BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17338
(130 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q03347|RUNX1_MOUSE Runt-related transcription factor 1 OS=Mus musculus GN=Runx1 PE=1
SV=1
Length = 451
Score = 157 bits (397), Expect = 2e-38, Method: Composition-based stats.
Identities = 70/96 (72%), Positives = 82/96 (85%)
Query: 21 AERTLDSLLAEHPGELTRTGCPHVVCTVLPTHWRSNKTLPVAFKVVALGDVMDGTIVTIR 80
+R++ +LA+HPGEL RT P+ +C+VLPTHWR NKTLP+AFKVVALGDV DGT+VT+
Sbjct: 47 GDRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVM 106
Query: 81 AGNDENYCGELRNCTAVMKNQVAKFNDLRFVGRSGR 116
AGNDENY ELRN TA MKNQVA+FNDLRFVGRSGR
Sbjct: 107 AGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGR 142
>sp|Q63046|RUNX1_RAT Runt-related transcription factor 1 OS=Rattus norvegicus GN=Runx1
PE=2 SV=1
Length = 450
Score = 157 bits (396), Expect = 2e-38, Method: Composition-based stats.
Identities = 70/96 (72%), Positives = 82/96 (85%)
Query: 21 AERTLDSLLAEHPGELTRTGCPHVVCTVLPTHWRSNKTLPVAFKVVALGDVMDGTIVTIR 80
+R++ +LA+HPGEL RT P+ +C+VLPTHWR NKTLP+AFKVVALGDV DGT+VT+
Sbjct: 47 GDRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVM 106
Query: 81 AGNDENYCGELRNCTAVMKNQVAKFNDLRFVGRSGR 116
AGNDENY ELRN TA MKNQVA+FNDLRFVGRSGR
Sbjct: 107 AGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGR 142
>sp|Q01196|RUNX1_HUMAN Runt-related transcription factor 1 OS=Homo sapiens GN=RUNX1 PE=1
SV=3
Length = 453
Score = 157 bits (396), Expect = 2e-38, Method: Composition-based stats.
Identities = 70/96 (72%), Positives = 82/96 (85%)
Query: 21 AERTLDSLLAEHPGELTRTGCPHVVCTVLPTHWRSNKTLPVAFKVVALGDVMDGTIVTIR 80
+R++ +LA+HPGEL RT P+ +C+VLPTHWR NKTLP+AFKVVALGDV DGT+VT+
Sbjct: 47 GDRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVM 106
Query: 81 AGNDENYCGELRNCTAVMKNQVAKFNDLRFVGRSGR 116
AGNDENY ELRN TA MKNQVA+FNDLRFVGRSGR
Sbjct: 107 AGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGR 142
>sp|Q64131|RUNX3_MOUSE Runt-related transcription factor 3 OS=Mus musculus GN=Runx3 PE=2
SV=3
Length = 409
Score = 153 bits (386), Expect = 3e-37, Method: Composition-based stats.
Identities = 74/118 (62%), Positives = 89/118 (75%), Gaps = 9/118 (7%)
Query: 8 MNDNENFISAEVLAE---------RTLDSLLAEHPGELTRTGCPHVVCTVLPTHWRSNKT 58
M +N +SA+ A R++ +LA+H GEL RT P+ +C+VLP+HWR NKT
Sbjct: 30 MGENSGALSAQATAGPGGRTRPEVRSMVDVLADHAGELVRTDSPNFLCSVLPSHWRCNKT 89
Query: 59 LPVAFKVVALGDVMDGTIVTIRAGNDENYCGELRNCTAVMKNQVAKFNDLRFVGRSGR 116
LPVAFKVVALGDV DGT+VT+ AGNDENY ELRN +AVMKNQVA+FNDLRFVGRSGR
Sbjct: 90 LPVAFKVVALGDVPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGR 147
>sp|Q08775|RUNX2_MOUSE Runt-related transcription factor 2 OS=Mus musculus GN=Runx2 PE=1
SV=2
Length = 607
Score = 152 bits (384), Expect = 5e-37, Method: Composition-based stats.
