI 392 (461)
Q Consensus 315 p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~--~~l~~p~glaiD~~~~~ly~~d~~~~~I 392 (461)
|+|||+|+.+++|||+|.. .++|++++++|+.+++++. ..+.+|.||++| .++|||+|+..++|
T Consensus 542 PnGlavd~~~~~LY~aD~~------------~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd--~~~lywtd~~~~~V 607 (699)
T 1n7d_A 542 PNGITLDLLSGRLYWVDSK------------LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAI 607 (699)
T ss_dssp CCCEEECTTTCCEEEEETT------------TTEEEEECSSSSCCEEECCCSSSCSSCCCCEEE--TTEEEEECSTTTCE
T ss_pred ccEEEEeccCCEEEEEecC------------CCeEEEEccCCCceEEEEecCCcCCCceEeEEE--CCEEEEEeCCCCeE
Confidence 9999999999999999887 8899999999999998874 357899999996 56999999999999
Q ss_pred EEEEecCCCCeEEEE
Q psy17325 393 DFCNYDGTGRQQVIL 407 (461)
Q Consensus 393 ~~~~~~g~g~~~~~~ 407 (461)
.+++.. +|....++
T Consensus 608 ~~~d~~-~G~~~~~i 621 (699)
T 1n7d_A 608 FSANRL-TGSDVNLL 621 (699)
T ss_dssp EEEETT-TEEEEECC
T ss_pred EEEEcc-CCCceEEe
Confidence 999973 56654444
No 5
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=1.3e-46 Score=395.37 Aligned_cols=287 Identities=41% Similarity=0.812 Sum_probs=248.1
Q ss_pred ceEEEcCccceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEE
Q psy17325 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIE 220 (461)
Q Consensus 141 ~~~~~~g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~ 220 (461)
+.++..++..|+|||+||.+++|||+|...++|.+++++|+.+++++...+..|++||+||..| +||||||+..++|+
T Consensus 76 ~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g--~ly~tD~g~~~~I~ 153 (619)
T 3s94_A 76 QNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSG--FMYWTDWGEVPKIE 153 (619)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTT--EEEEEECSSSCEEE
T ss_pred EEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCC--eEEEeccCCCCEEE
Confidence 4567778899999999999999999999999999999999999999888889999999999999 99999998789999
Q ss_pred EEecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccce--eee--------------------------
Q psy17325 221 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEI--KTN-------------------------- 272 (461)
Q Consensus 221 ~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~--~~~-------------------------- 272 (461)
|++|||+.+++++...+.+|+|||+|+.+++|||+|...++|++++.+. ++.
T Consensus 154 r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~ 233 (619)
T 3s94_A 154 RAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWST 233 (619)
T ss_dssp EEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSSEEEEECTTT
T ss_pred EEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCCC
Confidence 9999999999999888999999999999999999999999888773310 000
Q ss_pred ----------------e---------------------------------------c----c------------------
Q psy17325 273 ----------------V---------------------------------------N----Y------------------ 275 (461)
Q Consensus 273 ----------------v---------------------------------------~----~------------------ 275 (461)
| . +
T Consensus 234 ~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~ 313 (619)
T 3s94_A 234 HSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCK 313 (619)
T ss_dssp CSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBC
T ss_pred CEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccC
Confidence 0 0 0
Q ss_pred -------------------------c-------------ee-----eeEEEEEecCCCCcceeeeEEeCCCCceEEEEeC
Q psy17325 276 -------------------------S-------------TI-----FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG 312 (461)
Q Consensus 276 -------------------------~-------------~~-----~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~ 312 (461)
. .+ .++|||+|... ++|.+++++|+..++++..
T Consensus 314 ~~~~~~Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~----~~I~r~~~~g~~~~~v~~~ 389 (619)
T 3s94_A 314 DGATELLLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEV----RAIRRSFIDGSGSQFVVTA 389 (619)
T ss_dssp SSCSEEEEEEESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTT----TEEEEEETTSCSCEEEECS
T ss_pred CCCceEEEEEcccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCC----CeEEEEEcCCCccEEEEEC
Confidence 0 00 12799999887 5899999999998888877
Q ss_pred Ce--eeeEEEeccCCeEEEeecC--------------------------------ceeeEEEeecCCCCceEEEeecCCC
Q psy17325 313 QL--YEALALDLENGMLYYSTLK--------------------------------CTRWLFWTDWGENPRIERIGMDGSN 358 (461)
Q Consensus 313 ~~--p~~iavd~~~~~lY~t~~~--------------------------------~~~~l~~~d~~~~~~I~~~~~dG~~ 358 (461)
.+ |.|||+|+.+++|||||.. ..++|||+||+..++|+|++|||+.
T Consensus 390 ~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~ 469 (619)
T 3s94_A 390 QIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSD 469 (619)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred CCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCc
Confidence 66 9999999999999999975 1479999999998999999999999
Q ss_pred eEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEE
Q psy17325 359 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYY 438 (461)
Q Consensus 359 ~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYw 438 (461)
+++++...+.+|+|||+|+.+++|||+|++.++|++++++ |..++++... .+ ..|++|++++++|||
T Consensus 470 ~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~d--G~~~~~~~~~--~l---------~~P~glav~~~~ly~ 536 (619)
T 3s94_A 470 RVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTD--GTGRRVLVED--KI---------PHIFGFTLLGDYVYW 536 (619)
T ss_dssp CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESS--SCCCEEEEEC--CC---------CSSCCEEEETTEEEE
T ss_pred cEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecC--CCceEEEecc--CC---------CCcEEEEEECCEEEE
Confidence 9999977899999999999999999999999999999995 5544444331 12 347899999999999
Q ss_pred EeCCCcee
Q psy17325 439 STEGAEFL 446 (461)
Q Consensus 439 td~~~~~i 446 (461)
||+.++.|
T Consensus 537 tD~~~~~I 544 (619)
T 3s94_A 537 TDWQRRSI 544 (619)
T ss_dssp ECTTSSCE
T ss_pred eecCCCeE
Confidence 99999877
No 6
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=2.2e-46 Score=393.99 Aligned_cols=286 Identities=32% Similarity=0.638 Sum_probs=243.8
Q ss_pred ceEEEcCccceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEE
Q psy17325 141 QDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIE 220 (461)
Q Consensus 141 ~~~~~~g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~ 220 (461)
+.++..++..|+|||+||.+++|||+|...++|.+++++|+.+++++...+.+|++||+||..| +||||||+..++|+
T Consensus 72 ~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G--~lY~tD~g~~~~I~ 149 (628)
T 4a0p_A 72 EHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEG--FMYWTEWGGKPKID 149 (628)
T ss_dssp EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTT--EEEEEECSSSCEEE
T ss_pred EEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCC--eEEEeCCCCCCEEE
Confidence 4566778889999999999999999999999999999999999999888889999999999999 99999998789999
Q ss_pred EEecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccce--eee--------------------------
Q psy17325 221 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEI--KTN-------------------------- 272 (461)
Q Consensus 221 ~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~--~~~-------------------------- 272 (461)
|++|||+.+++++. .+.+|+|||+|+.+++|||+|...+.|++++++. ++.
T Consensus 150 r~~~dG~~~~~l~~-~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~~~ly~tD~~~~ 228 (628)
T 4a0p_A 150 RAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQDYIYWTDWSRR 228 (628)
T ss_dssp EEETTSCSCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEETTEEEEEETTTT
T ss_pred EEeCCCCceEEEEC-CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEECCEEEEecCCCC
Confidence 99999999988875 6899999999999999999999998888774210 000
Q ss_pred ---------------e--------------------------------------c-c-----------------------
Q psy17325 273 ---------------V--------------------------------------N-Y----------------------- 275 (461)
Q Consensus 273 ---------------v--------------------------------------~-~----------------------- 275 (461)
| . .
T Consensus 229 ~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q~~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~ 308 (628)
T 4a0p_A 229 SIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPT 308 (628)
T ss_dssp EEEEEETTTCCSCEEEECSCCSCCEEEEECGGGSCCCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECCS
T ss_pred EEEEEECCCCCceEEEecCCCCcceeeeeeecccccceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCcccc
Confidence 0 0 0
Q ss_pred --------c--------------------------ee-----eeEEEEEecCCCCcceeeeEEeCCCCceEEEEeC----
Q psy17325 276 --------S--------------------------TI-----FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG---- 312 (461)
Q Consensus 276 --------~--------------------------~~-----~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~---- 312 (461)
. .+ .+.|||+|... ++|.+++++|+..+.++..
T Consensus 309 ~~Ll~s~~~~i~~i~l~~~~~~~~~l~~~~~~~~~~ld~d~~~~~iy~sD~~~----~~I~r~~~~g~~~~~v~~~~~~~ 384 (628)
T 4a0p_A 309 TFLLFSQKSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQ----NMIRKAQEDGSQGFTVVVSSVPS 384 (628)
T ss_dssp SEEEEEETTEEEEECCCTTCCCCEECCCTTCSCEEEEEEETTTTEEEEEETTT----TEEEEEETTSCSCEEEEC-----
T ss_pred ceeeeeccceEEEEecccccCceEEEEehhcCCceEEEEecCCCeEEEEecCc----ceEEEEEcCCCCceEEEEccccc
Confidence 0 00 12799999987 5899999999987666643
Q ss_pred --Ce--eeeEEEeccCCeEEEeecC--------------------------------ceeeEEEeecCCCC-ceEEEeec
Q psy17325 313 --QL--YEALALDLENGMLYYSTLK--------------------------------CTRWLFWTDWGENP-RIERIGMD 355 (461)
Q Consensus 313 --~~--p~~iavd~~~~~lY~t~~~--------------------------------~~~~l~~~d~~~~~-~I~~~~~d 355 (461)
.+ |.|||+|+.+++|||||.. ..++|||+||+..+ +|+|++||
T Consensus 385 ~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~d 464 (628)
T 4a0p_A 385 QNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALD 464 (628)
T ss_dssp ---CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETT
T ss_pred ccccCCcceEEeeccCCeEEEEcCCCCEEEEEECCCCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCC
Confidence 33 9999999999999999875 15799999999876 99999999
Q ss_pred CCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCE
Q psy17325 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGM 435 (461)
Q Consensus 356 G~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 435 (461)
|+++++++...+.+|+||++|+.+++|||+|++.++|+++++ +|..++++... .+ ..|++|++++++
T Consensus 465 G~~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~--dG~~r~~~~~~--~~---------~~P~glav~~~~ 531 (628)
T 4a0p_A 465 GTEREVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDL--SGANRIVLEDS--NI---------LQPVGLTVFENW 531 (628)
T ss_dssp SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET--TSCSCEEEECS--SC---------SCEEEEEEETTE
T ss_pred CCCcEEEEeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeC--CCCceEEEEcC--CC---------CCcEEEEEECCE
Confidence 999999998899999999999999999999999999999999 56666665531 12 348999999999
Q ss_pred EEEEeCCCcee
Q psy17325 436 LYYSTEGAEFL 446 (461)
Q Consensus 436 lYwtd~~~~~i 446 (461)
|||||+.++.|
T Consensus 532 ly~tD~~~~~i 542 (628)
T 4a0p_A 532 LYWIDKQQQMI 542 (628)
T ss_dssp EEEEETTTTEE
T ss_pred EEEEECCCCeE
Confidence 99999999877
No 7
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=100.00 E-value=6.8e-47 Score=405.20 Aligned_cols=375 Identities=24% Similarity=0.493 Sum_probs=234.6
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCC-C-------------ceeCCCCceE------------eC
Q psy17325 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSN-T-------------CHPTPLGALC------------TC 55 (461)
Q Consensus 2 ~~~Ci~~~~~Cd~~~dC~dg~de~~~C~~~~C~~~~~~C~~-~-------------C~~~~~~~~C------------~C 55 (461)
+++||+.+|+|||..||.|++|| ..|...+|.++.+.|.+ . |....++..| .|
T Consensus 203 ~g~Ci~~~~~CDg~~dC~dgsDE-~~C~~~~C~~~~f~C~~g~Ci~~~~~Cdg~~dC~dgsDE~~C~~~~~C~~~~~~~C 281 (791)
T 3m0c_C 203 SGECIHSSWRCDGGPDCKDKSDE-ENCAVATCRPDEFQCSDGNCIHGSRQCDREYDCKDMSDEVGCVNVTLCEGPNKFKC 281 (791)
T ss_dssp -----------------------------------------------------------------------CCSTTCCCC
T ss_pred CCceeccccccCCCCCCCCCCCC-CCccccccCCCcceecCCceEecceecCChhccccccccCcccccccccCCCcccc
Confidence 57899999999999999999999 56755556555544432 1 3222222222 12
Q ss_pred CCCCee-----cCCCCcee----------cCcceec-CCcccCceeeccCCccccCCCCeeeeCCCCceeeccccceeEE
Q psy17325 56 PPGEIL-----SNDSVTCQ----------DMNECEQ-PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI 119 (461)
Q Consensus 56 ~~G~~l-----~~~~~~C~----------d~~eC~~-~~~C~~~C~~~~g~~~C~C~~g~~l~~~~~~C~~~~~~~~~l~ 119 (461)
..|.-+ ......|. +++||.. ++.|++.|.+++++|.|.|++||.+ .+++.|.++++|...-
T Consensus 282 ~~G~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~~C~~~~~~C~~~C~~~~~~y~C~C~~Gy~l-~~g~~C~dideC~~~~- 359 (791)
T 3m0c_C 282 HSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQDPD- 359 (791)
T ss_dssp TTSCCCCSSCCSCSSCCSSSSCSCCCTTBSCCSTTTGGGGCSSEEEECSBSEEEECCTTCEE-ETTTEEECCCCCSSSS-
T ss_pred CCCcccccccccCCccccccccCccccccccccccccccCccccccCCCCCcccCCCCCCcc-CCCCccccCcccCCCC-
Confidence 233211 11112232 2466753 4579999999999999999999998 5789999999985211
Q ss_pred EeccccceeecccccCcccc-cceEEEcCccceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEE
Q psy17325 120 ISNRHSILVADLEEKGKDHR-AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198 (461)
Q Consensus 120 ~~~~~~I~~~~l~~~~~~~s-~~~~~~~g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia 198 (461)
...+++ .+..+ .+... +..... .-....-.+++. ...|++++. ..|.++++++.....++. .+..|.+|+
T Consensus 360 --~C~~~C-~n~~g-sy~C~C~~Gy~l-~~~~~~C~~~~~-~p~Ll~an~--~~Ir~i~l~~~~~~~l~~-~~~~~~gl~ 430 (791)
T 3m0c_C 360 --TCSQLC-VNLEG-GYKCQCEEGFQL-DPHTKACKAVGS-IAYLFFTNR--HEVRKMTLDRSEYTSLIP-NLRNVVALD 430 (791)
T ss_dssp --SCTTTC-CBCSS-CBCCCCCSSEEC-CSSCCCCEETTS-CCEEEEECB--SSEEEECTTSCCCEEEEC-SCSSEEEEE
T ss_pred --CCCCee-ecCCC-CceeecCCCCEe-CCCCceeeeccc-ccccccccc--cceeEeeccCCcceeeec-CCCceEEEe
Confidence 111121 11111 11110 000000 000111123332 235666654 679999999887766654 568899999
Q ss_pred EcCCCCceEEEEeecCCCCcEEEEecCCC----CcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeec
Q psy17325 199 LDPSPGTRWLFWTDWGENPRIERIGMDGS----NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274 (461)
Q Consensus 199 ~d~~~g~~~ly~td~~~~~~I~~~~~dG~----~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~ 274 (461)
+|+..+ .|||+| ..+.+|++++++|. ..+.++...+..|.||||||.+++|||+|...
T Consensus 431 ~d~~~~--~lY~sD-~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~--------------- 492 (791)
T 3m0c_C 431 TEVASN--RIYWSD-LSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVL--------------- 492 (791)
T ss_dssp EETTTT--EEEEEE-TTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTT---------------
T ss_pred ecccCC--eeEEee-ccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCC---------------
Confidence 999988 999999 45679999999984 45677777899999999999999999999887
Q ss_pred cceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEE
Q psy17325 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352 (461)
Q Consensus 275 ~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~ 352 (461)
++|++++++|+.+++++...+ |++|||||..|+|| |+||+..++|+++
T Consensus 493 -------------------~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LY-----------wtD~g~~~~I~~~ 542 (791)
T 3m0c_C 493 -------------------GTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMY-----------WTDWGTPAKIKKG 542 (791)
T ss_dssp -------------------TEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEE-----------EEECSSSCEEEEE
T ss_pred -------------------CeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEE-----------EecCCCCCeEEEE
Confidence 468999999999999988666 99999999888655 5566666899999
Q ss_pred eecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeee
Q psy17325 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLE 432 (461)
Q Consensus 353 ~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 432 (461)
+|+|+.+++++...+.+|+|||||+.+++|||+|++.++|+++++ +|..+.++......+ +.|++|+++
T Consensus 543 ~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~--dG~~~~~v~~~~~~l---------~~P~glav~ 611 (791)
T 3m0c_C 543 GLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV--NGGNRKTILEDEKRL---------AHPFSLAVF 611 (791)
T ss_dssp ETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET--TSCSCEEEEECTTTT---------SSEEEEEEE
T ss_pred ecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEec--CCCceEEEecCCCcc---------CCCCEEEEe
Confidence 999999999998899999999999999999999999999999999 566555555432222 358999999
Q ss_pred CCEEEEEeCCCceee
Q psy17325 433 NGMLYYSTEGAEFLK 447 (461)
Q Consensus 433 ~~~lYwtd~~~~~i~ 447 (461)
+++|||||++++.|.
T Consensus 612 ~~~lYwtD~~~~~I~ 626 (791)
T 3m0c_C 612 EDKVFWTDIINEAIF 626 (791)
T ss_dssp TTEEEEEETTTTEEE
T ss_pred CCEEEEEECCCCEEE
Confidence 999999999998883
No 8
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=100.00 E-value=2.4e-44 Score=353.90 Aligned_cols=282 Identities=29% Similarity=0.528 Sum_probs=240.7
Q ss_pred CcceecCCcccCceeeccCCccccCCCCeeeeCCCCceeeccccceeEEEeccccceeecccccCcccccceEEEcCccc
Q psy17325 71 MNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDL 150 (461)
Q Consensus 71 ~~eC~~~~~C~~~C~~~~g~~~C~C~~g~~l~~~~~~C~~~~~~~~~l~~~~~~~I~~~~l~~~~~~~s~~~~~~~g~~~ 150 (461)
++||..++.|+|.|.|++|+|+|.|++||.|..++++|++.++ .++|++++.+.|+++++++... ..+..++..
T Consensus 1 i~ec~~~~~C~~~C~n~~g~~~C~C~~g~~l~~d~~~C~~~~~-~~~ll~~~~~~I~~i~~~g~~~-----~~~~~~~~~ 74 (349)
T 3v64_C 1 VNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALGP-EPVLLFANRIDIRQVLPHRSEY-----TLLLNNLEN 74 (349)
T ss_dssp --------CCSSEECCC---CCEECCTTEEECTTSSCEEESSS-CCEEEEECBSCEEEECTTSCCE-----EEEECSCSC
T ss_pred CcccCCCCCCcCeeecCCCCeEEECCCCccCCCCCCccccccc-CceeEeecccceEEEeCCCCee-----EEeecCCCc
Confidence 4788867789999999999999999999999999999998776 7889999999999998876543 345678889
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcE
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS 230 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~ 230 (461)
|.++++|+..+.|||+|...++|.+++++|...+.++...+..|.|||+|+..+ .|||+| ....+|++++++|+.++
T Consensus 75 ~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g--~ly~~d-~~~~~I~~~~~dG~~~~ 151 (349)
T 3v64_C 75 AIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHD--KLYWTD-SGTSRIEVANLDGAHRK 151 (349)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT--EEEEEE-TTTTEEEEEETTSCSCE
T ss_pred eEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCC--eEEEEc-CCCCeEEEEcCCCCceE
Confidence 999999999999999999999999999999988888877788999999999988 999999 45579999999999998
Q ss_pred EEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEE
Q psy17325 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310 (461)
Q Consensus 231 ~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~ 310 (461)
+++...+..|++||+|+.++.|||+|.... ++|++++++|+.+++++
T Consensus 152 ~l~~~~l~~P~~iavdp~~g~ly~td~~~~---------------------------------~~I~r~~~dG~~~~~~~ 198 (349)
T 3v64_C 152 VLLWQSLEKPRAIALHPMEGTIYWTDWGNT---------------------------------PRIEASSMDGSGRRIIA 198 (349)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEECSSS---------------------------------CEEEEEETTSCSCEESC
T ss_pred EEEeCCCCCcceEEEecCcCeEEEeccCCC---------------------------------CEEEEEeCCCCCcEEEE
Confidence 888888899999999999999999997651 36899999999999888
Q ss_pred eCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCC
Q psy17325 311 SGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 388 (461)
Q Consensus 311 ~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~ 388 (461)
...+ |+||++|+.+++|||+|.. .++|++++++|+.+++++...+.+|.||++ .+++|||+|+.
T Consensus 199 ~~~~~~PnGla~d~~~~~lY~aD~~------------~~~I~~~~~dG~~~~~~~~~~~~~P~giav--~~~~ly~td~~ 264 (349)
T 3v64_C 199 DTHLFWPNGLTIDYAGRRMYWVDAK------------HHVIERANLDGSHRKAVISQGLPHPFAITV--FEDSLYWTDWH 264 (349)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETT------------TTEEEEEETTSCSCEEEECSSCSSEEEEEE--ETTEEEEEETT
T ss_pred ECCCCCcceEEEeCCCCEEEEEECC------------CCEEEEEeCCCCceEEEEeCCCCCceEEEE--ECCEEEEecCC
Confidence 7666 9999999999999998887 889999999999999888778999999999 57899999999
Q ss_pred CCeEEEEEecCCCCeEEEEEc
Q psy17325 389 LDFIDFCNYDGTGRQQVILID 409 (461)
Q Consensus 389 ~~~I~~~~~~g~g~~~~~~~~ 409 (461)
.++|.+++.. +|....++..
T Consensus 265 ~~~V~~~~~~-~G~~~~~i~~ 284 (349)
T 3v64_C 265 TKSINSANKF-TGKNQEIIRN 284 (349)
T ss_dssp TTEEEEEETT-TCCSCEEEEC
T ss_pred CCeEEEEEcc-CCCccEEecc
Confidence 9999999941 6766555543
No 9
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=100.00 E-value=6.6e-44 Score=380.40 Aligned_cols=372 Identities=24% Similarity=0.479 Sum_probs=262.1
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCC-CceeC-------------CC--------------CceE
Q psy17325 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCSN-TCHPT-------------PL--------------GALC 53 (461)
Q Consensus 2 ~~~Ci~~~~~Cd~~~dC~dg~de~~~C~~~~C~~~~~~C~~-~C~~~-------------~~--------------~~~C 53 (461)
+++||+.+|+|||..||.||+|| ..|...+|...++.|.+ .|++. .. .+.|
T Consensus 185 ~g~Ci~~~~~CDg~~dC~dgsDE-~~C~~~~C~~~~f~C~~g~Ci~~~~~Cdg~~dC~dgsde~~C~~~~~C~~~~~~~C 263 (699)
T 1n7d_A 185 SGECIHSSWRCDGGPDCKDKSDE-ENCAVATCRPDEFQCSDGNCIHGSRQCDREYDCKDMSDEVGCVNVTLCEGPNKFKC 263 (699)
T ss_dssp SSCCCSTTCTTSSSCCSTTSCSS-CSCCCCCCCSSEEESSSSCEEETTCCSSSCCCSSSSCSSSSTTCCCCCCSTTCCCC
T ss_pred CCceEechhccCCCCCCCCCccc-ccCCCcccCCCcEecCCCceeeeecccCCCCCCCCCCccCCCCCCCcccCCCceec
Confidence 57899999999999999999999 57866667665555532 23221 11 1111
Q ss_pred ---eCCCCCeecCCCCcee----------cCcceec-CCcccCceeeccCCccccCCCCeeeeCCCCceeeccccceeEE
Q psy17325 54 ---TCPPGEILSNDSVTCQ----------DMNECEQ-PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLI 119 (461)
Q Consensus 54 ---~C~~G~~l~~~~~~C~----------d~~eC~~-~~~C~~~C~~~~g~~~C~C~~g~~l~~~~~~C~~~~~~~~~l~ 119 (461)
.|.+..........|. +++||.. ++.|++.|.+++++|.|.|++||.+ .+++.|.++++|.....
T Consensus 264 ~~g~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~-~~~~~C~dideC~~~~~ 342 (699)
T 1n7d_A 264 HSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQDPDT 342 (699)
T ss_dssp TTSCCCCSSCCSCSSCCSSSSCSCCCSSCCCCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCC-CSSSCCCCCCCCSSSSS
T ss_pred CCCcEeCCcccccccceecCcccccccccccccccccccCcCCCcccCCCCcEEeCCCCeEc-CCCCcccCccccCCCCc
Confidence 1111111111122232 4677863 4579999999999999999999998 57889999998862110
Q ss_pred EeccccceeecccccCcccccceEEEcCcc----ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCce
Q psy17325 120 ISNRHSILVADLEEKGKDHRAQDIVVSGLD----LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPR 195 (461)
Q Consensus 120 ~~~~~~I~~~~l~~~~~~~s~~~~~~~g~~----~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~ 195 (461)
..+++. +..+ ++..+ ...|+. ...-.+++ ....|++++ .+.|.++++++.....++. .+..|.
T Consensus 343 ---C~~~C~-n~~g-~y~C~----C~~G~~~~~~~~~C~~~~-~~~~ll~~~--~~~I~~id~~~~~~~~~~~-~~~~p~ 409 (699)
T 1n7d_A 343 ---CSQLCV-NLEG-GYKCQ----CEEGFQLDPHTKACKAVG-SIAYLFFTN--RHEVRKMTLDRSEYTSLIP-NLRNVV 409 (699)
T ss_dssp ---CTTTCC-BCSS-CBCCC----CCSSCBCCSSCCCCBCCS-SCCCBCCCC--TTC-CEECTTSCCEECCSC-CCTTCC
T ss_pred ---cccccc-cCCC-Ceeee----eecccccCCCCCcccccc-cceeEEecC--ccceEEEeCCCCcceeeec-cCcceE
Confidence 111211 1111 11100 001110 00011121 123455544 3689999999887665554 457899
Q ss_pred eEEEcCCCCceEEEEeecCCCCcEEEEecCC----CCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceee
Q psy17325 196 GMMLDPSPGTRWLFWTDWGENPRIERIGMDG----SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271 (461)
Q Consensus 196 ~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG----~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~ 271 (461)
+|++|+..+ .|||+| ....+|++++++| +....++...+..|.|||||+.+++|||+|...
T Consensus 410 gla~d~~~~--~Ly~sD-~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~------------ 474 (699)
T 1n7d_A 410 ALDTEVASN--RIYWSD-LSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVL------------ 474 (699)
T ss_dssp CCEEETTTT--EEEECC-TTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTT------------
T ss_pred EEccccccC--eEEEEe-cCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccC------------
Confidence 999999988 999999 4567999999998 555556666678899999999999999999876
Q ss_pred eeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCce
Q psy17325 272 NVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349 (461)
Q Consensus 272 ~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I 349 (461)
++|.+++++|..+++++...+ |++|||||.+++|||| ||+..++|
T Consensus 475 ----------------------~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~t-----------d~~~~~~I 521 (699)
T 1n7d_A 475 ----------------------GTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWT-----------DWGTPAKI 521 (699)
T ss_dssp ----------------------SCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEEC-----------CCSSSCCE
T ss_pred ----------------------CeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEc-----------ccCCCCeE
Confidence 458899999999888887655 9999999988866655 55555899
Q ss_pred EEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEE
Q psy17325 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALAL 429 (461)
Q Consensus 350 ~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l 429 (461)
++++|+|+.+++++...+.+|+|||||+.+++|||+|+..++|+++++ +|..++++......+ ..|++|
T Consensus 522 ~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~--dG~~~~~~~~~~~~~---------~~P~gl 590 (699)
T 1n7d_A 522 KKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV--NGGNRKTILEDEKRL---------AHPFSL 590 (699)
T ss_dssp EBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECS--SSSCCEEECCCSSSC---------SSCCCC
T ss_pred EEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEcc--CCCceEEEEecCCcC---------CCceEe
Confidence 999999999999987889999999999999999999999999999999 566555554422222 347899
Q ss_pred eeeCCEEEEEeCCCceee
Q psy17325 430 DLENGMLYYSTEGAEFLK 447 (461)
Q Consensus 430 ~~~~~~lYwtd~~~~~i~ 447 (461)
++++++|||||+++++|.
T Consensus 591 avd~~~lywtd~~~~~V~ 608 (699)
T 1n7d_A 591 AVFEDKVFWTDIINEAIF 608 (699)
T ss_dssp EEETTEEEEECSTTTCEE
T ss_pred EEECCEEEEEeCCCCeEE
Confidence 999999999999998873
No 10
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=100.00 E-value=5.5e-41 Score=335.83 Aligned_cols=303 Identities=24% Similarity=0.466 Sum_probs=231.5
Q ss_pred ccee-cCCcccCceeeccCCccccCCCCeeeeCCCCceeeccccceeEEEeccccceeecccccCcccccceEEEcCcc-
Q psy17325 72 NECE-QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLD- 149 (461)
Q Consensus 72 ~eC~-~~~~C~~~C~~~~g~~~C~C~~g~~l~~~~~~C~~~~~~~~~l~~~~~~~I~~~~l~~~~~~~s~~~~~~~g~~- 149 (461)
+||. .+..|++.|.+++++|.|.|++||.+ .+++.|.++++|...- ...+.+. +..+ .+... ...|+.
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~-~~~~~C~dideC~~~~---~C~~~C~-n~~g-~~~C~----C~~g~~~ 70 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQDPD---TCSQLCV-NLEG-GYKCQ----CEEGFQL 70 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTEEE-CSSSCEEECCCCSTTS---SCSSCCB-CCSS-SCBCC----CCTTCCC
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCCCc-CCCCcccCchhhhccC---CCCCccC-CCcc-ceeee----ccccccc
Confidence 4676 34578999999999999999999998 5788999999986211 1111111 1111 11110 001110
Q ss_pred ---ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCC
Q psy17325 150 ---LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226 (461)
Q Consensus 150 ---~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG 226 (461)
.-.-.+++ ....|++++. +.|.++++++...+.++. .+.+|.+|++|+..+ .|||+| ..+.+|++++++|
T Consensus 71 ~~~~~~C~~~~-~~~~ll~~~~--~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~--~lywsD-~~~~~I~~~~~~g 143 (400)
T 3p5b_L 71 DPHTKACKAVG-SIAYLFFTNR--HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASN--RIYWSD-LSQRMICSTQLDR 143 (400)
T ss_dssp CTTTSSCCCST-TSCEEEEEET--TEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTT--EEEEEE-TTTTEEEEEEC--
T ss_pred cccccceeecc-ccceeEEecc--ceeEEEccCCcceeEecc-ccCcceEEeeeeccC--ceEEEe-cCCCeEEEEEccc
Confidence 00011121 2345666665 799999999988777664 568899999999988 999999 4567999999998
Q ss_pred ----CCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCC
Q psy17325 227 ----SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMD 302 (461)
Q Consensus 227 ----~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~ 302 (461)
+..+.++...+..|.|||||+.+++|||+|... ++|.+++++
T Consensus 144 ~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~----------------------------------~~I~~~~~~ 189 (400)
T 3p5b_L 144 AHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVL----------------------------------GTVSVADTK 189 (400)
T ss_dssp ----CCCEEEECSSCSCEEEEEEETTTTEEEEEETTT----------------------------------TEEEEECTT
T ss_pred CCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCC----------------------------------CeEEEEeCC
Confidence 456777777889999999999999999999887 468899999
Q ss_pred CCceEEEEeCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCC
Q psy17325 303 GSNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380 (461)
Q Consensus 303 g~~~~~l~~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~ 380 (461)
|+.+++++...+ |++|||||.+|+|| |+||+.+++|++++|||+.+++++...+.+|+|||+|+.++
T Consensus 190 g~~~~~l~~~~~~~P~~iavdp~~g~ly-----------~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~ 258 (400)
T 3p5b_L 190 GVKRKTLFRENGSKPRAIVVDPVHGFMY-----------WTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSG 258 (400)
T ss_dssp TCSEEEEEECSSCCEEEEEEETTTTEEE-----------EEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTT
T ss_pred CCceEEEEeCCCCCcceEEEecccCeEE-----------EEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCC
Confidence 999999988666 99999999888555 55677678999999999999999988899999999999999
Q ss_pred eEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeCCCceee
Q psy17325 381 RVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447 (461)
Q Consensus 381 ~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~~~~~i~ 447 (461)
+|||+|+..++|+++++ +|..+.++......+ ..|++|+++++.|||||++++.|.
T Consensus 259 ~lY~aD~~~~~I~~~d~--dG~~~~~~~~~~~~l---------~~P~gl~v~~~~lywtd~~~~~V~ 314 (400)
T 3p5b_L 259 RLYWVDSKLHSISSIDV--NGGNRKTILEDEKRL---------AHPFSLAVFEDKVFWTDIINEAIF 314 (400)
T ss_dssp EEEEEETTTTEEEEEET--TSCCCEEEEECSSTT---------SSEEEEEEETTEEEEEESSSCSEE
T ss_pred EEEEEECCCCEEEEEeC--CCCccEEEEeCCCCC---------CCCEEEEEeCCEEEEecCCCCeEE
Confidence 99999999999999999 566555554432222 358999999999999999998773
No 11
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=100.00 E-value=1.9e-40 Score=330.65 Aligned_cols=304 Identities=29% Similarity=0.503 Sum_probs=194.3
Q ss_pred cCccee-cCCcccCceeeccCCccccCCCCeeeeCCCCceeeccccceeEEEeccccceeecccccCcccccceEEEcCc
Q psy17325 70 DMNECE-QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGL 148 (461)
Q Consensus 70 d~~eC~-~~~~C~~~C~~~~g~~~C~C~~g~~l~~~~~~C~~~~~~~~~l~~~~~~~I~~~~l~~~~~~~s~~~~~~~g~ 148 (461)
+++||. .+..|++.|.+..++|.|.|++||.|..+++.|.++++|...- ...+.+ .+..+ .+.. ....|+
T Consensus 2 ~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~~~---~C~~~C-~~~~g-~~~C----~C~~g~ 72 (386)
T 3v65_B 2 GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEG---YCSQGC-TNSEG-AFQC----WCEAGY 72 (386)
T ss_dssp -----------------------------------------------------CCTTEE-C------CCE----ECCTTE
T ss_pred CcCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCccCccceeCCcC---cccCcC-CCCCC-CCeE----EECCCc
Confidence 678997 4568999999999999999999999998999999999885211 111111 11111 1110 001111
Q ss_pred c----ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEec
Q psy17325 149 D----LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGM 224 (461)
Q Consensus 149 ~----~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~ 224 (461)
. ...-.+.+. ...|++++. +.|.+++++|...+.++. .+..|.+|++|+..+ .|||+| ....+|+|+++
T Consensus 73 ~l~~d~~~C~~~~~-~~~l~~~~~--~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~--~ly~~D-~~~~~I~r~~~ 145 (386)
T 3v65_B 73 ELRPDRRSCKALGP-EPVLLFANR--IDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRE--LVFWSD-VTLDRILRANL 145 (386)
T ss_dssp EECTTSSCEEECSS-CCEEEEECB--SCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTT--EEEEEE-TTTTEEEEEET
T ss_pred eEcCCCCeECCccc-cceeEeecC--ccceeeccCCCcEEEEec-CCCccEEEEEecCCC--eEEEEe-CCCCcEEEEec
Confidence 1 111123332 456677655 689999999987766664 567899999999988 999999 45679999999
Q ss_pred CCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCC
Q psy17325 225 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304 (461)
Q Consensus 225 dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~ 304 (461)
+|+..+.++..++..|.|||+|+.+++|||+|... ++|.+++++|+
T Consensus 146 ~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~----------------------------------~~I~~~~~dg~ 191 (386)
T 3v65_B 146 NGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGT----------------------------------SRIEVANLDGA 191 (386)
T ss_dssp TSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTT----------------------------------TEEEECBTTSC
T ss_pred CCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCC----------------------------------CeEEEEeCCCC
Confidence 99988888888888999999999999999999877 45889999999
Q ss_pred ceEEEEeCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeE
Q psy17325 305 NASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382 (461)
Q Consensus 305 ~~~~l~~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~l 382 (461)
.+++++...+ |++|++||.++.|||+ ||+..++|+|+++||+.+++++...+.+|+|||+|+.+++|
T Consensus 192 ~~~~l~~~~l~~P~giavdp~~g~ly~t-----------d~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~l 260 (386)
T 3v65_B 192 HRKVLLWQSLEKPRAIALHPMEGTIYWT-----------DWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRM 260 (386)
T ss_dssp SCEEEECSSCSCEEEEEEETTTTEEEEE-----------ECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEE
T ss_pred ceEEeecCCCCCCcEEEEEcCCCeEEEe-----------ccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEE
Confidence 9988887766 9999999998876665 45545899999999999999988889999999999999999
Q ss_pred EEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeCCCceee
Q psy17325 383 YFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447 (461)
Q Consensus 383 y~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~~~~~i~ 447 (461)
||+|+..++|++++++ |..+.++.... + ..|.+|+++++.|||||++++.|+
T Consensus 261 Y~aD~~~~~I~~~d~d--G~~~~~~~~~~--~---------~~P~giav~~~~ly~td~~~~~V~ 312 (386)
T 3v65_B 261 YWVDAKHHVIERANLD--GSHRKAVISQG--L---------PHPFAITVFEDSLYWTDWHTKSIN 312 (386)
T ss_dssp EEEETTTTEEEEECTT--SCSCEEEECSS--C---------SSEEEEEEETTEEEEEETTTTEEE
T ss_pred EEEECCCCEEEEEeCC--CCeeEEEEECC--C---------CCceEEEEECCEEEEeeCCCCeEE
Confidence 9999999999999994 55444443321 1 348899999999999999998873
No 12
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=9.6e-40 Score=343.20 Aligned_cols=284 Identities=27% Similarity=0.481 Sum_probs=247.5
Q ss_pred cCccee-cCCcccCceeecc--CCccccCCCCeeeeCCCCceeeccccceeEEEeccccceeecccccCcccccceEEEc
Q psy17325 70 DMNECE-QPGYCSQMCTNTK--GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVS 146 (461)
Q Consensus 70 d~~eC~-~~~~C~~~C~~~~--g~~~C~C~~g~~l~~~~~~C~~~~~~~~~l~~~~~~~I~~~~l~~~~~~~s~~~~~~~ 146 (461)
..++|. .++.|+|.|...+ ++|.|.|+.||.|..++++|.+. ..++|+++.+..|++++++...+.. ..+...
T Consensus 271 ~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~--~~~~Ll~~~~~~i~~i~l~~~~~~~--~~~~~~ 346 (619)
T 3s94_A 271 ATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDG--ATELLLLARRTDLRRISLDTPDFTD--IVLQLE 346 (619)
T ss_dssp CCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSS--CSEEEEEEESSCEEEEESSSTTCCC--EECCCS
T ss_pred ccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCC--CceEEEEEcccceEEEecCCCccce--eEEecc
Confidence 357886 4678999999887 47999999999999999999763 3689999999999999887654321 122346
Q ss_pred CccceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCC
Q psy17325 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226 (461)
Q Consensus 147 g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG 226 (461)
++..|.+|++|+.+++|||+|...++|.+++++|+..++++...+..|.|||+|+..+ .|||+| ....+|++++++|
T Consensus 347 ~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~--~lY~tD-~~~~~I~v~~~~G 423 (619)
T 3s94_A 347 DIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVAR--NLYWTD-TGTDRIEVTRLNG 423 (619)
T ss_dssp CCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT--EEEEEE-TTTTEEEEEETTS
T ss_pred ccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccC--cEEEEe-CCCCcEEEEeCCC
Confidence 7889999999999999999999999999999999988888888888999999999988 999999 5678999999999
Q ss_pred CCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCce
Q psy17325 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306 (461)
Q Consensus 227 ~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~ 306 (461)
+.+++++...+..|.+||+|+..+.|||+|.... .+|+++.+||+.+
T Consensus 424 ~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~---------------------------------~~I~r~~~dG~~~ 470 (619)
T 3s94_A 424 TMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEI---------------------------------PKIERAALDGSDR 470 (619)
T ss_dssp CSCEEEECTTCCSEEEEEEETTTTEEEEEECSSS---------------------------------CEEEEEETTSCSC
T ss_pred CeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCC---------------------------------CEEEEEccCCCcc
Confidence 9999998888999999999999999999987542 4699999999999
Q ss_pred EEEEeCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEE
Q psy17325 307 SILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384 (461)
Q Consensus 307 ~~l~~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~ 384 (461)
++++...+ |+|||+|+.+++|||+|.. .++|++++++|+.+++++...+.+|.|||+ .+++|||
T Consensus 471 ~~l~~~~l~~P~GlalD~~~~~LY~aD~~------------~~~I~~~~~dG~~~~~~~~~~l~~P~glav--~~~~ly~ 536 (619)
T 3s94_A 471 VVLVNTSLGWPNGLALDYDEGKIYWGDAK------------TDKIEVMNTDGTGRRVLVEDKIPHIFGFTL--LGDYVYW 536 (619)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETT------------TTEEEEEESSSCCCEEEEECCCCSSCCEEE--ETTEEEE
T ss_pred EEEEeCCCCCCeeeEEcccCCEEEEEECC------------CCEEEEEecCCCceEEEeccCCCCcEEEEE--ECCEEEE
Confidence 99887666 9999999999999999988 889999999999999998788999999999 4679999
Q ss_pred EcCCCCeEEEEEecCCCCeEEEEEc
Q psy17325 385 ADSKLDFIDFCNYDGTGRQQVILID 409 (461)
Q Consensus 385 ~d~~~~~I~~~~~~g~g~~~~~~~~ 409 (461)
+|+..++|.+++.. +| .+.++..
T Consensus 537 tD~~~~~I~~~~k~-~g-~~~~~~~ 559 (619)
T 3s94_A 537 TDWQRRSIERVHKR-SA-EREVIID 559 (619)
T ss_dssp ECTTSSCEEEEESS-SC-CEEEEEC
T ss_pred eecCCCeEEEEEcC-CC-ceEEEec
Confidence 99999999999994 56 4455554
No 13
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=5.5e-40 Score=345.36 Aligned_cols=286 Identities=26% Similarity=0.470 Sum_probs=246.5
Q ss_pred cCccee-cCCcccCceeecc-CCccccCCCCeeeeCCCCceeeccccceeEEEeccccceeecccccCcccccceEEEcC
Q psy17325 70 DMNECE-QPGYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINHSAAFLIISNRHSILVADLEEKGKDHRAQDIVVSG 147 (461)
Q Consensus 70 d~~eC~-~~~~C~~~C~~~~-g~~~C~C~~g~~l~~~~~~C~~~~~~~~~l~~~~~~~I~~~~l~~~~~~~s~~~~~~~g 147 (461)
.+++|. .++.|+|.|.+.+ ++|.|.|++||.|..++++|.+. ..+|+++.+..|+++.++..... ...+...+
T Consensus 264 ~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~---~~~Ll~s~~~~i~~i~l~~~~~~--~~~l~~~~ 338 (628)
T 4a0p_A 264 GWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAP---TTFLLFSQKSAINRMVIDEQQSP--DIILPIHS 338 (628)
T ss_dssp CCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECC---SSEEEEEETTEEEEECCCTTCCC--CEECCCTT
T ss_pred cceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccc---cceeeeeccceEEEEecccccCc--eEEEEehh
Confidence 468997 4678999999999 99999999999999999999763 56899999999998877643321 11223567
Q ss_pred ccceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecC------CCCCceeEEEcCCCCceEEEEeecCCCCcEEE
Q psy17325 148 LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD------NITQPRGMMLDPSPGTRWLFWTDWGENPRIER 221 (461)
Q Consensus 148 ~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~------~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~ 221 (461)
+..+.+|++|..++.|||+|...++|.+++++|+....++.. .+..|.|||+|+..+ .|||+| ....+|++
T Consensus 339 ~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~--nLY~td-~~~~~I~v 415 (628)
T 4a0p_A 339 LRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSR--YIYWTC-EATNVINV 415 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTT--EEEEEE-TTTTEEEE
T ss_pred cCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCC--eEEEEc-CCCCEEEE
Confidence 889999999999999999999999999999999887666554 567899999999988 999999 56689999
Q ss_pred EecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeC
Q psy17325 222 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301 (461)
Q Consensus 222 ~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~ 301 (461)
++++|+.+.+++...+..|.+||||+..+.|||+|..... .+|+++++
T Consensus 416 ~~~~G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~--------------------------------~~I~r~~~ 463 (628)
T 4a0p_A 416 TRLDGRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERS--------------------------------PKIERAAL 463 (628)
T ss_dssp EETTSCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTE--------------------------------EEEEEEET
T ss_pred EECCCCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCC--------------------------------CeEEEEeC
Confidence 9999998888888889999999999999999998875531 26999999
Q ss_pred CCCceEEEEeCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCC
Q psy17325 302 DGSNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379 (461)
Q Consensus 302 ~g~~~~~l~~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~ 379 (461)
||+.+++++...+ |+||++|+.+++|||+|.. ..+|+++++||+.++++....+.+|.|||++ +
T Consensus 464 dG~~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~------------~~~I~~~~~dG~~r~~~~~~~~~~P~glav~--~ 529 (628)
T 4a0p_A 464 DGTEREVLFFSGLSKPIALALDSRLGKLFWADSD------------LRRIESSDLSGANRIVLEDSNILQPVGLTVF--E 529 (628)
T ss_dssp TSCSCEEEECSSCSCEEEEEEETTTTEEEEEETT------------TTEEEEEETTSCSCEEEECSSCSCEEEEEEE--T
T ss_pred CCCCcEEEEeccCCCccEEEEeCCCCEEEEEeCC------------CCEEEEEeCCCCceEEEEcCCCCCcEEEEEE--C
Confidence 9999999998777 9999999999999999988 8899999999999999987789999999995 6
Q ss_pred CeEEEEcCCCCeEEEEEecCCCCeEEEEEcc
Q psy17325 380 RRVYFADSKLDFIDFCNYDGTGRQQVILIDL 410 (461)
Q Consensus 380 ~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~ 410 (461)
++|||+|+..++|++++.. +|..+.++...
T Consensus 530 ~~ly~tD~~~~~i~~~~k~-~G~~~~~i~~~ 559 (628)
T 4a0p_A 530 NWLYWIDKQQQMIEKIDMT-GREGRTKVQAR 559 (628)
T ss_dssp TEEEEEETTTTEEEEEETT-SSSCCEEEECC
T ss_pred CEEEEEECCCCeEEEEECc-CCCCcEEEecc
Confidence 9999999999999999993 57776666653
No 14
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=100.00 E-value=1.7e-36 Score=297.91 Aligned_cols=291 Identities=32% Similarity=0.584 Sum_probs=215.7
Q ss_pred CCcccCCCCCCCCCceeCCCCceEeCCCCCeecCCCCceecCcceecCCcc---cCce-eeccCCccccCCCCee-eeCC
Q psy17325 30 LAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYC---SQMC-TNTKGSYICSCNEGYV-LEYD 104 (461)
Q Consensus 30 ~~~C~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C---~~~C-~~~~g~~~C~C~~g~~-l~~~ 104 (461)
++||. .+..|++.|.+++++|.|.|++||.+..++++|...++ ...-.. ...- ....+. .+. +...
T Consensus 1 i~ec~-~~~~C~~~C~n~~g~~~C~C~~g~~l~~d~~~C~~~~~-~~~ll~~~~~~I~~i~~~g~-------~~~~~~~~ 71 (349)
T 3v64_C 1 VNECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALGP-EPVLLFANRIDIRQVLPHRS-------EYTLLLNN 71 (349)
T ss_dssp ---------CCSSEECCC---CCEECCTTEEECTTSSCEEESSS-CCEEEEECBSCEEEECTTSC-------CEEEEECS
T ss_pred CcccC-CCCCCcCeeecCCCCeEEECCCCccCCCCCCccccccc-CceeEeecccceEEEeCCCC-------eeEEeecC
Confidence 36887 67889999999999999999999999999999986654 110001 1111 011110 011 1111
Q ss_pred CCcee--eccccceeEEEec--cccceeecccccCcccccceEEEcCccceeeeeeeecCCeEEEEeCCCCeEEEEeCCC
Q psy17325 105 NHTCK--AINHSAAFLIISN--RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG 180 (461)
Q Consensus 105 ~~~C~--~~~~~~~~l~~~~--~~~I~~~~l~~~~~~~s~~~~~~~g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G 180 (461)
..... +.+.....+++++ ...|.++++++.. .+.++..++..|.|||+||.+++|||+|...++|.+++++|
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~----~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG 147 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSN----VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDG 147 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS----CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCC----ceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCC
Confidence 11111 2222333455443 4556777665543 24456778899999999999999999999999999999999
Q ss_pred CcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCc
Q psy17325 181 TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 260 (461)
Q Consensus 181 ~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~ 260 (461)
+.+++++...+..|++||+||..| .|||+|++..++|+|++++|+.+++++...+.+|+|||+|+.+++|||+|...
T Consensus 148 ~~~~~l~~~~l~~P~~iavdp~~g--~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~- 224 (349)
T 3v64_C 148 AHRKVLLWQSLEKPRAIALHPMEG--TIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH- 224 (349)
T ss_dssp CSCEEEECTTCSCEEEEEEETTTT--EEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTT-
T ss_pred CceEEEEeCCCCCcceEEEecCcC--eEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCC-
Confidence 999888888889999999999989 99999977658999999999999988888899999999999999999999887
Q ss_pred eeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCe--eeeEEEeccCCeEEEeecCceeeE
Q psy17325 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDLENGMLYYSTLKCTRWL 338 (461)
Q Consensus 261 ~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~--p~~iavd~~~~~lY~t~~~~~~~l 338 (461)
++|++++++|+.+++++...+ |.||+++ ++.||||+..
T Consensus 225 ---------------------------------~~I~~~~~dG~~~~~~~~~~~~~P~giav~--~~~ly~td~~----- 264 (349)
T 3v64_C 225 ---------------------------------HVIERANLDGSHRKAVISQGLPHPFAITVF--EDSLYWTDWH----- 264 (349)
T ss_dssp ---------------------------------TEEEEEETTSCSCEEEECSSCSSEEEEEEE--TTEEEEEETT-----
T ss_pred ---------------------------------CEEEEEeCCCCceEEEEeCCCCCceEEEEE--CCEEEEecCC-----
Confidence 468899999999888887666 9999995 6777777666
Q ss_pred EEeecCCCCceEEEe-ecCCCeEEEeeCCCCCceeEEEecCCCeEEE
Q psy17325 339 FWTDWGENPRIERIG-MDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384 (461)
Q Consensus 339 ~~~d~~~~~~I~~~~-~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~ 384 (461)
+++|.+++ .+|+..+++. ..+..|.||++.+.....+.
T Consensus 265 -------~~~V~~~~~~~G~~~~~i~-~~~~~p~gi~v~~~~~qp~~ 303 (349)
T 3v64_C 265 -------TKSINSANKFTGKNQEIIR-NKLHFPMDIHTLHPQRQPAG 303 (349)
T ss_dssp -------TTEEEEEETTTCCSCEEEE-CSCSCCCCEEEECGGGSCCC
T ss_pred -------CCeEEEEEccCCCccEEec-cCCCCCceEEEEccccCccc
Confidence 88999998 7999998887 78999999999866554443
No 15
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=100.00 E-value=5.4e-34 Score=276.16 Aligned_cols=242 Identities=29% Similarity=0.432 Sum_probs=207.2
Q ss_pred cceeEEEeccccceeecccccCcccccceEEEcCccceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcE-EEEecCCCC
Q psy17325 114 SAAFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLAKDNIT 192 (461)
Q Consensus 114 ~~~~l~~~~~~~I~~~~l~~~~~~~s~~~~~~~g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~-~~l~~~~~~ 192 (461)
..++|++++++.|+++++++... ...++..++..|.+|++|+..+.|||+|...++|.+++++|... ..++...+.
T Consensus 3 ~~p~ll~~~~~~I~~i~l~~~~~---~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~ 79 (318)
T 3sov_A 3 SAPLLLYANRRDLRLVDATNGKE---NATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLL 79 (318)
T ss_dssp -CCEEEEECEEEEEEEETTCTTS---CCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCS
T ss_pred CccEEEEEccCeEEEEECCCCce---EEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCC
Confidence 35789999999999999876542 12345567788889999988999999999999999999999853 455556678
Q ss_pred CceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeee
Q psy17325 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN 272 (461)
Q Consensus 193 ~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~ 272 (461)
.|.|||+|+..+ .|||+| ....+|++++++|+.+++++...+..|.|||+|+.+++|||+|....
T Consensus 80 ~p~glavd~~~g--~ly~~d-~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~------------ 144 (318)
T 3sov_A 80 SPDGLACDWLGE--KLYWTD-SETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEV------------ 144 (318)
T ss_dssp CCCEEEEETTTT--EEEEEE-TTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSS------------
T ss_pred CccEEEEEcCCC--eEEEEE-CCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCC------------
Confidence 899999999988 999999 45679999999999998888788999999999999999999986421
Q ss_pred eccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceE
Q psy17325 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350 (461)
Q Consensus 273 v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~ 350 (461)
++|++++++|+.+++++...+ |+||++|+.+++|||+|+. ..+|+
T Consensus 145 ---------------------~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~------------~~~I~ 191 (318)
T 3sov_A 145 ---------------------PKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAK------------LNFIH 191 (318)
T ss_dssp ---------------------CEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETT------------TTEEE
T ss_pred ---------------------CEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECC------------CCEEE
Confidence 469999999999998887666 9999999999999999888 89999
Q ss_pred EEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEc
Q psy17325 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILID 409 (461)
Q Consensus 351 ~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~ 409 (461)
++++||+.+++++...+.+|.||++| ++.|||+|++.++|.+++.. +|....++..
T Consensus 192 ~~d~dG~~~~~~~~~~~~~P~glav~--~~~lywtd~~~~~V~~~~~~-~G~~~~~i~~ 247 (318)
T 3sov_A 192 KSNLDGTNRQAVVKGSLPHPFALTLF--EDILYWTDWSTHSILACNKY-TGEGLREIHS 247 (318)
T ss_dssp EEETTSCSCEEEECSCCSCEEEEEEE--TTEEEEEETTTTEEEEEETT-TCCSCEEEEC
T ss_pred EEcCCCCceEEEecCCCCCceEEEEe--CCEEEEEecCCCeEEEEECC-CCCceEEEeC
Confidence 99999999999986689999999995 78999999999999999983 5665555443
No 16
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=100.00 E-value=1.2e-32 Score=266.84 Aligned_cols=237 Identities=24% Similarity=0.364 Sum_probs=200.8
Q ss_pred eeEEEeccccceeecccccCcccccceEEEcCccceeeeeeeecCCeEEEEeCCCCeEEEEeCCC----CcEEEEecCCC
Q psy17325 116 AFLIISNRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG----TNRIVLAKDNI 191 (461)
Q Consensus 116 ~~l~~~~~~~I~~~~l~~~~~~~s~~~~~~~g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G----~~~~~l~~~~~ 191 (461)
++|++++++.|+++++++..+ ..+..++..|.|+++|+.++.|||+|...++|.+++++| +....++...+
T Consensus 2 ~~ll~~~~~~I~~i~~~~~~~-----~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~ 76 (316)
T 1ijq_A 2 AYLFFTNRHEVRKMTLDRSEY-----TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI 76 (316)
T ss_dssp CEEEEECBSSEEEEETTSCCC-----EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC
T ss_pred CEEEEECCCeEEEEECCCcce-----EehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCC
Confidence 679999999999998876543 224567889999999999999999999999999999998 55566666667
Q ss_pred CCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceee
Q psy17325 192 TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271 (461)
Q Consensus 192 ~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~ 271 (461)
..|.|||+|+..+ .|||+| ....+|.+++++|..+++++...+..|.+|++|+.+++|||+|....
T Consensus 77 ~~p~glavd~~~~--~ly~~d-~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~----------- 142 (316)
T 1ijq_A 77 QAPDGLAVDWIHS--NIYWTD-SVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTP----------- 142 (316)
T ss_dssp SCCCEEEEETTTT--EEEEEE-TTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSS-----------
T ss_pred CCcCEEEEeecCC--eEEEEE-CCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCC-----------
Confidence 8899999999888 999999 55679999999999888888777889999999999999999987531
Q ss_pred eeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCce
Q psy17325 272 NVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349 (461)
Q Consensus 272 ~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I 349 (461)
++|++++++|+.+++++...+ |+||++|+.+++|||+|.. .++|
T Consensus 143 ----------------------~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~------------~~~I 188 (316)
T 1ijq_A 143 ----------------------AKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK------------LHSI 188 (316)
T ss_dssp ----------------------CEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETT------------TTEE
T ss_pred ----------------------CeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECC------------CCeE
Confidence 368999999999988876655 9999999999999999888 8899
Q ss_pred EEEeecCCCeEEEeeC--CCCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEE
Q psy17325 350 ERIGMDGSNRSTIIST--KIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILI 408 (461)
Q Consensus 350 ~~~~~dG~~~~~l~~~--~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~ 408 (461)
++++++|+.+++++.. .+.+|.||++| +++|||+|+..++|.+++.. +|....++.
T Consensus 189 ~~~d~dg~~~~~~~~~~~~~~~P~giav~--~~~ly~~d~~~~~V~~~~~~-~g~~~~~i~ 246 (316)
T 1ijq_A 189 SSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRL-TGSDVNLLA 246 (316)
T ss_dssp EEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETT-TCCCCEEEE
T ss_pred EEEecCCCceEEEeecCCccCCcEEEEEE--CCEEEEEECCCCeEEEEeCC-CCcceEEEe
Confidence 9999999999988753 57899999996 69999999999999999973 566555544
No 17
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=100.00 E-value=1e-32 Score=267.18 Aligned_cols=222 Identities=31% Similarity=0.616 Sum_probs=183.7
Q ss_pred eEEEEeCCCCeEEEEeCCCCc--EEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCc-EEEEecccc
Q psy17325 162 HIYWLDSRLNRIEVCDENGTN--RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR-STIISTKIY 238 (461)
Q Consensus 162 ~ly~~d~~~~~I~~~~~~G~~--~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~-~~i~~~~~~ 238 (461)
.|++++ .+.|.++++++.. .+.++ .++.+|.+|++|+..+ .|||+| ....+|.|++++|+.. +.++...+.
T Consensus 6 ~ll~~~--~~~I~~i~l~~~~~~~~~~~-~~~~~~~~ld~d~~~~--~lyw~D-~~~~~I~r~~~~g~~~~~~~~~~~l~ 79 (318)
T 3sov_A 6 LLLYAN--RRDLRLVDATNGKENATIVV-GGLEDAAAVDFVFSHG--LIYWSD-VSEEAIKRTEFNKTESVQNVVVSGLL 79 (318)
T ss_dssp EEEEEC--EEEEEEEETTCTTSCCEEEE-EEEEEEEEEEEEGGGT--EEEEEE-TTTTEEEEEETTSSSCCCEEEEECCS
T ss_pred EEEEEc--cCeEEEEECCCCceEEEEEe-cCCCccEEEEEEeCCC--EEEEEE-CCCCcEEEEEccCCCceEEEEcCCCC
Confidence 356665 3689999999874 33333 3456789999999888 999999 4567999999999853 456667788
Q ss_pred cceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCe--ee
Q psy17325 239 WPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YE 316 (461)
Q Consensus 239 ~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~--p~ 316 (461)
.|.|||+|+.+++|||+|... ++|.+++++|+.+++++...+ |+
T Consensus 80 ~p~glavd~~~g~ly~~d~~~----------------------------------~~I~~~~~dG~~~~~l~~~~~~~P~ 125 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSET----------------------------------NRIEVSNLDGSLRKVLFWQELDQPR 125 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTT----------------------------------TEEEEEETTSCSCEEEECSSCSSEE
T ss_pred CccEEEEEcCCCeEEEEECCC----------------------------------CEEEEEECCCCcEEEEEeCCCCCcc
Confidence 999999999999999999877 458899999999998886665 99
Q ss_pred eEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEE
Q psy17325 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396 (461)
Q Consensus 317 ~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~ 396 (461)
+|++||.+|.|| |+||+..++|+|+++||+.+++++...+.+|+||++|+.+++|||+|+..++|++++
T Consensus 126 giavdp~~g~ly-----------~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d 194 (318)
T 3sov_A 126 AIALDPSSGFMY-----------WTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSN 194 (318)
T ss_dssp EEEEEGGGTEEE-----------EEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCEEE-----------EEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEc
Confidence 999999877555 556666899999999999999998788999999999999999999999999999999
Q ss_pred ecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeCCCceee
Q psy17325 397 YDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447 (461)
Q Consensus 397 ~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~~~~~i~ 447 (461)
+ +|..+.++... .+ ..|++|+++++.|||||++++.|.
T Consensus 195 ~--dG~~~~~~~~~--~~---------~~P~glav~~~~lywtd~~~~~V~ 232 (318)
T 3sov_A 195 L--DGTNRQAVVKG--SL---------PHPFALTLFEDILYWTDWSTHSIL 232 (318)
T ss_dssp T--TSCSCEEEECS--CC---------SCEEEEEEETTEEEEEETTTTEEE
T ss_pred C--CCCceEEEecC--CC---------CCceEEEEeCCEEEEEecCCCeEE
Confidence 9 55555555431 11 348999999999999999998773
No 18
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=100.00 E-value=1e-31 Score=260.35 Aligned_cols=223 Identities=22% Similarity=0.451 Sum_probs=182.1
Q ss_pred EEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCC----CCcEEEEecccc
Q psy17325 163 IYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG----SNRSTIISTKIY 238 (461)
Q Consensus 163 ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG----~~~~~i~~~~~~ 238 (461)
|++++. +.|.++++++.....++. .+.+|.|+++|+..+ .|||+| ....+|.+++++| +..+.++...+.
T Consensus 4 ll~~~~--~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~--~ly~~D-~~~~~I~~~~~~g~~~~~~~~~~~~~~~~ 77 (316)
T 1ijq_A 4 LFFTNR--HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASN--RIYWSD-LSQRMICSTQLDRAHGVSSYDTVISRDIQ 77 (316)
T ss_dssp EEEECB--SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTT--EEEEEE-TTTTEEEEEEC--------CEEEECSSCS
T ss_pred EEEECC--CeEEEEECCCcceEehhc-CCCceEEEEEEeCCC--EEEEEE-CCCCcEEEEECCCCCCCcccEEEEeCCCC
Confidence 556554 579999999887666654 568899999999988 999999 4567999999998 566667766788
Q ss_pred cceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCe--ee
Q psy17325 239 WPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YE 316 (461)
Q Consensus 239 ~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~--p~ 316 (461)
.|.|||+|+.+++|||+|... ++|.+++++|+.+++++...+ |+
T Consensus 78 ~p~glavd~~~~~ly~~d~~~----------------------------------~~I~~~~~~g~~~~~~~~~~~~~P~ 123 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVL----------------------------------GTVSVADTKGVKRKTLFRENGSKPR 123 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTT----------------------------------TEEEEEETTSSSEEEEEECTTCCEE
T ss_pred CcCEEEEeecCCeEEEEECCC----------------------------------CEEEEEeCCCCceEEEEECCCCCcc
Confidence 999999999999999999877 458889999999888887555 99
Q ss_pred eEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEE
Q psy17325 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396 (461)
Q Consensus 317 ~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~ 396 (461)
+|++||.+|+|||+ ||+..++|+++++||+.+++++...+.+|+||++|+.+++|||+|+..++|++++
T Consensus 124 ~iavdp~~g~ly~~-----------d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d 192 (316)
T 1ijq_A 124 AIVVDPVHGFMYWT-----------DWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSID 192 (316)
T ss_dssp EEEEETTTTEEEEE-----------ECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eEEeCCCCCEEEEE-----------ccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEe
Confidence 99999998876665 5554589999999999999988778999999999999999999999999999999
Q ss_pred ecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeCCCceee
Q psy17325 397 YDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447 (461)
Q Consensus 397 ~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~~~~~i~ 447 (461)
+ +|..+.++......+ ..|.+|++++++|||||++++.|.
T Consensus 193 ~--dg~~~~~~~~~~~~~---------~~P~giav~~~~ly~~d~~~~~V~ 232 (316)
T 1ijq_A 193 V--NGGNRKTILEDEKRL---------AHPFSLAVFEDKVFWTDIINEAIF 232 (316)
T ss_dssp T--TSCSCEEEEECTTTT---------SSEEEEEEETTEEEEEETTTTEEE
T ss_pred c--CCCceEEEeecCCcc---------CCcEEEEEECCEEEEEECCCCeEE
Confidence 9 465555554422222 247899999999999999998773
No 19
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.97 E-value=6.6e-29 Score=234.45 Aligned_cols=241 Identities=23% Similarity=0.389 Sum_probs=198.7
Q ss_pred eeEEEeccccceeecccccCcccc-cceEEEcCccceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCc
Q psy17325 116 AFLIISNRHSILVADLEEKGKDHR-AQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP 194 (461)
Q Consensus 116 ~~l~~~~~~~I~~~~l~~~~~~~s-~~~~~~~g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p 194 (461)
++|++++...|+++++++.....- ...++......|+++++|+.+++|||+|...++|.+++++|.....++...+..|
T Consensus 2 ~~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p 81 (267)
T 1npe_A 2 THLLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSP 81 (267)
T ss_dssp EEEEEEEEEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCE
T ss_pred cEEEEEcCCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCc
Confidence 578888888899998876543210 1123333456899999999999999999999999999999988777776667889
Q ss_pred eeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeec
Q psy17325 195 RGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVN 274 (461)
Q Consensus 195 ~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~ 274 (461)
.+|++|+..+ .|||+| ....+|.+++++|+.++.++...+..|.+|++|+.+++|||++.....
T Consensus 82 ~~ia~d~~~~--~lyv~d-~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~------------- 145 (267)
T 1npe_A 82 EGIALDHLGR--TIFWTD-SQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDN------------- 145 (267)
T ss_dssp EEEEEETTTT--EEEEEE-TTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSS-------------
T ss_pred cEEEEEecCC--eEEEEE-CCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCC-------------
Confidence 9999999888 999999 456799999999988887777777899999999989999999976211
Q ss_pred cceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEE
Q psy17325 275 YSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352 (461)
Q Consensus 275 ~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~ 352 (461)
++|++..++|+..+++....+ |++|++|+.+++|||++.. .++|.++
T Consensus 146 -------------------~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~------------~~~I~~~ 194 (267)
T 1npe_A 146 -------------------PKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAG------------THRAECL 194 (267)
T ss_dssp -------------------CEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETT------------TTEEEEE
T ss_pred -------------------cEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECC------------CCEEEEE
Confidence 468899999998888775555 9999999999999999888 8899999
Q ss_pred eecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEE
Q psy17325 353 GMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407 (461)
Q Consensus 353 ~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~ 407 (461)
+++|..++.++ ..+..|.||++| +++|||+|...++|.+++.+ +|.....+
T Consensus 195 ~~~g~~~~~~~-~~~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~-~g~~~~~i 245 (267)
T 1npe_A 195 NPAQPGRRKVL-EGLQYPFAVTSY--GKNLYYTDWKTNSVIAMDLA-ISKEMDTF 245 (267)
T ss_dssp ETTEEEEEEEE-ECCCSEEEEEEE--TTEEEEEETTTTEEEEEETT-TTEEEEEE
T ss_pred ecCCCceEEEe-cCCCCceEEEEe--CCEEEEEECCCCeEEEEeCC-CCCceEEE
Confidence 99998877777 578899999996 69999999999999999993 35544433
No 20
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.96 E-value=1e-27 Score=226.34 Aligned_cols=223 Identities=25% Similarity=0.397 Sum_probs=181.6
Q ss_pred CeEEEEeCCCCeEEEEeCCCCcEE-----EEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEec
Q psy17325 161 GHIYWLDSRLNRIEVCDENGTNRI-----VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST 235 (461)
Q Consensus 161 ~~ly~~d~~~~~I~~~~~~G~~~~-----~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~ 235 (461)
..|||++. ++|.+++++|...+ .++.....+|.+|++|+..+ .|||+| ....+|.+++++|.....++..
T Consensus 2 ~~l~~~~~--~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~--~ly~~d-~~~~~I~~~~~~g~~~~~~~~~ 76 (267)
T 1npe_A 2 THLLFAQT--GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDK--VVYWTD-ISEPSIGRASLHGGEPTTIIRQ 76 (267)
T ss_dssp EEEEEEEE--EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTT--EEEEEE-TTTTEEEEEESSSCCCEEEECT
T ss_pred cEEEEEcC--CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCC--EEEEEE-CCCCEEEEEecCCCCcEEEEEC
Confidence 35888885 58999999987632 23332335799999999888 999999 4567999999999887777766
Q ss_pred ccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCe-
Q psy17325 236 KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL- 314 (461)
Q Consensus 236 ~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~- 314 (461)
.+..|.+|++|+.+++|||+|... ++|.+.+++|+..+++....+
T Consensus 77 ~~~~p~~ia~d~~~~~lyv~d~~~----------------------------------~~I~~~~~~g~~~~~~~~~~~~ 122 (267)
T 1npe_A 77 DLGSPEGIALDHLGRTIFWTDSQL----------------------------------DRIEVAKMDGTQRRVLFDTGLV 122 (267)
T ss_dssp TCCCEEEEEEETTTTEEEEEETTT----------------------------------TEEEEEETTSCSCEEEECSSCS
T ss_pred CCCCccEEEEEecCCeEEEEECCC----------------------------------CEEEEEEcCCCCEEEEEECCCC
Confidence 778999999999899999999876 458889999988877776554
Q ss_pred -eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEE
Q psy17325 315 -YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 393 (461)
Q Consensus 315 -p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~ 393 (461)
|++|++||.+++|||++.. ..+++|+++++||+..+++....+..|+||++|+.+++|||+|...++|.
T Consensus 123 ~P~~i~vd~~~g~lyv~~~~----------~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~ 192 (267)
T 1npe_A 123 NPRGIVTDPVRGNLYWTDWN----------RDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAE 192 (267)
T ss_dssp SEEEEEEETTTTEEEEEECC----------SSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred CccEEEEeeCCCEEEEEECC----------CCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEE
Confidence 9999999988887776543 12578999999999988887677889999999988999999999999999
Q ss_pred EEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeCCCcee
Q psy17325 394 FCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFL 446 (461)
Q Consensus 394 ~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~~~~~i 446 (461)
++++ +|..+..+... . ..|.+|+++++.|||++++++.|
T Consensus 193 ~~~~--~g~~~~~~~~~---~---------~~P~gi~~d~~~lyva~~~~~~v 231 (267)
T 1npe_A 193 CLNP--AQPGRRKVLEG---L---------QYPFAVTSYGKNLYYTDWKTNSV 231 (267)
T ss_dssp EEET--TEEEEEEEEEC---C---------CSEEEEEEETTEEEEEETTTTEE
T ss_pred EEec--CCCceEEEecC---C---------CCceEEEEeCCEEEEEECCCCeE
Confidence 9999 56554444321 1 23789999999999999998877
No 21
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.92 E-value=3.6e-23 Score=198.07 Aligned_cols=245 Identities=11% Similarity=0.195 Sum_probs=177.7
Q ss_pred cccceeecccccCcccccceEEEcCccceeeeeeeecCCeEEEEeCCC-------------CeEEEEeCCCCcEEEEecC
Q psy17325 123 RHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL-------------NRIEVCDENGTNRIVLAKD 189 (461)
Q Consensus 123 ~~~I~~~~l~~~~~~~s~~~~~~~g~~~p~~iavd~~~~~ly~~d~~~-------------~~I~~~~~~G~~~~~l~~~ 189 (461)
...|.+++.++... ..+..+ .+..+.++ ++.||+++... ..|.+++++|+.++.|...
T Consensus 36 ~~~ly~~~~dg~~~-----~~l~~~--~~~~i~~~--g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~ 106 (302)
T 3s25_A 36 NGRLYAMNIDGSNI-----HKLSND--TAMYINAD--KNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPD 106 (302)
T ss_dssp TTEEEEEETTSCSC-----EEEEEE--EEEEEEEC--SSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECS
T ss_pred CceEEEEcCCCCCC-----EEccCC--ceeeEEEc--CCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecC
Confidence 45677776665432 122222 24455554 88999998653 5799999999988777542
Q ss_pred CCCCceeEEEcCCCCceEEEEeec--CCCCcEEEEecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeeccc
Q psy17325 190 NITQPRGMMLDPSPGTRWLFWTDW--GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267 (461)
Q Consensus 190 ~~~~p~~ia~d~~~g~~~ly~td~--~~~~~I~~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~ 267 (461)
+ +.++.+..+ +|||++. .....|+++++||+.++.|..... +++||.+++|||++...
T Consensus 107 ----~-~~~~s~~g~--~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~-----~~~~~~g~~iy~t~~g~-------- 166 (302)
T 3s25_A 107 ----P-CIYASLIGN--YIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL-----FTCNTSDRYFYYNNPKN-------- 166 (302)
T ss_dssp ----C-EEEEEEETT--EEEEEEESSSSCEEEEEEETTSCCCEEEESSCC-----CCSEEETTEEEEECTTT--------
T ss_pred ----C-ccEEEEeCC--EEEEEeecCCCCceEEEEECCCCCeEEEeCCCc-----eEeeEECCEEEEEeCCC--------
Confidence 1 334555556 9999983 456899999999999988876533 56788899999998744
Q ss_pred ceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCeeeeEEEeccCCeEEEeecCceeeEEEeecCCCC
Q psy17325 268 EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347 (461)
Q Consensus 268 ~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~ 347 (461)
..|++++++|+.+++|... +..+++.|.++. |||++|+...
T Consensus 167 --------------------------~~Iy~~~l~g~~~~~l~~~--~~~~~~~P~g~~-----------iy~t~~~~~~ 207 (302)
T 3s25_A 167 --------------------------GQLYRYDTASQSEALFYDC--NCYKPVVLDDTN-----------VYYMDVNRDN 207 (302)
T ss_dssp --------------------------CCEEEEETTTTEEEEEECS--CEEEEEEEETTE-----------EEEEEGGGTT
T ss_pred --------------------------ceEEEEECCCCCEEEEeCC--CccceeeecCCE-----------EEEEEcCCCc
Confidence 4699999999998888654 333456677775 5556666568
Q ss_pred ceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEE-cCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcce
Q psy17325 348 RIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA-DSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPA 426 (461)
Q Consensus 348 ~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~-d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (461)
+|+|++|||+++++|.++.+ | .+|+.+++|||+ +...+.|+++++ +|..++.+.... .
T Consensus 208 ~I~~~~ldG~~~~~Lt~~~~--~---~~~~~g~~Iy~~~~~~~~~i~~~~~--DG~~r~~l~~~~--------------~ 266 (302)
T 3s25_A 208 AIVHVNINNPNPVVLTEANI--E---HYNVYGSLIFYQRGGDNPALCVVKN--DGTGFKELAKGE--------------F 266 (302)
T ss_dssp EEEEECSSSCCCEECSCSCE--E---EEEEETTEEEEEECSSSCEEEEEET--TSCCCEEEEESC--------------E
T ss_pred EEEEEECCCCCeEEEeCCCc--c---eEEECCCEEEEEECCCCcEEEEEEC--CCCccEEeeCCc--------------c
Confidence 99999999999999886555 3 377789999997 677799999999 555544444321 3
Q ss_pred EEEeeeCCEEEEEeCCCcee-ecceeEEeee
Q psy17325 427 LALDLENGMLYYSTEGAEFL-KTPLFCITRN 456 (461)
Q Consensus 427 ~~l~~~~~~lYwtd~~~~~i-~~~~~~~~~~ 456 (461)
.+|++++++|||||+..+.| |+++.|..+-
T Consensus 267 ~~i~i~~d~Iy~td~~~~~i~~~~~dGs~~~ 297 (302)
T 3s25_A 267 CNINVTSQYVYFTDFVSNKEYCTSTQNPDTI 297 (302)
T ss_dssp EEEEECSSEEEEEETTTCCEEEEESSSCCSC
T ss_pred ceEEEeCCEEEEEECCCCeEEEEECCCCCce
Confidence 47999999999999998766 5666554443
No 22
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.92 E-value=5.9e-23 Score=206.97 Aligned_cols=248 Identities=12% Similarity=0.103 Sum_probs=186.4
Q ss_pred Cccceeeeeeee-cCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCC---CcEEEE
Q psy17325 147 GLDLVEGLAYDW-IGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN---PRIERI 222 (461)
Q Consensus 147 g~~~p~~iavd~-~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~---~~I~~~ 222 (461)
++..|.+||+|+ ..++||++|.. ++|.++++++...+.+.. ....|.+|++|+..+ +||++|.... ..+...
T Consensus 135 ~~~~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~--~lyvad~~~~~~~~~v~~~ 210 (430)
T 3tc9_A 135 GFGGAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEAD--SMIITNDQNNNDRPNNYIL 210 (430)
T ss_dssp CCSCCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSS--EEEEEECCSCTTSEEEEEE
T ss_pred CCCCCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEEEEec-CCCCcceEEEeCCCC--EEEEEeCCCCcccceEEEE
Confidence 478999999998 58999999998 999999999987766655 557899999999877 8999996332 357777
Q ss_pred ecCCCCc--EEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEe
Q psy17325 223 GMDGSNR--STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300 (461)
Q Consensus 223 ~~dG~~~--~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~ 300 (461)
..+|... ..+. .+..|.++++|+.+++|||+|... ++|++.+
T Consensus 211 ~~~g~~~~~~~l~--~~~~p~giavdp~~g~lyv~d~~~----------------------------------~~V~~~~ 254 (430)
T 3tc9_A 211 TRESGFKVITELT--KGQNCNGAETHPINGELYFNSWNA----------------------------------GQVFRYD 254 (430)
T ss_dssp EGGGTSCSEEEEE--ECSSCCCEEECTTTCCEEEEETTT----------------------------------TEEEEEE
T ss_pred eCCCceeeeeeec--cCCCceEEEEeCCCCEEEEEECCC----------------------------------CEEEEEE
Confidence 7777654 2232 477899999999889999999877 4588888
Q ss_pred CCCCceEEEEeCCe---eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCC-----eEEEee--------
Q psy17325 301 MDGSNASILVSGQL---YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSN-----RSTIIS-------- 364 (461)
Q Consensus 301 ~~g~~~~~l~~~~~---p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~-----~~~l~~-------- 364 (461)
+++.....+..... |++|++||.++.|||++.. +++|.+.+.+|.. ..++..
T Consensus 255 ~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~------------~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~ 322 (430)
T 3tc9_A 255 FTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN------------QHYILRSDYDWKTKRLTTPYIVCGQQGAKDWV 322 (430)
T ss_dssp TTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT------------TTEEEEEEEETTTTEECCCEEEEECTTCBCCB
T ss_pred CCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC------------CCEEEEEeCCcccccccceEEEeccCCCCCCC
Confidence 88776644443322 9999999988889999888 8899999988752 223331
Q ss_pred ------CCCCCce-eEEEec-------CCCeEEEEcCCCCeEEEEEecCCCCeEEEEEcccccee---ec-c-CCCCCcc
Q psy17325 365 ------TKIYWPN-GLTLDI-------ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFT---ND-L-MGDNGVP 425 (461)
Q Consensus 365 ------~~l~~p~-glaiD~-------~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~---~~-~-~~~~~~~ 425 (461)
..+..|. |++++. .+++|||+|...++|.+++. +|....+...+..+.. .. . ....+..
T Consensus 323 dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~--~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~ 400 (430)
T 3tc9_A 323 DGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP--QGRVTTFAGRGSNGTSGYNDGDLRQEARFNH 400 (430)
T ss_dssp CEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT--TSEEEEEEECCTTSSSSCBCEETTTTCBCSS
T ss_pred CCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC--CCcEEEEEeCCCCCCCcccCCCchhhcEeCC
Confidence 1377899 899963 46899999999999999997 6766555543211111 00 0 0001345
Q ss_pred eEEEeee--CCEEEEEeCCCceeec
Q psy17325 426 ALALDLE--NGMLYYSTEGAEFLKT 448 (461)
Q Consensus 426 ~~~l~~~--~~~lYwtd~~~~~i~~ 448 (461)
|.+|+++ ++.||++|.++++||.
T Consensus 401 P~giavd~~~g~lyVaD~~n~rIr~ 425 (430)
T 3tc9_A 401 PEGIVYDEERECFFIGDRENRRIRK 425 (430)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEE
T ss_pred CcEEEEECCCCEEEEEECCCCeEEE
Confidence 7888887 5899999999999875
No 23
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.92 E-value=1.6e-22 Score=203.92 Aligned_cols=248 Identities=12% Similarity=0.091 Sum_probs=179.8
Q ss_pred Cccceeeeeeee--cCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCC---CCcEEE
Q psy17325 147 GLDLVEGLAYDW--IGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE---NPRIER 221 (461)
Q Consensus 147 g~~~p~~iavd~--~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~---~~~I~~ 221 (461)
.|..|.+|++|+ ..++|||+|.. ++|.++++.+.....+.. .+..|.+|++|+. | .||++|... ...+.+
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~~-~~~~P~giavd~d-G--~lyVad~~~~~~~~gv~~ 211 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKTT-NIGQCADVNFTLN-G--DMVVVDDQSSDTNTGIYL 211 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEECC-CCSCEEEEEECTT-C--CEEEEECCSCTTSEEEEE
T ss_pred ccCCCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEeec-CCCCccEEEECCC-C--CEEEEcCCCCcccceEEE
Confidence 578899999998 37999999998 999999996555555543 5678999999997 4 499999532 234666
Q ss_pred EecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeC
Q psy17325 222 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301 (461)
Q Consensus 222 ~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~ 301 (461)
...++..........+..|.++++|+..++|||+|... ++|++.++
T Consensus 212 ~~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~----------------------------------~~V~~~d~ 257 (433)
T 4hw6_A 212 FTRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHH----------------------------------AMISSYDP 257 (433)
T ss_dssp ECGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTC----------------------------------SEEEEECT
T ss_pred EECCCCeeccccccccCCCCEEEEeCCCCeEEEEECCC----------------------------------CEEEEEEC
Confidence 66655443111222578999999999899999999877 45788888
Q ss_pred C-CCceEEEEeCCe---eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCC-----eEEEee--------
Q psy17325 302 D-GSNASILVSGQL---YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSN-----RSTIIS-------- 364 (461)
Q Consensus 302 ~-g~~~~~l~~~~~---p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~-----~~~l~~-------- 364 (461)
+ |...+.+..... +.+|++||.++.|||++.. +++|.++++++.. ..+++.
T Consensus 258 ~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~------------~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~ 325 (433)
T 4hw6_A 258 ATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG------------KHCIYRVDYNRETGKLAVPYIVCGQHSSPGWV 325 (433)
T ss_dssp TTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETT------------TTEEEEEEBCTTTCCBCCCEEEEECTTCCCCB
T ss_pred CCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC------------CCEEEEEeCCCCCcccCcEEEEEecCCCCccC
Confidence 7 544244443322 6789999988889999988 8899998887532 223331
Q ss_pred ------CCCCCceeEEE---------ecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccc---cceeec-cC-CCCCc
Q psy17325 365 ------TKIYWPNGLTL---------DIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM---VEFTND-LM-GDNGV 424 (461)
Q Consensus 365 ------~~l~~p~glai---------D~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~---~~~~~~-~~-~~~~~ 424 (461)
..+.+|.||++ | .+++|||+|...++|.+++. +|....++.... .+.... .. ...+.
T Consensus 326 dg~~~~a~~~~P~giav~~n~~y~~dd-~~g~lyvaD~~n~~I~~~~~--~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~ 402 (433)
T 4hw6_A 326 DGMGTGARLWGPNQGIFVKNEAYAGEE-DEYDFYFCDRDSHTVRVLTP--EGRVTTYAGRGNSREWGYVDGELRSQALFN 402 (433)
T ss_dssp CEEGGGSBCSSEEEEEEEECGGGTTSS-CCEEEEEEETTTTEEEEECT--TSEEEEEECCCTTCSSCCBCEETTTTCBCS
T ss_pred CCcccceEEcCCccEEEEccccccccC-CCCcEEEEECCCCEEEEECC--CCCEEEEEeCCCCCccccCCCccccccEeC
Confidence 24778999999 6 88999999999999999998 776544443322 111000 00 01245
Q ss_pred ceEEEeee--CCEEEEEeCCCceeec
Q psy17325 425 PALALDLE--NGMLYYSTEGAEFLKT 448 (461)
Q Consensus 425 ~~~~l~~~--~~~lYwtd~~~~~i~~ 448 (461)
.|.+|+++ ++.||++|..+++||+
T Consensus 403 ~P~giavd~~~g~lyVaD~~n~rIr~ 428 (433)
T 4hw6_A 403 HPTSIAYDMKRKCFYIGDCDNHRVRK 428 (433)
T ss_dssp SEEEEEEETTTTEEEEEEGGGTEEEE
T ss_pred CCcEEEEECCCCEEEEEeCCCCEEEE
Confidence 58888888 7899999999999975
No 24
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.91 E-value=1.1e-21 Score=196.46 Aligned_cols=247 Identities=14% Similarity=0.157 Sum_probs=182.9
Q ss_pred CccceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCC
Q psy17325 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226 (461)
Q Consensus 147 g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG 226 (461)
.|..|.+|++| ..++|||+|...++|.++++++.....+... ...|. +++++..+ .|||++.....+|++.+.++
T Consensus 129 ~~~~P~~la~d-~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~--~l~~~d~~~~~~I~~~d~~~ 203 (409)
T 3hrp_A 129 KFKYMWGIAAV-GNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQ--RVYSIGWEGTHTVYVYMKAS 203 (409)
T ss_dssp CCCCEEEEEEC-STTEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSS--EEEEEBSSTTCEEEEEEGGG
T ss_pred ccCCceEEEEe-CCCCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCC--cEEEEecCCCceEEEEEcCC
Confidence 57889999999 4678999999999999999997776666554 35688 99999987 99999954445899999987
Q ss_pred CCcEEEE----ecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCC
Q psy17325 227 SNRSTII----STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMD 302 (461)
Q Consensus 227 ~~~~~i~----~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~ 302 (461)
......+ ......|.++++|+.+++||+++.. ++|++.+++
T Consensus 204 ~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~-----------------------------------~~I~~~d~~ 248 (409)
T 3hrp_A 204 GWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSN-----------------------------------KNFGRFNVK 248 (409)
T ss_dssp TTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTT-----------------------------------CEEEEEETT
T ss_pred CceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECC-----------------------------------CcEEEEECC
Confidence 6553333 2246789999999989999998763 357888887
Q ss_pred CCceEEE----EeCCe---ee-eEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCC--------
Q psy17325 303 GSNASIL----VSGQL---YE-ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTK-------- 366 (461)
Q Consensus 303 g~~~~~l----~~~~~---p~-~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~-------- 366 (461)
+....++ ..... |. +|++||.++.|||++.. +++|++.+.+|.. ..++...
T Consensus 249 ~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~------------~~~I~~~~~~g~~-~~~~g~~~~~g~~dg 315 (409)
T 3hrp_A 249 TQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN------------LSSVYKITPDGEC-EWFCGSATQKTVQDG 315 (409)
T ss_dssp TCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT------------TTEEEEECTTCCE-EEEEECTTCCSCBCE
T ss_pred CCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC------------CCEEEEEecCCCE-EEEEeCCCCCCcCCC
Confidence 7665554 22112 66 99999988999999988 8899999999873 3333232
Q ss_pred ------CCCceeEEEecCCCeEEEEcC-CCCeEEEEEecCCCCeEEEEEcc-ccceeecc-CCCCCcceEEEeeeC-CEE
Q psy17325 367 ------IYWPNGLTLDIATRRVYFADS-KLDFIDFCNYDGTGRQQVILIDL-MVEFTNDL-MGDNGVPALALDLEN-GML 436 (461)
Q Consensus 367 ------l~~p~glaiD~~~~~ly~~d~-~~~~I~~~~~~g~g~~~~~~~~~-~~~~~~~~-~~~~~~~~~~l~~~~-~~l 436 (461)
+.+|.||++|+ +++||++|. ..++|.++++. +|....+.... ..+..... ....+..|.+|+++. +.|
T Consensus 316 ~~~~~~~~~P~gia~d~-dG~lyvad~~~~~~I~~~~~~-~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~l 393 (409)
T 3hrp_A 316 LREEALFAQPNGMTVDE-DGNFYIVDGFKGYCLRKLDIL-DGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGY 393 (409)
T ss_dssp EGGGCBCSSEEEEEECT-TCCEEEEETTTTCEEEEEETT-TTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEE
T ss_pred cccccEeCCCeEEEEeC-CCCEEEEeCCCCCEEEEEECC-CCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCE
Confidence 78899999995 567999999 99999999952 56654444331 11110000 001134578888874 899
Q ss_pred EEEeCCCceeec
Q psy17325 437 YYSTEGAEFLKT 448 (461)
Q Consensus 437 Ywtd~~~~~i~~ 448 (461)
|++|+.+++||.
T Consensus 394 yVad~~n~~Ir~ 405 (409)
T 3hrp_A 394 WIAEAWGKAIRK 405 (409)
T ss_dssp EEEESTTCEEEE
T ss_pred EEEECCCCeEEE
Confidence 999999999864
No 25
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.89 E-value=4.8e-21 Score=193.24 Aligned_cols=252 Identities=14% Similarity=0.135 Sum_probs=185.8
Q ss_pred cCccceeeeeeee-cCCeEEEEeCCCCeEEEEeCCCCcEEEEecC---CCCCceeEEE-------cCCCCceEEEEeecC
Q psy17325 146 SGLDLVEGLAYDW-IGGHIYWLDSRLNRIEVCDENGTNRIVLAKD---NITQPRGMML-------DPSPGTRWLFWTDWG 214 (461)
Q Consensus 146 ~g~~~p~~iavd~-~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~---~~~~p~~ia~-------d~~~g~~~ly~td~~ 214 (461)
.+|..|.+|++|+ ..++||+++...++|.++++.+....+++.. .+..|++|++ |+..+ +||++|+.
T Consensus 136 ~~~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~--~lyvad~~ 213 (496)
T 3kya_A 136 CGFSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAE--YMIVAIDY 213 (496)
T ss_dssp BCCCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTC--EEEEEECC
T ss_pred cccCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCC--EEEEEeCC
Confidence 4577899999998 5899999999889999999999888877654 3557999999 99866 89999976
Q ss_pred C-----CCcEEEEe--cCCCCcE----EEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEE
Q psy17325 215 E-----NPRIERIG--MDGSNRS----TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLY 283 (461)
Q Consensus 215 ~-----~~~I~~~~--~dG~~~~----~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~y 283 (461)
. ...|..+. .+|.... ..+. ...+|.++++|+.+++||+++...+
T Consensus 214 ~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~-~~~~p~giavdp~~g~LYvtd~~~g----------------------- 269 (496)
T 3kya_A 214 DGKGDESPSVYIIKRNADGTFDDRSDIQLIA-AYKQCNGATIHPINGELYFNSYEKG----------------------- 269 (496)
T ss_dssp CTTGGGEEEEEEEECCTTSCCSTTSCEEEEE-EESCCCCEEECTTTCCEEEEETTTT-----------------------
T ss_pred CCCcccCceEEEEecCCCCceeecccceeec-cCCCceEEEEcCCCCeEEEEECCCC-----------------------
Confidence 4 23466664 3344431 2333 4679999999999999999999885
Q ss_pred EEecCCCCcceeeeEEeCC--------CCc-----------eEEEEeCC--e-eeeEEEeccCCeEEEeecCceeeEEEe
Q psy17325 284 WIDEGGNGVPLKIGKANMD--------GSN-----------ASILVSGQ--L-YEALALDLENGMLYYSTLKCTRWLFWT 341 (461)
Q Consensus 284 w~d~~~~~~~~~I~~~~~~--------g~~-----------~~~l~~~~--~-p~~iavd~~~~~lY~t~~~~~~~l~~~ 341 (461)
+|++.+++ |.. .+.++... . |++|+++|.++.||++|..
T Consensus 270 -----------~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~-------- 330 (496)
T 3kya_A 270 -----------QVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVIN-------- 330 (496)
T ss_dssp -----------EEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETT--------
T ss_pred -----------EEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCC--------
Confidence 45666654 222 22333322 2 9999999988889999988
Q ss_pred ecCCCCceEEEeecCCCe-----EEEee--------------CCCCCce-eEEEec------CCCeEEEEcCCCCeEEEE
Q psy17325 342 DWGENPRIERIGMDGSNR-----STIIS--------------TKIYWPN-GLTLDI------ATRRVYFADSKLDFIDFC 395 (461)
Q Consensus 342 d~~~~~~I~~~~~dG~~~-----~~l~~--------------~~l~~p~-glaiD~------~~~~ly~~d~~~~~I~~~ 395 (461)
+++|+|+++||... .+++- ..|.+|. |+++|. .++.||++|..+++|+++
T Consensus 331 ----~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i 406 (496)
T 3kya_A 331 ----NHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKV 406 (496)
T ss_dssp ----TTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEE
T ss_pred ----CCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEE
Confidence 89999999988652 33331 2467899 888873 578999999999999999
Q ss_pred EecCCCCeEEEEEcccc---------ceeec-cC-CCCCcceEEEeeeC--CEEEEEeCCCceeec
Q psy17325 396 NYDGTGRQQVILIDLMV---------EFTND-LM-GDNGVPALALDLEN--GMLYYSTEGAEFLKT 448 (461)
Q Consensus 396 ~~~g~g~~~~~~~~~~~---------~~~~~-~~-~~~~~~~~~l~~~~--~~lYwtd~~~~~i~~ 448 (461)
+. +|...++...+.. +.... .. ...+..|.+|+++. +.||++|..+++||+
T Consensus 407 ~~--~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrk 470 (496)
T 3kya_A 407 TP--EGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRT 470 (496)
T ss_dssp CT--TCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred eC--CCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEE
Confidence 98 7876666554321 11100 00 11255688998884 899999999999975
No 26
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.86 E-value=1.1e-19 Score=176.66 Aligned_cols=240 Identities=16% Similarity=0.100 Sum_probs=174.1
Q ss_pred CccceeeeeeeecCCeEEEEeCCC------------------------CeEEEEeCC-CCcEEEEecCCCCCceeEEEcC
Q psy17325 147 GLDLVEGLAYDWIGGHIYWLDSRL------------------------NRIEVCDEN-GTNRIVLAKDNITQPRGMMLDP 201 (461)
Q Consensus 147 g~~~p~~iavd~~~~~ly~~d~~~------------------------~~I~~~~~~-G~~~~~l~~~~~~~p~~ia~d~ 201 (461)
.+..|.+||+|+ .++||+++... ++|.+.+.+ |+.........+..|.+|++|+
T Consensus 22 ~l~~v~~va~d~-~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~ 100 (329)
T 3fvz_A 22 LPGQVSGVALDS-KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDT 100 (329)
T ss_dssp CCSCEEEEEECT-TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECT
T ss_pred ecCCceEEEECC-CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECC
Confidence 456799999996 57999999887 469999986 7765555555677899999998
Q ss_pred CCCceEEEEeecCCCCcEEEEecCCC--CcEEEE--------ecccccceeEEeeccCCeeEEecC-CCceeeeccccee
Q psy17325 202 SPGTRWLFWTDWGENPRIERIGMDGS--NRSTII--------STKIYWPNGLTLDIATRRVYFADS-KLDFIDCKSLEIK 270 (461)
Q Consensus 202 ~~g~~~ly~td~~~~~~I~~~~~dG~--~~~~i~--------~~~~~~P~glavD~~~~~ly~~d~-~~~~i~~~~~~~~ 270 (461)
. | .||++| ..+.+|.+.+.+|. ....+. ...+..|.+|++|+.+++||++|. ..
T Consensus 101 ~-g--~l~v~d-~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~----------- 165 (329)
T 3fvz_A 101 D-G--NYWVTD-VALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCN----------- 165 (329)
T ss_dssp T-S--CEEEEE-TTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSC-----------
T ss_pred C-C--CEEEEE-CCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCC-----------
Confidence 5 5 599999 55679999999987 344443 234668999999987899999996 45
Q ss_pred eeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeC---------Ce--eeeEEEeccCCeEEEeecCceeeEE
Q psy17325 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG---------QL--YEALALDLENGMLYYSTLKCTRWLF 339 (461)
Q Consensus 271 ~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~---------~~--p~~iavd~~~~~lY~t~~~~~~~l~ 339 (461)
++|.+.+.+|.....+... .+ |.+|++|+.+++||+++..
T Consensus 166 -----------------------~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~------ 216 (329)
T 3fvz_A 166 -----------------------SRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE------ 216 (329)
T ss_dssp -----------------------CEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT------
T ss_pred -----------------------CeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC------
Confidence 3577777777766655321 22 9999999988999999988
Q ss_pred EeecCCCCceEEEeec-CCCeEEEeeC-CCCCceeEEEec-----CCCeEEEEcCCCCeEEEEEecCCCCeEEEEEcccc
Q psy17325 340 WTDWGENPRIERIGMD-GSNRSTIIST-KIYWPNGLTLDI-----ATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412 (461)
Q Consensus 340 ~~d~~~~~~I~~~~~d-G~~~~~l~~~-~l~~p~glaiD~-----~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~ 412 (461)
+++|.+.+.+ |+....+... ....|.++++.+ .++++|+++....+|..+++. +|.....+.....
T Consensus 217 ------~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~-~g~~~~~~~~~~~ 289 (329)
T 3fvz_A 217 ------NGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFS-SGEIIDVFKPVRK 289 (329)
T ss_dssp ------TTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETT-TCCEEEEECCSSS
T ss_pred ------CCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcC-CCeEEEEEcCCCC
Confidence 8899999987 7766665422 223455444432 345677777777899999973 5665444321111
Q ss_pred ceeeccCCCCCcceEEEeee-CCEEEEEeCCCceee
Q psy17325 413 EFTNDLMGDNGVPALALDLE-NGMLYYSTEGAEFLK 447 (461)
Q Consensus 413 ~~~~~~~~~~~~~~~~l~~~-~~~lYwtd~~~~~i~ 447 (461)
. +..|.+|+++ +|.||++|..+++|+
T Consensus 290 ~---------~~~p~~ia~~~dG~lyvad~~~~~I~ 316 (329)
T 3fvz_A 290 H---------FDMPHDIVASEDGTVYIGDAHTNTVW 316 (329)
T ss_dssp C---------CSSEEEEEECTTSEEEEEESSSCCEE
T ss_pred c---------cCCeeEEEECCCCCEEEEECCCCEEE
Confidence 1 2236777775 459999999999875
No 27
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.84 E-value=2.2e-19 Score=180.92 Aligned_cols=226 Identities=14% Similarity=0.224 Sum_probs=162.6
Q ss_pred eeEEEecc-ccceeecccccCcccccceEEEcCccceeeeeeeecCCeEEEEeCCCC----eEEEEeCCCCcE--EEEec
Q psy17325 116 AFLIISNR-HSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN----RIEVCDENGTNR--IVLAK 188 (461)
Q Consensus 116 ~~l~~~~~-~~I~~~~l~~~~~~~s~~~~~~~g~~~p~~iavd~~~~~ly~~d~~~~----~I~~~~~~G~~~--~~l~~ 188 (461)
..|++++. +.|+++++++... ..+..++..|.+|++|+.++.|||+|...+ .+.+.+.+|... ..+.
T Consensus 150 g~Lyv~d~~~~I~~id~~~~~v-----~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~- 223 (430)
T 3tc9_A 150 NHLYLVGEQHPTRLIDFEKEYV-----STVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELT- 223 (430)
T ss_dssp EEEEEEEBTEEEEEEETTTTEE-----EEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEE-
T ss_pred CeEEEEeCCCcEEEEECCCCEE-----EEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeec-
Confidence 34555554 5666666654321 123457788999999988888999998544 567788888664 3333
Q ss_pred CCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEec-ccccceeEEeeccCCeeEEecCCCceeeeccc
Q psy17325 189 DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST-KIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267 (461)
Q Consensus 189 ~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~-~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~ 267 (461)
.+..|.++++||..| .|||+|+. +.+|+++++++.....+... ...+|.+|++|+.+++|||+|...++
T Consensus 224 -~~~~p~giavdp~~g--~lyv~d~~-~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~------ 293 (430)
T 3tc9_A 224 -KGQNCNGAETHPING--ELYFNSWN-AGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHY------ 293 (430)
T ss_dssp -ECSSCCCEEECTTTC--CEEEEETT-TTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTE------
T ss_pred -cCCCceEEEEeCCCC--EEEEEECC-CCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCE------
Confidence 357899999999878 99999954 57999999998765344332 34689999999988889999998855
Q ss_pred ceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCc-----eEEEEeC--------------Ce--ee-eEEEec---
Q psy17325 268 EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN-----ASILVSG--------------QL--YE-ALALDL--- 322 (461)
Q Consensus 268 ~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~-----~~~l~~~--------------~~--p~-~iavd~--- 322 (461)
|.+.+++|.. ..++... .+ |. +++++.
T Consensus 294 ----------------------------I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y 345 (430)
T 3tc9_A 294 ----------------------------ILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAY 345 (430)
T ss_dssp ----------------------------EEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGG
T ss_pred ----------------------------EEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccc
Confidence 4444444421 1122211 12 88 899963
Q ss_pred ----cCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEee----------------CCCCCceeEEEecCCCeE
Q psy17325 323 ----ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS----------------TKIYWPNGLTLDIATRRV 382 (461)
Q Consensus 323 ----~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~----------------~~l~~p~glaiD~~~~~l 382 (461)
..|.|||+|.. +++|.+.+.+|...++... ..+.+|.||++|+.++.|
T Consensus 346 ~~~D~~g~lyvaD~~------------n~~I~~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~l 413 (430)
T 3tc9_A 346 KGSSDEYDFYFCDRE------------NHCIRILTPQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECF 413 (430)
T ss_dssp TTSSCCEEEEEEEGG------------GTEEEEECTTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEE
T ss_pred cccCCCCeEEEEECC------------CcEEEEECCCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEE
Confidence 35788888877 8899999988854443321 126689999999778999
Q ss_pred EEEcCCCCeEEEEEe
Q psy17325 383 YFADSKLDFIDFCNY 397 (461)
Q Consensus 383 y~~d~~~~~I~~~~~ 397 (461)
|++|..+++|.++++
T Consensus 414 yVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 414 FIGDRENRRIRKIGY 428 (430)
T ss_dssp EEEEGGGTEEEEEEE
T ss_pred EEEECCCCeEEEEcc
Confidence 999999999999988
No 28
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.84 E-value=7.1e-20 Score=175.15 Aligned_cols=208 Identities=14% Similarity=0.264 Sum_probs=156.4
Q ss_pred ccccceeecccccCcccccceEEEcCccceeeeeeeecCCeEEEEe---CCCCeEEEEeCCCCcEEEEecCCCCCceeEE
Q psy17325 122 NRHSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLD---SRLNRIEVCDENGTNRIVLAKDNITQPRGMM 198 (461)
Q Consensus 122 ~~~~I~~~~l~~~~~~~s~~~~~~~g~~~p~~iavd~~~~~ly~~d---~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia 198 (461)
++..|+++++++... ..+..+. +.++...++.|||++ .....|.+.+++|+.++.|..... ++
T Consensus 86 n~~~Iy~i~~dg~~~-----~~l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~-----~~ 151 (302)
T 3s25_A 86 DRNSLCRIKRNGHGS-----TVLDPDP----CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL-----FT 151 (302)
T ss_dssp CSEEEEEEETTSCCC-----EEEECSC----EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC-----CC
T ss_pred CCCeEEEEeCCCCcc-----eEeecCC----ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc-----eE
Confidence 356778887776542 2333332 335555799999999 677899999999999888877543 45
Q ss_pred EcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeecccee
Q psy17325 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTI 278 (461)
Q Consensus 199 ~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~ 278 (461)
++|..+ .|||++- ..++|++++++|+.++.|... +..++++|.++.|||++....
T Consensus 152 ~~~~g~--~iy~t~~-g~~~Iy~~~l~g~~~~~l~~~----~~~~~~~P~g~~iy~t~~~~~------------------ 206 (302)
T 3s25_A 152 CNTSDR--YFYYNNP-KNGQLYRYDTASQSEALFYDC----NCYKPVVLDDTNVYYMDVNRD------------------ 206 (302)
T ss_dssp SEEETT--EEEEECT-TTCCEEEEETTTTEEEEEECS----CEEEEEEEETTEEEEEEGGGT------------------
T ss_pred eeEECC--EEEEEeC-CCceEEEEECCCCCEEEEeCC----CccceeeecCCEEEEEEcCCC------------------
Confidence 677777 9999994 568999999999988877543 333456677888888775432
Q ss_pred eeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCeeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCC
Q psy17325 279 FRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSN 358 (461)
Q Consensus 279 ~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~ 358 (461)
..|++++++|+.+++|....+|. ++|.+++|||++. +..+.|+++++||+.
T Consensus 207 ---------------~~I~~~~ldG~~~~~Lt~~~~~~---~~~~g~~Iy~~~~-----------~~~~~i~~~~~DG~~ 257 (302)
T 3s25_A 207 ---------------NAIVHVNINNPNPVVLTEANIEH---YNVYGSLIFYQRG-----------GDNPALCVVKNDGTG 257 (302)
T ss_dssp ---------------TEEEEECSSSCCCEECSCSCEEE---EEEETTEEEEEEC-----------SSSCEEEEEETTSCC
T ss_pred ---------------cEEEEEECCCCCeEEEeCCCcce---EEECCCEEEEEEC-----------CCCcEEEEEECCCCc
Confidence 36999999999999888765554 7777888887522 225799999999999
Q ss_pred eEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCC
Q psy17325 359 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR 402 (461)
Q Consensus 359 ~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~ 402 (461)
++.|.... ..+|++ .+++|||+|...+.|.++++||++.
T Consensus 258 r~~l~~~~---~~~i~i--~~d~Iy~td~~~~~i~~~~~dGs~~ 296 (302)
T 3s25_A 258 FKELAKGE---FCNINV--TSQYVYFTDFVSNKEYCTSTQNPDT 296 (302)
T ss_dssp CEEEEESC---EEEEEE--CSSEEEEEETTTCCEEEEESSSCCS
T ss_pred cEEeeCCc---cceEEE--eCCEEEEEECCCCeEEEEECCCCCc
Confidence 99988542 335555 9999999999999999999965554
No 29
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.84 E-value=2e-18 Score=163.60 Aligned_cols=237 Identities=14% Similarity=0.205 Sum_probs=174.9
Q ss_pred CccceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEec-----CCCCCceeEEEcCCCCceEEEEeecCCCCcEEE
Q psy17325 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK-----DNITQPRGMMLDPSPGTRWLFWTDWGENPRIER 221 (461)
Q Consensus 147 g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~-----~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~ 221 (461)
.+..|.++++|. .++||+++...++|.+.+++|.....+.. ..+..|.+|++++..| .||+++......|.+
T Consensus 28 ~~~~p~~v~~~~-~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g--~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 28 QFTEPSGVAVNA-QNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSG--DIIVTERSPTHQIQI 104 (286)
T ss_dssp CBSCEEEEEECT-TCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTT--EEEEEECGGGCEEEE
T ss_pred ccCCCceEEECC-CCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCC--eEEEEcCCCCCEEEE
Confidence 356799999996 56899999999999999999887655532 2345799999976667 899999433578999
Q ss_pred EecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeC
Q psy17325 222 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301 (461)
Q Consensus 222 ~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~ 301 (461)
.+.+|.....+.......|.+|++|+ .++||+++.... .|.+.+.
T Consensus 105 ~d~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~----------------------------------~i~~~~~ 149 (286)
T 1q7f_A 105 YNQYGQFVRKFGATILQHPRGVTVDN-KGRIIVVECKVM----------------------------------RVIIFDQ 149 (286)
T ss_dssp ECTTSCEEEEECTTTCSCEEEEEECT-TSCEEEEETTTT----------------------------------EEEEECT
T ss_pred ECCCCcEEEEecCccCCCceEEEEeC-CCCEEEEECCCC----------------------------------EEEEEcC
Confidence 99888655544434556899999997 467999987663 4677777
Q ss_pred CCCceEEEEe-CCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeC-CCCCceeEEEec
Q psy17325 302 DGSNASILVS-GQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST-KIYWPNGLTLDI 377 (461)
Q Consensus 302 ~g~~~~~l~~-~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~-~l~~p~glaiD~ 377 (461)
+|.....+.. ... |++|++|+ .|+||+++.. +++|.+.+.+|.....+... .+..|.+|++|+
T Consensus 150 ~g~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~------------~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~ 216 (286)
T 1q7f_A 150 NGNVLHKFGCSKHLEFPNGVVVND-KQEIFISDNR------------AHCVKVFNYEGQYLRQIGGEGITNYPIGVGINS 216 (286)
T ss_dssp TSCEEEEEECTTTCSSEEEEEECS-SSEEEEEEGG------------GTEEEEEETTCCEEEEESCTTTSCSEEEEEECT
T ss_pred CCCEEEEeCCCCccCCcEEEEECC-CCCEEEEECC------------CCEEEEEcCCCCEEEEEccCCccCCCcEEEECC
Confidence 7765555543 222 99999997 5779999877 67888888888765555432 367899999994
Q ss_pred CCCeEEEEcCCCC-eEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeee-CCEEEEEeCCCceeec
Q psy17325 378 ATRRVYFADSKLD-FIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLE-NGMLYYSTEGAEFLKT 448 (461)
Q Consensus 378 ~~~~ly~~d~~~~-~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~lYwtd~~~~~i~~ 448 (461)
+++||+++...+ +|.+++. +|.....+...... ..|.+|++. ++.||+++. +++|++
T Consensus 217 -~G~l~v~~~~~~~~i~~~~~--~g~~~~~~~~~~~~----------~~~~~i~~~~~g~l~vs~~-~~~v~v 275 (286)
T 1q7f_A 217 -NGEILIADNHNNFNLTIFTQ--DGQLISALESKVKH----------AQCFDVALMDDGSVVLASK-DYRLYI 275 (286)
T ss_dssp -TCCEEEEECSSSCEEEEECT--TSCEEEEEEESSCC----------SCEEEEEEETTTEEEEEET-TTEEEE
T ss_pred -CCCEEEEeCCCCEEEEEECC--CCCEEEEEcccCCC----------CcceeEEECCCCcEEEECC-CCeEEE
Confidence 679999999886 9999998 67665444332111 125667665 579999985 566643
No 30
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.83 E-value=6.6e-19 Score=165.15 Aligned_cols=231 Identities=21% Similarity=0.353 Sum_probs=166.3
Q ss_pred ceeeeeeeecCCeEEE-EeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCC
Q psy17325 150 LVEGLAYDWIGGHIYW-LDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~-~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~ 228 (461)
.|.++++|. .++||+ ++...++|.+.+.++.....+....+..|.+|++|+. | .||+++. ...|.+.+.+|..
T Consensus 25 ~p~~i~~~~-~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~-g--~l~v~~~--~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 25 SPSGVAVDS-AGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGA-G--TVYVTDF--NNRVVTLAAGSNN 98 (270)
T ss_dssp CEEEEEECT-TCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTT-C--CEEEEET--TTEEEEECTTCSC
T ss_pred CccceEECC-CCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCC-C--CEEEEcC--CCEEEEEeCCCce
Confidence 899999996 457999 9999999999998776655444445568999999985 5 6999994 6799999999876
Q ss_pred cEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEE
Q psy17325 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308 (461)
Q Consensus 229 ~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~ 308 (461)
...+....+..|.+|++|+ .++||+++...+ .|.+.+........
T Consensus 99 ~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~----------------------------------~i~~~~~~~~~~~~ 143 (270)
T 1rwi_B 99 QTVLPFDGLNYPEGLAVDT-QGAVYVADRGNN----------------------------------RVVKLAAGSKTQTV 143 (270)
T ss_dssp CEECCCCSCSSEEEEEECT-TCCEEEEEGGGT----------------------------------EEEEECTTCCSCEE
T ss_pred EeeeecCCcCCCcceEECC-CCCEEEEECCCC----------------------------------EEEEEECCCceeEe
Confidence 6555444567899999997 567999987653 35555433222222
Q ss_pred EEeCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEc
Q psy17325 309 LVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 386 (461)
Q Consensus 309 l~~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d 386 (461)
...... |.+|++|+ .|+||+++.. +++|.+.+.++..........+..|.+|++|+ +++||+++
T Consensus 144 ~~~~~~~~p~~i~~~~-~g~l~v~~~~------------~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~-~g~l~v~~ 209 (270)
T 1rwi_B 144 LPFTGLNDPDGVAVDN-SGNVYVTDTD------------NNRVVKLEAESNNQVVLPFTDITAPWGIAVDE-AGTVYVTE 209 (270)
T ss_dssp CCCCSCCSCCCEEECT-TCCEEEEEGG------------GTEEEEECTTTCCEEECCCSSCCSEEEEEECT-TCCEEEEE
T ss_pred eccccCCCceeEEEeC-CCCEEEEECC------------CCEEEEEecCCCceEeecccCCCCceEEEECC-CCCEEEEE
Confidence 222222 99999997 4569998876 67899998888766554445668899999995 56999999
Q ss_pred CCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeee-CCEEEEEeCCCceeec
Q psy17325 387 SKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLE-NGMLYYSTEGAEFLKT 448 (461)
Q Consensus 387 ~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~lYwtd~~~~~i~~ 448 (461)
...+.|.+++. +|....... ..+ +..|.+|+++ ++.||+++.++++|++
T Consensus 210 ~~~~~v~~~~~--~~~~~~~~~--~~~---------~~~p~~i~~~~~g~l~v~~~~~~~v~~ 259 (270)
T 1rwi_B 210 HNTNQVVKLLA--GSTTSTVLP--FTG---------LNTPLAVAVDSDRTVYVADRGNDRVVK 259 (270)
T ss_dssp TTTSCEEEECT--TCSCCEECC--CCS---------CSCEEEEEECTTCCEEEEEGGGTEEEE
T ss_pred CCCCcEEEEcC--CCCcceeec--cCC---------CCCceeEEECCCCCEEEEECCCCEEEE
Confidence 99999999999 454422211 111 1236677775 4689999999998854
No 31
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.82 E-value=3.3e-18 Score=165.51 Aligned_cols=256 Identities=11% Similarity=0.121 Sum_probs=172.6
Q ss_pred CccceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEec-C------------------CCCCceeEEEcCCCCceE
Q psy17325 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK-D------------------NITQPRGMMLDPSPGTRW 207 (461)
Q Consensus 147 g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~-~------------------~~~~p~~ia~d~~~g~~~ 207 (461)
.+..|+++++|. .+++||++...++|.+.+.++...+.+.. . ....|.+|++|+..| .
T Consensus 17 ~~~~p~~i~~d~-~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g--~ 93 (322)
T 2fp8_A 17 PSYAPNSFTFDS-TNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN--Q 93 (322)
T ss_dssp SSSCCCCEECCT-TCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT--E
T ss_pred ccCCceEEEEcC-CCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCC--c
Confidence 477899999996 47888899999999999988765444321 1 124699999998667 8
Q ss_pred EEEeecCCCCcEEEEecCCCCcEEEEec----ccccceeEEeeccCCeeEEecCCCce-eeecccceeeeeccceeeeEE
Q psy17325 208 LFWTDWGENPRIERIGMDGSNRSTIIST----KIYWPNGLTLDIATRRVYFADSKLDF-IDCKSLEIKTNVNYSTIFRKL 282 (461)
Q Consensus 208 ly~td~~~~~~I~~~~~dG~~~~~i~~~----~~~~P~glavD~~~~~ly~~d~~~~~-i~~~~~~~~~~v~~~~~~~~~ 282 (461)
||++|.. ..|.+++.++...+.+... .+..|++|++|+..++||++|..... +..... .
T Consensus 94 l~v~d~~--~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~--------------~ 157 (322)
T 2fp8_A 94 LYIVDCY--YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQ--------------I 157 (322)
T ss_dssp EEEEETT--TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHH--------------H
T ss_pred EEEEECC--CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccce--------------e
Confidence 9999943 4588888875444444321 34579999999746799999865310 000000 0
Q ss_pred EEEecCCCCcceeeeEEeCCCCceEEEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCC---C
Q psy17325 283 YWIDEGGNGVPLKIGKANMDGSNASILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGS---N 358 (461)
Q Consensus 283 yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~---~ 358 (461)
+..... .+.|++.+.++...+++..... |++|++++.++.||+++.. +++|.+.++++. .
T Consensus 158 -~~~~~~---~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~------------~~~I~~~~~~~~~~~~ 221 (322)
T 2fp8_A 158 -MDTSDK---TGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFL------------SHQIVKYWLEGPKKGT 221 (322)
T ss_dssp -HHHTCC---CEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGG------------GTEEEEEESSSTTTTC
T ss_pred -hcccCC---CceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCC------------CCeEEEEECCCCcCCc
Confidence 000000 0457788777655555444322 9999999988889999887 778999988863 3
Q ss_pred eEEEeeCCCCCceeEEEecCCCeEEEEcCC----------CCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEE
Q psy17325 359 RSTIISTKIYWPNGLTLDIATRRVYFADSK----------LDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALA 428 (461)
Q Consensus 359 ~~~l~~~~l~~p~glaiD~~~~~ly~~d~~----------~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (461)
.+++.. ... |.||++| .+|+||+++.. .+.|.+++. +|.....+.... +. .+..+.+
T Consensus 222 ~~~~~~-~~g-P~gi~~d-~~G~l~va~~~~~~~~~~~~~~~~v~~~d~--~G~~~~~~~~~~-g~-------~~~~~~~ 288 (322)
T 2fp8_A 222 AEVLVK-IPN-PGNIKRN-ADGHFWVSSSEELDGNMHGRVDPKGIKFDE--FGNILEVIPLPP-PF-------AGEHFEQ 288 (322)
T ss_dssp EEEEEE-CSS-EEEEEEC-TTSCEEEEEEEETTSSTTSCEEEEEEEECT--TSCEEEEEECCT-TT-------TTSCCCE
T ss_pred cceEEe-CCC-CCCeEEC-CCCCEEEEecCcccccccCCCccEEEEECC--CCCEEEEEECCC-CC-------ccccceE
Confidence 344442 223 9999999 56789999876 567889988 677654443321 11 1123566
Q ss_pred EeeeCCEEEEEeCCCcee-ecce
Q psy17325 429 LDLENGMLYYSTEGAEFL-KTPL 450 (461)
Q Consensus 429 l~~~~~~lYwtd~~~~~i-~~~~ 450 (461)
++..+++||+++..++.| ++.+
T Consensus 289 ~~~~~g~L~v~~~~~~~i~~~~~ 311 (322)
T 2fp8_A 289 IQEHDGLLYIGTLFHGSVGILVY 311 (322)
T ss_dssp EEEETTEEEEECSSCSEEEEEEC
T ss_pred EEEeCCEEEEeecCCCceEEEec
Confidence 777889999999888776 4443
No 32
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.82 E-value=8.4e-19 Score=176.62 Aligned_cols=225 Identities=10% Similarity=0.121 Sum_probs=157.3
Q ss_pred eeEEEecc-ccceeecccccCcccccceEEEcCccceeeeeeeecCCeEEEEeCCC----CeEEEEeCCCCcE-EEEecC
Q psy17325 116 AFLIISNR-HSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRL----NRIEVCDENGTNR-IVLAKD 189 (461)
Q Consensus 116 ~~l~~~~~-~~I~~~~l~~~~~~~s~~~~~~~g~~~p~~iavd~~~~~ly~~d~~~----~~I~~~~~~G~~~-~~l~~~ 189 (461)
..|++++. +.|+++++.+... ..+...+..|.+|++|+.++ |||+|... ..+...+.++... ...+.
T Consensus 153 g~Lyv~D~~~~I~~id~~~g~v-----~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~- 225 (433)
T 4hw6_A 153 DDLYWVGQRDAFRHVDFVNQYV-----DIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLC- 225 (433)
T ss_dssp CEEEEECBTSCEEEEETTTTEE-----EEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEE-
T ss_pred CEEEEEeCCCCEEEEECCCCEE-----EEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeecccccc-
Confidence 34555554 5666776532211 12344678899999998766 99999853 2355566555443 12222
Q ss_pred CCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecC-CCCcEEEEec-ccccceeEEeeccCCeeEEecCCCceeeeccc
Q psy17325 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD-GSNRSTIIST-KIYWPNGLTLDIATRRVYFADSKLDFIDCKSL 267 (461)
Q Consensus 190 ~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~d-G~~~~~i~~~-~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~ 267 (461)
.+..|.+|++|+..| .|||+|+ .+.+|++++.+ |...+.+... ...+|.+|++|+.+++||++|....+
T Consensus 226 ~~~~P~giavd~~~G--~lyv~d~-~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~------ 296 (433)
T 4hw6_A 226 NARGAKTCAVHPQNG--KIYYTRY-HHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHC------ 296 (433)
T ss_dssp ECSSBCCCEECTTTC--CEEECBT-TCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTE------
T ss_pred ccCCCCEEEEeCCCC--eEEEEEC-CCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCE------
Confidence 457899999999878 9999994 45799999998 5442344332 34467789999988889999998854
Q ss_pred ceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCc-----eEEEEeC--------------Ce--eeeEEE------
Q psy17325 268 EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN-----ASILVSG--------------QL--YEALAL------ 320 (461)
Q Consensus 268 ~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~-----~~~l~~~--------------~~--p~~iav------ 320 (461)
|.+.++++.. ..++... .+ |.+|++
T Consensus 297 ----------------------------I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y 348 (433)
T 4hw6_A 297 ----------------------------IYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAY 348 (433)
T ss_dssp ----------------------------EEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGG
T ss_pred ----------------------------EEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccc
Confidence 5555544321 1222221 12 999999
Q ss_pred ---eccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEee----------------CCCCCceeEEEecCCCe
Q psy17325 321 ---DLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS----------------TKIYWPNGLTLDIATRR 381 (461)
Q Consensus 321 ---d~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~----------------~~l~~p~glaiD~~~~~ 381 (461)
| ..+.|||+|.. +++|.+.+.+|...++... ..+.+|.||++|+.++.
T Consensus 349 ~~dd-~~g~lyvaD~~------------n~~I~~~~~~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~ 415 (433)
T 4hw6_A 349 AGEE-DEYDFYFCDRD------------SHTVRVLTPEGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKC 415 (433)
T ss_dssp TTSS-CCEEEEEEETT------------TTEEEEECTTSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTE
T ss_pred cccC-CCCcEEEEECC------------CCEEEEECCCCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCE
Confidence 5 57889999888 8899999988844333321 13678999999988999
Q ss_pred EEEEcCCCCeEEEEEe
Q psy17325 382 VYFADSKLDFIDFCNY 397 (461)
Q Consensus 382 ly~~d~~~~~I~~~~~ 397 (461)
||++|..+++|.++++
T Consensus 416 lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 416 FYIGDCDNHRVRKIAP 431 (433)
T ss_dssp EEEEEGGGTEEEEEEE
T ss_pred EEEEeCCCCEEEEEec
Confidence 9999999999999987
No 33
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.80 E-value=5.8e-18 Score=164.37 Aligned_cols=208 Identities=18% Similarity=0.199 Sum_probs=155.7
Q ss_pred CccceeeeeeeecCCeEEEEeCCCCeEEEEeCCCC--cEEEEe--------cCCCCCceeEEEcCCCCceEEEEeecCCC
Q psy17325 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT--NRIVLA--------KDNITQPRGMMLDPSPGTRWLFWTDWGEN 216 (461)
Q Consensus 147 g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~--~~~~l~--------~~~~~~p~~ia~d~~~g~~~ly~td~~~~ 216 (461)
.+..|.+|++|. .++||++|...++|.+.+++|. ....+. ...+..|.+|++||..| .||++|...+
T Consensus 89 ~~~~p~gia~d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g--~lyv~d~~~~ 165 (329)
T 3fvz_A 89 LFYLPHGLSIDT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTG--AVFVSDGYCN 165 (329)
T ss_dssp TCSSEEEEEECT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTC--CEEEEECSSC
T ss_pred ccCCceEEEECC-CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCC--eEEEEeCCCC
Confidence 356899999996 5669999999999999999998 344443 34566899999999778 8999993246
Q ss_pred CcEEEEecCCCCcEEEEe---------cccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEec
Q psy17325 217 PRIERIGMDGSNRSTIIS---------TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDE 287 (461)
Q Consensus 217 ~~I~~~~~dG~~~~~i~~---------~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~ 287 (461)
.+|.+.+.+|.....+.. ..+..|.+|++|+.+++||++|...+
T Consensus 166 ~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~--------------------------- 218 (329)
T 3fvz_A 166 SRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENG--------------------------- 218 (329)
T ss_dssp CEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTT---------------------------
T ss_pred CeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCC---------------------------
Confidence 799999999876665542 23557999999987799999998874
Q ss_pred CCCCcceeeeEEeCC-CCceEEEEeCCe---eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEee-cCCCeEEE
Q psy17325 288 GGNGVPLKIGKANMD-GSNASILVSGQL---YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM-DGSNRSTI 362 (461)
Q Consensus 288 ~~~~~~~~I~~~~~~-g~~~~~l~~~~~---p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~-dG~~~~~l 362 (461)
+|.+.+++ |+....+..... |.++++.| +.+|.++.. +|.++.. ..+|...++ +|+....+
T Consensus 219 -------~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p--g~~~~~~g~----~~v~~~~-~~~v~~~~~~~g~~~~~~ 284 (329)
T 3fvz_A 219 -------RIQCFKTDTKEFVREIKHASFGRNVFAISYIP--GFLFAVNGK----PYFGDQE-PVQGFVMNFSSGEIIDVF 284 (329)
T ss_dssp -------EEEEEETTTCCEEEEECCTTTTTCEEEEEEET--TEEEEEECC----CCTTCSC-CCCEEEEETTTCCEEEEE
T ss_pred -------EEEEEECCCCcEEEEEeccccCCCcceeeecC--CEEEEeCCC----EEeccCC-CcEEEEEEcCCCeEEEEE
Confidence 46777777 666555543222 77777776 666666543 4555443 567877774 45444443
Q ss_pred e--eCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEecC
Q psy17325 363 I--STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG 399 (461)
Q Consensus 363 ~--~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g 399 (461)
. ...+..|.+|++|+ ++.||++|...++|.++++++
T Consensus 285 ~~~~~~~~~p~~ia~~~-dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 285 KPVRKHFDMPHDIVASE-DGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CCSSSCCSSEEEEEECT-TSEEEEEESSSCCEEEEEEEE
T ss_pred cCCCCccCCeeEEEECC-CCCEEEEECCCCEEEEEeCCc
Confidence 2 35788899999995 459999999999999999943
No 34
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.80 E-value=2.1e-17 Score=165.46 Aligned_cols=214 Identities=16% Similarity=0.204 Sum_probs=155.3
Q ss_pred ccceeecccccCcccccceEEEcCccceeeeeeeecCCeEEEEeCCCC-eEEEEeCCCCcEEEEe----cCCCCCceeEE
Q psy17325 124 HSILVADLEEKGKDHRAQDIVVSGLDLVEGLAYDWIGGHIYWLDSRLN-RIEVCDENGTNRIVLA----KDNITQPRGMM 198 (461)
Q Consensus 124 ~~I~~~~l~~~~~~~s~~~~~~~g~~~p~~iavd~~~~~ly~~d~~~~-~I~~~~~~G~~~~~l~----~~~~~~p~~ia 198 (461)
+.|+++++++... ..+......|. +++++.++.|||++...+ +|.+.+.++......+ ......|.++|
T Consensus 152 ~~I~~id~~~g~~-----~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~ia 225 (409)
T 3hrp_A 152 PRVRLISVDDNKV-----TTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVA 225 (409)
T ss_dssp TEEEEEETTTTEE-----EEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCE
T ss_pred CcEEEEECCCCEE-----EEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEE
Confidence 4566665543221 11233355677 999999999999998665 9999998876643333 32457799999
Q ss_pred EcCCCCceEEEEeecCCCCcEEEEecCCCCcEEE----Eeccc-ccce-eEEeeccCCeeEEecCCCceeeecccceeee
Q psy17325 199 LDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI----ISTKI-YWPN-GLTLDIATRRVYFADSKLDFIDCKSLEIKTN 272 (461)
Q Consensus 199 ~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i----~~~~~-~~P~-glavD~~~~~ly~~d~~~~~i~~~~~~~~~~ 272 (461)
+||..| .||+++. ..+|++.++++.....+ ..... ..|. +|++|+..++||++|....
T Consensus 226 v~p~~g--~lyv~d~--~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~------------ 289 (409)
T 3hrp_A 226 LDETEE--WLYFVDS--NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLS------------ 289 (409)
T ss_dssp ECTTSS--EEEEECT--TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTT------------
T ss_pred EeCCCC--eEEEEEC--CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCC------------
Confidence 999888 9999883 56899999987665444 11111 2356 9999998899999998874
Q ss_pred eccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCC--------------e--eeeEEEeccCCeEEEeec-Cce
Q psy17325 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ--------------L--YEALALDLENGMLYYSTL-KCT 335 (461)
Q Consensus 273 v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~--------------~--p~~iavd~~~~~lY~t~~-~~~ 335 (461)
+|.+.+++|.. .++.... + |.+|++|+. |+||++|. .
T Consensus 290 ----------------------~I~~~~~~g~~-~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~d-G~lyvad~~~-- 343 (409)
T 3hrp_A 290 ----------------------SVYKITPDGEC-EWFCGSATQKTVQDGLREEALFAQPNGMTVDED-GNFYIVDGFK-- 343 (409)
T ss_dssp ----------------------EEEEECTTCCE-EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTT-CCEEEEETTT--
T ss_pred ----------------------EEEEEecCCCE-EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCC-CCEEEEeCCC--
Confidence 57777888773 3333322 3 999999986 55999988 7
Q ss_pred eeEEEeecCCCCceEEEe-ecCCCeEEEeeC--------------CCCCceeEEEecCCCeEEEEcCCCCeEEEEEe
Q psy17325 336 RWLFWTDWGENPRIERIG-MDGSNRSTIIST--------------KIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397 (461)
Q Consensus 336 ~~l~~~d~~~~~~I~~~~-~dG~~~~~l~~~--------------~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~ 397 (461)
+++|.+.+ .+|. ...+... .+.+|.||++|+. ++||++|...++|.++.+
T Consensus 344 ----------~~~I~~~~~~~G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~-g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 344 ----------GYCLRKLDILDGY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGE-GGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp ----------TCEEEEEETTTTE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSS-SEEEEEESTTCEEEEEEE
T ss_pred ----------CCEEEEEECCCCE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCC-CCEEEEECCCCeEEEEEe
Confidence 88899998 4554 3333322 2788999999965 999999999999999987
No 35
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.78 E-value=7.6e-17 Score=162.63 Aligned_cols=220 Identities=15% Similarity=0.196 Sum_probs=155.2
Q ss_pred ccceeecccccCcccccceEEEc---Cccceeeeee-------eecCCeEEEEeCCCC------eEEEEeCC--CCcE--
Q psy17325 124 HSILVADLEEKGKDHRAQDIVVS---GLDLVEGLAY-------DWIGGHIYWLDSRLN------RIEVCDEN--GTNR-- 183 (461)
Q Consensus 124 ~~I~~~~l~~~~~~~s~~~~~~~---g~~~p~~iav-------d~~~~~ly~~d~~~~------~I~~~~~~--G~~~-- 183 (461)
+.|++++++..... .+... ++..|.+|++ |..++.||++|...+ .|.+++.+ |...
T Consensus 162 ~~i~~ID~~~~~v~----~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~ 237 (496)
T 3kya_A 162 KAIQLIDLKNRMLS----SPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDR 237 (496)
T ss_dssp EEEEEEETTTTEEE----EEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTT
T ss_pred CeEEEEECCCCEEE----EEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeec
Confidence 45667766543221 12212 4567999999 988888999999863 37777533 4543
Q ss_pred ---EEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecC--------CCC-----------cEEEEe-cccccc
Q psy17325 184 ---IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD--------GSN-----------RSTIIS-TKIYWP 240 (461)
Q Consensus 184 ---~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~d--------G~~-----------~~~i~~-~~~~~P 240 (461)
..+. .+.+|.++++||..+ .||++++ .+.+|++.+++ |.. ...+.. ....+|
T Consensus 238 ~~~~~v~--~~~~p~giavdp~~g--~LYvtd~-~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p 312 (496)
T 3kya_A 238 SDIQLIA--AYKQCNGATIHPING--ELYFNSY-EKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWE 312 (496)
T ss_dssp SCEEEEE--EESCCCCEEECTTTC--CEEEEET-TTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCC
T ss_pred ccceeec--cCCCceEEEEcCCCC--eEEEEEC-CCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCc
Confidence 2332 346899999999888 9999995 45689999997 332 123332 234679
Q ss_pred eeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCce-----EEEEeC---
Q psy17325 241 NGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA-----SILVSG--- 312 (461)
Q Consensus 241 ~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~-----~~l~~~--- 312 (461)
.+|++|+.++.||++|....+ |.+.++++... .++...
T Consensus 313 ~~ia~~p~G~~lYvaD~~~h~----------------------------------I~kid~dg~~~~~~~~~~~aG~~g~ 358 (496)
T 3kya_A 313 FQIFIHPTGKYAYFGVINNHY----------------------------------FMRSDYDEIKKEFITPYNFVGGYKQ 358 (496)
T ss_dssp EEEEECTTSSEEEEEETTTTE----------------------------------EEEEEEETTTTEECCCEEEEEBTTB
T ss_pred eEEEEcCCCCEEEEEeCCCCE----------------------------------EEEEecCCCcceecccEEecCCCCC
Confidence 999999988889999998854 55555555431 222221
Q ss_pred -----------Ce--ee-eEEEec------cCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEee--------
Q psy17325 313 -----------QL--YE-ALALDL------ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS-------- 364 (461)
Q Consensus 313 -----------~~--p~-~iavd~------~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~-------- 364 (461)
.+ |. ++++|. ..+.||++|.. +++|++.+.+|.-.++.-.
T Consensus 359 ~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~------------N~rIr~i~~~G~v~TiaG~g~~~~~~~ 426 (496)
T 3kya_A 359 SGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRL------------NFCVRKVTPEGIVSTYAGRGASTSLAD 426 (496)
T ss_dssp CCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGG------------GTEEEEECTTCBEEEEEESCTTHHHHH
T ss_pred CcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECC------------CCEEEEEeCCCCEEEEecccccccccC
Confidence 12 99 788873 57899999988 8999999988843333221
Q ss_pred --------------CCCCCceeEEEecCCCeEEEEcCCCCeEEEEEec
Q psy17325 365 --------------TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398 (461)
Q Consensus 365 --------------~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~ 398 (461)
..|.+|.||++|..++.||++|..+++|++++++
T Consensus 427 ~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~ 474 (496)
T 3kya_A 427 GNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISME 474 (496)
T ss_dssp SCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred ccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECC
Confidence 1367899999997679999999999999999993
No 36
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.78 E-value=3.5e-16 Score=149.43 Aligned_cols=245 Identities=12% Similarity=0.109 Sum_probs=168.3
Q ss_pred eEEEcCccceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEE
Q psy17325 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIER 221 (461)
Q Consensus 142 ~~~~~g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~ 221 (461)
.++..+...+||+++++..+.|||+|...++|.+.++++.....+... ..|.+|++++. | .||++. ...|.+
T Consensus 6 ~~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~--~~~~~i~~~~d-G--~l~v~~---~~~l~~ 77 (297)
T 3g4e_A 6 CVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMD--APVSSVALRQS-G--GYVATI---GTKFCA 77 (297)
T ss_dssp EEECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECS--SCEEEEEEBTT-S--SEEEEE---TTEEEE
T ss_pred EEeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeCC--CceEEEEECCC-C--CEEEEE---CCeEEE
Confidence 345667788999999988999999999999999999987765544332 46999999986 4 477765 358999
Q ss_pred EecCCCCcEEEEec----ccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeee
Q psy17325 222 IGMDGSNRSTIIST----KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297 (461)
Q Consensus 222 ~~~dG~~~~~i~~~----~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~ 297 (461)
.+.++...+.+... ....|+++++|+ .++||+++......... .+.. .+.|+
T Consensus 78 ~d~~~g~~~~~~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~-------------------~~~~----~~~l~ 133 (297)
T 3g4e_A 78 LNWKEQSAVVLATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPAV-------------------LERH----QGALY 133 (297)
T ss_dssp EETTTTEEEEEEECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTTB-------------------CCTT----CEEEE
T ss_pred EECCCCcEEEEEecCCCCCCCCCCCEEECC-CCCEEEecCCccccccc-------------------ccCC----CcEEE
Confidence 99876555555432 235689999997 56788876432110000 0000 04688
Q ss_pred EEeCCCCceEEEEeCCeeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeec---CC--CeEEEee--CCCCCc
Q psy17325 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD---GS--NRSTIIS--TKIYWP 370 (461)
Q Consensus 298 ~~~~~g~~~~~l~~~~~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~d---G~--~~~~l~~--~~l~~p 370 (461)
+.+.+|....+.-....|++|+++|.++.|||+++. .++|++.+++ |. +++++.. .....|
T Consensus 134 ~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~------------~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p 201 (297)
T 3g4e_A 134 SLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSL------------SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIP 201 (297)
T ss_dssp EECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGG------------GTEEEEEEECTTTCCEEEEEEEEECCGGGCEE
T ss_pred EEECCCCEEEEeeccccccceEEcCCCCEEEEecCC------------CCcEEEEeccCCCCcccCcEEEEECCCCCCCC
Confidence 888877544433222229999999999999999887 6788888764 32 2334432 224579
Q ss_pred eeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEee---eCCEEEEEeCCCc
Q psy17325 371 NGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDL---ENGMLYYSTEGAE 444 (461)
Q Consensus 371 ~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~lYwtd~~~~ 444 (461)
.||++| .+++||+++...++|.+++.+ +|.....+..... .|..+++ +.+.||+|....+
T Consensus 202 ~g~~~d-~~G~lwva~~~~~~v~~~d~~-tG~~~~~i~~p~~------------~~t~~~f~g~d~~~L~vt~~~~~ 264 (297)
T 3g4e_A 202 DGMCID-AEGKLWVACYNGGRVIRLDPV-TGKRLQTVKLPVD------------KTTSCCFGGKNYSEMYVTCARDG 264 (297)
T ss_dssp EEEEEB-TTSCEEEEEETTTEEEEECTT-TCCEEEEEECSSS------------BEEEEEEESGGGCEEEEEEBCTT
T ss_pred CeeEEC-CCCCEEEEEcCCCEEEEEcCC-CceEEEEEECCCC------------CceEEEEeCCCCCEEEEEcCCcC
Confidence 999999 567999999988999999983 3766544432211 1455555 3469999997654
No 37
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.77 E-value=2.6e-16 Score=149.24 Aligned_cols=236 Identities=17% Similarity=0.232 Sum_probs=170.3
Q ss_pred CccceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCC
Q psy17325 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226 (461)
Q Consensus 147 g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG 226 (461)
+...|.+|++|. .++||+++...+.|.+.+++|......+......|.+|++|+. | .||+++ .....|.+.+.+|
T Consensus 18 ~~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-g--~l~v~~-~~~~~v~~~d~~g 92 (300)
T 2qc5_A 18 PDSGPYGITSSE-DGKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVMCLIVSSL-G--DIWFTE-NGANKIGKLSKKG 92 (300)
T ss_dssp TTCCEEEEEECT-TSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTT-S--CEEEEE-TTTTEEEEECTTS
T ss_pred CCCCcceeeECC-CCCEEEEcCCCCeEEEECCCCceEEEECCCCCCcceeEEECCC-C--CEEEEe-cCCCeEEEECCCC
Confidence 456899999996 5789999998999999999866655444444578999999975 5 699998 4456899999886
Q ss_pred CCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCce
Q psy17325 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306 (461)
Q Consensus 227 ~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~ 306 (461)
.............|.+|++|. .++||+++...+ .|.+.+++|+..
T Consensus 93 ~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~----------------------------------~i~~~~~~g~~~ 137 (300)
T 2qc5_A 93 GFTEYPLPQPDSGPYGITEGL-NGDIWFTQLNGD----------------------------------RIGKLTADGTIY 137 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECS-TTCEEEEETTTT----------------------------------EEEEECTTSCEE
T ss_pred CeEEecCCCCCCCCccceECC-CCCEEEEccCCC----------------------------------eEEEECCCCCEE
Confidence 543222222346799999995 678999987553 467777775544
Q ss_pred EEEEeCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEE
Q psy17325 307 SILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384 (461)
Q Consensus 307 ~~l~~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~ 384 (461)
........ |.+|++|+. ++||+++.. .+.|.+.+.+|+.........+..|.+|++|+ +++||+
T Consensus 138 ~~~~~~~~~~~~~i~~d~~-g~l~v~~~~------------~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~-~g~l~v 203 (300)
T 2qc5_A 138 EYDLPNKGSYPAFITLGSD-NALWFTENQ------------NNSIGRITNTGKLEEYPLPTNAAAPVGITSGN-DGALWF 203 (300)
T ss_dssp EEECSSTTCCEEEEEECTT-SSEEEEETT------------TTEEEEECTTCCEEEEECSSTTCCEEEEEECT-TSSEEE
T ss_pred EccCCCCCCCceeEEECCC-CCEEEEecC------------CCeEEEECCCCcEEEeeCCCCCCCcceEEECC-CCCEEE
Confidence 33222222 999999974 559998876 67888888877655433334577899999994 679999
Q ss_pred EcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeee-CCEEEEEeCCCcee-ecc
Q psy17325 385 ADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLE-NGMLYYSTEGAEFL-KTP 449 (461)
Q Consensus 385 ~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~lYwtd~~~~~i-~~~ 449 (461)
++...+.|.+++. +|........ .. ...|.+|+++ ++.||+++..++.| ++.
T Consensus 204 ~~~~~~~i~~~~~--~g~~~~~~~~--~~---------~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 257 (300)
T 2qc5_A 204 VEIMGNKIGRITT--TGEISEYDIP--TP---------NARPHAITAGKNSEIWFTEWGANQIGRIT 257 (300)
T ss_dssp EETTTTEEEEECT--TCCEEEEECS--ST---------TCCEEEEEECSTTCEEEEETTTTEEEEEC
T ss_pred EccCCCEEEEEcC--CCcEEEEECC--CC---------CCCceEEEECCCCCEEEeccCCCeEEEEC
Confidence 9999999999998 6665433221 11 1236778776 57899999887655 443
No 38
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.77 E-value=1.3e-16 Score=153.14 Aligned_cols=225 Identities=17% Similarity=0.209 Sum_probs=155.4
Q ss_pred cceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCC-CcEEEEecCCC
Q psy17325 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN-PRIERIGMDGS 227 (461)
Q Consensus 149 ~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~-~~I~~~~~dG~ 227 (461)
..|+++++|. .++|||+|...++|.+++++|.....+... ..|.+|++++. | .||+++.+.+ .+|.+.+....
T Consensus 32 ~~pegia~~~-~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~--~~p~gia~~~d-G--~l~vad~~~~~~~v~~~d~~~g 105 (306)
T 2p4o_A 32 TFLENLASAP-DGTIFVTNHEVGEIVSITPDGNQQIHATVE--GKVSGLAFTSN-G--DLVATGWNADSIPVVSLVKSDG 105 (306)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTTCCEEEEEECS--SEEEEEEECTT-S--CEEEEEECTTSCEEEEEECTTS
T ss_pred CCcceEEECC-CCCEEEEeCCCCeEEEECCCCceEEEEeCC--CCceeEEEcCC-C--cEEEEeccCCcceEEEEcCCCC
Confidence 5799999997 678999999999999999999755443322 46999999987 5 5999996543 35888765433
Q ss_pred CcEEEEe-cccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCce
Q psy17325 228 NRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306 (461)
Q Consensus 228 ~~~~i~~-~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~ 306 (461)
..+.+.. .....|.|++++ ..+++|++|...+ .|++.+.++...
T Consensus 106 ~~~~~~~~~~~~~~~g~~~~-~~~~~~v~d~~~g----------------------------------~i~~~d~~~~~~ 150 (306)
T 2p4o_A 106 TVETLLTLPDAIFLNGITPL-SDTQYLTADSYRG----------------------------------AIWLIDVVQPSG 150 (306)
T ss_dssp CEEEEEECTTCSCEEEEEES-SSSEEEEEETTTT----------------------------------EEEEEETTTTEE
T ss_pred eEEEEEeCCCccccCccccc-CCCcEEEEECCCC----------------------------------eEEEEeCCCCcE
Confidence 3344433 245568899875 5778999987653 344444443211
Q ss_pred EEE----------EeCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecC--C--CeEEEeeCCCCCc
Q psy17325 307 SIL----------VSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG--S--NRSTIISTKIYWP 370 (461)
Q Consensus 307 ~~l----------~~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG--~--~~~~l~~~~l~~p 370 (461)
++. ....+ |+|| ++.++.||+++.. +++|.++++++ + .++++. .+..|
T Consensus 151 ~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~------------~~~I~~~~~~~~g~~~~~~~~~--~~~~P 214 (306)
T 2p4o_A 151 SIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTE------------KMLLLRIPVDSTDKPGEPEIFV--EQTNI 214 (306)
T ss_dssp EEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETT------------TTEEEEEEBCTTSCBCCCEEEE--ESCCC
T ss_pred eEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCC------------CCEEEEEEeCCCCCCCccEEEe--ccCCC
Confidence 111 01122 8998 6668899999888 88999999875 2 233333 24689
Q ss_pred eeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeee-----CCEEEEEeCCC
Q psy17325 371 NGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLE-----NGMLYYSTEGA 443 (461)
Q Consensus 371 ~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~lYwtd~~~ 443 (461)
.||++| .+|+||+++...++|.+++. +|....+ .....+. ..|.++++. ++.||+|+..+
T Consensus 215 ~gi~vd-~dG~l~va~~~~~~V~~~~~--~G~~~~~-~~~~~~~---------~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 215 DDFAFD-VEGNLYGATHIYNSVVRIAP--DRSTTII-AQAEQGV---------IGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp SSEEEB-TTCCEEEECBTTCCEEEECT--TCCEEEE-ECGGGTC---------TTEEEEEECCSTTTTTEEEEEECTT
T ss_pred CCeEEC-CCCCEEEEeCCCCeEEEECC--CCCEEEE-eeccccc---------CCceEEEEecccCCCCEEEEECCCC
Confidence 999999 56799999999999999998 6765322 2211111 236677653 47999999865
No 39
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.76 E-value=3.5e-16 Score=148.27 Aligned_cols=234 Identities=17% Similarity=0.229 Sum_probs=167.5
Q ss_pred CccceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCC
Q psy17325 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226 (461)
Q Consensus 147 g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG 226 (461)
++..|.+|++| ..+++|+++...++|.+.+.+|.............|.+|++|+. | .||+++ .....|.+.+.+|
T Consensus 60 ~~~~~~~i~~~-~~g~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~~-g--~l~v~~-~~~~~i~~~~~~g 134 (300)
T 2qc5_A 60 PDAKVMCLIVS-SLGDIWFTENGANKIGKLSKKGGFTEYPLPQPDSGPYGITEGLN-G--DIWFTQ-LNGDRIGKLTADG 134 (300)
T ss_dssp TTCCEEEEEEC-TTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECST-T--CEEEEE-TTTTEEEEECTTS
T ss_pred CCCcceeEEEC-CCCCEEEEecCCCeEEEECCCCCeEEecCCCCCCCCccceECCC-C--CEEEEc-cCCCeEEEECCCC
Confidence 45679999999 46789999998999999999977654444434467999999975 6 699998 4456899999986
Q ss_pred CCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCce
Q psy17325 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306 (461)
Q Consensus 227 ~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~ 306 (461)
.............|.+|++|+ .++||+++.... .|.+.+.+|+..
