Query psy17341
Match_columns 232
No_of_seqs 133 out of 281
Neff 4.7
Searched_HMMs 29240
Date Fri Aug 16 19:48:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17341.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17341hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l9k_W Dynein intermediate cha 99.4 1.2E-13 4E-18 90.6 4.3 38 62-99 1-38 (38)
2 4e54_B DNA damage-binding prot 98.0 5.6E-06 1.9E-10 73.7 5.3 61 162-232 118-180 (435)
3 4aow_A Guanine nucleotide-bind 97.1 0.00095 3.3E-08 55.2 6.6 59 164-231 39-101 (340)
4 2xyi_A Probable histone-bindin 96.9 0.0028 9.5E-08 56.2 8.4 60 162-231 276-336 (430)
5 2aq5_A Coronin-1A; WD40 repeat 96.9 0.0027 9.3E-08 55.1 7.8 60 163-231 81-146 (402)
6 2xyi_A Probable histone-bindin 96.8 0.0034 1.2E-07 55.6 8.1 61 162-231 230-292 (430)
7 3i2n_A WD repeat-containing pr 96.8 0.002 6.9E-08 53.4 6.1 61 162-228 17-77 (357)
8 4aez_A CDC20, WD repeat-contai 96.7 0.0031 1.1E-07 54.9 7.3 61 162-231 258-318 (401)
9 4a11_B DNA excision repair pro 96.7 0.0039 1.3E-07 52.5 7.6 59 162-231 42-114 (408)
10 4g56_B MGC81050 protein; prote 96.7 0.0018 6.3E-08 56.3 5.5 59 162-231 268-326 (357)
11 4ggc_A P55CDC, cell division c 96.6 0.0036 1.2E-07 51.2 6.4 52 166-231 28-82 (318)
12 2pm9_A Protein WEB1, protein t 96.5 0.0022 7.4E-08 54.7 4.6 66 165-231 14-82 (416)
13 3ei3_B DNA damage-binding prot 96.4 0.0052 1.8E-07 52.5 6.4 57 163-230 73-132 (383)
14 4gqb_B Methylosome protein 50; 96.4 0.011 3.7E-07 51.7 8.5 59 162-231 213-272 (344)
15 2ynn_A Coatomer subunit beta'; 96.4 0.0038 1.3E-07 52.6 5.2 58 163-231 97-155 (304)
16 2pm9_A Protein WEB1, protein t 96.3 0.0065 2.2E-07 51.7 6.4 62 163-231 214-277 (416)
17 3k26_A Polycomb protein EED; W 96.2 0.0089 3E-07 49.5 6.5 59 162-231 114-176 (366)
18 4g56_B MGC81050 protein; prote 96.2 0.0073 2.5E-07 52.5 6.3 58 163-231 226-284 (357)
19 4gqb_B Methylosome protein 50; 96.2 0.0074 2.5E-07 52.8 6.1 58 163-232 257-315 (344)
20 3mmy_A MRNA export factor; mRN 96.1 0.012 4.1E-07 48.6 6.9 61 162-231 38-101 (368)
21 4gq1_A NUP37; propeller, trans 96.1 0.0025 8.5E-08 56.1 2.6 59 164-231 137-201 (393)
22 3k26_A Polycomb protein EED; W 96.1 0.014 4.8E-07 48.3 7.0 59 162-231 68-130 (366)
23 3ei3_B DNA damage-binding prot 96.0 0.012 4E-07 50.3 6.6 59 163-230 204-264 (383)
24 4gga_A P55CDC, cell division c 96.0 0.014 4.9E-07 51.2 7.3 61 162-231 275-335 (420)
25 4a11_B DNA excision repair pro 96.0 0.017 5.9E-07 48.5 7.2 60 162-231 185-260 (408)
26 3f3f_A Nucleoporin SEH1; struc 96.0 0.012 4.1E-07 47.6 6.0 55 163-227 11-68 (351)
27 3gre_A Serine/threonine-protei 95.9 0.01 3.6E-07 51.5 5.7 59 163-230 63-125 (437)
28 2xzm_R RACK1; ribosome, transl 95.8 0.027 9.2E-07 48.0 8.0 56 163-229 213-268 (343)
29 3jrp_A Fusion protein of prote 95.8 0.03 1E-06 46.5 8.0 57 162-227 100-158 (379)
30 4ggc_A P55CDC, cell division c 95.8 0.018 6.1E-07 46.9 6.5 61 161-231 238-299 (318)
31 3lrv_A PRE-mRNA-splicing facto 95.8 0.017 5.7E-07 49.2 6.6 58 163-231 170-229 (343)
32 1r5m_A SIR4-interacting protei 95.8 0.011 3.9E-07 49.7 5.3 60 162-231 44-123 (425)
33 3zwl_B Eukaryotic translation 95.8 0.022 7.4E-07 47.0 6.9 57 163-231 74-130 (369)
34 3dw8_B Serine/threonine-protei 95.7 0.026 8.8E-07 48.6 7.4 60 163-231 226-300 (447)
35 3dw8_B Serine/threonine-protei 95.7 0.016 5.4E-07 50.0 6.0 57 161-228 26-105 (447)
36 2oit_A Nucleoporin 214KDA; NH2 95.7 0.0095 3.3E-07 54.1 4.8 57 163-230 149-206 (434)
37 3f3f_A Nucleoporin SEH1; struc 95.6 0.014 4.7E-07 47.2 5.2 58 162-228 56-122 (351)
38 3mmy_A MRNA export factor; mRN 95.6 0.02 6.7E-07 47.3 6.1 55 165-231 275-330 (368)
39 1sq9_A Antiviral protein SKI8; 95.5 0.025 8.5E-07 47.9 6.5 57 162-231 185-248 (397)
40 3i2n_A WD repeat-containing pr 95.5 0.019 6.6E-07 47.4 5.7 61 161-231 257-336 (357)
41 3vl1_A 26S proteasome regulato 95.5 0.034 1.2E-06 47.6 7.3 58 162-231 138-196 (420)
42 1sq9_A Antiviral protein SKI8; 95.5 0.016 5.6E-07 49.0 5.3 53 162-227 15-73 (397)
43 3zwl_B Eukaryotic translation 95.3 0.043 1.5E-06 45.2 7.2 58 162-231 217-274 (369)
44 4e54_B DNA damage-binding prot 95.3 0.012 4.1E-07 52.1 3.9 60 163-231 250-311 (435)
45 2ynn_A Coatomer subunit beta'; 95.3 0.02 6.9E-07 48.1 5.1 55 164-230 14-69 (304)
46 2aq5_A Coronin-1A; WD40 repeat 95.2 0.034 1.2E-06 48.1 6.6 59 162-231 130-191 (402)
47 3frx_A Guanine nucleotide-bind 95.2 0.038 1.3E-06 46.8 6.8 56 163-230 196-251 (319)
48 4gga_A P55CDC, cell division c 95.2 0.036 1.2E-06 48.6 6.6 61 161-231 318-379 (420)
49 2oit_A Nucleoporin 214KDA; NH2 95.2 0.016 5.4E-07 52.6 4.4 64 163-232 92-165 (434)
50 3jrp_A Fusion protein of prote 95.1 0.055 1.9E-06 44.9 7.2 59 163-231 206-271 (379)
51 3iz6_a 40S ribosomal protein R 95.1 0.04 1.4E-06 47.9 6.5 59 163-231 205-264 (380)
52 1vyh_C Platelet-activating fac 95.1 0.045 1.5E-06 48.3 6.9 57 163-231 108-165 (410)
53 1yfq_A Cell cycle arrest prote 95.0 0.066 2.3E-06 44.1 7.4 61 162-231 192-266 (342)
54 1gxr_A ESG1, transducin-like e 95.0 0.052 1.8E-06 44.2 6.6 57 163-231 183-239 (337)
55 4aez_A CDC20, WD repeat-contai 95.0 0.037 1.3E-06 48.1 6.0 58 163-232 217-275 (401)