Identities = 68/94 (72%), Positives = 81/94 (86%)
Query: 23 RTLDSLLAEHPGELTRTGCPHVVCTVLPTHWRSNKTLPVAFKVVALGDVMDGTIVTIRAG 82
RT+ ++A+HP EL RT P+ +C+VLP+HWR NKTLPVAFKVVALG+V DGT+VT+ AG
Sbjct: 186 RTMVEIIADHPAELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGEVPDGTVVTVMAG 245
Query: 83 NDENYCGELRNCTAVMKNQVAKFNDLRFVGRSGR 116
NDENY ELRN +AVMKNQVA+FNDLRFVGRSGR
Sbjct: 246 NDENYSAELRNASAVMKNQVARFNDLRFVGRSGR 279
>sp|Q13761|RUNX3_HUMAN Runt-related transcription factor 3 OS=Homo sapiens GN=RUNX3 PE=1
SV=2
Length = 415
Score = 152 bits (383), Expect = 8e-37, Method: Composition-based stats.
Identities = 69/94 (73%), Positives = 81/94 (86%)
Query: 23 RTLDSLLAEHPGELTRTGCPHVVCTVLPTHWRSNKTLPVAFKVVALGDVMDGTIVTIRAG 82
R++ +LA+H GEL RT P+ +C+VLP+HWR NKTLPVAFKVVALGDV DGT+VT+ AG
Sbjct: 53 RSMVDVLADHAGELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAG 112
Query: 83 NDENYCGELRNCTAVMKNQVAKFNDLRFVGRSGR 116
NDENY ELRN +AVMKNQVA+FNDLRFVGRSGR
Sbjct: 113 NDENYSAELRNASAVMKNQVARFNDLRFVGRSGR 146
>sp|Q13950|RUNX2_HUMAN Runt-related transcription factor 2 OS=Homo sapiens GN=RUNX2 PE=1
SV=2
Length = 521
Score = 151 bits (382), Expect = 9e-37, Method: Composition-based stats.
Identities = 68/94 (72%), Positives = 81/94 (86%)
Query: 23 RTLDSLLAEHPGELTRTGCPHVVCTVLPTHWRSNKTLPVAFKVVALGDVMDGTIVTIRAG 82
RT+ ++A+HP EL RT P+ +C+VLP+HWR NKTLPVAFKVVALG+V DGT+VT+ AG
Sbjct: 100 RTMVEIIADHPAELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGEVPDGTVVTVMAG 159
Query: 83 NDENYCGELRNCTAVMKNQVAKFNDLRFVGRSGR 116
NDENY ELRN +AVMKNQVA+FNDLRFVGRSGR
Sbjct: 160 NDENYSAELRNASAVMKNQVARFNDLRFVGRSGR 193
>sp|Q6PF39|RUNX1_XENLA Runt-related transcription factor 1 OS=Xenopus laevis GN=runx1 PE=2
SV=2
Length = 462
Score = 150 bits (378), Expect = 3e-36, Method: Composition-based stats.
Identities = 67/95 (70%), Positives = 81/95 (85%)
Query: 22 ERTLDSLLAEHPGELTRTGCPHVVCTVLPTHWRSNKTLPVAFKVVALGDVMDGTIVTIRA 81
+R + +L++HPGEL RT P+ +C+VLPTHWR NKTLP+AFKVVALG+V DGT+VT+ A
Sbjct: 48 DRNMVEVLSDHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGEVPDGTLVTVMA 107
Query: 82 GNDENYCGELRNCTAVMKNQVAKFNDLRFVGRSGR 116
GNDENY ELRN TA MK+QVA+FNDLRFVGRSGR
Sbjct: 108 GNDENYSAELRNATAAMKSQVARFNDLRFVGRSGR 142
>sp|P22814|RUNT_DROME Segmentation protein Runt OS=Drosophila melanogaster GN=run PE=2
SV=2
Length = 510
Score = 149 bits (375), Expect = 7e-36, Method: Composition-based stats.