T Consensus 135 ~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~----------------------------------~i~~~~~~g~~~ 179 (300)
T 2qc5_A 135 TIYEYDLPNKGSYPAFITLGS-DNALWFTENQNN----------------------------------SIGRITNTGKLE 179 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECT-TSSEEEEETTTT----------------------------------EEEEECTTCCEE
T ss_pred CEEEccCCCCCCCceeEEECC-CCCEEEEecCCC----------------------------------eEEEECCCCcEE
Confidence 544322333456899999997 456999987653 467777766654
Q ss_pred EEEEeCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEE
Q psy17325 307 SILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384 (461)
Q Consensus 307 ~~l~~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~ 384 (461)
........ |.+|++|+ .|.||+++.. .+.|.+.+.+|.............|.+|++| .+++||+
T Consensus 180 ~~~~~~~~~~~~~i~~d~-~g~l~v~~~~------------~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d-~~g~l~v 245 (300)
T 2qc5_A 180 EYPLPTNAAAPVGITSGN-DGALWFVEIM------------GNKIGRITTTGEISEYDIPTPNARPHAITAG-KNSEIWF 245 (300)
T ss_dssp EEECSSTTCCEEEEEECT-TSSEEEEETT------------TTEEEEECTTCCEEEEECSSTTCCEEEEEEC-STTCEEE
T ss_pred EeeCCCCCCCcceEEECC-CCCEEEEccC------------CCEEEEEcCCCcEEEEECCCCCCCceEEEEC-CCCCEEE
Confidence 43222222 99999997 5789998876 6688888887765554343467889999999 4578999
Q ss_pred EcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeee-CCEEEEEeCCCceeec
Q psy17325 385 ADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLE-NGMLYYSTEGAEFLKT 448 (461)
Q Consensus 385 ~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~lYwtd~~~~~i~~ 448 (461)
++...+.|.+++. +|........ ... ..|.+|+++ ++.||+++. ++..++
T Consensus 246 ~~~~~~~i~~~~~--~g~~~~~~~~--~~~---------~~~~~i~~~~~g~l~v~~~-~~i~~~ 296 (300)
T 2qc5_A 246 TEWGANQIGRITN--DNTIQEYQLQ--TEN---------AEPHGITFGKDGSVWFALK-CKIGKL 296 (300)
T ss_dssp EETTTTEEEEECT--TSCEEEEECC--STT---------CCCCCEEECTTSCEEEECS-SEEEEE
T ss_pred eccCCCeEEEECC--CCcEEEEECC--ccC---------CccceeEeCCCCCEEEEcc-CceEEe
Confidence 9998899999998 6654322111 011 125677765 578999998 444343
No 40
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.74 E-value=2.3e-15 Score=142.49 Aligned_cols=234 Identities=18% Similarity=0.256 Sum_probs=165.4
Q ss_pred ccceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCC
Q psy17325 148 LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227 (461)
Q Consensus 148 ~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~ 227 (461)
...|.++++|. .+++|+++...+.|.+.+++|......+......|.+|++|+. | .||+++ .....|.+.+.+|.
T Consensus 56 ~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~-g--~l~v~~-~~~~~i~~~d~~g~ 130 (299)
T 2z2n_A 56 DAKVMCLTISS-DGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPN-G--DIWFTE-MNGNRIGRITDDGK 130 (299)
T ss_dssp TCCEEEEEECT-TSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTT-S--CEEEEE-TTTTEEEEECTTCC
T ss_pred cCceeeEEECC-CCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCC-C--CEEEEe-cCCceEEEECCCCC
Confidence 45799999995 6789999998899999999877644443334567999999985 5 699998 44568999988765
Q ss_pred CcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceE
Q psy17325 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307 (461)
Q Consensus 228 ~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~ 307 (461)
............|.+|++|. .++||+++.... .|.+.+++|+...
T Consensus 131 ~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~----------------------------------~i~~~~~~g~~~~ 175 (299)
T 2z2n_A 131 IREYELPNKGSYPSFITLGS-DNALWFTENQNN----------------------------------AIGRITESGDITE 175 (299)
T ss_dssp EEEEECSSTTCCEEEEEECT-TSCEEEEETTTT----------------------------------EEEEECTTCCEEE
T ss_pred EEEecCCCCCCCCceEEEcC-CCCEEEEeCCCC----------------------------------EEEEEcCCCcEEE
Confidence 44333333456799999996 568999887553 4666666554433
Q ss_pred EEEeCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEE
Q psy17325 308 ILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385 (461)
Q Consensus 308 ~l~~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~ 385 (461)
....... |.+|++|+. |.||+++.. .+.|.+.+.+|.............|.+|++| .+++||++
T Consensus 176 ~~~~~~~~~~~~i~~~~~-g~l~v~~~~------------~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~-~~g~l~v~ 241 (299)
T 2z2n_A 176 FKIPTPASGPVGITKGND-DALWFVEII------------GNKIGRITTSGEITEFKIPTPNARPHAITAG-AGIDLWFT 241 (299)
T ss_dssp EECSSTTCCEEEEEECTT-SSEEEEETT------------TTEEEEECTTCCEEEEECSSTTCCEEEEEEC-STTCEEEE
T ss_pred eeCCCCCCcceeEEECCC-CCEEEEccC------------CceEEEECCCCcEEEEECCCCCCCceeEEEC-CCCCEEEe
Confidence 3222222 999999975 678988765 6688888886654332233456789999999 45789999
Q ss_pred cCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeCCCceeec
Q psy17325 386 DSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKT 448 (461)
Q Consensus 386 d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~~~~~i~~ 448 (461)
+...+.|.+++. +|........ ... ..|.++++.++.||+++...+.+++
T Consensus 242 ~~~~~~i~~~d~--~g~~~~~~~~--~~~---------~~~~~i~~~~g~l~v~~~~~~l~~~ 291 (299)
T 2z2n_A 242 EWGANKIGRLTS--NNIIEEYPIQ--IKS---------AEPHGICFDGETIWFAMECDKIGKL 291 (299)
T ss_dssp ETTTTEEEEEET--TTEEEEEECS--SSS---------CCEEEEEECSSCEEEEETTTEEEEE
T ss_pred ccCCceEEEECC--CCceEEEeCC--CCC---------CccceEEecCCCEEEEecCCcEEEE
Confidence 988899999998 5643322111 111 1256676677899999876565555
No 41
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.74 E-value=1.3e-16 Score=149.29 Aligned_cols=197 Identities=23% Similarity=0.353 Sum_probs=150.1
Q ss_pred cCccceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecC
Q psy17325 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD 225 (461)
Q Consensus 146 ~g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~d 225 (461)
.++..|.+|++|+ .++||+++. .+.|.+.+++|.....+....+..|.+|++|+. | .||+++. ....|.+.+..
T Consensus 64 ~~~~~p~~i~~~~-~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~-g--~l~v~~~-~~~~i~~~~~~ 137 (270)
T 1rwi_B 64 NGLYQPQGLAVDG-AGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQ-G--AVYVADR-GNNRVVKLAAG 137 (270)
T ss_dssp CSCCSCCCEEECT-TCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTT-C--CEEEEEG-GGTEEEEECTT
T ss_pred CCcCCcceeEECC-CCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCC-C--CEEEEEC-CCCEEEEEECC
Confidence 3556899999997 466999999 889999999998766554455578999999985 6 6999984 44688888544
Q ss_pred CCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCc
Q psy17325 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305 (461)
Q Consensus 226 G~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~ 305 (461)
...........+..|.+|++|+ .++||+++...+ .|.+.++++..
T Consensus 138 ~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~----------------------------------~i~~~~~~~~~ 182 (270)
T 1rwi_B 138 SKTQTVLPFTGLNDPDGVAVDN-SGNVYVTDTDNN----------------------------------RVVKLEAESNN 182 (270)
T ss_dssp CCSCEECCCCSCCSCCCEEECT-TCCEEEEEGGGT----------------------------------EEEEECTTTCC
T ss_pred CceeEeeccccCCCceeEEEeC-CCCEEEEECCCC----------------------------------EEEEEecCCCc
Confidence 3333322333456899999997 557999987653 47777777765
Q ss_pred eEEEEeCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEE
Q psy17325 306 ASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 383 (461)
Q Consensus 306 ~~~l~~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly 383 (461)
........+ |.+|++|+. |+||+++.. +++|.+.+.+|.....+....+..|.+|++|+ +++||
T Consensus 183 ~~~~~~~~~~~p~~i~~d~~-g~l~v~~~~------------~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~ 248 (270)
T 1rwi_B 183 QVVLPFTDITAPWGIAVDEA-GTVYVTEHN------------TNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDS-DRTVY 248 (270)
T ss_dssp EEECCCSSCCSEEEEEECTT-CCEEEEETT------------TSCEEEECTTCSCCEECCCCSCSCEEEEEECT-TCCEE
T ss_pred eEeecccCCCCceEEEECCC-CCEEEEECC------------CCcEEEEcCCCCcceeeccCCCCCceeEEECC-CCCEE
Confidence 544333333 999999975 589998876 77899999988766554445678899999995 56899
Q ss_pred EEcCCCCeEEEEEe
Q psy17325 384 FADSKLDFIDFCNY 397 (461)
Q Consensus 384 ~~d~~~~~I~~~~~ 397 (461)
+++...++|..+++
T Consensus 249 v~~~~~~~v~~~~~ 262 (270)
T 1rwi_B 249 VADRGNDRVVKLTS 262 (270)
T ss_dssp EEEGGGTEEEEECC
T ss_pred EEECCCCEEEEEcC
Confidence 99999999999998
No 42
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.73 E-value=3.2e-15 Score=141.58 Aligned_cols=233 Identities=17% Similarity=0.194 Sum_probs=165.4
Q ss_pred CccceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCC
Q psy17325 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226 (461)
Q Consensus 147 g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG 226 (461)
....|.+|++|. .++||+++...+.|.+.+++|.............|.+|++|+. | .||+++ .....|.+.+.+|
T Consensus 13 ~~~~~~~i~~d~-~g~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~~~-g--~l~v~~-~~~~~i~~~~~~g 87 (299)
T 2z2n_A 13 QDTGPYGITVSD-KGKVWITQHKANMISCINLDGKITEYPLPTPDAKVMCLTISSD-G--EVWFTE-NAANKIGRITKKG 87 (299)
T ss_dssp SSCCEEEEEECT-TSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTT-S--CEEEEE-TTTTEEEEECTTS
T ss_pred cCCCccceEECC-CCCEEEEecCCCcEEEEcCCCCeEEecCCcccCceeeEEECCC-C--CEEEeC-CCCCeEEEECCCC
Confidence 345799999995 6789999998899999999966544443334467999999985 5 699998 4456899999886
Q ss_pred CCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCce
Q psy17325 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306 (461)
Q Consensus 227 ~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~ 306 (461)
.............|.+|++|+ .++||+++...+ .|.+.+++|+..
T Consensus 88 ~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~----------------------------------~i~~~d~~g~~~ 132 (299)
T 2z2n_A 88 IIKEYTLPNPDSAPYGITEGP-NGDIWFTEMNGN----------------------------------RIGRITDDGKIR 132 (299)
T ss_dssp CEEEEECSSTTCCEEEEEECT-TSCEEEEETTTT----------------------------------EEEEECTTCCEE
T ss_pred cEEEEeCCCcCCCceeeEECC-CCCEEEEecCCc----------------------------------eEEEECCCCCEE
Confidence 532222222456899999996 678999886653 466777766544
Q ss_pred EEEEeCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEE
Q psy17325 307 SILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384 (461)
Q Consensus 307 ~~l~~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~ 384 (461)
........ |.+|++|+ .|.||+++.. .+.|.+.+.+|+............|.+|++|+ +++||+
T Consensus 133 ~~~~~~~~~~~~~i~~~~-~g~l~v~~~~------------~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v 198 (299)
T 2z2n_A 133 EYELPNKGSYPSFITLGS-DNALWFTENQ------------NNAIGRITESGDITEFKIPTPASGPVGITKGN-DDALWF 198 (299)
T ss_dssp EEECSSTTCCEEEEEECT-TSCEEEEETT------------TTEEEEECTTCCEEEEECSSTTCCEEEEEECT-TSSEEE
T ss_pred EecCCCCCCCCceEEEcC-CCCEEEEeCC------------CCEEEEEcCCCcEEEeeCCCCCCcceeEEECC-CCCEEE
Confidence 43332222 99999997 4688888765 66788888866544432334577899999994 588999
Q ss_pred EcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeee-CCEEEEEeCCCcee
Q psy17325 385 ADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLE-NGMLYYSTEGAEFL 446 (461)
Q Consensus 385 ~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~lYwtd~~~~~i 446 (461)
++...+.|.+++. +|........ . . ...|.+|+++ ++.||+++..++.|
T Consensus 199 ~~~~~~~i~~~~~--~g~~~~~~~~-~-~---------~~~~~~i~~~~~g~l~v~~~~~~~i 248 (299)
T 2z2n_A 199 VEIIGNKIGRITT--SGEITEFKIP-T-P---------NARPHAITAGAGIDLWFTEWGANKI 248 (299)
T ss_dssp EETTTTEEEEECT--TCCEEEEECS-S-T---------TCCEEEEEECSTTCEEEEETTTTEE
T ss_pred EccCCceEEEECC--CCcEEEEECC-C-C---------CCCceeEEECCCCCEEEeccCCceE
Confidence 9998899999998 6665332111 0 1 1236777776 57899999777655
No 43
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.73 E-value=4.9e-15 Score=142.00 Aligned_cols=253 Identities=16% Similarity=0.135 Sum_probs=163.8
Q ss_pred eEEEcCccceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEE
Q psy17325 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIER 221 (461)
Q Consensus 142 ~~~~~g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~ 221 (461)
..+..++..++|+++++.++.|||+|...++|.+.+.+|.... +.. ....|.++++|+. | .||+++ ....+|.+
T Consensus 38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~-~~~-~~~~~~gl~~d~d-G--~l~v~~-~~~~~v~~ 111 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVDV-LLD-ATAFTNGNAVDAQ-Q--RLVHCE-HGRRAITR 111 (305)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCEEE-EEE-SCSCEEEEEECTT-S--CEEEEE-TTTTEEEE
T ss_pred EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCEEE-EeC-CCCccceeeECCC-C--CEEEEE-CCCCEEEE
Confidence 3467788999999999988889999999999999999877433 322 2256999999986 5 699988 44468999
Q ss_pred EecCCCCcEEEEec----ccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeee
Q psy17325 222 IGMDGSNRSTIIST----KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297 (461)
Q Consensus 222 ~~~dG~~~~~i~~~----~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~ 297 (461)
.+.+|+. +.+... .+..|++|++|+ .++||++|..........+.. ..... -...|+
T Consensus 112 ~~~~g~~-~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~---------------~~~~~--~~~~v~ 172 (305)
T 3dr2_A 112 SDADGQA-HLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCP---------------ADPEL--AHHSVY 172 (305)
T ss_dssp ECTTSCE-EEEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCC---------------CCCSS--SCEEEE
T ss_pred ECCCCCE-EEEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccc---------------ccccc--CCCeEE
Confidence 9998763 333321 245689999997 678999885321100000000 00000 003578
Q ss_pred EEeCCCCceEEEEeCCeeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCC---eEEEeeCCCCCceeEE
Q psy17325 298 KANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSN---RSTIISTKIYWPNGLT 374 (461)
Q Consensus 298 ~~~~~g~~~~~l~~~~~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~---~~~l~~~~l~~p~gla 374 (461)
+.++++...+.+.....|++|+++|.++.|||++... ..+...+|++.++++.. .+++.......|.||+
T Consensus 173 ~~d~~~g~~~~~~~~~~p~gl~~spdg~~lyv~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~ 245 (305)
T 3dr2_A 173 RLPPDGSPLQRMADLDHPNGLAFSPDEQTLYVSQTPE-------QGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFC 245 (305)
T ss_dssp EECSSSCCCEEEEEESSEEEEEECTTSSEEEEEECCC----------CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEE
T ss_pred EEcCCCCcEEEEecCCCCcceEEcCCCCEEEEEecCC-------cCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEE
Confidence 8887543333333222299999999988899887650 00012678888887632 3344434456799999
Q ss_pred EecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeCC
Q psy17325 375 LDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442 (461)
Q Consensus 375 iD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~~ 442 (461)
+| .+++||++. .+.|.+++. +|.....+.... .. ..+++..+++.||++..+
T Consensus 246 ~d-~~G~lwv~~--~~gv~~~~~--~g~~~~~~~~~~-~~----------~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 246 VD-RGGWLWSSS--GTGVCVFDS--DGQLLGHIPTPG-TA----------SNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp EC-TTSCEEECC--SSEEEEECT--TSCEEEEEECSS-CC----------CEEEECTTSCEEEEEETT
T ss_pred EC-CCCCEEEec--CCcEEEECC--CCCEEEEEECCC-ce----------eEEEEeCCCCEEEEEcCC
Confidence 99 667788887 356999998 677654443221 11 134444456789998753
No 44
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.72 E-value=9.1e-15 Score=139.16 Aligned_cols=251 Identities=18% Similarity=0.195 Sum_probs=164.6
Q ss_pred eEEEcCccceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEE
Q psy17325 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIER 221 (461)
Q Consensus 142 ~~~~~g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~ 221 (461)
..+..++..|+++++|+.++.|||++...++|.+.++++. .+.+.. ....|.+|++|+. | .||+++ .....|.+
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~-~~~~~~~l~~~~d-g--~l~v~~-~~~~~i~~ 94 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMH-PSHHQNGHCLNKQ-G--HLIACS-HGLRRLER 94 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEES-SCSSEEEEEECTT-C--CEEEEE-TTTTEEEE
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEEC-CCCCcceeeECCC-C--cEEEEe-cCCCeEEE
Confidence 3466778899999999888789999999999999999988 444433 3367999999986 5 589988 44468999
Q ss_pred Eec-CCCCcEEEEec----ccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceee
Q psy17325 222 IGM-DGSNRSTIIST----KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI 296 (461)
Q Consensus 222 ~~~-dG~~~~~i~~~----~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I 296 (461)
.+. +|. .+.+... ....|++|++|+ .++||++|.....+....+.. -..+... +.|
T Consensus 95 ~d~~~g~-~~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~-------------~~~~~~~----~~l 155 (296)
T 3e5z_A 95 QREPGGE-WESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYG-------------GEMELPG----RWV 155 (296)
T ss_dssp ECSTTCC-EEEEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSC-------------CCCCSSS----CEE
T ss_pred EcCCCCc-EEEEeeccCCCCCCCCCCEEECC-CCCEEEECCcccccccccccc-------------ccccCCC----cEE
Confidence 998 554 3333221 235689999997 678999875321100000000 0000000 357
Q ss_pred eEEeCCCCceEEEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeec--CCC---eEEEeeCCCCCc
Q psy17325 297 GKANMDGSNASILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD--GSN---RSTIISTKIYWP 370 (461)
Q Consensus 297 ~~~~~~g~~~~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~d--G~~---~~~l~~~~l~~p 370 (461)
++.+.+|.. +.+..... |++|+++|.++.| |++.. ..+|++.+++ |+. ..++ ......|
T Consensus 156 ~~~~~~g~~-~~~~~~~~~~~gi~~s~dg~~l-v~~~~------------~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p 220 (296)
T 3e5z_A 156 FRLAPDGTL-SAPIRDRVKPNGLAFLPSGNLL-VSDTG------------DNATHRYCLNARGETEYQGVHF-TVEPGKT 220 (296)
T ss_dssp EEECTTSCE-EEEECCCSSEEEEEECTTSCEE-EEETT------------TTEEEEEEECSSSCEEEEEEEE-CCSSSCC
T ss_pred EEECCCCCE-EEeecCCCCCccEEECCCCCEE-EEeCC------------CCeEEEEEECCCCcCcCCCeEe-eCCCCCC
Confidence 888877543 33333222 9999999988777 88877 6788888875 433 3344 4456789
Q ss_pred eeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEe-eeCCEEEEEeCCCceeecc
Q psy17325 371 NGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALD-LENGMLYYSTEGAEFLKTP 449 (461)
Q Consensus 371 ~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~lYwtd~~~~~i~~~ 449 (461)
.+|++| .+++||++. .+.|.+++. +|.....+..... . ...++. .+++.||++.. .+.+++.
T Consensus 221 ~~i~~d-~~G~l~v~~--~~~v~~~~~--~g~~~~~~~~~~~-~----------~~~~f~~~d~~~L~v~t~-~~l~~~~ 283 (296)
T 3e5z_A 221 DGLRVD-AGGLIWASA--GDGVHVLTP--DGDELGRVLTPQT-T----------SNLCFGGPEGRTLYMTVS-TEFWSIE 283 (296)
T ss_dssp CSEEEB-TTSCEEEEE--TTEEEEECT--TSCEEEEEECSSC-C----------CEEEEESTTSCEEEEEET-TEEEEEE
T ss_pred CeEEEC-CCCCEEEEc--CCeEEEECC--CCCEEEEEECCCC-c----------eeEEEECCCCCEEEEEcC-CeEEEEE
Confidence 999999 567899998 678999999 6765444432211 1 123332 23457999875 3544443
No 45
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.69 E-value=6.2e-15 Score=144.39 Aligned_cols=262 Identities=14% Similarity=0.140 Sum_probs=162.9
Q ss_pred eEEEcCccceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEE----ecCCCCCceeEEEcCC---CCceEEEEeecC
Q psy17325 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL----AKDNITQPRGMMLDPS---PGTRWLFWTDWG 214 (461)
Q Consensus 142 ~~~~~g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l----~~~~~~~p~~ia~d~~---~g~~~ly~td~~ 214 (461)
..+..++..|.+|++++. ++||+++.. ++|.+++ +|...... .......|.|||++|. ++ .||+++..
T Consensus 24 ~~va~~l~~P~~ia~~pd-G~l~V~e~~-g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g--~lYv~~~~ 98 (352)
T 2ism_A 24 EEVVGGLEVPWALAFLPD-GGMLIAERP-GRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEP--YVYAYRTV 98 (352)
T ss_dssp EEEECCCSCEEEEEECTT-SCEEEEETT-TEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSC--EEEEEEEE
T ss_pred EEEECCCCCceEEEEcCC-CeEEEEeCC-CeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCC--EEEEEEec
Confidence 356778999999999974 569999986 9999998 77533221 1234567999999998 78 99999842
Q ss_pred C----CCcEEEEecCCCC---cEEEEe------cccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeE
Q psy17325 215 E----NPRIERIGMDGSN---RSTIIS------TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRK 281 (461)
Q Consensus 215 ~----~~~I~~~~~dG~~---~~~i~~------~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~ 281 (461)
. ..+|.|.+.++.. .++++. .....|.+|++++ .++||+++......... .
T Consensus 99 ~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G~~~~~~~~-~-------------- 162 (352)
T 2ism_A 99 AEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTTGEVYERELA-Q-------------- 162 (352)
T ss_dssp CTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEECCCTTCGGGG-G--------------
T ss_pred CCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEECCCCCCccc-c--------------
Confidence 2 1689999998642 233433 1234689999998 46999998643221000 0
Q ss_pred EEEEecCCCCcceeeeEEeCCC-------------CceEEEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCC
Q psy17325 282 LYWIDEGGNGVPLKIGKANMDG-------------SNASILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENP 347 (461)
Q Consensus 282 ~yw~d~~~~~~~~~I~~~~~~g-------------~~~~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~ 347 (461)
|.. ...++|.|.+++| ...+++..... |.+|++||..+.||+++.+... +-+ ....
T Consensus 163 ----d~~--~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~-~~~---~~~d 232 (352)
T 2ism_A 163 ----DLA--SLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSG-EQG---YGHD 232 (352)
T ss_dssp ----CTT--CSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC----------CCC
T ss_pred ----CCC--CCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCC-CCC---CCCe
Confidence 000 0014799999998 33444444333 9999999988999999877211 100 0011
Q ss_pred ceEEEeecC---------------CCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEcccc
Q psy17325 348 RIERIGMDG---------------SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412 (461)
Q Consensus 348 ~I~~~~~dG---------------~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~ 412 (461)
+|.++...+ ....++.......|.||++ .++.||+++...++|.++++++.+....+ .....
T Consensus 233 ei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~--~~G~l~v~~~~~~~v~~v~~~~~~~~~~~-~~~~~ 309 (352)
T 2ism_A 233 EVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAF--FRGDLYVAGLRGQALLRLVLEGERGRWRV-LRVET 309 (352)
T ss_dssp EEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEE--ETTEEEEEETTTTEEEEEEEEEETTEEEE-EEEEE
T ss_pred EEEEeccCCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEE--ECCEEEEEECCCCEEEEEEECCCCcceee-cchhe
Confidence 244433211 0111111133446999999 78999999999999999999654432100 00000
Q ss_pred ceeeccCCCCCcceEEEeee-CCEEEEEeCCC
Q psy17325 413 EFTNDLMGDNGVPALALDLE-NGMLYYSTEGA 443 (461)
Q Consensus 413 ~~~~~~~~~~~~~~~~l~~~-~~~lYwtd~~~ 443 (461)
.+. ....|.++++. +|.||+++++.
T Consensus 310 ~~~------~~~rp~~v~~~pdG~lyv~~~~~ 335 (352)
T 2ism_A 310 ALS------GFGRLREVQVGPDGALYVTTSNR 335 (352)
T ss_dssp EEE------SSCCEEEEEECTTSCEEEEECST
T ss_pred ecc------cCCCeeEEEECCCCcEEEEEeCC
Confidence 000 01136677765 57999999764
No 46
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.68 E-value=3.2e-14 Score=139.36 Aligned_cols=250 Identities=17% Similarity=0.195 Sum_probs=163.5
Q ss_pred EEEcCccceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEe-----cCCCCCceeEEEcCC---CCceEEEEeecC
Q psy17325 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA-----KDNITQPRGMMLDPS---PGTRWLFWTDWG 214 (461)
Q Consensus 143 ~~~~g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~-----~~~~~~p~~ia~d~~---~g~~~ly~td~~ 214 (461)
++..++..|.+|++++ .++||+++.. ++|.+++.+|. +.+. ......|.|||++|. +| .||+++..
T Consensus 23 ~va~~l~~P~~ia~~p-dG~l~V~e~~-g~I~~~d~~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g--~lyv~~~~ 96 (354)
T 3a9g_A 23 EVASDLEVPWSIAPLG-GGRYLVTERP-GRLVLISPSGK--KLVASFDVANVGEAGLLGLALHPEFPKKS--WVYLYASY 96 (354)
T ss_dssp EEECSCSCEEEEEEEE-TTEEEEEETT-TEEEEECSSCE--EEEEECCCCCSTTCSEEEEEECTTTTTSC--EEEEEEEE
T ss_pred EEeCCCCCCeEEEEcC-CCeEEEEeCC-CEEEEEeCCCc--eEeeccceeecCCCceeeEEeCCCCCcCC--EEEEEEec
Confidence 4667899999999997 5679999987 99999988886 3332 233467999999998 78 99999842
Q ss_pred --CC----CcEEEEecCCCC-----cEEEEe----cccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceee
Q psy17325 215 --EN----PRIERIGMDGSN-----RSTIIS----TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIF 279 (461)
Q Consensus 215 --~~----~~I~~~~~dG~~-----~~~i~~----~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~ 279 (461)
.. .+|.|.++++.. .++++. .....|.+|++++ .++||++...........
T Consensus 97 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~------------- 162 (354)
T 3a9g_A 97 FAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTGDAADPRLAQ------------- 162 (354)
T ss_dssp ECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECCCTTCGGGGT-------------
T ss_pred cCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEECCCCCCcccc-------------
Confidence 12 689999988752 333433 1345689999998 568999975432110000
Q ss_pred eEEEEEecCCCCcceeeeEEeCCCC--------ceEEEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceE
Q psy17325 280 RKLYWIDEGGNGVPLKIGKANMDGS--------NASILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350 (461)
Q Consensus 280 ~~~yw~d~~~~~~~~~I~~~~~~g~--------~~~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~ 350 (461)
|. ....++|.|.+++|+ ..+++..... |.+|++|+..+.||+++.+... ...|.
T Consensus 163 ------d~--~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~---------~dei~ 225 (354)
T 3a9g_A 163 ------DL--SSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVG---------HDEVN 225 (354)
T ss_dssp ------CT--TCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSS---------CCEEE
T ss_pred ------CC--CCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCC---------CcEEE
Confidence 00 001147999999997 4455544333 9999999988999999876111 01233
Q ss_pred EEeecCCC----------------eEEEee-CCCCCceeEEE-------ecCCCeEEEEcCCCCeEEEEEecCCCCeE--
Q psy17325 351 RIGMDGSN----------------RSTIIS-TKIYWPNGLTL-------DIATRRVYFADSKLDFIDFCNYDGTGRQQ-- 404 (461)
Q Consensus 351 ~~~~dG~~----------------~~~l~~-~~l~~p~glai-------D~~~~~ly~~d~~~~~I~~~~~~g~g~~~-- 404 (461)
++.. |.+ ..++.. .....|.||++ + .++.||+++...++|.+++++++|...
T Consensus 226 ~i~~-G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~-~~G~l~v~~~~~~~v~~~~~~~~g~~~~~ 303 (354)
T 3a9g_A 226 IILK-GGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPG-LRGWLLIACLRGSMLAAVNFGDNMEVRKI 303 (354)
T ss_dssp EECT-TCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGG-GTTEEEEEETTTTEEEEEEECGGGCEEEE
T ss_pred EecC-CCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcc-cCCcEEEEEcCCCEEEEEEECCCCcccce
Confidence 3221 111 111111 23346999999 5 678999999999999999995444321
Q ss_pred EEEEccccceeeccCCCCCcceEEEeee-CCEEEEEeCC
Q psy17325 405 VILIDLMVEFTNDLMGDNGVPALALDLE-NGMLYYSTEG 442 (461)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~lYwtd~~ 442 (461)
..+... ....|.++++. +|.||++++.
T Consensus 304 ~~~~~~-----------~~~rp~~v~~~pDG~lyv~~~~ 331 (354)
T 3a9g_A 304 STFFKN-----------VFGRLRDVVIDDDGGILISTSN 331 (354)
T ss_dssp EEECTT-----------TSCCEEEEEECTTSCEEEEECT
T ss_pred eeeccC-----------CCCCeeEEEECCCCcEEEEEeC
Confidence 111111 01235677665 4799999974
No 47
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.66 E-value=3.4e-14 Score=134.25 Aligned_cols=196 Identities=16% Similarity=0.191 Sum_probs=150.4
Q ss_pred ccceeeeeeeecCCeEEEEeCC-CCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCC
Q psy17325 148 LDLVEGLAYDWIGGHIYWLDSR-LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226 (461)
Q Consensus 148 ~~~p~~iavd~~~~~ly~~d~~-~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG 226 (461)
+..|.+++++...++||+++.. .+.|.+.+.+|.....+.......|.+|++|+. | .||+++ ....+|.+.+.+|
T Consensus 76 ~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~-g--~l~v~~-~~~~~i~~~~~~g 151 (286)
T 1q7f_A 76 LLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNK-G--RIIVVE-CKVMRVIIFDQNG 151 (286)
T ss_dssp BSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTCSCEEEEEECTT-S--CEEEEE-TTTTEEEEECTTS
T ss_pred ccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccCCCceEEEEeCC-C--CEEEEE-CCCCEEEEEcCCC
Confidence 4579999997678999999975 789999999998776665555678999999986 5 699999 4457899999888
Q ss_pred CCcEEEEe-cccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCc
Q psy17325 227 SNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305 (461)
Q Consensus 227 ~~~~~i~~-~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~ 305 (461)
.....+.. ..+..|.+|++|+ .++||+++.... .|.+.+.+|..
T Consensus 152 ~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~----------------------------------~i~~~~~~g~~ 196 (286)
T 1q7f_A 152 NVLHKFGCSKHLEFPNGVVVND-KQEIFISDNRAH----------------------------------CVKVFNYEGQY 196 (286)
T ss_dssp CEEEEEECTTTCSSEEEEEECS-SSEEEEEEGGGT----------------------------------EEEEEETTCCE
T ss_pred CEEEEeCCCCccCCcEEEEECC-CCCEEEEECCCC----------------------------------EEEEEcCCCCE
Confidence 65544432 3456899999997 577999987653 46777777775
Q ss_pred eEEEEeCC-e--eeeEEEeccCCeEEEeecCceeeEEEeecCCCC-ceEEEeecCCCeEEEee-CCCCCceeEEEecCCC
Q psy17325 306 ASILVSGQ-L--YEALALDLENGMLYYSTLKCTRWLFWTDWGENP-RIERIGMDGSNRSTIIS-TKIYWPNGLTLDIATR 380 (461)
Q Consensus 306 ~~~l~~~~-~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~-~I~~~~~dG~~~~~l~~-~~l~~p~glaiD~~~~ 380 (461)
...+.... + |.+|++|+ .|+||+++.. ++ +|.+.+.+|.....+.. .....|.+|++|+ ++
T Consensus 197 ~~~~~~~g~~~~p~~i~~d~-~G~l~v~~~~------------~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~-~g 262 (286)
T 1q7f_A 197 LRQIGGEGITNYPIGVGINS-NGEILIADNH------------NNFNLTIFTQDGQLISALESKVKHAQCFDVALMD-DG 262 (286)
T ss_dssp EEEESCTTTSCSEEEEEECT-TCCEEEEECS------------SSCEEEEECTTSCEEEEEEESSCCSCEEEEEEET-TT
T ss_pred EEEEccCCccCCCcEEEECC-CCCEEEEeCC------------CCEEEEEECCCCCEEEEEcccCCCCcceeEEECC-CC
Confidence 55554332 2 99999997 4688888766 54 88888888876666653 2345699999995 67
Q ss_pred eEEEEcCCCCeEEEEEe
Q psy17325 381 RVYFADSKLDFIDFCNY 397 (461)
Q Consensus 381 ~ly~~d~~~~~I~~~~~ 397 (461)
+||+++. .++|..+++
T Consensus 263 ~l~vs~~-~~~v~v~~~ 278 (286)
T 1q7f_A 263 SVVLASK-DYRLYIYRY 278 (286)
T ss_dssp EEEEEET-TTEEEEEEC
T ss_pred cEEEECC-CCeEEEEEc
Confidence 8999975 678888877
No 48
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.63 E-value=4.8e-13 Score=129.13 Aligned_cols=248 Identities=16% Similarity=0.138 Sum_probs=162.1
Q ss_pred EEcCccceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCC---CCcEE
Q psy17325 144 VVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE---NPRIE 220 (461)
Q Consensus 144 ~~~g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~---~~~I~ 220 (461)
+..+...|+++++|. .++|||++...+.|.+.++++.....+.......|.+|++++. | .||++.... ...|.
T Consensus 40 ~~~~~~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~d-g--~l~v~~~~~~~~~~~i~ 115 (333)
T 2dg1_A 40 ISKKGLQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKD-G--RLFVCYLGDFKSTGGIF 115 (333)
T ss_dssp EESSCCCEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTT-S--CEEEEECTTSSSCCEEE
T ss_pred EeccCccccCcEECC-CCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCC-C--cEEEEeCCCCCCCceEE
Confidence 344566789999995 5679999999999999998876655544333357999999987 5 588887332 15899
Q ss_pred EEecCCCCcEEEEec--ccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeE
Q psy17325 221 RIGMDGSNRSTIIST--KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGK 298 (461)
Q Consensus 221 ~~~~dG~~~~~i~~~--~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~ 298 (461)
+.+.++.....++.. ....|.++++|+ .++||+++.....- .. ...|++
T Consensus 116 ~~d~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~------------------------~~----~~~l~~ 166 (333)
T 2dg1_A 116 AATENGDNLQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYST------------------------NP----LGGVYY 166 (333)
T ss_dssp EECTTSCSCEEEECSSSSCCCEEEEEECT-TSCEEEEECCCBTT------------------------BC----CEEEEE
T ss_pred EEeCCCCEEEEEEccCccCCcccceEECC-CCCEEEEecccccc------------------------CC----CceEEE
Confidence 999988766544431 234799999997 56888887642000 00 035777
Q ss_pred EeCCCCceEEEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEee--cCCCeEE-----Eee-CCCCC
Q psy17325 299 ANMDGSNASILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM--DGSNRST-----IIS-TKIYW 369 (461)
Q Consensus 299 ~~~~g~~~~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~--dG~~~~~-----l~~-~~l~~ 369 (461)
.+.++...+.+..... |+++++++.++.||+++.. .+.|++.++ +|..... +.. .....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~------------~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~ 234 (333)
T 2dg1_A 167 VSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETT------------ANRLHRIALEDDGVTIQPFGATIPYYFTGHEG 234 (333)
T ss_dssp ECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGG------------GTEEEEEEECTTSSSEEEEEEEEEEECCSSSE
T ss_pred EeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCC------------CCeEEEEEecCCCcCcccccceEEEecCCCCC
Confidence 7777655544433222 9999999988889998876 557777777 3443221 111 22357
Q ss_pred ceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeCCC
Q psy17325 370 PNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGA 443 (461)
Q Consensus 370 p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~~~ 443 (461)
|.+|++| .+++||+++...+.|.+++. +|.....+........ . ...+..++++.+++.||++....
T Consensus 235 ~~~i~~d-~~G~l~v~~~~~~~v~~~d~--~g~~~~~~~~~~~~~g-~---~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 235 PDSCCID-SDDNLYVAMYGQGRVLVFNK--RGYPIGQILIPGRDEG-H---MLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp EEEEEEB-TTCCEEEEEETTTEEEEECT--TSCEEEEEECTTGGGT-C---SCBCCEEEECTTSCEEEEEEECG
T ss_pred CCceEEC-CCCCEEEEEcCCCEEEEECC--CCCEEEEEEcCCCccc-c---ccCcceEEECCCCCEEEEEeCcc
Confidence 9999999 56889999988889999998 6665444332111000 0 00112344444456899988763
No 49
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.63 E-value=4.6e-14 Score=137.67 Aligned_cols=257 Identities=15% Similarity=0.155 Sum_probs=151.6
Q ss_pred cceeeeeeeecCCeEEEEeCC--CC--eEEEEeCCCCcEEEE------ecCCCCCceeEEEcCCCCceEEEEeecCC---
Q psy17325 149 DLVEGLAYDWIGGHIYWLDSR--LN--RIEVCDENGTNRIVL------AKDNITQPRGMMLDPSPGTRWLFWTDWGE--- 215 (461)
Q Consensus 149 ~~p~~iavd~~~~~ly~~d~~--~~--~I~~~~~~G~~~~~l------~~~~~~~p~~ia~d~~~g~~~ly~td~~~--- 215 (461)
..|.+|++++ .+++|++... .+ +|.+++ +|... .+ ....+..|.+|++|+. | .|||+|.+.
T Consensus 17 ~~p~~va~~~-~g~~~v~~~~~~~~~~~l~~~~-~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~-g--~L~v~D~g~~~~ 90 (343)
T 2qe8_A 17 LAPGNITLTP-DGRLFLSLHQFYQPEMQVAELT-QDGLI-PFPPQSGNAIITFDTVLGIKSDGN-G--IVWMLDNGNQSK 90 (343)
T ss_dssp SCEEEEEECT-TSCEEEEECGGGCCSCSEEEEE-TTEEE-ESCCCCSSCCCCCSCEEEEEECSS-S--EEEEEECHHHHT
T ss_pred CCcceEEECC-CCCEEEEeCCCCCCceEEEEEC-CCCee-cCCCcccCcccceeEeeEEEEcCC-C--cEEEEcCCCCcC
Confidence 5799999986 5789999753 23 788887 66422 11 1124678999999987 6 799999542
Q ss_pred -CCcEEEEecC-CCCcEEEEec-----ccccceeEEeeccCCeeEEecC---CCceeeeccccee---eeecc--ceee-
Q psy17325 216 -NPRIERIGMD-GSNRSTIIST-----KIYWPNGLTLDIATRRVYFADS---KLDFIDCKSLEIK---TNVNY--STIF- 279 (461)
Q Consensus 216 -~~~I~~~~~d-G~~~~~i~~~-----~~~~P~glavD~~~~~ly~~d~---~~~~i~~~~~~~~---~~v~~--~~~~- 279 (461)
..+|.+.++. |.....+... ....|++|++|+..+.+|++|. ....|...+.+.. +.+.. ....
T Consensus 91 ~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~ 170 (343)
T 2qe8_A 91 SVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPE 170 (343)
T ss_dssp SCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCC
T ss_pred CCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccc
Confidence 4689999987 4323333221 1236899999988889999998 5544433221110 00000 0000
Q ss_pred eEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCeeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeec----
Q psy17325 280 RKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD---- 355 (461)
Q Consensus 280 ~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~d---- 355 (461)
...++.+ | ..+.....+|+.. .. ...|+||+++|.++.||+++.. ..+|++.+.+
T Consensus 171 ~~~~~~~----g--~~~~~~~~~g~~~--~~-~~~~~gia~s~dg~~ly~~~~~------------~~~l~~~~~~~~~~ 229 (343)
T 2qe8_A 171 DIDLVID----G--VPVQIGQPDGTVI--RP-HLGVNGIVLDAENEWLYLSPMH------------STSMYRIKSADLSN 229 (343)
T ss_dssp SCCCEET----T--EECBEECTTSCEE--CC-CCCEEEEEECTTSCEEEEEESS------------CSEEEEEEHHHHTC
T ss_pred ccceeEC----C--EEEEeccCCCcee--ce-ecccceeEeccCCCEEEEEeCC------------CCeEEEEEHHHhcC
Confidence 0000000 0 0011111111100 00 0118999999988889998876 5577777642
Q ss_pred CC--CeE-----EEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEE
Q psy17325 356 GS--NRS-----TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALA 428 (461)
Q Consensus 356 G~--~~~-----~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (461)
+. ..+ ... .....|.||++| .+++||+++...++|.+++.. +|....+ ... +.+ ..|.+
T Consensus 230 ~~~~~~~~~~~~~~~-g~~g~pdgia~d-~~G~l~va~~~~~~V~~~d~~-~G~~~~~-~~~-~~~---------~~p~~ 295 (343)
T 2qe8_A 230 LQLTDAELGSKIERY-SEKPICDGISID-KDHNIYVGDLAHSAIGVITSA-DRAYKLL-VTD-EKL---------SWTDS 295 (343)
T ss_dssp TTCCHHHHHTTCEEE-EECCSCSCEEEC-TTCCEEEEEGGGTEEEEEETT-TTEEEEE-EEC-GGG---------SCEEE
T ss_pred CCCChhhhhcceEec-ccCCCCceEEEC-CCCCEEEEccCCCeEEEEECC-CCCEEEE-EEC-Cce---------ecCCe
Confidence 21 110 111 233479999999 468999999999999999981 3543333 221 111 13667
Q ss_pred Eeee-CCEEEEEeCCCcee
Q psy17325 429 LDLE-NGMLYYSTEGAEFL 446 (461)
Q Consensus 429 l~~~-~~~lYwtd~~~~~i 446 (461)
+++. ++.||+++...+++
T Consensus 296 va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 296 FNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp EEECTTSCEEEEECCGGGS
T ss_pred eEECCCCcEEEEeCccccc
Confidence 7764 57999999877654
No 50
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.63 E-value=1e-13 Score=132.42 Aligned_cols=252 Identities=13% Similarity=0.121 Sum_probs=160.0
Q ss_pred EEEcCccceeeeeeeecCCeEEEE-------eCCCCeEEEEeCCCCcEEEEec----CCCCCceeEEEcCCCCceEEEEe
Q psy17325 143 IVVSGLDLVEGLAYDWIGGHIYWL-------DSRLNRIEVCDENGTNRIVLAK----DNITQPRGMMLDPSPGTRWLFWT 211 (461)
Q Consensus 143 ~~~~g~~~p~~iavd~~~~~ly~~-------d~~~~~I~~~~~~G~~~~~l~~----~~~~~p~~ia~d~~~g~~~ly~t 211 (461)
.+..++..|+++++| ..++||++ +...+.|.+.++.......+.. .....|.+|++|+..| .||++
T Consensus 12 ~~~~~~~~~~~~~~~-~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g--~l~v~ 88 (314)
T 1pjx_A 12 KVTEDIPGAEGPVFD-KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDAN--QLFVA 88 (314)
T ss_dssp EEECCCTTCEEEEEC-TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSS--EEEEE
T ss_pred hhhccCCCccCceEC-CCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCC--cEEEE
Confidence 356788899999999 67799999 8878999999964433333322 1225699999998767 89999
Q ss_pred ecCCCCcEEEEecCCCCcEEE-Eec----ccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEe
Q psy17325 212 DWGENPRIERIGMDGSNRSTI-IST----KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWID 286 (461)
Q Consensus 212 d~~~~~~I~~~~~dG~~~~~i-~~~----~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d 286 (461)
+. . ..|.+.+.+|. ...+ ... ....|.+|++|+ .++||+++........ .. ..
T Consensus 89 ~~-~-~~l~~~d~~g~-~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~-~~-----------------~~ 146 (314)
T 1pjx_A 89 DM-R-LGLLVVQTDGT-FEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPA-DY-----------------TR 146 (314)
T ss_dssp ET-T-TEEEEEETTSC-EEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTS-CC-----------------CB
T ss_pred EC-C-CCEEEEeCCCC-EEEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccccc-cc-----------------cc
Confidence 83 2 38999998843 3333 221 234689999997 5789998864310000 00 00
Q ss_pred cCCCCcceeeeEEeCCCCceEEEEeCCeeeeEEEe----ccCCeEEEeecCceeeEEEeecCCCCceEEEeec--CCC--
Q psy17325 287 EGGNGVPLKIGKANMDGSNASILVSGQLYEALALD----LENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD--GSN-- 358 (461)
Q Consensus 287 ~~~~~~~~~I~~~~~~g~~~~~l~~~~~p~~iavd----~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~d--G~~-- 358 (461)
........|.+.+.+|+..........|++++++ +.++.||+++.. .++|.+.+++ |+.
T Consensus 147 -~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~------------~~~i~~~~~~~~g~~~~ 213 (314)
T 1pjx_A 147 -SMQEKFGSIYCFTTDGQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETP------------TKKLWSYDIKGPAKIEN 213 (314)
T ss_dssp -TTSSSCEEEEEECTTSCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETT------------TTEEEEEEEEETTEEEE
T ss_pred -cccCCCCeEEEECCCCCEEEeccCCCCcceEEEecccCCCCCEEEEEECC------------CCeEEEEECCCCCcccc
Confidence 0000003577777775433332222229999999 877788988776 6678888765 321
Q ss_pred eEEEee--CCC-CCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEee--eC
Q psy17325 359 RSTIIS--TKI-YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDL--EN 433 (461)
Q Consensus 359 ~~~l~~--~~l-~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~ 433 (461)
...+.. ... ..|.+|++| .+++||+++...+.|.+++.+ +|.....+.... ..+.++++ ++
T Consensus 214 ~~~~~~~~~~~~~~p~~i~~d-~~G~l~v~~~~~~~i~~~d~~-~g~~~~~~~~~~------------~~~~~i~~~~dg 279 (314)
T 1pjx_A 214 KKVWGHIPGTHEGGADGMDFD-EDNNLLVANWGSSHIEVFGPD-GGQPKMRIRCPF------------EKPSNLHFKPQT 279 (314)
T ss_dssp EEEEEECCCCSSCEEEEEEEB-TTCCEEEEEETTTEEEEECTT-CBSCSEEEECSS------------SCEEEEEECTTS
T ss_pred ceEEEECCCCCCCCCCceEEC-CCCCEEEEEcCCCEEEEEcCC-CCcEeEEEeCCC------------CCceeEEECCCC
Confidence 112221 122 579999999 568999999888899999983 255433322111 12455655 44
Q ss_pred CEEEEEeCCCcee
Q psy17325 434 GMLYYSTEGAEFL 446 (461)
Q Consensus 434 ~~lYwtd~~~~~i 446 (461)
..||+++..++.|
T Consensus 280 ~~l~v~~~~~~~l 292 (314)
T 1pjx_A 280 KTIFVTEHENNAV 292 (314)
T ss_dssp SEEEEEETTTTEE
T ss_pred CEEEEEeCCCCeE
Confidence 4599999887655
No 51
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.62 E-value=5.3e-14 Score=135.84 Aligned_cols=207 Identities=14% Similarity=0.155 Sum_probs=144.2
Q ss_pred cceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEec----CCCCCceeEEEcCCCCceEEEEeecCC---------
Q psy17325 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK----DNITQPRGMMLDPSPGTRWLFWTDWGE--------- 215 (461)
Q Consensus 149 ~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~----~~~~~p~~ia~d~~~g~~~ly~td~~~--------- 215 (461)
..|.||++|...++||++|.. +.|.++++++...+.+.. ..+..|.+|++|+..| .||++|...
T Consensus 80 ~~p~gi~~~~~~g~l~v~d~~-~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G--~l~v~d~~~~~~~~~~~~ 156 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIVDCY-YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTG--IVYFTDVSTLYDDRGVQQ 156 (322)
T ss_dssp CCEEEEEEETTTTEEEEEETT-TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTC--CEEEEESCSSCCTTCHHH
T ss_pred CCCceEEEcCCCCcEEEEECC-CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCC--EEEEECCcccccccccce
Confidence 469999999767899999986 458899988654444432 1245699999999446 799999542
Q ss_pred -------CCcEEEEecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecC
Q psy17325 216 -------NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288 (461)
Q Consensus 216 -------~~~I~~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~ 288 (461)
..+|++.+.++...+.+. ..+..|+||++++.++.||++|....
T Consensus 157 ~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyv~d~~~~---------------------------- 207 (322)
T 2fp8_A 157 IMDTSDKTGRLIKYDPSTKETTLLL-KELHVPGGAEVSADSSFVLVAEFLSH---------------------------- 207 (322)
T ss_dssp HHHHTCCCEEEEEEETTTTEEEEEE-EEESCCCEEEECTTSSEEEEEEGGGT----------------------------
T ss_pred ehcccCCCceEEEEeCCCCEEEEec-cCCccCcceEECCCCCEEEEEeCCCC----------------------------
Confidence 257888888754444333 45778999999988788999998764
Q ss_pred CCCcceeeeEEeCCCC---ceEEEEeCCeeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeC
Q psy17325 289 GNGVPLKIGKANMDGS---NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST 365 (461)
Q Consensus 289 ~~~~~~~I~~~~~~g~---~~~~l~~~~~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~ 365 (461)
+|.+.++++. ..+++.....|.+|++|+ .|+||+++.....-+ ...+..++|.+.+.+|+....+...
T Consensus 208 ------~I~~~~~~~~~~~~~~~~~~~~gP~gi~~d~-~G~l~va~~~~~~~~--~~~~~~~~v~~~d~~G~~~~~~~~~ 278 (322)
T 2fp8_A 208 ------QIVKYWLEGPKKGTAEVLVKIPNPGNIKRNA-DGHFWVSSSEELDGN--MHGRVDPKGIKFDEFGNILEVIPLP 278 (322)
T ss_dssp ------EEEEEESSSTTTTCEEEEEECSSEEEEEECT-TSCEEEEEEEETTSS--TTSCEEEEEEEECTTSCEEEEEECC
T ss_pred ------eEEEEECCCCcCCccceEEeCCCCCCeEECC-CCCEEEEecCccccc--ccCCCccEEEEECCCCCEEEEEECC
Confidence 4666666652 234433311199999997 567888764200000 0001135788888888766666533
Q ss_pred C---CCCceeEEEecCCCeEEEEcCCCCeEEEEEec
Q psy17325 366 K---IYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398 (461)
Q Consensus 366 ~---l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~ 398 (461)
. +..|.+++. .+++||+++...++|.+++++
T Consensus 279 ~g~~~~~~~~~~~--~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 279 PPFAGEHFEQIQE--HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp TTTTTSCCCEEEE--ETTEEEEECSSCSEEEEEEC-
T ss_pred CCCccccceEEEE--eCCEEEEeecCCCceEEEecc
Confidence 2 678999988 579999999999999999993
No 52
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.60 E-value=5.8e-12 Score=121.92 Aligned_cols=231 Identities=13% Similarity=0.126 Sum_probs=158.6
Q ss_pred cceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcE-EEEecCCCC--------CceeEEEcCCCCceEEEEeecCCCCcE
Q psy17325 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLAKDNIT--------QPRGMMLDPSPGTRWLFWTDWGENPRI 219 (461)
Q Consensus 149 ~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~-~~l~~~~~~--------~p~~ia~d~~~g~~~ly~td~~~~~~I 219 (461)
..|.++++++.++.+|+++...+.|.+.++..... ..+....-. .|.+++++|..+ +||+++++....|
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~--~l~~~~~~~~~~i 166 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATN--TVYISGIGKESVI 166 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTT--EEEEEEESSSCEE
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCC--EEEEEecCCCceE
Confidence 35889999998889999999999999999865443 333322111 388999999977 9999996666789
Q ss_pred EEEecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEE
Q psy17325 220 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKA 299 (461)
Q Consensus 220 ~~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~ 299 (461)
...++........+...-..|.++++++.++.||+++... .|.+.
T Consensus 167 ~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----------------------------------~i~~~ 211 (353)
T 3vgz_A 167 WVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADG-----------------------------------ELITI 211 (353)
T ss_dssp EEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTS-----------------------------------EEEEE
T ss_pred EEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCC-----------------------------------eEEEE
Confidence 9999875444333332234599999999999999988642 34445
Q ss_pred eCCCCceEEEEeC-----C-eeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeE
Q psy17325 300 NMDGSNASILVSG-----Q-LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 373 (461)
Q Consensus 300 ~~~g~~~~~l~~~-----~-~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~gl 373 (461)
++........+.. . .|.+++++|.++.||+++.. .+.|...++........+ .+..|.++
T Consensus 212 d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------------~~~v~~~d~~~~~~~~~~--~~~~~~~~ 277 (353)
T 3vgz_A 212 DTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK------------AAEVLVVDTRNGNILAKV--AAPESLAV 277 (353)
T ss_dssp ETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS------------SSEEEEEETTTCCEEEEE--ECSSCCCE
T ss_pred ECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC------------CCEEEEEECCCCcEEEEE--EcCCCceE
Confidence 5443322222221 1 17789999999999998776 567777776443332222 23567899
Q ss_pred EEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeCC
Q psy17325 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442 (461)
Q Consensus 374 aiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~~ 442 (461)
++++++++||+++...+.|..+++. ++.....+.. ... +..++++.++..||++...
T Consensus 278 ~~s~dg~~l~v~~~~~~~v~~~d~~-~~~~~~~~~~-~~~----------~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 278 LFNPARNEAYVTHRQAGKVSVIDAK-SYKVVKTFDT-PTH----------PNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETT-TTEEEEEEEC-CSE----------EEEEEECTTSCEEEEEEEC
T ss_pred EECCCCCEEEEEECCCCeEEEEECC-CCeEEEEEec-CCC----------CCeEEEcCCCCEEEEEEcc
Confidence 9998888999999989999999993 4544333322 111 1134555567789999876
No 53
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.58 E-value=1.7e-12 Score=125.49 Aligned_cols=236 Identities=11% Similarity=0.072 Sum_probs=157.9
Q ss_pred EEEcCccceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEE
Q psy17325 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI 222 (461)
Q Consensus 143 ~~~~g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~ 222 (461)
+...+...++++++++.++.+||+|...++|.+.++++.....+... ..|.+|++++. | .++++. ...|++.
T Consensus 43 ~~~~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~--~~v~~i~~~~d-g--~l~v~~---~~gl~~~ 114 (326)
T 2ghs_A 43 LDETPMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHALP--FMGSALAKISD-S--KQLIAS---DDGLFLR 114 (326)
T ss_dssp EECSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEECS--SCEEEEEEEET-T--EEEEEE---TTEEEEE
T ss_pred eeccCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEECC--CcceEEEEeCC-C--eEEEEE---CCCEEEE
Confidence 34445667999999988899999999999999999987765544322 46899999986 5 577665 2369999
Q ss_pred ecCCCCcEEEEec----ccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeE
Q psy17325 223 GMDGSNRSTIIST----KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGK 298 (461)
Q Consensus 223 ~~dG~~~~~i~~~----~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~ 298 (461)
+.++...+.+... ....|+++++|+ .++||+++.....- .. ...|++
T Consensus 115 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~------------------------~~----~~~l~~ 165 (326)
T 2ghs_A 115 DTATGVLTLHAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAE------------------------TG----AGSIYH 165 (326)
T ss_dssp ETTTCCEEEEECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCC------------------------TT----CEEEEE
T ss_pred ECCCCcEEEEeeCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCC------------------------CC----ceEEEE
Confidence 8876555444432 124688999997 56688876421000 00 034677
Q ss_pred EeCCCCceEEEEeC-CeeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeec---C-C--CeEEEee--CCCCC
Q psy17325 299 ANMDGSNASILVSG-QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD---G-S--NRSTIIS--TKIYW 369 (461)
Q Consensus 299 ~~~~g~~~~~l~~~-~~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~d---G-~--~~~~l~~--~~l~~ 369 (461)
.+ +|+... +... ..|++|++++.++.|||++.. .++|++.+++ | . .++++.. .....
T Consensus 166 ~~-~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~------------~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~ 231 (326)
T 2ghs_A 166 VA-KGKVTK-LFADISIPNSICFSPDGTTGYFVDTK------------VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGG 231 (326)
T ss_dssp EE-TTEEEE-EEEEESSEEEEEECTTSCEEEEEETT------------TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSE
T ss_pred Ee-CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECC------------CCEEEEEEcccccCCcccCceEEEECCCCCCC
Confidence 76 544332 2222 229999999988889998876 6678888774 4 2 2233332 23457
Q ss_pred ceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEee---eCCEEEEEeCCCc
Q psy17325 370 PNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDL---ENGMLYYSTEGAE 444 (461)
Q Consensus 370 p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~lYwtd~~~~ 444 (461)
|.|+++| .+++||++....+.|.+++. +|.....+.... ..+.++++ +++.||++....+
T Consensus 232 p~gi~~d-~~G~lwva~~~~~~v~~~d~--~g~~~~~i~~~~------------~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 232 MDGSVCD-AEGHIWNARWGEGAVDRYDT--DGNHIARYEVPG------------KQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp EEEEEEC-TTSCEEEEEETTTEEEEECT--TCCEEEEEECSC------------SBEEEEEEESTTSCEEEEEEBCTT
T ss_pred CCeeEEC-CCCCEEEEEeCCCEEEEECC--CCCEEEEEECCC------------CCcEEEEEecCCCCEEEEEecCCC
Confidence 9999999 66799999887889999998 666544332211 11455554 3468999987764
No 54
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.58 E-value=4.2e-13 Score=130.01 Aligned_cols=236 Identities=14% Similarity=0.066 Sum_probs=152.1
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCC-CCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCC
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDEN-GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~-G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~ 228 (461)
.|.+++++ .+++|++....+.|.++++. ++....+ . ....|++|++++. | +||+++. ....|.+.++....
T Consensus 45 ~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i-~-~~~~p~~i~~~~~-g--~lyv~~~-~~~~v~~iD~~t~~ 116 (328)
T 3dsm_A 45 VAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRI-T-GFTSPRYIHFLSD-E--KAYVTQI-WDYRIFIINPKTYE 116 (328)
T ss_dssp CEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEE-E-CCSSEEEEEEEET-T--EEEEEEB-SCSEEEEEETTTTE
T ss_pred cceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEc-C-CCCCCcEEEEeCC-C--eEEEEEC-CCCeEEEEECCCCe
Confidence 57888886 79999999999999999987 4444444 2 3467999999765 6 8999993 35689998887543
Q ss_pred cEEEEecc-----cccceeEEeeccCCeeEEecCC-CceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCC
Q psy17325 229 RSTIISTK-----IYWPNGLTLDIATRRVYFADSK-LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMD 302 (461)
Q Consensus 229 ~~~i~~~~-----~~~P~glavD~~~~~ly~~d~~-~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~ 302 (461)
....+..+ ...|.+|+++ +++||+++.. . +.|.+.++.
T Consensus 117 ~~~~i~~g~~~~~~~~p~~i~~~--~~~lyv~~~~~~----------------------------------~~v~viD~~ 160 (328)
T 3dsm_A 117 ITGYIECPDMDMESGSTEQMVQY--GKYVYVNCWSYQ----------------------------------NRILKIDTE 160 (328)
T ss_dssp EEEEEECTTCCTTTCBCCCEEEE--TTEEEEEECTTC----------------------------------CEEEEEETT
T ss_pred EEEEEEcCCccccCCCcceEEEE--CCEEEEEcCCCC----------------------------------CEEEEEECC
Confidence 32222221 1279999994 8999999863 4 346677765
Q ss_pred CCceEEEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeE-EEeeCCCCCceeEEEecCCC
Q psy17325 303 GSNASILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS-TIISTKIYWPNGLTLDIATR 380 (461)
Q Consensus 303 g~~~~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~-~l~~~~l~~p~glaiD~~~~ 380 (461)
.......+.... |.+|++|+ .|++|++..+...-.-| -++.+.|++.+....... .+.......|.+|+++++++
T Consensus 161 t~~~~~~i~~g~~p~~i~~~~-dG~l~v~~~~~~~~~~~--~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~ 237 (328)
T 3dsm_A 161 TDKVVDELTIGIQPTSLVMDK-YNKMWTITDGGYEGSPY--GYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRD 237 (328)
T ss_dssp TTEEEEEEECSSCBCCCEECT-TSEEEEEBCCBCTTCSS--CBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSC
T ss_pred CCeEEEEEEcCCCccceEEcC-CCCEEEEECCCccCCcc--ccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCC
Confidence 443322233333 99999997 46688876540000000 001267888877543332 33222235899999998899
Q ss_pred eEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEee--eCCEEEEEe----CCCcee
Q psy17325 381 RVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDL--ENGMLYYST----EGAEFL 446 (461)
Q Consensus 381 ~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~lYwtd----~~~~~i 446 (461)
+||+++. .|.++++. ++... ...... .....|.+|++ .++.||+++ ..++.|
T Consensus 238 ~lyv~~~---~v~~~d~~-t~~~~-----~~~~~~-----~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V 295 (328)
T 3dsm_A 238 TLYWINN---DIWRMPVE-ADRVP-----VRPFLE-----FRDTKYYGLTVNPNNGEVYVADAIDYQQQGIV 295 (328)
T ss_dssp EEEEESS---SEEEEETT-CSSCC-----SSCSBC-----CCSSCEEEEEECTTTCCEEEEECTTSSSEEEE
T ss_pred EEEEEcc---EEEEEECC-CCcee-----eeeeec-----CCCCceEEEEEcCCCCeEEEEcccccccCCEE
Confidence 9999986 89999983 33321 000000 00122555655 579999999 777766
No 55
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.58 E-value=4.8e-13 Score=130.93 Aligned_cols=269 Identities=12% Similarity=0.068 Sum_probs=160.4
Q ss_pred EEEcCccceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEe------cCCCCCceeEEEcCC---CCceEEEEeec
Q psy17325 143 IVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA------KDNITQPRGMMLDPS---PGTRWLFWTDW 213 (461)
Q Consensus 143 ~~~~g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~------~~~~~~p~~ia~d~~---~g~~~ly~td~ 213 (461)
++..++..|.+|++++.++.||+++.. ++|.+++.+|...+.+. ......|.+||++|. ++ +||+++.
T Consensus 12 ~va~~l~~P~~i~~~pdG~~l~V~e~~-G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g--~lYv~~~ 88 (353)
T 2g8s_A 12 VLQDKLDHPWALAFLPDNHGMLITLRG-GELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSR--RIWLSYS 88 (353)
T ss_dssp EEEEEESSEEEEEECSTTCCEEEEETT-TEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHC--EEEEEEE
T ss_pred EEECCCCCcEEEEEcCCCCEEEEEeCC-ceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCC--EEEEEEe
Confidence 456688999999999754449999984 89999998875432221 122345789999996 78 9999974
Q ss_pred CC------CCcEEEEecCCC-----CcEEEEec------ccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccc
Q psy17325 214 GE------NPRIERIGMDGS-----NRSTIIST------KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYS 276 (461)
Q Consensus 214 ~~------~~~I~~~~~dG~-----~~~~i~~~------~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~ 276 (461)
.. ..+|.|..+++. ..++++.. ....|.+|++++ .++||++......... .
T Consensus 89 ~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~--~--------- 156 (353)
T 2g8s_A 89 EVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQRPT--A--------- 156 (353)
T ss_dssp EECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCGGG--G---------
T ss_pred CCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcEEEEECCCCCCCc--c---------
Confidence 21 357999988754 23444432 234588999998 5699999754321000 0
Q ss_pred eeeeEEEEEecCCCCcceeeeEEeCCCC-------------ceEEEEeCCe-eeeEEEeccCCeEEEeecCce--eeEEE
Q psy17325 277 TIFRKLYWIDEGGNGVPLKIGKANMDGS-------------NASILVSGQL-YEALALDLENGMLYYSTLKCT--RWLFW 340 (461)
Q Consensus 277 ~~~~~~yw~d~~~~~~~~~I~~~~~~g~-------------~~~~l~~~~~-p~~iavd~~~~~lY~t~~~~~--~~l~~ 340 (461)
+......++|.|.+++|+ ..++...... |.+|++|+..|.||+++.+.. ..|..
T Consensus 157 ----------q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~ 226 (353)
T 2g8s_A 157 ----------QDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINI 226 (353)
T ss_dssp ----------GCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEEC
T ss_pred ----------CCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeE
Confidence 000001147999999987 3444444333 999999998899999987621 11111
Q ss_pred eecCCC---CceEE-Eee-------------cCCCeEEEeeCCCCCceeEEEec------CCCeEEEEcCCCCeEEEEEe
Q psy17325 341 TDWGEN---PRIER-IGM-------------DGSNRSTIISTKIYWPNGLTLDI------ATRRVYFADSKLDFIDFCNY 397 (461)
Q Consensus 341 ~d~~~~---~~I~~-~~~-------------dG~~~~~l~~~~l~~p~glaiD~------~~~~ly~~d~~~~~I~~~~~ 397 (461)
...+.+ +.++- ... .+....++.......|.|+++.. ..+.||+++...++|.++++
T Consensus 227 i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~ 306 (353)
T 2g8s_A 227 PQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSV 306 (353)
T ss_dssp CCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEE
T ss_pred eccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEe
Confidence 111100 00000 000 01010111112234699999963 35899999999999999999
Q ss_pred cCCCCeEEEEEccccceeeccCCCCCcceEEEeee-CCEEEEE-eCCCcee
Q psy17325 398 DGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLE-NGMLYYS-TEGAEFL 446 (461)
Q Consensus 398 ~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~lYwt-d~~~~~i 446 (461)
+ .|.. ......... .+..|.+|++. +|.||++ |..+++|
T Consensus 307 ~-~~~~-~~~~~~~~~--------~~~rp~~v~~~pdG~lyv~td~~~g~I 347 (353)
T 2g8s_A 307 N-GDKV-TEDGRILTD--------RGQRIRDVRTGPDGYLYVLTDESSGEL 347 (353)
T ss_dssp E-TTEE-EEEEEESGG--------GCCCEEEEEECTTSCEEEEECSTTEEE
T ss_pred C-CCeE-eeeEEcccC--------CCCceeEEEECCCCcEEEEEeCCCCEE
Confidence 5 2321 111100000 01236777765 5789996 6566755
No 56
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.56 E-value=6.4e-12 Score=121.58 Aligned_cols=235 Identities=16% Similarity=0.125 Sum_probs=159.4
Q ss_pred ceeeeeeeecCCeEEEEeCC------CCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEe
Q psy17325 150 LVEGLAYDWIGGHIYWLDSR------LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIG 223 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~------~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~ 223 (461)
.|.++++++.++.||+++.. .+.|.+.++........+... ..|.++++++..+ ++|+++ .....|...+
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~--~l~v~~-~~~~~v~~~d 117 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQ--TLWFGN-TVNSAVTAID 117 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTT--EEEEEE-TTTTEEEEEE
T ss_pred CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCC--EEEEEe-cCCCEEEEEe
Confidence 57889999988999999976 678999998755443333322 4599999999877 899998 4456899998
Q ss_pred cCCCCcEEEEecc-c--------ccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcce
Q psy17325 224 MDGSNRSTIISTK-I--------YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294 (461)
Q Consensus 224 ~dG~~~~~i~~~~-~--------~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~ 294 (461)
+........+... . ..|.++++++.+++||+++...+ +
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~---------------------------------~ 164 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKE---------------------------------S 164 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSS---------------------------------C
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCC---------------------------------c
Confidence 8754433333221 1 13889999998999999884321 2
Q ss_pred eeeEEeCCCCceEEEEe-CCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeC----CCC
Q psy17325 295 KIGKANMDGSNASILVS-GQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST----KIY 368 (461)
Q Consensus 295 ~I~~~~~~g~~~~~l~~-~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~----~l~ 368 (461)
.|.+.++........+. ... |.+++++|.++.||+++.. +.|...++........+.. ...
T Consensus 165 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-------------~~i~~~d~~~~~~~~~~~~~~~~~~~ 231 (353)
T 3vgz_A 165 VIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNAD-------------GELITIDTADNKILSRKKLLDDGKEH 231 (353)
T ss_dssp EEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTT-------------SEEEEEETTTTEEEEEEECCCSSSCC
T ss_pred eEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCC-------------CeEEEEECCCCeEEEEEEcCCCCCCc
Confidence 46666665444433333 233 9999999999999987653 3555555433222222211 244
Q ss_pred CceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeCCCceee
Q psy17325 369 WPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447 (461)
Q Consensus 369 ~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~~~~~i~ 447 (461)
.|.++++++.+++||+++...+.|..+++. +|.....+.... +..++++.++++||+++..++.|.
T Consensus 232 ~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~-~~~~~~~~~~~~------------~~~~~~s~dg~~l~v~~~~~~~v~ 297 (353)
T 3vgz_A 232 FFINISLDTARQRAFITDSKAAEVLVVDTR-NGNILAKVAAPE------------SLAVLFNPARNEAYVTHRQAGKVS 297 (353)
T ss_dssp CEEEEEEETTTTEEEEEESSSSEEEEEETT-TCCEEEEEECSS------------CCCEEEETTTTEEEEEETTTTEEE
T ss_pred ccceEEECCCCCEEEEEeCCCCEEEEEECC-CCcEEEEEEcCC------------CceEEECCCCCEEEEEECCCCeEE
Confidence 678899999999999999988999999993 455433332211 123556666778999998777663
No 57
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.55 E-value=1.7e-12 Score=125.73 Aligned_cols=213 Identities=12% Similarity=0.085 Sum_probs=142.8
Q ss_pred cCccceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEec-CC----CCCceeEEEcCCCCceEEEEeecCCCCcEE
Q psy17325 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK-DN----ITQPRGMMLDPSPGTRWLFWTDWGENPRIE 220 (461)
Q Consensus 146 ~g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~-~~----~~~p~~ia~d~~~g~~~ly~td~~~~~~I~ 220 (461)
+....|.++++++. ++||+++...+.|.++++........+. .. ...|.+|+++ .+ +||+++++....|.
T Consensus 81 ~~~~~p~~i~~~~~-g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~--~~--~lyv~~~~~~~~v~ 155 (328)
T 3dsm_A 81 TGFTSPRYIHFLSD-EKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQY--GK--YVYVNCWSYQNRIL 155 (328)
T ss_dssp ECCSSEEEEEEEET-TEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEE--TT--EEEEEECTTCCEEE
T ss_pred CCCCCCcEEEEeCC-CeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEE--CC--EEEEEcCCCCCEEE
Confidence 34678999999765 5999999778999999987655433222 21 1279999994 56 99999975456899
Q ss_pred EEecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCce-eeecccceeeeeccceeeeEEEEEecCCCCcceeeeEE
Q psy17325 221 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF-IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKA 299 (461)
Q Consensus 221 ~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~-i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~ 299 (461)
++++........+.. -..|.+|++|+ .+++|++...... .. |. .. .+.|.+.
T Consensus 156 viD~~t~~~~~~i~~-g~~p~~i~~~~-dG~l~v~~~~~~~~~~--------------------~~-~~----~~~v~~i 208 (328)
T 3dsm_A 156 KIDTETDKVVDELTI-GIQPTSLVMDK-YNKMWTITDGGYEGSP--------------------YG-YE----APSLYRI 208 (328)
T ss_dssp EEETTTTEEEEEEEC-SSCBCCCEECT-TSEEEEEBCCBCTTCS--------------------SC-BC----CCEEEEE
T ss_pred EEECCCCeEEEEEEc-CCCccceEEcC-CCCEEEEECCCccCCc--------------------cc-cC----CceEEEE
Confidence 999875333222332 34799999997 5678888765300 00 00 00 0246777
Q ss_pred eCCCCceE-EEEeC-C-eeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeE--EEeeCCCCCceeEE
Q psy17325 300 NMDGSNAS-ILVSG-Q-LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS--TIISTKIYWPNGLT 374 (461)
Q Consensus 300 ~~~g~~~~-~l~~~-~-~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~--~l~~~~l~~p~gla 374 (461)
++...... .+... + .|++|+++|.++.||+++. .|++.+.+..... .++......|.||+
T Consensus 209 d~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~---------------~v~~~d~~t~~~~~~~~~~~~~~~p~gi~ 273 (328)
T 3dsm_A 209 DAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN---------------DIWRMPVEADRVPVRPFLEFRDTKYYGLT 273 (328)
T ss_dssp ETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS---------------SEEEEETTCSSCCSSCSBCCCSSCEEEEE
T ss_pred ECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc---------------EEEEEECCCCceeeeeeecCCCCceEEEE
Confidence 76543332 23221 2 2999999999999998743 5666666433221 12212257899999
Q ss_pred EecCCCeEEEEc----CCCCeEEEEEecCCCCeEEEE
Q psy17325 375 LDIATRRVYFAD----SKLDFIDFCNYDGTGRQQVIL 407 (461)
Q Consensus 375 iD~~~~~ly~~d----~~~~~I~~~~~~g~g~~~~~~ 407 (461)
+|+.+++||+++ ...++|.+++. +|.....+
T Consensus 274 vdp~~g~lyva~~~~y~~~~~V~v~d~--~g~~~~~i 308 (328)
T 3dsm_A 274 VNPNNGEVYVADAIDYQQQGIVYRYSP--QGKLIDEF 308 (328)
T ss_dssp ECTTTCCEEEEECTTSSSEEEEEEECT--TCCEEEEE
T ss_pred EcCCCCeEEEEcccccccCCEEEEECC--CCCEEEEE
Confidence 998899999999 77899999999 57665444
No 58
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.55 E-value=1.2e-11 Score=118.93 Aligned_cols=250 Identities=13% Similarity=0.094 Sum_probs=162.4
Q ss_pred EcCccceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcE-EEEecCCCCCcee-EEEcCCCCceEEEEeecCCCC--cEE
Q psy17325 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLAKDNITQPRG-MMLDPSPGTRWLFWTDWGENP--RIE 220 (461)
Q Consensus 145 ~~g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~-~~l~~~~~~~p~~-ia~d~~~g~~~ly~td~~~~~--~I~ 220 (461)
..+...| ++++++.++.||+++...++|.+.++..... ...+... ..|.. ++++|... +||.+. .... .|.
T Consensus 37 ~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~s~dg~--~l~~~~-~~~~~~~i~ 111 (331)
T 3u4y_A 37 TLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG-QSSMADVDITPDDQ--FAVTVT-GLNHPFNMQ 111 (331)
T ss_dssp ECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC-SSCCCCEEECTTSS--EEEECC-CSSSSCEEE
T ss_pred EccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC-CCCccceEECCCCC--EEEEec-CCCCcccEE
Confidence 3455567 9999998889999999999999999865553 3333322 45888 99999877 899544 3223 899
Q ss_pred EEecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCce-eeecccceeeeeccceeeeEEEEEecCCCCcceeeeEE
Q psy17325 221 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF-IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKA 299 (461)
Q Consensus 221 ~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~-i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~ 299 (461)
..+++.......+.. -..|.++++++.++.||+++...+. |. ++..
T Consensus 112 v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~--------------------------------~~~~ 158 (331)
T 3u4y_A 112 SYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVR--------------------------------RFKI 158 (331)
T ss_dssp EEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEE--------------------------------EEEE
T ss_pred EEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEE--------------------------------EEEE
Confidence 999875544333332 3578999999988889999876543 32 2223
Q ss_pred eCCCCce---EEEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCe---EEEeeCCCCCcee
Q psy17325 300 NMDGSNA---SILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNR---STIISTKIYWPNG 372 (461)
Q Consensus 300 ~~~g~~~---~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~---~~l~~~~l~~p~g 372 (461)
+.+|... ...+.... |.+++++|.++.||++... .+.|...++..... ...+ ..-..|.+
T Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~------------~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~ 225 (331)
T 3u4y_A 159 DADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLI------------GNSIGILETQNPENITLLNAV-GTNNLPGT 225 (331)
T ss_dssp CTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETT------------TTEEEEEECSSTTSCEEEEEE-ECSSCCCC
T ss_pred CCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCC------------CCeEEEEECCCCcccceeeec-cCCCCCce
Confidence 2223221 11222222 9999999998889998776 56777777653332 2222 23478999
Q ss_pred EEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeCCCceee
Q psy17325 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447 (461)
Q Consensus 373 laiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~~~~~i~ 447 (461)
++++++++.||++....+.|..+++. +|.. ..+......+...-........++++.++.+||++....+.|+
T Consensus 226 ~~~spdg~~l~v~~~~~~~i~~~d~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~ 298 (331)
T 3u4y_A 226 IVVSRDGSTVYVLTESTVDVFNFNQL-SGTL-SFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELK 298 (331)
T ss_dssp EEECTTSSEEEEECSSEEEEEEEETT-TTEE-EEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEE
T ss_pred EEECCCCCEEEEEEcCCCEEEEEECC-CCce-eeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEE
Confidence 99998888899999888899999982 3443 2222111110000000000123577788889999998887764
No 59
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.54 E-value=8e-12 Score=120.80 Aligned_cols=262 Identities=18% Similarity=0.139 Sum_probs=159.8
Q ss_pred eEEEcCccceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEe------cCCCCCceeEEEcCC---CCceEEEEee
Q psy17325 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLA------KDNITQPRGMMLDPS---PGTRWLFWTD 212 (461)
Q Consensus 142 ~~~~~g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~------~~~~~~p~~ia~d~~---~g~~~ly~td 212 (461)
.++..+|..|.+|++.+ .+.||+++...++|.+++.++...+.+. ......|.|||++|. ++ +||++.
T Consensus 25 ~~va~gL~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g--~lYv~y 101 (347)
T 3das_A 25 RTVATGLNSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDH--MVYAYF 101 (347)
T ss_dssp EEEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHC--EEEEEE
T ss_pred EEeecCCCCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCC--EEEEEE
Confidence 35788999999999996 4679999998899999987644433331 123456899999995 67 888864
Q ss_pred c-CCCCcEEEEecCCC--------CcEEEEec----ccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceee
Q psy17325 213 W-GENPRIERIGMDGS--------NRSTIIST----KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIF 279 (461)
Q Consensus 213 ~-~~~~~I~~~~~dG~--------~~~~i~~~----~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~ 279 (461)
. ....+|.|..+++. ..++|+.. ....+..|++++ .++||++..........
T Consensus 102 t~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgp-DG~Lyvt~Gd~~~~~~~-------------- 166 (347)
T 3das_A 102 TSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGP-DKMLYAGTGESGDTGLS-------------- 166 (347)
T ss_dssp ECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECT-TSCEEEECBCTTCGGGT--------------
T ss_pred ecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCC-CCCEEEEECCCCCCccc--------------
Confidence 2 23468999998872 23455432 234567799997 56899986433211000
Q ss_pred eEEEEEecCCCCcceeeeEEeCCCC--------ceEEEEeCCe--eeeEEEeccCCeEEEeecCce--eeEEEeecCCC-
Q psy17325 280 RKLYWIDEGGNGVPLKIGKANMDGS--------NASILVSGQL--YEALALDLENGMLYYSTLKCT--RWLFWTDWGEN- 346 (461)
Q Consensus 280 ~~~yw~d~~~~~~~~~I~~~~~~g~--------~~~~l~~~~~--p~~iavd~~~~~lY~t~~~~~--~~l~~~d~~~~- 346 (461)
+......++|.|+++||+ ..++.. .++ |.+|++|| .|.||+++.+.. ..|.....|.+
T Consensus 167 -------qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a-~G~RNp~Gla~dp-~G~L~~~d~g~~~~deln~i~~G~ny 237 (347)
T 3das_A 167 -------QDRKSLGGKILRMTPDGEPAPGNPFPGSPVYS-YGHRNVQGLAWDD-KQRLFASEFGQDTWDELNAIKPGDNY 237 (347)
T ss_dssp -------TCTTCSTTCEEEECTTSSBCTTCSSTTCCEEE-BCCSBCCEEEECT-TCCEEEEECCSSSCEEEEEECTTCBC
T ss_pred -------cCCCCCCCEEEEEeCCCCccCCCCCCCCeEEe-eCCCCcceEEECC-CCCEEEEecCCCCCceeeEEcCCCEe
Confidence 000001157999999998 444444 345 99999999 689999987611 11111111100
Q ss_pred --CceEE-EeecCCCeEEE-eeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCC--eEEEEEccccceeeccCC
Q psy17325 347 --PRIER-IGMDGSNRSTI-ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGR--QQVILIDLMVEFTNDLMG 420 (461)
Q Consensus 347 --~~I~~-~~~dG~~~~~l-~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~--~~~~~~~~~~~~~~~~~~ 420 (461)
+.++- ....+...-++ .......|.||++ .++.+|.+.....+|.++.+++.+. ....++...
T Consensus 238 GwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~--~~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~--------- 306 (347)
T 3das_A 238 GWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAY--AEGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGE--------- 306 (347)
T ss_dssp CTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEE--ETTEEEEEESTTCSEEEEEEETTEESSCCEEESTTT---------
T ss_pred cCCcccCCCCCccccCCcEecCCCCCCCcceEE--EcCceeeccccCCEEEEEEecCCceecceEEeecCC---------
Confidence 00000 00001111111 1123347999999 6899999999999999999954331 111222211
Q ss_pred CCCcceEEEeee-CCEEEEEeCCC
Q psy17325 421 DNGVPALALDLE-NGMLYYSTEGA 443 (461)
Q Consensus 421 ~~~~~~~~l~~~-~~~lYwtd~~~ 443 (461)
.-.+.++++. +|.||+++.+.
T Consensus 307 --~gR~~dv~~~pDG~lyv~td~~ 328 (347)
T 3das_A 307 --YGRLRTVAPAGGDKLWLVTSNT 328 (347)
T ss_dssp --SSCEEEEEEEETTEEEEEECTT
T ss_pred --CCCccEEEECCCCcEEEEEcCC
Confidence 1125677664 68999986544
No 60
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.53 E-value=3.4e-13 Score=131.49 Aligned_cols=196 Identities=14% Similarity=0.244 Sum_probs=134.4
Q ss_pred CccceeeeeeeecCCeEEEEeCC-----CCeEEEEeCC-CCcEEEEe-cCC----CCCceeEEEcCCCCceEEEEeecC-
Q psy17325 147 GLDLVEGLAYDWIGGHIYWLDSR-----LNRIEVCDEN-GTNRIVLA-KDN----ITQPRGMMLDPSPGTRWLFWTDWG- 214 (461)
Q Consensus 147 g~~~p~~iavd~~~~~ly~~d~~-----~~~I~~~~~~-G~~~~~l~-~~~----~~~p~~ia~d~~~g~~~ly~td~~- 214 (461)
.+..|.+|++|.. ++|||+|.. .++|.+.++. |+....+. ... ...|.+|++|+..| .+|++|.+
T Consensus 65 ~~~~p~gv~~d~~-g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g--~~yvtd~~~ 141 (343)
T 2qe8_A 65 TFDTVLGIKSDGN-GIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHN--FVYISDPAP 141 (343)
T ss_dssp CCSCEEEEEECSS-SEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTT--EEEEEECCS
T ss_pred ceeEeeEEEEcCC-CcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCC--EEEEEcCcc
Confidence 5678999999975 789999987 5899999986 54333332 111 23579999999888 99999942
Q ss_pred -CCCcEEEEecCCCCcEEEEec--------------c---------------cccceeEEeeccCCeeEEecCCCceeee
Q psy17325 215 -ENPRIERIGMDGSNRSTIIST--------------K---------------IYWPNGLTLDIATRRVYFADSKLDFIDC 264 (461)
Q Consensus 215 -~~~~I~~~~~dG~~~~~i~~~--------------~---------------~~~P~glavD~~~~~ly~~d~~~~~i~~ 264 (461)
....|.+.+++......++.. + ...|+||++++.++.||+++.....
T Consensus 142 ~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~--- 218 (343)
T 2qe8_A 142 DDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTS--- 218 (343)
T ss_dssp GGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSE---
T ss_pred CCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCe---
Confidence 446888888763322222210 0 0247999999988889999876643
Q ss_pred cccceeeeeccceeeeEEEEEecCCCCcceeeeEEeC----CCC--------ceEEEEeCCeeeeEEEeccCCeEEEeec
Q psy17325 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM----DGS--------NASILVSGQLYEALALDLENGMLYYSTL 332 (461)
Q Consensus 265 ~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~----~g~--------~~~~l~~~~~p~~iavd~~~~~lY~t~~ 332 (461)
|++.+. ++. ....+.....|.||++|+ +|+||+++.
T Consensus 219 -------------------------------l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~-~G~l~va~~ 266 (343)
T 2qe8_A 219 -------------------------------MYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDK-DHNIYVGDL 266 (343)
T ss_dssp -------------------------------EEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECT-TCCEEEEEG
T ss_pred -------------------------------EEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECC-CCCEEEEcc
Confidence 333332 111 012222222399999997 588999988
Q ss_pred CceeeEEEeecCCCCceEEEee-cCCCeEEEee-CCCCCceeEEEecCCCeEEEEcCCCCeEEE
Q psy17325 333 KCTRWLFWTDWGENPRIERIGM-DGSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLDFIDF 394 (461)
Q Consensus 333 ~~~~~l~~~d~~~~~~I~~~~~-dG~~~~~l~~-~~l~~p~glaiD~~~~~ly~~d~~~~~I~~ 394 (461)
. .++|.+.+. +|+. ..++. ..+.+|.+|+++. +++||+++...+++..
T Consensus 267 ~------------~~~V~~~d~~~G~~-~~~~~~~~~~~p~~va~~~-~g~l~v~~~~~~~~~~ 316 (343)
T 2qe8_A 267 A------------HSAIGVITSADRAY-KLLVTDEKLSWTDSFNFGS-DGYLYFDCNQLHHSAP 316 (343)
T ss_dssp G------------GTEEEEEETTTTEE-EEEEECGGGSCEEEEEECT-TSCEEEEECCGGGSGG
T ss_pred C------------CCeEEEEECCCCCE-EEEEECCceecCCeeEECC-CCcEEEEeCccccccc
Confidence 7 788999998 7753 33442 3488999999995 5899999887665543
No 61
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.52 E-value=8.8e-13 Score=129.06 Aligned_cols=227 Identities=18% Similarity=0.135 Sum_probs=140.3
Q ss_pred EEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEE-----ecccccceeEEeecc---CCeeEEec
Q psy17325 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII-----STKIYWPNGLTLDIA---TRRVYFAD 256 (461)
Q Consensus 185 ~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~-----~~~~~~P~glavD~~---~~~ly~~d 256 (461)
.++...+..|++|+++|. | .||+++.. .+|.+++.+|. +.+. ..+...|.||++++. +++||+++
T Consensus 22 ~~va~~l~~P~~ia~~pd-G--~l~V~e~~--g~I~~~d~~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~ 94 (354)
T 3a9g_A 22 SEVASDLEVPWSIAPLGG-G--RYLVTERP--GRLVLISPSGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYA 94 (354)
T ss_dssp EEEECSCSCEEEEEEEET-T--EEEEEETT--TEEEEECSSCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEE
T ss_pred EEEeCCCCCCeEEEEcCC-C--eEEEEeCC--CEEEEEeCCCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEE
Confidence 344557889999999986 6 79999943 79999987776 3332 224567999999987 79999987
Q ss_pred CC---CceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCC-----ceEEEEeC----Ce--eeeEEEec
Q psy17325 257 SK---LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS-----NASILVSG----QL--YEALALDL 322 (461)
Q Consensus 257 ~~---~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~-----~~~~l~~~----~~--p~~iavd~ 322 (461)
.. .+.. ..+|.+.++++. ..++++.. .. +.+|+++|
T Consensus 95 ~~~~~~~~~------------------------------~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p 144 (354)
T 3a9g_A 95 SYFAEGGHI------------------------------RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP 144 (354)
T ss_dssp EEECGGGCE------------------------------EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT
T ss_pred eccCCCCCc------------------------------ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC
Confidence 63 1000 025777777665 23444331 11 88999998
Q ss_pred cCCeEEEeecCceeeEEE-eec-CCCCceEEEeecCC--------CeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeE
Q psy17325 323 ENGMLYYSTLKCTRWLFW-TDW-GENPRIERIGMDGS--------NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392 (461)
Q Consensus 323 ~~~~lY~t~~~~~~~l~~-~d~-~~~~~I~~~~~dG~--------~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I 392 (461)
.|+||++....... .+ .|. ...++|.|++.||+ ..+++. ..+..|.||++|+.+++||++|.+.+..
T Consensus 145 -DG~Lyvt~G~~~~~-~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a-~G~rnp~Gla~d~~~g~l~v~d~g~~~~ 221 (354)
T 3a9g_A 145 -DGMLYITTGDAADP-RLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWS-YGHRNPQGIDWHRASGVMVATEHGPVGH 221 (354)
T ss_dssp -TSCEEEECCCTTCG-GGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEE-ECCSCCCEEEECTTTCCEEEEECCSSSC
T ss_pred -CCcEEEEECCCCCC-ccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEE-EccCCcceEEEeCCCCCEEEEecCCCCC
Confidence 56899986431000 00 000 12468999999997 445554 7899999999998799999999987653
Q ss_pred EEEEecCCCCeEE---EEE-ccccceeeccC--CCCCcceEEEee--------eCCEEEEEeCCCcee-eccee
Q psy17325 393 DFCNYDGTGRQQV---ILI-DLMVEFTNDLM--GDNGVPALALDL--------ENGMLYYSTEGAEFL-KTPLF 451 (461)
Q Consensus 393 ~~~~~~g~g~~~~---~~~-~~~~~~~~~~~--~~~~~~~~~l~~--------~~~~lYwtd~~~~~i-~~~~~ 451 (461)
..++.-..|.+-- ... ....++...+. +.....|.++++ ..+.||+++...+.| ++.+.
T Consensus 222 dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~ 295 (354)
T 3a9g_A 222 DEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFG 295 (354)
T ss_dssp CEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEEC
T ss_pred cEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEEC
Confidence 3333211232100 000 00000000000 011123677877 578999999999777 44444
No 62
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.52 E-value=4e-12 Score=121.12 Aligned_cols=208 Identities=13% Similarity=0.084 Sum_probs=138.3
Q ss_pred EEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceee
Q psy17325 184 IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFID 263 (461)
Q Consensus 184 ~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~ 263 (461)
+.++.....-+.|.+.++..+ .|||+| ....+|++.+.++.....+.. -..|.+|++++. ++||++..
T Consensus 5 ~~~~~~~~~~~Egp~w~~~~~--~l~~~d-~~~~~i~~~d~~~~~~~~~~~--~~~~~~i~~~~d-G~l~v~~~------ 72 (297)
T 3g4e_A 5 ECVLPENCRCGESPVWEEVSN--SLLFVD-IPAKKVCRWDSFTKQVQRVTM--DAPVSSVALRQS-GGYVATIG------ 72 (297)
T ss_dssp EEEECCCCSBEEEEEEETTTT--EEEEEE-TTTTEEEEEETTTCCEEEEEC--SSCEEEEEEBTT-SSEEEEET------
T ss_pred EEEeccCCccccCCeEECCCC--EEEEEE-CCCCEEEEEECCCCcEEEEeC--CCceEEEEECCC-CCEEEEEC------
Confidence 345555556799999999888 999999 456799999998765543322 357999999975 45777652
Q ss_pred ecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCC-----e-eeeEEEeccCCeEEEeecCceee
Q psy17325 264 CKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ-----L-YEALALDLENGMLYYSTLKCTRW 337 (461)
Q Consensus 264 ~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~-----~-p~~iavd~~~~~lY~t~~~~~~~ 337 (461)
..|.+.++++...+.+.... . |+++++|+. |+||+++.....
T Consensus 73 ------------------------------~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~d-G~l~~~~~~~~~- 120 (297)
T 3g4e_A 73 ------------------------------TKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPA-GRYFAGTMAEET- 120 (297)
T ss_dssp ------------------------------TEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTT-SCEEEEEEECCS-
T ss_pred ------------------------------CeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCC-CCEEEecCCccc-
Confidence 13677777655555554321 2 899999985 568887532000
Q ss_pred EEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEec-CCCCe--EEEEEccccce
Q psy17325 338 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD-GTGRQ--QVILIDLMVEF 414 (461)
Q Consensus 338 l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~-g~g~~--~~~~~~~~~~~ 414 (461)
.....-...++|++.+.+|+... +. ..+..|+||+++++++.|||+|...++|.+++++ .+|.. +.++.......
T Consensus 121 ~~~~~~~~~~~l~~~d~~g~~~~-~~-~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~ 198 (297)
T 3g4e_A 121 APAVLERHQGALYSLFPDHHVKK-YF-DQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEE 198 (297)
T ss_dssp BTTBCCTTCEEEEEECTTSCEEE-EE-EEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGG
T ss_pred ccccccCCCcEEEEEECCCCEEE-Ee-eccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCC
Confidence 00000012457999888875433 33 6678899999998888999999999999999985 35542 22332211111
Q ss_pred eeccCCCCCcceEEEeee-CCEEEEEeCCCcee
Q psy17325 415 TNDLMGDNGVPALALDLE-NGMLYYSTEGAEFL 446 (461)
Q Consensus 415 ~~~~~~~~~~~~~~l~~~-~~~lYwtd~~~~~i 446 (461)
..|.+++++ +|+||++.+..+.|
T Consensus 199 ---------~~p~g~~~d~~G~lwva~~~~~~v 222 (297)
T 3g4e_A 199 ---------QIPDGMCIDAEGKLWVACYNGGRV 222 (297)
T ss_dssp ---------CEEEEEEEBTTSCEEEEEETTTEE
T ss_pred ---------CCCCeeEECCCCCEEEEEcCCCEE
Confidence 125677775 57999999877655
No 63
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.50 E-value=6.6e-12 Score=121.80 Aligned_cols=241 Identities=12% Similarity=0.075 Sum_probs=152.1
Q ss_pred CccceeeeeeeecCCeEEEEeCC--CCeEEEEeCCCCcEEEEec--CCCCCceeEEEcCCCCceEEEEeecCCCCcEEEE
Q psy17325 147 GLDLVEGLAYDWIGGHIYWLDSR--LNRIEVCDENGTNRIVLAK--DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI 222 (461)
Q Consensus 147 g~~~p~~iavd~~~~~ly~~d~~--~~~I~~~~~~G~~~~~l~~--~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~ 222 (461)
....|.++++++.++ ||+++.. .+.|.+.++++...+.+.. .....|.+|+++|... +||+++. ....|...
T Consensus 38 ~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~--~l~~~~~-~~~~v~v~ 113 (347)
T 3hfq_A 38 ATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQ--LVYSANY-HKGTAEVM 113 (347)
T ss_dssp ECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTT--EEEEEET-TTTEEEEE
T ss_pred ccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCC--EEEEEeC-CCCEEEEE
Confidence 346799999998555 9999864 6789999986654333321 2236799999999977 9999983 34566666
Q ss_pred ecC--CCCcEEEEec-----------ccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCC
Q psy17325 223 GMD--GSNRSTIIST-----------KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289 (461)
Q Consensus 223 ~~d--G~~~~~i~~~-----------~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~ 289 (461)
+++ |... .+... ....|.++++++.++ ||+++...+.
T Consensus 114 ~~~~~g~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~---------------------------- 163 (347)
T 3hfq_A 114 KIAADGALT-LTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDK---------------------------- 163 (347)
T ss_dssp EECTTSCEE-EEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTE----------------------------
T ss_pred EeCCCCCee-ecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCE----------------------------
Confidence 654 3322 22111 112477899998766 9999887754
Q ss_pred CCcceeeeEEeCC--CCceEEE---EeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecC--CCeEE
Q psy17325 290 NGVPLKIGKANMD--GSNASIL---VSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG--SNRST 361 (461)
Q Consensus 290 ~~~~~~I~~~~~~--g~~~~~l---~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG--~~~~~ 361 (461)
|.+.+++ |....+. ..... |++++++|.++.||+++.. .+.|...+++. ...+.
T Consensus 164 ------v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~------------~~~v~v~~~~~~~g~~~~ 225 (347)
T 3hfq_A 164 ------VYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGEL------------SSQIASLKYDTQTGAFTQ 225 (347)
T ss_dssp ------EEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT------------TTEEEEEEEETTTTEEEE
T ss_pred ------EEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCC------------CCEEEEEEecCCCCceEE
Confidence 3333333 3322111 11122 8999999988889998776 55666666653 11111
Q ss_pred E--eeC------CCCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeC
Q psy17325 362 I--IST------KIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLEN 433 (461)
Q Consensus 362 l--~~~------~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 433 (461)
+ +.. ....|.++++++++++||+++...+.|..++++.+|....+......+. .+..++++.++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~--------~~~~~~~spdg 297 (347)
T 3hfq_A 226 LGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGD--------FPRDFDLDPTE 297 (347)
T ss_dssp EEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSS--------CCCEEEECTTS
T ss_pred eeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCC--------CcCeEEECCCC
Confidence 1 111 1145889999988889999998889999999853443322211111011 12245566667
Q ss_pred CEEEEEeCCCceee
Q psy17325 434 GMLYYSTEGAEFLK 447 (461)
Q Consensus 434 ~~lYwtd~~~~~i~ 447 (461)
.+||+++..++.|+
T Consensus 298 ~~l~v~~~~~~~v~ 311 (347)
T 3hfq_A 298 AFVVVVNQNTDNAT 311 (347)
T ss_dssp SEEEEEETTTTEEE
T ss_pred CEEEEEEcCCCcEE
Confidence 78999999887664
No 64
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.50 E-value=1.9e-11 Score=117.38 Aligned_cols=230 Identities=8% Similarity=-0.025 Sum_probs=153.6
Q ss_pred eeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCc-EEEEe
Q psy17325 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR-STIIS 234 (461)
Q Consensus 156 vd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~-~~i~~ 234 (461)
++...+.+|+++...+.|.+.+++.......+......| +++++|... +||++. .....|+..++..... ...+.
T Consensus 5 ~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~--~l~~~~-~~~~~i~~~d~~~~~~~~~~~~ 80 (331)
T 3u4y_A 5 FQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCS--NVVVTS-DFCQTLVQIETQLEPPKVVAIQ 80 (331)
T ss_dssp --CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSC--EEEEEE-STTCEEEEEECSSSSCEEEEEE
T ss_pred EcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCC--EEEEEe-CCCCeEEEEECCCCceeEEecc
Confidence 445578899999999999999987555444444444557 999999877 899998 4456999999976554 33333
Q ss_pred ccccccee-EEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCC
Q psy17325 235 TKIYWPNG-LTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ 313 (461)
Q Consensus 235 ~~~~~P~g-lavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~ 313 (461)
. ...|.. +++++.++.||........ ..|.+.+++.......+...
T Consensus 81 ~-~~~~~~~~~~s~dg~~l~~~~~~~~~--------------------------------~~i~v~d~~~~~~~~~~~~~ 127 (331)
T 3u4y_A 81 E-GQSSMADVDITPDDQFAVTVTGLNHP--------------------------------FNMQSYSFLKNKFISTIPIP 127 (331)
T ss_dssp E-CSSCCCCEEECTTSSEEEECCCSSSS--------------------------------CEEEEEETTTTEEEEEEECC
T ss_pred c-CCCCccceEECCCCCEEEEecCCCCc--------------------------------ccEEEEECCCCCeEEEEECC
Confidence 2 456888 9999988889944433210 14666676654443333333
Q ss_pred e-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCc-eEEEeecCCCe-----EEEeeCCCCCceeEEEecCCCeEEEEc
Q psy17325 314 L-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPR-IERIGMDGSNR-----STIISTKIYWPNGLTLDIATRRVYFAD 386 (461)
Q Consensus 314 ~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~-I~~~~~dG~~~-----~~l~~~~l~~p~glaiD~~~~~ly~~d 386 (461)
. |.+++++|.++.||+++.. ... |...+++.... ...+ .....|.++++++++++||+++
T Consensus 128 ~~~~~~~~spdg~~l~~~~~~------------~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~ 194 (331)
T 3u4y_A 128 YDAVGIAISPNGNGLILIDRS------------SANTVRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVAN 194 (331)
T ss_dssp TTEEEEEECTTSSCEEEEEET------------TTTEEEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEE
T ss_pred CCccceEECCCCCEEEEEecC------------CCceEEEEEECCCCcEeecCCccc-cCCCCccceEECCCCCEEEEEe
Confidence 3 9999999998889988765 445 55555443221 1122 3455699999998888899999
Q ss_pred CCCCeEEEEEecCCCCe---EEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeCCCceee
Q psy17325 387 SKLDFIDFCNYDGTGRQ---QVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447 (461)
Q Consensus 387 ~~~~~I~~~~~~g~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~~~~~i~ 447 (461)
...+.|..+++. ++.. ...+... . .+..++++.++.+||++....+.|.
T Consensus 195 ~~~~~v~v~d~~-~~~~~~~~~~~~~~---~--------~~~~~~~spdg~~l~v~~~~~~~i~ 246 (331)
T 3u4y_A 195 LIGNSIGILETQ-NPENITLLNAVGTN---N--------LPGTIVVSRDGSTVYVLTESTVDVF 246 (331)
T ss_dssp TTTTEEEEEECS-STTSCEEEEEEECS---S--------CCCCEEECTTSSEEEEECSSEEEEE
T ss_pred CCCCeEEEEECC-CCcccceeeeccCC---C--------CCceEEECCCCCEEEEEEcCCCEEE
Confidence 999999999994 4554 2222211 1 1224556666777888887766553
No 65
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=99.49 E-value=1.2e-14 Score=115.99 Aligned_cols=90 Identities=36% Similarity=0.784 Sum_probs=41.9
Q ss_pred CCCCCCCCCCCCCCcccCCCCCCCCCceeCCCCceEeCCCCCeecCCCCceecCcceecCCcccCceeeccCCccccCCC
Q psy17325 18 CPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNE 97 (461)
Q Consensus 18 C~dg~de~~~C~~~~C~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~~C~~~~g~~~C~C~~ 97 (461)
..+++.. ..|+++||..++..|.+.|.+.+++|.|.|++||.+. ++..|++++||.....|.+.|.|+.++|.|.|++
T Consensus 18 ~~~~~~~-~~Cd~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy~g~-~g~~C~dideC~~~~~C~~~C~n~~gsy~C~C~~ 95 (107)
T 2w2n_E 18 TENLYFQ-GAMGTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLV-AQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEE 95 (107)
T ss_dssp --CCCCS-CCBSCCGGGTGGGGCSSEEECCSBSCEEECCTTCEEE-TTTEEEC---------------------------
T ss_pred cCCCcCC-CCCcCccCcCCCCCCCCEeEeCCCCeEEECCCCcccc-CCCccccccccCCCCCcCCeeecCCCCEEEECCC
Confidence 4445533 5799999998888899999999999999999999874 5789999999986568999999999999999999
Q ss_pred CeeeeCCCCcee
Q psy17325 98 GYVLEYDNHTCK 109 (461)
Q Consensus 98 g~~l~~~~~~C~ 109 (461)
||.+..++++|+
T Consensus 96 Gy~~~~d~~~C~ 107 (107)
T 2w2n_E 96 GFQLDPHTKACK 107 (107)
T ss_dssp ------------
T ss_pred CceECCCCCccC
Confidence 999988887773
No 66
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.49 E-value=1.4e-11 Score=114.05 Aligned_cols=198 Identities=12% Similarity=0.150 Sum_probs=139.4
Q ss_pred cceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCC
Q psy17325 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228 (461)
Q Consensus 149 ~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~ 228 (461)
..+.||++|+.++.||.+....++|.+.+++|.....+...+...+.||++++. | .+++++ ....++....++...
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~-g--~~~vs~-E~~~~l~~~~v~~~~ 102 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGD-N--QFVISD-ERDYAIYVISLTPNS 102 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEECST-T--EEEEEE-TTTTEEEEEEECTTC
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeCC-C--EEEEEE-CCCCcEEEEEcCCCC
Confidence 468999999988999986666899999999998877775556678999999964 5 577776 344688887776443
Q ss_pred c-EEEEec--cc-ccc-----eeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEE
Q psy17325 229 R-STIIST--KI-YWP-----NGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKA 299 (461)
Q Consensus 229 ~-~~i~~~--~~-~~P-----~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~ 299 (461)
. ..+-.. .+ ..| .|||+|+.+++||.+...... .|+..
T Consensus 103 ~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~---------------------------------~i~~~ 149 (255)
T 3qqz_A 103 EVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPI---------------------------------EVYKV 149 (255)
T ss_dssp CEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSE---------------------------------EEEEE
T ss_pred eeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCc---------------------------------eEEEE
Confidence 2 111111 11 234 899999999999998765531 23333
Q ss_pred e--CCCCceEEEEe------CCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEee-----
Q psy17325 300 N--MDGSNASILVS------GQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS----- 364 (461)
Q Consensus 300 ~--~~g~~~~~l~~------~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~----- 364 (461)
+ +.+....++.. ..+ +.+|++||..++||+.... +..|..++.+|..+..+..
T Consensus 150 ~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~------------s~~L~~~d~~g~~~~~~~L~~g~~ 217 (255)
T 3qqz_A 150 NGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHE------------SRALQEVTLVGEVIGEMSLTKGSR 217 (255)
T ss_dssp ESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETT------------TTEEEEECTTCCEEEEEECSTTGG
T ss_pred cccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECC------------CCeEEEEcCCCCEEEEEEcCCccC
Confidence 3 11112222211 011 8999999999999998776 7788888888874444431
Q ss_pred ---CCCCCceeEEEecCCCeEEEEcCCCCeEEEEEe
Q psy17325 365 ---TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397 (461)
Q Consensus 365 ---~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~ 397 (461)
..+.+|.|||+| .+|+||++... +.++++..
T Consensus 218 ~l~~~~~qpEGia~d-~~G~lyIvsE~-n~~y~f~~ 251 (255)
T 3qqz_A 218 GLSHNIKQAEGVAMD-ASGNIYIVSEP-NRFYRFTP 251 (255)
T ss_dssp GCSSCCCSEEEEEEC-TTCCEEEEETT-TEEEEEEC
T ss_pred CcccccCCCCeeEEC-CCCCEEEEcCC-ceEEEEEe
Confidence 236799999999 46789999655 68999887
No 67
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.47 E-value=1.9e-12 Score=126.62 Aligned_cols=213 Identities=20% Similarity=0.240 Sum_probs=134.0
Q ss_pred EcCccceeeeeeeec---CCeEEEEeCCC-----CeEEEEeCCCC---cEEEEec------CCCCCceeEEEcCCCCceE
Q psy17325 145 VSGLDLVEGLAYDWI---GGHIYWLDSRL-----NRIEVCDENGT---NRIVLAK------DNITQPRGMMLDPSPGTRW 207 (461)
Q Consensus 145 ~~g~~~p~~iavd~~---~~~ly~~d~~~-----~~I~~~~~~G~---~~~~l~~------~~~~~p~~ia~d~~~g~~~ 207 (461)
..+...|.|||+++. ++.||+++... ++|.+.+.++. ..++++. .....|.+|+++|. | +
T Consensus 71 ~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pd-G--~ 147 (352)
T 2ism_A 71 HRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPD-G--M 147 (352)
T ss_dssp CSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTT-S--C
T ss_pred ecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCC-C--C
Confidence 345678999999987 78999999864 78999998764 2233322 23457899999995 6 7
Q ss_pred EEEeecCC-------------CCcEEEEecCCCC------------cEEEEecccccceeEEeeccCCeeEEecCCCcee
Q psy17325 208 LFWTDWGE-------------NPRIERIGMDGSN------------RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262 (461)
Q Consensus 208 ly~td~~~-------------~~~I~~~~~dG~~------------~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i 262 (461)
||+++ +. ..+|.|++.+|+. ...+...++..|.||++|+.+++||++|...+.+
T Consensus 148 Lyv~~-G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~ 226 (352)
T 2ism_A 148 LYVTT-GEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGE 226 (352)
T ss_dssp EEEEC-CCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC---
T ss_pred EEEEE-CCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCC
Confidence 99997 32 2589999999831 2234556788999999999889999999876542
Q ss_pred eecccceeeeeccceeeeEEEEEecCCC-CcceeeeEEeCCCC-ceEEEEeCCe-eeeEEEeccCCeEEEeecCceeeEE
Q psy17325 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGN-GVPLKIGKANMDGS-NASILVSGQL-YEALALDLENGMLYYSTLKCTRWLF 339 (461)
Q Consensus 263 ~~~~~~~~~~v~~~~~~~~~yw~d~~~~-~~~~~I~~~~~~g~-~~~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~ 339 (461)
.... ...|.....+.. |.+.........+. .....+.... |.||++ ..|.||+++..
T Consensus 227 ~~~~------------~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~--~~G~l~v~~~~------ 286 (352)
T 2ism_A 227 QGYG------------HDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAF--FRGDLYVAGLR------ 286 (352)
T ss_dssp ---C------------CCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEE--ETTEEEEEETT------
T ss_pred CCCC------------CeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEE--ECCEEEEEECC------
Confidence 1000 001111111111 11100000000000 1111111122 899999 47888888776
Q ss_pred EeecCCCCceEEEeecCCC-------eEEEeeCCCCCceeEEEecCCCeEEEEcCCC
Q psy17325 340 WTDWGENPRIERIGMDGSN-------RSTIISTKIYWPNGLTLDIATRRVYFADSKL 389 (461)
Q Consensus 340 ~~d~~~~~~I~~~~~dG~~-------~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~ 389 (461)
..+|.++.+++.. .+.++ .....|.+|++++ ++.||+++...
T Consensus 287 ------~~~v~~v~~~~~~~~~~~~~~~~~~-~~~~rp~~v~~~p-dG~lyv~~~~~ 335 (352)
T 2ism_A 287 ------GQALLRLVLEGERGRWRVLRVETAL-SGFGRLREVQVGP-DGALYVTTSNR 335 (352)
T ss_dssp ------TTEEEEEEEEEETTEEEEEEEEEEE-ESSCCEEEEEECT-TSCEEEEECST
T ss_pred ------CCEEEEEEECCCCcceeecchheec-ccCCCeeEEEECC-CCcEEEEEeCC
Confidence 7889999887554 23344 4567899999995 57999998753
No 68
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.46 E-value=1.2e-11 Score=117.34 Aligned_cols=201 Identities=17% Similarity=0.163 Sum_probs=132.0
Q ss_pred CCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccc
Q psy17325 189 DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268 (461)
Q Consensus 189 ~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~ 268 (461)
.....|.++++||..+ .|||++ ....+|.+.+.++. .+.+ ......|.+|++|+ .++||+++....
T Consensus 25 ~~~~~~eg~~~d~~g~--~l~~~~-~~~~~i~~~~~~~~-~~~~-~~~~~~~~~l~~~~-dg~l~v~~~~~~-------- 90 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARS--AVIFSD-VRQNRTWAWSDDGQ-LSPE-MHPSHHQNGHCLNK-QGHLIACSHGLR-------- 90 (296)
T ss_dssp CCCSSEEEEEEEGGGT--EEEEEE-GGGTEEEEEETTSC-EEEE-ESSCSSEEEEEECT-TCCEEEEETTTT--------
T ss_pred cCCccccCCeEeCCCC--EEEEEe-CCCCEEEEEECCCC-eEEE-ECCCCCcceeeECC-CCcEEEEecCCC--------
Confidence 4456799999999866 799999 45579999999987 4443 33456799999997 567888887653
Q ss_pred eeeeeccceeeeEEEEEecCCCCcceeeeEEeC-CCCceEEEEe--CCe----eeeEEEeccCCeEEEeecCceeeEE-E
Q psy17325 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM-DGSNASILVS--GQL----YEALALDLENGMLYYSTLKCTRWLF-W 340 (461)
Q Consensus 269 ~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~-~g~~~~~l~~--~~~----p~~iavd~~~~~lY~t~~~~~~~l~-~ 340 (461)
.|.+.++ +|+. +.+.. ... |++|++|+ .|+||+|+.. .+.+- +
T Consensus 91 --------------------------~i~~~d~~~g~~-~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~-~g~~~~~ 141 (296)
T 3e5z_A 91 --------------------------RLERQREPGGEW-ESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPT-YGIDKPE 141 (296)
T ss_dssp --------------------------EEEEECSTTCCE-EEEECEETTEECCCCCCEEECT-TSCEEEEECS-HHHHCGG
T ss_pred --------------------------eEEEEcCCCCcE-EEEeeccCCCCCCCCCCEEECC-CCCEEEECCc-ccccccc
Confidence 4666776 4443 33321 111 78999997 5679988652 00000 0
Q ss_pred ---ee-cC-CCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCe---EEEEEcccc
Q psy17325 341 ---TD-WG-ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQ---QVILIDLMV 412 (461)
Q Consensus 341 ---~d-~~-~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~---~~~~~~~~~ 412 (461)
.. .. ..+.|++.+.+|+ ...+. ..+..|+||+++++++.| |++...+.|.+++++++|.. ..++ ....
T Consensus 142 ~~~~~~~~~~~~~l~~~~~~g~-~~~~~-~~~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~ 217 (296)
T 3e5z_A 142 EGYGGEMELPGRWVFRLAPDGT-LSAPI-RDRVKPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHF-TVEP 217 (296)
T ss_dssp GSSCCCCCSSSCEEEEECTTSC-EEEEE-CCCSSEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEE-CCSS
T ss_pred ccccccccCCCcEEEEECCCCC-EEEee-cCCCCCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEe-eCCC
Confidence 00 00 1357888888854 33333 778899999999776667 99999999999999545553 2333 2111
Q ss_pred ceeeccCCCCCcceEEEeee-CCEEEEEeCCCceeec
Q psy17325 413 EFTNDLMGDNGVPALALDLE-NGMLYYSTEGAEFLKT 448 (461)
Q Consensus 413 ~~~~~~~~~~~~~~~~l~~~-~~~lYwtd~~~~~i~~ 448 (461)
..|.+|+++ +|.||++. ..+..++
T Consensus 218 -----------~~p~~i~~d~~G~l~v~~-~~~v~~~ 242 (296)
T 3e5z_A 218 -----------GKTDGLRVDAGGLIWASA-GDGVHVL 242 (296)
T ss_dssp -----------SCCCSEEEBTTSCEEEEE-TTEEEEE
T ss_pred -----------CCCCeEEECCCCCEEEEc-CCeEEEE
Confidence 114456655 57899998 4443344
No 69
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.45 E-value=1.2e-11 Score=118.48 Aligned_cols=187 Identities=17% Similarity=0.138 Sum_probs=129.5
Q ss_pred cceeeeeeeecCCeEEEEeCCCC--eEEEEeC-CCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecC
Q psy17325 149 DLVEGLAYDWIGGHIYWLDSRLN--RIEVCDE-NGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD 225 (461)
Q Consensus 149 ~~p~~iavd~~~~~ly~~d~~~~--~I~~~~~-~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~d 225 (461)
..|.+|+++.. ++||++|...+ +|.+.+. +|+............|.++++.+ .+ .+|++| ....+|++.+.+
T Consensus 72 ~~p~gia~~~d-G~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~-~~--~~~v~d-~~~g~i~~~d~~ 146 (306)
T 2p4o_A 72 GKVSGLAFTSN-GDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLS-DT--QYLTAD-SYRGAIWLIDVV 146 (306)
T ss_dssp SEEEEEEECTT-SCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESS-SS--EEEEEE-TTTTEEEEEETT
T ss_pred CCceeEEEcCC-CcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccC-CC--cEEEEE-CCCCeEEEEeCC
Confidence 47999999964 56999996643 5888774 55543333223345688998764 46 799999 445699999987
Q ss_pred CCCcEEE-E---------ecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCccee
Q psy17325 226 GSNRSTI-I---------STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295 (461)
Q Consensus 226 G~~~~~i-~---------~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~ 295 (461)
+...+.. . ...+..|+|| ++.+++||++|.... +
T Consensus 147 ~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~----------------------------------~ 190 (306)
T 2p4o_A 147 QPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKM----------------------------------L 190 (306)
T ss_dssp TTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTT----------------------------------E
T ss_pred CCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCC----------------------------------E
Confidence 5321221 1 1245679999 555789999998874 4
Q ss_pred eeEEeCCC--C--ceEEEEeCCeeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEE-eeCCCCCc
Q psy17325 296 IGKANMDG--S--NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI-ISTKIYWP 370 (461)
Q Consensus 296 I~~~~~~g--~--~~~~l~~~~~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l-~~~~l~~p 370 (461)
|.+.++++ + .++++.....|.+|++|+ .|+||+++.. +++|.+.+.+|+...+. +...+.+|
T Consensus 191 I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~-dG~l~va~~~------------~~~V~~~~~~G~~~~~~~~~~~~~~p 257 (306)
T 2p4o_A 191 LLRIPVDSTDKPGEPEIFVEQTNIDDFAFDV-EGNLYGATHI------------YNSVVRIAPDRSTTIIAQAEQGVIGS 257 (306)
T ss_dssp EEEEEBCTTSCBCCCEEEEESCCCSSEEEBT-TCCEEEECBT------------TCCEEEECTTCCEEEEECGGGTCTTE
T ss_pred EEEEEeCCCCCCCccEEEeccCCCCCeEECC-CCCEEEEeCC------------CCeEEEECCCCCEEEEeecccccCCc
Confidence 66666653 2 234444433499999997 4688998877 78999999887653321 22457889
Q ss_pred eeEEEe---cCCCeEEEEcCCC
Q psy17325 371 NGLTLD---IATRRVYFADSKL 389 (461)
Q Consensus 371 ~glaiD---~~~~~ly~~d~~~ 389 (461)
.+++++ ++.++||+++...
T Consensus 258 ~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 258 TAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp EEEEECCSTTTTTEEEEEECTT
T ss_pred eEEEEecccCCCCEEEEECCCC
Confidence 999998 6779999998753
No 70
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.42 E-value=1.3e-10 Score=110.35 Aligned_cols=199 Identities=16% Similarity=0.128 Sum_probs=138.8
Q ss_pred cceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCC-------CCceeEEE---cCCCCceEEEE-eec----
Q psy17325 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNI-------TQPRGMML---DPSPGTRWLFW-TDW---- 213 (461)
Q Consensus 149 ~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~-------~~p~~ia~---d~~~g~~~ly~-td~---- 213 (461)
-.||++++|...+.+|+++...++|.++++++.....+....+ .+|.||.+ |+. | .|++ ++.
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-g--rL~vv~~~~~af 89 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-K--RLFAVMKNAKSF 89 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-C--EEEEEEEETTTT
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-C--cEEEEEcccccc
Confidence 3799999998899999999999999999998654444433332 25789999 787 6 6777 441
Q ss_pred -------CCCCcEEEEecC----CCCcEEEEec------------ccccceeEEeeccCCeeEEecCCC-ceeeecccce
Q psy17325 214 -------GENPRIERIGMD----GSNRSTIIST------------KIYWPNGLTLDIATRRVYFADSKL-DFIDCKSLEI 269 (461)
Q Consensus 214 -------~~~~~I~~~~~d----G~~~~~i~~~------------~~~~P~glavD~~~~~ly~~d~~~-~~i~~~~~~~ 269 (461)
.....+.+.+++ |.....+-.. ....|++|++|. .+++|+++... .
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~--------- 159 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMP--------- 159 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSC---------
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCC---------
Confidence 013679999998 4443333211 123599999996 79999998765 3
Q ss_pred eeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCC-----e--eeeEEEeccCCeEEEeecCceeeEEEee
Q psy17325 270 KTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ-----L--YEALALDLENGMLYYSTLKCTRWLFWTD 342 (461)
Q Consensus 270 ~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~-----~--p~~iavd~~~~~lY~t~~~~~~~l~~~d 342 (461)
.|.++++||+...+..... . ++||+++|.+..|++++.
T Consensus 160 -------------------------~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~---------- 204 (334)
T 2p9w_A 160 -------------------------AIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG---------- 204 (334)
T ss_dssp -------------------------EEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS----------
T ss_pred -------------------------eEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC----------
Confidence 4889999999666544222 1 779999998888887765
Q ss_pred cCCCCceEEEeecCCCeEEE-ee-----CCCCCceeE-EEecCCCeEEEEcCCCCeEEEEEec
Q psy17325 343 WGENPRIERIGMDGSNRSTI-IS-----TKIYWPNGL-TLDIATRRVYFADSKLDFIDFCNYD 398 (461)
Q Consensus 343 ~~~~~~I~~~~~dG~~~~~l-~~-----~~l~~p~gl-aiD~~~~~ly~~d~~~~~I~~~~~~ 398 (461)
.++|.++++.-..+..+ +. ..+..|.|| ++...+.-|++++...+.+...+.|
T Consensus 205 ---~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~D 264 (334)
T 2p9w_A 205 ---PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWD 264 (334)
T ss_dssp ---SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSS
T ss_pred ---CCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECCC
Confidence 46788888773222112 21 146789995 7774555559999877776666663
No 71
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.41 E-value=1.9e-11 Score=116.91 Aligned_cols=166 Identities=19% Similarity=0.250 Sum_probs=114.2
Q ss_pred CCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccc
Q psy17325 189 DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268 (461)
Q Consensus 189 ~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~ 268 (461)
.....+.|++.++..+ .|||+| ....+|++.+.+|. .+.+ ......|++|++|+ .++||+++....
T Consensus 42 ~~~~~~egp~~~~~g~--~l~~~d-~~~~~i~~~~~~g~-~~~~-~~~~~~~~gl~~d~-dG~l~v~~~~~~-------- 107 (305)
T 3dr2_A 42 DQATWSEGPAWWEAQR--TLVWSD-LVGRRVLGWREDGT-VDVL-LDATAFTNGNAVDA-QQRLVHCEHGRR-------- 107 (305)
T ss_dssp CCCSSEEEEEEEGGGT--EEEEEE-TTTTEEEEEETTSC-EEEE-EESCSCEEEEEECT-TSCEEEEETTTT--------
T ss_pred cCCcCccCCeEeCCCC--EEEEEE-CCCCEEEEEeCCCC-EEEE-eCCCCccceeeECC-CCCEEEEECCCC--------
Confidence 3456799999999866 899999 55679999988765 3333 33456799999997 567999887652
Q ss_pred eeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEe--CCe----eeeEEEeccCCeEEEeecCceeeEE--E
Q psy17325 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS--GQL----YEALALDLENGMLYYSTLKCTRWLF--W 340 (461)
Q Consensus 269 ~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~--~~~----p~~iavd~~~~~lY~t~~~~~~~l~--~ 340 (461)
.|.+.+.+|+. +++.. ... |++|++|+ .|.||+||.. .+.+- .
T Consensus 108 --------------------------~v~~~~~~g~~-~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~-~g~~~~~~ 158 (305)
T 3dr2_A 108 --------------------------AITRSDADGQA-HLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPP-FGLRKPSQ 158 (305)
T ss_dssp --------------------------EEEEECTTSCE-EEEECEETTEECSCCCCEEECT-TSCEEEECCS-GGGSCGGG
T ss_pred --------------------------EEEEECCCCCE-EEEEeccCCCccCCCCCEEECC-CCCEEEeCcC-CCcccccc
Confidence 46777777653 33321 111 88999997 6779988752 00000 0
Q ss_pred ---eec-CCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCC-----CeEEEEEecC
Q psy17325 341 ---TDW-GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKL-----DFIDFCNYDG 399 (461)
Q Consensus 341 ---~d~-~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~-----~~I~~~~~~g 399 (461)
... .....|++.+.++...+.+. .+..|+||+++++++.|||+|... +.|.++++++
T Consensus 159 ~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~ 224 (305)
T 3dr2_A 159 GCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD 224 (305)
T ss_dssp SCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEET
T ss_pred ccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC
Confidence 000 01357899888543333333 678899999998888899999874 7999999953
No 72
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.41 E-value=7.5e-11 Score=119.05 Aligned_cols=181 Identities=15% Similarity=0.163 Sum_probs=111.3
Q ss_pred eEEEcCccceeeeeeeecCCeEEEEeCCCCeEEEEeCC-CCcEEEE-ecCC------CCCceeEEEcCC---CCceEEEE
Q psy17325 142 DIVVSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDEN-GTNRIVL-AKDN------ITQPRGMMLDPS---PGTRWLFW 210 (461)
Q Consensus 142 ~~~~~g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~-G~~~~~l-~~~~------~~~p~~ia~d~~---~g~~~ly~ 210 (461)
.++..+|..|.+|++++ .++||+++...++|.+++.+ |....+. +... ...+.|||++|. ++ +||+
T Consensus 20 ~~~a~~l~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g--~lYv 96 (454)
T 1cru_A 20 KVILSNLNKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNP--YIYI 96 (454)
T ss_dssp EEEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSC--EEEE
T ss_pred EEEECCCCCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCC--EEEE
Confidence 35667899999999997 56799999987889999864 5543322 2221 233559999997 78 9999
Q ss_pred eecC-------C----CCcEEEEecCCC-----CcEEEEe----cccccceeEEeeccCCeeEEecCCCceeee---ccc
Q psy17325 211 TDWG-------E----NPRIERIGMDGS-----NRSTIIS----TKIYWPNGLTLDIATRRVYFADSKLDFIDC---KSL 267 (461)
Q Consensus 211 td~~-------~----~~~I~~~~~dG~-----~~~~i~~----~~~~~P~glavD~~~~~ly~~d~~~~~i~~---~~~ 267 (461)
+... . ..+|.|..+++. ..++|+. .....+.+|++++ .++||++......... ...
T Consensus 97 ~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd~~~~~~~~~~~~ 175 (454)
T 1cru_A 97 SGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLAYLFLP 175 (454)
T ss_dssp EEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEECCTTTTSGGGTTSC
T ss_pred EEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEECCCCCCCccccccc
Confidence 9832 0 358999988653 2344443 1345689999997 5689998543211000 000
Q ss_pred ceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCC-----------ceEEEEeCCe--eeeEEEeccCCeEEEeecC
Q psy17325 268 EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS-----------NASILVSGQL--YEALALDLENGMLYYSTLK 333 (461)
Q Consensus 268 ~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~-----------~~~~l~~~~~--p~~iavd~~~~~lY~t~~~ 333 (461)
...+.+..... ..-+......++|.|+++||+ ..++.. .++ |.+|++|+ .|.||+++.+
T Consensus 176 ~~~~~~p~~~~-----~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a-~G~RNp~gla~dp-~G~L~~~d~g 247 (454)
T 1cru_A 176 NQAQHTPTQQE-----LNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYT-LGHRNPQGLAFTP-NGKLLQSEQG 247 (454)
T ss_dssp CCTTCCCCHHH-----HHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEE-BCCSEEEEEEECT-TSCEEEEEEC
T ss_pred ccccccccccc-----ccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEE-ECCCCcceEEECC-CCCEEEEecC
Confidence 00000000000 000000001157999999998 334444 344 99999999 6999999975
No 73
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.41 E-value=5.9e-10 Score=109.54 Aligned_cols=235 Identities=13% Similarity=0.171 Sum_probs=160.7
Q ss_pred cceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCC
Q psy17325 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228 (461)
Q Consensus 149 ~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~ 228 (461)
..|.++++.+.++.||++....+.|.+.++........+... ..+.++++.|... +||++. .....|...++....
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~-~~v~~~~~spdg~--~l~~~~-~~~~~v~v~d~~~~~ 107 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG-SSPQGVAVSPDGK--QVYVTN-MASSTLSVIDTTSNT 107 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSS--EEEEEE-TTTTEEEEEETTTTE
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECC-CCccceEECCCCC--EEEEEE-CCCCEEEEEECCCCe
Confidence 457889999888899999988899999998655444333333 3799999999877 899987 445789999988654
Q ss_pred cEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEE
Q psy17325 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308 (461)
Q Consensus 229 ~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~ 308 (461)
....+.. ...|.++++++.++.||++....+ .|.+.++.......
T Consensus 108 ~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~----------------------------------~v~~~d~~~~~~~~ 152 (391)
T 1l0q_A 108 VAGTVKT-GKSPLGLALSPDGKKLYVTNNGDK----------------------------------TVSVINTVTKAVIN 152 (391)
T ss_dssp EEEEEEC-SSSEEEEEECTTSSEEEEEETTTT----------------------------------EEEEEETTTTEEEE
T ss_pred EEEEEeC-CCCcceEEECCCCCEEEEEeCCCC----------------------------------EEEEEECCCCcEEE
Confidence 4333332 347899999998888988876653 45566655443333
Q ss_pred EEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcC
Q psy17325 309 LVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS 387 (461)
Q Consensus 309 l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~ 387 (461)
.+.... |..++++|.++.||++... .+.|...++........+ ..-..|.++++++.+.+||++..
T Consensus 153 ~~~~~~~~~~~~~~~dg~~l~~~~~~------------~~~v~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~ 219 (391)
T 1l0q_A 153 TVSVGRSPKGIAVTPDGTKVYVANFD------------SMSISVIDTVTNSVIDTV-KVEAAPSGIAVNPEGTKAYVTNV 219 (391)
T ss_dssp EEECCSSEEEEEECTTSSEEEEEETT------------TTEEEEEETTTTEEEEEE-ECSSEEEEEEECTTSSEEEEEEE
T ss_pred EEecCCCcceEEECCCCCEEEEEeCC------------CCEEEEEECCCCeEEEEE-ecCCCccceEECCCCCEEEEEec
Confidence 333333 8999999998899888766 556666666544433333 23457899999988889999876
Q ss_pred --CCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeCCCceee
Q psy17325 388 --KLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447 (461)
Q Consensus 388 --~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~~~~~i~ 447 (461)
..+.|...++. ++.....+.. .... ..++++.++..||++....+.|+
T Consensus 220 ~~~~~~v~~~d~~-~~~~~~~~~~-~~~~----------~~~~~s~dg~~l~~s~~~d~~v~ 269 (391)
T 1l0q_A 220 DKYFNTVSMIDTG-TNKITARIPV-GPDP----------AGIAVTPDGKKVYVALSFXNTVS 269 (391)
T ss_dssp CSSCCEEEEEETT-TTEEEEEEEC-CSSE----------EEEEECTTSSEEEEEETTTTEEE
T ss_pred CcCCCcEEEEECC-CCeEEEEEec-CCCc----------cEEEEccCCCEEEEEcCCCCEEE
Confidence 67899999983 3443332222 1111 12344445667888877666664
No 74
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.41 E-value=6.6e-11 Score=114.81 Aligned_cols=196 Identities=12% Similarity=0.086 Sum_probs=124.3
Q ss_pred cceeeeeeeecCCeEEEEe------------CCCCeEEEEeCCC---CcEEEEecCC-----CCCceeEEEcCC-CCceE
Q psy17325 149 DLVEGLAYDWIGGHIYWLD------------SRLNRIEVCDENG---TNRIVLAKDN-----ITQPRGMMLDPS-PGTRW 207 (461)
Q Consensus 149 ~~p~~iavd~~~~~ly~~d------------~~~~~I~~~~~~G---~~~~~l~~~~-----~~~p~~ia~d~~-~g~~~ 207 (461)
..||.|++++ ++.+|.+- ...++|.+.+++. +..+.-+.+. ..+|.||.+.+. .|..+
T Consensus 50 ~G~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~ 128 (355)
T 3sre_A 50 NGSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVY 128 (355)
T ss_dssp SCCCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEE
T ss_pred CCcceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEE
Confidence 4689999986 78888885 2578999999873 3222222221 248999999663 23337
Q ss_pred EEEeecCC-CCcEEEEecCCC-CcEEEEe----cccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeE
Q psy17325 208 LFWTDWGE-NPRIERIGMDGS-NRSTIIS----TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRK 281 (461)
Q Consensus 208 ly~td~~~-~~~I~~~~~dG~-~~~~i~~----~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~ 281 (461)
||+++... ..+|+...++-. ...+++. ..+..|+++++|. .+++|+++..
T Consensus 129 L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~-~G~fyvt~~~----------------------- 184 (355)
T 3sre_A 129 LLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVG-PEHFYATNDH----------------------- 184 (355)
T ss_dssp EEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEE-TTEEEEEESC-----------------------
T ss_pred EEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeC-CCCEEecCCc-----------------------
Confidence 99998442 355555555422 2333332 2567899999996 6787776531
Q ss_pred EEEEecC-------CCCcceeeeEEeCCCCceEEEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEe
Q psy17325 282 LYWIDEG-------GNGVPLKIGKANMDGSNASILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353 (461)
Q Consensus 282 ~yw~d~~-------~~~~~~~I~~~~~~g~~~~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~ 353 (461)
|++|.. ...-.+.|++.+.. ..+++...-. |+||+++|.++.||++++. ..+|++.+
T Consensus 185 -~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~l~~pNGia~spDg~~lYvadt~------------~~~I~~~~ 249 (355)
T 3sre_A 185 -YFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEGFDFANGINISPDGKYVYIAELL------------AHKIHVYE 249 (355)
T ss_dssp -SCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEEESSEEEEEECTTSSEEEEEEGG------------GTEEEEEE
T ss_pred -EeCCcccccchhhccCCccEEEEEECC--eEEEeecCCcccCcceECCCCCEEEEEeCC------------CCeEEEEE
Confidence 111100 00001467777663 4445544322 9999999999999999988 77888888
Q ss_pred ecCCC----eEEEeeCCCCCceeEEEecCCCeEEEEc
Q psy17325 354 MDGSN----RSTIISTKIYWPNGLTLDIATRRVYFAD 386 (461)
Q Consensus 354 ~dG~~----~~~l~~~~l~~p~glaiD~~~~~ly~~d 386 (461)
+++.. ++++ .--..|.||++|..+|+||++.
T Consensus 250 ~~~~g~l~~~~~~--~~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 250 KHANWTLTPLRVL--SFDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp ECTTSCEEEEEEE--ECSSEEEEEEECTTTCCEEEEE
T ss_pred ECCCCcEecCEEE--eCCCCCceEEEeCCCCcEEEEe
Confidence 76322 2233 2246799999994469999953
No 75
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.38 E-value=1.6e-09 Score=105.55 Aligned_cols=244 Identities=9% Similarity=0.040 Sum_probs=151.6
Q ss_pred CccceeeeeeeecCCeEEEEeC---CCCeEEEEeCCC--CcEEEE--ecCCCCCceeEEEcCCCCceEEEEeecCCCCcE
Q psy17325 147 GLDLVEGLAYDWIGGHIYWLDS---RLNRIEVCDENG--TNRIVL--AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRI 219 (461)
Q Consensus 147 g~~~p~~iavd~~~~~ly~~d~---~~~~I~~~~~~G--~~~~~l--~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I 219 (461)
....|..+++++.++.||.++. ..+.|.+.+++. ...+.+ ....-..|..+++ ..+ +||+++. ....|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~--~l~~~~~-~~~~v 122 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGK--NIVTANY-SGGSI 122 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSS--EEEEEET-TTTEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCC--EEEEEEC-CCCEE
Confidence 4567899999998889999998 457886655443 222222 1223357999999 334 8999983 44567
Q ss_pred EEEecC--CCCc---EEEEecc---------cccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEE
Q psy17325 220 ERIGMD--GSNR---STIISTK---------IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285 (461)
Q Consensus 220 ~~~~~d--G~~~---~~i~~~~---------~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~ 285 (461)
...+++ |... ..+...+ ...|.++++++.++.||+++...+.|.
T Consensus 123 ~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~---------------------- 180 (361)
T 3scy_A 123 TVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIH---------------------- 180 (361)
T ss_dssp EEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEE----------------------
T ss_pred EEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEE----------------------
Confidence 777765 3211 1111111 224578999998888999998765432
Q ss_pred ecCCCCcceeeeEEeCCCC----c-e-------EEEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEE
Q psy17325 286 DEGGNGVPLKIGKANMDGS----N-A-------SILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352 (461)
Q Consensus 286 d~~~~~~~~~I~~~~~~g~----~-~-------~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~ 352 (461)
++..+..+. . . ........ |++++++|.++.||+++.. .+.|...
T Consensus 181 ----------v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~------------~~~v~v~ 238 (361)
T 3scy_A 181 ----------KFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI------------GGTVIAF 238 (361)
T ss_dssp ----------EEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT------------TCEEEEE
T ss_pred ----------EEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC------------CCeEEEE
Confidence 222232232 1 1 11122222 9999999998899998765 5567666
Q ss_pred eecCCCeEEEe-----eCCCCCceeEEEecCCCeEEEEcCC-CCeEEEEEec-CCCCeEEEEEccccceeeccCCCCCcc
Q psy17325 353 GMDGSNRSTII-----STKIYWPNGLTLDIATRRVYFADSK-LDFIDFCNYD-GTGRQQVILIDLMVEFTNDLMGDNGVP 425 (461)
Q Consensus 353 ~~dG~~~~~l~-----~~~l~~p~glaiD~~~~~ly~~d~~-~~~I~~~~~~-g~g~~~~~~~~~~~~~~~~~~~~~~~~ 425 (461)
+++....+.+. ......|.+|++++++++||+++.. .+.|..++++ .+|....+ .....+.. +.
T Consensus 239 ~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~-~~~~~g~~--------~~ 309 (361)
T 3scy_A 239 RYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKV-GYQLTGIH--------PR 309 (361)
T ss_dssp EEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEE-EEEECSSC--------CC
T ss_pred EecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEe-eEecCCCC--------Cc
Confidence 66533222221 1234568899999988899999988 8888888885 23443222 11111111 22
Q ss_pred eEEEeeeCCEEEEEeCCCceeec
Q psy17325 426 ALALDLENGMLYYSTEGAEFLKT 448 (461)
Q Consensus 426 ~~~l~~~~~~lYwtd~~~~~i~~ 448 (461)
.++++.++.+||+++..++.|++
T Consensus 310 ~~~~spdg~~l~~~~~~~~~v~v 332 (361)
T 3scy_A 310 NFIITPNGKYLLVACRDTNVIQI 332 (361)
T ss_dssp EEEECTTSCEEEEEETTTTEEEE
T ss_pred eEEECCCCCEEEEEECCCCCEEE
Confidence 45566667789999988877654
No 76
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.38 E-value=1.1e-10 Score=111.30 Aligned_cols=195 Identities=16% Similarity=0.196 Sum_probs=137.5
Q ss_pred cceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEE-ec----CCCCCceeEEEcCCCCceEEEEeecCC--------
Q psy17325 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVL-AK----DNITQPRGMMLDPSPGTRWLFWTDWGE-------- 215 (461)
Q Consensus 149 ~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l-~~----~~~~~p~~ia~d~~~g~~~ly~td~~~-------- 215 (461)
..|.++++|+.+++||+++.. +.|.+.+++|+.. .+ .. .....|.+|++|+. | .||+++...
T Consensus 71 ~~~~~i~~~~~~g~l~v~~~~-~~l~~~d~~g~~~-~~~~~~~~~~~~~~~~~i~~d~~-g--~l~v~~~~~~~~~~~~~ 145 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVADMR-LGLLVVQTDGTFE-EIAKKDSEGRRMQGCNDCAFDYE-G--NLWITAPAGEVAPADYT 145 (314)
T ss_dssp CCEEEEEECSSSSEEEEEETT-TEEEEEETTSCEE-ECCSBCTTSCBCBCCCEEEECTT-S--CEEEEECBCBCTTSCCC
T ss_pred CCCceEEEecCCCcEEEEECC-CCEEEEeCCCCEE-EEEeccCCCccccCCcCEEECCC-C--CEEEEecCccccccccc
Confidence 468899999765899999975 4899999886543 33 22 12245899999986 5 699998432
Q ss_pred ------CCcEEEEecCCCCcEEEEecccccceeEEee----ccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEE
Q psy17325 216 ------NPRIERIGMDGSNRSTIISTKIYWPNGLTLD----IATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285 (461)
Q Consensus 216 ------~~~I~~~~~dG~~~~~i~~~~~~~P~glavD----~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~ 285 (461)
...|++.+.+|.. ..+ ......|++++++ +.++.||+++...+.
T Consensus 146 ~~~~~~~~~l~~~~~~g~~-~~~-~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~------------------------ 199 (314)
T 1pjx_A 146 RSMQEKFGSIYCFTTDGQM-IQV-DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKK------------------------ 199 (314)
T ss_dssp BTTSSSCEEEEEECTTSCE-EEE-EEEESSEEEEEEEECTTSCEEEEEEEETTTTE------------------------
T ss_pred ccccCCCCeEEEECCCCCE-EEe-ccCCCCcceEEEecccCCCCCEEEEEECCCCe------------------------
Confidence 1579999888543 223 2346679999999 877789999877644
Q ss_pred ecCCCCcceeeeEEeCC--CCc--eEEEEeC-----CeeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeec-
Q psy17325 286 DEGGNGVPLKIGKANMD--GSN--ASILVSG-----QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD- 355 (461)
Q Consensus 286 d~~~~~~~~~I~~~~~~--g~~--~~~l~~~-----~~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~d- 355 (461)
|.+.+++ |+. .+++... ..|.+|++|+ .|+||+++.. .+.|.+.+.+
T Consensus 200 ----------i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~-~G~l~v~~~~------------~~~i~~~d~~~ 256 (314)
T 1pjx_A 200 ----------LWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDE-DNNLLVANWG------------SSHIEVFGPDG 256 (314)
T ss_dssp ----------EEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBT-TCCEEEEEET------------TTEEEEECTTC
T ss_pred ----------EEEEECCCCCccccceEEEECCCCCCCCCCceEECC-CCCEEEEEcC------------CCEEEEEcCCC
Confidence 3444332 211 1122221 2399999997 5788988765 6688888887
Q ss_pred CCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEec
Q psy17325 356 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398 (461)
Q Consensus 356 G~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~ 398 (461)
|+....+. .....|.++++++.+++||+++...+.|.+++++
T Consensus 257 g~~~~~~~-~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 257 GQPKMRIR-CPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp BSCSEEEE-CSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CcEeEEEe-CCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 66555544 4457899999986666699999888899999984
No 77
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.38 E-value=1.7e-10 Score=106.67 Aligned_cols=205 Identities=12% Similarity=0.110 Sum_probs=133.6
Q ss_pred CCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeeccccee
Q psy17325 191 ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270 (461)
Q Consensus 191 ~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~ 270 (461)
..++.||++||..+ .||... ...++|++.+++|.....+...+...+.|||++. .+++++++...+.+.
T Consensus 26 ~~~lSGla~~~~~~--~L~aV~-d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~~~~l~------- 94 (255)
T 3qqz_A 26 TNNISSLTWSAQSN--TLFSTI-NKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIG-DNQFVISDERDYAIY------- 94 (255)
T ss_dssp CSCEEEEEEETTTT--EEEEEE-ETTEEEEEEETTCCEEEEEECSSCSSEEEEEECS-TTEEEEEETTTTEEE-------
T ss_pred ccCcceeEEeCCCC--EEEEEE-CCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeC-CCEEEEEECCCCcEE-------
Confidence 36799999999888 899755 3478999999998766666556677899999994 667778877665432
Q ss_pred eeeccceeeeEEEEEecCCCCcceeeeEEeCCCCce--EEEE-e-----CCe-eeeEEEeccCCeEEEeecCceeeEEEe
Q psy17325 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA--SILV-S-----GQL-YEALALDLENGMLYYSTLKCTRWLFWT 341 (461)
Q Consensus 271 ~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~--~~l~-~-----~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~ 341 (461)
+.....++... ..+- . ... .+|||+||.++.||.+...
T Consensus 95 -------------------------~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~-------- 141 (255)
T 3qqz_A 95 -------------------------VISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEK-------- 141 (255)
T ss_dssp -------------------------EEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEES--------
T ss_pred -------------------------EEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECc--------
Confidence 11222222201 1111 0 011 5999999999999998765
Q ss_pred ecCCCC-ceEEEe--ecCCCeEEEe------eCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEcccc
Q psy17325 342 DWGENP-RIERIG--MDGSNRSTII------STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMV 412 (461)
Q Consensus 342 d~~~~~-~I~~~~--~dG~~~~~l~------~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~ 412 (461)
.+ .|++.+ +.+...+++- ...+..+.+|++|+.+++||+.....+.+..++. +|..+..+ .-..