56 4h5i_A Guanine nucleotide-exch 95.0 0.036 1.2E-06 48.3 5.9 58 162-231 268-327 (365)
57 2xzm_R RACK1; ribosome, transl 94.9 0.045 1.5E-06 46.6 6.3 57 163-231 76-133 (343)
58 1pgu_A Actin interacting prote 94.9 0.039 1.3E-06 49.4 6.1 58 162-229 530-597 (615)
59 1vyh_C Platelet-activating fac 94.8 0.081 2.8E-06 46.6 7.8 57 164-232 339-396 (410)
60 1gxr_A ESG1, transducin-like e 94.8 0.077 2.6E-06 43.2 7.1 58 162-231 264-321 (337)
61 1erj_A Transcriptional repress 94.8 0.054 1.8E-06 47.3 6.6 57 163-231 165-221 (393)
62 3odt_A Protein DOA1; ubiquitin 94.6 0.099 3.4E-06 42.2 7.4 55 162-229 224-279 (313)
63 4aow_A Guanine nucleotide-bind 94.6 0.074 2.5E-06 43.6 6.8 54 163-228 215-268 (340)
64 3vu4_A KMHSV2; beta-propeller 94.6 0.06 2E-06 46.5 6.4 57 163-231 195-255 (355)
65 4ery_A WD repeat-containing pr 94.6 0.055 1.9E-06 44.8 5.8 58 162-231 22-80 (312)
66 4ery_A WD repeat-containing pr 94.5 0.076 2.6E-06 43.9 6.6 57 163-231 65-122 (312)
67 4h5i_A Guanine nucleotide-exch 94.5 0.056 1.9E-06 47.1 6.1 56 165-230 135-190 (365)
68 3bg1_A Protein SEC13 homolog; 94.5 0.12 4.2E-06 43.6 8.0 59 164-231 213-277 (316)
69 1got_B GT-beta; complex (GTP-b 94.5 0.073 2.5E-06 45.3 6.6 57 163-231 55-112 (340)
70 3odt_A Protein DOA1; ubiquitin 94.4 0.04 1.4E-06 44.6 4.6 57 163-231 18-74 (313)
71 2oaj_A Protein SNI1; WD40 repe 94.4 0.027 9.3E-07 56.2 4.2 56 163-230 151-225 (902)
72 3fm0_A Protein CIAO1; WDR39,SG 94.4 0.096 3.3E-06 44.8 7.2 61 162-232 251-319 (345)
73 1yfq_A Cell cycle arrest prote 94.4 0.035 1.2E-06 45.8 4.2 57 162-229 10-69 (342)
74 2pm7_B Protein transport prote 94.4 0.09 3.1E-06 43.9 6.7 59 163-231 204-269 (297)
75 2j04_B YDR362CP, TAU91; beta p 94.3 0.097 3.3E-06 49.2 7.6 56 164-231 267-325 (524)
76 3dm0_A Maltose-binding peripla 94.2 0.11 3.8E-06 48.8 7.8 60 163-231 382-445 (694)
77 3mkq_A Coatomer beta'-subunit; 94.1 0.056 1.9E-06 50.7 5.4 58 162-231 12-70 (814)
78 3vl1_A 26S proteasome regulato 94.0 0.22 7.4E-06 42.5 8.5 54 163-226 290-345 (420)
79 2vdu_B TRNA (guanine-N(7)-)-me 94.0 0.11 3.8E-06 45.9 6.9 58 165-231 104-164 (450)
80 2hes_X YDR267CP; beta-propelle 93.9 0.077 2.6E-06 45.1 5.6 60 162-231 57-122 (330)
81 3dwl_C Actin-related protein 2 93.9 0.1 3.6E-06 43.9 6.3 59 163-231 55-115 (377)
82 3ow8_A WD repeat-containing pr 93.9 0.07 2.4E-06 45.5 5.3 57 163-231 248-305 (321)
83 3iz6_a 40S ribosomal protein R 93.9 0.052 1.8E-06 47.2 4.5 56 163-230 66-122 (380)
84 2ymu_A WD-40 repeat protein; u 93.8 0.14 4.7E-06 45.9 7.3 55 164-231 17-72 (577)
85 3ow8_A WD repeat-containing pr 93.8 0.069 2.3E-06 45.6 5.1 57 163-231 206-263 (321)
86 2pm7_B Protein transport prote 93.8 0.12 4.1E-06 43.1 6.4 56 163-227 53-110 (297)
87 2pbi_B Guanine nucleotide-bind 93.8 0.095 3.3E-06 45.2 5.9 55 163-229 64-119 (354)
88 2j04_B YDR362CP, TAU91; beta p 93.7 0.096 3.3E-06 49.2 6.3 56 165-232 357-413 (524)
89 3mkq_A Coatomer beta'-subunit; 93.7 0.067 2.3E-06 50.2 5.1 58 162-231 54-112 (814)
90 1got_B GT-beta; complex (GTP-b 93.6 0.12 4.2E-06 43.9 6.3 55 165-231 272-327 (340)
91 3fm0_A Protein CIAO1; WDR39,SG 93.4 0.087 3E-06 45.1 5.0 59 162-230 60-119 (345)
92 2pbi_B Guanine nucleotide-bind 93.4 0.18 6.3E-06 43.4 7.1 58 163-231 196-255 (354)
93 1r5m_A SIR4-interacting protei 93.3 0.14 4.7E-06 43.0 6.0 57 162-231 288-345 (425)
94 3dwl_C Actin-related protein 2 93.3 0.14 4.7E-06 43.2 6.0 58 162-230 99-160 (377)
95 1k8k_C P40, ARP2/3 complex 41 93.3 0.12 4.1E-06 42.9 5.5 55 163-229 202-257 (372)
96 1k8k_C P40, ARP2/3 complex 41 93.2 0.07 2.4E-06 44.4 4.0 59 163-231 8-67 (372)
97 3bg1_A Protein SEC13 homolog; 93.2 0.15 5.3E-06 42.9 6.2 57 163-228 57-115 (316)
98 2hes_X YDR267CP; beta-propelle 93.2 0.15 5.3E-06 43.2 6.2 59 163-231 107-168 (330)
99 3frx_A Guanine nucleotide-bind 93.2 0.13 4.5E-06 43.5 5.7 57 163-231 65-122 (319)
100 1pgu_A Actin interacting prote 93.1 0.14 4.8E-06 45.7 6.1 55 161-226 16-74 (615)
101 1erj_A Transcriptional repress 93.1 0.15 5.3E-06 44.3 6.1 56 164-231 124-180 (393)
102 2ymu_A WD-40 repeat protein; u 92.9 0.17 5.8E-06 45.3 6.3 55 164-231 58-113 (577)
103 3lrv_A PRE-mRNA-splicing facto 92.9 0.15 5.2E-06 43.2 5.7 56 164-230 126-184 (343)
104 3jro_A Fusion protein of prote 92.6 0.26 9E-06 47.4 7.5 57 162-227 98-156 (753)
105 3dm0_A Maltose-binding peripla 92.4 0.18 6.2E-06 47.4 6.0 57 163-231 430-487 (694)
106 1nr0_A Actin interacting prote 91.3 0.29 1E-05 45.5 6.0 56 163-228 536-593 (611)
107 1l0q_A Surface layer protein; 91.2 0.39 1.3E-05 40.6 6.3 58 163-231 31-88 (391)
108 1nr0_A Actin interacting prote 91.1 0.29 1E-05 45.5 5.8 59 162-231 146-205 (611)
109 4gq1_A NUP37; propeller, trans 90.9 0.54 1.8E-05 41.0 7.1 56 166-230 318-373 (393)
110 2vdu_B TRNA (guanine-N(7)-)-me 90.8 0.36 1.2E-05 42.5 5.9 56 162-227 148-206 (450)
111 3gre_A Serine/threonine-protei 90.7 0.2 6.8E-06 43.4 4.1 67 163-231 154-229 (437)
112 2oaj_A Protein SNI1; WD40 repe 90.6 0.38 1.3E-05 47.9 6.5 56 163-231 58-113 (902)
113 3jro_A Fusion protein of prote 90.4 0.24 8.2E-06 47.7 4.8 56 163-227 53-110 (753)
114 1l0q_A Surface layer protein; 90.3 0.55 1.9E-05 39.7 6.4 59 162-231 114-172 (391)
115 3sfz_A APAF-1, apoptotic pepti 90.3 0.37 1.3E-05 48.0 6.0 60 162-231 698-758 (1249)