Identities = 66/93 (70%), Positives = 78/93 (83%)
Query: 24 TLDSLLAEHPGELTRTGCPHVVCTVLPTHWRSNKTLPVAFKVVALGDVMDGTIVTIRAGN 83
+L +L E+ GEL +TG P ++C+ LP HWRSNK+LP AFKV+AL DV DGT+V+I+ GN
Sbjct: 106 SLHEMLQEYHGELAQTGSPSILCSALPNHWRSNKSLPGAFKVIALDDVPDGTLVSIKCGN 165
Query: 84 DENYCGELRNCTAVMKNQVAKFNDLRFVGRSGR 116
DENYCGELRNCT MKNQVAKFNDLRFVGRSGR
Sbjct: 166 DENYCGELRNCTTTMKNQVAKFNDLRFVGRSGR 198
>sp|Q9W349|LOZEN_DROME Protein lozenge OS=Drosophila melanogaster GN=lz PE=2 SV=2
Length = 826
Score = 145 bits (366), Expect = 7e-35, Method: Composition-based stats.
Identities = 68/95 (71%), Positives = 74/95 (77%)
Query: 22 ERTLDSLLAEHPGELTRTGCPHVVCTVLPTHWRSNKTLPVAFKVVALGDVMDGTIVTIRA 81
ER + EHPGEL RT P+ +C+ LP HWRSNKTLP+AFKVVAL +V DGT VTIRA
Sbjct: 273 ERLVQKRQQEHPGELVRTSNPYFLCSALPAHWRSNKTLPMAFKVVALAEVGDGTYVTIRA 332
Query: 82 GNDENYCGELRNCTAVMKNQVAKFNDLRFVGRSGR 116
GNDEN C ELRN T MKN VAKFNDLRFVGRSGR
Sbjct: 333 GNDENCCAELRNFTTQMKNDVAKFNDLRFVGRSGR 367
>sp|Q9Z2J9|RUNX2_RAT Runt-related transcription factor 2 (Fragments) OS=Rattus
norvegicus GN=Runx2 PE=2 SV=2
Length = 218
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/61 (83%), Positives = 56/61 (91%)
Query: 56 NKTLPVAFKVVALGDVMDGTIVTIRAGNDENYCGELRNCTAVMKNQVAKFNDLRFVGRSG 115
NKTLPVAFKVVALG+V DGT+VT+ AGNDENY ELRN +AVMKNQVA+FNDLRFVGRSG
Sbjct: 99 NKTLPVAFKVVALGEVPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSG 158
Query: 116 R 116
R
Sbjct: 159 R 159
>sp|Q25520|RUNT_MANSE Segmentation protein Runt (Fragment) OS=Manduca sexta GN=RUNT PE=2
SV=1
Length = 79
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/50 (86%), Positives = 45/50 (90%)
Query: 67 ALGDVMDGTIVTIRAGNDENYCGELRNCTAVMKNQVAKFNDLRFVGRSGR 116
AL DV DGT+VTI+AGNDEN ELRNCTAVMKNQVAKFNDLRFVGRSGR
Sbjct: 1 ALDDVQDGTLVTIKAGNDENVMAELRNCTAVMKNQVAKFNDLRFVGRSGR 50
>sp|Q3YR20|HSLV_EHRCJ ATP-dependent protease subunit HslV OS=Ehrlichia canis (strain
Jake) GN=hslV PE=3 SV=1
Length = 189
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 10/69 (14%)
Query: 17 AEVLAERTLDSLLAEHPGELTRTGCPHVVCTVLPTHWRSNKTLPVAFKVVALGDVMDGTI 76
A L ER L+S L +HPG+L R C L WR +K L ++ A+ V D +I
Sbjct: 64 AFTLFER-LESKLEKHPGQLLRA------CVELAKDWRMDKYLR---RLEAMMIVADKSI 113
Query: 77 VTIRAGNDE 85
I +GN +
Sbjct: 114 SLIISGNGD 122
>sp|Q2GFK0|HSLV_EHRCR ATP-dependent protease subunit HslV OS=Ehrlichia chaffeensis
(strain Arkansas) GN=hslV PE=3 SV=1
Length = 189
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 10/69 (14%)
Query: 17 AEVLAERTLDSLLAEHPGELTRTGCPHVVCTVLPTHWRSNKTLPVAFKVVALGDVMDGTI 76
A L ER L+S L +HPG+L R C L WR ++ L ++ A+ V D ++
Sbjct: 64 AFTLFER-LESKLEKHPGQLLRA------CVELAKDWRMDRYLR---RLEAMMIVADKSV 113
Query: 77 VTIRAGNDE 85
I +GN +
Sbjct: 114 SLIISGNGD 122
>sp|A9W0F2|HSLV_METEP ATP-dependent protease subunit HslV OS=Methylobacterium extorquens
