BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy17336
MLFSACCWYRDPHGLPWIEYLHSGASKI

High Scoring Gene Products

Symbol, full name Information P value
Jarid2
Jumonji, AT rich interactive domain 2 		protein from Drosophila melanogaster 1.8e-09

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy17336
        (28 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0036004 - symbol:Jarid2 "Jumonji, AT rich interact...   155  1.8e-09   1


>FB|FBgn0036004 [details] [associations]
            symbol:Jarid2 "Jumonji, AT rich interactive domain 2"
            species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
            evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005719
            "nuclear euchromatin" evidence=IDA] [GO:0035098 "ESC/E(Z) complex"
            evidence=IDA] [GO:0061085 "regulation of histone H3-K27
            methylation" evidence=IMP] [GO:0005700 "polytene chromosome"
            evidence=IDA] InterPro:IPR001606 InterPro:IPR003347
            InterPro:IPR017956 Pfam:PF01388 Pfam:PF02373 PROSITE:PS51011
            PROSITE:PS51184 SMART:SM00384 SMART:SM00558 EMBL:AE014296
            GO:GO:0003677 GO:GO:0035098 GO:GO:0005719 GO:GO:0005700
            Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:Q24573 InterPro:IPR003349
            PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0061085 CTD:3720
            KO:K11478 GeneTree:ENSGT00530000063118 FlyBase:FBgn0036004
            RefSeq:NP_648324.1 UniGene:Dm.29618 ProteinModelPortal:Q9VT00
            SMR:Q9VT00 MINT:MINT-1562739 STRING:Q9VT00
            EnsemblMetazoa:FBtr0076468 GeneID:39103 KEGG:dme:Dmel_CG3654
            UCSC:CG3654-RD InParanoid:Q9VT00 OMA:HESCEPA PhylomeDB:Q9VT00
            GenomeRNAi:39103 NextBio:811931 ArrayExpress:Q9VT00 Bgee:Q9VT00
            Uniprot:Q9VT00
        Length = 2351

 Score = 155 (59.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 25/28 (89%), Positives = 27/28 (96%)

Query:     1 MLFSACCWYRDPHGLPWIEYLHSGASKI 28
             MLFSACCWYRDPHGL WIEYLH+GASK+
Sbjct:  2070 MLFSACCWYRDPHGLSWIEYLHTGASKL 2097


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.329   0.143   0.566    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       28        28   0.00091  102 3  12 22  0.43    24
                                                     29  0.44    22


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  360 (38 KB)
  Total size of DFA:  60 KB (2059 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  3.24u 0.09s 3.33t   Elapsed:  00:00:01
  Total cpu time:  3.24u 0.09s 3.33t   Elapsed:  00:00:01
  Start:  Thu Aug 15 14:45:44 2013   End:  Thu Aug 15 14:45:45 2013

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