116 3v7d_B Cell division control p 90.2 0.5 1.7E-05 41.1 6.2 53 162-227 161-214 (464)
117 3bws_A Protein LP49; two-domai 90.1 0.6 2E-05 40.0 6.5 65 163-231 253-317 (433)
118 3sfz_A APAF-1, apoptotic pepti 89.7 0.54 1.8E-05 46.8 6.7 57 163-231 615-672 (1249)
119 3bws_A Protein LP49; two-domai 88.7 1.3 4.3E-05 38.0 7.6 68 162-231 343-415 (433)
120 2j04_A TAU60, YPL007P, hypothe 87.2 1.8 6.1E-05 42.4 8.4 56 163-228 129-194 (588)
121 2ojh_A Uncharacterized protein 86.1 0.54 1.9E-05 37.0 3.4 57 163-231 41-99 (297)
122 2hqs_A Protein TOLB; TOLB, PAL 85.8 1.8 6.2E-05 38.3 7.0 59 164-231 179-237 (415)
123 3v7d_B Cell division control p 84.7 1.5 5.2E-05 38.0 5.9 52 163-226 310-362 (464)
124 2ovr_B FBW7, F-BOX/WD repeat p 84.4 2.3 7.9E-05 37.0 7.0 54 162-229 361-420 (445)
125 3vu4_A KMHSV2; beta-propeller 84.1 1.4 4.9E-05 37.7 5.4 33 163-205 240-272 (355)
126 2ojh_A Uncharacterized protein 80.6 3 0.0001 32.6 5.7 61 162-231 127-187 (297)
127 2z3z_A Dipeptidyl aminopeptida 80.5 1.3 4.4E-05 41.2 4.0 53 164-230 82-134 (706)
128 1ri6_A Putative isomerase YBHE 79.3 1.8 6E-05 35.2 4.0 61 162-231 36-98 (343)
129 1p22_A F-BOX/WD-repeat protein 78.6 3.7 0.00013 35.7 6.2 50 163-226 173-223 (435)
130 1ri6_A Putative isomerase YBHE 77.9 2.7 9.3E-05 34.1 4.8 60 163-231 230-291 (343)
131 2ovr_B FBW7, F-BOX/WD repeat p 72.0 5.3 0.00018 34.6 5.4 49 163-225 159-208 (445)
132 1jmx_B Amine dehydrogenase; ox 71.4 7.8 0.00027 31.5 6.0 54 164-230 255-308 (349)
133 1p22_A F-BOX/WD-repeat protein 69.7 7.4 0.00025 33.8 5.8 49 163-225 133-182 (435)
134 2j04_A TAU60, YPL007P, hypothe 66.1 5.9 0.0002 38.8 4.8 49 164-225 183-235 (588)
135 2hqs_A Protein TOLB; TOLB, PAL 65.7 10 0.00036 33.3 6.0 59 164-231 223-281 (415)
136 3u4y_A Uncharacterized protein 60.5 17 0.00058 29.5 6.0 57 162-229 174-233 (331)
137 1pby_B Quinohemoprotein amine 58.0 13 0.00045 29.8 4.8 51 165-229 242-292 (337)
138 1jmx_B Amine dehydrogenase; ox 57.4 9.5 0.00033 30.9 3.9 66 163-228 91-159 (349)
139 1xip_A Nucleoporin NUP159; bet 57.4 14 0.00047 33.8 5.3 46 165-227 128-173 (388)
140 1pby_B Quinohemoprotein amine 56.3 11 0.00037 30.3 4.0 64 165-230 83-148 (337)
141 1xip_A Nucleoporin NUP159; bet 55.3 6 0.00021 36.2 2.6 54 164-229 163-226 (388)
142 3vgz_A Uncharacterized protein 54.6 13 0.00046 30.2 4.4 62 163-229 40-101 (353)
143 3scy_A Hypothetical bacterial 54.5 22 0.00074 29.6 5.7 56 165-230 156-224 (361)
144 2ecf_A Dipeptidyl peptidase IV 54.5 12 0.0004 34.8 4.4 54 165-230 110-165 (741)
145 3hfq_A Uncharacterized protein 47.4 31 0.0011 28.4 5.5 56 163-228 85-152 (347)
146 3u4y_A Uncharacterized protein 45.0 36 0.0012 27.5 5.5 57 163-230 40-97 (331)
147 1nir_A Nitrite reductase; hemo 43.9 58 0.002 30.1 7.4 58 163-231 221-294 (543)
148 1xfd_A DIP, dipeptidyl aminope 43.8 31 0.0011 31.7 5.5 61 165-229 62-126 (723)
149 3vgz_A Uncharacterized protein 43.1 25 0.00086 28.5 4.3 55 165-229 142-197 (353)
150 2ecf_A Dipeptidyl peptidase IV 42.0 18 0.00062 33.5 3.6 63 162-230 35-122 (741)
151 3hfq_A Uncharacterized protein 41.0 34 0.0012 28.2 4.8 56 164-229 240-298 (347)
152 2w18_A PALB2, fancn, partner a 39.9 45 0.0015 30.5 5.8 33 193-227 201-237 (356)
153 2w18_A PALB2, fancn, partner a 39.6 18 0.0006 33.2 3.1 37 193-231 303-341 (356)
154 1xfd_A DIP, dipeptidyl aminope 39.3 56 0.0019 30.0 6.4 61 166-228 175-266 (723)
155 4fxe_A Antitoxin RELB; toxin/a 38.3 15 0.00051 26.7 1.9 23 3-25 9-31 (79)
156 3cuq_A Vacuolar-sorting protei 37.2 16 0.00054 31.8 2.2 21 3-23 37-57 (234)
157 2gop_A Trilobed protease; beta 36.2 52 0.0018 26.8 5.2 59 164-230 59-117 (347)
158 1u5t_A Appears to BE functiona 35.1 15 0.0005 32.0 1.6 21 3-23 57-77 (233)
159 1k32_A Tricorn protease; prote 33.4 73 0.0025 31.5 6.6 52 162-228 13-64 (1045)
160 2z3z_A Dipeptidyl aminopeptida 31.6 47 0.0016 30.5 4.6 63 166-230 183-271 (706)
161 3scy_A Hypothetical bacterial 29.5 87 0.003 25.8 5.6 57 165-229 260-318 (361)
162 3azo_A Aminopeptidase; POP fam 28.0 34 0.0012 31.2 2.9 67 163-229 129-200 (662)
163 1k32_A Tricorn protease; prote 27.6 65 0.0022 31.9 5.1 64 164-230 421-485 (1045)
164 1nir_A Nitrite reductase; hemo 27.4 93 0.0032 28.7 5.9 50 165-226 180-231 (543)
165 4a5s_A Dipeptidyl peptidase 4 24.4 69 0.0024 30.2 4.4 60 167-229 65-124 (740)
166 1jof_A Carboxy-CIS,CIS-muconat 24.3 93 0.0032 26.2 4.9 57 165-226 255-316 (365)
167 1z68_A Fibroblast activation p 23.8 57 0.0019 30.1 3.6 61 165-229 61-122 (719)
168 2gop_A Trilobed protease; beta 21.3 1.2E+02 0.0042 24.5 4.9 60 166-228 106-182 (347)
169 1jof_A Carboxy-CIS,CIS-muconat 20.6 1.9E+02 0.0065 24.1 6.1 59 163-230 144-206 (365)
No 1
>3l9k_W Dynein intermediate chain, cytosolic; LC7, light chain 7, KM23, RO hydrolase, alternative splicing, lysosome, membrane; 3.00A {Drosophila melanogaster}
Probab=99.42 E-value=1.2e-13 Score=90.64 Aligned_cols=38 Identities=58% Similarity=0.899 Sum_probs=36.6
Q ss_pred cCHHHHHhhccChhHHHHHHHHHHHHHHHhccCcchhc
Q psy17341 62 LSEDEKLKITLSEEFQHFVARTGRVMERLLAEKSDMYK 99 (232)
Q Consensus 62 Ls~Eek~~i~~S~~f~~F~~raski~ERaL~qn~Dif~ 99 (232)
||+|||++|+.|++|.+||+|++|||||||++++|||.