T Consensus 142 ----~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~--~g~~~~~~-~L~~ 214 (255)
T 3qqz_A 142 ----NPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTL--VGEVIGEM-SLTK 214 (255)
T ss_dssp ----SSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECT--TCCEEEEE-ECST
T ss_pred ----CCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcC--CCCEEEEE-EcCC
Confidence 23 455554 1222223321 1246679999999999999999999999999999 67754333 2222
Q ss_pred ceeeccCCCCCcceEEEeee-CCEEEEEeCCCceeec
Q psy17325 413 EFTNDLMGDNGVPALALDLE-NGMLYYSTEGAEFLKT 448 (461)
Q Consensus 413 ~~~~~~~~~~~~~~~~l~~~-~~~lYwtd~~~~~i~~ 448 (461)
+.. .+ ...+++|-+|+++ +|.||++.+.+-..++
T Consensus 215 g~~-~l-~~~~~qpEGia~d~~G~lyIvsE~n~~y~f 249 (255)
T 3qqz_A 215 GSR-GL-SHNIKQAEGVAMDASGNIYIVSEPNRFYRF 249 (255)
T ss_dssp TGG-GC-SSCCCSEEEEEECTTCCEEEEETTTEEEEE
T ss_pred ccC-Cc-ccccCCCCeeEECCCCCEEEEcCCceEEEE
Confidence 211 00 0123456677665 5789999888754443
No 78
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.37 E-value=2.8e-13 Score=104.00 Aligned_cols=82 Identities=34% Similarity=0.882 Sum_probs=70.8
Q ss_pred CCCcccCCCCCC-CCCceeCCCCceEeCCCCCeecCCCCceecCcceecCCcccCceeeccCCccccC--CCCeeeeCCC
Q psy17325 29 DLAECKHKFGLC-SNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSC--NEGYVLEYDN 105 (461)
Q Consensus 29 ~~~~C~~~~~~C-~~~C~~~~~~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~~C~~~~g~~~C~C--~~g~~l~~~~ 105 (461)
+++||..++..| ...|.+++++|.|.|++||.+..++..|++++||. ...|.+.|.|++++|.|.| .+||.+..+.
T Consensus 2 dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~-~~~C~~~C~n~~g~y~C~C~g~~G~~~~~~~ 80 (87)
T 1z6c_A 2 DVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECS-ENMCAQLCVNYPGGYTCYCDGKKGFKLAQDQ 80 (87)
T ss_dssp CSCSSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHH-HSCCSSEECCCSSSCCEECCSSSCCBCCTTS
T ss_pred ccccccCCCCCCCCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeC-CCCCCCEEEccCCCEEEECCCCcCCcccCCC
Confidence 357888777667 45799999999999999999888889999999996 4579999999999999999 5899888888
Q ss_pred Cceeec
Q psy17325 106 HTCKAI 111 (461)
Q Consensus 106 ~~C~~~ 111 (461)
..|.++
T Consensus 81 ~~C~di 86 (87)
T 1z6c_A 81 KSCEVV 86 (87)
T ss_dssp SSCBCC
T ss_pred CcceEC
Confidence 888765
No 79
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.36 E-value=5.1e-10 Score=107.38 Aligned_cols=242 Identities=10% Similarity=0.045 Sum_probs=153.7
Q ss_pred cceeeeeeeecCCeEEEEeCCCCeEEEEeCC--CCcEEEE--ecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEec
Q psy17325 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDEN--GTNRIVL--AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGM 224 (461)
Q Consensus 149 ~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~--G~~~~~l--~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~ 224 (461)
..|.++++++.++.||++....+.|.+.+++ +.....+ +... ..|.+++++|... +||++. .....|...++
T Consensus 38 ~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~--~l~~~~-~~~~~i~~~d~ 113 (343)
T 1ri6_A 38 GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-GSLTHISTDHQGQ--FVFVGS-YNAGNVSVTRL 113 (343)
T ss_dssp SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-SCCSEEEECTTSS--EEEEEE-TTTTEEEEEEE
T ss_pred CCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-CCCcEEEEcCCCC--EEEEEe-cCCCeEEEEEC
Confidence 4688899999888899999988999997775 3332222 2222 3799999999877 899998 33456777777
Q ss_pred C-CCCcEEEE-ecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCC
Q psy17325 225 D-GSNRSTII-STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMD 302 (461)
Q Consensus 225 d-G~~~~~i~-~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~ 302 (461)
+ |.....+. ......|.++++++.++.||+++...+. |.+.+++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~----------------------------------v~~~d~~ 159 (343)
T 1ri6_A 114 EDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDR----------------------------------ICLFTVS 159 (343)
T ss_dssp ETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTE----------------------------------EEEEEEC
T ss_pred CCCccccccccccCCCCceEEEECCCCCEEEEecCCCCE----------------------------------EEEEEec
Confidence 3 32222221 1234568999999988899998855433 4444443
Q ss_pred --CCceEE---EEe--CCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecC---CCe--EEEe--e---
Q psy17325 303 --GSNASI---LVS--GQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG---SNR--STII--S--- 364 (461)
Q Consensus 303 --g~~~~~---l~~--~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG---~~~--~~l~--~--- 364 (461)
|+...+ ... ... |++++++|.++.||++... .+.|...+++. ... ..+. .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~------------~~~i~~~~~~~~~g~~~~~~~~~~~~~~~ 227 (343)
T 1ri6_A 160 DDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL------------NSSVDVWELKDPHGNIECVQTLDMMPENF 227 (343)
T ss_dssp TTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT------------TTEEEEEESSCTTSCCEEEEEEECSCTTC
T ss_pred CCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC------------CCEEEEEEecCCCCcEEEEeeccccCccc
Confidence 322211 111 122 8999999998889988765 45666666543 111 1111 0
Q ss_pred CCCCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeCCCc
Q psy17325 365 TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAE 444 (461)
Q Consensus 365 ~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~~~~ 444 (461)
.....|.+|++++.++.||++....+.|..++++..+.....+....... .+..++++.++.+||++....+
T Consensus 228 ~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~--------~~~~~~~s~dg~~l~~~~~~~~ 299 (343)
T 1ri6_A 228 SDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTET--------QPRGFNVDHSGKYLIAAGQKSH 299 (343)
T ss_dssp CSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSS--------SCCCEEECTTSSEEEEECTTTC
T ss_pred cccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCC--------ccceEEECCCCCEEEEecCCCC
Confidence 11346778999988889999998889999999942233222222111100 1224566666778999988777
Q ss_pred eeec
Q psy17325 445 FLKT 448 (461)
Q Consensus 445 ~i~~ 448 (461)
.|++
T Consensus 300 ~v~v 303 (343)
T 1ri6_A 300 HISV 303 (343)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 6643
No 80
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.36 E-value=1e-10 Score=112.96 Aligned_cols=226 Identities=16% Similarity=0.151 Sum_probs=140.6
Q ss_pred EEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEE------ecccccceeEEeecc---CCeeEEe
Q psy17325 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTII------STKIYWPNGLTLDIA---TRRVYFA 255 (461)
Q Consensus 185 ~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~------~~~~~~P~glavD~~---~~~ly~~ 255 (461)
.++..++..|++|++.|. | .||+++ ....+|.+++.++...+.+. ..+...|.|||+++. ++.||++
T Consensus 25 ~~va~gL~~P~~ia~~pd-G--~llVte-r~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~ 100 (347)
T 3das_A 25 RTVATGLNSPWGLAPLPG-G--DLLVSS-RDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAY 100 (347)
T ss_dssp EEEECCCSSEEEEEECTT-S--CEEEEE-TTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEE
T ss_pred EEeecCCCCceEEEEcCC-C--cEEEEE-ecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEE
Confidence 345677899999999997 5 699999 33578999987644433332 124567999999984 7889886
Q ss_pred cCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCC--------ceEEEEeCC----e--eeeEEEe
Q psy17325 256 DSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS--------NASILVSGQ----L--YEALALD 321 (461)
Q Consensus 256 d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~--------~~~~l~~~~----~--p~~iavd 321 (461)
.+.... .+|.|..+++. ..++|+... . ...|+++
T Consensus 101 yt~~~~--------------------------------~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fg 148 (347)
T 3das_A 101 FTSASD--------------------------------NRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFG 148 (347)
T ss_dssp EECSSS--------------------------------EEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEEC
T ss_pred EecCCC--------------------------------CEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCC
Confidence 432211 45777777762 245554321 1 6779999
Q ss_pred ccCCeEEEeecCceeeEEEeec-CCCCceEEEeecCC--------CeEEEeeCCCCCceeEEEecCCCeEEEEcCCCC--
Q psy17325 322 LENGMLYYSTLKCTRWLFWTDW-GENPRIERIGMDGS--------NRSTIISTKIYWPNGLTLDIATRRVYFADSKLD-- 390 (461)
Q Consensus 322 ~~~~~lY~t~~~~~~~l~~~d~-~~~~~I~~~~~dG~--------~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~-- 390 (461)
| .|+||++.......---.|. ...++|.|++.||+ ..+++. ..+.+|.||++|+ +++||++|.+.+
T Consensus 149 p-DG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a-~G~RNp~Gla~dp-~G~L~~~d~g~~~~ 225 (347)
T 3das_A 149 P-DKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYS-YGHRNVQGLAWDD-KQRLFASEFGQDTW 225 (347)
T ss_dssp T-TSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEE-BCCSBCCEEEECT-TCCEEEEECCSSSC
T ss_pred C-CCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEe-eCCCCcceEEECC-CCCEEEEecCCCCC
Confidence 8 46899985320000000000 12579999999998 444444 8999999999997 699999998764
Q ss_pred -eEEEEEecCCCCeEEE-EEccc---cceeeccC--CCCCcceEEEeeeCCEEEEEeCCCcee-ecceeE
Q psy17325 391 -FIDFCNYDGTGRQQVI-LIDLM---VEFTNDLM--GDNGVPALALDLENGMLYYSTEGAEFL-KTPLFC 452 (461)
Q Consensus 391 -~I~~~~~~g~g~~~~~-~~~~~---~~~~~~~~--~~~~~~~~~l~~~~~~lYwtd~~~~~i-~~~~~~ 452 (461)
.|.++.. |.+--. ..... .++...+. ++....|.+|+++++.+|.+....+.| |+++.+
T Consensus 226 deln~i~~---G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~~g~~~~~~l~~~~l~~v~~~~ 292 (347)
T 3das_A 226 DELNAIKP---GDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYAEGSVWMAGLRGERLWRIPLKG 292 (347)
T ss_dssp EEEEEECT---TCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEETTEEEEEESTTCSEEEEEEET
T ss_pred ceeeEEcC---CCEecCCcccCCCCCccccCCcEecCCCCCCCcceEEEcCceeeccccCCEEEEEEecC
Confidence 3444432 332100 00000 00000000 011124789999999999999988666 666653
No 81
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.35 E-value=5.4e-13 Score=102.21 Aligned_cols=80 Identities=35% Similarity=0.757 Sum_probs=67.8
Q ss_pred CCCcccCCCCCCCC-CceeCCCCceEeCCCCCeec-CCCCceecCcceec-CCccc-CceeeccCCccccCCCCeeeeCC
Q psy17325 29 DLAECKHKFGLCSN-TCHPTPLGALCTCPPGEILS-NDSVTCQDMNECEQ-PGYCS-QMCTNTKGSYICSCNEGYVLEYD 104 (461)
Q Consensus 29 ~~~~C~~~~~~C~~-~C~~~~~~~~C~C~~G~~l~-~~~~~C~d~~eC~~-~~~C~-~~C~~~~g~~~C~C~~g~~l~~~ 104 (461)
+++||..++..|.+ .|++++++|.|.|++||.+. .++..|++++||.. +..|. +.|.|+.++|.|.|++||.+..+
T Consensus 2 dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~ 81 (86)
T 1lmj_A 2 DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPN 81 (86)
T ss_dssp CCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSS
T ss_pred ccccccCCCCCCCCCEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccCCC
Confidence 46788877777865 79999999999999999864 35789999999974 34576 58999999999999999999888
Q ss_pred CCce
Q psy17325 105 NHTC 108 (461)
Q Consensus 105 ~~~C 108 (461)
+++|
T Consensus 82 ~~~C 85 (86)
T 1lmj_A 82 ISAC 85 (86)
T ss_dssp SCCC
T ss_pred CCcc
Confidence 8777
No 82
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.34 E-value=6.6e-10 Score=106.61 Aligned_cols=237 Identities=12% Similarity=0.146 Sum_probs=145.6
Q ss_pred CCeEEEEeCCCCeEEEEeCC--CCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecC--CCCcEEEEe-
Q psy17325 160 GGHIYWLDSRLNRIEVCDEN--GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD--GSNRSTIIS- 234 (461)
Q Consensus 160 ~~~ly~~d~~~~~I~~~~~~--G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~d--G~~~~~i~~- 234 (461)
.+.+|+++...+.|.+.+++ |.............|.+++++|... +||++.. ....|...+++ +...+.+..
T Consensus 4 ~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~--~l~~~~~-~~~~v~~~~~~~~~~~~~~~~~~ 80 (343)
T 1ri6_A 4 KQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKR--YLYVGVR-PEFRVLAYRIAPDDGALTFAAES 80 (343)
T ss_dssp EEEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSS--EEEEEET-TTTEEEEEEECTTTCCEEEEEEE
T ss_pred eEEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCC--EEEEeec-CCCeEEEEEecCCCCceeecccc
Confidence 45788888888999999876 4433222222335799999999877 8999983 33677776766 333332211
Q ss_pred cccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeC-CCCceEEEE--e
Q psy17325 235 TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM-DGSNASILV--S 311 (461)
Q Consensus 235 ~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~-~g~~~~~l~--~ 311 (461)
.....|.++++++.++.||++....+.| .+.++ +|...+.+. .
T Consensus 81 ~~~~~~~~~~~s~dg~~l~~~~~~~~~i----------------------------------~~~d~~~~~~~~~~~~~~ 126 (343)
T 1ri6_A 81 ALPGSLTHISTDHQGQFVFVGSYNAGNV----------------------------------SVTRLEDGLPVGVVDVVE 126 (343)
T ss_dssp ECSSCCSEEEECTTSSEEEEEETTTTEE----------------------------------EEEEEETTEEEEEEEEEC
T ss_pred ccCCCCcEEEEcCCCCEEEEEecCCCeE----------------------------------EEEECCCCcccccccccc
Confidence 1123799999999888899988765433 33333 333222222 2
Q ss_pred CCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecC--CCeE----EEeeCCCCCceeEEEecCCCeEEE
Q psy17325 312 GQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG--SNRS----TIISTKIYWPNGLTLDIATRRVYF 384 (461)
Q Consensus 312 ~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG--~~~~----~l~~~~l~~p~glaiD~~~~~ly~ 384 (461)
... |.+++++|.+..||+++.. .++|...+++. +... .+....-..|.++++++.+++||+
T Consensus 127 ~~~~~~~~~~s~dg~~l~~~~~~------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~ 194 (343)
T 1ri6_A 127 GLDGCHSANISPDNRTLWVPALK------------QDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYC 194 (343)
T ss_dssp CCTTBCCCEECTTSSEEEEEEGG------------GTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEE
T ss_pred CCCCceEEEECCCCCEEEEecCC------------CCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEE
Confidence 122 8999999998899988755 45666666653 2221 122123457999999988888999
Q ss_pred EcCCCCeEEEEEecC-CCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeCCCceee
Q psy17325 385 ADSKLDFIDFCNYDG-TGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447 (461)
Q Consensus 385 ~d~~~~~I~~~~~~g-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~~~~~i~ 447 (461)
++...+.|..++++. +|........ ........+...+..++++.++.+||++....+.|+
T Consensus 195 ~~~~~~~i~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~ 256 (343)
T 1ri6_A 195 VNELNSSVDVWELKDPHGNIECVQTL--DMMPENFSDTRWAADIHITPDGRHLYACDRTASLIT 256 (343)
T ss_dssp EETTTTEEEEEESSCTTSCCEEEEEE--ECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred EeCCCCEEEEEEecCCCCcEEEEeec--cccCccccccCCccceEECCCCCEEEEEecCCCEEE
Confidence 998889999999853 3332211110 001100000111112445555678999998777664
No 83
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.33 E-value=6.8e-11 Score=115.61 Aligned_cols=215 Identities=15% Similarity=0.171 Sum_probs=138.0
Q ss_pred cCccceeeeeeeec---CCeEEEEeCC-------CCeEEEEeCCCC-----cEEEEec------CCCCCceeEEEcCCCC
Q psy17325 146 SGLDLVEGLAYDWI---GGHIYWLDSR-------LNRIEVCDENGT-----NRIVLAK------DNITQPRGMMLDPSPG 204 (461)
Q Consensus 146 ~g~~~p~~iavd~~---~~~ly~~d~~-------~~~I~~~~~~G~-----~~~~l~~------~~~~~p~~ia~d~~~g 204 (461)
.+...|.+||+++. ++.||+++.. ..+|.+.++++. ..++++. .....|.+|+++|. |
T Consensus 63 ~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pd-G 141 (353)
T 2g8s_A 63 HGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGK-G 141 (353)
T ss_dssp STTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSS-S
T ss_pred CCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCC-C
Confidence 34556789999985 8999999865 457888887643 2334432 12355899999995 7
Q ss_pred ceEEEEeecCC-------------CCcEEEEecCCCC------------cEEEEecccccceeEEeeccCCeeEEecCCC
Q psy17325 205 TRWLFWTDWGE-------------NPRIERIGMDGSN------------RSTIISTKIYWPNGLTLDIATRRVYFADSKL 259 (461)
Q Consensus 205 ~~~ly~td~~~-------------~~~I~~~~~dG~~------------~~~i~~~~~~~P~glavD~~~~~ly~~d~~~ 259 (461)
+||++. +. ..+|.|++.+|+. ...+...++..|.||++|+.+++||++|...
T Consensus 142 --~Lyv~~-Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~ 218 (353)
T 2g8s_A 142 --YLFIAL-GENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGP 218 (353)
T ss_dssp --EEEEEE-CCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECS
T ss_pred --cEEEEE-CCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCC
Confidence 899996 33 2589999999972 2335566788999999998889999999875
Q ss_pred c---eeeecccceeeeeccceeeeEEEEEecCCC-CcceeeeEEe-------------CCCCc-eEEEEeCCe-eeeEEE
Q psy17325 260 D---FIDCKSLEIKTNVNYSTIFRKLYWIDEGGN-GVPLKIGKAN-------------MDGSN-ASILVSGQL-YEALAL 320 (461)
Q Consensus 260 ~---~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~-~~~~~I~~~~-------------~~g~~-~~~l~~~~~-p~~iav 320 (461)
+ .|..+ ..+.. |.+..-.-.. ..+.. ......... |.|+++
T Consensus 219 ~~~dei~~i--------------------~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~ 278 (353)
T 2g8s_A 219 RGGDEINIP--------------------QKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAF 278 (353)
T ss_dssp BSCEEEECC--------------------CTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEE
T ss_pred CCCcEEeEe--------------------ccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEE
Confidence 3 22211 11110 1100000000 00100 111111122 889998
Q ss_pred ec------cCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCe---EEEeeCCCCCceeEEEecCCCeEEEE-cCCCC
Q psy17325 321 DL------ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNR---STIISTKIYWPNGLTLDIATRRVYFA-DSKLD 390 (461)
Q Consensus 321 d~------~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~---~~l~~~~l~~p~glaiD~~~~~ly~~-d~~~~ 390 (461)
.. ..|.||+++.. ..+|.++.+++... ..++......|.+|++++ ++.||++ |...+
T Consensus 279 y~g~~fp~~~g~l~v~~~~------------~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~p-dG~lyv~td~~~g 345 (353)
T 2g8s_A 279 YNSDKFPQWQQKLFIGALK------------DKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGP-DGYLYVLTDESSG 345 (353)
T ss_dssp ECCSSSGGGTTEEEEEETT------------TTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECT-TSCEEEEECSTTE
T ss_pred ECCccCcccCCcEEEEEcc------------CCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECC-CCcEEEEEeCCCC
Confidence 73 24778877766 78999999986421 223323345899999994 5789996 76788
Q ss_pred eEEEEEe
Q psy17325 391 FIDFCNY 397 (461)
Q Consensus 391 ~I~~~~~ 397 (461)
+|+|+..
T Consensus 346 ~I~ri~~ 352 (353)
T 2g8s_A 346 ELLKVSP 352 (353)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 9998864
No 84
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.31 E-value=5.4e-10 Score=109.48 Aligned_cols=243 Identities=12% Similarity=0.073 Sum_probs=147.9
Q ss_pred CccceeeeeeeecCCeEEEEeCCCCeEEEEeC--CCCcEEEEecCCCCCceeEEEcCCCCceEEE--Eee------cC--
Q psy17325 147 GLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDE--NGTNRIVLAKDNITQPRGMMLDPSPGTRWLF--WTD------WG-- 214 (461)
Q Consensus 147 g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~--~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly--~td------~~-- 214 (461)
+...|..+++++.++.||.++.. .|.+.++ +|+............|..++++|..+ +|| .++ .+
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~--~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~--~l~~~~~~~~~~~~~~~~ 113 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK--KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTR--AIFLLAAKQPPYAVYANP 113 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT--EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCE--EEEEEECSSTTCCEEEEE
T ss_pred CCCCCcEEEECCCCCEEEEEccc--eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCC--EEEEEEecCCcceeccce
Confidence 44578899999988889999886 8888876 45433222111112488899999744 544 343 11
Q ss_pred ---CCCcEEEEec--CCCCcEEEEe---cccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEe
Q psy17325 215 ---ENPRIERIGM--DGSNRSTIIS---TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWID 286 (461)
Q Consensus 215 ---~~~~I~~~~~--dG~~~~~i~~---~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d 286 (461)
....+...++ +|.....+.. .....|.++++++.++.||.++...+.
T Consensus 114 ~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~------------------------- 168 (365)
T 1jof_A 114 FYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANK------------------------- 168 (365)
T ss_dssp ESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTE-------------------------
T ss_pred eecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCE-------------------------
Confidence 2344555555 4543322221 134579999999988899999876644
Q ss_pred cCCCCcceeeeEEeCC--CCceEE-EEe--C-Ce-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeec---C
Q psy17325 287 EGGNGVPLKIGKANMD--GSNASI-LVS--G-QL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD---G 356 (461)
Q Consensus 287 ~~~~~~~~~I~~~~~~--g~~~~~-l~~--~-~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~d---G 356 (461)
|.+.+++ |+...+ .+. . .. |++++++|.++.||++... .+.|...+++ |
T Consensus 169 ---------v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~------------~~~v~v~~~~~~~g 227 (365)
T 1jof_A 169 ---------LWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEA------------GNRICEYVIDPATH 227 (365)
T ss_dssp ---------EEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETT------------TTEEEEEEECTTTC
T ss_pred ---------EEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECC------------CCeEEEEEEeCCCC
Confidence 4444443 332211 122 1 23 9999999999999988765 4455555544 3
Q ss_pred CCe---EEEe--eCCC---C-------CceeEE-EecCCCeEEEEcCCCC-----eEEEEEecCCCCeEEEEE-ccccce
Q psy17325 357 SNR---STII--STKI---Y-------WPNGLT-LDIATRRVYFADSKLD-----FIDFCNYDGTGRQQVILI-DLMVEF 414 (461)
Q Consensus 357 ~~~---~~l~--~~~l---~-------~p~gla-iD~~~~~ly~~d~~~~-----~I~~~~~~g~g~~~~~~~-~~~~~~ 414 (461)
+.. ..+. .... . .|.+++ +++++++||+++...+ .|..++++.+|....+.. ......
T Consensus 228 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~ 307 (365)
T 1jof_A 228 MPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTS 307 (365)
T ss_dssp CEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSC
T ss_pred cEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCC
Confidence 321 1121 1111 2 588999 9988889999987665 888888853565433211 100110
Q ss_pred eeccCCCCCcceEEEee---eCCEEEEEeCCCceee
Q psy17325 415 TNDLMGDNGVPALALDL---ENGMLYYSTEGAEFLK 447 (461)
Q Consensus 415 ~~~~~~~~~~~~~~l~~---~~~~lYwtd~~~~~i~ 447 (461)
.+..+++++ ++++||+++..++.|+
T Consensus 308 --------~~~~~a~sp~~~dg~~l~v~~~~~~~v~ 335 (365)
T 1jof_A 308 --------GGHSNAVSPCPWSDEWMAITDDQEGWLE 335 (365)
T ss_dssp --------CTTCCCEEECTTCTTEEEEECSSSCEEE
T ss_pred --------CcccceecCCCcCCCEEEEEEcCCCeEE
Confidence 123567777 6889999998877664
No 85
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.30 E-value=1.9e-09 Score=100.25 Aligned_cols=192 Identities=14% Similarity=0.116 Sum_probs=125.4
Q ss_pred cceeeeeeeecCCeEEEEeC--CCCeEEEEeCC-CCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecC
Q psy17325 149 DLVEGLAYDWIGGHIYWLDS--RLNRIEVCDEN-GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD 225 (461)
Q Consensus 149 ~~p~~iavd~~~~~ly~~d~--~~~~I~~~~~~-G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~d 225 (461)
..|.||+++.. +.||++.. ..++|.++++. |+....+.......+.|++++ .+ .||++.|. ...+...+.+
T Consensus 21 ~f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~--~lyv~t~~-~~~v~viD~~ 94 (266)
T 2iwa_A 21 AFTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NE--KLYQVVWL-KNIGFIYDRR 94 (266)
T ss_dssp CCEEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TT--EEEEEETT-CSEEEEEETT
T ss_pred CCcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CC--EEEEEEec-CCEEEEEECC
Confidence 35899999865 79999975 46899999976 544444432332346677887 45 89999975 4689988887
Q ss_pred CCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCc
Q psy17325 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305 (461)
Q Consensus 226 G~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~ 305 (461)
......-+..+ .|.|+.+.+.+++||.++. .+ +|.+.++....
T Consensus 95 t~~v~~~i~~g--~~~g~glt~Dg~~l~vs~g-s~----------------------------------~l~viD~~t~~ 137 (266)
T 2iwa_A 95 TLSNIKNFTHQ--MKDGWGLATDGKILYGSDG-TS----------------------------------ILYEIDPHTFK 137 (266)
T ss_dssp TTEEEEEEECC--SSSCCEEEECSSSEEEECS-SS----------------------------------EEEEECTTTCC
T ss_pred CCcEEEEEECC--CCCeEEEEECCCEEEEECC-CC----------------------------------eEEEEECCCCc
Confidence 32221112222 3556666666899999984 43 23344433322
Q ss_pred e-EEE-Ee-CC----eeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeec-CCCeEEEeeC------------
Q psy17325 306 A-SIL-VS-GQ----LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD-GSNRSTIIST------------ 365 (461)
Q Consensus 306 ~-~~l-~~-~~----~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~d-G~~~~~l~~~------------ 365 (461)
. ..+ +. .+ .|+++++. +|+||.+... .+.|.+.++. |+-...|-..
T Consensus 138 v~~~I~Vg~~~~p~~~~nele~~--dg~lyvn~~~------------~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~ 203 (266)
T 2iwa_A 138 LIKKHNVKYNGHRVIRLNELEYI--NGEVWANIWQ------------TDCIARISAKDGTLLGWILLPNLRKKLIDEGFR 203 (266)
T ss_dssp EEEEEECEETTEECCCEEEEEEE--TTEEEEEETT------------SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCT
T ss_pred EEEEEEECCCCcccccceeEEEE--CCEEEEecCC------------CCeEEEEECCCCcEEEEEECCCccccccccccc
Confidence 1 111 11 11 16777766 6788887655 6678888774 3333333212
Q ss_pred CCCCceeEEEecCCCeEEEEcCCCCeEEEEEe
Q psy17325 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397 (461)
Q Consensus 366 ~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~ 397 (461)
....|+|||+|+.+++||++....++++.+++
T Consensus 204 ~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l 235 (266)
T 2iwa_A 204 DIDVLNGIAWDQENKRIFVTGKLWPKLFEIKL 235 (266)
T ss_dssp TCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred ccCceEEEEEcCCCCEEEEECCCCCeEEEEEE
Confidence 23578999999999999999999999999999
No 86
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.30 E-value=2.7e-09 Score=104.74 Aligned_cols=185 Identities=15% Similarity=0.183 Sum_probs=133.4
Q ss_pred CeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEecccccc
Q psy17325 161 GHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 240 (461)
Q Consensus 161 ~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~~~~~P 240 (461)
+.+|++....+.|.+.+++.......+... ..|.++++.|... +||++. .....|...++........+.. -..|
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~--~l~~~~-~~d~~i~v~d~~~~~~~~~~~~-~~~v 76 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGT--KVYVAN-AHSNDVSIIDTATNNVIATVPA-GSSP 76 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSS--EEEEEE-GGGTEEEEEETTTTEEEEEEEC-SSSE
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEEEeecC-CCcceEEECCCCC--EEEEEC-CCCCeEEEEECCCCeEEEEEEC-CCCc
Confidence 468888888999999998765544444433 4589999999877 899887 3456888888864433333332 2378
Q ss_pred eeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCe-eeeEE
Q psy17325 241 NGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL-YEALA 319 (461)
Q Consensus 241 ~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~-p~~ia 319 (461)
.++++++.+++||++..... .|.+.++........+.... +.+++
T Consensus 77 ~~~~~spdg~~l~~~~~~~~----------------------------------~v~v~d~~~~~~~~~~~~~~~~~~~~ 122 (391)
T 1l0q_A 77 QGVAVSPDGKQVYVTNMASS----------------------------------TLSVIDTTSNTVAGTVKTGKSPLGLA 122 (391)
T ss_dssp EEEEECTTSSEEEEEETTTT----------------------------------EEEEEETTTTEEEEEEECSSSEEEEE
T ss_pred cceEECCCCCEEEEEECCCC----------------------------------EEEEEECCCCeEEEEEeCCCCcceEE
Confidence 99999998899999876653 46666666554443443333 89999
Q ss_pred EeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEe
Q psy17325 320 LDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397 (461)
Q Consensus 320 vd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~ 397 (461)
++|.+..||++... .+.|...++........+ ..-..|.++++++.++.||++....+.|...++
T Consensus 123 ~s~dg~~l~~~~~~------------~~~v~~~d~~~~~~~~~~-~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~ 187 (391)
T 1l0q_A 123 LSPDGKKLYVTNNG------------DKTVSVINTVTKAVINTV-SVGRSPKGIAVTPDGTKVYVANFDSMSISVIDT 187 (391)
T ss_dssp ECTTSSEEEEEETT------------TTEEEEEETTTTEEEEEE-ECCSSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred ECCCCCEEEEEeCC------------CCEEEEEECCCCcEEEEE-ecCCCcceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 99988889888766 566777766544333333 234568999999888899999888899999999
No 87
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.28 E-value=1.3e-09 Score=104.95 Aligned_cols=199 Identities=15% Similarity=0.153 Sum_probs=137.3
Q ss_pred ccceeeeeeeecCCeEEEEeCCC----CeEEEEeCCCCcEEEEec--CCCCCceeEEEcCCCCceEEEEeecCC-----C
Q psy17325 148 LDLVEGLAYDWIGGHIYWLDSRL----NRIEVCDENGTNRIVLAK--DNITQPRGMMLDPSPGTRWLFWTDWGE-----N 216 (461)
Q Consensus 148 ~~~p~~iavd~~~~~ly~~d~~~----~~I~~~~~~G~~~~~l~~--~~~~~p~~ia~d~~~g~~~ly~td~~~-----~ 216 (461)
-..|.++++|+ .+++|++.... +.|.+.++++.....++. .....|.+|++|+. | .+|+++... .
T Consensus 86 ~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~-g--~l~v~~~~~~~~~~~ 161 (333)
T 2dg1_A 86 KANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSK-G--GFYFTDFRGYSTNPL 161 (333)
T ss_dssp SSSEEEEEECT-TSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTT-S--CEEEEECCCBTTBCC
T ss_pred CCCcceEEECC-CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCC-C--CEEEEeccccccCCC
Confidence 35689999986 46799998776 789999998877654432 22356899999996 5 689888431 3
Q ss_pred CcEEEEecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceee
Q psy17325 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI 296 (461)
Q Consensus 217 ~~I~~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I 296 (461)
..|++++.++.....+. .....|+++++++.++.||+++...+. |
T Consensus 162 ~~l~~~~~~~~~~~~~~-~~~~~~~~i~~~~dg~~l~v~~~~~~~----------------------------------i 206 (333)
T 2dg1_A 162 GGVYYVSPDFRTVTPII-QNISVANGIALSTDEKVLWVTETTANR----------------------------------L 206 (333)
T ss_dssp EEEEEECTTSCCEEEEE-EEESSEEEEEECTTSSEEEEEEGGGTE----------------------------------E
T ss_pred ceEEEEeCCCCEEEEee-cCCCcccceEECCCCCEEEEEeCCCCe----------------------------------E
Confidence 67999988875554443 345679999999887789999865533 4
Q ss_pred eEEeC--CCCceE-----EEEe-CC--eeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCC
Q psy17325 297 GKANM--DGSNAS-----ILVS-GQ--LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTK 366 (461)
Q Consensus 297 ~~~~~--~g~~~~-----~l~~-~~--~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~ 366 (461)
.+.++ +|.... .... .. .|.+|++|+. |+||+++.. .+.|.+.+.+|.....+....
T Consensus 207 ~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~-G~l~v~~~~------------~~~v~~~d~~g~~~~~~~~~~ 273 (333)
T 2dg1_A 207 HRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSD-DNLYVAMYG------------QGRVLVFNKRGYPIGQILIPG 273 (333)
T ss_dssp EEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTT-CCEEEEEET------------TTEEEEECTTSCEEEEEECTT
T ss_pred EEEEecCCCcCcccccceEEEecCCCCCCCceEECCC-CCEEEEEcC------------CCEEEEECCCCCEEEEEEcCC
Confidence 44444 333221 1111 11 3999999974 678888765 568888888776555554221
Q ss_pred -----CCCceeEEEecCCCeEEEEcCC-----CCeEEEEEec
Q psy17325 367 -----IYWPNGLTLDIATRRVYFADSK-----LDFIDFCNYD 398 (461)
Q Consensus 367 -----l~~p~glaiD~~~~~ly~~d~~-----~~~I~~~~~~ 398 (461)
+..|.++++++++++||++... .+.|++++++
T Consensus 274 ~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 274 RDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp GGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred CccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 2279999998666799998765 3467777763
No 88
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.27 E-value=9.4e-10 Score=106.70 Aligned_cols=192 Identities=12% Similarity=0.124 Sum_probs=126.9
Q ss_pred CCceeEEEcCCCCceEEEEee--cC---------CCCcEEEEecCCC--CcEEEEecc------cccceeEEeecc---C
Q psy17325 192 TQPRGMMLDPSPGTRWLFWTD--WG---------ENPRIERIGMDGS--NRSTIISTK------IYWPNGLTLDIA---T 249 (461)
Q Consensus 192 ~~p~~ia~d~~~g~~~ly~td--~~---------~~~~I~~~~~dG~--~~~~i~~~~------~~~P~glavD~~---~ 249 (461)
..|..|++++ .| .+|.+. |. ...+|++++++.. ..+.+...+ ...|.||.+... +
T Consensus 50 ~G~EDi~~~~-~G--~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~ 126 (355)
T 3sre_A 50 NGSEDLEILP-NG--LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNT 126 (355)
T ss_dssp SCCCEEEECT-TS--EEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCC
T ss_pred CCcceeEEcC-CC--eEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCc
Confidence 4689999998 58 899885 11 3578999998732 233333322 258999999652 3
Q ss_pred CeeEEecCCC--ceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEe---CCe--eeeEEEec
Q psy17325 250 RRVYFADSKL--DFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS---GQL--YEALALDL 322 (461)
Q Consensus 250 ~~ly~~d~~~--~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~---~~~--p~~iavd~ 322 (461)
.+||+++... .+| .|++.+.++.....+.. ..+ |+++++|+
T Consensus 127 ~~L~Vvnh~~~~s~i--------------------------------elf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~ 174 (355)
T 3sre_A 127 VYLLVVNHPGSSSTV--------------------------------EVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVG 174 (355)
T ss_dssp EEEEEEECSTTCCEE--------------------------------EEEEEETTTTEEEEEEEECCTTCSSEEEEEEEE
T ss_pred EEEEEEECCCCCCeE--------------------------------EEEEEECCCCEEEEEeccccCCCCCCceEEEeC
Confidence 4799998763 222 35555565554333322 112 99999997
Q ss_pred cCCeEEEeecCceeeEEEeec----------CCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeE
Q psy17325 323 ENGMLYYSTLKCTRWLFWTDW----------GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFI 392 (461)
Q Consensus 323 ~~~~lY~t~~~~~~~l~~~d~----------~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I 392 (461)
.|.+|+++.. |++|- ...++|+|.+.+ ..+++. .++..|+||+++++++.||++|+..++|
T Consensus 175 -~G~fyvt~~~-----~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~-~~l~~pNGia~spDg~~lYvadt~~~~I 245 (355)
T 3sre_A 175 -PEHFYATNDH-----YFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVA-EGFDFANGINISPDGKYVYIAELLAHKI 245 (355)
T ss_dssp -TTEEEEEESC-----SCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEE-EEESSEEEEEECTTSSEEEEEEGGGTEE
T ss_pred -CCCEEecCCc-----EeCCcccccchhhccCCccEEEEEECC--eEEEee-cCCcccCcceECCCCCEEEEEeCCCCeE
Confidence 5778887543 44441 135688888763 444554 8899999999999999999999999999
Q ss_pred EEEEecCCCCeE--EEEEccccceeeccCCCCCcceEEEeee--CCEEEEEe
Q psy17325 393 DFCNYDGTGRQQ--VILIDLMVEFTNDLMGDNGVPALALDLE--NGMLYYST 440 (461)
Q Consensus 393 ~~~~~~g~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~lYwtd 440 (461)
++++++++|... .++ . .++ .|-+++++ +|.||++.
T Consensus 246 ~~~~~~~~g~l~~~~~~-~-~~g-----------~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 246 HVYEKHANWTLTPLRVL-S-FDT-----------LVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp EEEEECTTSCEEEEEEE-E-CSS-----------EEEEEEECTTTCCEEEEE
T ss_pred EEEEECCCCcEecCEEE-e-CCC-----------CCceEEEeCCCCcEEEEe
Confidence 999997556432 222 1 111 25567666 38999965
No 89
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.23 E-value=9.5e-12 Score=94.19 Aligned_cols=76 Identities=36% Similarity=0.772 Sum_probs=62.7
Q ss_pred CCCcccCCCCCCCC-CceeCCCCceEeCCCCCeecCCCCceecCcceecCCccc-CceeeccCCccccCCCCeeeeCCCC
Q psy17325 29 DLAECKHKFGLCSN-TCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCS-QMCTNTKGSYICSCNEGYVLEYDNH 106 (461)
Q Consensus 29 ~~~~C~~~~~~C~~-~C~~~~~~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~-~~C~~~~g~~~C~C~~g~~l~~~~~ 106 (461)
++++|.. +..|.+ .|++++++|.|.|++||.+ ++..|++++||.....|. +.|.++.++|.|.|++||.+..+ +
T Consensus 4 dideC~~-~~~C~~g~C~n~~g~y~C~C~~Gy~~--~g~~C~dideC~~~~~C~~~~C~n~~g~y~C~C~~G~~g~~~-~ 79 (82)
T 1emn_A 4 DMDECKE-PDVCKHGQCINTDGSYRCECPFGYIL--AGNECVDTDECSVGNPCGNGTCKNVIGGFECTCEEGFEPGPM-M 79 (82)
T ss_dssp CCCSSSS-TTSCSSSEECCCSSCCCEECCTTEEE--ETTEEEECCGGGTCCTTSSSCEEECSSSEEECCSSSSCCCSS-S
T ss_pred ccccCCC-CCCcCCCEEEecCCCEEEECCCCeEC--CCCccCCcccccCCCCCCCCEeECCCCCEEeECCCCeEeCCC-C
Confidence 4677865 345654 7999999999999999986 578999999997555775 59999999999999999987765 5
Q ss_pred ce
Q psy17325 107 TC 108 (461)
Q Consensus 107 ~C 108 (461)
.|
T Consensus 80 ~C 81 (82)
T 1emn_A 80 TC 81 (82)
T ss_dssp CC
T ss_pred cc
Confidence 55
No 90
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.21 E-value=1.1e-09 Score=109.14 Aligned_cols=255 Identities=13% Similarity=0.133 Sum_probs=148.1
Q ss_pred cCCeEEEEeCCC----CeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecC--------CCCcEEEEecCC
Q psy17325 159 IGGHIYWLDSRL----NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG--------ENPRIERIGMDG 226 (461)
Q Consensus 159 ~~~~ly~~d~~~----~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~--------~~~~I~~~~~dG 226 (461)
..+.+|+++... +.|.++|+.......-+..+ ..| +|+++|..+ +||+++.. ....|..++...
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG-~~P-gia~SpDgk--~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGG-FLP-HPVAAEDGS--FFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC-SSC-EEEECTTSS--CEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECC-CCC-ceEECCCCC--EEEEEeccccccccCCCCCEEEEEECCC
Confidence 467899999876 79999998766544333333 358 999999977 99999842 124688887764
Q ss_pred CCc-EEEEec---c---cccceeEEeeccCCeeEEecCC-Cceeeecccceeee---eccc---ee---eeEEEEEecCC
Q psy17325 227 SNR-STIIST---K---IYWPNGLTLDIATRRVYFADSK-LDFIDCKSLEIKTN---VNYS---TI---FRKLYWIDEGG 289 (461)
Q Consensus 227 ~~~-~~i~~~---~---~~~P~glavD~~~~~ly~~d~~-~~~i~~~~~~~~~~---v~~~---~~---~~~~yw~d~~~ 289 (461)
... ..|... . ...|.++++++.+++||+++.. .+.|..++...++. |... .+ .+..|.+....
T Consensus 159 ~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~d 238 (426)
T 3c75_H 159 FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRD 238 (426)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETT
T ss_pred CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCC
Confidence 433 233221 0 2479999999999999999864 56676665544222 2221 01 11223332222
Q ss_pred CCcceeeeEEeCCCCceEEE----EeCCe-ee--eEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEE
Q psy17325 290 NGVPLKIGKANMDGSNASIL----VSGQL-YE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTI 362 (461)
Q Consensus 290 ~~~~~~I~~~~~~g~~~~~l----~~~~~-p~--~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l 362 (461)
+++..++......... +.... |. .+++.+..+.+|++.. .++++.+++.+....++
T Consensus 239 ----G~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~-------------~g~V~ViD~~~~~~~v~ 301 (426)
T 3c75_H 239 ----GSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTY-------------TGKIFQADLTAEGATFR 301 (426)
T ss_dssp ----SSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBT-------------TSEEEEEEECSSCEEEC
T ss_pred ----CCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeC-------------CCcEEEEeccCCceEEe
Confidence 1233333321111111 00000 22 2344666666655432 35677777766554433
Q ss_pred eeCC---------CCCcee---EEEecCCCeEEEEcC---------CCCeEEEEEecCCCCeEEEEEccccceeeccCCC
Q psy17325 363 ISTK---------IYWPNG---LTLDIATRRVYFADS---------KLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGD 421 (461)
Q Consensus 363 ~~~~---------l~~p~g---laiD~~~~~ly~~d~---------~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~ 421 (461)
.... -..|.| +++++++++||++.. ..+.|..+|+. +......+.-+. .
T Consensus 302 ~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~-T~kvv~~I~vg~---~------ 371 (426)
T 3c75_H 302 APIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAE-TGERINKIELGH---E------ 371 (426)
T ss_dssp CCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETT-TCCEEEEEEEEE---E------
T ss_pred eeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECC-CCeEEEEEECCC---C------
Confidence 2100 013555 899999999999964 24579999993 454433332211 1
Q ss_pred CCcceEEEeeeCC-EEEEEeCCCcee
Q psy17325 422 NGVPALALDLENG-MLYYSTEGAEFL 446 (461)
Q Consensus 422 ~~~~~~~l~~~~~-~lYwtd~~~~~i 446 (461)
+..++++.++. .||.+++.++.|
T Consensus 372 --P~gia~spDg~~~lyv~n~~s~~V 395 (426)
T 3c75_H 372 --IDSINVSQDAEPLLYALSAGTQTL 395 (426)
T ss_dssp --ECEEEECCSSSCEEEEEETTTTEE
T ss_pred --cCeEEEccCCCEEEEEEcCCCCeE
Confidence 22566666777 899999877655
No 91
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.21 E-value=1.5e-08 Score=100.78 Aligned_cols=242 Identities=14% Similarity=0.116 Sum_probs=160.0
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCc
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~ 229 (461)
.+.++++. ..+++|++....+.|.+.+++.......+......|.+++++|... .||++. .....|...++.....
T Consensus 171 ~v~~~~~~-~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~-~~~~~i~~~d~~~~~~ 246 (433)
T 3bws_A 171 FVETISIP-EHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRD--LVYCSN-WISEDISVIDRKTKLE 246 (433)
T ss_dssp EEEEEEEG-GGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTT--EEEEEE-TTTTEEEEEETTTTEE
T ss_pred ceeEEEEc-CCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCC--EEEEEe-cCCCcEEEEECCCCcE
Confidence 34557774 4678999999999999999876554444433345799999999877 899888 4456899888864333
Q ss_pred EEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEE
Q psy17325 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL 309 (461)
Q Consensus 230 ~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l 309 (461)
...+. ....|.++++++.++.||.+....+.+... . +.|.+.++........
T Consensus 247 ~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~-----------------------d----g~i~~~d~~~~~~~~~ 298 (433)
T 3bws_A 247 IRKTD-KIGLPRGLLLSKDGKELYIAQFSASNQESG-----------------------G----GRLGIYSMDKEKLIDT 298 (433)
T ss_dssp EEECC-CCSEEEEEEECTTSSEEEEEEEESCTTCSC-----------------------C----EEEEEEETTTTEEEEE
T ss_pred EEEec-CCCCceEEEEcCCCCEEEEEECCCCccccC-----------------------C----CeEEEEECCCCcEEee
Confidence 22222 234689999999888888877533211100 0 3566777654433322
Q ss_pred EeCC-eeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCC
Q psy17325 310 VSGQ-LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 388 (461)
Q Consensus 310 ~~~~-~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~ 388 (461)
.... .|.+++++|.++.||++... .+.|...+++.......+ .....|.++++++.++.||++...
T Consensus 299 ~~~~~~~~~~~~~~~g~~l~~~~~~------------~~~v~v~d~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~ 365 (433)
T 3bws_A 299 IGPPGNKRHIVSGNTENKIYVSDMC------------CSKIEVYDLKEKKVQKSI-PVFDKPNTIALSPDGKYLYVSCRG 365 (433)
T ss_dssp EEEEECEEEEEECSSTTEEEEEETT------------TTEEEEEETTTTEEEEEE-ECSSSEEEEEECTTSSEEEEEECC
T ss_pred ccCCCCcceEEECCCCCEEEEEecC------------CCEEEEEECCCCcEEEEe-cCCCCCCeEEEcCCCCEEEEEecC
Confidence 2212 28899999988889988766 667777777654433333 345678999999888889998776
Q ss_pred C--------------CeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeCCCceeec
Q psy17325 389 L--------------DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKT 448 (461)
Q Consensus 389 ~--------------~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~~~~~i~~ 448 (461)
. +.|...++. ++.....+.. .... ..++++.++..||.+...++.|++
T Consensus 366 ~~~~~~~~~~~g~~dg~v~~~d~~-~~~~~~~~~~-~~~~----------~~~~~s~dg~~l~~~~~~d~~i~v 427 (433)
T 3bws_A 366 PNHPTEGYLKKGLVLGKVYVIDTT-TDTVKEFWEA-GNQP----------TGLDVSPDNRYLVISDFLDHQIRV 427 (433)
T ss_dssp CCCTTTCTTSCCSSCCEEEEEETT-TTEEEEEEEC-SSSE----------EEEEECTTSCEEEEEETTTTEEEE
T ss_pred CCccccccccccccceEEEEEECC-CCcEEEEecC-CCCC----------ceEEEcCCCCEEEEEECCCCeEEE
Confidence 4 489999983 4444333322 1111 134555567789999887777753
No 92
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.21 E-value=6.5e-08 Score=94.03 Aligned_cols=200 Identities=13% Similarity=0.076 Sum_probs=127.6
Q ss_pred ccceeeeeeeecCCeEEEEeCCCCeEEEEeCCC--CcE---EEEecCC---------CCCceeEEEcCCCCceEEEEeec
Q psy17325 148 LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG--TNR---IVLAKDN---------ITQPRGMMLDPSPGTRWLFWTDW 213 (461)
Q Consensus 148 ~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G--~~~---~~l~~~~---------~~~p~~ia~d~~~g~~~ly~td~ 213 (461)
-..|..+++ .++.||+++...+.|.+.+++. ... ..+.... ...|.+++++|... +||+++.
T Consensus 99 ~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~--~l~~~~~ 174 (361)
T 3scy_A 99 GADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGK--YLLADDL 174 (361)
T ss_dssp SSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSS--EEEEEET
T ss_pred CCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCC--EEEEEeC
Confidence 346888888 5788999999899999988753 221 1111111 12357899999876 8999994
Q ss_pred CCCCcEEEEecCCCC-------c------EEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeee
Q psy17325 214 GENPRIERIGMDGSN-------R------STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFR 280 (461)
Q Consensus 214 ~~~~~I~~~~~dG~~-------~------~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~ 280 (461)
+ ...|...+++... . ..+.......|.++++++.++.||+++...+.
T Consensus 175 ~-~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~------------------- 234 (361)
T 3scy_A 175 G-TDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGT------------------- 234 (361)
T ss_dssp T-TTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCE-------------------
T ss_pred C-CCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCe-------------------
Confidence 3 4577776666332 1 12222234579999999988899999876644
Q ss_pred EEEEEecCCCCcceeeeEEeCCCCceEEEE---eCC---e-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEe
Q psy17325 281 KLYWIDEGGNGVPLKIGKANMDGSNASILV---SGQ---L-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIG 353 (461)
Q Consensus 281 ~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~---~~~---~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~ 353 (461)
|.+.+++....+.+. ... . |.+|+++|.++.||+++.. ..+.|...+
T Consensus 235 ---------------v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~-----------~~~~i~v~~ 288 (361)
T 3scy_A 235 ---------------VIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRL-----------KADGVAIFK 288 (361)
T ss_dssp ---------------EEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECS-----------SSCEEEEEE
T ss_pred ---------------EEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCC-----------CCCEEEEEE
Confidence 334443322221111 111 1 7799999999888887643 123455555
Q ss_pred ec---CCCeEE-EeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEec
Q psy17325 354 MD---GSNRST-IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398 (461)
Q Consensus 354 ~d---G~~~~~-l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~ 398 (461)
++ |+...+ .+.. -..|.+|++++++++||+++...+.|..+.+|
T Consensus 289 ~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 289 VDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp ECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred EcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 54 332111 1212 46899999998888999999888888886664
No 93
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.20 E-value=1.5e-08 Score=98.00 Aligned_cols=206 Identities=16% Similarity=0.107 Sum_probs=134.3
Q ss_pred ccceeeeeeeecCCeEEEEeCCCCeEEEEeCC--CCcEEEE-e-cC--------CCCCceeEEEcCCCCceEEEEeecCC
Q psy17325 148 LDLVEGLAYDWIGGHIYWLDSRLNRIEVCDEN--GTNRIVL-A-KD--------NITQPRGMMLDPSPGTRWLFWTDWGE 215 (461)
Q Consensus 148 ~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~--G~~~~~l-~-~~--------~~~~p~~ia~d~~~g~~~ly~td~~~ 215 (461)
...|.++++++.++.||+++...+.|.+.+++ |...... + .. ....|.+++++|. | .||+++. .
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spd-g--~l~v~~~-~ 160 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPD-N--RLAVIDL-G 160 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTT-S--CEEEEET-T
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCC-C--cEEEEeC-C
Confidence 45789999999888999999888999888864 4432211 1 11 1124778999996 4 4999984 4
Q ss_pred CCcEEEEecCCCC-cEEEE---ecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCC
Q psy17325 216 NPRIERIGMDGSN-RSTII---STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291 (461)
Q Consensus 216 ~~~I~~~~~dG~~-~~~i~---~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~ 291 (461)
...|...+++... ...+. ...-..|.++++++.++.||+++...+.|
T Consensus 161 ~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v----------------------------- 211 (347)
T 3hfq_A 161 SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQI----------------------------- 211 (347)
T ss_dssp TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEE-----------------------------
T ss_pred CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEE-----------------------------
Confidence 4578777776222 22221 11223689999999888899988776543
Q ss_pred cceeeeEEeCCC--CceEE---EEe--C-----CeeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeec--CC
Q psy17325 292 VPLKIGKANMDG--SNASI---LVS--G-----QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD--GS 357 (461)
Q Consensus 292 ~~~~I~~~~~~g--~~~~~---l~~--~-----~~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~d--G~ 357 (461)
.+.+++. ...+. +.. . ..|.+++++|.++.||+++.. .+.|...+++ |+
T Consensus 212 -----~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~------------~~~v~v~~~~~~g~ 274 (347)
T 3hfq_A 212 -----ASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRG------------YNTLAVFAVTADGH 274 (347)
T ss_dssp -----EEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEET------------TTEEEEEEECGGGC
T ss_pred -----EEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCC------------CCEEEEEEECCCCc
Confidence 2222221 11111 111 0 117889999999999998776 5666666664 32
Q ss_pred CeEE-EeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEecC-CCCe
Q psy17325 358 NRST-IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG-TGRQ 403 (461)
Q Consensus 358 ~~~~-l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g-~g~~ 403 (461)
...+ .+......|.+|++++++++||+++...+.|..+++|. +|..
T Consensus 275 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 275 LTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp EEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 2221 12233557999999988889999999888888886643 3444
No 94
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.17 E-value=9.4e-09 Score=97.57 Aligned_cols=167 Identities=16% Similarity=0.148 Sum_probs=114.5
Q ss_pred CCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEeccc-------ccceeEEe---eccCCeeEE-ecCCCc
Q psy17325 192 TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI-------YWPNGLTL---DIATRRVYF-ADSKLD 260 (461)
Q Consensus 192 ~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~~~-------~~P~glav---D~~~~~ly~-~d~~~~ 260 (461)
--|.+++.|+..+ .+|++++. +.+|.+.+.++...+.+....+ ..|.||.+ |+. ++|++ ++....
T Consensus 13 ~yPE~~~wd~~~g--~~~vs~l~-~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~a 88 (334)
T 2p9w_A 13 LTPEDTIYDRTRQ--VFYQSNLY-KGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKS 88 (334)
T ss_dssp CCCSCEEEETTTT--EEEEEETT-TTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTT
T ss_pred cCCcCccCcCCCC--EEEEEecc-CCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEccccc
Confidence 4599999999988 99999954 5799999998655444432232 26899999 776 88887 442110
Q ss_pred eeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCC----CCceEEEEe-----C-------C--eeeeEEEec
Q psy17325 261 FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMD----GSNASILVS-----G-------Q--LYEALALDL 322 (461)
Q Consensus 261 ~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~----g~~~~~l~~-----~-------~--~p~~iavd~ 322 (461)
. .. .+ ....-...+.+.+++ |+....+-- . . .+++|++|+
T Consensus 89 f-~~-~g--------------------~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~ 146 (334)
T 2p9w_A 89 F-NF-AD--------------------QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR 146 (334)
T ss_dssp T-CT-TS--------------------CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT
T ss_pred c-cc-cc--------------------cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC
Confidence 0 00 00 000000357777777 443332221 0 1 288999996
Q ss_pred cCCeEEEeecCceeeEEEeecCCC-CceEEEeecCCCeEEEeeC-----CCCCceeEEEecCCCeEEEEcCCCCeEEEEE
Q psy17325 323 ENGMLYYSTLKCTRWLFWTDWGEN-PRIERIGMDGSNRSTIIST-----KIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396 (461)
Q Consensus 323 ~~~~lY~t~~~~~~~l~~~d~~~~-~~I~~~~~dG~~~~~l~~~-----~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~ 396 (461)
.|++|++++. . +.|.|++.||+...++... ....|+||++.+.+..|++++. .++|.+++
T Consensus 147 -~GnaYVt~s~------------~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD 212 (334)
T 2p9w_A 147 -DGNSYVAFAL------------GMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFD 212 (334)
T ss_dssp -TSCEEEEEEE------------SSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEE
T ss_pred -CCCEEEeCCC------------CCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEc
Confidence 7999999887 7 8999999999966655421 2234789999988899999999 99999999
Q ss_pred ec
Q psy17325 397 YD 398 (461)
Q Consensus 397 ~~ 398 (461)
+.
T Consensus 213 ~~ 214 (334)
T 2p9w_A 213 VS 214 (334)
T ss_dssp CS
T ss_pred CC
Confidence 93
No 95
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.15 E-value=3.7e-11 Score=101.45 Aligned_cols=81 Identities=28% Similarity=0.573 Sum_probs=67.0
Q ss_pred CCCcccCCCCCCCCCceeCCCCceEeCCCCCeecCCCCceecCcceec-CCcccCce-eeccCCccccCCCCeeeeCCCC
Q psy17325 29 DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQ-PGYCSQMC-TNTKGSYICSCNEGYVLEYDNH 106 (461)
Q Consensus 29 ~~~~C~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~d~~eC~~-~~~C~~~C-~~~~g~~~C~C~~g~~l~~~~~ 106 (461)
++++|..++..-...|.+.+++|.|.|++||. +..|+++++|.. +..|.+.| .++.++|.|.|++||.+..+++
T Consensus 47 dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~----G~~C~~~deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy~l~~dG~ 122 (146)
T 1x7a_L 47 DGDQCEPNPCLNGGLCKDDINSYECWCQVGFE----GKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQK 122 (146)
T ss_dssp ---CCSSCSSCTTCEEEECSSCEEEECCSSEE----STTTCEECCTTSGGGSCSSBCCCCSSSCCCCBCCTTEEECTTSS
T ss_pred CcCcCCCCCCCCCCEeECCCCCEEEecCCCCc----CCcCCCCccccCCCCCCcCCCCCCCCCCEEeEcCCCcEeCCCCC
Confidence 67889865533334799999999999999996 678999999974 45798999 9999999999999999999999
Q ss_pred ceeeccc
Q psy17325 107 TCKAINH 113 (461)
Q Consensus 107 ~C~~~~~ 113 (461)
.|.++++
T Consensus 123 ~C~~~~~ 129 (146)
T 1x7a_L 123 SCKPAVP 129 (146)
T ss_dssp SEEECSS
T ss_pred cCCCCCC
Confidence 9988754
No 96
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.15 E-value=1e-08 Score=98.85 Aligned_cols=201 Identities=14% Similarity=0.169 Sum_probs=126.4
Q ss_pred EEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeee
Q psy17325 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDC 264 (461)
Q Consensus 185 ~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~ 264 (461)
.+.......+.++++++..+ .|||+|. ...+|.+.+.++.....+.. -..|.+|++++ .+++|++...
T Consensus 42 ~~~~~~~~~~egp~~~~~~~--~l~~~d~-~~~~i~~~d~~~~~~~~~~~--~~~v~~i~~~~-dg~l~v~~~~------ 109 (326)
T 2ghs_A 42 VLDETPMLLGEGPTFDPASG--TAWWFNI-LERELHELHLASGRKTVHAL--PFMGSALAKIS-DSKQLIASDD------ 109 (326)
T ss_dssp EEECSCCSBEEEEEEETTTT--EEEEEEG-GGTEEEEEETTTTEEEEEEC--SSCEEEEEEEE-TTEEEEEETT------
T ss_pred EeeccCCCCCcCCeEeCCCC--EEEEEEC-CCCEEEEEECCCCcEEEEEC--CCcceEEEEeC-CCeEEEEECC------
Confidence 33433345588999999878 9999994 45799999998754443322 24688999986 4677776521
Q ss_pred cccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeC-----Ce-eeeEEEeccCCeEEEeecCceeeE
Q psy17325 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG-----QL-YEALALDLENGMLYYSTLKCTRWL 338 (461)
Q Consensus 265 ~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~-----~~-p~~iavd~~~~~lY~t~~~~~~~l 338 (461)
.|.+.++++...+.+... .. ++++++|+. |++|+++....
T Consensus 110 ------------------------------gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~-G~l~v~~~~~~--- 155 (326)
T 2ghs_A 110 ------------------------------GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPS-GALWIGTMGRK--- 155 (326)
T ss_dssp ------------------------------EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTT-SCEEEEEEETT---
T ss_pred ------------------------------CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCC-CCEEEEeCCCc---
Confidence 256666654444444321 12 889999984 56787654200
Q ss_pred EEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEec-CCC-C--eEEEEEccccce
Q psy17325 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD-GTG-R--QQVILIDLMVEF 414 (461)
Q Consensus 339 ~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~-g~g-~--~~~~~~~~~~~~ 414 (461)
.....+.|++.+ +|+. +.+. ..+..|++|+++++++.|||++...+.|.+++++ .+| . .+.++.......
T Consensus 156 ---~~~~~~~l~~~~-~g~~-~~~~-~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~ 229 (326)
T 2ghs_A 156 ---AETGAGSIYHVA-KGKV-TKLF-ADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIK 229 (326)
T ss_dssp ---CCTTCEEEEEEE-TTEE-EEEE-EEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSS
T ss_pred ---CCCCceEEEEEe-CCcE-EEee-CCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCC
Confidence 001235788887 5543 2333 4566799999998888999999999999999984 234 2 112222111000
Q ss_pred eeccCCCCCcceEEEeee-CCEEEEEeCCCcee
Q psy17325 415 TNDLMGDNGVPALALDLE-NGMLYYSTEGAEFL 446 (461)
Q Consensus 415 ~~~~~~~~~~~~~~l~~~-~~~lYwtd~~~~~i 446 (461)
..|.+++++ ++.||++.++.+.|
T Consensus 230 ---------~~p~gi~~d~~G~lwva~~~~~~v 253 (326)
T 2ghs_A 230 ---------GGMDGSVCDAEGHIWNARWGEGAV 253 (326)
T ss_dssp ---------SEEEEEEECTTSCEEEEEETTTEE
T ss_pred ---------CCCCeeEECCCCCEEEEEeCCCEE
Confidence 124567665 57899988766544
No 97
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.12 E-value=2.1e-08 Score=99.85 Aligned_cols=237 Identities=12% Similarity=0.082 Sum_probs=150.8
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEec-----CCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEec
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK-----DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGM 224 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~-----~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~ 224 (461)
.|.++++++ ++.+|++....+.|.+.++.......... .....+.++++.+. + .+|++. .....|...++
T Consensus 124 ~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~-~--~~~~s~-~~d~~v~~~d~ 198 (433)
T 3bws_A 124 QPKSVRFID-NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEH-N--ELWVSQ-MQANAVHVFDL 198 (433)
T ss_dssp CBCCCEESS-SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGG-T--EEEEEE-GGGTEEEEEET
T ss_pred CceEEEEeC-CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCC-C--EEEEEE-CCCCEEEEEEC
Confidence 466888988 88999999888899999987554443221 22334677899664 5 678777 44578888888
Q ss_pred CCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCC
Q psy17325 225 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304 (461)
Q Consensus 225 dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~ 304 (461)
+.......+......|.++++++.++.||++....+ .|.+.++...
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----------------------------------~i~~~d~~~~ 244 (433)
T 3bws_A 199 KTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISE----------------------------------DISVIDRKTK 244 (433)
T ss_dssp TTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTT----------------------------------EEEEEETTTT
T ss_pred CCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCC----------------------------------cEEEEECCCC
Confidence 765444444444567999999998899998876553 3555665433
Q ss_pred ceEEEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEE
Q psy17325 305 NASILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 383 (461)
Q Consensus 305 ~~~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly 383 (461)
.....+.... |.+++++|.++.||.+..... .+. ...+.|...++......... ..-..|.++++++.++.||
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~-~~~----~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~ 318 (433)
T 3bws_A 245 LEIRKTDKIGLPRGLLLSKDGKELYIAQFSAS-NQE----SGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIY 318 (433)
T ss_dssp EEEEECCCCSEEEEEEECTTSSEEEEEEEESC-TTC----SCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEE
T ss_pred cEEEEecCCCCceEEEEcCCCCEEEEEECCCC-ccc----cCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEE
Confidence 3222222222 899999998888887764200 000 01346666666544333322 2223788999998888999
Q ss_pred EEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeCCC
Q psy17325 384 FADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGA 443 (461)
Q Consensus 384 ~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~~~ 443 (461)
++....+.|...+++ ++.....+. ..... ..++++.++..||.+....
T Consensus 319 ~~~~~~~~v~v~d~~-~~~~~~~~~-~~~~~----------~~~~~s~dg~~l~~~~~~~ 366 (433)
T 3bws_A 319 VSDMCCSKIEVYDLK-EKKVQKSIP-VFDKP----------NTIALSPDGKYLYVSCRGP 366 (433)
T ss_dssp EEETTTTEEEEEETT-TTEEEEEEE-CSSSE----------EEEEECTTSSEEEEEECCC
T ss_pred EEecCCCEEEEEECC-CCcEEEEec-CCCCC----------CeEEEcCCCCEEEEEecCC
Confidence 998889999999993 344333322 11111 1233334455677777654
No 98
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.11 E-value=4.4e-08 Score=90.99 Aligned_cols=200 Identities=15% Similarity=0.121 Sum_probs=120.0
Q ss_pred CceeEEEcCCCCceEEEEeecCC--CCcEEEEecCCCC-cEEEEecccccceeEEeeccCCeeEEecCCCceeeecccce
Q psy17325 193 QPRGMMLDPSPGTRWLFWTDWGE--NPRIERIGMDGSN-RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEI 269 (461)
Q Consensus 193 ~p~~ia~d~~~g~~~ly~td~~~--~~~I~~~~~dG~~-~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~ 269 (461)
.|.||++++. | .||.+. +. ...|.++++.... ...+.......+.|++++ +++||++....+
T Consensus 22 f~~Gl~~~~d-g--~Lyvst-g~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~--------- 86 (266)
T 2iwa_A 22 FTQGLVYAEN-D--TLFEST-GLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKN--------- 86 (266)
T ss_dssp CEEEEEECST-T--EEEEEE-CSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCS---------
T ss_pred CcccEEEeCC-C--eEEEEC-CCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCC---------
Confidence 4899999986 7 899997 32 4789999997433 333322233356677887 689999988764
Q ss_pred eeeeccceeeeEEEEEecCCCCcceeeeEEeCCCC-ceEEEEeCCeeeeEEEeccCCeEEEeecCceeeEEEeecCCCCc
Q psy17325 270 KTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS-NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPR 348 (461)
Q Consensus 270 ~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~-~~~~l~~~~~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~ 348 (461)
.+.+.+.+.. ....+-.. .|.|+.+.+.+++||+|+ + .+.+++.|-.....
T Consensus 87 -------------------------~v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~vs~-g-s~~l~viD~~t~~v 138 (266)
T 2iwa_A 87 -------------------------IGFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKILYGSD-G-TSILYEIDPHTFKL 138 (266)
T ss_dssp -------------------------EEEEEETTTTEEEEEEECC-SSSCCEEEECSSSEEEEC-S-SSEEEEECTTTCCE
T ss_pred -------------------------EEEEEECCCCcEEEEEECC-CCCeEEEEECCCEEEEEC-C-CCeEEEEECCCCcE
Confidence 4666665522 22333222 355666666689999987 4 23444444322211
Q ss_pred eEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeec-----cCCCCC
Q psy17325 349 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTND-----LMGDNG 423 (461)
Q Consensus 349 I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~-----~~~~~~ 423 (461)
+.+...... ...+..|++|++. +++||++.+..+.|.++|+. +|.....+.-. ++... ......
T Consensus 139 ~~~I~Vg~~------~~p~~~~nele~~--dg~lyvn~~~~~~V~vID~~-tg~V~~~I~~~--g~~~~~~~~~~~~~~v 207 (266)
T 2iwa_A 139 IKKHNVKYN------GHRVIRLNELEYI--NGEVWANIWQTDCIARISAK-DGTLLGWILLP--NLRKKLIDEGFRDIDV 207 (266)
T ss_dssp EEEEECEET------TEECCCEEEEEEE--TTEEEEEETTSSEEEEEETT-TCCEEEEEECH--HHHHHHHHTTCTTCCC
T ss_pred EEEEEECCC------CcccccceeEEEE--CCEEEEecCCCCeEEEEECC-CCcEEEEEECC--CcccccccccccccCc
Confidence 111111100 0134568999985 68999999999999999994 67765544321 11000 000001
Q ss_pred cceEEEeeeCCEEEEEeCCCcee
Q psy17325 424 VPALALDLENGMLYYSTEGAEFL 446 (461)
Q Consensus 424 ~~~~~l~~~~~~lYwtd~~~~~i 446 (461)
+.+++++..++++|+|......+
T Consensus 208 ~nGIa~~~~~~~lfVTgk~~~~v 230 (266)
T 2iwa_A 208 LNGIAWDQENKRIFVTGKLWPKL 230 (266)
T ss_dssp EEEEEEETTTTEEEEEETTCSEE
T ss_pred eEEEEEcCCCCEEEEECCCCCeE
Confidence 22444444567999999888766
No 99
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.10 E-value=2.6e-08 Score=97.55 Aligned_cols=257 Identities=14% Similarity=0.149 Sum_probs=145.3
Q ss_pred eecCCeEEEEeCC----CCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecC--------CCCcEEEEec
Q psy17325 157 DWIGGHIYWLDSR----LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG--------ENPRIERIGM 224 (461)
Q Consensus 157 d~~~~~ly~~d~~----~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~--------~~~~I~~~~~ 224 (461)
.+.++.+|++|.. .++|.++|.+......-+..+ ..|. |++.|... +||++++. ....|..++.
T Consensus 41 ~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG-~~P~-va~spDG~--~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 41 APDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG-FLPN-PVVADDGS--FIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp CCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC-SSCE-EEECTTSS--CEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred CCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECC-CCCc-EEECCCCC--EEEEEcccccccccCCCCCEEEEEEC
Confidence 4568899999986 789999998765543333333 3485 99999977 99999731 1246888877
Q ss_pred CCCCc-EEEEecc------cccceeEEeeccCCeeEEecCC-Cceeeeccccee---eeeccc---ee---eeEEEEEec
Q psy17325 225 DGSNR-STIISTK------IYWPNGLTLDIATRRVYFADSK-LDFIDCKSLEIK---TNVNYS---TI---FRKLYWIDE 287 (461)
Q Consensus 225 dG~~~-~~i~~~~------~~~P~glavD~~~~~ly~~d~~-~~~i~~~~~~~~---~~v~~~---~~---~~~~yw~d~ 287 (461)
..... ..|.... -..|.++++++.+++||+++.. .+.+..++...+ .+|... .+ ....|.+..
T Consensus 117 ~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~ 196 (386)
T 3sjl_D 117 VTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHC 196 (386)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEE
T ss_pred CCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEEC
Confidence 65443 2222211 2379999999999999999864 567777665443 233221 01 111122222
Q ss_pred CCCCcceeeeEEeCCCCceEEEEeCCe------ee--eEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCe
Q psy17325 288 GGNGVPLKIGKANMDGSNASILVSGQL------YE--ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNR 359 (461)
Q Consensus 288 ~~~~~~~~I~~~~~~g~~~~~l~~~~~------p~--~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~ 359 (461)
.. +++....+......+...... |. ..+++...|+++|... .++|+.+++.+...
T Consensus 197 ~D----G~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~-------------~g~V~v~d~~~~~~ 259 (386)
T 3sjl_D 197 RD----GSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTY-------------TGKIHQIDLSSGDA 259 (386)
T ss_dssp TT----SCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBT-------------TSEEEEEECTTSSC
T ss_pred CC----CCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeC-------------CCEEEEEECCCCcc
Confidence 22 123333332211111100000 11 1344444554444221 35777787776655
Q ss_pred EEEeeCC--------CC-Ccee---EEEecCCCeEEEEcC---------CCCeEEEEEecCCCCeEEEEEccccceeecc
Q psy17325 360 STIISTK--------IY-WPNG---LTLDIATRRVYFADS---------KLDFIDFCNYDGTGRQQVILIDLMVEFTNDL 418 (461)
Q Consensus 360 ~~l~~~~--------l~-~p~g---laiD~~~~~ly~~d~---------~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~ 418 (461)
+++-.-. .. .|.| +++|+..++||++.. ..++|..+|+. ++.....+..+. ..
T Consensus 260 ~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~-t~kv~~~i~vg~-~~---- 333 (386)
T 3sjl_D 260 KFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAK-TGERLAKFEMGH-EI---- 333 (386)
T ss_dssp EECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETT-TCCEEEEEEEEE-EE----
T ss_pred eeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECC-CCeEEEEEECCC-Cc----
Confidence 4432111 01 2444 888999999999853 23689999993 455433332221 11
Q ss_pred CCCCCcceEEEeeeCC-EEEEEeCCCcee
Q psy17325 419 MGDNGVPALALDLENG-MLYYSTEGAEFL 446 (461)
Q Consensus 419 ~~~~~~~~~~l~~~~~-~lYwtd~~~~~i 446 (461)
..++++.++. .||.+++.++.|
T Consensus 334 ------~~lavs~D~~~~ly~tn~~~~~V 356 (386)
T 3sjl_D 334 ------DSINVSQDEKPLLYALSTGDKTL 356 (386)
T ss_dssp ------CEEEECSSSSCEEEEEETTTTEE
T ss_pred ------ceEEECCCCCeEEEEEcCCCCeE
Confidence 2466666765 789989877755
No 100
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.06 E-value=4.6e-09 Score=105.91 Aligned_cols=177 Identities=16% Similarity=0.240 Sum_probs=109.0
Q ss_pred EEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEe--c------ccccceeEEeecc---CCeeE
Q psy17325 185 VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIS--T------KIYWPNGLTLDIA---TRRVY 253 (461)
Q Consensus 185 ~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~--~------~~~~P~glavD~~---~~~ly 253 (461)
.++...+..|++|+++|. | .||+++ ....+|.+++.++...+.+.. . ....+.|||+++. ++.||
T Consensus 20 ~~~a~~l~~P~~~a~~pd-G--~l~V~e-~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lY 95 (454)
T 1cru_A 20 KVILSNLNKPHALLWGPD-N--QIWLTE-RATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIY 95 (454)
T ss_dssp EEEECCCSSEEEEEECTT-S--CEEEEE-TTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEE
T ss_pred EEEECCCCCceEEEEcCC-C--cEEEEE-cCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEE
Confidence 334456889999999997 5 699999 333579998875322333321 1 2345669999987 89999
Q ss_pred EecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCC-----ceEEEEeC----C-e-eeeEEEec
Q psy17325 254 FADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS-----NASILVSG----Q-L-YEALALDL 322 (461)
Q Consensus 254 ~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~-----~~~~l~~~----~-~-p~~iavd~ 322 (461)
+++.....-. ++.. .....+|.|.++++. ..++++.. . . +.+|+++|
T Consensus 96 v~~s~~~~~~---------------------~~~~-~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p 153 (454)
T 1cru_A 96 ISGTFKNPKS---------------------TDKE-LPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP 153 (454)
T ss_dssp EEEEEECTTC-----------------------CC-SCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT
T ss_pred EEEeccccCC---------------------Cccc-cccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC
Confidence 9885310000 0000 000035666665432 23445431 1 1 89999998
Q ss_pred cCCeEEEeecCceee----EEE---------------eecC-CCCceEEEeecCC-----------CeEEEeeCCCCCce
Q psy17325 323 ENGMLYYSTLKCTRW----LFW---------------TDWG-ENPRIERIGMDGS-----------NRSTIISTKIYWPN 371 (461)
Q Consensus 323 ~~~~lY~t~~~~~~~----l~~---------------~d~~-~~~~I~~~~~dG~-----------~~~~l~~~~l~~p~ 371 (461)
.|+||++....... ++- -+.. ..++|.|++.||+ ..+++ ...+.+|.
T Consensus 154 -DG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~-a~G~RNp~ 231 (454)
T 1cru_A 154 -DQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIY-TLGHRNPQ 231 (454)
T ss_dssp -TSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEE-EBCCSEEE
T ss_pred -CCeEEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEE-EECCCCcc
Confidence 56899985430000 000 0000 1478999999998 33444 48999999
Q ss_pred eEEEecCCCeEEEEcCCCC
Q psy17325 372 GLTLDIATRRVYFADSKLD 390 (461)
Q Consensus 372 glaiD~~~~~ly~~d~~~~ 390 (461)
||++|+ +++||++|.+.+
T Consensus 232 gla~dp-~G~L~~~d~g~~ 249 (454)
T 1cru_A 232 GLAFTP-NGKLLQSEQGPN 249 (454)
T ss_dssp EEEECT-TSCEEEEEECSS
T ss_pred eEEECC-CCCEEEEecCCC
Confidence 999997 799999997654
No 101
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.06 E-value=5e-08 Score=93.08 Aligned_cols=241 Identities=7% Similarity=-0.045 Sum_probs=146.1
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcE-EEEecCCC----CCceeEEEcCCCCceEEEEeecC----------
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLAKDNI----TQPRGMMLDPSPGTRWLFWTDWG---------- 214 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~-~~l~~~~~----~~p~~ia~d~~~g~~~ly~td~~---------- 214 (461)
.|.++++++.++.+|++....+.|.+.++..... ..+..... ..|.+++++|... +||+++.+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~--~l~~~~~~~~~~~~~~~~ 112 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGK--TLAIYESPVRLELTHFEV 112 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSS--EEEEEEEEEEECSSCEEE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCC--EEEEEecccccccccccc
Confidence 4889999988889999999999999999865443 33322211 1689999999877 89998511
Q ss_pred CCCcEEEEecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcce
Q psy17325 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294 (461)
Q Consensus 215 ~~~~I~~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~ 294 (461)
....|...++++......+.. -..|.++++++.++.||+++ +
T Consensus 113 ~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~---~---------------------------------- 154 (337)
T 1pby_B 113 QPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGLG---R---------------------------------- 154 (337)
T ss_dssp CCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEES---S----------------------------------
T ss_pred cCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEeC---C----------------------------------
Confidence 246888888875443333332 34689999999888899983 1
Q ss_pred eeeEEeCCCCceEEEEeCCe-eeeEEEeccCCeEEEeecCceee--EEEeecCCC---------CceEEEeecCCCeEEE
Q psy17325 295 KIGKANMDGSNASILVSGQL-YEALALDLENGMLYYSTLKCTRW--LFWTDWGEN---------PRIERIGMDGSNRSTI 362 (461)
Q Consensus 295 ~I~~~~~~g~~~~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~--l~~~d~~~~---------~~I~~~~~dG~~~~~l 362 (461)
.|.+.++........+.... +..+++.|.+..||++......+ +|....... ..|...++.......+
T Consensus 155 ~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 234 (337)
T 1pby_B 155 DLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMR 234 (337)
T ss_dssp SEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEE
T ss_pred eEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEe
Confidence 25555555443322222222 34456677777787765441111 222221111 0456666654443322
Q ss_pred -eeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeC
Q psy17325 363 -ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTE 441 (461)
Q Consensus 363 -~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~ 441 (461)
.......|.++++++++++||++ .+.|..+++. ++.....+... .. +..++++.++.+||++..
T Consensus 235 ~~~~~~~~~~~~~~s~dg~~l~~~---~~~v~~~d~~-~~~~~~~~~~~-~~----------~~~~~~s~dg~~l~~~~~ 299 (337)
T 1pby_B 235 EVRIMDVFYFSTAVNPAKTRAFGA---YNVLESFDLE-KNASIKRVPLP-HS----------YYSVNVSTDGSTVWLGGA 299 (337)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEE---ESEEEEEETT-TTEEEEEEECS-SC----------CCEEEECTTSCEEEEESB
T ss_pred ecCCCCCceeeEEECCCCCEEEEe---CCeEEEEECC-CCcCcceecCC-Cc----------eeeEEECCCCCEEEEEcC
Confidence 12334578899999888899999 4789999993 34433322211 11 123444445667777743
Q ss_pred CCcee
Q psy17325 442 GAEFL 446 (461)
Q Consensus 442 ~~~~i 446 (461)
.+.|
T Consensus 300 -~~~i 303 (337)
T 1pby_B 300 -LGDL 303 (337)
T ss_dssp -SSEE
T ss_pred -CCcE
Confidence 4444
No 102
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.05 E-value=8.9e-11 Score=99.12 Aligned_cols=98 Identities=30% Similarity=0.587 Sum_probs=76.7
Q ss_pred CCCCCCCC--------CCCC-CCCcccCCC-CCCC--CCceeCCCCceEeCCCCCeecCC--------CCceecCcceec
Q psy17325 17 DCPNGADE--------GPGC-DLAECKHKF-GLCS--NTCHPTPLGALCTCPPGEILSND--------SVTCQDMNECEQ 76 (461)
Q Consensus 17 dC~dg~de--------~~~C-~~~~C~~~~-~~C~--~~C~~~~~~~~C~C~~G~~l~~~--------~~~C~d~~eC~~ 76 (461)
.|+.|+-. +..| ++++|.... ..|. ..|++++++|.|.|++||.+... +..|++++||..
T Consensus 22 ~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~ 101 (143)
T 2bou_A 22 RCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSS 101 (143)
T ss_dssp EECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEEECCHHHH
T ss_pred eCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCccccccCCCCCcCCccCccC
Confidence 46766532 3578 689998653 3676 47999999999999999987533 458999999984
Q ss_pred -CCccc--CceeeccCCccccCCCCeeeeCCCCceeecccc
Q psy17325 77 -PGYCS--QMCTNTKGSYICSCNEGYVLEYDNHTCKAINHS 114 (461)
Q Consensus 77 -~~~C~--~~C~~~~g~~~C~C~~g~~l~~~~~~C~~~~~~ 114 (461)
...|. +.|+++.++|.|.|++||.+..+.+.|.+.+++
T Consensus 102 ~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~~~~~C 142 (143)
T 2bou_A 102 GQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQKDTVC 142 (143)
T ss_dssp TCCCCCTTSEEEECSSCEEEECCSSSCBCTTCCSSBTTCCB
T ss_pred cCCCCCCCCEEECCCCCEEeeCCCCcccCCCCccCccCCcc
Confidence 46786 699999999999999999998888888776544
No 103
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.01 E-value=3.6e-07 Score=89.78 Aligned_cols=236 Identities=14% Similarity=0.151 Sum_probs=132.7
Q ss_pred EEcCccceeeeeeeecCCeEEEEeC---------CCCeEEEEeCCCC-cEEEEecC---C---CCCceeEEEcCCCCceE
Q psy17325 144 VVSGLDLVEGLAYDWIGGHIYWLDS---------RLNRIEVCDENGT-NRIVLAKD---N---ITQPRGMMLDPSPGTRW 207 (461)
Q Consensus 144 ~~~g~~~p~~iavd~~~~~ly~~d~---------~~~~I~~~~~~G~-~~~~l~~~---~---~~~p~~ia~d~~~g~~~ 207 (461)
+..|. .| ++++.+.++.||+++. ..+.|.+++.... ....+... . ...|++++++|..+ +
T Consensus 63 i~~g~-~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~--~ 138 (373)
T 2mad_H 63 VNGGF-LP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNA--D 138 (373)
T ss_pred ecCCC-CC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCC--E
Confidence 33453 46 9999999999999985 3577999998643 22322211 0 14699999999977 9
Q ss_pred EEEeecCCCCcEEEEecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEec
Q psy17325 208 LFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDE 287 (461)
Q Consensus 208 ly~td~~~~~~I~~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~ 287 (461)
||++.......|..++ ..... +.. -+..|.++.+.+...+.|++....+.
T Consensus 139 l~v~n~~~~~~v~viD-~t~~~--~~~-~i~~~~~~~~~~~~~~~~~~~~~dg~-------------------------- 188 (373)
T 2mad_H 139 LLFFQFAAGPAVGLVV-QGGSS--DDQ-LLSSPTCYHIHPGAPSTFYLLCAQGG-------------------------- 188 (373)
T ss_pred EEEEecCCCCeEEEEE-CCCCE--EeE-EcCCCceEEEEeCCCceEEEEcCCCC--------------------------
Confidence 9999844346788887 54322 211 02335556666667777776655432
Q ss_pred CCCCcceeeeEEeCCCCceEEEE-----eCCee--eeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeE
Q psy17325 288 GGNGVPLKIGKANMDGSNASILV-----SGQLY--EALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS 360 (461)
Q Consensus 288 ~~~~~~~~I~~~~~~g~~~~~l~-----~~~~p--~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~ 360 (461)
+...+.+|+...... ....| ...++.+.++.+||... .+.++.+++.+...+
T Consensus 189 --------~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-------------~~~v~vid~~~~~~~ 247 (373)
T 2mad_H 189 --------LAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVY-------------SGKILQADISAAGAT 247 (373)
T ss_pred --------EEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEEEEcC-------------CceEEEEeccCCcce
Confidence 222222222111110 01112 12334445566665542 235555555443222
Q ss_pred EEee---------CCCCCcee---EEEecCCCeEEEEcC---------CCCeEEEEEecCCCCeEEEEEccccceeeccC
Q psy17325 361 TIIS---------TKIYWPNG---LTLDIATRRVYFADS---------KLDFIDFCNYDGTGRQQVILIDLMVEFTNDLM 419 (461)
Q Consensus 361 ~l~~---------~~l~~p~g---laiD~~~~~ly~~d~---------~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~ 419 (461)
++.. .....|.| +++++++++||++.. ..+.|..+|+. ++.....+....
T Consensus 248 v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~-t~~vv~~i~~g~-------- 318 (373)
T 2mad_H 248 NKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGL-VGQTSSQISLGH-------- 318 (373)
T ss_pred EeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECC-CCEEEEEEECCC--------
Confidence 2110 11123666 899999999999754 24689999993 344323332111
Q ss_pred CCCCcceEEEeeeCC-EEEEEeCCCcee
Q psy17325 420 GDNGVPALALDLENG-MLYYSTEGAEFL 446 (461)
Q Consensus 420 ~~~~~~~~~l~~~~~-~lYwtd~~~~~i 446 (461)
.+..++++.++. .+|.+.+.++.|
T Consensus 319 ---~p~~i~~s~Dg~~~l~v~~~~~~~V 343 (373)
T 2mad_H 319 ---DVDAISVAQDGGPDLYALSAGTEVL 343 (373)
T ss_pred ---CcCeEEECCCCCeEEEEEcCCCCeE
Confidence 123566777777 788888766655
No 104
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.00 E-value=4.1e-11 Score=97.52 Aligned_cols=77 Identities=34% Similarity=0.856 Sum_probs=57.2
Q ss_pred CCcccC--CCCCCCCCceeCCCCceEeCCCCCeecCCCCceecCcceecCCcccCceeeccCCccccCCCCeeeeCC-CC
Q psy17325 30 LAECKH--KFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYD-NH 106 (461)
Q Consensus 30 ~~~C~~--~~~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~~C~~~~g~~~C~C~~g~~l~~~-~~ 106 (461)
+++|.. .+..|...|.+ .++|.|.|++||.+.. +..|++++||.....|.+.|+++.++|.|.|++||.+..+ ++
T Consensus 39 ~~~C~~~C~~~~C~~~C~~-~~~y~C~C~~Gy~~~~-g~~C~dideC~~~~~C~~~C~n~~g~y~C~C~~G~~g~~~~g~ 116 (118)
T 1dx5_I 39 PHRCQMFCNQTACPADCDP-NTQASCECPEGYILDD-GFICTDIDECENGGFCSGVCHNLPGTFECICGPDSALAGQIGT 116 (118)
T ss_dssp EEEEEECCCSSEEECEECT-TSTTCEECCTTEEEET-TTEEEECCHHHHCSSCSSEEEECSSSEEEEECSSSSCEEEESC
T ss_pred CCccccccCCCCCCCcccC-CCCeEeECCCCccCCC-CCccccccccCCCCCCcCeEEeCCCCEEEECCCCCccCCCCCC
Confidence 345542 23445567777 5788999999998755 7889999999765678788999999999999999976654 44
Q ss_pred ce
Q psy17325 107 TC 108 (461)
Q Consensus 107 ~C 108 (461)
+|
T Consensus 117 ~C 118 (118)
T 1dx5_I 117 DC 118 (118)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 105
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=99.00 E-value=1.3e-10 Score=102.20 Aligned_cols=80 Identities=26% Similarity=0.564 Sum_probs=36.7
Q ss_pred CCCcccCCCCCCCCCceeCCCCceEeCCCCCeecCCCCceec-C-cceec-CCcccCceeeccCCccccCCCCeeeeCCC
Q psy17325 29 DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQD-M-NECEQ-PGYCSQMCTNTKGSYICSCNEGYVLEYDN 105 (461)
Q Consensus 29 ~~~~C~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~d-~-~eC~~-~~~C~~~C~~~~g~~~C~C~~g~~l~~~~ 105 (461)
++++|..+++.-...|.+..++|.|.|++||. +..|++ + ++|.. +..|.+.|.+..++|.|.|++||.+..++
T Consensus 41 dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~----G~~Ce~~i~deC~~~~~~C~~~C~n~~gsy~C~C~~Gy~l~~dG 116 (195)
T 1nfu_B 41 DGDQCETSPCQNQGKCKDGLGEYTCTCLEGFE----GKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNG 116 (195)
T ss_dssp --------------------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTS
T ss_pred CCcccCCCCCCCCCEeECCCCCeeEeCCCCce----eccccccccccccCCCCCCCCEeECCCCCeEEECCCCceeCCCC
Confidence 68899865532234799999999999999996 678987 5 89984 46799999999999999999999999999
Q ss_pred Cceeecc
Q psy17325 106 HTCKAIN 112 (461)
Q Consensus 106 ~~C~~~~ 112 (461)
+.|.++.
T Consensus 117 ~~C~~~~ 123 (195)
T 1nfu_B 117 KACIPTG 123 (195)
T ss_dssp SCEEESS
T ss_pred CccccCC
Confidence 9998764
No 106
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.99 E-value=3.7e-10 Score=91.24 Aligned_cols=67 Identities=30% Similarity=0.553 Sum_probs=57.5
Q ss_pred CceeCCCCceEeCCCCCeecCCCCceecC---ccee-cCCcccCceeeccCCccccCCCCeeeeCCCCceeeccc
Q psy17325 43 TCHPTPLGALCTCPPGEILSNDSVTCQDM---NECE-QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINH 113 (461)
Q Consensus 43 ~C~~~~~~~~C~C~~G~~l~~~~~~C~d~---~eC~-~~~~C~~~C~~~~g~~~C~C~~g~~l~~~~~~C~~~~~ 113 (461)
.|++..++|.|.|++||. +..|+++ ++|. .++.|.+.|.++.++|.|.|++||.+..+++.|.++.+
T Consensus 27 ~C~~~~~~y~C~C~~G~~----G~~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~~~~~g~~C~~~~~ 97 (114)
T 1aut_L 27 TCIDGIGSFSCDCRSGWE----GRFCQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVK 97 (114)
T ss_dssp EECCCSSCCCEEECTTEE----STTSCEECCSSSSSSGGGGCSSEEEECSSSEEEECCTTEEECTTSSCEEECSS
T ss_pred CCCCCCCCcEeeCCCCCc----CCCcCcCCcCCcCcCCCCCCCCEeECCCCCEEeECCCCeeECCCCCccCcCcc
Confidence 588899999999999996 5669875 4687 35679999999999999999999999999999987543
No 107
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.98 E-value=2e-07 Score=91.00 Aligned_cols=174 Identities=11% Similarity=-0.004 Sum_probs=103.0
Q ss_pred CCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecC--CCCcEEEEe-cccccceeEEeeccCCee--EEecCCCceeee
Q psy17325 190 NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD--GSNRSTIIS-TKIYWPNGLTLDIATRRV--YFADSKLDFIDC 264 (461)
Q Consensus 190 ~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~d--G~~~~~i~~-~~~~~P~glavD~~~~~l--y~~d~~~~~i~~ 264 (461)
....|..++++|... +||.++.. .|...+++ |... .+.. .....|..+++++.++.| |.++... +..
T Consensus 38 ~~~~~~~~a~spdg~--~l~~~~~~---~v~~~~~~~~g~~~-~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~--~~~ 109 (365)
T 1jof_A 38 QDEPISWMTFDHERK--NIYGAAMK---KWSSFAVKSPTEIV-HEASHPIGGHPRANDADTNTRAIFLLAAKQPP--YAV 109 (365)
T ss_dssp TTCCCSEEEECTTSS--EEEEEEBT---EEEEEEEEETTEEE-EEEEEECCSSGGGGCTTSCCEEEEEEECSSTT--CCE
T ss_pred CCCCCcEEEECCCCC--EEEEEccc---eEEEEEECCCCCEE-EeeEeecCCCCccEEECCCCCEEEEEEecCCc--cee
Confidence 345799999999876 89998843 66666664 4322 2222 111358889999877754 4444110 000
Q ss_pred cccceeeeeccceeeeEEEEEecCCCCcceeeeE--EeCCCCceEEEEe----CCe-eeeEEEeccCCeEEEeecCceee
Q psy17325 265 KSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGK--ANMDGSNASILVS----GQL-YEALALDLENGMLYYSTLKCTRW 337 (461)
Q Consensus 265 ~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~--~~~~g~~~~~l~~----~~~-p~~iavd~~~~~lY~t~~~~~~~ 337 (461)
+.+-+|- .. +.+.+ .+.+|+....+.. ... |.+++++|.++.||+++.+
T Consensus 110 --------------~~~~~~~--~~----g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~---- 165 (365)
T 1jof_A 110 --------------YANPFYK--FA----GYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLT---- 165 (365)
T ss_dssp --------------EEEEESS--SC----CEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT----
T ss_pred --------------ccceeec--CC----ceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCC----
Confidence 0000000 00 12333 3334544333321 222 9999999998889988766
Q ss_pred EEEeecCCCCceEEEeec--CCCeEE-Eee-C-CCCCceeEEEecCCCeEEEEcCCCCeEEEEEecC-CCCe
Q psy17325 338 LFWTDWGENPRIERIGMD--GSNRST-IIS-T-KIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG-TGRQ 403 (461)
Q Consensus 338 l~~~d~~~~~~I~~~~~d--G~~~~~-l~~-~-~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g-~g~~ 403 (461)
..+|...+++ |+...+ .+. . ....|.++++++++++||+++...+.|..++++. +|..
T Consensus 166 --------~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~ 229 (365)
T 1jof_A 166 --------ANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMP 229 (365)
T ss_dssp --------TTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred --------CCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcE
Confidence 5677777775 332211 111 1 2457999999988889999988888998888743 3543
No 108
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.98 E-value=7.9e-08 Score=95.64 Aligned_cols=248 Identities=13% Similarity=0.068 Sum_probs=142.5
Q ss_pred EEcCccceeeeeeeecCCeEEEEeC---------CCCeEEEEeCCCCc-EEEEecC---C---CCCceeEEEcCCCCceE
Q psy17325 144 VVSGLDLVEGLAYDWIGGHIYWLDS---------RLNRIEVCDENGTN-RIVLAKD---N---ITQPRGMMLDPSPGTRW 207 (461)
Q Consensus 144 ~~~g~~~p~~iavd~~~~~ly~~d~---------~~~~I~~~~~~G~~-~~~l~~~---~---~~~p~~ia~d~~~g~~~ 207 (461)
+..|. .| ++++++.++.||+++. ..+.|.++|..... ...+... . ...|.+++++|..+ +
T Consensus 115 I~vG~-~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk--~ 190 (426)
T 3c75_H 115 TDGGF-LP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNK--N 190 (426)
T ss_dssp EEECS-SC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSS--E
T ss_pred EECCC-CC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCC--E
Confidence 34454 58 9999999999999996 45789999976544 3333221 0 24699999999987 9
Q ss_pred EEEeecCCCCcEEEEecCCCCcE-EEEecc--ccccee----EEeeccCCeeEEecCCCceeeec-----ccceee---e
Q psy17325 208 LFWTDWGENPRIERIGMDGSNRS-TIISTK--IYWPNG----LTLDIATRRVYFADSKLDFIDCK-----SLEIKT---N 272 (461)
Q Consensus 208 ly~td~~~~~~I~~~~~dG~~~~-~i~~~~--~~~P~g----lavD~~~~~ly~~d~~~~~i~~~-----~~~~~~---~ 272 (461)
||++++.....|..+++...... .|-..+ ...|.| +++...+. ++|.+.....+... ....+. .
T Consensus 191 lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~-~~~V~~~~~~v~~~~~~~~~v~~~p~~~~ 269 (426)
T 3c75_H 191 LLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGS-LARVDFADGETKVTNTEVFHTEDELLINH 269 (426)
T ss_dssp EEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSS-EEEEECCTTCCEEEECCCCSCTTSCBCSC
T ss_pred EEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCC-EEEEECCCCcEEEEeeeeeccCCCceeeE
Confidence 99998543568888888753322 221111 122444 55655443 43333343332210 000000 0
Q ss_pred eccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEe------C----Ce-eee---EEEeccCCeEEEeecCceeeE
Q psy17325 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS------G----QL-YEA---LALDLENGMLYYSTLKCTRWL 338 (461)
Q Consensus 273 v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~------~----~~-p~~---iavd~~~~~lY~t~~~~~~~l 338 (461)
+.+....+.+|++... +++++++..+....++.. . .. |.+ +++++.+++||+++... -
T Consensus 270 ~~~~~dg~~~~~~s~~-----g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~---~ 341 (426)
T 3c75_H 270 PAFSLRSGRLVWPTYT-----GKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQR---D 341 (426)
T ss_dssp CEECTTTCEEEEEBTT-----SEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEEC---C
T ss_pred eeecCCCCEEEEEeCC-----CcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEeccc---c
Confidence 0001112355665432 368888887665443321 0 11 555 99999999999986420 0
Q ss_pred EEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCC-eEEEEcCCCCeEEEEEecCCCCeEEE
Q psy17325 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR-RVYFADSKLDFIDFCNYDGTGRQQVI 406 (461)
Q Consensus 339 ~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~-~ly~~d~~~~~I~~~~~~g~g~~~~~ 406 (461)
.++.....+.|...++.-.....-+ .--..|.+|+++++++ +||++....+.|..+|+. ++.....
T Consensus 342 ~gthk~~s~~VsVID~~T~kvv~~I-~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~-t~kvv~t 408 (426)
T 3c75_H 342 EWKHKAASRFVVVLNAETGERINKI-ELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAA-TGEELRS 408 (426)
T ss_dssp TTCTTSCEEEEEEEETTTCCEEEEE-EEEEEECEEEECCSSSCEEEEEETTTTEEEEEETT-TCCEEEE
T ss_pred cccccCCCCEEEEEECCCCeEEEEE-ECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECC-CCCEEEE
Confidence 0000001234655555433222111 1112599999998888 999999999999999993 5555433
No 109
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.97 E-value=4.1e-07 Score=83.58 Aligned_cols=192 Identities=15% Similarity=0.103 Sum_probs=116.6
Q ss_pred ceeeeeeeecCCeEEEEeCCCC--eEEEEeCC-CCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCC
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLN--RIEVCDEN-GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~--~I~~~~~~-G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG 226 (461)
...||+++ ++.||.+....+ +|.++++. |+....+.-..-.-..||+++ .+ .||.+.|.+ ..+...+.+.
T Consensus 44 ftqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~--~ly~ltw~~-~~v~v~D~~t 116 (262)
T 3nol_A 44 FTEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KD--KIVGLTWKN-GLGFVWNIRN 116 (262)
T ss_dssp EEEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TT--EEEEEESSS-SEEEEEETTT
T ss_pred ccceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CC--EEEEEEeeC-CEEEEEECcc
Confidence 34889998 689999987655 89999976 444443322221123556776 45 899999754 5888888865
Q ss_pred CCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCce
Q psy17325 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306 (461)
Q Consensus 227 ~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~ 306 (461)
.....-+... ..+.||+- .+++||.+|. ++. |++.|.....+..+|.+
T Consensus 117 ~~~~~ti~~~-~eG~glt~--dg~~L~~SdG-s~~--------------------i~~iDp~T~~v~~~I~V-------- 164 (262)
T 3nol_A 117 LRQVRSFNYD-GEGWGLTH--NDQYLIMSDG-TPV--------------------LRFLDPESLTPVRTITV-------- 164 (262)
T ss_dssp CCEEEEEECS-SCCCCEEE--CSSCEEECCS-SSE--------------------EEEECTTTCSEEEEEEC--------
T ss_pred CcEEEEEECC-CCceEEec--CCCEEEEECC-CCe--------------------EEEEcCCCCeEEEEEEe--------
Confidence 4332222221 13445554 4899999996 432 34444443211111111
Q ss_pred EEEEeCCe----eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEee-cCCCeEEEeeC-----------CCCCc
Q psy17325 307 SILVSGQL----YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM-DGSNRSTIIST-----------KIYWP 370 (461)
Q Consensus 307 ~~l~~~~~----p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~-dG~~~~~l~~~-----------~l~~p 370 (461)
...+. ++.+.. .+|+||.+... ...|.+.+. +|+-...|-.. ...-|
T Consensus 165 ---~~~g~~~~~lNELe~--~~G~lyan~w~------------~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vl 227 (262)
T 3nol_A 165 ---TAHGEELPELNELEW--VDGEIFANVWQ------------TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVL 227 (262)
T ss_dssp ---EETTEECCCEEEEEE--ETTEEEEEETT------------SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCE
T ss_pred ---ccCCccccccceeEE--ECCEEEEEEcc------------CCeEEEEECCCCcEEEEEECCcCccccccccCcCCce
Confidence 11111 334443 47888877655 456666665 33333333222 23468
Q ss_pred eeEEEecCCCeEEEEcCCCCeEEEEEe
Q psy17325 371 NGLTLDIATRRVYFADSKLDFIDFCNY 397 (461)
Q Consensus 371 ~glaiD~~~~~ly~~d~~~~~I~~~~~ 397 (461)
+|||+|+.+++||++...=.+++.+.+
T Consensus 228 NGIA~dp~~~~lfVTGK~Wp~~~ev~~ 254 (262)
T 3nol_A 228 NGIAWDKEHHRLFVTGKLWPKVFEITL 254 (262)
T ss_dssp EEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred EEEEEcCCCCEEEEECCCCCceEEEEE
Confidence 999999999999999888888988887
No 110
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.97 E-value=9.7e-08 Score=87.78 Aligned_cols=191 Identities=14% Similarity=0.135 Sum_probs=117.8
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCC-CCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCC
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDEN-GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~-G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~ 228 (461)
...||.++ ++.||.+....++|.++++. |+....++... .-..||+++ .+ .||.+.|.+ ..+...+.+...
T Consensus 56 ftqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~-~FgeGit~~--g~--~Ly~ltw~~-~~v~V~D~~Tl~ 127 (268)
T 3nok_A 56 FTQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWMERLGN-IFAEGLASD--GE--RLYQLTWTE-GLLFTWSGMPPQ 127 (268)
T ss_dssp CEEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEEECTT-CCEEEEEEC--SS--CEEEEESSS-CEEEEEETTTTE
T ss_pred ccceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEECCCC-cceeEEEEe--CC--EEEEEEccC-CEEEEEECCcCc
Confidence 34788887 68999999999999999975 55444443321 123557776 34 899999754 588888876433
Q ss_pred cEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEE
Q psy17325 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308 (461)
Q Consensus 229 ~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~ 308 (461)
...-+... ..+.||+-| +++||.+|. ++. |++.|.....+..+|.+
T Consensus 128 ~~~ti~~~-~eGwGLt~D--g~~L~vSdG-s~~--------------------l~~iDp~T~~v~~~I~V---------- 173 (268)
T 3nok_A 128 RERTTRYS-GEGWGLCYW--NGKLVRSDG-GTM--------------------LTFHEPDGFALVGAVQV---------- 173 (268)
T ss_dssp EEEEEECS-SCCCCEEEE--TTEEEEECS-SSE--------------------EEEECTTTCCEEEEEEC----------
T ss_pred EEEEEeCC-CceeEEecC--CCEEEEECC-CCE--------------------EEEEcCCCCeEEEEEEe----------
Confidence 22222221 234566655 799999995 433 34444333211111111
Q ss_pred EEeCCe----eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEee-cCCCeEEEeeC------------CCCCce
Q psy17325 309 LVSGQL----YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM-DGSNRSTIIST------------KIYWPN 371 (461)
Q Consensus 309 l~~~~~----p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~-dG~~~~~l~~~------------~l~~p~ 371 (461)
...+. ++.|. +.+|+||.+... ...|.+.+. +|+-...|-.. ...-|+
T Consensus 174 -~~~g~~v~~lNeLe--~~dG~lyanvw~------------s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlN 238 (268)
T 3nok_A 174 -KLRGQPVELINELE--CANGVIYANIWH------------SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLN 238 (268)
T ss_dssp -EETTEECCCEEEEE--EETTEEEEEETT------------CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEE
T ss_pred -CCCCcccccccccE--EeCCEEEEEECC------------CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceE
Confidence 11111 34444 447888877655 556777765 33333333211 234689
Q ss_pred eEEEecCCCeEEEEcCCCCeEEEEEe
Q psy17325 372 GLTLDIATRRVYFADSKLDFIDFCNY 397 (461)
Q Consensus 372 glaiD~~~~~ly~~d~~~~~I~~~~~ 397 (461)
|||+|+.+++||++...=.+++.+.+
T Consensus 239 GIA~dp~~~rlfVTGK~Wp~~~ev~~ 264 (268)
T 3nok_A 239 GIAVEPGSGRIFMTGKLWPRLFEVRL 264 (268)
T ss_dssp EEEECTTTCCEEEEETTCSEEEEEEE
T ss_pred EEEEcCCCCEEEEeCCCCCceEEEEE
Confidence 99999999999999888888888877
No 111
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.95 E-value=1.2e-06 Score=79.79 Aligned_cols=193 Identities=17% Similarity=0.118 Sum_probs=115.8
Q ss_pred cceeeeeeeecCCeEEEEeCCC--CeEEEEeCCC-CcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecC
Q psy17325 149 DLVEGLAYDWIGGHIYWLDSRL--NRIEVCDENG-TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD 225 (461)
Q Consensus 149 ~~p~~iavd~~~~~ly~~d~~~--~~I~~~~~~G-~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~d 225 (461)
....|++++ .+.||.+.... .+|.++++.. +....+.-....-+.||+++ .+ .||...|.+ .++...+.+
T Consensus 21 ~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~--~ly~ltw~~-~~v~v~D~~ 93 (243)
T 3mbr_X 21 AFTEGLFYL--RGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RD--RLIQLTWRN-HEGFVYDLA 93 (243)
T ss_dssp CCEEEEEEE--TTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TT--EEEEEESSS-SEEEEEETT
T ss_pred cccccEEEE--CCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CC--EEEEEEeeC-CEEEEEECC
Confidence 456899998 48999997764 5899999764 44333322222224566666 45 899999764 588888886
Q ss_pred CCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCc
Q psy17325 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305 (461)
Q Consensus 226 G~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~ 305 (461)
......-+... ..+.||+ +.+++||.+|. ++. |+..|.....+..+|.+
T Consensus 94 tl~~~~ti~~~-~~Gwglt--~dg~~L~vSdg-s~~--------------------l~~iDp~t~~~~~~I~V------- 142 (243)
T 3mbr_X 94 TLTPRARFRYP-GEGWALT--SDDSHLYMSDG-TAV--------------------IRKLDPDTLQQVGSIKV------- 142 (243)
T ss_dssp TTEEEEEEECS-SCCCEEE--ECSSCEEEECS-SSE--------------------EEEECTTTCCEEEEEEC-------
T ss_pred cCcEEEEEeCC-CCceEEe--eCCCEEEEECC-CCe--------------------EEEEeCCCCeEEEEEEE-------
Confidence 43322222221 2344555 55899999996 433 23333322111111111
Q ss_pred eEEEEeCCe----eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEee-cCCCeEEEeeC------------CCC
Q psy17325 306 ASILVSGQL----YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM-DGSNRSTIIST------------KIY 368 (461)
Q Consensus 306 ~~~l~~~~~----p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~-dG~~~~~l~~~------------~l~ 368 (461)
...+. ++. +++.+|+||..... ...|.+.+. +|+-...+-.. ...
T Consensus 143 ----~~~g~~~~~lNe--Le~~~G~lyanvw~------------s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~ 204 (243)
T 3mbr_X 143 ----TAGGRPLDNLNE--LEWVNGELLANVWL------------TSRIARIDPASGKVVAWIDLQALVPDADALTDSTND 204 (243)
T ss_dssp ----EETTEECCCEEE--EEEETTEEEEEETT------------TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSS
T ss_pred ----ccCCccccccee--eEEeCCEEEEEECC------------CCeEEEEECCCCCEEEEEECCcCccccccccCCcCC
Confidence 11111 233 44558888876655 456666665 33333333211 234
Q ss_pred CceeEEEecCCCeEEEEcCCCCeEEEEEe
Q psy17325 369 WPNGLTLDIATRRVYFADSKLDFIDFCNY 397 (461)
Q Consensus 369 ~p~glaiD~~~~~ly~~d~~~~~I~~~~~ 397 (461)
-|+|||+|+.+++||++...=.+++.+.+
T Consensus 205 vlNGIA~d~~~~~lfVTGK~wp~~~~v~~ 233 (243)
T 3mbr_X 205 VLNGIAFDAEHDRLFVTGKRWPMLYEIRL 233 (243)
T ss_dssp CEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred ceEEEEEcCCCCEEEEECCCCCcEEEEEE
Confidence 68999999999999999888889999888
No 112
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.95 E-value=5.1e-07 Score=86.51 Aligned_cols=102 Identities=14% Similarity=0.105 Sum_probs=71.6
Q ss_pred eeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEec-CCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEE
Q psy17325 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK-DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRST 231 (461)
Q Consensus 153 ~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~-~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~ 231 (461)
|+++. .++.+|++....++|.+.++........+. .....|.+++++|..+ ++|++. .....|...+++......
T Consensus 4 g~~~~-~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~--~~~v~~-~~~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 4 GPALK-AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNR--TAYVLN-NHYGDIYGIDLDTCKNTF 79 (349)
T ss_dssp CCCCC-TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSS--EEEEEE-TTTTEEEEEETTTTEEEE
T ss_pred ccccc-CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCC--EEEEEe-CCCCcEEEEeCCCCcEEE
Confidence 45554 467899999999999999987554333332 2222699999999876 899988 455789999887543332
Q ss_pred EEec-c-----cccceeEEeeccCCeeEEecCC
Q psy17325 232 IIST-K-----IYWPNGLTLDIATRRVYFADSK 258 (461)
Q Consensus 232 i~~~-~-----~~~P~glavD~~~~~ly~~d~~ 258 (461)
.+.. . ...|.++++++.++.||++...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 112 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNP 112 (349)
T ss_dssp EEESCCSTTEEEECSSCEEECTTSSEEEEEEEE
T ss_pred EEEcccccccccccccceEECCCCCEEEEEccc
Confidence 2221 1 2248999999989999988743
No 113
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.95 E-value=2.7e-10 Score=94.81 Aligned_cols=81 Identities=26% Similarity=0.552 Sum_probs=36.9
Q ss_pred CCCcccCCCCCCCCCceeCCCCceEeCCCCCeecCCCCceec-C-cceec-CCcccCceeeccCCccccCCCCeeeeCCC
Q psy17325 29 DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQD-M-NECEQ-PGYCSQMCTNTKGSYICSCNEGYVLEYDN 105 (461)
Q Consensus 29 ~~~~C~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~d-~-~eC~~-~~~C~~~C~~~~g~~~C~C~~g~~l~~~~ 105 (461)
++++|..++..-...|.+..++|.|.|++||. +..|++ + ++|.. +..|.+.|.++.++|.|.|++||.+..++
T Consensus 41 d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~----G~~C~~~i~d~C~~~~~~C~~~C~~~~g~y~C~C~~Gy~l~~~g 116 (134)
T 2vh0_B 41 DGDQCETSPCQNQGKCKDGLGEYTCTCLEGFE----GKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNG 116 (134)
T ss_dssp --------------------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTS
T ss_pred CcCcCCCCCCCCcCCcccCCCCEEeeCCCCcc----CCccccCCCCccccCCCCCCCEeECCCCCEEEECCCCcEECCCC
Confidence 67888765422234799999999999999996 678988 6 88974 45798999999999999999999999999
Q ss_pred Cceeeccc
Q psy17325 106 HTCKAINH 113 (461)
Q Consensus 106 ~~C~~~~~ 113 (461)
+.|.++++
T Consensus 117 ~~C~~~~~ 124 (134)
T 2vh0_B 117 KACIPTGP 124 (134)
T ss_dssp SCEEESSS
T ss_pred CccCcCCC
Confidence 99987654
No 114
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.93 E-value=6.7e-07 Score=92.38 Aligned_cols=194 Identities=10% Similarity=0.014 Sum_probs=131.1
Q ss_pred eeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecC-CCCcE-EE
Q psy17325 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD-GSNRS-TI 232 (461)
Q Consensus 155 avd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~d-G~~~~-~i 232 (461)
++++ .+.+|++....+.|.+.+.........+... ..|.+++++|..+ +||.++.. ..|...+++ .+... .-
T Consensus 144 ~~~p-~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g-~~~~~v~~spdg~--~l~v~~~d--~~V~v~D~~~~t~~~~~~ 217 (543)
T 1nir_A 144 DLDL-PNLFSVTLRDAGQIALVDGDSKKIVKVIDTG-YAVHISRMSASGR--YLLVIGRD--ARIDMIDLWAKEPTKVAE 217 (543)
T ss_dssp CCCG-GGEEEEEEGGGTEEEEEETTTCCEEEEEECS-TTEEEEEECTTSC--EEEEEETT--SEEEEEETTSSSCEEEEE
T ss_pred ccCC-CCEEEEEEcCCCeEEEEECCCceEEEEEecC-cccceEEECCCCC--EEEEECCC--CeEEEEECcCCCCcEEEE
Confidence 4665 5689999999999999997654443333323 2389999999977 99999843 789999984 12221 11
Q ss_pred EecccccceeEEeec----cCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCC-CceE
Q psy17325 233 ISTKIYWPNGLTLDI----ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG-SNAS 307 (461)
Q Consensus 233 ~~~~~~~P~glavD~----~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g-~~~~ 307 (461)
+. .-..|.++++++ .+++||.+....+.| .+.+... +...
T Consensus 218 i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v----------------------------------~v~D~~t~~~~~ 262 (543)
T 1nir_A 218 IK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQF----------------------------------AIMDGETLEPKQ 262 (543)
T ss_dssp EE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEE----------------------------------EEEETTTCCEEE
T ss_pred Ee-cCCCcceEEeCCCcCCCCCEEEEEEccCCeE----------------------------------EEEeccccccce
Confidence 22 234799999999 899999988655433 2333221 1112
Q ss_pred EEEe-----------CC-eeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecC-CCeEE-EeeCCCCCceeE
Q psy17325 308 ILVS-----------GQ-LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG-SNRST-IISTKIYWPNGL 373 (461)
Q Consensus 308 ~l~~-----------~~-~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG-~~~~~-l~~~~l~~p~gl 373 (461)
++-. .. .+.+|++.+.++.+|++... .++|...+... ....+ .+ ..-.+|.++
T Consensus 263 ~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~------------~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~ 329 (543)
T 1nir_A 263 IVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE------------TGKVLLVNYKDIDNLTVTSI-GAAPFLHDG 329 (543)
T ss_dssp EEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT------------TTEEEEEECTTSSSCEEEEE-ECCSSCCCE
T ss_pred eecccCcccCccccccCCceEEEEECCCCCEEEEEECC------------CCeEEEEEecCCCcceeEEe-ccCcCccCc
Confidence 2111 11 26788999888888888766 66777777643 22221 22 234679999
Q ss_pred EEecCCCeEEEEcCCCCeEEEEEecCCCCe
Q psy17325 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403 (461)
Q Consensus 374 aiD~~~~~ly~~d~~~~~I~~~~~~g~g~~ 403 (461)
++|+++++||++....++|..+++. +|..
T Consensus 330 ~~spdg~~l~va~~~~~~v~v~D~~-tg~l 358 (543)
T 1nir_A 330 GWDSSHRYFMTAANNSNKVAVIDSK-DRRL 358 (543)
T ss_dssp EECTTSCEEEEEEGGGTEEEEEETT-TTEE
T ss_pred eECCCCCEEEEEecCCCeEEEEECC-CCeE
Confidence 9998888899998888999999993 5544
No 115
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.92 E-value=6.1e-07 Score=88.67 Aligned_cols=219 Identities=15% Similarity=0.084 Sum_probs=131.0
Q ss_pred EcCccceeeeeeeecCCeEEEEeCCC------CeEEEEeCCCCc-EEEEecCCCC--CceeEEEcCCCCceEEEEeecC-
Q psy17325 145 VSGLDLVEGLAYDWIGGHIYWLDSRL------NRIEVCDENGTN-RIVLAKDNIT--QPRGMMLDPSPGTRWLFWTDWG- 214 (461)
Q Consensus 145 ~~g~~~p~~iavd~~~~~ly~~d~~~------~~I~~~~~~G~~-~~~l~~~~~~--~p~~ia~d~~~g~~~ly~td~~- 214 (461)
..|...|.++..-+.+ ||++..++ +.|.+.|..... ...+-..... -+..+.+.|..+ .||.++|+
T Consensus 134 ~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~--~mvsS~wg~ 209 (462)
T 2ece_A 134 VSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNE--VLVSSEWAV 209 (462)
T ss_dssp HHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTT--EEEECBCCC
T ss_pred ccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCC--EEEEccCcC
Confidence 3466678888887544 99987766 789999977544 3333222111 233466688877 99999985
Q ss_pred ----------------CCCcEEEEecCCCCcEEEEec--ccccceeEEe--eccCCeeEEecC-----CCceeeecccce
Q psy17325 215 ----------------ENPRIERIGMDGSNRSTIIST--KIYWPNGLTL--DIATRRVYFADS-----KLDFIDCKSLEI 269 (461)
Q Consensus 215 ----------------~~~~I~~~~~dG~~~~~i~~~--~~~~P~glav--D~~~~~ly~~d~-----~~~~i~~~~~~~ 269 (461)
...+|...+++......-+.. .-..|..|++ ++.++.+|++.. .++.|.
T Consensus 210 p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~------ 283 (462)
T 2ece_A 210 PNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIW------ 283 (462)
T ss_dssp HHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEE------
T ss_pred ccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEE------
Confidence 246888888875321111221 1136888766 998999999887 665442
Q ss_pred eeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCce-EEEE--------eCCeeeeEEEeccCCeEEEeecCceeeEEE
Q psy17325 270 KTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA-SILV--------SGQLYEALALDLENGMLYYSTLKCTRWLFW 340 (461)
Q Consensus 270 ~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~-~~l~--------~~~~p~~iavd~~~~~lY~t~~~~~~~l~~ 340 (461)
+|+-|.+.. ..+.++++..... ..+- ....|.+|++.+.+++||+++.+
T Consensus 284 ------------v~~~d~g~~---~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg------- 341 (462)
T 2ece_A 284 ------------LWFYEDGKW---NAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWG------- 341 (462)
T ss_dssp ------------EEEEETTEE---EEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETT-------
T ss_pred ------------EEEecCCce---eEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCC-------
Confidence 122222110 1112211111000 0000 01238999999999999998877
Q ss_pred eecCCCCceEEEeec-CCCeEEEe--eCC-C-------------CCceeEEEecCCCeEEEEcC-------------CCC
Q psy17325 341 TDWGENPRIERIGMD-GSNRSTII--STK-I-------------YWPNGLTLDIATRRVYFADS-------------KLD 390 (461)
Q Consensus 341 ~d~~~~~~I~~~~~d-G~~~~~l~--~~~-l-------------~~p~glaiD~~~~~ly~~d~-------------~~~ 390 (461)
.+.|...+++ ....+.+. ..+ . ..|.++++++++++||++.. ...
T Consensus 342 -----~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaNsl~~~wd~Qfyp~~~~~ 416 (462)
T 2ece_A 342 -----IGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTNSLYSTWDNQFYPEGLKG 416 (462)
T ss_dssp -----TTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEECCCCHHHHHHHSTTCCCC
T ss_pred -----CCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEcCCcccccccccCCCCce
Confidence 6677777763 32333221 111 1 26999999999999999982 445
Q ss_pred eEEEEEecCC
Q psy17325 391 FIDFCNYDGT 400 (461)
Q Consensus 391 ~I~~~~~~g~ 400 (461)
.+.+++.|.+
T Consensus 417 ~~~~~~vd~~ 426 (462)
T 2ece_A 417 WMVKLNANPS 426 (462)
T ss_dssp EEEEEEECTT
T ss_pred EEEEEEecCC
Confidence 6666666433
No 116
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.92 E-value=9.6e-10 Score=105.77 Aligned_cols=82 Identities=32% Similarity=0.707 Sum_probs=67.6
Q ss_pred CCcccCCCCCCCCCceeCCCCceEeCCCCCeecCCCCcee-cCcceec--CCcccCceeeccCCccccCCCCeeeeCCCC
Q psy17325 30 LAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ-DMNECEQ--PGYCSQMCTNTKGSYICSCNEGYVLEYDNH 106 (461)
Q Consensus 30 ~~~C~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~-d~~eC~~--~~~C~~~C~~~~g~~~C~C~~g~~l~~~~~ 106 (461)
.++|..+++.-...|.+..++|.|.|++||. +..|+ +++||.. ...|.+.|.|..++|.|.|++||.+..+.+
T Consensus 5 ~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~----g~~C~~~~~eC~~~~~~~C~~~C~~~~g~~~C~C~~g~~~~~~~~ 80 (317)
T 3h5c_B 5 GSPCISQPCLHNGSCQDSIWGYTCTCSPGYE----GSNCELAKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHK 80 (317)
T ss_dssp -CCTTSCCCTTTCCCCCCSSSCCCCCSSSCC----SSSSCCCSSSCCTTCTTSCSSEEECCSSSCEEECCTTEECCTTSS
T ss_pred CCcCCCCCCCCCCEeECCCCCeEEECCCCCc----CCccccCcccCCCCCCCCCcCccccCCCeeEEecccccccccccc
Confidence 4566655533334688889999999999995 77998 9999985 368999999999999999999999988889
Q ss_pred ceeeccccc
Q psy17325 107 TCKAINHSA 115 (461)
Q Consensus 107 ~C~~~~~~~ 115 (461)
.|.+.+++.
T Consensus 81 ~C~~~~~c~ 89 (317)
T 3h5c_B 81 QCVPHDQCA 89 (317)
T ss_dssp CCEECSSCC
T ss_pred ccccccccc
Confidence 998877653
No 117
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.92 E-value=1.1e-09 Score=92.02 Aligned_cols=79 Identities=28% Similarity=0.656 Sum_probs=66.2
Q ss_pred CCCcccCCCCCCCC--CceeCCCCceEeCCCCCeecCCCCceec-Ccce---e-cCCcccCceeeccC-CccccCCCCee
Q psy17325 29 DLAECKHKFGLCSN--TCHPTPLGALCTCPPGEILSNDSVTCQD-MNEC---E-QPGYCSQMCTNTKG-SYICSCNEGYV 100 (461)
Q Consensus 29 ~~~~C~~~~~~C~~--~C~~~~~~~~C~C~~G~~l~~~~~~C~d-~~eC---~-~~~~C~~~C~~~~g-~~~C~C~~g~~ 100 (461)
++++|..++ |.+ .|.+..++|.|.|++||. +..|++ +++| . .++.|.+.|.++.+ +|.|.|++||.
T Consensus 46 did~C~~~p--C~n~g~C~~~~g~y~C~C~~G~~----G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~ 119 (142)
T 2c4f_L 46 DGDQCASSP--CQNGGSCKDQLQSYICFCLPAFE----GRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYS 119 (142)
T ss_dssp TCCGGGGCC--CCTTCEEEEETTEEEEECCTTEE----STTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEE
T ss_pred ccCcCcCCC--cCCCCEEeCCCCCEEeeCCCCcc----CCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCce
Confidence 577887554 654 799999999999999996 678986 5775 2 35678889999999 99999999999
Q ss_pred eeCCCCceeeccc
Q psy17325 101 LEYDNHTCKAINH 113 (461)
Q Consensus 101 l~~~~~~C~~~~~ 113 (461)
+..+++.|.++++
T Consensus 120 l~~dG~~C~~~~e 132 (142)
T 2c4f_L 120 LLADGVSCTPTVE 132 (142)
T ss_dssp ECTTSSCEEESSS
T ss_pred ECCCCCCCCCCCc
Confidence 9999999988765
No 118
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.91 E-value=3.4e-07 Score=92.22 Aligned_cols=267 Identities=13% Similarity=0.030 Sum_probs=145.0
Q ss_pred eEEEcCccceeeeeeeecCC-eEEEEeCCCCeEEEEeCCCCcE-EEE------ecCC-----CCCceeEEEcCC---CCc
Q psy17325 142 DIVVSGLDLVEGLAYDWIGG-HIYWLDSRLNRIEVCDENGTNR-IVL------AKDN-----ITQPRGMMLDPS---PGT 205 (461)
Q Consensus 142 ~~~~~g~~~p~~iavd~~~~-~ly~~d~~~~~I~~~~~~G~~~-~~l------~~~~-----~~~p~~ia~d~~---~g~ 205 (461)
..++.+|..|.+|++.+.+. +||+++. .++|.+++.+|... +.+ +... ..-+.+||++|. ++
T Consensus 7 ~~va~gL~~P~~~a~~pdG~~rl~V~er-~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~- 84 (463)
T 2wg3_C 7 QEVVSGLRQPVGALHSGDGSQRLFILEK-EGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNG- 84 (463)
T ss_dssp EEEEEEESSEEEEECCSSSSCCEEEEET-TTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHC-
T ss_pred EEeccCCCCceEEEECCCCCeEEEEEeC-CceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCC-
Confidence 35677899999999998764 7999987 58999998877531 111 1111 234678999996 57
Q ss_pred eEEEEeecCC-----------CCcEEEEecCCC--------CcEEEEec----ccccceeEEeeccCCeeEEecCCCcee
Q psy17325 206 RWLFWTDWGE-----------NPRIERIGMDGS--------NRSTIIST----KIYWPNGLTLDIATRRVYFADSKLDFI 262 (461)
Q Consensus 206 ~~ly~td~~~-----------~~~I~~~~~dG~--------~~~~i~~~----~~~~P~glavD~~~~~ly~~d~~~~~i 262 (461)
+||++-... ..+|.|..++.. ..++|+.. .......|++++ .++||++-......
T Consensus 85 -~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~~~~ 162 (463)
T 2wg3_C 85 -KLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDGMIT 162 (463)
T ss_dssp -EEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCTTCC
T ss_pred -EEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCCCCC
Confidence 788774211 137888887531 12444431 234566799997 56999986544211
Q ss_pred eecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCc-------------------eEEEEeCCe--eeeEEEe
Q psy17325 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN-------------------ASILVSGQL--YEALALD 321 (461)
Q Consensus 263 ~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~-------------------~~~l~~~~~--p~~iavd 321 (461)
.... .+ -+......++|.|+++||+. +..++..++ |.+|++|
T Consensus 163 ~~~~-~~----------------~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~d 225 (463)
T 2wg3_C 163 LDDM-EE----------------MDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVD 225 (463)
T ss_dssp HHHH-HH----------------CTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEE
T ss_pred CCcc-cc----------------ccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEEC
Confidence 0000 00 00000112589999999951 223444455 9999999
Q ss_pred ccCC------eEEEeecCceeeEEEeecCCCCceEEEeecCCC----eEEEeeCCC--CCceeEEEec------CCCeEE
Q psy17325 322 LENG------MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSN----RSTIISTKI--YWPNGLTLDI------ATRRVY 383 (461)
Q Consensus 322 ~~~~------~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~----~~~l~~~~l--~~p~glaiD~------~~~~ly 383 (461)
|..+ .||.+|.. + ++....+|..+.. |.+ .-++....- ..|.|+++-. ..+.++
T Consensus 226 p~tg~~~G~l~~~~~D~~--G-----~~~~~~ei~~i~~-G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f 297 (463)
T 2wg3_C 226 RHPTDININLTILCSDSN--G-----KNRSSARILQIIK-GKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYV 297 (463)
T ss_dssp SSCSSTTCSEEEEEECC-------------CEEEEEEC-----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEE
T ss_pred CCCCCcccceEEEecccC--C-----CCCCCCeEeeecc-CCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEE
Confidence 9754 45555541 0 0000123444321 221 112221111 4688999821 235689
Q ss_pred EEcCCCCeEEEEEecCCCCe--EEEEEccccceeeccCCCCCcceEEEeee-CCEEEEEeC
Q psy17325 384 FADSKLDFIDFCNYDGTGRQ--QVILIDLMVEFTNDLMGDNGVPALALDLE-NGMLYYSTE 441 (461)
Q Consensus 384 ~~d~~~~~I~~~~~~g~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~lYwtd~ 441 (461)
++|.. ++|.++.++..+.. ...+....... ........+++++.. +|.||+++.
T Consensus 298 ~~~~~-g~i~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~r~~~v~~~pdG~Lyv~~~ 354 (463)
T 2wg3_C 298 FGDRN-GNFLTLQQSPVTKQWQEKPLCLGTSGS---CRGYFSGHILGFGEDELGEVYILSS 354 (463)
T ss_dssp EEETT-SCEEEEEC-----CCEEEEECEEETTS---SCSCCCSEEEEEEECTTCCEEEEEE
T ss_pred EecCC-CcEEEEEeCCCCceeeEEEeecCCccc---ccccccCcceEEEECCCCCEEEEec
Confidence 99987 78999998543321 12221110000 000111236777776 579999997
No 119
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.89 E-value=8.8e-07 Score=91.47 Aligned_cols=201 Identities=11% Similarity=0.076 Sum_probs=130.0
Q ss_pred EcCccceeeeeeeecCCeEEEEeCCCCeEEEEeC--C-CCcEEEEecCCCCCceeEEEcC----CCCceEEEEeecCCCC
Q psy17325 145 VSGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDE--N-GTNRIVLAKDNITQPRGMMLDP----SPGTRWLFWTDWGENP 217 (461)
Q Consensus 145 ~~g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~--~-G~~~~~l~~~~~~~p~~ia~d~----~~g~~~ly~td~~~~~ 217 (461)
..+.. |.++++++.++.||+++.. +.|.+.++ . ++....+. .+ ..|++++++| ..+ +||.+.. ...
T Consensus 176 ~~g~~-~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~t~~~~~~i~-~g-~~p~~va~sp~~~~dg~--~l~v~~~-~~~ 248 (543)
T 1nir_A 176 DTGYA-VHISRMSASGRYLLVIGRD-ARIDMIDLWAKEPTKVAEIK-IG-IEARSVESSKFKGYEDR--YTIAGAY-WPP 248 (543)
T ss_dssp ECSTT-EEEEEECTTSCEEEEEETT-SEEEEEETTSSSCEEEEEEE-CC-SEEEEEEECCSTTCTTT--EEEEEEE-ESS
T ss_pred ecCcc-cceEEECCCCCEEEEECCC-CeEEEEECcCCCCcEEEEEe-cC-CCcceEEeCCCcCCCCC--EEEEEEc-cCC
Confidence 33443 8899999999999999987 99999999 3 33333333 22 4699999999 877 9999873 235
Q ss_pred cEEEEecCCCCcEEEEec-c----------cccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEe
Q psy17325 218 RIERIGMDGSNRSTIIST-K----------IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWID 286 (461)
Q Consensus 218 ~I~~~~~dG~~~~~i~~~-~----------~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d 286 (461)
.|..++.........+.. . -.+|.++++.+.++.+|++....+.
T Consensus 249 ~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~------------------------- 303 (543)
T 1nir_A 249 QFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGK------------------------- 303 (543)
T ss_dssp EEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTE-------------------------
T ss_pred eEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCe-------------------------
Confidence 777776654333222322 1 1156788888888888888776643
Q ss_pred cCCCCcceeeeEEeCCC-CceE--EEEeCCeeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEe
Q psy17325 287 EGGNGVPLKIGKANMDG-SNAS--ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363 (461)
Q Consensus 287 ~~~~~~~~~I~~~~~~g-~~~~--~l~~~~~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~ 363 (461)
|...+... +... .+-....|++++++|.+++||.+... .++|...+.........+
T Consensus 304 ---------i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~------------~~~v~v~D~~tg~l~~~i 362 (543)
T 1nir_A 304 ---------VLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANN------------SNKVAVIDSKDRRLSALV 362 (543)
T ss_dssp ---------EEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGG------------GTEEEEEETTTTEEEEEE
T ss_pred ---------EEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecC------------CCeEEEEECCCCeEEEee
Confidence 45555432 2222 22222239999999999999988766 556666665433222222
Q ss_pred e-CCCCCc-eeEEE-ecCCCeEEEEcC-CCCeEEEEEec
Q psy17325 364 S-TKIYWP-NGLTL-DIATRRVYFADS-KLDFIDFCNYD 398 (461)
Q Consensus 364 ~-~~l~~p-~glai-D~~~~~ly~~d~-~~~~I~~~~~~ 398 (461)
. ....+| .|..+ ++..+++|++.. +.++|..++++
T Consensus 363 ~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~ 401 (543)
T 1nir_A 363 DVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTD 401 (543)
T ss_dssp ECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECC
T ss_pred ccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeC
Confidence 2 222233 35554 556689998865 56899999995
No 120
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.89 E-value=3.7e-07 Score=89.23 Aligned_cols=250 Identities=7% Similarity=-0.071 Sum_probs=143.2
Q ss_pred cCCeEEEEeCCCC----eEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecC--------CCCcEEEEecCC
Q psy17325 159 IGGHIYWLDSRLN----RIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG--------ENPRIERIGMDG 226 (461)
Q Consensus 159 ~~~~ly~~d~~~~----~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~--------~~~~I~~~~~dG 226 (461)
....+|+++...+ +|.++|++......-+..+ ..| ++++.|..+ +||+++.. ....|..+++..
T Consensus 30 ~~~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG-~~P-~i~~spDg~--~lyVan~~~~r~~~G~~~~~VsviD~~T 105 (368)
T 1mda_H 30 ISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGA-FLS-LAVAGHSGS--DFALASTSFARSAKGKRTDYVEVFDPVT 105 (368)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC-TTC-EEEECTTSS--CEEEEEEEETTTTSSSEEEEEEEECTTT
T ss_pred CCCeEEEECCccCCccceEEEEECCCCeEEEEEeCC-CCC-ceEECCCCC--EEEEEcccccccccCCCCCEEEEEECCC
Confidence 3578999999877 8889998765543333333 358 999999988 99999731 135788888875
Q ss_pred CCc-EEEEec------ccccceeEEeeccCCeeEEecCC-Cceeee--cccceeeeeccc------eeeeEEEEEecCCC
Q psy17325 227 SNR-STIIST------KIYWPNGLTLDIATRRVYFADSK-LDFIDC--KSLEIKTNVNYS------TIFRKLYWIDEGGN 290 (461)
Q Consensus 227 ~~~-~~i~~~------~~~~P~glavD~~~~~ly~~d~~-~~~i~~--~~~~~~~~v~~~------~~~~~~yw~d~~~~ 290 (461)
... ..|... ....|.+|++++.+++||+++.. .+.+.. ++....+.|... .-.+..|.+....
T Consensus 106 ~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~d- 184 (368)
T 1mda_H 106 FLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCP- 184 (368)
T ss_dssp CCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCT-
T ss_pred CCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCC-
Confidence 443 333221 02469999999999999999865 455555 555433333221 1122344443333
Q ss_pred CcceeeeEEeCCC----CceEEEE------eCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCe
Q psy17325 291 GVPLKIGKANMDG----SNASILV------SGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNR 359 (461)
Q Consensus 291 ~~~~~I~~~~~~g----~~~~~l~------~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~ 359 (461)
+++...+++. .. +++. .-+. |. + .+..+.+||+.. +.+..++..+...
T Consensus 185 ---g~~~~vd~~~~~~~~~-~v~~~~t~~i~vg~~P~--~-~~~~~~~~~vs~--------------~~V~viD~~~~~~ 243 (368)
T 1mda_H 185 ---ASLAASDLAAAPAAAG-IVGAQCTGAQNCSSQAA--Q-ANYPGMLVWAVA--------------SSILQGDIPAAGA 243 (368)
T ss_dssp ---TSCEEEECCSSCCCCE-ECCCCSCTTSCBCSCCE--E-ETTTTEEEECBS--------------SCCEEEECCSSCC
T ss_pred ---CCEEEEECccccccCC-eEEEEeeeeeeCCCCcc--c-cccCCEEEEEcC--------------CEEEEEECCCCcc
Confidence 2344444443 11 1110 0011 55 3 555666665432 3555555544333
Q ss_pred EEEeeC---------CCCCcee---EEEecCCCeEEEEcC---C-----CCeEEEEEecCCCCeEEEEEccccceeeccC
Q psy17325 360 STIIST---------KIYWPNG---LTLDIATRRVYFADS---K-----LDFIDFCNYDGTGRQQVILIDLMVEFTNDLM 419 (461)
Q Consensus 360 ~~l~~~---------~l~~p~g---laiD~~~~~ly~~d~---~-----~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~ 419 (461)
+++..- ....|.| +++++++++||++.. + .+.+..+|+. ++.....+.. +..
T Consensus 244 ~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~-t~~vv~~i~v---g~~---- 315 (368)
T 1mda_H 244 TMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTAS-VGQTSGPISN---GHD---- 315 (368)
T ss_dssp EEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESS-SCCEEECCEE---EEE----
T ss_pred eEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECC-CCeEEEEEEC---CCC----
Confidence 332211 1224666 899999999999854 3 2456688883 3433222211 111
Q ss_pred CCCCcceEEEeeeCCEEEEEeC-CCcee
Q psy17325 420 GDNGVPALALDLENGMLYYSTE-GAEFL 446 (461)
Q Consensus 420 ~~~~~~~~~l~~~~~~lYwtd~-~~~~i 446 (461)
+..++++.++.++|++.. .++.|
T Consensus 316 ----p~gi~~s~Dg~~l~va~~~~~~~V 339 (368)
T 1mda_H 316 ----SDAIIAAQDGASDNYANSAGTEVL 339 (368)
T ss_dssp ----ECEEEECCSSSCEEEEEETTTTEE
T ss_pred ----cceEEECCCCCEEEEEccCCCCeE
Confidence 224556666677999988 57665
No 121
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.85 E-value=8.1e-08 Score=93.89 Aligned_cols=235 Identities=11% Similarity=0.042 Sum_probs=134.2
Q ss_pred EEcCccceeeeeeeecCCeEEEEeC---------CCCeEEEEeCCCCc-EEEEecC-C-----CCCceeEEEcCCCCceE
Q psy17325 144 VVSGLDLVEGLAYDWIGGHIYWLDS---------RLNRIEVCDENGTN-RIVLAKD-N-----ITQPRGMMLDPSPGTRW 207 (461)
Q Consensus 144 ~~~g~~~p~~iavd~~~~~ly~~d~---------~~~~I~~~~~~G~~-~~~l~~~-~-----~~~p~~ia~d~~~g~~~ 207 (461)
+..|. .| ++++++.++.+|+++. ..+.|.++|+.... ...+... . ...|++++++|..+ +
T Consensus 62 i~vG~-~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk--~ 137 (368)
T 1mda_H 62 SLGAF-LS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSA--C 137 (368)
T ss_dssp EEECT-TC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSS--C
T ss_pred EeCCC-CC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCC--E
Confidence 34454 47 9999999999999984 46889999976544 3333222 1 24699999999977 9
Q ss_pred EEEeecCCCCcEEE--EecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccce----eeeec-------
Q psy17325 208 LFWTDWGENPRIER--IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEI----KTNVN------- 274 (461)
Q Consensus 208 ly~td~~~~~~I~~--~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~----~~~v~------- 274 (461)
||++++.....+.. +++.. ...+- .|.++.+.+..+++|++....+.+..++.+. ...+.
T Consensus 138 lyVan~~~~~~v~V~~iD~~t--v~~i~-----v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i 210 (368)
T 1mda_H 138 LLFFLFGSSAAAGLSVPGASD--DQLTK-----SASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQ 210 (368)
T ss_dssp EEEEECSSSCEEEEEETTTEE--EEEEE-----CSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTS
T ss_pred EEEEccCCCCeEEEEEEchhh--ceEEE-----CCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeee
Confidence 99998543445666 44443 22221 1222333444555555544443333333221 00000
Q ss_pred -c------ceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEe----------CCe-eee---EEEeccCCeEEEeecC
Q psy17325 275 -Y------STIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS----------GQL-YEA---LALDLENGMLYYSTLK 333 (461)
Q Consensus 275 -~------~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~----------~~~-p~~---iavd~~~~~lY~t~~~ 333 (461)
. ..-.+.+||+.. . .+.+++..+...+++.. ... |.+ +++++.+++||++...
T Consensus 211 ~vg~~P~~~~~~~~~~~vs~-~-----~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~ 284 (368)
T 1mda_H 211 NCSSQAAQANYPGMLVWAVA-S-----SILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVE 284 (368)
T ss_dssp CBCSCCEEETTTTEEEECBS-S-----CCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEE
T ss_pred eCCCCccccccCCEEEEEcC-C-----EEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEecc
Confidence 0 001235677665 2 47778876654444331 112 666 9999999999987431
Q ss_pred c-eeeEEEeecCCCCceEEEeecCCCeEEEeeC-CCCCceeEEEecCCCeEEEEcC-CCCeEEEEEecCCCCe
Q psy17325 334 C-TRWLFWTDWGENPRIERIGMDGSNRSTIIST-KIYWPNGLTLDIATRRVYFADS-KLDFIDFCNYDGTGRQ 403 (461)
Q Consensus 334 ~-~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~-~l~~p~glaiD~~~~~ly~~d~-~~~~I~~~~~~g~g~~ 403 (461)
. ...|+ ....+.. +|-...+++..- --..|.||++++++++||++.. ..+.|..+|+. ++..
T Consensus 285 ~~~~~~~-----~~~~~~V--iD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~-t~kv 349 (368)
T 1mda_H 285 HSRSCLA-----AAENTSS--VTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAA-SDQD 349 (368)
T ss_dssp CSSCTTS-----CEEEEEE--EESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESS-SCEE
T ss_pred ccCcccc-----cCCCEEE--EECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECC-CCcE
Confidence 0 00000 0011222 333333333211 1126999999988888999988 69999999993 4443
No 122
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.84 E-value=3e-06 Score=79.50 Aligned_cols=219 Identities=13% Similarity=0.020 Sum_probs=140.3
Q ss_pred CeEEEEeCCCCeEEEEeC-CCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEeccccc
Q psy17325 161 GHIYWLDSRLNRIEVCDE-NGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYW 239 (461)
Q Consensus 161 ~~ly~~d~~~~~I~~~~~-~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~~~~~ 239 (461)
+++++++..+++|.+.+. +|+..-.+-......+..+++.|.. .++++. ...|...+.+|...-.+-...-..
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG---~ilvs~---~~~V~~~d~~G~~~W~~~~~~~~~ 78 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAG---EILFSY---SKGAKMITRDGRELWNIAAPAGCE 78 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTS---CEEEEC---BSEEEEECTTSCEEEEEECCTTCE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCC---CEEEeC---CCCEEEECCCCCEEEEEcCCCCcc
Confidence 577888888889999998 7776655544332468899999864 466543 357888888776443332211123
Q ss_pred ceeEEeeccCCeeEEecCC-CceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEE-eCC----
Q psy17325 240 PNGLTLDIATRRVYFADSK-LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV-SGQ---- 313 (461)
Q Consensus 240 P~glavD~~~~~ly~~d~~-~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~-~~~---- 313 (461)
+.+.++.+ ++++++++.. . .+|...+.+|+....+. ...
T Consensus 79 ~~~~~~~~-dG~~lv~~~~~~----------------------------------~~v~~vd~~Gk~l~~~~~~~~~~~~ 123 (276)
T 3no2_A 79 MQTARILP-DGNALVAWCGHP----------------------------------STILEVNMKGEVLSKTEFETGIERP 123 (276)
T ss_dssp EEEEEECT-TSCEEEEEESTT----------------------------------EEEEEECTTSCEEEEEEECCSCSSG
T ss_pred ccccEECC-CCCEEEEecCCC----------------------------------CEEEEEeCCCCEEEEEeccCCCCcc
Confidence 44566654 5667777655 4 34556666776543332 111
Q ss_pred e--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCe
Q psy17325 314 L--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391 (461)
Q Consensus 314 ~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~ 391 (461)
. |+++++++ +|.+++++.. +++|...+.+|+..-.+-. -..|.++++. .++++++++...++
T Consensus 124 ~~~~~~v~~~~-~G~~lv~~~~------------~~~v~~~d~~G~~~w~~~~--~~~~~~~~~~-~~g~~~v~~~~~~~ 187 (276)
T 3no2_A 124 HAQFRQINKNK-KGNYLVPLFA------------TSEVREIAPNGQLLNSVKL--SGTPFSSAFL-DNGDCLVACGDAHC 187 (276)
T ss_dssp GGSCSCCEECT-TSCEEEEETT------------TTEEEEECTTSCEEEEEEC--SSCCCEEEEC-TTSCEEEECBTTSE
T ss_pred cccccCceECC-CCCEEEEecC------------CCEEEEECCCCCEEEEEEC--CCCccceeEc-CCCCEEEEeCCCCe
Confidence 1 77888886 5556667666 7889999988776555442 2578898886 67889999988889
Q ss_pred EEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEee-eCCEEEEEeCCC
Q psy17325 392 IDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDL-ENGMLYYSTEGA 443 (461)
Q Consensus 392 I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~lYwtd~~~ 443 (461)
|..++.+ +|...-.+...... +..+..|.++.+ .+|.+|+++...
