Query psy17338
Match_columns 130
No_of_seqs 86 out of 88
Neff 2.2
Searched_HMMs 29240
Date Fri Aug 16 19:43:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17338.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17338hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1eaq_A RUNT-related transcript 100.0 5.4E-71 1.8E-75 420.8 8.2 105 21-125 2-106 (140)
2 1pui_A ENGB, probable GTP-bind 67.5 1.4 4.9E-05 29.9 0.5 13 108-120 29-41 (210)
3 1znw_A Guanylate kinase, GMP k 66.5 1.5 5E-05 30.9 0.5 13 108-120 23-35 (207)
4 1z6g_A Guanylate kinase; struc 65.7 1.5 5.3E-05 31.6 0.5 13 108-120 26-38 (218)
5 3c8u_A Fructokinase; YP_612366 65.0 1.9 6.5E-05 30.4 0.8 13 108-120 25-37 (208)
6 4a74_A DNA repair and recombin 63.0 2 6.7E-05 29.5 0.5 15 108-122 28-42 (231)
7 3gfo_A Cobalt import ATP-bindi 61.9 3.2 0.00011 32.0 1.6 13 109-121 38-50 (275)
8 4f4c_A Multidrug resistance pr 61.5 2.4 8.3E-05 39.4 1.0 12 108-119 1108-1119(1321)
9 2pcj_A ABC transporter, lipopr 60.6 2.2 7.7E-05 31.3 0.5 12 109-120 34-45 (224)
10 3kta_A Chromosome segregation 60.4 2.3 8E-05 28.7 0.5 13 109-121 30-42 (182)
11 1mv5_A LMRA, multidrug resista 58.0 2.5 8.7E-05 31.3 0.4 13 108-120 31-43 (243)
12 3uie_A Adenylyl-sulfate kinase 57.1 2.7 9.3E-05 29.3 0.5 12 108-119 28-39 (200)
13 2ff7_A Alpha-hemolysin translo 56.9 2.7 9.3E-05 31.5 0.5 11 110-120 40-50 (247)
14 2ehv_A Hypothetical protein PH 56.6 2.8 9.6E-05 29.1 0.4 13 109-121 34-46 (251)
15 3tif_A Uncharacterized ABC tra 56.1 2.9 9.8E-05 31.1 0.5 13 108-120 34-46 (235)
16 2cbz_A Multidrug resistance-as 56.1 2.9 9.8E-05 31.1 0.5 12 109-120 35-46 (237)
17 3lxx_A GTPase IMAP family memb 55.0 3.1 0.00011 29.6 0.4 12 108-119 32-43 (239)
18 1tq4_A IIGP1, interferon-induc 53.8 3.4 0.00012 34.2 0.5 14 108-121 72-85 (413)
19 1u0l_A Probable GTPase ENGC; p 53.7 3.3 0.00011 31.6 0.5 13 108-120 172-184 (301)
20 2ixe_A Antigen peptide transpo 53.0 3.4 0.00012 31.5 0.5 12 109-120 49-60 (271)
21 1oix_A RAS-related protein RAB 52.8 3.7 0.00013 28.1 0.5 13 108-120 32-44 (191)
22 2d2e_A SUFC protein; ABC-ATPas 52.7 3.5 0.00012 30.8 0.5 12 109-120 33-44 (250)
23 2w0m_A SSO2452; RECA, SSPF, un 52.7 3.6 0.00012 27.9 0.5 13 109-121 27-39 (235)
24 2ghi_A Transport protein; mult 52.6 3.5 0.00012 31.1 0.5 11 110-120 51-61 (260)
25 2v9p_A Replication protein E1; 51.9 3.7 0.00013 32.6 0.5 13 108-120 129-141 (305)
26 2pze_A Cystic fibrosis transme 51.9 3.7 0.00013 30.3 0.4 11 109-119 38-48 (229)
27 3b85_A Phosphate starvation-in 51.7 4.8 0.00016 29.6 1.0 14 109-122 26-39 (208)
28 2onk_A Molybdate/tungstate ABC 51.7 3.7 0.00013 30.8 0.4 13 108-120 27-39 (240)
29 2cvh_A DNA repair and recombin 51.4 3.8 0.00013 27.9 0.5 12 109-120 24-35 (220)
30 1b0u_A Histidine permease; ABC 51.4 3.8 0.00013 31.0 0.4 12 109-120 36-47 (262)
31 2olj_A Amino acid ABC transpor 51.2 3.8 0.00013 31.3 0.4 11 110-120 55-65 (263)
32 1ji0_A ABC transporter; ATP bi 50.4 4 0.00014 30.3 0.5 12 109-120 36-47 (240)
33 1g6h_A High-affinity branched- 50.2 4.1 0.00014 30.6 0.5 12 109-120 37-48 (257)
34 3nh6_A ATP-binding cassette SU 49.8 2.4 8.3E-05 33.5 -0.9 13 108-120 83-95 (306)
35 2yz2_A Putative ABC transporte 49.8 4.2 0.00014 30.7 0.5 12 109-120 37-48 (266)
36 3lnc_A Guanylate kinase, GMP k 49.8 4.6 0.00016 28.6 0.7 14 108-121 30-43 (231)
37 2eyu_A Twitching motility prot 49.2 4.4 0.00015 30.7 0.5 15 108-122 28-42 (261)
38 4eun_A Thermoresistant glucoki 49.1 4.3 0.00015 28.2 0.4 13 108-120 32-44 (200)
39 1sgw_A Putative ABC transporte 48.8 4.4 0.00015 30.1 0.4 12 109-120 39-50 (214)
40 4g1u_C Hemin import ATP-bindin 48.6 4.4 0.00015 30.9 0.4 12 109-120 41-52 (266)
41 2yl4_A ATP-binding cassette SU 48.4 5.6 0.00019 33.2 1.1 12 109-120 374-385 (595)
42 2nq2_C Hypothetical ABC transp 48.2 4.6 0.00016 30.4 0.5 12 109-120 35-46 (253)
43 2yv5_A YJEQ protein; hydrolase 48.2 4.5 0.00016 31.0 0.5 37 76-121 145-181 (302)
44 2qag_B Septin-6, protein NEDD5 48.1 5.2 0.00018 33.6 0.8 12 108-119 45-56 (427)
45 2kjq_A DNAA-related protein; s 47.7 6.2 0.00021 27.2 1.0 17 106-122 37-53 (149)
46 2zu0_C Probable ATP-dependent 47.5 4.7 0.00016 30.5 0.4 11 110-120 51-61 (267)
47 1n0w_A DNA repair protein RAD5 47.4 4.8 0.00017 27.8 0.4 13 109-121 28-40 (243)
48 1uf3_A Hypothetical protein TT 47.2 25 0.00085 23.7 4.0 40 76-115 65-115 (228)
49 1vpl_A ABC transporter, ATP-bi 47.2 4.8 0.00016 30.6 0.4 12 109-120 45-56 (256)
50 3lxw_A GTPase IMAP family memb 47.0 4.8 0.00016 29.5 0.4 12 109-120 25-36 (247)
51 2ihy_A ABC transporter, ATP-bi 46.9 4.9 0.00017 30.9 0.4 12 109-120 51-62 (279)
52 2qi9_C Vitamin B12 import ATP- 46.3 5.1 0.00017 30.3 0.4 13 108-120 29-41 (249)
53 2bbw_A Adenylate kinase 4, AK4 45.8 5.3 0.00018 28.7 0.4 13 108-120 30-42 (246)
54 1cr0_A DNA primase/helicase; R 45.6 5.5 0.00019 29.3 0.5 11 110-120 40-50 (296)
55 3qf4_B Uncharacterized ABC tra 45.6 6.5 0.00022 33.0 1.0 13 108-120 384-396 (598)
56 3con_A GTPase NRAS; structural 45.5 5.4 0.00019 26.4 0.5 12 108-119 24-35 (190)
57 2wsm_A Hydrogenase expression/ 45.2 5.7 0.00019 27.3 0.5 12 108-119 33-44 (221)
58 3ney_A 55 kDa erythrocyte memb 44.7 5.6 0.00019 29.7 0.4 12 108-119 22-33 (197)
59 1rz3_A Hypothetical protein rb 44.0 6.1 0.00021 27.7 0.5 14 108-121 25-38 (201)
60 1rj9_A FTSY, signal recognitio 43.9 5.8 0.0002 31.0 0.5 15 108-122 105-119 (304)
61 3b60_A Lipid A export ATP-bind 43.7 6 0.00021 33.0 0.5 13 108-120 372-384 (582)
62 1svi_A GTP-binding protein YSX 43.4 6.5 0.00022 26.0 0.6 12 108-119 26-37 (195)
63 2pjz_A Hypothetical protein ST 43.4 6 0.0002 30.2 0.4 12 109-120 34-45 (263)
64 2qt1_A Nicotinamide riboside k 43.4 6.4 0.00022 27.2 0.5 13 108-120 24-36 (207)
65 2bbs_A Cystic fibrosis transme 43.3 6.2 0.00021 30.6 0.5 12 109-120 68-79 (290)
66 1f6b_A SAR1; gtpases, N-termin 43.3 6.1 0.00021 27.1 0.5 12 108-119 28-39 (198)
67 2qag_C Septin-7; cell cycle, c 42.4 6.3 0.00021 32.5 0.4 11 109-119 35-45 (418)
68 1lw7_A Transcriptional regulat 42.4 4.9 0.00017 31.1 -0.2 13 108-120 173-185 (365)
69 1mky_A Probable GTP-binding pr 42.4 6.3 0.00022 31.5 0.5 12 108-119 183-194 (439)
70 3ihw_A Centg3; RAS, centaurin, 42.3 6.4 0.00022 26.7 0.4 12 108-119 23-34 (184)
71 2oil_A CATX-8, RAS-related pro 42.1 6.5 0.00022 26.2 0.4 12 108-119 28-39 (193)
72 3cbq_A GTP-binding protein REM 41.7 6.7 0.00023 27.0 0.5 12 108-119 26-37 (195)
73 3qf4_A ABC transporter, ATP-bi 41.6 6.6 0.00023 33.0 0.5 13 108-120 372-384 (587)
74 3b5x_A Lipid A export ATP-bind 41.2 6.7 0.00023 32.7 0.4 12 108-119 372-383 (582)
75 3tui_C Methionine import ATP-b 41.1 6.8 0.00023 32.2 0.4 11 110-120 59-69 (366)
76 1z06_A RAS-related protein RAB 40.8 7.1 0.00024 26.0 0.4 12 108-119 23-34 (189)
77 2ged_A SR-beta, signal recogni 40.8 7.1 0.00024 25.9 0.4 12 108-119 51-62 (193)
78 2vp4_A Deoxynucleoside kinase; 40.8 6.9 0.00024 28.1 0.4 13 108-120 23-35 (230)
79 4a82_A Cystic fibrosis transme 40.7 6.9 0.00024 32.7 0.5 14 108-121 370-383 (578)
80 3ec2_A DNA replication protein 40.6 6.7 0.00023 26.5 0.3 16 107-122 40-55 (180)
81 3vaa_A Shikimate kinase, SK; s 40.5 7.1 0.00024 27.1 0.4 13 108-120 28-40 (199)
82 1m2o_B GTP-binding protein SAR 40.5 7.5 0.00026 26.4 0.5 12 108-119 26-37 (190)
83 2jeo_A Uridine-cytidine kinase 40.4 7.2 0.00024 28.2 0.5 13 108-120 28-40 (245)
84 3jvv_A Twitching mobility prot 40.3 15 0.0005 29.4 2.3 59 63-123 81-141 (356)
85 1htw_A HI0065; nucleotide-bind 40.2 7.3 0.00025 27.5 0.5 13 108-120 36-48 (158)
86 3oes_A GTPase rhebl1; small GT 40.1 7.7 0.00026 26.3 0.5 12 108-119 27-38 (201)
87 2rcn_A Probable GTPase ENGC; Y 39.6 7.4 0.00025 31.7 0.4 13 108-120 218-230 (358)
88 1g29_1 MALK, maltose transport 39.4 7.5 0.00026 31.5 0.5 14 109-122 33-46 (372)
89 3pqc_A Probable GTP-binding pr 39.3 8.2 0.00028 25.2 0.6 12 108-119 26-37 (195)
90 4ag6_A VIRB4 ATPase, type IV s 39.1 5.6 0.00019 30.8 -0.3 16 108-123 38-53 (392)
91 2xtp_A GTPase IMAP family memb 39.1 8 0.00027 27.7 0.5 13 108-120 25-37 (260)
92 2yyz_A Sugar ABC transporter, 39.0 7.6 0.00026 31.4 0.5 14 109-122 33-46 (359)
93 3reg_A RHO-like small GTPase; 38.8 7.9 0.00027 25.9 0.5 12 108-119 26-37 (194)
94 2aka_B Dynamin-1; fusion prote 38.8 8.3 0.00028 27.8 0.6 12 108-119 29-40 (299)
95 1a9x_B Carbamoyl phosphate syn 38.5 5 0.00017 33.2 -0.7 25 48-72 86-113 (379)
96 4e22_A Cytidylate kinase; P-lo 38.4 8 0.00027 28.4 0.4 13 108-120 30-42 (252)
97 3aez_A Pantothenate kinase; tr 38.2 8 0.00027 30.2 0.4 13 109-121 94-106 (312)
98 3l0i_B RAS-related protein RAB 38.0 11 0.00037 25.5 1.0 13 108-120 36-48 (199)
99 1ko7_A HPR kinase/phosphatase; 37.9 8.5 0.00029 31.1 0.5 12 108-119 147-158 (314)
100 1z47_A CYSA, putative ABC-tran 37.9 8.1 0.00028 31.3 0.5 13 110-122 46-58 (355)
101 2it1_A 362AA long hypothetical 37.7 8.2 0.00028 31.3 0.4 14 109-122 33-46 (362)
102 1v43_A Sugar-binding transport 37.6 8.3 0.00028 31.4 0.4 14 109-122 41-54 (372)
103 1jbk_A CLPB protein; beta barr 37.5 8.5 0.00029 24.6 0.4 14 108-121 46-59 (195)
104 2dr3_A UPF0273 protein PH0284; 37.4 9 0.00031 26.4 0.5 13 109-121 27-39 (247)
105 2qm8_A GTPase/ATPase; G protei 37.3 8.3 0.00029 30.1 0.4 13 108-120 58-70 (337)
106 2gza_A Type IV secretion syste 37.2 8.9 0.0003 30.2 0.6 14 109-122 179-192 (361)
107 1e69_A Chromosome segregation 37.2 18 0.0006 27.5 2.2 16 108-123 27-42 (322)
108 2yc2_C IFT27, small RAB-relate 37.1 7.7 0.00026 25.7 0.2 13 108-120 23-35 (208)
109 3gd7_A Fusion complex of cysti 37.1 8.8 0.0003 31.4 0.5 14 109-122 51-64 (390)
110 2hf9_A Probable hydrogenase ni 37.1 9.1 0.00031 26.3 0.5 12 108-119 41-52 (226)
111 4gzl_A RAS-related C3 botulinu 37.0 9.2 0.00031 26.3 0.5 12 108-119 33-44 (204)
112 2il1_A RAB12; G-protein, GDP, 37.0 8.8 0.0003 25.9 0.5 12 108-119 29-40 (192)
113 3llu_A RAS-related GTP-binding 36.8 9.3 0.00032 25.9 0.5 12 108-119 23-34 (196)
114 2gco_A H9, RHO-related GTP-bin 36.6 18 0.0006 24.6 1.9 30 87-119 10-39 (201)
115 1p9r_A General secretion pathw 36.5 14 0.00048 30.3 1.7 74 49-123 102-185 (418)
116 1sq5_A Pantothenate kinase; P- 36.5 9.2 0.00032 29.1 0.5 14 108-121 83-96 (308)
117 2fv8_A H6, RHO-related GTP-bin 36.3 9.5 0.00033 26.0 0.5 12 108-119 28-39 (207)
118 2h57_A ADP-ribosylation factor 36.1 9.7 0.00033 25.3 0.5 12 108-119 24-35 (190)
119 3szr_A Interferon-induced GTP- 36.1 7.8 0.00027 33.0 0.1 13 108-120 48-60 (608)
120 3b9q_A Chloroplast SRP recepto 35.8 9.1 0.00031 29.7 0.4 14 109-122 104-117 (302)
121 3c5c_A RAS-like protein 12; GD 35.5 9.6 0.00033 25.7 0.4 12 108-119 24-35 (187)
122 2a5j_A RAS-related protein RAB 35.4 9.5 0.00032 25.5 0.4 12 108-119 24-35 (191)
123 3cph_A RAS-related protein SEC 35.3 9.7 0.00033 25.5 0.5 12 108-119 23-34 (213)
124 3fvq_A Fe(3+) IONS import ATP- 35.1 10 0.00034 31.0 0.5 14 109-122 34-47 (359)
125 2pt7_A CAG-ALFA; ATPase, prote 35.0 10 0.00034 29.7 0.5 15 108-122 174-188 (330)
126 4dcu_A GTP-binding protein ENG 34.9 9.9 0.00034 30.5 0.5 12 108-119 26-37 (456)
127 3dz8_A RAS-related protein RAB 34.9 10 0.00036 25.3 0.5 12 108-119 26-37 (191)
128 2x77_A ADP-ribosylation factor 34.7 10 0.00035 25.1 0.5 12 108-119 25-36 (189)
129 3pic_A CIP2; alpha/beta hydrol 34.7 6.5 0.00022 33.0 -0.6 20 46-65 11-32 (375)
130 2q3h_A RAS homolog gene family 34.5 10 0.00035 25.4 0.5 12 108-119 23-34 (201)
131 2h17_A ADP-ribosylation factor 34.3 10 0.00035 25.1 0.5 12 108-119 24-35 (181)
132 2ewv_A Twitching motility prot 34.2 10 0.00035 30.1 0.5 59 62-122 93-153 (372)
133 2ew1_A RAS-related protein RAB 34.1 11 0.00037 26.3 0.5 12 108-119 29-40 (201)
134 1f2t_A RAD50 ABC-ATPase; DNA d 34.1 10 0.00036 26.0 0.4 14 109-122 27-40 (149)
135 3ux8_A Excinuclease ABC, A sub 34.1 10 0.00035 32.1 0.5 15 109-123 352-366 (670)
136 1nlf_A Regulatory protein REPA 33.8 11 0.00037 27.6 0.5 12 110-121 35-46 (279)
137 4aby_A DNA repair protein RECN 33.6 4.4 0.00015 31.1 -1.7 14 109-122 64-77 (415)
138 3rlf_A Maltose/maltodextrin im 33.5 11 0.00036 31.1 0.4 14 109-122 33-46 (381)
139 2oap_1 GSPE-2, type II secreti 33.4 21 0.0007 30.1 2.2 86 27-122 182-277 (511)
140 1w1w_A Structural maintenance 33.3 11 0.00037 29.9 0.5 14 109-122 30-43 (430)
141 1ixz_A ATP-dependent metallopr 33.2 11 0.00037 26.9 0.4 15 108-122 52-66 (254)
142 2j1l_A RHO-related GTP-binding 33.1 12 0.0004 25.9 0.5 12 108-119 37-48 (214)
143 2o52_A RAS-related protein RAB 32.9 12 0.0004 25.5 0.5 12 108-119 28-39 (200)
144 2atv_A RERG, RAS-like estrogen 32.9 11 0.00039 25.2 0.4 12 108-119 31-42 (196)
145 2fg5_A RAB-22B, RAS-related pr 32.6 12 0.00041 25.1 0.5 12 108-119 26-37 (192)
146 3d31_A Sulfate/molybdate ABC t 32.6 6.8 0.00023 31.5 -0.8 14 109-122 30-43 (348)
147 3th5_A RAS-related C3 botulinu 38.6 9.5 0.00032 25.8 0.0 31 90-120 13-45 (204)
148 1h65_A Chloroplast outer envel 32.3 12 0.00041 27.4 0.5 12 108-119 42-53 (270)
149 1t9h_A YLOQ, probable GTPase E 32.3 4.8 0.00017 31.9 -1.7 13 108-120 176-188 (307)
150 1gwn_A RHO-related GTP-binding 32.0 14 0.00048 25.7 0.9 13 107-119 30-42 (205)
151 3e70_C DPA, signal recognition 31.1 12 0.00042 29.6 0.4 14 109-122 133-146 (328)
152 3g5u_A MCG1178, multidrug resi 31.0 12 0.00042 34.7 0.5 13 108-120 419-431 (1284)
153 4f4c_A Multidrug resistance pr 31.0 13 0.00043 34.7 0.6 11 109-119 448-458 (1321)
154 1jwy_B Dynamin A GTPase domain 30.4 14 0.00047 27.0 0.6 12 108-119 27-38 (315)
155 2npi_A Protein CLP1; CLP1-PCF1 30.3 13 0.00045 30.8 0.5 46 73-119 94-152 (460)
156 3t34_A Dynamin-related protein 30.1 13 0.00045 28.5 0.5 13 107-119 36-48 (360)
157 2zts_A Putative uncharacterize 29.9 13 0.00046 25.5 0.4 10 110-119 35-44 (251)
158 2f7s_A C25KG, RAS-related prot 29.7 13 0.00046 25.2 0.4 12 108-119 28-39 (217)
159 3rl5_A Metallophosphoesterase 29.6 1.2E+02 0.0039 24.1 5.9 55 58-112 76-178 (296)
160 1knx_A Probable HPR(Ser) kinas 29.5 14 0.00049 29.8 0.6 12 108-119 150-161 (312)
161 1zd9_A ADP-ribosylation factor 29.5 14 0.00048 24.7 0.5 12 108-119 25-36 (188)
162 2p5s_A RAS and EF-hand domain 29.1 14 0.00048 24.9 0.4 12 108-119 31-42 (199)
163 2b6h_A ADP-ribosylation factor 28.5 15 0.00053 24.8 0.5 12 108-119 32-43 (192)
164 2px0_A Flagellar biosynthesis 28.5 11 0.00038 29.1 -0.2 15 108-122 108-122 (296)
165 2p5t_B PEZT; postsegregational 28.2 14 0.00046 27.0 0.2 13 108-120 35-47 (253)
166 3ksp_A Calcium/calmodulin-depe 28.1 11 0.00036 26.6 -0.4 28 87-116 19-46 (129)
167 1oxx_K GLCV, glucose, ABC tran 28.1 7.1 0.00024 31.3 -1.4 13 110-122 36-48 (353)
168 1yqt_A RNAse L inhibitor; ATP- 28.0 15 0.0005 30.9 0.4 12 109-120 51-62 (538)
169 2p65_A Hypothetical protein PF 27.9 12 0.0004 24.2 -0.1 15 107-121 45-59 (187)
170 3def_A T7I23.11 protein; chlor 27.8 16 0.00054 26.7 0.5 12 108-119 39-50 (262)
171 2hup_A RAS-related protein RAB 27.7 16 0.00056 24.9 0.5 12 108-119 32-43 (201)
172 4dhe_A Probable GTP-binding pr 27.6 7.1 0.00024 26.6 -1.3 12 108-119 32-43 (223)
173 1iy2_A ATP-dependent metallopr 27.5 16 0.00053 26.7 0.4 15 108-122 76-90 (278)
174 1m7g_A Adenylylsulfate kinase; 27.3 16 0.00054 25.5 0.5 12 108-119 28-39 (211)
175 3nwj_A ATSK2; P loop, shikimat 27.2 16 0.00053 27.8 0.4 13 108-120 51-63 (250)
176 3euj_A Chromosome partition pr 27.0 16 0.00054 31.1 0.4 14 108-121 32-45 (483)
177 1puj_A YLQF, conserved hypothe 26.9 17 0.00057 27.8 0.5 12 108-119 123-134 (282)
178 2og2_A Putative signal recogni 26.8 16 0.00055 29.5 0.4 14 109-122 161-174 (359)
179 2www_A Methylmalonic aciduria 26.4 17 0.00057 28.5 0.4 13 108-120 77-89 (349)
180 3g5u_A MCG1178, multidrug resi 26.1 17 0.00058 33.8 0.5 12 108-119 1062-1073(1284)
181 3qks_A DNA double-strand break 26.0 17 0.00059 26.0 0.4 14 110-123 28-41 (203)
182 3tqc_A Pantothenate kinase; bi 25.8 17 0.00059 28.9 0.4 13 109-121 96-108 (321)
183 3q3j_B RHO-related GTP-binding 25.2 18 0.00063 25.1 0.5 30 85-119 12-41 (214)
184 2yh5_A DAPX protein, BAMC; lip 25.0 84 0.0029 22.1 3.9 46 57-102 71-117 (127)
185 2yvt_A Hypothetical protein AQ 25.0 1.2E+02 0.004 21.1 4.6 42 74-115 89-141 (260)
186 4f9p_D 103.2 anti-BTN3A1 antib 24.8 19 0.00066 29.1 0.6 20 109-129 197-216 (254)
187 2yhs_A FTSY, cell division pro 24.5 19 0.00064 31.2 0.4 14 109-122 297-310 (503)
188 1odf_A YGR205W, hypothetical 3 24.5 19 0.00065 27.7 0.4 13 108-120 34-46 (290)
189 3cnl_A YLQF, putative uncharac 23.9 21 0.00071 27.0 0.5 13 108-120 102-114 (262)
190 2g3y_A GTP-binding protein GEM 23.9 20 0.00068 25.8 0.4 12 108-119 40-51 (211)
191 1ytm_A Phosphoenolpyruvate car 23.8 16 0.00054 32.0 -0.1 17 108-125 238-254 (532)
192 1lv7_A FTSH; alpha/beta domain 23.7 20 0.00069 25.5 0.4 14 108-121 48-61 (257)
193 4g4g_A 4-O-methyl-glucuronoyl 23.5 22 0.00076 30.6 0.7 20 46-65 44-65 (433)
194 3j16_B RLI1P; ribosome recycli 23.5 20 0.00069 30.9 0.4 15 108-122 106-120 (608)
195 1sxj_E Activator 1 40 kDa subu 23.4 21 0.00071 26.4 0.5 19 104-122 35-53 (354)
196 2olr_A Phosphoenolpyruvate car 23.4 16 0.00056 32.2 -0.1 17 108-125 244-260 (540)
197 2x2e_A Dynamin-1; nitration, h 23.1 21 0.00073 27.4 0.5 12 108-119 34-45 (353)