T Consensus 1 LseEEk~~I~~S~~F~~F~~rsskviERAL~e~yDi~~ 38 (38)
T 3l9k_W 1 LSEEQKQMIILSENFQRFVVRAGRVIERALSENVDIYT 38 (38)
T ss_dssp CCHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred CCHHHHHHHhcCHHHHHHHHHHHHHHHHHHcccccccC
Confidence 79999999999999999999999999999999999974
No 2
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.99 E-value=5.6e-06 Score=73.67 Aligned_cols=61 Identities=20% Similarity=0.336 Sum_probs=47.2
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceE-Ee-CCCCeEEEEecCCCCcCC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFE-FF-CQSPVLSCCFAKFFFLYA 232 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyv-f~-~~S~V~~v~FsP~hPnLI 232 (232)
-.+.||||+|||..+.|||++- .+|.|.||++... ..+..+ +. -...|+|++|+|.++++|
T Consensus 118 ~~~~V~~l~~~P~~~~~lasGs---------~dg~i~lWd~~~~-~~~~~~~~~gH~~~V~~l~f~p~~~~~l 180 (435)
T 4e54_B 118 FDRRATSLAWHPTHPSTVAVGS---------KGGDIMLWNFGIK-DKPTFIKGIGAGGSITGLKFNPLNTNQF 180 (435)
T ss_dssp CSSCEEEEEECSSCTTCEEEEE---------TTSCEEEECSSCC-SCCEEECCCSSSCCCCEEEECSSCTTEE
T ss_pred CCCCEEEEEEeCCCCCEEEEEe---------CCCEEEEEECCCC-CceeEEEccCCCCCEEEEEEeCCCCCEE
Confidence 3567999999999999998873 4699999999876 444333 33 256899999999888753
No 3
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.09 E-value=0.00095 Score=55.16 Aligned_cols=59 Identities=15% Similarity=0.188 Sum_probs=44.7
Q ss_pred cceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCC---CCCceEEeC-CCCeEEEEecCCCCcC
Q psy17341 164 RNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKK---TTPEFEFFC-QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 164 R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk---~~PEyvf~~-~S~V~~v~FsP~hPnL 231 (232)
..|++|+|+|..+.+||.+ ..||.|.||++...+ ..|...+.. ...|.+++|+|....|
T Consensus 39 ~~V~~v~~sp~~~~~l~S~---------s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l 101 (340)
T 4aow_A 39 GWVTQIATTPQFPDMILSA---------SRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFA 101 (340)
T ss_dssp SCEEEEEECTTCTTEEEEE---------ETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CCEEEEEEeCCCCCEEEEE---------cCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEE
Confidence 4899999999999988765 136899999987641 224555655 4699999999976544
No 4
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=96.91 E-value=0.0028 Score=56.23 Aligned_cols=60 Identities=8% Similarity=0.154 Sum_probs=50.0
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCCCCcC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~hPnL 231 (232)
....|++|+|+|..+.++|++. .+|.|.||++... ..|-..+.. ...|.+++|+|..+++
T Consensus 276 ~~~~v~~i~~~p~~~~~l~tg~---------~dg~v~vwd~~~~-~~~~~~~~~h~~~v~~i~~sp~~~~~ 336 (430)
T 2xyi_A 276 HTAEVNCLSFNPYSEFILATGS---------ADKTVALWDLRNL-KLKLHSFESHKDEIFQVQWSPHNETI 336 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEE---------TTSEEEEEETTCT-TSCSEEEECCSSCEEEEEECSSCTTE
T ss_pred CCCCeEEEEeCCCCCCEEEEEe---------CCCeEEEEeCCCC-CCCeEEeecCCCCEEEEEECCCCCCE
Confidence 3467999999999888887763 3689999999997 678888885 5699999999998764
No 5
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.87 E-value=0.0027 Score=55.06 Aligned_cols=60 Identities=10% Similarity=0.141 Sum_probs=47.7
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCC-----CCceEEeC-CCCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKT-----TPEFEFFC-QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~-----~PEyvf~~-~S~V~~v~FsP~hPnL 231 (232)
...|++|+|+|....+||++. .+|.|.||++..... .|...+.. ...|.+++|+|..+++
T Consensus 81 ~~~V~~~~~~p~~~~~l~s~s---------~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 146 (402)
T 2aq5_A 81 TAPVLDIAWCPHNDNVIASGS---------EDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNV 146 (402)
T ss_dssp SSCEEEEEECTTCTTEEEEEE---------TTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTE
T ss_pred CCCEEEEEeCCCCCCEEEEEe---------CCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCE
Confidence 458999999998788888763 358999999988511 57777775 4699999999997654
No 6
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=96.81 E-value=0.0034 Score=55.63 Aligned_cols=61 Identities=18% Similarity=0.296 Sum_probs=48.7
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCC-CCCceEEeC-CCCeEEEEecCCCCcC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKK-TTPEFEFFC-QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk-~~PEyvf~~-~S~V~~v~FsP~hPnL 231 (232)
....|++|+|+|....+||++. .+|.|.||++...+ ..|...+.. .++|.|++|+|..+++
T Consensus 230 h~~~v~~v~~~p~~~~~l~s~~---------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~ 292 (430)
T 2xyi_A 230 HTAVVEDVAWHLLHESLFGSVA---------DDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFI 292 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEE---------TTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTE
T ss_pred CCCCEeeeEEeCCCCCEEEEEe---------CCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCE
Confidence 3457999999999888988764 35899999999751 257777755 5799999999998874
No 7
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.79 E-value=0.002 Score=53.38 Aligned_cols=61 Identities=13% Similarity=0.113 Sum_probs=46.0
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFF 228 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~h 228 (232)
-...|++|+|+|..+.|++++-.. ..+|.|.||++...+..+...+....+|.|++|+|..
T Consensus 17 h~~~v~~~~~~p~~~~l~~~~s~~------~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 77 (357)
T 3i2n_A 17 FNYTVFDCKWVPCSAKFVTMGNFA------RGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATS 77 (357)
T ss_dssp CSSCEEEEEECTTSSEEEEEEC--------CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCC
T ss_pred CCCceEEEEEcCCCceEEEecCcc------CCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCC
Confidence 456899999999888887765321 1379999999998633334555667899999999985
No 8
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.75 E-value=0.0031 Score=54.92 Aligned_cols=61 Identities=18% Similarity=0.127 Sum_probs=52.0
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCCcC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hPnL 231 (232)
....|++|+|+|..+.|++++-|. .+|.|.+|++... .+...+...+.|.+++|+|....|
T Consensus 258 ~~~~v~~~~~~p~~~~ll~~~~gs-------~d~~i~i~d~~~~--~~~~~~~~~~~v~~~~~s~~~~~l 318 (401)
T 4aez_A 258 HNAAVKAVAWCPWQSNLLATGGGT-------MDKQIHFWNAATG--ARVNTVDAGSQVTSLIWSPHSKEI 318 (401)
T ss_dssp CSSCCCEEEECTTSTTEEEEECCT-------TTCEEEEEETTTC--CEEEEEECSSCEEEEEECSSSSEE
T ss_pred CcceEEEEEECCCCCCEEEEecCC-------CCCEEEEEECCCC--CEEEEEeCCCcEEEEEECCCCCeE
Confidence 456899999999989999887654 3699999999974 688899999999999999987765
No 9
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.73 E-value=0.0039 Score=52.48 Aligned_cols=59 Identities=10% Similarity=0.104 Sum_probs=44.4
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEe--------------CCCCeEEEEecCC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFF--------------CQSPVLSCCFAKF 227 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~--------------~~S~V~~v~FsP~ 227 (232)
-...|++|+|+|....+||++- .+|.|.||++.... ....+. ....|++++|+|.