T Consensus 188 v~~~d~~-tG~~~w~~~~~~~~------~~~l~~~~~~~~~~~G~i~v~~~~g 233 (276)
T 3no2_A 188 FVQLNLE-SNRIVRRVNANDIE------GVQLFFVAQLFPLQNGGLYICNWQG 233 (276)
T ss_dssp EEEECTT-TCCEEEEEEGGGSB------SCCCSEEEEEEECTTSCEEEEEECT
T ss_pred EEEEeCc-CCcEEEEecCCCCC------CccccccccceEcCCCCEEEEeccC
Confidence 9999993 47775544432111 001123455554 478999999643
No 123
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.84 E-value=8.6e-07 Score=84.38 Aligned_cols=187 Identities=10% Similarity=0.043 Sum_probs=106.8
Q ss_pred eEEEEeCCCCeEEEEeCCCCcEEEEec-CCCC-CceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEec-c--
Q psy17325 162 HIYWLDSRLNRIEVCDENGTNRIVLAK-DNIT-QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST-K-- 236 (461)
Q Consensus 162 ~ly~~d~~~~~I~~~~~~G~~~~~l~~-~~~~-~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~-~-- 236 (461)
.++++....+.|.+.++........+. .... .|.+++++|..+ +||++. .....|...++........+.. .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~--~l~v~~-~~~~~v~~~d~~~~~~~~~~~~~~~~ 78 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGR--IAYATV-NKSESLVKIDLVTGETLGRIDLSTPE 78 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSS--EEEEEE-TTTTEEEEEETTTCCEEEEEECCBTT
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCC--EEEEEe-CCCCeEEEEECCCCCeEeeEEcCCcc
Confidence 355666667777777765443332222 2211 599999999877 899998 5557899999875443322221 1
Q ss_pred --cccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCe
Q psy17325 237 --IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314 (461)
Q Consensus 237 --~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~ 314 (461)
-..|.++++++.+++||+++....... .-|+. .. +.|.+.++.+......+....
T Consensus 79 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~-----------------~~~~~--~~----~~i~v~d~~~~~~~~~~~~~~ 135 (337)
T 1pby_B 79 ERVKSLFGAALSPDGKTLAIYESPVRLEL-----------------THFEV--QP----TRVALYDAETLSRRKAFEAPR 135 (337)
T ss_dssp EEEECTTCEEECTTSSEEEEEEEEEEECS-----------------SCEEE--CC----CEEEEEETTTTEEEEEEECCS
T ss_pred cccccccceEECCCCCEEEEEeccccccc-----------------ccccc--cC----ceEEEEECCCCcEEEEEeCCC
Confidence 126899999998889999862100000 00000 00 246667766544333333333
Q ss_pred -eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCC
Q psy17325 315 -YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 390 (461)
Q Consensus 315 -p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~ 390 (461)
|.+++++|.++.||+++ +.|...++........+ ..-.++..+++++.+..||++....+
T Consensus 136 ~~~~~~~s~dg~~l~~~~---------------~~i~~~d~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~ 196 (337)
T 1pby_B 136 QITMLAWARDGSKLYGLG---------------RDLHVMDPEAGTLVEDK-PIQSWEAETYAQPDVLAVWNQHESSG 196 (337)
T ss_dssp SCCCEEECTTSSCEEEES---------------SSEEEEETTTTEEEEEE-CSTTTTTTTBCCCBCCCCCCCCTTTT
T ss_pred CcceeEECCCCCEEEEeC---------------CeEEEEECCCCcEeeee-eccccCCCceeCCCccEEeeeccCCC
Confidence 89999999988888873 24555555433322222 11122333455656666776655444
No 124
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.83 E-value=2e-06 Score=83.95 Aligned_cols=98 Identities=13% Similarity=0.112 Sum_probs=64.5
Q ss_pred CCeEEEEeCC-----CCeEEEEeCC-CCcEEEEecCCCCCceeEEEcCCCCceEEEEeec-------CC-CCcEEEEecC
Q psy17325 160 GGHIYWLDSR-----LNRIEVCDEN-GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW-------GE-NPRIERIGMD 225 (461)
Q Consensus 160 ~~~ly~~d~~-----~~~I~~~~~~-G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~-------~~-~~~I~~~~~d 225 (461)
.+.+|++|.. .+.|.+++.. |+....+ ..+ ..| +|+++|..+ +||.++. +. ...|...++.
T Consensus 15 ~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i-~~g-~~p-~i~~spdg~--~lyv~~~~~~~~~~g~~~~~v~v~d~~ 89 (361)
T 2oiz_A 15 ENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMV-PTA-FNG-HVQVSNDGK--KIYTMTTYHERITRGKRSDVVEVWDAD 89 (361)
T ss_dssp GGEEEEEECCGGGGGGCEEEEEETTTCCEEEEE-ECC-EEE-EEEECTTSS--EEEEEEEEETTSSSSCEEEEEEEEETT
T ss_pred CCEEEEECCCCCccccCeEEEEECCCCeEEEEe-cCC-CCC-ceEECCCCC--EEEEEEecccccccCCCCCEEEEEECc
Confidence 5678888864 4588888864 4433333 333 458 999999977 9999873 11 2458888776
Q ss_pred CCCc-EEEEec-----ccccceeEEeeccCCeeEEecCC-Ccee
Q psy17325 226 GSNR-STIIST-----KIYWPNGLTLDIATRRVYFADSK-LDFI 262 (461)
Q Consensus 226 G~~~-~~i~~~-----~~~~P~glavD~~~~~ly~~d~~-~~~i 262 (461)
.... ..+-.. ....|.+|++++.+++||+++.. .+.|
T Consensus 90 t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 90 KLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp TCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred CCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 3322 222211 12479999999999999999864 4443
No 125
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.83 E-value=2.6e-06 Score=83.09 Aligned_cols=235 Identities=11% Similarity=0.029 Sum_probs=131.4
Q ss_pred cceeeeeeeecCCeEEEEeC---------CCCeEEEEeCCC-CcEEEEecC-----CCCCceeEEEcCCCCceEEEEeec
Q psy17325 149 DLVEGLAYDWIGGHIYWLDS---------RLNRIEVCDENG-TNRIVLAKD-----NITQPRGMMLDPSPGTRWLFWTDW 213 (461)
Q Consensus 149 ~~p~~iavd~~~~~ly~~d~---------~~~~I~~~~~~G-~~~~~l~~~-----~~~~p~~ia~d~~~g~~~ly~td~ 213 (461)
..| ++++++.++.+|+++. ..+.|.++++.. +....+... .-..|.+|+++|..+ +||++..
T Consensus 51 ~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~--~l~v~n~ 127 (361)
T 2oiz_A 51 FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGK--FIVLQNA 127 (361)
T ss_dssp EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSS--EEEEEEE
T ss_pred CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCC--EEEEECC
Confidence 357 9999999999999984 245799999764 333333211 124699999999977 9999985
Q ss_pred CCCCcEEEEecCCCCcEEEEe-ccc-------cccee----EEeeccCCeeEEecCCCceeeecccceeeeecc------
Q psy17325 214 GENPRIERIGMDGSNRSTIIS-TKI-------YWPNG----LTLDIATRRVYFADSKLDFIDCKSLEIKTNVNY------ 275 (461)
Q Consensus 214 ~~~~~I~~~~~dG~~~~~i~~-~~~-------~~P~g----lavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~------ 275 (461)
.....|..++++.. +.+.. -.. ..|.+ +++...+..++|.-...+.+... ......++.
T Consensus 128 ~~~~~v~v~d~~~~--~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~-~~~~~~~~~~~~~~~ 204 (361)
T 2oiz_A 128 SPATSIGIVDVAKG--DYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQ-SRSKQMFSVKDDPIF 204 (361)
T ss_dssp SSSEEEEEEETTTT--EEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEE-EECCCCSCTTTSCBC
T ss_pred CCCCeEEEEECCCC--cEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeee-ccccceEcCCCCceE
Confidence 43467888887743 22221 111 12322 55555555555543322221100 000000000
Q ss_pred ---ceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEe----------CCe-eee---EEEeccCCeEEEeecCceeeE
Q psy17325 276 ---STIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS----------GQL-YEA---LALDLENGMLYYSTLKCTRWL 338 (461)
Q Consensus 276 ---~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~----------~~~-p~~---iavd~~~~~lY~t~~~~~~~l 338 (461)
..-.+.++|.... +.|++.++.+....++.. ... |.| +++++.+++||++......
T Consensus 205 ~~~~~~g~~~~~~~~~-----~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~-- 277 (361)
T 2oiz_A 205 IAPALDKDKAHFVSYY-----GNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGK-- 277 (361)
T ss_dssp SCCEECSSEEEEEBTT-----SEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCC--
T ss_pred EEecccCCEEEEEeCC-----CeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCC--
Confidence 0001244554432 357778776554443321 011 444 9999999999987541000
Q ss_pred EEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCC
Q psy17325 339 FWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG 401 (461)
Q Consensus 339 ~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g 401 (461)
.++.......|...++.......-+...- |.+|++++++++||.+.. +.|..+|.. +|
T Consensus 278 ~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~--~~v~v~D~~-t~ 335 (361)
T 2oiz_A 278 EGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG--GNVNVYDIS-QP 335 (361)
T ss_dssp TTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS--SCEEEEECS-SS
T ss_pred cccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC--CeEEEEECC-CC
Confidence 00000012356666654333222222222 999999999999999985 899999983 45
No 126
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.82 E-value=2.2e-09 Score=90.91 Aligned_cols=57 Identities=35% Similarity=0.849 Sum_probs=39.3
Q ss_pred ceEeCCCCCeecCCCCceecCcceec-CCcccC-ceeeccCCccccCCCCeeeeCCCCce
Q psy17325 51 ALCTCPPGEILSNDSVTCQDMNECEQ-PGYCSQ-MCTNTKGSYICSCNEGYVLEYDNHTC 108 (461)
Q Consensus 51 ~~C~C~~G~~l~~~~~~C~d~~eC~~-~~~C~~-~C~~~~g~~~C~C~~g~~l~~~~~~C 108 (461)
|.|.|++||.+ .++..|++++||.. +..|.+ .|+|+.++|.|.|++||.+..++++|
T Consensus 88 ~~C~C~~Gy~~-~~g~~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~~~C 146 (147)
T 2w86_A 88 VDPICGKGYSR-IKGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGRIC 146 (147)
T ss_dssp CCTTTCTTEEE-EETTEEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTTSSCB
T ss_pred CcccCCCcccc-CCCCccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCCCCee
Confidence 45566666654 23667777888863 445764 78888888888888888777777766
No 127
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.81 E-value=4.7e-06 Score=86.26 Aligned_cols=221 Identities=12% Similarity=0.007 Sum_probs=139.3
Q ss_pred eeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecC-CCCcE-EE
Q psy17325 155 AYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD-GSNRS-TI 232 (461)
Q Consensus 155 avd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~d-G~~~~-~i 232 (461)
..|+ .+.+|+++...+.|.++|.+......-+..+ ..|.++++.|..+ +||++. ....|..+++. .+... .-
T Consensus 162 ~~d~-~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr--~lyv~~--~dg~V~viD~~~~t~~~v~~ 235 (567)
T 1qks_A 162 DWDL-ENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGR--YLFVIG--RDGKVNMIDLWMKEPTTVAE 235 (567)
T ss_dssp CCCG-GGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSC--EEEEEE--TTSEEEEEETTSSSCCEEEE
T ss_pred ccCC-CceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCC--EEEEEc--CCCeEEEEECCCCCCcEeEE
Confidence 3554 6789999999999999998765443333323 3689999999977 999987 24589999984 22221 11
Q ss_pred EecccccceeEEee----ccCCeeEEecCCCceeeecccce---eeeeccc-------------e---ee-----eEEEE
Q psy17325 233 ISTKIYWPNGLTLD----IATRRVYFADSKLDFIDCKSLEI---KTNVNYS-------------T---IF-----RKLYW 284 (461)
Q Consensus 233 ~~~~~~~P~glavD----~~~~~ly~~d~~~~~i~~~~~~~---~~~v~~~-------------~---~~-----~~~yw 284 (461)
+.. -..|.+|+++ +.+++||+++...+.+..++... .+.|... . ++ ..++.
T Consensus 236 i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv 314 (567)
T 1qks_A 236 IKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIV 314 (567)
T ss_dssp EEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEE
T ss_pred Eec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEE
Confidence 222 2369999999 68899999998888877765533 2222110 0 10 12222
Q ss_pred EecCCCCcceeeeEEeCCCCceEEE--EeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEE
Q psy17325 285 IDEGGNGVPLKIGKANMDGSNASIL--VSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRST 361 (461)
Q Consensus 285 ~d~~~~~~~~~I~~~~~~g~~~~~l--~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~ 361 (461)
.-... ++|..++........+ +.... |+++.++|.++++|++... +++|...+..-.....
T Consensus 315 ~~~~~----g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~------------sn~V~ViD~~t~kl~~ 378 (567)
T 1qks_A 315 NVKET----GKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANA------------RNKLVVIDTKEGKLVA 378 (567)
T ss_dssp EETTT----TEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGG------------GTEEEEEETTTTEEEE
T ss_pred EecCC----CeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCC------------CCeEEEEECCCCcEEE
Confidence 22222 3566666543321111 11222 8899999999999998876 6677777765333322
Q ss_pred EeeC--CCCCc-eeEEE-ecCCCeEEEEc-CCCCeEEEEEec
Q psy17325 362 IIST--KIYWP-NGLTL-DIATRRVYFAD-SKLDFIDFCNYD 398 (461)
Q Consensus 362 l~~~--~l~~p-~glai-D~~~~~ly~~d-~~~~~I~~~~~~ 398 (461)
.+.. ...+| .|..+ ++..+.+|++. .+.+.|..++.+
T Consensus 379 ~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~ 420 (567)
T 1qks_A 379 IEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTD 420 (567)
T ss_dssp EEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECC
T ss_pred EEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCC
Confidence 3322 33445 47664 65668888764 456899999985
No 128
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.81 E-value=6.7e-07 Score=87.50 Aligned_cols=247 Identities=12% Similarity=0.091 Sum_probs=147.1
Q ss_pred EEcCccceeeeeeeecCCeEEEEeC---------CCCeEEEEeCCCCcE-EEE-ecCC-----CCCceeEEEcCCCCceE
Q psy17325 144 VVSGLDLVEGLAYDWIGGHIYWLDS---------RLNRIEVCDENGTNR-IVL-AKDN-----ITQPRGMMLDPSPGTRW 207 (461)
Q Consensus 144 ~~~g~~~p~~iavd~~~~~ly~~d~---------~~~~I~~~~~~G~~~-~~l-~~~~-----~~~p~~ia~d~~~g~~~ 207 (461)
+..|. .|. +++++.++.+|+++. ..+.|.++|...... ..+ +..+ ...|++++++|..+ +
T Consensus 75 I~vG~-~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk--~ 150 (386)
T 3sjl_D 75 IDGGF-LPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGK--T 150 (386)
T ss_dssp EEECS-SCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSS--E
T ss_pred EECCC-CCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCC--E
Confidence 34454 365 999999999999984 356799999776543 333 2210 23799999999977 9
Q ss_pred EEEeecCCCCcEEEEecCCCCc-EEEEecc--ccccee----EEeeccCCeeEEecCCCceeeecccceeeeecc--cee
Q psy17325 208 LFWTDWGENPRIERIGMDGSNR-STIISTK--IYWPNG----LTLDIATRRVYFADSKLDFIDCKSLEIKTNVNY--STI 278 (461)
Q Consensus 208 ly~td~~~~~~I~~~~~dG~~~-~~i~~~~--~~~P~g----lavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~--~~~ 278 (461)
||++.......|..+++..... .+|-..+ ...|.| +++-..+..+|++-...+.+... ....++. ..+
T Consensus 151 lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~---~~~~~~~~~~~~ 227 (386)
T 3sjl_D 151 LLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEIT---HTEVFHPEDEFL 227 (386)
T ss_dssp EEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEE---ECCCCSCTTSCB
T ss_pred EEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEe---ecceeccccccc
Confidence 9999843346888888875432 2221111 124555 36666555555554333443110 0001111 111
Q ss_pred ---------eeEEEEEecCCCCcceeeeEEeCCCCceEEEEe----------CCe-eee---EEEeccCCeEEEeecCce
Q psy17325 279 ---------FRKLYWIDEGGNGVPLKIGKANMDGSNASILVS----------GQL-YEA---LALDLENGMLYYSTLKCT 335 (461)
Q Consensus 279 ---------~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~----------~~~-p~~---iavd~~~~~lY~t~~~~~ 335 (461)
..++||...+ ++|+++++.+...+++.. .+. |.+ +++++.+++||++... .
T Consensus 228 ~~~~~~~~~dG~~~~vs~~-----g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~-~ 301 (386)
T 3sjl_D 228 INHPAYSQKAGRLVWPTYT-----GKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQ-R 301 (386)
T ss_dssp CSCCEEETTTTEEEEEBTT-----SEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEE-C
T ss_pred cccceeEcCCCcEEEEeCC-----CEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEecc-c
Confidence 2256665543 369999998876554321 122 544 8999999999998542 0
Q ss_pred eeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCC-eEEEEcCCCCeEEEEEecCCCCeEEEE
Q psy17325 336 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR-RVYFADSKLDFIDFCNYDGTGRQQVIL 407 (461)
Q Consensus 336 ~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~-~ly~~d~~~~~I~~~~~~g~g~~~~~~ 407 (461)
-.|++....++|..+++.-..+..-+ .--..|.+|+++++++ +||.++...+.|..+|.. ++.....+
T Consensus 302 --~~~~hk~~~~~V~viD~~t~kv~~~i-~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~-t~k~~~~i 370 (386)
T 3sjl_D 302 --DEWRHKTASRFVVVLDAKTGERLAKF-EMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAE-SGEELRSV 370 (386)
T ss_dssp --CTTCTTSCEEEEEEEETTTCCEEEEE-EEEEEECEEEECSSSSCEEEEEETTTTEEEEEETT-TCCEEEEE
T ss_pred --cccccCCCCCEEEEEECCCCeEEEEE-ECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECC-CCcEEEEe
Confidence 01222222345766666433322211 1113688999998876 799999999999999993 66654444
No 129
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.74 E-value=9.3e-09 Score=105.93 Aligned_cols=97 Identities=30% Similarity=0.651 Sum_probs=76.3
Q ss_pred CCCCCCC-CCCCC-CCCcccCCCCCCCC-----CceeCCCCceEe-CCCCCeecC-----------CCCceecCcceec-
Q psy17325 17 DCPNGAD-EGPGC-DLAECKHKFGLCSN-----TCHPTPLGALCT-CPPGEILSN-----------DSVTCQDMNECEQ- 76 (461)
Q Consensus 17 dC~dg~d-e~~~C-~~~~C~~~~~~C~~-----~C~~~~~~~~C~-C~~G~~l~~-----------~~~~C~d~~eC~~- 76 (461)
.|+.|+- .+..| +++||...+..|.+ .|.++.++|.|. |++||.... ++..|++++||..
T Consensus 29 ~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~ 108 (634)
T 1yo8_A 29 FCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDK 108 (634)
T ss_dssp CCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTT
T ss_pred cCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCccccccccccccCCCcccccccccCC
Confidence 4777763 23678 58999888877865 799999999998 999997532 4567999999974
Q ss_pred CCccc--Cceeecc----CCccccCCCCeeeeCCCCcee---eccccc
Q psy17325 77 PGYCS--QMCTNTK----GSYICSCNEGYVLEYDNHTCK---AINHSA 115 (461)
Q Consensus 77 ~~~C~--~~C~~~~----g~~~C~C~~g~~l~~~~~~C~---~~~~~~ 115 (461)
...|. ..|.++. ++|.|.|++||.. +++.|. ++++|.
T Consensus 109 ~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~G--dG~~Ce~d~DiDeC~ 154 (634)
T 1yo8_A 109 THNCHKHAECIYLGHFSDPMYKCECQTGYAG--DGLICGEDSDLDGWP 154 (634)
T ss_dssp CCCCCTTEEEEECCTTCSSSEEEEECTTEEE--SSSSEEECTTSSSSC
T ss_pred CcccccCccccccccccccceeeeccCCccc--cCcccccccCccccc
Confidence 45796 4899998 9999999999973 567886 566654
No 130
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.74 E-value=8.8e-09 Score=83.57 Aligned_cols=79 Identities=24% Similarity=0.629 Sum_probs=61.8
Q ss_pred CCCcccCCCCCCCCCceeC-CCCceEeCCCCCeecCCCCceecCccee---cCCcccCceeeccCCccccCCCCeeeeCC
Q psy17325 29 DLAECKHKFGLCSNTCHPT-PLGALCTCPPGEILSNDSVTCQDMNECE---QPGYCSQMCTNTKGSYICSCNEGYVLEYD 104 (461)
Q Consensus 29 ~~~~C~~~~~~C~~~C~~~-~~~~~C~C~~G~~l~~~~~~C~d~~eC~---~~~~C~~~C~~~~g~~~C~C~~g~~l~~~ 104 (461)
++++|.. .+|.+.|+++ +++|.|.|++||.+... ++++|. ..+.|.+.|.+ .++|.|.|++||.+..
T Consensus 3 dideC~~--~pC~~~C~~~~~g~y~C~C~~Gy~g~~~-----~~~~C~~~C~~~~C~~~C~~-~~~y~C~C~~Gy~~~~- 73 (118)
T 1dx5_I 3 PVDPCFR--ANCEYQCQPLDQTSYLCVCAEGFAPIPH-----EPHRCQMFCNQTACPADCDP-NTQASCECPEGYILDD- 73 (118)
T ss_dssp CCCGGGG--CCCSSEEEECSSSCEEEECCTTEEEETT-----EEEEEEECCCSSEEECEECT-TSTTCEECCTTEEEET-
T ss_pred ccccCCC--CCCCCCCCCCCCCCEEeECCCCccccCC-----CCCccccccCCCCCCCcccC-CCCeEeECCCCccCCC-
Confidence 4678863 4687899999 89999999999986432 334443 25678888988 5899999999999876
Q ss_pred CCceeeccccce
Q psy17325 105 NHTCKAINHSAA 116 (461)
Q Consensus 105 ~~~C~~~~~~~~ 116 (461)
++.|.+++++..
T Consensus 74 g~~C~dideC~~ 85 (118)
T 1dx5_I 74 GFICTDIDECEN 85 (118)
T ss_dssp TTEEEECCHHHH
T ss_pred CCccccccccCC
Confidence 789998888753
No 131
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.73 E-value=1.3e-05 Score=76.44 Aligned_cols=224 Identities=10% Similarity=0.019 Sum_probs=127.5
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEec-CC-----CCCceeEEEcCCCCceEEEEeecC---------
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK-DN-----ITQPRGMMLDPSPGTRWLFWTDWG--------- 214 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~-~~-----~~~p~~ia~d~~~g~~~ly~td~~--------- 214 (461)
.|.++++++.++.+|++....+.|.+.+++.......+. .. ...|.+++++|... +||++...
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~--~l~~~~~~~~~~~~~~~ 121 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGK--EVYATVNPTQRLNDHYV 121 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSS--EEEEEEEEEEECSSCEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCC--EEEEEcccccccccccc
Confidence 588899998888899999989999999987654433332 21 12389999999877 89988722
Q ss_pred -CCCcEEEEecCCCC---cEEEEecccccceeEEeeccCCeeEEecCCCceeeecccce---eeeeccce----------
Q psy17325 215 -ENPRIERIGMDGSN---RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEI---KTNVNYST---------- 277 (461)
Q Consensus 215 -~~~~I~~~~~dG~~---~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~---~~~v~~~~---------- 277 (461)
....|...++.... ...... ....+.++++++.++ ||+++.. |...+... ...+....
T Consensus 122 ~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~~---i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 196 (349)
T 1jmx_B 122 VKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAGPD---IYKMDVKTGKYTVALPLRNWNRKGYSAPD 196 (349)
T ss_dssp ECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEESSS---EEEECTTTCCEEEEECSTTCCCTTBCCCB
T ss_pred cCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEccCc---EEEEeCCCCceeccccccccCCccccCcc
Confidence 03588888876421 111222 223578888998666 8886433 44443321 11111110
Q ss_pred ------------eeeE---EEEEecCCC-----CcceeeeEEeCCCCceEEEEe--CC-eeeeEEEec-cCCeEEEeecC
Q psy17325 278 ------------IFRK---LYWIDEGGN-----GVPLKIGKANMDGSNASILVS--GQ-LYEALALDL-ENGMLYYSTLK 333 (461)
Q Consensus 278 ------------~~~~---~yw~d~~~~-----~~~~~I~~~~~~g~~~~~l~~--~~-~p~~iavd~-~~~~lY~t~~~ 333 (461)
.+.. +-++..+.. .....+...+......+.+-. .. .|.+++++| .++.||++ .
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-~- 274 (349)
T 1jmx_B 197 VLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-L- 274 (349)
T ss_dssp CCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-E-
T ss_pred ceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-c-
Confidence 0000 111100000 000001112222222222111 11 288899999 88888876 2
Q ss_pred ceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEe
Q psy17325 334 CTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397 (461)
Q Consensus 334 ~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~ 397 (461)
++|...++........+ ..-..|.++++++.+++||++. ..+.|..+++
T Consensus 275 -------------~~v~~~d~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~-~~~~v~v~d~ 323 (349)
T 1jmx_B 275 -------------NRLAKYDLKQRKLIKAA-NLDHTYYCVAFDKKGDKLYLGG-TFNDLAVFNP 323 (349)
T ss_dssp -------------SEEEEEETTTTEEEEEE-ECSSCCCEEEECSSSSCEEEES-BSSEEEEEET
T ss_pred -------------CeEEEEECccCeEEEEE-cCCCCccceEECCCCCEEEEec-CCCeEEEEec
Confidence 25666666543333333 2234689999998888999974 4589999998
No 132
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.73 E-value=2.5e-06 Score=78.43 Aligned_cols=193 Identities=12% Similarity=0.090 Sum_probs=110.9
Q ss_pred ceeEEEcCCCCceEEEEeecCCCCcEEEEecC-CCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeee
Q psy17325 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMD-GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTN 272 (461)
Q Consensus 194 p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~d-G~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~ 272 (461)
-.||.++. + .||.+. +...+|.++++. |+....+ ...-....||+++ +++||.+....+
T Consensus 57 tqGL~~~~--~--~Ly~st-G~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~--g~~Ly~ltw~~~------------ 116 (268)
T 3nok_A 57 TQGLVFHQ--G--HFFEST-GHQGTLRQLSLESAQPVWME-RLGNIFAEGLASD--GERLYQLTWTEG------------ 116 (268)
T ss_dssp EEEEEEET--T--EEEEEE-TTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEEC--SSCEEEEESSSC------------
T ss_pred cceEEEEC--C--EEEEEc-CCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEe--CCEEEEEEccCC------------
Confidence 37999983 5 999999 776779998887 4444445 3322234567776 789999987764
Q ss_pred eccceeeeEEEEEecCCCCcceeeeEEeCCCC-ceEEEEeCCeeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEE
Q psy17325 273 VNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS-NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351 (461)
Q Consensus 273 v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~-~~~~l~~~~~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~ 351 (461)
.+.+.+++.. ....+-.. +.|.++.+.++.||.|+ + .+.+++.|-.....+.+
T Consensus 117 ----------------------~v~V~D~~Tl~~~~ti~~~--~eGwGLt~Dg~~L~vSd-G-s~~l~~iDp~T~~v~~~ 170 (268)
T 3nok_A 117 ----------------------LLFTWSGMPPQRERTTRYS--GEGWGLCYWNGKLVRSD-G-GTMLTFHEPDGFALVGA 170 (268)
T ss_dssp ----------------------EEEEEETTTTEEEEEEECS--SCCCCEEEETTEEEEEC-S-SSEEEEECTTTCCEEEE
T ss_pred ----------------------EEEEEECCcCcEEEEEeCC--CceeEEecCCCEEEEEC-C-CCEEEEEcCCCCeEEEE
Confidence 4555554422 22222222 44444445588999998 3 23444444332222222
Q ss_pred EeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccc-cceee-ccC-CCCCcceEE
Q psy17325 352 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLM-VEFTN-DLM-GDNGVPALA 428 (461)
Q Consensus 352 ~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~-~~~~~-~~~-~~~~~~~~~ 428 (461)
...... ...+..++.|.. .+++||...+..+.|.++|. .+|.....+.-.. ..... ... ....+-++|
T Consensus 171 I~V~~~------g~~v~~lNeLe~--~dG~lyanvw~s~~I~vIDp-~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA 241 (268)
T 3nok_A 171 VQVKLR------GQPVELINELEC--ANGVIYANIWHSSDVLEIDP-ATGTVVGVIDASALTRAVAGQVTNPEAVLNGIA 241 (268)
T ss_dssp EECEET------TEECCCEEEEEE--ETTEEEEEETTCSEEEEECT-TTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEE
T ss_pred EEeCCC------CcccccccccEE--eCCEEEEEECCCCeEEEEeC-CCCcEEEEEECCCCcccccccccCcCCceEEEE
Confidence 211110 012446677777 58899999999999999999 4777655543321 00000 000 001122444
Q ss_pred EeeeCCEEEEEeC
Q psy17325 429 LDLENGMLYYSTE 441 (461)
Q Consensus 429 l~~~~~~lYwtd~ 441 (461)
++..+++||+|.-
T Consensus 242 ~dp~~~rlfVTGK 254 (268)
T 3nok_A 242 VEPGSGRIFMTGK 254 (268)
T ss_dssp ECTTTCCEEEEET
T ss_pred EcCCCCEEEEeCC
Confidence 4445789999863
No 133
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.73 E-value=1.1e-06 Score=89.70 Aligned_cols=259 Identities=10% Similarity=0.009 Sum_probs=154.8
Q ss_pred cCCeEEEEeCCCCeEEEEeCCCCcEEEEec-CCCCCceeEEEc--CCCCceEEEEeecC----------------CCCcE
Q psy17325 159 IGGHIYWLDSRLNRIEVCDENGTNRIVLAK-DNITQPRGMMLD--PSPGTRWLFWTDWG----------------ENPRI 219 (461)
Q Consensus 159 ~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~-~~~~~p~~ia~d--~~~g~~~ly~td~~----------------~~~~I 219 (461)
.++.+|++|..+++|.|++++......++. ..-..|.|+++. |..+ ++|.+... ....+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~--~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSN--YVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCS--EEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCc--EEEEecccccccCCCCcccccccccCceE
Confidence 478999999999999999999877555443 223569999984 8878 99999410 11355
Q ss_pred EEEecCCCCcEEEEeccc-ccceeEEeeccCCeeEEecCCCceeeec---ccceeeeeccc---------eeeeEEEEEe
Q psy17325 220 ERIGMDGSNRSTIISTKI-YWPNGLTLDIATRRVYFADSKLDFIDCK---SLEIKTNVNYS---------TIFRKLYWID 286 (461)
Q Consensus 220 ~~~~~dG~~~~~i~~~~~-~~P~glavD~~~~~ly~~d~~~~~i~~~---~~~~~~~v~~~---------~~~~~~yw~d 286 (461)
..++.+. .+++..-.+ ..|.++++++.++++|++...++..... +...+..|... ...+..|.
T Consensus 178 tvID~~t--~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i-- 253 (595)
T 1fwx_A 178 TAVDADK--WEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL-- 253 (595)
T ss_dssp EEEETTT--TEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE--
T ss_pred EEEECCC--CeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE--
Confidence 5666553 222222111 3799999999999999999776432211 11111111110 00112221
Q ss_pred cCCCCcceeeeEEeCCC---Cc-eEEEEeCCeeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCC----
Q psy17325 287 EGGNGVPLKIGKANMDG---SN-ASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSN---- 358 (461)
Q Consensus 287 ~~~~~~~~~I~~~~~~g---~~-~~~l~~~~~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~---- 358 (461)
+.|.+.+... +. ...+-....|+|+++.|.++++|+++.. .++|...+.+-..
T Consensus 254 -------~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~------------s~~VsVid~~~~~~~~~ 314 (595)
T 1fwx_A 254 -------NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKL------------SPTVTVLDVTRFDAVFY 314 (595)
T ss_dssp -------TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTT------------SSBEEEEEGGGHHHHHH
T ss_pred -------CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCC------------CCeEEEEECcccccccc
Confidence 2366666553 22 2223222229999999999999999888 6677776665211
Q ss_pred ------eEEEee-CCCCCceeEEEecCCCeEEEEcCCCCeEEEEEecC-----CCCe-EEEEEcccccee-eccCCCCCc
Q psy17325 359 ------RSTIIS-TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDG-----TGRQ-QVILIDLMVEFT-NDLMGDNGV 424 (461)
Q Consensus 359 ------~~~l~~-~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g-----~g~~-~~~~~~~~~~~~-~~~~~~~~~ 424 (461)
..++.. .--..|.++++|+.+ ++|.+..-.+.|..++++. .|.. ..++.....+.. -... ..
T Consensus 315 ~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~---~~ 390 (595)
T 1fwx_A 315 ENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLK---TV 390 (595)
T ss_dssp SCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEE---ET
T ss_pred cccCcccceEEEcCCCCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccce---ec
Confidence 112221 223469999999766 9999999999999999842 0001 112211111110 0000 00
Q ss_pred ceEEEeeeCCEEEEEeCCC-cee
Q psy17325 425 PALALDLENGMLYYSTEGA-EFL 446 (461)
Q Consensus 425 ~~~~l~~~~~~lYwtd~~~-~~i 446 (461)
.+..++.++.+||.++..+ .++
T Consensus 391 ~g~t~~~DGk~l~~~Nk~skdr~ 413 (595)
T 1fwx_A 391 MGETLDATNDWLVCLSKFSKDRF 413 (595)
T ss_dssp TTTSTTCCSSEEEEEESCCTTSS
T ss_pred cceEeCCCCCEEEEcCCCCcccc
Confidence 1234567889999999888 544
No 134
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.72 E-value=4.5e-09 Score=72.52 Aligned_cols=45 Identities=22% Similarity=0.565 Sum_probs=40.1
Q ss_pred CcccCCCCCCCCCceeCCCCceEeCCCCCeecCCCCceecCccee
Q psy17325 31 AECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECE 75 (461)
Q Consensus 31 ~~C~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~d~~eC~ 75 (461)
+||...+..|.+.|.+++++|.|.|++||.|..++++|.+++||.
T Consensus 2 dEC~~~~~~C~~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~ 46 (55)
T 2jkh_L 2 KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYP 46 (55)
T ss_dssp CCTTTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEESSSSC
T ss_pred ccccCCCCCcCcEeEcCCCCeEEeCCCCCEECCCCCeeccCcccc
Confidence 578777788999999999999999999999988999999999883
No 135
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.71 E-value=6.7e-09 Score=74.94 Aligned_cols=48 Identities=31% Similarity=0.652 Sum_probs=42.5
Q ss_pred eecCccee-cCCcccCceeeccC-CccccCCCCeeeeCCCCceeeccccc
Q psy17325 68 CQDMNECE-QPGYCSQMCTNTKG-SYICSCNEGYVLEYDNHTCKAINHSA 115 (461)
Q Consensus 68 C~d~~eC~-~~~~C~~~C~~~~g-~~~C~C~~g~~l~~~~~~C~~~~~~~ 115 (461)
..|++||. .+++|+|.|.|+++ +|.|.|++||.|..++++|.+++++.
T Consensus 2 ~~d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~ 51 (69)
T 1kli_L 2 KDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 51 (69)
T ss_dssp CSCCCCTTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred CcccccccCCCCCcCCEeEcCCCCCEEEeCCCCCeECCCCCcccCccccc
Confidence 45789997 56789999999999 89999999999999999999988754
No 136
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.69 E-value=3.8e-06 Score=77.18 Aligned_cols=192 Identities=15% Similarity=0.099 Sum_probs=110.1
Q ss_pred eeEEEcCCCCceEEEEeecCCC--CcEEEEecCCCC-cEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceee
Q psy17325 195 RGMMLDPSPGTRWLFWTDWGEN--PRIERIGMDGSN-RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271 (461)
Q Consensus 195 ~~ia~d~~~g~~~ly~td~~~~--~~I~~~~~dG~~-~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~ 271 (461)
.||+++ .+ .||.+. +.. ..|.++++.... ...+....-....||+++ +++||.+....+
T Consensus 46 qGL~~~--~~--~Lyest-G~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~----------- 107 (262)
T 3nol_A 46 EGFFYR--NG--YFYEST-GLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNG----------- 107 (262)
T ss_dssp EEEEEE--TT--EEEEEE-EETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSS-----------
T ss_pred ceEEEE--CC--EEEEEC-CCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCC-----------
Confidence 899998 46 899997 443 589998887433 333322222223567776 789999987764
Q ss_pred eeccceeeeEEEEEecCCCCcceeeeEEeCCC-CceEEEEeCCeeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceE
Q psy17325 272 NVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG-SNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350 (461)
Q Consensus 272 ~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g-~~~~~l~~~~~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~ 350 (461)
.+.+.+++. +....+-.. +.|.++.+.++.||.|+.. +.+++.|-.....+.
T Consensus 108 -----------------------~v~v~D~~t~~~~~ti~~~--~eG~glt~dg~~L~~SdGs--~~i~~iDp~T~~v~~ 160 (262)
T 3nol_A 108 -----------------------LGFVWNIRNLRQVRSFNYD--GEGWGLTHNDQYLIMSDGT--PVLRFLDPESLTPVR 160 (262)
T ss_dssp -----------------------EEEEEETTTCCEEEEEECS--SCCCCEEECSSCEEECCSS--SEEEEECTTTCSEEE
T ss_pred -----------------------EEEEEECccCcEEEEEECC--CCceEEecCCCEEEEECCC--CeEEEEcCCCCeEEE
Confidence 456666543 323333222 3444455558899998732 344444433222222
Q ss_pred EEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeecc--C--CCCCcce
Q psy17325 351 RIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDL--M--GDNGVPA 426 (461)
Q Consensus 351 ~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~--~--~~~~~~~ 426 (461)
+...... ...+..++.|.. .+++||+..+..+.|.++|. .+|.....+... ++.... . ....+.+
T Consensus 161 ~I~V~~~------g~~~~~lNELe~--~~G~lyan~w~~~~I~vIDp-~tG~V~~~Id~~--~L~~~~~~~~~~~~vlNG 229 (262)
T 3nol_A 161 TITVTAH------GEELPELNELEW--VDGEIFANVWQTNKIVRIDP-ETGKVTGIIDLN--GILAEAGPLPSPIDVLNG 229 (262)
T ss_dssp EEECEET------TEECCCEEEEEE--ETTEEEEEETTSSEEEEECT-TTCBEEEEEECT--TGGGGSCSCCSSCCCEEE
T ss_pred EEEeccC------CccccccceeEE--ECCEEEEEEccCCeEEEEEC-CCCcEEEEEECC--cCccccccccCcCCceEE
Confidence 2111100 012455677777 57899999999999999999 477776555332 111000 0 0112224
Q ss_pred EEEeeeCCEEEEEeCC
Q psy17325 427 LALDLENGMLYYSTEG 442 (461)
Q Consensus 427 ~~l~~~~~~lYwtd~~ 442 (461)
+|++..+++||+|--.
T Consensus 230 IA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 230 IAWDKEHHRLFVTGKL 245 (262)
T ss_dssp EEEETTTTEEEEEETT
T ss_pred EEEcCCCCEEEEECCC
Confidence 4555557899999744
No 137
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.68 E-value=7.1e-09 Score=74.81 Aligned_cols=47 Identities=28% Similarity=0.488 Sum_probs=43.2
Q ss_pred CCCcccCCCCCCCCCceeCCC-CceEeCCCCCeecCCCCceecCccee
Q psy17325 29 DLAECKHKFGLCSNTCHPTPL-GALCTCPPGEILSNDSVTCQDMNECE 75 (461)
Q Consensus 29 ~~~~C~~~~~~C~~~C~~~~~-~~~C~C~~G~~l~~~~~~C~d~~eC~ 75 (461)
++++|..+++.|++.|.++++ +|.|.|++||.|..++++|.+++||.
T Consensus 4 d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~ 51 (69)
T 1kli_L 4 DQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 51 (69)
T ss_dssp CCCCTTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred ccccccCCCCCcCCEeEcCCCCCEEEeCCCCCeECCCCCcccCccccc
Confidence 467898888999999999998 79999999999999999999999984
No 138
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.68 E-value=9.3e-07 Score=88.99 Aligned_cols=177 Identities=13% Similarity=0.104 Sum_probs=104.8
Q ss_pred EEEecCCCCCceeEEEcCCC-CceEEEEeecCCCCcEEEEecCCCCc-EEEEe------cc-----cccceeEEeecc--
Q psy17325 184 IVLAKDNITQPRGMMLDPSP-GTRWLFWTDWGENPRIERIGMDGSNR-STIIS------TK-----IYWPNGLTLDIA-- 248 (461)
Q Consensus 184 ~~l~~~~~~~p~~ia~d~~~-g~~~ly~td~~~~~~I~~~~~dG~~~-~~i~~------~~-----~~~P~glavD~~-- 248 (461)
..++..++.+|++|++.|.. + .||+++. ..+|++++.+|... +.+.. .+ ...+.|||+++.
T Consensus 6 v~~va~gL~~P~~~a~~pdG~~--rl~V~er--~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~ 81 (463)
T 2wg3_C 6 IQEVVSGLRQPVGALHSGDGSQ--RLFILEK--EGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYK 81 (463)
T ss_dssp EEEEEEEESSEEEEECCSSSSC--CEEEEET--TTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHH
T ss_pred EEEeccCCCCceEEEECCCCCe--EEEEEeC--CceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCc
Confidence 34445567899999999974 3 5999993 46898888776531 11111 11 345788999985
Q ss_pred -CCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCC--------CceEEEEeCCe-----
Q psy17325 249 -TRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG--------SNASILVSGQL----- 314 (461)
Q Consensus 249 -~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g--------~~~~~l~~~~~----- 314 (461)
++.||++.+....-. . .+......+|.|..++. +..++|+....
T Consensus 82 ~n~~lYv~yt~~~~~~---------------------~-~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H 139 (463)
T 2wg3_C 82 KNGKLYVSYTTNQERW---------------------A-IGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKH 139 (463)
T ss_dssp HHCEEEEEEEECCCSS---------------------C-SSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSS
T ss_pred CCCEEEEEEeCCCCCc---------------------c-cCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcc
Confidence 678887653210000 0 00000002466666542 12345544211
Q ss_pred -eeeEEEeccCCeEEEeecCceeeE--E--Eeec-CCCCceEEEeecCCC-------------------eEEEeeCCCCC
Q psy17325 315 -YEALALDLENGMLYYSTLKCTRWL--F--WTDW-GENPRIERIGMDGSN-------------------RSTIISTKIYW 369 (461)
Q Consensus 315 -p~~iavd~~~~~lY~t~~~~~~~l--~--~~d~-~~~~~I~~~~~dG~~-------------------~~~l~~~~l~~ 369 (461)
...|+++| .|+||++.-.....- . -.+. ...++|.|++.||+. +..|.+..+.+
T Consensus 140 ~g~~l~fgp-DG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RN 218 (463)
T 2wg3_C 140 LGGQLLFGP-DGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHD 218 (463)
T ss_dssp CEEEEEECT-TSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSS
T ss_pred cCCcEeECC-CCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCC
Confidence 67899998 569999854310000 0 0000 124789999999951 22345589999
Q ss_pred ceeEEEecCCC------eEEEEcC
Q psy17325 370 PNGLTLDIATR------RVYFADS 387 (461)
Q Consensus 370 p~glaiD~~~~------~ly~~d~ 387 (461)
|.||++|+.++ +||.+|.
T Consensus 219 p~gla~dp~tg~~~G~l~~~~~D~ 242 (463)
T 2wg3_C 219 PGRCAVDRHPTDININLTILCSDS 242 (463)
T ss_dssp CCBEEEESSCSSTTCSEEEEEECC
T ss_pred cceEEECCCCCCcccceEEEeccc
Confidence 99999998754 6787885
No 139
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.66 E-value=2.8e-08 Score=102.41 Aligned_cols=84 Identities=26% Similarity=0.622 Sum_probs=64.8
Q ss_pred CCcccCCCCCCCCCceeCCCC-ceE-eCCCCCeecCCCCceecCcceec-CCcccC-----ceeeccCCcccc-CCCCee
Q psy17325 30 LAECKHKFGLCSNTCHPTPLG-ALC-TCPPGEILSNDSVTCQDMNECEQ-PGYCSQ-----MCTNTKGSYICS-CNEGYV 100 (461)
Q Consensus 30 ~~~C~~~~~~C~~~C~~~~~~-~~C-~C~~G~~l~~~~~~C~d~~eC~~-~~~C~~-----~C~~~~g~~~C~-C~~g~~ 100 (461)
+++|..+++.-...|.+++++ |.| .|++||. .++..|++++||.. ++.|.+ .|.++.++|+|. |++||.
T Consensus 3 IDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~Gyt--Gdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~ 80 (634)
T 1yo8_A 3 PDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFL--GNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYR 80 (634)
T ss_dssp -CGGGGCCSCTTCCEEECTTSCEEECCCCTTBC--SCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEE
T ss_pred ccccCCCCCCCCCEEecCCCCCeECCcCCCccC--CCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcc
Confidence 567865543333579999865 999 9999996 35689999999973 345865 799999999998 999998
Q ss_pred eeC-----------CCCceeeccccc
Q psy17325 101 LEY-----------DNHTCKAINHSA 115 (461)
Q Consensus 101 l~~-----------~~~~C~~~~~~~ 115 (461)
... +++.|.++++|.
T Consensus 81 G~~c~g~g~~~~~~dg~~C~dideC~ 106 (634)
T 1yo8_A 81 GNQPVGVGLEAAKTEKQVCEPENPCK 106 (634)
T ss_dssp ECCCEESSSHHHHSCCCCEEECCTTT
T ss_pred cCccccccccccccCCCccccccccc
Confidence 543 456788888775
No 140
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.66 E-value=9.5e-06 Score=73.84 Aligned_cols=192 Identities=12% Similarity=0.071 Sum_probs=108.7
Q ss_pred ceeEEEcCCCCceEEEEeecCCC--CcEEEEecCCCCc-EEEEecccccceeEEeeccCCeeEEecCCCceeeeccccee
Q psy17325 194 PRGMMLDPSPGTRWLFWTDWGEN--PRIERIGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270 (461)
Q Consensus 194 p~~ia~d~~~g~~~ly~td~~~~--~~I~~~~~dG~~~-~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~ 270 (461)
-.||+++. + .||.+. +.. ..|.++++..... ..+....-....||+++ +++||.+....+
T Consensus 23 tqGL~~~~--~--~Lyest-G~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~---------- 85 (243)
T 3mbr_X 23 TEGLFYLR--G--HLYEST-GETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNH---------- 85 (243)
T ss_dssp EEEEEEET--T--EEEEEE-CCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSS----------
T ss_pred cccEEEEC--C--EEEEEC-CCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCC----------
Confidence 56999986 6 899997 543 6899999974433 22322222233566665 799999987764
Q ss_pred eeeccceeeeEEEEEecCCCCcceeeeEEeCCCC-ceEEEEeCCeeeeEEEeccCCeEEEeecCceeeEEEeecCCCCce
Q psy17325 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS-NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRI 349 (461)
Q Consensus 271 ~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~-~~~~l~~~~~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I 349 (461)
.+.+.+.+.- ....+-.. +.|.++.+.++.||.|+.. +.|++.|-.....+
T Consensus 86 ------------------------~v~v~D~~tl~~~~ti~~~--~~Gwglt~dg~~L~vSdgs--~~l~~iDp~t~~~~ 137 (243)
T 3mbr_X 86 ------------------------EGFVYDLATLTPRARFRYP--GEGWALTSDDSHLYMSDGT--AVIRKLDPDTLQQV 137 (243)
T ss_dssp ------------------------EEEEEETTTTEEEEEEECS--SCCCEEEECSSCEEEECSS--SEEEEECTTTCCEE
T ss_pred ------------------------EEEEEECCcCcEEEEEeCC--CCceEEeeCCCEEEEECCC--CeEEEEeCCCCeEE
Confidence 4555555432 22222222 3445555668899998842 33344333222222
Q ss_pred EEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccC---CCCCcce
Q psy17325 350 ERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLM---GDNGVPA 426 (461)
Q Consensus 350 ~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~---~~~~~~~ 426 (461)
.+...... ...+..++.|.. .+++||...+..+.|.++|+ .+|.....+.-. ++..... .+...-+
T Consensus 138 ~~I~V~~~------g~~~~~lNeLe~--~~G~lyanvw~s~~I~vIDp-~tG~V~~~idl~--~l~~~~~~~~~~~~~vl 206 (243)
T 3mbr_X 138 GSIKVTAG------GRPLDNLNELEW--VNGELLANVWLTSRIARIDP-ASGKVVAWIDLQ--ALVPDADALTDSTNDVL 206 (243)
T ss_dssp EEEECEET------TEECCCEEEEEE--ETTEEEEEETTTTEEEEECT-TTCBEEEEEECG--GGSTTTTSCCCTTSSCE
T ss_pred EEEEEccC------CcccccceeeEE--eCCEEEEEECCCCeEEEEEC-CCCCEEEEEECC--cCccccccccCCcCCce
Confidence 11111000 012345667776 68999999999999999999 377765544322 1110000 0111123
Q ss_pred EEEee--eCCEEEEEeC
Q psy17325 427 LALDL--ENGMLYYSTE 441 (461)
Q Consensus 427 ~~l~~--~~~~lYwtd~ 441 (461)
-+||+ .+++||+|--
T Consensus 207 NGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 207 NGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEEEETTTTEEEEEET
T ss_pred EEEEEcCCCCEEEEECC
Confidence 45554 5789999963
No 141
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.62 E-value=1.1e-05 Score=79.88 Aligned_cols=248 Identities=9% Similarity=0.019 Sum_probs=133.9
Q ss_pred cCCeEEEEeCCCCeEEEEeCCCC-----cEEEEe------cCCCCCceeEEEcCCCCceEEEEeecCCC-----CcEEEE
Q psy17325 159 IGGHIYWLDSRLNRIEVCDENGT-----NRIVLA------KDNITQPRGMMLDPSPGTRWLFWTDWGEN-----PRIERI 222 (461)
Q Consensus 159 ~~~~ly~~d~~~~~I~~~~~~G~-----~~~~l~------~~~~~~p~~ia~d~~~g~~~ly~td~~~~-----~~I~~~ 222 (461)
..+.||+.....++|.++|.... ...++- ..+...|+++.+-|. | ||++..+.. ..|..+
T Consensus 94 ~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pd-G---i~Vs~~g~~~g~~~g~v~vl 169 (462)
T 2ece_A 94 ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPD-A---IYISALGNEEGEGPGGILML 169 (462)
T ss_dssp CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSS-C---EEEEEEEETTSCSCCEEEEE
T ss_pred cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCC-e---EEEEcCCCcCCCCCCeEEEE
Confidence 47789999999999999997432 122221 123347999999876 3 888875431 466666
Q ss_pred ecCCCCcEEEEeccccccee----EEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeE
Q psy17325 223 GMDGSNRSTIISTKIYWPNG----LTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGK 298 (461)
Q Consensus 223 ~~dG~~~~~i~~~~~~~P~g----lavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~ 298 (461)
+........-... -..|.+ +.+.+..+.+|.++...-..... | .+...+ .+.. .++|.+
T Consensus 170 D~~T~~v~~~~~~-~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~-g-----~~~~~~------~~~~----~d~V~v 232 (462)
T 2ece_A 170 DHYSFEPLGKWEI-DRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIED-G-----LKLEHL------KDRY----GNRIHF 232 (462)
T ss_dssp CTTTCCEEEECCS-BCTTCCCCCCEEEETTTTEEEECBCCCHHHHTT-C-----CCTTTH------HHHS----CCEEEE
T ss_pred ECCCCeEEEEEcc-CCCCccccceEEECCCCCEEEEccCcCcccccc-c-----cchhhh------hhcc----CCEEEE
Confidence 6653332211111 113333 44455667777776320000000 0 000000 0000 045777
Q ss_pred EeCCCCce-EEEEeC-C-e-eeeEEE--eccCCeEEEeec-----CceeeEEEeecCCCCceEEEeecCCC---eEEE-e
Q psy17325 299 ANMDGSNA-SILVSG-Q-L-YEALAL--DLENGMLYYSTL-----KCTRWLFWTDWGENPRIERIGMDGSN---RSTI-I 363 (461)
Q Consensus 299 ~~~~g~~~-~~l~~~-~-~-p~~iav--d~~~~~lY~t~~-----~~~~~l~~~d~~~~~~I~~~~~dG~~---~~~l-~ 363 (461)
.+++.... .++-.. . . |+.|++ +|.+..+|++.. . ++.|.....++.. .+++ +
T Consensus 233 ~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~L------------ss~V~v~~~d~g~~~~~~vIdi 300 (462)
T 2ece_A 233 WDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDL------------SSSIWLWFYEDGKWNAEKVIEI 300 (462)
T ss_dssp EETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTC------------CEEEEEEEEETTEEEEEEEEEE
T ss_pred EECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCC------------CceEEEEEecCCceeEEEEEeC
Confidence 77765332 222221 1 2 888877 999999999876 4 3333333332211 0111 0
Q ss_pred eC-----C-----------CCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccc-e----ee--ccCC
Q psy17325 364 ST-----K-----------IYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVE-F----TN--DLMG 420 (461)
Q Consensus 364 ~~-----~-----------l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~-~----~~--~~~~ 420 (461)
.. . -..|.+|.|.+++++||+++++.+.|..++.+..+.. +++.....+ . .. ....
T Consensus 301 ~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~-~lv~~I~tGG~~~~~~~~~G~~~ 379 (462)
T 2ece_A 301 PAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKP-VLTGKVKLGGIFHRADHPAGHKL 379 (462)
T ss_dssp CCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSC-EEEEEEECBTTTTCBCCTTSCCC
T ss_pred CCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCc-EEEEEEEeCCeeccccccccccC
Confidence 00 1 2469999999999999999999999999998422322 222111111 0 00 0001
Q ss_pred CCCcceEEEeeeCCEEEEEe
Q psy17325 421 DNGVPALALDLENGMLYYST 440 (461)
Q Consensus 421 ~~~~~~~~l~~~~~~lYwtd 440 (461)
.+.+..++|+.++.+||+|+
T Consensus 380 ~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 380 TGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CSCCCCEEECTTSSEEEEEC
T ss_pred CCCCCEEEEcCCCCEEEEEc
Confidence 12355788888899999999
No 142
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.62 E-value=1.8e-05 Score=77.47 Aligned_cols=208 Identities=10% Similarity=0.030 Sum_probs=118.5
Q ss_pred cceeeeeeeecCCeEEEEeCC-CCeEEEEeCCCCcEEEE-ecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCC
Q psy17325 149 DLVEGLAYDWIGGHIYWLDSR-LNRIEVCDENGTNRIVL-AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226 (461)
Q Consensus 149 ~~p~~iavd~~~~~ly~~d~~-~~~I~~~~~~G~~~~~l-~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG 226 (461)
..|.++++++.++.||+++.. .+.|.+++ ........ + .-|..+.+.+..+ ..|++.+. ..++..+++.|
T Consensus 125 ~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i----~~~~~~~~~~~~~--~~~~~~~~-dg~~~~vd~~g 196 (373)
T 2mad_H 125 PYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLL----SSPTCYHIHPGAP--STFYLLCA-QGGLAKTDHAG 196 (373)
T ss_pred CCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEc----CCCceEEEEeCCC--ceEEEEcC-CCCEEEEECCC
Confidence 468899999999999999875 68899999 65443222 2 2244466666655 67777643 35666666633
Q ss_pred CCcEEEEecc---cccce--eEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeC
Q psy17325 227 SNRSTIISTK---IYWPN--GLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301 (461)
Q Consensus 227 ~~~~~i~~~~---~~~P~--glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~ 301 (461)
.....+.... -..|. ..++....+.+||+.... .+.++++
T Consensus 197 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-----------------------------------~v~vid~ 241 (373)
T 2mad_H 197 GAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSG-----------------------------------KILQADI 241 (373)
T ss_pred cEEEEEeccccccCCcceeecceeEecCCEEEEEcCCc-----------------------------------eEEEEec
Confidence 3221111000 01121 123344455666554221 2444444
Q ss_pred CCCceEEEE----------eCCe-eee---EEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCC
Q psy17325 302 DGSNASILV----------SGQL-YEA---LALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKI 367 (461)
Q Consensus 302 ~g~~~~~l~----------~~~~-p~~---iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l 367 (461)
.+...+++. .... |.+ +++++.+++||++... .-.|++....+.|...++.......-+ .--
T Consensus 242 ~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~---~~~~~~~~~~~~V~VID~~t~~vv~~i-~~g 317 (373)
T 2mad_H 242 SAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSE---QSAWKLHAAAKEVTSVTGLVGQTSSQI-SLG 317 (373)
T ss_pred cCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEecc---CCcccccCCCCeEEEEECCCCEEEEEE-ECC
Confidence 333221111 0111 555 8999999999997542 011111112456777776544332222 222
Q ss_pred CCceeEEEecCCC-eEEEEcCCCCeEEEEEecCCCCeE
Q psy17325 368 YWPNGLTLDIATR-RVYFADSKLDFIDFCNYDGTGRQQ 404 (461)
Q Consensus 368 ~~p~glaiD~~~~-~ly~~d~~~~~I~~~~~~g~g~~~ 404 (461)
..|.+|+++++++ +||.+....+.|..+|+. ++...
T Consensus 318 ~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~-t~~vv 354 (373)
T 2mad_H 318 HDVDAISVAQDGGPDLYALSAGTEVLHIYDAG-AGDQD 354 (373)
T ss_pred CCcCeEEECCCCCeEEEEEcCCCCeEEEEECC-CCCEE
Confidence 3699999998888 788888888999999993 45543
No 143
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=98.62 E-value=4.2e-08 Score=81.64 Aligned_cols=102 Identities=27% Similarity=0.664 Sum_probs=70.2
Q ss_pred ccCCCCCCCCCCCC-----------CCCCCCCCCCC--CCCcccCCCCCCCCCceeCCCCceEeCCCCCeecCCCCcee-
Q psy17325 4 RCVNLTKVCDGKTD-----------CPNGADEGPGC--DLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ- 69 (461)
Q Consensus 4 ~Ci~~~~~Cd~~~d-----------C~dg~de~~~C--~~~~C~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~- 69 (461)
+|......|..... |+.|+ .+..| ++++|..++......|.+.+++|.|.|++||. +..|+
T Consensus 7 eC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy-~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~----G~~C~~ 81 (135)
T 2vj3_A 7 ECSLGANPCEHAGKCINTLGSFECQCLQGY-TGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYE----GVHCEV 81 (135)
T ss_dssp TTTSSSCSSSTTCEEEECSSSEEEECCTTE-ESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEE----SSSSCE
T ss_pred cccCCCCCCCCCCEeECCCCCEEEECCCCC-cCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCc----CCccee
Confidence 45544455665444 44444 23456 46788766544456799999999999999996 56786
Q ss_pred cCcceecCCccc--CceeeccCCccccCCCCeeeeCCCCce-eeccccc
Q psy17325 70 DMNECEQPGYCS--QMCTNTKGSYICSCNEGYVLEYDNHTC-KAINHSA 115 (461)
Q Consensus 70 d~~eC~~~~~C~--~~C~~~~g~~~C~C~~g~~l~~~~~~C-~~~~~~~ 115 (461)
++++|. ...|. ..|.+..++|.|.|++||. +..| .+++++.
T Consensus 82 ~~~~C~-~~~C~~~g~C~~~~g~~~C~C~~G~~----G~~C~~~i~~C~ 125 (135)
T 2vj3_A 82 NTDECA-SSPCLHNGRCLDKINEFQCECPTGFT----GHLCQVDLHHIL 125 (135)
T ss_dssp ECCTTT-TCCSTTTCEEEECSSCEEEECCTTEE----SSSSCEECC---
T ss_pred cCCccc-CCCcCCCCEeECCCCCeEEECCCCCc----CCccCccCcccc
Confidence 788886 34665 4899999999999999996 5667 3566654
No 144
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.60 E-value=7.6e-06 Score=75.75 Aligned_cols=235 Identities=11% Similarity=0.038 Sum_probs=144.7
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCC-CcEEEEecCC-CCCceeEEEcCCCCceEEEEeecC--CCCcEEEEecC
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENG-TNRIVLAKDN-ITQPRGMMLDPSPGTRWLFWTDWG--ENPRIERIGMD 225 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G-~~~~~l~~~~-~~~p~~ia~d~~~g~~~ly~td~~--~~~~I~~~~~d 225 (461)
.+..+++.+.+..|+++. .+.|.+.++++ .....+.... ...+..+++.|... +|+++... ....|+..+++
T Consensus 43 ~v~~~~~spdg~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~--~l~~~~~~~~~~~~l~~~~~~ 118 (297)
T 2ojh_A 43 LFEAPNWSPDGKYLLLNS--EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGA--LYAISDKVEFGKSAIYLLPST 118 (297)
T ss_dssp CCEEEEECTTSSEEEEEE--TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSS--EEEEEECTTTSSCEEEEEETT
T ss_pred ceEeeEECCCCCEEEEEc--CCeEEEEeCCCCCCceEeccccccccccceEECCCCC--EEEEEEeCCCCcceEEEEECC
Confidence 466788887777777765 57999999887 6555544322 24467899999866 88877622 24788988888
Q ss_pred CCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCc
Q psy17325 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305 (461)
Q Consensus 226 G~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~ 305 (461)
+.....+... ..+..+++.+.++.|+++......+ .|+..++++..
T Consensus 119 ~~~~~~~~~~--~~~~~~~~spdg~~l~~~~~~~~~~--------------------------------~l~~~~~~~~~ 164 (297)
T 2ojh_A 119 GGTPRLMTKN--LPSYWHGWSPDGKSFTYCGIRDQVF--------------------------------DIYSMDIDSGV 164 (297)
T ss_dssp CCCCEECCSS--SSEEEEEECTTSSEEEEEEEETTEE--------------------------------EEEEEETTTCC
T ss_pred CCceEEeecC--CCccceEECCCCCEEEEEECCCCce--------------------------------EEEEEECCCCc
Confidence 7665444322 2367788888888887655433221 36666666555
Q ss_pred eEEEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEE
Q psy17325 306 ASILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384 (461)
Q Consensus 306 ~~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~ 384 (461)
...+..... +..++++|.+..|+++... ....+|+..++++.....+. ........+++++.+..|++
T Consensus 165 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----------~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~ 233 (297)
T 2ojh_A 165 ETRLTHGEGRNDGPDYSPDGRWIYFNSSR----------TGQMQIWRVRVDGSSVERIT-DSAYGDWFPHPSPSGDKVVF 233 (297)
T ss_dssp EEECCCSSSCEEEEEECTTSSEEEEEECT----------TSSCEEEEEETTSSCEEECC-CCSEEEEEEEECTTSSEEEE
T ss_pred ceEcccCCCccccceECCCCCEEEEEecC----------CCCccEEEECCCCCCcEEEe-cCCcccCCeEECCCCCEEEE
Confidence 544443333 7889999988877766432 12456777776666555544 33345667889888888887
Q ss_pred EcCC----------CCeEEEEEecCCCCeEEEEEc-cccceeeccCCCCCcceEEEeeeCCEEEEEeCCC
Q psy17325 385 ADSK----------LDFIDFCNYDGTGRQQVILID-LMVEFTNDLMGDNGVPALALDLENGMLYYSTEGA 443 (461)
Q Consensus 385 ~d~~----------~~~I~~~~~~g~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~~~ 443 (461)
+... ...|...+++ ++....+... ..... ...+++..++..|+++....
T Consensus 234 ~~~~~~~~~~~~~~~~~l~~~d~~-~~~~~~~~~~~~~~~~---------~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 234 VSYDADVFDHPRDLDVRVQLMDMD-GGNVETLFDLFGGQGT---------MNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEETTCCSCCSSEEEEEEEEETT-SCSCEEEEEEEESTTT---------SCSCCBCTTSSEEEEEEECC
T ss_pred EEcCCCCCcccccCceEEEEEecC-CCCceeeeccCCCCcc---------cccceECCCCCEEEEEEecc
Confidence 7542 2568889983 3333222211 11110 11345556677777765443
No 145
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.59 E-value=8.7e-05 Score=72.10 Aligned_cols=255 Identities=14% Similarity=0.165 Sum_probs=145.8
Q ss_pred ceeeeeeeecCCeEEEEeCCCC-----eEEEEeCCC-------C-cE-EEEe----cCCCCCceeEEEcCCCCceEEEEe
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLN-----RIEVCDENG-------T-NR-IVLA----KDNITQPRGMMLDPSPGTRWLFWT 211 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~-----~I~~~~~~G-------~-~~-~~l~----~~~~~~p~~ia~d~~~g~~~ly~t 211 (461)
.|.|+++|...+++|++-.+.. ++-.++.+. . .. +... ...+..+.++.+|+. + .|++.
T Consensus 27 ~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP~w~~~~~lvsV~~v~iD~~-~--rLWVL 103 (381)
T 3q6k_A 27 ISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSGHKTGKELTSIYQPVIDDC-R--RLWVV 103 (381)
T ss_dssp CCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECTTCSSSCSSSCEEEEEECTT-C--EEEEE
T ss_pred ceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCCCCccccceEEeeEEEEcCC-C--cEEEE
Confidence 5889999734788999887632 444444321 1 11 1111 235778999999985 6 79999
Q ss_pred ecCC--------------CCcEEEEecCCC--Cc-EEE-Eecc----cccceeEEeec-c------CCeeEEecCCCcee
Q psy17325 212 DWGE--------------NPRIERIGMDGS--NR-STI-ISTK----IYWPNGLTLDI-A------TRRVYFADSKLDFI 262 (461)
Q Consensus 212 d~~~--------------~~~I~~~~~dG~--~~-~~i-~~~~----~~~P~glavD~-~------~~~ly~~d~~~~~i 262 (461)
|.+. .++|...++... .. +.+ +... -...+.|+||. . ...+|++|....-|
T Consensus 104 DtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gL 183 (381)
T 3q6k_A 104 DIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGAL 183 (381)
T ss_dssp ECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEE
T ss_pred eCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcE
Confidence 9652 257888888754 22 222 2111 12467899993 2 57899999877655
Q ss_pred eecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCeeeeEEEecc----CCeEEEeecCceeeE
Q psy17325 263 DCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLE----NGMLYYSTLKCTRWL 338 (461)
Q Consensus 263 ~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~p~~iavd~~----~~~lY~t~~~~~~~l 338 (461)
-+.++...+. .|.+ +..-. +..-.....+|...+ . .....|||++|. ++.|||.-..
T Consensus 184 IVydl~~~~s------wRv~---~~~~~--pd~~~~~~i~G~~~~--~-~~Gi~gIaLsp~~~~~~~~LYf~pls----- 244 (381)
T 3q6k_A 184 FIYDHKKQDS------WNVT---HPTFK--AERPTKFDYGGKEYE--F-KAGIFGITLGDRDSEGNRPAYYLAGS----- 244 (381)
T ss_dssp EEEETTTTEE------EEEE---CGGGS--CCSCEEEEETTEEEE--E-CCCEEEEEECCCCTTSCCEEEEEESS-----
T ss_pred EEEECCCCcE------EEEc---cCCCc--cccCcceEECCEEeE--e-ccCceEEEecCCcCCCCeEEEEEECC-----
Confidence 5444322110 0000 00000 000001111222111 0 011789999998 7889988766
Q ss_pred EEeecCCCCceEEEee----c---CCCeEEEeeCC-CCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCC-----CeEE
Q psy17325 339 FWTDWGENPRIERIGM----D---GSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTG-----RQQV 405 (461)
Q Consensus 339 ~~~d~~~~~~I~~~~~----d---G~~~~~l~~~~-l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g-----~~~~ 405 (461)
+.+++++.. + ....+.+.... .....++++|..+|.||+++...+.|.+.+. ++ .+..
T Consensus 245 -------s~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~--~~~~~~~~n~~ 315 (381)
T 3q6k_A 245 -------AIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNT--QKMPLRMKNTD 315 (381)
T ss_dssp -------CSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEET--TSCSBCGGGEE
T ss_pred -------CCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeC--CCCccccCceE
Confidence 455666652 2 22334444332 2455678898788999999999999999998 44 2333
Q ss_pred EEEccccceeeccCCCCCcceEEEeee-CCEEEEEeCCCce
Q psy17325 406 ILIDLMVEFTNDLMGDNGVPALALDLE-NGMLYYSTEGAEF 445 (461)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~lYwtd~~~~~ 445 (461)
++.... .+. .|-++++. +++||++...-+.
T Consensus 316 ~l~~d~-~l~---------~pd~~~i~~~g~Lwv~sn~l~~ 346 (381)
T 3q6k_A 316 VVYTSS-RFV---------FGTDISVDSKGGLWFMSNGFPP 346 (381)
T ss_dssp EEEECT-TCC---------SEEEEEECTTSCEEEEECSCCS
T ss_pred EEEECC-Ccc---------ccCeEEECCCCeEEEEECcchH
Confidence 333322 322 36677774 6899998766443
No 146
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.57 E-value=2.7e-08 Score=68.58 Aligned_cols=44 Identities=30% Similarity=0.753 Sum_probs=39.1
Q ss_pred ccee-cCCcccCceeeccCCccccCCCCeeeeCCCCceeeccccc
Q psy17325 72 NECE-QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA 115 (461)
Q Consensus 72 ~eC~-~~~~C~~~C~~~~g~~~C~C~~g~~l~~~~~~C~~~~~~~ 115 (461)
+||. .++.|+|.|.|++|+|.|.|++||.|..++++|.++++++
T Consensus 2 dEC~~~~~~C~~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~ 46 (55)
T 2jkh_L 2 KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYP 46 (55)
T ss_dssp CCTTTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEESSSSC
T ss_pred ccccCCCCCcCcEeEcCCCCeEEeCCCCCEECCCCCeeccCcccc
Confidence 5776 3567999999999999999999999999999999998764
No 147
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.57 E-value=1.1e-05 Score=78.31 Aligned_cols=193 Identities=13% Similarity=0.158 Sum_probs=122.6
Q ss_pred cCccceeeeeeeecCCeEEEEeCCC---------------CeEEEEeCCCC--c-E-EEEecCCC----CCceeEEEc-C
Q psy17325 146 SGLDLVEGLAYDWIGGHIYWLDSRL---------------NRIEVCDENGT--N-R-IVLAKDNI----TQPRGMMLD-P 201 (461)
Q Consensus 146 ~g~~~p~~iavd~~~~~ly~~d~~~---------------~~I~~~~~~G~--~-~-~~l~~~~~----~~p~~ia~d-~ 201 (461)
.+|.++.++.+|. .++|++.|++. -+|.++|+... . . +..+.... .....|++| .
T Consensus 84 ~~lvsV~~v~iD~-~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~ 162 (381)
T 3q6k_A 84 KELTSIYQPVIDD-CRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVA 162 (381)
T ss_dssp CSSSCEEEEEECT-TCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEES
T ss_pred cceEEeeEEEEcC-CCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecc
Confidence 4677889999995 78999999772 16888897765 3 2 22232211 235679999 2
Q ss_pred --C----CCceEEEEeecCCCCcEEEEecCC-CCcEEEEeccc------------------ccceeEEeecc----CCee
Q psy17325 202 --S----PGTRWLFWTDWGENPRIERIGMDG-SNRSTIISTKI------------------YWPNGLTLDIA----TRRV 252 (461)
Q Consensus 202 --~----~g~~~ly~td~~~~~~I~~~~~dG-~~~~~i~~~~~------------------~~P~glavD~~----~~~l 252 (461)
. .+ ++|+||. ..+.|...++.. ..++++ +..+ ....|||+++. .+.|
T Consensus 163 ~~~~~c~~~--~aYItD~-~~~gLIVydl~~~~swRv~-~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~L 238 (381)
T 3q6k_A 163 NPKGDCSET--FVYITNF-LRGALFIYDHKKQDSWNVT-HPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPA 238 (381)
T ss_dssp CTTTTSCSE--EEEEEET-TTTEEEEEETTTTEEEEEE-CGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEE
T ss_pred cCCCCCCcc--EEEEEcC-CCCcEEEEECCCCcEEEEc-cCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEE
Confidence 2 45 9999995 456888888864 333333 2111 13345666554 4556
Q ss_pred EEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEe---C-C---CCceEEEEeCCe---eeeEEEec
Q psy17325 253 YFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN---M-D---GSNASILVSGQL---YEALALDL 322 (461)
Q Consensus 253 y~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~---~-~---g~~~~~l~~~~~---p~~iavd~ 322 (461)
||.-..+.. ++++. + + ....+.+...+. ..++++|+
T Consensus 239 Yf~plss~~----------------------------------ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~ 284 (381)
T 3q6k_A 239 YYLAGSAIK----------------------------------VYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDP 284 (381)
T ss_dssp EEEESSCSE----------------------------------EEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECT
T ss_pred EEEECCCCc----------------------------------EEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeC
Confidence 665544433 23222 1 1 233444444431 44678988
Q ss_pred cCCeEEEeecCceeeEEEeecCCCCceEEEeecC-----CCeEEEe-eCCCCCceeEEEecCCCeEEEEcCCCC
Q psy17325 323 ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG-----SNRSTII-STKIYWPNGLTLDIATRRVYFADSKLD 390 (461)
Q Consensus 323 ~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG-----~~~~~l~-~~~l~~p~glaiD~~~~~ly~~d~~~~ 390 (461)
.+|.||+++.. ...|.+.+.++ .+..+++ ...+.||.+|++| .++.||+...+..
T Consensus 285 ~~G~ly~~~~~------------~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~-~~g~Lwv~sn~l~ 345 (381)
T 3q6k_A 285 KTKVIFFAEAN------------TKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVD-SKGGLWFMSNGFP 345 (381)
T ss_dssp TTCEEEEEESS------------SSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEEC-TTSCEEEEECSCC
T ss_pred CCCeEEEEecc------------CCeEEEEeCCCCccccCceEEEEECCCccccCeEEEC-CCCeEEEEECcch
Confidence 89999999988 77788887776 3445554 4579999999999 6789999876543
No 148
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.57 E-value=1e-08 Score=88.23 Aligned_cols=92 Identities=34% Similarity=0.726 Sum_probs=61.4
Q ss_pred CCCCCCC---CCCCC-CCCc--ccCCCCCC----CCCceeCCC----CceEeCCCC------------------------
Q psy17325 17 DCPNGAD---EGPGC-DLAE--CKHKFGLC----SNTCHPTPL----GALCTCPPG------------------------ 58 (461)
Q Consensus 17 dC~dg~d---e~~~C-~~~~--C~~~~~~C----~~~C~~~~~----~~~C~C~~G------------------------ 58 (461)
.|+.|+- .+..| ++++ |......| ...|.+..+ +|.|.|++|
T Consensus 27 ~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~~~~~C~~C~~~~~~~y~C~C~~ 106 (162)
T 1uzk_A 27 DCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPG 106 (162)
T ss_dssp ECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHTTTCCEETTTTEECCCTTSHHHHHHCTT
T ss_pred eCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCCcCCCcccCCCCCCCCceeECCC
Confidence 4676663 24567 4555 76543333 345666554 455555554
Q ss_pred ---CeecCCCCceecCcceec-CCcccC-ceeeccCCccccCCCCeeeeCCCCce
Q psy17325 59 ---EILSNDSVTCQDMNECEQ-PGYCSQ-MCTNTKGSYICSCNEGYVLEYDNHTC 108 (461)
Q Consensus 59 ---~~l~~~~~~C~d~~eC~~-~~~C~~-~C~~~~g~~~C~C~~g~~l~~~~~~C 108 (461)
|....++..|++++||.. +..|.+ .|+|+.++|.|.|++||.+..++++|
T Consensus 107 g~G~~~~~~~~~c~dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy~g~~d~~~C 161 (162)
T 1uzk_A 107 GEGFRPNPITVILEDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 161 (162)
T ss_dssp CTTEEECTTTCCEEECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBCTTTCBB
T ss_pred CCCcccCCCCCccCccccccCCCCCcCCCEeEcCCCCEEeeCCCCccCCCCCCcc
Confidence 444444567899999984 457874 99999999999999999999888887
No 149
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.57 E-value=4e-08 Score=84.54 Aligned_cols=71 Identities=32% Similarity=0.652 Sum_probs=50.7
Q ss_pred CCCcccCCCCCC-CCCceeCCCCceEeCCCCCeecCCCCceecCcc--eecC-Ccc----cCceeeccC----CccccCC
Q psy17325 29 DLAECKHKFGLC-SNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE--CEQP-GYC----SQMCTNTKG----SYICSCN 96 (461)
Q Consensus 29 ~~~~C~~~~~~C-~~~C~~~~~~~~C~C~~G~~l~~~~~~C~d~~e--C~~~-~~C----~~~C~~~~g----~~~C~C~ 96 (461)
+++||.. +..| ...|++++++|.|.|++||.+..++++|+++++ |... ..| ...|.+..+ +|.|.|+
T Consensus 2 dideC~~-~~~C~~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~ 80 (162)
T 1uzk_A 2 DVNECLD-PTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCS 80 (162)
T ss_dssp CCCGGGS-TTSSBTSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHTT
T ss_pred ccccCCC-CCCCCCCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCC
Confidence 4678874 2346 467999999999999999999888999999987 8632 223 447777766 6777777
Q ss_pred CCee
Q psy17325 97 EGYV 100 (461)
Q Consensus 97 ~g~~ 100 (461)
+||.
T Consensus 81 ~G~~ 84 (162)
T 1uzk_A 81 LGKA 84 (162)
T ss_dssp TCCE
T ss_pred CCCC
Confidence 7665
No 150
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=98.56 E-value=2.3e-08 Score=67.67 Aligned_cols=42 Identities=26% Similarity=0.634 Sum_probs=31.9
Q ss_pred ccCCCCCCCCCceeCCCCceEeCCCCCeecCCCCceecCcce
Q psy17325 33 CKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC 74 (461)
Q Consensus 33 C~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~d~~eC 74 (461)
|..++..|.+.|.+++++|.|.|++||.|..++++|++++||
T Consensus 1 C~~~ng~C~~~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~ 42 (51)
T 1kig_L 1 CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVSTERF 42 (51)
T ss_dssp CCTTTTSSSSCCCEETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred CCCCCCCcCCEeEcCCCCeEEeCCCCcEECCCCCccccCCcc
Confidence 444566777778888888888888888877778888887776
No 151
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=98.55 E-value=4.2e-08 Score=68.46 Aligned_cols=52 Identities=21% Similarity=0.554 Sum_probs=44.3
Q ss_pred ccCCCCCCCCCceeCC-CCceEeCCCCCeecCCCCceecCcceecCCcccCceeecc
Q psy17325 33 CKHKFGLCSNTCHPTP-LGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTK 88 (461)
Q Consensus 33 C~~~~~~C~~~C~~~~-~~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~~C~~~~ 88 (461)
|..+++.|++.|.+++ ++|.|.|++||.|..|+++|.++++ ..|.+.|.|..
T Consensus 2 C~~~nggC~~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~~----~pC~~~c~n~~ 54 (59)
T 2wph_E 2 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVP----FPCGRVSVSQT 54 (59)
T ss_dssp TTTGGGGCSSEEEECSTTCEEEECCTTEEECTTSSCEEESSS----SCTTCCCSCCC
T ss_pred CcCCCCCcCCEeEeCCCCCEEeeCCCCcEECCCCCcccCCCC----CCCCCcccccc
Confidence 5667788999999999 5999999999999999999998754 47888887754
No 152
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.52 E-value=5.3e-05 Score=72.49 Aligned_cols=188 Identities=16% Similarity=0.137 Sum_probs=114.9
Q ss_pred eEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCC---CCce--EEEEeecCC--CCcEEEEecCCCC--cEEE
Q psy17325 162 HIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPS---PGTR--WLFWTDWGE--NPRIERIGMDGSN--RSTI 232 (461)
Q Consensus 162 ~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~---~g~~--~ly~td~~~--~~~I~~~~~dG~~--~~~i 232 (461)
.++++-...+.+.+.+++|+....+-. .++.++.+-|. .|+. .+|.++ .. ..+|...++|... .+.+
T Consensus 41 s~ii~t~k~~gL~Vydl~G~~l~~~~~---g~~nnVD~r~~~~l~g~~~dla~as~-R~~~~n~l~vf~iDp~~~~l~~i 116 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSLDGKMLHSYNT---GKLNNVDIRYDFPLNGKKVDIAAASN-RSEGKNTIEIYAIDGKNGTLQSM 116 (355)
T ss_dssp CEEEEEETTTEEEEEETTSCEEEEECC---SCEEEEEEEEEEEETTEEEEEEEEEE-CSTTCCEEEEEEECTTTCCEEEC
T ss_pred cEEEEEcCCCCEEEEcCCCcEEEEccC---CCcccEEEecccccCCceEeEEEEeC-CCCCCCeEEEEEECCCCCceeec
Confidence 345544445789999999988777632 34677666542 1111 468888 44 5678777776322 2223
Q ss_pred ------EecccccceeEEe--eccCCe--eEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEe-C
Q psy17325 233 ------ISTKIYWPNGLTL--DIATRR--VYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN-M 301 (461)
Q Consensus 233 ------~~~~~~~P~glav--D~~~~~--ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~-~ 301 (461)
+.+.+..|.||++ ++.+++ +|+++.. +.++. +.... .
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q-------------------------------~~l~~~~ 164 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQ-------------------------------YELKADK 164 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS-SEEEE-------------------------------EEEEECT
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC-CeEEE-------------------------------EEEEeCC
Confidence 1244578999999 876664 6666665 33321 11111 1
Q ss_pred CCCce-E---EEEeCCeeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCC---CeEEEe---eCCCC-Cc
Q psy17325 302 DGSNA-S---ILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGS---NRSTII---STKIY-WP 370 (461)
Q Consensus 302 ~g~~~-~---~l~~~~~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~---~~~~l~---~~~l~-~p 370 (461)
+|+.. + .+-...-|+++++|+..+.||+++.. .+ |++.+.+.. ..+.+. ...+. .|
T Consensus 165 ~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd------------~G-Iw~~da~p~~~~~~~~v~~~~~g~l~aDv 231 (355)
T 3amr_A 165 NGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEED------------EA-IWKFSAEPDGGSNGTVIDRADGRHLTRDI 231 (355)
T ss_dssp TSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETT------------TE-EEEEECSTTSCSCCEEEEEBSSSSBCSCE
T ss_pred CCcccceEEEEecCCCCcceEEEcCCCCeEEEeccc------------ce-EEEEeCCcCCCCCceEEEEecCCccccCc
Confidence 22111 1 11111129999999999999998876 44 888885532 233332 13344 79
Q ss_pred eeEEEecCC---CeEEEEcCCCCeEEEEEec
Q psy17325 371 NGLTLDIAT---RRVYFADSKLDFIDFCNYD 398 (461)
Q Consensus 371 ~glaiD~~~---~~ly~~d~~~~~I~~~~~~ 398 (461)
.||+|.+.. ++|++++.+.++...++..
T Consensus 232 EGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 232 EGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred ceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 999996433 5799999888888888883
No 153
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.52 E-value=9.7e-06 Score=82.87 Aligned_cols=248 Identities=13% Similarity=0.122 Sum_probs=145.2
Q ss_pred eeEEEecc--ccceeecccccCcccccceEEEcCccceeeeee-e-ecCCeEEEEe-----------------CCCCeEE
Q psy17325 116 AFLIISNR--HSILVADLEEKGKDHRAQDIVVSGLDLVEGLAY-D-WIGGHIYWLD-----------------SRLNRIE 174 (461)
Q Consensus 116 ~~l~~~~~--~~I~~~~l~~~~~~~s~~~~~~~g~~~p~~iav-d-~~~~~ly~~d-----------------~~~~~I~ 174 (461)
.++++... ..|.++++..... .+.+-.+.-..|.|+++ . +.++.+|.+. ...+.+.
T Consensus 102 ~~lfVnd~~~~rVavIdl~t~~~---~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 102 RFLFMNDKANTRVARVRCDVMKC---DAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEETTTTEEEEEETTTTEE---EEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCceE---eeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 34555442 3466666653211 11111233357999998 4 7899999994 3345788
Q ss_pred EEeCCCCcEE-EEecCCCCCceeEEEcCCCCceEEEEeecCCCC------------------------------------
Q psy17325 175 VCDENGTNRI-VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENP------------------------------------ 217 (461)
Q Consensus 175 ~~~~~G~~~~-~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~------------------------------------ 217 (461)
++|.+..... ++..++ +|.+++++|..+ ++|+|...++.
T Consensus 179 vID~~t~~v~~qI~Vgg--~pd~~~~spdGk--~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~ 254 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSG--NLDNCDADYEGK--WAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN 254 (595)
T ss_dssp EEETTTTEEEEEEEESS--CCCCEEECSSSS--EEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred EEECCCCeEEEEEEeCC--CccceEECCCCC--EEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEEC
Confidence 9998865433 222233 699999999977 99999844321
Q ss_pred cEEEEecCC---CCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcce
Q psy17325 218 RIERIGMDG---SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294 (461)
Q Consensus 218 ~I~~~~~dG---~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~ 294 (461)
.+..++... +.....+.. -..|.|+++.+.++++|+++...+.+...+....+.
T Consensus 255 ~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~---------------------- 311 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDA---------------------- 311 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHH----------------------
T ss_pred cEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECccccc----------------------
Confidence 122222221 110111211 137999999999999999999887654322210000
Q ss_pred eeeEEeCCCCceEEEEe--CCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecC-------CC-eEEEe
Q psy17325 295 KIGKANMDGSNASILVS--GQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG-------SN-RSTII 363 (461)
Q Consensus 295 ~I~~~~~~g~~~~~l~~--~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG-------~~-~~~l~ 363 (461)
...-+++-. ..++.. .++ |+.+++|+.+ ++|.+..- .+.|.+.+++. .. ..++-
T Consensus 312 -~~~~~l~~~-~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~l------------dsqV~kwdi~~a~~~~~g~~~~~vi~ 376 (595)
T 1fwx_A 312 -VFYENADPR-SAVVAEPELGLGPLHTAFDGRG-NAYTSLFL------------DSQVVKWNIEDAIRAYAGEKVDPIKD 376 (595)
T ss_dssp -HHHSCCCGG-GGEEECCBCCSCEEEEEECTTS-EEEEEETT------------TTEEEEEEHHHHHHHHHTCSCCCEEE
T ss_pred -ccccccCcc-cceEEEcCCCCCcceEEECCCC-eEEEEEec------------CCcEEEEEhhHhhhhhcccccceeEE
Confidence 000000100 112222 223 9999999976 99998776 67777777654 11 23332
Q ss_pred e-CCCCCc------eeEEEecCCCeEEEEcCCC-CeE-----------EEEEecCCCCeEEEEEcc
Q psy17325 364 S-TKIYWP------NGLTLDIATRRVYFADSKL-DFI-----------DFCNYDGTGRQQVILIDL 410 (461)
Q Consensus 364 ~-~~l~~p------~glaiD~~~~~ly~~d~~~-~~I-----------~~~~~~g~g~~~~~~~~~ 410 (461)
. .--.+| .|+++++++++||.++... +++ ..+++ +|...+++.+.
T Consensus 377 kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~di--s~~~m~lv~d~ 440 (595)
T 1fwx_A 377 KLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDI--SGDKMVLVHDG 440 (595)
T ss_dssp EEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEEC--SSSSCEEEEEE
T ss_pred EeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEc--CCCcEEEEEEE
Confidence 1 122244 7888899999999998877 676 77888 56655555543
No 154
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.51 E-value=0.00022 Score=73.78 Aligned_cols=228 Identities=7% Similarity=-0.019 Sum_probs=135.4
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeC---CCCcEEEEecCCCCCceeEEEc----CCCCceEEEEeecCCCCcEEEE
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDE---NGTNRIVLAKDNITQPRGMMLD----PSPGTRWLFWTDWGENPRIERI 222 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~---~G~~~~~l~~~~~~~p~~ia~d----~~~g~~~ly~td~~~~~~I~~~ 222 (461)
.|.++++++.++.+|+++. .+.|.++|+ .++....+..+ ..|++|+++ |..+ ++|+++. ..+.|..+
T Consensus 198 ~p~~v~~SpDGr~lyv~~~-dg~V~viD~~~~t~~~v~~i~~G--~~P~~ia~s~~~~pDGk--~l~v~n~-~~~~v~Vi 271 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGR-DGKVNMIDLWMKEPTTVAEIKIG--SEARSIETSKMEGWEDK--YAIAGAY-WPPQYVIM 271 (567)
T ss_dssp CEEEEEECTTSCEEEEEET-TSEEEEEETTSSSCCEEEEEECC--SEEEEEEECCSTTCTTT--EEEEEEE-ETTEEEEE
T ss_pred CccceEECCCCCEEEEEcC-CCeEEEEECCCCCCcEeEEEecC--CCCceeEEccccCCCCC--EEEEEEc-cCCeEEEE
Confidence 5889999999999999874 689999998 44444443332 459999999 5766 9999984 34577777
Q ss_pred ecCCCCcEEEEeccc-----------ccceeEEeeccCCeeEEecCCCceeeecccceee-----eeccc---------e
Q psy17325 223 GMDGSNRSTIISTKI-----------YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT-----NVNYS---------T 277 (461)
Q Consensus 223 ~~dG~~~~~i~~~~~-----------~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~-----~v~~~---------~ 277 (461)
+.........+...- ..+.+|+.......++++-...+.|..++..... .+... .
T Consensus 272 D~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~p 351 (567)
T 1qks_A 272 DGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDG 351 (567)
T ss_dssp ETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECT
T ss_pred ECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECC
Confidence 654333322232210 1334666655555556665556666555432211 11111 1
Q ss_pred eeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeC-Ce-e---eeEE-EeccCCeEEEeecCceeeEEEeecCCCCceEE
Q psy17325 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG-QL-Y---EALA-LDLENGMLYYSTLKCTRWLFWTDWGENPRIER 351 (461)
Q Consensus 278 ~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~-~~-p---~~ia-vd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~ 351 (461)
=.+++|-++..+ ++|.+.+.........+.. +. | +|+. ++|..+.+|++... ..+.|..
T Consensus 352 dgr~~~va~~~s----n~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~-----------g~~~Vsv 416 (567)
T 1qks_A 352 SHRYFITAANAR----NKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHM-----------GDDSVAL 416 (567)
T ss_dssp TSCEEEEEEGGG----TEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBS-----------SSSEEEE
T ss_pred CCCEEEEEeCCC----CeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCC-----------CCCeEEE
Confidence 134677777666 5788888775443333333 22 4 4665 57777777765432 1456666
Q ss_pred EeecCCC-----eEEE--eeCCCCCceeEEEecCCCeEEEEcCC------CCeEEEEEec
Q psy17325 352 IGMDGSN-----RSTI--ISTKIYWPNGLTLDIATRRVYFADSK------LDFIDFCNYD 398 (461)
Q Consensus 352 ~~~dG~~-----~~~l--~~~~l~~p~glaiD~~~~~ly~~d~~------~~~I~~~~~~ 398 (461)
.+.+... .+++ +...-..+..|++.+.+.+||+.... .+.|..++++
T Consensus 417 id~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~ 476 (567)
T 1qks_A 417 IGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIK 476 (567)
T ss_dssp EECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGG
T ss_pred ecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECC
Confidence 6665411 1222 11222345668888788888887643 3589999984
No 155
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.51 E-value=0.00011 Score=72.80 Aligned_cols=209 Identities=9% Similarity=0.068 Sum_probs=138.1
Q ss_pred cceeeeeeeecCCeEEEEeCCC--CeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeec-CCCCcEEEEecC
Q psy17325 149 DLVEGLAYDWIGGHIYWLDSRL--NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW-GENPRIERIGMD 225 (461)
Q Consensus 149 ~~p~~iavd~~~~~ly~~d~~~--~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~-~~~~~I~~~~~d 225 (461)
..+..+++.+.++.|+++.... ..|.+.++.+.....+.... .....+++.|... +|+++.. .....|+..++.
T Consensus 179 ~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~-~~~~~~~~spdg~--~la~~~~~~g~~~i~~~d~~ 255 (415)
T 2hqs_A 179 QPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFP-RHNGAPAFSPDGS--KLAFALSKTGSLNLYVMDLA 255 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCS-SCEEEEEECTTSS--EEEEEECTTSSCEEEEEETT
T ss_pred CcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCC-CcccCEEEcCCCC--EEEEEEecCCCceEEEEECC
Confidence 3566788888888888877543 58999998766655554322 4578899999866 7886642 223579999988
Q ss_pred CCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCc
Q psy17325 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305 (461)
Q Consensus 226 G~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~ 305 (461)
+.....+.. .-.....+++.+.++.|+++...... ..|++.++++..
T Consensus 256 ~~~~~~l~~-~~~~~~~~~~spdg~~l~~~s~~~g~--------------------------------~~i~~~d~~~~~ 302 (415)
T 2hqs_A 256 SGQIRQVTD-GRSNNTEPTWFPDSQNLAFTSDQAGR--------------------------------PQVYKVNINGGA 302 (415)
T ss_dssp TCCEEECCC-CSSCEEEEEECTTSSEEEEEECTTSS--------------------------------CEEEEEETTSSC
T ss_pred CCCEEeCcC-CCCcccceEECCCCCEEEEEECCCCC--------------------------------cEEEEEECCCCC
Confidence 655443332 23456778888888888876543221 246777777665
Q ss_pred eEEEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEE
Q psy17325 306 ASILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYF 384 (461)
Q Consensus 306 ~~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~ 384 (461)
.+.+..... ...+++.|.++.|+++... .....|+..++++.....+. .. .....+++.+.+..|++
T Consensus 303 ~~~l~~~~~~~~~~~~spdG~~l~~~~~~----------~g~~~i~~~d~~~~~~~~l~-~~-~~~~~~~~spdg~~l~~ 370 (415)
T 2hqs_A 303 PQRITWEGSQNQDADVSSDGKFMVMVSSN----------GGQQHIAKQDLATGGVQVLS-ST-FLDETPSLAPNGTMVIY 370 (415)
T ss_dssp CEECCCSSSEEEEEEECTTSSEEEEEEEC----------SSCEEEEEEETTTCCEEECC-CS-SSCEEEEECTTSSEEEE
T ss_pred EEEEecCCCcccCeEECCCCCEEEEEECc----------CCceEEEEEECCCCCEEEec-CC-CCcCCeEEcCCCCEEEE
Confidence 444333222 6778999988888776542 11346888888776665444 22 37888999988888888
Q ss_pred EcCCCC--eEEEEEecCCCCeEEEE
Q psy17325 385 ADSKLD--FIDFCNYDGTGRQQVIL 407 (461)
Q Consensus 385 ~d~~~~--~I~~~~~~g~g~~~~~~ 407 (461)
+....+ .|+.+++ +|.....+
T Consensus 371 ~s~~~~~~~l~~~d~--~g~~~~~l 393 (415)
T 2hqs_A 371 SSSQGMGSVLNLVST--DGRFKARL 393 (415)
T ss_dssp EEEETTEEEEEEEET--TSCCEEEC
T ss_pred EEcCCCccEEEEEEC--CCCcEEEe
Confidence 755444 7899998 56654433
No 156
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.51 E-value=3.3e-05 Score=76.75 Aligned_cols=181 Identities=11% Similarity=0.113 Sum_probs=121.3
Q ss_pred CeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecC-CCCcEEEEecCCCCcEEEEecccccceeEEeeccC
Q psy17325 171 NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 249 (461)
Q Consensus 171 ~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~-~~~~I~~~~~dG~~~~~i~~~~~~~P~glavD~~~ 249 (461)
++|.+.+++|.....+.... .....+++.|... +|+++... ....|+..++.+.....+.. .-.....+++.+.+
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~-~~v~~~~~Spdg~--~la~~s~~~~~~~i~~~d~~tg~~~~l~~-~~~~~~~~~~spdg 234 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSP-QPLMSPAWSPDGS--KLAYVTFESGRSALVIQTLANGAVRQVAS-FPRHNGAPAFSPDG 234 (415)
T ss_dssp EEEEEEETTSCSCEEEEEES-SCEEEEEECTTSS--EEEEEECTTSSCEEEEEETTTCCEEEEEC-CSSCEEEEEECTTS
T ss_pred ceEEEEcCCCCCCEEEeCCC-CcceeeEEcCCCC--EEEEEEecCCCcEEEEEECCCCcEEEeec-CCCcccCEEEcCCC
Confidence 68999999988766665432 4578899999866 77777632 23689999998665554432 23456789999988
Q ss_pred CeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCe-eeeEEEeccCCeEE
Q psy17325 250 RRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL-YEALALDLENGMLY 328 (461)
Q Consensus 250 ~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~-p~~iavd~~~~~lY 328 (461)
+.|+++....+. ..|++.++.+.....+..... ...+++.|.+..|+
T Consensus 235 ~~la~~~~~~g~--------------------------------~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~ 282 (415)
T 2hqs_A 235 SKLAFALSKTGS--------------------------------LNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLA 282 (415)
T ss_dssp SEEEEEECTTSS--------------------------------CEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEE
T ss_pred CEEEEEEecCCC--------------------------------ceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEE
Confidence 888876543221 246667776555444433222 67788888887777
Q ss_pred EeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCC--CCeEEEEEec
Q psy17325 329 YSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK--LDFIDFCNYD 398 (461)
Q Consensus 329 ~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~--~~~I~~~~~~ 398 (461)
++... ....+|+..++++...+.+. ........+++.++++.|+++... ...|...+++
T Consensus 283 ~~s~~----------~g~~~i~~~d~~~~~~~~l~-~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~ 343 (415)
T 2hqs_A 283 FTSDQ----------AGRPQVYKVNINGGAPQRIT-WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLA 343 (415)
T ss_dssp EEECT----------TSSCEEEEEETTSSCCEECC-CSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETT
T ss_pred EEECC----------CCCcEEEEEECCCCCEEEEe-cCCCcccCeEECCCCCEEEEEECcCCceEEEEEECC
Confidence 65432 22457888888776655443 333456788999888889887554 4589999983
No 157
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=98.50 E-value=3.9e-08 Score=67.07 Aligned_cols=42 Identities=29% Similarity=0.556 Sum_probs=35.3
Q ss_pred ccCCCCCCCCCceeCCC-CceEeCCCCCeecCCCCceecCcce
Q psy17325 33 CKHKFGLCSNTCHPTPL-GALCTCPPGEILSNDSVTCQDMNEC 74 (461)
Q Consensus 33 C~~~~~~C~~~C~~~~~-~~~C~C~~G~~l~~~~~~C~d~~eC 74 (461)
|..+++.|++.|.++++ +|.|.|++||.|..++++|.+++||
T Consensus 2 C~~~nggC~~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec 44 (53)
T 2bz6_L 2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEY 44 (53)
T ss_dssp TTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEECSSS
T ss_pred CcCCCCCcCCEeEcCCCCCEEeeCCCCCEECCCCCcccCCccc
Confidence 55567778888988888 6889999999888888899988887
No 158
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.45 E-value=3e-05 Score=72.57 Aligned_cols=183 Identities=10% Similarity=0.017 Sum_probs=122.8
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCc
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~ 229 (461)
.+..+++++ .++++++ ..+.|...+++|+..-.+-...-..+.+.++.+. | .+++++.+.+.+|..++.+|+..
T Consensus 38 ~~~~~~~~p-dG~ilvs--~~~~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~d-G--~~lv~~~~~~~~v~~vd~~Gk~l 111 (276)
T 3no2_A 38 ECNSVAATK-AGEILFS--YSKGAKMITRDGRELWNIAAPAGCEMQTARILPD-G--NALVAWCGHPSTILEVNMKGEVL 111 (276)
T ss_dssp CCCEEEECT-TSCEEEE--CBSEEEEECTTSCEEEEEECCTTCEEEEEEECTT-S--CEEEEEESTTEEEEEECTTSCEE
T ss_pred CCcCeEECC-CCCEEEe--CCCCEEEECCCCCEEEEEcCCCCccccccEECCC-C--CEEEEecCCCCEEEEEeCCCCEE
Confidence 466677775 5567774 4678999999888766554322124566777775 4 47777744367888888888765
Q ss_pred EEEEec-----ccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCC
Q psy17325 230 STIIST-----KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304 (461)
Q Consensus 230 ~~i~~~-----~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~ 304 (461)
..+... ....|.+++++. ++++++++... ++|...+++|+
T Consensus 112 ~~~~~~~~~~~~~~~~~~v~~~~-~G~~lv~~~~~----------------------------------~~v~~~d~~G~ 156 (276)
T 3no2_A 112 SKTEFETGIERPHAQFRQINKNK-KGNYLVPLFAT----------------------------------SEVREIAPNGQ 156 (276)
T ss_dssp EEEEECCSCSSGGGSCSCCEECT-TSCEEEEETTT----------------------------------TEEEEECTTSC
T ss_pred EEEeccCCCCcccccccCceECC-CCCEEEEecCC----------------------------------CEEEEECCCCC
Confidence 444321 123577788876 56666777655 35777788876
Q ss_pred ceEEEEeCCeeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeec-CCCeEEEeeC-----CCCCceeEEEecC
Q psy17325 305 NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD-GSNRSTIIST-----KIYWPNGLTLDIA 378 (461)
Q Consensus 305 ~~~~l~~~~~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~d-G~~~~~l~~~-----~l~~p~glaiD~~ 378 (461)
....+-....|.++++.+ +|.+++++.. +++|...+.+ |+..-.+... .+..|.+++++ .
T Consensus 157 ~~w~~~~~~~~~~~~~~~-~g~~~v~~~~------------~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~-~ 222 (276)
T 3no2_A 157 LLNSVKLSGTPFSSAFLD-NGDCLVACGD------------AHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPL-Q 222 (276)
T ss_dssp EEEEEECSSCCCEEEECT-TSCEEEECBT------------TSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEEC-T
T ss_pred EEEEEECCCCccceeEcC-CCCEEEEeCC------------CCeEEEEeCcCCcEEEEecCCCCCCccccccccceEc-C
Confidence 655544433488888875 5677777665 5678888877 7765555422 35679999998 6
Q ss_pred CCeEEEEcC
Q psy17325 379 TRRVYFADS 387 (461)
Q Consensus 379 ~~~ly~~d~ 387 (461)
++++|+++.
T Consensus 223 ~G~i~v~~~ 231 (276)
T 3no2_A 223 NGGLYICNW 231 (276)
T ss_dssp TSCEEEEEE
T ss_pred CCCEEEEec
Confidence 899999985
No 159
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=98.43 E-value=1.3e-07 Score=63.89 Aligned_cols=40 Identities=33% Similarity=0.761 Sum_probs=36.1
Q ss_pred cCCcccCceeeccCCccccCCCCeeeeCCCCceeeccccc
Q psy17325 76 QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA 115 (461)
Q Consensus 76 ~~~~C~~~C~~~~g~~~C~C~~g~~l~~~~~~C~~~~~~~ 115 (461)
.++.|+|.|.|++|+|.|.|++||.|..++++|.++++++
T Consensus 4 ~ng~C~~~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~p 43 (51)
T 1kig_L 4 DNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVSTERFP 43 (51)
T ss_dssp TTTSSSSCCCEETTEECCCCCTTEEECTTSSCEEECSSSC
T ss_pred CCCCcCCEeEcCCCCeEEeCCCCcEECCCCCccccCCccc
Confidence 3567999999999999999999999999999999988753
No 160
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.41 E-value=6.3e-05 Score=69.42 Aligned_cols=185 Identities=11% Similarity=0.045 Sum_probs=116.5
Q ss_pred CCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCC-CCcEEEEecc-cccceeEEeec
Q psy17325 170 LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG-SNRSTIISTK-IYWPNGLTLDI 247 (461)
Q Consensus 170 ~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG-~~~~~i~~~~-~~~P~glavD~ 247 (461)
.+.|.+.++.+.....+... -..+.++++.|... +|+++. ...|...++++ .....+.... ...+..+++.+
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~-~~~v~~~~~spdg~--~l~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQT-PELFEAPNWSPDGK--YLLLNS---EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEE-SSCCEEEEECTTSS--EEEEEE---TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT
T ss_pred ceeEEEEeCCCCceeeeccC-CcceEeeEECCCCC--EEEEEc---CCeEEEEeCCCCCCceEeccccccccccceEECC
Confidence 45666677665554444432 24578999999866 777765 35899999987 5554444322 24567799998
Q ss_pred cCCeeEEecCCCc-eeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCeeeeEEEeccCCe
Q psy17325 248 ATRRVYFADSKLD-FIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDLENGM 326 (461)
Q Consensus 248 ~~~~ly~~d~~~~-~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~p~~iavd~~~~~ 326 (461)
.++.|+++....+ . ..|+..++++.....+.....+..+++.|.+..
T Consensus 95 dg~~l~~~~~~~~~~--------------------------------~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 142 (297)
T 2ojh_A 95 DGALYAISDKVEFGK--------------------------------SAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKS 142 (297)
T ss_dssp TSSEEEEEECTTTSS--------------------------------CEEEEEETTCCCCEECCSSSSEEEEEECTTSSE
T ss_pred CCCEEEEEEeCCCCc--------------------------------ceEEEEECCCCceEEeecCCCccceEECCCCCE
Confidence 8888888763321 1 246667766655544433323677889988887
Q ss_pred EEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEc--CCCCeEEEEEecCCCCeE
Q psy17325 327 LYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD--SKLDFIDFCNYDGTGRQQ 404 (461)
Q Consensus 327 lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d--~~~~~I~~~~~~g~g~~~ 404 (461)
|+++... ....+|+.+++++.....+. ..-..+..+++++.+..|+++. .+...|+.+++ ++...
T Consensus 143 l~~~~~~----------~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~--~~~~~ 209 (297)
T 2ojh_A 143 FTYCGIR----------DQVFDIYSMDIDSGVETRLT-HGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRV--DGSSV 209 (297)
T ss_dssp EEEEEEE----------TTEEEEEEEETTTCCEEECC-CSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET--TSSCE
T ss_pred EEEEECC----------CCceEEEEEECCCCcceEcc-cCCCccccceECCCCCEEEEEecCCCCccEEEECC--CCCCc
Confidence 7765433 11225666666665554444 4445678899998888888774 34556777776 44443
Q ss_pred E
Q psy17325 405 V 405 (461)
Q Consensus 405 ~ 405 (461)
.
T Consensus 210 ~ 210 (297)
T 2ojh_A 210 E 210 (297)
T ss_dssp E
T ss_pred E
Confidence 3
No 161
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.38 E-value=0.00031 Score=67.15 Aligned_cols=154 Identities=18% Similarity=0.240 Sum_probs=96.4
Q ss_pred eEEEEeCC--CCeEEEEeCC--CCcEEEEe------cCCCCCceeEEE--cCCCCceEEEEeecCCCCcEEEEec----C
Q psy17325 162 HIYWLDSR--LNRIEVCDEN--GTNRIVLA------KDNITQPRGMML--DPSPGTRWLFWTDWGENPRIERIGM----D 225 (461)
Q Consensus 162 ~ly~~d~~--~~~I~~~~~~--G~~~~~l~------~~~~~~p~~ia~--d~~~g~~~ly~td~~~~~~I~~~~~----d 225 (461)
.+|.++.. .++|.+++++ ....+.+. ...+..|.||++ ++..++.++|+++ . ...+....+ +
T Consensus 88 la~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~-k-~G~~~q~~l~~~~~ 165 (355)
T 3amr_A 88 IAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTG-K-EGEFEQYELKADKN 165 (355)
T ss_dssp EEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEEC-S-SSEEEEEEEEECTT
T ss_pred EEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEEC-C-CCeEEEEEEEeCCC
Confidence 47999988 8999888665 22333331 144578999999 8877744688887 3 356666444 2
Q ss_pred CCCcEEEEec--ccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCC-
Q psy17325 226 GSNRSTIIST--KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMD- 302 (461)
Q Consensus 226 G~~~~~i~~~--~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~- 302 (461)
|+....++.+ --..|.|+++|...++||+++...+ |.+...+
T Consensus 166 g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~G-----------------------------------Iw~~da~p 210 (355)
T 3amr_A 166 GYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEA-----------------------------------IWKFSAEP 210 (355)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTE-----------------------------------EEEEECST
T ss_pred CcccceEEEEecCCCCcceEEEcCCCCeEEEecccce-----------------------------------EEEEeCCc
Confidence 3222233322 1247999999999999999999862 6666644
Q ss_pred -CC-ceEEEEe---CCe---eeeEEEeccC---CeEEEeecCceeeEEEeecCCCCceEEE
Q psy17325 303 -GS-NASILVS---GQL---YEALALDLEN---GMLYYSTLKCTRWLFWTDWGENPRIERI 352 (461)
Q Consensus 303 -g~-~~~~l~~---~~~---p~~iavd~~~---~~lY~t~~~~~~~l~~~d~~~~~~I~~~ 352 (461)
+. .++++.. ..+ ++||++.+.. ++|++|+.+...|..|---+...-+-++
T Consensus 211 ~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 211 DGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp TSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred CCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 32 2333322 222 9999997544 5899998875556655332233334444
No 162
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=98.37 E-value=3.8e-07 Score=75.77 Aligned_cols=78 Identities=29% Similarity=0.684 Sum_probs=60.5
Q ss_pred CCCcccCCCCCCCC--CceeCCCCceEeCCCCCeecCCCCcee-cCcceecCCccc--CceeeccCCccccCCCCeeeeC
Q psy17325 29 DLAECKHKFGLCSN--TCHPTPLGALCTCPPGEILSNDSVTCQ-DMNECEQPGYCS--QMCTNTKGSYICSCNEGYVLEY 103 (461)
Q Consensus 29 ~~~~C~~~~~~C~~--~C~~~~~~~~C~C~~G~~l~~~~~~C~-d~~eC~~~~~C~--~~C~~~~g~~~C~C~~g~~l~~ 103 (461)
+++||......|.+ .|++..++|.|.|++||. +..|+ ++++|.. ..|. ..|.+..++|.|.|++||.
T Consensus 4 dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~----G~~C~~~~~~C~~-~~C~~~~~C~~~~g~~~C~C~~G~~--- 75 (135)
T 2vj3_A 4 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYT----GPRCEIDVNECVS-NPCQNDATCLDQIGEFQCICMPGYE--- 75 (135)
T ss_dssp CCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEE----STTSCEECCTTTT-CCCCSSCEEEECSSCEEEECCTTEE---
T ss_pred ccccccCCCCCCCCCCEeECCCCCEEEECCCCCc----CCcccccCccCCC-CCCCCCCEEeCCCCCceeeCCCCCc---
Confidence 46788765566765 799999999999999996 56785 8899963 4564 4899999999999999996
Q ss_pred CCCcee-eccccc
Q psy17325 104 DNHTCK-AINHSA 115 (461)
Q Consensus 104 ~~~~C~-~~~~~~ 115 (461)
+..|. +++++.
T Consensus 76 -G~~C~~~~~~C~ 87 (135)
T 2vj3_A 76 -GVHCEVNTDECA 87 (135)
T ss_dssp -SSSSCEECCTTT
T ss_pred -CCcceecCCccc
Confidence 45563 455543
No 163
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=98.36 E-value=2e-07 Score=63.50 Aligned_cols=40 Identities=33% Similarity=0.735 Sum_probs=36.1
Q ss_pred cCCcccCceeeccC-CccccCCCCeeeeCCCCceeeccccc
Q psy17325 76 QPGYCSQMCTNTKG-SYICSCNEGYVLEYDNHTCKAINHSA 115 (461)
Q Consensus 76 ~~~~C~~~C~~~~g-~~~C~C~~g~~l~~~~~~C~~~~~~~ 115 (461)
.++.|+|.|.|+++ +|.|.|++||.|..++++|.++++++
T Consensus 5 ~nggC~~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec~ 45 (53)
T 2bz6_L 5 ENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 45 (53)
T ss_dssp GGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred CCCCcCCEeEcCCCCCEEeeCCCCCEECCCCCcccCCcccc
Confidence 35689999999999 79999999999999999999998764
No 164
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.33 E-value=2.6e-07 Score=71.00 Aligned_cols=75 Identities=17% Similarity=0.512 Sum_probs=58.3
Q ss_pred CCCCCCCCCCCCCCCcccCCCCCCCCCceeCCCCceEeCCCCCeecCCCCcee--cCcceecCCccc--Cceeecc--CC
Q psy17325 17 DCPNGADEGPGCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ--DMNECEQPGYCS--QMCTNTK--GS 90 (461)
Q Consensus 17 dC~dg~de~~~C~~~~C~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~--d~~eC~~~~~C~--~~C~~~~--g~ 90 (461)
.|.+|+- +..|++++|...+ |.+..++|.|.|++||. .|+ ++++|.. ..|. ..|.+.. ++
T Consensus 5 ~C~~g~~-g~~c~~~~c~~~p------C~n~~~~y~C~C~~G~~------~C~~~~~~~C~~-~pC~ngg~C~~~~~~~~ 70 (91)
T 1tpg_A 5 ICRDEKT-QMIYQQHQSWLRP------VLRSNRVEYCWCNSGRA------QCHSVPVKSCSE-PRCFNGGTCQQALYFSD 70 (91)
T ss_dssp CCBCSSS-CCBCCSSCEEEEE------CSSSSCEEEEECSSSCC------BCCEECEEECSS-CCSCTTCEEEEESSSSC
T ss_pred ECCCCCc-CCeECCCcccCCc------cccCCCCcEeECCCCCc------ccccCcCCcccC-CCCCCCCEeecCCCCCC
Confidence 4888874 4678888886443 56678899999999994 786 7899963 4575 3799987 99
Q ss_pred ccccCCCCeeeeCCCCcee
Q psy17325 91 YICSCNEGYVLEYDNHTCK 109 (461)
Q Consensus 91 ~~C~C~~g~~l~~~~~~C~ 109 (461)
|.|.|++||. ++.|.
T Consensus 71 ~~C~C~~G~~----G~~Ce 85 (91)
T 1tpg_A 71 FVCQCPEGFA----GKSCE 85 (91)
T ss_dssp EEEECCTTCB----SSSCC
T ss_pred eEeECCCCCc----CCcCC
Confidence 9999999994 66774
No 165
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.29 E-value=6.8e-07 Score=75.04 Aligned_cols=66 Identities=32% Similarity=0.770 Sum_probs=51.1
Q ss_pred CCcccCCCCCCCCCce-------eCCCCceEeCCCCCeecCCCCcee-cCcceecCCccc--CceeeccCCccccCCCCe
Q psy17325 30 LAECKHKFGLCSNTCH-------PTPLGALCTCPPGEILSNDSVTCQ-DMNECEQPGYCS--QMCTNTKGSYICSCNEGY 99 (461)
Q Consensus 30 ~~~C~~~~~~C~~~C~-------~~~~~~~C~C~~G~~l~~~~~~C~-d~~eC~~~~~C~--~~C~~~~g~~~C~C~~g~ 99 (461)
.++|..++......|. +.+++|.|.|++||. +..|+ ++++|. ...|. ..|.+..++|.|.|++||
T Consensus 52 ~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~----G~~C~~~i~~C~-~~~C~~~~~C~~~~g~~~C~C~~G~ 126 (143)
T 4d90_A 52 AGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFN----GIHCQHNINECE-VEPCKNGGICTDLVANYSCECPGEF 126 (143)
T ss_dssp CCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEE----STTSCEECCTTT-TCCSCTTCEEEEETTEEEEECCTTC
T ss_pred CCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCc----CCCcccCCCcCC-CCCCCCCCEeECCCCCeEeECCCCC
Confidence 3566554433334688 566899999999995 78897 999996 34564 589999999999999999
Q ss_pred e
Q psy17325 100 V 100 (461)
Q Consensus 100 ~ 100 (461)
.
T Consensus 127 ~ 127 (143)
T 4d90_A 127 M 127 (143)
T ss_dssp B
T ss_pred c
Confidence 5
No 166
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.29 E-value=2.4e-05 Score=81.13 Aligned_cols=197 Identities=9% Similarity=-0.022 Sum_probs=123.7
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeec-C--CCCcEEEEec--C
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDW-G--ENPRIERIGM--D 225 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~-~--~~~~I~~~~~--d 225 (461)
...+++.+.++.|.++....+.+.+..++|...+.+.........++++.|. . .+|+++. + ....|+.+++ +
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~--~l~~~~~~~g~~~~~l~~~~~~~~ 100 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-R--VILVRDVSKGAEQHALFKVNTSRP 100 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-E--EEEEEECSTTSCCEEEEEEETTST
T ss_pred hheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-e--EEEEeccCCCCcceEEEEEeccCC
Confidence 4567777778888877655677777777777766665433234567777776 5 8999884 1 2357888988 7
Q ss_pred CCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCc
Q psy17325 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305 (461)
Q Consensus 226 G~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~ 305 (461)
|... .+. .......+++.+..+.++++....+. +...++++..
T Consensus 101 g~~~-~l~--~~~~~~~~~~s~dg~~~~~~s~~~~~----------------------------------~~l~d~~~g~ 143 (582)
T 3o4h_A 101 GEEQ-RLE--AVKPMRILSGVDTGEAVVFTGATEDR----------------------------------VALYALDGGG 143 (582)
T ss_dssp TCCE-ECT--TSCSBEEEEEEECSSCEEEEEECSSC----------------------------------EEEEEEETTE
T ss_pred Cccc-ccc--CCCCceeeeeCCCCCeEEEEecCCCC----------------------------------ceEEEccCCc
Confidence 7655 221 12233345666667666665443322 2233555554
Q ss_pred eEEEEeCCeeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEE
Q psy17325 306 ASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385 (461)
Q Consensus 306 ~~~l~~~~~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~ 385 (461)
.+.+.... ...++++|.+..|+++... -+....|+..++++...+.+. ........+++.+++..|+.+
T Consensus 144 ~~~l~~~~-~~~~~~spDG~~la~~~~~---------~~~~~~i~~~d~~~g~~~~l~-~~~~~~~~~~~SpDG~~l~~~ 212 (582)
T 3o4h_A 144 LRELARLP-GFGFVSDIRGDLIAGLGFF---------GGGRVSLFTSNLSSGGLRVFD-SGEGSFSSASISPGMKVTAGL 212 (582)
T ss_dssp EEEEEEES-SCEEEEEEETTEEEEEEEE---------ETTEEEEEEEETTTCCCEEEC-CSSCEEEEEEECTTSCEEEEE
T ss_pred EEEeecCC-CceEEECCCCCEEEEEEEc---------CCCCeEEEEEcCCCCCceEee-cCCCccccceECCCCCEEEEc
Confidence 44444322 2678899988888765322 112256888888776666665 444556889999888889865
Q ss_pred cCCC-CeEEEEEec
Q psy17325 386 DSKL-DFIDFCNYD 398 (461)
Q Consensus 386 d~~~-~~I~~~~~~ 398 (461)
+... ..|+..+++
T Consensus 213 ~~~~~~~i~~~d~~ 226 (582)
T 3o4h_A 213 ETAREARLVTVDPR 226 (582)
T ss_dssp ECSSCEEEEEECTT
T ss_pred cCCCeeEEEEEcCC
Confidence 5432 389999993
No 167
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=98.25 E-value=4.7e-07 Score=61.88 Aligned_cols=42 Identities=43% Similarity=1.041 Sum_probs=36.3
Q ss_pred ecCcceec---------CCcccCceeeccCCccccCCCCeeeeCCCCceee
Q psy17325 69 QDMNECEQ---------PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110 (461)
Q Consensus 69 ~d~~eC~~---------~~~C~~~C~~~~g~~~C~C~~g~~l~~~~~~C~~ 110 (461)
+|++||.. ...|.+.|.|++|+|.|.|++||.+..++++|.+
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~~ 52 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQA 52 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSSCEEC
T ss_pred CccccccCcccccccccCCCCCCEeECCCCCeEEECCCCCeECCCCCccCC
Confidence 46888874 2579999999999999999999999989999964
No 168
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.24 E-value=6.4e-07 Score=75.23 Aligned_cols=70 Identities=34% Similarity=0.743 Sum_probs=53.9
Q ss_pred CceeCCCCceEeCCCCCeec-----CCCCceecCcceecC--Cccc--CceeeccCCccccCCCCeeeeCC--------C
Q psy17325 43 TCHPTPLGALCTCPPGEILS-----NDSVTCQDMNECEQP--GYCS--QMCTNTKGSYICSCNEGYVLEYD--------N 105 (461)
Q Consensus 43 ~C~~~~~~~~C~C~~G~~l~-----~~~~~C~d~~eC~~~--~~C~--~~C~~~~g~~~C~C~~g~~l~~~--------~ 105 (461)
.|++ .|.|.|++||... .++..|++++||... ..|. +.|.++.++|.|.|++||.+... +
T Consensus 14 ~C~~---~~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~ 90 (143)
T 2bou_A 14 SCVN---ATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESE 90 (143)
T ss_dssp EESS---SSCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSSGGG
T ss_pred EEcC---CCEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCccccccCCC
Confidence 4554 3899999999853 345789999999854 2686 58999999999999999987643 3
Q ss_pred Cceeeccccc
Q psy17325 106 HTCKAINHSA 115 (461)
Q Consensus 106 ~~C~~~~~~~ 115 (461)
..|.+++++.
T Consensus 91 ~~C~dideC~ 100 (143)
T 2bou_A 91 NTCQDVDECS 100 (143)
T ss_dssp CCEEECCHHH
T ss_pred CCcCCccCcc
Confidence 4788887764
No 169
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.23 E-value=0.0037 Score=58.64 Aligned_cols=198 Identities=6% Similarity=-0.007 Sum_probs=120.8
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcE--EEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCC
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~--~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~ 227 (461)
.+..+++.+.+..|+ +-...+.|.+.+++.... ...+.........+++.|... .|+... ....|...++...
T Consensus 99 ~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~l~~~~--~dg~v~~~d~~~~ 173 (337)
T 1gxr_A 99 YIRSCKLLPDGCTLI-VGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSK--VCFSCC--SDGNIAVWDLHNQ 173 (337)
T ss_dssp BEEEEEECTTSSEEE-EEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSS--EEEEEE--TTSCEEEEETTTT
T ss_pred cEEEEEEcCCCCEEE-EEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCC--EEEEEe--CCCcEEEEeCCCC
Confidence 456677776554454 445568899999876652 222333334578899999766 666665 3467888887754
Q ss_pred CcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceE
Q psy17325 228 NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307 (461)
Q Consensus 228 ~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~ 307 (461)
.....+......+..+++.+.+..|+.+.... .|...++......
T Consensus 174 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----------------------------------~i~~~d~~~~~~~ 218 (337)
T 1gxr_A 174 TLVRQFQGHTDGASCIDISNDGTKLWTGGLDN-----------------------------------TVRSWDLREGRQL 218 (337)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTS-----------------------------------EEEEEETTTTEEE
T ss_pred ceeeeeecccCceEEEEECCCCCEEEEEecCC-----------------------------------cEEEEECCCCceE
Confidence 43333333345678899988766666554332 3555555544333
Q ss_pred EEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEc
Q psy17325 308 ILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 386 (461)
Q Consensus 308 ~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d 386 (461)
....... +..+++.|.+..|+.+.. .+.|...++.......+. ..-..+..+++.+.+..|+.+
T Consensus 219 ~~~~~~~~v~~~~~s~~~~~l~~~~~-------------~~~i~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~- 283 (337)
T 1gxr_A 219 QQHDFTSQIFSLGYCPTGEWLAVGME-------------SSNVEVLHVNKPDKYQLH-LHESCVLSLKFAYCGKWFVST- 283 (337)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEET-------------TSCEEEEETTSSCEEEEC-CCSSCEEEEEECTTSSEEEEE-
T ss_pred eeecCCCceEEEEECCCCCEEEEEcC-------------CCcEEEEECCCCCeEEEc-CCccceeEEEECCCCCEEEEe-
Confidence 3333222 788899988776665543 345666666655544443 445567889998665555554
Q ss_pred CCCCeEEEEEecCCCCe
Q psy17325 387 SKLDFIDFCNYDGTGRQ 403 (461)
Q Consensus 387 ~~~~~I~~~~~~g~g~~ 403 (461)
...+.|...++. ++..
T Consensus 284 ~~dg~i~~~~~~-~~~~ 299 (337)
T 1gxr_A 284 GKDNLLNAWRTP-YGAS 299 (337)
T ss_dssp ETTSEEEEEETT-TCCE
T ss_pred cCCCcEEEEECC-CCeE
Confidence 456789999983 4444
No 170
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.22 E-value=0.00046 Score=66.93 Aligned_cols=249 Identities=11% Similarity=0.031 Sum_probs=138.3
Q ss_pred eeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCc--eeEEEcCCCCceEEEEee------------------
Q psy17325 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQP--RGMMLDPSPGTRWLFWTD------------------ 212 (461)
Q Consensus 153 ~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p--~~ia~d~~~g~~~ly~td------------------ 212 (461)
++++.+.++.|+++.. ...|.+.++++...+.+........ ...++++... .+....
T Consensus 85 ~~~~spdg~~l~~~~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~--~l~~~~~~~~~~~~~~~~~~~~~~ 161 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKD-GRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCT--KLVGIEIRREDWVPLTDWKKFHEF 161 (388)
T ss_dssp SCEECTTSSEEEEEET-TTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSS--EEEEEEEEGGGCCCCCSHHHHHHH
T ss_pred ceEEcCCCCEEEEEeC-CCeEEEEECCCCcceeeeechhhcccccceeECCCCC--eeccccccCcccccccccchhhhh
Confidence 4577777888888875 3689999988776655544221111 1123455544 444221
Q ss_pred --cCCCCcEEEEecCCCCcEEEEecccccceeEEeec-cCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCC
Q psy17325 213 --WGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI-ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289 (461)
Q Consensus 213 --~~~~~~I~~~~~dG~~~~~i~~~~~~~P~glavD~-~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~ 289 (461)
......|++.++.+...+.+... ......+++.+ .+++|.++......
T Consensus 162 ~~~~~~~~l~~~d~~~g~~~~l~~~-~~~~~~~~~sp~dg~~l~~~~~~~~~---------------------------- 212 (388)
T 3pe7_A 162 YFTKPCCRLMRVDLKTGESTVILQE-NQWLGHPIYRPYDDSTVAFCHEGPHD---------------------------- 212 (388)
T ss_dssp GGGCCCEEEEEEETTTCCEEEEEEE-SSCEEEEEEETTEEEEEEEEECSCTT----------------------------
T ss_pred hccCCcceEEEEECCCCceEEeecC-CccccccEECCCCCCEEEEEEecCCC----------------------------
Confidence 12336789999887666555443 34567888888 77777665442100
Q ss_pred CCcceeeeEEeCCCCceEEEEeCC--e-eeeEEEeccCCeEEEeecCceeeEEEeecCCCC--ceEEEeecCCCeEEEee
Q psy17325 290 NGVPLKIGKANMDGSNASILVSGQ--L-YEALALDLENGMLYYSTLKCTRWLFWTDWGENP--RIERIGMDGSNRSTIIS 364 (461)
Q Consensus 290 ~~~~~~I~~~~~~g~~~~~l~~~~--~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~--~I~~~~~dG~~~~~l~~ 364 (461)
.....|+..+++|...+.+.... . ...+++.|.+..|++.... .... .|+..++++...+.+..
T Consensus 213 -~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~----------~~~~~~~l~~~d~~~g~~~~l~~ 281 (388)
T 3pe7_A 213 -LVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYL----------KGSPDRFIYSADPETLENRQLTS 281 (388)
T ss_dssp -TSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEE----------TTCCCEEEEEECTTTCCEEEEEE
T ss_pred -CCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecC----------CCCCcceEEEEecCCCceEEEEc
Confidence 00035777788777666655433 1 4456788877766543221 1122 38888887766555532
Q ss_pred CCC-----CCceeEEEecCCCeEEEEc--------CCCCeEEEEEecCCCCeEEEEEccccceeeccCCCC--CcceEEE
Q psy17325 365 TKI-----YWPNGLTLDIATRRVYFAD--------SKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDN--GVPALAL 429 (461)
Q Consensus 365 ~~l-----~~p~glaiD~~~~~ly~~d--------~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~l 429 (461)
..- ..|.++++.+++++|+++- .....|+.+++ ++.....+........ .+.+.. .....++
T Consensus 282 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~--~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~ 358 (388)
T 3pe7_A 282 MPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNM--KNGTQHRVARHDTSWK-VFEGDRQVTHPHPSF 358 (388)
T ss_dssp ECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEET--TTTEEEEEEECCCCCC-CBTTBSSTTCCCCEE
T ss_pred CCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEec--cCCceEEeccccCccc-ccccccccCCCCccC
Confidence 111 1266677887888888753 45668999999 4444333332221000 000000 0123466
Q ss_pred eeeCCEEEEEeCCCceee
Q psy17325 430 DLENGMLYYSTEGAEFLK 447 (461)
Q Consensus 430 ~~~~~~lYwtd~~~~~i~ 447 (461)
+.++..||++....+...
T Consensus 359 spDg~~l~~~s~~~g~~~ 376 (388)
T 3pe7_A 359 TPDDKQILFTSDVHGKPA 376 (388)
T ss_dssp CTTSSEEEEEECTTSSCE
T ss_pred CCCCCEEEEEecCCCcee
Confidence 777888998876665443
No 171
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.17 E-value=4.6e-07 Score=79.77 Aligned_cols=76 Identities=28% Similarity=0.751 Sum_probs=59.9
Q ss_pred CCCCcccCCCCCCC--CCce----eCCCCceEeCCCCCeecC-CCCceecC--cceecCCcc---cCceeeccCCccccC
Q psy17325 28 CDLAECKHKFGLCS--NTCH----PTPLGALCTCPPGEILSN-DSVTCQDM--NECEQPGYC---SQMCTNTKGSYICSC 95 (461)
Q Consensus 28 C~~~~C~~~~~~C~--~~C~----~~~~~~~C~C~~G~~l~~-~~~~C~d~--~eC~~~~~C---~~~C~~~~g~~~C~C 95 (461)
|.+++|...+ |. ..|. +..++|.|.|++||.+.. ++..|+++ ++|. ..| .+.|+++.++|.|.|
T Consensus 89 C~~d~C~~~~--C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~--~~C~~~~~~C~n~~g~y~C~C 164 (186)
T 1z1y_A 89 CVLDVCQYXN--CGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQ--LXCNTDNEVCXNVEGVYXCQC 164 (186)
T ss_dssp EEEGGGTTCC--CCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCC--CCCCTTTEEEEEETTEEEEEE
T ss_pred CCCCcCcCCC--CCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCccc--ccccccCcceecCCCCeeeEC
Confidence 4567887654 54 4577 788899999999998754 67899986 7896 378 358999999999999
Q ss_pred CCCeeeeCCCCc
Q psy17325 96 NEGYVLEYDNHT 107 (461)
Q Consensus 96 ~~g~~l~~~~~~ 107 (461)
++||........
T Consensus 165 ~~G~~g~~~~~~ 176 (186)
T 1z1y_A 165 MEGFTFDXEXNV 176 (186)
T ss_dssp CTTCEEETTTTE
T ss_pred CCCCccCccccc
Confidence 999988765443
No 172
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=98.15 E-value=1.2e-06 Score=61.03 Aligned_cols=38 Identities=34% Similarity=0.853 Sum_probs=34.0
Q ss_pred cCCcccCceeecc-CCccccCCCCeeeeCCCCceeeccc
Q psy17325 76 QPGYCSQMCTNTK-GSYICSCNEGYVLEYDNHTCKAINH 113 (461)
Q Consensus 76 ~~~~C~~~C~~~~-g~~~C~C~~g~~l~~~~~~C~~~~~ 113 (461)
.++.|+|.|.+++ |+|.|.|++||.|..|+++|.++++
T Consensus 5 ~nggC~~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~~ 43 (59)
T 2wph_E 5 KNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVP 43 (59)
T ss_dssp GGGGCSSEEEECSTTCEEEECCTTEEECTTSSCEEESSS
T ss_pred CCCCcCCEeEeCCCCCEEeeCCCCcEECCCCCcccCCCC
Confidence 3568999999999 6999999999999999999988654
No 173
>3dpr_E LDL-receptor class A 3; human rhinovirus, VLDL-receptor, virus-protein complex, icosahedral virus, ATP-binding, capsid protein; HET: DAO; 3.50A {Homo sapiens} PDB: 1v9u_5*
Probab=98.13 E-value=1.4e-06 Score=54.95 Aligned_cols=26 Identities=38% Similarity=1.041 Sum_probs=23.5
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCCCCC
Q psy17325 2 ADRCVNLTKVCDGKTDCPNGADEGPGC 28 (461)
Q Consensus 2 ~~~Ci~~~~~Cd~~~dC~dg~de~~~C 28 (461)
+++||+.+|+|||..||.||+|| ..|
T Consensus 12 ~g~Cip~~~~CDg~~DC~dgsDE-~~C 37 (39)
T 3dpr_E 12 STQCIPVSWRCDGENDCDSGEDE-ENC 37 (39)
T ss_dssp SSCCCCTTSSSSSSCCSTTTTTS-TTC
T ss_pred CCCEeCccccCCCcccCcCCccc-ccC
Confidence 37999999999999999999999 455
No 174
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=98.12 E-value=1.9e-06 Score=58.77 Aligned_cols=42 Identities=38% Similarity=0.807 Sum_probs=34.7
Q ss_pred CCCcccCC--------CCCCCCCceeCCCCceEeCCCCCeecCCCCceec
Q psy17325 29 DLAECKHK--------FGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQD 70 (461)
Q Consensus 29 ~~~~C~~~--------~~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~d 70 (461)
+++||... +..|.+.|.+++++|.|.|++||.+..++++|.+
T Consensus 3 DidEC~~~~~~~~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~~ 52 (53)
T 1apq_A 3 DLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQA 52 (53)
T ss_dssp SCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSSCEEC
T ss_pred ccccccCcccccccccCCCCCCEeECCCCCeEEECCCCCeECCCCCccCC
Confidence 35677653 3578899999999999999999999888888864
No 175
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.10 E-value=2.7e-06 Score=74.82 Aligned_cols=73 Identities=29% Similarity=0.659 Sum_probs=57.8
Q ss_pred CCCC-CceeCCCCceEeCCCCCeecCCCCceecCcceec---CCccc--Cceeecc-----CCccccCCCCeeeeCCCCc
Q psy17325 39 LCSN-TCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQ---PGYCS--QMCTNTK-----GSYICSCNEGYVLEYDNHT 107 (461)
Q Consensus 39 ~C~~-~C~~~~~~~~C~C~~G~~l~~~~~~C~d~~eC~~---~~~C~--~~C~~~~-----g~~~C~C~~g~~l~~~~~~ 107 (461)
.|.+ .|++++++|.|.|++||... ++..|+++++|.. ...|. ..|.++. ++|.|.|++||.... ..
T Consensus 12 pC~ng~C~~~~g~~~C~C~~G~~g~-~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~--~~ 88 (186)
T 1z1y_A 12 ICXNGQLVQMSNHFXCMCNEGLVHL-SENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXE--DT 88 (186)
T ss_dssp CCBTEEEEECSSCEEEEECTTEEEE-ETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEET--TE
T ss_pred CCCCCEeECCCCCeEeECCCCCccC-CCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCC--CC
Confidence 3433 69999999999999999864 4678999999973 45786 4899999 899999999998763 25
Q ss_pred eeeccccc
Q psy17325 108 CKAINHSA 115 (461)
Q Consensus 108 C~~~~~~~ 115 (461)
|. ++++.
T Consensus 89 C~-~d~C~ 95 (186)
T 1z1y_A 89 CV-LDVCQ 95 (186)
T ss_dssp EE-EGGGT
T ss_pred CC-CCcCc
Confidence 64 55554
No 176
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.07 E-value=0.00045 Score=73.51 Aligned_cols=214 Identities=9% Similarity=0.048 Sum_probs=129.9
Q ss_pred ceeeeeeeecCCeEEEEeCCCC-----eEEEEeCCCCcEEEEecCCCC------------------------CceeEEEc
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLN-----RIEVCDENGTNRIVLAKDNIT------------------------QPRGMMLD 200 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~-----~I~~~~~~G~~~~~l~~~~~~------------------------~p~~ia~d 200 (461)
.+..+++.+.++.|+++....+ .|.+.++++.....+...... ....+++.
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~S 117 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWS 117 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEEC
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEEC
Confidence 4667888888888888877445 899999887665555432111 14678999
Q ss_pred CCCCceEEEEeecCCCCcEEEEecCCC---CcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccce
Q psy17325 201 PSPGTRWLFWTDWGENPRIERIGMDGS---NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYST 277 (461)
Q Consensus 201 ~~~g~~~ly~td~~~~~~I~~~~~dG~---~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~ 277 (461)
|... +|+++. . ..|+..++++. ....+.. .-..+..+++.+.+++|+++...
T Consensus 118 pDg~--~l~~~~-~--~~i~~~d~~~~~~~~~~~l~~-~~~~~~~~~~SPDG~~la~~~~~------------------- 172 (741)
T 2ecf_A 118 PDAQ--RLLFPL-G--GELYLYDLKQEGKAAVRQLTH-GEGFATDAKLSPKGGFVSFIRGR------------------- 172 (741)
T ss_dssp TTSS--EEEEEE-T--TEEEEEESSSCSTTSCCBCCC-SSSCEEEEEECTTSSEEEEEETT-------------------
T ss_pred CCCC--EEEEEe-C--CcEEEEECCCCCcceEEEccc-CCcccccccCCCCCCEEEEEeCC-------------------
Confidence 9866 888876 2 68999999876 4433332 23457789999988888877532
Q ss_pred eeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCe------------------eeeEEEeccCCeEEEeecCce----
Q psy17325 278 IFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL------------------YEALALDLENGMLYYSTLKCT---- 335 (461)
Q Consensus 278 ~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~------------------p~~iavd~~~~~lY~t~~~~~---- 335 (461)
.|++.++++.....+..... +.++++.|.+..|+++.....
T Consensus 173 -----------------~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~ 235 (741)
T 2ecf_A 173 -----------------NLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPV 235 (741)
T ss_dssp -----------------EEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCE
T ss_pred -----------------cEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCce
Confidence 24444554433322221111 367899998888888643210
Q ss_pred -------------eeEEEeecCCC---CceEEEeecC-CCeEEEeeC--CCCCceeEEEecCCCeEEEEcC----CCCeE
Q psy17325 336 -------------RWLFWTDWGEN---PRIERIGMDG-SNRSTIIST--KIYWPNGLTLDIATRRVYFADS----KLDFI 392 (461)
Q Consensus 336 -------------~~l~~~d~~~~---~~I~~~~~dG-~~~~~l~~~--~l~~p~glaiD~~~~~ly~~d~----~~~~I 392 (461)
..+.|...+.. .+|+..++++ .....+... .-..+..+++ +++.+|+++.. ....|
T Consensus 236 ~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i 314 (741)
T 2ecf_A 236 QKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDL 314 (741)
T ss_dssp EEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEE
T ss_pred EecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEE
Confidence 01111111111 1566667766 554444311 2334677899 88888987643 24578
Q ss_pred EEEEecCCCCeEEEE
Q psy17325 393 DFCNYDGTGRQQVIL 407 (461)
Q Consensus 393 ~~~~~~g~g~~~~~~ 407 (461)
..+++. +|..+.++
T Consensus 315 ~~~d~~-~g~~~~~~ 328 (741)
T 2ecf_A 315 VEVTLA-SNQQRVLA 328 (741)
T ss_dssp EEEETT-TCCEEEEE
T ss_pred EEEECC-CCceEEEE
Confidence 888883 45554443
No 177
>1k7b_A Subgroup A ROUS sarcoma virus receptor PG800 and PG950; beta hairpin, 3-10 helix, calcium binding, membrane protein; NMR {Coturnix coturnix} SCOP: g.12.1.1
Probab=98.06 E-value=9.8e-07 Score=58.32 Aligned_cols=26 Identities=42% Similarity=0.955 Sum_probs=23.6
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCCCCC
Q psy17325 2 ADRCVNLTKVCDGKTDCPNGADEGPGC 28 (461)
Q Consensus 2 ~~~Ci~~~~~Cd~~~dC~dg~de~~~C 28 (461)
+++||+.+|+|||..||.||+|| ..|
T Consensus 21 ~g~CIp~~~~CDG~~DC~DgSDE-~~C 46 (47)
T 1k7b_A 21 HGECYPQDWLCDGHPDCDDGRDE-WGC 46 (47)
T ss_dssp CCCCEEGGGSSCSSCCSSSSTTT-GGG
T ss_pred CCcCCCccccCCCcCCCCCCccc-CCC
Confidence 57999999999999999999999 445
No 178
>1ajj_A LR5, low-density lipoprotein receptor; LDL receptor, cysteine-rich module, calcium; 1.70A {Homo sapiens} SCOP: g.12.1.1
Probab=98.05 E-value=1e-06 Score=54.99 Aligned_cols=26 Identities=35% Similarity=0.905 Sum_probs=23.4
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCCCCC
Q psy17325 2 ADRCVNLTKVCDGKTDCPNGADEGPGC 28 (461)
Q Consensus 2 ~~~Ci~~~~~Cd~~~dC~dg~de~~~C 28 (461)
+++||+.+|+|||..||.||+|| ..|
T Consensus 11 ~g~Ci~~~~~CDg~~DC~DgsDE-~~C 36 (37)
T 1ajj_A 11 SGECIHSSWRCDGGPDCKDKSDE-ENC 36 (37)
T ss_dssp TSCEECGGGTTSSSCCSTTCGGG-TTC
T ss_pred CCCeechhhccCCCCCCCCCccc-cCC
Confidence 57899999999999999999999 444
No 179
>2fyj_A Low-density lipoprotein receptor-related protein 1; double module, complement type repeat, calcium, beta-2 hairpin, loop-structures; NMR {Homo sapiens} PDB: 2fyl_B
Probab=98.04 E-value=2e-06 Score=64.27 Aligned_cols=40 Identities=28% Similarity=0.674 Sum_probs=31.9
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCCCCCCCCcccC-CCCCCC
Q psy17325 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKH-KFGLCS 41 (461)
Q Consensus 2 ~~~Ci~~~~~Cd~~~dC~dg~de~~~C~~~~C~~-~~~~C~ 41 (461)
+++||+.+|+|||..||.||+||...|....|.+ ..+.|.
T Consensus 14 ~g~Ci~~~~~CDg~~DC~DgsDE~~~C~~~~C~~~~~f~C~ 54 (82)
T 2fyj_A 14 SGRCIPISWTCDLDDDCGDRSDESASCAYPTCFPLTQFTCN 54 (82)
T ss_dssp SSCEEETTSSSSCSSSSCSTTTTTSSCCCSSSCSSSEEECT
T ss_pred CCCEEeccccCCCcccCCCccccccccccccCCCCCceECC
Confidence 5789999999999999999999955676556743 555564
No 180
>1cr8_A Protein (LOW density lipoprotein receptor related protein); ligand binding, calcium binding, LDLR, LRP, lipid binding protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=98.03 E-value=1.8e-06 Score=55.47 Aligned_cols=26 Identities=42% Similarity=0.929 Sum_probs=23.5
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCCCCC
Q psy17325 2 ADRCVNLTKVCDGKTDCPNGADEGPGC 28 (461)
Q Consensus 2 ~~~Ci~~~~~Cd~~~dC~dg~de~~~C 28 (461)
+++||+.+|+|||..||.||+|| ..|
T Consensus 14 ~g~CI~~~~~CDg~~DC~DgSDE-~~C 39 (42)
T 1cr8_A 14 DGLCIPLRWRCDGDTDCMDSSDE-KSC 39 (42)
T ss_dssp TCCEECGGGSSSSSCCSSSSTTT-TTC
T ss_pred CCeEcChhhcCCCCcCCCCCCcc-cCC
Confidence 47899999999999999999999 455
No 181
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.01 E-value=0.00068 Score=71.13 Aligned_cols=205 Identities=11% Similarity=0.060 Sum_probs=119.0
Q ss_pred ecCCe-EEEEeCCCCeEEEEeCC--C-CcEEEEecC----CCCCceeEEEcCCCCceEEEEeecC--------CCCcEEE
Q psy17325 158 WIGGH-IYWLDSRLNRIEVCDEN--G-TNRIVLAKD----NITQPRGMMLDPSPGTRWLFWTDWG--------ENPRIER 221 (461)
Q Consensus 158 ~~~~~-ly~~d~~~~~I~~~~~~--G-~~~~~l~~~----~~~~p~~ia~d~~~g~~~ly~td~~--------~~~~I~~ 221 (461)
+.++. |+++.....+|.+.+++ | .....+... ....+.++++.|... .|+++... ....|++
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~--~l~~~~~~~~~~~~~~~~~~i~~ 165 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERG--EVWCMAEEFTGEGPSDVRRFLAA 165 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTT--EEEEEEEEECSSSTTCEEEEEEE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCC--EEEEEEecccCCCCCCceeEEEE
Confidence 34677 88888778899999988 4 444444331 123467889999866 78776522 1158999
Q ss_pred EecCC------CCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCccee
Q psy17325 222 IGMDG------SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLK 295 (461)
Q Consensus 222 ~~~dG------~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~ 295 (461)
.++++ ...+.+..........+++.+.+++|+|+........ +.. ..
T Consensus 166 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~-----------------------~~~----~~ 218 (662)
T 3azo_A 166 VPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMP-----------------------WEG----TE 218 (662)
T ss_dssp EETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCT-----------------------TTC----EE
T ss_pred EECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCC-----------------------CCC----cE
Confidence 99988 4444443022345667888888888988763321000 000 25
Q ss_pred eeEEeCCC-C---ceEEEEeC-Ce-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCC--C
Q psy17325 296 IGKANMDG-S---NASILVSG-QL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTK--I 367 (461)
Q Consensus 296 I~~~~~~g-~---~~~~l~~~-~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~--l 367 (461)
|++.++++ . ..+.+... .. +..++..|.+. ||++... ....+|++.++++...+.+.... .
T Consensus 219 i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~----------~~~~~l~~~~~~~~~~~~l~~~~~~~ 287 (662)
T 3azo_A 219 LKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDR----------TGWWNLHRVDPATGAATQLCRREEEF 287 (662)
T ss_dssp EEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECT----------TSSCEEEEECTTTCCEEESSCCSSBS
T ss_pred EEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECC----------CCCeEEEEEECCCCceeecccccccc
Confidence 77777774 2 33344432 22 77888888766 5554332 12337888887665555444221 1
Q ss_pred CC------ceeEEEecCCCeEEEE-cCCCCeEEEEEecCCCCeEE
Q psy17325 368 YW------PNGLTLDIATRRVYFA-DSKLDFIDFCNYDGTGRQQV 405 (461)
Q Consensus 368 ~~------p~glaiD~~~~~ly~~-d~~~~~I~~~~~~g~g~~~~ 405 (461)
.. ...+++.+ +++++++ ..+..+|+.+++ ++....