198 1gvn_B Zeta; postsegregational 23.0 24 0.00083 26.7 0.8 12 108-119 36-47 (287)
199 3ozx_A RNAse L inhibitor; ATP 22.9 21 0.00072 30.1 0.4 12 110-121 30-41 (538)
200 1ii2_A Phosphoenolpyruvate car 22.9 18 0.00061 31.6 -0.0 17 108-125 216-232 (524)
201 2qag_A Septin-2, protein NEDD5 22.9 20 0.00067 28.2 0.2 13 108-120 40-52 (361)
202 2zou_A Spondin-1; beta-sandwic 22.8 57 0.0019 23.3 2.7 42 40-81 1-47 (149)
203 2hjg_A GTP-binding protein ENG 22.8 21 0.00073 28.3 0.5 12 108-119 178-189 (436)
204 2r62_A Cell division protease 22.8 17 0.0006 25.8 -0.1 14 108-121 47-60 (268)
205 3lda_A DNA repair protein RAD5 22.7 22 0.00076 29.0 0.5 12 109-120 182-193 (400)
206 3bk7_A ABC transporter ATP-bin 22.7 21 0.00073 30.6 0.4 14 108-121 120-133 (607)
207 2o5v_A DNA replication and rep 22.6 22 0.00074 28.6 0.4 15 108-122 29-43 (359)
208 1in4_A RUVB, holliday junction 22.3 22 0.00075 27.1 0.4 15 106-120 52-66 (334)
209 3llm_A ATP-dependent RNA helic 22.2 26 0.0009 24.9 0.8 15 106-120 77-91 (235)
210 2w58_A DNAI, primosome compone 21.9 23 0.0008 24.0 0.5 16 106-121 55-70 (202)
211 2x8a_A Nuclear valosin-contain 21.7 23 0.00077 26.6 0.4 15 108-122 47-61 (274)
212 4dix_A Plectin-related protein 21.6 27 0.00094 28.4 0.9 48 59-106 68-119 (230)
213 1hp9_A Kappa-hefutoxin 1; scor 21.5 12 0.00041 21.5 -0.9 11 80-90 10-20 (26)
214 2lc4_A PILP protein; type IV p 21.4 65 0.0022 22.9 2.7 19 64-83 42-60 (111)
215 1njg_A DNA polymerase III subu 21.4 24 0.00083 23.1 0.4 14 108-121 48-61 (250)
216 1j8m_F SRP54, signal recogniti 21.3 23 0.00077 27.4 0.3 14 109-122 102-115 (297)
217 2y4x_A PILP protein; biosynthe 21.0 61 0.0021 22.1 2.5 19 64-83 35-53 (93)
218 3bos_A Putative DNA replicatio 21.0 25 0.00086 23.7 0.5 17 105-121 52-68 (242)
219 2qby_A CDC6 homolog 1, cell di 21.0 26 0.00089 25.4 0.5 18 105-122 45-62 (386)
220 3h2y_A GTPase family protein; 21.0 26 0.00088 27.8 0.6 41 75-120 135-175 (368)
221 2f6r_A COA synthase, bifunctio 20.9 26 0.00087 26.3 0.5 13 108-120 78-90 (281)
222 3ec1_A YQEH GTPase; atnos1, at 20.7 25 0.00086 27.8 0.4 39 76-119 138-176 (369)
223 4f9l_D 20.1 anti-BTN3A1 antibo 20.6 16 0.00056 29.5 -0.6 19 109-128 61-79 (259)
224 2obl_A ESCN; ATPase, hydrolase 20.6 26 0.0009 27.8 0.5 14 109-122 75-88 (347)
225 3qkt_A DNA double-strand break 20.4 26 0.00088 26.9 0.4 14 110-123 28-41 (339)
226 1j6q_A Cytochrome C maturation 20.4 1.1E+02 0.0037 22.4 3.8 34 56-89 72-112 (136)
227 2vt8_A HPI31, PI31, proteasome 20.3 1.1E+02 0.0039 21.7 3.9 12 46-57 53-64 (153)
228 1zu4_A FTSY; GTPase, signal re 20.1 19 0.00065 28.2 -0.4 15 108-122 108-122 (320)
No 1
>1eaq_A RUNT-related transcription factor 1; transcription/DNA, acute myeloid leukemia, AML, RUNX1, RUNT domain, chloride binding, IG fold; HET: MSE; 1.25A {Mus musculus} SCOP: b.2.5.6 PDB: 1ean_A 1eao_A* 2j6w_A 1e50_A 1h9d_A* 1ljm_A 1cmo_A 1hjc_A* 1hjb_C* 1io4_C 1co1_A
Probab=100.00 E-value=5.4e-71 Score=420.84 Aligned_cols=105 Identities=67% Similarity=1.038 Sum_probs=100.9
Q ss_pred hhhHHHHHhhcCCCCccccCCCceEeecCCCccccCCCCCcceEEEEeeeCCCCeEEEEeecCCCccccccccceeeecc
Q psy17338 21 AERTLDSLLAEHPGELTRTGCPHVVCTVLPTHWRSNKTLPVAFKVVALGDVMDGTIVTIRAGNDENYCGELRNCTAVMKN 100 (130)
Q Consensus 21 ~er~l~~~l~~~~gelv~T~sP~~lCs~LP~HWRsNKtLP~~FkVvaLg~V~DGT~Vtv~AGNDEn~~aELRN~~avmkn 100 (130)
+||++.|+|+|||||||+||||+|+||+||+||||||+||++|||||||+|||||+|||+|||||||||||||++|+|||
T Consensus 2 ~er~~~e~l~~~~gelv~T~sP~~~cs~LP~HWRsNKtLP~~FkVvalg~V~DGT~Vtv~AGNDEn~~aelrN~~a~mkn 81 (140)
T 1eaq_A 2 GDRSMVEVLADHPGELVRTDSPNFLSSVLPTHWRSNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNATAAMKN 81 (140)
T ss_dssp ---CHHHHHHHSTTTCEECSSTTEEECCCCSEEETTCCCSSCCEEEESSCCCTTCEEEEEEEETTEEEECEESCEEEEET
T ss_pred cchhHHHHHhhCCCceEecCCCCEEEccCcchhccCCCCCCceEEEEecccCCCCEEEEEecCCcchhHHHHhHHHHHhh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeecceeeeeccCCCcceeeCCC
Q psy17338 101 QVAKFNDLRFVGRSGREAHNNKAPD 125 (130)
Q Consensus 101 qvA~FNDLRFVGRSGRGKsFtls~~ 125 (130)
||||||||||||||||||||+|+|.
T Consensus 82 qvA~FnDLRFvgRSGRGKsFtlTIt 106 (140)
T 1eaq_A 82 QVARFNDLRFVGRSGRGKSFTLTIT 106 (140)
T ss_dssp TEEECSSCEECSCCCTTCCBEEEEE
T ss_pred ccceeecccccccCCCCccEEEEEE
Confidence 9999999999999999999999864
No 2
>1pui_A ENGB, probable GTP-binding protein ENGB; structural genomics, nysgxrc T16, GTPase, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.37.1.8
Probab=67.47 E-value=1.4 Score=29.86 Aligned_cols=13 Identities=31% Similarity=0.542 Sum_probs=11.2
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=++|++|.|||=
T Consensus 29 v~lvG~~g~GKST 41 (210)
T 1pui_A 29 VAFAGRSNAGKSS 41 (210)
T ss_dssp EEEEECTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 5689999999984
No 3
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=66.48 E-value=1.5 Score=30.95 Aligned_cols=13 Identities=15% Similarity=0.164 Sum_probs=11.1
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=++|.||.|||=
T Consensus 23 ~~l~GpnGsGKST 35 (207)
T 1znw_A 23 VVLSGPSAVGKST 35 (207)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 5689999999983
No 4
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=65.71 E-value=1.5 Score=31.59 Aligned_cols=13 Identities=31% Similarity=0.345 Sum_probs=10.6
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=++|.||.|||=
T Consensus 26 ~~lvGpsGsGKST 38 (218)
T 1z6g_A 26 LVICGPSGVGKGT 38 (218)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 3479999999983
No 5
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP}
Probab=64.99 E-value=1.9 Score=30.39 Aligned_cols=13 Identities=15% Similarity=0.363 Sum_probs=10.6
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+-.+|.||.|||=
T Consensus 25 v~I~G~sGsGKST 37 (208)
T 3c8u_A 25 VALSGAPGSGKST 37 (208)
T ss_dssp EEEECCTTSCTHH
T ss_pred EEEECCCCCCHHH
Confidence 3478999999983
No 6
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A*
Probab=62.96 E-value=2 Score=29.50 Aligned_cols=15 Identities=13% Similarity=0.129 Sum_probs=11.6
Q ss_pred eeeeeccCCCcceee
Q psy17338 108 LRFVGRSGREAHNNK 122 (130)
Q Consensus 108 LRFVGRSGRGKsFtl 122 (130)
+=++|.||.|||-.+
T Consensus 28 ~~l~G~nGsGKSTll 42 (231)
T 4a74_A 28 TEVFGEFGSGKTQLA 42 (231)
T ss_dssp EEEEESTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 347899999998543
No 7
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=61.88 E-value=3.2 Score=32.04 Aligned_cols=13 Identities=15% Similarity=0.243 Sum_probs=10.5
Q ss_pred eeeeccCCCccee
Q psy17338 109 RFVGRSGREAHNN 121 (130)
Q Consensus 109 RFVGRSGRGKsFt 121 (130)
=.+|.||.|||=-
T Consensus 38 ~iiGpnGsGKSTL 50 (275)
T 3gfo_A 38 AILGGNGVGKSTL 50 (275)
T ss_dssp EEECCTTSSHHHH
T ss_pred EEECCCCCCHHHH
Confidence 3689999999843
No 8
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=61.49 E-value=2.4 Score=39.37 Aligned_cols=12 Identities=42% Similarity=0.548 Sum_probs=10.3
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=+|||||.|||
T Consensus 1108 vaIVG~SGsGKS 1119 (1321)
T 4f4c_A 1108 LALVGPSGCGKS 1119 (1321)
T ss_dssp EEEECSTTSSTT
T ss_pred EEEECCCCChHH
Confidence 347999999998
No 9
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=60.57 E-value=2.2 Score=31.34 Aligned_cols=12 Identities=25% Similarity=0.490 Sum_probs=10.0
Q ss_pred eeeeccCCCcce
Q psy17338 109 RFVGRSGREAHN 120 (130)
Q Consensus 109 RFVGRSGRGKsF 120 (130)
=.+|.||.|||=
T Consensus 34 ~iiG~nGsGKST 45 (224)
T 2pcj_A 34 SIIGASGSGKST 45 (224)
T ss_dssp EEEECTTSCHHH
T ss_pred EEECCCCCCHHH
Confidence 468999999983
No 10
>3kta_A Chromosome segregation protein SMC; structural maintenance of chromosomes, ABC ATPase, CFTR adenylate kinase, AP5A, transferase; HET: AP5; 1.63A {Pyrococcus furiosus} PDB: 1xex_A* 1xew_X*
Probab=60.37 E-value=2.3 Score=28.67 Aligned_cols=13 Identities=31% Similarity=0.429 Sum_probs=10.7
Q ss_pred eeeeccCCCccee
Q psy17338 109 RFVGRSGREAHNN 121 (130)
Q Consensus 109 RFVGRSGRGKsFt 121 (130)
=++|.||.|||=-
T Consensus 30 ~i~G~NGsGKStl 42 (182)
T 3kta_A 30 AIVGANGSGKSNI 42 (182)
T ss_dssp EEEECTTSSHHHH
T ss_pred EEECCCCCCHHHH
Confidence 4789999999843
No 11
>1mv5_A LMRA, multidrug resistance ABC transporter ATP-binding and permease protein; asymmetric dimer, tetramer, P-glycoprotein; HET: ATP ADP; 3.10A {Lactococcus lactis} SCOP: c.37.1.12
Probab=58.04 E-value=2.5 Score=31.32 Aligned_cols=13 Identities=31% Similarity=0.562 Sum_probs=10.5
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=.+|+||.|||=
T Consensus 31 ~~i~G~nGsGKST 43 (243)
T 1mv5_A 31 IAFAGPSGGGKST 43 (243)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 3468999999983
No 12
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A*
Probab=57.15 E-value=2.7 Score=29.28 Aligned_cols=12 Identities=25% Similarity=0.360 Sum_probs=10.5
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|-||.|||
T Consensus 28 i~l~G~sGsGKS 39 (200)
T 3uie_A 28 IWVTGLSGSGKS 39 (200)
T ss_dssp EEEECSTTSSHH
T ss_pred EEEECCCCCCHH
Confidence 457999999998
No 13
>2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} SCOP: c.37.1.12 PDB: 2ffb_A* 2fgk_A* 2ffa_A* 2fgj_A* 2pmk_A* 3b5j_A* 1mt0_A 1xef_A*
Probab=56.89 E-value=2.7 Score=31.50 Aligned_cols=11 Identities=45% Similarity=0.709 Sum_probs=9.7
Q ss_pred eeeccCCCcce
Q psy17338 110 FVGRSGREAHN 120 (130)
Q Consensus 110 FVGRSGRGKsF 120 (130)
.+|+||.|||=
T Consensus 40 i~G~nGsGKST 50 (247)
T 2ff7_A 40 IVGRSGSGKST 50 (247)
T ss_dssp EECSTTSSHHH
T ss_pred EECCCCCCHHH
Confidence 68999999984
No 14
>2ehv_A Hypothetical protein PH0186; KAIC, RECA ATPase, unknown function; HET: ADP; 2.07A {Pyrococcus horikoshii} PDB: 2zts_A*
Probab=56.60 E-value=2.8 Score=29.08 Aligned_cols=13 Identities=15% Similarity=0.238 Sum_probs=10.5
Q ss_pred eeeeccCCCccee
Q psy17338 109 RFVGRSGREAHNN 121 (130)
Q Consensus 109 RFVGRSGRGKsFt 121 (130)
=++|.||.|||-.
T Consensus 34 ~l~GpnGsGKSTL 46 (251)
T 2ehv_A 34 LLTGGTGTGKTTF 46 (251)
T ss_dssp EEECCTTSSHHHH
T ss_pred EEEeCCCCCHHHH
Confidence 3689999999843
No 15
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=56.12 E-value=2.9 Score=31.07 Aligned_cols=13 Identities=23% Similarity=0.452 Sum_probs=10.5
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=.+|.||.|||=
T Consensus 34 ~~iiG~nGsGKST 46 (235)
T 3tif_A 34 VSIMGPSGSGKST 46 (235)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCCcHHH
Confidence 3468999999983
No 16
>2cbz_A Multidrug resistance-associated protein 1; ABC proteins, MRP1/ABCC1, nucleotide-binding domain, ATP- binding, hydrolysis, transport; HET: ATP; 1.5A {Homo sapiens}
Probab=56.11 E-value=2.9 Score=31.11 Aligned_cols=12 Identities=25% Similarity=0.387 Sum_probs=9.9
Q ss_pred eeeeccCCCcce
Q psy17338 109 RFVGRSGREAHN 120 (130)
Q Consensus 109 RFVGRSGRGKsF 120 (130)
=.+|+||.|||=
T Consensus 35 ~i~G~nGsGKST 46 (237)
T 2cbz_A 35 AVVGQVGCGKSS 46 (237)
T ss_dssp EEECSTTSSHHH
T ss_pred EEECCCCCCHHH
Confidence 358999999983
No 17
>3lxx_A GTPase IMAP family member 4; structural genomics consortium, SGC, coiled coil, GTP- binding, nucleotide-binding, immune system; HET: GDP; 2.15A {Homo sapiens}
Probab=55.00 E-value=3.1 Score=29.61 Aligned_cols=12 Identities=25% Similarity=0.601 Sum_probs=10.4
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=+||++|.|||
T Consensus 32 i~lvG~~g~GKS 43 (239)
T 3lxx_A 32 IVLVGKTGAGKS 43 (239)
T ss_dssp EEEECCTTSSHH
T ss_pred EEEECCCCCCHH
Confidence 348999999998
No 18
>1tq4_A IIGP1, interferon-inducible GTPase; interferon gamma, dimer, immunology, signaling protein; HET: GDP; 1.95A {Mus musculus} SCOP: c.37.1.8 PDB: 1tqd_A* 1tq6_A* 1tpz_A* 1tq2_A*
Probab=53.78 E-value=3.4 Score=34.22 Aligned_cols=14 Identities=14% Similarity=0.302 Sum_probs=11.5
Q ss_pred eeeeeccCCCccee
Q psy17338 108 LRFVGRSGREAHNN 121 (130)
Q Consensus 108 LRFVGRSGRGKsFt 121 (130)
+=++||||.|||=.
T Consensus 72 valvG~nGaGKSTL 85 (413)
T 1tq4_A 72 VAVTGETGSGKSSF 85 (413)
T ss_dssp EEEEECTTSSHHHH
T ss_pred EEEECCCCCcHHHH
Confidence 45899999999843
No 19
>1u0l_A Probable GTPase ENGC; permutation, OB-fold, zinc-finger, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; HET: GDP; 2.80A {Thermotoga maritima} SCOP: b.40.4.5 c.37.1.8
Probab=53.70 E-value=3.3 Score=31.58 Aligned_cols=13 Identities=23% Similarity=0.261 Sum_probs=10.9
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+-++|.||.|||=
T Consensus 172 v~l~G~sG~GKST 184 (301)
T 1u0l_A 172 STMAGLSGVGKSS 184 (301)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCCcHHH
Confidence 3589999999984
No 20
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A*
Probab=53.01 E-value=3.4 Score=31.46 Aligned_cols=12 Identities=25% Similarity=0.470 Sum_probs=10.0
Q ss_pred eeeeccCCCcce
Q psy17338 109 RFVGRSGREAHN 120 (130)
Q Consensus 109 RFVGRSGRGKsF 120 (130)
=.+|+||.|||=
T Consensus 49 ~i~G~nGsGKST 60 (271)
T 2ixe_A 49 ALVGPNGSGKST 60 (271)
T ss_dssp EEECSTTSSHHH
T ss_pred EEECCCCCCHHH
Confidence 368999999983
No 21
>1oix_A RAS-related protein RAB-11A; small G protein, intracellular trafficking, GTP-binding, lipoprotein, prenylation, protein transport; HET: GDP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1oiw_A* 1oiv_A* 3rwo_B* 3rwm_B*
Probab=52.77 E-value=3.7 Score=28.08 Aligned_cols=13 Identities=31% Similarity=0.524 Sum_probs=10.9
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=++|.+|.|||=
T Consensus 32 v~lvG~~g~GKST 44 (191)
T 1oix_A 32 VVLIGDSGVGKSN 44 (191)
T ss_dssp EEEEECTTSSHHH
T ss_pred EEEECcCCCCHHH
Confidence 4589999999983
No 22
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A*
Probab=52.75 E-value=3.5 Score=30.78 Aligned_cols=12 Identities=17% Similarity=0.409 Sum_probs=10.0
Q ss_pred eeeeccCCCcce
Q psy17338 109 RFVGRSGREAHN 120 (130)
Q Consensus 109 RFVGRSGRGKsF 120 (130)
=.+|.||.|||=
T Consensus 33 ~l~G~nGsGKST 44 (250)
T 2d2e_A 33 ALMGPNGAGKST 44 (250)
T ss_dssp EEECSTTSSHHH
T ss_pred EEECCCCCCHHH
Confidence 368999999983
No 23
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2}
Probab=52.69 E-value=3.6 Score=27.93 Aligned_cols=13 Identities=15% Similarity=0.202 Sum_probs=10.6
Q ss_pred eeeeccCCCccee
Q psy17338 109 RFVGRSGREAHNN 121 (130)
Q Consensus 109 RFVGRSGRGKsFt 121 (130)
=++|++|.|||.-
T Consensus 27 ~i~G~~GsGKTtl 39 (235)
T 2w0m_A 27 ALTGEPGTGKTIF 39 (235)
T ss_dssp EEECSTTSSHHHH
T ss_pred EEEcCCCCCHHHH
Confidence 4689999999854
No 24
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str}
Probab=52.58 E-value=3.5 Score=31.12 Aligned_cols=11 Identities=27% Similarity=0.594 Sum_probs=9.6
Q ss_pred eeeccCCCcce
Q psy17338 110 FVGRSGREAHN 120 (130)
Q Consensus 110 FVGRSGRGKsF 120 (130)
.+|.||.|||=
T Consensus 51 i~G~nGsGKST 61 (260)
T 2ghi_A 51 LVGHTGSGKST 61 (260)
T ss_dssp EECSTTSSHHH
T ss_pred EECCCCCCHHH
Confidence 68999999983
No 25
>2v9p_A Replication protein E1; AAA+ molecular motor, DNA replication, DNA translocation, nucleotide-binding, DNA-binding; 3.00A {Bovine papillomavirus type 1} PDB: 2gxa_A*
Probab=51.93 E-value=3.7 Score=32.64 Aligned_cols=13 Identities=23% Similarity=0.417 Sum_probs=10.7
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=+||+||.|||=
T Consensus 129 vaIvGpsGsGKST 141 (305)
T 2v9p_A 129 LAFIGPPNTGKSM 141 (305)
T ss_dssp EEEECSSSSSHHH
T ss_pred EEEECCCCCcHHH
Confidence 4479999999983
No 26
>2pze_A Cystic fibrosis transmembrane conductance regulat; NBD, ABC transporter, CFTR, hydrolase; HET: ATP; 1.70A {Homo sapiens} PDB: 2pzg_A* 2pzf_A* 1ckx_A 1cky_A 1ckw_A 1ckz_A
Probab=51.90 E-value=3.7 Score=30.26 Aligned_cols=11 Identities=18% Similarity=0.365 Sum_probs=9.6
Q ss_pred eeeeccCCCcc
Q psy17338 109 RFVGRSGREAH 119 (130)
Q Consensus 109 RFVGRSGRGKs 119 (130)
=.+|.||.|||
T Consensus 38 ~i~G~nGsGKS 48 (229)
T 2pze_A 38 AVAGSTGAGKT 48 (229)
T ss_dssp EEECCTTSSHH
T ss_pred EEECCCCCCHH
Confidence 36899999998
No 27
>3b85_A Phosphate starvation-inducible protein; PHOH2, ATPase, PFAM: PF02562, ST genomics, PSI-2, protein structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032}
Probab=51.75 E-value=4.8 Score=29.57 Aligned_cols=14 Identities=14% Similarity=0.010 Sum_probs=11.1
Q ss_pred eeeeccCCCcceee
Q psy17338 109 RFVGRSGREAHNNK 122 (130)
Q Consensus 109 RFVGRSGRGKsFtl 122 (130)
=.+|.||.|||--|
T Consensus 26 ~liG~nGsGKSTLl 39 (208)
T 3b85_A 26 FGLGPAGSGKTYLA 39 (208)
T ss_dssp EEECCTTSSTTHHH
T ss_pred EEECCCCCCHHHHH
Confidence 36899999999543
No 28
>2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: c.37.1.12
Probab=51.75 E-value=3.7 Score=30.82 Aligned_cols=13 Identities=15% Similarity=0.255 Sum_probs=10.7
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=.+|.||.|||=
T Consensus 27 ~~liG~nGsGKST 39 (240)
T 2onk_A 27 CVLLGPTGAGKSV 39 (240)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 4578999999983
No 29
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=51.42 E-value=3.8 Score=27.90 Aligned_cols=12 Identities=8% Similarity=0.102 Sum_probs=9.9
Q ss_pred eeeeccCCCcce
Q psy17338 109 RFVGRSGREAHN 120 (130)
Q Consensus 109 RFVGRSGRGKsF 120 (130)
=++|+||.|||.