T Consensus 42 h~~~v~~~~~s~~~~~~l~~~~---------~dg~i~iw~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 110 (408)
T 4a11_B 42 HGGGINTLDIEPVEGRYMLSGG---------SDGVIVLYDLENSS--RQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPH 110 (408)
T ss_dssp CSSCEEEEEECTTTCCEEEEEE---------TTSCEEEEECCCCS--SSSCEEECEEEEECTTCTTCCSSCEEEEEECTT
T ss_pred cCCcEEEEEEecCCCCEEEEEc---------CCCeEEEEECCCCc--ccceEeccccccccccccccCCCcEEEEEEccC
Confidence 3469999999997777777653 25899999999862 333332 5679999999997
Q ss_pred CCcC
Q psy17341 228 FFLY 231 (232)
Q Consensus 228 hPnL 231 (232)
.+++
T Consensus 111 ~~~~ 114 (408)
T 4a11_B 111 DTGM 114 (408)
T ss_dssp CTTC
T ss_pred CCcE
Confidence 7654
No 10
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.71 E-value=0.0018 Score=56.35 Aligned_cols=59 Identities=12% Similarity=0.128 Sum_probs=44.6
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCCcC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hPnL 231 (232)
....|++|+|+|....+||.+- .+|.|.||++... .+-..+.-...|++++|||.++++
T Consensus 268 ~~~~v~~l~~sp~~~~~lasgs---------~D~~i~iwd~~~~--~~~~~~~H~~~V~~vafsP~d~~~ 326 (357)
T 4g56_B 268 HSQNITGLAYSYHSSPFLASIS---------EDCTVAVLDADFS--EVFRDLSHRDFVTGVAWSPLDHSK 326 (357)
T ss_dssp CSSCEEEEEECSSSSCCEEEEE---------TTSCEEEECTTSC--EEEEECCCSSCEEEEEECSSSTTE
T ss_pred cceeEEEEEEcCCCCCEEEEEe---------CCCEEEEEECCCC--cEeEECCCCCCEEEEEEeCCCCCE
Confidence 3468999999998877776542 3689999999874 344444446799999999987664
No 11
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.63 E-value=0.0036 Score=51.17 Aligned_cols=52 Identities=15% Similarity=0.216 Sum_probs=39.3
Q ss_pred eeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC--C-CCeEEEEecCCCCcC
Q psy17341 166 VTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC--Q-SPVLSCCFAKFFFLY 231 (232)
Q Consensus 166 VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~--~-S~V~~v~FsP~hPnL 231 (232)
+.+|+|||.+ +||||. +|.|.||++... ....++.. + ..|+|++|+|....|
T Consensus 28 ~~~l~WS~~~--~lAvg~----------D~tV~iWd~~tg--~~~~~~~~~~~~~~V~~v~~~~~~~~l 82 (318)
T 4ggc_A 28 LNLVDWSSGN--VLAVAL----------DNSVYLWSASSG--DILQLLQMEQPGEYISSVAWIKEGNYL 82 (318)
T ss_dssp CBCEEECTTS--EEEEEE----------TTEEEEEETTTC--CEEEEEECCSTTCCEEEEEECTTSSEE
T ss_pred ceEEEECCCC--EEEEEe----------CCEEEEEECCCC--CEEEEEEecCCCCeEEEEEECCCCCEE
Confidence 4679999874 898863 478999999874 45566543 3 369999999987654
No 12
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.53 E-value=0.0022 Score=54.72 Aligned_cols=66 Identities=14% Similarity=0.160 Sum_probs=48.8
Q ss_pred ceeEeecCCCCCCeEEEE-eccCCCCCCCCCcEEEEEeCCCCCC--CCceEEeCCCCeEEEEecCCCCcC
Q psy17341 165 NVTYMDWSTQHPELLLAS-YHRNKEAPNEPDGVCLIWNTKFKKT--TPEFEFFCQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 165 ~VT~IdWsP~~~eL~aVS-Ygs~~~~~~~~~GlVlvWslk~pk~--~PEyvf~~~S~V~~v~FsP~hPnL 231 (232)
.|++++|||....++|++ +.......-..+|.|.||++... . .|...+.....|.|++|+|....|
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l 82 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAA-DSEKPIASLQVDSKFNDLDWSHNNKII 82 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSG-GGCSCSCCCCCSSCEEEEEECSSSSCE
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCC-CCCcEEEEEecCCceEEEEECCCCCeE
Confidence 689999999987788876 32221112246799999999875 3 366677778899999999976544
No 13
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.42 E-value=0.0052 Score=52.48 Aligned_cols=57 Identities=18% Similarity=0.360 Sum_probs=44.5
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEe---CCCCeEEEEecCCCCc
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFF---CQSPVLSCCFAKFFFL 230 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~---~~S~V~~v~FsP~hPn 230 (232)
...|++|+|+|..+.+||++.. +|.|.||++... .....+. ....|.+++|+|.+.+
T Consensus 73 ~~~v~~~~~~~~~~~~l~s~~~---------dg~i~iwd~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~ 132 (383)
T 3ei3_B 73 DRRVTSLEWHPTHPTTVAVGSK---------GGDIILWDYDVQ--NKTSFIQGMGPGDAITGMKFNQFNTN 132 (383)
T ss_dssp SSCEEEEEECSSCTTEEEEEEB---------TSCEEEEETTST--TCEEEECCCSTTCBEEEEEEETTEEE
T ss_pred CCCEEEEEECCCCCCEEEEEcC---------CCeEEEEeCCCc--ccceeeecCCcCCceeEEEeCCCCCC
Confidence 4689999999998778877642 589999999975 3555554 4679999999996544
No 14
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.40 E-value=0.011 Score=51.71 Aligned_cols=59 Identities=15% Similarity=0.178 Sum_probs=46.3
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCC-CCeEEEEecCCCCcC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQ-SPVLSCCFAKFFFLY 231 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~-S~V~~v~FsP~hPnL 231 (232)
.+..|++++|+|....+||++. .+|.|.||+++.. .+.+.|... ..|.+++|+|...++
T Consensus 213 ~~~~~~~~~~~p~~~~~l~sg~---------~dg~v~~wd~~~~--~~~~~~~~h~~~v~~v~fsp~g~~~ 272 (344)
T 4gqb_B 213 PGYLPTSLAWHPQQSEVFVFGD---------ENGTVSLVDTKST--SCVLSSAVHSQCVTGLVFSPHSVPF 272 (344)
T ss_dssp -CCCEEEEEECSSCTTEEEEEE---------TTSEEEEEESCC----CCEEEECCSSCEEEEEECSSSSCC
T ss_pred eeccceeeeecCCCCcceEEec---------cCCcEEEEECCCC--cEEEEEcCCCCCEEEEEEccCCCeE
Confidence 3456999999999988888763 3689999999985 577888764 589999999987654
No 15
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.39 E-value=0.0038 Score=52.58 Aligned_cols=58 Identities=17% Similarity=0.087 Sum_probs=43.3
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCC-CCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQ-SPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~-S~V~~v~FsP~hPnL 231 (232)
...|++|+|+|..+-|+.++ .+|.|.||++... ..+...+... ..|+|++|+|.++++
T Consensus 97 ~~~v~~~~~~~~~~~l~sgs----------~D~~v~lWd~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~~ 155 (304)
T 2ynn_A 97 PDYIRSIAVHPTKPYVLSGS----------DDLTVKLWNWENN-WALEQTFEGHEHFVMCVAFNPKDPST 155 (304)
T ss_dssp SSCEEEEEECSSSSEEEEEE----------TTSCEEEEEGGGT-TEEEEEECCCCSCEEEEEECTTCTTE
T ss_pred CCcEEEEEEcCCCCEEEEEC----------CCCeEEEEECCCC-cchhhhhcccCCcEEEEEECCCCCCE
Confidence 35799999999865333222 3689999999875 4566677654 589999999987764
No 16
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.32 E-value=0.0065 Score=51.74 Aligned_cols=62 Identities=16% Similarity=0.260 Sum_probs=48.8
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEe--CCCCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFF--CQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~--~~S~V~~v~FsP~hPnL 231 (232)
...|++|+|+|..+.+++++.... ..|.|.+|++... ..|...+. -...|++++|+|...++
T Consensus 214 ~~~v~~~~~~~~~~~~l~~~~~d~------~~~~i~~~d~~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~~ 277 (416)
T 2pm9_A 214 KQQLSVVEWHPKNSTRVATATGSD------NDPSILIWDLRNA-NTPLQTLNQGHQKGILSLDWCHQDEHL 277 (416)
T ss_dssp CCCEEEEEECSSCTTEEEEEECCS------SSCCCCEEETTST-TSCSBCCCSCCSSCEEEEEECSSCSSC
T ss_pred CCceEEEEECCCCCCEEEEEECCC------CCceEEEEeCCCC-CCCcEEeecCccCceeEEEeCCCCCCe
Confidence 578999999999888888775432 2358999999986 67888887 45799999999965544
No 17