T Consensus 288 ~~p~w~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~d~--~~~~~~ 329 (662)
T 3azo_A 288 AGPLWTPGMRWFAPLA-NGLIAVVHGKGAAVLGILDP--ESGELV 329 (662)
T ss_dssp SCCCCSTTCCSEEECT-TSCEEEEEBSSSCEEEEEET--TTTEEE
T ss_pred cCccccccCceEeEeC-CCEEEEEEEcCccEEEEEEC--CCCcEE
Confidence 11 24566643 4555554 325557788887 444433
No 182
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.99 E-value=0.0016 Score=62.98 Aligned_cols=224 Identities=9% Similarity=0.044 Sum_probs=121.4
Q ss_pred eeeeecCCeEEEEeCCCC--eEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEE
Q psy17325 154 LAYDWIGGHIYWLDSRLN--RIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRST 231 (461)
Q Consensus 154 iavd~~~~~ly~~d~~~~--~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~ 231 (461)
.++.+.++.|+++....+ +|.+.++++.....+.........++++.|... .|+++. . ...|++.++++...+.
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~--~l~~~~-~-~~~l~~~d~~~g~~~~ 116 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDD--ALFYVK-D-GRNLMRVDLATLEENV 116 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSS--EEEEEE-T-TTEEEEEETTTCCEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCC--EEEEEe-C-CCeEEEEECCCCccee
Confidence 345555666666655333 689999888776666543322233678999876 888887 2 3589999998766555
Q ss_pred EEecccccc--eeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEE
Q psy17325 232 IISTKIYWP--NGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL 309 (461)
Q Consensus 232 i~~~~~~~P--~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l 309 (461)
+........ ...++++....|............ +.+...+.+....+....|++.++.+...+.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l 183 (388)
T 3pe7_A 117 VYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVP-------------LTDWKKFHEFYFTKPCCRLMRVDLKTGESTVI 183 (388)
T ss_dssp EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC-------------CCSHHHHHHHGGGCCCEEEEEEETTTCCEEEE
T ss_pred eeechhhcccccceeECCCCCeeccccccCccccc-------------ccccchhhhhhccCCcceEEEEECCCCceEEe
Confidence 543221111 112335544444322110000000 00000000000000004578888876666666
Q ss_pred EeCCe-eeeEEEec-cCCeEEEeecCceeeEEEeecC-CCCceEEEeecCCCeEEEeeCCC-CCceeEEEecCCCeEEEE
Q psy17325 310 VSGQL-YEALALDL-ENGMLYYSTLKCTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTKI-YWPNGLTLDIATRRVYFA 385 (461)
Q Consensus 310 ~~~~~-p~~iavd~-~~~~lY~t~~~~~~~l~~~d~~-~~~~I~~~~~dG~~~~~l~~~~l-~~p~glaiD~~~~~ly~~ 385 (461)
..... ...+++.| .++.|.++... .+. ...+|+..+.+|...+.+....- .....+++.+++++|+++
T Consensus 184 ~~~~~~~~~~~~sp~dg~~l~~~~~~--------~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~ 255 (388)
T 3pe7_A 184 LQENQWLGHPIYRPYDDSTVAFCHEG--------PHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYV 255 (388)
T ss_dssp EEESSCEEEEEEETTEEEEEEEEECS--------CTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEE
T ss_pred ecCCccccccEECCCCCCEEEEEEec--------CCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEE
Confidence 54433 67888998 77766554322 011 14578888888887766653221 134567888888878554
Q ss_pred -cCCCC---eEEEEEecCCCCe
Q psy17325 386 -DSKLD---FIDFCNYDGTGRQ 403 (461)
Q Consensus 386 -d~~~~---~I~~~~~~g~g~~ 403 (461)
+.... .|+.++++ +|..
T Consensus 256 ~~~~~~~~~~l~~~d~~-~g~~ 276 (388)
T 3pe7_A 256 SYLKGSPDRFIYSADPE-TLEN 276 (388)
T ss_dssp EEETTCCCEEEEEECTT-TCCE
T ss_pred ecCCCCCcceEEEEecC-CCce
Confidence 33222 39999983 3443
No 183
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.98 E-value=0.0015 Score=64.83 Aligned_cols=199 Identities=5% Similarity=0.011 Sum_probs=122.5
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCC-----------CcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCc
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENG-----------TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPR 218 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G-----------~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~ 218 (461)
.+..+++.+.+++++.+-...+.|.+.++.. .....+. ..-..+.+|++.|... .++.+- .....
T Consensus 130 ~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~--~~l~s~-~~dg~ 205 (430)
T 2xyi_A 130 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLR-GHQKEGYGLSWNPNLN--GYLLSA-SDDHT 205 (430)
T ss_dssp CCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEE-CCSSCCCCEEECTTST--TEEEEE-CTTSC
T ss_pred cEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEec-CCCCCeEEEEeCCCCC--CeEEEE-eCCCe
Confidence 4667788775567888888889999998763 2222222 2334578999998744 355554 34567
Q ss_pred EEEEecCCCCc--E-----EEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCC
Q psy17325 219 IERIGMDGSNR--S-----TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291 (461)
Q Consensus 219 I~~~~~dG~~~--~-----~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~ 291 (461)
|...++..... . ............+++.+.++.++.+....+.
T Consensus 206 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~------------------------------ 255 (430)
T 2xyi_A 206 ICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQK------------------------------ 255 (430)
T ss_dssp EEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSE------------------------------
T ss_pred EEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCe------------------------------
Confidence 87777765211 1 1122223457788888767777776655533
Q ss_pred cceeeeEEeCCCC----ceEEEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecC-CCeEEEeeC
Q psy17325 292 VPLKIGKANMDGS----NASILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG-SNRSTIIST 365 (461)
Q Consensus 292 ~~~~I~~~~~~g~----~~~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG-~~~~~l~~~ 365 (461)
|...++... ....+..... ++.|++.|.+..++++-.. .+.|...++.. ......+..
T Consensus 256 ----i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~------------dg~v~vwd~~~~~~~~~~~~~ 319 (430)
T 2xyi_A 256 ----LMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSA------------DKTVALWDLRNLKLKLHSFES 319 (430)
T ss_dssp ----EEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEET------------TSEEEEEETTCTTSCSEEEEC
T ss_pred ----EEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeC------------CCeEEEEeCCCCCCCeEEeec
Confidence 444444422 2222222222 8899999988877776555 45565555543 222222224
Q ss_pred CCCCceeEEEecCCCeEEEEcCCCCeEEEEEec
Q psy17325 366 KIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398 (461)
Q Consensus 366 ~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~ 398 (461)
.-.....|++.+.++.++.+-...+.|...++.
T Consensus 320 h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~ 352 (430)
T 2xyi_A 320 HKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 352 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGG
T ss_pred CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCC
Confidence 455678899988777888887777888888884
No 184
>3a7q_B Low-density lipoprotein receptor-related protein; signaling protein; HET: NAG; 2.60A {Homo sapiens}
Probab=97.95 E-value=2.3e-06 Score=55.54 Aligned_cols=26 Identities=35% Similarity=0.822 Sum_probs=23.6
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCCCCC
Q psy17325 2 ADRCVNLTKVCDGKTDCPNGADEGPGC 28 (461)
Q Consensus 2 ~~~Ci~~~~~Cd~~~dC~dg~de~~~C 28 (461)
+++||+..|+|||..||.||+|| ..|
T Consensus 17 ~g~CI~~~~~CDg~~DC~DgSDE-~~C 42 (44)
T 3a7q_B 17 NERCIPSVWRCDEDDDCLDHSDE-DDC 42 (44)
T ss_dssp TSCEEEGGGTTSSSCCSSSSTTT-SCC
T ss_pred CCCEeChhhccCCCCCCCCCccc-cCC
Confidence 57899999999999999999999 455
No 185
>1jrf_A TVA LDL-A module, subgroup A ROUS sarcoma virus receptors PG800 and PG950; disulfide bond, alpha helix, calcium CAGE, signaling protein; NMR {Coturnix japonica} SCOP: g.12.1.1
Probab=97.93 E-value=1.6e-06 Score=57.26 Aligned_cols=26 Identities=42% Similarity=0.955 Sum_probs=23.4
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCCCCC
Q psy17325 2 ADRCVNLTKVCDGKTDCPNGADEGPGC 28 (461)
Q Consensus 2 ~~~Ci~~~~~Cd~~~dC~dg~de~~~C 28 (461)
+++||+.+|+|||..||.||+|| ..|
T Consensus 19 ~~~CIp~~~~CDG~~DC~DgSDE-~~C 44 (47)
T 1jrf_A 19 HGECYPQDWLCDGHPDCDDGRDE-WGC 44 (47)
T ss_dssp CTTTSGGGGSSSSSCCSSSSCTT-HHH
T ss_pred CCeEcCHhhcCCCCcCCCCCccc-ccC
Confidence 57899999999999999999999 444
No 186
>1d2l_A Lipoprotein receptor related protein; ligand binding, calcium binding, complement-like repeat, signaling protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=97.93 E-value=3.3e-06 Score=54.97 Aligned_cols=24 Identities=38% Similarity=0.864 Sum_probs=22.5
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCC
Q psy17325 2 ADRCVNLTKVCDGKTDCPNGADEG 25 (461)
Q Consensus 2 ~~~Ci~~~~~Cd~~~dC~dg~de~ 25 (461)
+++||+.+|+|||..||.|||||.
T Consensus 15 ~g~CI~~~~~CDG~~DC~DgSDE~ 38 (45)
T 1d2l_A 15 NSRCIQERWKCDGDNDCLDNSDEA 38 (45)
T ss_dssp TTEEECGGGTTTSSCTTTTCSTTS
T ss_pred CCCeEehhhccCCCCCCCCCCCCC
Confidence 578999999999999999999994
No 187
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.92 E-value=0.0042 Score=59.67 Aligned_cols=233 Identities=11% Similarity=-0.025 Sum_probs=123.7
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCCc-EEEE---ecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCC
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN-RIVL---AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~-~~~l---~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG 226 (461)
...+++.+ +..+++-..++.|.+.+++... ..++ ..+.-.....|++.|... +|.-.. ....|...++..
T Consensus 85 v~~~~~s~--d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~--~l~sgs--~d~~i~iwd~~~ 158 (344)
T 4gqb_B 85 VADLTWVG--ERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGT--QAVSGS--KDICIKVWDLAQ 158 (344)
T ss_dssp EEEEEEET--TTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSS--EEEEEE--TTSCEEEEETTT
T ss_pred EEEEEEeC--CCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCC--EEEEEe--CCCeEEEEECCC
Confidence 34455553 3344566678899999876433 2221 223334578899998755 555544 345777777764
Q ss_pred CCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCc-
Q psy17325 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN- 305 (461)
Q Consensus 227 ~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~- 305 (461)
......+.........+++.+.+..++.+-...+ .|...++....
T Consensus 159 ~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~----------------------------------~v~iwd~~~~~~ 204 (344)
T 4gqb_B 159 QVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDN----------------------------------RILLWDTRCPKP 204 (344)
T ss_dssp TEEEEEECCCSSCEEEEEECSSCTTEEEEEETTS----------------------------------CEEEEETTSSSC
T ss_pred CcEEEEEcCcCCceEEEEecCCCCCceeeecccc----------------------------------ccccccccccce
Confidence 3322222223345677888877666666544332 24444443222
Q ss_pred eEEEEeC--C-eeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeec-CCCeEEEeeCCCCCceeEEEecCCCe
Q psy17325 306 ASILVSG--Q-LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD-GSNRSTIISTKIYWPNGLTLDIATRR 381 (461)
Q Consensus 306 ~~~l~~~--~-~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~d-G~~~~~l~~~~l~~p~glaiD~~~~~ 381 (461)
...+... . .+..+++.|.+++++.+-.. .+.|...++. ++....+. ..-.....|++.+.+.+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~------------dg~v~~wd~~~~~~~~~~~-~h~~~v~~v~fsp~g~~ 271 (344)
T 4gqb_B 205 ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDE------------NGTVSLVDTKSTSCVLSSA-VHSQCVTGLVFSPHSVP 271 (344)
T ss_dssp EEECC----CCCEEEEEECSSCTTEEEEEET------------TSEEEEEESCC--CCEEEE-CCSSCEEEEEECSSSSC
T ss_pred eeeeecceeeccceeeeecCCCCcceEEecc------------CCcEEEEECCCCcEEEEEc-CCCCCEEEEEEccCCCe
Confidence 2222111 1 16788888888877766444 3445444443 23333333 44455678888766666
Q ss_pred EEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeCCCceeec
Q psy17325 382 VYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKT 448 (461)
Q Consensus 382 ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~~~~~i~~ 448 (461)
+..+-...+.|...++ .......+ ...... ...+++.+++..|..|-...++|++
T Consensus 272 ~lasgs~D~~i~vwd~--~~~~~~~~-~~H~~~---------V~~v~~sp~~~~llas~s~D~~v~~ 326 (344)
T 4gqb_B 272 FLASLSEDCSLAVLDS--SLSELFRS-QAHRDF---------VRDATWSPLNHSLLTTVGWDHQVVH 326 (344)
T ss_dssp CEEEEETTSCEEEECT--TCCEEEEE-CCCSSC---------EEEEEECSSSTTEEEEEETTSCEEE
T ss_pred EEEEEeCCCeEEEEEC--CCCcEEEE-cCCCCC---------EEEEEEeCCCCeEEEEEcCCCeEEE
Confidence 6555455677888787 33332222 111111 1123333456667777666666643
No 188
>2knx_A Prolow-density lipoprotein receptor-related prote; LDLR, ligand binding module, ligand binding repeat, compleme repeat, protein binding; NMR {Homo sapiens}
Probab=97.92 E-value=2.6e-06 Score=56.83 Aligned_cols=26 Identities=42% Similarity=0.822 Sum_probs=23.5
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCCCCC
Q psy17325 2 ADRCVNLTKVCDGKTDCPNGADEGPGC 28 (461)
Q Consensus 2 ~~~Ci~~~~~Cd~~~dC~dg~de~~~C 28 (461)
+++||+.+|+|||..||.||+||. .|
T Consensus 17 ~g~CI~~~~~CDG~~DC~DgSDE~-~C 42 (50)
T 2knx_A 17 THVCVPERWLCDGDKDCADGADES-IA 42 (50)
T ss_dssp TTEEEETTTTTSSSCCSTTCGGGS-GG
T ss_pred CCeEcChhhcCCCCCCCCCCCccc-cc
Confidence 578999999999999999999994 45
No 189
>2jm4_A Relaxin receptor 1; LDL-A module, RXFP1 receptor, LGR7, signaling protein; NMR {Homo sapiens}
Probab=97.92 E-value=3.1e-06 Score=54.69 Aligned_cols=25 Identities=40% Similarity=0.880 Sum_probs=22.9
Q ss_pred CccCCCCCCCCCCCCCCCCCCCCCCC
Q psy17325 3 DRCVNLTKVCDGKTDCPNGADEGPGC 28 (461)
Q Consensus 3 ~~Ci~~~~~Cd~~~dC~dg~de~~~C 28 (461)
++||+.+|+|||..||.||+|| ..|
T Consensus 18 g~CI~~~~~CDg~~DC~DgSDE-~~C 42 (43)
T 2jm4_A 18 TKCLPQLLHCNGVDDCGNQADE-DNC 42 (43)
T ss_dssp SCEEEGGGTTSSCCCSSSCCTT-SSC
T ss_pred CeEcCHhhccCCCCCCCCCccc-CCC
Confidence 7899999999999999999999 445
No 190
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.92 E-value=0.002 Score=68.14 Aligned_cols=203 Identities=10% Similarity=0.124 Sum_probs=116.6
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCC-----CcEEEEecCCCC--------------CceeEEEcCCCCceEEEE
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENG-----TNRIVLAKDNIT--------------QPRGMMLDPSPGTRWLFW 210 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G-----~~~~~l~~~~~~--------------~p~~ia~d~~~g~~~ly~ 210 (461)
.+..+++.+.++.|+++. .+.|.+.++++ .....+...... .+.++++.|... +|++
T Consensus 122 ~~~~~~~SpdG~~la~~~--~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~--~la~ 197 (706)
T 2z3z_A 122 ETASLDFSPVGDRVAYVR--NHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGS--CLAF 197 (706)
T ss_dssp CCTTCEECTTSSEEEEEE--TTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSS--EEEE
T ss_pred cccCCcCCCCCCEEEEEE--CCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCC--EEEE
Confidence 455677887777777763 47899999876 444443332211 257899999866 7777
Q ss_pred eecC-------------------------------CCCcEEEEecCCCCcEEEEec--ccccceeEEeeccCCeeEEecC
Q psy17325 211 TDWG-------------------------------ENPRIERIGMDGSNRSTIIST--KIYWPNGLTLDIATRRVYFADS 257 (461)
Q Consensus 211 td~~-------------------------------~~~~I~~~~~dG~~~~~i~~~--~~~~P~glavD~~~~~ly~~d~ 257 (461)
+... ....|+..++++.....+... .-..+..+++.+.++.|+++..
T Consensus 198 ~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 277 (706)
T 2z3z_A 198 YRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEV 277 (706)
T ss_dssp EEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEE
T ss_pred EEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEe
Confidence 6421 124566777665433222211 1124566777777777776432
Q ss_pred CCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCC-ceEEEEeCCe------eeeEEEec--cCCeEE
Q psy17325 258 KLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS-NASILVSGQL------YEALALDL--ENGMLY 328 (461)
Q Consensus 258 ~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~-~~~~l~~~~~------p~~iavd~--~~~~lY 328 (461)
....- ...|...++++. ..+.+..... ...+++.| .++.||
T Consensus 278 ~~~~~------------------------------~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~ 327 (706)
T 2z3z_A 278 NRAQN------------------------------ECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIW 327 (706)
T ss_dssp CTTSC------------------------------EEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEE
T ss_pred CCCCC------------------------------eeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEE
Confidence 21100 024666776655 4444432111 25677777 554443
Q ss_pred EeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCcee-EEEecCCCeEEEEcCCCC----eEEEEEec
Q psy17325 329 YSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG-LTLDIATRRVYFADSKLD----FIDFCNYD 398 (461)
Q Consensus 329 ~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~g-laiD~~~~~ly~~d~~~~----~I~~~~~~ 398 (461)
.++. ....+|+..+.+|...+.+. ..-..... +++++++++||++....+ .|++++++
T Consensus 328 ~~~~-----------~g~~~l~~~~~~~~~~~~l~-~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 390 (706)
T 2z3z_A 328 QSRR-----------DGWNHLYLYDTTGRLIRQVT-KGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIK 390 (706)
T ss_dssp EECT-----------TSSCEEEEEETTSCEEEECC-CSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETT
T ss_pred EEcc-----------CCccEEEEEECCCCEEEecC-CCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcC
Confidence 3322 22456777777776555554 22222334 789988889998866544 88999883
No 191
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.91 E-value=0.01 Score=60.69 Aligned_cols=199 Identities=14% Similarity=0.120 Sum_probs=123.8
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCc
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~ 229 (461)
.+.++++.+.+..|. +-...+.|.+.+.++.....+... -..+.+|++.|... +|.... ....|...+.++...
T Consensus 346 ~v~~~~~s~~g~~l~-~~~~dg~v~~~~~~~~~~~~~~~~-~~~v~~~~~s~dg~--~l~~~~--~d~~v~~~~~~~~~~ 419 (577)
T 2ymu_A 346 SVWGVAFSPDGQTIA-SASDDKTVKLWNRNGQLLQTLTGH-SSSVRGVAFSPDGQ--TIASAS--DDKTVKLWNRNGQLL 419 (577)
T ss_dssp CEEEEEECTTSSEEE-EEETTSEEEEEETTCCEEEEEECC-SSCEEEEEECTTSS--CEEEEE--TTSEEEEECTTCCEE
T ss_pred CEEEEEECCCCCEEE-EEeCCCEEEEEcCCCCEEEEecCC-CCCeEEEEECCCCC--EEEEEe--CCCEEEEEeCCCCEE
Confidence 345677776554444 444568899999888776665433 25688999998755 666554 345677777776544
Q ss_pred EEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEE
Q psy17325 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL 309 (461)
Q Consensus 230 ~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l 309 (461)
..+. ..-....+|++.+.++.|..+.... .|...++++.....+
T Consensus 420 ~~~~-~~~~~v~~~~~s~d~~~l~~~~~d~-----------------------------------~v~~w~~~~~~~~~~ 463 (577)
T 2ymu_A 420 QTLT-GHSSSVWGVAFSPDDQTIASASDDK-----------------------------------TVKLWNRNGQLLQTL 463 (577)
T ss_dssp EEEE-CCSSCEEEEEECTTSSEEEEEETTS-----------------------------------EEEEEETTSCEEEEE
T ss_pred EEec-CCCCCeEEEEECCCCCEEEEEcCCC-----------------------------------EEEEEECCCCEEEEE
Confidence 4332 2234567888988776666554332 355556666655555
Q ss_pred EeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCC
Q psy17325 310 VSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 388 (461)
Q Consensus 310 ~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~ 388 (461)
..... +..+++.|.+..|..+.. .+.|...+.+|.....+. ..-.....|++.+++..|..+. .
T Consensus 464 ~~~~~~v~~~~~spd~~~las~~~-------------d~~i~iw~~~~~~~~~~~-~h~~~v~~l~~s~dg~~l~s~~-~ 528 (577)
T 2ymu_A 464 TGHSSSVRGVAFSPDGQTIASASD-------------DKTVKLWNRNGQLLQTLT-GHSSSVRGVAFSPDGQTIASAS-D 528 (577)
T ss_dssp ECCSSCEEEEEECTTSCEEEEEET-------------TSEEEEEETTSCEEEEEE-CCSSCEEEEEECTTSSCEEEEE-T
T ss_pred cCCCCCEEEEEEcCCCCEEEEEeC-------------CCEEEEEcCCCCEEEEEe-CCCCCEEEEEEcCCCCEEEEEE-C
Confidence 43333 788999987665554332 344555556666555554 4455678899987666666553 4
Q ss_pred CCeEEEEEecCCCCeEEEE
Q psy17325 389 LDFIDFCNYDGTGRQQVIL 407 (461)
Q Consensus 389 ~~~I~~~~~~g~g~~~~~~ 407 (461)
.+.|...+. +|.....+
T Consensus 529 dg~v~lwd~--~~~~~~~~ 545 (577)
T 2ymu_A 529 DKTVKLWNR--NGQLLQTL 545 (577)
T ss_dssp TSEEEEECT--TSCEEEEE
T ss_pred cCEEEEEeC--CCCEEEEE
Confidence 567888887 67654444
No 192
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.89 E-value=0.0057 Score=57.56 Aligned_cols=209 Identities=16% Similarity=0.213 Sum_probs=118.7
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEeccccc
Q psy17325 160 GGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYW 239 (461)
Q Consensus 160 ~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~~~~~ 239 (461)
.++||+.. ..+.|.+.+.+|...-..... ......+++|+. | .||+.. ....|++.+.+|...... ......
T Consensus 107 ~~~l~v~t-~~~~l~~~d~~g~~~~~~~~~-~~~~~~~~~~~~-g--~l~vgt--~~~~l~~~d~~g~~~~~~-~~~~~~ 178 (330)
T 3hxj_A 107 EDILYVTS-MDGHLYAINTDGTEKWRFKTK-KAIYATPIVSED-G--TIYVGS--NDNYLYAINPDGTEKWRF-KTNDAI 178 (330)
T ss_dssp TTEEEEEC-TTSEEEEECTTSCEEEEEECS-SCCCSCCEECTT-S--CEEEEC--TTSEEEEECTTSCEEEEE-ECSSCC
T ss_pred CCEEEEEe-cCCEEEEEcCCCCEEEEEcCC-CceeeeeEEcCC-C--EEEEEc--CCCEEEEECCCCCEeEEE-ecCCCc
Confidence 67777654 457899999886654333222 123456778764 4 577765 336899988885433222 222234
Q ss_pred ceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCe-eeeE
Q psy17325 240 PNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL-YEAL 318 (461)
Q Consensus 240 P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~-p~~i 318 (461)
...+++|. .++||++. . .|.+.+.+|........... +..+
T Consensus 179 ~~~~~~d~-~g~l~v~t--~-----------------------------------~l~~~d~~g~~~~~~~~~~~~~~~~ 220 (330)
T 3hxj_A 179 TSAASIGK-DGTIYFGS--D-----------------------------------KVYAINPDGTEKWNFYAGYWTVTRP 220 (330)
T ss_dssp CSCCEECT-TCCEEEES--S-----------------------------------SEEEECTTSCEEEEECCSSCCCSCC
T ss_pred eeeeEEcC-CCEEEEEe--C-----------------------------------EEEEECCCCcEEEEEccCCcceece
Confidence 55677774 67788877 2 14555544443322222112 6778
Q ss_pred EEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEec
Q psy17325 319 ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398 (461)
Q Consensus 319 avd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~ 398 (461)
++|+ +|.||++... +.|.+.+.+|.....+. ..-..+..+++| .+++||++.. .+.|.+++.
T Consensus 221 ~~~~-~g~l~v~t~~-------------~gl~~~~~~g~~~~~~~-~~~~~~~~~~~~-~~g~l~v~t~-~ggl~~~d~- 282 (330)
T 3hxj_A 221 AISE-DGTIYVTSLD-------------GHLYAINPDGTEKWRFK-TGKRIESSPVIG-NTDTIYFGSY-DGHLYAINP- 282 (330)
T ss_dssp EECT-TSCEEEEETT-------------TEEEEECTTSCEEEEEE-CSSCCCSCCEEC-TTSCEEEECT-TCEEEEECT-
T ss_pred EECC-CCeEEEEcCC-------------CeEEEECCCCCEeEEee-CCCCccccceEc-CCCeEEEecC-CCCEEEECC-
Confidence 8885 5678887542 35666655554443332 223335567786 6789998854 457888887
Q ss_pred CCCCeEEEEEccccceeeccCCCCCcceEEEee-eCCEEEEEeCCCcee
Q psy17325 399 GTGRQQVILIDLMVEFTNDLMGDNGVPALALDL-ENGMLYYSTEGAEFL 446 (461)
Q Consensus 399 g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~lYwtd~~~~~i 446 (461)
+|......... .. ...++.. .++.||+...+ +.+
T Consensus 283 -~g~~~~~~~~~--~~----------~~~~~~~d~~g~l~~gt~~-G~~ 317 (330)
T 3hxj_A 283 -DGTEKWNFETG--SW----------IIATPVIDENGTIYFGTRN-GKF 317 (330)
T ss_dssp -TSCEEEEEECS--SC----------CCSCCEECTTCCEEEECTT-SCE
T ss_pred -CCcEEEEEEcC--Cc----------cccceEEcCCCEEEEEcCC-CeE
Confidence 67654332211 11 1224444 56788887644 444
No 193
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.87 E-value=0.014 Score=54.59 Aligned_cols=192 Identities=9% Similarity=0.019 Sum_probs=110.4
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcE----EEEe-cCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEec
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR----IVLA-KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGM 224 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~----~~l~-~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~ 224 (461)
.+..+++.+.+..|+... .+.|.+.+++.... ..+. ...-.....+++.|... +|+... ....|...++
T Consensus 53 ~v~~~~~~~~~~~l~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~--~d~~i~~~d~ 126 (337)
T 1gxr_A 53 VVCAVTISNPTRHVYTGG--KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGC--TLIVGG--EASTLSIWDL 126 (337)
T ss_dssp CCCEEEECSSSSEEEEEC--BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSS--EEEEEE--SSSEEEEEEC
T ss_pred ceEEEEEecCCcEEEEcC--CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCC--EEEEEc--CCCcEEEEEC
Confidence 345677776555555443 78999999765321 1111 12334578899999765 666654 3467888888
Q ss_pred CCCCcEE--EEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCC
Q psy17325 225 DGSNRST--IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMD 302 (461)
Q Consensus 225 dG~~~~~--i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~ 302 (461)
....... ...........+++.+.++.|+.+.... .|...++.
T Consensus 127 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----------------------------------~v~~~d~~ 171 (337)
T 1gxr_A 127 AAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG-----------------------------------NIAVWDLH 171 (337)
T ss_dssp CCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTS-----------------------------------CEEEEETT
T ss_pred CCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCC-----------------------------------cEEEEeCC
Confidence 7654222 2223334567888888666666655432 35555554
Q ss_pred CCceEEEEeCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCC
Q psy17325 303 GSNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380 (461)
Q Consensus 303 g~~~~~l~~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~ 380 (461)
.......+.... +..++++|.+..|+.+.. .+.|...++......... ..-..+..+++.+.+.
T Consensus 172 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-------------dg~i~~~d~~~~~~~~~~-~~~~~v~~~~~s~~~~ 237 (337)
T 1gxr_A 172 NQTLVRQFQGHTDGASCIDISNDGTKLWTGGL-------------DNTVRSWDLREGRQLQQH-DFTSQIFSLGYCPTGE 237 (337)
T ss_dssp TTEEEEEECCCSSCEEEEEECTTSSEEEEEET-------------TSEEEEEETTTTEEEEEE-ECSSCEEEEEECTTSS
T ss_pred CCceeeeeecccCceEEEEECCCCCEEEEEec-------------CCcEEEEECCCCceEeee-cCCCceEEEEECCCCC
Confidence 443332332222 788999987666665433 344555555433322222 2334567888886666
Q ss_pred eEEEEcCCCCeEEEEEe
Q psy17325 381 RVYFADSKLDFIDFCNY 397 (461)
Q Consensus 381 ~ly~~d~~~~~I~~~~~ 397 (461)
.|+.+. ..+.|...++
T Consensus 238 ~l~~~~-~~~~i~~~~~ 253 (337)
T 1gxr_A 238 WLAVGM-ESSNVEVLHV 253 (337)
T ss_dssp EEEEEE-TTSCEEEEET
T ss_pred EEEEEc-CCCcEEEEEC
Confidence 666654 4567888888
No 194
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.87 E-value=0.011 Score=58.81 Aligned_cols=240 Identities=8% Similarity=0.051 Sum_probs=127.1
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCC---CCcEEEEec-CCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecC
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDEN---GTNRIVLAK-DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD 225 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~---G~~~~~l~~-~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~d 225 (461)
.+.++++.+.+..|+++-...+.|.+.++. |.....+.. .....+.+|++.|... +|+.++ ....|+..++.
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~--~l~~~~--~~g~v~~~~~~ 179 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT--TVIIAD--KFGDVYSIDIN 179 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS--EEEEEE--TTSEEEEEETT
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC--EEEEEe--CCCcEEEEecC
Confidence 467788888777777887778999999876 444444321 2224578999999866 888776 24578887775
Q ss_pred CCCcEE----EEecccccceeEEeecc---CCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeE
Q psy17325 226 GSNRST----IISTKIYWPNGLTLDIA---TRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGK 298 (461)
Q Consensus 226 G~~~~~----i~~~~~~~P~glavD~~---~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~ 298 (461)
...... .+.........|++.+. +..|+.+.... .|..
T Consensus 180 ~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~-----------------------------------~i~v 224 (450)
T 2vdu_B 180 SIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDE-----------------------------------HIKI 224 (450)
T ss_dssp SCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTS-----------------------------------CEEE
T ss_pred CcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCC-----------------------------------cEEE
Confidence 433211 11222345778888876 44555444332 3444
Q ss_pred EeCCC-CceEEEEeCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeE----------EE-e-
Q psy17325 299 ANMDG-SNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRS----------TI-I- 363 (461)
Q Consensus 299 ~~~~g-~~~~~l~~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~----------~l-~- 363 (461)
.++.. .....+..... +..+++. .+..|+..... .....| |......+........... .+ .
T Consensus 225 wd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d-~~v~vw-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (450)
T 2vdu_B 225 SHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGD-DKIFAW-DWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNE 301 (450)
T ss_dssp EEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESS-SEEEEE-ETTTCCEEEEEECHHHHGGGCCTTSBC-------
T ss_pred EECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCC-CeEEEE-ECCCCcEeeeecchhhhhhhhhhccccccccccc
Confidence 44443 32333232222 7888888 55555544322 222223 2222222222211100000 00 0
Q ss_pred --eCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEe-cCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEe
Q psy17325 364 --STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY-DGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYST 440 (461)
Q Consensus 364 --~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~-~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd 440 (461)
...-....+|++.+.+..||.+-...+.|...++ +.++.....+...... ..+.++++..+.++++-
T Consensus 302 ~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~----------~~v~~~~~~~~~~~v~~ 371 (450)
T 2vdu_B 302 NNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP----------YNVISLSAHNDEFQVTL 371 (450)
T ss_dssp ---CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS----------SCEEEEEEETTEEEEEE
T ss_pred ccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC----------CceEEEEecCCcEEEEE
Confidence 0111235678888778888888766788888888 2233221211111101 12566777666666664
Q ss_pred C
Q psy17325 441 E 441 (461)
Q Consensus 441 ~ 441 (461)
.
T Consensus 372 ~ 372 (450)
T 2vdu_B 372 D 372 (450)
T ss_dssp C
T ss_pred e
Confidence 3
No 195
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.85 E-value=0.0015 Score=68.55 Aligned_cols=209 Identities=12% Similarity=0.094 Sum_probs=118.0
Q ss_pred eeeeeeeecCCeEEEEeC--C-CC--eEEEEeCCCCcEEEEecCCCCCce---------eEEEc--CCCCceE-EEEeec
Q psy17325 151 VEGLAYDWIGGHIYWLDS--R-LN--RIEVCDENGTNRIVLAKDNITQPR---------GMMLD--PSPGTRW-LFWTDW 213 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~--~-~~--~I~~~~~~G~~~~~l~~~~~~~p~---------~ia~d--~~~g~~~-ly~td~ 213 (461)
...++++ .+.+||+.. . .+ .|.+. ..+...+.+.... ...+ ..+.. |..+ + |+++.
T Consensus 26 ~~~~~~s--~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~SPDg~--~~la~~~- 98 (662)
T 3azo_A 26 PACVGAV--GDEVWWVAPRPAEAGRATLVRR-RADGAEESALPAP-WNVRNRVFEYSGFPWAGVPRPAGG--PLLVFTH- 98 (662)
T ss_dssp CEEEEEE--TTEEEEEEEETTTTTEEEEEEE-CTTSCEEESSCTT-CCBCCCGGGTCCCCEEEECCSSSS--CEEEEEB-
T ss_pred cceeEEc--CCeEEEEecCcccCCcEEEEEE-CCCCCcceeCCCC-ccccccccccCCccceeeeecCCC--eEEEEEE-
Confidence 4455665 556777654 2 22 35554 3333344443322 1222 34343 6655 7 77776
Q ss_pred CCCCcEEEEecC--C-CCcEEEEec----ccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEe
Q psy17325 214 GENPRIERIGMD--G-SNRSTIIST----KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWID 286 (461)
Q Consensus 214 ~~~~~I~~~~~d--G-~~~~~i~~~----~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d 286 (461)
....+|+.++++ | .....+... ....+.++++.+.+++|+++......
T Consensus 99 ~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~------------------------- 153 (662)
T 3azo_A 99 FGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTG------------------------- 153 (662)
T ss_dssp TTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECS-------------------------
T ss_pred CCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccC-------------------------
Confidence 335789999998 5 554444331 13356789999989999887643100
Q ss_pred cCCCCcceeeeEEeCCC------CceEEEE-eCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCC-
Q psy17325 287 EGGNGVPLKIGKANMDG------SNASILV-SGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGS- 357 (461)
Q Consensus 287 ~~~~~~~~~I~~~~~~g------~~~~~l~-~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~- 357 (461)
.........|++.++++ ...+.+. .... ...+++.|.++.|+|+...... + .| ....|+..+++++
T Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~-~---~~-~~~~i~~~d~~~~g 228 (662)
T 3azo_A 154 EGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPR-M---PW-EGTELKTARVTEDG 228 (662)
T ss_dssp SSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTC-C---TT-TCEEEEEEEECTTS
T ss_pred CCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCC-C---CC-CCcEEEEEEECCCC
Confidence 00000003578888887 5555554 3222 6778899988888776532000 0 00 1357888888742
Q ss_pred ---CeEEEeeCCCCCceeEEEecCCCeEEEEcCCCC--eEEEEEe
Q psy17325 358 ---NRSTIISTKIYWPNGLTLDIATRRVYFADSKLD--FIDFCNY 397 (461)
Q Consensus 358 ---~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~--~I~~~~~ 397 (461)
..+.+....-..+..+++.+++. ||++....+ .|+++++
T Consensus 229 ~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~ 272 (662)
T 3azo_A 229 RFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDP 272 (662)
T ss_dssp CEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECT
T ss_pred cccccEEeCCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEEC
Confidence 33444423345677888876655 666644444 8888887
No 196
>2fcw_B LDL receptor, low-density lipoprotein receptor; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: g.12.1.1 g.12.1.1 PDB: 2kri_B
Probab=97.85 E-value=1.7e-06 Score=64.18 Aligned_cols=39 Identities=31% Similarity=0.757 Sum_probs=31.5
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCC
Q psy17325 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCS 41 (461)
Q Consensus 2 ~~~Ci~~~~~Cd~~~dC~dg~de~~~C~~~~C~~~~~~C~ 41 (461)
+++||+.+|+|||..||.||+|| ..|....|....+.|.
T Consensus 12 ~g~CI~~~~~CDg~~DC~DgSDE-~~C~~~~C~~~~f~C~ 50 (80)
T 2fcw_B 12 DGKCISRQFVCDSDRDCLDGSDE-ASCPVLTCGPASFQCN 50 (80)
T ss_dssp TSCEEEGGGTTSSSCCSTTCTTT-TTHHHHHCCTTEEECT
T ss_pred CCCEEeeecccCCcccCCCcccc-cccccccCCceeeECC
Confidence 57999999999999999999999 5675445666566664
No 197
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.85 E-value=0.019 Score=58.63 Aligned_cols=199 Identities=13% Similarity=0.113 Sum_probs=122.0
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCc
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~ 229 (461)
.+.++++.+.+ ....+-...+.|.+.++++.....+.. .-..+.++++.|... .|.... ....|...+.++...
T Consensus 305 ~v~~~~~~~~~-~~l~t~~~d~~i~~w~~~~~~~~~~~~-~~~~v~~~~~s~~g~--~l~~~~--~dg~v~~~~~~~~~~ 378 (577)
T 2ymu_A 305 SVWGVAFSPDG-QTIASASDDKTVKLWNRNGQHLQTLTG-HSSSVWGVAFSPDGQ--TIASAS--DDKTVKLWNRNGQLL 378 (577)
T ss_dssp CEEEEEECTTS-SEEEEEETTSCEEEEETTSCEEEEECC-CSSCEEEEEECTTSS--EEEEEE--TTSEEEEEETTCCEE
T ss_pred CeEEEEECCCC-CEEEEEeCCCeEEEEeCCCCeeEEEeC-CCCCEEEEEECCCCC--EEEEEe--CCCEEEEEcCCCCEE
Confidence 34567776544 444555567889999998877655543 235578899999855 665544 345677777776544
Q ss_pred EEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEE
Q psy17325 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL 309 (461)
Q Consensus 230 ~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l 309 (461)
..+. ..-..+.+|++.+.++.|..+.... .|...+.++.....+
T Consensus 379 ~~~~-~~~~~v~~~~~s~dg~~l~~~~~d~-----------------------------------~v~~~~~~~~~~~~~ 422 (577)
T 2ymu_A 379 QTLT-GHSSSVRGVAFSPDGQTIASASDDK-----------------------------------TVKLWNRNGQLLQTL 422 (577)
T ss_dssp EEEE-CCSSCEEEEEECTTSSCEEEEETTS-----------------------------------EEEEECTTCCEEEEE
T ss_pred EEec-CCCCCeEEEEECCCCCEEEEEeCCC-----------------------------------EEEEEeCCCCEEEEe
Confidence 4332 2334577899988776666554332 355555666555544
Q ss_pred EeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCC
Q psy17325 310 VSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 388 (461)
Q Consensus 310 ~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~ 388 (461)
..... ..++++.|.+..|..+.. .+.|...++++.....+. ..-.....|++.+++..|..+ ..
T Consensus 423 ~~~~~~v~~~~~s~d~~~l~~~~~-------------d~~v~~w~~~~~~~~~~~-~~~~~v~~~~~spd~~~las~-~~ 487 (577)
T 2ymu_A 423 TGHSSSVWGVAFSPDDQTIASASD-------------DKTVKLWNRNGQLLQTLT-GHSSSVRGVAFSPDGQTIASA-SD 487 (577)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEET-------------TSEEEEEETTSCEEEEEE-CCSSCEEEEEECTTSCEEEEE-ET
T ss_pred cCCCCCeEEEEECCCCCEEEEEcC-------------CCEEEEEECCCCEEEEEc-CCCCCEEEEEEcCCCCEEEEE-eC
Confidence 43333 778999987776654433 334544555665555544 444567789998665555544 44
Q ss_pred CCeEEEEEecCCCCeEEEE
Q psy17325 389 LDFIDFCNYDGTGRQQVIL 407 (461)
Q Consensus 389 ~~~I~~~~~~g~g~~~~~~ 407 (461)
.+.|...+. +|.....+
T Consensus 488 d~~i~iw~~--~~~~~~~~ 504 (577)
T 2ymu_A 488 DKTVKLWNR--NGQLLQTL 504 (577)
T ss_dssp TSEEEEEET--TSCEEEEE
T ss_pred CCEEEEEcC--CCCEEEEE
Confidence 567877777 66655444
No 198
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.83 E-value=0.0021 Score=68.28 Aligned_cols=261 Identities=10% Similarity=0.091 Sum_probs=138.1
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCC---cEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCC
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGT---NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~---~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~ 227 (461)
+..+++.+.++.|+++.. +.|.+.++++. ....+... -..+..+++.|... +|.++. . ..|+..++++.
T Consensus 111 v~~~~~SpDg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~~-~~~~~~~~~SPDG~--~la~~~-~--~~i~~~d~~~g 182 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG--GELYLYDLKQEGKAAVRQLTHG-EGFATDAKLSPKGG--FVSFIR-G--RNLWVIDLASG 182 (741)
T ss_dssp SCCCEECTTSSEEEEEET--TEEEEEESSSCSTTSCCBCCCS-SSCEEEEEECTTSS--EEEEEE-T--TEEEEEETTTT
T ss_pred cceeEECCCCCEEEEEeC--CcEEEEECCCCCcceEEEcccC-CcccccccCCCCCC--EEEEEe-C--CcEEEEecCCC
Confidence 456788888888888776 89999998876 44444332 24578899999866 777665 2 37999988875
Q ss_pred CcEEEEeccc----------------ccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCC
Q psy17325 228 NRSTIISTKI----------------YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291 (461)
Q Consensus 228 ~~~~i~~~~~----------------~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~ 291 (461)
....+..... ..+.++++.+.+++|+++.............. ..........+.|...+...
T Consensus 183 ~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~--~~p~~~~~~~~~~~~~g~~~ 260 (741)
T 2ecf_A 183 RQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYE--VYADRTDVIEQRYPAAGDAN 260 (741)
T ss_dssp EEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEE--ECSSCEEEEEEECCBTTSCC
T ss_pred CEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCC--CCCCcccceEeecCCCCCCC
Confidence 4433322211 12577899998888888743221100000000 00000000001111111100
Q ss_pred cceeeeEEeCCC-CceEEEEeC---Ce-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeC-
Q psy17325 292 VPLKIGKANMDG-SNASILVSG---QL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIST- 365 (461)
Q Consensus 292 ~~~~I~~~~~~g-~~~~~l~~~---~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~- 365 (461)
-...|.+.++++ .....+... .. +..+++ |.+..|+++... .......|+..++++.....+...
T Consensus 261 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~--------~~~~~~~i~~~d~~~g~~~~~~~~~ 331 (741)
T 2ecf_A 261 VQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQS--------RDQKKLDLVEVTLASNQQRVLAHET 331 (741)
T ss_dssp CEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEE--------TTSSEEEEEEEETTTCCEEEEEEEE
T ss_pred CeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEec--------ccCCeEEEEEEECCCCceEEEEEcC
Confidence 012566777766 554444322 12 778899 988888876431 001234677777765554444422
Q ss_pred CCC---CceeEEEecCCCeEEEEcCCC--CeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEe
Q psy17325 366 KIY---WPNGLTLDIATRRVYFADSKL--DFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYST 440 (461)
Q Consensus 366 ~l~---~p~glaiD~~~~~ly~~d~~~--~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd 440 (461)
.-. ....+++.+++. ++++-... ..|+.+++ +|. ...+........ ...+++.+++.||++-
T Consensus 332 ~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~--~~~-~~~l~~~~~~v~---------~~~~~s~dg~~l~~~~ 398 (741)
T 2ecf_A 332 SPTWVPLHNSLRFLDDGS-ILWSSERTGFQHLYRIDS--KGK-AAALTHGNWSVD---------ELLAVDEKAGLAYFRA 398 (741)
T ss_dssp CSSCCCCCSCCEECTTSC-EEEEECTTSSCEEEEECS--SSC-EEESCCSSSCEE---------EEEEEETTTTEEEEEE
T ss_pred CCCcCCcCCceEECCCCe-EEEEecCCCccEEEEEcC--CCC-eeeeeecceEEE---------eEeEEeCCCCEEEEEE
Confidence 111 235788886655 55553333 47888887 454 333322211111 1123555666777665
Q ss_pred CCC
Q psy17325 441 EGA 443 (461)
Q Consensus 441 ~~~ 443 (461)
...
T Consensus 399 ~~~ 401 (741)
T 2ecf_A 399 GIE 401 (741)
T ss_dssp CSS
T ss_pred eCC
Confidence 544
No 199
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=97.81 E-value=1.1e-05 Score=67.48 Aligned_cols=75 Identities=27% Similarity=0.637 Sum_probs=48.7
Q ss_pred cccCCCCCCCCCceeCC--CCceEeCCCCCeecCCCCcee-------------cCcceecCCccc--Ccee-------ec
Q psy17325 32 ECKHKFGLCSNTCHPTP--LGALCTCPPGEILSNDSVTCQ-------------DMNECEQPGYCS--QMCT-------NT 87 (461)
Q Consensus 32 ~C~~~~~~C~~~C~~~~--~~~~C~C~~G~~l~~~~~~C~-------------d~~eC~~~~~C~--~~C~-------~~ 87 (461)
+|..++..-...|++.. ++|.|.|++||. +..|+ ++++|. ...|. ..|. ++
T Consensus 2 ~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~----G~~C~~~~~~~~~~~~c~~~~~C~-~~~C~~~g~C~~~~~~~~~~ 76 (143)
T 4d90_A 2 ICDPNPCENGGICLPGLADGSFSCECPDGFT----DPNCSSVVEVASDEEEPTSAGPCT-PNPCHNGGTCEISEAYRGDT 76 (143)
T ss_dssp -CCSCCCGGGCEEEC-----CCEEECCTTCC----TTTTCSCCCCTTTTTSCCCCCTTS-SCCCCTTCEEEECCCEETTE
T ss_pred cCCCCcCCCCCEeeCCCCCCCEEeECCCCCC----CCCCccCccccccccccccCCcCC-CCCCCCCCEecCCCccccCC
Confidence 45444322234688765 689999999995 44554 345564 33454 3787 67
Q ss_pred cCCccccCCCCeeeeCCCCcee-eccccc
Q psy17325 88 KGSYICSCNEGYVLEYDNHTCK-AINHSA 115 (461)
Q Consensus 88 ~g~~~C~C~~g~~l~~~~~~C~-~~~~~~ 115 (461)
.++|.|.|++||. +..|. +++++.
T Consensus 77 ~~~~~C~C~~G~~----G~~C~~~i~~C~ 101 (143)
T 4d90_A 77 FIGYVCKCPRGFN----GIHCQHNINECE 101 (143)
T ss_dssp ECCEEEECCTTEE----STTSCEECCTTT
T ss_pred CCCeEeECcCCCc----CCCcccCCCcCC
Confidence 7899999999994 67785 777764
No 200
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.81 E-value=0.0047 Score=65.23 Aligned_cols=264 Identities=12% Similarity=0.077 Sum_probs=135.8
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCC---
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG--- 226 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG--- 226 (461)
.+..+++.+. +.+.++. .+.|.+.++.+.....+.... ..+..+++.|... +|+++. ...|+..++++
T Consensus 83 ~v~~~~~spd-~~~~~~~--~~~i~~~d~~~~~~~~l~~~~-~~~~~~~~SpdG~--~la~~~---~~~i~v~~~~~~~~ 153 (706)
T 2z3z_A 83 PSFRTLDAGR-GLVVLFT--QGGLVGFDMLARKVTYLFDTN-EETASLDFSPVGD--RVAYVR---NHNLYIARGGKLGE 153 (706)
T ss_dssp CCEEEEETTT-TEEEEEE--TTEEEEEETTTTEEEEEECCT-TCCTTCEECTTSS--EEEEEE---TTEEEEEECBCTTS
T ss_pred CceeEEECCC-CeEEEEE--CCEEEEEECCCCceEEccCCc-ccccCCcCCCCCC--EEEEEE---CCeEEEEecCcccc
Confidence 4667788776 6666653 389999998877655554432 4467789999866 777664 25788888876
Q ss_pred --CCcEEEEecccc--------------cceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCC
Q psy17325 227 --SNRSTIISTKIY--------------WPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN 290 (461)
Q Consensus 227 --~~~~~i~~~~~~--------------~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~ 290 (461)
.....+...... .+.++++.+.+++|+++......+.......... ....+ ..+.+-..+..
T Consensus 154 ~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~-~~~~~-~~~~y~~~g~~ 231 (706)
T 2z3z_A 154 GMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHP-LEAES-KPLYYPMAGTP 231 (706)
T ss_dssp CCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCS-SSCEE-EEECCCBTTSC
T ss_pred cCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCC-CCCce-EEeeCCCCCCC
Confidence 444333322111 2478899988888887752111000000000000 00000 00000000000
Q ss_pred CcceeeeEEeCCCCceEEEEeCC---e-eeeEEEeccCCeEEEeecCceeeEEEeecC-CCCceEEEeecCC-CeEEEee
Q psy17325 291 GVPLKIGKANMDGSNASILVSGQ---L-YEALALDLENGMLYYSTLKCTRWLFWTDWG-ENPRIERIGMDGS-NRSTIIS 364 (461)
Q Consensus 291 ~~~~~I~~~~~~g~~~~~l~~~~---~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~-~~~~I~~~~~dG~-~~~~l~~ 364 (461)
.-...|.+.++++.....+.... . +..+++.|.+..|+++... .. ....|...++++. ..+.+..
T Consensus 232 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~---------~~~~~~~v~~~d~~~g~~~~~~~~ 302 (706)
T 2z3z_A 232 SHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVN---------RAQNECKVNAYDAETGRFVRTLFV 302 (706)
T ss_dssp CCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEEC---------TTSCEEEEEEEETTTCCEEEEEEE
T ss_pred CCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeC---------CCCCeeEEEEEECCCCceeeEEEE
Confidence 00135777777766544433221 1 6788999888878775332 10 1235666676554 4444432
Q ss_pred -CCC---CCceeEEEec--CCCeEEEEcC-CCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEE
Q psy17325 365 -TKI---YWPNGLTLDI--ATRRVYFADS-KLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLY 437 (461)
Q Consensus 365 -~~l---~~p~glaiD~--~~~~ly~~d~-~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lY 437 (461)
..- ....++++.+ +++.||.++. +..+|+.++. +|.....+........ ..++++.+++.||
T Consensus 303 ~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~--~~~~~~~l~~~~~~v~---------~~~~~spdg~~l~ 371 (706)
T 2z3z_A 303 ETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDT--TGRLIRQVTKGEWEVT---------NFAGFDPKGTRLY 371 (706)
T ss_dssp EECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEET--TSCEEEECCCSSSCEE---------EEEEECTTSSEEE
T ss_pred ccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEEC--CCCEEEecCCCCeEEE---------eeeEEcCCCCEEE
Confidence 111 1236788876 5555554533 3357777776 5655443322111111 0134555566677
Q ss_pred EEeCCCc
Q psy17325 438 YSTEGAE 444 (461)
Q Consensus 438 wtd~~~~ 444 (461)
++....+
T Consensus 372 ~~~~~~~ 378 (706)
T 2z3z_A 372 FESTEAS 378 (706)
T ss_dssp EEESSSC
T ss_pred EEecCCC
Confidence 7665543
No 201
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.79 E-value=0.002 Score=62.26 Aligned_cols=227 Identities=8% Similarity=0.010 Sum_probs=114.4
Q ss_pred eeeeeeeecCCeEEEEeC--CCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCC
Q psy17325 151 VEGLAYDWIGGHIYWLDS--RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~--~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~ 228 (461)
+..+++.+.++.|+++.. +...|.+.++++.....+.........++++.|... +|+++. . ...|++.++++..
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~--~l~~~~-~-~~~l~~~d~~~~~ 113 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDER--AFFYVK-N-ELNLMKVDLETLE 113 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSS--EEEEEE-T-TTEEEEEETTTCC
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCC--EEEEEE-c-CCcEEEEECCCCC
Confidence 344566666777666543 345788889887766555433221122367888866 887776 2 2479999998766
Q ss_pred cEEEEecccc-cceeEEeeccCCeeEEecCCCce-eeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCce
Q psy17325 229 RSTIISTKIY-WPNGLTLDIATRRVYFADSKLDF-IDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306 (461)
Q Consensus 229 ~~~i~~~~~~-~P~glavD~~~~~ly~~d~~~~~-i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~ 306 (461)
.+.+...... .|. +..|+++...... ++... +....-.+.+++...........|++.++++...
T Consensus 114 ~~~~~~~~~~~~~~-------g~~l~~~~~~~~~~~~~~~------~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~ 180 (396)
T 3c5m_A 114 EQVIYTVDEEWKGY-------GTWVANSDCTKLVGIEILK------RDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGEL 180 (396)
T ss_dssp EEEEEECCTTEEEE-------EEEEECTTSSEEEEEEEEG------GGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCE
T ss_pred cEEEEecccccCCC-------CCEEEeccCCccccccccc------cccCCCCcceeeeeeccCCCcceEEEEECCCCcE
Confidence 5555442111 122 2222222110000 00000 0000000000000000000003577778776655
Q ss_pred EEEEeCCe-eeeEEEec-cCCeEEEeecCceeeEEEeecC-CCCceEEEeecCCCeEEEeeCC-CCCceeEEEecCCCeE
Q psy17325 307 SILVSGQL-YEALALDL-ENGMLYYSTLKCTRWLFWTDWG-ENPRIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRV 382 (461)
Q Consensus 307 ~~l~~~~~-p~~iavd~-~~~~lY~t~~~~~~~l~~~d~~-~~~~I~~~~~dG~~~~~l~~~~-l~~p~glaiD~~~~~l 382 (461)
+.+..... ...+++.| .++.|+++... .+. ...+|+..++++...+.+.... ...+..+++.+++++|
T Consensus 181 ~~~~~~~~~~~~~~~sp~dg~~l~~~~~~--------~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l 252 (396)
T 3c5m_A 181 EVIHQDTAWLGHPIYRPFDDSTVGFCHEG--------PHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAM 252 (396)
T ss_dssp EEEEEESSCEEEEEEETTEEEEEEEEECS--------CSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCE
T ss_pred EeeccCCcccccceECCCCCCEEEEEecC--------CCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEE
Confidence 55554333 66777877 55555554221 000 1157888888887766655321 2246678898877878
Q ss_pred EEEcC--CCCe--EEEEEecCCCCe
Q psy17325 383 YFADS--KLDF--IDFCNYDGTGRQ 403 (461)
Q Consensus 383 y~~d~--~~~~--I~~~~~~g~g~~ 403 (461)
+++.. .... |+.+++. +|..
T Consensus 253 ~~~~~~~~~~~~~l~~~d~~-~g~~ 276 (396)
T 3c5m_A 253 AYVSYFKGQTDRVIYKANPE-TLEN 276 (396)
T ss_dssp EEEEEETTTCCEEEEEECTT-TCCE
T ss_pred EEEecCCCCccceEEEEECC-CCCe
Confidence 77632 2334 8899883 3443
No 202
>2m0p_A Low-density lipoprotein receptor-related protein; complement type repeat, megalin, LDL receptor FAMI lipid binding protein; NMR {Homo sapiens}
Probab=97.78 E-value=2.7e-06 Score=56.82 Aligned_cols=26 Identities=38% Similarity=0.969 Sum_probs=23.7
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCCCCC
Q psy17325 2 ADRCVNLTKVCDGKTDCPNGADEGPGC 28 (461)
Q Consensus 2 ~~~Ci~~~~~Cd~~~dC~dg~de~~~C 28 (461)
+|+||+..|+|||..||.||+|| ..|
T Consensus 16 nG~CIp~~~~CDG~~DC~DgSDE-~~~ 41 (52)
T 2m0p_A 16 NHQCISKNWVCDTDNDCGDGSDE-KNC 41 (52)
T ss_dssp TCCEEETTSTTSSSCSSSSCHHH-HSC
T ss_pred CCCEEecCccCCCCCCCCCCCcc-ccc
Confidence 68999999999999999999999 445
No 203
>2kny_A LRP-1, linker, APO-E; lipoprotein receptor, ligand binding module, COMP repeat, calcium, cell membrane, coated PIT, cytoplasm, DEVE protein; NMR {Homo sapiens}
Probab=97.75 E-value=4.4e-06 Score=61.84 Aligned_cols=39 Identities=33% Similarity=0.559 Sum_probs=28.7
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCCC--CCC-CCcccCCCCCC
Q psy17325 2 ADRCVNLTKVCDGKTDCPNGADEGP--GCD-LAECKHKFGLC 40 (461)
Q Consensus 2 ~~~Ci~~~~~Cd~~~dC~dg~de~~--~C~-~~~C~~~~~~C 40 (461)
++.|||.+|+|||..||.||+||.. .|. ...|....++|
T Consensus 19 ~g~CIp~~~~CDg~~DC~DgsDE~~~~~C~~~~~C~~~~f~c 60 (80)
T 2kny_A 19 THVCVPERWLCDGDKDCADGADESIAAGCLYNSTGSGSGSGS 60 (80)
T ss_dssp SSCEEEHHHHTTSSCCSSSSTTTSGGGTCSSSSTTTTCSSCH
T ss_pred CCeEcChhhcCCCCCCCCCCCccccccCCCCCcccCcccchh
Confidence 4789999999999999999999953 343 23454444444
No 204
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.70 E-value=0.0067 Score=58.98 Aligned_cols=210 Identities=9% Similarity=0.044 Sum_probs=114.1
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCC----CcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecC
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENG----TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD 225 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G----~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~d 225 (461)
.+..+++.+.+..| ++-..++.|.+.+++. ......+.........+++.|..+ .++++- +....|...++.
T Consensus 69 ~v~~~~~s~~~~~l-~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--~~l~s~-~~dg~v~iwd~~ 144 (416)
T 2pm9_A 69 KFNDLDWSHNNKII-AGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQD--NVLASG-GNNGEIFIWDMN 144 (416)
T ss_dssp CEEEEEECSSSSCE-EEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSST--TBEEEE-CSSSCEEBCBTT
T ss_pred ceEEEEECCCCCeE-EEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCC--CEEEEE-cCCCeEEEEECC
Confidence 34566676544444 4444568899988776 323333333335678999998733 344443 344677777776
Q ss_pred CCC------cEEEE---ecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceee
Q psy17325 226 GSN------RSTII---STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI 296 (461)
Q Consensus 226 G~~------~~~i~---~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I 296 (461)
... ..... .........+++.+.++.++++-...+ .|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg----------------------------------~v 190 (416)
T 2pm9_A 145 KCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSN----------------------------------FA 190 (416)
T ss_dssp TTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSS----------------------------------CE
T ss_pred CCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCC----------------------------------CE
Confidence 543 11111 112335678888876455555544332 34
Q ss_pred eEEeCCCCceEEEEeC-------Ce-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCC-CeEEEee-CC
Q psy17325 297 GKANMDGSNASILVSG-------QL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGS-NRSTIIS-TK 366 (461)
Q Consensus 297 ~~~~~~g~~~~~l~~~-------~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~-~~~~l~~-~~ 366 (461)
...++........+.. .. +..+++.|.+..++++-... +..+.|...++... .....+. ..
T Consensus 191 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---------~~~~~i~~~d~~~~~~~~~~~~~~~ 261 (416)
T 2pm9_A 191 SIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGS---------DNDPSILIWDLRNANTPLQTLNQGH 261 (416)
T ss_dssp EEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECC---------SSSCCCCEEETTSTTSCSBCCCSCC
T ss_pred EEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECC---------CCCceEEEEeCCCCCCCcEEeecCc
Confidence 4555544333222222 12 78899998776555544330 01115555555432 2222222 23
Q ss_pred CCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEE
Q psy17325 367 IYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407 (461)
Q Consensus 367 l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~ 407 (461)
-.....|++.+.+++++++-...+.|...++. ++.....+
T Consensus 262 ~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~-~~~~~~~~ 301 (416)
T 2pm9_A 262 QKGILSLDWCHQDEHLLLSSGRDNTVLLWNPE-SAEQLSQF 301 (416)
T ss_dssp SSCEEEEEECSSCSSCEEEEESSSEEEEECSS-SCCEEEEE
T ss_pred cCceeEEEeCCCCCCeEEEEeCCCCEEEeeCC-CCccceee
Confidence 44577899987456655555667889888883 45543333
No 205
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=97.69 E-value=1.6e-05 Score=66.68 Aligned_cols=56 Identities=30% Similarity=0.635 Sum_probs=45.9
Q ss_pred CCCCCCCCCCC-CCCcccCCCCCCCCCc-eeCCCCceEeCCCCCeecCCCCceecCcce
Q psy17325 18 CPNGADEGPGC-DLAECKHKFGLCSNTC-HPTPLGALCTCPPGEILSNDSVTCQDMNEC 74 (461)
Q Consensus 18 C~dg~de~~~C-~~~~C~~~~~~C~~~C-~~~~~~~~C~C~~G~~l~~~~~~C~d~~eC 74 (461)
|+.|+. +..| +.++|...+..|.+.| .+++++|.|.|++||.+..++.+|++++++
T Consensus 73 C~~G~~-G~~C~~~deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy~l~~dG~~C~~~~~~ 130 (146)
T 1x7a_L 73 CQVGFE-GKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPAVPF 130 (146)
T ss_dssp CCSSEE-STTTCEECCTTSGGGSCSSBCCCCSSSCCCCBCCTTEEECTTSSSEEECSSS
T ss_pred cCCCCc-CCcCCCCccccCCCCCCcCCCCCCCCCCEEeEcCCCcEeCCCCCcCCCCCCC
Confidence 444543 3567 3578988778899999 999999999999999998889999988764
No 206
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=97.69 E-value=2.2e-05 Score=58.84 Aligned_cols=47 Identities=38% Similarity=0.948 Sum_probs=39.8
Q ss_pred ceecCcceecCCcccC-ceeeccCCccccCCCCeeeeCCCCceeeccccc
Q psy17325 67 TCQDMNECEQPGYCSQ-MCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA 115 (461)
Q Consensus 67 ~C~d~~eC~~~~~C~~-~C~~~~g~~~C~C~~g~~l~~~~~~C~~~~~~~ 115 (461)
+|+|++||..+..|.+ .|.++.++|.|.|++||.+ ++..|.+++++.
T Consensus 1 sC~dideC~~~~~C~~g~C~n~~g~y~C~C~~Gy~~--~g~~C~dideC~ 48 (82)
T 1emn_A 1 SAVDMDECKEPDVCKHGQCINTDGSYRCECPFGYIL--AGNECVDTDECS 48 (82)
T ss_dssp CCCCCCSSSSTTSCSSSEECCCSSCCCEECCTTEEE--ETTEEEECCGGG
T ss_pred CCCccccCCCCCCcCCCEEEecCCCEEEECCCCeEC--CCCccCCccccc
Confidence 4789999976567865 8999999999999999987 467899888875
No 207
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.67 E-value=0.011 Score=56.76 Aligned_cols=204 Identities=12% Similarity=0.073 Sum_probs=111.1
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCc
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~ 229 (461)
.+..+++.+.+ +..++-...+.|.+.++........+.........+++.+... .++.+- +....|...++.....
T Consensus 141 ~V~~v~~spdg-~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~--~~~~s~-~~dg~v~~wd~~~~~~ 216 (357)
T 4g56_B 141 IVKTLSVFSDG-TQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKD--TIFLSC-GEDGRILLWDTRKPKP 216 (357)
T ss_dssp CEEEEEECSSS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCS--SCEEEE-ETTSCEEECCTTSSSC
T ss_pred CEEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCC--ceeeee-ccCCceEEEECCCCce
Confidence 35667777644 4445556678899999876655544544445678899988755 566655 4456777766653322
Q ss_pred EEEEe--cccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCC-Cce
Q psy17325 230 STIIS--TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG-SNA 306 (461)
Q Consensus 230 ~~i~~--~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g-~~~ 306 (461)
..... ..-..+..+++.+.++.++.+-.... .|...++.. ...
T Consensus 217 ~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~----------------------------------~i~~wd~~~~~~~ 262 (357)
T 4g56_B 217 ATRIDFCASDTIPTSVTWHPEKDDTFACGDETG----------------------------------NVSLVNIKNPDSA 262 (357)
T ss_dssp BCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS----------------------------------CEEEEESSCGGGC
T ss_pred eeeeeeccccccccchhhhhcccceEEEeeccc----------------------------------ceeEEECCCCcEe
Confidence 11111 12234677888877666665433332 244444332 222
Q ss_pred EEEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEE
Q psy17325 307 SILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385 (461)
Q Consensus 307 ~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~ 385 (461)
..+..... ...|++.|.++.+..+-.. .+.|...+++........ ..-...++|++.|.+++++.+
T Consensus 263 ~~~~~~~~~v~~l~~sp~~~~~lasgs~------------D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s 329 (357)
T 4g56_B 263 QTSAVHSQNITGLAYSYHSSPFLASISE------------DCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTT 329 (357)
T ss_dssp EEECCCSSCEEEEEECSSSSCCEEEEET------------TSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEE
T ss_pred EEEeccceeEEEEEEcCCCCCEEEEEeC------------CCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEE
Confidence 23222112 6788888877655544333 344554454433222222 233457789998766666666
Q ss_pred cCCCCeEEEEEecCCCCeE
Q psy17325 386 DSKLDFIDFCNYDGTGRQQ 404 (461)
Q Consensus 386 d~~~~~I~~~~~~g~g~~~ 404 (461)
-...++|..-++...|...
T Consensus 330 ~s~Dg~v~iW~~~~~~~~~ 348 (357)
T 4g56_B 330 VGWDHKVLHHHLPSEGRTE 348 (357)
T ss_dssp EETTSCEEEEECC------
T ss_pred EcCCCeEEEEECCCCCccc
Confidence 5556777777774345443
No 208
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.65 E-value=0.0025 Score=60.15 Aligned_cols=185 Identities=14% Similarity=0.199 Sum_probs=100.1
Q ss_pred eeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEE
Q psy17325 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRST 231 (461)
Q Consensus 152 ~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~ 231 (461)
..+++| ..++||+.... |.+.+.+|.......... ......+++ .+ .||+.. ....|++.+.+|...-.
T Consensus 63 ~~~~~~-~~g~l~v~t~~---l~~~d~~g~~~~~~~~~~-~~~~~~~~~--~~--~l~v~t--~~~~l~~~d~~g~~~~~ 131 (330)
T 3hxj_A 63 CRPSIG-KDGTIYFGSDK---VYAINPDGTEKWRFDTKK-AIVSDFTIF--ED--ILYVTS--MDGHLYAINTDGTEKWR 131 (330)
T ss_dssp ECCEET-TTTEECCSSCE---EEEECCCGGGGGGSCC------CCEEEE--TT--EEEEEC--TTSEEEEECTTSCEEEE
T ss_pred cceEEe-cCCcEEEecCc---EEEECCCCcEEEEEECCC-CcccCceEE--CC--EEEEEe--cCCEEEEEcCCCCEEEE
Confidence 345555 25677765433 888887765422111111 112234454 56 788765 24688888888543222
Q ss_pred EEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEe
Q psy17325 232 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVS 311 (461)
Q Consensus 232 i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~ 311 (461)
. .........+++|. .++||++.... .|.+.+.+|........
T Consensus 132 ~-~~~~~~~~~~~~~~-~g~l~vgt~~~-----------------------------------~l~~~d~~g~~~~~~~~ 174 (330)
T 3hxj_A 132 F-KTKKAIYATPIVSE-DGTIYVGSNDN-----------------------------------YLYAINPDGTEKWRFKT 174 (330)
T ss_dssp E-ECSSCCCSCCEECT-TSCEEEECTTS-----------------------------------EEEEECTTSCEEEEEEC
T ss_pred E-cCCCceeeeeEEcC-CCEEEEEcCCC-----------------------------------EEEEECCCCCEeEEEec
Confidence 2 22222334566764 56677765432 36666666443322222
Q ss_pred CCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCC
Q psy17325 312 GQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLD 390 (461)
Q Consensus 312 ~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~ 390 (461)
... ...+++|. ++.||++. + .|++.+.+|....... .....+.++++| .+++||++.. .+
T Consensus 175 ~~~~~~~~~~d~-~g~l~v~t-~--------------~l~~~d~~g~~~~~~~-~~~~~~~~~~~~-~~g~l~v~t~-~~ 235 (330)
T 3hxj_A 175 NDAITSAASIGK-DGTIYFGS-D--------------KVYAINPDGTEKWNFY-AGYWTVTRPAIS-EDGTIYVTSL-DG 235 (330)
T ss_dssp SSCCCSCCEECT-TCCEEEES-S--------------SEEEECTTSCEEEEEC-CSSCCCSCCEEC-TTSCEEEEET-TT
T ss_pred CCCceeeeEEcC-CCEEEEEe-C--------------EEEEECCCCcEEEEEc-cCCcceeceEEC-CCCeEEEEcC-CC
Confidence 122 56677774 67788765 3 5666664444332222 233457788887 5678998854 46
Q ss_pred eEEEEEecCCCCeEE
Q psy17325 391 FIDFCNYDGTGRQQV 405 (461)
Q Consensus 391 ~I~~~~~~g~g~~~~ 405 (461)
.|.+++. +|....
T Consensus 236 gl~~~~~--~g~~~~ 248 (330)
T 3hxj_A 236 HLYAINP--DGTEKW 248 (330)
T ss_dssp EEEEECT--TSCEEE
T ss_pred eEEEECC--CCCEeE
Confidence 7888876 666543
No 209
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=97.63 E-value=2.5e-05 Score=59.08 Aligned_cols=52 Identities=37% Similarity=0.818 Sum_probs=41.7
Q ss_pred CCCCCCC----CCCCC-CCCcccCCCCCCC-CCceeCCCCceEeCCCCCeecCCCCce
Q psy17325 17 DCPNGAD----EGPGC-DLAECKHKFGLCS-NTCHPTPLGALCTCPPGEILSNDSVTC 68 (461)
Q Consensus 17 dC~dg~d----e~~~C-~~~~C~~~~~~C~-~~C~~~~~~~~C~C~~G~~l~~~~~~C 68 (461)
.|+.|+. .+..| +++||...+..|. ..|.+++++|.|.|++||.+..++++|
T Consensus 28 ~C~~Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~~~~C 85 (86)
T 1lmj_A 28 KCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISAC 85 (86)
T ss_dssp CCCSSEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSSSCCC
T ss_pred eCCCCcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccCCCCCcc
Confidence 4676663 24667 6899988777786 579999999999999999987777776
No 210
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.62 E-value=0.063 Score=53.08 Aligned_cols=162 Identities=10% Similarity=0.041 Sum_probs=91.2
Q ss_pred CceeEEEcCCCCceEEEEeecCCCCcEEEEecC--C-CCcEEEEe-cccccceeEEeeccCCeeEEecCCCceeeecccc
Q psy17325 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD--G-SNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268 (461)
Q Consensus 193 ~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~d--G-~~~~~i~~-~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~ 268 (461)
...++++.|... +|+.+- +....|...++. . .....+.. ..-..+..|++.+.+..|+.++...
T Consensus 104 ~v~~~~~s~d~~--~l~~~~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g--------- 171 (450)
T 2vdu_B 104 YIRNLRLTSDES--RLIACA-DSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFG--------- 171 (450)
T ss_dssp CEEEEEECTTSS--EEEEEE-GGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTS---------
T ss_pred ceEEEEEcCCCC--EEEEEE-CCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCC---------
Confidence 467899999866 775554 334566666665 3 33333322 2234678999998888888776532
Q ss_pred eeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCce-E----EEEe-CCeeeeEEEecc--CCeEEEeecCceeeEEE
Q psy17325 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA-S----ILVS-GQLYEALALDLE--NGMLYYSTLKCTRWLFW 340 (461)
Q Consensus 269 ~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~-~----~l~~-~~~p~~iavd~~--~~~lY~t~~~~~~~l~~ 340 (461)
.|...++..... . .+.. ...+..|++.|. .+.+.++-..
T Consensus 172 --------------------------~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~------- 218 (450)
T 2vdu_B 172 --------------------------DVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDR------- 218 (450)
T ss_dssp --------------------------EEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEET-------
T ss_pred --------------------------cEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcC-------
Confidence 244444332211 1 1111 112778889886 1433333332
Q ss_pred eecCCCCceEEEeecC-CCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEE
Q psy17325 341 TDWGENPRIERIGMDG-SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407 (461)
Q Consensus 341 ~d~~~~~~I~~~~~dG-~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~ 407 (461)
.+.|...++.. .....+....-..+..+++. .+..|+.+ ...+.|...++. +|.....+
T Consensus 219 -----d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~-~~d~~v~vwd~~-~~~~~~~~ 278 (450)
T 2vdu_B 219 -----DEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSA-GGDDKIFAWDWK-TGKNLSTF 278 (450)
T ss_dssp -----TSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEE-ESSSEEEEEETT-TCCEEEEE
T ss_pred -----CCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEE-eCCCeEEEEECC-CCcEeeee
Confidence 34555555543 33333332444567889997 55555544 566789999983 56554443
No 211
>2i1p_A Low-density lipoprotein receptor-related protein 2; cysteine-rich repeat, ligand binding domain, calcium CAGE, ligand binding protein; NMR {Rattus norvegicus}
Probab=97.61 E-value=6e-06 Score=54.71 Aligned_cols=27 Identities=41% Similarity=0.935 Sum_probs=23.6
Q ss_pred CC-ccCCCCCCCCCCCCCCCCCCCCCCCC
Q psy17325 2 AD-RCVNLTKVCDGKTDCPNGADEGPGCD 29 (461)
Q Consensus 2 ~~-~Ci~~~~~Cd~~~dC~dg~de~~~C~ 29 (461)
++ +||+.+|+|||..||.||||| ..|.
T Consensus 16 ~g~~CI~~~~~CDG~~DC~DgSDE-~~C~ 43 (48)
T 2i1p_A 16 DGSSCINSRYRCDGVYDCRDNSDE-AGCP 43 (48)
T ss_dssp SSSCEECGGGSSSSSCCSSSSHHH-HSSC
T ss_pred CCCEeCCHhhcCCCCCCCCCCccc-ccCC
Confidence 45 799999999999999999999 4563
No 212
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.59 E-value=0.0067 Score=58.40 Aligned_cols=194 Identities=6% Similarity=-0.039 Sum_probs=100.2
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEE----EecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCC
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV----LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~----l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG 226 (461)
+..+++.+. +.+. +-...+.|.+.++....... ...+.-.....|++.|... +|.... ....|...++..
T Consensus 97 V~~~~~s~d-~~~l-~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~--~l~sgs--~dg~v~iwd~~~ 170 (357)
T 4g56_B 97 VTDVAWVSE-KGIL-VASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGT--QAVSGG--KDFSVKVWDLSQ 170 (357)
T ss_dssp EEEEEEETT-TEEE-EEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSS--EEEEEE--TTSCEEEEETTT
T ss_pred EEEEEEcCC-CCEE-EEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCC--EEEEEe--CCCeEEEEECCC
Confidence 455666543 3443 44556788887764332111 1112223467899998755 665544 345677777764
Q ss_pred CCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCce
Q psy17325 227 SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306 (461)
Q Consensus 227 ~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~ 306 (461)
......+.........+++.+.++.++.+-...+. |...++.....
T Consensus 171 ~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~----------------------------------v~~wd~~~~~~ 216 (357)
T 4g56_B 171 KAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGR----------------------------------ILLWDTRKPKP 216 (357)
T ss_dssp TEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSC----------------------------------EEECCTTSSSC
T ss_pred CcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCc----------------------------------eEEEECCCCce
Confidence 33333333334456778887766666655444332 33333322211
Q ss_pred -EEEEeC---CeeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecC-CCeEEEeeCCCCCceeEEEecCCCe
Q psy17325 307 -SILVSG---QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG-SNRSTIISTKIYWPNGLTLDIATRR 381 (461)
Q Consensus 307 -~~l~~~---~~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG-~~~~~l~~~~l~~p~glaiD~~~~~ 381 (461)
..+... ..+..+++.|.++.++.+-.. .+.|...++.. .....+. ..-.....|++.+.+++
T Consensus 217 ~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~------------d~~i~~wd~~~~~~~~~~~-~~~~~v~~l~~sp~~~~ 283 (357)
T 4g56_B 217 ATRIDFCASDTIPTSVTWHPEKDDTFACGDE------------TGNVSLVNIKNPDSAQTSA-VHSQNITGLAYSYHSSP 283 (357)
T ss_dssp BCBCCCTTCCSCEEEEEECTTSTTEEEEEES------------SSCEEEEESSCGGGCEEEC-CCSSCEEEEEECSSSSC
T ss_pred eeeeeeccccccccchhhhhcccceEEEeec------------ccceeEEECCCCcEeEEEe-ccceeEEEEEEcCCCCC
Confidence 111110 116788888887776665433 34455555432 2223332 33445678888876666
Q ss_pred EEEEcCCCCeEEEEEe
Q psy17325 382 VYFADSKLDFIDFCNY 397 (461)
Q Consensus 382 ly~~d~~~~~I~~~~~ 397 (461)
+..+-...+.|...++
T Consensus 284 ~lasgs~D~~i~iwd~ 299 (357)
T 4g56_B 284 FLASISEDCTVAVLDA 299 (357)
T ss_dssp CEEEEETTSCEEEECT
T ss_pred EEEEEeCCCEEEEEEC
Confidence 6555455577888887
No 213
>1j8e_A Low-density lipoprotein receptor-related protein 1; ligand binding, calcium binding, complement-like repeat, LRP receptor, signaling protein; 1.85A {Homo sapiens} SCOP: g.12.1.1
Probab=97.59 E-value=1e-05 Score=52.51 Aligned_cols=24 Identities=38% Similarity=0.804 Sum_probs=22.5
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCC
Q psy17325 2 ADRCVNLTKVCDGKTDCPNGADEG 25 (461)
Q Consensus 2 ~~~Ci~~~~~Cd~~~dC~dg~de~ 25 (461)
+++||+..|+|||..||.||+||.
T Consensus 14 ~g~CI~~~~~CDg~~DC~DgSDE~ 37 (44)
T 1j8e_A 14 SGRCIPEHWTCDGDNDCGDYSDET 37 (44)
T ss_dssp TSCEEEGGGTTSSSCCSSSSGGGS
T ss_pred CCCeEecCcccCCCCCCCCCCCCC
Confidence 578999999999999999999994
No 214
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.54 E-value=0.027 Score=54.80 Aligned_cols=222 Identities=8% Similarity=0.010 Sum_probs=114.2
Q ss_pred EEEEeCCCCeEEEEeCCCCcEE----EEecCCCCCceeEEEcC-CCCceEEEEeecCCCCcEEEEecCCC-------CcE
Q psy17325 163 IYWLDSRLNRIEVCDENGTNRI----VLAKDNITQPRGMMLDP-SPGTRWLFWTDWGENPRIERIGMDGS-------NRS 230 (461)
Q Consensus 163 ly~~d~~~~~I~~~~~~G~~~~----~l~~~~~~~p~~ia~d~-~~g~~~ly~td~~~~~~I~~~~~dG~-------~~~ 230 (461)
+.++-...+.|.+.+++..... ..+...-.....+++.| ... .|+.+. ....|...++... ...
T Consensus 49 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~--~l~s~s--~dg~v~vw~~~~~~~~~~~~~~~ 124 (402)
T 2aq5_A 49 LICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDN--VIASGS--EDCTVMVWEIPDGGLVLPLREPV 124 (402)
T ss_dssp EEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTT--EEEEEE--TTSEEEEEECCTTCCSSCBCSCS
T ss_pred EEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCC--EEEEEe--CCCeEEEEEccCCCCccccCCce
Confidence 3444455677777776543221 11222334578899998 544 555444 3456777776543 122
Q ss_pred EEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEE
Q psy17325 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310 (461)
Q Consensus 231 ~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~ 310 (461)
..+.........|++.+.+++++++-...+ .|...++........+
T Consensus 125 ~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg----------------------------------~i~iwd~~~~~~~~~~ 170 (402)
T 2aq5_A 125 ITLEGHTKRVGIVAWHPTAQNVLLSAGCDN----------------------------------VILVWDVGTGAAVLTL 170 (402)
T ss_dssp EEEECCSSCEEEEEECSSBTTEEEEEETTS----------------------------------CEEEEETTTTEEEEEE
T ss_pred EEecCCCCeEEEEEECcCCCCEEEEEcCCC----------------------------------EEEEEECCCCCccEEE
Confidence 223333456778899887655554433332 3555555544333333
Q ss_pred --eCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCC-eEEE-eeCCCCCceeEEEecCCCeEEE
Q psy17325 311 --SGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSN-RSTI-ISTKIYWPNGLTLDIATRRVYF 384 (461)
Q Consensus 311 --~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~-~~~l-~~~~l~~p~glaiD~~~~~ly~ 384 (461)
.... ...+++.|.+..|+.+.. .+.|...++.... ...+ ....-..+..+++.+. ++++.
T Consensus 171 ~~~~~~~~v~~~~~~~~~~~l~~~~~-------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ 236 (402)
T 2aq5_A 171 GPDVHPDTIYSVDWSRDGALICTSCR-------------DKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSE-GKILT 236 (402)
T ss_dssp CTTTCCSCEEEEEECTTSSCEEEEET-------------TSEEEEEETTTTEEEEEEECSSCSSSCCEEEECST-TEEEE
T ss_pred ecCCCCCceEEEEECCCCCEEEEEec-------------CCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCC-CcEEE
Confidence 1111 788999986665554433 3455555554322 2222 1122223678888754 55555
Q ss_pred Ec---CCCCeEEEEEecCCCCe-EEEEE-ccccceeeccCCCCCcceEEEeeeCCEEEEEeCCCceee
Q psy17325 385 AD---SKLDFIDFCNYDGTGRQ-QVILI-DLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447 (461)
Q Consensus 385 ~d---~~~~~I~~~~~~g~g~~-~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~~~~~i~ 447 (461)
+- ...+.|...++. ++.. ..... ...... ..++++.++..||++-...+.|+
T Consensus 237 ~g~~~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~v----------~~~~~s~~~~~l~~~g~~dg~i~ 293 (402)
T 2aq5_A 237 TGFSRMSERQVALWDTK-HLEEPLSLQELDTSSGV----------LLPFFDPDTNIVYLCGKGDSSIR 293 (402)
T ss_dssp EEECTTCCEEEEEEETT-BCSSCSEEEECCCCSSC----------EEEEEETTTTEEEEEETTCSCEE
T ss_pred EeccCCCCceEEEEcCc-cccCCceEEeccCCCce----------eEEEEcCCCCEEEEEEcCCCeEE
Confidence 54 456788888883 2332 11111 111111 12344445667777766666554
No 215
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.53 E-value=0.005 Score=63.46 Aligned_cols=193 Identities=10% Similarity=-0.033 Sum_probs=112.4
Q ss_pred eeeeeeeecCCeEEEEeC--CC--CeEEEEeC--CCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEec
Q psy17325 151 VEGLAYDWIGGHIYWLDS--RL--NRIEVCDE--NGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGM 224 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~--~~--~~I~~~~~--~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~ 224 (461)
...+++.+. +.+|+++. +. .+|...++ +|... .+... .....+++.|... ..+|.+. .. ..+...++
T Consensus 67 ~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~--~~~~~~~~s~dg~-~~~~~s~-~~-~~~~l~d~ 139 (582)
T 3o4h_A 67 VLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAV--KPMRILSGVDTGE-AVVFTGA-TE-DRVALYAL 139 (582)
T ss_dssp ECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTS--CSBEEEEEEECSS-CEEEEEE-CS-SCEEEEEE
T ss_pred cccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-cccCC--CCceeeeeCCCCC-eEEEEec-CC-CCceEEEc
Confidence 344555444 56788875 22 36778888 77765 33221 2234456655543 1345444 22 33445577
Q ss_pred CCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCC
Q psy17325 225 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304 (461)
Q Consensus 225 dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~ 304 (461)
++...+.+..... ..+++++.++.|+++....+.- ..|++.++++.
T Consensus 140 ~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~-------------------------------~~i~~~d~~~g 185 (582)
T 3o4h_A 140 DGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGR-------------------------------VSLFTSNLSSG 185 (582)
T ss_dssp ETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTE-------------------------------EEEEEEETTTC
T ss_pred cCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCC-------------------------------eEEEEEcCCCC
Confidence 7655554543321 6888999888888654331100 24777887766
Q ss_pred ceEEEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEE--------E
Q psy17325 305 NASILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLT--------L 375 (461)
Q Consensus 305 ~~~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~gla--------i 375 (461)
..+.+..... ...+++.|.+..|+.++.. ....|++.++++...+ ++...-..+.+++ +
T Consensus 186 ~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~-----------~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 253 (582)
T 3o4h_A 186 GLRVFDSGEGSFSSASISPGMKVTAGLETA-----------REARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGY 253 (582)
T ss_dssp CCEEECCSSCEEEEEEECTTSCEEEEEECS-----------SCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEE
T ss_pred CceEeecCCCccccceECCCCCEEEEccCC-----------CeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeE
Confidence 6665544333 7889999988888743332 1247888888887766 4423333344555 8
Q ss_pred ecCCCeEEEEcCCCCeEEEEEe
Q psy17325 376 DIATRRVYFADSKLDFIDFCNY 397 (461)
Q Consensus 376 D~~~~~ly~~d~~~~~I~~~~~ 397 (461)
++++ +||++-...+++....+
T Consensus 254 spdg-~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 254 LPDG-RLAVVARREGRSAVFID 274 (582)
T ss_dssp CTTS-CEEEEEEETTEEEEEET
T ss_pred cCCC-cEEEEEEcCCcEEEEEE
Confidence 8666 77776555555555554
No 216
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=97.53 E-value=4.7e-05 Score=60.10 Aligned_cols=49 Identities=31% Similarity=0.682 Sum_probs=38.2
Q ss_pred CCceecCcceec-CCcccCceeeccCCccccCCCCeeeeCCCCceeeccccc
Q psy17325 65 SVTCQDMNECEQ-PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA 115 (461)
Q Consensus 65 ~~~C~d~~eC~~-~~~C~~~C~~~~g~~~C~C~~g~~l~~~~~~C~~~~~~~ 115 (461)
+..| +++||.. ++.|++.|.++.++|.|.|++||.+. ++..|.+++++.
T Consensus 24 ~~~C-d~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy~g~-~g~~C~dideC~ 73 (107)
T 2w2n_E 24 QGAM-GTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLV-AQRRCEDIDECQ 73 (107)
T ss_dssp SCCB-SCCGGGTGGGGCSSEEECCSBSCEEECCTTCEEE-TTTEEEC-----
T ss_pred CCCC-cCccCcCCCCCCCCEeEeCCCCeEEECCCCcccc-CCCccccccccC
Confidence 4568 7999985 46899999999999999999999986 568899998875
No 217
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=97.52 E-value=8.2e-05 Score=59.49 Aligned_cols=55 Identities=29% Similarity=0.642 Sum_probs=42.9
Q ss_pred CCCCCCCCCCCC----CCcccCCCCCCCCCceeCCCCceEeCCCCCeecCCCCceecCcc
Q psy17325 18 CPNGADEGPGCD----LAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73 (461)
Q Consensus 18 C~dg~de~~~C~----~~~C~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~d~~e 73 (461)
|+.|+ ++..|. .++|...+..|.+.|.++.++|.|.|++||.+..+++.|+++.+
T Consensus 39 C~~G~-~G~~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~~~~~g~~C~~~~~ 97 (114)
T 1aut_L 39 CRSGW-EGRFCQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVK 97 (114)
T ss_dssp ECTTE-ESTTSCEECCSSSSSSGGGGCSSEEEECSSSEEEECCTTEEECTTSSCEEECSS
T ss_pred CCCCC-cCCCcCcCCcCCcCcCCCCCCCCEeECCCCCEEeECCCCeeECCCCCccCcCcc
Confidence 44444 234563 34788777889999999999999999999999888999987643
No 218
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.52 E-value=0.017 Score=64.07 Aligned_cols=150 Identities=13% Similarity=0.063 Sum_probs=93.1
Q ss_pred eeeeeeecCCeEEEEeCCCCeEE-EEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcE
Q psy17325 152 EGLAYDWIGGHIYWLDSRLNRIE-VCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS 230 (461)
Q Consensus 152 ~~iavd~~~~~ly~~d~~~~~I~-~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~ 230 (461)
..+++. .++.|+++.. ..+|. +.++++.....+. .....+..+++.|... +|+++. ....|+..++.+....
T Consensus 341 ~~~~~s-dg~~l~~~s~-~~~l~~~~d~~~~~~~~l~-~~~~~~~~~~~SpDG~--~la~~~--~~~~v~~~d~~tg~~~ 413 (1045)
T 1k32_A 341 VRRGGD-TKVAFIHGTR-EGDFLGIYDYRTGKAEKFE-ENLGNVFAMGVDRNGK--FAVVAN--DRFEIMTVDLETGKPT 413 (1045)
T ss_dssp EEECSS-SEEEEEEEET-TEEEEEEEETTTCCEEECC-CCCCSEEEEEECTTSS--EEEEEE--TTSEEEEEETTTCCEE
T ss_pred EeeeEc-CCCeEEEEEC-CCceEEEEECCCCCceEec-CCccceeeeEECCCCC--EEEEEC--CCCeEEEEECCCCceE
Confidence 344444 3445665554 56788 8888877665555 3335688999999866 787766 2358999999866655
Q ss_pred EEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEE
Q psy17325 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310 (461)
Q Consensus 231 ~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~ 310 (461)
.+..........+++.+.++.|.++....+.-. ...-...|.+.++++.....+.
T Consensus 414 ~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~-------------------------~~~~~~~i~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 414 VIERSREAMITDFTISDNSRFIAYGFPLKHGET-------------------------DGYVMQAIHVYDMEGRKIFAAT 468 (1045)
T ss_dssp EEEECSSSCCCCEEECTTSCEEEEEEEECSSTT-------------------------CSCCEEEEEEEETTTTEEEECS
T ss_pred EeccCCCCCccceEECCCCCeEEEEecCccccc-------------------------cCCCCCeEEEEECCCCcEEEee
Confidence 555443444578999988888877643210000 0000035677777765433333
Q ss_pred eCCe-eeeEEEeccCCeEEEeecC
Q psy17325 311 SGQL-YEALALDLENGMLYYSTLK 333 (461)
Q Consensus 311 ~~~~-p~~iavd~~~~~lY~t~~~ 333 (461)
.... +..+++.|.+..|||+...
T Consensus 469 ~~~~~~~~~~~spdG~~l~~~s~~ 492 (1045)
T 1k32_A 469 TENSHDYAPAFDADSKNLYYLSYR 492 (1045)
T ss_dssp CSSSBEEEEEECTTSCEEEEEESC
T ss_pred CCCcccCCceEcCCCCEEEEEecc
Confidence 3222 6778899999999987653
No 219
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.51 E-value=0.0023 Score=61.92 Aligned_cols=193 Identities=11% Similarity=-0.005 Sum_probs=105.2
Q ss_pred CCCeEEEEeCCCCcEEEEecCCCCCceeEEEcC-CCCceEEEEeecCCC----CcEEEEecCCCCcEEEEecc-ccccee
Q psy17325 169 RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDP-SPGTRWLFWTDWGEN----PRIERIGMDGSNRSTIISTK-IYWPNG 242 (461)
Q Consensus 169 ~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~-~~g~~~ly~td~~~~----~~I~~~~~dG~~~~~i~~~~-~~~P~g 242 (461)
....|.+.++++.....+... ......+++.| ..+ .|+++.-+.. .+|+.+++++...+.+.... ...+..
T Consensus 166 ~~~~l~~~d~~~g~~~~~~~~-~~~~~~~~~sp~dg~--~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~ 242 (396)
T 3c5m_A 166 PTCRLIKVDIETGELEVIHQD-TAWLGHPIYRPFDDS--TVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTH 242 (396)
T ss_dssp CCEEEEEEETTTCCEEEEEEE-SSCEEEEEEETTEEE--EEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEE
T ss_pred CcceEEEEECCCCcEEeeccC-CcccccceECCCCCC--EEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccc
Confidence 345677788776555544432 23467788888 433 4555431332 57999999887655554321 224667
Q ss_pred EEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCeeeeEEEec
Q psy17325 243 LTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQLYEALALDL 322 (461)
Q Consensus 243 lavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~p~~iavd~ 322 (461)
+++.+.++.|+++....+.- ...|++.++.+...+.+....... +++.|
T Consensus 243 ~~~spdg~~l~~~~~~~~~~------------------------------~~~l~~~d~~~g~~~~l~~~~~~~-~~~s~ 291 (396)
T 3c5m_A 243 EFWIPDGSAMAYVSYFKGQT------------------------------DRVIYKANPETLENEEVMVMPPCS-HLMSN 291 (396)
T ss_dssp EEECTTSSCEEEEEEETTTC------------------------------CEEEEEECTTTCCEEEEEECCSEE-EEEEC
T ss_pred eEECCCCCEEEEEecCCCCc------------------------------cceEEEEECCCCCeEEeeeCCCCC-CCccC
Confidence 78888788777764321100 013677777655544444321112 55666
Q ss_pred -cCCeEEEeecCceeeEEEee-----cCCCCceEEEeecCCCeEEEeeCCCC----------CceeEEEecCCCeEEEEc
Q psy17325 323 -ENGMLYYSTLKCTRWLFWTD-----WGENPRIERIGMDGSNRSTIISTKIY----------WPNGLTLDIATRRVYFAD 386 (461)
Q Consensus 323 -~~~~lY~t~~~~~~~l~~~d-----~~~~~~I~~~~~dG~~~~~l~~~~l~----------~p~glaiD~~~~~ly~~d 386 (461)
.+..|+++... .. +...+ ......|+..++++...+.+...... .+..+++.+++++|+++.
T Consensus 292 ~dg~~l~~~~~~-~p-~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s 369 (396)
T 3c5m_A 292 FDGSLMVGDGCD-AP-VDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTS 369 (396)
T ss_dssp SSSSEEEEEECC-C-----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEE
T ss_pred CCCceEEEecCC-cc-eeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEe
Confidence 44433332110 00 00000 01246788888876665555433221 145678887888888875
Q ss_pred CC--CCeEEEEEe
Q psy17325 387 SK--LDFIDFCNY 397 (461)
Q Consensus 387 ~~--~~~I~~~~~ 397 (461)
.. ...|+.+++
T Consensus 370 ~~~~~~~l~~~~~ 382 (396)
T 3c5m_A 370 DFEGVPAIYIADV 382 (396)
T ss_dssp CTTSSCEEEEEEC
T ss_pred cCCCCceEEEEEE
Confidence 43 346888888
No 220
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.50 E-value=0.13 Score=54.84 Aligned_cols=201 Identities=11% Similarity=0.080 Sum_probs=117.4
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCc
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~ 229 (461)
.+.++++.+.+..|..+. .++.|.+.+.........+...-.....+++.|... +|..+. ....|...++.....
T Consensus 15 ~v~~i~~sp~~~~la~~~-~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~~--~dg~i~vw~~~~~~~ 89 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTL-YSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKN--WIIVGS--DDFRIRVFNYNTGEK 89 (814)
T ss_dssp CEEEEEECSSSSEEEEEE-TTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGT--EEEEEE--TTSEEEEEETTTCCE
T ss_pred ceEEEEECCCCCEEEEEe-CCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCC--EEEEEe--CCCeEEEEECCCCcE
Confidence 466778877666565554 468899999655443333333335678999999866 777665 356788888775444
Q ss_pred EEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCC-ceEE
Q psy17325 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS-NASI 308 (461)
Q Consensus 230 ~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~-~~~~ 308 (461)
...+.........+++.+.+..|+.+.... .|...+++.. ....
T Consensus 90 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-----------------------------------~i~vw~~~~~~~~~~ 134 (814)
T 3mkq_A 90 VVDFEAHPDYIRSIAVHPTKPYVLSGSDDL-----------------------------------TVKLWNWENNWALEQ 134 (814)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEEEEETTS-----------------------------------EEEEEEGGGTSEEEE
T ss_pred EEEEecCCCCEEEEEEeCCCCEEEEEcCCC-----------------------------------EEEEEECCCCceEEE
Confidence 333443445678899988777777655432 3555555443 2222
Q ss_pred EEeCC-e-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCC-eEEEeeCCCCCceeEEEecC-CCeEEE
Q psy17325 309 LVSGQ-L-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSN-RSTIISTKIYWPNGLTLDIA-TRRVYF 384 (461)
Q Consensus 309 l~~~~-~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~-~~~l~~~~l~~p~glaiD~~-~~~ly~ 384 (461)
.+... . ...+++.|..+.++++-.. .+.|...++.... ...+..........+++.+. ++.+++
T Consensus 135 ~~~~~~~~v~~~~~~p~~~~~l~~~~~------------dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 202 (814)
T 3mkq_A 135 TFEGHEHFVMCVAFNPKDPSTFASGCL------------DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMI 202 (814)
T ss_dssp EEECCSSCEEEEEEETTEEEEEEEEET------------TSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEE
T ss_pred EEcCCCCcEEEEEEEcCCCCEEEEEeC------------CCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEE
Confidence 23222 2 7788888844544444333 3455555554333 33333233355677888651 344444
Q ss_pred EcCCCCeEEEEEecCCCCe
Q psy17325 385 ADSKLDFIDFCNYDGTGRQ 403 (461)
Q Consensus 385 ~d~~~~~I~~~~~~g~g~~ 403 (461)
+-...+.|...++. ++..
T Consensus 203 ~~~~dg~i~~~d~~-~~~~ 220 (814)
T 3mkq_A 203 TASDDLTIKIWDYQ-TKSC 220 (814)
T ss_dssp EECTTSEEEEEETT-TTEE
T ss_pred EEeCCCEEEEEECC-CCcE
Confidence 44556788888872 3443
No 221
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.49 E-value=0.069 Score=51.79 Aligned_cols=199 Identities=8% Similarity=-0.059 Sum_probs=116.2
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCC-------cEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEE
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT-------NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI 222 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~-------~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~ 222 (461)
.+..+++.+..++++++-..++.|.+.++... .....+.........|++.|... .++++- +....|...
T Consensus 83 ~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~--~~l~s~-~~dg~i~iw 159 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQ--NVLLSA-GCDNVILVW 159 (402)
T ss_dssp CEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBT--TEEEEE-ETTSCEEEE
T ss_pred CEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCC--CEEEEE-cCCCEEEEE
Confidence 45667777645667777777899999997654 22222233335688999999853 344443 244678777
Q ss_pred ecCCCCcEEEE--ecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEe
Q psy17325 223 GMDGSNRSTII--STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKAN 300 (461)
Q Consensus 223 ~~dG~~~~~i~--~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~ 300 (461)
++........+ .........+++.+.+..|+.+.... .|...+
T Consensus 160 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----------------------------------~i~iwd 204 (402)
T 2aq5_A 160 DVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDK-----------------------------------RVRVIE 204 (402)
T ss_dssp ETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTS-----------------------------------EEEEEE
T ss_pred ECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCC-----------------------------------cEEEEe
Confidence 77654333233 22334567889988666666554332 355555
Q ss_pred CCCCceEEEE-eCC--e-eeeEEEeccCCeEEEee--cCceeeEEEeecCCCCceEEEeecCCCe--EEEeeCCCCCcee
Q psy17325 301 MDGSNASILV-SGQ--L-YEALALDLENGMLYYST--LKCTRWLFWTDWGENPRIERIGMDGSNR--STIISTKIYWPNG 372 (461)
Q Consensus 301 ~~g~~~~~l~-~~~--~-p~~iavd~~~~~lY~t~--~~~~~~l~~~d~~~~~~I~~~~~dG~~~--~~l~~~~l~~p~g 372 (461)
+........+ ... . +..+++.|.+..|+... .. .+.|...++..... .......-.....
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~------------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 272 (402)
T 2aq5_A 205 PRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMS------------ERQVALWDTKHLEEPLSLQELDTSSGVLL 272 (402)
T ss_dssp TTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTC------------CEEEEEEETTBCSSCSEEEECCCCSSCEE
T ss_pred CCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCC------------CceEEEEcCccccCCceEEeccCCCceeE
Confidence 5433322222 211 1 57788887544333321 22 34455555433221 1222134456788
Q ss_pred EEEecCCCeEEEEcCCCCeEEEEEec
Q psy17325 373 LTLDIATRRVYFADSKLDFIDFCNYD 398 (461)
Q Consensus 373 laiD~~~~~ly~~d~~~~~I~~~~~~ 398 (461)
+++++.+..||++-...+.|...++.
T Consensus 273 ~~~s~~~~~l~~~g~~dg~i~i~d~~ 298 (402)
T 2aq5_A 273 PFFDPDTNIVYLCGKGDSSIRYFEIT 298 (402)
T ss_dssp EEEETTTTEEEEEETTCSCEEEEEEC
T ss_pred EEEcCCCCEEEEEEcCCCeEEEEEec
Confidence 99998889999887777889999984
No 222
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.48 E-value=0.027 Score=54.21 Aligned_cols=197 Identities=11% Similarity=0.055 Sum_probs=118.5
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEec--CCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCC
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK--DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~--~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~ 227 (461)
.+..+++.+.+.+++++-..++.|.+.++.+......+. ..-....++++.|..+ +.|+.+. ....|...++.+.
T Consensus 75 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~l~s~~--~d~~i~iwd~~~~ 151 (383)
T 3ei3_B 75 RVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNT-NQLFVSS--IRGATTLRDFSGS 151 (383)
T ss_dssp CEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEE-EEEEEEE--TTTEEEEEETTSC
T ss_pred CEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCC-CEEEEEe--CCCEEEEEECCCC
Confidence 455677776553666666678899999988665554443 2334578899988533 1444443 4467888888874
Q ss_pred CcEEEEecc--cccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCc
Q psy17325 228 NRSTIISTK--IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305 (461)
Q Consensus 228 ~~~~i~~~~--~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~ 305 (461)
....+.... ......+++.+.+..|+.+.... .|...++++..
T Consensus 152 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----------------------------------~i~i~d~~~~~ 196 (383)
T 3ei3_B 152 VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTG-----------------------------------RLLLLGLDGHE 196 (383)
T ss_dssp EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTS-----------------------------------EEEEEETTSCE
T ss_pred ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCC-----------------------------------CEEEEECCCCE
Confidence 444333221 13467899988777666555432 46666666655
Q ss_pred eEEEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecC----CCeEEEeeCCCCCceeEEEec-CC
Q psy17325 306 ASILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG----SNRSTIISTKIYWPNGLTLDI-AT 379 (461)
Q Consensus 306 ~~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG----~~~~~l~~~~l~~p~glaiD~-~~ 379 (461)
...+..... ...+++.|.+..++++-.. .+.|...++.. ....... ..-.....|++++ .+
T Consensus 197 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~------------d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~ 263 (383)
T 3ei3_B 197 IFKEKLHKAKVTHAEFNPRCDWLMATSSV------------DATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDS 263 (383)
T ss_dssp EEEEECSSSCEEEEEECSSCTTEEEEEET------------TSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTS
T ss_pred EEEeccCCCcEEEEEECCCCCCEEEEEeC------------CCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCC
Confidence 554443223 8899999877745554443 34454444432 1111122 3445678899987 44
Q ss_pred CeEEEEcCCCCeEEEEEec
Q psy17325 380 RRVYFADSKLDFIDFCNYD 398 (461)
Q Consensus 380 ~~ly~~d~~~~~I~~~~~~ 398 (461)
..|+.+ ...+.|...++.
T Consensus 264 ~~l~~~-~~d~~i~iwd~~ 281 (383)
T 3ei3_B 264 TKLLTT-DQRNEIRVYSSY 281 (383)
T ss_dssp CEEEEE-ESSSEEEEEETT
T ss_pred CEEEEE-cCCCcEEEEECC
Confidence 455544 456788888883
No 223
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.48 E-value=0.018 Score=56.84 Aligned_cols=199 Identities=10% Similarity=0.012 Sum_probs=121.0
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcE-------EEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEE
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-------IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI 222 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~-------~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~ 222 (461)
.+.++++.+.+..++++-...+.|.+.++..... ..........+..+++.|..+ .+|.+. +....|...
T Consensus 183 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~--~~l~s~-~~dg~i~i~ 259 (430)
T 2xyi_A 183 EGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHE--SLFGSV-ADDQKLMIW 259 (430)
T ss_dssp CCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCT--TEEEEE-ETTSEEEEE
T ss_pred CeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCC--CEEEEE-eCCCeEEEE
Confidence 4566777766665777778889999999875211 112222334578899999666 677776 455688888
Q ss_pred ecCCCC---cEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEE
Q psy17325 223 GMDGSN---RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKA 299 (461)
Q Consensus 223 ~~dG~~---~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~ 299 (461)
++.... ....+...-..++.|++.+.+..++++-...+ .|...
T Consensus 260 d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg----------------------------------~v~vw 305 (430)
T 2xyi_A 260 DTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADK----------------------------------TVALW 305 (430)
T ss_dssp ETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS----------------------------------EEEEE
T ss_pred ECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCC----------------------------------eEEEE
Confidence 876431 22222333456788999987777776655543 34555
Q ss_pred eCCC--CceEEEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecC-------------CCeEEEe
Q psy17325 300 NMDG--SNASILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG-------------SNRSTII 363 (461)
Q Consensus 300 ~~~g--~~~~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG-------------~~~~~l~ 363 (461)
++.. .....+..... ...|++.|.+..++.+... .+.|...++.. .......
T Consensus 306 d~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 373 (430)
T 2xyi_A 306 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT------------DRRLHVWDLSKIGEEQSTEDAEDGPPELLFI 373 (430)
T ss_dssp ETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEET------------TSCCEEEEGGGTTCCCCHHHHHHCCTTEEEE
T ss_pred eCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeC------------CCcEEEEeCCCCccccCccccccCCcceEEE
Confidence 5443 22233322222 7889999988777777655 34444444332 1122222
Q ss_pred -eCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEe
Q psy17325 364 -STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397 (461)
Q Consensus 364 -~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~ 397 (461)
...-..+..+++.+.+..++++-...+.|...++
T Consensus 374 ~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~ 408 (430)
T 2xyi_A 374 HGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQM 408 (430)
T ss_dssp CCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred cCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEc
Confidence 1334568999998766657777666777777777
No 224
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.47 E-value=0.14 Score=54.52 Aligned_cols=195 Identities=8% Similarity=0.010 Sum_probs=108.1
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCC-C
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS-N 228 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~-~ 228 (461)
.+..+++.+.+..|..... .+.|.+.+.........+.........+++.|... +|..+. ....|...+++.. .
T Consensus 57 ~v~~~~~s~~~~~l~~~~~-dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~~--~dg~i~vw~~~~~~~ 131 (814)
T 3mkq_A 57 PVRAGKFIARKNWIIVGSD-DFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKP--YVLSGS--DDLTVKLWNWENNWA 131 (814)
T ss_dssp CEEEEEEEGGGTEEEEEET-TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSS--EEEEEE--TTSEEEEEEGGGTSE
T ss_pred cEEEEEEeCCCCEEEEEeC-CCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCC--EEEEEc--CCCEEEEEECCCCce
Confidence 4567788876666665544 78999999765544444444445688999999866 777655 3457777777754 2
Q ss_pred cEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCc-eE
Q psy17325 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN-AS 307 (461)
Q Consensus 229 ~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~-~~ 307 (461)
....+...-.....+++.+..+.++++-...+ .|...++.... ..
T Consensus 132 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg----------------------------------~v~vwd~~~~~~~~ 177 (814)
T 3mkq_A 132 LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR----------------------------------TVKVWSLGQSTPNF 177 (814)
T ss_dssp EEEEEECCSSCEEEEEEETTEEEEEEEEETTS----------------------------------EEEEEETTCSSCSE
T ss_pred EEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCC----------------------------------eEEEEECCCCccee
Confidence 22333333445678888873443433333222 35555554333 22
Q ss_pred EEEeCC-e-eeeEEEec--cCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEE
Q psy17325 308 ILVSGQ-L-YEALALDL--ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 383 (461)
Q Consensus 308 ~l~~~~-~-p~~iavd~--~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly 383 (461)
.+.... . ...+++.| .+..|+.... .+.|...++........+.........+++.+.+..|+
T Consensus 178 ~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-------------dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 244 (814)
T 3mkq_A 178 TLTTGQERGVNYVDYYPLPDKPYMITASD-------------DLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIII 244 (814)
T ss_dssp EEECCCTTCCCEEEECCSTTCCEEEEECT-------------TSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEE
T ss_pred EEecCCCCCEEEEEEEECCCCCEEEEEeC-------------CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEE
Confidence 332222 2 66777777 4444444332 34454444433322222223445566778875544444
Q ss_pred EEcCCCCeEEEEEe
Q psy17325 384 FADSKLDFIDFCNY 397 (461)
Q Consensus 384 ~~d~~~~~I~~~~~ 397 (461)
.. ...+.|...++
T Consensus 245 ~~-~~dg~v~vwd~ 257 (814)
T 3mkq_A 245 SG-SEDGTLKIWNS 257 (814)
T ss_dssp EE-ETTSCEEEEET
T ss_pred EE-eCCCeEEEEEC
Confidence 44 34466777776
No 225
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.45 E-value=0.047 Score=55.90 Aligned_cols=205 Identities=12% Similarity=0.001 Sum_probs=111.6
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCC----cEEEEecCCCCC-ceeEEEcC--CCCceEEEEeecCCCCcEEEE
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGT----NRIVLAKDNITQ-PRGMMLDP--SPGTRWLFWTDWGENPRIERI 222 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~----~~~~l~~~~~~~-p~~ia~d~--~~g~~~ly~td~~~~~~I~~~ 222 (461)
.+..+++++.++.|.... .+.|.+.+++.. .....+...-.. ...+++.| ... +|+.+. ....|...
T Consensus 20 ~v~~~~~spdg~~l~~~~--~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~--~l~s~~--~dg~v~vw 93 (615)
T 1pgu_A 20 FTTHLSYDPTTNAIAYPC--GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQ--YLCSGD--ESGKVIVW 93 (615)
T ss_dssp CCCCCEEETTTTEEEEEE--TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCC--EEEEEE--TTSEEEEE
T ss_pred ceeEEEECCCCCEEEEec--CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCC--EEEEec--CCCEEEEE
Confidence 456788888777777766 578999987744 333333333345 78999999 755 666655 34566666
Q ss_pred ecC-C------C-CcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcce
Q psy17325 223 GMD-G------S-NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294 (461)
Q Consensus 223 ~~d-G------~-~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~ 294 (461)
++. | . .....+...-.....+++.+.++.|+.+....+.. .
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~-------------------------------~ 142 (615)
T 1pgu_A 94 GWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNF-------------------------------G 142 (615)
T ss_dssp EEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCS-------------------------------E
T ss_pred eCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCc-------------------------------c
Confidence 663 2 1 11112222334577899998887777765443110 1
Q ss_pred eeeEEeCCCCceEEEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCC---Cc
Q psy17325 295 KIGKANMDGSNASILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY---WP 370 (461)
Q Consensus 295 ~I~~~~~~g~~~~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~---~p 370 (461)
.|...+ .+.....+..... ...+++.|.+..++++-.. .+.|...++........+...-. ..
T Consensus 143 ~v~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~------------d~~v~vwd~~~~~~~~~~~~~~~~~~~v 209 (615)
T 1pgu_A 143 VFISWD-SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGD------------DGSVVFYQGPPFKFSASDRTHHKQGSFV 209 (615)
T ss_dssp EEEETT-TCCEEEECCSCSSCEEEEEECSSSSCEEEEEET------------TTEEEEEETTTBEEEEEECSSSCTTCCE
T ss_pred EEEEEE-CCCcceeeecCCccEEEEEECCCCCcEEEEEeC------------CCcEEEEeCCCcceeeeecccCCCCceE
Confidence 233322 1221222211111 7788888877645544433 33444433332222222212233 56
Q ss_pred eeEEEecC-CCeEEEEcCCCCeEEEEEecCCCCeEEE
Q psy17325 371 NGLTLDIA-TRRVYFADSKLDFIDFCNYDGTGRQQVI 406 (461)
Q Consensus 371 ~glaiD~~-~~~ly~~d~~~~~I~~~~~~g~g~~~~~ 406 (461)
..+++.+. +..|+.+ ...+.|...++. ++.....
T Consensus 210 ~~~~~~~~~~~~l~~~-~~dg~i~vwd~~-~~~~~~~ 244 (615)
T 1pgu_A 210 RDVEFSPDSGEFVITV-GSDRKISCFDGK-SGEFLKY 244 (615)
T ss_dssp EEEEECSTTCCEEEEE-ETTCCEEEEETT-TCCEEEE
T ss_pred EEEEECCCCCCEEEEE-eCCCeEEEEECC-CCCEeEE
Confidence 78899876 4445544 446788888873 4554333
No 226
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.44 E-value=0.088 Score=50.25 Aligned_cols=197 Identities=12% Similarity=-0.006 Sum_probs=110.8
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCc
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~ 229 (461)
.+..+++.+. ++...+-..++.|.+.++........+...-.....+++.+... .++.+- +....|...++.....
T Consensus 129 ~V~~v~~spd-g~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~--~~l~s~-s~D~~v~iwd~~~~~~ 204 (344)
T 4gqb_B 129 IVSTVSVLSS-GTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKD--SVFLSC-SEDNRILLWDTRCPKP 204 (344)
T ss_dssp CEEEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCT--TEEEEE-ETTSCEEEEETTSSSC
T ss_pred CEEEEEECCC-CCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCC--Cceeee-ccccccccccccccce
Confidence 4567788764 44555666678999999876554444444445678899988765 677665 3446777777653332
Q ss_pred -EEEEe-cccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCC-Cce
Q psy17325 230 -STIIS-TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG-SNA 306 (461)
Q Consensus 230 -~~i~~-~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g-~~~ 306 (461)
..+.. ..-..+..+++.+.+++++.+-...+ .|...++.. +..
T Consensus 205 ~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg----------------------------------~v~~wd~~~~~~~ 250 (344)
T 4gqb_B 205 ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG----------------------------------TVSLVDTKSTSCV 250 (344)
T ss_dssp EEECC----CCCEEEEEECSSCTTEEEEEETTS----------------------------------EEEEEESCC--CC
T ss_pred eeeeecceeeccceeeeecCCCCcceEEeccCC----------------------------------cEEEEECCCCcEE
Confidence 22221 12234677888877777766544432 344444432 222
Q ss_pred EEEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEE
Q psy17325 307 SILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385 (461)
Q Consensus 307 ~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~ 385 (461)
..+..... ...|++.|.+..+..+-+. .+.|...++.......+. ..-....+|++.+.+++|..+
T Consensus 251 ~~~~~h~~~v~~v~fsp~g~~~lasgs~------------D~~i~vwd~~~~~~~~~~-~H~~~V~~v~~sp~~~~llas 317 (344)
T 4gqb_B 251 LSSAVHSQCVTGLVFSPHSVPFLASLSE------------DCSLAVLDSSLSELFRSQ-AHRDFVRDATWSPLNHSLLTT 317 (344)
T ss_dssp EEEECCSSCEEEEEECSSSSCCEEEEET------------TSCEEEECTTCCEEEEEC-CCSSCEEEEEECSSSTTEEEE
T ss_pred EEEcCCCCCEEEEEEccCCCeEEEEEeC------------CCeEEEEECCCCcEEEEc-CCCCCEEEEEEeCCCCeEEEE
Confidence 33322122 7888898877655554433 334444444333222221 333456788888777777665
Q ss_pred cCCCCeEEEEEe
Q psy17325 386 DSKLDFIDFCNY 397 (461)
Q Consensus 386 d~~~~~I~~~~~ 397 (461)
-...++|..-++
T Consensus 318 ~s~D~~v~~w~v 329 (344)
T 4gqb_B 318 VGWDHQVVHHVV 329 (344)
T ss_dssp EETTSCEEEEEC
T ss_pred EcCCCeEEEEEC
Confidence 444455655555
No 227
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.43 E-value=0.0091 Score=63.06 Aligned_cols=98 Identities=11% Similarity=0.089 Sum_probs=53.3
Q ss_pred eeeeEEeCCCCceEEEEeCC---e----eeeEEEeccCCeEEEe-ecCceeeEEEeecCCCCceEEEe-ecCCC---eEE
Q psy17325 294 LKIGKANMDGSNASILVSGQ---L----YEALALDLENGMLYYS-TLKCTRWLFWTDWGENPRIERIG-MDGSN---RST 361 (461)
Q Consensus 294 ~~I~~~~~~g~~~~~l~~~~---~----p~~iavd~~~~~lY~t-~~~~~~~l~~~d~~~~~~I~~~~-~dG~~---~~~ 361 (461)
..|...++++.....+.... . +..+++.|.+..|+++ ... .+ +.....+|+..+ .++.. .+.
T Consensus 280 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~-~~-----~~~~~~~l~~~d~~~~~~~~~~~~ 353 (723)
T 1xfd_A 280 SILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIP-QG-----GRGKFYHITVSSSQPNSSNDNIQS 353 (723)
T ss_dssp EEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEEC-CS-----SSSCEEEEEEECSSCCSSSCCCCB
T ss_pred EEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecc-cC-----CCcceeEEEEEeccCCCCccceeE
Confidence 35777777665544443221 1 1478888888777764 222 00 000022577776 45554 333
Q ss_pred EeeCCCCCceeEEEecCCCeEEEEcC----CCCeEEEEEe
Q psy17325 362 IISTKIYWPNGLTLDIATRRVYFADS----KLDFIDFCNY 397 (461)
Q Consensus 362 l~~~~l~~p~glaiD~~~~~ly~~d~----~~~~I~~~~~ 397 (461)
+..........++++++++.||++-. ..-.|+++++
T Consensus 354 l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 354 ITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp SCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECS
T ss_pred eecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeC
Confidence 33112221223689989999988643 3456888887
No 228
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=97.43 E-value=7.6e-05 Score=64.35 Aligned_cols=45 Identities=36% Similarity=0.896 Sum_probs=39.2
Q ss_pred ceecCcceecCC-c---ccCceeeccCCccccCCCCeeeeCCCCceeec
Q psy17325 67 TCQDMNECEQPG-Y---CSQMCTNTKGSYICSCNEGYVLEYDNHTCKAI 111 (461)
Q Consensus 67 ~C~d~~eC~~~~-~---C~~~C~~~~g~~~C~C~~g~~l~~~~~~C~~~ 111 (461)
.|.+++||.... . |++.|.|+.++|.|.|++||.|..++++|.++
T Consensus 120 ~~~di~eC~~~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~~~ 168 (170)
T 1szb_A 120 AAEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSEQ 168 (170)
T ss_dssp EEEECCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEECTTSSCEEEC
T ss_pred eccccCcccCCCCCCCccCCccccCCCCEEEeCCCCcEECCCCCccccc
Confidence 577899998443 3 99999999999999999999999999999764
No 229
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=97.42 E-value=8.3e-05 Score=56.29 Aligned_cols=46 Identities=30% Similarity=0.886 Sum_probs=38.9
Q ss_pred cCcceecC-Ccc-cCceeeccCCccccCCCCeeeeCCCCceeeccccc
Q psy17325 70 DMNECEQP-GYC-SQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA 115 (461)
Q Consensus 70 d~~eC~~~-~~C-~~~C~~~~g~~~C~C~~g~~l~~~~~~C~~~~~~~ 115 (461)
+++||... ..| .+.|.++.++|.|.|++||.+..+++.|.+++++.
T Consensus 2 dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~ 49 (87)
T 1z6c_A 2 DVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECS 49 (87)
T ss_dssp CSCSSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHH
T ss_pred ccccccCCCCCCCCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeC
Confidence 67889743 348 45899999999999999999988889999888875
No 230
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.39 E-value=0.00025 Score=67.61 Aligned_cols=58 Identities=28% Similarity=0.701 Sum_probs=47.8
Q ss_pred CCCCCCCCCCCC--CCCcccCC-CCCCCCCceeCCCCceEeCCCCCeecCCCCceecCccee
Q psy17325 17 DCPNGADEGPGC--DLAECKHK-FGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECE 75 (461)
Q Consensus 17 dC~dg~de~~~C--~~~~C~~~-~~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~d~~eC~ 75 (461)
.|+.|+. +..| +++||... +..|.+.|.+..++|.|.|++||.+..++..|.+.++|.
T Consensus 29 ~C~~g~~-g~~C~~~~~eC~~~~~~~C~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~c~ 89 (317)
T 3h5c_B 29 TCSPGYE-GSNCELAKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCA 89 (317)
T ss_dssp CCSSSCC-SSSSCCCSSSCCTTCTTSCSSEEECCSSSCEEECCTTEECCTTSSCCEECSSCC
T ss_pred ECCCCCc-CCccccCcccCCCCCCCCCcCccccCCCeeEEeccccccccccccccccccccc
Confidence 4666664 4678 58899863 368999999999999999999999888889999988873
No 231
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.38 E-value=0.026 Score=53.46 Aligned_cols=96 Identities=10% Similarity=0.104 Sum_probs=61.9
Q ss_pred ceeeeeeeecCCeEEEEeC--------CCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecC---CCCc
Q psy17325 150 LVEGLAYDWIGGHIYWLDS--------RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG---ENPR 218 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~--------~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~---~~~~ 218 (461)
.+..+++ .++.|+++-. ....|.+.++++.....+ .....+++.|... +|+++... ....
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-----~~~~~~~~SpDg~--~la~~~~~~~~~~~~ 86 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI-----ENATMPRISPDGK--KIAFMRANEEKKVSE 86 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE-----ESCEEEEECTTSS--EEEEEEEETTTTEEE
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc-----ccCCCeEECCCCC--EEEEEEeccCCCcce
Confidence 3444555 3566655421 145688888887665555 3467789999866 77766532 2356
Q ss_pred EEEEecCCCCcEEEEecccccceeEEeeccCCeeEEec
Q psy17325 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 256 (461)
Q Consensus 219 I~~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d 256 (461)
|+.+++++.....+..... ...+++.+.++.|+++.
T Consensus 87 l~~~~~~~g~~~~l~~~~~--~~~~~wspdg~~l~~~~ 122 (347)
T 2gop_A 87 IWVADLETLSSKKILEAKN--IRSLEWNEDSRKLLIVG 122 (347)
T ss_dssp EEEEETTTTEEEEEEEESE--EEEEEECTTSSEEEEEE
T ss_pred EEEEECCCCceEEEEcCCC--ccceeECCCCCEEEEEE
Confidence 9999988765555544322 67888888888888874
No 232
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.37 E-value=0.017 Score=64.15 Aligned_cols=221 Identities=10% Similarity=0.012 Sum_probs=127.7
Q ss_pred eeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCC----------CCCceeEEEc-CCCCceEEEEeecCCCCcEEE
Q psy17325 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDN----------ITQPRGMMLD-PSPGTRWLFWTDWGENPRIER 221 (461)
Q Consensus 153 ~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~----------~~~p~~ia~d-~~~g~~~ly~td~~~~~~I~~ 221 (461)
.+++.+.++.|.++. .+.|.+.++.+.....+.... ...+..+++. |... +|.++. ...|+.
T Consensus 249 ~~~~SpDG~~la~~~--~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~--~la~~~---~~~i~~ 321 (1045)
T 1k32_A 249 PRHLNTDGRRILFSK--GGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGD--LIAFVS---RGQAFI 321 (1045)
T ss_dssp EEEEEESSSCEEEEE--TTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGG--CEEEEE---TTEEEE
T ss_pred eeeEcCCCCEEEEEe--CCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCC--EEEEEE---cCEEEE
Confidence 446666666666653 567888887554443222110 0136788898 8744 666554 347777
Q ss_pred EecCCCCcEEEEecccc-cceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeee-EE
Q psy17325 222 IGMDGSNRSTIISTKIY-WPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG-KA 299 (461)
Q Consensus 222 ~~~dG~~~~~i~~~~~~-~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~-~~ 299 (461)
.++++.....+. .... .+..+++. .++.|+++.. . ..|. ..
T Consensus 322 ~~~~~~~~~~~~-~~~~~~~~~~~~s-dg~~l~~~s~-~----------------------------------~~l~~~~ 364 (1045)
T 1k32_A 322 QDVSGTYVLKVP-EPLRIRYVRRGGD-TKVAFIHGTR-E----------------------------------GDFLGIY 364 (1045)
T ss_dssp ECTTSSBEEECS-CCSCEEEEEECSS-SEEEEEEEET-T----------------------------------EEEEEEE
T ss_pred EcCCCCceEEcc-CCCcceEEeeeEc-CCCeEEEEEC-C----------------------------------CceEEEE
Confidence 777754433221 1112 34455665 5555665443 1 2466 66
Q ss_pred eCCCCceEEEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecC
Q psy17325 300 NMDGSNASILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 378 (461)
Q Consensus 300 ~~~g~~~~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~ 378 (461)
++++...+.+..... +..+++.|.+..|+++.. .+.|+..++++.....+.........++++.++
T Consensus 365 d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~-------------~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpD 431 (1045)
T 1k32_A 365 DYRTGKAEKFEENLGNVFAMGVDRNGKFAVVAND-------------RFEIMTVDLETGKPTVIERSREAMITDFTISDN 431 (1045)
T ss_dssp ETTTCCEEECCCCCCSEEEEEECTTSSEEEEEET-------------TSEEEEEETTTCCEEEEEECSSSCCCCEEECTT
T ss_pred ECCCCCceEecCCccceeeeEECCCCCEEEEECC-------------CCeEEEEECCCCceEEeccCCCCCccceEECCC
Confidence 666665554442222 788999998888776543 346777777665555555344445588999988
Q ss_pred CCeEEEEcCC---------CCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeCC
Q psy17325 379 TRRVYFADSK---------LDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEG 442 (461)
Q Consensus 379 ~~~ly~~d~~---------~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~~ 442 (461)
+.+|.++... ...|...++ .+.....+....... ...+++.++.+|||+...
T Consensus 432 G~~la~~~~~~~~~~~~~~~~~i~l~d~--~~g~~~~l~~~~~~~----------~~~~~spdG~~l~~~s~~ 492 (1045)
T 1k32_A 432 SRFIAYGFPLKHGETDGYVMQAIHVYDM--EGRKIFAATTENSHD----------YAPAFDADSKNLYYLSYR 492 (1045)
T ss_dssp SCEEEEEEEECSSTTCSCCEEEEEEEET--TTTEEEECSCSSSBE----------EEEEECTTSCEEEEEESC
T ss_pred CCeEEEEecCccccccCCCCCeEEEEEC--CCCcEEEeeCCCccc----------CCceEcCCCCEEEEEecc
Confidence 8888887442 257888888 343323222211111 134555667788887653
No 233
>2gtl_O Extracellular hemoglobin linker L3 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=97.37 E-value=1.5e-05 Score=70.04 Aligned_cols=36 Identities=36% Similarity=0.678 Sum_probs=29.3
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCC
Q psy17325 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFG 38 (461)
Q Consensus 2 ~~~Ci~~~~~Cd~~~dC~dg~de~~~C~~~~C~~~~~ 38 (461)
+++|||.+|+|||..||.||+|| ..|....|.+..+
T Consensus 66 ~g~CIp~~~~CDG~~DC~DgSDE-~~C~~~~C~~~~F 101 (215)
T 2gtl_O 66 DPQCISKLFVCDGHNDCRNGEDE-KDCTLPTKAGDKF 101 (215)
T ss_dssp SCCEEEGGGTTSSSCCSSSCHHH-HCCCCSSCTTCEE
T ss_pred CCcCccccccCCCCCcCCCcccc-cCCCCCCcCCCce
Confidence 57999999999999999999999 5676555554443
No 234
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.36 E-value=0.1 Score=49.12 Aligned_cols=198 Identities=10% Similarity=0.082 Sum_probs=114.6
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcE
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS 230 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~ 230 (461)
...+++.+ .+.+..+-..++.|.+.++........+.........+++.|... +|.... ....|...++......
T Consensus 83 v~~~~~~~-~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~--~l~~g~--~dg~v~i~~~~~~~~~ 157 (321)
T 3ow8_A 83 VVSVDISH-TLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQ--YLATGT--HVGKVNIFGVESGKKE 157 (321)
T ss_dssp EEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSS--EEEEEC--TTSEEEEEETTTCSEE
T ss_pred EEEEEECC-CCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCC--EEEEEc--CCCcEEEEEcCCCcee
Confidence 34455543 344566667788999999875554444444435577899999865 655443 4467777777655444
Q ss_pred EEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEE
Q psy17325 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310 (461)
Q Consensus 231 ~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~ 310 (461)
..+...-.....+++.+.++.|..+.... .|...++........+
T Consensus 158 ~~~~~~~~~v~~~~~spdg~~lasg~~dg-----------------------------------~i~iwd~~~~~~~~~~ 202 (321)
T 3ow8_A 158 YSLDTRGKFILSIAYSPDGKYLASGAIDG-----------------------------------IINIFDIATGKLLHTL 202 (321)
T ss_dssp EEEECSSSCEEEEEECTTSSEEEEEETTS-----------------------------------CEEEEETTTTEEEEEE
T ss_pred EEecCCCceEEEEEECCCCCEEEEEcCCC-----------------------------------eEEEEECCCCcEEEEE
Confidence 33443344567888988766666554332 3445554433222222
Q ss_pred eCC-e-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCC
Q psy17325 311 SGQ-L-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 388 (461)
Q Consensus 311 ~~~-~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~ 388 (461)
... . ...+++.|.+..|..+. . .+.|...++........+...-.....|++.+.+..|+-+ ..
T Consensus 203 ~~h~~~v~~l~~spd~~~l~s~s-~------------dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~-s~ 268 (321)
T 3ow8_A 203 EGHAMPIRSLTFSPDSQLLVTAS-D------------DGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSS-SS 268 (321)
T ss_dssp CCCSSCCCEEEECTTSCEEEEEC-T------------TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE-ET
T ss_pred cccCCceeEEEEcCCCCEEEEEc-C------------CCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEE-eC
Confidence 222 2 78899998766554432 2 3445555554433333332445567889998665555544 45
Q ss_pred CCeEEEEEecCCCCe
Q psy17325 389 LDFIDFCNYDGTGRQ 403 (461)
Q Consensus 389 ~~~I~~~~~~g~g~~ 403 (461)
.+.|...++. ++..
T Consensus 269 D~~v~iwd~~-~~~~ 282 (321)
T 3ow8_A 269 DKSVKVWDVG-TRTC 282 (321)
T ss_dssp TSCEEEEETT-TTEE
T ss_pred CCcEEEEeCC-CCEE
Confidence 6788888882 4444
No 235
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=97.35 E-value=7e-05 Score=65.65 Aligned_cols=55 Identities=25% Similarity=0.692 Sum_probs=38.2
Q ss_pred CCCCCCCCCCCCC--C-CcccCCCCCCCCCceeCCCCceEeCCCCCeecCCCCceecCc
Q psy17325 17 DCPNGADEGPGCD--L-AECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMN 72 (461)
Q Consensus 17 dC~dg~de~~~C~--~-~~C~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~d~~ 72 (461)
.|+.|+. +..|. + ++|...+..|.+.|.+.+++|.|.|++||.+..++..|+++.
T Consensus 66 ~C~~Gf~-G~~Ce~~i~deC~~~~~~C~~~C~n~~gsy~C~C~~Gy~l~~dG~~C~~~~ 123 (195)
T 1nfu_B 66 TCLEGFE-GKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTG 123 (195)
T ss_dssp ----------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEESS
T ss_pred eCCCCce-eccccccccccccCCCCCCCCEeECCCCCeEEECCCCceeCCCCCccccCC
Confidence 4666653 46784 4 789887788999999999999999999999988899998774
No 236
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.34 E-value=0.13 Score=49.85 Aligned_cols=198 Identities=10% Similarity=-0.008 Sum_probs=113.3
Q ss_pred eeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecC-CCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEE
Q psy17325 154 LAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD-NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI 232 (461)
Q Consensus 154 iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~-~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i 232 (461)
.+++|..+++.. -...+.|.+.+.+......+... .-.....+++.|... +|+.+. ....|...++........
T Consensus 97 ~~~~~s~~~l~~-~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~--~l~~~~--~dg~i~iwd~~~~~~~~~ 171 (401)
T 4aez_A 97 NLLDWSNLNVVA-VALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGS--FLSVGL--GNGLVDIYDVESQTKLRT 171 (401)
T ss_dssp BCEEECTTSEEE-EEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSS--EEEEEE--TTSCEEEEETTTCCEEEE
T ss_pred EEEeecCCCEEE-EECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCC--EEEEEC--CCCeEEEEECcCCeEEEE
Confidence 346665555544 34567888888765554444433 334578999999755 666665 345777777765443333
Q ss_pred EecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCC-Cc-eEEEE
Q psy17325 233 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG-SN-ASILV 310 (461)
Q Consensus 233 ~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g-~~-~~~l~ 310 (461)
+.........++++ ...|+.+... +.|...++.. .. ...+.
T Consensus 172 ~~~~~~~v~~~~~~--~~~l~~~~~d-----------------------------------g~i~i~d~~~~~~~~~~~~ 214 (401)
T 4aez_A 172 MAGHQARVGCLSWN--RHVLSSGSRS-----------------------------------GAIHHHDVRIANHQIGTLQ 214 (401)
T ss_dssp ECCCSSCEEEEEEE--TTEEEEEETT-----------------------------------SEEEEEETTSSSCEEEEEE
T ss_pred ecCCCCceEEEEEC--CCEEEEEcCC-----------------------------------CCEEEEecccCcceeeEEc
Confidence 33333345556554 3444433332 2355555552 22 22222
Q ss_pred eCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcC--
Q psy17325 311 SGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADS-- 387 (461)
Q Consensus 311 ~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~-- 387 (461)
.... ..++++.|.+..|+.+.. .+.|...++............-.....|++.+.+..|+.+-.
T Consensus 215 ~~~~~v~~~~~~~~~~~l~s~~~-------------d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs 281 (401)
T 4aez_A 215 GHSSEVCGLAWRSDGLQLASGGN-------------DNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGT 281 (401)
T ss_dssp CCSSCEEEEEECTTSSEEEEEET-------------TSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCT
T ss_pred CCCCCeeEEEEcCCCCEEEEEeC-------------CCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCC
Confidence 2222 788999986555554332 345555555543333333245556789999887888888754
Q ss_pred CCCeEEEEEecCCCCeEEEE
Q psy17325 388 KLDFIDFCNYDGTGRQQVIL 407 (461)
Q Consensus 388 ~~~~I~~~~~~g~g~~~~~~ 407 (461)
..+.|...++. ++.....+
T Consensus 282 ~d~~i~i~d~~-~~~~~~~~ 300 (401)
T 4aez_A 282 MDKQIHFWNAA-TGARVNTV 300 (401)
T ss_dssp TTCEEEEEETT-TCCEEEEE
T ss_pred CCCEEEEEECC-CCCEEEEE
Confidence 57889999984 45544433
No 237
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.33 E-value=8.1e-05 Score=61.41 Aligned_cols=56 Identities=25% Similarity=0.676 Sum_probs=38.3
Q ss_pred CCCCCCCCCCCCC--C-CcccCCCCCCCCCceeCCCCceEeCCCCCeecCCCCceecCcc
Q psy17325 17 DCPNGADEGPGCD--L-AECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNE 73 (461)
Q Consensus 17 dC~dg~de~~~C~--~-~~C~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~d~~e 73 (461)
.|+.|+. +..|. + ++|...+..|.+.|.+.+++|.|.|++||.+..++..|+++++
T Consensus 66 ~C~~G~~-G~~C~~~i~d~C~~~~~~C~~~C~~~~g~y~C~C~~Gy~l~~~g~~C~~~~~ 124 (134)
T 2vh0_B 66 TCLEGFE-GKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGP 124 (134)
T ss_dssp ----------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEESSS
T ss_pred eCCCCcc-CCccccCCCCccccCCCCCCCEeECCCCCEEEECCCCcEECCCCCccCcCCC
Confidence 3555553 35674 4 7898777789999999999999999999999888999988754
No 238
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=97.33 E-value=0.00011 Score=69.05 Aligned_cols=46 Identities=26% Similarity=0.618 Sum_probs=41.3
Q ss_pred CCcccCC-CCCCCCCceeCCCCceEeCCCCCeecCCCCceecCccee
Q psy17325 30 LAECKHK-FGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECE 75 (461)
Q Consensus 30 ~~~C~~~-~~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~d~~eC~ 75 (461)
.+||..+ ++.|.+.|.++.++|.|.|.+||.+..++.+|.+.++|.
T Consensus 2 ~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~ 48 (283)
T 3f1s_B 2 KNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCA 48 (283)
T ss_dssp -CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECTTSSCEEECSTTC
T ss_pred CCccCCCCCCCCCCEeeCCCCCeEecCCCCcccCCCCCccccccccc
Confidence 5789877 899999999999999999999999999999999888873
No 239
>2gtl_N Extracellular hemoglobin linker L2 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=97.32 E-value=6.3e-05 Score=65.55 Aligned_cols=28 Identities=43% Similarity=0.898 Sum_probs=24.4
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCC-CCCC
Q psy17325 2 ADRCVNLTKVCDGKTDCPNGADEG-PGCD 29 (461)
Q Consensus 2 ~~~Ci~~~~~Cd~~~dC~dg~de~-~~C~ 29 (461)
+++||+..|+|||..||+||+||. ..|.
T Consensus 64 ~g~CIp~~wvCDG~~DC~DGSDE~~~~C~ 92 (220)
T 2gtl_N 64 EQECISDLLVCDGHKDCHNAHDEDPDVCD 92 (220)
T ss_dssp SCCEEETTTTTSSSCCSTTCTTSCGGGGC
T ss_pred CCcEeCcceecCCCCCCCCCCccCcccCC
Confidence 478999999999999999999995 3564
No 240
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=97.31 E-value=0.00014 Score=68.27 Aligned_cols=46 Identities=35% Similarity=0.769 Sum_probs=39.1
Q ss_pred cCcceec--CCcccCceeeccCCccccCCCCeeeeCCCCceeeccccc
Q psy17325 70 DMNECEQ--PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA 115 (461)
Q Consensus 70 d~~eC~~--~~~C~~~C~~~~g~~~C~C~~g~~l~~~~~~C~~~~~~~ 115 (461)
++|||.. +++|+|.|.++.++|.|+|+.||.+..+.++|.+.+++.
T Consensus 1 ~~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~ 48 (283)
T 3f1s_B 1 AKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCA 48 (283)
T ss_dssp --CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECTTSSCEEECSTTC
T ss_pred CCCccCCCCCCCCCCEeeCCCCCeEecCCCCcccCCCCCccccccccc
Confidence 3688974 589999999999999999999999999999998876543
No 241
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.30 E-value=0.034 Score=53.83 Aligned_cols=203 Identities=9% Similarity=0.019 Sum_probs=116.7
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCc------EEEEe---cCCCCCceeEEEcCCCCceEEEEeecCCCCcEE
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN------RIVLA---KDNITQPRGMMLDPSPGTRWLFWTDWGENPRIE 220 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~------~~~l~---~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~ 220 (461)
.+..+++.+.+++++++-..++.|.+.++.... ..... .........+++.|..+ .++++- .....|.
T Consensus 115 ~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~l~~~-~~dg~v~ 191 (416)
T 2pm9_A 115 SVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLA--HVFASA-GSSNFAS 191 (416)
T ss_dssp CCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCT--TEEEEE-SSSSCEE
T ss_pred ceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCC--cEEEEE-cCCCCEE
Confidence 456677776656777777778999999987654 22111 12234578899999844 455554 3456788
Q ss_pred EEecCCCCcEEEEecc------cccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcce
Q psy17325 221 RIGMDGSNRSTIISTK------IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294 (461)
Q Consensus 221 ~~~~dG~~~~~i~~~~------~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~ 294 (461)
..++........+... ......+++.+.+..++++-...+. .+
T Consensus 192 iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~-------------------------------~~ 240 (416)
T 2pm9_A 192 IWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN-------------------------------DP 240 (416)
T ss_dssp EEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS-------------------------------SC
T ss_pred EEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC-------------------------------Cc
Confidence 8887754333223222 3457788998876555544333210 00
Q ss_pred eeeEEeCCCC-c-eEEEE-eCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCc
Q psy17325 295 KIGKANMDGS-N-ASILV-SGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 370 (461)
Q Consensus 295 ~I~~~~~~g~-~-~~~l~-~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p 370 (461)
.|...++... . ...+. .... +..+++.|..+.++++-.. .+.|...++........+...-...
T Consensus 241 ~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~------------dg~v~~wd~~~~~~~~~~~~~~~~v 308 (416)
T 2pm9_A 241 SILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGR------------DNTVLLWNPESAEQLSQFPARGNWC 308 (416)
T ss_dssp CCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEES------------SSEEEEECSSSCCEEEEEECSSSCC
T ss_pred eEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeC------------CCCEEEeeCCCCccceeecCCCCce
Confidence 2444444432 1 22222 1112 7888998845555544443 3455555544333322222444567
Q ss_pred eeEEEecCCCeEEEEcCCCCeEEEEEec
Q psy17325 371 NGLTLDIATRRVYFADSKLDFIDFCNYD 398 (461)
Q Consensus 371 ~glaiD~~~~~ly~~d~~~~~I~~~~~~ 398 (461)
..+++.+.+.+++++-...+.|...++.
T Consensus 309 ~~~~~s~~~~~~l~s~~~d~~i~iw~~~ 336 (416)
T 2pm9_A 309 FKTKFAPEAPDLFACASFDNKIEVQTLQ 336 (416)
T ss_dssp CCEEECTTCTTEEEECCSSSEEEEEESC
T ss_pred EEEEECCCCCCEEEEEecCCcEEEEEcc
Confidence 8899987665677776667888888883
No 242
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.30 E-value=0.14 Score=49.35 Aligned_cols=196 Identities=9% Similarity=-0.061 Sum_probs=107.8
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCc
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~ 229 (461)
.+..+++.+.+..|+ +-..++.|.+.+.+|.....+.. .......+++.|... +|+.+. ....|...++.....
T Consensus 110 ~v~~~~~s~~~~~l~-~~~~dg~i~i~~~~~~~~~~~~~-~~~~v~~~~~~~~~~--~l~~~~--~d~~i~iwd~~~~~~ 183 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIV-TGVENGELRLWNKTGALLNVLNF-HRAPIVSVKWNKDGT--HIISMD--VENVTILWNVISGTV 183 (425)
T ss_dssp CEEEEEECTTSSEEE-EEETTSCEEEEETTSCEEEEECC-CCSCEEEEEECTTSS--EEEEEE--TTCCEEEEETTTTEE
T ss_pred ceEEEEEcCCCCEEE-EEeCCCeEEEEeCCCCeeeeccC-CCccEEEEEECCCCC--EEEEEe--cCCeEEEEECCCCcE
Confidence 456677776444444 44556889999988876665543 335678999999866 777665 345777777754332
Q ss_pred EEEEeccccc---------------ceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcce
Q psy17325 230 STIISTKIYW---------------PNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294 (461)
Q Consensus 230 ~~i~~~~~~~---------------P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~ 294 (461)
...+...... ...+++.+ .+.++.+.. . +
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~----------------------------------g 227 (425)
T 1r5m_A 184 MQHFELKETGGSSINAENHSGDGSLGVDVEWVD-DDKFVIPGP-K----------------------------------G 227 (425)
T ss_dssp EEEECCC---------------CCCBSCCEEEE-TTEEEEECG-G----------------------------------G
T ss_pred EEEeeccccCccceeeccccCCcceeeEEEEcC-CCEEEEEcC-C----------------------------------C
Confidence 2222211111 44555554 233333322 2 2
Q ss_pred eeeEEeCCCCceEEEEeCC-e-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCcee
Q psy17325 295 KIGKANMDGSNASILVSGQ-L-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372 (461)
Q Consensus 295 ~I~~~~~~g~~~~~l~~~~-~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~g 372 (461)
.|...++........+... . ...+++.|.+..|+.+.. .+.|...++........+...-.....
T Consensus 228 ~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-------------d~~i~i~d~~~~~~~~~~~~~~~~i~~ 294 (425)
T 1r5m_A 228 AIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASD-------------DGTLRIWHGGNGNSQNCFYGHSQSIVS 294 (425)
T ss_dssp CEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEET-------------TSCEEEECSSSBSCSEEECCCSSCEEE
T ss_pred eEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcC-------------CCEEEEEECCCCccceEecCCCccEEE
Confidence 3555555443322222222 2 778899987765555432 345555554433322223234456778
Q ss_pred EEEecCCCeEEEEcCCCCeEEEEEecCCCCe
Q psy17325 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403 (461)
Q Consensus 373 laiD~~~~~ly~~d~~~~~I~~~~~~g~g~~ 403 (461)
+++.+.+ ++++-...+.|...++. ++..
T Consensus 295 ~~~~~~~--~l~~~~~d~~i~i~d~~-~~~~ 322 (425)
T 1r5m_A 295 ASWVGDD--KVISCSMDGSVRLWSLK-QNTL 322 (425)
T ss_dssp EEEETTT--EEEEEETTSEEEEEETT-TTEE
T ss_pred EEECCCC--EEEEEeCCCcEEEEECC-CCcE
Confidence 8887554 45555566788888883 4443
No 243
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.25 E-value=0.14 Score=48.47 Aligned_cols=201 Identities=9% Similarity=0.062 Sum_probs=110.9
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCCc--EEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCC
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN--RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~--~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~ 228 (461)
+..+++.+.+ ++.++-...+.|.+.++++.. ....+...-.....|++.|... +|+.+. ....|...++....