T Consensus 24 ~i~G~~GsGKTt 35 (220)
T 2cvh_A 24 QVYGPYASGKTT 35 (220)
T ss_dssp EEECSTTSSHHH
T ss_pred EEECCCCCCHHH
Confidence 368999999984
No 30
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=51.37 E-value=3.8 Score=30.99 Aligned_cols=12 Identities=25% Similarity=0.501 Sum_probs=9.9
Q ss_pred eeeeccCCCcce
Q psy17338 109 RFVGRSGREAHN 120 (130)
Q Consensus 109 RFVGRSGRGKsF 120 (130)
=.+|.||.|||=
T Consensus 36 ~liG~nGsGKST 47 (262)
T 1b0u_A 36 SIIGSSGSGKST 47 (262)
T ss_dssp EEECCTTSSHHH
T ss_pred EEECCCCCCHHH
Confidence 358999999983
No 31
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=51.25 E-value=3.8 Score=31.34 Aligned_cols=11 Identities=27% Similarity=0.504 Sum_probs=9.6
Q ss_pred eeeccCCCcce
Q psy17338 110 FVGRSGREAHN 120 (130)
Q Consensus 110 FVGRSGRGKsF 120 (130)
.+|.||.|||=
T Consensus 55 liG~NGsGKST 65 (263)
T 2olj_A 55 VIGPSGSGKST 65 (263)
T ss_dssp EECCTTSSHHH
T ss_pred EEcCCCCcHHH
Confidence 58999999984
No 32
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=50.40 E-value=4 Score=30.27 Aligned_cols=12 Identities=17% Similarity=0.468 Sum_probs=10.0
Q ss_pred eeeeccCCCcce
Q psy17338 109 RFVGRSGREAHN 120 (130)
Q Consensus 109 RFVGRSGRGKsF 120 (130)
=.+|.||.|||=
T Consensus 36 ~l~G~nGsGKST 47 (240)
T 1ji0_A 36 TLIGANGAGKTT 47 (240)
T ss_dssp EEECSTTSSHHH
T ss_pred EEECCCCCCHHH
Confidence 368999999983
No 33
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=50.23 E-value=4.1 Score=30.55 Aligned_cols=12 Identities=17% Similarity=0.390 Sum_probs=10.0
Q ss_pred eeeeccCCCcce
Q psy17338 109 RFVGRSGREAHN 120 (130)
Q Consensus 109 RFVGRSGRGKsF 120 (130)
=.+|.||.|||=
T Consensus 37 ~liG~nGsGKST 48 (257)
T 1g6h_A 37 LIIGPNGSGKST 48 (257)
T ss_dssp EEECSTTSSHHH
T ss_pred EEECCCCCCHHH
Confidence 368999999983
No 34
>3nh6_A ATP-binding cassette SUB-family B member 6, mitoc; ABC-transporter, ABCB6, nucleotide binding domain, heme BIOS transport protein; 2.00A {Homo sapiens} PDB: 3nh9_A* 3nha_A* 3nhb_A*
Probab=49.84 E-value=2.4 Score=33.46 Aligned_cols=13 Identities=38% Similarity=0.560 Sum_probs=10.7
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=+||+||.|||=
T Consensus 83 vaivG~sGsGKST 95 (306)
T 3nh6_A 83 LALVGPSGAGKST 95 (306)
T ss_dssp EEEESSSCHHHHH
T ss_pred EEEECCCCchHHH
Confidence 3479999999983
No 35
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=49.75 E-value=4.2 Score=30.74 Aligned_cols=12 Identities=17% Similarity=0.332 Sum_probs=10.0
Q ss_pred eeeeccCCCcce
Q psy17338 109 RFVGRSGREAHN 120 (130)
Q Consensus 109 RFVGRSGRGKsF 120 (130)
=.+|.||.|||=
T Consensus 37 ~liG~nGsGKST 48 (266)
T 2yz2_A 37 LVAGNTGSGKST 48 (266)
T ss_dssp EEECSTTSSHHH
T ss_pred EEECCCCCcHHH
Confidence 368999999984
No 36
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=49.75 E-value=4.6 Score=28.63 Aligned_cols=14 Identities=21% Similarity=0.143 Sum_probs=7.3
Q ss_pred eeeeeccCCCccee
Q psy17338 108 LRFVGRSGREAHNN 121 (130)
Q Consensus 108 LRFVGRSGRGKsFt 121 (130)
+=++|-||.|||=.
T Consensus 30 i~l~Gp~GsGKSTl 43 (231)
T 3lnc_A 30 LVLSSPSGCGKTTV 43 (231)
T ss_dssp EEEECSCC----CH
T ss_pred EEEECCCCCCHHHH
Confidence 34799999999843
No 37
>2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus}
Probab=49.21 E-value=4.4 Score=30.70 Aligned_cols=15 Identities=13% Similarity=0.264 Sum_probs=11.9
Q ss_pred eeeeeccCCCcceee
Q psy17338 108 LRFVGRSGREAHNNK 122 (130)
Q Consensus 108 LRFVGRSGRGKsFtl 122 (130)
+=++|.||.|||=.+
T Consensus 28 v~i~Gp~GsGKSTll 42 (261)
T 2eyu_A 28 ILVTGPTGSGKSTTI 42 (261)
T ss_dssp EEEECSTTCSHHHHH
T ss_pred EEEECCCCccHHHHH
Confidence 348999999998544
No 38
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP}
Probab=49.15 E-value=4.3 Score=28.24 Aligned_cols=13 Identities=23% Similarity=0.353 Sum_probs=10.5
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=++|.||.|||-
T Consensus 32 i~l~G~~GsGKST 44 (200)
T 4eun_A 32 VVVMGVSGSGKTT 44 (200)
T ss_dssp EEEECCTTSCHHH
T ss_pred EEEECCCCCCHHH
Confidence 4478999999983
No 39
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12
Probab=48.82 E-value=4.4 Score=30.07 Aligned_cols=12 Identities=25% Similarity=0.421 Sum_probs=10.0
Q ss_pred eeeeccCCCcce
Q psy17338 109 RFVGRSGREAHN 120 (130)
Q Consensus 109 RFVGRSGRGKsF 120 (130)
=.+|.||.|||=
T Consensus 39 ~iiG~NGsGKST 50 (214)
T 1sgw_A 39 NFHGPNGIGKTT 50 (214)
T ss_dssp EEECCTTSSHHH
T ss_pred EEECCCCCCHHH
Confidence 368999999984
No 40
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=48.57 E-value=4.4 Score=30.86 Aligned_cols=12 Identities=17% Similarity=0.423 Sum_probs=10.2
Q ss_pred eeeeccCCCcce
Q psy17338 109 RFVGRSGREAHN 120 (130)
Q Consensus 109 RFVGRSGRGKsF 120 (130)
-.+|.||.|||=
T Consensus 41 ~liG~nGsGKST 52 (266)
T 4g1u_C 41 AIIGPNGAGKST 52 (266)
T ss_dssp EEECCTTSCHHH
T ss_pred EEECCCCCcHHH
Confidence 468999999984
No 41
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=48.35 E-value=5.6 Score=33.23 Aligned_cols=12 Identities=33% Similarity=0.506 Sum_probs=10.2
Q ss_pred eeeeccCCCcce
Q psy17338 109 RFVGRSGREAHN 120 (130)
Q Consensus 109 RFVGRSGRGKsF 120 (130)
=.||+||.|||=
T Consensus 374 ~ivG~sGsGKST 385 (595)
T 2yl4_A 374 ALVGPSGSGKST 385 (595)
T ss_dssp EEECCTTSSSTH
T ss_pred EEECCCCCCHHH
Confidence 479999999983
No 42
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=48.25 E-value=4.6 Score=30.44 Aligned_cols=12 Identities=17% Similarity=0.385 Sum_probs=10.0
Q ss_pred eeeeccCCCcce
Q psy17338 109 RFVGRSGREAHN 120 (130)
Q Consensus 109 RFVGRSGRGKsF 120 (130)
-.+|.||.|||=
T Consensus 35 ~l~G~nGsGKST 46 (253)
T 2nq2_C 35 AVLGQNGCGKST 46 (253)
T ss_dssp EEECCSSSSHHH
T ss_pred EEECCCCCCHHH
Confidence 368999999983
No 43
>2yv5_A YJEQ protein; hydrolase, GTPase, permutation, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GDP; 1.90A {Aquifex aeolicus}
Probab=48.20 E-value=4.5 Score=31.00 Aligned_cols=37 Identities=19% Similarity=0.294 Sum_probs=22.7
Q ss_pred EEEEeecCCCccccccccceeeeccceeeecceeeeeccCCCccee
Q psy17338 76 IVTIRAGNDENYCGELRNCTAVMKNQVAKFNDLRFVGRSGREAHNN 121 (130)
Q Consensus 76 ~Vtv~AGNDEn~~aELRN~~avmknqvA~FNDLRFVGRSGRGKsFt 121 (130)
.+.++|-+.++ ..||+.. +++++ +-++|.||.|||=.
T Consensus 145 ~~~~SA~~g~g-i~~L~~~---l~G~i-----~~l~G~sG~GKSTL 181 (302)
T 2yv5_A 145 VLKVSAKTGEG-IDELVDY---LEGFI-----CILAGPSGVGKSSI 181 (302)
T ss_dssp EEECCTTTCTT-HHHHHHH---TTTCE-----EEEECSTTSSHHHH
T ss_pred EEEEECCCCCC-HHHHHhh---ccCcE-----EEEECCCCCCHHHH
Confidence 45567766665 3455433 23332 45899999999843
No 44
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=48.07 E-value=5.2 Score=33.57 Aligned_cols=12 Identities=25% Similarity=0.409 Sum_probs=10.5
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=+||+||.|||
T Consensus 45 vaLvG~nGaGKS 56 (427)
T 2qag_B 45 ILCVGETGLGKS 56 (427)
T ss_dssp EEEECSTTSSSH
T ss_pred EEEECCCCCCHH
Confidence 458999999998
No 45
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B}
Probab=47.71 E-value=6.2 Score=27.17 Aligned_cols=17 Identities=12% Similarity=0.053 Sum_probs=13.5
Q ss_pred cceeeeeccCCCcceee
Q psy17338 106 NDLRFVGRSGREAHNNK 122 (130)
Q Consensus 106 NDLRFVGRSGRGKsFtl 122 (130)
+-+=++|.+|.|||.-+
T Consensus 37 ~~~~l~G~~G~GKTtL~ 53 (149)
T 2kjq_A 37 QFIYVWGEEGAGKSHLL 53 (149)
T ss_dssp SEEEEESSSTTTTCHHH
T ss_pred CEEEEECCCCCCHHHHH
Confidence 44668999999998644
No 46
>2zu0_C Probable ATP-dependent transporter SUFC; iron-sulfur cluster, ABC-ATPase, ATP-binding, cytoplasm, nucleotide-binding; HET: MES; 2.20A {Escherichia coli} PDB: 2d3w_A
Probab=47.49 E-value=4.7 Score=30.53 Aligned_cols=11 Identities=18% Similarity=0.447 Sum_probs=9.5
Q ss_pred eeeccCCCcce
Q psy17338 110 FVGRSGREAHN 120 (130)
Q Consensus 110 FVGRSGRGKsF 120 (130)
.+|.||.|||=
T Consensus 51 l~G~NGsGKST 61 (267)
T 2zu0_C 51 IMGPNGSGKST 61 (267)
T ss_dssp EECCTTSSHHH
T ss_pred EECCCCCCHHH
Confidence 68999999983
No 47
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11
Probab=47.39 E-value=4.8 Score=27.84 Aligned_cols=13 Identities=8% Similarity=0.041 Sum_probs=10.7
Q ss_pred eeeeccCCCccee
Q psy17338 109 RFVGRSGREAHNN 121 (130)
Q Consensus 109 RFVGRSGRGKsFt 121 (130)
=++|+||.|||..
T Consensus 28 ~i~G~~GsGKTtl 40 (243)
T 1n0w_A 28 EMFGEFRTGKTQI 40 (243)
T ss_dssp EEECCTTSSHHHH
T ss_pred EEECCCCCcHHHH
Confidence 4789999999854
No 48
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=47.22 E-value=25 Score=23.74 Aligned_cols=40 Identities=13% Similarity=0.116 Sum_probs=26.0
Q ss_pred EEEEeecCCCcccc-ccccc---------eeeeccceeeec-ceeeeeccC
Q psy17338 76 IVTIRAGNDENYCG-ELRNC---------TAVMKNQVAKFN-DLRFVGRSG 115 (130)
Q Consensus 76 ~Vtv~AGNDEn~~a-ELRN~---------~avmknqvA~FN-DLRFVGRSG 115 (130)
.|.+-.||-|.+.. .++.. ...+.++...++ +++|+|-+|
T Consensus 65 pv~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~g~~~ 115 (228)
T 1uf3_A 65 PTAYVPGPQDAPIWEYLREAANVELVHPEMRNVHETFTFWRGPYLVAGVGG 115 (228)
T ss_dssp CEEEECCTTSCSHHHHHHHHHHHHHHCTTEEECBTSEEEETTTEEEEEECS
T ss_pred cEEEECCCCCchhHHHHHhhhhhhccCcceEEcccceEeeCCCcEEecCCC
Confidence 47778999887652 23222 234556666777 899998765
No 49
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=47.19 E-value=4.8 Score=30.56 Aligned_cols=12 Identities=17% Similarity=0.437 Sum_probs=9.9
Q ss_pred eeeeccCCCcce
Q psy17338 109 RFVGRSGREAHN 120 (130)
Q Consensus 109 RFVGRSGRGKsF 120 (130)
=.+|.||.|||=
T Consensus 45 ~l~G~NGsGKST 56 (256)
T 1vpl_A 45 GLIGPNGAGKTT 56 (256)
T ss_dssp EEECCTTSSHHH
T ss_pred EEECCCCCCHHH
Confidence 368999999983
No 50
>3lxw_A GTPase IMAP family member 1; immunity, structural genomics consortium, SGC, immune system; HET: GDP; 2.21A {Homo sapiens} PDB: 3v70_A*
Probab=46.96 E-value=4.8 Score=29.51 Aligned_cols=12 Identities=33% Similarity=0.559 Sum_probs=10.3
Q ss_pred eeeeccCCCcce
Q psy17338 109 RFVGRSGREAHN 120 (130)
Q Consensus 109 RFVGRSGRGKsF 120 (130)
=+||++|.|||=
T Consensus 25 ~lvG~~g~GKSS 36 (247)
T 3lxw_A 25 ILVGRTGAGKSA 36 (247)
T ss_dssp EEESSTTSSHHH
T ss_pred EEECCCCCcHHH
Confidence 489999999983
No 51
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=46.93 E-value=4.9 Score=30.91 Aligned_cols=12 Identities=17% Similarity=0.246 Sum_probs=10.1
Q ss_pred eeeeccCCCcce
Q psy17338 109 RFVGRSGREAHN 120 (130)
Q Consensus 109 RFVGRSGRGKsF 120 (130)
=.+|.||.|||=
T Consensus 51 ~liG~NGsGKST 62 (279)
T 2ihy_A 51 ILYGLNGAGKTT 62 (279)
T ss_dssp EEECCTTSSHHH
T ss_pred EEECCCCCcHHH
Confidence 368999999984
No 52
>2qi9_C Vitamin B12 import ATP-binding protein BTUD; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_C* 4dbl_C
Probab=46.26 E-value=5.1 Score=30.31 Aligned_cols=13 Identities=31% Similarity=0.557 Sum_probs=10.6
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=.+|.||.|||=
T Consensus 29 ~~liG~NGsGKST 41 (249)
T 2qi9_C 29 LHLVGPNGAGKST 41 (249)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCCcHHH
Confidence 3478999999983
No 53
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A
Probab=45.80 E-value=5.3 Score=28.71 Aligned_cols=13 Identities=15% Similarity=0.258 Sum_probs=11.0
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=++|.||.|||=
T Consensus 30 i~l~G~~GsGKST 42 (246)
T 2bbw_A 30 AVILGPPGSGKGT 42 (246)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 4578999999984
No 54
>1cr0_A DNA primase/helicase; RECA-type protein fold, transferase; HET: DNA; 2.30A {Enterobacteria phage T7} SCOP: c.37.1.11 PDB: 1cr1_A* 1cr2_A* 1cr4_A* 1e0j_A* 1e0k_A*
Probab=45.64 E-value=5.5 Score=29.31 Aligned_cols=11 Identities=18% Similarity=0.175 Sum_probs=9.1
Q ss_pred eeeccCCCcce
Q psy17338 110 FVGRSGREAHN 120 (130)
Q Consensus 110 FVGRSGRGKsF 120 (130)
++|+||.|||-
T Consensus 40 i~G~~G~GKTT 50 (296)
T 1cr0_A 40 VTSGSGMGKST 50 (296)
T ss_dssp EEESTTSSHHH
T ss_pred EEeCCCCCHHH
Confidence 57899999984
No 55
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=45.64 E-value=6.5 Score=33.04 Aligned_cols=13 Identities=23% Similarity=0.493 Sum_probs=10.7
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+-.||+||.|||=
T Consensus 384 ~~ivG~sGsGKST 396 (598)
T 3qf4_B 384 VALVGPTGSGKTT 396 (598)
T ss_dssp EEEECCTTSSTTH
T ss_pred EEEECCCCCcHHH
Confidence 4579999999983
No 56
>3con_A GTPase NRAS; structural genomics consortium, SGC, GDP, oncogene, disease mutation, golgi apparatus, GTP-binding, lipoprotein membrane, methylation; HET: GDP; 1.65A {Homo sapiens} PDB: 2pmx_A* 3gft_A* 4q21_A*
Probab=45.49 E-value=5.4 Score=26.39 Aligned_cols=12 Identities=33% Similarity=0.421 Sum_probs=10.7
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 24 i~vvG~~~~GKS 35 (190)
T 3con_A 24 LVVVGAGGVGKS 35 (190)
T ss_dssp EEEECSTTSSHH
T ss_pred EEEECcCCCCHH
Confidence 568999999997
No 57
>2wsm_A Hydrogenase expression/formation protein (HYPB); metal binding protein; 2.30A {Archaeoglobus fulgidus}
Probab=45.19 E-value=5.7 Score=27.27 Aligned_cols=12 Identities=17% Similarity=0.385 Sum_probs=10.8
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|++|.|||
T Consensus 33 i~i~G~~g~GKT 44 (221)
T 2wsm_A 33 VNIMGAIGSGKT 44 (221)
T ss_dssp EEEEECTTSCHH
T ss_pred EEEEcCCCCCHH
Confidence 568999999998
No 58
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=44.73 E-value=5.6 Score=29.71 Aligned_cols=12 Identities=33% Similarity=0.509 Sum_probs=10.5
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.||.||+
T Consensus 22 ivl~GPSGaGKs 33 (197)
T 3ney_A 22 LVLIGASGVGRS 33 (197)
T ss_dssp EEEECCTTSSHH
T ss_pred EEEECcCCCCHH
Confidence 558999999997
No 59
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=43.95 E-value=6.1 Score=27.67 Aligned_cols=14 Identities=21% Similarity=0.062 Sum_probs=11.2
Q ss_pred eeeeeccCCCccee
Q psy17338 108 LRFVGRSGREAHNN 121 (130)
Q Consensus 108 LRFVGRSGRGKsFt 121 (130)
+-++|.||.|||-.