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.22 E-value=0.0089 Score=49.49 Aligned_cols=59 Identities=20% Similarity=0.247 Sum_probs=45.3
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEE----eCCCCeEEEEecCCCCcC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEF----FCQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf----~~~S~V~~v~FsP~hPnL 231 (232)
....|++|+|+|....+||++. .+|.|.||++... .+...+ .....|++++|+|....|
T Consensus 114 ~~~~i~~~~~~~~~~~~l~s~~---------~dg~i~iwd~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l 176 (366)
T 3k26_A 114 HGNAINELKFHPRDPNLLLSVS---------KDHALRLWNIQTD--TLVAIFGGVEGHRDEVLSADYDLLGEKI 176 (366)
T ss_dssp CCSCEEEEEECSSCTTEEEEEE---------TTSCEEEEETTTT--EEEEEECSTTSCSSCEEEEEECTTSSEE
T ss_pred CCCcEEEEEECCCCCCEEEEEe---------CCCeEEEEEeecC--eEEEEecccccccCceeEEEECCCCCEE
Confidence 4568999999997777777653 2689999999874 466666 346799999999965443
No 18
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.21 E-value=0.0073 Score=52.50 Aligned_cols=58 Identities=9% Similarity=0.093 Sum_probs=46.6
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCC-CCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQ-SPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~-S~V~~v~FsP~hPnL 231 (232)
...|++|+|+|....+||++. .+|.|.||+++.+ .+...+... ..|.+++|+|...++
T Consensus 226 ~~~v~~v~~sp~~~~~la~g~---------~d~~i~~wd~~~~--~~~~~~~~~~~~v~~l~~sp~~~~~ 284 (357)
T 4g56_B 226 DTIPTSVTWHPEKDDTFACGD---------ETGNVSLVNIKNP--DSAQTSAVHSQNITGLAYSYHSSPF 284 (357)
T ss_dssp CSCEEEEEECTTSTTEEEEEE---------SSSCEEEEESSCG--GGCEEECCCSSCEEEEEECSSSSCC
T ss_pred cccccchhhhhcccceEEEee---------cccceeEEECCCC--cEeEEEeccceeEEEEEEcCCCCCE
Confidence 456999999999888888763 3588999999986 466667654 589999999987654
No 19
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.17 E-value=0.0074 Score=52.80 Aligned_cols=58 Identities=12% Similarity=0.085 Sum_probs=43.6
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCCCCcCC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKFFFLYA 232 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~hPnLI 232 (232)
...|++|+|||....+||.+- .+|.|.||++... ..+.+.. ...|++++|||..++||
T Consensus 257 ~~~v~~v~fsp~g~~~lasgs---------~D~~i~vwd~~~~---~~~~~~~H~~~V~~v~~sp~~~~ll 315 (344)
T 4gqb_B 257 SQCVTGLVFSPHSVPFLASLS---------EDCSLAVLDSSLS---ELFRSQAHRDFVRDATWSPLNHSLL 315 (344)
T ss_dssp SSCEEEEEECSSSSCCEEEEE---------TTSCEEEECTTCC---EEEEECCCSSCEEEEEECSSSTTEE
T ss_pred CCCEEEEEEccCCCeEEEEEe---------CCCeEEEEECCCC---cEEEEcCCCCCEEEEEEeCCCCeEE
Confidence 458999999998777776542 3689999998764 2334444 46899999999988764
No 20
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.13 E-value=0.012 Score=48.59 Aligned_cols=61 Identities=15% Similarity=0.154 Sum_probs=43.7
Q ss_pred CCcceeEeecCCCC--CCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEe-CCCCeEEEEecCCCCcC
Q psy17341 162 KNRNVTYMDWSTQH--PELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFF-CQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 162 K~R~VT~IdWsP~~--~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~-~~S~V~~v~FsP~hPnL 231 (232)
-...|+||+|+|.. ..+||++- .+|.|.||++..........+. ....|.+++|+|....|
T Consensus 38 h~~~v~~~~~~~~~~~g~~l~~~~---------~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 101 (368)
T 3mmy_A 38 PDDSIGCLSFSPPTLPGNFLIAGS---------WANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKV 101 (368)
T ss_dssp CSSCEEEEEECCTTSSSEEEEEEE---------TTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEE
T ss_pred CCCceEEEEEcCCCCCceEEEEEC---------CCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEE
Confidence 45689999999987 56666652 3589999999974122324444 46799999999965544
No 21
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=96.08 E-value=0.0025 Score=56.12 Aligned_cols=59 Identities=20% Similarity=0.107 Sum_probs=42.8
Q ss_pred cceeEeecCCCCC------CeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCCcC
Q psy17341 164 RNVTYMDWSTQHP------ELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 164 R~VT~IdWsP~~~------eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hPnL 231 (232)
-.|++|+|+|.+. +-++||-+ .||.|.||++... .....++.-.++|++++|+|..+++
T Consensus 137 ~~v~~v~~~p~~~~~~~~d~~~las~s--------~D~tv~~Wd~~~~-~~~~~~~~~~~~v~~v~~~p~~~~~ 201 (393)
T 4gq1_A 137 NFVNDIDIADVYSADNRLAEQVIASVG--------DDCTLIIWRLTDE-GPILAGYPLSSPGISVQFRPSNPNQ 201 (393)
T ss_dssp SCEEEEEEEEEECTTCSEEEEEEEEEE--------TTSEEEEEEEETT-EEEEEEEECSSCEEEEEEETTEEEE
T ss_pred CceEEEEEccccccccCCCCCEEEEEE--------CCCeEEEEECCCC-ceeeeecCCCCCcEEEEECCCCCce
Confidence 4799999998543 22333333 3689999999875 3344556668899999999998764
No 22
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.07 E-value=0.014 Score=48.28 Aligned_cols=59 Identities=14% Similarity=0.045 Sum_probs=44.8
Q ss_pred CCcceeEeecCCCCC---CeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEe-CCCCeEEEEecCCCCcC
Q psy17341 162 KNRNVTYMDWSTQHP---ELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFF-CQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 162 K~R~VT~IdWsP~~~---eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~-~~S~V~~v~FsP~hPnL 231 (232)
....|++++|+|... .+||++. .+|.|.||++... .+...+. ...+|.+++|+|.++++
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~---------~dg~i~v~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~ 130 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAG---------SRGIIRIINPITM--QCIKHYVGHGNAINELKFHPRDPNL 130 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEE---------TTCEEEEECTTTC--CEEEEEESCCSCEEEEEECSSCTTE
T ss_pred CCCcEEEEEeccCCCCCCCEEEEec---------CCCEEEEEEchhc--eEeeeecCCCCcEEEEEECCCCCCE
Confidence 446799999999865 3565553 3589999999874 5677777 46699999999966654
No 23
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.05 E-value=0.012 Score=50.26 Aligned_cols=59 Identities=19% Similarity=0.189 Sum_probs=45.5
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCC--CCCceEEeCCCCeEEEEecCCCCc
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKK--TTPEFEFFCQSPVLSCCFAKFFFL 230 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk--~~PEyvf~~~S~V~~v~FsP~hPn 230 (232)
...|++|+|+|..+.+|+++- .+|.|.||++...+ ..+...+.....|++++|+|.+.+
T Consensus 204 ~~~v~~~~~~~~~~~~l~s~~---------~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 264 (383)
T 3ei3_B 204 KAKVTHAEFNPRCDWLMATSS---------VDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDST 264 (383)
T ss_dssp SSCEEEEEECSSCTTEEEEEE---------TTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSC
T ss_pred CCcEEEEEECCCCCCEEEEEe---------CCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCC
Confidence 468999999998887777652 36899999998742 245666777889999999994443
No 24
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.04 E-value=0.014 Score=51.19 Aligned_cols=61 Identities=16% Similarity=0.150 Sum_probs=52.0
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCCcC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hPnL 231 (232)