T Consensus 11 i~~~~~s~~~-~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--~l~~~~--~dg~i~vwd~~~~~ 85 (372)
T 1k8k_C 11 ISCHAWNKDR-TQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSN--RIVTCG--TDRNAYVWTLKGRT 85 (372)
T ss_dssp CCEEEECTTS-SEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTT--EEEEEE--TTSCEEEEEEETTE
T ss_pred eEEEEECCCC-CEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCC--EEEEEc--CCCeEEEEECCCCe
Confidence 4556776544 444455557889999987764 2223333335678999999766 666555 34567777765443
Q ss_pred cEEEE--ecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCc-
Q psy17325 229 RSTII--STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN- 305 (461)
Q Consensus 229 ~~~i~--~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~- 305 (461)
..... ......+..+++.+.+..|+.+.... .|...+++...
T Consensus 86 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----------------------------------~v~i~d~~~~~~ 130 (372)
T 1k8k_C 86 WKPTLVILRINRAARCVRWAPNEKKFAVGSGSR-----------------------------------VISICYFEQEND 130 (372)
T ss_dssp EEEEEECCCCSSCEEEEEECTTSSEEEEEETTS-----------------------------------SEEEEEEETTTT
T ss_pred eeeeEEeecCCCceeEEEECCCCCEEEEEeCCC-----------------------------------EEEEEEecCCCc
Confidence 22221 22234577889988777776665432 23333333222
Q ss_pred ---eEEEEeCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeec-------------------CCCeEE
Q psy17325 306 ---ASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD-------------------GSNRST 361 (461)
Q Consensus 306 ---~~~l~~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~d-------------------G~~~~~ 361 (461)
...+..... +..+++.|.+..|+.+... +.|...++. +.....
T Consensus 131 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-------------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (372)
T 1k8k_C 131 WWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD-------------FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFE 197 (372)
T ss_dssp EEEEEEECTTCCSCEEEEEECTTSSEEEEEETT-------------SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEE
T ss_pred ceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC-------------CCEEEEEcccccccccccccccccccchhhheEe
Confidence 111111111 7888998866655544332 233333321 221222
Q ss_pred EeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEE
Q psy17325 362 IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407 (461)
Q Consensus 362 l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~ 407 (461)
+. ..-.....+++++.+..|+.+ ...+.|...++. ++.....+
T Consensus 198 ~~-~~~~~v~~~~~~~~~~~l~~~-~~d~~i~i~d~~-~~~~~~~~ 240 (372)
T 1k8k_C 198 SS-SSCGWVHGVCFSANGSRVAWV-SHDSTVCLADAD-KKMAVATL 240 (372)
T ss_dssp CC-CCSSCEEEEEECSSSSEEEEE-ETTTEEEEEEGG-GTTEEEEE
T ss_pred cC-CCCCeEEEEEECCCCCEEEEE-eCCCEEEEEECC-CCceeEEE
Confidence 21 334467889998766666655 456788888884 45554443
No 244
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=97.23 E-value=7.6e-05 Score=62.66 Aligned_cols=56 Identities=32% Similarity=0.673 Sum_probs=45.6
Q ss_pred CCCCCCCCCC--CCCCC-CCCcccCCCCCCCC-CceeCCCCceEeCCCCCeecCCCCcee
Q psy17325 14 GKTDCPNGAD--EGPGC-DLAECKHKFGLCSN-TCHPTPLGALCTCPPGEILSNDSVTCQ 69 (461)
Q Consensus 14 ~~~dC~dg~d--e~~~C-~~~~C~~~~~~C~~-~C~~~~~~~~C~C~~G~~l~~~~~~C~ 69 (461)
-...|+.|+. .+..| +++||...+..|.+ .|++++++|.|.|++||.+..++++|.
T Consensus 88 ~~C~C~~Gy~~~~g~~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~~~C~ 147 (147)
T 2w86_A 88 VDPICGKGYSRIKGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGRICL 147 (147)
T ss_dssp CCTTTCTTEEEEETTEEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTTSSCBC
T ss_pred CcccCCCccccCCCCccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCCCCeeC
Confidence 3447998883 34678 68999877777875 799999999999999999888888773
No 245
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.22 E-value=0.11 Score=49.94 Aligned_cols=193 Identities=6% Similarity=-0.107 Sum_probs=106.2
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCC---------------ceeEEEcCCCCceEEEEeecC
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQ---------------PRGMMLDPSPGTRWLFWTDWG 214 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~---------------p~~ia~d~~~g~~~ly~td~~ 214 (461)
.+..+++.+.+..|+.+ ...+.|.+.++........+...... ...+++.+. + .++...
T Consensus 151 ~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~-- 224 (425)
T 1r5m_A 151 PIVSVKWNKDGTHIISM-DVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDD-D--KFVIPG-- 224 (425)
T ss_dssp CEEEEEECTTSSEEEEE-ETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEET-T--EEEEEC--
T ss_pred cEEEEEECCCCCEEEEE-ecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCC-C--EEEEEc--
Confidence 45667777655555544 44688888888655443333322122 667777765 4 444433
Q ss_pred CCCcEEEEecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcce
Q psy17325 215 ENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPL 294 (461)
Q Consensus 215 ~~~~I~~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~ 294 (461)
....|...++........+.........+++.+.+..|+.+....
T Consensus 225 ~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~----------------------------------- 269 (425)
T 1r5m_A 225 PKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDG----------------------------------- 269 (425)
T ss_dssp GGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTS-----------------------------------
T ss_pred CCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCC-----------------------------------
Confidence 346788777775443333333344567888888666665554332
Q ss_pred eeeEEeCCCCc-eEEEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCcee
Q psy17325 295 KIGKANMDGSN-ASILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG 372 (461)
Q Consensus 295 ~I~~~~~~g~~-~~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~g 372 (461)
.|...++.... ...+..... ...+++.|.+ ++++-.. .+.|...++........+...-..+..
T Consensus 270 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~------------d~~i~i~d~~~~~~~~~~~~~~~~i~~ 335 (425)
T 1r5m_A 270 TLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD--KVISCSM------------DGSVRLWSLKQNTLLALSIVDGVPIFA 335 (425)
T ss_dssp CEEEECSSSBSCSEEECCCSSCEEEEEEETTT--EEEEEET------------TSEEEEEETTTTEEEEEEECTTCCEEE
T ss_pred EEEEEECCCCccceEecCCCccEEEEEECCCC--EEEEEeC------------CCcEEEEECCCCcEeEecccCCccEEE
Confidence 24444443322 222221122 7788888765 4443333 445555555433333333244456788
Q ss_pred EEEecCCCeEEEEcCCCCeEEEEEec
Q psy17325 373 LTLDIATRRVYFADSKLDFIDFCNYD 398 (461)
Q Consensus 373 laiD~~~~~ly~~d~~~~~I~~~~~~ 398 (461)
+++.+.+..|+.+ ...+.|...++.
T Consensus 336 ~~~s~~~~~l~~~-~~dg~i~i~~~~ 360 (425)
T 1r5m_A 336 GRISQDGQKYAVA-FMDGQVNVYDLK 360 (425)
T ss_dssp EEECTTSSEEEEE-ETTSCEEEEECH
T ss_pred EEEcCCCCEEEEE-ECCCeEEEEECC
Confidence 9998665555555 445778888873
No 246
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.19 E-value=0.035 Score=58.52 Aligned_cols=230 Identities=8% Similarity=-0.003 Sum_probs=119.8
Q ss_pred eeeeeeeecCCeEEEEeCC--------CCeEEEEeCCCCcEEEEecCC--CCCceeEEEcCCCCceEEEEeecCCCCcEE
Q psy17325 151 VEGLAYDWIGGHIYWLDSR--------LNRIEVCDENGTNRIVLAKDN--ITQPRGMMLDPSPGTRWLFWTDWGENPRIE 220 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~--------~~~I~~~~~~G~~~~~l~~~~--~~~p~~ia~d~~~g~~~ly~td~~~~~~I~ 220 (461)
+..+++.+.++.|.++... .+.|.+.++++...+.+.... -..+..+++.|... +|.++. . ..|+
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~--~la~~~-~--~~i~ 137 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQ--QLIFIF-E--NNIY 137 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTT--CEEEEE-T--TEEE
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCC--EEEEEE-C--CeEE
Confidence 5677888777777666432 267889998776554443321 11266788998865 666655 2 4799
Q ss_pred EEecCCCCcEEEEecccc------------------cceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEE
Q psy17325 221 RIGMDGSNRSTIISTKIY------------------WPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKL 282 (461)
Q Consensus 221 ~~~~dG~~~~~i~~~~~~------------------~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~ 282 (461)
..++++.....+...... .+.++++.+.++.|+++......+..........-.... .+.+
T Consensus 138 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 216 (723)
T 1xfd_A 138 YCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPT-VKPY 216 (723)
T ss_dssp EESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCC-CEEE
T ss_pred EEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCc-ceec
Confidence 999887665555443211 236789998888887764322111100000000000000 0111
Q ss_pred EEEecCCCCcceeeeEEeCCCCce-EEEEeC------Ce-eeeEEEeccCCeEEEeecCceeeEEEeecC-CCCceEEEe
Q psy17325 283 YWIDEGGNGVPLKIGKANMDGSNA-SILVSG------QL-YEALALDLENGMLYYSTLKCTRWLFWTDWG-ENPRIERIG 353 (461)
Q Consensus 283 yw~d~~~~~~~~~I~~~~~~g~~~-~~l~~~------~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~-~~~~I~~~~ 353 (461)
.|...+...-...|.+.++++... ..+... .. ...+++.|.+..|+.+ ++.+ ....|+..+
T Consensus 217 ~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~----------~~~~~~~~~i~~~d 286 (723)
T 1xfd_A 217 HYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTW----------LNRAQNVSILTLCD 286 (723)
T ss_dssp ECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEE----------EETTSCEEEEEEEE
T ss_pred cCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEE----------EcCCCCeEEEEEEe
Confidence 111111111113567777766553 333221 11 4567788766544322 2211 124577777
Q ss_pred ecCCCeEEEee-CCCCC----ceeEEEecCCCeEEEE-cCCCC------eEEEEE
Q psy17325 354 MDGSNRSTIIS-TKIYW----PNGLTLDIATRRVYFA-DSKLD------FIDFCN 396 (461)
Q Consensus 354 ~dG~~~~~l~~-~~l~~----p~glaiD~~~~~ly~~-d~~~~------~I~~~~ 396 (461)
+++.....+.. ..-.+ +..+++.+++++|+++ ....+ .|+.++
T Consensus 287 ~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 287 ATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp TTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred CCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence 76555444432 21122 2478998888888886 43333 677777
No 247
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.18 E-value=0.19 Score=48.66 Aligned_cols=196 Identities=8% Similarity=-0.006 Sum_probs=114.4
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCC-CC
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG-SN 228 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG-~~ 228 (461)
.+..+++.+.+..|+ +-..++.|.+.++........+...-.....+++++ . .|+... ....|...++.. ..
T Consensus 136 ~v~~v~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~--~--~l~~~~--~dg~i~i~d~~~~~~ 208 (401)
T 4aez_A 136 YVASVKWSHDGSFLS-VGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNR--H--VLSSGS--RSGAIHHHDVRIANH 208 (401)
T ss_dssp CEEEEEECTTSSEEE-EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEET--T--EEEEEE--TTSEEEEEETTSSSC
T ss_pred CEEEEEECCCCCEEE-EECCCCeEEEEECcCCeEEEEecCCCCceEEEEECC--C--EEEEEc--CCCCEEEEecccCcc
Confidence 456777776444444 444578899999775554444444435567777754 3 555544 446777777763 33
Q ss_pred cEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEE
Q psy17325 229 RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI 308 (461)
Q Consensus 229 ~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~ 308 (461)
....+........++++.+.+..|+.+.... .|...++.......
T Consensus 209 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~-----------------------------------~v~iwd~~~~~~~~ 253 (401)
T 4aez_A 209 QIGTLQGHSSEVCGLAWRSDGLQLASGGNDN-----------------------------------VVQIWDARSSIPKF 253 (401)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTS-----------------------------------CEEEEETTCSSEEE
T ss_pred eeeEEcCCCCCeeEEEEcCCCCEEEEEeCCC-----------------------------------eEEEccCCCCCccE
Confidence 2333333445678899988655555544332 35555555433333
Q ss_pred EEeCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEc
Q psy17325 309 LVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFAD 386 (461)
Q Consensus 309 l~~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d 386 (461)
.+.... ...+++.|.+..|+.+-.+ ...+.|...++........+ ..-.....+++.+.+..|+.+.
T Consensus 254 ~~~~~~~~v~~~~~~p~~~~ll~~~~g----------s~d~~i~i~d~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~ 322 (401)
T 4aez_A 254 TKTNHNAAVKAVAWCPWQSNLLATGGG----------TMDKQIHFWNAATGARVNTV-DAGSQVTSLIWSPHSKEIMSTH 322 (401)
T ss_dssp EECCCSSCCCEEEECTTSTTEEEEECC----------TTTCEEEEEETTTCCEEEEE-ECSSCEEEEEECSSSSEEEEEE
T ss_pred EecCCcceEEEEEECCCCCCEEEEecC----------CCCCEEEEEECCCCCEEEEE-eCCCcEEEEEECCCCCeEEEEe
Confidence 332222 7899999988877776431 01344555554433332222 2334578899987777777763
Q ss_pred -CCCCeEEEEEec
Q psy17325 387 -SKLDFIDFCNYD 398 (461)
Q Consensus 387 -~~~~~I~~~~~~ 398 (461)
...+.|...++.
T Consensus 323 g~~dg~i~v~~~~ 335 (401)
T 4aez_A 323 GFPDNNLSIWSYS 335 (401)
T ss_dssp CTTTCEEEEEEEE
T ss_pred ecCCCcEEEEecC
Confidence 356788888883
No 248
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.17 E-value=0.19 Score=53.06 Aligned_cols=209 Identities=8% Similarity=0.025 Sum_probs=112.9
Q ss_pred ecCCeEEEEeCC----CCeEEEEeCCCCcEEEEecCC-C-----CCceeEEEcCCCCceEEEEe-ecCCC--CcEEEEec
Q psy17325 158 WIGGHIYWLDSR----LNRIEVCDENGTNRIVLAKDN-I-----TQPRGMMLDPSPGTRWLFWT-DWGEN--PRIERIGM 224 (461)
Q Consensus 158 ~~~~~ly~~d~~----~~~I~~~~~~G~~~~~l~~~~-~-----~~p~~ia~d~~~g~~~ly~t-d~~~~--~~I~~~~~ 224 (461)
+.++.+|++-.. ...|.+.+..+...++++... + ....++++.|... +|.++ +.+.. ..|+..++
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~--~la~~~~~~G~~~~~i~v~d~ 158 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGE--YFAYGLSASGSDWVTIKFMKV 158 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSS--EEEEEEEETTCSCEEEEEEET
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCC--EEEEEEcCCCCceEEEEEEEC
Confidence 346777766432 226788887665555554321 1 1245788888755 66554 42222 38999999
Q ss_pred CCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCC
Q psy17325 225 DGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304 (461)
Q Consensus 225 dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~ 304 (461)
++.....+..... ...+++..+.++.||++......-. ..+. .........|++.++.+.
T Consensus 159 ~tg~~~~~~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~-~~~~------------------~~~~~~~~~v~~~~l~t~ 218 (710)
T 2xdw_A 159 DGAKELPDVLERV-KFSCMAWTHDGKGMFYNAYPQQDGK-SDGT------------------ETSTNLHQKLYYHVLGTD 218 (710)
T ss_dssp TTTEEEEEEEEEE-CSCCEEECTTSSEEEEEECCCCSSC-CSSS------------------CCCCCCCCEEEEEETTSC
T ss_pred CCCCCCcccccCc-ccceEEEEeCCCEEEEEEECCcccc-cccc------------------ccccCCCCEEEEEECCCC
Confidence 8765443322222 2456888877888887654321000 0000 000001135777777654
Q ss_pred ce--EEEEeCCe----eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecC-------C-CeEEEeeCCCCCc
Q psy17325 305 NA--SILVSGQL----YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG-------S-NRSTIISTKIYWP 370 (461)
Q Consensus 305 ~~--~~l~~~~~----p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG-------~-~~~~l~~~~l~~p 370 (461)
.. .++..... ..++++.|.++.|+++... .......|+..++++ . ..+.+. .....-
T Consensus 219 ~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~--------~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~-~~~~~~ 289 (710)
T 2xdw_A 219 QSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIRE--------GCDPVNRLWYCDLQQESNGITGILKWVKLI-DNFEGE 289 (710)
T ss_dssp GGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEEC--------SSSSCCEEEEEEGGGSSSSSCSSCCCEEEE-CSSSSC
T ss_pred cccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEc--------cCCCccEEEEEECcccccccCCccceEEee-CCCCcE
Confidence 42 34444321 4578888888877765432 111145677777764 2 234444 222211
Q ss_pred eeEEEecCCCeEEEEcCC---CCeEEEEEec
Q psy17325 371 NGLTLDIATRRVYFADSK---LDFIDFCNYD 398 (461)
Q Consensus 371 ~glaiD~~~~~ly~~d~~---~~~I~~~~~~ 398 (461)
.-.+++.+++||+.... ..+|..++++
T Consensus 290 -~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~ 319 (710)
T 2xdw_A 290 -YDYVTNEGTVFTFKTNRHSPNYRLINIDFT 319 (710)
T ss_dssp -EEEEEEETTEEEEEECTTCTTCEEEEEETT
T ss_pred -EEEEeccCCEEEEEECCCCCCCEEEEEeCC
Confidence 22466678889887432 4589999984
No 249
>2fyj_A Low-density lipoprotein receptor-related protein 1; double module, complement type repeat, calcium, beta-2 hairpin, loop-structures; NMR {Homo sapiens} PDB: 2fyl_B
Probab=97.14 E-value=0.00014 Score=54.20 Aligned_cols=26 Identities=42% Similarity=1.067 Sum_probs=23.6
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCCCCC
Q psy17325 2 ADRCVNLTKVCDGKTDCPNGADEGPGC 28 (461)
Q Consensus 2 ~~~Ci~~~~~Cd~~~dC~dg~de~~~C 28 (461)
+++||+.+|+|||..||.||+|| ..|
T Consensus 55 ~g~CI~~~~~CDG~~DC~DgSDE-~~C 80 (82)
T 2fyj_A 55 NGRCININWRCDNDNDCGDNSDE-AGC 80 (82)
T ss_dssp TSCEEETTCBSSSSBCCSSSSSC-SCC
T ss_pred CCCeEcHHHccCCCCcCCCCccc-cCC
Confidence 57899999999999999999999 455
No 250
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.13 E-value=0.11 Score=54.72 Aligned_cols=209 Identities=11% Similarity=0.059 Sum_probs=115.9
Q ss_pred eeeeeeeecCCeEEEEeCCCC----eEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCC-----------
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLN----RIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE----------- 215 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~----~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~----------- 215 (461)
..++++.+.++.|.++-...+ .|.+.++++.....+.... ....+++..|... .||++....
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~--~l~~~~~~~~~~~~~~~~~~ 203 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGK--GMFYNAYPQQDGKSDGTETS 203 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSS--EEEEEECCCCSSCCSSSCCC
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCC--EEEEEEECCccccccccccc
Confidence 456777777777766543322 7999998876654332211 1256789988766 788775221
Q ss_pred ---CCcEEEEecCCCCcE-EEEecc---cccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecC
Q psy17325 216 ---NPRIERIGMDGSNRS-TIISTK---IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEG 288 (461)
Q Consensus 216 ---~~~I~~~~~dG~~~~-~i~~~~---~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~ 288 (461)
..+|++.++.+...+ .++... -....++++.+.++.|+++-.....-
T Consensus 204 ~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~-------------------------- 257 (710)
T 2xdw_A 204 TNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDP-------------------------- 257 (710)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSS--------------------------
T ss_pred cCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCC--------------------------
Confidence 234888888654321 233221 12345788888888887764321000
Q ss_pred CCCcceeeeEEeCCC------C--ceEEEEeCCeeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCC--
Q psy17325 289 GNGVPLKIGKANMDG------S--NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSN-- 358 (461)
Q Consensus 289 ~~~~~~~I~~~~~~g------~--~~~~l~~~~~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~-- 358 (461)
. ..|+..++++ . ..+.+........-.+++.++.||+.... -+.+.+|++.++++..
T Consensus 258 ~----~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~---------~~~~~~l~~~d~~~~~~~ 324 (710)
T 2xdw_A 258 V----NRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNR---------HSPNYRLINIDFTDPEES 324 (710)
T ss_dssp C----CEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECT---------TCTTCEEEEEETTSCCGG
T ss_pred c----cEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECC---------CCCCCEEEEEeCCCCCcc
Confidence 0 2466666653 2 23333332222222456667777765332 1125678888887654
Q ss_pred -eEEEeeCCC-CCceeEEEecCCCeEEEEcCCC--CeEEEEEecCCCCe
Q psy17325 359 -RSTIISTKI-YWPNGLTLDIATRRVYFADSKL--DFIDFCNYDGTGRQ 403 (461)
Q Consensus 359 -~~~l~~~~l-~~p~glaiD~~~~~ly~~d~~~--~~I~~~~~~g~g~~ 403 (461)
.+.++...- ....++++. .+++|+++-... .+|+.+++. +|..
T Consensus 325 ~~~~l~~~~~~~~~~~~~~~-~~~~lv~~~~~~g~~~l~~~~~~-~g~~ 371 (710)
T 2xdw_A 325 KWKVLVPEHEKDVLEWVACV-RSNFLVLCYLHDVKNTLQLHDLA-TGAL 371 (710)
T ss_dssp GCEEEECCCSSCEEEEEEEE-TTTEEEEEEEETTEEEEEEEETT-TCCE
T ss_pred cceeccCCCCCCeEEEEEEE-cCCEEEEEEEECCEEEEEEEECC-CCCE
Confidence 255552221 235567774 477888764433 367777772 4543
No 251
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.12 E-value=0.18 Score=47.36 Aligned_cols=215 Identities=7% Similarity=-0.027 Sum_probs=116.8
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCc
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~ 229 (461)
.+..+++.+.+..| ++-..++.|.+.++........+...-.....+++.|... +|+.+. ....|...++.....
T Consensus 34 ~v~~~~~s~~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~--~l~s~~--~dg~i~iwd~~~~~~ 108 (369)
T 3zwl_B 34 PLTQVKYNKEGDLL-FSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTK--YCVTGS--ADYSIKLWDVSNGQC 108 (369)
T ss_dssp CEEEEEECTTSCEE-EEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS--EEEEEE--TTTEEEEEETTTCCE
T ss_pred eEEEEEEcCCCCEE-EEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCC--EEEEEe--CCCeEEEEECCCCcE
Confidence 35566776644444 4444567888888665444444443445678999998755 666554 346788888875544
Q ss_pred EEEEecccccceeEEeeccCCeeEEecCC----CceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCc
Q psy17325 230 STIISTKIYWPNGLTLDIATRRVYFADSK----LDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305 (461)
Q Consensus 230 ~~i~~~~~~~P~glavD~~~~~ly~~d~~----~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~ 305 (461)
...+. .-..+..+++.+.+..|+.+... .+.|. +|=.+..... ..+. ......
T Consensus 109 ~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~------------------~~d~~~~~~~--~~~~--~~~~~~ 165 (369)
T 3zwl_B 109 VATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSIN------------------IYEIERDSAT--HELT--KVSEEP 165 (369)
T ss_dssp EEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEE------------------EEEEEECTTT--CCEE--EECSSC
T ss_pred EEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEE------------------EEEecCCccc--eeec--ccccce
Confidence 33333 34467889999877777665543 12221 1111111100 0111 111111
Q ss_pred eEEEE-eCC--eeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecC-CCeEEEeeCCCCCceeEEEecCCCe
Q psy17325 306 ASILV-SGQ--LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG-SNRSTIISTKIYWPNGLTLDIATRR 381 (461)
Q Consensus 306 ~~~l~-~~~--~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG-~~~~~l~~~~l~~p~glaiD~~~~~ 381 (461)
...+. ... ....++++|.+..|+.+.. .+.|...++.. ......+...-....++++++.+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 232 (369)
T 3zwl_B 166 IHKIITHEGLDAATVAGWSTKGKYIIAGHK-------------DGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTY 232 (369)
T ss_dssp SEEEECCTTCCCEEEEEECGGGCEEEEEET-------------TSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSE
T ss_pred eeeccCCcCccceeEEEEcCCCCEEEEEcC-------------CCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCE
Confidence 22222 222 2677888887776665443 34555555544 2222223244556788999866555
Q ss_pred EEEEcCCCCeEEEEEecCCCCeEEEE
Q psy17325 382 VYFADSKLDFIDFCNYDGTGRQQVIL 407 (461)
Q Consensus 382 ly~~d~~~~~I~~~~~~g~g~~~~~~ 407 (461)
|+.+ ...+.|...++. ++.....+
T Consensus 233 l~~~-~~d~~i~v~d~~-~~~~~~~~ 256 (369)
T 3zwl_B 233 FITS-SRDTNSFLVDVS-TLQVLKKY 256 (369)
T ss_dssp EEEE-ETTSEEEEEETT-TCCEEEEE
T ss_pred EEEe-cCCceEEEEECC-CCceeeee
Confidence 6555 456788888883 45544333
No 252
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=97.10 E-value=0.00028 Score=58.72 Aligned_cols=56 Identities=27% Similarity=0.571 Sum_probs=43.8
Q ss_pred CCCCCCCCCCCCC--CCc---ccCCCCCCCCCceeCCC-CceEeCCCCCeecCCCCceecCcc
Q psy17325 17 DCPNGADEGPGCD--LAE---CKHKFGLCSNTCHPTPL-GALCTCPPGEILSNDSVTCQDMNE 73 (461)
Q Consensus 17 dC~dg~de~~~C~--~~~---C~~~~~~C~~~C~~~~~-~~~C~C~~G~~l~~~~~~C~d~~e 73 (461)
.|+.|+. +..|. +++ |...++.|.+.|.++.+ +|.|.|++||.+..++.+|+++++
T Consensus 71 ~C~~G~~-G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~C~~~~e 132 (142)
T 2c4f_L 71 FCLPAFE-GRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVE 132 (142)
T ss_dssp ECCTTEE-STTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTSSCEEESSS
T ss_pred eCCCCcc-CCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCCCCCCCCCCc
Confidence 3666653 46674 355 44456678889999999 999999999999888999998876
No 253
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=97.09 E-value=0.00019 Score=61.78 Aligned_cols=73 Identities=34% Similarity=0.725 Sum_probs=48.8
Q ss_pred CCCCCCCCCCCCCCCcccCCCCCCCC-CceeCCCCceEeCCCCCeecCCCCcee-cCcceecCCcccC--ceeec-cCCc
Q psy17325 17 DCPNGADEGPGCDLAECKHKFGLCSN-TCHPTPLGALCTCPPGEILSNDSVTCQ-DMNECEQPGYCSQ--MCTNT-KGSY 91 (461)
Q Consensus 17 dC~dg~de~~~C~~~~C~~~~~~C~~-~C~~~~~~~~C~C~~G~~l~~~~~~C~-d~~eC~~~~~C~~--~C~~~-~g~~ 91 (461)
.|+.|+. +..|+ +|...+ .|.+ .|. +++.|.|++||. +..|+ ++++|.....|.+ .|.++ +++|
T Consensus 86 ~C~~G~~-G~~C~--~C~~~~-~C~~g~C~---~~~~C~C~~G~~----G~~C~~~~~~C~~~~~C~~~g~C~~~~~~~~ 154 (169)
T 2vj2_A 86 RCQYGWQ-GLYCD--KCIPHP-GCVHGICN---EPWQCLCETNWG----GQLCDKDLNYCGTHQPCLNGGTCSNTGPDKY 154 (169)
T ss_dssp EECTTEE-SSSSC--EECCCT-TCSSEECS---STTCCEECTTEE----TTTTCEESCHHHHTCCCCTTCEEEECSTTCE
T ss_pred ECCCCCC-CCCcc--cCCCCC-CCCCCCcC---CCCEEeCCCCCC----CCcccCCCCCCCCCCCCCCCCEEcCCCCCCc
Confidence 3555543 34554 344332 2433 354 568899999996 56787 7888875456753 78886 7889
Q ss_pred cccCCCCee
Q psy17325 92 ICSCNEGYV 100 (461)
Q Consensus 92 ~C~C~~g~~ 100 (461)
.|.|++||.
T Consensus 155 ~C~C~~G~~ 163 (169)
T 2vj2_A 155 QCSCPEGYS 163 (169)
T ss_dssp EEECCTTCC
T ss_pred EeECCCCCc
Confidence 999999984
No 254
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=97.08 E-value=0.00025 Score=61.07 Aligned_cols=43 Identities=33% Similarity=0.770 Sum_probs=37.2
Q ss_pred CCCcccCCCCC---CCCCceeCCCCceEeCCCCCeecCCCCceecC
Q psy17325 29 DLAECKHKFGL---CSNTCHPTPLGALCTCPPGEILSNDSVTCQDM 71 (461)
Q Consensus 29 ~~~~C~~~~~~---C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~d~ 71 (461)
++++|...+.. |.+.|.+.+++|.|.|++||.+..++++|+++
T Consensus 123 di~eC~~~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~~~ 168 (170)
T 1szb_A 123 DIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSEQ 168 (170)
T ss_dssp ECCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEECTTSSCEEEC
T ss_pred ccCcccCCCCCCCccCCccccCCCCEEEeCCCCcEECCCCCccccc
Confidence 56789876654 99999999999999999999998889999764
No 255
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.05 E-value=0.44 Score=50.51 Aligned_cols=243 Identities=8% Similarity=0.018 Sum_probs=125.0
Q ss_pred ecCCeEEEEeCCC----CeEEEEeCC---CCcEEEEecCC-C-----CCceeEEEcCCCCceEEEE-eecCCC--CcEEE
Q psy17325 158 WIGGHIYWLDSRL----NRIEVCDEN---GTNRIVLAKDN-I-----TQPRGMMLDPSPGTRWLFW-TDWGEN--PRIER 221 (461)
Q Consensus 158 ~~~~~ly~~d~~~----~~I~~~~~~---G~~~~~l~~~~-~-----~~p~~ia~d~~~g~~~ly~-td~~~~--~~I~~ 221 (461)
+.++.+|++-... ..|.+.+.+ |...++++..+ + ....++++.|... +|.+ ++.+.. ..|+.
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~--~la~~~~~~G~e~~~i~v 193 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGR--LLAYSVQDGGSDWRTVKF 193 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSS--EEEEEEEETTCSEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCC--EEEEEEcCCCCceEEEEE
Confidence 3467777665332 467888876 55555553321 1 1345788888755 5544 443232 57999
Q ss_pred EecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeC
Q psy17325 222 IGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301 (461)
Q Consensus 222 ~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~ 301 (461)
.++++........... ...+++..+. +.||++......-. + ..++. +....|++.++
T Consensus 194 ~dl~tg~~~~~~~~~~-~~~~~~wspD-~~l~~~~~~~~~~~---~---------------~~~~~---~~~~~v~~~~l 250 (741)
T 1yr2_A 194 VGVADGKPLADELKWV-KFSGLAWLGN-DALLYSRFAEPKEG---Q---------------AFQAL---NYNQTVWLHRL 250 (741)
T ss_dssp EETTTCCEEEEEEEEE-ESCCCEESTT-SEEEEEECCCC--------------------------C---CCCCEEEEEET
T ss_pred EECCCCCCCCccCCCc-eeccEEEECC-CEEEEEEecCcccc---c---------------ccccC---CCCCEEEEEEC
Confidence 9998766533321111 1245667666 77777653321000 0 00000 00135677776
Q ss_pred CCCc--eEEEEeCCe----eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCC--C-eEEEeeCCCCCcee
Q psy17325 302 DGSN--ASILVSGQL----YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGS--N-RSTIISTKIYWPNG 372 (461)
Q Consensus 302 ~g~~--~~~l~~~~~----p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~--~-~~~l~~~~l~~p~g 372 (461)
.+.. .+++..... ..++++.|.++.|+++... .+.....|+..++++. . .+.|. .....-..
T Consensus 251 gt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~--------~~~~~~~l~~~d~~~~~~~~~~~l~-~~~~~~~~ 321 (741)
T 1yr2_A 251 GTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSE--------GTDPVNTVHVARVTNGKIGPVTALI-PDLKAQWD 321 (741)
T ss_dssp TSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEEC--------TTCSCCEEEEEEEETTEECCCEEEE-CSSSSCEE
T ss_pred CCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEc--------cCCCcceEEEEECCCCCCcccEEec-CCCCceEE
Confidence 5443 234443321 3467788877776665322 0112457888888765 4 44454 22222222
Q ss_pred EEEecCCCeEEEEcC---CCCeEEEEEecCCC-CeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeCCCceee
Q psy17325 373 LTLDIATRRVYFADS---KLDFIDFCNYDGTG-RQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLK 447 (461)
Q Consensus 373 laiD~~~~~ly~~d~---~~~~I~~~~~~g~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~~~~~i~ 447 (461)
. +++.+++||+.-. ...+|..++++ ++ ...+.+....... ..++++.++.|+++-...+..+
T Consensus 322 ~-~~~dg~~l~~~s~~~~~~~~l~~~d~~-~~~~~~~~l~~~~~~~-----------l~~~~~~~~~lv~~~~~dg~~~ 387 (741)
T 1yr2_A 322 F-VDGVGDQLWFVSGDGAPLKKIVRVDLS-GSTPRFDTVVPESKDN-----------LESVGIAGNRLFASYIHDAKSQ 387 (741)
T ss_dssp E-EEEETTEEEEEECTTCTTCEEEEEECS-SSSCEEEEEECCCSSE-----------EEEEEEEBTEEEEEEEETTEEE
T ss_pred E-EeccCCEEEEEECCCCCCCEEEEEeCC-CCccccEEEecCCCCe-----------EEEEEEECCEEEEEEEECCEEE
Confidence 2 3467888888633 35679999984 22 2333333222111 1244555777777765554443
No 256
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.04 E-value=0.22 Score=46.98 Aligned_cols=193 Identities=10% Similarity=-0.050 Sum_probs=105.7
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEE-EE-ecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCC
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRI-VL-AKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~-~l-~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~ 227 (461)
.+..+++.+.+..| ++-...+.|.+.++...... .+ ....-..+..+++.|... +|+.+. ....|...+++..
T Consensus 54 ~v~~~~~~~~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~--~d~~v~i~d~~~~ 128 (372)
T 1k8k_C 54 QVTGVDWAPDSNRI-VTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEK--KFAVGS--GSRVISICYFEQE 128 (372)
T ss_dssp CEEEEEEETTTTEE-EEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSS--EEEEEE--TTSSEEEEEEETT
T ss_pred cccEEEEeCCCCEE-EEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCC--EEEEEe--CCCEEEEEEecCC
Confidence 45678887644444 44456788999887655422 22 223334578999998866 777665 3356666666654
Q ss_pred Cc----EEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeC--
Q psy17325 228 NR----STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM-- 301 (461)
Q Consensus 228 ~~----~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~-- 301 (461)
.. ..+..........|++.+.+..|+.+.... . |...++
T Consensus 129 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-~----------------------------------i~~~d~~~ 173 (372)
T 1k8k_C 129 NDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF-K----------------------------------CRIFSAYI 173 (372)
T ss_dssp TTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS-C----------------------------------EEEEECCC
T ss_pred CcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCC-C----------------------------------EEEEEccc
Confidence 42 111122234577888887666555544332 2 222221
Q ss_pred -----------------CCCceEEEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEe
Q psy17325 302 -----------------DGSNASILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363 (461)
Q Consensus 302 -----------------~g~~~~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~ 363 (461)
.+.....+..... +..++++|.+..|+.+.. .+.|...++........+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------------d~~i~i~d~~~~~~~~~~ 240 (372)
T 1k8k_C 174 KEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSH-------------DSTVCLADADKKMAVATL 240 (372)
T ss_dssp TTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEET-------------TTEEEEEEGGGTTEEEEE
T ss_pred ccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeC-------------CCEEEEEECCCCceeEEE
Confidence 1222222211112 788899987666655433 345655565433332222
Q ss_pred eCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEe
Q psy17325 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397 (461)
Q Consensus 364 ~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~ 397 (461)
...-.....+++++.+ +++.+- ..+.|...++
T Consensus 241 ~~~~~~v~~~~~~~~~-~~l~~~-~d~~i~i~~~ 272 (372)
T 1k8k_C 241 ASETLPLLAVTFITES-SLVAAG-HDCFPVLFTY 272 (372)
T ss_dssp ECSSCCEEEEEEEETT-EEEEEE-TTSSCEEEEE
T ss_pred ccCCCCeEEEEEecCC-CEEEEE-eCCeEEEEEc
Confidence 2444456889998554 444443 5566777776
No 257
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.00 E-value=0.22 Score=46.13 Aligned_cols=193 Identities=6% Similarity=-0.008 Sum_probs=107.5
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcE
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS 230 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~ 230 (461)
+..+++.+.+. +..+-..++.|.+.+.........+.........+++.|... +|+.+. ....|...++......
T Consensus 26 v~~~~~s~~~~-~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~--~l~s~~--~d~~i~vwd~~~~~~~ 100 (312)
T 4ery_A 26 VSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN--LLVSAS--DDKTLKIWDVSSGKCL 100 (312)
T ss_dssp EEEEEECTTSS-EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS--EEEEEE--TTSEEEEEETTTCCEE
T ss_pred EEEEEECCCCC-EEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCC--EEEEEC--CCCEEEEEECCCCcEE
Confidence 45566665444 444555577888888754444444444445578899999765 666554 3457777777644433
Q ss_pred EEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEE
Q psy17325 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILV 310 (461)
Q Consensus 231 ~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~ 310 (461)
..+.........+++.+.+..|+.+.... .|...++........+
T Consensus 101 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d~-----------------------------------~i~iwd~~~~~~~~~~ 145 (312)
T 4ery_A 101 KTLKGHSNYVFCCNFNPQSNLIVSGSFDE-----------------------------------SVRIWDVKTGKCLKTL 145 (312)
T ss_dssp EEEECCSSCEEEEEECSSSSEEEEEETTS-----------------------------------CEEEEETTTCCEEEEE
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEeCCC-----------------------------------cEEEEECCCCEEEEEe
Confidence 33333334566788887666655544332 3455555433322222
Q ss_pred eCC-e-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecC-CCeEEEeeCCCCCceeEEEecCCCeEEEEcC
Q psy17325 311 SGQ-L-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG-SNRSTIISTKIYWPNGLTLDIATRRVYFADS 387 (461)
Q Consensus 311 ~~~-~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG-~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~ 387 (461)
... . ...+++.|.+..|+.+.. .+.|...++.. .....+..........+++++.+..|..+ .
T Consensus 146 ~~~~~~v~~~~~~~~~~~l~~~~~-------------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~ 211 (312)
T 4ery_A 146 PAHSDPVSAVHFNRDGSLIVSSSY-------------DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA-T 211 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEET-------------TSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEE-E
T ss_pred cCCCCcEEEEEEcCCCCEEEEEeC-------------CCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEE-c
Confidence 222 2 678888886665554433 33444444432 22223332233344668888666666555 4
Q ss_pred CCCeEEEEEe
Q psy17325 388 KLDFIDFCNY 397 (461)
Q Consensus 388 ~~~~I~~~~~ 397 (461)
..+.|...++
T Consensus 212 ~d~~i~iwd~ 221 (312)
T 4ery_A 212 LDNTLKLWDY 221 (312)
T ss_dssp TTTEEEEEET
T ss_pred CCCeEEEEEC
Confidence 4578888888
No 258
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=96.97 E-value=0.0063 Score=61.71 Aligned_cols=110 Identities=13% Similarity=0.176 Sum_probs=77.9
Q ss_pred EcCccceeeeeeeecCCeEEEEeCC---------------------CCeEEEEeCCCCc--------EEEEec-------
Q psy17325 145 VSGLDLVEGLAYDWIGGHIYWLDSR---------------------LNRIEVCDENGTN--------RIVLAK------- 188 (461)
Q Consensus 145 ~~g~~~p~~iavd~~~~~ly~~d~~---------------------~~~I~~~~~~G~~--------~~~l~~------- 188 (461)
.+.+.+||++++++.++.||++=++ .++|.+...++.. ...++.
T Consensus 380 AT~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~ 459 (592)
T 4a9v_A 380 ATRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHA 459 (592)
T ss_dssp CCCEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTST
T ss_pred CccccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCcccc
Confidence 3556789999999999999998543 3789888865421 122221
Q ss_pred -------------CCCCCceeEEEcCCCCceEEEE-eecC----------CCCcEEEEecCCCCcEEEEec-ccccceeE
Q psy17325 189 -------------DNITQPRGMMLDPSPGTRWLFW-TDWG----------ENPRIERIGMDGSNRSTIIST-KIYWPNGL 243 (461)
Q Consensus 189 -------------~~~~~p~~ia~d~~~g~~~ly~-td~~----------~~~~I~~~~~dG~~~~~i~~~-~~~~P~gl 243 (461)
..+..|.+|++|+. | .||+ +|-. .+..+++...+....+.++.. ....|+||
T Consensus 460 ~~~~~g~~~~~~~~~fnsPDnL~fd~~-G--~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGi 536 (592)
T 4a9v_A 460 GTPKGGSSNITPQNMFNSPDGLGFDKA-G--RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGI 536 (592)
T ss_dssp TSGGGCCTTCCTTTCCCCEEEEEECTT-C--CEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEE
T ss_pred cccccCccCccccCccCCCCceEECCC-C--CEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCC
Confidence 12678999999987 5 6888 8832 124788888864444444432 34579999
Q ss_pred EeeccCCeeEEecC
Q psy17325 244 TLDIATRRVYFADS 257 (461)
Q Consensus 244 avD~~~~~ly~~d~ 257 (461)
++.+..+.||++-.
T Consensus 537 afSPD~ktLfV~vQ 550 (592)
T 4a9v_A 537 SFSPDQKTLFVGIQ 550 (592)
T ss_dssp EECTTSSEEEEEEE
T ss_pred EECCCCCEEEEEEe
Confidence 99999999998754
No 259
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=96.96 E-value=0.00037 Score=59.21 Aligned_cols=44 Identities=39% Similarity=0.815 Sum_probs=38.2
Q ss_pred ceecCcceecC--CcccCceeeccCCccccCCCCeeeeCCCCceee
Q psy17325 67 TCQDMNECEQP--GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110 (461)
Q Consensus 67 ~C~d~~eC~~~--~~C~~~C~~~~g~~~C~C~~g~~l~~~~~~C~~ 110 (461)
.|.+++||... ..|++.|.|..++|.|.|.+||.|..++++|.+
T Consensus 113 ~~~d~~eC~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~~~~~C~~ 158 (159)
T 1nzi_A 113 VATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGV 158 (159)
T ss_dssp EEEECCTTTC-CCCCSSSEEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred ecccCcccCCCCCCCCCCcccCcCCCEEEecCCCcEECCCCCcccc
Confidence 47788999743 479999999999999999999999999999964
No 260
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.95 E-value=0.32 Score=47.33 Aligned_cols=102 Identities=12% Similarity=0.001 Sum_probs=60.5
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCc
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~ 229 (461)
.+..+++.+. +.+.++-..++.|.+.++........+...-.....+++.|... +|.-+. ....|...++.+...
T Consensus 110 ~V~~~~~~p~-~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~--~l~sgs--~D~~i~iwd~~~~~~ 184 (410)
T 1vyh_C 110 PVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK--LLASCS--ADMTIKLWDFQGFEC 184 (410)
T ss_dssp CEEEEEECSS-SSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSS--EEEEEE--TTSCCCEEETTSSCE
T ss_pred cEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCC--EEEEEe--CCCeEEEEeCCCCce
Confidence 4556777654 45666667788999999765443333333335578899998755 555443 345666666665433
Q ss_pred EEEEecccccceeEEeeccCCeeEEec
Q psy17325 230 STIISTKIYWPNGLTLDIATRRVYFAD 256 (461)
Q Consensus 230 ~~i~~~~~~~P~glavD~~~~~ly~~d 256 (461)
...+.........+++.+.++.|+-+.
T Consensus 185 ~~~~~~h~~~V~~v~~~p~~~~l~s~s 211 (410)
T 1vyh_C 185 IRTMHGHDHNVSSVSIMPNGDHIVSAS 211 (410)
T ss_dssp EECCCCCSSCEEEEEECSSSSEEEEEE
T ss_pred eEEEcCCCCCEEEEEEeCCCCEEEEEe
Confidence 222222234567788887666555443
No 261
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.95 E-value=0.33 Score=47.32 Aligned_cols=202 Identities=10% Similarity=0.105 Sum_probs=110.3
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCc
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~ 229 (461)
.+..+++.+ .+++..+-..++.|.+.++.+......+...-.....+++.|... +|+-+. ....|...++.....
T Consensus 152 ~V~~v~~~~-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~--~l~s~s--~D~~i~~wd~~~~~~ 226 (410)
T 1vyh_C 152 SVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGD--HIVSAS--RDKTIKMWEVQTGYC 226 (410)
T ss_dssp CEEEEEECT-TSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSS--EEEEEE--TTSEEEEEETTTCCE
T ss_pred cEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCC--EEEEEe--CCCeEEEEECCCCcE
Confidence 456677775 455666767788999999877655444444445678899999755 555444 346777777764333
Q ss_pred EEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEE
Q psy17325 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL 309 (461)
Q Consensus 230 ~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l 309 (461)
...+.........+++.+.+..|.-+.. .+ .|...++........
T Consensus 227 ~~~~~~h~~~v~~~~~~~~g~~l~s~s~-D~----------------------------------~v~vwd~~~~~~~~~ 271 (410)
T 1vyh_C 227 VKTFTGHREWVRMVRPNQDGTLIASCSN-DQ----------------------------------TVRVWVVATKECKAE 271 (410)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEET-TS----------------------------------CEEEEETTTCCEEEE
T ss_pred EEEEeCCCccEEEEEECCCCCEEEEEcC-CC----------------------------------eEEEEECCCCceeeE
Confidence 2233333345566777765444433332 22 244444433322222
Q ss_pred EeCCe--eeeEEEeccC-------------------CeEEEeecCceeeEEEeecCCCCceEEEeecCCC-eEEEeeCCC
Q psy17325 310 VSGQL--YEALALDLEN-------------------GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSN-RSTIISTKI 367 (461)
Q Consensus 310 ~~~~~--p~~iavd~~~-------------------~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~-~~~l~~~~l 367 (461)
+.... ...+++.|.. +.+.++-.. .+.|...++.... ...+. ..-
T Consensus 272 ~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~------------D~~i~iwd~~~~~~~~~~~-~h~ 338 (410)
T 1vyh_C 272 LREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSR------------DKTIKMWDVSTGMCLMTLV-GHD 338 (410)
T ss_dssp ECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEET------------TSEEEEEETTTTEEEEEEE-CCS
T ss_pred ecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeC------------CCeEEEEECCCCceEEEEE-CCC
Confidence 22111 5666666642 223333222 3445555544322 22333 445
Q ss_pred CCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEE
Q psy17325 368 YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406 (461)
Q Consensus 368 ~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~ 406 (461)
.+..+|++++.+..|+.+ ...+.|...++. ++.....
T Consensus 339 ~~v~~v~~~~~g~~l~s~-s~D~~i~vwd~~-~~~~~~~ 375 (410)
T 1vyh_C 339 NWVRGVLFHSGGKFILSC-ADDKTLRVWDYK-NKRCMKT 375 (410)
T ss_dssp SCEEEEEECSSSSCEEEE-ETTTEEEEECCT-TSCCCEE
T ss_pred CcEEEEEEcCCCCEEEEE-eCCCeEEEEECC-CCceEEE
Confidence 567889998665555544 456788888883 4443333
No 262
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.91 E-value=0.00082 Score=48.44 Aligned_cols=67 Identities=21% Similarity=0.325 Sum_probs=44.4
Q ss_pred CCCcccCCCCCCCC--CceeCCCCceEe-CCCCCeecCCCCceecCcceecCCcccCceeeccCCccccCCCCeeeeCCC
Q psy17325 29 DLAECKHKFGLCSN--TCHPTPLGALCT-CPPGEILSNDSVTCQDMNECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDN 105 (461)
Q Consensus 29 ~~~~C~~~~~~C~~--~C~~~~~~~~C~-C~~G~~l~~~~~~C~d~~eC~~~~~C~~~C~~~~g~~~C~C~~g~~l~~~~ 105 (461)
+++||...+..|.. .|++++++|.|. |..||....++..+.. .+ ..+...+.|++||++. ++
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~~~~~~~--~~------------~~~~~~~~C~~Gy~~~-~~ 66 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHGEGPPP--PV------------PPAQHPNPCPPGYEPD-DQ 66 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCCSCSSCCC--SS------------CSCSSCCCSCTTEEEE-CC
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEecccCCcccccccCCcccc--cc------------ccCccccCCCCCeeeC-CC
Confidence 46788776667854 699999999997 5578876555543311 11 1122356899999998 45
Q ss_pred Cceee
Q psy17325 106 HTCKA 110 (461)
Q Consensus 106 ~~C~~ 110 (461)
.+|.|
T Consensus 67 ~~C~D 71 (71)
T 2kl7_A 67 DSCVD 71 (71)
T ss_dssp CCSCC
T ss_pred CcccC
Confidence 56754
No 263
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.91 E-value=0.28 Score=45.92 Aligned_cols=197 Identities=6% Similarity=-0.043 Sum_probs=100.7
Q ss_pred ceeeeeeeecC--CeEEEEeCCCCeEEEEeCCCCc-EEEEecCCCCCceeEE------EcCCCCceEEEEeecCCCCcEE
Q psy17325 150 LVEGLAYDWIG--GHIYWLDSRLNRIEVCDENGTN-RIVLAKDNITQPRGMM------LDPSPGTRWLFWTDWGENPRIE 220 (461)
Q Consensus 150 ~p~~iavd~~~--~~ly~~d~~~~~I~~~~~~G~~-~~~l~~~~~~~p~~ia------~d~~~g~~~ly~td~~~~~~I~ 220 (461)
.+..+++.+.. +.++++-...+.|.+.++.... ....+.........++ +.+... .|+.+. ....|.
T Consensus 67 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~--~l~~~~--~d~~i~ 142 (357)
T 3i2n_A 67 PIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAP--EIVTGS--RDGTVK 142 (357)
T ss_dssp CEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCC--EEEEEE--TTSCEE
T ss_pred cEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCcc--EEEEEe--CCCeEE
Confidence 34566666553 4666666667899999977554 2223333334456664 345544 555544 345777
Q ss_pred EEecCCCC-cEEEEecc----cccceeEE----eeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCC
Q psy17325 221 RIGMDGSN-RSTIISTK----IYWPNGLT----LDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNG 291 (461)
Q Consensus 221 ~~~~dG~~-~~~i~~~~----~~~P~gla----vD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~ 291 (461)
..++.... ....+... ......++ +.+.+..|+.+...
T Consensus 143 vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d--------------------------------- 189 (357)
T 3i2n_A 143 VWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN--------------------------------- 189 (357)
T ss_dssp EECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT---------------------------------
T ss_pred EEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC---------------------------------
Confidence 77776443 22222111 11333444 44444444443322
Q ss_pred cceeeeEEeCCCCceEEEEeCCe-eeeEEEec---cCCeEEEeecCceeeEEEeecCCCCceEEEeecCC-CeEEE----
Q psy17325 292 VPLKIGKANMDGSNASILVSGQL-YEALALDL---ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGS-NRSTI---- 362 (461)
Q Consensus 292 ~~~~I~~~~~~g~~~~~l~~~~~-p~~iavd~---~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~-~~~~l---- 362 (461)
+.|...++............. ...+++.| .+..|+.+.. .+.|...++... ....+
T Consensus 190 --~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-------------dg~i~i~d~~~~~~~~~~~~~~ 254 (357)
T 3i2n_A 190 --GDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSL-------------EGKFHVFDMRTQHPTKGFASVS 254 (357)
T ss_dssp --SEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEES-------------TTEEEEEEEEEEETTTEEEEEE
T ss_pred --CeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECC-------------CCeEEEEeCcCCCcccceeeec
Confidence 235555655544433332222 78889988 5565555433 233433333211 11111
Q ss_pred eeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEec
Q psy17325 363 ISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398 (461)
Q Consensus 363 ~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~ 398 (461)
....-.....+++.+.+..++++-...+.|...++.
T Consensus 255 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 290 (357)
T 3i2n_A 255 EKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYE 290 (357)
T ss_dssp EECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEE
T ss_pred cCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecC
Confidence 113445677888886555466665666788877773
No 264
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.89 E-value=0.35 Score=46.68 Aligned_cols=95 Identities=12% Similarity=0.074 Sum_probs=62.6
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEeccccc
Q psy17325 160 GGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYW 239 (461)
Q Consensus 160 ~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~~~~~ 239 (461)
.++++++-...+.|.+.++........+.........+++.|... +|+.+. ....|...++........+......
T Consensus 108 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~--~l~s~s--~d~~i~iwd~~~~~~~~~~~~h~~~ 183 (420)
T 3vl1_A 108 QMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGE--ALISSS--QDMQLKIWSVKDGSNPRTLIGHRAT 183 (420)
T ss_dssp SSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSS--EEEEEE--TTSEEEEEETTTCCCCEEEECCSSC
T ss_pred CCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCC--EEEEEe--CCCeEEEEeCCCCcCceEEcCCCCc
Confidence 455566666678899999887766555544446688999999755 666554 3467888887643333333333456
Q ss_pred ceeEEeeccCCeeEEecCC
Q psy17325 240 PNGLTLDIATRRVYFADSK 258 (461)
Q Consensus 240 P~glavD~~~~~ly~~d~~ 258 (461)
...+++.+.+..|+.+...
T Consensus 184 v~~~~~~~~~~~l~s~~~d 202 (420)
T 3vl1_A 184 VTDIAIIDRGRNVLSASLD 202 (420)
T ss_dssp EEEEEEETTTTEEEEEETT
T ss_pred EEEEEEcCCCCEEEEEcCC
Confidence 7889998877666655443
No 265
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=96.88 E-value=0.00022 Score=65.64 Aligned_cols=45 Identities=18% Similarity=0.399 Sum_probs=35.5
Q ss_pred CCCcccCCCCCCCC--CceeCCCCceEeCCCCCeecCCCCceecCccee
Q psy17325 29 DLAECKHKFGLCSN--TCHPTPLGALCTCPPGEILSNDSVTCQDMNECE 75 (461)
Q Consensus 29 ~~~~C~~~~~~C~~--~C~~~~~~~~C~C~~G~~l~~~~~~C~d~~eC~ 75 (461)
+++||......|.. .|.|++++|.|.|++||. .++..|.+++++.
T Consensus 4 DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~--GnG~~C~d~d~Pq 50 (285)
T 1gl4_A 4 AQQTCANNRHQCSVHAECRDYATGFCCRCVANYT--GNGRQCVAEGSPQ 50 (285)
T ss_dssp ---CHHHHGGGSCTTEEEEECSSCEEEEECTTEE--ECSSSEEETTCEE
T ss_pred cchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCC--CCCCcCCCCCCCc
Confidence 46788866677864 599999999999999997 4778999998864
No 266
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=96.86 E-value=0.00062 Score=42.67 Aligned_cols=36 Identities=22% Similarity=0.426 Sum_probs=25.8
Q ss_pred CCcccCCCCCCCCCceeCCCCceEeCCCCCeecCCCCcee
Q psy17325 30 LAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ 69 (461)
Q Consensus 30 ~~~C~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~ 69 (461)
+++|..++......|.+..++|.|.|++||. +..|+
T Consensus 3 ~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~----G~~Ce 38 (39)
T 1edm_B 3 GDQCESNPCLNGGSCKDDINSYECWCPFGFE----GKNCE 38 (39)
T ss_dssp CCTTTTCCCCTTCEEEEETTEEEEECCTTCC----STTSC
T ss_pred cccCCCCCCCCCCEeEcCCCceEeECCCCCc----CCccC
Confidence 4567655433345799999999999999995 45554
No 267
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.86 E-value=0.26 Score=51.86 Aligned_cols=241 Identities=8% Similarity=-0.019 Sum_probs=124.2
Q ss_pred ecCCeEEEEeCCC----CeEEEEeCCCCcEEEEecCC-C-----CCceeEEEcCCCCceEEEEe-ecCC--CCcEEEEec
Q psy17325 158 WIGGHIYWLDSRL----NRIEVCDENGTNRIVLAKDN-I-----TQPRGMMLDPSPGTRWLFWT-DWGE--NPRIERIGM 224 (461)
Q Consensus 158 ~~~~~ly~~d~~~----~~I~~~~~~G~~~~~l~~~~-~-----~~p~~ia~d~~~g~~~ly~t-d~~~--~~~I~~~~~ 224 (461)
+.++.+|++-... ..|.+.+.+|...++++..+ + ....++++.|... +|.++ +.+. ...|+..++
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~--~la~~~~~~G~~~~~i~v~dl 154 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGK--KVAFAQKPNAADEAVLHVIDV 154 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSS--EEEEEEEETTCSCCEEEEEET
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCC--EEEEEECCCCCceEEEEEEEC
Confidence 3467777765432 46788887766666665421 1 1356788888755 55444 4332 268999999
Q ss_pred CCCCcEEEEeccccc--ceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCC
Q psy17325 225 DGSNRSTIISTKIYW--PNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMD 302 (461)
Q Consensus 225 dG~~~~~i~~~~~~~--P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~ 302 (461)
++..... ...+.. ..+++..+.++.||++......-... + .......|++.+++
T Consensus 155 ~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~-------------------~---~~~~~~~v~~~~l~ 210 (695)
T 2bkl_A 155 DSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKV-------------------D---ERPGYTTIRYHTLG 210 (695)
T ss_dssp TTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCG-------------------G---GGGGGCEEEEEETT
T ss_pred CCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCcc-------------------c---cCCCCCEEEEEECC
Confidence 8765420 111211 15677777777787765432100000 0 00011357777777
Q ss_pred CCc--eEEEEeCCe----eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEe
Q psy17325 303 GSN--ASILVSGQL----YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLD 376 (461)
Q Consensus 303 g~~--~~~l~~~~~----p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD 376 (461)
+.. .+.+..... ..++++.|.+..|+++.... .....|+..+..+...+.|. ...........
T Consensus 211 t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~---------~~~~~l~~~~~~~~~~~~l~-~~~~~~~~~~~- 279 (695)
T 2bkl_A 211 TEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRG---------WSENDVYWKRPGEKDFRLLV-KGVGAKYEVHA- 279 (695)
T ss_dssp SCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEET---------TTEEEEEEECTTCSSCEEEE-ECSSCCEEEEE-
T ss_pred CCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCC---------CCceEEEEEcCCCCceEEee-cCCCceEEEEe-
Confidence 554 234444321 45788888888777654320 01235555554444444444 22222222222
Q ss_pred cCCCeEEEEcC---CCCeEEEEEecCCCCe---EEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeCCCceeec
Q psy17325 377 IATRRVYFADS---KLDFIDFCNYDGTGRQ---QVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKT 448 (461)
Q Consensus 377 ~~~~~ly~~d~---~~~~I~~~~~~g~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~~~~~i~~ 448 (461)
+.++ ||+... ...+|..++++ ++.. +.++... .... ..++++.++.|+++-...+..++
T Consensus 280 ~~g~-l~~~s~~~~~~~~l~~~d~~-~~~~~~~~~l~~~~-~~~~----------l~~~~~~~~~lv~~~~~dg~~~l 344 (695)
T 2bkl_A 280 WKDR-FYVLTDEGAPRQRVFEVDPA-KPARASWKEIVPED-SSAS----------LLSVSIVGGHLSLEYLKDATSEV 344 (695)
T ss_dssp ETTE-EEEEECTTCTTCEEEEEBTT-BCSGGGCEEEECCC-SSCE----------EEEEEEETTEEEEEEEETTEEEE
T ss_pred cCCc-EEEEECCCCCCCEEEEEeCC-CCCccCCeEEecCC-CCCe----------EEEEEEECCEEEEEEEECCEEEE
Confidence 3455 776533 35789999984 2331 2333221 1111 12345557777777665554443
No 268
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=96.85 E-value=0.0002 Score=49.80 Aligned_cols=43 Identities=26% Similarity=0.410 Sum_probs=30.6
Q ss_pred CCcccCCCCCCC--CCceeCCCCceEeCCCCCeecCCCCceecCccee
Q psy17325 30 LAECKHKFGLCS--NTCHPTPLGALCTCPPGEILSNDSVTCQDMNECE 75 (461)
Q Consensus 30 ~~~C~~~~~~C~--~~C~~~~~~~~C~C~~G~~l~~~~~~C~d~~eC~ 75 (461)
.++|..+++.-. ..|.+.+++|.|.|++||.+ +..|++.++|.
T Consensus 11 ~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~---G~~C~~~~~C~ 55 (61)
T 2k2s_B 11 PAACSSNPCGPEAAGTCKETNSGYICRCNQGYRI---SLDGTGNVTCI 55 (61)
T ss_dssp CCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEE---EECSSSCEEEE
T ss_pred CCcCcCCCCcCCCccccccCCCceEeECCCCCcc---CCCCCCCCEec
Confidence 467776553333 46999999999999999962 34677666664
No 269
>2gtl_M Hemoglobin linker chain L1; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=96.80 E-value=0.0003 Score=61.86 Aligned_cols=24 Identities=38% Similarity=0.916 Sum_probs=22.5
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCC
Q psy17325 2 ADRCVNLTKVCDGKTDCPNGADEG 25 (461)
Q Consensus 2 ~~~Ci~~~~~Cd~~~dC~dg~de~ 25 (461)
+|+||+.+|+|||..||+||+||.
T Consensus 65 ~g~CI~~~~~CDG~~DC~DgSDE~ 88 (217)
T 2gtl_M 65 VPECIHDLLFCDGEKDCRDGSDED 88 (217)
T ss_dssp SCCEEEGGGTTSSSCCSSSSTTTS
T ss_pred CCcEechhhccCCCCCCCCCCccc
Confidence 479999999999999999999994
No 270
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.77 E-value=0.39 Score=45.83 Aligned_cols=154 Identities=10% Similarity=0.082 Sum_probs=95.2
Q ss_pred CCceeEEEcCCC-CceEEEEeecCCCCcEEEEecCCCCcEEEEe--cccccceeEEeeccC-CeeEEecCCCceeeeccc
Q psy17325 192 TQPRGMMLDPSP-GTRWLFWTDWGENPRIERIGMDGSNRSTIIS--TKIYWPNGLTLDIAT-RRVYFADSKLDFIDCKSL 267 (461)
Q Consensus 192 ~~p~~ia~d~~~-g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~--~~~~~P~glavD~~~-~~ly~~d~~~~~i~~~~~ 267 (461)
.....+++.|.. . +|+... ....|...++........+. ........+++.+.+ ..|+.+.. .
T Consensus 74 ~~v~~~~~~~~~~~--~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~-d-------- 140 (383)
T 3ei3_B 74 RRVTSLEWHPTHPT--TVAVGS--KGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSI-R-------- 140 (383)
T ss_dssp SCEEEEEECSSCTT--EEEEEE--BTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEET-T--------
T ss_pred CCEEEEEECCCCCC--EEEEEc--CCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeC-C--------
Confidence 456788888876 4 555544 34578888887655544443 233456788887733 44444333 2
Q ss_pred ceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCC---e-eeeEEEeccCCeEEEeecCceeeEEEeec
Q psy17325 268 EIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQ---L-YEALALDLENGMLYYSTLKCTRWLFWTDW 343 (461)
Q Consensus 268 ~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~---~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~ 343 (461)
+.|...++.+.....+.... . ...+++.|.+..|+....
T Consensus 141 --------------------------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------- 183 (383)
T 3ei3_B 141 --------------------------GATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDS----------- 183 (383)
T ss_dssp --------------------------TEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEET-----------
T ss_pred --------------------------CEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECC-----------
Confidence 24566666665544444332 1 778999987776654433
Q ss_pred CCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEec
Q psy17325 344 GENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398 (461)
Q Consensus 344 ~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~ 398 (461)
.+.|...++++.....+. ..-.....|++.+.+..++++-...+.|...++.
T Consensus 184 --d~~i~i~d~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 235 (383)
T 3ei3_B 184 --TGRLLLLGLDGHEIFKEK-LHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLR 235 (383)
T ss_dssp --TSEEEEEETTSCEEEEEE-CSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGG
T ss_pred --CCCEEEEECCCCEEEEec-cCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCC
Confidence 456666666665555544 4556788899987766466665667788888883
No 271
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.76 E-value=0.37 Score=45.19 Aligned_cols=98 Identities=9% Similarity=-0.010 Sum_probs=61.8
Q ss_pred ceeeeeeeecCCeEEEEeCC----CCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecC-----------
Q psy17325 150 LVEGLAYDWIGGHIYWLDSR----LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG----------- 214 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~----~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~----------- 214 (461)
.+..+++.+.++.|+++... ...|.+.++++.....+.... . ..++++.|... .|+++...
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~--~l~~~~~~~~~~~~~~~~~ 135 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSR--KLLIVGFKRREDEDFIFED 135 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSS--EEEEEEECCCC--------
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCC--EEEEEEccCCCcCCcEEEc
Confidence 35566777777778776543 335888898877655554433 2 77888988755 77766421
Q ss_pred --------------CCCcEEEEecCCCCc-EEEEecccccceeEEeeccCCeeEEe
Q psy17325 215 --------------ENPRIERIGMDGSNR-STIISTKIYWPNGLTLDIATRRVYFA 255 (461)
Q Consensus 215 --------------~~~~I~~~~~dG~~~-~~i~~~~~~~P~glavD~~~~~ly~~ 255 (461)
....|++.++++... +.+.. . ....+++.+.+ .+|.+
T Consensus 136 ~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~--~~~~~~~spdg-~~~~~ 187 (347)
T 2gop_A 136 DVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P--RFSSGIWHRDK-IVVNV 187 (347)
T ss_dssp -CCCC---------CEEEEEEEETTTTEEEEEEEE-E--TTCEEEEETTE-EEEEE
T ss_pred ccceeecCcccccCccceEEEEECCCCeEEeeecC-C--CcccccCCCCe-EEEEE
Confidence 125788888876554 44433 2 56677787755 44444
No 272
>2fcw_B LDL receptor, low-density lipoprotein receptor; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: g.12.1.1 g.12.1.1 PDB: 2kri_B
Probab=96.75 E-value=0.00025 Score=52.42 Aligned_cols=24 Identities=33% Similarity=0.776 Sum_probs=22.5
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCC
Q psy17325 2 ADRCVNLTKVCDGKTDCPNGADEG 25 (461)
Q Consensus 2 ~~~Ci~~~~~Cd~~~dC~dg~de~ 25 (461)
+++||+.+|+|||..||.||+||.
T Consensus 51 ~g~Ci~~~~~CDg~~DC~dgsDE~ 74 (80)
T 2fcw_B 51 SSTCIPQLWACDNDPDCEDGSDEW 74 (80)
T ss_dssp TSCEEEGGGTTSSSCCSTTCGGGC
T ss_pred CCCEEecccccCCCcCCCCCCCcC
Confidence 578999999999999999999994
No 273
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.74 E-value=0.22 Score=46.63 Aligned_cols=76 Identities=8% Similarity=0.042 Sum_probs=45.9
Q ss_pred ceeeeeeeecCCeEEEEeCC---CCeEEEEeCCCCcEEEEec-CCCCCceeEEEcCCC--CceEEEEeecCCCCcEEEEe
Q psy17325 150 LVEGLAYDWIGGHIYWLDSR---LNRIEVCDENGTNRIVLAK-DNITQPRGMMLDPSP--GTRWLFWTDWGENPRIERIG 223 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~---~~~I~~~~~~G~~~~~l~~-~~~~~p~~ia~d~~~--g~~~ly~td~~~~~~I~~~~ 223 (461)
.+..+++.+.+..+..+-.. ++.|.+.++++.....+.. ........+++.|.. | ++|+... ....|...+
T Consensus 20 ~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~l~~~~--~dg~i~iwd 96 (357)
T 3i2n_A 20 TVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQ-RYLATGD--FGGNLHIWN 96 (357)
T ss_dssp CEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTT-CCEEEEE--TTSCEEEEC
T ss_pred ceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCC-ceEEEec--CCCeEEEEe
Confidence 35566776656666666554 7889998877655433221 222457889998873 3 1555544 346777777
Q ss_pred cCCCC
Q psy17325 224 MDGSN 228 (461)
Q Consensus 224 ~dG~~ 228 (461)
+....
T Consensus 97 ~~~~~ 101 (357)
T 3i2n_A 97 LEAPE 101 (357)
T ss_dssp TTSCS
T ss_pred CCCCC
Confidence 76543
No 274
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=96.73 E-value=0.013 Score=59.52 Aligned_cols=119 Identities=14% Similarity=0.211 Sum_probs=76.7
Q ss_pred CCCCCceeEEEcCCCCceEEEEeecC--------------------CCCcEEEEecCCCC-------cEEEEec------
Q psy17325 189 DNITQPRGMMLDPSPGTRWLFWTDWG--------------------ENPRIERIGMDGSN-------RSTIIST------ 235 (461)
Q Consensus 189 ~~~~~p~~ia~d~~~g~~~ly~td~~--------------------~~~~I~~~~~dG~~-------~~~i~~~------ 235 (461)
..+.+|.+|+++|.+| .||++--+ ...+|+|...++.. ...++..
T Consensus 381 T~mdRpEdi~v~p~~g--~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~ 458 (592)
T 4a9v_A 381 TRMDRPEWIVVSPKDG--QVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVH 458 (592)
T ss_dssp CCEECEEEEEECTTTC--CEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTS
T ss_pred ccccCccceeEcCCCC--EEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccc
Confidence 3467899999999999 99998421 12679998876543 1222211
Q ss_pred ---------------ccccceeEEeeccCCeeEE-ecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEE
Q psy17325 236 ---------------KIYWPNGLTLDIATRRVYF-ADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKA 299 (461)
Q Consensus 236 ---------------~~~~P~glavD~~~~~ly~-~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~ 299 (461)
.+..|.+|+||. .+.||+ +|.......... ..+ ...+++.
T Consensus 459 ~~~~~~g~~~~~~~~~fnsPDnL~fd~-~G~LWf~TD~~~~~~g~~~-------------------~~g----nn~v~~~ 514 (592)
T 4a9v_A 459 AGTPKGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFA-------------------GMG----NNQMLCA 514 (592)
T ss_dssp TTSGGGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGT-------------------TCC----SCEEEEE
T ss_pred ccccccCccCccccCccCCCCceEECC-CCCEEEEeCCCcCcccccc-------------------ccC----CceEEEE
Confidence 267899999996 689999 886431100000 000 0246777
Q ss_pred eCCCCceEEEEeCC--e-eeeEEEeccCCeEEEeecC
Q psy17325 300 NMDGSNASILVSGQ--L-YEALALDLENGMLYYSTLK 333 (461)
Q Consensus 300 ~~~g~~~~~l~~~~--~-p~~iavd~~~~~lY~t~~~ 333 (461)
..+....+.++... . |.|+++.|.++.||++...
T Consensus 515 dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQH 551 (592)
T 4a9v_A 515 DPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp CTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEES
T ss_pred eCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEeC
Confidence 77544444444432 2 9999999999999998654
No 275
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.66 E-value=0.4 Score=50.82 Aligned_cols=206 Identities=11% Similarity=0.077 Sum_probs=110.6
Q ss_pred eeeeeeeecCCeEEEEeCC--C--CeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCC-----------
Q psy17325 151 VEGLAYDWIGGHIYWLDSR--L--NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE----------- 215 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~--~--~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~----------- 215 (461)
..++++.+.++.|.++-.. . ..|.+.++++........... ...+++..|. . .||++....
T Consensus 165 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~-~~~~~~wspD-~--~l~~~~~~~~~~~~~~~~~~ 240 (741)
T 1yr2_A 165 LDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWV-KFSGLAWLGN-D--ALLYSRFAEPKEGQAFQALN 240 (741)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEE-ESCCCEESTT-S--EEEEEECCCC--------CC
T ss_pred EEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCc-eeccEEEECC-C--EEEEEEecCcccccccccCC
Confidence 4456777777776555432 2 358999988765433321111 1246788877 6 777775222
Q ss_pred -CCcEEEEecCCCCc-EEEEecccc---cceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCC
Q psy17325 216 -NPRIERIGMDGSNR-STIISTKIY---WPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN 290 (461)
Q Consensus 216 -~~~I~~~~~dG~~~-~~i~~~~~~---~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~ 290 (461)
..+|++.++.+... ..++...-. .-.++++.+.++.|+++-..... ..
T Consensus 241 ~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~--------------------------~~- 293 (741)
T 1yr2_A 241 YNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTD--------------------------PV- 293 (741)
T ss_dssp CCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTC--------------------------SC-
T ss_pred CCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCC--------------------------Cc-
Confidence 23588888754332 223322221 24577788777777765432100 00
Q ss_pred CcceeeeEEeCCCC--c-eEEEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCC--CeEEEee
Q psy17325 291 GVPLKIGKANMDGS--N-ASILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGS--NRSTIIS 364 (461)
Q Consensus 291 ~~~~~I~~~~~~g~--~-~~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~--~~~~l~~ 364 (461)
..|+..++++. . .+.+..... .... +.+.++.||+.... -+.+.+|+++++++. ..+.++.
T Consensus 294 ---~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~---------~~~~~~l~~~d~~~~~~~~~~l~~ 360 (741)
T 1yr2_A 294 ---NTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGD---------GAPLKKIVRVDLSGSTPRFDTVVP 360 (741)
T ss_dssp ---CEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECT---------TCTTCEEEEEECSSSSCEEEEEEC
T ss_pred ---ceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECC---------CCCCCEEEEEeCCCCccccEEEec
Confidence 24666666654 3 334433221 1111 34667777665322 123567999988773 4455553
Q ss_pred CCCCCceeEEEecCCCeEEEEcC--CCCeEEEEEecCCCCeE
Q psy17325 365 TKIYWPNGLTLDIATRRVYFADS--KLDFIDFCNYDGTGRQQ 404 (461)
Q Consensus 365 ~~l~~p~glaiD~~~~~ly~~d~--~~~~I~~~~~~g~g~~~ 404 (461)
..-....++++ .+++|+++-. +..+|+.+++ +|...
T Consensus 361 ~~~~~l~~~~~--~~~~lv~~~~~dg~~~l~~~~~--~g~~~ 398 (741)
T 1yr2_A 361 ESKDNLESVGI--AGNRLFASYIHDAKSQVLAFDL--DGKPA 398 (741)
T ss_dssp CCSSEEEEEEE--EBTEEEEEEEETTEEEEEEEET--TSCEE
T ss_pred CCCCeEEEEEE--ECCEEEEEEEECCEEEEEEEeC--CCCce
Confidence 32222345666 4778887743 3446777777 55543
No 276
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=96.65 E-value=0.00052 Score=63.10 Aligned_cols=45 Identities=20% Similarity=0.508 Sum_probs=33.8
Q ss_pred ecCccee-cCCcccC--ceeeccCCccccCCCCeeeeCCCCceeeccccc
Q psy17325 69 QDMNECE-QPGYCSQ--MCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA 115 (461)
Q Consensus 69 ~d~~eC~-~~~~C~~--~C~~~~g~~~C~C~~g~~l~~~~~~C~~~~~~~ 115 (461)
+|++||. ....|+. .|.|+.|+|.|.|.+||. .++..|.+++++.
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~--GnG~~C~d~d~Pq 50 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYT--GNGRQCVAEGSPQ 50 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEE--ECSSSEEETTCEE
T ss_pred ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCC--CCCCcCCCCCCCc
Confidence 4789997 3457864 799999999999999997 4678999987643
No 277
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.63 E-value=0.71 Score=48.49 Aligned_cols=207 Identities=8% Similarity=0.074 Sum_probs=113.8
Q ss_pred eeeeecCCeEEEEeCC------------CCeEEEEeCCCCc--EEEEecCCC---CCceeEEEcCCCCceEEEEeecCC-
Q psy17325 154 LAYDWIGGHIYWLDSR------------LNRIEVCDENGTN--RIVLAKDNI---TQPRGMMLDPSPGTRWLFWTDWGE- 215 (461)
Q Consensus 154 iavd~~~~~ly~~d~~------------~~~I~~~~~~G~~--~~~l~~~~~---~~p~~ia~d~~~g~~~ly~td~~~- 215 (461)
+++. .++.||++... ..+|.+.++.... ...+..... ..-.++++.|... +|+++....
T Consensus 180 ~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~--~l~~~~~~~~ 256 (693)
T 3iuj_A 180 ISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDR--FLLISAANST 256 (693)
T ss_dssp CEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSC--EEEEEEESSS
T ss_pred EEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCC--EEEEEEccCC
Confidence 3444 46677777543 2458887775443 233333221 1134677888755 887765322
Q ss_pred C-CcEEEEecCCC--CcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCc
Q psy17325 216 N-PRIERIGMDGS--NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGV 292 (461)
Q Consensus 216 ~-~~I~~~~~dG~--~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~ 292 (461)
. ..|+..++++. ..+.+... ...-.. .+++.+++||+.......
T Consensus 257 ~~~~i~~~d~~~~~~~~~~l~~~-~~~~~~-~~~~~g~~l~~~t~~~~~------------------------------- 303 (693)
T 3iuj_A 257 SGNRLYVKDLSQENAPLLTVQGD-LDADVS-LVDNKGSTLYLLTNRDAP------------------------------- 303 (693)
T ss_dssp SCCEEEEEETTSTTCCCEEEECS-SSSCEE-EEEEETTEEEEEECTTCT-------------------------------
T ss_pred CCcEEEEEECCCCCCceEEEeCC-CCceEE-EEeccCCEEEEEECCCCC-------------------------------
Confidence 2 58899888754 33444332 111111 145567777775432210
Q ss_pred ceeeeEEeCCCCce---EEEEeCCeeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCC
Q psy17325 293 PLKIGKANMDGSNA---SILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYW 369 (461)
Q Consensus 293 ~~~I~~~~~~g~~~---~~l~~~~~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~ 369 (461)
..+|.++++++... +.++.... ..+.+.+.++.|+++... ....+|+..+++|...+.+.......
T Consensus 304 ~~~l~~~d~~~~~~~~~~~l~~~~~-~~~~~s~~g~~lv~~~~~----------~g~~~l~~~d~~g~~~~~l~~p~~~~ 372 (693)
T 3iuj_A 304 NRRLVTVDAANPGPAHWRDLIPERQ-QVLTVHSGSGYLFAEYMV----------DATARVEQFDYEGKRVREVALPGLGS 372 (693)
T ss_dssp TCEEEEEETTSCCGGGCEEEECCCS-SCEEEEEETTEEEEEEEE----------TTEEEEEEECTTSCEEEEECCSSSSE
T ss_pred CCEEEEEeCCCCCccccEEEecCCC-CEEEEEEECCEEEEEEEE----------CCeeEEEEEECCCCeeEEeecCCCce
Confidence 03688888876554 45544332 112666678877776443 11347888888887665554233333
Q ss_pred ceeEEEecCCCeEEEEcCC---CCeEEEEEecCCCCeEEEEEc
Q psy17325 370 PNGLTLDIATRRVYFADSK---LDFIDFCNYDGTGRQQVILID 409 (461)
Q Consensus 370 p~glaiD~~~~~ly~~d~~---~~~I~~~~~~g~g~~~~~~~~ 409 (461)
..+++.++.++.|+++-.. -..|+.+++ .+.....+..
T Consensus 373 ~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~--~~g~~~~l~~ 413 (693)
T 3iuj_A 373 VSGFNGKHDDPALYFGFENYAQPPTLYRFEP--KSGAISLYRA 413 (693)
T ss_dssp EEECCCCTTCSCEEEEEECSSSCCEEEEECT--TTCCEEEEEC
T ss_pred EEeeecCCCCCEEEEEecCCCCCCEEEEEEC--CCCeEEEEEe
Confidence 4455666667777776332 268888888 3434444443
No 278
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=96.60 E-value=0.0011 Score=44.90 Aligned_cols=37 Identities=30% Similarity=0.581 Sum_probs=27.0
Q ss_pred CCCcccCCCCCCCCCce-----eCCCCceEeCCCCCeecCCCCcee
Q psy17325 29 DLAECKHKFGLCSNTCH-----PTPLGALCTCPPGEILSNDSVTCQ 69 (461)
Q Consensus 29 ~~~~C~~~~~~C~~~C~-----~~~~~~~C~C~~G~~l~~~~~~C~ 69 (461)
+++||.+++.+-..+|. +..++|.|.|++||. +..|+
T Consensus 7 ~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~----G~~CE 48 (55)
T 3u7u_G 7 KCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFT----GDRCQ 48 (55)
T ss_dssp ECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEE----STTSC
T ss_pred cCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCc----CCCcC
Confidence 45788877755566794 456789999999996 67775
No 279
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.58 E-value=0.47 Score=50.45 Aligned_cols=193 Identities=9% Similarity=0.030 Sum_probs=105.0
Q ss_pred cCCeEEEEeCCCC----eEEEEeC---CCC--cEEEEecC-------CCCCceeEEEc-CCCCceEEEEe-ecCCC--Cc
Q psy17325 159 IGGHIYWLDSRLN----RIEVCDE---NGT--NRIVLAKD-------NITQPRGMMLD-PSPGTRWLFWT-DWGEN--PR 218 (461)
Q Consensus 159 ~~~~ly~~d~~~~----~I~~~~~---~G~--~~~~l~~~-------~~~~p~~ia~d-~~~g~~~ly~t-d~~~~--~~ 218 (461)
.++.+||+-...+ .+.+.+. +|. ..++++.. ......+.++. |... +|.|+ +.... ..
T Consensus 125 ~g~~~yy~~~~~g~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~~~~~~~~~S~PDG~--~lAy~~~~~G~~~~~ 202 (751)
T 2xe4_A 125 YGKYRYYTREVKGKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAFCDVMEVKPAPPEHD--LVAFSVDMSGNEVYT 202 (751)
T ss_dssp ETTEEEEEEECTTCCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSCCEEEEEEECTTTTC--EEEEEEESSSSSCEE
T ss_pred ECCEEEEEEECCCCceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCeEEEeeeEecCCCCC--EEEEEEeCCCCceEE
Confidence 4788888865433 3667766 665 55666542 11134567888 7754 55554 42222 45
Q ss_pred EEEEecCCC-CcEEEEecccc-cceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceee
Q psy17325 219 IERIGMDGS-NRSTIISTKIY-WPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI 296 (461)
Q Consensus 219 I~~~~~dG~-~~~~i~~~~~~-~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I 296 (461)
|+..++++. ... ...+. ...+++..+.++.||++..... +.+..|
T Consensus 203 l~v~dl~~g~~~l---~~~~~~~~~~~~WspDg~~l~y~~~d~~------------------------------~~~~~v 249 (751)
T 2xe4_A 203 IEFKRISDPSQTI---ADKVSGTNGEIVWGPDHTSLFYVTKDET------------------------------LRENKV 249 (751)
T ss_dssp EEEEETTCTTCCC---CCCEEEECSCCEECSSTTEEEEEEECTT------------------------------CCEEEE
T ss_pred EEEEECCCCCEeC---CccccCceeeEEEecCCCEEEEEEECCC------------------------------CCCCEE
Confidence 999999876 421 11110 1235666666666766543210 111368
Q ss_pred eEEeCCCCc--eEEEEeCCe---eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCC--e--EEEeeCCC
Q psy17325 297 GKANMDGSN--ASILVSGQL---YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSN--R--STIISTKI 367 (461)
Q Consensus 297 ~~~~~~g~~--~~~l~~~~~---p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~--~--~~l~~~~l 367 (461)
++.++++.. .+.++.... -.++++.|.++.|+|+... .....|+.+++++.. . +.+. ...
T Consensus 250 ~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~----------~~~~~l~~~d~~~~~~~~~~~~l~-~~~ 318 (751)
T 2xe4_A 250 WRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQS----------PETAEVHLLDLRKGNAHNTLEIVR-PRE 318 (751)
T ss_dssp EEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEEC----------SSCEEEEEEESSSCTTCCCEEESS-CCC
T ss_pred EEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecC----------CCCceEEEEECCCCCCCceeEEee-cCC
Confidence 888887654 234444321 3456677777766665322 235678888877642 2 3333 222
Q ss_pred CCceeEEEe-cCCCeEEEE-c---CCCCeEEEEEec
Q psy17325 368 YWPNGLTLD-IATRRVYFA-D---SKLDFIDFCNYD 398 (461)
Q Consensus 368 ~~p~glaiD-~~~~~ly~~-d---~~~~~I~~~~~~ 398 (461)
..+ -..+| ..+++||+. + ....+|.+++++
T Consensus 319 ~~~-~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~ 353 (751)
T 2xe4_A 319 KGV-RYDVQMHGTSHLVILTNEGGAVNHKLLIAPRG 353 (751)
T ss_dssp TTC-CEEEEEETTTEEEEEECTTTCTTCEEEEEETT
T ss_pred CCc-eEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCC
Confidence 222 12344 357888876 2 245689999983
No 280
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.57 E-value=0.0013 Score=47.35 Aligned_cols=40 Identities=28% Similarity=0.606 Sum_probs=28.9
Q ss_pred ecCcceec-CCccc--CceeeccCCccccC-CCCeeeeCCCCce
Q psy17325 69 QDMNECEQ-PGYCS--QMCTNTKGSYICSC-NEGYVLEYDNHTC 108 (461)
Q Consensus 69 ~d~~eC~~-~~~C~--~~C~~~~g~~~C~C-~~g~~l~~~~~~C 108 (461)
+|++||.. ...|. +.|+|++|+|.|.| ..||....++..+
T Consensus 1 ~DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~~~~~ 44 (71)
T 2kl7_A 1 SDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHGEGP 44 (71)
T ss_dssp CCSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCCSCSSC
T ss_pred CccccccCCCCCCCCCCEeECCCCCeEecccCCcccccccCCcc
Confidence 36889973 34685 48999999999984 5688766555443
No 281
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.55 E-value=0.12 Score=50.88 Aligned_cols=197 Identities=13% Similarity=0.078 Sum_probs=111.6
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEec--CCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCC
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK--DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~--~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~ 227 (461)
.+..|++.+..+++..+-..++.|.+.+++......++. +.-....+|++.|..+ .++++- +....|...++.+.
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~--~~l~s~-s~D~~v~iwd~~~~ 197 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNT--NQFYAS-SMEGTTRLQDFKGN 197 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCT--TEEEEE-CSSSCEEEEETTSC
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCC--CEEEEE-eCCCEEEEeeccCC
Confidence 466788877777777777788999999987554333332 2234578999998655 455554 44567877888775
Q ss_pred CcEEEEecc--cccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCc
Q psy17325 228 NRSTIISTK--IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305 (461)
Q Consensus 228 ~~~~i~~~~--~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~ 305 (461)
....+.... ......+++++.+..|..+.... .|...+++|..
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg-----------------------------------~i~~wd~~~~~ 242 (435)
T 4e54_B 198 ILRVFASSDTINIWFCSLDVSASSRMVVTGDNVG-----------------------------------NVILLNMDGKE 242 (435)
T ss_dssp EEEEEECCSSCSCCCCCEEEETTTTEEEEECSSS-----------------------------------BEEEEESSSCB
T ss_pred ceeEEeccCCCCccEEEEEECCCCCEEEEEeCCC-----------------------------------cEeeeccCcce
Confidence 544443321 12345688887666555544332 35555666544
Q ss_pred eEEEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecC-CCeEEEe--eCCCCCceeEEEecCCCe
Q psy17325 306 ASILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG-SNRSTII--STKIYWPNGLTLDIATRR 381 (461)
Q Consensus 306 ~~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG-~~~~~l~--~~~l~~p~glaiD~~~~~ 381 (461)
...+..... ...|++.|.+..++.+-.. .+.|...++.. .....+. ...-.....|++++.+..
T Consensus 243 ~~~~~~h~~~v~~v~~~p~~~~~~~s~s~------------d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~ 310 (435)
T 4e54_B 243 LWNLRMHKKKVTHVALNPCCDWFLATASV------------DQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGAR 310 (435)
T ss_dssp CCCSBCCSSCEEEEEECTTCSSEEEEEET------------TSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSE
T ss_pred eEEEecccceEEeeeecCCCceEEEEecC------------cceeeEEecccccccceEEEeeeccccccceeECCCCCe
Confidence 332221111 7788998887766665443 23333333321 1111111 112233456777765555
Q ss_pred EEEEcCCCCeEEEEEe
Q psy17325 382 VYFADSKLDFIDFCNY 397 (461)
Q Consensus 382 ly~~d~~~~~I~~~~~ 397 (461)
|..+ ...+.|...++
T Consensus 311 l~s~-~~D~~i~iwd~ 325 (435)
T 4e54_B 311 LLTT-DQKSEIRVYSA 325 (435)
T ss_dssp EEEE-ESSSCEEEEES
T ss_pred eEEE-cCCCEEEEEEC
Confidence 5544 44567777776
No 282
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.51 E-value=0.55 Score=43.95 Aligned_cols=187 Identities=7% Similarity=-0.016 Sum_probs=104.0
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecC---CCCcEEEEecCC
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG---ENPRIERIGMDG 226 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~---~~~~I~~~~~dG 226 (461)
.+..+++.+.+ +.+++-..++.|.+.++........+. .-..+..+++.|... .|+.+... ....|...++..
T Consensus 76 ~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~--~l~~~~~~~~~~~g~i~~~d~~~ 151 (369)
T 3zwl_B 76 TIWSIDVDCFT-KYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGN--YFLAILDNVMKNPGSINIYEIER 151 (369)
T ss_dssp CEEEEEECTTS-SEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSS--EEEEEECCBTTBCCEEEEEEEEE
T ss_pred cEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCC--EEEEecCCccCCCCEEEEEEecC
Confidence 45667776644 444555567899999987555444443 235688999999866 66665521 014566555543
Q ss_pred CCc------------EEEEe-cccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcc
Q psy17325 227 SNR------------STIIS-TKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVP 293 (461)
Q Consensus 227 ~~~------------~~i~~-~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~ 293 (461)
... ..+.. ........+++++.+..|+.+....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg---------------------------------- 197 (369)
T 3zwl_B 152 DSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDG---------------------------------- 197 (369)
T ss_dssp CTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTS----------------------------------
T ss_pred CccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCC----------------------------------
Confidence 221 11110 1112567788888776666655432
Q ss_pred eeeeEEeCCC-CceEEEEeC-Ce-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCc
Q psy17325 294 LKIGKANMDG-SNASILVSG-QL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 370 (461)
Q Consensus 294 ~~I~~~~~~g-~~~~~l~~~-~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p 370 (461)
.|...++.. ......+.. .. ...+++.|.+..|+.+.. .+.|...++......... ..-...
T Consensus 198 -~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------------d~~i~v~d~~~~~~~~~~-~~~~~~ 262 (369)
T 3zwl_B 198 -KISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSR-------------DTNSFLVDVSTLQVLKKY-ETDCPL 262 (369)
T ss_dssp -EEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEET-------------TSEEEEEETTTCCEEEEE-ECSSCE
T ss_pred -EEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecC-------------CceEEEEECCCCceeeee-cCCCCc
Confidence 355555554 222222222 22 788999987666655433 344555555433333323 233456
Q ss_pred eeEEEecCCCeEEEEcCCC
Q psy17325 371 NGLTLDIATRRVYFADSKL 389 (461)
Q Consensus 371 ~glaiD~~~~~ly~~d~~~ 389 (461)
..+++.+.+..|+.+....
T Consensus 263 ~~~~~~~~~~~l~~~~~~~ 281 (369)
T 3zwl_B 263 NTAVITPLKEFIILGGGQE 281 (369)
T ss_dssp EEEEECSSSSEEEEEECCC
T ss_pred eeEEecCCCceEEEeecCC
Confidence 7788887777777765443
No 283
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.49 E-value=0.79 Score=48.81 Aligned_cols=186 Identities=9% Similarity=0.043 Sum_probs=103.1
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEec--CCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCC
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK--DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~--~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~ 228 (461)
+.+++.|. .++||+.- ..+.|.+.+......+.+.. ........|+.|+. | .|+++. . ..|.+.+.....
T Consensus 409 v~~i~~d~-~g~lWigt-~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~-g--~lwigt-~--~Gl~~~~~~~~~ 480 (781)
T 3v9f_A 409 VLCSLKDS-EGNLWFGT-YLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKN-K--KIWIGT-H--AGVFVIDLASKK 480 (781)
T ss_dssp EEEEEECT-TSCEEEEE-TTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTT-S--EEEEEE-T--TEEEEEESSSSS
T ss_pred eEEEEECC-CCCEEEEe-ccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCC-C--CEEEEE-C--CceEEEeCCCCe
Confidence 44566663 45665543 34568888776444333321 12245778888874 5 677765 2 578888877544
Q ss_pred cEEEEecc-----cccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCC
Q psy17325 229 RSTIISTK-----IYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303 (461)
Q Consensus 229 ~~~i~~~~-----~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g 303 (461)
.+.+.... ...+..|+.|. .++|+++....+ +.+.+.++
T Consensus 481 ~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWigt~~~G-----------------------------------l~~~~~~~ 524 (781)
T 3v9f_A 481 VIHHYDTSNSQLLENFVRSIAQDS-EGRFWIGTFGGG-----------------------------------VGIYTPDM 524 (781)
T ss_dssp CCEEECTTTSSCSCSCEEEEEECT-TCCEEEEESSSC-----------------------------------EEEECTTC
T ss_pred EEecccCcccccccceeEEEEEcC-CCCEEEEEcCCC-----------------------------------EEEEeCCC
Confidence 44333221 23567888885 677777654321 45555544
Q ss_pred CceEEEEe-CCe----eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEee-CCC--CCceeEEE
Q psy17325 304 SNASILVS-GQL----YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS-TKI--YWPNGLTL 375 (461)
Q Consensus 304 ~~~~~l~~-~~~----p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~-~~l--~~p~glai 375 (461)
...+.+.. ..+ ...|..|+ .|.||++... +++ .+.+......+.+-. ..+ ....+|+.
T Consensus 525 ~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWi~T~~--Glv-----------~~~d~~~~~~~~~~~~~gl~~~~i~~i~~ 590 (781)
T 3v9f_A 525 QLVRKFNQYEGFCSNTINQIYRSS-KGQMWLATGE--GLV-----------CFPSARNFDYQVFQRKEGLPNTHIRAISE 590 (781)
T ss_dssp CEEEEECTTTTCSCSCEEEEEECT-TSCEEEEETT--EEE-----------EESCTTTCCCEEECGGGTCSCCCCCEEEE
T ss_pred CeEEEccCCCCCCCCeeEEEEECC-CCCEEEEECC--Cce-----------EEECCCCCcEEEccccCCCCCceEEEEEE
Confidence 43333321 122 56788884 6777776543 221 444433322222211 122 23568999
Q ss_pred ecCCCeEEEEcCCCCeEEEEEe
Q psy17325 376 DIATRRVYFADSKLDFIDFCNY 397 (461)
Q Consensus 376 D~~~~~ly~~d~~~~~I~~~~~ 397 (461)
| .+++||++-. +-|.+++.
T Consensus 591 d-~~g~lW~~t~--~Gl~~~~~ 609 (781)
T 3v9f_A 591 D-KNGNIWASTN--TGISCYIT 609 (781)
T ss_dssp C-SSSCEEEECS--SCEEEEET
T ss_pred C-CCCCEEEEcC--CceEEEEC
Confidence 8 6789988853 44888888
No 284
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.46 E-value=0.65 Score=44.27 Aligned_cols=99 Identities=6% Similarity=-0.173 Sum_probs=57.9
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCCc-------EEEEecCCCCCceeEEEcCC----C---CceEEEEeecCCC
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN-------RIVLAKDNITQPRGMMLDPS----P---GTRWLFWTDWGEN 216 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~-------~~~l~~~~~~~p~~ia~d~~----~---g~~~ly~td~~~~ 216 (461)
+..+++++ +++++-..++.|.+.+++... ...+. ..-.....+++.|. . . +|+.+. ..
T Consensus 19 i~~~~~~~---~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~g~~~~--~l~s~~--~d 90 (397)
T 1sq9_A 19 IFSVSACN---SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHF-VHKSGLHHVDVLQAIERDAFELC--LVATTS--FS 90 (397)
T ss_dssp EEEEEECS---SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEE-CCTTCEEEEEEEEEEETTTEEEE--EEEEEE--TT
T ss_pred eEEEEecC---CeEEEEcCCCEEEEEECCCcccccCCCcceEEe-cCCCcEEEEEEecccccCCcccc--EEEEEc--CC
Confidence 44555543 566666778899999987655 33333 33345688899886 5 5 666655 33
Q ss_pred CcEEEEecCCCCc-----EEEEecc-----cccceeEEee----ccCCe-eEEecC
Q psy17325 217 PRIERIGMDGSNR-----STIISTK-----IYWPNGLTLD----IATRR-VYFADS 257 (461)
Q Consensus 217 ~~I~~~~~dG~~~-----~~i~~~~-----~~~P~glavD----~~~~~-ly~~d~ 257 (461)
..|...++..... ...+... -.....+++. +.+.. |+.+..
T Consensus 91 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~ 146 (397)
T 1sq9_A 91 GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDV 146 (397)
T ss_dssp SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEET
T ss_pred CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeC
Confidence 5676666664442 2222222 2567788888 76776 555544
No 285
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.45 E-value=1.1 Score=46.82 Aligned_cols=197 Identities=8% Similarity=0.015 Sum_probs=110.9
Q ss_pred cceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCc-----EEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEe
Q psy17325 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN-----RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIG 223 (461)
Q Consensus 149 ~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~-----~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~ 223 (461)
..+..+++.+.+.++.++-+.++.|.+.+++... ....+...-.....+++.|... +|.-.. ....|...+
T Consensus 383 ~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~--~l~sgs--~Dg~v~vwd 458 (694)
T 3dm0_A 383 DMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQ--FALSGS--WDGELRLWD 458 (694)
T ss_dssp SCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSS--EEEEEE--TTSEEEEEE
T ss_pred ceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCC--EEEEEe--CCCcEEEEE
Confidence 3456677776667888888889999999876421 1222333334577899998755 665544 345777777
Q ss_pred cCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCC
Q psy17325 224 MDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303 (461)
Q Consensus 224 ~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g 303 (461)
+........+.........+++.+.+..|.-+.... .|..-+..+
T Consensus 459 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~-----------------------------------~i~iwd~~~ 503 (694)
T 3dm0_A 459 LAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDR-----------------------------------TIKLWNTLG 503 (694)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTS-----------------------------------CEEEECTTS
T ss_pred CCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCC-----------------------------------EEEEEECCC
Confidence 764333223333344567888887666665443332 244444444
Q ss_pred CceEEEEeCC--e---eeeEEEeccCC-eEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEec
Q psy17325 304 SNASILVSGQ--L---YEALALDLENG-MLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDI 377 (461)
Q Consensus 304 ~~~~~l~~~~--~---p~~iavd~~~~-~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~ 377 (461)
.....+.... . ...+++.|... .+.++-.. .+.|...++........+...-.....|++.+
T Consensus 504 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~------------d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp 571 (694)
T 3dm0_A 504 ECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASW------------DKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSP 571 (694)
T ss_dssp CEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEET------------TSCEEEEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred CcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeC------------CCeEEEEECCCCcEEEEEcCCCCCEEEEEEeC
Confidence 3333332211 1 56677776542 23333332 34455555544333333324445677889985
Q ss_pred CCCeEEEEcCCCCeEEEEEe
Q psy17325 378 ATRRVYFADSKLDFIDFCNY 397 (461)
Q Consensus 378 ~~~~ly~~d~~~~~I~~~~~ 397 (461)
.+ ++..+-...+.|...++
T Consensus 572 dg-~~l~sg~~Dg~i~iwd~ 590 (694)
T 3dm0_A 572 DG-SLCASGGKDGVVLLWDL 590 (694)
T ss_dssp TS-SEEEEEETTSBCEEEET
T ss_pred CC-CEEEEEeCCCeEEEEEC
Confidence 54 44445455677888887
No 286
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.40 E-value=0.96 Score=46.59 Aligned_cols=203 Identities=9% Similarity=-0.002 Sum_probs=107.2
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCC-CCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecC-CC
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDEN-GTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD-GS 227 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~-G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~d-G~ 227 (461)
.|..+++++.++.|.... .+.|.+.++. +....++ .+.-.....+++.|... +|--.+ ....|..-++. +.
T Consensus 20 ~~~~~~~spdg~~l~~~~--~~~v~l~~~~~~~~~~~~-~~h~~~v~~~~~spdg~--~lasg~--~d~~v~lWd~~~~~ 92 (611)
T 1nr0_A 20 TAVVLGNTPAGDKIQYCN--GTSVYTVPVGSLTDTEIY-TEHSHQTTVAKTSPSGY--YCASGD--VHGNVRIWDTTQTT 92 (611)
T ss_dssp CCCCCEECTTSSEEEEEE--TTEEEEEETTCSSCCEEE-CCCSSCEEEEEECTTSS--EEEEEE--TTSEEEEEESSSTT
T ss_pred ceeEEeeCCCCCEEEeCC--CCEEEEecCCCcccCeEe-cCCCCceEEEEECCCCc--EEEEEe--CCCCEEEeECCCCc
Confidence 466677887777776655 3588888875 4444443 33335578899999755 555444 34566666664 33
Q ss_pred CcE-EEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCce
Q psy17325 228 NRS-TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306 (461)
Q Consensus 228 ~~~-~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~ 306 (461)
... ..+...-.....+++++.++.|..+....+.. ..|...+ .|+..
T Consensus 93 ~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~-------------------------------~~v~~wd-~~~~~ 140 (611)
T 1nr0_A 93 HILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERF-------------------------------GHVFLFD-TGTSN 140 (611)
T ss_dssp CCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCS-------------------------------EEEEETT-TCCBC
T ss_pred ceeeEeecccCCceEEEEECCCCCEEEEEECCCCce-------------------------------eEEEEee-CCCCc
Confidence 221 12222234567899999888777655433210 1122222 12211
Q ss_pred EEEEeCC-eeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEE
Q psy17325 307 SILVSGQ-LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFA 385 (461)
Q Consensus 307 ~~l~~~~-~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~ 385 (461)
..+.... ....+++.|.+..+..+-.. .+.|.-.+.........+...-.....+++.++ ++++.+
T Consensus 141 ~~l~gh~~~v~~v~f~p~~~~~l~s~s~------------D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspd-g~~las 207 (611)
T 1nr0_A 141 GNLTGQARAMNSVDFKPSRPFRIISGSD------------DNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPD-GSLFAS 207 (611)
T ss_dssp BCCCCCSSCEEEEEECSSSSCEEEEEET------------TSCEEEEETTTBEEEEEECCCSSCEEEEEECTT-SSEEEE
T ss_pred ceecCCCCCceEEEECCCCCeEEEEEeC------------CCeEEEEECCCCeEeeeeccccCceEEEEECCC-CCEEEE
Confidence 1111111 17788888876654555443 222322222111111112234456778899865 445555
Q ss_pred cCCCCeEEEEEecCCCCeEE
Q psy17325 386 DSKLDFIDFCNYDGTGRQQV 405 (461)
Q Consensus 386 d~~~~~I~~~~~~g~g~~~~ 405 (461)
-...+.|...++. +|....
T Consensus 208 ~s~D~~i~lwd~~-~g~~~~ 226 (611)
T 1nr0_A 208 TGGDGTIVLYNGV-DGTKTG 226 (611)
T ss_dssp EETTSCEEEEETT-TCCEEE
T ss_pred EECCCcEEEEECC-CCcEee
Confidence 4556778887762 455433
No 287
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=96.36 E-value=0.0019 Score=54.71 Aligned_cols=42 Identities=33% Similarity=0.667 Sum_probs=35.1
Q ss_pred CCCcccCC-CCCCCCCceeCCCCceEeCCCCCeecCCCCceec
Q psy17325 29 DLAECKHK-FGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQD 70 (461)
Q Consensus 29 ~~~~C~~~-~~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~d 70 (461)
+.++|... ...|.+.|.+.++++.|.|++||.+..++++|++
T Consensus 116 d~~eC~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~~~~~C~~ 158 (159)
T 1nzi_A 116 DINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGV 158 (159)
T ss_dssp ECCTTTC-CCCCSSSEEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred cCcccCCCCCCCCCCcccCcCCCEEEecCCCcEECCCCCcccc
Confidence 46788753 3578899999999999999999999888888974
No 288
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.34 E-value=1.1 Score=45.50 Aligned_cols=201 Identities=8% Similarity=-0.102 Sum_probs=102.2
Q ss_pred eeeeeeee--cCCeEEEEeCCCCeEEEEeCC-C------C-cEEEEecCCCCCceeEEEcCCCCceEEEEeecCCC--Cc
Q psy17325 151 VEGLAYDW--IGGHIYWLDSRLNRIEVCDEN-G------T-NRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGEN--PR 218 (461)
Q Consensus 151 p~~iavd~--~~~~ly~~d~~~~~I~~~~~~-G------~-~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~--~~ 218 (461)
+..+++.+ .+..|+ +-..++.|.+.++. | . .....+.........+++.|... +|+.+..... ..
T Consensus 67 v~~~~~sp~~~~~~l~-s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~~~~~~~~~~ 143 (615)
T 1pgu_A 67 VTTVKFSPIKGSQYLC-SGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGR--RLCVVGEGRDNFGV 143 (615)
T ss_dssp EEEEEECSSTTCCEEE-EEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSS--EEEEEECCSSCSEE
T ss_pred EEEEEECcCCCCCEEE-EecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCC--EEEEeccCCCCccE
Confidence 57788887 444444 44457889998884 3 1 11222222335678999999866 7776652211 34
Q ss_pred EEEEecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeE
Q psy17325 219 IERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGK 298 (461)
Q Consensus 219 I~~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~ 298 (461)
|...+ .+. ....+.........+++.+.+..++++-...+. |..
T Consensus 144 v~~~d-~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~----------------------------------v~v 187 (615)
T 1pgu_A 144 FISWD-SGN-SLGEVSGHSQRINACHLKQSRPMRSMTVGDDGS----------------------------------VVF 187 (615)
T ss_dssp EEETT-TCC-EEEECCSCSSCEEEEEECSSSSCEEEEEETTTE----------------------------------EEE
T ss_pred EEEEE-CCC-cceeeecCCccEEEEEECCCCCcEEEEEeCCCc----------------------------------EEE
Confidence 44444 222 222222333456788888766634444333322 333
Q ss_pred EeCCCCceEEEEe--CC---eeeeEEEecc-CCeEEEeecCceeeEEEeecCCCCceEEEeecCCC-eEEEee---CCCC
Q psy17325 299 ANMDGSNASILVS--GQ---LYEALALDLE-NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSN-RSTIIS---TKIY 368 (461)
Q Consensus 299 ~~~~g~~~~~l~~--~~---~p~~iavd~~-~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~-~~~l~~---~~l~ 368 (461)
.++........+. .. ....+++.|. +..|+.... .+.|...++.... ...+.. ..-.
T Consensus 188 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-------------dg~i~vwd~~~~~~~~~~~~~~~~~~~ 254 (615)
T 1pgu_A 188 YQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS-------------DRKISCFDGKSGEFLKYIEDDQEPVQG 254 (615)
T ss_dssp EETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEET-------------TCCEEEEETTTCCEEEECCBTTBCCCS
T ss_pred EeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeC-------------CCeEEEEECCCCCEeEEecccccccCC
Confidence 3332222111111 11 2567888887 554444332 3445555543222 222212 2334
Q ss_pred CceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEE
Q psy17325 369 WPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVI 406 (461)
Q Consensus 369 ~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~ 406 (461)
....|++. +++++++-...+.|...++. ++.....
T Consensus 255 ~v~~~~~~--~~~~l~~~~~d~~i~~wd~~-~~~~~~~ 289 (615)
T 1pgu_A 255 GIFALSWL--DSQKFATVGADATIRVWDVT-TSKCVQK 289 (615)
T ss_dssp CEEEEEES--SSSEEEEEETTSEEEEEETT-TTEEEEE
T ss_pred ceEEEEEc--CCCEEEEEcCCCcEEEEECC-CCcEEEE
Confidence 56778886 44444444556788888883 4544333
No 289
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.33 E-value=0.2 Score=47.62 Aligned_cols=194 Identities=8% Similarity=0.021 Sum_probs=97.8
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCCc--EEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCC
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN--RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~--~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~ 228 (461)
+..+++.+. +++.++-..++.|.+.++++.. ....+...-.....+++.|... +|+.+. ....|...++....
T Consensus 14 v~~~~~s~~-g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~--~l~s~s--~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 14 SYEHAFNSQ-RTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSN--RIVTCS--QDRNAYVYEKRPDG 88 (377)
T ss_dssp CSCCEECSS-SSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTC--CEEEEE--TTSSEEEC------
T ss_pred EEEEEECCC-CCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCC--EEEEEe--CCCeEEEEEcCCCC
Confidence 455666653 3444444556778888877552 2222223334578899998855 666554 33567766666433
Q ss_pred ---cEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCc
Q psy17325 229 ---RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305 (461)
Q Consensus 229 ---~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~ 305 (461)
....+.........+++.+.+..|+.+.... .|...+++...
T Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----------------------------------~i~iwd~~~~~ 133 (377)
T 3dwl_C 89 TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGAR-----------------------------------VISVCYFEQEN 133 (377)
T ss_dssp CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSS-----------------------------------CEEECCC----
T ss_pred ceeeeeEecccCCceEEEEECCCCCEEEEEecCC-----------------------------------eEEEEEECCcc
Confidence 2222222334567788887666666554432 24444444332
Q ss_pred ----eEEEEe-CCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecC-------------CC--eEEEee
Q psy17325 306 ----ASILVS-GQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG-------------SN--RSTIIS 364 (461)
Q Consensus 306 ----~~~l~~-~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG-------------~~--~~~l~~ 364 (461)
...+.. ... ...+++.|.+..|...... +.|...++.. .. ...++.
T Consensus 134 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (377)
T 3dwl_C 134 DWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD-------------RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCA 200 (377)
T ss_dssp -CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS-------------SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEE
T ss_pred cceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC-------------CEEEEEEEEecccCCCccccccccccchhhhhh
Confidence 233322 112 7889999866655544332 2333333310 00 011111
Q ss_pred --CCCCCceeEEEecCCCeEEEEcCCCCeEEEEEec
Q psy17325 365 --TKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398 (461)
Q Consensus 365 --~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~ 398 (461)
..-.....+++.+.+..|+.+. ..+.|...++.
T Consensus 201 ~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~iwd~~ 235 (377)
T 3dwl_C 201 EYPSGGWVHAVGFSPSGNALAYAG-HDSSVTIAYPS 235 (377)
T ss_dssp CCCCSSSEEEEEECTTSSCEEEEE-TTTEEC-CEEC
T ss_pred cccCCceEEEEEECCCCCEEEEEe-CCCcEEEEECC
Confidence 2333467889987666666653 45678888873
No 290
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.33 E-value=0.7 Score=43.21 Aligned_cols=184 Identities=8% Similarity=-0.017 Sum_probs=102.6
Q ss_pred CeEEEEeCCCCeEEEEeCCCCcEEE--EecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEecccc
Q psy17325 161 GHIYWLDSRLNRIEVCDENGTNRIV--LAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY 238 (461)
Q Consensus 161 ~~ly~~d~~~~~I~~~~~~G~~~~~--l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~~~~ 238 (461)
+.+.++-+.++.|.+.+.+...... .+.+.......+++.+... .+.-+. ....|...++........+.....
T Consensus 48 ~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~--~l~s~s--~D~~i~lWd~~~~~~~~~~~~~~~ 123 (321)
T 3ow8_A 48 SETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLP--IAASSS--LDAHIRLWDLENGKQIKSIDAGPV 123 (321)
T ss_dssp -CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSS--EEEEEE--TTSEEEEEETTTTEEEEEEECCTT
T ss_pred CCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCC--EEEEEe--CCCcEEEEECCCCCEEEEEeCCCc
Confidence 4566777778888888876544322 2333334567788887755 444333 446777777764333333333334
Q ss_pred cceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCe--ee
Q psy17325 239 WPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL--YE 316 (461)
Q Consensus 239 ~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~--p~ 316 (461)
....+++.+.++.|..+.... .|...++........+.... ..
T Consensus 124 ~~~~~~~spdg~~l~~g~~dg-----------------------------------~v~i~~~~~~~~~~~~~~~~~~v~ 168 (321)
T 3ow8_A 124 DAWTLAFSPDSQYLATGTHVG-----------------------------------KVNIFGVESGKKEYSLDTRGKFIL 168 (321)
T ss_dssp CCCCEEECTTSSEEEEECTTS-----------------------------------EEEEEETTTCSEEEEEECSSSCEE
T ss_pred cEEEEEECCCCCEEEEEcCCC-----------------------------------cEEEEEcCCCceeEEecCCCceEE
Confidence 566788888766665544332 34455554443333333222 77
Q ss_pred eEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEE
Q psy17325 317 ALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCN 396 (461)
Q Consensus 317 ~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~ 396 (461)
.+++.|.+..|..... .+.|...++........+...-.....|++.+.+..|..+ ...+.|...+
T Consensus 169 ~~~~spdg~~lasg~~-------------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~-s~dg~i~iwd 234 (321)
T 3ow8_A 169 SIAYSPDGKYLASGAI-------------DGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTA-SDDGYIKIYD 234 (321)
T ss_dssp EEEECTTSSEEEEEET-------------TSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEE-CTTSCEEEEE
T ss_pred EEEECCCCCEEEEEcC-------------CCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEE-cCCCeEEEEE
Confidence 8899987766654433 3445555543322222222333456789998655555444 5567788888
Q ss_pred e
Q psy17325 397 Y 397 (461)
Q Consensus 397 ~ 397 (461)
+
T Consensus 235 ~ 235 (321)
T 3ow8_A 235 V 235 (321)
T ss_dssp T
T ss_pred C
Confidence 8
No 291
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.32 E-value=0.67 Score=42.95 Aligned_cols=102 Identities=6% Similarity=-0.055 Sum_probs=60.3
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCc-----EEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEec
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN-----RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGM 224 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~-----~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~ 224 (461)
.+..|++.+..+++.++-+.++.|.+.++.... ....+.+.......+++.|... +|+... ....|...+.
T Consensus 40 ~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~--~l~s~~--~d~~i~~~~~ 115 (340)
T 4aow_A 40 WVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQ--FALSGS--WDGTLRLWDL 115 (340)
T ss_dssp CEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSS--EEEEEE--TTSEEEEEET
T ss_pred CEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCC--EEEEEc--ccccceEEee
Confidence 466788877777888888888999998865432 1122233334578899998755 666554 3356666666
Q ss_pred CCCCcEEEEecccccceeEEeeccCCeeEEe
Q psy17325 225 DGSNRSTIISTKIYWPNGLTLDIATRRVYFA 255 (461)
Q Consensus 225 dG~~~~~i~~~~~~~P~glavD~~~~~ly~~ 255 (461)
..................+.+.+.+..|+.+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~ 146 (340)
T 4aow_A 116 TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSG 146 (340)
T ss_dssp TTTEEEEEEECCSSCEEEEEECTTSSCEEEE
T ss_pred cccceeeeecCCCCceeEEEEeecCccceee
Confidence 5544333333333344555555545544443
No 292
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.22 E-value=0.82 Score=42.96 Aligned_cols=197 Identities=8% Similarity=0.045 Sum_probs=103.4
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEE--EecCCCCCceeEEEcCC--CCceEEEEeecCCCCcEEEEecC
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV--LAKDNITQPRGMMLDPS--PGTRWLFWTDWGENPRIERIGMD 225 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~--l~~~~~~~p~~ia~d~~--~g~~~ly~td~~~~~~I~~~~~d 225 (461)
.+..+++.+.+..|. +-..++.|.+.++++..... .+...-.....|++.+. .. +|+.+. ....|...++.
T Consensus 13 ~v~~~~~s~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~--~l~s~~--~dg~v~iwd~~ 87 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLA-TCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGT--ILASCS--YDGKVLIWKEE 87 (379)
T ss_dssp CEEEEEECSSSSEEE-EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCS--EEEEEE--TTSCEEEEEEE
T ss_pred cEEEEEEcCCCCEEE-EEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCC--EEEEec--cCCEEEEEEcC
Confidence 355667765444444 44456788888876433222 23333345678888755 34 565554 34567777776
Q ss_pred CCCc--EEEEecccccceeEEeecc--CCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeC
Q psy17325 226 GSNR--STIISTKIYWPNGLTLDIA--TRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANM 301 (461)
Q Consensus 226 G~~~--~~i~~~~~~~P~glavD~~--~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~ 301 (461)
.... .............+++.+. ...|+.+.... .|...++
T Consensus 88 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~-----------------------------------~i~v~d~ 132 (379)
T 3jrp_A 88 NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG-----------------------------------KVSVVEF 132 (379)
T ss_dssp TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS-----------------------------------EEEEEEC
T ss_pred CCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCC-----------------------------------cEEEEec
Confidence 5432 1222223345778888876 45555544332 3444444
Q ss_pred CCC--ceEEEEeCCe--eeeEEEecc------------CCeEEEeecCceeeEEEeecCCCCceEEEeecCCC-eEEE--
Q psy17325 302 DGS--NASILVSGQL--YEALALDLE------------NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSN-RSTI-- 362 (461)
Q Consensus 302 ~g~--~~~~l~~~~~--p~~iavd~~------------~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~-~~~l-- 362 (461)
... .....+.... ...+++.|. ++.++++-.. .+.|...++.... ...+
T Consensus 133 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------------dg~i~i~d~~~~~~~~~~~~ 200 (379)
T 3jrp_A 133 KENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA------------DNLVKIWKYNSDAQTYVLES 200 (379)
T ss_dssp CTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEET------------TSCEEEEEEETTTTEEEEEE
T ss_pred CCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeC------------CCeEEEEEecCCCcceeeEE
Confidence 433 1222222222 677888874 3444443333 3455555554322 2111
Q ss_pred -eeCCCCCceeEEEecCC--CeEEEEcCCCCeEEEEEec
Q psy17325 363 -ISTKIYWPNGLTLDIAT--RRVYFADSKLDFIDFCNYD 398 (461)
Q Consensus 363 -~~~~l~~p~glaiD~~~--~~ly~~d~~~~~I~~~~~~ 398 (461)
+...-.....|++.+.. ++++.+-...+.|...++.
T Consensus 201 ~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~ 239 (379)
T 3jrp_A 201 TLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 239 (379)
T ss_dssp EECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred EEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCC
Confidence 11234457789998763 5555554556778888873
No 293
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.19 E-value=0.77 Score=42.39 Aligned_cols=102 Identities=10% Similarity=0.097 Sum_probs=63.0
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCc
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~ 229 (461)
.+.++++.+.+.. ..+-..++.|.+.++........+...-.....+++.|... +|+... ....|...++.....
T Consensus 15 ~V~~~~fsp~~~~-l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~s~s--~d~~i~vwd~~~~~~ 89 (304)
T 2ynn_A 15 RVKGIDFHPTEPW-VLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKN--WIIVGS--DDFRIRVFNYNTGEK 89 (304)
T ss_dssp CEEEEEECSSSSE-EEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGT--EEEEEE--TTSEEEEEETTTCCE
T ss_pred ceEEEEECCCCCE-EEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCC--EEEEEC--CCCEEEEEECCCCcE
Confidence 4667788765544 44555678999999876544333333334467888888766 666554 346777777764443
Q ss_pred EEEEecccccceeEEeeccCCeeEEec
Q psy17325 230 STIISTKIYWPNGLTLDIATRRVYFAD 256 (461)
Q Consensus 230 ~~i~~~~~~~P~glavD~~~~~ly~~d 256 (461)
...+.........|++.+.+..|+-+.
T Consensus 90 ~~~~~~h~~~v~~~~~~~~~~~l~sgs 116 (304)
T 2ynn_A 90 VVDFEAHPDYIRSIAVHPTKPYVLSGS 116 (304)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEEEEE
T ss_pred EEEEeCCCCcEEEEEEcCCCCEEEEEC
Confidence 333333344577899988666555443
No 294
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.19 E-value=0.76 Score=42.33 Aligned_cols=195 Identities=5% Similarity=-0.013 Sum_probs=105.3
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCc
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~ 229 (461)
.+..+++.+.+ ++.++-..++.|.+.++........+.........+++.|... +|+... ....|...++.....
T Consensus 67 ~v~~~~~~~~~-~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~s~~--~d~~i~iwd~~~~~~ 141 (312)
T 4ery_A 67 GISDVAWSSDS-NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN--LIVSGS--FDESVRIWDVKTGKC 141 (312)
T ss_dssp CEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSS--EEEEEE--TTSCEEEEETTTCCE
T ss_pred ceEEEEEcCCC-CEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCC--EEEEEe--CCCcEEEEECCCCEE
Confidence 35567776644 4455555678999999775554444444435577899999866 666554 345777777764433
Q ss_pred EEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCc-eEE
Q psy17325 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN-ASI 308 (461)
Q Consensus 230 ~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~-~~~ 308 (461)
...+.........+++.+.+..|+.+.... .|...++.... ...
T Consensus 142 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----------------------------------~i~~wd~~~~~~~~~ 186 (312)
T 4ery_A 142 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-----------------------------------LCRIWDTASGQCLKT 186 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTS-----------------------------------CEEEEETTTCCEEEE
T ss_pred EEEecCCCCcEEEEEEcCCCCEEEEEeCCC-----------------------------------cEEEEECCCCceeeE
Confidence 333333233456788887666555544332 34444443322 222
Q ss_pred EEeCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCC--CceeEEEecCCCeEEE
Q psy17325 309 LVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY--WPNGLTLDIATRRVYF 384 (461)
Q Consensus 309 l~~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~--~p~glaiD~~~~~ly~ 384 (461)
+..... ...++++|.+..|..+... +.|...++............-. ......+...++.+++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 253 (312)
T 4ery_A 187 LIDDDNPPVSFVKFSPNGKYILAATLD-------------NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 253 (312)
T ss_dssp ECCSSCCCEEEEEECTTSSEEEEEETT-------------TEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEE
T ss_pred EeccCCCceEEEEECCCCCEEEEEcCC-------------CeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEE
Confidence 222222 5678888877666554332 3344444432221111111111 1122333445566666
Q ss_pred EcCCCCeEEEEEe
Q psy17325 385 ADSKLDFIDFCNY 397 (461)
Q Consensus 385 ~d~~~~~I~~~~~ 397 (461)
+-...+.|...++
T Consensus 254 sg~~dg~i~vwd~ 266 (312)
T 4ery_A 254 SGSEDNLVYIWNL 266 (312)
T ss_dssp ECCTTSCEEEEET
T ss_pred EECCCCEEEEEEC
Confidence 6666778888888
No 295
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.18 E-value=0.73 Score=42.01 Aligned_cols=99 Identities=8% Similarity=-0.033 Sum_probs=55.4
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCC--
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN-- 228 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~-- 228 (461)
+..+++ + .+..+++-..++.|.+.+++.......+.........+++.|... .|+.+. ....|...++....
T Consensus 21 v~~~~~-~-~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~--~dg~i~~~~~~~~~~~ 94 (313)
T 3odt_A 21 VRDVVA-V-DDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKE--LLLFGG--KDTMINGVPLFATSGE 94 (313)
T ss_dssp EEEEEE-E-ETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTT--EEEEEE--TTSCEEEEETTCCTTS
T ss_pred cEEEEe-c-CCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCC--EEEEec--CCCeEEEEEeeecCCC
Confidence 445555 3 344455556678899999876655544444445688999999866 676665 34566655554322
Q ss_pred -cEEEEecccccceeEEeeccCCeeEEecC
Q psy17325 229 -RSTIISTKIYWPNGLTLDIATRRVYFADS 257 (461)
Q Consensus 229 -~~~i~~~~~~~P~glavD~~~~~ly~~d~ 257 (461)
....+.........++++ ++.|+.+..
T Consensus 95 ~~~~~~~~~~~~i~~~~~~--~~~l~~~~~ 122 (313)
T 3odt_A 95 DPLYTLIGHQGNVCSLSFQ--DGVVISGSW 122 (313)
T ss_dssp CC-CEECCCSSCEEEEEEE--TTEEEEEET
T ss_pred CcccchhhcccCEEEEEec--CCEEEEEeC
Confidence 111122222344556664 445544443
No 296
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.17 E-value=0.83 Score=42.54 Aligned_cols=195 Identities=10% Similarity=-0.012 Sum_probs=104.8
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcE-----EEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecC
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-----IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD 225 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~-----~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~d 225 (461)
+..+++.+..+++.++-+.++.|.+.++.+... ...+...-.....+++.|... +|+-+. ....|...++.
T Consensus 20 V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~--~l~s~s--~D~~v~~wd~~ 95 (319)
T 3frx_A 20 VTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGA--YALSAS--WDKTLRLWDVA 95 (319)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSS--EEEEEE--TTSEEEEEETT
T ss_pred EEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCC--EEEEEe--CCCEEEEEECC
Confidence 455666655567777878888888887654221 112223334567889988755 666554 34577777765
Q ss_pred CCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCc
Q psy17325 226 GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305 (461)
Q Consensus 226 G~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~ 305 (461)
.......+.........+++++....|.-+.... .|..-++.+..
T Consensus 96 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~-----------------------------------~i~vwd~~~~~ 140 (319)
T 3frx_A 96 TGETYQRFVGHKSDVMSVDIDKKASMIISGSRDK-----------------------------------TIKVWTIKGQC 140 (319)
T ss_dssp TTEEEEEEECCSSCEEEEEECTTSCEEEEEETTS-----------------------------------CEEEEETTSCE
T ss_pred CCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCC-----------------------------------eEEEEECCCCe
Confidence 4332222333334567788887655555443322 34555555544
Q ss_pred eEEEEeCCe-eeeEEEeccC-----CeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCC
Q psy17325 306 ASILVSGQL-YEALALDLEN-----GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIAT 379 (461)
Q Consensus 306 ~~~l~~~~~-p~~iavd~~~-----~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~ 379 (461)
...+..... ...+++.|.. +.+.++-.. .+.|...++............-.....|++.+.+
T Consensus 141 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~------------d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g 208 (319)
T 3frx_A 141 LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGN------------DKMVKAWNLNQFQIEADFIGHNSNINTLTASPDG 208 (319)
T ss_dssp EEEECCCSSCEEEEEECCC------CCEEEEEET------------TSCEEEEETTTTEEEEEECCCCSCEEEEEECTTS
T ss_pred EEEEeccCCcEEEEEEccCCCCCCCccEEEEEeC------------CCEEEEEECCcchhheeecCCCCcEEEEEEcCCC
Confidence 433332222 5556665532 223333222 3445544544333222222344456788888654
Q ss_pred CeEEEEcCCCCeEEEEEe
Q psy17325 380 RRVYFADSKLDFIDFCNY 397 (461)
Q Consensus 380 ~~ly~~d~~~~~I~~~~~ 397 (461)
..|. +-...+.|...++
T Consensus 209 ~~l~-s~~~dg~i~iwd~ 225 (319)
T 3frx_A 209 TLIA-SAGKDGEIMLWNL 225 (319)
T ss_dssp SEEE-EEETTCEEEEEET
T ss_pred CEEE-EEeCCCeEEEEEC
Confidence 4444 4445678888888
No 297
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=96.16 E-value=0.004 Score=47.27 Aligned_cols=50 Identities=24% Similarity=0.616 Sum_probs=35.6
Q ss_pred CCCCCCCCCCCCC---CCcccCCCCCCCCCceeCC--CCceEeCCCCCeecCCCCcee-cCcc
Q psy17325 17 DCPNGADEGPGCD---LAECKHKFGLCSNTCHPTP--LGALCTCPPGEILSNDSVTCQ-DMNE 73 (461)
Q Consensus 17 dC~dg~de~~~C~---~~~C~~~~~~C~~~C~~~~--~~~~C~C~~G~~l~~~~~~C~-d~~e 73 (461)
.|+.|+. .|+ +++|..++..-...|.+.+ ++|.|.|++||. +..|+ +++|
T Consensus 35 ~C~~G~~---~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce~~ide 90 (91)
T 1tpg_A 35 WCNSGRA---QCHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFA----GKSCEIDTRA 90 (91)
T ss_dssp ECSSSCC---BCCEECEEECSSCCSCTTCEEEEESSSSCEEEECCTTCB----SSSCCBCSSC
T ss_pred ECCCCCc---ccccCcCCcccCCCCCCCCEeecCCCCCCeEeECCCCCc----CCcCCcCCCC
Confidence 4666663 674 6788866533345699887 899999999995 67886 5554
No 298
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=96.14 E-value=0.0011 Score=56.41 Aligned_cols=45 Identities=22% Similarity=0.400 Sum_probs=26.2
Q ss_pred CCCCCcccCCCCCCCCCceeCCCCceEeCCCCCeecCCCCceecCccee
Q psy17325 27 GCDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNECE 75 (461)
Q Consensus 27 ~C~~~~C~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~d~~eC~ 75 (461)
.|..++|..+++.....|.+..++|.|.|++||. |..|++++||.
T Consensus 116 ICe~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~----G~~Ce~~~~c~ 160 (162)
T 1g1s_A 116 LCYTASCQDMSCSKQGECLETIGNYTCSCYPGFY----GPECEYVRDDD 160 (162)
T ss_dssp EEEECCCCTTGGGGSEEEEECSSSEEEEECTTEE----STTSCEECC--
T ss_pred EEEeCCCcCCCCCCCCEEecCCCCceEeCCCCCc----CcccccCcccC
Confidence 3455566544422234577777777777777775 45677776664
No 299
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.14 E-value=0.96 Score=43.00 Aligned_cols=109 Identities=11% Similarity=0.031 Sum_probs=66.3
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCc
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~ 229 (461)
.+..+++.+..++++++-...+.|.+.+++........... .....+++.+......++++- .....|...++.....
T Consensus 101 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~d~~~~~~ 178 (408)
T 4a11_B 101 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFE-ETVYSHHMSPVSTKHCLVAVG-TRGPKVQLCDLKSGSC 178 (408)
T ss_dssp CEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECS-SCEEEEEECSSCSSCCEEEEE-ESSSSEEEEESSSSCC
T ss_pred cEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCC-CceeeeEeecCCCCCcEEEEE-cCCCeEEEEeCCCcce
Confidence 45567776656667777777889999998876655444422 346677777653211344443 3446788888764443
Q ss_pred EEEEecccccceeEEeeccCCeeEEecCCCc
Q psy17325 230 STIISTKIYWPNGLTLDIATRRVYFADSKLD 260 (461)
Q Consensus 230 ~~i~~~~~~~P~glavD~~~~~ly~~d~~~~ 260 (461)
...+.........+++.+.+..++++-...+
T Consensus 179 ~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg 209 (408)
T 4a11_B 179 SHILQGHRQEILAVSWSPRYDYILATASADS 209 (408)
T ss_dssp CEEECCCCSCEEEEEECSSCTTEEEEEETTS
T ss_pred eeeecCCCCcEEEEEECCCCCcEEEEEcCCC
Confidence 3333333445678899887776555544433
No 300
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=96.06 E-value=0.81 Score=48.38 Aligned_cols=96 Identities=14% Similarity=-0.060 Sum_probs=52.6
Q ss_pred eeeeecCCeEEEEeCC--------CCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecC
Q psy17325 154 LAYDWIGGHIYWLDSR--------LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD 225 (461)
Q Consensus 154 iavd~~~~~ly~~d~~--------~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~d 225 (461)
+++.+.++.|.++... .+.+.+.++.+.....+.. ........++.|... +|.++. ...|+..+++
T Consensus 67 ~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~-~~~~~~~~~~SPdG~--~la~~~---~~~i~~~~~~ 140 (740)
T 4a5s_A 67 YSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEER-IPNNTQWVTWSPVGH--KLAYVW---NNDIYVKIEP 140 (740)
T ss_dssp EEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC-CCTTEEEEEECSSTT--CEEEEE---TTEEEEESST
T ss_pred eEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEccc-CCCcceeeEECCCCC--EEEEEE---CCeEEEEECC
Confidence 4555555555544321 1456677777665444332 123456778888755 555543 2468877777
Q ss_pred CCCcEEEEecc------------------cccceeEEeeccCCeeEEe
Q psy17325 226 GSNRSTIISTK------------------IYWPNGLTLDIATRRVYFA 255 (461)
Q Consensus 226 G~~~~~i~~~~------------------~~~P~glavD~~~~~ly~~ 255 (461)
+.....+...+ +....+++..+.+++|.++
T Consensus 141 ~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~ 188 (740)
T 4a5s_A 141 NLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYA 188 (740)
T ss_dssp TSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEE
T ss_pred CCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEE
Confidence 65544332221 1222357788878877765
No 301
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.04 E-value=1.8 Score=45.30 Aligned_cols=202 Identities=10% Similarity=0.048 Sum_probs=110.2
Q ss_pred eeeeeeeecCCeEEEEeCCC----CeEEEEeCCCCcEE-EEecCCCCCceeEEEcCCCCceEEEEeecCC----------
Q psy17325 151 VEGLAYDWIGGHIYWLDSRL----NRIEVCDENGTNRI-VLAKDNITQPRGMMLDPSPGTRWLFWTDWGE---------- 215 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~----~~I~~~~~~G~~~~-~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~---------- 215 (461)
..++++.+.++.|.++-... ..|.+.++++.... ...... ....+++..|... .||++....
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~-~~~~~~~wspDg~--~l~~~~~d~~~~~~~~~~~ 199 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEG-GKYATPKWTPDSK--GFYYEWLPTDPSIKVDERP 199 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSC-CTTCCCEECTTSS--EEEEEECCCCTTSCGGGGG
T ss_pred EEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCc-ccccceEEecCCC--EEEEEEecCCCCCccccCC
Confidence 45667777777665554322 57999998876532 101111 1126788988866 788876321
Q ss_pred -CCcEEEEecCCCCc--EEEEec--ccccceeEEeeccCCeeEEecCCC-ceeeecccceeeeeccceeeeEEEEEecCC
Q psy17325 216 -NPRIERIGMDGSNR--STIIST--KIYWPNGLTLDIATRRVYFADSKL-DFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289 (461)
Q Consensus 216 -~~~I~~~~~dG~~~--~~i~~~--~~~~P~glavD~~~~~ly~~d~~~-~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~ 289 (461)
..+|++.++.+... +.+... .-..-.++++.+.++.|+++.... ..
T Consensus 200 ~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~---------------------------- 251 (695)
T 2bkl_A 200 GYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSE---------------------------- 251 (695)
T ss_dssp GGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTE----------------------------
T ss_pred CCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCc----------------------------
Confidence 24589888876542 233322 112345788888888887754322 11
Q ss_pred CCcceeeeEEeCCCCceEEEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecC-CCCceEEEeecCCCe---EEEee
Q psy17325 290 NGVPLKIGKANMDGSNASILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWG-ENPRIERIGMDGSNR---STIIS 364 (461)
Q Consensus 290 ~~~~~~I~~~~~~g~~~~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~-~~~~I~~~~~dG~~~---~~l~~ 364 (461)
..|+..+..+...+.+..... .... +.+.++ ||+. +++. .+.+|++.++++... +.++.
T Consensus 252 ----~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~g~-l~~~----------s~~~~~~~~l~~~d~~~~~~~~~~~l~~ 315 (695)
T 2bkl_A 252 ----NDVYWKRPGEKDFRLLVKGVGAKYEV-HAWKDR-FYVL----------TDEGAPRQRVFEVDPAKPARASWKEIVP 315 (695)
T ss_dssp ----EEEEEECTTCSSCEEEEECSSCCEEE-EEETTE-EEEE----------ECTTCTTCEEEEEBTTBCSGGGCEEEEC
T ss_pred ----eEEEEEcCCCCceEEeecCCCceEEE-EecCCc-EEEE----------ECCCCCCCEEEEEeCCCCCccCCeEEec
Confidence 235555544333344433221 1111 123444 5543 3333 367899999876542 55552
Q ss_pred CC-CCCceeEEEecCCCeEEEEcCC--CCeEEEEEecCCCCe
Q psy17325 365 TK-IYWPNGLTLDIATRRVYFADSK--LDFIDFCNYDGTGRQ 403 (461)
Q Consensus 365 ~~-l~~p~glaiD~~~~~ly~~d~~--~~~I~~~~~~g~g~~ 403 (461)
.. -....++++. +++|+++-.. ..+|+.+++ +|..
T Consensus 316 ~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~--~g~~ 353 (695)
T 2bkl_A 316 EDSSASLLSVSIV--GGHLSLEYLKDATSEVRVATL--KGKP 353 (695)
T ss_dssp CCSSCEEEEEEEE--TTEEEEEEEETTEEEEEEEET--TCCE
T ss_pred CCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeC--CCCe
Confidence 32 2234567774 7888876443 346777777 4554
No 302
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.99 E-value=1.1 Score=42.18 Aligned_cols=196 Identities=9% Similarity=0.043 Sum_probs=104.0
Q ss_pred eeeeeeeec-CCeEEEEeCCCCeEEEEeCCCCc--EEEEecCCCCCceeEEEcCC--CCceEEEEeecCCCCcEEEEecC
Q psy17325 151 VEGLAYDWI-GGHIYWLDSRLNRIEVCDENGTN--RIVLAKDNITQPRGMMLDPS--PGTRWLFWTDWGENPRIERIGMD 225 (461)
Q Consensus 151 p~~iavd~~-~~~ly~~d~~~~~I~~~~~~G~~--~~~l~~~~~~~p~~ia~d~~--~g~~~ly~td~~~~~~I~~~~~d 225 (461)
+..+++.+. .+++.++-..++.|.+.+++... ..............+++.|. .. .|+.+. ....|...++.
T Consensus 58 v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~l~~~~--~d~~i~v~d~~ 133 (379)
T 3jrp_A 58 VWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGP--LLLVAS--SDGKVSVVEFK 133 (379)
T ss_dssp EEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCS--EEEEEE--TTSEEEEEECC
T ss_pred EEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCC--EEEEec--CCCcEEEEecC
Confidence 445555433 25555566667889999877654 22233333356889999987 44 555554 34577777776
Q ss_pred CCC--cEEEEecccccceeEEeecc-------------CCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCC
Q psy17325 226 GSN--RSTIISTKIYWPNGLTLDIA-------------TRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGN 290 (461)
Q Consensus 226 G~~--~~~i~~~~~~~P~glavD~~-------------~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~ 290 (461)
... ....+.........+++.+. ...|+.+. ..+
T Consensus 134 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg------------------------------ 182 (379)
T 3jrp_A 134 ENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG-ADN------------------------------ 182 (379)
T ss_dssp TTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEE-TTS------------------------------
T ss_pred CCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEe-CCC------------------------------
Confidence 442 23333333445667777763 33333333 222
Q ss_pred CcceeeeEEeCCCCc-e-EEE--EeCC-e-eeeEEEeccC--CeEEEeecCceeeEEEeecCCCCceEEEeecCCC---e
Q psy17325 291 GVPLKIGKANMDGSN-A-SIL--VSGQ-L-YEALALDLEN--GMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSN---R 359 (461)
Q Consensus 291 ~~~~~I~~~~~~g~~-~-~~l--~~~~-~-p~~iavd~~~--~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~---~ 359 (461)
.|...++.... . ..+ +... . ...+++.|.. +.+.++-.. .+.|...++.... .
T Consensus 183 ----~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~------------dg~i~iwd~~~~~~~~~ 246 (379)
T 3jrp_A 183 ----LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ------------DRTCIIWTQDNEQGPWK 246 (379)
T ss_dssp ----CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET------------TSCEEEEEESSTTSCCE
T ss_pred ----eEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeC------------CCEEEEEeCCCCCccce
Confidence 23333332221 1 111 1111 1 7788999873 444444333 3445555554332 2
Q ss_pred EEEeeC--CCCCceeEEEecCCCeEEEEcCCCCeEEEEEec
Q psy17325 360 STIIST--KIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398 (461)
Q Consensus 360 ~~l~~~--~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~ 398 (461)
..+... .-.....+++++.+..|+.+.. .+.|...+++
T Consensus 247 ~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-dg~i~iw~~~ 286 (379)
T 3jrp_A 247 KTLLKEEKFPDVLWRASWSLSGNVLALSGG-DNKVTLWKEN 286 (379)
T ss_dssp EEESSSSCCSSCEEEEEECSSSCCEEEEES-SSSEEEEEEE
T ss_pred eeeeccccCCCcEEEEEEcCCCCEEEEecC-CCcEEEEeCC
Confidence 222211 3334678899877777777654 5666666663
No 303
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.96 E-value=2.2 Score=45.49 Aligned_cols=184 Identities=11% Similarity=0.100 Sum_probs=99.9
Q ss_pred ceeeeeeeecCCe-EEEEeCCCCeEEEEeCCCCcEEEEecC----CCCCceeEEEcCCCCceEEEEeecCCCCcEEEEec
Q psy17325 150 LVEGLAYDWIGGH-IYWLDSRLNRIEVCDENGTNRIVLAKD----NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGM 224 (461)
Q Consensus 150 ~p~~iavd~~~~~-ly~~d~~~~~I~~~~~~G~~~~~l~~~----~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~ 224 (461)
.+.+++.|. .++ ||+. ...+.|.+.+..+.....+... ......+|+.|+. | .|+++. . ..+.+.+.
T Consensus 407 ~v~~i~~d~-~g~~lWig-t~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~-g--~lwigt-~--~Gl~~~~~ 478 (795)
T 4a2l_A 407 NIKAVYVDE-KKSLVYIG-THAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGE-G--NLWLGT-L--SALVRFNP 478 (795)
T ss_dssp CEEEEEEET-TTTEEEEE-ETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSS-S--CEEEEE-S--SCEEEEET
T ss_pred cEEEEEEcC-CCCEEEEE-eCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCC-C--CEEEEe-c--CceeEEeC
Confidence 345667773 456 5554 4446788888775544444321 1134678888875 5 577766 2 46888777
Q ss_pred CCCCcEEEEec----cc--ccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeE
Q psy17325 225 DGSNRSTIIST----KI--YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGK 298 (461)
Q Consensus 225 dG~~~~~i~~~----~~--~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~ 298 (461)
+....+.+... .+ .....|+.|. .++||++.. .+ +.+
T Consensus 479 ~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWigt~-~G-----------------------------------l~~ 521 (795)
T 4a2l_A 479 EQRSFTTIEKEKDGTPVVSKQITTLFRDS-HKRLWIGGE-EG-----------------------------------LSV 521 (795)
T ss_dssp TTTEEEECCBCTTCCBCCCCCEEEEEECT-TCCEEEEES-SC-----------------------------------EEE
T ss_pred CCCeEEEccccccccccCCceEEEEEECC-CCCEEEEeC-Cc-----------------------------------eEE
Confidence 65333322211 11 2456677774 667777654 21 333
Q ss_pred EeCCCCceEEEE----eCCe----eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEee-CCC--
Q psy17325 299 ANMDGSNASILV----SGQL----YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS-TKI-- 367 (461)
Q Consensus 299 ~~~~g~~~~~l~----~~~~----p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~-~~l-- 367 (461)
.+.+.... .+. ...+ ..+|..|. .|.|+++... .|.+.+.+....+.+.. .++
T Consensus 522 ~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~-~g~lWigT~~--------------Gl~~~d~~~~~~~~~~~~~gl~~ 585 (795)
T 4a2l_A 522 FKQEGLDI-QKASILPVSNVTKLFTNCIYEAS-NGIIWVGTRE--------------GFYCFNEKDKQIKRYNTTNGLPN 585 (795)
T ss_dssp EEEETTEE-EECCCSCSCGGGGSCEEEEEECT-TSCEEEEESS--------------CEEEEETTTTEEEEECGGGTCSC
T ss_pred EeCCCCeE-EEecCCCCCCCCCCeeEEEEECC-CCCEEEEeCC--------------CceeECCCCCcEEEeCCCCCCch
Confidence 33333222 111 0111 56778884 6777776543 35555544332222211 122
Q ss_pred CCceeEEEecCCCeEEEEcCCCCeEEEEEe
Q psy17325 368 YWPNGLTLDIATRRVYFADSKLDFIDFCNY 397 (461)
Q Consensus 368 ~~p~glaiD~~~~~ly~~d~~~~~I~~~~~ 397 (461)
....+|+.| .+++||++- .+-|.+++.
T Consensus 586 ~~i~~i~~d-~~g~lWi~t--~~Gl~~~~~ 612 (795)
T 4a2l_A 586 NVVYGILED-SFGRLWLST--NRGISCFNP 612 (795)
T ss_dssp SCEEEEEEC-TTSCEEEEE--TTEEEEEET
T ss_pred hheEEEEEC-CCCCEEEEc--CCceEEEcC
Confidence 235678888 678898875 356888888
No 304
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=95.93 E-value=0.97 Score=42.20 Aligned_cols=146 Identities=11% Similarity=0.031 Sum_probs=78.3
Q ss_pred ceeeeeeeec---CCeEEEEeCCCCeEEEEeCC-CCcEEEEec----CCCCCceeEEEcCCCC--ceEEEEeecCCCCcE
Q psy17325 150 LVEGLAYDWI---GGHIYWLDSRLNRIEVCDEN-GTNRIVLAK----DNITQPRGMMLDPSPG--TRWLFWTDWGENPRI 219 (461)
Q Consensus 150 ~p~~iavd~~---~~~ly~~d~~~~~I~~~~~~-G~~~~~l~~----~~~~~p~~ia~d~~~g--~~~ly~td~~~~~~I 219 (461)
.+.++++.+. +..++++-...+.|.+.+.. +.....+.. ........+++.|... +++|+.+. ....|
T Consensus 20 ~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~--~dg~i 97 (366)
T 3k26_A 20 PLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG--SRGII 97 (366)
T ss_dssp CEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE--TTCEE
T ss_pred ceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec--CCCEE
Confidence 3455666652 34444444555688888876 433333321 1123467888877631 11444443 44678
Q ss_pred EEEecCCCCcEEEEecccccceeEEeec-cCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeE
Q psy17325 220 ERIGMDGSNRSTIISTKIYWPNGLTLDI-ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGK 298 (461)
Q Consensus 220 ~~~~~dG~~~~~i~~~~~~~P~glavD~-~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~ 298 (461)
...++........+.........|++.+ ....|+.+.. . +.|..