T Consensus 25 i~i~G~~GsGKstl 38 (201)
T 1rz3_A 25 LGIDGLSRSGKTTL 38 (201)
T ss_dssp EEEEECTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 45789999999853
No 60
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D*
Probab=43.94 E-value=5.8 Score=30.95 Aligned_cols=15 Identities=20% Similarity=0.237 Sum_probs=11.8
Q ss_pred eeeeeccCCCcceee
Q psy17338 108 LRFVGRSGREAHNNK 122 (130)
Q Consensus 108 LRFVGRSGRGKsFtl 122 (130)
+=+||.||.|||=++
T Consensus 105 i~lvG~nGsGKTTll 119 (304)
T 1rj9_A 105 VLVVGVNGVGKTTTI 119 (304)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCCcHHHHH
Confidence 347999999998554
No 61
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=43.73 E-value=6 Score=32.96 Aligned_cols=13 Identities=38% Similarity=0.657 Sum_probs=10.7
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=.||+||.|||=
T Consensus 372 ~~ivG~sGsGKST 384 (582)
T 3b60_A 372 VALVGRSGSGKST 384 (582)
T ss_dssp EEEEECTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 4479999999983
No 62
>1svi_A GTP-binding protein YSXC; ENGB, GTPase, GDP, hydrolase; HET: GDP; 1.95A {Bacillus subtilis} SCOP: c.37.1.8 PDB: 1sul_A* 1svw_A*
Probab=43.44 E-value=6.5 Score=26.02 Aligned_cols=12 Identities=25% Similarity=0.412 Sum_probs=10.6
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 26 i~v~G~~~~GKS 37 (195)
T 1svi_A 26 IALAGRSNVGKS 37 (195)
T ss_dssp EEEEEBTTSSHH
T ss_pred EEEECCCCCCHH
Confidence 558999999997
No 63
>2pjz_A Hypothetical protein ST1066; ATP binding protein, structural genomics, NPPSFA; 1.90A {Sulfolobus tokodaii}
Probab=43.38 E-value=6 Score=30.24 Aligned_cols=12 Identities=17% Similarity=0.346 Sum_probs=10.1
Q ss_pred eeeeccCCCcce
Q psy17338 109 RFVGRSGREAHN 120 (130)
Q Consensus 109 RFVGRSGRGKsF 120 (130)
=.+|.||.|||=
T Consensus 34 ~i~G~NGsGKST 45 (263)
T 2pjz_A 34 IILGPNGSGKTT 45 (263)
T ss_dssp EEECCTTSSHHH
T ss_pred EEECCCCCCHHH
Confidence 468999999984
No 64
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=43.37 E-value=6.4 Score=27.23 Aligned_cols=13 Identities=8% Similarity=0.184 Sum_probs=10.4
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=.+|.||+|||-
T Consensus 24 i~i~G~~GsGKST 36 (207)
T 2qt1_A 24 IGISGVTNSGKTT 36 (207)
T ss_dssp EEEEESTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 3478999999983
No 65
>2bbs_A Cystic fibrosis transmembrane conductance regulator; ATP binding cassette, transport protein; HET: ATP; 2.05A {Homo sapiens} PDB: 2bbt_A* 1xmi_A* 1xmj_A* 2bbo_A* 3si7_A* 1r0w_A 1q3h_A 1r0x_A* 1r0y_A* 1r0z_A* 1r10_A* 1xf9_A* 1xfa_A*
Probab=43.34 E-value=6.2 Score=30.65 Aligned_cols=12 Identities=17% Similarity=0.360 Sum_probs=10.0
Q ss_pred eeeeccCCCcce
Q psy17338 109 RFVGRSGREAHN 120 (130)
Q Consensus 109 RFVGRSGRGKsF 120 (130)
=.+|.||.|||=
T Consensus 68 ~i~G~NGsGKST 79 (290)
T 2bbs_A 68 AVAGSTGAGKTS 79 (290)
T ss_dssp EEEESTTSSHHH
T ss_pred EEECCCCCcHHH
Confidence 368999999983
No 66
>1f6b_A SAR1; gtpases, N-terminal helix, Mg-containing complex, protein transport; HET: GDP; 1.70A {Cricetulus griseus} SCOP: c.37.1.8 PDB: 2fmx_A* 2fa9_A* 2gao_A*
Probab=43.26 E-value=6.1 Score=27.12 Aligned_cols=12 Identities=25% Similarity=0.390 Sum_probs=10.9
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|++|.|||
T Consensus 28 i~lvG~~~vGKS 39 (198)
T 1f6b_A 28 LVFLGLDNAGKT 39 (198)
T ss_dssp EEEEEETTSSHH
T ss_pred EEEECCCCCCHH
Confidence 569999999997
No 67
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=42.40 E-value=6.3 Score=32.51 Aligned_cols=11 Identities=36% Similarity=0.425 Sum_probs=10.3
Q ss_pred eeeeccCCCcc
Q psy17338 109 RFVGRSGREAH 119 (130)
Q Consensus 109 RFVGRSGRGKs 119 (130)
=+||+||.|||
T Consensus 35 ~lvG~sGaGKS 45 (418)
T 2qag_C 35 MVVGESGLGKS 45 (418)
T ss_dssp EEECCTTSSHH
T ss_pred EEECCCCCcHH
Confidence 68999999998
No 68
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=42.40 E-value=4.9 Score=31.08 Aligned_cols=13 Identities=8% Similarity=0.166 Sum_probs=11.0
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+-++|.||.|||=
T Consensus 173 ~~IvG~nGsGKST 185 (365)
T 1lw7_A 173 VAILGGESSGKSV 185 (365)
T ss_dssp EEEECCTTSHHHH
T ss_pred EEEECCCCCCHHH
Confidence 5679999999983
No 69
>1mky_A Probable GTP-binding protein ENGA; GTPase, DER, KH-domain, tandem G-domains, ligand binding protein; HET: GDP; 1.90A {Thermotoga maritima} SCOP: c.37.1.8 c.37.1.8 d.52.5.1
Probab=42.36 E-value=6.3 Score=31.45 Aligned_cols=12 Identities=25% Similarity=0.398 Sum_probs=10.4
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=+||+||.|||
T Consensus 183 vaivG~~gvGKS 194 (439)
T 1mky_A 183 VAIVGRPNVGKS 194 (439)
T ss_dssp EEEECSTTSSHH
T ss_pred EEEECCCCCCHH
Confidence 348999999998
No 70
>3ihw_A Centg3; RAS, centaurin, GTPase, structural genomics, structural genomics consortium, SGC, alternative splicing, ANK repeat, cytoplasm, GTP-binding; 1.92A {Homo sapiens} SCOP: c.37.1.0
Probab=42.34 E-value=6.4 Score=26.70 Aligned_cols=12 Identities=17% Similarity=0.246 Sum_probs=10.8
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 23 i~ivG~~~vGKS 34 (184)
T 3ihw_A 23 VGIVGNLSSGKS 34 (184)
T ss_dssp EEEECCTTSCHH
T ss_pred EEEECCCCCCHH
Confidence 568999999997
No 71
>2oil_A CATX-8, RAS-related protein RAB-25; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.30A {Homo sapiens}
Probab=42.06 E-value=6.5 Score=26.19 Aligned_cols=12 Identities=25% Similarity=0.479 Sum_probs=10.8
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 28 i~v~G~~~~GKS 39 (193)
T 2oil_A 28 VVLIGESGVGKT 39 (193)
T ss_dssp EEEESSTTSSHH
T ss_pred EEEECcCCCCHH
Confidence 568999999997
No 72
>3cbq_A GTP-binding protein REM 2; FLJ38964A, structural genomics consortium, SGC, GDP, membrane, nucleotide-binding, nucleotide binding protein; HET: GDP; 1.82A {Homo sapiens}
Probab=41.75 E-value=6.7 Score=26.96 Aligned_cols=12 Identities=33% Similarity=0.498 Sum_probs=10.6
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=+||.+|.|||
T Consensus 26 i~vvG~~~vGKS 37 (195)
T 3cbq_A 26 VMLVGESGVGKS 37 (195)
T ss_dssp EEEECSTTSSHH
T ss_pred EEEECCCCCCHH
Confidence 568999999997
No 73
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=41.65 E-value=6.6 Score=33.00 Aligned_cols=13 Identities=15% Similarity=0.440 Sum_probs=10.8
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=.||+||.|||=
T Consensus 372 ~~ivG~sGsGKST 384 (587)
T 3qf4_A 372 VAVLGETGSGKST 384 (587)
T ss_dssp EEEECSSSSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 3479999999984
No 74
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=41.19 E-value=6.7 Score=32.68 Aligned_cols=12 Identities=42% Similarity=0.697 Sum_probs=10.2
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=.||+||.|||
T Consensus 372 ~~ivG~sGsGKS 383 (582)
T 3b5x_A 372 VALVGRSGSGKS 383 (582)
T ss_pred EEEECCCCCCHH
Confidence 346899999998
No 75
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=41.07 E-value=6.8 Score=32.19 Aligned_cols=11 Identities=27% Similarity=0.501 Sum_probs=9.7
Q ss_pred eeeccCCCcce
Q psy17338 110 FVGRSGREAHN 120 (130)
Q Consensus 110 FVGRSGRGKsF 120 (130)
.+|.||.|||=
T Consensus 59 IiGpnGaGKST 69 (366)
T 3tui_C 59 VIGASGAGKST 69 (366)
T ss_dssp EECCTTSSHHH
T ss_pred EEcCCCchHHH
Confidence 68999999983
No 76
>1z06_A RAS-related protein RAB-33B; RAB GTPase, RAB33B GTPase, vesicular trafficking, protein transport; HET: GNP; 1.81A {Mus musculus} SCOP: c.37.1.8 PDB: 2g77_B*
Probab=40.85 E-value=7.1 Score=26.01 Aligned_cols=12 Identities=17% Similarity=0.252 Sum_probs=10.8
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 23 i~v~G~~~~GKS 34 (189)
T 1z06_A 23 IIVIGDSNVGKT 34 (189)
T ss_dssp EEEECCTTSSHH
T ss_pred EEEECCCCCCHH
Confidence 568999999997
No 77
>2ged_A SR-beta, signal recognition particle receptor beta subunit; protein transport, G protein, proline isomerization, circular permutation; 2.20A {Saccharomyces cerevisiae}
Probab=40.82 E-value=7.1 Score=25.89 Aligned_cols=12 Identities=8% Similarity=0.171 Sum_probs=10.5
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 51 i~vvG~~g~GKS 62 (193)
T 2ged_A 51 IIIAGPQNSGKT 62 (193)
T ss_dssp EEEECCTTSSHH
T ss_pred EEEECCCCCCHH
Confidence 458999999997
No 78
>2vp4_A Deoxynucleoside kinase; ATP-binding, DNA synthesis, phosphoprotein, feedback inhibition, deoxyribonucleoside kinase, salvage pathway; HET: DCP; 2.20A {Drosophila melanogaster} SCOP: c.37.1.1 PDB: 1j90_A* 2jj8_A* 2vp2_A* 1oe0_A* 2vp5_A* 2vp6_A* 2vp9_A* 2vpp_A* 2vqs_A* 2vp0_A* 1ot3_A* 2jcs_A* 1zm7_A* 1zmx_A*
Probab=40.79 E-value=6.9 Score=28.07 Aligned_cols=13 Identities=15% Similarity=0.238 Sum_probs=11.0
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+-|+|-+|.|||=
T Consensus 23 i~i~G~~GsGKST 35 (230)
T 2vp4_A 23 VLIEGNIGSGKTT 35 (230)
T ss_dssp EEEECSTTSCHHH
T ss_pred EEEECCCCCCHHH
Confidence 4689999999983
No 79
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=40.69 E-value=6.9 Score=32.66 Aligned_cols=14 Identities=36% Similarity=0.487 Sum_probs=11.2
Q ss_pred eeeeeccCCCccee
Q psy17338 108 LRFVGRSGREAHNN 121 (130)
Q Consensus 108 LRFVGRSGRGKsFt 121 (130)
+=.||.||.|||=-
T Consensus 370 ~~ivG~sGsGKSTl 383 (578)
T 4a82_A 370 VAFVGMSGGGKSTL 383 (578)
T ss_dssp EEEECSTTSSHHHH
T ss_pred EEEECCCCChHHHH
Confidence 34799999999843
No 80
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*
Probab=40.56 E-value=6.7 Score=26.50 Aligned_cols=16 Identities=31% Similarity=0.459 Sum_probs=12.9
Q ss_pred ceeeeeccCCCcceee
Q psy17338 107 DLRFVGRSGREAHNNK 122 (130)
Q Consensus 107 DLRFVGRSGRGKsFtl 122 (130)
-+=++|.+|.||+.-+
T Consensus 40 ~~~l~G~~G~GKTtL~ 55 (180)
T 3ec2_A 40 GLTFVGSPGVGKTHLA 55 (180)
T ss_dssp EEEECCSSSSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 3668999999998654
No 81
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=40.51 E-value=7.1 Score=27.11 Aligned_cols=13 Identities=15% Similarity=0.258 Sum_probs=11.0
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=++|-||.|||-
T Consensus 28 i~l~G~~GsGKsT 40 (199)
T 3vaa_A 28 IFLTGYMGAGKTT 40 (199)
T ss_dssp EEEECCTTSCHHH
T ss_pred EEEEcCCCCCHHH
Confidence 5689999999983
No 82
>1m2o_B GTP-binding protein SAR1, GTP binding protein; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 2qtv_B*
Probab=40.49 E-value=7.5 Score=26.39 Aligned_cols=12 Identities=25% Similarity=0.384 Sum_probs=10.7
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 26 i~~vG~~~vGKS 37 (190)
T 1m2o_B 26 LLFLGLDNAGKT 37 (190)
T ss_dssp EEEEESTTSSHH
T ss_pred EEEECCCCCCHH
Confidence 569999999997
No 83
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A*
Probab=40.42 E-value=7.2 Score=28.17 Aligned_cols=13 Identities=8% Similarity=0.192 Sum_probs=10.5
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=.+|.||+|||-
T Consensus 28 igI~G~~GsGKST 40 (245)
T 2jeo_A 28 IGVSGGTASGKST 40 (245)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 3468999999984
No 84
>3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A*
Probab=40.25 E-value=15 Score=29.43 Aligned_cols=59 Identities=20% Similarity=0.144 Sum_probs=32.2
Q ss_pred eEEEEeeeCCCCeEEEEeecCCCcccc-ccccceeeeccceeeec-ceeeeeccCCCcceeeC
Q psy17338 63 FKVVALGDVMDGTIVTIRAGNDENYCG-ELRNCTAVMKNQVAKFN-DLRFVGRSGREAHNNKA 123 (130)
Q Consensus 63 FkVvaLg~V~DGT~Vtv~AGNDEn~~a-ELRN~~avmknqvA~FN-DLRFVGRSGRGKsFtls 123 (130)
|+|-++. ..+|..|+++--+.+...- +|- ...++++-..+=. =+=++|.||.|||=+|.
T Consensus 81 ~Rv~~~~-~~~g~~~~iR~~~~~~~~l~~lg-~~~~l~~l~~~~~g~i~I~GptGSGKTTlL~ 141 (356)
T 3jvv_A 81 FRVNAFN-QNRGAGAVFRTIPSKVLTMEELG-MGEVFKRVSDVPRGLVLVTGPTGSGKSTTLA 141 (356)
T ss_dssp EEEEEEE-ETTEEEEEEEEECCSCCCTTTTT-CCHHHHHHHHCSSEEEEEECSTTSCHHHHHH
T ss_pred EEEEEEe-eCCCcEEEEEECCCCCCCHHHcC-ChHHHHHHHhCCCCEEEEECCCCCCHHHHHH
Confidence 6766664 5678888888765543221 221 1112222111111 24589999999986553
No 85
>1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A
Probab=40.22 E-value=7.3 Score=27.48 Aligned_cols=13 Identities=15% Similarity=0.232 Sum_probs=10.9
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+-++|.+|.|||-
T Consensus 36 v~L~G~nGaGKTT 48 (158)
T 1htw_A 36 VYLNGDLGAGKTT 48 (158)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 4589999999984
No 86
>3oes_A GTPase rhebl1; small GTPase, structural genomics, structural genomics conso SGC, hydrolase; HET: GNP; 2.30A {Homo sapiens}
Probab=40.13 E-value=7.7 Score=26.29 Aligned_cols=12 Identities=8% Similarity=0.050 Sum_probs=10.3
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|++|.|||
T Consensus 27 i~vvG~~~~GKS 38 (201)
T 3oes_A 27 VVILGYRCVGKT 38 (201)
T ss_dssp EEEEESTTSSHH
T ss_pred EEEECCCCcCHH
Confidence 457999999997
No 87
>2rcn_A Probable GTPase ENGC; YJEQ, circularly permuted, GTP-binding, hydrolase, nucleotide-binding; HET: GDP; 2.25A {Salmonella typhimurium} PDB: 2ykr_W 4a2i_V
Probab=39.58 E-value=7.4 Score=31.73 Aligned_cols=13 Identities=31% Similarity=0.437 Sum_probs=10.8
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=|+|.||.|||=
T Consensus 218 ~~lvG~sG~GKST 230 (358)
T 2rcn_A 218 SIFAGQSGVGKSS 230 (358)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCccHHH
Confidence 4589999999983
No 88
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A
Probab=39.38 E-value=7.5 Score=31.49 Aligned_cols=14 Identities=21% Similarity=0.266 Sum_probs=11.1
Q ss_pred eeeeccCCCcceee
Q psy17338 109 RFVGRSGREAHNNK 122 (130)
Q Consensus 109 RFVGRSGRGKsFtl 122 (130)
=.+|.||.|||=.|
T Consensus 33 ~llGpnGsGKSTLL 46 (372)
T 1g29_1 33 ILLGPSGCGKTTTL 46 (372)
T ss_dssp EEECSTTSSHHHHH
T ss_pred EEECCCCcHHHHHH
Confidence 46899999998543
No 89
>3pqc_A Probable GTP-binding protein ENGB; rossmann fold, GTPase, cell cycle, hydrolase; HET: GDP; 1.90A {Thermotoga maritima} PDB: 3pr1_A
Probab=39.35 E-value=8.2 Score=25.20 Aligned_cols=12 Identities=42% Similarity=0.614 Sum_probs=10.5
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 26 i~v~G~~~~GKS 37 (195)
T 3pqc_A 26 VAFVGRSNVGKS 37 (195)
T ss_dssp EEEEEBTTSSHH
T ss_pred EEEECCCCCCHH
Confidence 458999999997
No 90
>4ag6_A VIRB4 ATPase, type IV secretory pathway VIRB4 components-like P; hydrolase, type IV secretion, conjugation; 2.35A {Thermoanaerobacter pseudethanolicus} PDB: 4ag5_A
Probab=39.13 E-value=5.6 Score=30.80 Aligned_cols=16 Identities=6% Similarity=0.142 Sum_probs=12.9
Q ss_pred eeeeeccCCCcceeeC
Q psy17338 108 LRFVGRSGREAHNNKA 123 (130)
Q Consensus 108 LRFVGRSGRGKsFtls 123 (130)
.=.+|-||.|||+.+.
T Consensus 38 ~~i~G~~G~GKs~~~~ 53 (392)
T 4ag6_A 38 WTILAKPGAGKSFTAK 53 (392)
T ss_dssp EEEECCTTSSHHHHHH
T ss_pred eEEEcCCCCCHHHHHH
Confidence 4478999999998753
No 91
>2xtp_A GTPase IMAP family member 2; immune system, G protein; HET: MSE; 1.50A {Homo sapiens} PDB: 2xto_A* 2xtm_A* 2xtn_A* 3p1j_A
Probab=39.12 E-value=8 Score=27.70 Aligned_cols=13 Identities=23% Similarity=0.547 Sum_probs=11.2
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=++|++|.|||=
T Consensus 25 I~lvG~~g~GKSt 37 (260)
T 2xtp_A 25 IILVGKTGTGKSA 37 (260)
T ss_dssp EEEEECTTSCHHH
T ss_pred EEEECCCCCCHHH
Confidence 5689999999983
No 92
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima}
Probab=39.01 E-value=7.6 Score=31.44 Aligned_cols=14 Identities=21% Similarity=0.309 Sum_probs=11.0
Q ss_pred eeeeccCCCcceee
Q psy17338 109 RFVGRSGREAHNNK 122 (130)
Q Consensus 109 RFVGRSGRGKsFtl 122 (130)
=.+|.||.|||=.|
T Consensus 33 ~llGpnGsGKSTLL 46 (359)
T 2yyz_A 33 ALLGPSGCGKTTTL 46 (359)
T ss_dssp EEECSTTSSHHHHH
T ss_pred EEEcCCCchHHHHH
Confidence 36899999998543
No 93
>3reg_A RHO-like small GTPase; cytoskeleton, nucleotide-binding, GTP-binding, signaling Pro lipoprotein, prenylation; HET: GSP; 1.80A {Entamoeba histolytica} PDB: 3ref_B* 4dvg_A*
Probab=38.84 E-value=7.9 Score=25.87 Aligned_cols=12 Identities=17% Similarity=0.224 Sum_probs=10.5
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 26 i~~vG~~~~GKS 37 (194)
T 3reg_A 26 IVVVGDGAVGKT 37 (194)
T ss_dssp EEEECSTTSSHH
T ss_pred EEEECcCCCCHH
Confidence 558999999997
No 94
>2aka_B Dynamin-1; fusion protein, GTPase domain, myosin, contractIle protein; 1.90A {Rattus norvegicus} SCOP: c.37.1.8 PDB: 3l43_A*
Probab=38.77 E-value=8.3 Score=27.82 Aligned_cols=12 Identities=17% Similarity=0.277 Sum_probs=10.7
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=+||++|.|||
T Consensus 29 i~vvG~~~~GKS 40 (299)
T 2aka_B 29 IAVVGGQSAGKS 40 (299)
T ss_dssp EEEEEBTTSCHH
T ss_pred EEEEeCCCCCHH
Confidence 568999999998
No 95
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=38.47 E-value=5 Score=33.19 Aligned_cols=25 Identities=20% Similarity=0.527 Sum_probs=20.6
Q ss_pred cCCCccccCCCCCcce---EEEEeeeCC
Q psy17338 48 VLPTHWRSNKTLPVAF---KVVALGDVM 72 (130)
Q Consensus 48 ~LP~HWRsNKtLP~~F---kVvaLg~V~ 72 (130)
-.|+||||.+||..-+ +|+++..|-
T Consensus 86 ~~~s~~~~~~~l~~~l~~~~i~gi~giD 113 (379)
T 1a9x_B 86 LIASNFRNTEDLSSYLKRHNIVAIADID 113 (379)
T ss_dssp SCCCCTTCCSCHHHHHHHTTCEEEESSC
T ss_pred CCCCcccccCCHHHHHHHCCCccccCCC
Confidence 4699999999998766 688887664
No 96
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis}
Probab=38.37 E-value=8 Score=28.40 Aligned_cols=13 Identities=23% Similarity=0.299 Sum_probs=11.0
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=.+|.||.|||=
T Consensus 30 I~I~G~~GsGKST 42 (252)
T 4e22_A 30 ITVDGPSGAGKGT 42 (252)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 5589999999983
No 97
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A*
Probab=38.17 E-value=8 Score=30.19 Aligned_cols=13 Identities=8% Similarity=0.072 Sum_probs=10.4
Q ss_pred eeeeccCCCccee
Q psy17338 109 RFVGRSGREAHNN 121 (130)
Q Consensus 109 RFVGRSGRGKsFt 121 (130)
=.+|.||.|||=.
T Consensus 94 gI~G~sGsGKSTL 106 (312)
T 3aez_A 94 GVAGSVAVGKSTT 106 (312)
T ss_dssp EEECCTTSCHHHH
T ss_pred EEECCCCchHHHH
Confidence 3689999999843
No 98
>3l0i_B RAS-related protein RAB-1A; GEF-GDF-RAB complex, GTP-binding, guanine-nucleotide exchang GDI-displacement factor; 2.85A {Homo sapiens}
Probab=38.00 E-value=11 Score=25.49 Aligned_cols=13 Identities=31% Similarity=0.432 Sum_probs=11.0
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=++|.+|.|||=
T Consensus 36 i~vvG~~~~GKSs 48 (199)
T 3l0i_B 36 LLLIGDSGVGKSC 48 (199)
T ss_dssp EEEECCTTSCCTT
T ss_pred EEEECCCCCCHHH
Confidence 4589999999973
No 99
>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} SCOP: c.98.2.1 c.91.1.2
Probab=37.89 E-value=8.5 Score=31.11 Aligned_cols=12 Identities=25% Similarity=0.332 Sum_probs=10.8
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=|.|.||.|||
T Consensus 147 vl~~G~sG~GKS 158 (314)
T 1ko7_A 147 VLITGDSGIGKS 158 (314)
T ss_dssp EEEEESTTSSHH
T ss_pred EEEEeCCCCCHH
Confidence 568999999998
No 100
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius}
Probab=37.86 E-value=8.1 Score=31.29 Aligned_cols=13 Identities=23% Similarity=0.314 Sum_probs=10.6
Q ss_pred eeeccCCCcceee
Q psy17338 110 FVGRSGREAHNNK 122 (130)
Q Consensus 110 FVGRSGRGKsFtl 122 (130)
.+|.||.|||=.|
T Consensus 46 llGpnGsGKSTLL 58 (355)
T 1z47_A 46 LLGPSGSGKTTIL 58 (355)
T ss_dssp EECSTTSSHHHHH
T ss_pred EECCCCCcHHHHH
Confidence 6899999998544
No 101
>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii}
Probab=37.68 E-value=8.2 Score=31.28 Aligned_cols=14 Identities=21% Similarity=0.275 Sum_probs=11.1
Q ss_pred eeeeccCCCcceee
Q psy17338 109 RFVGRSGREAHNNK 122 (130)
Q Consensus 109 RFVGRSGRGKsFtl 122 (130)
=.+|.||.|||=.|
T Consensus 33 ~llGpnGsGKSTLL 46 (362)
T 2it1_A 33 ALLGPSGSGKSTLL 46 (362)
T ss_dssp EEECCTTSSHHHHH
T ss_pred EEECCCCchHHHHH
Confidence 46899999998543
No 102
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A*
Probab=37.60 E-value=8.3 Score=31.38 Aligned_cols=14 Identities=21% Similarity=0.275 Sum_probs=10.9
Q ss_pred eeeeccCCCcceee
Q psy17338 109 RFVGRSGREAHNNK 122 (130)
Q Consensus 109 RFVGRSGRGKsFtl 122 (130)
=.+|.||.|||=.|
T Consensus 41 ~llGpnGsGKSTLL 54 (372)
T 1v43_A 41 VLLGPSGCGKTTTL 54 (372)
T ss_dssp EEECCTTSSHHHHH
T ss_pred EEECCCCChHHHHH
Confidence 36899999998543
No 103
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20
Probab=37.54 E-value=8.5 Score=24.61 Aligned_cols=14 Identities=14% Similarity=0.197 Sum_probs=11.9
Q ss_pred eeeeeccCCCccee
Q psy17338 108 LRFVGRSGREAHNN 121 (130)
Q Consensus 108 LRFVGRSGRGKsFt 121 (130)
+=++|.+|.||+.-
T Consensus 46 ~ll~G~~G~GKT~l 59 (195)
T 1jbk_A 46 PVLIGEPGVGKTAI 59 (195)
T ss_dssp EEEECCTTSCHHHH
T ss_pred eEEECCCCCCHHHH
Confidence 66899999999864
No 104
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=37.39 E-value=9 Score=26.43 Aligned_cols=13 Identities=15% Similarity=0.100 Sum_probs=10.2
Q ss_pred eeeeccCCCccee
Q psy17338 109 RFVGRSGREAHNN 121 (130)
Q Consensus 109 RFVGRSGRGKsFt 121 (130)
=+.|++|.|||.-
T Consensus 27 ~i~G~~GsGKTtl 39 (247)
T 2dr3_A 27 LLSGGPGTGKTIF 39 (247)
T ss_dssp EEEECTTSSHHHH
T ss_pred EEECCCCCCHHHH
Confidence 3589999999853
No 105
>2qm8_A GTPase/ATPase; G protein, G3E, metallochaperone, chaperone; HET: MSE; 1.70A {Methylobacterium extorquens} SCOP: c.37.1.10 PDB: 2qm7_A*
Probab=37.34 E-value=8.3 Score=30.15 Aligned_cols=13 Identities=15% Similarity=0.271 Sum_probs=10.8
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+-++|++|.|||=
T Consensus 58 v~i~G~~GaGKST 70 (337)
T 2qm8_A 58 VGITGVPGVGKST 70 (337)
T ss_dssp EEEECCTTSCHHH
T ss_pred EEEECCCCCCHHH
Confidence 4489999999984
No 106
>2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis}
Probab=37.18 E-value=8.9 Score=30.19 Aligned_cols=14 Identities=14% Similarity=0.185 Sum_probs=11.0
Q ss_pred eeeeccCCCcceee
Q psy17338 109 RFVGRSGREAHNNK 122 (130)
Q Consensus 109 RFVGRSGRGKsFtl 122 (130)
=++|.||.|||=.+
T Consensus 179 ~ivG~sGsGKSTll 192 (361)
T 2gza_A 179 VVAGETGSGKTTLM 192 (361)
T ss_dssp EEEESSSSCHHHHH
T ss_pred EEECCCCCCHHHHH
Confidence 37899999998433
No 107
>1e69_A Chromosome segregation SMC protein; structural maintenance of chromosomes, coiled coil; 3.1A {Thermotoga maritima} SCOP: c.37.1.12
Probab=37.18 E-value=18 Score=27.55 Aligned_cols=16 Identities=25% Similarity=0.266 Sum_probs=12.3
Q ss_pred eeeeeccCCCcceeeC
Q psy17338 108 LRFVGRSGREAHNNKA 123 (130)
Q Consensus 108 LRFVGRSGRGKsFtls 123 (130)
.=++|.+|.|||=-|.