....|++++|+|..+.+++++-|+. +|.|.||++... .+...+.....|.++.|+|....|
T Consensus 275 ~~~~V~~~~~~p~~~~~la~~~gs~-------D~~I~iwd~~t~--~~~~~~~~~~~v~~~~~~~~~~~l 335 (420)
T 4gga_A 275 HQGAVKAVAWCPWQSNVLATGGGTS-------DRHIRIWNVCSG--ACLSAVDAHSQVCSILWSPHYKEL 335 (420)
T ss_dssp CSSCEEEEEECTTCTTEEEEEECTT-------TCEEEEEETTTT--EEEEEEECSSCEEEEEEETTTTEE
T ss_pred cCCceeeeeeCCCcccEEEEEeecC-------CCEEEEEeCCcc--ccceeeccccceeeeeecCCCCeE
Confidence 3457999999999999999877653 699999999984 688889999999999999987654
No 25
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=95.96 E-value=0.017 Score=48.52 Aligned_cols=60 Identities=13% Similarity=0.255 Sum_probs=45.7
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEE----------------eCCCCeEEEEec
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEF----------------FCQSPVLSCCFA 225 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf----------------~~~S~V~~v~Fs 225 (232)
....|++|+|+|..+-+|+++. .+|.|.+|++... ..+-..+ .....|.+++|+
T Consensus 185 ~~~~v~~~~~~~~~~~ll~~~~---------~dg~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 254 (408)
T 4a11_B 185 HRQEILAVSWSPRYDYILATAS---------ADSRVKLWDVRRA-SGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFT 254 (408)
T ss_dssp CCSCEEEEEECSSCTTEEEEEE---------TTSCEEEEETTCS-SCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEEC
T ss_pred CCCcEEEEEECCCCCcEEEEEc---------CCCcEEEEECCCC-CcccccccccccccceeeccccccccCceeEEEEc
Confidence 3468999999999888777764 3589999999886 5555554 235689999999
Q ss_pred CCCCcC
Q psy17341 226 KFFFLY 231 (232)
Q Consensus 226 P~hPnL 231 (232)
|....|
T Consensus 255 ~~~~~l 260 (408)
T 4a11_B 255 SDGLHL 260 (408)
T ss_dssp TTSSEE
T ss_pred CCCCEE
Confidence 976544
No 26
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=95.96 E-value=0.012 Score=47.63 Aligned_cols=55 Identities=7% Similarity=0.011 Sum_probs=38.8
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCC--CCceEEeC-CCCeEEEEecCC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKT--TPEFEFFC-QSPVLSCCFAKF 227 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~--~PEyvf~~-~S~V~~v~FsP~ 227 (232)
...|++|+|+|.- .+||++- .+|.|.||++..... .+...+.. ..+|+|++|+|.
T Consensus 11 ~~~v~~~~~~~~~-~~l~~~~---------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 68 (351)
T 3f3f_A 11 DDLVHDVVYDFYG-RHVATCS---------SDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASP 68 (351)
T ss_dssp SSCEEEEEECSSS-SEEEEEE---------TTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCG
T ss_pred ccceeEEEEcCCC-CEEEEee---------CCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCC
Confidence 4589999999954 4555542 369999999987411 23344443 569999999995
No 27
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=95.90 E-value=0.01 Score=51.53 Aligned_cols=59 Identities=22% Similarity=0.283 Sum_probs=44.8
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCC---CC-CCCceEEeCCCCeEEEEecCCCCc
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKF---KK-TTPEFEFFCQSPVLSCCFAKFFFL 230 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~---pk-~~PEyvf~~~S~V~~v~FsP~hPn 230 (232)
...|++|+|+|....+||.+- .+|.|.||++.. .. ..+...+....+|+|++|+|....
T Consensus 63 ~~~V~~~~~s~~~~~~l~s~s---------~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 125 (437)
T 3gre_A 63 PNSITSSAVSPGETPYLITGS---------DQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDA 125 (437)
T ss_dssp TSCEEEEEEECSSSCEEEEEE---------TTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSE
T ss_pred CCceEEEEECCCCCCEEEEec---------CCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCE
Confidence 368999999996666776653 469999999865 21 346777777899999999996543
No 28
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=95.84 E-value=0.027 Score=48.02 Aligned_cols=56 Identities=23% Similarity=0.240 Sum_probs=43.4
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFF 229 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hP 229 (232)
...|++|+|+|.-. +||++- .+|.|.||++... ..|...+.....|.+++|+|...
T Consensus 213 ~~~v~~~~~s~~g~-~l~sgs---------~dg~v~iwd~~~~-~~~~~~~~~~~~v~~v~~sp~~~ 268 (343)
T 2xzm_R 213 ESNVNHLSISPNGK-YIATGG---------KDKKLLIWDILNL-TYPQREFDAGSTINQIAFNPKLQ 268 (343)
T ss_dssp SSCEEEEEECTTSS-EEEEEE---------TTCEEEEEESSCC-SSCSEEEECSSCEEEEEECSSSC
T ss_pred cccceEEEECCCCC-EEEEEc---------CCCeEEEEECCCC-cccceeecCCCcEEEEEECCCCC
Confidence 34799999998644 343321 3699999999775 67888887788999999999754
No 29
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.83 E-value=0.03 Score=46.55 Aligned_cols=57 Identities=23% Similarity=0.234 Sum_probs=42.4
Q ss_pred CCcceeEeecCCCC-CCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEe-CCCCeEEEEecCC
Q psy17341 162 KNRNVTYMDWSTQH-PELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFF-CQSPVLSCCFAKF 227 (232)
Q Consensus 162 K~R~VT~IdWsP~~-~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~-~~S~V~~v~FsP~ 227 (232)
....|++|+|+|.. ..+|+++. .+|.|.+|++......+...+. ....|++++|+|.
T Consensus 100 ~~~~v~~~~~~~~~~~~~l~~~~---------~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~ 158 (379)
T 3jrp_A 100 HSASVNSVQWAPHEYGPLLLVAS---------SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 158 (379)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEE---------TTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCC
T ss_pred CCcceEEEEeCCCCCCCEEEEec---------CCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCc
Confidence 35689999999985 56666663 3689999999886333444444 4569999999995
No 30
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=95.82 E-value=0.018 Score=46.93 Aligned_cols=61 Identities=20% Similarity=0.148 Sum_probs=48.6
Q ss_pred cCCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCCCCcC
Q psy17341 161 SKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 161 SK~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~hPnL 231 (232)
.....|.++.|+|....+++++-+ .+|.|.||++... .+...|.. ...|+|++|+|....|
T Consensus 238 ~~~~~v~~~~~~~~~~~~~~~sg~--------~d~~i~iwd~~~~--~~~~~l~gH~~~V~~l~~spdg~~l 299 (318)
T 4ggc_A 238 DAHSQVCSILWSPHYKELISGHGF--------AQNQLVIWKYPTM--AKVAELKGHTSRVLSLTMSPDGATV 299 (318)
T ss_dssp ECSSCEEEEEEETTTTEEEEEECT--------TTCCEEEEETTTC--CEEEEECCCSSCEEEEEECTTSSCE
T ss_pred cceeeeeeeeecccccceEEEEEc--------CCCEEEEEECCCC--cEEEEEcCCCCCEEEEEEcCCCCEE
Confidence 455679999999999888876522 3689999999874 68888877 4699999999987655
No 31
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.81 E-value=0.017 Score=49.18 Aligned_cols=58 Identities=16% Similarity=0.136 Sum_probs=43.1
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC--CCCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC--QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~--~S~V~~v~FsP~hPnL 231 (232)
+..|++++|+|. ..+||++- .+|.|.||++... ..+...|.. ..+|++++|+|....|
T Consensus 170 ~~~i~~~~~~pd-g~~lasg~---------~dg~i~iwd~~~~-~~~~~~~~~~h~~~v~~l~fs~~g~~l 229 (343)