T Consensus 98 ~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~-d----------------------------------g~i~i 142 (366)
T 3k26_A 98 RIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSK-D----------------------------------HALRL 142 (366)
T ss_dssp EEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEET-T----------------------------------SCEEE
T ss_pred EEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeC-C----------------------------------CeEEE
Confidence 8888775444333443445678888887 4444444333 2 23555
Q ss_pred EeCCCCceEEEEe---CC-e-eeeEEEeccCCeEEEeec
Q psy17325 299 ANMDGSNASILVS---GQ-L-YEALALDLENGMLYYSTL 332 (461)
Q Consensus 299 ~~~~g~~~~~l~~---~~-~-p~~iavd~~~~~lY~t~~ 332 (461)
.++........+. .. . +..++++|.+..|+.+..
T Consensus 143 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 181 (366)
T 3k26_A 143 WNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGM 181 (366)
T ss_dssp EETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEET
T ss_pred EEeecCeEEEEecccccccCceeEEEECCCCCEEEEecC
Confidence 5555433333331 11 1 888999987666655443
No 305
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=95.87 E-value=1.3 Score=42.41 Aligned_cols=72 Identities=6% Similarity=-0.081 Sum_probs=45.6
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCC
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG 226 (461)
.+..+++.+.+. +.++-..++.|.+.++........+.........+++.|... +|+.+. ....|...++..
T Consensus 141 ~v~~~~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~--~l~s~~--~d~~v~iwd~~~ 212 (420)
T 3vl1_A 141 EITKLKFFPSGE-ALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGR--NVLSAS--LDGTIRLWECGT 212 (420)
T ss_dssp CEEEEEECTTSS-EEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTT--EEEEEE--TTSCEEEEETTT
T ss_pred ccEEEEECCCCC-EEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCC--EEEEEc--CCCcEEEeECCC
Confidence 456677776444 455556678999999764433333333335678999999866 666554 335677666653
No 306
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.83 E-value=0.23 Score=48.73 Aligned_cols=154 Identities=11% Similarity=0.086 Sum_probs=89.8
Q ss_pred CceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEec--ccccceeEEeeccCCeeEEecCCCceeeeccccee
Q psy17325 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST--KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270 (461)
Q Consensus 193 ~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~--~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~ 270 (461)
....|+++|..+ .+..+- +....|...+++......++.. .-....+|++.+.++.++++-...
T Consensus 121 ~V~~l~~~P~~~--~~lasG-s~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D----------- 186 (435)
T 4e54_B 121 RATSLAWHPTHP--STVAVG-SKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME----------- 186 (435)
T ss_dssp CEEEEEECSSCT--TCEEEE-ETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS-----------
T ss_pred CEEEEEEeCCCC--CEEEEE-eCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC-----------
Confidence 356788888655 444443 2346777777765444333321 233567888887555544444333
Q ss_pred eeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCe----eeeEEEeccCCeEEEeecCceeeEEEeecCCC
Q psy17325 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL----YEALALDLENGMLYYSTLKCTRWLFWTDWGEN 346 (461)
Q Consensus 271 ~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~----p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~ 346 (461)
+.|...++.+...+++..... ...+++++.+..|.... . .
T Consensus 187 -----------------------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~-~------------d 230 (435)
T 4e54_B 187 -----------------------GTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGD-N------------V 230 (435)
T ss_dssp -----------------------SCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEEC-S------------S
T ss_pred -----------------------CEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEe-C------------C
Confidence 245556666665555554332 56788888666554432 2 4
Q ss_pred CceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEe
Q psy17325 347 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397 (461)
Q Consensus 347 ~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~ 397 (461)
+.|...+++|.....+. ..-....+|++.+.+..++.+-...+.|...++
T Consensus 231 g~i~~wd~~~~~~~~~~-~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~ 280 (435)
T 4e54_B 231 GNVILLNMDGKELWNLR-MHKKKVTHVALNPCCDWFLATASVDQTVKIWDL 280 (435)
T ss_dssp SBEEEEESSSCBCCCSB-CCSSCEEEEEECTTCSSEEEEEETTSBCCEEET
T ss_pred CcEeeeccCcceeEEEe-cccceEEeeeecCCCceEEEEecCcceeeEEec
Confidence 56666666665443332 334456788898777777776555566766666
No 307
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.75 E-value=2.2 Score=45.26 Aligned_cols=224 Identities=10% Similarity=-0.048 Sum_probs=112.9
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEec-------CC--CCCceeEEEcCCCCceEEEEeecCCCCcEEE
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK-------DN--ITQPRGMMLDPSPGTRWLFWTDWGENPRIER 221 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~-------~~--~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~ 221 (461)
+..|..|. .++|++. +..+.|.+.+........+.. .. .....+|+.|.. | .||+... ...|.+
T Consensus 315 v~~i~~D~-~g~lWig-t~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~-g--~lWigt~--~~Gl~~ 387 (781)
T 3v9f_A 315 ARYIFQDS-FNNIWIG-TWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQ-G--KLWIGTD--GGGINV 387 (781)
T ss_dssp EEEEEECS-SCCEEEE-EBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTT-S--CEEEEEB--SSCEEE
T ss_pred EEEEEEeC-CCCEEEE-ecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCC-C--CEEEEeC--CCcEEE
Confidence 45566774 4555544 334567777766544333321 11 134678888875 5 5777542 346777
Q ss_pred EecCCCCcEEEEe-c--ccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeE
Q psy17325 222 IGMDGSNRSTIIS-T--KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGK 298 (461)
Q Consensus 222 ~~~dG~~~~~i~~-~--~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~ 298 (461)
.+......+.+.. . .......|+.|. .++|++..... -+.+
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~lWigt~~~-----------------------------------Gl~~ 431 (781)
T 3v9f_A 388 FENGKRVAIYNKENRELLSNSVLCSLKDS-EGNLWFGTYLG-----------------------------------NISY 431 (781)
T ss_dssp EETTEEEEECC-----CCCSBEEEEEECT-TSCEEEEETTE-----------------------------------EEEE
T ss_pred EECCCCeEEEccCCCCCCCcceEEEEECC-CCCEEEEeccC-----------------------------------CEEE
Confidence 7665322111110 0 112345677774 56666654322 2444
Q ss_pred EeCCCCceEEEEeC----CeeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCC-----CCC
Q psy17325 299 ANMDGSNASILVSG----QLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTK-----IYW 369 (461)
Q Consensus 299 ~~~~g~~~~~l~~~----~~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~-----l~~ 369 (461)
.+......+.+... ..+..|+.|. .+.||++... .|.+.+.+....+.+.... ...
T Consensus 432 ~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~lwigt~~--------------Gl~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (781)
T 3v9f_A 432 YNTRLKKFQIIELEKNELLDVRVFYEDK-NKKIWIGTHA--------------GVFVIDLASKKVIHHYDTSNSQLLENF 496 (781)
T ss_dssp ECSSSCEEEECCSTTTCCCCEEEEEECT-TSEEEEEETT--------------EEEEEESSSSSCCEEECTTTSSCSCSC
T ss_pred EcCCCCcEEEeccCCCCCCeEEEEEECC-CCCEEEEECC--------------ceEEEeCCCCeEEecccCcccccccce
Confidence 44433222222111 1167788884 6777776543 3555554433332222111 245
Q ss_pred ceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeee-CCEEEEEeCCCce
Q psy17325 370 PNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLE-NGMLYYSTEGAEF 445 (461)
Q Consensus 370 p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~lYwtd~~~~~ 445 (461)
+.+|+.| .+++||++-... -+.+++. .+.....+.. ..++. .....+|..+ ++.||++.. .+.
T Consensus 497 i~~i~~d-~~g~lWigt~~~-Gl~~~~~--~~~~~~~~~~-~~~l~-------~~~i~~i~~d~~g~lWi~T~-~Gl 560 (781)
T 3v9f_A 497 VRSIAQD-SEGRFWIGTFGG-GVGIYTP--DMQLVRKFNQ-YEGFC-------SNTINQIYRSSKGQMWLATG-EGL 560 (781)
T ss_dssp EEEEEEC-TTCCEEEEESSS-CEEEECT--TCCEEEEECT-TTTCS-------CSCEEEEEECTTSCEEEEET-TEE
T ss_pred eEEEEEc-CCCCEEEEEcCC-CEEEEeC--CCCeEEEccC-CCCCC-------CCeeEEEEECCCCCEEEEEC-CCc
Confidence 7789998 678898875533 4777777 4443233221 12221 1123566554 467777655 554
No 308
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=95.74 E-value=2.4 Score=44.39 Aligned_cols=208 Identities=10% Similarity=0.108 Sum_probs=106.4
Q ss_pred ceeeeeeeecCCeEEE-EeCC-C--CeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecC-----------
Q psy17325 150 LVEGLAYDWIGGHIYW-LDSR-L--NRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWG----------- 214 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~-~d~~-~--~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~----------- 214 (461)
...++++.+.++.|-+ .+.. . ..|.+.++++........... +..+++.. ... .||++...
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~-k~~~~~Ws-Dg~--~l~y~~~~~~~~~~~~~~~ 205 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV-KFSGISWL-GNE--GFFYSSYDKPDGSELSART 205 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE-ESCCCEEE-TTT--EEEEEESSCCC-------C
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCc-eeccEEEe-CCC--EEEEEEecCcccccccccC
Confidence 3456677776665544 4432 2 368888987665333211111 01234444 333 56665422
Q ss_pred CCCcEEEEecCCCCc--EEEEeccc---ccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCC
Q psy17325 215 ENPRIERIGMDGSNR--STIISTKI---YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGG 289 (461)
Q Consensus 215 ~~~~I~~~~~dG~~~--~~i~~~~~---~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~ 289 (461)
...+|++.++..... +.+....- .+-.++++.+.++.|+++......
T Consensus 206 ~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~---------------------------- 257 (693)
T 3iuj_A 206 DQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTS---------------------------- 257 (693)
T ss_dssp CCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSS----------------------------
T ss_pred CCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCC----------------------------
Confidence 125688887764322 33333211 123467777777777665432210
Q ss_pred CCcceeeeEEeCCCC--ceEEEEeCCeeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCe---EEEee
Q psy17325 290 NGVPLKIGKANMDGS--NASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNR---STIIS 364 (461)
Q Consensus 290 ~~~~~~I~~~~~~g~--~~~~l~~~~~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~---~~l~~ 364 (461)
...|+..++++. ..+.+.......--.+++.++.||+.... -+.+.+|+++++++... +.++.
T Consensus 258 ---~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~---------~~~~~~l~~~d~~~~~~~~~~~l~~ 325 (693)
T 3iuj_A 258 ---GNRLYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNR---------DAPNRRLVTVDAANPGPAHWRDLIP 325 (693)
T ss_dssp ---CCEEEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECT---------TCTTCEEEEEETTSCCGGGCEEEEC
T ss_pred ---CcEEEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECC---------CCCCCEEEEEeCCCCCccccEEEec
Confidence 024666776544 23333322111111155667777764322 12357899999887654 55553
Q ss_pred CCCCCceeEEEecCCCeEEEEcCCC--CeEEEEEecCCCCeEEE
Q psy17325 365 TKIYWPNGLTLDIATRRVYFADSKL--DFIDFCNYDGTGRQQVI 406 (461)
Q Consensus 365 ~~l~~p~glaiD~~~~~ly~~d~~~--~~I~~~~~~g~g~~~~~ 406 (461)
..-. .. .+++.+++|+++.... .+|..+++ +|.....
T Consensus 326 ~~~~-~~--~~s~~g~~lv~~~~~~g~~~l~~~d~--~g~~~~~ 364 (693)
T 3iuj_A 326 ERQQ-VL--TVHSGSGYLFAEYMVDATARVEQFDY--EGKRVRE 364 (693)
T ss_dssp CCSS-CE--EEEEETTEEEEEEEETTEEEEEEECT--TSCEEEE
T ss_pred CCCC-EE--EEEEECCEEEEEEEECCeeEEEEEEC--CCCeeEE
Confidence 3322 22 5555788888764433 47888888 4554433
No 309
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.65 E-value=2.6 Score=44.57 Aligned_cols=196 Identities=9% Similarity=0.053 Sum_probs=101.5
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEE--EecCCCCCceeEEEcCC--CCceEEEEeecCCCCcEEEEecCC
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIV--LAKDNITQPRGMMLDPS--PGTRWLFWTDWGENPRIERIGMDG 226 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~--l~~~~~~~p~~ia~d~~--~g~~~ly~td~~~~~~I~~~~~dG 226 (461)
+..+++.+.+..| .+-..++.|.+.++.+..... .+...-.....+++.+. .. +|+.+. ..+.|...++.+
T Consensus 12 V~~l~~s~dg~~l-atg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~--~l~s~s--~Dg~I~vwd~~~ 86 (753)
T 3jro_A 12 IHDAVLDYYGKRL-ATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGT--ILASCS--YDGKVLIWKEEN 86 (753)
T ss_dssp EEEECCCSSSCCE-EEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCS--EEEEEE--TTSCEEEEEEET
T ss_pred eEEEEECCCCCeE-EEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCC--EEEEEe--CCCeEEEEECCC
Confidence 4456666544444 444557888888876443222 23333345678888776 34 555544 345777777765
Q ss_pred CCcEEE--EecccccceeEEeecc--CCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCC
Q psy17325 227 SNRSTI--ISTKIYWPNGLTLDIA--TRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMD 302 (461)
Q Consensus 227 ~~~~~i--~~~~~~~P~glavD~~--~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~ 302 (461)
.....+ ..........+++.+. +..|+.+.... .|...++.
T Consensus 87 ~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg-----------------------------------~I~vwdl~ 131 (753)
T 3jro_A 87 GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG-----------------------------------KVSVVEFK 131 (753)
T ss_dssp TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS-----------------------------------EEEEEECC
T ss_pred CcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCC-----------------------------------cEEEEEee
Confidence 432222 2223345678888876 44554444332 23444433
Q ss_pred CC--ceEEEEeCC-e-eeeEEEecc------------CCeEEEeecCceeeEEEeecCCCCceEEEeecCCCe-EEE---
Q psy17325 303 GS--NASILVSGQ-L-YEALALDLE------------NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNR-STI--- 362 (461)
Q Consensus 303 g~--~~~~l~~~~-~-p~~iavd~~------------~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~-~~l--- 362 (461)
.. ......... . ...+++.|. ++.+.++-.. .+.|...++..... ..+
T Consensus 132 ~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~------------dg~I~iwd~~~~~~~~~~~~~ 199 (753)
T 3jro_A 132 ENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA------------DNLVKIWKYNSDAQTYVLEST 199 (753)
T ss_dssp SSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEET------------TSCEEEEEEETTTTEEEEEEE
T ss_pred cCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEEC------------CCeEEEEeccCCcccceeeee
Confidence 32 111112211 1 667777764 2333333332 44555555543321 111
Q ss_pred eeCCCCCceeEEEecCC--CeEEEEcCCCCeEEEEEec
Q psy17325 363 ISTKIYWPNGLTLDIAT--RRVYFADSKLDFIDFCNYD 398 (461)
Q Consensus 363 ~~~~l~~p~glaiD~~~--~~ly~~d~~~~~I~~~~~~ 398 (461)
+...-....+|++.+.. +++.++-...+.|...++.
T Consensus 200 ~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~ 237 (753)
T 3jro_A 200 LEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 237 (753)
T ss_dssp ECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEES
T ss_pred ecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCC
Confidence 11334457789998663 5555555556778888873
No 310
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=95.60 E-value=0.0057 Score=63.00 Aligned_cols=37 Identities=32% Similarity=0.679 Sum_probs=29.2
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCC
Q psy17325 2 ADRCVNLTKVCDGKTDCPNGADEGPGCDLAECKHKFGLCS 41 (461)
Q Consensus 2 ~~~Ci~~~~~Cd~~~dC~dg~de~~~C~~~~C~~~~~~C~ 41 (461)
++.||+..++|||..||+|++|| ..|. .|....+.|.
T Consensus 213 ~~~ci~~~~~Cdg~~dC~d~sDE-~~C~--~c~~~~~~C~ 249 (565)
T 2xrc_A 213 NGKYISQMKACDGINDCGDQSDE-LCCK--ACQGKGFHCK 249 (565)
T ss_dssp TSCBCCTTSTTSSSCCSSSSSSS-SSBS--SCSSSCEEET
T ss_pred CCCccCHHHcCCCcccCCCCccc-cccc--ccCCCceecC
Confidence 57899999999999999999999 4574 2655544453
No 311
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=95.58 E-value=0.0075 Score=40.54 Aligned_cols=37 Identities=24% Similarity=0.512 Sum_probs=25.9
Q ss_pred CCcccCC-CCCCC--CCce--eCCCCceEeCCCCCeecCCCCceec
Q psy17325 30 LAECKHK-FGLCS--NTCH--PTPLGALCTCPPGEILSNDSVTCQD 70 (461)
Q Consensus 30 ~~~C~~~-~~~C~--~~C~--~~~~~~~C~C~~G~~l~~~~~~C~d 70 (461)
+++|.++ ...|. ..|. +..++|.|.|++||. +..|+.
T Consensus 3 i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce~ 44 (53)
T 1egf_A 3 YPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYS----GDRCQT 44 (53)
T ss_dssp ECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCC----SSSSCC
T ss_pred cccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCc----CCcCCc
Confidence 4566653 12454 4698 778999999999995 567753
No 312
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=95.57 E-value=0.0054 Score=42.95 Aligned_cols=41 Identities=27% Similarity=0.547 Sum_probs=28.7
Q ss_pred CcccCCCCCCCCCcee-----CCCCceEeCCCCCeecCCCCcee-cCccee
Q psy17325 31 AECKHKFGLCSNTCHP-----TPLGALCTCPPGEILSNDSVTCQ-DMNECE 75 (461)
Q Consensus 31 ~~C~~~~~~C~~~C~~-----~~~~~~C~C~~G~~l~~~~~~C~-d~~eC~ 75 (461)
++|..+++.-...|.+ ..++|.|.|++||. +..|+ ++++|.
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~----G~~Ce~~i~~~~ 53 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFT----GARCTENVPMKV 53 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEE----STTSCEECCSSC
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCc----CCccCcCcCccc
Confidence 3565554333457886 56789999999996 67885 677664
No 313
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=95.56 E-value=2.2 Score=45.01 Aligned_cols=73 Identities=11% Similarity=0.103 Sum_probs=44.9
Q ss_pred eEEEeccCCeEE-EeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCcee-EEEecCCCeEEEEcCC------
Q psy17325 317 ALALDLENGMLY-YSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNG-LTLDIATRRVYFADSK------ 388 (461)
Q Consensus 317 ~iavd~~~~~lY-~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~g-laiD~~~~~ly~~d~~------ 388 (461)
..+..|.+..|+ |. ++......|+..+++|...+.|. ..-..... +.+| +++||++-..
T Consensus 323 ~p~fspDG~~l~~~~----------s~~~G~~~l~~~~~~~~~~~~lT-~g~~~v~~~~~~d--~~~i~f~~~~~~~~~~ 389 (740)
T 4a5s_A 323 EPHFTLDGNSFYKII----------SNEEGYRHICYFQIDKKDCTFIT-KGTWEVIGIEALT--SDYLYYISNEYKGMPG 389 (740)
T ss_dssp CCEECTTSSEEEEEE----------ECTTSCEEEEEEETTCSSCEESC-CSSSCEEEEEEEC--SSEEEEEESCGGGCTT
T ss_pred CceEcCCCCEEEEEE----------EcCCCceEEEEEECCCCceEecc-cCCEEEEEEEEEe--CCEEEEEEecCCCCCc
Confidence 566777666554 32 22233567999999988777665 33222223 3355 7889987543
Q ss_pred CCeEEEEEecCCCCeE
Q psy17325 389 LDFIDFCNYDGTGRQQ 404 (461)
Q Consensus 389 ~~~I~~~~~~g~g~~~ 404 (461)
...|+++++ +|...
T Consensus 390 ~~~ly~v~~--~g~~~ 403 (740)
T 4a5s_A 390 GRNLYKIQL--IDYTK 403 (740)
T ss_dssp CBEEEEEET--TEEEE
T ss_pred eeEEEEEEC--CCCCc
Confidence 358999999 45543
No 314
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=95.47 E-value=1.5 Score=40.29 Aligned_cols=103 Identities=9% Similarity=0.062 Sum_probs=60.9
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCc-
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR- 229 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~- 229 (461)
...+++.+.+ ++.++-..++.|.+.++........+...-.....|++.|... +|+-+. ....|...++.....
T Consensus 58 v~~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~--~l~sgs--~D~~v~lWd~~~~~~~ 132 (304)
T 2ynn_A 58 VRAGKFIARK-NWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKP--YVLSGS--DDLTVKLWNWENNWAL 132 (304)
T ss_dssp EEEEEEEGGG-TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSS--EEEEEE--TTSCEEEEEGGGTTEE
T ss_pred EEEEEEeCCC-CEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCC--EEEEEC--CCCeEEEEECCCCcch
Confidence 3456666544 4445556678999999765544433444445678999999866 555444 445777777664322
Q ss_pred EEEEecccccceeEEeeccCCeeEEecCC
Q psy17325 230 STIISTKIYWPNGLTLDIATRRVYFADSK 258 (461)
Q Consensus 230 ~~i~~~~~~~P~glavD~~~~~ly~~d~~ 258 (461)
...+.........+++.+..+.++.+-..
T Consensus 133 ~~~~~~h~~~v~~v~~~p~~~~~l~sgs~ 161 (304)
T 2ynn_A 133 EQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (304)
T ss_dssp EEEECCCCSCEEEEEECTTCTTEEEEEET
T ss_pred hhhhcccCCcEEEEEECCCCCCEEEEEeC
Confidence 22333333456788888755554444333
No 315
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=95.46 E-value=0.0073 Score=61.64 Aligned_cols=27 Identities=41% Similarity=1.046 Sum_probs=24.8
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCCCCCC
Q psy17325 2 ADRCVNLTKVCDGKTDCPNGADEGPGCD 29 (461)
Q Consensus 2 ~~~Ci~~~~~Cd~~~dC~dg~de~~~C~ 29 (461)
+|+||+..|+|||..||.|++|| ..|.
T Consensus 75 ~g~Ci~~~~~Cdg~~dC~d~sDE-~~C~ 101 (554)
T 3ojy_A 75 TGRCLKRHLVCNGDQDCLDGSDE-DDCE 101 (554)
T ss_dssp SCCEECGGGTTSSSCCSSSCTTS-SSCC
T ss_pred CCEEcccccccCCcccCCCcccc-ccCC
Confidence 68999999999999999999999 5675
No 316
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.40 E-value=1.9 Score=40.89 Aligned_cols=206 Identities=8% Similarity=-0.054 Sum_probs=107.5
Q ss_pred ceeeeeeeec---CC---eEEEEeCCCCeEEEEeCCCCc------EEEEecCC----CCCceeEEEc----CCCCceE-E
Q psy17325 150 LVEGLAYDWI---GG---HIYWLDSRLNRIEVCDENGTN------RIVLAKDN----ITQPRGMMLD----PSPGTRW-L 208 (461)
Q Consensus 150 ~p~~iavd~~---~~---~ly~~d~~~~~I~~~~~~G~~------~~~l~~~~----~~~p~~ia~d----~~~g~~~-l 208 (461)
.+..+++.+. .+ ++.++-...+.|.+.++.... ...+.... -.....+++. |... . |
T Consensus 64 ~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~l 141 (397)
T 1sq9_A 64 GLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLS--HRL 141 (397)
T ss_dssp CEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----C--EEE
T ss_pred cEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCc--eEE
Confidence 3566777655 14 555555567889888876554 33332211 2567889999 7755 6 5
Q ss_pred EEeecCCCCcEEEEecCC-------CCcE-----EEE------ecccccceeEEeeccCCeeEEecCCCceeeeccccee
Q psy17325 209 FWTDWGENPRIERIGMDG-------SNRS-----TII------STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIK 270 (461)
Q Consensus 209 y~td~~~~~~I~~~~~dG-------~~~~-----~i~------~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~ 270 (461)
+.+. ....|...++.. .... .+. ......+..+++.+.+ .|+.+. ..+
T Consensus 142 ~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~-~dg---------- 207 (397)
T 1sq9_A 142 VATD--VKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGF-NNG---------- 207 (397)
T ss_dssp EEEE--TTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEEC-TTS----------
T ss_pred EEEe--CCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEe-CCC----------
Confidence 5554 335666666554 2222 332 1223457788998766 444433 332
Q ss_pred eeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeC-------Ce-eeeEEEeccCCeEEEeecCceeeEEEee
Q psy17325 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSG-------QL-YEALALDLENGMLYYSTLKCTRWLFWTD 342 (461)
Q Consensus 271 ~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~-------~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d 342 (461)
.|...++........+.. .. +..++++|.+..|+.+...
T Consensus 208 ------------------------~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d--------- 254 (397)
T 1sq9_A 208 ------------------------TVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDS--------- 254 (397)
T ss_dssp ------------------------EEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEE---------
T ss_pred ------------------------cEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecC---------
Confidence 345555543333223332 22 7889999876655544321
Q ss_pred cCCCCceEEEeecCCCeEEEeeC-------------CCCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEE
Q psy17325 343 WGENPRIERIGMDGSNRSTIIST-------------KIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407 (461)
Q Consensus 343 ~~~~~~I~~~~~dG~~~~~l~~~-------------~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~ 407 (461)
+..+.|...++........+.. .-.....|++.+.+..|+.+ ...+.|...++. ++.....+
T Consensus 255 -~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~-~~~~~~~~ 329 (397)
T 1sq9_A 255 -NSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSA-GWDGKLRFWDVK-TKERITTL 329 (397)
T ss_dssp -TTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEE-ETTSEEEEEETT-TTEEEEEE
T ss_pred -CCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEE-eCCCeEEEEEcC-CCceeEEE
Confidence 0003344444322221111212 34456788998665555554 456789999983 45443433
No 317
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=95.28 E-value=2.1 Score=40.71 Aligned_cols=196 Identities=10% Similarity=0.062 Sum_probs=102.9
Q ss_pred eeeeeeeecCCeEEEEeC-CCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecC-CCC
Q psy17325 151 VEGLAYDWIGGHIYWLDS-RLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD-GSN 228 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~-~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~d-G~~ 228 (461)
+..+++.+.+..|.++-. ..+.|.+.++........+... ....+|++.|... +|..+. ...+.+.... |..
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~-~~V~~v~fspdg~--~l~s~s---~~~~~~~~~~~~~~ 209 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETR-GEVKDLHFSTDGK--VVAYIT---GSSLEVISTVTGSC 209 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECS-SCCCEEEECTTSS--EEEEEC---SSCEEEEETTTCCE
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCC-CceEEEEEccCCc--eEEecc---ceeEEEEEeccCcc
Confidence 456788887777776554 4678999997765544444332 4578999999755 555433 2345555443 322
Q ss_pred cEEEEec-ccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceE
Q psy17325 229 RSTIIST-KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS 307 (461)
Q Consensus 229 ~~~i~~~-~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~ 307 (461)
....... .-.....+++.+.+..|..+....... ..+...+.......
T Consensus 210 ~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~-------------------------------~~i~~~~~~~~~~~ 258 (365)
T 4h5i_A 210 IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKG-------------------------------IVLTKISIKSGNTS 258 (365)
T ss_dssp EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCC-------------------------------EEEEEEEEETTEEE
T ss_pred eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcce-------------------------------eEEeecccccceec
Confidence 2111111 122356788887666555443222100 01222222222111
Q ss_pred E----EEeCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeec-CCCeEEEeeCCCCCceeEEEecCCC
Q psy17325 308 I----LVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD-GSNRSTIISTKIYWPNGLTLDIATR 380 (461)
Q Consensus 308 ~----l~~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~d-G~~~~~l~~~~l~~p~glaiD~~~~ 380 (461)
. .+.... ...+++.|.+..|..... .+.|.-.++. |+....+....-....+|++.++ +
T Consensus 259 ~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~-------------D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpd-g 324 (365)
T 4h5i_A 259 VLRSKQVTNRFKGITSMDVDMKGELAVLASN-------------DNSIALVKLKDLSMSKIFKQAHSFAITEVTISPD-S 324 (365)
T ss_dssp EEEEEEEESSCSCEEEEEECTTSCEEEEEET-------------TSCEEEEETTTTEEEEEETTSSSSCEEEEEECTT-S
T ss_pred ceeeeeecCCCCCeEeEEECCCCCceEEEcC-------------CCEEEEEECCCCcEEEEecCcccCCEEEEEECCC-C
Confidence 1 111111 678899987766554432 3445444543 22223333233456789999865 4
Q ss_pred eEEEEcCCCCeEEEEEe
Q psy17325 381 RVYFADSKLDFIDFCNY 397 (461)
Q Consensus 381 ~ly~~d~~~~~I~~~~~ 397 (461)
++..+-+..++|...++
T Consensus 325 ~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 325 TYVASVSAANTIHIIKL 341 (365)
T ss_dssp CEEEEEETTSEEEEEEC
T ss_pred CEEEEEeCCCeEEEEEc
Confidence 44455455677777777
No 318
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=95.26 E-value=0.0084 Score=61.09 Aligned_cols=27 Identities=41% Similarity=0.984 Sum_probs=24.7
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCCCCCC
Q psy17325 2 ADRCVNLTKVCDGKTDCPNGADEGPGCD 29 (461)
Q Consensus 2 ~~~Ci~~~~~Cd~~~dC~dg~de~~~C~ 29 (461)
+|+||+..|+|||..||.||+|| ..|.
T Consensus 76 ~g~Ci~~~~~Cdg~~dC~d~sdE-~~c~ 102 (537)
T 3ojy_B 76 TGRCVNRRLLCNGDNDCGDQSDE-ANCR 102 (537)
T ss_dssp TCCEECGGGTTSSSCCSSSSCTT-SSCS
T ss_pred CCcEeeccccCCCCCCCCCcccc-ccCC
Confidence 68999999999999999999999 5664
No 319
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=95.26 E-value=0.16 Score=53.37 Aligned_cols=97 Identities=10% Similarity=-0.040 Sum_probs=61.5
Q ss_pred eeeeeeeecCCeEEEEeC--------CCCeEEEEeCCCCcE---EEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcE
Q psy17325 151 VEGLAYDWIGGHIYWLDS--------RLNRIEVCDENGTNR---IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRI 219 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~--------~~~~I~~~~~~G~~~---~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I 219 (461)
...+++.+.++.|.++.. ..+.|.+.++++... ..+. .....+++.|... +|.++. ...|
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~----~~~~~~~~SPDG~--~la~~~---~~~i 132 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP----RPIQYLCWSPVGS--KLAYVY---QNNI 132 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC----SSBCCEEECSSTT--CEEEEE---TTEE
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC----cccccceECCCCC--EEEEEE---CCeE
Confidence 456777777777766543 246899999887654 2221 3366789999865 666654 2478
Q ss_pred EEEecCCCCcEEEEeccc------------------ccceeEEeeccCCeeEEec
Q psy17325 220 ERIGMDGSNRSTIISTKI------------------YWPNGLTLDIATRRVYFAD 256 (461)
Q Consensus 220 ~~~~~dG~~~~~i~~~~~------------------~~P~glavD~~~~~ly~~d 256 (461)
+..++++.....+...+. ....++++.+.++.|+++.
T Consensus 133 ~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~ 187 (719)
T 1z68_A 133 YLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAE 187 (719)
T ss_dssp EEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEE
T ss_pred EEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEE
Confidence 888887655444332211 1224788888888887754
No 320
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.15 E-value=2.4 Score=40.64 Aligned_cols=241 Identities=9% Similarity=0.046 Sum_probs=121.3
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcE
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS 230 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~ 230 (461)
...+++.+.+ +...+-..++.|.+.++........+.........+++.|... +|+-+. ....|...++......
T Consensus 126 v~~v~~s~dg-~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~--~l~s~s--~d~~v~iwd~~~~~~~ 200 (393)
T 1erj_A 126 IRSVCFSPDG-KFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGD--KLVSGS--GDRTVRIWDLRTGQCS 200 (393)
T ss_dssp EEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS--EEEEEE--TTSEEEEEETTTTEEE
T ss_pred EEEEEECCCC-CEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCC--EEEEec--CCCcEEEEECCCCeeE
Confidence 4567776644 4455556678999999887665555554445678899998866 666544 3456777777543322
Q ss_pred EEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCc-eEEE
Q psy17325 231 TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN-ASIL 309 (461)
Q Consensus 231 ~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~-~~~l 309 (461)
..+. .......+++.+..++++.+-...+. |...++.... ...+
T Consensus 201 ~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~----------------------------------v~iwd~~~~~~~~~~ 245 (393)
T 1erj_A 201 LTLS-IEDGVTTVAVSPGDGKYIAAGSLDRA----------------------------------VRVWDSETGFLVERL 245 (393)
T ss_dssp EEEE-CSSCEEEEEECSTTCCEEEEEETTSC----------------------------------EEEEETTTCCEEEEE
T ss_pred EEEE-cCCCcEEEEEECCCCCEEEEEcCCCc----------------------------------EEEEECCCCcEEEee
Confidence 2222 22345677777645554444333322 3333332221 1111
Q ss_pred E------e--CCeeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEE--eecCCCeEEEeeCCCCCceeEEEecCC
Q psy17325 310 V------S--GQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI--GMDGSNRSTIISTKIYWPNGLTLDIAT 379 (461)
Q Consensus 310 ~------~--~~~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~--~~dG~~~~~l~~~~l~~p~glaiD~~~ 379 (461)
. . ......+++.|.+..|+-.... .....|. .......... ...+.....+. ..-.....+++.+.+
T Consensus 246 ~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d-~~v~~wd-~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~ 322 (393)
T 1erj_A 246 DSENESGTGHKDSVYSVVFTRDGQSVVSGSLD-RSVKLWN-LQNANNKSDSKTPNSGTCEVTYI-GHKDFVLSVATTQND 322 (393)
T ss_dssp C------CCCSSCEEEEEECTTSSEEEEEETT-SEEEEEE-C---------------CEEEEEE-CCSSCEEEEEECGGG
T ss_pred cccccCCCCCCCCEEEEEECCCCCEEEEEeCC-CEEEEEE-CCCCCCcccccCCCCCcceEEEe-cccCcEEEEEECCCC
Confidence 0 0 1116788898876666544332 2233332 1110000000 00111112222 333456678887555
Q ss_pred CeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeee-------CCEEEEEeCCCceeec
Q psy17325 380 RRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLE-------NGMLYYSTEGAEFLKT 448 (461)
Q Consensus 380 ~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~lYwtd~~~~~i~~ 448 (461)
..|. +-...+.|...++. +|.....+.. ... ...++++. ++.++.|-...++||+
T Consensus 323 ~~l~-sgs~D~~v~iwd~~-~~~~~~~l~~-h~~-----------~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~i 384 (393)
T 1erj_A 323 EYIL-SGSKDRGVLFWDKK-SGNPLLMLQG-HRN-----------SVISVAVANGSSLGPEYNVFATGSGDCKARI 384 (393)
T ss_dssp CEEE-EEETTSEEEEEETT-TCCEEEEEEC-CSS-----------CEEEEEECSSCTTCTTCEEEEEEETTSEEEE
T ss_pred CEEE-EEeCCCeEEEEECC-CCeEEEEECC-CCC-----------CEEEEEecCCcCcCCCCCEEEEECCCCcEEE
Confidence 5554 43455678888872 4554333322 111 12344443 3567777777787764
No 321
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.13 E-value=0.95 Score=42.82 Aligned_cols=103 Identities=7% Similarity=-0.110 Sum_probs=54.8
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCc---EEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCC
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN---RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG 226 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~---~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG 226 (461)
.+..+++.+.+ ++.++-..++.|.+.++.... ....+...-.....+++.|... +|+... ....|...+++.
T Consensus 57 ~v~~~~~s~~~-~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~--~d~~i~iwd~~~ 131 (377)
T 3dwl_C 57 IVTCVDWAPKS-NRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNED--KFAVGS--GARVISVCYFEQ 131 (377)
T ss_dssp CEEEEEECTTT-CCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSS--CCEEEE--SSSCEEECCC--
T ss_pred eEEEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCC--EEEEEe--cCCeEEEEEECC
Confidence 34566776544 444455557888888876544 2222333335578899998755 666555 345677767665
Q ss_pred CC----cEEEEecccccceeEEeeccCCeeEEecC
Q psy17325 227 SN----RSTIISTKIYWPNGLTLDIATRRVYFADS 257 (461)
Q Consensus 227 ~~----~~~i~~~~~~~P~glavD~~~~~ly~~d~ 257 (461)
.. ...+..........+++.+.+..|..+..
T Consensus 132 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 166 (377)
T 3dwl_C 132 ENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA 166 (377)
T ss_dssp ---CCCCEEECSSCCSCEEEEEECTTSSEEEEEES
T ss_pred cccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC
Confidence 43 23332213446778899886666655443
No 322
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=95.12 E-value=0.0013 Score=60.09 Aligned_cols=66 Identities=9% Similarity=-0.112 Sum_probs=44.0
Q ss_pred CcccCCCCCCCCCceeCCCCceEeCCCCCeecCCCCcee-cCccee----------------------------cCCccc
Q psy17325 31 AECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ-DMNECE----------------------------QPGYCS 81 (461)
Q Consensus 31 ~~C~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~-d~~eC~----------------------------~~~~C~ 81 (461)
++|.+.+..-...|++...+|+|.|++||.. ..|+ ++++|. ....|.
T Consensus 100 ~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G----~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ 175 (267)
T 4fbr_A 100 IVAVSIKSNDGGKTLTGTTTYNGEGPIGFKS----EVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSN 175 (267)
T ss_dssp EEEEEEECSSTTSEEEEEEEETTSCCEEEEE----EECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECS
T ss_pred cccCCCCCCCCCEEecCCccEEeeCCCCccc----cCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCC
Confidence 4666655444567999999999999999963 2332 122211 012232
Q ss_pred --CceeeccCCccccCCCCee
Q psy17325 82 --QMCTNTKGSYICSCNEGYV 100 (461)
Q Consensus 82 --~~C~~~~g~~~C~C~~g~~ 100 (461)
..|.+...+|.|.|++||+
T Consensus 176 ngg~C~dg~~~y~C~Cp~Gf~ 196 (267)
T 4fbr_A 176 DGGKTLSGTMTYNGEGPIGFR 196 (267)
T ss_dssp STTSEEEEEEEETTSCCEEEE
T ss_pred CCCEeeCCCCCeEEeCCCCcc
Confidence 3788888899999999996
No 323
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.96 E-value=1.8 Score=38.28 Aligned_cols=65 Identities=17% Similarity=0.084 Sum_probs=44.9
Q ss_pred EEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCC-C------CcEEEEecccccceeEEeeccCCeeEEe
Q psy17325 184 IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDG-S------NRSTIISTKIYWPNGLTLDIATRRVYFA 255 (461)
Q Consensus 184 ~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG-~------~~~~i~~~~~~~P~glavD~~~~~ly~~ 255 (461)
+.+...++.+...||++| +| .||... +..+++.+... . ..+.|-..+...-..+.+|+ ++.||.+
T Consensus 33 ~~iG~~gw~~~~~laf~P-~G--~LYaV~---~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~-~G~LYav 104 (236)
T 1tl2_A 33 TLIGKGGWSNFKFLFLSP-GG--ELYGVL---NDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDP-NGYLYAV 104 (236)
T ss_dssp EEEESSSCTTCSEEEECT-TS--CEEEEE---TTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECT-TSCEEEE
T ss_pred cccCccccccceeEEECC-Cc--cEEEEe---CCeEEEECCCCCCcccccccccEecccccccceEEEECC-CCCEEEe
Confidence 445554577889999999 78 899873 45799988732 1 12444443444457899995 8899988
No 324
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=94.86 E-value=2.5 Score=39.29 Aligned_cols=100 Identities=7% Similarity=-0.044 Sum_probs=60.7
Q ss_pred ceeeeeeeecC--CeEEEEeCCCCeEEEEeCCC--CcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecC
Q psy17325 150 LVEGLAYDWIG--GHIYWLDSRLNRIEVCDENG--TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD 225 (461)
Q Consensus 150 ~p~~iavd~~~--~~ly~~d~~~~~I~~~~~~G--~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~d 225 (461)
.+..+++.+.. +++.++-..++.|.+.+++. ......+...-.....+++.|... +|+.+. ....|...++.
T Consensus 41 ~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--~l~s~~--~dg~v~iwd~~ 116 (368)
T 3mmy_A 41 SIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGS--KVFTAS--CDKTAKMWDLS 116 (368)
T ss_dssp CEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSS--EEEEEE--TTSEEEEEETT
T ss_pred ceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCC--EEEEEc--CCCcEEEEEcC
Confidence 35567777654 56677767788899988774 433233433335688999999755 666554 34677777877
Q ss_pred CCCcEEEEecccccceeEEe--eccCCeeEE
Q psy17325 226 GSNRSTIISTKIYWPNGLTL--DIATRRVYF 254 (461)
Q Consensus 226 G~~~~~i~~~~~~~P~glav--D~~~~~ly~ 254 (461)
......+.. .-.....+++ .+....|+.
T Consensus 117 ~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~ 146 (368)
T 3mmy_A 117 SNQAIQIAQ-HDAPVKTIHWIKAPNYSCVMT 146 (368)
T ss_dssp TTEEEEEEE-CSSCEEEEEEEECSSCEEEEE
T ss_pred CCCceeecc-ccCceEEEEEEeCCCCCEEEE
Confidence 554433322 2345667777 543333333
No 325
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=94.80 E-value=0.019 Score=36.96 Aligned_cols=24 Identities=21% Similarity=0.324 Sum_probs=18.7
Q ss_pred CCce--eCCCCceEeCCCCCeecCCCCcee
Q psy17325 42 NTCH--PTPLGALCTCPPGEILSNDSVTCQ 69 (461)
Q Consensus 42 ~~C~--~~~~~~~C~C~~G~~l~~~~~~C~ 69 (461)
..|. +..++|.|.|++||. +..|+
T Consensus 15 g~C~~~~~~~~~~C~C~~G~~----G~~Ce 40 (45)
T 1a3p_A 15 GVXMHIESLDSYTCNCVIGYS----GDRCQ 40 (45)
T ss_dssp CEEEECTTTSSEEEECCTTEE----TTTTC
T ss_pred CEEEeecCCCCEEEEcCCCCc----CCcCC
Confidence 4687 567889999999996 56775
No 326
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=94.77 E-value=3.1 Score=40.08 Aligned_cols=69 Identities=9% Similarity=-0.014 Sum_probs=39.9
Q ss_pred eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCe-----EEEeeCCC------------CCceeEEEec
Q psy17325 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNR-----STIISTKI------------YWPNGLTLDI 377 (461)
Q Consensus 315 p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~-----~~l~~~~l------------~~p~glaiD~ 377 (461)
...++++|.+..++.+-.. .+.|...++..... ..+- ... .....|++.+
T Consensus 229 v~~~~~~p~~~~~l~s~~~------------dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~s~ 295 (447)
T 3dw8_B 229 ITAAEFHPNSCNTFVYSSS------------KGTIRLCDMRASALCDRHSKLFE-EPEDPSNRSFFSEIISSISDVKFSH 295 (447)
T ss_dssp EEEEEECSSCTTEEEEEET------------TSCEEEEETTTCSSSCTTCEEEC-CC-----CCHHHHHTTCEEEEEECT
T ss_pred eEEEEECCCCCcEEEEEeC------------CCeEEEEECcCCccccceeeEec-cCCCccccccccccCceEEEEEECC
Confidence 7788999876344444333 34455555433222 2222 222 2577899987
Q ss_pred CCCeEEEEcCCCCeEEEEEec
Q psy17325 378 ATRRVYFADSKLDFIDFCNYD 398 (461)
Q Consensus 378 ~~~~ly~~d~~~~~I~~~~~~ 398 (461)
.+..|..+.. +.|...++.
T Consensus 296 ~g~~l~~~~~--~~v~iwd~~ 314 (447)
T 3dw8_B 296 SGRYMMTRDY--LSVKVWDLN 314 (447)
T ss_dssp TSSEEEEEES--SEEEEEETT
T ss_pred CCCEEEEeeC--CeEEEEeCC
Confidence 6556665544 889888884
No 327
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=94.72 E-value=2.9 Score=39.49 Aligned_cols=95 Identities=7% Similarity=-0.019 Sum_probs=53.2
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEec-------------CCCCCceeEEEcCCCCceEEEEeecCCC
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK-------------DNITQPRGMMLDPSPGTRWLFWTDWGEN 216 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~-------------~~~~~p~~ia~d~~~g~~~ly~td~~~~ 216 (461)
.+..+++.+..+++.++-..++.|.+.+++......... ........+++.|..+ .++++- +..
T Consensus 45 ~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~l~s~-~~d 121 (408)
T 4a11_B 45 GINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDT--GMFTSS-SFD 121 (408)
T ss_dssp CEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCT--TCEEEE-ETT
T ss_pred cEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCC--cEEEEE-eCC
Confidence 455677766345556666667889999877543211110 1234577899988544 344444 344
Q ss_pred CcEEEEecCCCCcEEEEecccccceeEEeecc
Q psy17325 217 PRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 248 (461)
Q Consensus 217 ~~I~~~~~dG~~~~~i~~~~~~~P~glavD~~ 248 (461)
..|...++.......... .......+++.+.
T Consensus 122 ~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~ 152 (408)
T 4a11_B 122 KTLKVWDTNTLQTADVFN-FEETVYSHHMSPV 152 (408)
T ss_dssp SEEEEEETTTTEEEEEEE-CSSCEEEEEECSS
T ss_pred CeEEEeeCCCCccceecc-CCCceeeeEeecC
Confidence 677777777544333332 1223455666543
No 328
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=94.69 E-value=0.1 Score=54.95 Aligned_cols=87 Identities=8% Similarity=0.044 Sum_probs=55.8
Q ss_pred EEEeCCCCeEEEEeCCCCcEEEEecCCC---CCceeEEEcCCCCceEEEEeecC-------CCCcEEEEecCCCCc---E
Q psy17325 164 YWLDSRLNRIEVCDENGTNRIVLAKDNI---TQPRGMMLDPSPGTRWLFWTDWG-------ENPRIERIGMDGSNR---S 230 (461)
Q Consensus 164 y~~d~~~~~I~~~~~~G~~~~~l~~~~~---~~p~~ia~d~~~g~~~ly~td~~-------~~~~I~~~~~dG~~~---~ 230 (461)
|+.....+.|.+.+.++.....+....- .....+++.|... +|.++... ....|+..++++... .
T Consensus 29 ~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~--~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~ 106 (719)
T 1z68_A 29 YLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQ--FVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGN 106 (719)
T ss_dssp EEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSS--EEEEEEEEEECSSSCEEEEEEEEETTTTEECCSS
T ss_pred EEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCC--eEEEEecCceeEEeecceEEEEEECCCCccccce
Confidence 3434457889999988877666654221 1267899999866 77766421 125788888876543 2
Q ss_pred EEEecccccceeEEeeccCCeeEEec
Q psy17325 231 TIISTKIYWPNGLTLDIATRRVYFAD 256 (461)
Q Consensus 231 ~i~~~~~~~P~glavD~~~~~ly~~d 256 (461)
.+ . .....+++.+.++.|.++.
T Consensus 107 ~l-~---~~~~~~~~SPDG~~la~~~ 128 (719)
T 1z68_A 107 EL-P---RPIQYLCWSPVGSKLAYVY 128 (719)
T ss_dssp CC-C---SSBCCEEECSSTTCEEEEE
T ss_pred ec-C---cccccceECCCCCEEEEEE
Confidence 22 1 2456788888888887764
No 329
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=94.68 E-value=2.7 Score=38.81 Aligned_cols=99 Identities=4% Similarity=-0.123 Sum_probs=58.5
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCCc----EEEEecCCCCCceeEEEcCCCCce-EEEEeecCCCCcEEEEec-
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN----RIVLAKDNITQPRGMMLDPSPGTR-WLFWTDWGENPRIERIGM- 224 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~----~~~l~~~~~~~p~~ia~d~~~g~~-~ly~td~~~~~~I~~~~~- 224 (461)
+..+++.+.+..|+. -...+.|.+.+++... ...+. ..-.....+++.|. + + +|+... ....|...++
T Consensus 14 v~~~~~s~~~~~l~~-~~~d~~v~iw~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~-~-~~~l~~~~--~dg~i~~wd~~ 87 (342)
T 1yfq_A 14 ISDIKIIPSKSLLLI-TSWDGSLTVYKFDIQAKNVDLLQSL-RYKHPLLCCNFIDN-T-DLQIYVGT--VQGEILKVDLI 87 (342)
T ss_dssp EEEEEEEGGGTEEEE-EETTSEEEEEEEETTTTEEEEEEEE-ECSSCEEEEEEEES-S-SEEEEEEE--TTSCEEEECSS
T ss_pred EEEEEEcCCCCEEEE-EcCCCeEEEEEeCCCCccccceeee-ecCCceEEEEECCC-C-CcEEEEEc--CCCeEEEEEec
Confidence 456677765554544 4456888888876544 33333 22345788999886 4 2 344443 4568888888
Q ss_pred CCCCcEEEEec--ccccceeEEeeccCCeeEEecC
Q psy17325 225 DGSNRSTIIST--KIYWPNGLTLDIATRRVYFADS 257 (461)
Q Consensus 225 dG~~~~~i~~~--~~~~P~glavD~~~~~ly~~d~ 257 (461)
.+.....+ .. .-.....|++.+ .+.|+.+..
T Consensus 88 ~~~~~~~~-~~~~~~~~v~~l~~~~-~~~l~s~~~ 120 (342)
T 1yfq_A 88 GSPSFQAL-TNNEANLGICRICKYG-DDKLIAASW 120 (342)
T ss_dssp SSSSEEEC-BSCCCCSCEEEEEEET-TTEEEEEET
T ss_pred cCCceEec-cccCCCCceEEEEeCC-CCEEEEEcC
Confidence 66544332 22 334567888887 555554443
No 330
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=94.66 E-value=0.015 Score=36.08 Aligned_cols=30 Identities=33% Similarity=0.766 Sum_probs=23.5
Q ss_pred cCcceecCCccc--CceeeccCCccccCCCCee
Q psy17325 70 DMNECEQPGYCS--QMCTNTKGSYICSCNEGYV 100 (461)
Q Consensus 70 d~~eC~~~~~C~--~~C~~~~g~~~C~C~~g~~ 100 (461)
++++|. ...|. ..|.+..++|.|.|++||.
T Consensus 2 d~d~C~-~~pC~ngg~C~~~~~~~~C~C~~G~~ 33 (39)
T 1edm_B 2 DGDQCE-SNPCLNGGSCKDDINSYECWCPFGFE 33 (39)
T ss_dssp CCCTTT-TCCCCTTCEEEEETTEEEEECCTTCC
T ss_pred ccccCC-CCCCCCCCEeEcCCCceEeECCCCCc
Confidence 466775 34565 3799999999999999994
No 331
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=94.66 E-value=4.9 Score=42.85 Aligned_cols=106 Identities=13% Similarity=0.117 Sum_probs=61.2
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecC------CCCCceeEEEcCCCCceEEEEeecCCC----CcE
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD------NITQPRGMMLDPSPGTRWLFWTDWGEN----PRI 219 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~------~~~~p~~ia~d~~~g~~~ly~td~~~~----~~I 219 (461)
+..+|++++....+.|+-...+.|.+.+-.|..=+.+... ......+|++||... +.||++-.... ..|
T Consensus 16 ~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~-~~i~~~~g~~~~~~~~~v 94 (789)
T 1sqj_A 16 YITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNP-DRLYLAQGRYVGDEWAAF 94 (789)
T ss_dssp CEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEE-EEEEEEECSCTTSSCCEE
T ss_pred cEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCC-CEEEEEeCccCCCcccEE
Confidence 5677888876544444444456788888777655544331 113467899998532 26777652222 577
Q ss_pred EEEecCCCCcEEEEec-cc-------ccceeEEeeccC-CeeEEec
Q psy17325 220 ERIGMDGSNRSTIIST-KI-------YWPNGLTLDIAT-RRVYFAD 256 (461)
Q Consensus 220 ~~~~~dG~~~~~i~~~-~~-------~~P~glavD~~~-~~ly~~d 256 (461)
++..-.|...+.+... .. .....|++++.+ ++||...
T Consensus 95 ~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~ 140 (789)
T 1sqj_A 95 YVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGT 140 (789)
T ss_dssp EEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEEC
T ss_pred EEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEe
Confidence 7776667666555321 11 012468998764 4555543
No 332
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=94.48 E-value=3.6 Score=39.52 Aligned_cols=103 Identities=11% Similarity=0.075 Sum_probs=57.7
Q ss_pred ceeeeeeeec-CCeEEEEeCCCC----eEEEEeCCCCcEEEEecC-CC------------CCceeEEEcCC--CCceEEE
Q psy17325 150 LVEGLAYDWI-GGHIYWLDSRLN----RIEVCDENGTNRIVLAKD-NI------------TQPRGMMLDPS--PGTRWLF 209 (461)
Q Consensus 150 ~p~~iavd~~-~~~ly~~d~~~~----~I~~~~~~G~~~~~l~~~-~~------------~~p~~ia~d~~--~g~~~ly 209 (461)
....|++|+. .++||+.-. .+ .|.+.+-.|..-+.+... .+ ....+|++||. .+ .||
T Consensus 56 ~v~~i~~dp~~~~~l~~g~~-~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~--~l~ 132 (394)
T 3b7f_A 56 TIHHIVQDPREPERMLMAAR-TGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPG--TWY 132 (394)
T ss_dssp EEEEEEECSSSTTCEEEEEE-C--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTT--CEE
T ss_pred ceEEEEECCCCCCeEEEEec-CCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCC--EEE
Confidence 4678899873 466776543 23 677776666543333211 11 12446889974 45 788
Q ss_pred EeecCCCCcEEEEecCCCCcEEEEec-c-----------------cccceeEEeecc-CCeeEEecC
Q psy17325 210 WTDWGENPRIERIGMDGSNRSTIIST-K-----------------IYWPNGLTLDIA-TRRVYFADS 257 (461)
Q Consensus 210 ~td~~~~~~I~~~~~dG~~~~~i~~~-~-----------------~~~P~glavD~~-~~~ly~~d~ 257 (461)
... ....|+|..-.|...+.+... . ......|++|+. .++||++..
T Consensus 133 ~g~--~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~ 197 (394)
T 3b7f_A 133 AGT--SPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMS 197 (394)
T ss_dssp EEE--ETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEE
T ss_pred EEe--cCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEEC
Confidence 754 235788877666655544210 0 011246888864 467777643
No 333
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=94.34 E-value=3.3 Score=38.44 Aligned_cols=104 Identities=7% Similarity=-0.005 Sum_probs=64.1
Q ss_pred eeeeeeeecC---CeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCC
Q psy17325 151 VEGLAYDWIG---GHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227 (461)
Q Consensus 151 p~~iavd~~~---~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~ 227 (461)
+..+++.+.. +.++++-..++.|.+.++........+...-.....|++.|..+ .++.+- +....|...++...
T Consensus 72 v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~l~s~-~~dg~i~iwd~~~~ 148 (366)
T 3k26_A 72 FYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP--NLLLSV-SKDHALRLWNIQTD 148 (366)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCT--TEEEEE-ETTSCEEEEETTTT
T ss_pred EEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCC--CEEEEE-eCCCeEEEEEeecC
Confidence 4556666543 45666667788999999775444333444445688999999434 344443 24467888887654
Q ss_pred CcEEEE---ecccccceeEEeeccCCeeEEecC
Q psy17325 228 NRSTII---STKIYWPNGLTLDIATRRVYFADS 257 (461)
Q Consensus 228 ~~~~i~---~~~~~~P~glavD~~~~~ly~~d~ 257 (461)
.....+ ......+..+++++.+..|+.+..
T Consensus 149 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 181 (366)
T 3k26_A 149 TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGM 181 (366)
T ss_dssp EEEEEECSTTSCSSCEEEEEECTTSSEEEEEET
T ss_pred eEEEEecccccccCceeEEEECCCCCEEEEecC
Confidence 333333 223446788999886666665544
No 334
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=94.28 E-value=8.5 Score=42.97 Aligned_cols=220 Identities=9% Similarity=0.028 Sum_probs=111.1
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcE-EEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCc
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR-IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~-~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~ 229 (461)
+..+++.+.+..+..+. .+.|.+.+...... ..+..........+++.|... .++.+. ....|...+++....
T Consensus 801 v~~~~~s~dg~~l~~~~--~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~--~l~~~~--~dg~v~vwd~~~~~~ 874 (1249)
T 3sfz_A 801 VKCCSWSADGDKIIVAA--KNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDH--LAVIAL--SQYCVELWNIDSRLK 874 (1249)
T ss_dssp BCCCCBCTTSSEEEEEE--TTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTT--EEEEEC--SSSCEEEEETTTTEE
T ss_pred EEEEEECCCCCEEEEEc--CCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCC--EEEEEe--CCCeEEEEEcCCCce
Confidence 34566666666666554 47888888665443 333334445678899999866 666554 446787777775443
Q ss_pred EEEEecccccceeEEeeccCCeeEEecCCCceeeecccce---eeeeccce----e----eeEEEEEecCCCCcceeeeE
Q psy17325 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEI---KTNVNYST----I----FRKLYWIDEGGNGVPLKIGK 298 (461)
Q Consensus 230 ~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~---~~~v~~~~----~----~~~~yw~d~~~~~~~~~I~~ 298 (461)
............++++.+.+..|+.+... +.|..-+... ...+.... . ...+.-.+... .+..
T Consensus 875 ~~~~~~h~~~v~~v~~spdg~~l~s~s~d-g~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 948 (1249)
T 3sfz_A 875 VADCRGHLSWVHGVMFSPDGSSFLTASDD-QTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIR-----GLQL 948 (1249)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETT-SCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSS-----SEEE
T ss_pred eeecCCCccceEEEEECCCCCEEEEEeCC-CeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCc-----ceEE
Confidence 33334445567889998866666554433 2322211100 00000000 0 00000001100 0111
Q ss_pred EeCCCCceEEEEeCCeeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecC
Q psy17325 299 ANMDGSNASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIA 378 (461)
Q Consensus 299 ~~~~g~~~~~l~~~~~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~ 378 (461)
....... ...........+++.|.+..+..... .+.|...++............-....++++.+.
T Consensus 949 ~~~~~~~-~~~~~~~~i~~~~~sp~g~~l~~g~~-------------~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d 1014 (1249)
T 3sfz_A 949 IAGKTGQ-IDYLPEAQVSCCCLSPHLEYVAFGDE-------------DGAIKIIELPNNRVFSSGVGHKKAVRHIQFTAD 1014 (1249)
T ss_dssp EEESSCC-EEEECCSCEEEEEECTTSSEEEEEET-------------TSCCEEEETTTTSCEEECCCCSSCCCCEEECSS
T ss_pred EecCcce-EEEcccCcEEEEEEcCCCCEEEEEcC-------------CCCEEEEEcCCCceeeecccCCCceEEEEECCC
Confidence 1111111 11111111667788887766655433 345555555433333333244456778999866
Q ss_pred CCeEEEEcCCCCeEEEEEe
Q psy17325 379 TRRVYFADSKLDFIDFCNY 397 (461)
Q Consensus 379 ~~~ly~~d~~~~~I~~~~~ 397 (461)
+..|..+ ...+.|...++
T Consensus 1015 g~~l~s~-~~dg~i~vwd~ 1032 (1249)
T 3sfz_A 1015 GKTLISS-SEDSVIQVWNW 1032 (1249)
T ss_dssp SSCEEEE-CSSSBEEEEET
T ss_pred CCEEEEE-cCCCEEEEEEC
Confidence 6656555 45678888887
No 335
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.28 E-value=2 Score=38.03 Aligned_cols=101 Identities=14% Similarity=0.141 Sum_probs=70.1
Q ss_pred cCccceeeeeeeecCCeEEEEeCCCCeEEEEeCCC-------CcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCc
Q psy17325 146 SGLDLVEGLAYDWIGGHIYWLDSRLNRIEVCDENG-------TNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPR 218 (461)
Q Consensus 146 ~g~~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G-------~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~ 218 (461)
.|+.....+|+++ ++.||.+ ..+.+.+.+... ...+.|...+...-..+.+|+. | .||.+. +.+
T Consensus 38 ~gw~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~-G--~LYav~---dG~ 108 (236)
T 1tl2_A 38 GGWSNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPN-G--YLYAVS---KDK 108 (236)
T ss_dssp SSCTTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTT-S--CEEEEE---TTE
T ss_pred cccccceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCC-C--CEEEeC---CCE
Confidence 3577888999998 8999999 667899988633 1234454444444678999976 6 699874 379
Q ss_pred EEEEec--CCCCc-----EEEEecccccceeEEeeccCCeeEEec
Q psy17325 219 IERIGM--DGSNR-----STIISTKIYWPNGLTLDIATRRVYFAD 256 (461)
Q Consensus 219 I~~~~~--dG~~~-----~~i~~~~~~~P~glavD~~~~~ly~~d 256 (461)
|+|.+. ++... +.|...+-..-.-|++|+ .+.||-+.
T Consensus 109 iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~ 152 (236)
T 1tl2_A 109 LYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH 152 (236)
T ss_dssp EEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE
T ss_pred EEEeCCCcCCCCceeccccEeccCCCCceEEEEECC-CceEEEEe
Confidence 999887 44332 344443334457789997 78898877
No 336
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=94.25 E-value=8.6 Score=42.92 Aligned_cols=97 Identities=7% Similarity=-0.001 Sum_probs=60.3
Q ss_pred cceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCC
Q psy17325 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228 (461)
Q Consensus 149 ~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~ 228 (461)
.....+++.+.+..| .+-..++.|.+.+.........+...-.....+++.|... +|..+. ....|...++....
T Consensus 616 ~~v~~~~~s~~~~~l-~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~--~l~s~~--~d~~v~vwd~~~~~ 690 (1249)
T 3sfz_A 616 DAVYHACFSQDGQRI-ASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDS--YIATCS--ADKKVKIWDSATGK 690 (1249)
T ss_dssp SCEEEEEECTTSSEE-EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS--EEEEEE--TTSEEEEEETTTCC
T ss_pred ccEEEEEECCCCCEE-EEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCC--EEEEEe--CCCeEEEEECCCCc
Confidence 346677887755555 4445678899999765554444444445688999999866 666554 34578777776544
Q ss_pred cEEEEecccccceeEEeeccCC
Q psy17325 229 RSTIISTKIYWPNGLTLDIATR 250 (461)
Q Consensus 229 ~~~i~~~~~~~P~glavD~~~~ 250 (461)
....+.........+++.+..+
T Consensus 691 ~~~~~~~~~~~v~~~~~~~~~~ 712 (1249)
T 3sfz_A 691 LVHTYDEHSEQVNCCHFTNKSN 712 (1249)
T ss_dssp EEEEEECCSSCEEEEEECSSSS
T ss_pred eEEEEcCCCCcEEEEEEecCCC
Confidence 3333333344566777766433
No 337
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=94.09 E-value=0.021 Score=54.29 Aligned_cols=69 Identities=35% Similarity=0.854 Sum_probs=24.5
Q ss_pred CCCCCCCCCCCCCCCCCcccCCCCCCC--CCceeCCCCceEeCCCCCeecCCCCceecCcceecCCccc--CceeeccCC
Q psy17325 15 KTDCPNGADEGPGCDLAECKHKFGLCS--NTCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCS--QMCTNTKGS 90 (461)
Q Consensus 15 ~~dC~dg~de~~~C~~~~C~~~~~~C~--~~C~~~~~~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~--~~C~~~~g~ 90 (461)
.-.|+.|+- +..|+.+.|. ..|. ..|.. .+.|.|++||. +..|+ +++|. ..|. ..|.. .
T Consensus 198 ~C~C~~G~~-G~~C~~~~C~---~~C~~~G~C~~---~~~C~C~~G~~----G~~C~-~~~C~--~~C~~~g~C~~---~ 260 (324)
T 2ygq_A 198 FCICPPGFY-GVNCDKANCS---TTCFNGGTCFY---PGKCICPPGLE----GEQCE-ISKCP--QPCRNGGKCIG---K 260 (324)
T ss_dssp CEECCTTCB-TTTTCBCCCS---SCCCSSCCBSC---SSCBCCCTTCC----TTTTC-----------------------
T ss_pred EEeCCCCcc-CCCcccCcCC---CCCCCCCeeCC---CCeeeCCCCcc----CCCCC-cCcCC--CcCCCCCEECC---C
Confidence 345777764 3567655564 1343 24543 25677777774 44564 34442 2232 13432 3
Q ss_pred ccccCCCCee
Q psy17325 91 YICSCNEGYV 100 (461)
Q Consensus 91 ~~C~C~~g~~ 100 (461)
+.|.|++||.
T Consensus 261 ~~C~C~~G~~ 270 (324)
T 2ygq_A 261 SKCKCSKGYQ 270 (324)
T ss_dssp ----------
T ss_pred CEEECCCCCc
Confidence 5677777764
No 338
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=94.01 E-value=0.057 Score=41.11 Aligned_cols=56 Identities=21% Similarity=0.345 Sum_probs=45.1
Q ss_pred Ccee-CCCCceEeCCCCCeecCCCCceecCcc-ee-cCCcccC--ceeecc-CCccccCCCCee
Q psy17325 43 TCHP-TPLGALCTCPPGEILSNDSVTCQDMNE-CE-QPGYCSQ--MCTNTK-GSYICSCNEGYV 100 (461)
Q Consensus 43 ~C~~-~~~~~~C~C~~G~~l~~~~~~C~d~~e-C~-~~~~C~~--~C~~~~-g~~~C~C~~g~~ 100 (461)
.|.. .++...|.|..||.. ++..|..++. |. .+++|+. .|.... ....|.|..+|.
T Consensus 23 ~C~r~~~G~e~CrCl~gY~~--dg~~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~ 84 (105)
T 1n1i_A 23 ACYRYLDGTEEWRCLLGFKE--VGGKCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKEGS 84 (105)
T ss_dssp EEEECTTSCEEEEECTTEEE--CSSSEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTC
T ss_pred CeEECCCCCEeEEEECCeec--cCCEEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCCC
Confidence 4766 678889999999985 7889998888 76 6778964 888774 778899998863
No 339
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=93.95 E-value=7.6 Score=41.19 Aligned_cols=105 Identities=10% Similarity=0.094 Sum_probs=63.6
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEec-C----------CCCCceeEEEcCCC-CceEEEEeec----
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK-D----------NITQPRGMMLDPSP-GTRWLFWTDW---- 213 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~-~----------~~~~p~~ia~d~~~-g~~~ly~td~---- 213 (461)
+..+|++++...+++|+-...+.|.+..-.|+.=+.+.. . .......|++||.. + .||.+..
T Consensus 22 ~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~--~~~~~~g~~~~ 99 (763)
T 3a0f_A 22 FISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPD--RLYLAQGDYVQ 99 (763)
T ss_dssp CEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTT--CEEEEECSCTT
T ss_pred ceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCC--EEEEEeccccc
Confidence 567888988775555554555778888777766444433 1 22346789999853 4 6887652
Q ss_pred -CCCCcEEEEecCCCCcEEEEec-cc-----ccc--eeEEeeccC-CeeEEec
Q psy17325 214 -GENPRIERIGMDGSNRSTIIST-KI-----YWP--NGLTLDIAT-RRVYFAD 256 (461)
Q Consensus 214 -~~~~~I~~~~~dG~~~~~i~~~-~~-----~~P--~glavD~~~-~~ly~~d 256 (461)
+....|+|..=.|...+.+... .. ... ..|++++.+ +.||...
T Consensus 100 ~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~ 152 (763)
T 3a0f_A 100 WDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGS 152 (763)
T ss_dssp TCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEEC
T ss_pred CCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEe
Confidence 1236777776667666655432 11 111 358898764 5666654
No 340
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.88 E-value=6.5 Score=41.50 Aligned_cols=94 Identities=13% Similarity=0.115 Sum_probs=55.2
Q ss_pred eeeeeeeecC-CeEEEEeCCCCeEEEEeCCCCc--EEEEecCCCCCceeEEEcCC--CCceEEEEeecCCCCcEEEEecC
Q psy17325 151 VEGLAYDWIG-GHIYWLDSRLNRIEVCDENGTN--RIVLAKDNITQPRGMMLDPS--PGTRWLFWTDWGENPRIERIGMD 225 (461)
Q Consensus 151 p~~iavd~~~-~~ly~~d~~~~~I~~~~~~G~~--~~~l~~~~~~~p~~ia~d~~--~g~~~ly~td~~~~~~I~~~~~d 225 (461)
+..+++.+.. ++..++-..++.|.+.++++.. ..............+++.|. .. .++.+. ....|...++.
T Consensus 56 V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~--~l~sgs--~dg~I~vwdl~ 131 (753)
T 3jro_A 56 VWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGP--LLLVAS--SDGKVSVVEFK 131 (753)
T ss_dssp EEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCS--EEEEEE--TTSEEEEEECC
T ss_pred eEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCC--EEEEEe--CCCcEEEEEee
Confidence 4456665432 5566666678899999987664 22223333356788999987 44 555444 44677777776
Q ss_pred CCC--cEEEEecccccceeEEeecc
Q psy17325 226 GSN--RSTIISTKIYWPNGLTLDIA 248 (461)
Q Consensus 226 G~~--~~~i~~~~~~~P~glavD~~ 248 (461)
... ..............+++.+.
T Consensus 132 ~~~~~~~~~~~~~~~~v~~l~~~p~ 156 (753)
T 3jro_A 132 ENGTTSPIIIDAHAIGVNSASWAPA 156 (753)
T ss_dssp SSSCCCCEEEECCSSCEEEEEECCC
T ss_pred cCCCcceeEeecCCCceEEEEecCc
Confidence 442 22223333345667777763
No 341
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=93.86 E-value=3.9 Score=37.59 Aligned_cols=196 Identities=15% Similarity=0.052 Sum_probs=103.8
Q ss_pred cceeeeeeeecCC-eEEEEeCCCCeEEEEeC-CCCcEEEEecC-CCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecC
Q psy17325 149 DLVEGLAYDWIGG-HIYWLDSRLNRIEVCDE-NGTNRIVLAKD-NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD 225 (461)
Q Consensus 149 ~~p~~iavd~~~~-~ly~~d~~~~~I~~~~~-~G~~~~~l~~~-~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~d 225 (461)
..+..+++.+.+. .|+ +-...+.|.+.++ .+.....+... .-.....|++.| .+ .|+.+. ....|...++.
T Consensus 57 ~~v~~~~~~~~~~~~l~-~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~--~l~s~~--~d~~i~iwd~~ 130 (342)
T 1yfq_A 57 HPLLCCNFIDNTDLQIY-VGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DD--KLIAAS--WDGLIEVIDPR 130 (342)
T ss_dssp SCEEEEEEEESSSEEEE-EEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TT--EEEEEE--TTSEEEEECHH
T ss_pred CceEEEEECCCCCcEEE-EEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CC--EEEEEc--CCCeEEEEccc
Confidence 3466778876555 454 4445789999998 77665444320 335578899998 55 555544 34567666654
Q ss_pred C---------CCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceee
Q psy17325 226 G---------SNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKI 296 (461)
Q Consensus 226 G---------~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I 296 (461)
. ......+. .-..+..+++.+. .|+.+.... .|
T Consensus 131 ~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~--~l~~~~~d~-----------------------------------~i 172 (342)
T 1yfq_A 131 NYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSS--RLIVGMNNS-----------------------------------QV 172 (342)
T ss_dssp HHTTBCEEEEESCSSSSS-SCCCEEEEEECSS--EEEEEESTT-----------------------------------EE
T ss_pred ccccccccccCCeeeEEe-eCCceEEEEecCC--cEEEEeCCC-----------------------------------eE
Confidence 2 11100011 1234566666643 255443322 34
Q ss_pred eEEeCCC-Cc--eEEEEeC-Ce-eeeEEEec-cCCeEEEeecCceeeEEEeecCCCCceEEEeecC-------CCeEEEe
Q psy17325 297 GKANMDG-SN--ASILVSG-QL-YEALALDL-ENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG-------SNRSTII 363 (461)
Q Consensus 297 ~~~~~~g-~~--~~~l~~~-~~-p~~iavd~-~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG-------~~~~~l~ 363 (461)
...++.. .. ....... .. +..+++.| .+..|+.+.. .+.|...+++. .....+.
T Consensus 173 ~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~-------------dg~i~i~~~~~~~~~~~~~~~~~~~ 239 (342)
T 1yfq_A 173 QWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSI-------------DGRVAVEFFDDQGDDYNSSKRFAFR 239 (342)
T ss_dssp EEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEET-------------TSEEEEEECCTTCCSTTCTTCEEEE
T ss_pred EEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEec-------------CCcEEEEEEcCCCcccccccceeee
Confidence 5555544 21 1222211 11 78888888 6655554433 23343333322 2222332
Q ss_pred eCC--------CCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCe
Q psy17325 364 STK--------IYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQ 403 (461)
Q Consensus 364 ~~~--------l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~ 403 (461)
... ......+++.+.+..|+.+. ..+.|...++. ++..
T Consensus 240 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~vwd~~-~~~~ 285 (342)
T 1yfq_A 240 CHRLNLKDTNLAYPVNSIEFSPRHKFLYTAG-SDGIISCWNLQ-TRKK 285 (342)
T ss_dssp CCCCCTTCCSSCCCEEEEEECTTTCCEEEEE-TTSCEEEEETT-TTEE
T ss_pred cccccccccccceeEEEEEEcCCCCEEEEec-CCceEEEEcCc-cHhH
Confidence 111 22677899987666666554 46788888882 3443
No 342
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=93.81 E-value=4.7 Score=38.31 Aligned_cols=193 Identities=9% Similarity=-0.045 Sum_probs=102.0
Q ss_pred eeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEec-----CCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCC
Q psy17325 153 GLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK-----DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227 (461)
Q Consensus 153 ~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~-----~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~ 227 (461)
.+++.+..+...++-+.++.|.+.++........+. ........+++.+..+ .++.+- +....|...++...
T Consensus 162 ~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--~~l~sg-s~D~~v~~wd~~~~ 238 (380)
T 3iz6_a 162 SCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNA--NMFISG-SCDTTVRLWDLRIT 238 (380)
T ss_dssp CCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSC--CEEEEE-ETTSCEEEEETTTT
T ss_pred EEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCC--CEEEEE-ECCCeEEEEECCCC
Confidence 344444445566777788899999976555443332 2223456788877656 666665 44567777776522
Q ss_pred -CcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCce
Q psy17325 228 -NRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNA 306 (461)
Q Consensus 228 -~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~ 306 (461)
.....+.........+++.+.+..|.-+ ...+ .|...++.....
T Consensus 239 ~~~~~~~~~h~~~v~~v~~~p~~~~l~s~-s~D~----------------------------------~i~lwd~~~~~~ 283 (380)
T 3iz6_a 239 SRAVRTYHGHEGDINSVKFFPDGQRFGTG-SDDG----------------------------------TCRLFDMRTGHQ 283 (380)
T ss_dssp CCCCEEECCCSSCCCEEEECTTSSEEEEE-CSSS----------------------------------CEEEEETTTTEE
T ss_pred CcceEEECCcCCCeEEEEEecCCCeEEEE-cCCC----------------------------------eEEEEECCCCcE
Confidence 2222233333457789998765554433 3332 244444433222
Q ss_pred EEEEeCC-------e--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecC-CCeEEEe---eCCCCCceeE
Q psy17325 307 SILVSGQ-------L--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDG-SNRSTII---STKIYWPNGL 373 (461)
Q Consensus 307 ~~l~~~~-------~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG-~~~~~l~---~~~l~~p~gl 373 (461)
...+... . ...+++.|.+..|+-... .+.|...++.. .....+. ...-.....|
T Consensus 284 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~-------------dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l 350 (380)
T 3iz6_a 284 LQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYS-------------NGDCYVWDTLLAEMVLNLGTLQNSHEGRISCL 350 (380)
T ss_dssp EEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECT-------------TSCEEEEETTTCCEEEEECCSCSSCCCCCCEE
T ss_pred EEEecccccccccccCceEEEEECCCCCEEEEEEC-------------CCCEEEEECCCCceEEEEecccCCCCCceEEE
Confidence 2222111 1 467888887665554322 33444444322 2222221 1223456788
Q ss_pred EEecCCCeEEEEcCCCCeEEEEEe
Q psy17325 374 TLDIATRRVYFADSKLDFIDFCNY 397 (461)
Q Consensus 374 aiD~~~~~ly~~d~~~~~I~~~~~ 397 (461)
++.+++..| ++-...+.|..-++
T Consensus 351 ~~s~dg~~l-~sgs~D~~i~iW~~ 373 (380)
T 3iz6_a 351 GLSSDGSAL-CTGSWDKNLKIWAF 373 (380)
T ss_dssp EECSSSSEE-EEECTTSCEEEEEC
T ss_pred EECCCCCEE-EEeeCCCCEEEEec
Confidence 998655544 44455567777776
No 343
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=93.63 E-value=0.017 Score=39.98 Aligned_cols=33 Identities=33% Similarity=0.872 Sum_probs=26.7
Q ss_pred ceecCcceecCCccc----CceeeccCCccccCCCCee
Q psy17325 67 TCQDMNECEQPGYCS----QMCTNTKGSYICSCNEGYV 100 (461)
Q Consensus 67 ~C~d~~eC~~~~~C~----~~C~~~~g~~~C~C~~g~~ 100 (461)
.|+++++|.. .+|. ..|.+..++|.|.|++||.
T Consensus 7 ~~~~~d~C~s-nPC~nga~gtC~~~~g~y~C~C~~Gy~ 43 (61)
T 2k2s_B 7 LSETPAACSS-NPCGPEAAGTCKETNSGYICRCNQGYR 43 (61)
T ss_dssp CTTSCCHHHH-CSSCSSSCCEEEECSSEEEEECCTTEE
T ss_pred hcCCCCcCcC-CCCcCCCccccccCCCceEeECCCCCc
Confidence 4677888863 4574 3799999999999999997
No 344
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=93.58 E-value=4.8 Score=42.64 Aligned_cols=151 Identities=9% Similarity=0.049 Sum_probs=85.3
Q ss_pred EEEEeecCC---CCcEEEEec---CCC--CcEEEEeccc-------ccceeEEee-ccCCeeEEecCCCceeeeccccee
Q psy17325 207 WLFWTDWGE---NPRIERIGM---DGS--NRSTIISTKI-------YWPNGLTLD-IATRRVYFADSKLDFIDCKSLEIK 270 (461)
Q Consensus 207 ~ly~td~~~---~~~I~~~~~---dG~--~~~~i~~~~~-------~~P~glavD-~~~~~ly~~d~~~~~i~~~~~~~~ 270 (461)
++||+-... .+.++|... +|. ..++++..+. ..-.+.++. +.+++|.|+....+.-.
T Consensus 128 ~~yy~~~~~g~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~------- 200 (751)
T 2xe4_A 128 YRYYTREVKGKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAFCDVMEVKPAPPEHDLVAFSVDMSGNEV------- 200 (751)
T ss_dssp EEEEEEECTTCCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSCCEEEEEEECTTTTCEEEEEEESSSSSC-------
T ss_pred EEEEEEECCCCceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCeEEEeeeEecCCCCCEEEEEEeCCCCce-------
Confidence 888875322 246788876 665 5666665421 134567888 77777766544321100
Q ss_pred eeeccceeeeEEEEEecCCCCcceeeeEEeCCCC-ceEEEEeCCe---eeeEEEeccCCeEEEeecCceeeEEEeecCCC
Q psy17325 271 TNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS-NASILVSGQL---YEALALDLENGMLYYSTLKCTRWLFWTDWGEN 346 (461)
Q Consensus 271 ~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~-~~~~l~~~~~---p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~ 346 (461)
..|++.++++. .. +...+ ..+++..|.++.||++... +.+..
T Consensus 201 -----------------------~~l~v~dl~~g~~~---l~~~~~~~~~~~~WspDg~~l~y~~~d--------~~~~~ 246 (751)
T 2xe4_A 201 -----------------------YTIEFKRISDPSQT---IADKVSGTNGEIVWGPDHTSLFYVTKD--------ETLRE 246 (751)
T ss_dssp -----------------------EEEEEEETTCTTCC---CCCCEEEECSCCEECSSTTEEEEEEEC--------TTCCE
T ss_pred -----------------------EEEEEEECCCCCEe---CCccccCceeeEEEecCCCEEEEEEEC--------CCCCC
Confidence 24788888776 41 11111 3456666666666655321 00112
Q ss_pred CceEEEeecCCCe--EEEee-CCCCCceeEEEecCCCeEEEEcC--CCCeEEEEEec
Q psy17325 347 PRIERIGMDGSNR--STIIS-TKIYWPNGLTLDIATRRVYFADS--KLDFIDFCNYD 398 (461)
Q Consensus 347 ~~I~~~~~dG~~~--~~l~~-~~l~~p~glaiD~~~~~ly~~d~--~~~~I~~~~~~ 398 (461)
.+|++.++++... ..+.. ..-..-.++++.++++.|+++-. ....|+.++++
T Consensus 247 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~ 303 (751)
T 2xe4_A 247 NKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLR 303 (751)
T ss_dssp EEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESS
T ss_pred CEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 4788888877542 23332 22223456778878888888643 34578888884
No 345
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=93.53 E-value=0.046 Score=53.94 Aligned_cols=50 Identities=34% Similarity=0.892 Sum_probs=33.4
Q ss_pred CceeCCCCceEeCCCCCeecCCCCceecC-----------cceecCCcccC--ceeeccCCccccCCCCee
Q psy17325 43 TCHPTPLGALCTCPPGEILSNDSVTCQDM-----------NECEQPGYCSQ--MCTNTKGSYICSCNEGYV 100 (461)
Q Consensus 43 ~C~~~~~~~~C~C~~G~~l~~~~~~C~d~-----------~eC~~~~~C~~--~C~~~~g~~~C~C~~g~~ 100 (461)
.|.+ ..+.|.|++||. +..|+.. ++|...+.|.. .| ..+++.|.|++||.
T Consensus 210 ~C~~--~~g~C~C~~G~~----G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C--~~~~~~C~C~~G~~ 272 (423)
T 2gy5_A 210 VCHE--DTGECICPPGFM----GRTCEKACELHTFGRTCKERCSGQEGCKSYVFC--LPDPYGCSCATGWK 272 (423)
T ss_dssp EECT--TTCCEECCTTEE----STTSCEECCTTEESTTSCEECCSTTTTTTCCEE--ETTTTEEECCBTCB
T ss_pred EEEC--CCCcEeCCCCcc----CCCcccccCCCCCCCCcCccCCCCCCCCCCCEE--CCCCCeEEeCCCcc
Confidence 4654 467999999996 5566531 24443445543 44 35788999999995
No 346
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=93.45 E-value=0.021 Score=37.02 Aligned_cols=26 Identities=27% Similarity=0.653 Sum_probs=18.8
Q ss_pred CCC-CceeCC--CCceEeCCCCCeecCCCCcee
Q psy17325 40 CSN-TCHPTP--LGALCTCPPGEILSNDSVTCQ 69 (461)
Q Consensus 40 C~~-~C~~~~--~~~~C~C~~G~~l~~~~~~C~ 69 (461)
|.+ .|.... ++|.|.|++||. |..|+
T Consensus 14 C~nG~C~~~~~~~~~~C~C~~Gyt----G~~Ce 42 (46)
T 1k36_A 14 CLHGQCIYLVDMSQNYCRCEVGYT----GVRCE 42 (46)
T ss_dssp CSSEEEEEETTTTEEEEEECTTCS----STTSC
T ss_pred CCCCEeeccCCCCCEEEECCCCCc----cCCCC
Confidence 443 687644 679999999995 56675
No 347
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=93.45 E-value=9.2 Score=40.55 Aligned_cols=223 Identities=8% Similarity=0.033 Sum_probs=116.2
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecC--------CCCCceeEEEcCCCCceE-EEEeecCCCCcEEE
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD--------NITQPRGMMLDPSPGTRW-LFWTDWGENPRIER 221 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~--------~~~~p~~ia~d~~~g~~~-ly~td~~~~~~I~~ 221 (461)
+.+++.|. .++|++. +..+.|.+.+............ ......+|+.|+. | . ||+.. ....|.+
T Consensus 359 V~~i~~d~-~g~lWiG-t~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~-g--~~lWigt--~~~Gl~~ 431 (795)
T 4a2l_A 359 VSCIVEDK-DKNLWIG-TNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEK-K--SLVYIGT--HAGGLSI 431 (795)
T ss_dssp EEEEEECT-TSCEEEE-ESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETT-T--TEEEEEE--TTTEEEE
T ss_pred eEEEEECC-CCCEEEE-ECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCC-C--CEEEEEe--CcCceeE
Confidence 45566663 4566554 3345688887765443333211 1234678888875 4 5 66654 2247888
Q ss_pred EecCCCCcEEEEec----ccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeee
Q psy17325 222 IGMDGSNRSTIIST----KIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIG 297 (461)
Q Consensus 222 ~~~dG~~~~~i~~~----~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~ 297 (461)
.+......+.+... .......|+.|. .++|+++.. .+ +.
T Consensus 432 ~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~lwigt~-~G-----------------------------------l~ 474 (795)
T 4a2l_A 432 LHRNSGQVENFNQRNSQLVNENVYAILPDG-EGNLWLGTL-SA-----------------------------------LV 474 (795)
T ss_dssp EETTTCCEEEECTTTSCCSCSCEEEEEECS-SSCEEEEES-SC-----------------------------------EE
T ss_pred EeCCCCcEEEeecCCCCcCCCeeEEEEECC-CCCEEEEec-Cc-----------------------------------ee
Confidence 88775444333211 112456777775 567776654 21 44
Q ss_pred EEeCCCCceEEEEeC----C----eeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEee----C
Q psy17325 298 KANMDGSNASILVSG----Q----LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIIS----T 365 (461)
Q Consensus 298 ~~~~~g~~~~~l~~~----~----~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~----~ 365 (461)
+.+++....+.+... . ....|..|. .|.||++... .|.+.+.+.... .+.. .
T Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWigt~~--------------Gl~~~~~~~~~~-~~~~~~~~~ 538 (795)
T 4a2l_A 475 RFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDS-HKRLWIGGEE--------------GLSVFKQEGLDI-QKASILPVS 538 (795)
T ss_dssp EEETTTTEEEECCBCTTCCBCCCCCEEEEEECT-TCCEEEEESS--------------CEEEEEEETTEE-EECCCSCSC
T ss_pred EEeCCCCeEEEccccccccccCCceEEEEEECC-CCCEEEEeCC--------------ceEEEeCCCCeE-EEecCCCCC
Confidence 444443322222211 1 167788884 6677776543 355555443322 2110 1
Q ss_pred CC--CCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeee-CCEEEEEeCC
Q psy17325 366 KI--YWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLE-NGMLYYSTEG 442 (461)
Q Consensus 366 ~l--~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~lYwtd~~ 442 (461)
.+ ....+|+.| .+++||++-.+ -|.+++. ...... ......++.. ....+|..+ +|.||++. .
T Consensus 539 ~l~~~~i~~i~~d-~~g~lWigT~~--Gl~~~d~--~~~~~~-~~~~~~gl~~-------~~i~~i~~d~~g~lWi~t-~ 604 (795)
T 4a2l_A 539 NVTKLFTNCIYEA-SNGIIWVGTRE--GFYCFNE--KDKQIK-RYNTTNGLPN-------NVVYGILEDSFGRLWLST-N 604 (795)
T ss_dssp GGGGSCEEEEEEC-TTSCEEEEESS--CEEEEET--TTTEEE-EECGGGTCSC-------SCEEEEEECTTSCEEEEE-T
T ss_pred CCCCCeeEEEEEC-CCCCEEEEeCC--CceeECC--CCCcEE-EeCCCCCCch-------hheEEEEECCCCCEEEEc-C
Confidence 11 245678888 67888887553 5888887 333322 2232333321 123566665 56787765 3
Q ss_pred Cceee
Q psy17325 443 AEFLK 447 (461)
Q Consensus 443 ~~~i~ 447 (461)
.+..+
T Consensus 605 ~Gl~~ 609 (795)
T 4a2l_A 605 RGISC 609 (795)
T ss_dssp TEEEE
T ss_pred CceEE
Confidence 44443
No 348
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=93.39 E-value=5.8 Score=38.04 Aligned_cols=102 Identities=15% Similarity=0.095 Sum_probs=58.5
Q ss_pred ceeeeeeeec--CCeEEEEeCCCCeEEEEeCCCCcEEEEecC------------------CCCCceeEEEcCC-CCceEE
Q psy17325 150 LVEGLAYDWI--GGHIYWLDSRLNRIEVCDENGTNRIVLAKD------------------NITQPRGMMLDPS-PGTRWL 208 (461)
Q Consensus 150 ~p~~iavd~~--~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~------------------~~~~p~~ia~d~~-~g~~~l 208 (461)
...+|++|+. .+.||..-. .+.|.+.+-.|..-+.+... .......|++||. .+ .|
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~-~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~--~l 192 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTS-PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPK--HL 192 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEE-TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTT--CE
T ss_pred ceeEEEeCCCCCCCEEEEEec-CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCC--EE
Confidence 3456888864 577776532 46788887777654443210 0112358999985 34 68
Q ss_pred EEeecCCCCcEEEEecCCCCcEEEEec--c--c--------ccceeEEeeccC-CeeEEec
Q psy17325 209 FWTDWGENPRIERIGMDGSNRSTIIST--K--I--------YWPNGLTLDIAT-RRVYFAD 256 (461)
Q Consensus 209 y~td~~~~~~I~~~~~dG~~~~~i~~~--~--~--------~~P~glavD~~~-~~ly~~d 256 (461)
|+... ...|++..-.|...+.+... . + .....|++|+.+ +.||+..
T Consensus 193 ~vg~~--~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~ 251 (394)
T 3b7f_A 193 YIGMS--SGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN 251 (394)
T ss_dssp EEEEE--TBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE
T ss_pred EEEEC--CCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc
Confidence 87641 24687776666655544221 0 0 124678888753 5666654
No 349
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=93.35 E-value=0.038 Score=37.00 Aligned_cols=36 Identities=33% Similarity=0.953 Sum_probs=26.0
Q ss_pred cCcceecC--CcccC--cee--eccCCccccCCCCeeeeCCCCcee
Q psy17325 70 DMNECEQP--GYCSQ--MCT--NTKGSYICSCNEGYVLEYDNHTCK 109 (461)
Q Consensus 70 d~~eC~~~--~~C~~--~C~--~~~g~~~C~C~~g~~l~~~~~~C~ 109 (461)
++++|... ..|.+ .|. +..++|.|.|++||. +..|.
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce 43 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYS----GDRCQ 43 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCC----SSSSC
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCc----CCcCC
Confidence 45677532 36753 788 788999999999994 56674
No 350
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=93.12 E-value=0.075 Score=40.20 Aligned_cols=56 Identities=20% Similarity=0.482 Sum_probs=42.9
Q ss_pred Ccee-CCCCceEeCCCCCeecCCCCceecC--ccee-cCCcccC--ceeecc-----CCccccCCCCee
Q psy17325 43 TCHP-TPLGALCTCPPGEILSNDSVTCQDM--NECE-QPGYCSQ--MCTNTK-----GSYICSCNEGYV 100 (461)
Q Consensus 43 ~C~~-~~~~~~C~C~~G~~l~~~~~~C~d~--~eC~-~~~~C~~--~C~~~~-----g~~~C~C~~g~~ 100 (461)
.|.. .++...|.|.+||.. ++..|..+ ..|. .+++|+. .|.... +...|.|.+||.
T Consensus 17 ~C~r~~~g~e~C~C~~gy~g--dg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 17 GCFRHLDEREECKCLLNYKQ--EGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS 83 (99)
T ss_dssp EEECCTTSCCEEEECTTEEE--ETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred CeEEcCCCCEEEEecCCeec--CCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence 3555 567889999999985 67889877 5787 4578964 787764 568899999863
No 351
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=92.91 E-value=6 Score=36.86 Aligned_cols=94 Identities=5% Similarity=-0.034 Sum_probs=54.7
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCc-------EEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEE
Q psy17325 160 GGHIYWLDSRLNRIEVCDENGTN-------RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTI 232 (461)
Q Consensus 160 ~~~ly~~d~~~~~I~~~~~~G~~-------~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i 232 (461)
.+.+.++-..++.|.+.++.... ....+.+.......+++.|... +|+-+. ....|...++........
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~--~l~s~s--~D~~v~lwd~~~~~~~~~ 113 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENC--FAISSS--WDKTLRLWDLRTGTTYKR 113 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTT--EEEEEE--TTSEEEEEETTSSCEEEE
T ss_pred CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCC--EEEEEc--CCCcEEEEECCCCcEEEE
Confidence 45666677777888888765321 1122333334577899998755 555443 345777777654332222
Q ss_pred EecccccceeEEeeccCCeeEEecC
Q psy17325 233 ISTKIYWPNGLTLDIATRRVYFADS 257 (461)
Q Consensus 233 ~~~~~~~P~glavD~~~~~ly~~d~ 257 (461)
+.........+++.+.++.|+-+..
T Consensus 114 ~~~h~~~v~~v~~sp~~~~l~s~~~ 138 (343)
T 2xzm_R 114 FVGHQSEVYSVAFSPDNRQILSAGA 138 (343)
T ss_dssp EECCCSCEEEEEECSSTTEEEEEET
T ss_pred EcCCCCcEEEEEECCCCCEEEEEcC
Confidence 2333345678899887766665543
No 352
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=92.72 E-value=6.6 Score=36.89 Aligned_cols=195 Identities=10% Similarity=-0.034 Sum_probs=101.6
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCC-
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN- 228 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~- 228 (461)
.+..+++.+. +...++-..++.|.+.+.........+.........+++.|... .|... +....|....+....
T Consensus 66 ~V~~~~~s~d-~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~--~lasg--~~d~~i~v~~~~~~~~ 140 (354)
T 2pbi_B 66 KVLCMDWCKD-KRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGC--AIACG--GLDNKCSVYPLTFDKN 140 (354)
T ss_dssp CEEEEEECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSS--EEEEE--STTSEEEEEECCCCTT
T ss_pred eEEEEEECCC-CCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCC--EEEEe--eCCCCEEEEEEecccc
Confidence 3556666654 44555666788999998655444333333334577899999755 44433 334455555443211
Q ss_pred -----cEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCC
Q psy17325 229 -----RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG 303 (461)
Q Consensus 229 -----~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g 303 (461)
....+.........+++.+.+..|+-+.... .|...++..
T Consensus 141 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~-----------------------------------~v~lwd~~~ 185 (354)
T 2pbi_B 141 ENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDG-----------------------------------TCALWDVES 185 (354)
T ss_dssp CCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTS-----------------------------------EEEEEETTT
T ss_pred ccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCC-----------------------------------cEEEEeCCC
Confidence 1111222233456677776555555443322 344455443
Q ss_pred Cce-EEEEeCCe-eeeEEEecc-CCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCC
Q psy17325 304 SNA-SILVSGQL-YEALALDLE-NGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATR 380 (461)
Q Consensus 304 ~~~-~~l~~~~~-p~~iavd~~-~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~ 380 (461)
... ..+..... ...+++.|. .+.++++-.. .+.|...++........+...-....++++.+.+.
T Consensus 186 ~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~------------Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~ 253 (354)
T 2pbi_B 186 GQLLQSFHGHGADVLCLDLAPSETGNTFVSGGC------------DKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGD 253 (354)
T ss_dssp CCEEEEEECCSSCEEEEEECCCSSCCEEEEEET------------TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS
T ss_pred CeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeC------------CCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCC
Confidence 332 22222122 566777664 2444444433 34555555533322222223445677889986555
Q ss_pred eEEEEcCCCCeEEEEEe
Q psy17325 381 RVYFADSKLDFIDFCNY 397 (461)
Q Consensus 381 ~ly~~d~~~~~I~~~~~ 397 (461)
.|..+ ...+.|...++
T Consensus 254 ~l~s~-s~D~~v~lwd~ 269 (354)
T 2pbi_B 254 AFASG-SDDATCRLYDL 269 (354)
T ss_dssp EEEEE-ETTSCEEEEET
T ss_pred EEEEE-eCCCeEEEEEC
Confidence 54444 45678888888
No 353
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=92.72 E-value=0.039 Score=37.22 Aligned_cols=36 Identities=22% Similarity=0.695 Sum_probs=24.4
Q ss_pred ecCcceecCCccc--Ccee-----eccCCccccCCCCeeeeCCCCcee
Q psy17325 69 QDMNECEQPGYCS--QMCT-----NTKGSYICSCNEGYVLEYDNHTCK 109 (461)
Q Consensus 69 ~d~~eC~~~~~C~--~~C~-----~~~g~~~C~C~~g~~l~~~~~~C~ 109 (461)
.+++||. ..+|. ..|. +..++|.|.|++||. +..|.
T Consensus 6 ~~~~eC~-s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~----G~~CE 48 (55)
T 3u7u_G 6 VKCAEKE-KTFCVNGGECFMVKDLSNPSRYLCKCPNEFT----GDRCQ 48 (55)
T ss_dssp EECCSTT-TTTSCTTCEEEEECCC--CCCEEEEECTTEE----STTSC
T ss_pred ccCCCCc-CCCCCCCCCcCCCCccCCCCCEeEeCCCCCc----CCCcC
Confidence 3578885 44664 3773 566899999999995 66673
No 354
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=92.71 E-value=6.6 Score=36.88 Aligned_cols=182 Identities=10% Similarity=0.031 Sum_probs=96.5
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCC-CceEEEEeecCCCCcEEEEecCCCCc
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSP-GTRWLFWTDWGENPRIERIGMDGSNR 229 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~-g~~~ly~td~~~~~~I~~~~~dG~~~ 229 (461)
...+++.+.+. ..++-+.++.|.+.++........+...-.....+++.|.. | .++++- +....|...++.....
T Consensus 157 v~~~~~~~~~~-~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g--~~l~sg-s~Dg~v~~wd~~~~~~ 232 (354)
T 2pbi_B 157 LSACSFTNSDM-QILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETG--NTFVSG-GCDKKAMVWDMRSGQC 232 (354)
T ss_dssp EEEEEECSSSS-EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSC--CEEEEE-ETTSCEEEEETTTCCE
T ss_pred EEEEEEeCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCC--CEEEEE-eCCCeEEEEECCCCcE
Confidence 44566654443 44455667899999976544433333333446678887652 3 344444 3456788777764433
Q ss_pred EEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEE
Q psy17325 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASIL 309 (461)
Q Consensus 230 ~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l 309 (461)
...+.........+++.+.+..|.-+.... .|...++.......+
T Consensus 233 ~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~-----------------------------------~v~lwd~~~~~~~~~ 277 (354)
T 2pbi_B 233 VQAFETHESDVNSVRYYPSGDAFASGSDDA-----------------------------------TCRLYDLRADREVAI 277 (354)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTS-----------------------------------CEEEEETTTTEEEEE
T ss_pred EEEecCCCCCeEEEEEeCCCCEEEEEeCCC-----------------------------------eEEEEECCCCcEEEE
Confidence 333333334567888987665554443322 344444443332222
Q ss_pred EeCC-e---eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEee-cCCCeEEEeeCCCCCceeEEEecCCCeEEE
Q psy17325 310 VSGQ-L---YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGM-DGSNRSTIISTKIYWPNGLTLDIATRRVYF 384 (461)
Q Consensus 310 ~~~~-~---p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~-dG~~~~~l~~~~l~~p~glaiD~~~~~ly~ 384 (461)
+... . ...+++.|.+..|+.... .+.|...++ .|.....+. ..-.....|++.+++..|..
T Consensus 278 ~~~~~~~~~~~~~~~s~~g~~l~~g~~-------------d~~i~vwd~~~~~~~~~l~-~h~~~v~~l~~spdg~~l~s 343 (354)
T 2pbi_B 278 YSKESIIFGASSVDFSLSGRLLFAGYN-------------DYTINVWDVLKGSRVSILF-GHENRVSTLRVSPDGTAFCS 343 (354)
T ss_dssp ECCTTCCSCEEEEEECTTSSEEEEEET-------------TSCEEEEETTTCSEEEEEC-CCSSCEEEEEECTTSSCEEE
T ss_pred EcCCCcccceeEEEEeCCCCEEEEEEC-------------CCcEEEEECCCCceEEEEE-CCCCcEEEEEECCCCCEEEE
Confidence 2211 1 567888876665554332 344554454 333333332 44456677888765554444
Q ss_pred E
Q psy17325 385 A 385 (461)
Q Consensus 385 ~ 385 (461)
+
T Consensus 344 g 344 (354)
T 2pbi_B 344 G 344 (354)
T ss_dssp E
T ss_pred E
Confidence 3
No 355
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=92.68 E-value=6.1 Score=36.41 Aligned_cols=192 Identities=8% Similarity=0.017 Sum_probs=100.4
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCc
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~ 229 (461)
....+++.+. +...++-..++.|.+.++........+.........+++.|... .|.-.. ....|...++.+...
T Consensus 67 ~v~~~~~s~d-g~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~--~l~s~s--~D~~i~vwd~~~~~~ 141 (319)
T 3frx_A 67 IVQDCTLTAD-GAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKAS--MIISGS--RDKTIKVWTIKGQCL 141 (319)
T ss_dssp CEEEEEECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSC--EEEEEE--TTSCEEEEETTSCEE
T ss_pred cEEEEEECCC-CCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCC--EEEEEe--CCCeEEEEECCCCeE
Confidence 3455666653 44455556678999999765544333334445678899998755 554443 345777777776543
Q ss_pred EEEEecccccceeEEeeccCC-----eeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCC
Q psy17325 230 STIISTKIYWPNGLTLDIATR-----RVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304 (461)
Q Consensus 230 ~~i~~~~~~~P~glavD~~~~-----~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~ 304 (461)
..+. ........+++.+... .++++-... +.|...++...
T Consensus 142 ~~~~-~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d----------------------------------~~i~~wd~~~~ 186 (319)
T 3frx_A 142 ATLL-GHNDWVSQVRVVPNEKADDDSVTIISAGND----------------------------------KMVKAWNLNQF 186 (319)
T ss_dssp EEEC-CCSSCEEEEEECCC------CCEEEEEETT----------------------------------SCEEEEETTTT
T ss_pred EEEe-ccCCcEEEEEEccCCCCCCCccEEEEEeCC----------------------------------CEEEEEECCcc
Confidence 3332 1223344555544221 122222221 23444555433
Q ss_pred ceEEEEeCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeE
Q psy17325 305 NASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382 (461)
Q Consensus 305 ~~~~l~~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~l 382 (461)
.....+.... ...+++.|.+..|.-+.. .+.|..-++........+ ..-.....|++.+.+..|
T Consensus 187 ~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~-------------dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~sp~~~~l 252 (319)
T 3frx_A 187 QIEADFIGHNSNINTLTASPDGTLIASAGK-------------DGEIMLWNLAAKKAMYTL-SAQDEVFSLAFSPNRYWL 252 (319)
T ss_dssp EEEEEECCCCSCEEEEEECTTSSEEEEEET-------------TCEEEEEETTTTEEEEEE-ECCSCEEEEEECSSSSEE
T ss_pred hhheeecCCCCcEEEEEEcCCCCEEEEEeC-------------CCeEEEEECCCCcEEEEe-cCCCcEEEEEEcCCCCEE
Confidence 3222222222 778899986665543322 334444444333222222 223456788998776666
Q ss_pred EEEcCCCCeEEEEEe
Q psy17325 383 YFADSKLDFIDFCNY 397 (461)
Q Consensus 383 y~~d~~~~~I~~~~~ 397 (461)
..+.. +.|...++
T Consensus 253 a~~~~--~~i~v~~~ 265 (319)
T 3frx_A 253 AAATA--TGIKVFSL 265 (319)
T ss_dssp EEEET--TEEEEEEE
T ss_pred EEEcC--CCcEEEEe
Confidence 66543 45677777
No 356
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=92.67 E-value=6.5 Score=36.70 Aligned_cols=101 Identities=11% Similarity=0.064 Sum_probs=56.7
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcE--E-EEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCC
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--I-VLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~--~-~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~ 227 (461)
...+++.+. +.+..+-..++.|.+.++.+... . .+..+.......+++.|... +|..+.. ...|...+.+..
T Consensus 19 v~~l~~sp~-g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~--~l~s~s~--D~~v~iw~~~~~ 93 (345)
T 3fm0_A 19 CWFLAWNPA-GTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGN--YLASASF--DATTCIWKKNQD 93 (345)
T ss_dssp EEEEEECTT-SSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSS--EEEEEET--TSCEEEEEECCC
T ss_pred EEEEEECCC-CCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCC--EEEEEEC--CCcEEEEEccCC
Confidence 345666654 44555556678888888776542 2 22233334578899999766 6665552 334544444433
Q ss_pred CcEEE--EecccccceeEEeeccCCeeEEec
Q psy17325 228 NRSTI--ISTKIYWPNGLTLDIATRRVYFAD 256 (461)
Q Consensus 228 ~~~~i--~~~~~~~P~glavD~~~~~ly~~d 256 (461)
....+ +.........+++.+.+..|.-+.
T Consensus 94 ~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s 124 (345)
T 3fm0_A 94 DFECVTTLEGHENEVKSVAWAPSGNLLATCS 124 (345)
T ss_dssp -EEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CeEEEEEccCCCCCceEEEEeCCCCEEEEEE
Confidence 22221 222234567888887666555443
No 357
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=92.65 E-value=0.069 Score=50.66 Aligned_cols=70 Identities=34% Similarity=0.845 Sum_probs=45.2
Q ss_pred CCCCCCCCCCCCCCCCCcccCCCCCCCC--CceeCCCCceEeCCCCCeecCCCCceecCcceecCCccc--CceeeccCC
Q psy17325 15 KTDCPNGADEGPGCDLAECKHKFGLCSN--TCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCS--QMCTNTKGS 90 (461)
Q Consensus 15 ~~dC~dg~de~~~C~~~~C~~~~~~C~~--~C~~~~~~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~--~~C~~~~g~ 90 (461)
.-.|+.|+. +..|+.+.|.. .|.+ .|.. .+.|.|++||. +..|+. .+|. ..|. ..|.+ .
T Consensus 166 ~C~C~~G~~-G~~C~~~~C~~---~C~~~G~C~~---~~~C~C~~G~~----G~~C~~-~~C~--~~C~~~G~C~~---~ 228 (324)
T 2ygq_A 166 ICECPDGFH-GPHCEKALCTP---RCMNGGLCVT---PGFCICPPGFY----GVNCDK-ANCS--TTCFNGGTCFY---P 228 (324)
T ss_dssp CEECCTTEE-SSSSCEESSSS---CCCTTCEECS---SCCEECCTTCB----TTTTCB-CCCS--SCCCSSCCBSC---S
T ss_pred eEECCCCCc-CCCCCCCCCCC---CCCCCCEEcC---CCEEeCCCCcc----CCCccc-CcCC--CCCCCCCeeCC---C
Confidence 346888884 46787767753 4543 4654 47899999996 556753 3343 2343 24544 3
Q ss_pred ccccCCCCeee
Q psy17325 91 YICSCNEGYVL 101 (461)
Q Consensus 91 ~~C~C~~g~~l 101 (461)
+.|.|++||..
T Consensus 229 ~~C~C~~G~~G 239 (324)
T 2ygq_A 229 GKCICPPGLEG 239 (324)
T ss_dssp SCBCCCTTCCT
T ss_pred CeeeCCCCccC
Confidence 68999999873
No 358
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=92.64 E-value=5.8 Score=36.08 Aligned_cols=103 Identities=10% Similarity=-0.012 Sum_probs=57.0
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCc----EEEEecCCCCCceeEEEcCC--CCceEEEEeecCCCCcEEEEe
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN----RIVLAKDNITQPRGMMLDPS--PGTRWLFWTDWGENPRIERIG 223 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~----~~~l~~~~~~~p~~ia~d~~--~g~~~ly~td~~~~~~I~~~~ 223 (461)
.+..+++.+.+ ++.++-..++.|.+.+++... ....+...-.....|++.|. .. +|+.+. ....|...+
T Consensus 13 ~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~--~l~s~~--~dg~v~vwd 87 (351)
T 3f3f_A 13 LVHDVVYDFYG-RHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGR--IIASAS--YDKTVKLWE 87 (351)
T ss_dssp CEEEEEECSSS-SEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCS--EEEEEE--TTSCEEEEE
T ss_pred ceeEEEEcCCC-CEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCC--EEEEEc--CCCeEEEEe
Confidence 35567777644 444555567889888876432 12222333355788999884 33 454444 345677666
Q ss_pred cCCCC--------c-EEEEecccccceeEEeecc--CCeeEEecC
Q psy17325 224 MDGSN--------R-STIISTKIYWPNGLTLDIA--TRRVYFADS 257 (461)
Q Consensus 224 ~dG~~--------~-~~i~~~~~~~P~glavD~~--~~~ly~~d~ 257 (461)
+.... . ...+.........+++.+. +..|+.+..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~ 132 (351)
T 3f3f_A 88 EDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN 132 (351)
T ss_dssp ECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred cCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecC
Confidence 65432 1 1122223345678888876 555554443
No 359
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=92.57 E-value=8 Score=37.50 Aligned_cols=73 Identities=12% Similarity=0.078 Sum_probs=42.4
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCC
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~ 227 (461)
+..+++. .+.++++-..++.|.+.+++.......+.........+++.+.....+|+... ....|...++...
T Consensus 165 V~~l~~~--~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s--~d~~i~vwd~~~~ 237 (464)
T 3v7d_B 165 VWALKYA--HGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGS--RDNTLHVWKLPKE 237 (464)
T ss_dssp EEEEEEC--STTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEE--TTSCEEEEECCCC
T ss_pred EEEEEEc--CCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEc--CCCcEEEeeCCCC
Confidence 4445554 33366677778899999987655444444444557778887532212444443 3456666666543
No 360
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=92.55 E-value=0.088 Score=51.89 Aligned_cols=52 Identities=25% Similarity=0.708 Sum_probs=31.4
Q ss_pred CCCCceEeCCCCCeecCCCCceecC-------cceecCCccc--CceeeccCCccccCCCCeeeeCCCCcee
Q psy17325 47 TPLGALCTCPPGEILSNDSVTCQDM-------NECEQPGYCS--QMCTNTKGSYICSCNEGYVLEYDNHTCK 109 (461)
Q Consensus 47 ~~~~~~C~C~~G~~l~~~~~~C~d~-------~eC~~~~~C~--~~C~~~~g~~~C~C~~g~~l~~~~~~C~ 109 (461)
.++++.|.|++||. +..|+.. ..|...-.|. ..|.+.. .|.|++||. +..|.
T Consensus 259 ~~~~~~C~C~~G~~----G~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~---~C~C~~G~~----G~~Ce 319 (423)
T 2gy5_A 259 LPDPYGCSCATGWK----GLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQ---GCLCSPGWQ----GLQCE 319 (423)
T ss_dssp ETTTTEEECCBTCB----SGGGCBCCCTTBCSBTTCCBCCCTTCCEEETTT---EEECCTTCB----STTSC
T ss_pred CCCCCeEEeCCCcc----cccccCccCCCCcCCcccccccCCCCCEecCCC---ceECCCCCc----CCCCc
Confidence 46789999999996 5566531 1221111232 2565543 399999995 55674
No 361
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=92.45 E-value=7.5 Score=36.86 Aligned_cols=202 Identities=9% Similarity=-0.028 Sum_probs=103.7
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCC-
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN- 228 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~- 228 (461)
.+..+++.+. +++.++-+.++.|.+.+.........+.........+++.|... +|.... ....|...++....
T Consensus 68 ~V~~~~~sp~-~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~--~las~~--~d~~v~iw~~~~~~~ 142 (380)
T 3iz6_a 68 KVYSLDWTPE-KNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQ--SVACGG--LDSACSIFNLSSQAD 142 (380)
T ss_dssp CEEEEEECTT-SSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSS--EEEECC--SSSCCEEEECCCCSS
T ss_pred EEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCC--EEEEee--CCCcEEEEECCCCcc
Confidence 3455666654 44555666678999999766555444444445577889998755 555443 33455544443211
Q ss_pred -----c-EEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCC
Q psy17325 229 -----R-STIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMD 302 (461)
Q Consensus 229 -----~-~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~ 302 (461)
. ...+.........+++.+..+...++-... +.|...++.
T Consensus 143 ~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D----------------------------------~~i~~wd~~ 188 (380)
T 3iz6_a 143 RDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGD----------------------------------QTCVLWDVT 188 (380)
T ss_dssp CCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTT----------------------------------SCEEEECTT
T ss_pred ccCCccceeeccCCCcceEEEEEecCCCCEEEEECCC----------------------------------CcEEEEEcC
Confidence 0 001111112233444444333322232222 134444444
Q ss_pred CCceEEEEeC-----Ce--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeec--CCCeEEEeeCCCCCceeE
Q psy17325 303 GSNASILVSG-----QL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD--GSNRSTIISTKIYWPNGL 373 (461)
Q Consensus 303 g~~~~~l~~~-----~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~d--G~~~~~l~~~~l~~p~gl 373 (461)
.......+.. .. ...+++.+.++.++.+-.. .+.|...++. +.....+. ..-.....|
T Consensus 189 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~------------D~~v~~wd~~~~~~~~~~~~-~h~~~v~~v 255 (380)
T 3iz6_a 189 TGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSC------------DTTVRLWDLRITSRAVRTYH-GHEGDINSV 255 (380)
T ss_dssp TCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEET------------TSCEEEEETTTTCCCCEEEC-CCSSCCCEE
T ss_pred CCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEEC------------CCeEEEEECCCCCcceEEEC-CcCCCeEEE
Confidence 3333222211 11 5667777766777766554 4455555543 22233332 444567889
Q ss_pred EEecCCCeEEEEcCCCCeEEEEEecCCCCeEE
Q psy17325 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQV 405 (461)
Q Consensus 374 aiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~ 405 (461)
++.+.+ +.+.+-...+.|...++. +|....
T Consensus 256 ~~~p~~-~~l~s~s~D~~i~lwd~~-~~~~~~ 285 (380)
T 3iz6_a 256 KFFPDG-QRFGTGSDDGTCRLFDMR-TGHQLQ 285 (380)
T ss_dssp EECTTS-SEEEEECSSSCEEEEETT-TTEEEE
T ss_pred EEecCC-CeEEEEcCCCeEEEEECC-CCcEEE
Confidence 998554 445555667788888883 454433
No 362
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=92.44 E-value=6.2 Score=35.89 Aligned_cols=72 Identities=10% Similarity=0.041 Sum_probs=44.4
Q ss_pred ceeeeeeeec-CCeEEEEeCCCCeEEEEeCCCCc---------EEEEecCCCCCceeEEEcCC--CCceEEEEeecCCCC
Q psy17325 150 LVEGLAYDWI-GGHIYWLDSRLNRIEVCDENGTN---------RIVLAKDNITQPRGMMLDPS--PGTRWLFWTDWGENP 217 (461)
Q Consensus 150 ~p~~iavd~~-~~~ly~~d~~~~~I~~~~~~G~~---------~~~l~~~~~~~p~~ia~d~~--~g~~~ly~td~~~~~ 217 (461)
.+..+++.+. .++++++-..++.|.+.+++... ....+...-.....+++.|. .. +|+.+. ...
T Consensus 59 ~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~l~~~~--~dg 134 (351)
T 3f3f_A 59 SIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGL--KLACLG--NDG 134 (351)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCS--EEEEEE--TTC
T ss_pred cEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCc--EEEEec--CCC
Confidence 4556666654 36666666778899999876542 22223333355788999987 44 555544 345
Q ss_pred cEEEEecC
Q psy17325 218 RIERIGMD 225 (461)
Q Consensus 218 ~I~~~~~d 225 (461)
.|...++.
T Consensus 135 ~v~iwd~~ 142 (351)
T 3f3f_A 135 ILRLYDAL 142 (351)
T ss_dssp EEEEEECS
T ss_pred cEEEecCC
Confidence 67776664
No 363
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=92.43 E-value=1.3 Score=45.51 Aligned_cols=107 Identities=11% Similarity=0.169 Sum_probs=67.4
Q ss_pred cCccceeeeeeeecCCeEEEEeCC---------------------CCeEEEEeCCCCc--------EEEEec--------
Q psy17325 146 SGLDLVEGLAYDWIGGHIYWLDSR---------------------LNRIEVCDENGTN--------RIVLAK-------- 188 (461)
Q Consensus 146 ~g~~~p~~iavd~~~~~ly~~d~~---------------------~~~I~~~~~~G~~--------~~~l~~-------- 188 (461)
+.+.+||++++++.++.||++-++ .++|.+..+++.. ...++.
T Consensus 381 T~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~ 460 (592)
T 3zwu_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred EEEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccc
Confidence 467899999999999999998653 3678888754321 111211
Q ss_pred ------------CCCCCceeEEEcCCCCceEEEEeecCC-----------CCcEEEEecCCCCcEEEEec-ccccceeEE
Q psy17325 189 ------------DNITQPRGMMLDPSPGTRWLFWTDWGE-----------NPRIERIGMDGSNRSTIIST-KIYWPNGLT 244 (461)
Q Consensus 189 ------------~~~~~p~~ia~d~~~g~~~ly~td~~~-----------~~~I~~~~~dG~~~~~i~~~-~~~~P~gla 244 (461)
..+..|..|++|+..+ ||+..=+. +..+............++.. .-.-..|++
T Consensus 461 ~~~~~~~~~~~~~~f~~PDNL~fd~~G~---LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~ 537 (592)
T 3zwu_A 461 TPKGGSSNITPQNMFNSPDGLGFDKAGR---LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGIS 537 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECTTCC---EEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEE
T ss_pred cccccccccCCCCCccCCcceEECCCCC---EEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCee
Confidence 1366899999999744 66553132 23455555442233333322 223467999
Q ss_pred eeccCCeeEEe
Q psy17325 245 LDIATRRVYFA 255 (461)
Q Consensus 245 vD~~~~~ly~~ 255 (461)
+.+..+.||+.
T Consensus 538 fspDg~tlfvn 548 (592)
T 3zwu_A 538 FSPDQKTLFVG 548 (592)
T ss_dssp ECTTSSEEEEE
T ss_pred ECCCCCEEEEE
Confidence 99988888875
No 364
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=92.35 E-value=7.1 Score=36.33 Aligned_cols=193 Identities=7% Similarity=0.005 Sum_probs=99.9
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCc
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~ 229 (461)
.+..+++.+ .+++..+-..++.|.+.+.........+...-.....+++.|... +|.... ....|...++.....
T Consensus 57 ~v~~~~~s~-d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~s~~--~d~~v~iw~~~~~~~ 131 (340)
T 1got_B 57 KIYAMHWGT-DSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN--YVACGG--LDNICSIYNLKTREG 131 (340)
T ss_dssp CEEEEEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSS--EEEEEE--TTCEEEEEETTTCSB
T ss_pred ceEEEEECC-CCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCC--EEEEEe--CCCeEEEEECccCCC
Confidence 345566664 345556666788999998665444333333334577889998765 666554 335666666653221
Q ss_pred --EE--EEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCc
Q psy17325 230 --ST--IISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN 305 (461)
Q Consensus 230 --~~--i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~ 305 (461)
.. .+.........+++.+ .+.|+.+... +.|...++....
T Consensus 132 ~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~d-----------------------------------~~i~~wd~~~~~ 175 (340)
T 1got_B 132 NVRVSRELAGHTGYLSCCRFLD-DNQIVTSSGD-----------------------------------TTCALWDIETGQ 175 (340)
T ss_dssp SCEEEEEEECCSSCEEEEEEEE-TTEEEEEETT-----------------------------------SCEEEEETTTTE
T ss_pred cceeEEEecCCCccEEEEEECC-CCcEEEEECC-----------------------------------CcEEEEECCCCc
Confidence 11 1111222334455543 3333333222 234444544333
Q ss_pred eEEEEeCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEE
Q psy17325 306 ASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 383 (461)
Q Consensus 306 ~~~l~~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly 383 (461)
....+.... ...+++.|.+. ++++-.. .+.|...++........+...-....+|++.+.+..|.
T Consensus 176 ~~~~~~~h~~~v~~~~~~~~~~-~l~sg~~------------d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~ 242 (340)
T 1got_B 176 QTTTFTGHTGDVMSLSLAPDTR-LFVSGAC------------DASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSS-EEEEEET------------TSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred EEEEEcCCCCceEEEEECCCCC-EEEEEeC------------CCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEE
Confidence 222222222 77888888554 4444333 34444444433222222223445678899986555444
Q ss_pred EEcCCCCeEEEEEe
Q psy17325 384 FADSKLDFIDFCNY 397 (461)
Q Consensus 384 ~~d~~~~~I~~~~~ 397 (461)
+-...+.|...++
T Consensus 243 -s~s~d~~v~iwd~ 255 (340)
T 1got_B 243 -TGSDDATCRLFDL 255 (340)
T ss_dssp -EEETTSCEEEEET
T ss_pred -EEcCCCcEEEEEC
Confidence 4455678888888
No 365
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=92.33 E-value=0.043 Score=46.75 Aligned_cols=79 Identities=24% Similarity=0.626 Sum_probs=46.9
Q ss_pred CCCCCCCCCCCCCCCcccCCCCCCCC-CceeCCCCceEeCCCCCeecCCCCceecCcceecCCcccC-ceeeccCCcccc
Q psy17325 17 DCPNGADEGPGCDLAECKHKFGLCSN-TCHPTPLGALCTCPPGEILSNDSVTCQDMNECEQPGYCSQ-MCTNTKGSYICS 94 (461)
Q Consensus 17 dC~dg~de~~~C~~~~C~~~~~~C~~-~C~~~~~~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~-~C~~~~g~~~C~ 94 (461)
.|..|+- +..|+.++|.. ...|.+ .|.+ .+.|.|++||. +..|+ +|.....|.+ .|. +++.|.
T Consensus 53 ~C~~G~~-G~~C~~~~C~~-~C~~~~g~C~~---~~~C~C~~G~~----G~~C~---~C~~~~~C~~g~C~---~~~~C~ 117 (169)
T 2vj2_A 53 TCMEGWM-GPECNRAICRQ-GCSPKHGSCKL---PGDCRCQYGWQ----GLYCD---KCIPHPGCVHGICN---EPWQCL 117 (169)
T ss_dssp EECTTEE-STTSCEECCCT-TCCTTTEECSS---TTCCEECTTEE----SSSSC---EECCCTTCSSEECS---STTCCE
T ss_pred ECCCCCc-CCCCCCCCCCC-CCCCCCcccCC---CCeeECCCCCC----CCCcc---cCCCCCCCCCCCcC---CCCEEe
Confidence 4666663 35676555642 111122 3543 57899999996 55664 4543333543 555 578999
Q ss_pred CCCCeeeeCCCCcee-ecccc
Q psy17325 95 CNEGYVLEYDNHTCK-AINHS 114 (461)
Q Consensus 95 C~~g~~l~~~~~~C~-~~~~~ 114 (461)
|++||. +..|. +++++
T Consensus 118 C~~G~~----G~~C~~~~~~C 134 (169)
T 2vj2_A 118 CETNWG----GQLCDKDLNYC 134 (169)
T ss_dssp ECTTEE----TTTTCEESCHH
T ss_pred CCCCCC----CCcccCCCCCC
Confidence 999996 45675 55554
No 366
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=92.21 E-value=8.2 Score=36.77 Aligned_cols=152 Identities=9% Similarity=0.003 Sum_probs=80.9
Q ss_pred ceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeee
Q psy17325 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273 (461)
Q Consensus 194 p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v 273 (461)
...+++.|... +|+... ....|...++........+.........+++.+.+..|+-+....
T Consensus 126 v~~v~~s~dg~--~l~s~~--~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~-------------- 187 (393)
T 1erj_A 126 IRSVCFSPDGK--FLATGA--EDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDR-------------- 187 (393)
T ss_dssp EEEEEECTTSS--EEEEEE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS--------------
T ss_pred EEEEEECCCCC--EEEEEc--CCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCC--------------
Confidence 56889988755 665544 346777777765433333333344567888887776665544332
Q ss_pred ccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEE
Q psy17325 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352 (461)
Q Consensus 274 ~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~ 352 (461)
.|...++........+.... ...+++.|..+.++.+-.. .+.|...
T Consensus 188 ---------------------~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~------------d~~v~iw 234 (393)
T 1erj_A 188 ---------------------TVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSL------------DRAVRVW 234 (393)
T ss_dssp ---------------------EEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEET------------TSCEEEE
T ss_pred ---------------------cEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcC------------CCcEEEE
Confidence 34444544333322222222 6778888856655555443 2333333
Q ss_pred eecCCC-eEEEe------eCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEe
Q psy17325 353 GMDGSN-RSTII------STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397 (461)
Q Consensus 353 ~~dG~~-~~~l~------~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~ 397 (461)
++.... ...+. ...-.....|++.+.+..|+.+ ...+.|...++
T Consensus 235 d~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~-s~d~~v~~wd~ 285 (393)
T 1erj_A 235 DSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG-SLDRSVKLWNL 285 (393)
T ss_dssp ETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEEC
T ss_pred ECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEE-eCCCEEEEEEC
Confidence 332211 11111 1223356778888655555444 44567777776
No 367
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=91.88 E-value=9.7 Score=36.90 Aligned_cols=226 Identities=11% Similarity=0.017 Sum_probs=113.6
Q ss_pred ceeeeeeee-cCCeEEEEeCCCCeEEEEeCCCCcEE-----------------------EEecCCCCCceeEEEcCCCCc
Q psy17325 150 LVEGLAYDW-IGGHIYWLDSRLNRIEVCDENGTNRI-----------------------VLAKDNITQPRGMMLDPSPGT 205 (461)
Q Consensus 150 ~p~~iavd~-~~~~ly~~d~~~~~I~~~~~~G~~~~-----------------------~l~~~~~~~p~~ia~d~~~g~ 205 (461)
....+++.+ ..+.+.++-..++.|.+.++...... ............ +.+...
T Consensus 205 ~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~- 281 (464)
T 3v7d_B 205 TVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRT--VSGHGN- 281 (464)
T ss_dssp CEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEE--EEEETT-
T ss_pred ccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEE--EcCCCC-
Confidence 345566654 24566667777788888887654321 111111122223 333333
Q ss_pred eEEEEeecCCCCcEEEEecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEE
Q psy17325 206 RWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWI 285 (461)
Q Consensus 206 ~~ly~td~~~~~~I~~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~ 285 (461)
.|+... ....|...++........+.........+++++.+..|+.+....
T Consensus 282 -~l~~~~--~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg-------------------------- 332 (464)
T 3v7d_B 282 -IVVSGS--YDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDT-------------------------- 332 (464)
T ss_dssp -EEEEEE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTS--------------------------
T ss_pred -EEEEEe--CCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCC--------------------------
Confidence 555544 345677777654332222322334567888888666666554432
Q ss_pred ecCCCCcceeeeEEeCCCCceEEEEeCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEe
Q psy17325 286 DEGGNGVPLKIGKANMDGSNASILVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTII 363 (461)
Q Consensus 286 d~~~~~~~~~I~~~~~~g~~~~~l~~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~ 363 (461)
.|...++........+.... ...++++ +..|..+ .. .+.|...++.........
T Consensus 333 ---------~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~-s~------------dg~v~vwd~~~~~~~~~~ 388 (464)
T 3v7d_B 333 ---------TIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSA-AA------------DGSIRGWDANDYSRKFSY 388 (464)
T ss_dssp ---------CEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEE-ET------------TSEEEEEETTTCCEEEEE
T ss_pred ---------cEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEE-eC------------CCcEEEEECCCCceeeee
Confidence 35555554332222222221 5666665 3433332 22 344555555433333222
Q ss_pred eCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeCCC
Q psy17325 364 STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGA 443 (461)
Q Consensus 364 ~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~~~ 443 (461)
..-.....+++.+.+..|.... .+.|...++. +|........... .+..++++.++.++.+-...
T Consensus 389 -~~~~~~~~~~~~~~~~~l~~~~--dg~i~iwd~~-~g~~~~~~~~~~~-----------~~v~~v~~~~~~l~~~~~~~ 453 (464)
T 3v7d_B 389 -HHTNLSAITTFYVSDNILVSGS--ENQFNIYNLR-SGKLVHANILKDA-----------DQIWSVNFKGKTLVAAVEKD 453 (464)
T ss_dssp -ECTTCCCEEEEEECSSEEEEEE--TTEEEEEETT-TCCEEESCTTTTC-----------SEEEEEEEETTEEEEEEEET
T ss_pred -cCCCCccEEEEEeCCCEEEEec--CCeEEEEECC-CCcEEehhhccCC-----------CcEEEEEecCCEEEEEEEeC
Confidence 2333445567775555555444 5788888883 4543221111111 12567778888888876666
Q ss_pred cee
Q psy17325 444 EFL 446 (461)
Q Consensus 444 ~~i 446 (461)
+.+
T Consensus 454 g~~ 456 (464)
T 3v7d_B 454 GQS 456 (464)
T ss_dssp TEE
T ss_pred CeE
Confidence 544
No 368
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=91.69 E-value=10 Score=36.90 Aligned_cols=106 Identities=9% Similarity=-0.043 Sum_probs=63.6
Q ss_pred ceeeeeeeecCCeEEE---EeCCCCeEEEEeCCCC------cE-----EEEecCCCCCceeEEEcCCCCceEEEEeecCC
Q psy17325 150 LVEGLAYDWIGGHIYW---LDSRLNRIEVCDENGT------NR-----IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGE 215 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~---~d~~~~~I~~~~~~G~------~~-----~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~ 215 (461)
.+..+++.+.+..|++ +-...+.|.+.++... .. ..+..+.-..+.+|++.|..+ .++.+- +.
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~--~~las~-s~ 170 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVP--SMVAVC-LA 170 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCT--TEEEEE-ET
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCC--CEEEEE-EC
Confidence 4677888877777776 5566778888885432 10 112222224578999999855 566554 34
Q ss_pred CCcEEEEecCCCCcEEEEecccccceeEEeeccCCeeEEecCC
Q psy17325 216 NPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSK 258 (461)
Q Consensus 216 ~~~I~~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~ 258 (461)
...|...++............-..+..+++.+.+..|+.+...
T Consensus 171 Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~d 213 (434)
T 2oit_A 171 DGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQN 213 (434)
T ss_dssp TSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETT
T ss_pred CCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCC
Confidence 4677777776442211111123467889998877777666543
No 369
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=91.48 E-value=0.075 Score=55.58 Aligned_cols=42 Identities=24% Similarity=0.582 Sum_probs=31.6
Q ss_pred ceEeCC----CCCeecCCCCcee-cCcceecC--Cccc--CceeeccCCccccCCCCee
Q psy17325 51 ALCTCP----PGEILSNDSVTCQ-DMNECEQP--GYCS--QMCTNTKGSYICSCNEGYV 100 (461)
Q Consensus 51 ~~C~C~----~G~~l~~~~~~C~-d~~eC~~~--~~C~--~~C~~~~g~~~C~C~~g~~ 100 (461)
+.|.|+ +||. |..|+ ++++|... ..|+ ..|.+ +.|.|++||.
T Consensus 504 g~C~C~~~~~~Gy~----G~~Ce~~~~~C~~~~~~~C~~~G~C~~----g~C~C~~Gy~ 554 (690)
T 3fcs_B 504 GQCVCHSSDFGKIT----GKYCECDDFSCVRYKGEMCSGHGQCSC----GDCLCDSDWT 554 (690)
T ss_dssp SSEEECCCSSCCCB----STTSCBCSSCCCBSSSSBGGGSEEEET----TEEEECTTEE
T ss_pred CeeEeecCCCCCee----CCCcCcccCcCcCCCCCCCCCCCEecC----CeeECcCCCc
Confidence 689999 8985 67886 67788632 3575 36765 6899999995
No 370
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=91.17 E-value=9.5 Score=35.42 Aligned_cols=89 Identities=8% Similarity=-0.036 Sum_probs=54.6
Q ss_pred EEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEecccccceeE
Q psy17325 164 YWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGL 243 (461)
Q Consensus 164 y~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~~~~~P~gl 243 (461)
+++-..++.|.+.++........+.........+++.|... ++.+- +....|...++........+.........+
T Consensus 157 l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~---~l~sg-~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v 232 (340)
T 1got_B 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTR---LFVSG-ACDASAKLWDVREGMCRQTFTGHESDINAI 232 (340)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS---EEEEE-ETTSCEEEEETTTCSEEEEECCCSSCEEEE
T ss_pred EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCC---EEEEE-eCCCcEEEEECCCCeeEEEEcCCcCCEEEE
Confidence 55566678899998765554444444445678899998755 44443 344677777776443333333334457789
Q ss_pred EeeccCCeeEEec
Q psy17325 244 TLDIATRRVYFAD 256 (461)
Q Consensus 244 avD~~~~~ly~~d 256 (461)
++.+.+..|..+.
T Consensus 233 ~~~p~~~~l~s~s 245 (340)
T 1got_B 233 CFFPNGNAFATGS 245 (340)
T ss_dssp EECTTSSEEEEEE
T ss_pred EEcCCCCEEEEEc
Confidence 9988665555443
No 371
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.07 E-value=10 Score=38.36 Aligned_cols=171 Identities=15% Similarity=0.177 Sum_probs=97.9
Q ss_pred ceEEEEeecCCCCcEEEEecCCCCcEEEEe-cccccceeEEee--ccCCeeEEecCCCceeeecccceeeee--ccceee
Q psy17325 205 TRWLFWTDWGENPRIERIGMDGSNRSTIIS-TKIYWPNGLTLD--IATRRVYFADSKLDFIDCKSLEIKTNV--NYSTIF 279 (461)
Q Consensus 205 ~~~ly~td~~~~~~I~~~~~dG~~~~~i~~-~~~~~P~glavD--~~~~~ly~~d~~~~~i~~~~~~~~~~v--~~~~~~ 279 (461)
+++||+.| ..+++|-|++++--....|+. .+.....|+.+. +.++.+|......-.+-- ++ +.+ +...-|
T Consensus 142 GrylfiNd-kan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pn-dg---~~~~~~~~~~y 216 (638)
T 3sbq_A 142 GKYLFIND-KANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPN-DG---KVFDLQDENSY 216 (638)
T ss_dssp EEEEEEEE-TTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSC-SS---SCCCTTSTTEE
T ss_pred eEEEEEec-CCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCC-CC---cccccCChhhc
Confidence 56999999 888999999999755444543 356677788887 466666654433211000 00 000 000112
Q ss_pred eEEEEEecCCCCcceeeeEEeCCCCce----EEEEeCCeeeeEEEeccCCeEEEeecCc-------------eeeEEEee
Q psy17325 280 RKLYWIDEGGNGVPLKIGKANMDGSNA----SILVSGQLYEALALDLENGMLYYSTLKC-------------TRWLFWTD 342 (461)
Q Consensus 280 ~~~yw~d~~~~~~~~~I~~~~~~g~~~----~~l~~~~~p~~iavd~~~~~lY~t~~~~-------------~~~l~~~d 342 (461)
.+|. ..|+... ++++. +.+.....|+.++..|+|..++ ..|+...+
T Consensus 217 -~~f~---------------~iD~~tm~v~~Qv~v~-gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn 279 (638)
T 3sbq_A 217 -TMYN---------------AIDAETMEMAFQVIVD-GNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFD 279 (638)
T ss_dssp -EEEE---------------EEETTTCSEEEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEE
T ss_pred -eEEE---------------EEcCCccEEEEEEEcC-CChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEec
Confidence 1211 1222222 22222 2255667788888888876542 45777776
Q ss_pred cCC------CCc---eE---EEeecCCC-------eEEEeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEec
Q psy17325 343 WGE------NPR---IE---RIGMDGSN-------RSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYD 398 (461)
Q Consensus 343 ~~~------~~~---I~---~~~~dG~~-------~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~ 398 (461)
|.. .++ |. .--+||.. ..-.+ ..-..|.|+-++++++++|++.....++..++..
T Consensus 280 ~~~ie~~vk~G~~~~~~g~gv~ViD~~~~~~~~~~~~~~i-P~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~ 353 (638)
T 3sbq_A 280 IHAVEAAVKAGDFITLGDSKTPVLDGRKKDGKDSKFTRYV-PVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAID 353 (638)
T ss_dssp HHHHHHHHHTTCCBCCTTCCCCEEECSCBTTBCCSSEEEE-EESSSCCCEEECTTSCEEEEECTTSSBEEEEEGG
T ss_pred HHHHHHHHhcCCeEEECCCCeeEEccccccccCCceEEEE-eCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEee
Confidence 621 111 10 00123322 12222 3346899999999999999999999999999883
No 372
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=90.92 E-value=15 Score=37.37 Aligned_cols=103 Identities=11% Similarity=0.023 Sum_probs=61.0
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecC-CCC
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD-GSN 228 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~d-G~~ 228 (461)
.+..+++.+.+..+..+-..++.|.+.+.........+.+.-.....+++.|... + +.+- +....|...++. |..
T Consensus 149 ~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~--~-las~-s~D~~i~lwd~~~g~~ 224 (611)
T 1nr0_A 149 AMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGS--L-FAST-GGDGTIVLYNGVDGTK 224 (611)
T ss_dssp CEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSS--E-EEEE-ETTSCEEEEETTTCCE
T ss_pred CceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCC--E-EEEE-ECCCcEEEEECCCCcE
Confidence 3556777765555677777788898888654433333444445578999999744 4 4443 344567766654 332
Q ss_pred cEEEEe------cccccceeEEeeccCCeeEEec
Q psy17325 229 RSTIIS------TKIYWPNGLTLDIATRRVYFAD 256 (461)
Q Consensus 229 ~~~i~~------~~~~~P~glavD~~~~~ly~~d 256 (461)
...+.. .......++++.+.+..|.-+.
T Consensus 225 ~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s 258 (611)
T 1nr0_A 225 TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASAS 258 (611)
T ss_dssp EEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEE
T ss_pred eeeeccccccccccCCCEEEEEECCCCCEEEEEe
Confidence 222211 1223567888887666555443
No 373
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=90.69 E-value=19 Score=37.96 Aligned_cols=105 Identities=14% Similarity=0.168 Sum_probs=64.0
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecC-C-----CCCceeEEEcCCC-CceEEEEeec------CC-
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD-N-----ITQPRGMMLDPSP-GTRWLFWTDW------GE- 215 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~-~-----~~~p~~ia~d~~~-g~~~ly~td~------~~- 215 (461)
+..+|++++....+.|+-...+.|++.+-.|..=+.+... . .....+|++||.. + .||++-- ..
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~--~v~v~~~~~~~~~~~~ 101 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPN--RVYIVAGMYTNDWLPN 101 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTT--CEEEEECSCSSSSSCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCC--EEEEEecccccccccC
Confidence 5678999887644444444457899988777765554331 1 1235689999853 4 7887641 11
Q ss_pred CCcEEEEecCCCCcEEEEec-cc-------ccceeEEeeccC-CeeEEec
Q psy17325 216 NPRIERIGMDGSNRSTIIST-KI-------YWPNGLTLDIAT-RRVYFAD 256 (461)
Q Consensus 216 ~~~I~~~~~dG~~~~~i~~~-~~-------~~P~glavD~~~-~~ly~~d 256 (461)
...|+|..=.|...+.+... .. .....|++|+.+ +.||...
T Consensus 102 ~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~ 151 (737)
T 2cn3_A 102 MGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT 151 (737)
T ss_dssp CCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC
T ss_pred CccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee
Confidence 24677776667766655432 11 012579999875 5666654
No 374
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=90.45 E-value=13 Score=36.19 Aligned_cols=64 Identities=5% Similarity=-0.209 Sum_probs=35.3
Q ss_pred CceeEEEcCCCCceEEEE---eecCCCCcEEEEecCCC------Cc---EEEE--ecccccceeEEeeccCCeeEEecCC
Q psy17325 193 QPRGMMLDPSPGTRWLFW---TDWGENPRIERIGMDGS------NR---STII--STKIYWPNGLTLDIATRRVYFADSK 258 (461)
Q Consensus 193 ~p~~ia~d~~~g~~~ly~---td~~~~~~I~~~~~dG~------~~---~~i~--~~~~~~P~glavD~~~~~ly~~d~~ 258 (461)
.+..+++.|... +|++ +- +....|...++... .. ..+. ...-....+|++.+..+.++.+-..
T Consensus 94 ~v~~l~~spdg~--~lav~~~sg-s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 94 PIHHLALSCDNL--TLSACMMSS-EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp CEEEEEECTTSC--EEEEEEEET-TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred cccEEEEcCCCC--EEEEEEecc-CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 478899999866 7775 32 23356666655321 11 1111 1123457788888765555554433
Q ss_pred C
Q psy17325 259 L 259 (461)
Q Consensus 259 ~ 259 (461)
.
T Consensus 171 D 171 (434)
T 2oit_A 171 D 171 (434)
T ss_dssp T
T ss_pred C
Confidence 3
No 375
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=90.44 E-value=13 Score=35.78 Aligned_cols=90 Identities=11% Similarity=0.077 Sum_probs=49.0
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcE---EEEecc
Q psy17325 160 GGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS---TIISTK 236 (461)
Q Consensus 160 ~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~---~i~~~~ 236 (461)
.+++.++-..++.|.+.++........+.........+++++ + .|+... ....|...++...... ......
T Consensus 182 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~--~l~s~s--~dg~i~vwd~~~~~~~~~~~~~~~~ 255 (435)
T 1p22_A 182 DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--G--MMVTCS--KDRSIAVWDMASPTDITLRRVLVGH 255 (435)
T ss_dssp CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--T--EEEEEE--TTSCEEEEECSSSSCCEEEEEECCC
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--C--EEEEee--CCCcEEEEeCCCCCCceeeeEecCC
Confidence 455666667788999999765444333333334466666653 4 555544 3457777777644332 122222
Q ss_pred cccceeEEeeccCCeeEEecC
Q psy17325 237 IYWPNGLTLDIATRRVYFADS 257 (461)
Q Consensus 237 ~~~P~glavD~~~~~ly~~d~ 257 (461)
......+++| ++.|+.+..
T Consensus 256 ~~~v~~~~~~--~~~l~s~~~ 274 (435)
T 1p22_A 256 RAAVNVVDFD--DKYIVSASG 274 (435)
T ss_dssp SSCEEEEEEE--TTEEEEEET
T ss_pred CCcEEEEEeC--CCEEEEEeC
Confidence 2334455553 555555543
No 376
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=90.29 E-value=13 Score=35.69 Aligned_cols=89 Identities=8% Similarity=-0.004 Sum_probs=47.6
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEeccccc
Q psy17325 160 GGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYW 239 (461)
Q Consensus 160 ~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~~~~~ 239 (461)
.+...++-..++.|.+.++........+...-.....+++| .. .|+... ....|...++........+......
T Consensus 142 d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~--~l~sg~--~dg~i~vwd~~~~~~~~~~~~h~~~ 215 (435)
T 1p22_A 142 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD--ER--VIITGS--SDSTVRVWDVNTGEMLNTLIHHCEA 215 (435)
T ss_dssp CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECC--SS--EEEEEE--TTSCEEEEESSSCCEEEEECCCCSC
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEEC--CC--EEEEEc--CCCeEEEEECCCCcEEEEEcCCCCc
Confidence 34555566667889999976554444444333445666664 23 555444 4467777777644332222222333
Q ss_pred ceeEEeeccCCeeEEec
Q psy17325 240 PNGLTLDIATRRVYFAD 256 (461)
Q Consensus 240 P~glavD~~~~~ly~~d 256 (461)
...++++ .+.|+.+.
T Consensus 216 v~~l~~~--~~~l~s~s 230 (435)
T 1p22_A 216 VLHLRFN--NGMMVTCS 230 (435)
T ss_dssp EEEEECC--TTEEEEEE
T ss_pred EEEEEEc--CCEEEEee
Confidence 4455554 44444433
No 377
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=90.04 E-value=14 Score=35.43 Aligned_cols=104 Identities=12% Similarity=0.049 Sum_probs=54.6
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeC----CCCcEEEEecC-----------CCCCceeEE--EcCCCCceEEEEee
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDE----NGTNRIVLAKD-----------NITQPRGMM--LDPSPGTRWLFWTD 212 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~----~G~~~~~l~~~-----------~~~~p~~ia--~d~~~g~~~ly~td 212 (461)
.+..+++.+ .++++++-..++.|.+.++ .|.....+... .-.....++ ..+... .|+...
T Consensus 113 ~v~~~~~~~-~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~ 189 (437)
T 3gre_A 113 TVTQITMIP-NFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKS--LLVALT 189 (437)
T ss_dssp CEEEEEECT-TSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCE--EEEEEE
T ss_pred CEEEEEEeC-CCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCC--EEEEEe
Confidence 456677775 4455556566788888876 44433222111 111122233 223322 444433
Q ss_pred cCCCCcEEEEecCCCCcEEEEec--ccccceeEEeeccCCeeEEecCC
Q psy17325 213 WGENPRIERIGMDGSNRSTIIST--KIYWPNGLTLDIATRRVYFADSK 258 (461)
Q Consensus 213 ~~~~~~I~~~~~dG~~~~~i~~~--~~~~P~glavD~~~~~ly~~d~~ 258 (461)
....|...++........+.. .......+++++.+..|+.+...