T Consensus 27 ~~i~G~NGsGKS~ll~ 42 (322)
T 1e69_A 27 TAIVGPNGSGKSNIID 42 (322)
T ss_dssp EEEECCTTTCSTHHHH
T ss_pred EEEECCCCCcHHHHHH
Confidence 3589999999985443
No 108
>2yc2_C IFT27, small RAB-related GTPase; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_C
Probab=37.14 E-value=7.7 Score=25.73 Aligned_cols=13 Identities=15% Similarity=0.207 Sum_probs=3.2
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=++|.+|.|||=
T Consensus 23 i~v~G~~~~GKss 35 (208)
T 2yc2_C 23 VAVVGEATVGKSA 35 (208)
T ss_dssp EEEC---------
T ss_pred EEEECCCCCCHHH
Confidence 6699999999984
No 109
>3gd7_A Fusion complex of cystic fibrosis transmembrane conductance regulator, residues 1193-1427...; CFTR, ABC transporter, nucleotide binding domain, NBD; HET: B44; 2.70A {Homo sapiens}
Probab=37.10 E-value=8.8 Score=31.41 Aligned_cols=14 Identities=21% Similarity=0.382 Sum_probs=11.0
Q ss_pred eeeeccCCCcceee
Q psy17338 109 RFVGRSGREAHNNK 122 (130)
Q Consensus 109 RFVGRSGRGKsFtl 122 (130)
=++|.||.|||=.|
T Consensus 51 ~llGpsGsGKSTLL 64 (390)
T 3gd7_A 51 GLLGRTGSGKSTLL 64 (390)
T ss_dssp EEEESTTSSHHHHH
T ss_pred EEECCCCChHHHHH
Confidence 46899999998443
No 110
>2hf9_A Probable hydrogenase nickel incorporation protein HYPB; alpha and beta protein; HET: GSP; 1.90A {Methanocaldococcus jannaschii} PDB: 2hf8_A*
Probab=37.08 E-value=9.1 Score=26.30 Aligned_cols=12 Identities=25% Similarity=0.540 Sum_probs=10.6
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 41 i~ivG~~gvGKT 52 (226)
T 2hf9_A 41 FDFMGAIGSGKT 52 (226)
T ss_dssp EEEEESTTSSHH
T ss_pred EEEEcCCCCCHH
Confidence 568999999997
No 111
>4gzl_A RAS-related C3 botulinum toxin substrate 1; rossmann fold, GTP binding, membrane, hydrolase; HET: GNP; 2.00A {Homo sapiens} PDB: 3th5_A* 4gzm_A*
Probab=37.01 E-value=9.2 Score=26.25 Aligned_cols=12 Identities=17% Similarity=0.105 Sum_probs=10.2
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|++|.|||
T Consensus 33 i~vvG~~~~GKS 44 (204)
T 4gzl_A 33 CVVVGDGAVGKT 44 (204)
T ss_dssp EEEEESTTSSHH
T ss_pred EEEECcCCCCHH
Confidence 347999999997
No 112
>2il1_A RAB12; G-protein, GDP, GTPase, predicted, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.10A {Homo sapiens}
Probab=37.00 E-value=8.8 Score=25.89 Aligned_cols=12 Identities=17% Similarity=0.357 Sum_probs=10.6
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 29 i~vvG~~~~GKS 40 (192)
T 2il1_A 29 VIIIGSRGVGKT 40 (192)
T ss_dssp EEEECSTTSSHH
T ss_pred EEEECCCCCCHH
Confidence 568999999997
No 113
>3llu_A RAS-related GTP-binding protein C; structural genomics consortium, SGC, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; HET: GNP; 1.40A {Homo sapiens} PDB: 2q3f_A*
Probab=36.78 E-value=9.3 Score=25.85 Aligned_cols=12 Identities=8% Similarity=0.163 Sum_probs=10.5
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 23 i~~vG~~~vGKT 34 (196)
T 3llu_A 23 ILLMGLRRSGKS 34 (196)
T ss_dssp EEEEESTTSSHH
T ss_pred EEEECCCCCCHH
Confidence 558999999997
No 114
>2gco_A H9, RHO-related GTP-binding protein RHOC; GTPase,signaling protein, signaling Pro; HET: GNP; 1.40A {Homo sapiens} PDB: 2gcn_A* 2gcp_A* 1z2c_A* 1x86_B 2rgn_C* 1lb1_B 1s1c_A* 3kz1_E* 3lxr_A* 3lwn_A* 3lw8_A* 1cxz_A* 1a2b_A* 1ow3_B* 1ftn_A* 1cc0_A* 3msx_A* 1xcg_B 3t06_B 1tx4_B* ...
Probab=36.62 E-value=18 Score=24.56 Aligned_cols=30 Identities=17% Similarity=0.016 Sum_probs=17.4
Q ss_pred cccccccceeeeccceeeecceeeeeccCCCcc
Q psy17338 87 YCGELRNCTAVMKNQVAKFNDLRFVGRSGREAH 119 (130)
Q Consensus 87 ~~aELRN~~avmknqvA~FNDLRFVGRSGRGKs 119 (130)
.+.+.++..--|++.- | -+=++|++|.|||
T Consensus 10 ~~~~~~~~~~~m~~~~--~-ki~vvG~~~~GKS 39 (201)
T 2gco_A 10 HSSGLVPRGSHMAAIR--K-KLVIVGDGACGKT 39 (201)
T ss_dssp CCTTCCC-----CCEE--E-EEEEEESTTSSHH
T ss_pred ccCCcccCCCCCcccc--e-EEEEECCCCCCHH
Confidence 3456667777777643 2 2568999999998
No 115
>1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} SCOP: c.37.1.11 PDB: 1p9w_A*
Probab=36.55 E-value=14 Score=30.35 Aligned_cols=74 Identities=14% Similarity=0.180 Sum_probs=39.4
Q ss_pred CCCccccCCCCC---cceEEEEeeeCCCCeEEEEeecCCCcccccccccee------eeccceeeecc-eeeeeccCCCc
Q psy17338 49 LPTHWRSNKTLP---VAFKVVALGDVMDGTIVTIRAGNDENYCGELRNCTA------VMKNQVAKFND-LRFVGRSGREA 118 (130)
Q Consensus 49 LP~HWRsNKtLP---~~FkVvaLg~V~DGT~Vtv~AGNDEn~~aELRN~~a------vmknqvA~FND-LRFVGRSGRGK 118 (130)
+|+..|-+-.++ ..|+|-.+ +..+|..++++-=+.....-+|.|-.- ++++-+.+=.. +=++|.+|.||
T Consensus 102 ~~q~g~~~~~~~~~~~~~Rvs~~-~~~~g~~~viR~~~~~~~~~~l~~Lg~~~~~~~~L~~l~~~~ggii~I~GpnGSGK 180 (418)
T 1p9r_A 102 VPQDGRISLRIGGRAVDVRVSTM-PSSHGERVVMRLLDKNATRLDLHSLGMTAHNHDNFRRLIKRPHGIILVTGPTGSGK 180 (418)
T ss_dssp SCEEEEEEC-----CEEEEEEEE-CCTTSCEEEECCEETTTTCCCGGGSCCCHHHHHHHHHHHTSSSEEEEEECSTTSCH
T ss_pred CCCCceEEEEECCceEEEEEEEe-ecCCCcEEEEEecccccCCCCHHHcCCCHHHHHHHHHHHHhcCCeEEEECCCCCCH
Confidence 555555555553 34776655 466888888876554433344444321 22221111011 34789999999
Q ss_pred ceeeC
Q psy17338 119 HNNKA 123 (130)
Q Consensus 119 sFtls 123 (130)
|=+|.
T Consensus 181 TTlL~ 185 (418)
T 1p9r_A 181 STTLY 185 (418)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 96553
No 116
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A*
Probab=36.54 E-value=9.2 Score=29.09 Aligned_cols=14 Identities=7% Similarity=0.173 Sum_probs=11.1
Q ss_pred eeeeeccCCCccee
Q psy17338 108 LRFVGRSGREAHNN 121 (130)
Q Consensus 108 LRFVGRSGRGKsFt 121 (130)
+=.+|.||.|||-.
T Consensus 83 igI~G~~GsGKSTl 96 (308)
T 1sq5_A 83 ISIAGSVAVGKSTT 96 (308)
T ss_dssp EEEEECTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 45789999999843
No 117
>2fv8_A H6, RHO-related GTP-binding protein RHOB; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=36.34 E-value=9.5 Score=26.03 Aligned_cols=12 Identities=25% Similarity=0.252 Sum_probs=10.7
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 28 i~vvG~~~~GKS 39 (207)
T 2fv8_A 28 LVVVGDGACGKT 39 (207)
T ss_dssp EEEEECTTSSHH
T ss_pred EEEECcCCCCHH
Confidence 568999999997
No 118
>2h57_A ADP-ribosylation factor-like protein 6; GTP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GTP; 2.00A {Homo sapiens}
Probab=36.11 E-value=9.7 Score=25.34 Aligned_cols=12 Identities=8% Similarity=0.119 Sum_probs=10.4
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 24 i~v~G~~~~GKS 35 (190)
T 2h57_A 24 VLCLGLDNSGKT 35 (190)
T ss_dssp EEEEECTTSSHH
T ss_pred EEEECCCCCCHH
Confidence 458999999997
No 119
>3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B
Probab=36.09 E-value=7.8 Score=32.97 Aligned_cols=13 Identities=8% Similarity=0.299 Sum_probs=11.2
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+-+||.||+|||=
T Consensus 48 iaIvG~nGsGKST 60 (608)
T 3szr_A 48 IAVIGDQSSGKSS 60 (608)
T ss_dssp EECCCCTTSCHHH
T ss_pred EEEECCCCChHHH
Confidence 5689999999984
No 120
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana}
Probab=35.81 E-value=9.1 Score=29.71 Aligned_cols=14 Identities=21% Similarity=0.278 Sum_probs=11.5
Q ss_pred eeeeccCCCcceee
Q psy17338 109 RFVGRSGREAHNNK 122 (130)
Q Consensus 109 RFVGRSGRGKsFtl 122 (130)
=+||.||.|||=++
T Consensus 104 ~lvG~nGsGKTTll 117 (302)
T 3b9q_A 104 MIVGVNGGGKTTSL 117 (302)
T ss_dssp EEECCTTSCHHHHH
T ss_pred EEEcCCCCCHHHHH
Confidence 37999999998654
No 121
>3c5c_A RAS-like protein 12; GDP, GTPase, structural genomics consortium, SGC, limited proteolysis, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.85A {Homo sapiens}
Probab=35.51 E-value=9.6 Score=25.68 Aligned_cols=12 Identities=33% Similarity=0.609 Sum_probs=10.5
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 24 i~vvG~~~vGKT 35 (187)
T 3c5c_A 24 LAILGRRGAGKS 35 (187)
T ss_dssp EEEECCTTSSHH
T ss_pred EEEECCCCCcHH
Confidence 558999999997
No 122
>2a5j_A RAS-related protein RAB-2B; GTPase, signal transduction, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.50A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z0a_A*
Probab=35.44 E-value=9.5 Score=25.51 Aligned_cols=12 Identities=17% Similarity=0.354 Sum_probs=10.5
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 24 i~v~G~~~~GKS 35 (191)
T 2a5j_A 24 YIIIGDTGVGKS 35 (191)
T ss_dssp EEEESSTTSSHH
T ss_pred EEEECcCCCCHH
Confidence 458999999997
No 123
>3cph_A RAS-related protein SEC4; RAB GTPase, prenylation, vesicular transport, cytoplasm, cytoplasmic vesicle, exocytosis, GTP-binding; HET: GDP; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=35.34 E-value=9.7 Score=25.52 Aligned_cols=12 Identities=25% Similarity=0.484 Sum_probs=10.8
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 23 i~v~G~~~~GKS 34 (213)
T 3cph_A 23 ILLIGDSGVGKS 34 (213)
T ss_dssp EEEECSTTSSHH
T ss_pred EEEECCCCCCHH
Confidence 569999999997
No 124
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae}
Probab=35.05 E-value=10 Score=30.97 Aligned_cols=14 Identities=21% Similarity=0.178 Sum_probs=10.9
Q ss_pred eeeeccCCCcceee
Q psy17338 109 RFVGRSGREAHNNK 122 (130)
Q Consensus 109 RFVGRSGRGKsFtl 122 (130)
=++|.||.|||=.|
T Consensus 34 ~llGpsGsGKSTLL 47 (359)
T 3fvq_A 34 FIIGASGCGKTTLL 47 (359)
T ss_dssp EEEESTTSSHHHHH
T ss_pred EEECCCCchHHHHH
Confidence 46899999998443
No 125
>2pt7_A CAG-ALFA; ATPase, protein-protein complex, type IV secretion, hydrolas binding complex; 2.40A {Helicobacter pylori} SCOP: c.37.1.11 PDB: 1nly_A* 1nlz_A 1opx_A* 1g6o_A
Probab=34.99 E-value=10 Score=29.70 Aligned_cols=15 Identities=13% Similarity=0.191 Sum_probs=11.6
Q ss_pred eeeeeccCCCcceee
Q psy17338 108 LRFVGRSGREAHNNK 122 (130)
Q Consensus 108 LRFVGRSGRGKsFtl 122 (130)
+=++|.||.|||=.+
T Consensus 174 v~i~G~~GsGKTTll 188 (330)
T 2pt7_A 174 VIVCGGTGSGKTTYI 188 (330)
T ss_dssp EEEEESTTSCHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 347899999998443
No 126
>4dcu_A GTP-binding protein ENGA; GTPase, GDP, protein binding, hydrolase; HET: GDP; 2.00A {Bacillus subtilis} PDB: 4dct_A* 4dcs_A* 4dcv_A* 2hjg_A*
Probab=34.93 E-value=9.9 Score=30.48 Aligned_cols=12 Identities=25% Similarity=0.398 Sum_probs=10.4
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=+|||+|.|||
T Consensus 26 V~lvG~~nvGKS 37 (456)
T 4dcu_A 26 VAIVGRPNVGKS 37 (456)
T ss_dssp EEEECSSSSSHH
T ss_pred EEEECCCCCcHH
Confidence 447999999998
No 127
>3dz8_A RAS-related protein RAB-3B; GDP, GTPase, structural genomics consortium, SGC, cell GTP-binding, lipoprotein, membrane, methylation; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=34.91 E-value=10 Score=25.30 Aligned_cols=12 Identities=25% Similarity=0.332 Sum_probs=10.5
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 26 i~v~G~~~~GKS 37 (191)
T 3dz8_A 26 LLIIGNSSVGKT 37 (191)
T ss_dssp EEEEESTTSSHH
T ss_pred EEEECCCCcCHH
Confidence 458999999997
No 128
>2x77_A ADP-ribosylation factor; GTP-binding protein, small GTPase, nucleotide-binding; HET: GDP; 2.10A {Leishmania major}
Probab=34.68 E-value=10 Score=25.12 Aligned_cols=12 Identities=8% Similarity=0.174 Sum_probs=10.8
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 25 i~v~G~~~~GKs 36 (189)
T 2x77_A 25 VLMLGLDNAGKT 36 (189)
T ss_dssp EEEEEETTSSHH
T ss_pred EEEECCCCCCHH
Confidence 568999999998
No 129
>3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina}
Probab=34.66 E-value=6.5 Score=33.02 Aligned_cols=20 Identities=40% Similarity=0.662 Sum_probs=14.8
Q ss_pred eecCCCcc--ccCCCCCcceEE
Q psy17338 46 CTVLPTHW--RSNKTLPVAFKV 65 (130)
Q Consensus 46 Cs~LP~HW--RsNKtLP~~FkV 65 (130)
|..||+-. -+|.+||.+|+-
T Consensus 11 ~~~~p~~~~~~~~~~LPdpf~~ 32 (375)
T 3pic_A 11 CSALPGSITLRSNAKLNDLFTM 32 (375)
T ss_dssp ---CCSSCCCCCCSSCCCTTBC
T ss_pred CCCCCCCCCCcccCCCCCcccc
Confidence 88999887 789999999974
No 130
>2q3h_A RAS homolog gene family, member U; GTPase, structural genomics, structural genomics consortium,; HET: GDP; 1.73A {Homo sapiens}
Probab=34.52 E-value=10 Score=25.37 Aligned_cols=12 Identities=17% Similarity=0.158 Sum_probs=11.0
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 23 i~~~G~~~~GKs 34 (201)
T 2q3h_A 23 CVLVGDGAVGKT 34 (201)
T ss_dssp EEEECSTTSSHH
T ss_pred EEEECCCCCCHH
Confidence 679999999997
No 131
>2h17_A ADP-ribosylation factor-like protein 5A; GDP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GDP; 1.70A {Homo sapiens} PDB: 2h16_A* 1z6y_A* 1yzg_A*
Probab=34.31 E-value=10 Score=25.09 Aligned_cols=12 Identities=17% Similarity=0.196 Sum_probs=10.2
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 24 i~v~G~~~~GKS 35 (181)
T 2h17_A 24 VIIVGLDNAGKT 35 (181)
T ss_dssp EEEEEETTSSHH
T ss_pred EEEECCCCCCHH
Confidence 458999999997
No 132
>2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein TRAN; HET: ADP; 2.80A {Aquifex aeolicus} PDB: 2eww_A* 2gsz_A*
Probab=34.15 E-value=10 Score=30.11 Aligned_cols=59 Identities=12% Similarity=0.077 Sum_probs=29.3
Q ss_pred ceEEEEeeeCCCCeEEEEeecCCCccc-cccccceeeeccce-eeecceeeeeccCCCcceee
Q psy17338 62 AFKVVALGDVMDGTIVTIRAGNDENYC-GELRNCTAVMKNQV-AKFNDLRFVGRSGREAHNNK 122 (130)
Q Consensus 62 ~FkVvaLg~V~DGT~Vtv~AGNDEn~~-aELRN~~avmknqv-A~FNDLRFVGRSGRGKsFtl 122 (130)
.|+|-++.. ..|..++++.-..+... .+|- ...++++-. ..=.=+=++|.||.|||=+|
T Consensus 93 r~Rv~~~~~-~~g~~~viR~l~~~~~~l~~lg-~~~~l~~l~~~~g~~i~ivG~~GsGKTTll 153 (372)
T 2ewv_A 93 RFRANVFYQ-RGSVAAALRSLPAEIPEFKKLG-LPDKVLELCHRKMGLILVTGPTGSGKSTTI 153 (372)
T ss_dssp EEEEEEECC-SSSCBEEECCBCSSCCCHHHHC-CCSSHHHHTTSSSEEEEEECSSSSSHHHHH
T ss_pred EEEEEEEec-CCCcEEEEEeCCcccCCHhHcC-CCHHHHHHhhcCCCEEEEECCCCCCHHHHH
Confidence 466655543 45666777655443322 2221 112222211 11112458999999998554
No 133
>2ew1_A RAS-related protein RAB-30; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=34.10 E-value=11 Score=26.28 Aligned_cols=12 Identities=17% Similarity=0.473 Sum_probs=10.8
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 29 i~lvG~~~vGKS 40 (201)
T 2ew1_A 29 IVLIGNAGVGKT 40 (201)
T ss_dssp EEEEESTTSSHH
T ss_pred EEEECcCCCCHH
Confidence 568999999997
No 134
>1f2t_A RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} SCOP: c.37.1.12 PDB: 1f2u_A* 1us8_A*
Probab=34.07 E-value=10 Score=25.99 Aligned_cols=14 Identities=14% Similarity=0.280 Sum_probs=11.1
Q ss_pred eeeeccCCCcceee
Q psy17338 109 RFVGRSGREAHNNK 122 (130)
Q Consensus 109 RFVGRSGRGKsFtl 122 (130)
=++|.+|.|||=-|
T Consensus 27 ~I~G~NGsGKStil 40 (149)
T 1f2t_A 27 LIIGQNGSGKSSLL 40 (149)
T ss_dssp EEECCTTSSHHHHH
T ss_pred EEECCCCCCHHHHH
Confidence 47899999998443
No 135
>3ux8_A Excinuclease ABC, A subunit; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, DN binding protein; HET: ADP; 2.10A {Geobacillus}
Probab=34.07 E-value=10 Score=32.09 Aligned_cols=15 Identities=20% Similarity=0.153 Sum_probs=12.0
Q ss_pred eeeeccCCCcceeeC
Q psy17338 109 RFVGRSGREAHNNKA 123 (130)
Q Consensus 109 RFVGRSGRGKsFtls 123 (130)
=++|.||.|||=-+.