(strain PA1) GN=hslV PE=3 SV=1
Length = 186
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 19/81 (23%)
Query: 20 LAERTLDSLLAEHPGELTRTGCPHVVCTVLPTHWRSNKTLP-------VAFKVVAL---- 68
L ER L++ L ++PG+LTR C L WR+++ L VA K V+L
Sbjct: 69 LFER-LEAKLEQYPGQLTRA------CVELTKDWRTDRYLRRLEAMMLVADKEVSLLLSG 121
Query: 69 -GDVMDGTIVTIRAGNDENYC 88
GDV++ + G+ NY
Sbjct: 122 AGDVLEPETGVMAIGSGGNYA 142
>sp|Q2VYI5|HSLV_MAGSA ATP-dependent protease subunit HslV OS=Magnetospirillum magneticum
(strain AMB-1 / ATCC 700264) GN=hslV PE=3 SV=1
Length = 182
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 7/51 (13%)
Query: 20 LAERTLDSLLAEHPGELTRTGCPHVVCTVLPTHWRSNKTLPVAFKVVALGD 70
L ER L++ L +HPG+LTR C L WR+++ L ++A+ D
Sbjct: 67 LLER-LEAKLEKHPGQLTRA------CVELAKDWRTDRYLRRLEAMMAVAD 110
>sp|Q2GEM5|HSLV_NEOSM ATP-dependent protease subunit HslV OS=Neorickettsia sennetsu
(strain Miyayama) GN=hslV PE=3 SV=1
Length = 188
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 7/43 (16%)
Query: 17 AEVLAERTLDSLLAEHPGELTRTGCPHVVCTVLPTHWRSNKTL 59
A L ER L+S L HPG+L R C L WR++K L
Sbjct: 61 AFTLFER-LESKLEAHPGQLLRA------CVELAKDWRTDKFL 96
>sp|B6JAL5|HSLV_OLICO ATP-dependent protease subunit HslV OS=Oligotropha carboxidovorans
(strain ATCC 49405 / DSM 1227 / OM5) GN=hslV PE=3 SV=1
Length = 183
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 19/81 (23%)
Query: 20 LAERTLDSLLAEHPGELTRTGCPHVVCTVLPTHWRSNKTLP-------VAFKVVAL---- 68
L ER L++ L ++PG+LTR C L WR+++ L VA K V+L
Sbjct: 67 LFER-LEAKLEQYPGQLTRA------CVELAKDWRTDRYLRRLEAMMIVADKEVSLVLTG 119
Query: 69 -GDVMDGTIVTIRAGNDENYC 88
GDV++ + G+ NY
Sbjct: 120 TGDVLEPEDGVMAIGSGGNYA 140
>sp|Q06135|GAS2_YEAST 1,3-beta-glucanosyltransferase GAS2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GAS2 PE=1 SV=1
Length = 555
Score = 29.3 bits (64), Expect = 7.9, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 18/93 (19%)
Query: 28 LLAEHPGELTRTGCPHVVCTVLPTHWRSNKTLPVA---FKVVALGDVMDGTIVTIRA--G 82
L A+ P E+ CPH+ V W +N+ LP K L +++ IV A G
Sbjct: 354 LTAKEPTEVESVECPHIAVGV----WEANEKLPETPDRSKCACLDEILPCEIVPFGAESG 409
Query: 83 NDENY----CGELRNCTAVMKN----QVAKFND 107
E Y C ++ +C+ ++ N + +F+D
Sbjct: 410 KYEEYFSYLCSKV-DCSDILANGKTGEYGEFSD 441
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,410,414
Number of Sequences: 539616
Number of extensions: 1800740
Number of successful extensions: 4111
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 4099
Number of HSP's gapped (non-prelim): 20
length of query: 130
length of database: 191,569,459
effective HSP length: 96
effective length of query: 34
effective length of database: 139,766,323
effective search space: 4752054982
effective search space used: 4752054982
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)