T Consensus 190 --~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d 235 (437)
T 3gre_A 190 --NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR 235 (437)
T ss_dssp --TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT
T ss_pred --CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC
Confidence 446777777765443333332 34567889998876666655443
No 378
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=90.01 E-value=0.09 Score=44.30 Aligned_cols=43 Identities=21% Similarity=0.304 Sum_probs=22.0
Q ss_pred CCCCcccCCCCCCCCCceeCCCCceEeCCCCCeecCCCCceecCcce
Q psy17325 28 CDLAECKHKFGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC 74 (461)
Q Consensus 28 C~~~~C~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~d~~eC 74 (461)
|+...|.++.+.-...|....++|.|.|++||. +..|+.+.+|
T Consensus 117 Ce~~~~~~~~C~~~g~C~~~~~~~~c~C~~g~~----g~~C~~~~~c 159 (164)
T 3cfw_A 117 CYTASCQPWSCSGHGECVEIINNYTCNCDVGYY----GPQCQFVQVD 159 (164)
T ss_dssp EEECCCCTTSSCSSEEEEEETTEEEEEECTTCB----SSSSCBC---
T ss_pred EccCCCCCCcCCCCCeecccCCCceeeeCCCcc----cccccccccC
Confidence 444445443211123466666677777777774 4566666666
No 379
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=89.94 E-value=2.7 Score=43.05 Aligned_cols=114 Identities=14% Similarity=0.212 Sum_probs=62.2
Q ss_pred eeeEEEeccCCeEEEeecCceeeEEEe----e------cCCCCceEEEeecCCCe-------EEEe--------------
Q psy17325 315 YEALALDLENGMLYYSTLKCTRWLFWT----D------WGENPRIERIGMDGSNR-------STII-------------- 363 (461)
Q Consensus 315 p~~iavd~~~~~lY~t~~~~~~~l~~~----d------~~~~~~I~~~~~dG~~~-------~~l~-------------- 363 (461)
|++++++|.++.||++-+...... +. + -...+.|+|...++... ..++
T Consensus 386 pEgi~~~p~~g~vY~a~Tn~~~rg-~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~~~~ 464 (592)
T 3zwu_A 386 PEWIVVSPKDGQVYCTLTNNAKRG-EDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTPKG 464 (592)
T ss_dssp EEEEEECTTTCCEEEEECCBTTTT-STTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSGGG
T ss_pred cceeEEcCCCCEEEEEecCCcccc-cCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccccccc
Confidence 999999999999999866411000 00 0 00124577776543221 1111
Q ss_pred -------eCCCCCceeEEEecCCCeEEEE-cCC-----------CCeEEEEEecCCCCeEEEEEccccceeeccCCCCCc
Q psy17325 364 -------STKIYWPNGLTLDIATRRVYFA-DSK-----------LDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGV 424 (461)
Q Consensus 364 -------~~~l~~p~glaiD~~~~~ly~~-d~~-----------~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~ 424 (461)
...+..|.+|++| ..++||++ |.. ++.+...+.. +|.....+. ...+.. .
T Consensus 465 ~~~~~~~~~~f~~PDNL~fd-~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~-~g~~~rf~~-~P~gaE--------~ 533 (592)
T 3zwu_A 465 GSSNITPQNMFNSPDGLGFD-KAGRLWILTDGDSSNAGDFAGMGNNQMLCADPA-TGEIRRFMV-GPIGCE--------V 533 (592)
T ss_dssp CCTTCCTTTCCCCEEEEEEC-TTCCEEEEECCCCCCSGGGTTTCSCEEEEECTT-TCCEEEEEE-CCTTCE--------E
T ss_pred cccccCCCCCccCCcceEEC-CCCCEEEEecCCCcccccccccccceEEEEeCC-CCeEEEEEe-CCCCcc--------C
Confidence 0237789999999 45778886 432 3455655552 454433332 211111 1
Q ss_pred ceEEEeeeCCEEEEEe
Q psy17325 425 PALALDLENGMLYYST 440 (461)
Q Consensus 425 ~~~~l~~~~~~lYwtd 440 (461)
.+..++.++..||+.-
T Consensus 534 TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 534 TGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEECTTSSEEEEEE
T ss_pred cCeeECCCCCEEEEEE
Confidence 2455556677888863
No 380
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=89.26 E-value=0.032 Score=37.19 Aligned_cols=40 Identities=23% Similarity=0.551 Sum_probs=24.0
Q ss_pred ceEeCCCCCeecCCCCceecCcceecCCcccCceee----ccCCccccCCCCeeeeCCCCce
Q psy17325 51 ALCTCPPGEILSNDSVTCQDMNECEQPGYCSQMCTN----TKGSYICSCNEGYVLEYDNHTC 108 (461)
Q Consensus 51 ~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~~C~~----~~g~~~C~C~~g~~l~~~~~~C 108 (461)
+.|.|++||. .+.|.+.+ .|.+ ..++|.|.|++||. +..|
T Consensus 3 ~~C~C~~g~~----------~~pC~NGG----tC~~~~~~~~~~y~C~C~~Gf~----G~~C 46 (52)
T 3ca7_A 3 PTYKCPETFD----------AWYCLNDA----HCFAVKIADLPVYSCECAIGFM----GQRC 46 (52)
T ss_dssp CCBCCCHHHH----------HHTSCTTC----EEEEEEETTEEEEEEECCTTEE----STTS
T ss_pred eeeECCCCCc----------CCcCCCCC----EEecCccCCCCCEEEECCCCCc----CCCC
Confidence 4678888874 12333222 3443 34578899999885 4555
No 381
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=89.26 E-value=13 Score=33.92 Aligned_cols=74 Identities=8% Similarity=-0.025 Sum_probs=42.2
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCC
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~ 228 (461)
.+..+++.+.+. +.++-..++.|...+...................+...+... .|+... ....+...++.+..
T Consensus 88 ~V~~~~~s~dg~-~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~s~s--~d~~~~~~d~~~~~ 161 (340)
T 4aow_A 88 FVSDVVISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR--QIVSGS--RDKTIKLWNTLGVC 161 (340)
T ss_dssp CEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSS--CEEEEE--TTSCEEEECTTSCE
T ss_pred CEEEEEECCCCC-EEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCc--cceeec--CCCeEEEEEeCCCc
Confidence 456677765444 444445567888888777665555444444566666666655 555443 23455555555443
No 382
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=88.88 E-value=13 Score=33.39 Aligned_cols=197 Identities=8% Similarity=-0.001 Sum_probs=95.8
Q ss_pred cceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCc---EEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecC
Q psy17325 149 DLVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN---RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD 225 (461)
Q Consensus 149 ~~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~---~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~d 225 (461)
..+..+++.+.+..|+ +-..++.|.+.++.... ....+.........++++. + .|+.+. ....|...+ .
T Consensus 60 ~~v~~~~~~~~~~~l~-~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~--~l~~~~--~d~~i~~~d-~ 131 (313)
T 3odt_A 60 GFLNSVCYDSEKELLL-FGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQD--G--VVISGS--WDKTAKVWK-E 131 (313)
T ss_dssp SCEEEEEEETTTTEEE-EEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEET--T--EEEEEE--TTSEEEEEE-T
T ss_pred ccEEEEEECCCCCEEE-EecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEecC--C--EEEEEe--CCCCEEEEc-C
Confidence 4566788887555444 44456788877755432 1112222334466777753 3 555554 334666655 2
Q ss_pred CCCcEEEEecccccceeEEeec-cCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCC
Q psy17325 226 GSNRSTIISTKIYWPNGLTLDI-ATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGS 304 (461)
Q Consensus 226 G~~~~~i~~~~~~~P~glavD~-~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~ 304 (461)
+... ..+.........+++.+ ..+.|+.+.. .+ .|...+ .+.
T Consensus 132 ~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~----------------------------------~i~i~d-~~~ 174 (313)
T 3odt_A 132 GSLV-YNLQAHNASVWDAKVVSFSENKFLTASA-DK----------------------------------TIKLWQ-NDK 174 (313)
T ss_dssp TEEE-EEEECCSSCEEEEEEEETTTTEEEEEET-TS----------------------------------CEEEEE-TTE
T ss_pred CcEE-EecccCCCceeEEEEccCCCCEEEEEEC-CC----------------------------------CEEEEe-cCc
Confidence 2211 22222334455677665 3444444333 22 233333 111
Q ss_pred ceEEEEe-CCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeE
Q psy17325 305 NASILVS-GQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382 (461)
Q Consensus 305 ~~~~l~~-~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~l 382 (461)
....+.. ... ...+++.|.+. |+ +-.. .+.|...++........+...-.....|++.+.+ +|
T Consensus 175 ~~~~~~~~~~~~i~~~~~~~~~~-~~-~~~~------------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l 239 (313)
T 3odt_A 175 VIKTFSGIHNDVVRHLAVVDDGH-FI-SCSN------------DGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DI 239 (313)
T ss_dssp EEEEECSSCSSCEEEEEEEETTE-EE-EEET------------TSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CE
T ss_pred eEEEEeccCcccEEEEEEcCCCe-EE-EccC------------CCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CE
Confidence 1111111 111 67788876544 33 3222 3455555554332222222444567788887554 55
Q ss_pred EEEcCCCCeEEEEEecCCCCeEEEE
Q psy17325 383 YFADSKLDFIDFCNYDGTGRQQVIL 407 (461)
Q Consensus 383 y~~d~~~~~I~~~~~~g~g~~~~~~ 407 (461)
+.+ ...+.|...++. ++.....+
T Consensus 240 ~~~-~~dg~v~iwd~~-~~~~~~~~ 262 (313)
T 3odt_A 240 VSC-GEDRTVRIWSKE-NGSLKQVI 262 (313)
T ss_dssp EEE-ETTSEEEEECTT-TCCEEEEE
T ss_pred EEE-ecCCEEEEEECC-CCceeEEE
Confidence 544 456788888873 45544443
No 383
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=88.69 E-value=17 Score=34.71 Aligned_cols=70 Identities=7% Similarity=-0.062 Sum_probs=42.3
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCC---C--cE-EEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEe
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENG---T--NR-IVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIG 223 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G---~--~~-~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~ 223 (461)
.+..+++.+..+.++++-..++.|.+.++.. . .. ..... .-.....|++.|... .|+.+. ....|...+
T Consensus 65 ~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~--~l~s~s--~dg~i~vwd 139 (437)
T 3gre_A 65 SITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYD-CSSTVTQITMIPNFD--AFAVSS--KDGQIIVLK 139 (437)
T ss_dssp CEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEE-CSSCEEEEEECTTSS--EEEEEE--TTSEEEEEE
T ss_pred ceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeecc-CCCCEEEEEEeCCCC--EEEEEe--CCCEEEEEE
Confidence 4567777763556667777788999988654 1 11 11111 224578899998755 666554 334555555
Q ss_pred c
Q psy17325 224 M 224 (461)
Q Consensus 224 ~ 224 (461)
+
T Consensus 140 ~ 140 (437)
T 3gre_A 140 V 140 (437)
T ss_dssp E
T ss_pred e
Confidence 5
No 384
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=88.57 E-value=23 Score=35.98 Aligned_cols=111 Identities=15% Similarity=0.077 Sum_probs=57.7
Q ss_pred eeEEEeccCCeEEEeecCceeeEEEe---------------------ec----CCCCceEEEeec-CCCeEEEeeCCCCC
Q psy17325 316 EALALDLENGMLYYSTLKCTRWLFWT---------------------DW----GENPRIERIGMD-GSNRSTIISTKIYW 369 (461)
Q Consensus 316 ~~iavd~~~~~lY~t~~~~~~~l~~~---------------------d~----~~~~~I~~~~~d-G~~~~~l~~~~l~~ 369 (461)
.++++||.++.||+.... ....++. .. ...+.|...++. |+.+-.+- .. ..
T Consensus 389 ~~~a~dp~~g~~yv~~~~-~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~-~~-~~ 465 (571)
T 2ad6_A 389 GVDSYDPESRTLYAGLNH-ICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKW-EK-FA 465 (571)
T ss_dssp CBCEEETTTTEEEEEEEC-EEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEE-ES-SC
T ss_pred CCceECCCCCEEEEEchh-ccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEec-CC-CC
Confidence 468999999999997542 1111110 00 012456655543 33322222 11 12
Q ss_pred ceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeC
Q psy17325 370 PNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTE 441 (461)
Q Consensus 370 p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~ 441 (461)
+.+.++...++.||+.. ..+.|..++.. +|..+-.+....... ..|+.+ ..++++|+...
T Consensus 466 ~~~~~~~t~gg~v~~g~-~dg~l~a~D~~-tG~~lw~~~~~~~~~---------~~p~~~-~~~G~~yv~~~ 525 (571)
T 2ad6_A 466 AWGGTLYTKGGLVWYAT-LDGYLKALDNK-DGKELWNFKMPSGGI---------GSPMTY-SFKGKQYIGSM 525 (571)
T ss_dssp CCSBCEEETTTEEEEEC-TTSEEEEEETT-TCCEEEEEECSSCCC---------SCCEEE-EETTEEEEEEE
T ss_pred ccceeEEECCCEEEEEc-CCCeEEEEECC-CCCEEEEEeCCCCcE---------eeeEEE-EECCEEEEEEE
Confidence 23333333678999874 46789999983 677654333221111 123433 35788888654
No 385
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=88.33 E-value=0.24 Score=45.99 Aligned_cols=40 Identities=40% Similarity=0.990 Sum_probs=32.2
Q ss_pred cCcceecC----CcccCceeeccCCccccCCCCeeeeCCCCcee
Q psy17325 70 DMNECEQP----GYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109 (461)
Q Consensus 70 d~~eC~~~----~~C~~~C~~~~g~~~C~C~~g~~l~~~~~~C~ 109 (461)
+.++|..+ ..|++.|.+..+++.|.|.+||.|..+...|.
T Consensus 119 ~~~~C~~~~~~~~~c~~~C~n~~g~~~csC~~Gy~L~~d~~~C~ 162 (286)
T 1nt0_A 119 DVDECRTSLGDSVPCDHYCHXYLGGYYCSCRVGYILHQNKHTCS 162 (286)
T ss_dssp ECCTTC-------CCSSEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred cCCccCCCCCCcccCCCccccccCceEeecCCCceeccCCCCcc
Confidence 34566532 35999999999999999999999999888885
No 386
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=87.92 E-value=0.2 Score=32.32 Aligned_cols=35 Identities=29% Similarity=0.869 Sum_probs=22.6
Q ss_pred Ccceec--CCcccC-ceeecc--CCccccCCCCeeeeCCCCcee
Q psy17325 71 MNECEQ--PGYCSQ-MCTNTK--GSYICSCNEGYVLEYDNHTCK 109 (461)
Q Consensus 71 ~~eC~~--~~~C~~-~C~~~~--g~~~C~C~~g~~l~~~~~~C~ 109 (461)
+++|.. ..+|.+ .|.... ++|.|.|++||. +..|.
T Consensus 3 i~~C~~~~~~pC~nG~C~~~~~~~~~~C~C~~Gyt----G~~Ce 42 (46)
T 1k36_A 3 ITKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYT----GVRCE 42 (46)
T ss_dssp EECCCTTCCSSCSSEEEEEETTTTEEEEEECTTCS----STTSC
T ss_pred cccCCCCCCCCCCCCEeeccCCCCCEEEECCCCCc----cCCCC
Confidence 455542 145543 677654 689999999994 66663
No 387
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=87.86 E-value=19 Score=34.30 Aligned_cols=102 Identities=10% Similarity=0.065 Sum_probs=59.3
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCC-CCcEEEE-------ecCCCCCceeEEEcCCC-CceEEEEeecCCCCcEE
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDEN-GTNRIVL-------AKDNITQPRGMMLDPSP-GTRWLFWTDWGENPRIE 220 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~-G~~~~~l-------~~~~~~~p~~ia~d~~~-g~~~ly~td~~~~~~I~ 220 (461)
.+..+++.+.+ +++.+- .++.|.+.+++ +.....+ +...-.....++++|.. . .|+... ....|.
T Consensus 179 ~v~~~~~~~~~-~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~--~l~s~~--~dg~i~ 252 (447)
T 3dw8_B 179 HINSISINSDY-ETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCN--TFVYSS--SKGTIR 252 (447)
T ss_dssp CCCEEEECTTS-SEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTT--EEEEEE--TTSCEE
T ss_pred ceEEEEEcCCC-CEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCc--EEEEEe--CCCeEE
Confidence 35567777644 444454 68999999988 3322222 12223457899999986 4 455444 345777
Q ss_pred EEecCCCCc----EEEEecccc------------cceeEEeeccCCeeEEecC
Q psy17325 221 RIGMDGSNR----STIISTKIY------------WPNGLTLDIATRRVYFADS 257 (461)
Q Consensus 221 ~~~~dG~~~----~~i~~~~~~------------~P~glavD~~~~~ly~~d~ 257 (461)
..++..... ...+..... ....+++.+.+..|..+..
T Consensus 253 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 305 (447)
T 3dw8_B 253 LCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY 305 (447)
T ss_dssp EEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES
T ss_pred EEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC
Confidence 777764432 223322221 5678899886666665544
No 388
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=87.49 E-value=21 Score=34.32 Aligned_cols=94 Identities=12% Similarity=0.059 Sum_probs=53.1
Q ss_pred eeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEE
Q psy17325 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRST 231 (461)
Q Consensus 152 ~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~ 231 (461)
..++++ +++.++-..++.|.+.++........+...-.....+++++ + .|+... ....|...++.......
T Consensus 163 ~~~~~~---~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~--~--~l~s~s--~dg~i~~wd~~~~~~~~ 233 (445)
T 2ovr_B 163 WSSQMR---DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--K--RVVSGS--RDATLRVWDIETGQCLH 233 (445)
T ss_dssp EEEEEE---TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET--T--EEEEEE--TTSEEEEEESSSCCEEE
T ss_pred EEEEec---CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecC--C--EEEEEe--CCCEEEEEECCCCcEEE
Confidence 444553 45666667788999999876554444443334566777764 3 555544 34677777776544333
Q ss_pred EEecccccceeEEeeccCCeeEEec
Q psy17325 232 IISTKIYWPNGLTLDIATRRVYFAD 256 (461)
Q Consensus 232 i~~~~~~~P~glavD~~~~~ly~~d 256 (461)
.+.........+++| ++.|+.+.
T Consensus 234 ~~~~~~~~v~~~~~~--~~~l~~~~ 256 (445)
T 2ovr_B 234 VLMGHVAAVRCVQYD--GRRVVSGA 256 (445)
T ss_dssp EEECCSSCEEEEEEC--SSCEEEEE
T ss_pred EEcCCcccEEEEEEC--CCEEEEEc
Confidence 333333345556663 44554444
No 389
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=87.15 E-value=0.26 Score=51.49 Aligned_cols=68 Identities=25% Similarity=0.585 Sum_probs=43.6
Q ss_pred CCCC--CCcccCCC-CCCCC--CceeCCCCceEeCCCCCeecCCCCcee---cCcceecC--CcccC--ceeeccCCccc
Q psy17325 26 PGCD--LAECKHKF-GLCSN--TCHPTPLGALCTCPPGEILSNDSVTCQ---DMNECEQP--GYCSQ--MCTNTKGSYIC 93 (461)
Q Consensus 26 ~~C~--~~~C~~~~-~~C~~--~C~~~~~~~~C~C~~G~~l~~~~~~C~---d~~eC~~~--~~C~~--~C~~~~g~~~C 93 (461)
..|+ .++|.... ..|.+ .|.+ +.|.|++||. |..|+ ++++|... ..|++ .|.+ ..|
T Consensus 519 ~~Ce~~~~~C~~~~~~~C~~~G~C~~----g~C~C~~Gy~----G~~CeC~~~~~~C~~~~g~~C~~~G~C~~----g~C 586 (690)
T 3fcs_B 519 KYCECDDFSCVRYKGEMCSGHGQCSC----GDCLCDSDWT----GYYCNCTTRTDTCMSSNGLLCSGRGKCEC----GSC 586 (690)
T ss_dssp TTSCBCSSCCCBSSSSBGGGSEEEET----TEEEECTTEE----SSSSCEECCCTTTBCTTSSBTSSSCEEET----TEE
T ss_pred CCcCcccCcCcCCCCCCCCCCCEecC----CeeECcCCCc----CCCCccCCCCCcccCCCCCCCCCCCEEeC----CEE
Confidence 5664 56676421 34643 4654 7899999996 56676 56778632 35753 6754 289
Q ss_pred cC-CCCeeeeCCCCcee
Q psy17325 94 SC-NEGYVLEYDNHTCK 109 (461)
Q Consensus 94 ~C-~~g~~l~~~~~~C~ 109 (461)
.| ++||. +..|.
T Consensus 587 ~C~~~Gy~----G~~Ce 599 (690)
T 3fcs_B 587 VCIQPGSY----GDTCE 599 (690)
T ss_dssp ECCSTTCB----STTSC
T ss_pred ECCCCCcc----CCCcC
Confidence 99 99995 45553
No 390
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=86.97 E-value=0.19 Score=54.74 Aligned_cols=27 Identities=33% Similarity=0.907 Sum_probs=24.6
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCCCCCC
Q psy17325 2 ADRCVNLTKVCDGKTDCPNGADEGPGCD 29 (461)
Q Consensus 2 ~~~Ci~~~~~Cd~~~dC~dg~de~~~C~ 29 (461)
+|+||+..|+|||..||.|++|| ..|.
T Consensus 127 ~g~ci~~~~~c~g~~dC~d~sde-~~C~ 153 (913)
T 3t5o_A 127 SGRCIARKLECNGENDCGDNSDE-RDCG 153 (913)
T ss_dssp TSCEEEGGGSSSSSCCSSSSGGG-TTCS
T ss_pred CCceEccceecCCcccCCCcccc-ccCC
Confidence 58999999999999999999999 5674
No 391
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=86.68 E-value=0.049 Score=49.64 Aligned_cols=54 Identities=13% Similarity=-0.002 Sum_probs=36.6
Q ss_pred CCceeCCCCceEeCCCCCeecCCCCceec-CcceecCCcccCceeeccCCccccCCCCe
Q psy17325 42 NTCHPTPLGALCTCPPGEILSNDSVTCQD-MNECEQPGYCSQMCTNTKGSYICSCNEGY 99 (461)
Q Consensus 42 ~~C~~~~~~~~C~C~~G~~l~~~~~~C~d-~~eC~~~~~C~~~C~~~~g~~~C~C~~g~ 99 (461)
..|++..++|+|.||+||. +..|+. ++||..+..|...+-+..+.+.|.|..++
T Consensus 178 g~C~dg~~~y~C~Cp~Gf~----G~~c~~~i~ec~~~~~c~~~~c~~gG~~~~~C~~g~ 232 (267)
T 4fbr_A 178 GKTLSGTMTYNGEGPIGFR----GTLTSPDTYTVENQWGGSTAPWNPGGFWMIGARNGQ 232 (267)
T ss_dssp TSEEEEEEEETTSCCEEEE----EEEEETTEEEEEEECSCTTSCCEEEEEEECCCCTTC
T ss_pred CEeeCCCCCeEEeCCCCcc----ccccccccceeccCCCccCCcccCCCeEEEecCCCC
Confidence 4688888999999999996 467764 56665444455444344455666676665
No 392
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=86.55 E-value=33 Score=35.62 Aligned_cols=17 Identities=18% Similarity=0.425 Sum_probs=13.9
Q ss_pred eEEeeccCCeeEEecCC
Q psy17325 242 GLTLDIATRRVYFADSK 258 (461)
Q Consensus 242 glavD~~~~~ly~~d~~ 258 (461)
.+++|+..+.||+....
T Consensus 247 ~~~~d~~~~~vy~~~~~ 263 (677)
T 1kb0_A 247 SMTFDAELNTMYVGTGN 263 (677)
T ss_dssp CEEEETTTTEEEEECCC
T ss_pred ceeEcCCCCEEEEECCC
Confidence 57899999999987654
No 393
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=86.26 E-value=22 Score=33.36 Aligned_cols=197 Identities=10% Similarity=0.059 Sum_probs=98.9
Q ss_pred ceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeee
Q psy17325 194 PRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNV 273 (461)
Q Consensus 194 p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v 273 (461)
++.+++.|... +|..+.-.....|...++........+. .-.....|++.+.++.|..+.... +
T Consensus 136 ~~~v~fSpDg~--~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~--~----------- 199 (365)
T 4h5i_A 136 TKLVYISREGT--VAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSS--L----------- 199 (365)
T ss_dssp EEEEEECTTSS--CEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSC--E-----------
T ss_pred EEEEEEcCCCC--EEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecccee--E-----------
Confidence 67899999866 7776552233567666766433322222 234577899988777666554322 1
Q ss_pred ccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEE
Q psy17325 274 NYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERI 352 (461)
Q Consensus 274 ~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~ 352 (461)
.++|...+. .+......+ ... .+.+++.|.+..|..+... .+....|...
T Consensus 200 -------~~~~~~~~~-----~~~~~~~~~--------~~~~v~~v~fspdg~~l~~~s~d---------~~~~~~i~~~ 250 (365)
T 4h5i_A 200 -------EVISTVTGS-----CIARKTDFD--------KNWSLSKINFIADDTVLIAASLK---------KGKGIVLTKI 250 (365)
T ss_dssp -------EEEETTTCC-----EEEEECCCC--------TTEEEEEEEEEETTEEEEEEEES---------SSCCEEEEEE
T ss_pred -------EEEEeccCc-----ceeeeecCC--------CCCCEEEEEEcCCCCEEEEEecC---------CcceeEEeec
Confidence 122222211 111111111 111 6678888766655543322 0001123333
Q ss_pred eecCCCeEE----EeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEE
Q psy17325 353 GMDGSNRST----IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALA 428 (461)
Q Consensus 353 ~~dG~~~~~----l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (461)
++....... .+.........|++.+++..|..+ ...+.|...++. +|.....+...... +..+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasg-s~D~~V~iwd~~-~~~~~~~~~~gH~~-----------~V~~ 317 (365)
T 4h5i_A 251 SIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLA-SNDNSIALVKLK-DLSMSKIFKQAHSF-----------AITE 317 (365)
T ss_dssp EEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEE-ETTSCEEEEETT-TTEEEEEETTSSSS-----------CEEE
T ss_pred ccccceecceeeeeecCCCCCeEeEEECCCCCceEEE-cCCCEEEEEECC-CCcEEEEecCcccC-----------CEEE
Confidence 332222211 122344556788998665555544 445678888882 45443333322211 1345
Q ss_pred Eeee-CCEEEEEeCCCceeec
Q psy17325 429 LDLE-NGMLYYSTEGAEFLKT 448 (461)
Q Consensus 429 l~~~-~~~lYwtd~~~~~i~~ 448 (461)
|++. ++.+..|-...++||+
T Consensus 318 v~fSpdg~~laS~S~D~tvrv 338 (365)
T 4h5i_A 318 VTISPDSTYVASVSAANTIHI 338 (365)
T ss_dssp EEECTTSCEEEEEETTSEEEE
T ss_pred EEECCCCCEEEEEeCCCeEEE
Confidence 5554 3566677777888865
No 394
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=85.85 E-value=0.37 Score=44.40 Aligned_cols=40 Identities=45% Similarity=1.042 Sum_probs=32.8
Q ss_pred cCcceec----CCcccCceeeccCCccccCCCCeeeeCCCCcee
Q psy17325 70 DMNECEQ----PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCK 109 (461)
Q Consensus 70 d~~eC~~----~~~C~~~C~~~~g~~~C~C~~g~~l~~~~~~C~ 109 (461)
+.++|.. ...|.+.|.+..+++.|.|.+||.+..+.+.|.
T Consensus 120 ~~~~C~~~~~~~~~c~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~ 163 (278)
T 3dem_A 120 DVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCR 163 (278)
T ss_dssp ECCTTTC-----CCCSSEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred ccccCCCCCCCcccCCcCcCCccCCcEEEeCCcceeccCCCCCc
Confidence 4556652 237999999999999999999999998888885
No 395
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=85.83 E-value=0.34 Score=49.36 Aligned_cols=37 Identities=16% Similarity=0.229 Sum_probs=28.8
Q ss_pred CCcccCCCCCCCCCcee-CCCCceEeCC-CCCeecCCCCceec
Q psy17325 30 LAECKHKFGLCSNTCHP-TPLGALCTCP-PGEILSNDSVTCQD 70 (461)
Q Consensus 30 ~~~C~~~~~~C~~~C~~-~~~~~~C~C~-~G~~l~~~~~~C~d 70 (461)
.++|.+++++....|.+ ..++|.|.|+ +||. |..|+.
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce~ 40 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYS----GPNCTI 40 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEE----TTTTCE
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcC----CCCCCC
Confidence 36787766444567999 8899999999 9996 678863
No 396
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=84.18 E-value=42 Score=34.79 Aligned_cols=35 Identities=23% Similarity=0.103 Sum_probs=24.1
Q ss_pred eeEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEE
Q psy17325 371 NGLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVIL 407 (461)
Q Consensus 371 ~glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~ 407 (461)
.+.++...++.||+. ...+.+..++.. +|...-.+
T Consensus 480 ~~g~~~~~g~~v~~g-~~dg~l~a~D~~-tG~~lw~~ 514 (677)
T 1kb0_A 480 NGGTLTTAGNVVFQG-TADGRLVAYHAA-TGEKLWEA 514 (677)
T ss_dssp CCCEEEETTTEEEEE-CTTSEEEEEETT-TCCEEEEE
T ss_pred cCcceEeCCCEEEEE-CCCCcEEEEECC-CCceeeee
Confidence 444555478888887 567899999983 67765444
No 397
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=83.00 E-value=0.52 Score=48.18 Aligned_cols=36 Identities=17% Similarity=0.293 Sum_probs=27.0
Q ss_pred CcccCCCCCCCCCcee-CCCCceEeCC-CCCeecCCCCceec
Q psy17325 31 AECKHKFGLCSNTCHP-TPLGALCTCP-PGEILSNDSVTCQD 70 (461)
Q Consensus 31 ~~C~~~~~~C~~~C~~-~~~~~~C~C~-~G~~l~~~~~~C~d 70 (461)
++|.+++++....|.. ..++|.|.|+ +||. |..|+.
T Consensus 2 d~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce~ 39 (587)
T 3nt1_A 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFY----GENCTT 39 (587)
T ss_dssp CTTTTCCCCTTCEEEEEETTEEEEECTTSSEE----TTTTCE
T ss_pred CCCCCCCCCCCCEeeCCCCCCeEEecCCCCcc----CCCCCC
Confidence 5777666555567985 4588999999 9996 678863
No 398
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=82.88 E-value=34 Score=32.75 Aligned_cols=88 Identities=8% Similarity=-0.008 Sum_probs=48.2
Q ss_pred CeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEecccccc
Q psy17325 161 GHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWP 240 (461)
Q Consensus 161 ~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~~~~~P 240 (461)
++..++-..++.|.+.++........+.........+++++ + .|+.+. ....|...++........+.......
T Consensus 129 g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~--~--~l~s~~--~dg~i~vwd~~~~~~~~~~~~h~~~v 202 (445)
T 2ovr_B 129 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD--N--IIISGS--TDRTLKVWNAETGECIHTLYGHTSTV 202 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEET--T--EEEEEE--TTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred CCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecC--C--EEEEEe--CCCeEEEEECCcCcEEEEECCCCCcE
Confidence 45555666688999999765444433443334566777763 3 555544 34677777776443322222222334
Q ss_pred eeEEeeccCCeeEEec
Q psy17325 241 NGLTLDIATRRVYFAD 256 (461)
Q Consensus 241 ~glavD~~~~~ly~~d 256 (461)
..++++ .+.|+.+.
T Consensus 203 ~~~~~~--~~~l~s~s 216 (445)
T 2ovr_B 203 RCMHLH--EKRVVSGS 216 (445)
T ss_dssp EEEEEE--TTEEEEEE
T ss_pred EEEEec--CCEEEEEe
Confidence 556664 44554443
No 399
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=82.74 E-value=0.74 Score=42.33 Aligned_cols=40 Identities=38% Similarity=0.725 Sum_probs=31.2
Q ss_pred CCcccCC---CCCCCCCceeCCCCceEeCCCCCeecCCCCcee
Q psy17325 30 LAECKHK---FGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ 69 (461)
Q Consensus 30 ~~~C~~~---~~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~ 69 (461)
.++|... +..|.+.|.+..+++.|.|.+||.+..+...|.
T Consensus 121 ~~~C~~~~~~~~~c~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~ 163 (278)
T 3dem_A 121 VDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCR 163 (278)
T ss_dssp CCTTTC-----CCCSSEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred cccCCCCCCCcccCCcCcCCccCCcEEEeCCcceeccCCCCCc
Confidence 3456533 247888999999999999999999988777775
No 400
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=82.35 E-value=30 Score=31.81 Aligned_cols=73 Identities=11% Similarity=0.050 Sum_probs=46.0
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCC
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~ 227 (461)
.+..+++.+. +.+.++-..++.|.+.++........+...-.....+++.|... +|+-+. ....|...++.+.
T Consensus 78 ~V~~~~~~~~-~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~--~l~s~~--~d~~i~~wd~~~~ 150 (343)
T 2xzm_R 78 FVSDLALSQE-NCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNR--QILSAG--AEREIKLWNILGE 150 (343)
T ss_dssp CEEEEEECSS-TTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTT--EEEEEE--TTSCEEEEESSSC
T ss_pred ceEEEEECCC-CCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCC--EEEEEc--CCCEEEEEeccCC
Confidence 3456777653 44555666788999999764443333333335678899999866 666554 3456777777643
No 401
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=81.74 E-value=0.7 Score=42.74 Aligned_cols=39 Identities=33% Similarity=0.753 Sum_probs=29.5
Q ss_pred CcccCCC---CCCCCCceeCCCCceEeCCCCCeecCCCCcee
Q psy17325 31 AECKHKF---GLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ 69 (461)
Q Consensus 31 ~~C~~~~---~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~ 69 (461)
++|...+ ..|.+.|.+..+++.|.|.+||.+..+...|.
T Consensus 121 ~~C~~~~~~~~~c~~~C~n~~g~~~csC~~Gy~L~~d~~~C~ 162 (286)
T 1nt0_A 121 DECRTSLGDSVPCDHYCHXYLGGYYCSCRVGYILHQNKHTCS 162 (286)
T ss_dssp CTTC-------CCSSEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred CccCCCCCCcccCCCccccccCceEeecCCCceeccCCCCcc
Confidence 4565322 35888999999999999999999987777764
No 402
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=81.41 E-value=0.57 Score=39.10 Aligned_cols=34 Identities=32% Similarity=0.775 Sum_probs=25.7
Q ss_pred Cccc--CceeeccCCccccCCCCeeeeCCCCceeeccccc
Q psy17325 78 GYCS--QMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA 115 (461)
Q Consensus 78 ~~C~--~~C~~~~g~~~C~C~~g~~l~~~~~~C~~~~~~~ 115 (461)
..|. ..|.+..++|.|.|++||. +..|..+++|.
T Consensus 125 ~~C~~~g~C~~~~~~~~c~C~~g~~----G~~Ce~~~~c~ 160 (162)
T 1g1s_A 125 MSCSKQGECLETIGNYTCSCYPGFY----GPECEYVRDDD 160 (162)
T ss_dssp TGGGGSEEEEECSSSEEEEECTTEE----STTSCEECC--
T ss_pred CCCCCCCEEecCCCCceEeCCCCCc----CcccccCcccC
Confidence 3564 3799999999999999996 56787776654
No 403
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=81.08 E-value=64 Score=34.69 Aligned_cols=151 Identities=6% Similarity=-0.026 Sum_probs=82.4
Q ss_pred CCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEecccccceeEEeeccCCeeEEecCCCceeeecccceee
Q psy17325 192 TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKT 271 (461)
Q Consensus 192 ~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~ 271 (461)
.....||++|... +|.... ....|...+..+.... .....-.....|++.+ ++.|.-+....
T Consensus 18 ~~V~~lafspdg~--~lAsgs--~Dg~I~lw~~~~~~~~-~~~~~~~~V~~l~fsp-g~~L~S~s~D~------------ 79 (902)
T 2oaj_A 18 SKPIAAAFDFTQN--LLAIAT--VTGEVHIYGQQQVEVV-IKLEDRSAIKEMRFVK-GIYLVVINAKD------------ 79 (902)
T ss_dssp SCEEEEEEETTTT--EEEEEE--TTSEEEEECSTTCEEE-EECSSCCCEEEEEEET-TTEEEEEETTC------------
T ss_pred CCcEEEEECCCCC--EEEEEe--CCCEEEEEeCCCcEEE-EEcCCCCCEEEEEEcC-CCEEEEEECcC------------
Confidence 4578899999866 665554 3356766666543221 1112223467888887 55455444332
Q ss_pred eeccceeeeEEEEEecCCCCcceeeeEEeCCCCc-eEEEEeCCeeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceE
Q psy17325 272 NVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN-ASILVSGQLYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIE 350 (461)
Q Consensus 272 ~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~-~~~l~~~~~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~ 350 (461)
.|..-++.... ...+........++++|.+..|+..... +.|.
T Consensus 80 -----------------------~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~d-------------g~V~ 123 (902)
T 2oaj_A 80 -----------------------TVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQN-------------GSMI 123 (902)
T ss_dssp -----------------------EEEEEETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETT-------------SCEE
T ss_pred -----------------------eEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCC-------------CcEE
Confidence 35555554332 2223222227788999888877765443 3444
Q ss_pred EEeecCCCeEEEe-----------eCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEe
Q psy17325 351 RIGMDGSNRSTII-----------STKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397 (461)
Q Consensus 351 ~~~~dG~~~~~l~-----------~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~ 397 (461)
..++++.....+. .........|++.+.++.+..+-...+.| ..++
T Consensus 124 lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~ 180 (902)
T 2oaj_A 124 VYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSL 180 (902)
T ss_dssp EEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEET
T ss_pred EEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEEC
Confidence 4444433221110 12234567888887655444454556777 7777
No 404
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=80.94 E-value=0.4 Score=50.04 Aligned_cols=68 Identities=29% Similarity=0.758 Sum_probs=41.3
Q ss_pred CCCC--CCcccCC-CCCCCC----CceeCCCCceEeCCCCCeecCCCCcee---cCcceecC--CcccC--ceeeccCCc
Q psy17325 26 PGCD--LAECKHK-FGLCSN----TCHPTPLGALCTCPPGEILSNDSVTCQ---DMNECEQP--GYCSQ--MCTNTKGSY 91 (461)
Q Consensus 26 ~~C~--~~~C~~~-~~~C~~----~C~~~~~~~~C~C~~G~~l~~~~~~C~---d~~eC~~~--~~C~~--~C~~~~g~~ 91 (461)
..|+ ..+|... ...|.+ .|.. ..|.|++||. |..|+ +.++|... ..|+. .|.. .
T Consensus 510 ~~Ce~~~~~C~~~~~~~C~~~~~G~C~~----g~C~C~~G~~----G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~----g 577 (687)
T 3k6s_B 510 QYCECDTINCERYNGQVCGGPGRGLCFC----GKCRCHPGFE----GSACQCERTTEGCLNPRRVECSGRGRCRC----N 577 (687)
T ss_dssp TTSCEESSCSCEETTEETSHHHHEEEET----TEEEECTTCC----STTSCSCCSSCTTBCTTCSBTSSSCCBCS----S
T ss_pred cccccccccccCCCCcCcCCCCCCeEEC----CEEEcCCCCc----CCCCccCCCCCCCCCCCCCCCCCCCcCCC----C
Confidence 4564 5566532 123543 3542 3899999995 66776 34667532 24643 5654 4
Q ss_pred cccCCCCeeeeCCCCcee
Q psy17325 92 ICSCNEGYVLEYDNHTCK 109 (461)
Q Consensus 92 ~C~C~~g~~l~~~~~~C~ 109 (461)
.|.|.+||. +..|.
T Consensus 578 ~C~C~~Gy~----G~~Ce 591 (687)
T 3k6s_B 578 VCECHSGYQ----LPLCQ 591 (687)
T ss_dssp CBCCSTTCC----TTTTC
T ss_pred EEECCCCCc----CCCCC
Confidence 799999994 55664
No 405
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=80.77 E-value=0.55 Score=32.40 Aligned_cols=27 Identities=22% Similarity=0.770 Sum_probs=19.8
Q ss_pred ceee-----ccCCccccCCCCeeeeCCCCcee-eccc
Q psy17325 83 MCTN-----TKGSYICSCNEGYVLEYDNHTCK-AINH 113 (461)
Q Consensus 83 ~C~~-----~~g~~~C~C~~g~~l~~~~~~C~-~~~~ 113 (461)
.|.+ ..++|.|.|++||. +..|. ++++
T Consensus 19 ~C~~~~~~~~~~~y~C~C~~Gf~----G~~Ce~~i~~ 51 (63)
T 1hae_A 19 ECFMVKDLSNPSRYLCKCQPGFT----GARCTENVPM 51 (63)
T ss_dssp EEEEEESSSSSCCEEEECCTTEE----STTSCEECCS
T ss_pred EEecCCccCCCCCEEEECCCCCc----CCccCcCcCc
Confidence 6775 56889999999995 66774 3443
No 406
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=80.65 E-value=66 Score=34.58 Aligned_cols=101 Identities=6% Similarity=0.036 Sum_probs=62.7
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCc
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~ 229 (461)
.+..+|+++.+..| .+-..++.|.+.+..+........ .-.....|++.| .. +|.-+. ....|...++.....
T Consensus 19 ~V~~lafspdg~~l-Asgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~--~L~S~s--~D~~v~lWd~~~~~~ 91 (902)
T 2oaj_A 19 KPIAAAFDFTQNLL-AIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GI--YLVVIN--AKDTVYVLSLYSQKV 91 (902)
T ss_dssp CEEEEEEETTTTEE-EEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TT--EEEEEE--TTCEEEEEETTTCSE
T ss_pred CcEEEEECCCCCEE-EEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcC-CC--EEEEEE--CcCeEEEEECCCCcE
Confidence 45678888755544 455557889999887655433332 223578899998 33 455544 346777777764332
Q ss_pred EEEEecccccceeEEeeccCCeeEEecCC
Q psy17325 230 STIISTKIYWPNGLTLDIATRRVYFADSK 258 (461)
Q Consensus 230 ~~i~~~~~~~P~glavD~~~~~ly~~d~~ 258 (461)
...+. .-.....+++++....|+.+...
T Consensus 92 ~~~~~-~~~~V~~v~~sp~g~~l~sgs~d 119 (902)
T 2oaj_A 92 LTTVF-VPGKITSIDTDASLDWMLIGLQN 119 (902)
T ss_dssp EEEEE-CSSCEEEEECCTTCSEEEEEETT
T ss_pred EEEEc-CCCCEEEEEECCCCCEEEEEcCC
Confidence 22222 22356788999888888776654
No 407
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=80.58 E-value=0.88 Score=28.88 Aligned_cols=23 Identities=30% Similarity=0.820 Sum_probs=18.0
Q ss_pred cee--eccCCccccCCCCeeeeCCCCcee
Q psy17325 83 MCT--NTKGSYICSCNEGYVLEYDNHTCK 109 (461)
Q Consensus 83 ~C~--~~~g~~~C~C~~g~~l~~~~~~C~ 109 (461)
.|. +..++|.|.|++||. +..|.
T Consensus 16 ~C~~~~~~~~~~C~C~~G~~----G~~Ce 40 (45)
T 1a3p_A 16 VXMHIESLDSYTCNCVIGYS----GDRCQ 40 (45)
T ss_dssp EEEECTTTSSEEEECCTTEE----TTTTC
T ss_pred EEEeecCCCCEEEEcCCCCc----CCcCC
Confidence 676 677899999999995 55663
No 408
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=80.35 E-value=0.63 Score=30.89 Aligned_cols=24 Identities=29% Similarity=0.559 Sum_probs=17.7
Q ss_pred CCce--eCCCCceEeCCCCCeecCCCCcee
Q psy17325 42 NTCH--PTPLGALCTCPPGEILSNDSVTCQ 69 (461)
Q Consensus 42 ~~C~--~~~~~~~C~C~~G~~l~~~~~~C~ 69 (461)
..|. ...++|.|.|++||. +..|+
T Consensus 18 G~C~~~~~~~~~~C~C~~Gyt----G~~Ce 43 (53)
T 1nql_B 18 GVCMYIEALDKYACNCVVGYI----GERCQ 43 (53)
T ss_dssp CEEEEETTTTEEEEEECTTEE----STTSC
T ss_pred eEEeeecCCCCEEEecCCCCc----CCCCC
Confidence 3576 456778999999995 56675
No 409
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=78.88 E-value=64 Score=33.34 Aligned_cols=15 Identities=20% Similarity=0.324 Sum_probs=12.5
Q ss_pred ceeEEEecCCCeEEE
Q psy17325 370 PNGLTLDIATRRVYF 384 (461)
Q Consensus 370 p~glaiD~~~~~ly~ 384 (461)
-.++++|+.++.+|+
T Consensus 383 w~~~a~dp~~g~~yv 397 (668)
T 1kv9_A 383 WHSMSFNPGTGLVYI 397 (668)
T ss_dssp SSCCEEETTTTEEEE
T ss_pred CCcceECCCCCEEEE
Confidence 345899999999997
No 410
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=78.47 E-value=37 Score=30.44 Aligned_cols=93 Identities=9% Similarity=-0.002 Sum_probs=49.9
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCC---cEEEEecCCCCCceeEEEcCC-CCceEEEEeecCCCCcEEEEecCC
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGT---NRIVLAKDNITQPRGMMLDPS-PGTRWLFWTDWGENPRIERIGMDG 226 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~---~~~~l~~~~~~~p~~ia~d~~-~g~~~ly~td~~~~~~I~~~~~dG 226 (461)
...+++++.+ +...+-..++.|.+.++++. ...++ .+.-.....+++.+. .+ .++.+- +....|..-++..
T Consensus 12 V~~~~~s~~g-~~las~s~D~~v~iw~~~~~~~~~~~~l-~gH~~~V~~v~~s~~~~g--~~l~s~-s~D~~v~iWd~~~ 86 (297)
T 2pm7_B 12 IHDAVMDYYG-KRMATCSSDKTIKIFEVEGETHKLIDTL-TGHEGPVWRVDWAHPKFG--TILASC-SYDGKVMIWKEEN 86 (297)
T ss_dssp EEEEEECTTS-SEEEEEETTSCEEEEEBCSSCBCCCEEE-CCCSSCEEEEEECCGGGC--SEEEEE-ETTTEEEEEEBSS
T ss_pred eEEEEECCCC-CEEEEEeCCCEEEEEecCCCCcEEEEEE-ccccCCeEEEEecCCCcC--CEEEEE-cCCCEEEEEEcCC
Confidence 4567777654 44555566788999887653 22233 222234667888543 24 444443 3345666666654
Q ss_pred CC--cEEEEecccccceeEEeecc
Q psy17325 227 SN--RSTIISTKIYWPNGLTLDIA 248 (461)
Q Consensus 227 ~~--~~~i~~~~~~~P~glavD~~ 248 (461)
.. ..............+++.+.
T Consensus 87 ~~~~~~~~~~~h~~~v~~v~~~p~ 110 (297)
T 2pm7_B 87 GRWSQIAVHAVHSASVNSVQWAPH 110 (297)
T ss_dssp SCBCCCEEECCCSSCEEEEEECCG
T ss_pred CceEEEEEeecCCCceeEEEeCcC
Confidence 32 11122222234567777765
No 411
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=78.17 E-value=44 Score=31.12 Aligned_cols=99 Identities=15% Similarity=0.151 Sum_probs=52.2
Q ss_pred eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeec-CCCeEEEee-CCCCCceeEEEecCCCeEEEEcCCCCeE
Q psy17325 315 YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD-GSNRSTIIS-TKIYWPNGLTLDIATRRVYFADSKLDFI 392 (461)
Q Consensus 315 p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~d-G~~~~~l~~-~~l~~p~glaiD~~~~~ly~~d~~~~~I 392 (461)
+.+++++ ++.||++... +.|...+.. |+. .--.. ..-......++ .+++||+.+. .+.|
T Consensus 270 ~~~~~~~--~~~l~~~~~~-------------g~l~~~d~~tG~~-~w~~~~~~~~~~~~~~~--~~~~l~v~~~-~g~l 330 (376)
T 3q7m_A 270 VNDFIVD--GNRIYLVDQN-------------DRVMALTIDGGVT-LWTQSDLLHRLLTSPVL--YNGNLVVGDS-EGYL 330 (376)
T ss_dssp EEEEEEE--TTEEEEEETT-------------CCEEEEETTTCCE-EEEECTTTTSCCCCCEE--ETTEEEEECT-TSEE
T ss_pred CCCceEE--CCEEEEEcCC-------------CeEEEEECCCCcE-EEeecccCCCcccCCEE--ECCEEEEEeC-CCeE
Confidence 4455555 7888887542 355555543 322 11111 11122334455 5789999865 5789
Q ss_pred EEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeCCCc
Q psy17325 393 DFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAE 444 (461)
Q Consensus 393 ~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~~~~ 444 (461)
..++.. +|...-.......... ....+.++.||+......
T Consensus 331 ~~~d~~-tG~~~~~~~~~~~~~~-----------~~~~~~~~~l~v~~~~G~ 370 (376)
T 3q7m_A 331 HWINVE-DGRFVAQQKVDSSGFQ-----------TEPVAADGKLLIQAKDGT 370 (376)
T ss_dssp EEEETT-TCCEEEEEECCTTCBC-----------SCCEEETTEEEEEBTTSC
T ss_pred EEEECC-CCcEEEEEecCCCcce-----------eCCEEECCEEEEEeCCCE
Confidence 999973 6665332221111111 122346899999876544
No 412
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=77.31 E-value=69 Score=32.89 Aligned_cols=95 Identities=12% Similarity=0.051 Sum_probs=56.6
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCc
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~ 229 (461)
.+..+++.+. +++..+-..++.|.+.++........+.........+++.|... .|.-+. ....|...++.+...
T Consensus 432 ~v~~v~~s~~-g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~--~l~s~s--~D~~i~iwd~~~~~~ 506 (694)
T 3dm0_A 432 FVEDVVLSSD-GQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNR--QIVSAS--RDRTIKLWNTLGECK 506 (694)
T ss_dssp CEEEEEECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSS--CEEEEE--TTSCEEEECTTSCEE
T ss_pred cEEEEEECCC-CCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCC--EEEEEe--CCCEEEEEECCCCcc
Confidence 4566777754 45555666689999999876554444444445678899998866 665544 345676666655433
Q ss_pred EEEEec---ccccceeEEeeccC
Q psy17325 230 STIIST---KIYWPNGLTLDIAT 249 (461)
Q Consensus 230 ~~i~~~---~~~~P~glavD~~~ 249 (461)
..+... .......+++.+..
T Consensus 507 ~~~~~~~~~h~~~v~~~~~~~~~ 529 (694)
T 3dm0_A 507 YTISEGGEGHRDWVSCVRFSPNT 529 (694)
T ss_dssp EEECSSTTSCSSCEEEEEECSCS
T ss_pred eeeccCCCCCCCcEEEEEEeCCC
Confidence 333221 11234567776544
No 413
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=77.26 E-value=71 Score=32.99 Aligned_cols=57 Identities=16% Similarity=0.139 Sum_probs=32.1
Q ss_pred eEEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEe
Q psy17325 372 GLTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYST 440 (461)
Q Consensus 372 glaiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd 440 (461)
+.++...++.||+. ...+.+..++.. +|...-.+... .+.. ..|... ..++++|++-
T Consensus 462 ~~~~~t~gg~vf~g-~~dg~l~a~d~~-tG~~l~~~~~~-~~~~--------~~p~~~-~~~G~~yva~ 518 (668)
T 1kv9_A 462 GGTLSTAGNLVFQG-TAAGQMHAYSAD-KGEALWQFEAQ-SGIV--------AAPMTF-ELAGRQYVAI 518 (668)
T ss_dssp CCEEEETTTEEEEE-CTTSEEEEEETT-TCCEEEEEECS-SCCC--------SCCEEE-EETTEEEEEE
T ss_pred CceeEeCCCEEEEE-CCcccchhhhhh-cChhheEecCC-CCcc--------cCceEE-EECCEEEEEE
Confidence 33333378888888 456788888883 56654333222 1111 124444 3567878764
No 414
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=77.17 E-value=68 Score=33.78 Aligned_cols=62 Identities=15% Similarity=0.199 Sum_probs=38.2
Q ss_pred CCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEec-----------ccccceeEEeecc-CCeeEEec
Q psy17325 192 TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST-----------KIYWPNGLTLDIA-TRRVYFAD 256 (461)
Q Consensus 192 ~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~-----------~~~~P~glavD~~-~~~ly~~d 256 (461)
.+..+|++||... +.+|+.- ....|+|..-.|...+.+... .......|++|+. .++||.+.
T Consensus 21 g~i~~i~~~p~~~-~~~y~~~--~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~ 94 (763)
T 3a0f_A 21 GFISGLVAHPTEK-DLIYART--DIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQ 94 (763)
T ss_dssp SCEEEEEECSSST-TCEEEEE--SSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEE
T ss_pred CceeEEEeCCCCC-CEEEEEe--ccCcEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEe
Confidence 3577899998763 1555543 345788777666655544331 1234678999985 46777654
No 415
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=76.87 E-value=80 Score=33.39 Aligned_cols=105 Identities=11% Similarity=0.148 Sum_probs=59.4
Q ss_pred ceeeeeeeec-CCeEEEEeCC-C----CeEEEEeCCCCcEEEEecC-CC-------CCceeEEEcCCCCceEEEEeecCC
Q psy17325 150 LVEGLAYDWI-GGHIYWLDSR-L----NRIEVCDENGTNRIVLAKD-NI-------TQPRGMMLDPSPGTRWLFWTDWGE 215 (461)
Q Consensus 150 ~p~~iavd~~-~~~ly~~d~~-~----~~I~~~~~~G~~~~~l~~~-~~-------~~p~~ia~d~~~g~~~ly~td~~~ 215 (461)
....|++|+. .+.+|++-.. . +.|.+..-.|..=+.+... .. .....|+++|... +.+|... .
T Consensus 65 ~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~-~~v~~g~--~ 141 (789)
T 1sqj_A 65 GTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNS-NEVWMGT--R 141 (789)
T ss_dssp SEEEEEEETTEEEEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEE-EEEEEEC--S
T ss_pred ceeEEEECCCCCCEEEEEeCccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCC-CEEEEEe--c
Confidence 4667888874 3567776432 2 6787776666654443221 10 0235799998743 2566533 3
Q ss_pred CCcEEEEecCCCCcEEEEecc-----cccceeEEeeccC-CeeEEecC
Q psy17325 216 NPRIERIGMDGSNRSTIISTK-----IYWPNGLTLDIAT-RRVYFADS 257 (461)
Q Consensus 216 ~~~I~~~~~dG~~~~~i~~~~-----~~~P~glavD~~~-~~ly~~d~ 257 (461)
...|++..=.|...+.+.... -.....|++|+.+ +.||++-.
T Consensus 142 ~~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~ 189 (789)
T 1sqj_A 142 TEGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASAT 189 (789)
T ss_dssp SSCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEES
T ss_pred cCCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEc
Confidence 467887666676666553210 0223467788754 46777654
No 416
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=76.55 E-value=41 Score=29.93 Aligned_cols=232 Identities=10% Similarity=0.013 Sum_probs=108.7
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcE
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS 230 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~ 230 (461)
...+++.+.+ +..++-..++.|.+.+.............-.....++.++ . .+.... ....+...........
T Consensus 70 V~~v~~~~~~-~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~--~--~l~s~~--~~~~~~~~~~~~~~~~ 142 (318)
T 4ggc_A 70 ISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNS--Y--ILSSGS--RSGHIHHHDVRVAEHH 142 (318)
T ss_dssp EEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEET--T--EEEEEE--TTSEEEEEETTSSSCE
T ss_pred EEEEEECCCC-CEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCC--C--EEEEEe--cCCceEeeecCCCcee
Confidence 4567777544 4555666678899998776554433333322333344432 3 444333 2233433333332222
Q ss_pred -EEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCC-Cc---
Q psy17325 231 -TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDG-SN--- 305 (461)
Q Consensus 231 -~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g-~~--- 305 (461)
............+++.+.+..|.-+.... .|...++.. ..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~-----------------------------------~i~iwd~~~~~~~~~ 187 (318)
T 4ggc_A 143 VATLSGHSQEVCGLRWAPDGRHLASGGNDN-----------------------------------LVNVWPSAPGEGGWV 187 (318)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTS-----------------------------------CEEEEESSCBTTBSC
T ss_pred EEEEcCccCceEEEEEcCCCCEEEEEecCc-----------------------------------ceeEEECCCCccccc
Confidence 22222334455666666555554433322 122222221 10
Q ss_pred -eEEEEeCC-eeeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeEE
Q psy17325 306 -ASILVSGQ-LYEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRVY 383 (461)
Q Consensus 306 -~~~l~~~~-~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~ly 383 (461)
........ ....++..+....+.+...+ .....|...+.......... ........+++.+..+.++
T Consensus 188 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----------~~~~~i~lwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~ 256 (318)
T 4ggc_A 188 PLQTFTQHQGAVKAVAWCPWQSNVLATGGG----------TSDRHIRIWNVCSGACLSAV-DAHSQVCSILWSPHYKELI 256 (318)
T ss_dssp CSEEECCCCSCEEEEEECTTSTTEEEEEEC----------TTTCEEEEEETTTCCEEEEE-ECSSCEEEEEEETTTTEEE
T ss_pred ceeeecccCCceEEEEecCCCCcEEEEEec----------CCCCEEEEEecccccccccc-cceeeeeeeeecccccceE
Confidence 01111101 14556666665554433221 11233433344333333332 3444566777877777777
Q ss_pred EEc-CCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeee-CCEEEEEeCCCceeec
Q psy17325 384 FAD-SKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLE-NGMLYYSTEGAEFLKT 448 (461)
Q Consensus 384 ~~d-~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~lYwtd~~~~~i~~ 448 (461)
.+- ...+.|...++. ++.....+..... +-.+|++. ++.+..|-...++||+
T Consensus 257 ~~sg~~d~~i~iwd~~-~~~~~~~l~gH~~------------~V~~l~~spdg~~l~S~s~D~~v~i 310 (318)
T 4ggc_A 257 SGHGFAQNQLVIWKYP-TMAKVAELKGHTS------------RVLSLTMSPDGATVASAAADETLRL 310 (318)
T ss_dssp EEECTTTCCEEEEETT-TCCEEEEECCCSS------------CEEEEEECTTSSCEEEEETTTEEEE
T ss_pred EEEEcCCCEEEEEECC-CCcEEEEEcCCCC------------CEEEEEEcCCCCEEEEEecCCeEEE
Confidence 654 345778888883 5555443321111 12455543 3445556666777764
No 417
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=76.24 E-value=47 Score=30.43 Aligned_cols=103 Identities=3% Similarity=-0.055 Sum_probs=63.9
Q ss_pred ceeeeeeee-cCCeEEEEeCCCCeEEEEeCCCCcEEEEec-CCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCC
Q psy17325 150 LVEGLAYDW-IGGHIYWLDSRLNRIEVCDENGTNRIVLAK-DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227 (461)
Q Consensus 150 ~p~~iavd~-~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~-~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~ 227 (461)
.+..+++.+ ..++++++-..++.|.+.++.......+.. ........+++.|... ++.+- +....|...++...
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~---~lasg-~~dg~i~iwd~~~~ 202 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSL---LLALY-SPDGILDVYNLSSP 202 (343)
T ss_dssp CEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSC---EEEEE-CTTSCEEEEESSCT
T ss_pred CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCC---EEEEE-cCCCEEEEEECCCC
Confidence 356677765 245566666678899999987665544332 2223477899999744 44443 34567888887654
Q ss_pred CcE-EEEec-ccccceeEEeeccCCeeEEec
Q psy17325 228 NRS-TIIST-KIYWPNGLTLDIATRRVYFAD 256 (461)
Q Consensus 228 ~~~-~i~~~-~~~~P~glavD~~~~~ly~~d 256 (461)
... ..+.. .......|++.+.+..|..+.
T Consensus 203 ~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~ 233 (343)
T 3lrv_A 203 DQASSRFPVDEEAKIKEVKFADNGYWMVVEC 233 (343)
T ss_dssp TSCCEECCCCTTSCEEEEEECTTSSEEEEEE
T ss_pred CCCccEEeccCCCCEEEEEEeCCCCEEEEEe
Confidence 432 22222 345678899988776666655
No 418
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=75.43 E-value=57 Score=30.96 Aligned_cols=233 Identities=10% Similarity=0.011 Sum_probs=115.4
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCc
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR 229 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~ 229 (461)
.+..|++.+.+ +...+-..++.|.+.++............-.....++.++ . .|.... ....+...+......
T Consensus 149 ~V~sv~fspdg-~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~--~--~l~sgs--~d~~i~~~d~~~~~~ 221 (420)
T 4gga_A 149 YISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNS--Y--ILSSGS--RSGHIHHHDVRVAEH 221 (420)
T ss_dssp CEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET--T--EEEEEE--TTSEEEEEETTSSSC
T ss_pred cEEEEEECCCC-CEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCC--C--EEEEEe--CCCceeEeeecccce
Confidence 35677777644 4455556678899999876554444443333455555553 2 444433 334555555543332
Q ss_pred E-EEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCc---
Q psy17325 230 S-TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSN--- 305 (461)
Q Consensus 230 ~-~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~--- 305 (461)
. ..+........++.+.+.+..|....... .|...+.....
T Consensus 222 ~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~-----------------------------------~v~i~~~~~~~~~~ 266 (420)
T 4gga_A 222 HVATLSGHSQEVCGLRWAPDGRHLASGGNDN-----------------------------------LVNVWPSAPGEGGW 266 (420)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTS-----------------------------------CEEEEESSCCSSCS
T ss_pred eeEEecccccceeeeeecCCCCeeeeeeccc-----------------------------------cceEEeeccccccc
Confidence 2 22223344556677776555554433322 12222221110
Q ss_pred --eEEEEeCCe-eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCCCceeEEEecCCCeE
Q psy17325 306 --ASILVSGQL-YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIYWPNGLTLDIATRRV 382 (461)
Q Consensus 306 --~~~l~~~~~-p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~~p~glaiD~~~~~l 382 (461)
......... ...++..|....++.+-.+ ...+.|...++........+ ..-..+..+.+.+..+.|
T Consensus 267 ~~~~~~~~~~~~V~~~~~~p~~~~~la~~~g----------s~D~~I~iwd~~t~~~~~~~-~~~~~v~~~~~~~~~~~l 335 (420)
T 4gga_A 267 VPLQTFTQHQGAVKAVAWCPWQSNVLATGGG----------TSDRHIRIWNVCSGACLSAV-DAHSQVCSILWSPHYKEL 335 (420)
T ss_dssp CCSEEECCCSSCEEEEEECTTCTTEEEEEEC----------TTTCEEEEEETTTTEEEEEE-ECSSCEEEEEEETTTTEE
T ss_pred eeeeeecccCCceeeeeeCCCcccEEEEEee----------cCCCEEEEEeCCccccceee-ccccceeeeeecCCCCeE
Confidence 111111111 5677777777766654322 11233444443322222222 233456777888777888
Q ss_pred EEEcC-CCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeee-CCEEEEEeCCCceeec
Q psy17325 383 YFADS-KLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLE-NGMLYYSTEGAEFLKT 448 (461)
Q Consensus 383 y~~d~-~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~lYwtd~~~~~i~~ 448 (461)
+.+-. ..+.|...++. ++.....+. +... ...+|++. ++.+.+|-...++||+
T Consensus 336 v~~sg~~d~~I~iwd~~-~~~~v~~l~-gH~~-----------~V~~l~~spdg~~l~S~s~D~tvri 390 (420)
T 4gga_A 336 ISGHGFAQNQLVIWKYP-TMAKVAELK-GHTS-----------RVLSLTMSPDGATVASAAADETLRL 390 (420)
T ss_dssp EEEECTTTCCEEEEETT-TCCEEEEEC-CCSS-----------CEEEEEECTTSSCEEEEETTTEEEE
T ss_pred EEEEecCCCEEEEEECC-CCcEEEEEc-CCCC-----------CEEEEEEcCCCCEEEEEecCCeEEE
Confidence 77643 45778888883 555443332 2111 12345443 3445556566777764
No 419
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=75.33 E-value=53 Score=30.56 Aligned_cols=61 Identities=11% Similarity=0.258 Sum_probs=32.7
Q ss_pred CCeEEEEeCCCCeEEEEeC-CCCcEEEEecC---------CCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecC-CC
Q psy17325 160 GGHIYWLDSRLNRIEVCDE-NGTNRIVLAKD---------NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMD-GS 227 (461)
Q Consensus 160 ~~~ly~~d~~~~~I~~~~~-~G~~~~~l~~~---------~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~d-G~ 227 (461)
.+.||+... .+.|...+. +|+..-..-.. .......++++ .+ .||+.. ....|...+.. |+
T Consensus 53 ~~~v~~~~~-~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~v~v~~--~~g~l~a~d~~tG~ 124 (376)
T 3q7m_A 53 DNVVYAADR-AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVS--GG--HVYIGS--EKAQVYALNTSDGT 124 (376)
T ss_dssp TTEEEEECT-TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEE--TT--EEEEEE--TTSEEEEEETTTCC
T ss_pred CCEEEEEcC-CCeEEEEEccCCceeeeecCccccccccccCcccccCceEe--CC--EEEEEc--CCCEEEEEECCCCC
Confidence 667777654 457777776 45543222111 00011334454 35 788876 23578877765 54
No 420
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=74.95 E-value=1.1 Score=45.93 Aligned_cols=27 Identities=37% Similarity=0.909 Sum_probs=23.4
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCCCCCC
Q psy17325 2 ADRCVNLTKVCDGKTDCPNGADEGPGCD 29 (461)
Q Consensus 2 ~~~Ci~~~~~Cd~~~dC~dg~de~~~C~ 29 (461)
++.|++..++|||..||.||+|| ..|.
T Consensus 250 ~~~C~~~~~~cdG~~dC~~gsDE-~~C~ 276 (565)
T 2xrc_A 250 SGVCIPSQYQCNGEVDCITGEDE-VGCA 276 (565)
T ss_dssp TTEEECGGGTTSSSCCSSSCTTS-SSCC
T ss_pred CCcccCccccCCCcccCCCCccc-cCcC
Confidence 35799999999999999999999 5563
No 421
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=74.44 E-value=85 Score=32.53 Aligned_cols=56 Identities=18% Similarity=0.038 Sum_probs=32.0
Q ss_pred EEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeC
Q psy17325 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTE 441 (461)
Q Consensus 374 aiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~ 441 (461)
++...++.||.. ...+.++.+|.. +|...-.+....... ..|+.. ..+|+.|++-.
T Consensus 481 ~~~tagglvf~g-t~dg~l~a~D~~-tG~~lw~~~~~~~~~---------~~p~ty-~~~G~qyv~~~ 536 (689)
T 1yiq_A 481 TLSTAGNLVFEG-SADGRVIAYAAD-TGEKLWEQPAASGVM---------AAPVTY-SVDGEQYVTFM 536 (689)
T ss_dssp EEEETTTEEEEE-CTTSEEEEEETT-TCCEEEEEECSSCCC---------SCCEEE-EETTEEEEEEE
T ss_pred cceECCCEEEEE-CCCCcEEEEECC-CCccceeeeCCCCcc---------cCceEE-EECCEEEEEEE
Confidence 444467788887 456788888883 677643333221111 124444 35678888744
No 422
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=72.35 E-value=86 Score=31.64 Aligned_cols=15 Identities=20% Similarity=0.235 Sum_probs=12.9
Q ss_pred eeEEEecCCCeEEEE
Q psy17325 371 NGLTLDIATRRVYFA 385 (461)
Q Consensus 371 ~glaiD~~~~~ly~~ 385 (461)
.++++|+.++.||+.
T Consensus 389 ~~~a~dp~~g~~yv~ 403 (571)
T 2ad6_A 389 GVDSYDPESRTLYAG 403 (571)
T ss_dssp CBCEEETTTTEEEEE
T ss_pred CCceECCCCCEEEEE
Confidence 468999999999986
No 423
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=71.26 E-value=63 Score=29.66 Aligned_cols=152 Identities=9% Similarity=0.037 Sum_probs=77.1
Q ss_pred CceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCc--EEEE-ecccccceeEEeeccCCeeEEecCCCceeeecccce
Q psy17325 193 QPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNR--STII-STKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEI 269 (461)
Q Consensus 193 ~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~--~~i~-~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~ 269 (461)
....|++.|... +|..+. ....|..-++.+... .... .........|++.+.++.|..+....
T Consensus 18 ~v~~l~~sp~g~--~las~~--~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~---------- 83 (345)
T 3fm0_A 18 RCWFLAWNPAGT--LLASCG--GDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA---------- 83 (345)
T ss_dssp CEEEEEECTTSS--CEEEEE--TTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS----------
T ss_pred cEEEEEECCCCC--EEEEEc--CCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC----------
Confidence 456889998755 555443 345666666655432 1122 22233567888988766666554332
Q ss_pred eeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEE--EEeCCe--eeeEEEeccCCeEEEeecCceeeEEEeecCC
Q psy17325 270 KTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASI--LVSGQL--YEALALDLENGMLYYSTLKCTRWLFWTDWGE 345 (461)
Q Consensus 270 ~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~--l~~~~~--p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~ 345 (461)
.|..-+++....+. .+.... ...+++.|.+..|.-+ ..
T Consensus 84 -------------------------~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~-s~------------ 125 (345)
T 3fm0_A 84 -------------------------TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATC-SR------------ 125 (345)
T ss_dssp -------------------------CEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEE-ET------------
T ss_pred -------------------------cEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEE-EC------------
Confidence 23333333222111 122111 7888999866554433 22
Q ss_pred CCceEEEeecCCCe-EE--EeeCCCCCceeEEEecCCCeEEEEcCCCCeEEEEEe
Q psy17325 346 NPRIERIGMDGSNR-ST--IISTKIYWPNGLTLDIATRRVYFADSKLDFIDFCNY 397 (461)
Q Consensus 346 ~~~I~~~~~dG~~~-~~--l~~~~l~~p~glaiD~~~~~ly~~d~~~~~I~~~~~ 397 (461)
.+.|...+++.... .. .+.........+++.+.+..|..+ ...+.|...+.
T Consensus 126 D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~-s~d~~i~~w~~ 179 (345)
T 3fm0_A 126 DKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASA-SYDDTVKLYRE 179 (345)
T ss_dssp TSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEE-ETTSCEEEEEE
T ss_pred CCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEE-eCCCcEEEEEe
Confidence 33444444443222 11 122334456778887665555544 34456776666
No 424
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=70.87 E-value=1.1e+02 Score=32.08 Aligned_cols=60 Identities=12% Similarity=0.182 Sum_probs=39.6
Q ss_pred CceeEEEcCCC-CceEEEEeecCCCCcEEEEecCCCCcEEEEec-c-----cccceeEEeecc-CCeeEEec
Q psy17325 193 QPRGMMLDPSP-GTRWLFWTDWGENPRIERIGMDGSNRSTIIST-K-----IYWPNGLTLDIA-TRRVYFAD 256 (461)
Q Consensus 193 ~p~~ia~d~~~-g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~-~-----~~~P~glavD~~-~~~ly~~d 256 (461)
+..+|+++|.+ + .||..- ....|+|..-.|...+.+... . ......|++|+. .++||++-
T Consensus 24 ~i~~i~~~p~~~~--~~~~~~--~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~ 91 (737)
T 2cn3_A 24 FMPGIVFNETEKD--LIYARA--AIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVA 91 (737)
T ss_dssp CCCEEEECSSSTT--CEEEEC--SSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEE
T ss_pred eeeEEEECCCCCC--EEEEEe--cCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEe
Confidence 67899999875 4 566533 346799887777666654321 1 223568999984 46788764
No 425
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=70.81 E-value=1.3 Score=29.15 Aligned_cols=24 Identities=21% Similarity=0.509 Sum_probs=17.9
Q ss_pred CCcee----CCCCceEeCCCCCeecCCCCcee
Q psy17325 42 NTCHP----TPLGALCTCPPGEILSNDSVTCQ 69 (461)
Q Consensus 42 ~~C~~----~~~~~~C~C~~G~~l~~~~~~C~ 69 (461)
..|.. ..++|.|.|++||. +..|+
T Consensus 20 GtC~~~~~~~~~~y~C~C~~Gf~----G~~Ce 47 (52)
T 3ca7_A 20 AHCFAVKIADLPVYSCECAIGFM----GQRCE 47 (52)
T ss_dssp CEEEEEEETTEEEEEEECCTTEE----STTSC
T ss_pred CEEecCccCCCCCEEEECCCCCc----CCCCc
Confidence 35875 34578999999996 56675
No 426
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=67.61 E-value=1.1 Score=37.14 Aligned_cols=18 Identities=33% Similarity=1.014 Sum_probs=13.0
Q ss_pred ceeeccCCccccCCCCee
Q psy17325 83 MCTNTKGSYICSCNEGYV 100 (461)
Q Consensus 83 ~C~~~~g~~~C~C~~g~~ 100 (461)
.|.+...+|.|.|.+||.
T Consensus 132 ~C~~~~~~~~c~C~~g~~ 149 (157)
T 1g1t_A 132 ECVETINNYTCKCDPGFS 149 (157)
T ss_dssp EEEEETTEEEEEECTTEE
T ss_pred EeecCCCCeeEECCCCcc
Confidence 455667777888888877
No 427
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=67.36 E-value=2.3 Score=43.07 Aligned_cols=50 Identities=24% Similarity=0.590 Sum_probs=11.5
Q ss_pred CCceEeCCCCCeecCCCCcee-----------cCcceec-----CCcccCceeeccCCccccCCCCeeeeCCCCce
Q psy17325 49 LGALCTCPPGEILSNDSVTCQ-----------DMNECEQ-----PGYCSQMCTNTKGSYICSCNEGYVLEYDNHTC 108 (461)
Q Consensus 49 ~~~~C~C~~G~~l~~~~~~C~-----------d~~eC~~-----~~~C~~~C~~~~g~~~C~C~~g~~l~~~~~~C 108 (461)
..+.|.|++||. +..|+ ++++|.. .+.|...|... .++|.|++||. +..|
T Consensus 458 ~tg~C~C~~g~~----G~~Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~~~~C~~~--tG~C~C~~G~~----G~~C 523 (525)
T 4aqs_A 458 ETGYCYCKRLVT----GQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSED--SGQCSCLPHMI----GRQC 523 (525)
T ss_dssp TTCCBCBCTTCC----STTTCC------------------------------------------------------
T ss_pred CCCEEECCCCCc----CCCcccCCCCccCCCCCCCCCcCCCCCCCCccCCccCCC--CCeeECCCCCc----CCCC
Confidence 345799999984 45553 2344431 11233344332 34799999994 5555
No 428
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=66.21 E-value=73 Score=28.42 Aligned_cols=95 Identities=14% Similarity=0.131 Sum_probs=49.6
Q ss_pred eeeeeeeec-CCeEEEEeCCCCeEEEEeCCCCc--EEEEecCCCCCceeEEEcCCC-CceEEEEeecCCCCcEEEEecCC
Q psy17325 151 VEGLAYDWI-GGHIYWLDSRLNRIEVCDENGTN--RIVLAKDNITQPRGMMLDPSP-GTRWLFWTDWGENPRIERIGMDG 226 (461)
Q Consensus 151 p~~iavd~~-~~~ly~~d~~~~~I~~~~~~G~~--~~~l~~~~~~~p~~ia~d~~~-g~~~ly~td~~~~~~I~~~~~dG 226 (461)
+..+++.+. .+++..+-+.++.|.+.++.... ........-.....+++.|.. | ..|..+. ....|...++..
T Consensus 56 V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g-~~l~s~s--~d~~v~~wd~~~ 132 (297)
T 2pm7_B 56 VWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG-PMLLVAS--SDGKVSVVEFKE 132 (297)
T ss_dssp EEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGC-SEEEEEE--TTSEEEEEEBCS
T ss_pred eEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCC-cEEEEEE--CCCcEEEEEecC
Confidence 344555432 36677777778999999976532 112222222457788998862 3 1444333 345666666653
Q ss_pred CC--cEEEEecccccceeEEeecc
Q psy17325 227 SN--RSTIISTKIYWPNGLTLDIA 248 (461)
Q Consensus 227 ~~--~~~i~~~~~~~P~glavD~~ 248 (461)
.. ....+.........+++.+.
T Consensus 133 ~~~~~~~~~~~h~~~v~~~~~~p~ 156 (297)
T 2pm7_B 133 NGTTSPIIIDAHAIGVNSASWAPA 156 (297)
T ss_dssp SSCBCCEEEECCSSCEEEEEECCC
T ss_pred CCceeeeeeecccCccceEeecCC
Confidence 32 12222222233455666553
No 429
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=66.07 E-value=1.3 Score=29.99 Aligned_cols=24 Identities=21% Similarity=0.509 Sum_probs=16.0
Q ss_pred CCcee----CCCCceEeCCCCCeecCCCCcee
Q psy17325 42 NTCHP----TPLGALCTCPPGEILSNDSVTCQ 69 (461)
Q Consensus 42 ~~C~~----~~~~~~C~C~~G~~l~~~~~~C~ 69 (461)
..|.. ...++.|.|++||. |..|+
T Consensus 20 GtC~~~~~~~~~~~~C~C~~Gf~----G~~Ce 47 (58)
T 3ltf_D 20 AHCFAVKIADLPVYSCECAIGFM----GQRCE 47 (58)
T ss_dssp CEEEEEEETTEEEEEEEECTTEE----SSSSC
T ss_pred CEEeCCccCCCCCEEeECCCCCc----cCCCc
Confidence 35762 33467899999985 56665
No 430
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=65.10 E-value=1.2e+02 Score=30.61 Aligned_cols=111 Identities=13% Similarity=0.225 Sum_probs=56.4
Q ss_pred eeEEEeccCCeEEEeecCceeeEEEee----------c-----------CCCCceEEEeec-CCCeEEEeeCCCCCceeE
Q psy17325 316 EALALDLENGMLYYSTLKCTRWLFWTD----------W-----------GENPRIERIGMD-GSNRSTIISTKIYWPNGL 373 (461)
Q Consensus 316 ~~iavd~~~~~lY~t~~~~~~~l~~~d----------~-----------~~~~~I~~~~~d-G~~~~~l~~~~l~~p~gl 373 (461)
.++++||..+.+|+.... ..+.|+.. + ...+.|...++. |+.+=..-...-.+-..+
T Consensus 415 ~~~a~dp~~g~~yv~~~~-~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~ 493 (582)
T 1flg_A 415 NPMAYSQDTGLFYVPANH-WKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVL 493 (582)
T ss_dssp SCCEECTTTCCEEEEEEC-EEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCE
T ss_pred CCceECCCCCEEEEechh-cceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccce
Confidence 368999999999986532 11112210 0 012455555543 432212211111111123
Q ss_pred EEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeC
Q psy17325 374 TLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTE 441 (461)
Q Consensus 374 aiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~ 441 (461)
+. .++.||+.+ ..+.++.+|.. +|...-.+.... +.. ..|+... .+|++|++-.
T Consensus 494 ~t--agglvf~g~-~dg~l~A~D~~-tG~~lW~~~~~~-g~~--------a~P~~y~-~~G~qYv~~~ 547 (582)
T 1flg_A 494 AT--AGNLVFTGT-GDGYFKAFDAK-SGKELWKFQTGS-GIV--------SPPITWE-QDGEQYLGVT 547 (582)
T ss_dssp EE--TTTEEEEEC-TTSEEEEEETT-TCCEEEEEECSS-CCC--------SCCEEEE-ETTEEEEEEE
T ss_pred Ee--CCCEEEEEC-CCCcEEEEECC-CCCEEEEecCCC-Ccc--------cCceEEE-ECCEEEEEEE
Confidence 44 678888875 45788999883 677643332221 111 1244443 5788888754
No 431
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=62.80 E-value=91 Score=28.38 Aligned_cols=154 Identities=7% Similarity=0.017 Sum_probs=77.8
Q ss_pred CCceeEEEcC--CCCceEEEEeecCCCCcEEEEecCCCCcEEEEecc-cccceeEEeeccCCeeEEecCCCceeeecccc
Q psy17325 192 TQPRGMMLDP--SPGTRWLFWTDWGENPRIERIGMDGSNRSTIISTK-IYWPNGLTLDIATRRVYFADSKLDFIDCKSLE 268 (461)
Q Consensus 192 ~~p~~ia~d~--~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~~-~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~ 268 (461)
.....++++| ... ++..+. ....|...++.......+.... -.....+++.+.+..|..... .+
T Consensus 126 ~~v~~~~~~~~~~~~--~l~s~s--~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~-dg-------- 192 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTE--YFIWAD--NRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSP-DG-------- 192 (343)
T ss_dssp SCEEEEECCC---CC--EEEEEE--TTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECT-TS--------
T ss_pred CCEEEEEcCCCCCCC--EEEEEe--CCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcC-CC--------
Confidence 3477889988 644 444343 4467877787754443333222 224678899875544443332 22
Q ss_pred eeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceE-EEEeC---CeeeeEEEeccCCeEEEeecCceeeEEEeecC
Q psy17325 269 IKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNAS-ILVSG---QLYEALALDLENGMLYYSTLKCTRWLFWTDWG 344 (461)
Q Consensus 269 ~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~-~l~~~---~~p~~iavd~~~~~lY~t~~~~~~~l~~~d~~ 344 (461)
.|...++...... ..+.. .....|++.|.+..|..+..+
T Consensus 193 --------------------------~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~----------- 235 (343)
T 3lrv_A 193 --------------------------ILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQ----------- 235 (343)
T ss_dssp --------------------------CEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESS-----------
T ss_pred --------------------------EEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCC-----------
Confidence 3444444433322 22222 127888999876666554422
Q ss_pred CCCceEEEeecCCCe-EEEee-CCCCCc---eeEEEecCCCeEEEEcCCCCeEEEEEec
Q psy17325 345 ENPRIERIGMDGSNR-STIIS-TKIYWP---NGLTLDIATRRVYFADSKLDFIDFCNYD 398 (461)
Q Consensus 345 ~~~~I~~~~~dG~~~-~~l~~-~~l~~p---~glaiD~~~~~ly~~d~~~~~I~~~~~~ 398 (461)
.|...++..... ..+.. ..-..+ ..+++++.+..|..+....+.|...+++
T Consensus 236 ---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~ 291 (343)
T 3lrv_A 236 ---TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFD 291 (343)
T ss_dssp ---BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred ---eEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEc
Confidence 333333322211 11100 000011 3599997777777654445677777774
No 432
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=62.77 E-value=2.3 Score=44.31 Aligned_cols=41 Identities=27% Similarity=0.685 Sum_probs=28.1
Q ss_pred eEeCC------CCCeecCCCCcee-cCcceec--CCcccC----ceeeccCCccccCCCCee
Q psy17325 52 LCTCP------PGEILSNDSVTCQ-DMNECEQ--PGYCSQ----MCTNTKGSYICSCNEGYV 100 (461)
Q Consensus 52 ~C~C~------~G~~l~~~~~~C~-d~~eC~~--~~~C~~----~C~~~~g~~~C~C~~g~~ 100 (461)
.|.|+ +||. |..|+ +..+|.. ...|+. .|.. .+|.|++||.
T Consensus 494 ~C~C~~~~~~~~G~~----G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~----g~C~C~~G~~ 547 (687)
T 3k6s_B 494 QCLCHTSDVPGKLIY----GQYCECDTINCERYNGQVCGGPGRGLCFC----GKCRCHPGFE 547 (687)
T ss_dssp EEEECCCCSTTCCEE----STTSCEESSCSCEETTEETSHHHHEEEET----TEEEECTTCC
T ss_pred EEEcCCCCCCCCCcc----ccccccccccccCCCCcCcCCCCCCeEEC----CEEEcCCCCc
Confidence 89999 9996 67786 5667752 124642 5653 2799999984
No 433
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=61.43 E-value=96 Score=28.16 Aligned_cols=90 Identities=12% Similarity=0.037 Sum_probs=46.5
Q ss_pred EEEEeCCCCeEEEEeCCCCc--EEEEe-cC-CCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCC-----cE--E
Q psy17325 163 IYWLDSRLNRIEVCDENGTN--RIVLA-KD-NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN-----RS--T 231 (461)
Q Consensus 163 ly~~d~~~~~I~~~~~~G~~--~~~l~-~~-~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~-----~~--~ 231 (461)
+..+-..++.|.+.++.... ....+ .. .-.....+++.|... +|.... ....|...++.... .. .
T Consensus 26 ~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~--~las~s--~D~~v~iw~~~~~~~~~~~~~~~~ 101 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTS--LLAAGS--FDSTVSIWAKEESADRTFEMDLLA 101 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSS--EEEEEE--TTSCEEEEEC-------CCCEEEE
T ss_pred EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCC--EEEEEe--CCCcEEEEEcccCcCccccceeEE
Confidence 55566667888888876532 12222 22 234577899999755 555544 33455555553211 11 1
Q ss_pred EEecccccceeEEeeccCCeeEEec
Q psy17325 232 IISTKIYWPNGLTLDIATRRVYFAD 256 (461)
Q Consensus 232 i~~~~~~~P~glavD~~~~~ly~~d 256 (461)
.+.........+++.+.+..|.-+.
T Consensus 102 ~~~~h~~~V~~v~~sp~g~~las~s 126 (330)
T 2hes_X 102 IIEGHENEVKGVAWSNDGYYLATCS 126 (330)
T ss_dssp EEC----CEEEEEECTTSCEEEEEE
T ss_pred EEcCCCCcEEEEEECCCCCEEEEEe
Confidence 1222233567888887666555443
No 434
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=59.47 E-value=1.7e+02 Score=30.38 Aligned_cols=67 Identities=15% Similarity=0.066 Sum_probs=37.0
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEec-CC-----CCCceeEEEcCCCCceEEEEeecCCCCcEEEEec
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK-DN-----ITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGM 224 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~-~~-----~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~ 224 (461)
+..+..|. .++|++.- .+.|.+.++.....+.... .. ......|..|.. | .|++.-. ...+.+.+.
T Consensus 375 v~~i~~d~-~g~lWigt--~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~-g--~lWigT~--~~Gl~~~~~ 446 (758)
T 3ott_A 375 IRHIYEDK-EQQLWIAT--DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTA-G--QLWISTC--LGGIFVVDK 446 (758)
T ss_dssp EEEEEECT-TSCEEEEE--TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTT-S--EEEEEES--SSCEEEEEH
T ss_pred eEEEEECC-CCCEEEEe--CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCC-C--CEEEEEC--CCceEEEcc
Confidence 34555563 56677654 2578888876544333221 11 123456777764 5 6777552 236777665
Q ss_pred C
Q psy17325 225 D 225 (461)
Q Consensus 225 d 225 (461)
.
T Consensus 447 ~ 447 (758)
T 3ott_A 447 H 447 (758)
T ss_dssp H
T ss_pred c
Confidence 4
No 435
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=58.76 E-value=1e+02 Score=27.71 Aligned_cols=64 Identities=6% Similarity=-0.027 Sum_probs=38.6
Q ss_pred CCCceeEEEcCCC--CceEEEEeecCCCCcEEEEecCC--CCcEEEEecccccceeEEeeccCCeeEEecC
Q psy17325 191 ITQPRGMMLDPSP--GTRWLFWTDWGENPRIERIGMDG--SNRSTIISTKIYWPNGLTLDIATRRVYFADS 257 (461)
Q Consensus 191 ~~~p~~ia~d~~~--g~~~ly~td~~~~~~I~~~~~dG--~~~~~i~~~~~~~P~glavD~~~~~ly~~d~ 257 (461)
-.....|++.|.. | .++++- +....|...+++. ......+.........+++.+.++.|+.+..
T Consensus 39 ~~~v~~~~~~~~~~~g--~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 106 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPG--NFLIAG-SWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASC 106 (368)
T ss_dssp SSCEEEEEECCTTSSS--EEEEEE-ETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEET
T ss_pred CCceEEEEEcCCCCCc--eEEEEE-CCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcC
Confidence 3557889999885 4 444443 2345677777764 3222333334456778999886666665543
No 436
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=56.63 E-value=6.5 Score=38.14 Aligned_cols=28 Identities=18% Similarity=0.309 Sum_probs=12.7
Q ss_pred cccCCCCCCCCCceeCCCCceEeCCC-CC
Q psy17325 32 ECKHKFGLCSNTCHPTPLGALCTCPP-GE 59 (461)
Q Consensus 32 ~C~~~~~~C~~~C~~~~~~~~C~C~~-G~ 59 (461)
+|..+++.....|.....+|.|.|+. ||
T Consensus 187 ~C~~~pC~n~g~C~~~~~~~~C~C~~~~~ 215 (410)
T 3asi_A 187 TCQEDSCSNQGVCLQQWDGFSCDCSMTSF 215 (410)
T ss_dssp CCCTTSSSTTCEEEECSSSEEEECTTTSE
T ss_pred CcccccCCCCCEecCCCCCceEeccCCcc
Confidence 34433322233455555555555553 44
No 437
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=55.11 E-value=4 Score=41.46 Aligned_cols=34 Identities=29% Similarity=0.801 Sum_probs=25.6
Q ss_pred CcceecCCcccC--ceee-ccCCccccCC-CCeeeeCCCCcee
Q psy17325 71 MNECEQPGYCSQ--MCTN-TKGSYICSCN-EGYVLEYDNHTCK 109 (461)
Q Consensus 71 ~~eC~~~~~C~~--~C~~-~~g~~~C~C~-~g~~l~~~~~~C~ 109 (461)
+++|. ...|.+ .|.+ ..++|.|.|+ +||. +..|.
T Consensus 2 ~d~C~-~~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce 39 (553)
T 1q4g_A 2 VNPCC-YYPCQHQGICVRFGLDRYQCDCTRTGYS----GPNCT 39 (553)
T ss_dssp CCGGG-GCCCCTTCEEEEETTTEEEEECTTSSEE----TTTTC
T ss_pred CCcCC-CCCCCCCCCcCCCCCCceEeeCCCCCcC----CCCCC
Confidence 46674 345753 7988 8899999999 9995 66774
No 438
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=54.96 E-value=1.8e+02 Score=29.44 Aligned_cols=55 Identities=13% Similarity=0.093 Sum_probs=31.0
Q ss_pred EEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeC
Q psy17325 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTE 441 (461)
Q Consensus 373 laiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~ 441 (461)
|+. .++.||+.. ..+.+..+|.. +|...-......... ..|+.. ..+|++|++-.
T Consensus 480 ~~t--agg~vf~gt-~dg~l~A~D~~-tG~~lW~~~l~~g~~---------~~P~~y-~~~G~qyv~~~ 534 (599)
T 1w6s_A 480 MAT--AGDLVFYGT-LDGYLKARDSD-TGDLLWKFKIPSGAI---------GYPMTY-THKGTQYVAIY 534 (599)
T ss_dssp EEE--TTTEEEEEC-TTSEEEEEETT-TCCEEEEEECSSCCC---------SCCEEE-EETTEEEEEEE
T ss_pred eEe--cCCEEEEEC-CCCeEEEEECC-CCCEEEEeeCCCCcE---------eccEEE-EeCCEEEEEEE
Confidence 555 678888864 45788888883 676543332211111 124444 35678887643
No 439
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=53.45 E-value=9.5 Score=24.78 Aligned_cols=19 Identities=21% Similarity=0.641 Sum_probs=14.0
Q ss_pred CCceEeCCCCCeecCCCCceecC
Q psy17325 49 LGALCTCPPGEILSNDSVTCQDM 71 (461)
Q Consensus 49 ~~~~C~C~~G~~l~~~~~~C~d~ 71 (461)
+.+.|.|++||. |..|+..
T Consensus 28 ~~~~C~C~~gy~----G~RCe~~ 46 (50)
T 3e50_C 28 DKPACVCHSGYV----GARCEHA 46 (50)
T ss_pred CCeEEECCCCCc----ccCCCce
Confidence 567999999995 5667543
No 440
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=50.10 E-value=1.6e+02 Score=27.40 Aligned_cols=98 Identities=4% Similarity=-0.098 Sum_probs=50.9
Q ss_pred eEEEEeCCCCeEEEEeCCCCcEEE--Ee---cCCCCCceeEEEcCC-------CCceEEEEeecCCCCcEEEEecCCCCc
Q psy17325 162 HIYWLDSRLNRIEVCDENGTNRIV--LA---KDNITQPRGMMLDPS-------PGTRWLFWTDWGENPRIERIGMDGSNR 229 (461)
Q Consensus 162 ~ly~~d~~~~~I~~~~~~G~~~~~--l~---~~~~~~p~~ia~d~~-------~g~~~ly~td~~~~~~I~~~~~dG~~~ 229 (461)
++..+-..++.|...+.+...... ++ .+.-.....|++.|. .+ .+..+- +....|..-++.....
T Consensus 102 ~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~--~~las~-s~D~tv~~Wd~~~~~~ 178 (393)
T 4gq1_A 102 LFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAE--QVIASV-GDDCTLIIWRLTDEGP 178 (393)
T ss_dssp EEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEE--EEEEEE-ETTSEEEEEEEETTEE
T ss_pred CEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCC--CEEEEE-ECCCeEEEEECCCCce
Confidence 344445556777777766543321 21 122344678888652 24 566554 4445666666643322
Q ss_pred EEEEecccccceeEEeeccCCeeEEecCCCcee
Q psy17325 230 STIISTKIYWPNGLTLDIATRRVYFADSKLDFI 262 (461)
Q Consensus 230 ~~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i 262 (461)
.......-.....+++.+.+.++..+-...+.|
T Consensus 179 ~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v 211 (393)
T 4gq1_A 179 ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNI 211 (393)
T ss_dssp EEEEEECSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred eeeecCCCCCcEEEEECCCCCceEEecCCCCEE
Confidence 222222234566788887666555554444443
No 441
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=48.36 E-value=1.6e+02 Score=26.83 Aligned_cols=96 Identities=11% Similarity=0.066 Sum_probs=50.6
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecC-CC-CCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCC
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKD-NI-TQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSN 228 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~-~~-~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~ 228 (461)
..+|+++. +++|.+- ..+.|.+..-.|..=+.+... .+ ..+.+|+..+. + .+|.+. ....|++..=.|..
T Consensus 82 ~~~i~~~~--~~~~~~g-~~g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~-~--~~~~~~--~~g~v~~S~DgG~t 153 (327)
T 2xbg_A 82 FNSVSFQG--NEGWIVG-EPPIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGN-G--SAEMIT--NVGAIYRTKDSGKN 153 (327)
T ss_dssp EEEEEEET--TEEEEEE-ETTEEEEESSTTSSCEECCCCTTCSSCEEEEEEEET-T--EEEEEE--TTCCEEEESSTTSS
T ss_pred EEEEEecC--CeEEEEE-CCCeEEEECCCCCCceECccccCCCCCeEEEEEECC-C--CEEEEe--CCccEEEEcCCCCC
Confidence 35567763 6777653 345677754445543333221 11 24567776543 4 566654 34567776555666
Q ss_pred cEEEEecccccceeEEeeccCCeeEEe
Q psy17325 229 RSTIISTKIYWPNGLTLDIATRRVYFA 255 (461)
Q Consensus 229 ~~~i~~~~~~~P~glavD~~~~~ly~~ 255 (461)
.+.+.........++++++. +++|.+
T Consensus 154 W~~~~~~~~~~~~~~~~~~~-~~~~~~ 179 (327)
T 2xbg_A 154 WQALVQEAIGVMRNLNRSPS-GEYVAV 179 (327)
T ss_dssp EEEEECSCCCCEEEEEECTT-SCEEEE
T ss_pred CEEeecCCCcceEEEEEcCC-CcEEEE
Confidence 65554332234556777753 444443
No 442
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=48.00 E-value=9.1 Score=32.56 Aligned_cols=15 Identities=33% Similarity=0.977 Sum_probs=10.8
Q ss_pred ceEeCCCCCeecCCCCcee
Q psy17325 51 ALCTCPPGEILSNDSVTCQ 69 (461)
Q Consensus 51 ~~C~C~~G~~l~~~~~~C~ 69 (461)
..|.|++||. |..|+
T Consensus 165 ~~C~C~~Gw~----G~~C~ 179 (188)
T 2ygo_A 165 RICECPDGFH----GPHCE 179 (188)
T ss_dssp SCEECCTTCB----TTTTC
T ss_pred CcccCcCCCC----CCCCc
Confidence 5788888884 56665
No 443
>3ssb_I IMPI alpha, inducible metalloproteinase inhibitor protein; thermolysin fold - family I8 fold, metalloprotease thermoLys inhibitor; 1.80A {Galleria mellonella}
Probab=47.95 E-value=8.8 Score=22.32 Aligned_cols=21 Identities=24% Similarity=0.686 Sum_probs=15.5
Q ss_pred EeCCCCCeecCCCCceecCcce
Q psy17325 53 CTCPPGEILSNDSVTCQDMNEC 74 (461)
Q Consensus 53 C~C~~G~~l~~~~~~C~d~~eC 74 (461)
|.|++||.... ...|...++|
T Consensus 7 C~C~~G~vrn~-~G~CV~~~~C 27 (32)
T 3ssb_I 7 CYCEDGYARDV-NGKCIPIKDC 27 (32)
T ss_dssp EEECTTEEECT-TSCEEEGGGC
T ss_pred CCcCCCcEECC-CCCEECHHHC
Confidence 78999998744 4468777766
No 444
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=47.94 E-value=2.3e+02 Score=28.50 Aligned_cols=15 Identities=13% Similarity=0.166 Sum_probs=12.5
Q ss_pred eEEeeccCCeeEEec
Q psy17325 242 GLTLDIATRRVYFAD 256 (461)
Q Consensus 242 glavD~~~~~ly~~d 256 (461)
++|+|+.++.+|+..
T Consensus 416 ~~a~dp~~g~~yv~~ 430 (582)
T 1flg_A 416 PMAYSQDTGLFYVPA 430 (582)
T ss_dssp CCEECTTTCCEEEEE
T ss_pred CceECCCCCEEEEec
Confidence 679999999998864
No 445
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=46.58 E-value=6.1 Score=40.29 Aligned_cols=34 Identities=26% Similarity=0.780 Sum_probs=23.8
Q ss_pred cceecCCccc--Cceee-ccCCccccCC-CCeeeeCCCCceee
Q psy17325 72 NECEQPGYCS--QMCTN-TKGSYICSCN-EGYVLEYDNHTCKA 110 (461)
Q Consensus 72 ~eC~~~~~C~--~~C~~-~~g~~~C~C~-~g~~l~~~~~~C~~ 110 (461)
++|. ..+|. ..|.+ ..++|.|.|+ +||. +..|..
T Consensus 2 d~C~-s~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce~ 39 (587)
T 3nt1_A 2 NPCC-SNPCQNRGECMSTGFDQYKCDCTRTGFY----GENCTT 39 (587)
T ss_dssp CTTT-TCCCCTTCEEEEEETTEEEEECTTSSEE----TTTTCE
T ss_pred CCCC-CCCCCCCCEeeCCCCCCeEEecCCCCcc----CCCCCC
Confidence 5664 34564 37885 4489999999 9994 677743
No 446
>2hr7_A Insulin receptor; hormone receptor, leucine rich repeat, transferase; HET: NAG BMA MAN FUC P33; 2.32A {Homo sapiens}
Probab=45.07 E-value=10 Score=37.73 Aligned_cols=59 Identities=27% Similarity=0.650 Sum_probs=31.1
Q ss_pred ceE--eCCCCCeecCCCCceecCcceec-CCccc----Cceeecc-CCccc--cCCCCeeeeCCCCceee
Q psy17325 51 ALC--TCPPGEILSNDSVTCQDMNECEQ-PGYCS----QMCTNTK-GSYIC--SCNEGYVLEYDNHTCKA 110 (461)
Q Consensus 51 ~~C--~C~~G~~l~~~~~~C~d~~eC~~-~~~C~----~~C~~~~-g~~~C--~C~~g~~l~~~~~~C~~ 110 (461)
..| .||+|+... .+..|....+|.. .+.|. ..|.+.. ....| .||+||....+...|..
T Consensus 235 g~Cv~~CP~g~y~~-~~~~C~~~~~C~~c~~~c~~~~~~sC~~~~~~~~~CV~~CP~g~~~~~~~~~C~~ 303 (486)
T 2hr7_A 235 GRCVETCPPPYYHF-QDWRCVNFSFCQDLHHKCKNSRRQGCHQYVIHNNKCIPECPSGYTMNSSNLLCTP 303 (486)
T ss_dssp TEEESSCCTTCEEE-TTTEEECHHHHHHHHHHHHHTCSSSCCCCEEETTEEESSCCTTEEECTTSCBEEE
T ss_pred CccccccCCCeEec-CCCEEecCcccccCCCcccCCCCcccccEeeECCEecccCCCCcccCCCCCcccc
Confidence 355 599998753 3567776556642 11121 1232211 22345 59999876654556654
No 447
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=44.52 E-value=23 Score=26.12 Aligned_cols=55 Identities=18% Similarity=0.361 Sum_probs=39.7
Q ss_pred CceeCC-CCceEeCCCCCeecCCCCceecCc--cee-cCCcccC--ceeecc-CCccccCCCCe
Q psy17325 43 TCHPTP-LGALCTCPPGEILSNDSVTCQDMN--ECE-QPGYCSQ--MCTNTK-GSYICSCNEGY 99 (461)
Q Consensus 43 ~C~~~~-~~~~C~C~~G~~l~~~~~~C~d~~--eC~-~~~~C~~--~C~~~~-g~~~C~C~~g~ 99 (461)
.|.... +.-.|.|..+|.. ++..|...+ .|. .+++|+. .|.... ..-.|.|...+
T Consensus 17 ~Cyr~~dg~EecRCllnykk--~~~kCV~~~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~ 78 (95)
T 1b9w_A 17 ACYRYLDGTEEWRCLLYFKE--DAGKCVPAPNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEG 78 (95)
T ss_dssp EEEECTTSCEEEEECTTEEE--ETTEEEECTTCCTTTGGGGSCTTSEEEECTTSCEEEECCSTT
T ss_pred CeEEEcCCCEEEEEECCeEe--cCCEEEcCCCCCccccCCCcCCCcceeecCCCcEEEECCCCC
Confidence 476654 5668999999986 466787654 676 5678964 787666 56778888765
No 448
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=43.98 E-value=8 Score=31.93 Aligned_cols=34 Identities=26% Similarity=0.717 Sum_probs=23.5
Q ss_pred Cccc--CceeeccCCccccCCCCeeeeCCCCceeeccccc
Q psy17325 78 GYCS--QMCTNTKGSYICSCNEGYVLEYDNHTCKAINHSA 115 (461)
Q Consensus 78 ~~C~--~~C~~~~g~~~C~C~~g~~l~~~~~~C~~~~~~~ 115 (461)
..|+ ..|.+..++|.|.|.+||. +..|..+.+|+
T Consensus 125 ~~C~~~g~C~~~~~~~~c~C~~g~~----g~~C~~~~~c~ 160 (164)
T 3cfw_A 125 WSCSGHGECVEIINNYTCNCDVGYY----GPQCQFVQVDP 160 (164)
T ss_dssp TSSCSSEEEEEETTEEEEEECTTCB----SSSSCBC----
T ss_pred CcCCCCCeecccCCCceeeeCCCcc----cccccccccCc
Confidence 3464 3788889999999999984 56786666654
No 449
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=43.76 E-value=1.8e+02 Score=26.15 Aligned_cols=101 Identities=6% Similarity=0.029 Sum_probs=53.3
Q ss_pred ceeeeeeeecCCeEEEEeCCCCeEEEEeCCCCc-------EEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEE
Q psy17325 150 LVEGLAYDWIGGHIYWLDSRLNRIEVCDENGTN-------RIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERI 222 (461)
Q Consensus 150 ~p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~-------~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~ 222 (461)
.+..+++.+. +++..+-..++.|.+.+++... ....+...-.....+++.|... +|.-+. ....|...
T Consensus 60 ~v~~v~~sp~-~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~--~las~s--~D~~v~iw 134 (330)
T 2hes_X 60 AIRSVAWRPH-TSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGY--YLATCS--RDKSVWIW 134 (330)
T ss_dssp CEEEEEECTT-SSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSC--EEEEEE--TTSCEEEE
T ss_pred CEEEEEECCC-CCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCC--EEEEEe--CCCEEEEE
Confidence 3556777664 4455565667888888874321 1122333334578899999755 555444 34567666
Q ss_pred ecC--CCCcEE--EEecccccceeEEeeccCCeeEEe
Q psy17325 223 GMD--GSNRST--IISTKIYWPNGLTLDIATRRVYFA 255 (461)
Q Consensus 223 ~~d--G~~~~~--i~~~~~~~P~glavD~~~~~ly~~ 255 (461)
++. +...+. .+.........+++.+.+..|.-+
T Consensus 135 d~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~ 171 (330)
T 2hes_X 135 ETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASS 171 (330)
T ss_dssp ECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEE
T ss_pred eccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEE
Confidence 663 222222 222233456778888765554443
No 450
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=43.40 E-value=2.1e+02 Score=26.76 Aligned_cols=67 Identities=9% Similarity=0.121 Sum_probs=38.6
Q ss_pred eeecCCeEEEEeCCCCeEEEEeCCCCcEEEEec--CCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCC
Q psy17325 156 YDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAK--DNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227 (461)
Q Consensus 156 vd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~--~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~ 227 (461)
+||..+++.-+ .-.+.|.+.+........++. ..-.....|++.|... +|.... ....|...++...
T Consensus 111 l~wS~~n~lAv-gld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~--~lasgs--~Dg~v~iWd~~~~ 179 (420)
T 4gga_A 111 VDWSSGNVLAV-ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGN--YLAVGT--SSAEVQLWDVQQQ 179 (420)
T ss_dssp EEECTTSEEEE-EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSS--EEEEEE--TTSCEEEEETTTT
T ss_pred EEECCCCEEEE-EeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCC--EEEEEE--CCCeEEEEEcCCC
Confidence 56655554333 235778888866444433333 2223468899999755 665544 3456777676543
No 451
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=42.55 E-value=1.7e+02 Score=29.48 Aligned_cols=110 Identities=19% Similarity=0.281 Sum_probs=65.6
Q ss_pred cceEEEcCccce-eeeeeeecCCeE--EE-EeCC-----------CCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCC
Q psy17325 140 AQDIVVSGLDLV-EGLAYDWIGGHI--YW-LDSR-----------LNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPG 204 (461)
Q Consensus 140 ~~~~~~~g~~~p-~~iavd~~~~~l--y~-~d~~-----------~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g 204 (461)
+..++..|.... .-.|+|+.+++| -| .|.. ++.+.++|.||.-+..++.+. .++|....
T Consensus 280 Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~Gs------~~iD~dG~ 353 (591)
T 2zux_A 280 PSLIMTRGYYAKTMLVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFGS------MAVDHDGK 353 (591)
T ss_dssp CEEEEEECCSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEETT------EEECTTSC
T ss_pred ceEEEeccccceeEEEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCCCCCCceEEEee------eEECCCCC
Confidence 334444443322 235788888854 34 3432 368999999988776666543 47886544
Q ss_pred ceEEEEeecCCCCcEEEEecCCCC--cEEEE-ecccccceeEE-eeccCCeeEEecC
Q psy17325 205 TRWLFWTDWGENPRIERIGMDGSN--RSTII-STKIYWPNGLT-LDIATRRVYFADS 257 (461)
Q Consensus 205 ~~~ly~td~~~~~~I~~~~~dG~~--~~~i~-~~~~~~P~gla-vD~~~~~ly~~d~ 257 (461)
.||-+..+....+...+++... .+++. .+.-..|.|.+ .|..++.++|.-.
T Consensus 354 --~L~st~~gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~ 408 (591)
T 2zux_A 354 --GMYSTGLGHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVY 408 (591)
T ss_dssp --EEEECSCCCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEEC
T ss_pred --EeeeCCCCCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcC
Confidence 5665555555788999998653 24443 23223455664 4667787777644
No 452
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=41.93 E-value=15 Score=34.74 Aligned_cols=41 Identities=44% Similarity=1.018 Sum_probs=32.3
Q ss_pred cCccee----cCCcccCceeeccCCccccCCCCeeeeCCCCceee
Q psy17325 70 DMNECE----QPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110 (461)
Q Consensus 70 d~~eC~----~~~~C~~~C~~~~g~~~C~C~~g~~l~~~~~~C~~ 110 (461)
+.++|. ....|.+.|.+..+++.|.|..++.+..+...|..
T Consensus 120 ~~~~c~~~~~~~~~~~~~c~n~~g~~~csC~~g~~l~~~~~~~~~ 164 (361)
T 4aqb_A 120 DVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRV 164 (361)
T ss_dssp ECCGGGTGGGSSSCCSSEEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred cccccccccccCCCCCccCCccCCCceeccCCCeEEecccccccc
Confidence 345554 23468899999999999999999999888777643
No 453
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=41.78 E-value=19 Score=23.35 Aligned_cols=23 Identities=17% Similarity=0.462 Sum_probs=15.2
Q ss_pred Ccee--CCCCceEeCCCCCeecCCCCcee
Q psy17325 43 TCHP--TPLGALCTCPPGEILSNDSVTCQ 69 (461)
Q Consensus 43 ~C~~--~~~~~~C~C~~G~~l~~~~~~C~ 69 (461)
.|.. ..+.+.|.|++||. +..|+
T Consensus 24 ~C~~i~~~~~~~C~C~~gy~----G~RCe 48 (50)
T 2rnl_A 24 ECKYIEHLEAVTCKCQQEYF----GERCG 48 (50)
T ss_dssp EEEEETTTTEEEEECCSSCC----SSSCC
T ss_pred EEEEecCCCCeeEECCCCcc----ccccc
Confidence 4653 33457899999995 55564
No 454
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=41.67 E-value=18 Score=27.49 Aligned_cols=55 Identities=20% Similarity=0.500 Sum_probs=34.2
Q ss_pred CccCCCCCCCCCCCCCCCCCC-------------CCCCC-CCCc-ccCCCCCCCC--CceeCC-CCceEeCCCCC
Q psy17325 3 DRCVNLTKVCDGKTDCPNGAD-------------EGPGC-DLAE-CKHKFGLCSN--TCHPTP-LGALCTCPPGE 59 (461)
Q Consensus 3 ~~Ci~~~~~Cd~~~dC~dg~d-------------e~~~C-~~~~-C~~~~~~C~~--~C~~~~-~~~~C~C~~G~ 59 (461)
..|+.. .|...+.|..-.+ ++..| ..++ |..++++|.. .|.... ..-.|.|..+|
T Consensus 11 h~C~~t--~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~ 83 (105)
T 1n1i_A 11 HKCIDT--NVPENAACYRYLDGTEEWRCLLGFKEVGGKCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKEG 83 (105)
T ss_dssp TSCCSS--CCCTTEEEEECTTSCEEEEECTTEEECSSSEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTT
T ss_pred cEecCC--CCCCCCCeEECCCCCEeEEEECCeeccCCEEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCC
Confidence 346533 5666666654333 22345 2355 8778888864 588774 66789999987
No 455
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=41.13 E-value=2e+02 Score=25.74 Aligned_cols=101 Identities=7% Similarity=-0.020 Sum_probs=52.5
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcE--EEEecCCCCCceeEEEcCC-CCceEEEEeecCCCCcEEEEecCCC
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNR--IVLAKDNITQPRGMMLDPS-PGTRWLFWTDWGENPRIERIGMDGS 227 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~--~~l~~~~~~~p~~ia~d~~-~g~~~ly~td~~~~~~I~~~~~dG~ 227 (461)
+..+++++.+ ++..+-..++.|.+.++..... ...+.+.-.....+++.+. .+ .++.+- +....|..-++...
T Consensus 16 V~~v~~s~~g-~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~--~~l~s~-s~D~~v~iWd~~~~ 91 (316)
T 3bg1_A 16 IHDAQMDYYG-TRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYG--NILASC-SYDRKVIIWREENG 91 (316)
T ss_dssp EEEEEECGGG-CEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGS--SCEEEE-ETTSCEEEECCSSS
T ss_pred EEEeeEcCCC-CEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCC--CEEEEE-ECCCEEEEEECCCC
Confidence 4567777644 4455556678888888764432 1223333345678888643 23 344443 23456666666533
Q ss_pred C-cEE-EEecccccceeEEeeccC-CeeEEe
Q psy17325 228 N-RST-IISTKIYWPNGLTLDIAT-RRVYFA 255 (461)
Q Consensus 228 ~-~~~-i~~~~~~~P~glavD~~~-~~ly~~ 255 (461)
. ... .+.........+++.+.. +.++.+
T Consensus 92 ~~~~~~~~~~h~~~V~~v~~~p~~~g~~las 122 (316)
T 3bg1_A 92 TWEKSHEHAGHDSSVNSVCWAPHDYGLILAC 122 (316)
T ss_dssp CCCEEEEECCCSSCCCEEEECCTTTCSCEEE
T ss_pred cceEEEEccCCCCceEEEEECCCCCCcEEEE
Confidence 2 222 122223356778887653 333333
No 456
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=40.69 E-value=2.1e+02 Score=26.07 Aligned_cols=68 Identities=6% Similarity=0.060 Sum_probs=38.0
Q ss_pred eeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCC
Q psy17325 152 EGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGS 227 (461)
Q Consensus 152 ~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~ 227 (461)
..+++.+..+.+.++-...+.|.+.+.........+.. .....++++++. .++.+. ...|...++...
T Consensus 62 ~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~-~~~v~~v~~~~~----~~~~~~---~~~i~i~d~~~~ 129 (355)
T 3vu4_A 62 SKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIKV-DAPVKDLFLSRE----FIVVSY---GDVISVFKFGNP 129 (355)
T ss_dssp CEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEEC-SSCEEEEEECSS----EEEEEE---TTEEEEEESSTT
T ss_pred EEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEEC-CCceEEEEEcCC----EEEEEE---cCEEEEEECCCC
Confidence 33455555566666666677899988654433222221 134677777754 444443 235666666543
No 457
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=40.65 E-value=3.2e+02 Score=28.07 Aligned_cols=16 Identities=19% Similarity=0.279 Sum_probs=12.9
Q ss_pred eEEeeccCCeeEEecC
Q psy17325 242 GLTLDIATRRVYFADS 257 (461)
Q Consensus 242 glavD~~~~~ly~~d~ 257 (461)
++|+|+.++.||+...
T Consensus 393 ~~a~dp~~~~~yv~~~ 408 (689)
T 1yiq_A 393 PMSYNPDTGLVYIPAH 408 (689)
T ss_dssp CCEEETTTTEEEEEEE
T ss_pred cceECCCCCEEEEecc
Confidence 4899999999998643
No 458
>2p3f_N Anti-coagulant protein 5; factor XA, hydrolase; 3.10A {Ancylostoma caninum}
Probab=36.99 E-value=16 Score=26.18 Aligned_cols=25 Identities=24% Similarity=0.534 Sum_probs=18.8
Q ss_pred ceEeCCCCCeecCCCCceecCccee
Q psy17325 51 ALCTCPPGEILSNDSVTCQDMNECE 75 (461)
Q Consensus 51 ~~C~C~~G~~l~~~~~~C~d~~eC~ 75 (461)
.-|.|++||.+......|...++|.
T Consensus 47 ~GC~C~~G~vr~~~~g~CV~~~~Cp 71 (78)
T 2p3f_N 47 PACVCKDGFYRDTVIGDCVREEECD 71 (78)
T ss_dssp CEEEECSSCEEETTTTEEECGGGCC
T ss_pred CCcCcCCCEeEcCCCCceECHHHCC
Confidence 3599999999865535788777773
No 459
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=36.97 E-value=11 Score=27.07 Aligned_cols=12 Identities=33% Similarity=0.753 Sum_probs=8.4
Q ss_pred CCceEeCCCCCe
Q psy17325 49 LGALCTCPPGEI 60 (461)
Q Consensus 49 ~~~~C~C~~G~~ 60 (461)
+.+.|.|++||.
T Consensus 60 ~~~~C~C~~GYt 71 (79)
T 1xdt_R 60 RAPSCICHPGYH 71 (79)
T ss_dssp TBCCEEECTTEE
T ss_pred CCeEEEcCCCcc
Confidence 456777777775
No 460
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=36.92 E-value=36 Score=36.73 Aligned_cols=56 Identities=25% Similarity=0.615 Sum_probs=30.1
Q ss_pred eCCCCCeecCCCCceecCcceec-CCcccC----ceeecc-CCccc--cCCCCeeeeCCCCceee
Q psy17325 54 TCPPGEILSNDSVTCQDMNECEQ-PGYCSQ----MCTNTK-GSYIC--SCNEGYVLEYDNHTCKA 110 (461)
Q Consensus 54 ~C~~G~~l~~~~~~C~d~~eC~~-~~~C~~----~C~~~~-g~~~C--~C~~g~~l~~~~~~C~~ 110 (461)
.||+|+... .+..|...++|.. ...|.. .|.+.. ....| .||.||....+...|..
T Consensus 240 ~Cp~~~y~~-~~~~C~~~~~C~~~~~~c~~~~~~~c~~~~~~~~~Cv~~CP~g~~~~~~~~~C~~ 303 (897)
T 2dtg_E 240 TCPPPYYHF-QDWRCVNFSFCQDLHHKCKNSRRQGCHQYVIHNNKCIPECPSGYTMNSSNLLCTP 303 (897)
T ss_dssp SCCSSCCCC-TTSBCCCHHHHHHHSSCCCSTTTTSCCCCEEETTEEESSCCSSCEECSSSCBEEC
T ss_pred hcCCceeEe-cCcEEcChhHhhccCccccCCCcccccceeeECCEEccCCCCCccccCCCCeecc
Confidence 588887532 3677876667752 112221 232221 22345 59999876544455643
No 461
>1ccv_A AMCI, chymotrypsin inhibitor; protein inhibitor, hemolymph, canonical inhibitor, hydrolase inhibitor; NMR {Apis mellifera} SCOP: g.22.1.1
Probab=35.71 E-value=17 Score=23.94 Aligned_cols=30 Identities=23% Similarity=0.695 Sum_probs=19.4
Q ss_pred CCCCCceeCCCCceEeCCCCCeecCCCCceecCcce
Q psy17325 39 LCSNTCHPTPLGALCTCPPGEILSNDSVTCQDMNEC 74 (461)
Q Consensus 39 ~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~d~~eC 74 (461)
.|...|.. -|.|++||.+..+ ..|...++|
T Consensus 27 ~C~~~C~~-----GC~C~~G~v~~~~-g~CV~~~~C 56 (56)
T 1ccv_A 27 ICTMQCRI-----GCQCQEGFLRNGE-GACVLPENC 56 (56)
T ss_dssp CSSSSCEE-----EEEECTTCEEETT-TEEECGGGC
T ss_pred CCcCcCCC-----CCcCCCCeeECCC-CcccChhhC
Confidence 45555642 3899999988543 467665554
No 462
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=34.26 E-value=4.1e+02 Score=27.44 Aligned_cols=77 Identities=17% Similarity=0.095 Sum_probs=48.7
Q ss_pred eeeeeeecC-CeEEEEeCC-----CCeEEEEeCCCCcEEEEecCCCCCce-eEEEcCCCCceEEEEeecCCCCcEEEEec
Q psy17325 152 EGLAYDWIG-GHIYWLDSR-----LNRIEVCDENGTNRIVLAKDNITQPR-GMMLDPSPGTRWLFWTDWGENPRIERIGM 224 (461)
Q Consensus 152 ~~iavd~~~-~~ly~~d~~-----~~~I~~~~~~G~~~~~l~~~~~~~p~-~ia~d~~~g~~~ly~td~~~~~~I~~~~~ 224 (461)
..|++|+.. +++|++-.. .+.|++..-.|..-+.+.. . ..|. .|+++|... +.||+.. ....|++..=
T Consensus 93 ~~IavdP~dp~~vyvag~~~~~~~~g~v~rS~DgG~TW~~~~~-p-~~~~~~l~~~P~~~-~~l~a~~--~~~gly~S~D 167 (685)
T 3f6k_A 93 FGMAIGPENSGKVVLTAEVSGGSRGGRIFRSSDFAKNFVQTDL-P-FHPLTQMMYSPQNS-DYLLALS--TENGLWVSKN 167 (685)
T ss_dssp GCEEECSTTCCCEEEEECCCTTCSSCEEEEESSTTSSCEEEEC-S-SCBSSCCEEETTEE-EEEEEEB--TTCCEEEESS
T ss_pred eEEEECCCCCCEEEEEEeccCCCCCceEEEECCCCceeEeccC-C-CCCceEEEEecCCC-CEEEEEE--CCCCEEEEeC
Confidence 468999865 478888642 5778887766765444332 1 2233 699998643 2667654 3468888666
Q ss_pred CCCCcEEEE
Q psy17325 225 DGSNRSTII 233 (461)
Q Consensus 225 dG~~~~~i~ 233 (461)
.|...+.+.
T Consensus 168 gG~TW~~i~ 176 (685)
T 3f6k_A 168 FGGKWEEIH 176 (685)
T ss_dssp TTSSEEEEE
T ss_pred CCCCcEEee
Confidence 676666554
No 463
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=30.28 E-value=4.7e+02 Score=26.89 Aligned_cols=95 Identities=12% Similarity=0.005 Sum_probs=47.8
Q ss_pred eeeeeeeecCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcE
Q psy17325 151 VEGLAYDWIGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRS 230 (461)
Q Consensus 151 p~~iavd~~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~ 230 (461)
...+..| ..++||+.-. +.+.+.+.................+.|+. ..| .|+++. . ..|.+.+......+
T Consensus 65 i~~i~~d-~~g~lWigT~--~Gl~~yd~~~~~f~~~~~~~~~~i~~i~~--~~g--~lWigt-~--~Gl~~~~~~~~~~~ 134 (758)
T 3ott_A 65 IYCGVII-DNTYLYMGTD--NGILVYNYRADRYEQPETDFPTDVRTMAL--QGD--TLWLGA-L--NGLYTYQLQSRKLT 134 (758)
T ss_dssp EEEEEEE-TTTEEEEEET--TEEEEEETTTTEECCCSCCCCSCEEEEEE--ETT--EEEEEE-T--TEEEEEETTTCCEE
T ss_pred EEEEEEc-CCCcEEEEeC--CCeEEEeCCCCEEECcccCCCceEEEEEe--cCC--cEEEEc-C--CcceeEeCCCCeEE
Confidence 4456666 3567777643 46778776543221111111112344543 246 788765 2 37888877654433
Q ss_pred EEEec--cc--ccceeEEeeccCCeeEEec
Q psy17325 231 TIIST--KI--YWPNGLTLDIATRRVYFAD 256 (461)
Q Consensus 231 ~i~~~--~~--~~P~glavD~~~~~ly~~d 256 (461)
.+... .+ .....|+.|. .++||++.
T Consensus 135 ~~~~~~~~l~~~~i~~i~~d~-~g~lWigt 163 (758)
T 3ott_A 135 SFDTRRNGLPNNTIYSIIRTK-DNQIYVGT 163 (758)
T ss_dssp EECHHHHCCSCSCEEEEEECT-TCCEEEEE
T ss_pred EeccCCCCcCCCeEEEEEEcC-CCCEEEEe
Confidence 33111 11 2245666774 56676654
No 464
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=29.96 E-value=19 Score=23.24 Aligned_cols=18 Identities=28% Similarity=0.708 Sum_probs=13.3
Q ss_pred CCCceEeCCCCCeecCCCCcee
Q psy17325 48 PLGALCTCPPGEILSNDSVTCQ 69 (461)
Q Consensus 48 ~~~~~C~C~~G~~l~~~~~~C~ 69 (461)
.+.+.|.|++||. |..|+
T Consensus 27 ~~~~~C~C~~gy~----G~RCe 44 (50)
T 1iox_A 27 EQTPSCVCDEGYI----GARCE 44 (50)
T ss_dssp TTEEEECCCTTEE----TTTTC
T ss_pred CCCeEEECCCCcc----cCCCC
Confidence 3557899999995 56665
No 465
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=29.87 E-value=3.4e+02 Score=25.11 Aligned_cols=72 Identities=8% Similarity=-0.018 Sum_probs=44.6
Q ss_pred eeeeeeee-------cCCeEEEEeCCCCeEEEEeCCCCcEEEEecCCCCCceeEEEcCCCCceEEEEeecCCCCcEEEEe
Q psy17325 151 VEGLAYDW-------IGGHIYWLDSRLNRIEVCDENGTNRIVLAKDNITQPRGMMLDPSPGTRWLFWTDWGENPRIERIG 223 (461)
Q Consensus 151 p~~iavd~-------~~~~ly~~d~~~~~I~~~~~~G~~~~~l~~~~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~ 223 (461)
+..+++.+ ..+++..+-+.++.|.+.++............-.....+++.|..+ .++.+- .....|...+
T Consensus 139 v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~--~~l~~~-~~d~~v~~wd 215 (393)
T 4gq1_A 139 VNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNP--NQLIVG-ERNGNIRIFD 215 (393)
T ss_dssp EEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEE--EEEEEE-ETTSEEEEEE
T ss_pred eEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCC--ceEEec-CCCCEEEEEE
Confidence 45566654 2467888888889999999754433322222224577899998754 555554 3445666666
Q ss_pred cC
Q psy17325 224 MD 225 (461)
Q Consensus 224 ~d 225 (461)
+.
T Consensus 216 ~~ 217 (393)
T 4gq1_A 216 WT 217 (393)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 466
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=29.86 E-value=20 Score=30.46 Aligned_cols=27 Identities=30% Similarity=0.828 Sum_probs=18.1
Q ss_pred cccCceeec---cCCccccCCCCeeeeCCCCcee
Q psy17325 79 YCSQMCTNT---KGSYICSCNEGYVLEYDNHTCK 109 (461)
Q Consensus 79 ~C~~~C~~~---~g~~~C~C~~g~~l~~~~~~C~ 109 (461)
.|.+.|.|. .+..+|.|++||. +..|.
T Consensus 150 ~C~~~C~ngG~Cv~P~~C~C~~Gw~----G~~C~ 179 (188)
T 2ygo_A 150 ECPGGCRNGGFCNERRICECPDGFH----GPHCE 179 (188)
T ss_dssp CCTTCCCTTCEECTTSCEECCTTCB----TTTTC
T ss_pred ccCCCCCCCCEeCCCCcccCcCCCC----CCCCc
Confidence 455555554 2456899999994 66774
No 467
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=29.67 E-value=37 Score=25.50 Aligned_cols=56 Identities=27% Similarity=0.636 Sum_probs=35.0
Q ss_pred CccCCCCCCCCCCCCCCCCCCC-------------CCCCCC---CcccCCCCCCCC--CceeCC-----CCceEeCCCCC
Q psy17325 3 DRCVNLTKVCDGKTDCPNGADE-------------GPGCDL---AECKHKFGLCSN--TCHPTP-----LGALCTCPPGE 59 (461)
Q Consensus 3 ~~Ci~~~~~Cd~~~dC~dg~de-------------~~~C~~---~~C~~~~~~C~~--~C~~~~-----~~~~C~C~~G~ 59 (461)
..||. ..|...+.|....+. +..|.. +.|..+++.|.. .|.... +...|.|.+||
T Consensus 5 h~C~~--~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~ 82 (99)
T 1ob1_C 5 HQCVK--KQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPD 82 (99)
T ss_dssp TCCCS--CCCCTTEEEECCTTSCCEEEECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTT
T ss_pred eEecc--CCCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCC
Confidence 34654 456666666553322 234522 478888888864 587764 45789999987
Q ss_pred e
Q psy17325 60 I 60 (461)
Q Consensus 60 ~ 60 (461)
.
T Consensus 83 ~ 83 (99)
T 1ob1_C 83 S 83 (99)
T ss_dssp C
T ss_pred c
Confidence 3
No 468
>1ata_A Ascaris trypsin inhibitor; proteinase inhibitor(trypsin); NMR {Ascaris suum} SCOP: g.22.1.1 PDB: 1atb_A 1atd_A 1ate_A
Probab=29.47 E-value=57 Score=22.00 Aligned_cols=32 Identities=22% Similarity=0.683 Sum_probs=20.7
Q ss_pred CCCCCCceeCCCCceEeCC--CCCeecCCCCceecCcce
Q psy17325 38 GLCSNTCHPTPLGALCTCP--PGEILSNDSVTCQDMNEC 74 (461)
Q Consensus 38 ~~C~~~C~~~~~~~~C~C~--~G~~l~~~~~~C~d~~eC 74 (461)
..|...|. ..-|.|+ +||.+..+ ..|...++|
T Consensus 27 ~~C~~~C~----~~gC~C~~~~G~vr~~~-g~CV~~~~C 60 (62)
T 1ata_A 27 VPCTRECK----PPRCECIASAGFVRDAQ-GNCIKFEDC 60 (62)
T ss_dssp CCCSCCCC----CSEEECCTTTTEEEETT-TEEEESTTS
T ss_pred CCCcCccC----CCCcCcCCCCCeEECCC-CCEECHHHC
Confidence 45655563 2359999 99987543 467766665
No 469
>1hvw_A Omega-ACTX-HV1A, omega-atracotoxin-HV1A; cystine knot, beta-hairpin; NMR {Synthetic} SCOP: g.3.6.2
Probab=29.25 E-value=21 Score=19.34 Aligned_cols=15 Identities=20% Similarity=0.629 Sum_probs=9.7
Q ss_pred cCCCCCCCCCCCCCC
Q psy17325 5 CVNLTKVCDGKTDCP 19 (461)
Q Consensus 5 Ci~~~~~Cd~~~dC~ 19 (461)
|++..+.|.....|=
T Consensus 1 C~psgq~Cp~~e~CC 15 (26)
T 1hvw_A 1 CIPSGQPCPYNENCC 15 (26)
T ss_dssp CBCTTSBCSSTTSBS
T ss_pred CccCCCcCCCCcccc
Confidence 677777777655553
No 470
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=28.29 E-value=36 Score=38.20 Aligned_cols=36 Identities=17% Similarity=0.409 Sum_probs=27.1
Q ss_pred CcccCCCCCCCCCceeCCCCceEeCC-CCCeecCCCCceec
Q psy17325 31 AECKHKFGLCSNTCHPTPLGALCTCP-PGEILSNDSVTCQD 70 (461)
Q Consensus 31 ~~C~~~~~~C~~~C~~~~~~~~C~C~-~G~~l~~~~~~C~d 70 (461)
+.|.++++.-...|.....+|.|.|+ +||. +..|+.
T Consensus 620 ~~C~~~pC~ngg~C~~~~~~~~C~C~~~g~~----G~~C~~ 656 (1245)
T 3qcw_A 620 KPCLSNPCKNNGMCRDGWNRYVCDCSGTGYL----GRSCER 656 (1245)
T ss_dssp CGGGSCCCCTTCEEEECSSSEEEECTTTTEE----STTSCE
T ss_pred CCCCccCCCCCCEEeCCCCCeEEECCCCCcc----cccCcc
Confidence 57876654445579998899999999 7985 567753
No 471
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=27.69 E-value=36 Score=32.05 Aligned_cols=33 Identities=36% Similarity=0.648 Sum_probs=28.0
Q ss_pred CCCCCCCceeCCCCceEeCCCCCeecCCCCcee
Q psy17325 37 FGLCSNTCHPTPLGALCTCPPGEILSNDSVTCQ 69 (461)
Q Consensus 37 ~~~C~~~C~~~~~~~~C~C~~G~~l~~~~~~C~ 69 (461)
...|.+.|.+..+++.|.|..|+.+..+...|.
T Consensus 131 ~~~~~~~c~n~~g~~~csC~~g~~l~~~~~~~~ 163 (361)
T 4aqb_A 131 ELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCR 163 (361)
T ss_dssp SSCCSSEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred CCCCCccCCccCCCceeccCCCeEEeccccccc
Confidence 456888999999999999999999877766664
No 472
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=27.44 E-value=32 Score=38.67 Aligned_cols=35 Identities=17% Similarity=0.350 Sum_probs=21.2
Q ss_pred CcccCCCCCCCCCceeCCCCceEeCC-CCCeecCCCCcee
Q psy17325 31 AECKHKFGLCSNTCHPTPLGALCTCP-PGEILSNDSVTCQ 69 (461)
Q Consensus 31 ~~C~~~~~~C~~~C~~~~~~~~C~C~-~G~~l~~~~~~C~ 69 (461)
+.|..+++.....|.....+|.|.|+ +||. +..|+
T Consensus 1018 ~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~----G~~C~ 1053 (1245)
T 3qcw_A 1018 TTCQEDSCSNQGVCLQQWDGFSCDCSMTSFS----GPLCN 1053 (1245)
T ss_dssp CCCCTTSSSSSCEEEEETTEEEEECTTSSCB----STTSC
T ss_pred CceECCcCCCCCEeCCCCCCCEEECCCCCCC----CCCcc
Confidence 45655443334467777777778887 5774 45564
No 473
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=26.52 E-value=3.6e+02 Score=24.35 Aligned_cols=178 Identities=11% Similarity=-0.010 Sum_probs=84.0
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCcEEEE-ecC--CCCCceeEEEcCCCCceEEEEeecCCCCcEEEEecCCCCcEEEEec-
Q psy17325 160 GGHIYWLDSRLNRIEVCDENGTNRIVL-AKD--NITQPRGMMLDPSPGTRWLFWTDWGENPRIERIGMDGSNRSTIIST- 235 (461)
Q Consensus 160 ~~~ly~~d~~~~~I~~~~~~G~~~~~l-~~~--~~~~p~~ia~d~~~g~~~ly~td~~~~~~I~~~~~dG~~~~~i~~~- 235 (461)
.+.+|++- ..+.|.+..-.|..=+.+ ... .-....+|++++ + .+|.+- ....|++..=.|...+.+...
T Consensus 46 ~~~~~~~G-~~g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~--~--~~~~~g--~~g~i~~S~DgG~tW~~~~~~~ 118 (327)
T 2xbg_A 46 RHHGWLVG-VNATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQG--N--EGWIVG--EPPIMLHTTDGGQSWSQIPLDP 118 (327)
T ss_dssp SSCEEEEE-TTTEEEEESSTTSSCEECCCCCSCCCCEEEEEEEET--T--EEEEEE--ETTEEEEESSTTSSCEECCCCT
T ss_pred CCcEEEEc-CCCeEEEeCCCCCCCeECCCCCCCCCccEEEEEecC--C--eEEEEE--CCCeEEEECCCCCCceECcccc
Confidence 34455543 345666654334332222 111 112356788886 4 566543 345677744335555544321
Q ss_pred cc-ccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEEeCCCCceEEEEeCCe
Q psy17325 236 KI-YWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKANMDGSNASILVSGQL 314 (461)
Q Consensus 236 ~~-~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~~~~g~~~~~l~~~~~ 314 (461)
.+ ..+..|++.. .+++|.+... +.|++..-.|..-+.+.....
T Consensus 119 ~~~~~~~~i~~~~-~~~~~~~~~~-----------------------------------g~v~~S~DgG~tW~~~~~~~~ 162 (327)
T 2xbg_A 119 KLPGSPRLIKALG-NGSAEMITNV-----------------------------------GAIYRTKDSGKNWQALVQEAI 162 (327)
T ss_dssp TCSSCEEEEEEEE-TTEEEEEETT-----------------------------------CCEEEESSTTSSEEEEECSCC
T ss_pred CCCCCeEEEEEEC-CCCEEEEeCC-----------------------------------ccEEEEcCCCCCCEEeecCCC
Confidence 11 2355666543 4566655432 124544333443333332111
Q ss_pred --eeeEEEeccCCeEEEeecCceeeEEEeecCCCCceEEEeec-CCCeEEEeeCCCCCceeEEEecCCCeEEEEcCCCCe
Q psy17325 315 --YEALALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMD-GSNRSTIISTKIYWPNGLTLDIATRRVYFADSKLDF 391 (461)
Q Consensus 315 --p~~iavd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~d-G~~~~~l~~~~l~~p~glaiD~~~~~ly~~d~~~~~ 391 (461)
..++++++. +.+|.... .+.|++..-+ |..-+.+....-.....|+++ .++++|.+-. .+.
T Consensus 163 ~~~~~~~~~~~-~~~~~~g~-------------~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~-~~g~~~~~~~-~G~ 226 (327)
T 2xbg_A 163 GVMRNLNRSPS-GEYVAVSS-------------RGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFT-PDGRLWMIVN-GGK 226 (327)
T ss_dssp CCEEEEEECTT-SCEEEEET-------------TSSEEEEECTTCSSCEEEECCSSSCEEEEEEC-TTSCEEEEET-TTE
T ss_pred cceEEEEEcCC-CcEEEEEC-------------CCcEEEEeCCCCCceeECCCCCCCccceeEEC-CCCCEEEEeC-Cce
Confidence 567777764 44443221 3456665433 444444432222345677776 4567776643 345
Q ss_pred EEEEE
Q psy17325 392 IDFCN 396 (461)
Q Consensus 392 I~~~~ 396 (461)
+.+..
T Consensus 227 ~~~s~ 231 (327)
T 2xbg_A 227 IAFSD 231 (327)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 55543
No 474
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=26.27 E-value=5.1e+02 Score=26.07 Aligned_cols=96 Identities=18% Similarity=0.302 Sum_probs=55.4
Q ss_pred eeeEEeCCCCceEEEEeCCe---eeeEEEeccCCeE--EEe-ecCceeeEEEeec-C-CCCceEEEeecCCCeEEEeeCC
Q psy17325 295 KIGKANMDGSNASILVSGQL---YEALALDLENGML--YYS-TLKCTRWLFWTDW-G-ENPRIERIGMDGSNRSTIISTK 366 (461)
Q Consensus 295 ~I~~~~~~g~~~~~l~~~~~---p~~iavd~~~~~l--Y~t-~~~~~~~l~~~d~-~-~~~~I~~~~~dG~~~~~l~~~~ 366 (461)
.+.++.+||....+++..+. -.-.|+|..+++| -|. +....+. ..+ + .++.+..+++||-.+..|+..
T Consensus 269 ~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~~d~~~~~~---~~~~gqg~h~~~vaDVDgDG~dEIv~G- 344 (591)
T 2zux_A 269 LAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWTLDSSKSGN---EAFAGQGNHNLSIADVDGDGKDEIIFG- 344 (591)
T ss_dssp EEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEEEETTSTTC---GGGSSCCCSCCEEECCSSSSSCEEEET-
T ss_pred eeeEEECCCCCceEEEeccccceeEEEEEECCCCceEEEEEecCCCCCc---ccccccCCCCCeeEeCCCCCCceEEEe-
Confidence 46778899998887776544 2245677777765 342 1110000 001 1 236788899988887777632
Q ss_pred CCCceeEEEecCCCeEEEEcC-C-CCeEEEEEecCC
Q psy17325 367 IYWPNGLTLDIATRRVYFADS-K-LDFIDFCNYDGT 400 (461)
Q Consensus 367 l~~p~glaiD~~~~~ly~~d~-~-~~~I~~~~~~g~ 400 (461)
+.++| .+|.+.|+-. + ...+...++|++
T Consensus 345 -----s~~iD-~dG~~L~st~~gHGDa~hv~dldP~ 374 (591)
T 2zux_A 345 -----SMAVD-HDGKGMYSTGLGHGDALHTGDLDPG 374 (591)
T ss_dssp -----TEEEC-TTSCEEEECSCCCCSCEEEECCCTT
T ss_pred -----eeEEC-CCCCEeeeCCCCCCCeeEEeecCCC
Confidence 24788 5555555532 2 235677777554
No 475
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=25.83 E-value=3.5e+02 Score=23.97 Aligned_cols=74 Identities=14% Similarity=0.113 Sum_probs=42.8
Q ss_pred eeeeeeeec-CCeEEEEeCCCCeEEEEeCCCCc--EEEEecCCCCCceeEEEcCCC-CceEEEEeecCCCCcEEEEecCC
Q psy17325 151 VEGLAYDWI-GGHIYWLDSRLNRIEVCDENGTN--RIVLAKDNITQPRGMMLDPSP-GTRWLFWTDWGENPRIERIGMDG 226 (461)
Q Consensus 151 p~~iavd~~-~~~ly~~d~~~~~I~~~~~~G~~--~~~l~~~~~~~p~~ia~d~~~-g~~~ly~td~~~~~~I~~~~~dG 226 (461)
+..+++.+. .+++..+-..++.|.+.++.... ....+...-.....+++.|.. + .++.+- +....|...++.+
T Consensus 60 V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g--~~lasg-s~D~~i~lwd~~~ 136 (316)
T 3bg1_A 60 VWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYG--LILACG-SSDGAISLLTYTG 136 (316)
T ss_dssp EEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTC--SCEEEE-CSSSCEEEEEECS
T ss_pred EEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCC--cEEEEE-cCCCCEEEEecCC
Confidence 445555432 35666677778889999876432 222233333457889998863 4 444443 3445666666654
Q ss_pred C
Q psy17325 227 S 227 (461)
Q Consensus 227 ~ 227 (461)
.
T Consensus 137 ~ 137 (316)
T 3bg1_A 137 E 137 (316)
T ss_dssp S
T ss_pred C
Confidence 3
No 476
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=25.66 E-value=4.9e+02 Score=25.57 Aligned_cols=225 Identities=6% Similarity=-0.088 Sum_probs=0.0
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCcE----EEEecCCCCCceeEEEcCC-----CCceEEEEeecCCCCcEEEEecCCCCcE
Q psy17325 160 GGHIYWLDSRLNRIEVCDENGTNR----IVLAKDNITQPRGMMLDPS-----PGTRWLFWTDWGENPRIERIGMDGSNRS 230 (461)
Q Consensus 160 ~~~ly~~d~~~~~I~~~~~~G~~~----~~l~~~~~~~p~~ia~d~~-----~g~~~ly~td~~~~~~I~~~~~dG~~~~ 230 (461)
.+.++.+-+..+.|.+.++++... ...+.........+++.|. .+ .+..+- +....|...++......
T Consensus 172 ~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~--~~LAs~-s~DgtvrlWd~~~~~~~ 248 (524)
T 2j04_B 172 HLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLV--GCLSFV-SQEGTINFLEIIDNATD 248 (524)
T ss_dssp ----------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSS--CEEEEE-ETTSCEEEEECCCCSSS
T ss_pred hhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCC--ceEEEE-ecCCeEEEEEcCCCccc
Q ss_pred -----------EEEecccccceeEEeeccCCeeEEecCCCceeeecccceeeeeccceeeeEEEEEecCCCCcceeeeEE
Q psy17325 231 -----------TIISTKIYWPNGLTLDIATRRVYFADSKLDFIDCKSLEIKTNVNYSTIFRKLYWIDEGGNGVPLKIGKA 299 (461)
Q Consensus 231 -----------~i~~~~~~~P~glavD~~~~~ly~~d~~~~~i~~~~~~~~~~v~~~~~~~~~yw~d~~~~~~~~~I~~~ 299 (461)
..+...-.....+++.+.+ .|..+.... +|...
T Consensus 249 ~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~Dg-----------------------------------tV~lW 292 (524)
T 2j04_B 249 VHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNG-----------------------------------FVAEF 292 (524)
T ss_dssp SSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTS-----------------------------------EEEEE
T ss_pred cccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCC-----------------------------------EEEEE
Q ss_pred eCC-CCceEEEEeCCe--eeeE--EEeccCCeEEEeecCceeeEEEeecCCCCceEEEeecCCCeEEEeeCCCC--Ccee
Q psy17325 300 NMD-GSNASILVSGQL--YEAL--ALDLENGMLYYSTLKCTRWLFWTDWGENPRIERIGMDGSNRSTIISTKIY--WPNG 372 (461)
Q Consensus 300 ~~~-g~~~~~l~~~~~--p~~i--avd~~~~~lY~t~~~~~~~l~~~d~~~~~~I~~~~~dG~~~~~l~~~~l~--~p~g 372 (461)
++. +......+.... ...| +..+.+..++.|-+. .+.|..-++.............. ....
T Consensus 293 D~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~------------D~tvklWD~~~~~~~~~~~~~~~~~~v~~ 360 (524)
T 2j04_B 293 DLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV------------DGYFYIFNPKDIATTKTTVSRFRGSNLVP 360 (524)
T ss_dssp ETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEET------------TSEEEEECGGGHHHHCEEEEECSCCSCCC
T ss_pred ECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEecc------------CCeEEEEECCCCCcccccccccccCcccc
Q ss_pred EEEecCCCeEEEEcCCCCeEEEEEecCCCCeEEEEEccccceeeccCCCCCcceEEEeeeCCEEEEEeCCCceeec
Q psy17325 373 LTLDIATRRVYFADSKLDFIDFCNYDGTGRQQVILIDLMVEFTNDLMGDNGVPALALDLENGMLYYSTEGAEFLKT 448 (461)
Q Consensus 373 laiD~~~~~ly~~d~~~~~I~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lYwtd~~~~~i~~ 448 (461)
|++. .++..+.+-...+.|...++ .++.....+........ .+++.+ ++.+..+-...++|++
T Consensus 361 v~fs-p~~~~l~s~~~d~tv~lwd~-~~~~~~~~l~gH~~~V~----------sva~Sp-~g~~l~Sgs~Dgtv~l 423 (524)
T 2j04_B 361 VVYC-PQIYSYIYSDGASSLRAVPS-RAAFAVHPLVSRETTIT----------AIGVSR-LHPMVLAGSADGSLII 423 (524)
T ss_dssp EEEE-TTTTEEEEECSSSEEEEEET-TCTTCCEEEEECSSCEE----------EEECCS-SCCBCEEEETTTEEEC
T ss_pred eEeC-CCcCeEEEeCCCCcEEEEEC-cccccceeeecCCCceE----------EEEeCC-CCCeEEEEECCCEEEE
No 477
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=21.72 E-value=59 Score=25.29 Aligned_cols=51 Identities=18% Similarity=0.357 Sum_probs=30.5
Q ss_pred CceeCC--CCc-eEeCCCCCeecCCCCceec-Cc-ceecCCcccCceeeccCCccccCCCCeeeeCCCCceee
Q psy17325 43 TCHPTP--LGA-LCTCPPGEILSNDSVTCQD-MN-ECEQPGYCSQMCTNTKGSYICSCNEGYVLEYDNHTCKA 110 (461)
Q Consensus 43 ~C~~~~--~~~-~C~C~~G~~l~~~~~~C~d-~~-eC~~~~~C~~~C~~~~g~~~C~C~~g~~l~~~~~~C~~ 110 (461)
.|.+.. .++ .|.|++||. +..|+. ++ +|.. .....|.+.|..++ .++.|..
T Consensus 8 tC~~~~~~~~~~~C~Cp~g~~----G~~Ce~~~~~~C~~---------g~G~~YrG~~~~t~----sG~~Cq~ 63 (122)
T 2fd6_A 8 TCVSNKYFSNIHWCNCPKKFG----GQHCEIDKSKTCYE---------GNGHFYRGKASTDT----MGRPCLP 63 (122)
T ss_dssp EEEECTTTTTCEEEECCTTEE----STTSCEESSCCSBC---------SSCTTCCSCCCBBT----TSCBBCC
T ss_pred CcCCCcccCCCCCccCCCCCC----CccccccCcCCCcc---------cccccceeeccccc----cCCcccC
Confidence 577763 455 999999996 677863 22 3321 12235677776654 4566643
Done!