T Consensus 352 aIiGpnGsGKSTLl~ 366 (670)
T 3ux8_A 352 AVTGVSGSGKSTLVN 366 (670)
T ss_dssp EEECSTTSSHHHHHT
T ss_pred EEEeeCCCCHHHHHH
Confidence 378999999996653
No 136
>1nlf_A Regulatory protein REPA; replicative DNA helicase structural changes, replication; 1.95A {Escherichia coli} SCOP: c.37.1.11 PDB: 1g8y_A 1olo_A
Probab=33.82 E-value=11 Score=27.64 Aligned_cols=12 Identities=17% Similarity=0.133 Sum_probs=9.7
Q ss_pred eeeccCCCccee
Q psy17338 110 FVGRSGREAHNN 121 (130)
Q Consensus 110 FVGRSGRGKsFt 121 (130)
++|++|.|||.-
T Consensus 35 i~G~~GsGKTtl 46 (279)
T 1nlf_A 35 LVSPGGAGKSML 46 (279)
T ss_dssp EEESTTSSHHHH
T ss_pred EEcCCCCCHHHH
Confidence 578999999853
No 137
>4aby_A DNA repair protein RECN; hydrolase, double strand break repair, ATPase, nucleotide binding domain; HET: DNA; 3.00A {Deinococcus radiodurans}
Probab=33.55 E-value=4.4 Score=31.14 Aligned_cols=14 Identities=21% Similarity=0.292 Sum_probs=11.6
Q ss_pred eeeeccCCCcceee
Q psy17338 109 RFVGRSGREAHNNK 122 (130)
Q Consensus 109 RFVGRSGRGKsFtl 122 (130)
=++|.+|.|||=-|
T Consensus 64 ~lvG~NGaGKStLl 77 (415)
T 4aby_A 64 AFTGETGAGKSIIV 77 (415)
T ss_dssp EEEESHHHHHHHHT
T ss_pred EEECCCCCCHHHHH
Confidence 36899999999655
No 138
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A
Probab=33.49 E-value=11 Score=31.14 Aligned_cols=14 Identities=36% Similarity=0.351 Sum_probs=11.1
Q ss_pred eeeeccCCCcceee
Q psy17338 109 RFVGRSGREAHNNK 122 (130)
Q Consensus 109 RFVGRSGRGKsFtl 122 (130)
=++|.||.|||=.|
T Consensus 33 ~llGpsGsGKSTLL 46 (381)
T 3rlf_A 33 VFVGPSGCGKSTLL 46 (381)
T ss_dssp EEECCTTSSHHHHH
T ss_pred EEEcCCCchHHHHH
Confidence 46899999998543
No 139
>2oap_1 GSPE-2, type II secretion system protein; hexameric ATPase, hydrolase; HET: ANP; 2.95A {Archaeoglobus fulgidus} PDB: 2oaq_1
Probab=33.42 E-value=21 Score=30.06 Aligned_cols=86 Identities=21% Similarity=0.179 Sum_probs=43.5
Q ss_pred HHhhcCCCCccccCCCceEeecCCCccccCCCCCcceEEEEee-e-CCCCeEEEEeecCCCcc-cccccc---ceeeecc
Q psy17338 27 SLLAEHPGELTRTGCPHVVCTVLPTHWRSNKTLPVAFKVVALG-D-VMDGTIVTIRAGNDENY-CGELRN---CTAVMKN 100 (130)
Q Consensus 27 ~~l~~~~gelv~T~sP~~lCs~LP~HWRsNKtLP~~FkVvaLg-~-V~DGT~Vtv~AGNDEn~-~aELRN---~~avmkn 100 (130)
..++...|.-+...+|.+-+. ||..-|.+-.+ | + .++|+.++|+-=..... ..+|-+ .+..+-+
T Consensus 182 ~~i~~~~g~~i~~~~P~~~~~-lp~g~Rv~~~~---------~~~~~~~G~~i~IR~~~~~~~~~~~l~~~G~~~~~~l~ 251 (511)
T 2oap_1 182 LRLTQRSGKHISIANPIVDAT-LPDGSRLQATF---------GTEVTPRGSSFTIRKFTIEPLTPIDLIEKGTVPSGVLA 251 (511)
T ss_dssp HHHHHHTTCCCBTTBCEEEEE-ETTTEEEEEEC---------SSSSCTTCSEEEEEECCCCCCCHHHHHHTTSSCHHHHH
T ss_pred HHHHHHcCCCccccCcceeee-cCCCeEEEEEE---------CCCccCCCCEEEEEecCCCCCChhhHHhcCCCCHHHHH
Confidence 444555565555567765443 45443333222 2 2 36799999987555442 122211 1111100
Q ss_pred ----ceeeecceeeeeccCCCcceee
Q psy17338 101 ----QVAKFNDLRFVGRSGREAHNNK 122 (130)
Q Consensus 101 ----qvA~FNDLRFVGRSGRGKsFtl 122 (130)
.+.+=.-+=++|.+|+|||=+|
T Consensus 252 ~l~~~v~~g~~i~I~GptGSGKTTlL 277 (511)
T 2oap_1 252 YLWLAIEHKFSAIVVGETASGKTTTL 277 (511)
T ss_dssp HHHHHHHTTCCEEEEESTTSSHHHHH
T ss_pred HHHHHHhCCCEEEEECCCCCCHHHHH
Confidence 1111112568999999998654
No 140
>1w1w_A Structural maintenance of chromosome 1; cohesin, chromosome segregation, cell adhesion, kleisin, MIT cell cycle; HET: ATG; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.12
Probab=33.31 E-value=11 Score=29.86 Aligned_cols=14 Identities=21% Similarity=0.375 Sum_probs=11.2
Q ss_pred eeeeccCCCcceee
Q psy17338 109 RFVGRSGREAHNNK 122 (130)
Q Consensus 109 RFVGRSGRGKsFtl 122 (130)
=++|.+|.|||=-|
T Consensus 30 ~i~G~nG~GKstll 43 (430)
T 1w1w_A 30 SIIGPNGSGKSNMM 43 (430)
T ss_dssp EEECSTTSSHHHHH
T ss_pred EEECCCCCCHHHHH
Confidence 47999999998433
No 141
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A*
Probab=33.24 E-value=11 Score=26.88 Aligned_cols=15 Identities=20% Similarity=0.268 Sum_probs=12.2
Q ss_pred eeeeeccCCCcceee
Q psy17338 108 LRFVGRSGREAHNNK 122 (130)
Q Consensus 108 LRFVGRSGRGKsFtl 122 (130)
+=++|.+|.|||..+
T Consensus 52 ~ll~G~~G~GKTtl~ 66 (254)
T 1ixz_A 52 VLLVGPPGVGKTHLA 66 (254)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 468999999998643
No 142
>2j1l_A RHO-related GTP-binding protein RHOD; GTPase, membrane, prenylation, hydrolase, nucleotide-binding, methylation, lipoprotein, endosome DYNA; HET: GDP; 2.5A {Homo sapiens}
Probab=33.08 E-value=12 Score=25.94 Aligned_cols=12 Identities=25% Similarity=0.412 Sum_probs=10.7
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 37 i~vvG~~~vGKS 48 (214)
T 2j1l_A 37 VVLVGDGGCGKT 48 (214)
T ss_dssp EEEEECTTSSHH
T ss_pred EEEECcCCCCHH
Confidence 568999999997
No 143
>2o52_A RAS-related protein RAB-4B; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.20A {Homo sapiens}
Probab=32.93 E-value=12 Score=25.53 Aligned_cols=12 Identities=17% Similarity=0.432 Sum_probs=10.7
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 28 i~v~G~~~~GKS 39 (200)
T 2o52_A 28 FLVIGSAGTGKS 39 (200)
T ss_dssp EEEEESTTSSHH
T ss_pred EEEECcCCCCHH
Confidence 568999999997
No 144
>2atv_A RERG, RAS-like estrogen-regulated growth inhibitor; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=32.89 E-value=11 Score=25.25 Aligned_cols=12 Identities=33% Similarity=0.559 Sum_probs=10.5
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 31 i~v~G~~~vGKS 42 (196)
T 2atv_A 31 LAIFGRAGVGKS 42 (196)
T ss_dssp EEEECCTTSSHH
T ss_pred EEEECCCCCCHH
Confidence 558999999997
No 145
>2fg5_A RAB-22B, RAS-related protein RAB-31; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.80A {Homo sapiens} SCOP: c.37.1.8
Probab=32.60 E-value=12 Score=25.12 Aligned_cols=12 Identities=17% Similarity=0.401 Sum_probs=10.8
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 26 i~vvG~~~~GKS 37 (192)
T 2fg5_A 26 VCLLGDTGVGKS 37 (192)
T ss_dssp EEEEECTTSSHH
T ss_pred EEEECcCCCCHH
Confidence 568999999997
No 146
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12
Probab=32.56 E-value=6.8 Score=31.53 Aligned_cols=14 Identities=14% Similarity=0.105 Sum_probs=11.1
Q ss_pred eeeeccCCCcceee
Q psy17338 109 RFVGRSGREAHNNK 122 (130)
Q Consensus 109 RFVGRSGRGKsFtl 122 (130)
=.+|.||.|||=.|
T Consensus 30 ~llGpnGsGKSTLL 43 (348)
T 3d31_A 30 VILGPTGAGKTLFL 43 (348)
T ss_dssp EEECCCTHHHHHHH
T ss_pred EEECCCCccHHHHH
Confidence 47899999998543
No 147
>3th5_A RAS-related C3 botulinum toxin substrate 1; rossmann fold, GTPase, GTP binding, protein binding, signali protein; HET: GNP; 2.30A {Homo sapiens}
Probab=38.63 E-value=9.5 Score=25.80 Aligned_cols=31 Identities=16% Similarity=0.038 Sum_probs=19.1
Q ss_pred ccccceeeeccceeeecce--eeeeccCCCcce
Q psy17338 90 ELRNCTAVMKNQVAKFNDL--RFVGRSGREAHN 120 (130)
Q Consensus 90 ELRN~~avmknqvA~FNDL--RFVGRSGRGKsF 120 (130)
-|+....-|.++.-.=..+ =++|.+|.|||=
T Consensus 13 ~~~~~~~~m~~~~~~~~~~ki~v~G~~~~GKSs 45 (204)
T 3th5_A 13 GLVPRGSHMENLYFQGQAIKCVVVGDGAVGKTC 45 (204)
Confidence 3455555566653332333 478999999983
No 148
>1h65_A Chloroplast outer envelope protein OEP34; GTPase, translocon; HET: GDP; 2.0A {Pisum sativum} SCOP: c.37.1.8 PDB: 3bb1_A*
Probab=32.35 E-value=12 Score=27.38 Aligned_cols=12 Identities=17% Similarity=0.423 Sum_probs=10.2
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 42 I~vvG~~g~GKS 53 (270)
T 1h65_A 42 ILVMGKGGVGKS 53 (270)
T ss_dssp EEEEESTTSSHH
T ss_pred EEEECCCCCCHH
Confidence 347999999998
No 149
>1t9h_A YLOQ, probable GTPase ENGC; N-terminal beta-barrel domain with oligonucleotide binding fold, central GTP binding domain; 1.60A {Bacillus subtilis} SCOP: b.40.4.5 c.37.1.8
Probab=32.30 E-value=4.8 Score=31.91 Aligned_cols=13 Identities=31% Similarity=0.468 Sum_probs=11.0
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=|+|.||.|||=
T Consensus 176 ~~lvG~sG~GKST 188 (307)
T 1t9h_A 176 TVFAGQSGVGKSS 188 (307)
T ss_dssp EEEEESHHHHHHH
T ss_pred EEEECCCCCCHHH
Confidence 4689999999983
No 150
>1gwn_A RHO-related GTP-binding protein RHOE; GTPase, inactive GTPase, signal transduction; HET: GTP; 2.1A {Mus musculus} SCOP: c.37.1.8
Probab=31.97 E-value=14 Score=25.67 Aligned_cols=13 Identities=23% Similarity=0.222 Sum_probs=11.2
Q ss_pred ceeeeeccCCCcc
Q psy17338 107 DLRFVGRSGREAH 119 (130)
Q Consensus 107 DLRFVGRSGRGKs 119 (130)
-+=++|.+|.|||
T Consensus 30 ki~vvG~~~vGKS 42 (205)
T 1gwn_A 30 KIVVVGDSQCGKT 42 (205)
T ss_dssp EEEEEESTTSSHH
T ss_pred EEEEECCCCCCHH
Confidence 3669999999997
No 151
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=31.05 E-value=12 Score=29.55 Aligned_cols=14 Identities=29% Similarity=0.401 Sum_probs=11.3
Q ss_pred eeeeccCCCcceee
Q psy17338 109 RFVGRSGREAHNNK 122 (130)
Q Consensus 109 RFVGRSGRGKsFtl 122 (130)
=+||.||.|||=++
T Consensus 133 ~lvG~nGaGKTTll 146 (328)
T 3e70_C 133 MFVGFNGSGKTTTI 146 (328)
T ss_dssp EEECCTTSSHHHHH
T ss_pred EEECCCCCCHHHHH
Confidence 38999999998543
No 152
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=31.00 E-value=12 Score=34.67 Aligned_cols=13 Identities=31% Similarity=0.493 Sum_probs=10.6
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=.||+||.|||=
T Consensus 419 ~~ivG~sGsGKST 431 (1284)
T 3g5u_A 419 VALVGNSGCGKST 431 (1284)
T ss_dssp EEEECCSSSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 3469999999983
No 153
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=30.97 E-value=13 Score=34.71 Aligned_cols=11 Identities=36% Similarity=0.498 Sum_probs=9.9
Q ss_pred eeeeccCCCcc
Q psy17338 109 RFVGRSGREAH 119 (130)
Q Consensus 109 RFVGRSGRGKs 119 (130)
=+||+||.|||
T Consensus 448 aivG~sGsGKS 458 (1321)
T 4f4c_A 448 ALVGSSGCGKS 458 (1321)
T ss_dssp EEEECSSSCHH
T ss_pred EEEecCCCcHH
Confidence 37999999998
No 154
>1jwy_B Dynamin A GTPase domain; dynamin, GTPase, GDP, myosin, fusion-protein, hydrolase; HET: BGC ADP GDP; 2.30A {Dictyostelium discoideum} SCOP: c.37.1.8 PDB: 1jx2_B*
Probab=30.37 E-value=14 Score=27.04 Aligned_cols=12 Identities=17% Similarity=0.271 Sum_probs=10.6
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|++|.|||
T Consensus 27 I~vvG~~~~GKS 38 (315)
T 1jwy_B 27 IVVVGSQSSGKS 38 (315)
T ss_dssp EEEEECSSSSHH
T ss_pred EEEEcCCCCCHH
Confidence 558999999998
No 155
>2npi_A Protein CLP1; CLP1-PCF11 complex, ATP binding, ternary complex, transcript; HET: ATP; 2.95A {Saccharomyces cerevisiae}
Probab=30.28 E-value=13 Score=30.80 Aligned_cols=46 Identities=13% Similarity=0.075 Sum_probs=24.8
Q ss_pred CCeEEEEeecCCCccc---cccccceeeeccceeeeccee----------eeeccCCCcc
Q psy17338 73 DGTIVTIRAGNDENYC---GELRNCTAVMKNQVAKFNDLR----------FVGRSGREAH 119 (130)
Q Consensus 73 DGT~Vtv~AGNDEn~~---aELRN~~avmknqvA~FNDLR----------FVGRSGRGKs 119 (130)
.|+.+.+...++..|. ++- ...-.++|-..+|.|++ .+|+||.|||
T Consensus 94 ~~~~l~i~~~~~~e~~~~~~~~-~~mi~~~nl~~~y~~vsl~i~~Ge~v~IvGpnGsGKS 152 (460)
T 2npi_A 94 EETELLWKCPDLTTNTITVKPN-HTMKYIYNLHFMLEKIRMSNFEGPRVVIVGGSQTGKT 152 (460)
T ss_dssp SSCEEEEECTTCCSSSCCCEEC-CTHHHHHHHHHHHHHHHHHSSSCCCEEEEESTTSSHH
T ss_pred cceEEEEecCCccceeecCCCC-cchhhhhhhhehhhcCceEeCCCCEEEEECCCCCCHH
Confidence 3455556655554444 221 11222344444555555 4799999998
No 156
>3t34_A Dynamin-related protein 1A, linker, dynamin-relat 1A; dynamin-like protein 1A, GTPase, membrane fission, motor Pro; HET: GDP; 2.40A {Arabidopsis thaliana} PDB: 3t35_A*
Probab=30.13 E-value=13 Score=28.50 Aligned_cols=13 Identities=15% Similarity=0.258 Sum_probs=11.0
Q ss_pred ceeeeeccCCCcc
Q psy17338 107 DLRFVGRSGREAH 119 (130)
Q Consensus 107 DLRFVGRSGRGKs 119 (130)
-+=+||.+|.|||
T Consensus 36 ~I~vvG~~~sGKS 48 (360)
T 3t34_A 36 AIAVVGGQSSGKS 48 (360)
T ss_dssp EEEEECBTTSSHH
T ss_pred EEEEECCCCCcHH
Confidence 4558999999998
No 157
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=29.95 E-value=13 Score=25.49 Aligned_cols=10 Identities=20% Similarity=0.468 Sum_probs=7.5
Q ss_pred eeeccCCCcc
Q psy17338 110 FVGRSGREAH 119 (130)
Q Consensus 110 FVGRSGRGKs 119 (130)
+.|++|.||+
T Consensus 35 i~G~pG~GKT 44 (251)
T 2zts_A 35 LTGGTGTGKT 44 (251)
T ss_dssp EECCTTSSHH
T ss_pred EEeCCCCCHH
Confidence 3578888886
No 158
>2f7s_A C25KG, RAS-related protein RAB-27B; G-protein, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2iez_A*
Probab=29.69 E-value=13 Score=25.19 Aligned_cols=12 Identities=33% Similarity=0.360 Sum_probs=10.7
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 28 i~vvG~~~~GKS 39 (217)
T 2f7s_A 28 LLALGDSGVGKT 39 (217)
T ss_dssp EEEESCTTSSHH
T ss_pred EEEECcCCCCHH
Confidence 568999999997
No 159
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=29.63 E-value=1.2e+02 Score=24.12 Aligned_cols=55 Identities=18% Similarity=0.272 Sum_probs=38.3
Q ss_pred CCCcceEEEEeeeCCCC------------------eEEEEeecCCCcccc-----cc-----------------------
Q psy17338 58 TLPVAFKVVALGDVMDG------------------TIVTIRAGNDENYCG-----EL----------------------- 91 (130)
Q Consensus 58 tLP~~FkVvaLg~V~DG------------------T~Vtv~AGNDEn~~a-----EL----------------------- 91 (130)
.+|.+=-|+..||+-|. ..|.+-+||-|.+.. ++
T Consensus 76 ~i~~~D~vi~aGDl~~~g~~~e~~~~~~~L~~l~~~~v~~V~GNHD~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (296)
T 3rl5_A 76 QMPYGDILLHTGDFTELGLPSEVKKFNDWLGNLPYEYKIVIAGNHELTFDKEFMADLVKQDYYRFPSVSKLKPEDFDNVQ 155 (296)
T ss_dssp CCCSCSEEEECSCCSSSCCHHHHHHHHHHHHTSCCSEEEECCCTTCGGGCHHHHHHHTTSCGGGSHHHHTCCHHHHTTTG
T ss_pred ccCCCCEEEECCcccCCCCHHHHHHHHHHHHhCCCCeEEEEcCCcccccchhhhhhhhcccccccccccccccchhhhHh
Confidence 45666667778988753 247888999887432 11
Q ss_pred --ccceeeeccceeeecceeeee
Q psy17338 92 --RNCTAVMKNQVAKFNDLRFVG 112 (130)
Q Consensus 92 --RN~~avmknqvA~FNDLRFVG 112 (130)
-.....+.+++..|+.+||.|
T Consensus 156 ~l~~~~~~L~~~~~~i~Gl~i~G 178 (296)
T 3rl5_A 156 SLLTNSIYLQDSEVTVKGFRIYG 178 (296)
T ss_dssp GGCTTSEECSSEEEEETTEEEEE
T ss_pred hhcCCeEEecCCcEEECCEEEEE
Confidence 122345788899999999999
No 160
>1knx_A Probable HPR(Ser) kinase/phosphatase; HPR kinase, HPR kinase/phosphatase, HPRK/P, P-loop, walker A BOX, catabolite repression; 2.50A {Mycoplasma pneumoniae} SCOP: c.98.2.1 c.91.1.2
Probab=29.51 E-value=14 Score=29.82 Aligned_cols=12 Identities=33% Similarity=0.498 Sum_probs=10.5
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=|.|.||.|||
T Consensus 150 vli~G~sG~GKS 161 (312)
T 1knx_A 150 VLLTGRSGIGKS 161 (312)
T ss_dssp EEEEESSSSSHH
T ss_pred EEEEcCCCCCHH
Confidence 458999999998
No 161
>1zd9_A ADP-ribosylation factor-like 10B; transport protein, GDP-binding, membrane trafficking, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2al7_A* 2h18_A*
Probab=29.50 E-value=14 Score=24.71 Aligned_cols=12 Identities=25% Similarity=0.227 Sum_probs=10.5
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 25 i~v~G~~~~GKS 36 (188)
T 1zd9_A 25 LTLVGLQYSGKT 36 (188)
T ss_dssp EEEECSTTSSHH
T ss_pred EEEECCCCCCHH
Confidence 458999999997
No 162
>2p5s_A RAS and EF-hand domain containing; G-protein, RAB, GDP, structural genomics, SGC, structural genomics consortium, signaling protein; HET: GDP; 2.15A {Homo sapiens}
Probab=29.06 E-value=14 Score=24.93 Aligned_cols=12 Identities=8% Similarity=0.207 Sum_probs=10.5
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 31 i~v~G~~~~GKS 42 (199)
T 2p5s_A 31 IVLAGDAAVGKS 42 (199)
T ss_dssp EEEESSTTSSHH
T ss_pred EEEECcCCCCHH
Confidence 568999999997
No 163
>2b6h_A ADP-ribosylation factor 5; membrane trafficking, GDP, structural genomics, structural G consortium, SGC, protein transport; HET: GDP; 1.76A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z6x_A* 3aq4_A*
Probab=28.54 E-value=15 Score=24.85 Aligned_cols=12 Identities=17% Similarity=0.249 Sum_probs=10.8
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 32 i~v~G~~~vGKS 43 (192)
T 2b6h_A 32 ILMVGLDAAGKT 43 (192)
T ss_dssp EEEEESTTSSHH
T ss_pred EEEECCCCCCHH
Confidence 668999999997
No 164
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=28.51 E-value=11 Score=29.07 Aligned_cols=15 Identities=13% Similarity=0.317 Sum_probs=12.3
Q ss_pred eeeeeccCCCcceee
Q psy17338 108 LRFVGRSGREAHNNK 122 (130)
Q Consensus 108 LRFVGRSGRGKsFtl 122 (130)
+=|+|.+|.||+.++
T Consensus 108 i~lvG~~GsGKTTl~ 122 (296)
T 2px0_A 108 IVLFGSTGAGKTTTL 122 (296)
T ss_dssp EEEEESTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 448999999999765
No 165
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae}
Probab=28.21 E-value=14 Score=27.00 Aligned_cols=13 Identities=23% Similarity=0.376 Sum_probs=10.7
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=++|-||.|||-
T Consensus 35 i~l~G~~GsGKST 47 (253)
T 2p5t_B 35 ILLGGQSGAGKTT 47 (253)
T ss_dssp EEEESCGGGTTHH
T ss_pred EEEECCCCCCHHH
Confidence 4578999999983
No 166
>3ksp_A Calcium/calmodulin-dependent kinase II associatio; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG; HET: MSE NHE; 2.59A {Exiguobacterium sibiricum 255-15}
Probab=28.06 E-value=11 Score=26.61 Aligned_cols=28 Identities=18% Similarity=0.337 Sum_probs=22.0
Q ss_pred cccccccceeeeccceeeecceeeeeccCC
Q psy17338 87 YCGELRNCTAVMKNQVAKFNDLRFVGRSGR 116 (130)
Q Consensus 87 ~~aELRN~~avmknqvA~FNDLRFVGRSGR 116 (130)
+-|++|+-.+.|..-.+ .||.|||.||+
T Consensus 19 ~~A~~~~D~~~L~~LL~--ddf~~v~~sG~ 46 (129)
T 3ksp_A 19 HAYLMEGNREAMHQLLS--SDFSFIDGQGR 46 (129)
T ss_dssp HHHHHHTCHHHHHHHEE--EEEEEECTTCC
T ss_pred HHHHHhCCHHHHHhhcC--CCEEEECCCCC
Confidence 45677777777777666 59999999997
No 167
>1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} SCOP: b.40.6.3 c.37.1.12 PDB: 1oxs_C 1oxt_A 1oxu_A* 1oxv_A*
Probab=28.05 E-value=7.1 Score=31.31 Aligned_cols=13 Identities=23% Similarity=0.289 Sum_probs=10.5
Q ss_pred eeeccCCCcceee
Q psy17338 110 FVGRSGREAHNNK 122 (130)
Q Consensus 110 FVGRSGRGKsFtl 122 (130)
.+|.||.|||=.|
T Consensus 36 llGpnGsGKSTLL 48 (353)
T 1oxx_K 36 ILGPSGAGKTTFM 48 (353)
T ss_dssp EECSCHHHHHHHH
T ss_pred EECCCCCcHHHHH
Confidence 6899999998543
No 168
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus}
Probab=28.03 E-value=15 Score=30.85 Aligned_cols=12 Identities=25% Similarity=0.432 Sum_probs=10.3
Q ss_pred eeeeccCCCcce
Q psy17338 109 RFVGRSGREAHN 120 (130)
Q Consensus 109 RFVGRSGRGKsF 120 (130)
=.+|.||.|||=
T Consensus 51 ~LvG~NGaGKST 62 (538)
T 1yqt_A 51 GIVGPNGTGKST 62 (538)
T ss_dssp EEECCTTSSHHH
T ss_pred EEECCCCCCHHH
Confidence 469999999984
No 169
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum}
Probab=27.93 E-value=12 Score=24.18 Aligned_cols=15 Identities=13% Similarity=0.180 Sum_probs=12.2
Q ss_pred ceeeeeccCCCccee
Q psy17338 107 DLRFVGRSGREAHNN 121 (130)
Q Consensus 107 DLRFVGRSGRGKsFt 121 (130)
-+=++|-+|.||+.-
T Consensus 45 ~vll~G~~G~GKT~l 59 (187)
T 2p65_A 45 NPILLGDPGVGKTAI 59 (187)
T ss_dssp EEEEESCGGGCHHHH
T ss_pred ceEEECCCCCCHHHH
Confidence 456899999999854
No 170
>3def_A T7I23.11 protein; chloroplast, TOC33, GTPase, hydrolase; HET: GDP; 1.96A {Arabidopsis thaliana} PDB: 3bb3_A* 3bb4_A* 2j3e_A*
Probab=27.80 E-value=16 Score=26.67 Aligned_cols=12 Identities=17% Similarity=0.401 Sum_probs=10.4
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 39 I~lvG~~g~GKS 50 (262)
T 3def_A 39 VLVLGKGGVGKS 50 (262)
T ss_dssp EEEEECTTSSHH
T ss_pred EEEECCCCCCHH
Confidence 458999999997
No 171
>2hup_A RAS-related protein RAB-43; G-protein, GDP, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.05A {Homo sapiens}
Probab=27.70 E-value=16 Score=24.92 Aligned_cols=12 Identities=25% Similarity=0.326 Sum_probs=10.8
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 32 i~vvG~~~vGKS 43 (201)
T 2hup_A 32 LVLVGDASVGKT 43 (201)
T ss_dssp EEEEECTTSSHH
T ss_pred EEEECcCCCCHH
Confidence 668999999997
No 172
>4dhe_A Probable GTP-binding protein ENGB; melioidosis, RAS-like GTPase, cell division, cell cycle, SEP GTP-binding; 2.20A {Burkholderia thailandensis}
Probab=27.60 E-value=7.1 Score=26.62 Aligned_cols=12 Identities=33% Similarity=0.589 Sum_probs=10.3
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|.+|.|||
T Consensus 32 i~v~G~~~~GKS 43 (223)
T 4dhe_A 32 IAFAGRSNAGKS 43 (223)
T ss_dssp EEEEESCHHHHH
T ss_pred EEEEcCCCCCHH
Confidence 457999999997
No 173
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20
Probab=27.47 E-value=16 Score=26.69 Aligned_cols=15 Identities=20% Similarity=0.268 Sum_probs=12.3
Q ss_pred eeeeeccCCCcceee
Q psy17338 108 LRFVGRSGREAHNNK 122 (130)
Q Consensus 108 LRFVGRSGRGKsFtl 122 (130)
+=++|.+|.||+..+
T Consensus 76 vll~Gp~GtGKTtl~ 90 (278)
T 1iy2_A 76 VLLVGPPGVGKTHLA 90 (278)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCcChHHHHH
Confidence 568999999998643
No 174
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=27.31 E-value=16 Score=25.53 Aligned_cols=12 Identities=17% Similarity=0.244 Sum_probs=10.6
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+-++|-+|.|||
T Consensus 28 i~~~G~~GsGKs 39 (211)
T 1m7g_A 28 IWLTGLSASGKS 39 (211)
T ss_dssp EEEECSTTSSHH
T ss_pred EEEECCCCCCHH
Confidence 567999999997
No 175
>3nwj_A ATSK2; P loop, shikimate, nucleoside monophosphate kinase, shikimat ATP binding, chloroplast, transferase; 2.35A {Arabidopsis thaliana}
Probab=27.23 E-value=16 Score=27.77 Aligned_cols=13 Identities=23% Similarity=0.394 Sum_probs=11.3
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+-++|-||.|||-
T Consensus 51 i~l~G~~GsGKST 63 (250)
T 3nwj_A 51 MYLVGMMGSGKTT 63 (250)
T ss_dssp EEEECSTTSCHHH
T ss_pred EEEECCCCCCHHH
Confidence 6689999999984
No 176
>3euj_A Chromosome partition protein MUKB, linker; MUKB, MUKE, chromosome condensation, condensin, SMC, N subunit, ABC-type ATPase, WHD, ATP-binding; HET: AGS; 3.10A {Haemophilus ducreyi} PDB: 3euk_A*
Probab=27.04 E-value=16 Score=31.10 Aligned_cols=14 Identities=14% Similarity=0.278 Sum_probs=11.4
Q ss_pred eeeeeccCCCccee
Q psy17338 108 LRFVGRSGREAHNN 121 (130)
Q Consensus 108 LRFVGRSGRGKsFt 121 (130)
+-++|.||.|||=.
T Consensus 32 ~~liG~nGsGKSTL 45 (483)
T 3euj_A 32 TTLSGGNGAGKSTT 45 (483)
T ss_dssp EEEECCTTSSHHHH
T ss_pred EEEECCCCCcHHHH
Confidence 45899999999843
No 177
>1puj_A YLQF, conserved hypothetical protein YLQF; structural genomics, nysgxrc T18, GTPase, PSI, protein structure initiative; HET: GNP; 2.00A {Bacillus subtilis} SCOP: c.37.1.8
Probab=26.94 E-value=17 Score=27.78 Aligned_cols=12 Identities=8% Similarity=0.066 Sum_probs=10.8
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=+||++|.|||
T Consensus 123 v~~vG~~nvGKS 134 (282)
T 1puj_A 123 ALIIGIPNVGKS 134 (282)
T ss_dssp EEEEESTTSSHH
T ss_pred EEEEecCCCchH
Confidence 568999999998
No 178
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana}
Probab=26.75 E-value=16 Score=29.54 Aligned_cols=14 Identities=21% Similarity=0.278 Sum_probs=11.5
Q ss_pred eeeeccCCCcceee
Q psy17338 109 RFVGRSGREAHNNK 122 (130)
Q Consensus 109 RFVGRSGRGKsFtl 122 (130)
=+||.||.|||=++
T Consensus 161 ~lvG~nGsGKTTll 174 (359)
T 2og2_A 161 MIVGVNGGGKTTSL 174 (359)
T ss_dssp EEECCTTSCHHHHH
T ss_pred EEEcCCCChHHHHH
Confidence 48999999998654
No 179
>2www_A Methylmalonic aciduria type A protein, mitochondrial; transport protein, nucleotide-binding; HET: GDP 2PE; 2.64A {Homo sapiens}
Probab=26.35 E-value=17 Score=28.49 Aligned_cols=13 Identities=15% Similarity=0.335 Sum_probs=10.7
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=++|++|.|||=
T Consensus 77 v~lvG~pgaGKST 89 (349)
T 2www_A 77 VGLSGPPGAGKST 89 (349)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEEcCCCCCHHH
Confidence 4489999999983
No 180
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=26.11 E-value=17 Score=33.77 Aligned_cols=12 Identities=42% Similarity=0.567 Sum_probs=10.2
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=+||+||.|||
T Consensus 1062 v~ivG~sGsGKS 1073 (1284)
T 3g5u_A 1062 LALVGSSGCGKS 1073 (1284)
T ss_dssp EEEECSSSTTHH
T ss_pred EEEECCCCCCHH
Confidence 347999999998
No 181
>3qks_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATPase, exonuclease, endonucle binding, DNA binding; HET: DNA; 2.10A {Pyrococcus furiosus} PDB: 3qkr_A*
Probab=25.96 E-value=17 Score=25.95 Aligned_cols=14 Identities=14% Similarity=0.325 Sum_probs=11.1
Q ss_pred eeeccCCCcceeeC
Q psy17338 110 FVGRSGREAHNNKA 123 (130)
Q Consensus 110 FVGRSGRGKsFtls 123 (130)
++|.+|.|||--|.
T Consensus 28 I~G~NgsGKStil~ 41 (203)
T 3qks_A 28 IIGQNGSGKSSLLD 41 (203)
T ss_dssp EECCTTSSHHHHHH
T ss_pred EEcCCCCCHHHHHH
Confidence 67999999985443
No 182
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii}
Probab=25.84 E-value=17 Score=28.91 Aligned_cols=13 Identities=8% Similarity=0.095 Sum_probs=10.4
Q ss_pred eeeeccCCCccee
Q psy17338 109 RFVGRSGREAHNN 121 (130)
Q Consensus 109 RFVGRSGRGKsFt 121 (130)
=++|-||+|||-.
T Consensus 96 gI~GpsGSGKSTl 108 (321)
T 3tqc_A 96 GIAGSVAVGKSTT 108 (321)
T ss_dssp EEECCTTSSHHHH
T ss_pred EEECCCCCCHHHH
Confidence 4789999999843
No 183
>3q3j_B RHO-related GTP-binding protein RHO6; RAS-binding domain, plexin, small GTPase, structural genomic consortium, SGC; HET: GNP; 1.97A {Homo sapiens} PDB: 2rex_B* 2cls_A*
Probab=25.16 E-value=18 Score=25.07 Aligned_cols=30 Identities=23% Similarity=0.149 Sum_probs=11.4
Q ss_pred CccccccccceeeeccceeeecceeeeeccCCCcc
Q psy17338 85 ENYCGELRNCTAVMKNQVAKFNDLRFVGRSGREAH 119 (130)
Q Consensus 85 En~~aELRN~~avmknqvA~FNDLRFVGRSGRGKs 119 (130)
||..+|-|.....++. | -+=++|.+|.|||
T Consensus 12 ~~~~~q~~~~~~~~~~----~-ki~vvG~~~vGKS 41 (214)
T 3q3j_B 12 ENLYFQGRAPQPVVAR----C-KLVLVGDVQCGKT 41 (214)
T ss_dssp ---------------C----E-EEEEECSTTSSHH
T ss_pred hhhHhhccCCCCccce----E-EEEEECcCCCCHH
Confidence 4556666666655542 2 2558999999997
No 184
>2yh5_A DAPX protein, BAMC; lipid binding protein, lipoprotein, BAM complex; 1.25A {Escherichia coli} PDB: 3sns_A
Probab=25.01 E-value=84 Score=22.14 Aligned_cols=46 Identities=11% Similarity=0.090 Sum_probs=29.2
Q ss_pred CCCCcceEEEEeeeCCCCeEEEEeecCCCcccc-ccccceeeeccce
Q psy17338 57 KTLPVAFKVVALGDVMDGTIVTIRAGNDENYCG-ELRNCTAVMKNQV 102 (130)
Q Consensus 57 KtLP~~FkVvaLg~V~DGT~Vtv~AGNDEn~~a-ELRN~~avmknqv 102 (130)
..++..--.|.+++..++|.|+|.-.+.....+ ..+.-..+++++.
T Consensus 71 ~~~~~~~Y~i~v~~~g~~t~V~v~d~~G~p~~~~~a~~ll~~L~~~l 117 (127)
T 2yh5_A 71 PGLASGDYKLQVGDLDNRSSLQFIDPKGHTLTQSQNDALVAVFQAAF 117 (127)
T ss_dssp CCCCSEEEEEEEEEETTEEEEEEECTTSCBCCHHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEEEeCCCceEEEEECCCCCCCCHHHHHHHHHHHHHHH
Confidence 445555555788899999999999776665444 3333334444443
No 185
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=24.95 E-value=1.2e+02 Score=21.12 Aligned_cols=42 Identities=12% Similarity=0.184 Sum_probs=26.5
Q ss_pred CeEEEEeecCCCccccc-----cccc-----eeeeccce-eeecceeeeeccC
Q psy17338 74 GTIVTIRAGNDENYCGE-----LRNC-----TAVMKNQV-AKFNDLRFVGRSG 115 (130)
Q Consensus 74 GT~Vtv~AGNDEn~~aE-----LRN~-----~avmknqv-A~FNDLRFVGRSG 115 (130)
+..|.+-.||-|.+... ++.. ...+.++. -.+++++|+|-.+
T Consensus 89 ~~pv~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~g~~~ 141 (260)
T 2yvt_A 89 GVKTFVVPGKNDAPLKIFLRAAYEAETAYPNIRVLHEGFAGWRGEFEVIGFGG 141 (260)
T ss_dssp CSEEEEECCTTSCCHHHHHHHHHHTTTTCTTEEECSSEEEEETTTEEEEEECS
T ss_pred CCcEEEEcCCCCchhhhhHHHHhhhccCCcceEEecCcceEEECCEEEEecCC
Confidence 45678889998876432 2221 13344555 6778899998764
No 186
>4f9p_D 103.2 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; 3.52A {Mus musculus}
Probab=24.79 E-value=19 Score=29.06 Aligned_cols=20 Identities=30% Similarity=0.411 Sum_probs=15.5
Q ss_pred eeeeccCCCcceeeCCCCccC
Q psy17338 109 RFVGRSGREAHNNKAPDSYDL 129 (130)
Q Consensus 109 RFVGRSGRGKsFtls~~~~~~ 129 (130)
||-| ||.|..|+|.|.+...
T Consensus 197 RFSg-S~sgt~ftLtIs~lq~ 216 (254)
T 4f9p_D 197 RFSG-SGSGTEFTLSINSVET 216 (254)
T ss_dssp TCEE-ECCTTEEEEEEESCCT
T ss_pred CEEe-eeeCCEEEEEECCCCH
Confidence 6766 7899999998876543
No 187
>2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A
Probab=24.53 E-value=19 Score=31.23 Aligned_cols=14 Identities=21% Similarity=0.247 Sum_probs=11.2
Q ss_pred eeeeccCCCcceee
Q psy17338 109 RFVGRSGREAHNNK 122 (130)
Q Consensus 109 RFVGRSGRGKsFtl 122 (130)
=+||.||.|||=++
T Consensus 297 ~LVGpNGSGKTTLl 310 (503)
T 2yhs_A 297 LMVGVNGVGKTTTI 310 (503)
T ss_dssp EEECCTTSSHHHHH
T ss_pred EEECCCcccHHHHH
Confidence 37999999998544
No 188
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=24.48 E-value=19 Score=27.74 Aligned_cols=13 Identities=23% Similarity=0.345 Sum_probs=10.0
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+-.+|.||.|||-
T Consensus 34 i~I~G~sGsGKST 46 (290)
T 1odf_A 34 IFFSGPQGSGKSF 46 (290)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 3467899999973
No 189
>3cnl_A YLQF, putative uncharacterized protein; circular permutation, GNP, signaling protein; HET: GNP; 2.00A {Thermotoga maritima} PDB: 3cnn_A* 3cno_A*
Probab=23.89 E-value=21 Score=26.97 Aligned_cols=13 Identities=15% Similarity=0.215 Sum_probs=11.1
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=+||.||.|||=
T Consensus 102 v~~vG~~~vGKSs 114 (262)
T 3cnl_A 102 VLIVGVPNTGKST 114 (262)
T ss_dssp EEEEESTTSSHHH
T ss_pred eEEeCCCCCCHHH
Confidence 5689999999983
No 190
>2g3y_A GTP-binding protein GEM; small GTPase, GDP, inactive state, RGK family, structur genomics, structural genomics consortium, SGC, signaling PR; HET: GDP; 2.40A {Homo sapiens} SCOP: c.37.1.8
Probab=23.88 E-value=20 Score=25.78 Aligned_cols=12 Identities=17% Similarity=0.426 Sum_probs=10.6
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=+||++|.|||
T Consensus 40 VvlvG~~~vGKS 51 (211)
T 2g3y_A 40 VVLIGEQGVGKS 51 (211)
T ss_dssp EEEECCTTSSHH
T ss_pred EEEECCCCCCHH
Confidence 568999999997
No 191
>1ytm_A Phosphoenolpyruvate carboxykinase [ATP], phosphoenolpyruvate; domain closure, nucleotide binding; HET: ATP; 2.20A {Anaerobiospirillum succiniciproducens} PDB: 1yvy_A
Probab=23.78 E-value=16 Score=32.04 Aligned_cols=17 Identities=29% Similarity=0.380 Sum_probs=13.4
Q ss_pred eeeeeccCCCcceeeCCC
Q psy17338 108 LRFVGRSGREAHNNKAPD 125 (130)
Q Consensus 108 LRFVGRSGRGKsFtls~~ 125 (130)
.=|.|=||.||| |||.|
T Consensus 238 ~~ffGlSGtGKT-TLs~d 254 (532)
T 1ytm_A 238 AIFFGLSGTGKT-TLSTD 254 (532)
T ss_dssp EEEECCTTSSHH-HHHCC
T ss_pred EEEEecCCCCHH-HHhhC
Confidence 457899999999 66654
No 192
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20
Probab=23.65 E-value=20 Score=25.51 Aligned_cols=14 Identities=21% Similarity=0.230 Sum_probs=11.6
Q ss_pred eeeeeccCCCccee
Q psy17338 108 LRFVGRSGREAHNN 121 (130)
Q Consensus 108 LRFVGRSGRGKsFt 121 (130)
+=++|-+|.||+.-
T Consensus 48 vll~G~~GtGKT~l 61 (257)
T 1lv7_A 48 VLMVGPPGTGKTLL 61 (257)
T ss_dssp EEEECCTTSCHHHH
T ss_pred EEEECcCCCCHHHH
Confidence 55899999999853
No 193
>4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A*
Probab=23.47 E-value=22 Score=30.60 Aligned_cols=20 Identities=15% Similarity=0.371 Sum_probs=15.6
Q ss_pred eecCCCccc--cCCCCCcceEE
Q psy17338 46 CTVLPTHWR--SNKTLPVAFKV 65 (130)
Q Consensus 46 Cs~LP~HWR--sNKtLP~~FkV 65 (130)
|-.||+-.- ++.+||.+|+-
T Consensus 44 ~~~~p~~~~~~~~~~LPDpf~~ 65 (433)
T 4g4g_A 44 TCSVSDNYPTVNSAKLPDPFTT 65 (433)
T ss_dssp -CCCCSSCCCCCCSSCCCTTBC
T ss_pred CCCCCCCCCCccccCCCCcccc
Confidence 778888764 89999999973
No 194
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=23.47 E-value=20 Score=30.95 Aligned_cols=15 Identities=27% Similarity=0.370 Sum_probs=11.8
Q ss_pred eeeeeccCCCcceee
Q psy17338 108 LRFVGRSGREAHNNK 122 (130)
Q Consensus 108 LRFVGRSGRGKsFtl 122 (130)
+=.+|.||.|||=.|
T Consensus 106 ~~LvGpNGaGKSTLL 120 (608)
T 3j16_B 106 LGLVGTNGIGKSTAL 120 (608)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCChHHHHH
Confidence 457999999998543
No 195
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=23.44 E-value=21 Score=26.38 Aligned_cols=19 Identities=16% Similarity=0.267 Sum_probs=14.2
Q ss_pred eecceeeeeccCCCcceee
Q psy17338 104 KFNDLRFVGRSGREAHNNK 122 (130)
Q Consensus 104 ~FNDLRFVGRSGRGKsFtl 122 (130)
++.-+=|+|.+|.||+-.+
T Consensus 35 ~~~~~ll~Gp~G~GKTtl~ 53 (354)
T 1sxj_E 35 DLPHLLLYGPNGTGKKTRC 53 (354)
T ss_dssp CCCCEEEECSTTSSHHHHH
T ss_pred CCCeEEEECCCCCCHHHHH
Confidence 3333889999999998543
No 196
>2olr_A Phosphoenolpyruvate carboxykinase; carbon dioxide, lyase; HET: ATP; 1.60A {Escherichia coli K12} SCOP: c.91.1.1 c.109.1.1 PDB: 1k3c_A* 1k3d_A* 1aq2_A* 2olq_A* 1os1_A* 2pxz_X* 1ayl_A* 2py7_X* 1oen_A 1ylh_A* 1ygg_A*
Probab=23.38 E-value=16 Score=32.21 Aligned_cols=17 Identities=29% Similarity=0.387 Sum_probs=13.5
Q ss_pred eeeeeccCCCcceeeCCC
Q psy17338 108 LRFVGRSGREAHNNKAPD 125 (130)
Q Consensus 108 LRFVGRSGRGKsFtls~~ 125 (130)
.=|.|=||.||| |||.|
T Consensus 244 ~lffGlSGtGKT-TLs~d 260 (540)
T 2olr_A 244 AVFFGLSGTGKT-TLSTD 260 (540)
T ss_dssp EEEECSTTSSHH-HHHCC
T ss_pred EEEEccCCCCHH-HHhcC
Confidence 558899999999 66654
No 197
>2x2e_A Dynamin-1; nitration, hydrolase, membrane fission, nucleotide-binding, endocytosis, motor protein; HET: GDP; 2.00A {Homo sapiens} PDB: 2x2f_A* 3zyc_A* 3zys_A
Probab=23.09 E-value=21 Score=27.43 Aligned_cols=12 Identities=17% Similarity=0.277 Sum_probs=10.7
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=+||++|.|||
T Consensus 34 I~vvG~~~~GKS 45 (353)
T 2x2e_A 34 IAVVGGQSAGKS 45 (353)
T ss_dssp EEEECBTTSSHH
T ss_pred EEEECCCCCCHH
Confidence 558999999998
No 198
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=22.99 E-value=24 Score=26.69 Aligned_cols=12 Identities=17% Similarity=0.332 Sum_probs=9.7
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=++|-||.|||
T Consensus 36 ivl~G~sGsGKS 47 (287)
T 1gvn_B 36 FLLGGQPGSGKT 47 (287)
T ss_dssp EEEECCTTSCTH
T ss_pred EEEECCCCCCHH
Confidence 346899999997
No 199
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus}
Probab=22.91 E-value=21 Score=30.15 Aligned_cols=12 Identities=17% Similarity=0.376 Sum_probs=9.8
Q ss_pred eeeccCCCccee
Q psy17338 110 FVGRSGREAHNN 121 (130)
Q Consensus 110 FVGRSGRGKsFt 121 (130)
.+|.||.|||=-
T Consensus 30 LiGpNGaGKSTL 41 (538)
T 3ozx_A 30 VLGKNGVGKTTV 41 (538)
T ss_dssp EECCTTSSHHHH
T ss_pred EECCCCCcHHHH
Confidence 589999999843
No 200
>1ii2_A Phosphoenolpyruvate carboxykinase; phosphate binding loop, lyase; 2.00A {Trypanosoma cruzi} SCOP: c.91.1.1 c.109.1.1
Probab=22.89 E-value=18 Score=31.63 Aligned_cols=17 Identities=29% Similarity=0.389 Sum_probs=13.2
Q ss_pred eeeeeccCCCcceeeCCC
Q psy17338 108 LRFVGRSGREAHNNKAPD 125 (130)
Q Consensus 108 LRFVGRSGRGKsFtls~~ 125 (130)
.=|.|=||.||| |||.|
T Consensus 216 ~~ffGlSGtGKT-TLs~d 232 (524)
T 1ii2_A 216 TVFFGLSGTGKT-TLSAD 232 (524)
T ss_dssp EEEECCTTSSHH-HHHCC
T ss_pred EEEEccCCcchh-hhhhc
Confidence 347889999999 66654
No 201
>2qag_A Septin-2, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=22.86 E-value=20 Score=28.22 Aligned_cols=13 Identities=38% Similarity=0.475 Sum_probs=11.0
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=+||.||.|||=
T Consensus 40 I~vvG~~g~GKST 52 (361)
T 2qag_A 40 LMVVGESGLGKST 52 (361)
T ss_dssp EEECCCTTSCHHH
T ss_pred EEEEcCCCCCHHH
Confidence 4689999999983
No 202
>2zou_A Spondin-1; beta-sandwich, extracellular protein, cell adhesion, extrace matrix, glycoprotein, secreted; 1.45A {Homo sapiens}
Probab=22.81 E-value=57 Score=23.25 Aligned_cols=42 Identities=17% Similarity=0.158 Sum_probs=20.4
Q ss_pred CCCceEeecCCCccccCCCCCcceEEEEee----eCCCCe-EEEEee
Q psy17338 40 GCPHVVCTVLPTHWRSNKTLPVAFKVVALG----DVMDGT-IVTIRA 81 (130)
Q Consensus 40 ~sP~~lCs~LP~HWRsNKtLP~~FkVvaLg----~V~DGT-~Vtv~A 81 (130)
|.|.--|..+|.|.-....-+.+|++..-| -+|+.+ .|||.+
T Consensus 1 gap~~aC~~~p~~~~~~~~~~~py~i~i~~~~~~y~pG~~~~VtL~~ 47 (149)
T 2zou_A 1 GSSEGYCSRILRAQGTRREGYTEFSLRVEGDPDFYKPGTSYRVTLSA 47 (149)
T ss_dssp -----CCTTC-------CCSCCSEEEEETTCCSSBCTTCEEEEEEEE
T ss_pred CCChhhhcCCCCCCCCCCCCCCCEEEEEecCCceEcCCCcEEEEEec
Confidence 467888999999987445567889988743 345554 377763
No 203
>2hjg_A GTP-binding protein ENGA; GTPase ENGA KH-domain, hydrolase; HET: GDP; 2.50A {Bacillus subtilis}
Probab=22.79 E-value=21 Score=28.35 Aligned_cols=12 Identities=17% Similarity=0.379 Sum_probs=10.5
Q ss_pred eeeeeccCCCcc
Q psy17338 108 LRFVGRSGREAH 119 (130)
Q Consensus 108 LRFVGRSGRGKs 119 (130)
+=+||++|.|||
T Consensus 178 i~lvG~~nvGKS 189 (436)
T 2hjg_A 178 FCLIGRPNVGKS 189 (436)
T ss_dssp EEEECSTTSSHH
T ss_pred EEEEcCCCCCHH
Confidence 458999999997
No 204
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A*
Probab=22.75 E-value=17 Score=25.83 Aligned_cols=14 Identities=21% Similarity=0.240 Sum_probs=11.8
Q ss_pred eeeeeccCCCccee
Q psy17338 108 LRFVGRSGREAHNN 121 (130)
Q Consensus 108 LRFVGRSGRGKsFt 121 (130)
+=|.|-+|.||+..
T Consensus 47 vll~G~~GtGKT~l 60 (268)
T 2r62_A 47 VLLVGPPGTGKTLL 60 (268)
T ss_dssp CCCBCSSCSSHHHH
T ss_pred EEEECCCCCcHHHH
Confidence 56899999999864
No 205
>3lda_A DNA repair protein RAD51; DNA binding protein, ATP-binding, DNA damage, DNA recombinat repair, nucleotide-binding; HET: DNA; 2.50A {Saccharomyces cerevisiae} PDB: 1szp_A*
Probab=22.73 E-value=22 Score=28.99 Aligned_cols=12 Identities=8% Similarity=0.135 Sum_probs=9.9
Q ss_pred eeeeccCCCcce
Q psy17338 109 RFVGRSGREAHN 120 (130)
Q Consensus 109 RFVGRSGRGKsF 120 (130)
=++|+||.|||-
T Consensus 182 ~I~G~sGsGKTT 193 (400)
T 3lda_A 182 ELFGEFRTGKSQ 193 (400)
T ss_dssp EEEESTTSSHHH
T ss_pred EEEcCCCCChHH
Confidence 367999999984
No 206
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=22.67 E-value=21 Score=30.65 Aligned_cols=14 Identities=21% Similarity=0.404 Sum_probs=11.2
Q ss_pred eeeeeccCCCccee
Q psy17338 108 LRFVGRSGREAHNN 121 (130)
Q Consensus 108 LRFVGRSGRGKsFt 121 (130)
+=.+|.||.|||=-
T Consensus 120 ~~LiG~NGsGKSTL 133 (607)
T 3bk7_A 120 VGIVGPNGTGKTTA 133 (607)
T ss_dssp EEEECCTTSSHHHH
T ss_pred EEEECCCCChHHHH
Confidence 34799999999843
No 207
>2o5v_A DNA replication and repair protein RECF; ABC ATPase, walker A motif, P-loop, signature motif, replication/recombination complex; HET: DNA; 1.61A {Deinococcus radiodurans}
Probab=22.65 E-value=22 Score=28.64 Aligned_cols=15 Identities=20% Similarity=0.195 Sum_probs=11.8
Q ss_pred eeeeeccCCCcceee
Q psy17338 108 LRFVGRSGREAHNNK 122 (130)
Q Consensus 108 LRFVGRSGRGKsFtl 122 (130)
.=++|.+|.|||=.|
T Consensus 29 ~~i~G~nG~GKttll 43 (359)
T 2o5v_A 29 TGIYGENGAGKTNLL 43 (359)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCChhHHH
Confidence 347999999998544
No 208
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A*
Probab=22.33 E-value=22 Score=27.07 Aligned_cols=15 Identities=13% Similarity=0.308 Sum_probs=12.5
Q ss_pred cceeeeeccCCCcce
Q psy17338 106 NDLRFVGRSGREAHN 120 (130)
Q Consensus 106 NDLRFVGRSGRGKsF 120 (130)
+-+=|+|.+|.||+-
T Consensus 52 ~~~ll~Gp~G~GKTT 66 (334)
T 1in4_A 52 DHVLLAGPPGLGKTT 66 (334)
T ss_dssp CCEEEESSTTSSHHH
T ss_pred CeEEEECCCCCcHHH
Confidence 457799999999974
No 209
>3llm_A ATP-dependent RNA helicase A; alpha-beta-alpha, structural genomics, structural genomics consortium, SGC, activator, ATP-binding, DNA-binding; HET: ADP; 2.80A {Homo sapiens}
Probab=22.24 E-value=26 Score=24.90 Aligned_cols=15 Identities=13% Similarity=0.164 Sum_probs=12.9
Q ss_pred cceeeeeccCCCcce
Q psy17338 106 NDLRFVGRSGREAHN 120 (130)
Q Consensus 106 NDLRFVGRSGRGKsF 120 (130)
.|+-.+|.+|.||+.
T Consensus 77 ~~~~i~g~TGsGKTt 91 (235)
T 3llm_A 77 SVVIIRGATGCGKTT 91 (235)
T ss_dssp SEEEEECCTTSSHHH
T ss_pred CEEEEEeCCCCCcHH
Confidence 567889999999985
No 210
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426}
Probab=21.92 E-value=23 Score=24.04 Aligned_cols=16 Identities=19% Similarity=0.115 Sum_probs=13.2
Q ss_pred cceeeeeccCCCccee
Q psy17338 106 NDLRFVGRSGREAHNN 121 (130)
Q Consensus 106 NDLRFVGRSGRGKsFt 121 (130)
.-+=+.|-+|.||+.-
T Consensus 55 ~~~~l~G~~GtGKT~l 70 (202)
T 2w58_A 55 KGLYLHGSFGVGKTYL 70 (202)
T ss_dssp CEEEEECSTTSSHHHH
T ss_pred CeEEEECCCCCCHHHH
Confidence 4577899999999864
No 211
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens}
Probab=21.75 E-value=23 Score=26.61 Aligned_cols=15 Identities=13% Similarity=0.098 Sum_probs=12.1
Q ss_pred eeeeeccCCCcceee
Q psy17338 108 LRFVGRSGREAHNNK 122 (130)
Q Consensus 108 LRFVGRSGRGKsFtl 122 (130)
+=++|.+|.||+..+
T Consensus 47 vlL~Gp~GtGKTtLa 61 (274)
T 2x8a_A 47 VLLAGPPGCGKTLLA 61 (274)
T ss_dssp EEEESSTTSCHHHHH
T ss_pred EEEECCCCCcHHHHH
Confidence 558999999998643
No 212
>4dix_A Plectin-related protein; PH domain, IG domain, malonate ION, beta sheet, PH superfold cytosolic, protein binding; 1.70A {Arabidopsis thaliana}
Probab=21.59 E-value=27 Score=28.37 Aligned_cols=48 Identities=19% Similarity=0.343 Sum_probs=39.2
Q ss_pred CCcce---EEEEeeeCCCCeEEEEeecCCCccccccccce-eeeccceeeec
Q psy17338 59 LPVAF---KVVALGDVMDGTIVTIRAGNDENYCGELRNCT-AVMKNQVAKFN 106 (130)
Q Consensus 59 LP~~F---kVvaLg~V~DGT~Vtv~AGNDEn~~aELRN~~-avmknqvA~FN 106 (130)
-|.|| +++...=+|||-.|++.+-+.=++-++|-|.. |.|++.-+-||
T Consensus 68 APeP~DVGrlLqadi~~~G~k~t~~T~gpId~a~GL~~yVEaL~rk~~tEFN 119 (230)
T 4dix_A 68 APEPFDVGRVLHADIIYDGHSLSLSTVGKIDPAAGLGSYVEALVRKHDVDFN 119 (230)
T ss_dssp CCCGGGBTSEEEEEEEETTEEEEEEEEEEBBCCTTHHHHHHHHHTTSEEEEE
T ss_pred cCCccccccEEEEEEecCCcEEEEEecCCCCCCchhHHHHHHHhhcCCCcEE
Confidence 57888 67777778999999999988888999987654 56777777787
No 213
>1hp9_A Kappa-hefutoxin 1; scorpion toxin, gating modifier, voltage-gated potassium channel; NMR {Synthetic} SCOP: j.33.2.1
Probab=21.52 E-value=12 Score=21.48 Aligned_cols=11 Identities=64% Similarity=1.102 Sum_probs=8.8
Q ss_pred eecCCCccccc
Q psy17338 80 RAGNDENYCGE 90 (130)
Q Consensus 80 ~AGNDEn~~aE 90 (130)
++||||.-|.|
T Consensus 10 ~~g~deetck~ 20 (26)
T 1hp9_A 10 REGNDEETCKE 20 (26)
T ss_dssp HHHSCTTHHHH
T ss_pred HccCcHHHHHH
Confidence 47999988765
No 214
>2lc4_A PILP protein; type IV pilus, structural protein; NMR {Pseudomonas aeruginosa}
Probab=21.44 E-value=65 Score=22.92 Aligned_cols=19 Identities=26% Similarity=0.386 Sum_probs=16.1
Q ss_pred EEEEeeeCCCCeEEEEeecC
Q psy17338 64 KVVALGDVMDGTIVTIRAGN 83 (130)
Q Consensus 64 kVvaLg~V~DGT~Vtv~AGN 83 (130)
...||-. |||....|..||
T Consensus 42 ~~~ALV~-~dG~vyrVk~G~ 60 (111)
T 2lc4_A 42 GTFALVK-GAGGVHRVRVGD 60 (111)
T ss_dssp EEEEEEE-ETTEEEEEETTC
T ss_pred eEEEEEE-eCCcEEEEccCC
Confidence 3567778 999999999997
No 215
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=21.37 E-value=24 Score=23.10 Aligned_cols=14 Identities=21% Similarity=0.268 Sum_probs=11.7
Q ss_pred eeeeeccCCCccee
Q psy17338 108 LRFVGRSGREAHNN 121 (130)
Q Consensus 108 LRFVGRSGRGKsFt 121 (130)
+=+.|-+|.||+..
T Consensus 48 ~ll~G~~G~GKT~l 61 (250)
T 1njg_A 48 YLFSGTRGVGKTSI 61 (250)
T ss_dssp EEEECSTTSCHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 56899999999854
No 216
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=21.27 E-value=23 Score=27.40 Aligned_cols=14 Identities=21% Similarity=0.335 Sum_probs=11.4
Q ss_pred eeeeccCCCcceee
Q psy17338 109 RFVGRSGREAHNNK 122 (130)
Q Consensus 109 RFVGRSGRGKsFtl 122 (130)
-++|.+|.|||.++
T Consensus 102 ~i~G~~G~GKTT~~ 115 (297)
T 1j8m_F 102 MLVGVQGTGKTTTA 115 (297)
T ss_dssp EEECSSCSSTTHHH
T ss_pred EEECCCCCCHHHHH
Confidence 37899999999654
No 217
>2y4x_A PILP protein; biosynthetic protein; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 2y4y_A
Probab=21.05 E-value=61 Score=22.14 Aligned_cols=19 Identities=26% Similarity=0.386 Sum_probs=16.2
Q ss_pred EEEEeeeCCCCeEEEEeecC
Q psy17338 64 KVVALGDVMDGTIVTIRAGN 83 (130)
Q Consensus 64 kVvaLg~V~DGT~Vtv~AGN 83 (130)
...||-. |||....|..||
T Consensus 35 ~~~ALV~-~dg~v~~V~~G~ 53 (93)
T 2y4x_A 35 GTFALVK-GAGGVHRVRVGD 53 (93)
T ss_dssp EEEEEEE-ETTEEEEECTTC
T ss_pred eEEEEEE-eCCCEEEEccCC
Confidence 3567878 999999999997
No 218
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=21.03 E-value=25 Score=23.68 Aligned_cols=17 Identities=6% Similarity=0.018 Sum_probs=13.7
Q ss_pred ecceeeeeccCCCccee
Q psy17338 105 FNDLRFVGRSGREAHNN 121 (130)
Q Consensus 105 FNDLRFVGRSGRGKsFt 121 (130)
.+-+=+.|-+|.||+.-
T Consensus 52 ~~~~ll~G~~G~GKT~l 68 (242)
T 3bos_A 52 VQAIYLWGPVKSGRTHL 68 (242)
T ss_dssp CSEEEEECSTTSSHHHH
T ss_pred CCeEEEECCCCCCHHHH
Confidence 45577899999999864
No 219
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=20.98 E-value=26 Score=25.44 Aligned_cols=18 Identities=17% Similarity=0.156 Sum_probs=13.8
Q ss_pred ecceeeeeccCCCcceee
Q psy17338 105 FNDLRFVGRSGREAHNNK 122 (130)
Q Consensus 105 FNDLRFVGRSGRGKsFtl 122 (130)
..-+=+.|.+|.||+.-+
T Consensus 45 ~~~vli~G~~G~GKTtl~ 62 (386)
T 2qby_A 45 PNNIFIYGLTGTGKTAVV 62 (386)
T ss_dssp CCCEEEEECTTSSHHHHH
T ss_pred CCeEEEECCCCCCHHHHH
Confidence 345678999999998643
No 220
>3h2y_A GTPase family protein; GTP-binding protein YQEH, possibly involved in replication initiation, csgid, IDP90222; HET: DGI; 1.80A {Bacillus anthracis str}
Probab=20.97 E-value=26 Score=27.76 Aligned_cols=41 Identities=17% Similarity=0.276 Sum_probs=24.7
Q ss_pred eEEEEeecCCCccccccccceeeeccceeeecceeeeeccCCCcce
Q psy17338 75 TIVTIRAGNDENYCGELRNCTAVMKNQVAKFNDLRFVGRSGREAHN 120 (130)
Q Consensus 75 T~Vtv~AGNDEn~~aELRN~~avmknqvA~FNDLRFVGRSGRGKsF 120 (130)
..+.++|-+.++. .||++....+... .+.=+||++|.|||=
T Consensus 135 ~v~~iSA~~g~gi-~~L~~~l~~~~~~----~~i~~vG~~nvGKSt 175 (368)
T 3h2y_A 135 DVFLISAAKGQGI-AELADAIEYYRGG----KDVYVVGCTNVGKST 175 (368)
T ss_dssp EEEECCTTTCTTH-HHHHHHHHHHHTT----SCEEEEEBTTSSHHH
T ss_pred cEEEEeCCCCcCH-HHHHhhhhhhccc----ceEEEecCCCCChhH
Confidence 3556677666653 3555443322221 356699999999983
No 221
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=20.91 E-value=26 Score=26.34 Aligned_cols=13 Identities=31% Similarity=0.445 Sum_probs=10.6
Q ss_pred eeeeeccCCCcce
Q psy17338 108 LRFVGRSGREAHN 120 (130)
Q Consensus 108 LRFVGRSGRGKsF 120 (130)
+=+.|-+|+|||-
T Consensus 78 I~I~G~~GSGKST 90 (281)
T 2f6r_A 78 LGLTGISGSGKSS 90 (281)
T ss_dssp EEEEECTTSCHHH
T ss_pred EEEECCCCCCHHH
Confidence 4578999999983
No 222
>3ec1_A YQEH GTPase; atnos1, atnoa1, trap, PVHL, hydrolase, signaling protein; HET: GDP; 2.36A {Geobacillus stearothermophilus}
Probab=20.69 E-value=25 Score=27.77 Aligned_cols=39 Identities=10% Similarity=0.175 Sum_probs=22.3
Q ss_pred EEEEeecCCCccccccccceeeeccceeeecceeeeeccCCCcc
Q psy17338 76 IVTIRAGNDENYCGELRNCTAVMKNQVAKFNDLRFVGRSGREAH 119 (130)
Q Consensus 76 ~Vtv~AGNDEn~~aELRN~~avmknqvA~FNDLRFVGRSGRGKs 119 (130)
.+.++|-+.++. .||.+....+..+ .+.=+||++|.|||
T Consensus 138 v~~iSA~~g~gi-~~L~~~I~~~~~~----~~i~~vG~~nvGKS 176 (369)
T 3ec1_A 138 VCLVSAAKGIGM-AKVMEAINRYREG----GDVYVVGCTNVGKS 176 (369)
T ss_dssp EEECBTTTTBTH-HHHHHHHHHHHTT----SCEEEECCTTSSHH
T ss_pred EEEEECCCCCCH-HHHHHHHHhhccc----CcEEEEcCCCCchH
Confidence 455666665543 3343332222111 25679999999998
No 223
>4f9l_D 20.1 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; HET: NAG; 3.14A {Mus musculus}
Probab=20.60 E-value=16 Score=29.46 Aligned_cols=19 Identities=32% Similarity=0.387 Sum_probs=14.5
Q ss_pred eeeeccCCCcceeeCCCCcc
Q psy17338 109 RFVGRSGREAHNNKAPDSYD 128 (130)
Q Consensus 109 RFVGRSGRGKsFtls~~~~~ 128 (130)
||-| ||.|..|+|.|.+..
T Consensus 61 RFSg-S~Sgt~ftLtIs~lq 79 (259)
T 4f9l_D 61 RFSG-SGSATGFTLTISSLQ 79 (259)
T ss_dssp TEEE-EEETTEEEEEEESCC
T ss_pred CEEe-eccCCeEEEEEcccC
Confidence 6665 788999999887654
No 224
>2obl_A ESCN; ATPase, hydrolase; 1.80A {Escherichia coli O127} PDB: 2obm_A*
Probab=20.56 E-value=26 Score=27.79 Aligned_cols=14 Identities=14% Similarity=0.012 Sum_probs=11.0
Q ss_pred eeeeccCCCcceee
Q psy17338 109 RFVGRSGREAHNNK 122 (130)
Q Consensus 109 RFVGRSGRGKsFtl 122 (130)
=++|.||.|||=.|
T Consensus 75 gIiG~nGaGKTTLl 88 (347)
T 2obl_A 75 GIFAGSGVGKSTLL 88 (347)
T ss_dssp EEEECTTSSHHHHH
T ss_pred EEECCCCCCHHHHH
Confidence 36899999998543
No 225
>3qkt_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATP binding, DNA bindi MRE11, replication; HET: DNA ANP; 1.90A {Pyrococcus furiosus} PDB: 3qku_A* 1ii8_A 3qks_B* 3qkr_B* 1ii8_B
Probab=20.42 E-value=26 Score=26.90 Aligned_cols=14 Identities=14% Similarity=0.325 Sum_probs=11.4
Q ss_pred eeeccCCCcceeeC
Q psy17338 110 FVGRSGREAHNNKA 123 (130)
Q Consensus 110 FVGRSGRGKsFtls 123 (130)
++|.+|.|||--|.
T Consensus 28 i~G~NGsGKS~lle 41 (339)
T 3qkt_A 28 IIGQNGSGKSSLLD 41 (339)
T ss_dssp EECCTTSSHHHHHH
T ss_pred EECCCCCCHHHHHH
Confidence 79999999985443
No 226
>1j6q_A Cytochrome C maturation protein E; all-beta protein, heme delivery,cytochrome C maturation, OB- (oligonucleotide binding)fold; NMR {Shewanella putrefaciens} SCOP: b.40.9.1 PDB: 1lm0_A
Probab=20.37 E-value=1.1e+02 Score=22.35 Aligned_cols=34 Identities=38% Similarity=0.595 Sum_probs=22.5
Q ss_pred CCCCCcce----EEEEeeeC-CCCeEE--EEeecCCCcccc
Q psy17338 56 NKTLPVAF----KVVALGDV-MDGTIV--TIRAGNDENYCG 89 (130)
Q Consensus 56 NKtLP~~F----kVvaLg~V-~DGT~V--tv~AGNDEn~~a 89 (130)
+-.||..| -||+-|.. +||+.+ .|.|.-||||..
T Consensus 72 ~GilPDlFrEGqgVVa~G~l~~~g~F~A~eVLaKhdekY~p 112 (136)
T 1j6q_A 72 DDLLPDLFREGQGIVAQGVLGEDGKLAATEVLAKHDENYMP 112 (136)
T ss_dssp CSCCTTSCCSSSEEEEEEEECSTTSEEEEEEECCC------
T ss_pred CCCCCccccCCCeEEEEEEECCCCeEEEEEEEecCCCCCCC
Confidence 45778888 59999987 489875 699999999975
No 227
>2vt8_A HPI31, PI31, proteasome inhibitor PI31 subunit; polymorphism, hydrolase inhibitor; 2.6A {Homo sapiens}
Probab=20.35 E-value=1.1e+02 Score=21.66 Aligned_cols=12 Identities=42% Similarity=0.971 Sum_probs=9.8
Q ss_pred eecCCCccccCC
Q psy17338 46 CTVLPTHWRSNK 57 (130)
Q Consensus 46 Cs~LP~HWRsNK 57 (130)
+-.||.+|.+|+
T Consensus 53 se~LP~~WN~~~ 64 (153)
T 2vt8_A 53 SELLPAGWNNNK 64 (153)
T ss_dssp BSSCCTTTTSCS
T ss_pred ccCCCHHHcCCC
Confidence 467999999873
No 228
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=20.14 E-value=19 Score=28.21 Aligned_cols=15 Identities=20% Similarity=0.344 Sum_probs=12.3
Q ss_pred eeeeeccCCCcceee
Q psy17338 108 LRFVGRSGREAHNNK 122 (130)
Q Consensus 108 LRFVGRSGRGKsFtl 122 (130)
+-++|.+|.|||.++
T Consensus 108 I~ivG~~G~GKTT~~ 122 (320)
T 1zu4_A 108 FMLVGVNGTGKTTSL 122 (320)
T ss_dssp EEEESSTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 447899999999765
Done!