T 3lrv_A 170 DVEYSSGVLHKD-SLLLALYS---------PDGILDVYNLSSP-DQASSRFPVDEEAKIKEVKFADNGYWM 229 (343)
T ss_dssp SCCCCEEEECTT-SCEEEEEC---------TTSCEEEEESSCT-TSCCEECCCCTTSCEEEEEECTTSSEE
T ss_pred CCceEEEEECCC-CCEEEEEc---------CCCEEEEEECCCC-CCCccEEeccCCCCEEEEEEeCCCCEE
Confidence 346999999995 34555541 4699999999986 444366666 6799999999976544
No 32
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.77 E-value=0.011 Score=49.74 Aligned_cols=60 Identities=12% Similarity=0.017 Sum_probs=41.8
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeC----CCCCCC-----CceEEeC-----------CCCeEE
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNT----KFKKTT-----PEFEFFC-----------QSPVLS 221 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWsl----k~pk~~-----PEyvf~~-----------~S~V~~ 221 (232)
....|++|+|+|.-+.+||++- .+|.|.||++ ... .. +...+.. ...|+|
T Consensus 44 ~~~~v~~~~~s~~~~~~l~~~~---------~dg~i~iw~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 113 (425)
T 1r5m_A 44 KLDNIVSSTWNPLDESILAYGE---------KNSVARLARIVETDQEG-KKYWKLTIIAELRHPFALSASSGKTTNQVTC 113 (425)
T ss_dssp ECSCCSEEEECSSCTTEEEEEE---------TBTEEEEEEEEEC-------CEEEEEEEEEECCCCCC------CBCEEE
T ss_pred ccCceEEEEECCCCCcEEEEec---------CCceEEEEEEecccCCc-cccccccccccccccccccccccCCCCceEE
Confidence 3458999999998877777663 3589999999 765 32 4555554 449999
Q ss_pred EEecCCCCcC
Q psy17341 222 CCFAKFFFLY 231 (232)
Q Consensus 222 v~FsP~hPnL 231 (232)
++|+|....|
T Consensus 114 ~~~s~~~~~l 123 (425)
T 1r5m_A 114 LAWSHDGNSI 123 (425)
T ss_dssp EEECTTSSEE
T ss_pred EEEcCCCCEE
Confidence 9999965443
No 33
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.76 E-value=0.022 Score=47.04 Aligned_cols=57 Identities=11% Similarity=0.078 Sum_probs=44.7
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hPnL 231 (232)
...|++|+|+|.- .+||++- .+|.|.||++... .+...+....+|.++.|+|....|
T Consensus 74 ~~~v~~~~~~~~~-~~l~s~~---------~dg~i~iwd~~~~--~~~~~~~~~~~v~~~~~~~~~~~l 130 (369)
T 3zwl_B 74 TGTIWSIDVDCFT-KYCVTGS---------ADYSIKLWDVSNG--QCVATWKSPVPVKRVEFSPCGNYF 130 (369)
T ss_dssp SSCEEEEEECTTS-SEEEEEE---------TTTEEEEEETTTC--CEEEEEECSSCEEEEEECTTSSEE
T ss_pred CCcEEEEEEcCCC-CEEEEEe---------CCCeEEEEECCCC--cEEEEeecCCCeEEEEEccCCCEE
Confidence 4579999999954 4555432 2689999999884 688888889999999999986654
No 34
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=95.73 E-value=0.026 Score=48.64 Aligned_cols=60 Identities=8% Similarity=0.022 Sum_probs=44.8
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCC--CCCceEEeCCC-------------CeEEEEecCC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKK--TTPEFEFFCQS-------------PVLSCCFAKF 227 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk--~~PEyvf~~~S-------------~V~~v~FsP~ 227 (232)
...|++|+|+|..+.+||++- .+|.|.||++...+ ..+-.+|..+. .|.+++|+|.
T Consensus 226 ~~~v~~~~~~p~~~~~l~s~~---------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 296 (447)
T 3dw8_B 226 TEVITAAEFHPNSCNTFVYSS---------SKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHS 296 (447)
T ss_dssp CCCEEEEEECSSCTTEEEEEE---------TTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTT
T ss_pred CcceEEEEECCCCCcEEEEEe---------CCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCC
Confidence 456999999999877777654 36899999998851 11257777765 8999999997
Q ss_pred CCcC
Q psy17341 228 FFLY 231 (232)
Q Consensus 228 hPnL 231 (232)
...|
T Consensus 297 g~~l 300 (447)
T 3dw8_B 297 GRYM 300 (447)
T ss_dssp SSEE
T ss_pred CCEE
Confidence 6544
No 35
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=95.71 E-value=0.016 Score=49.99 Aligned_cols=57 Identities=11% Similarity=0.134 Sum_probs=40.6
Q ss_pred cCCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCC----------CceEEeCC-------------C
Q psy17341 161 SKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTT----------PEFEFFCQ-------------S 217 (232)
Q Consensus 161 SK~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~----------PEyvf~~~-------------S 217 (232)
.....|++|+|||. ..+||++- .+|.|.||++... .. +...+... .
T Consensus 26 ~~~~~V~~v~~s~~-g~~la~g~---------~dg~v~iw~~~~~-~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~ 94 (447)
T 3dw8_B 26 AEADIISTVEFNHS-GELLATGD---------KGGRVVIFQQEQE-NKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEE 94 (447)
T ss_dssp CGGGSEEEEEECSS-SSEEEEEE---------TTSEEEEEEECC------CCCCCCEEEEEEEECCCCEEEGGGTEEECC
T ss_pred cccCcEEEEEECCC-CCEEEEEc---------CCCeEEEEEecCC-CCCCcccccceeEecccccccccccccccccccC
Confidence 44679999999994 45666542 3699999999875 21 24455554 7
Q ss_pred CeEEEEecCCC
Q psy17341 218 PVLSCCFAKFF 228 (232)
Q Consensus 218 ~V~~v~FsP~h 228 (232)
.|++++|+|..
T Consensus 95 ~V~~l~~~~~~ 105 (447)
T 3dw8_B 95 KINKIRWLPQK 105 (447)
T ss_dssp CCCEEEECCCC
T ss_pred ceEEEEEcCCC
Confidence 79999999985
No 36
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=95.69 E-value=0.0095 Score=54.09 Aligned_cols=57 Identities=16% Similarity=0.216 Sum_probs=42.6
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEe-CCCCeEEEEecCCCCc
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFF-CQSPVLSCCFAKFFFL 230 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~-~~S~V~~v~FsP~hPn 230 (232)
...|++|+|||..+.+||++- .+|.|.||+++.. . ...... ....|.|++|||.--.
T Consensus 149 ~~~V~~v~~~p~~~~~las~s---------~Dg~v~iwD~~~~-~-~~~~~~~~~~~v~~v~wspdg~~ 206 (434)
T 2oit_A 149 GGMVIDMKWNPTVPSMVAVCL---------ADGSIAVLQVTET-V-KVCATLPSTVAVTSVCWSPKGKQ 206 (434)
T ss_dssp GGSEEEEEECSSCTTEEEEEE---------TTSCEEEEEESSS-E-EEEEEECGGGCEEEEEECTTSSC
T ss_pred CCceEEEEECCCCCCEEEEEE---------CCCeEEEEEcCCC-c-ceeeccCCCCceeEEEEcCCCCE
Confidence 457999999999888888764 2589999999885 2 222222 2568999999997433
No 37
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=95.65 E-value=0.014 Score=47.24 Aligned_cols=58 Identities=12% Similarity=0.267 Sum_probs=42.5
Q ss_pred CCcceeEeecCCC-CCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCC-------CCceEEeC-CCCeEEEEecCCC
Q psy17341 162 KNRNVTYMDWSTQ-HPELLLASYHRNKEAPNEPDGVCLIWNTKFKKT-------TPEFEFFC-QSPVLSCCFAKFF 228 (232)
Q Consensus 162 K~R~VT~IdWsP~-~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~-------~PEyvf~~-~S~V~~v~FsP~h 228 (232)
....|++|+|+|. ...+|+++. .+|.|.||++..... .+...+.. ...|.+++|+|.+
T Consensus 56 ~~~~v~~~~~~~~~d~~~l~s~~---------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 122 (351)
T 3f3f_A 56 HDSSIVAIDWASPEYGRIIASAS---------YDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAH 122 (351)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEE---------TTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGG
T ss_pred CCCcEEEEEEcCCCCCCEEEEEc---------CCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCC
Confidence 4568999999997 567777653 368999999987411 33445544 5689999999983
No 38
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.64 E-value=0.02 Score=47.29 Aligned_cols=55 Identities=20% Similarity=0.333 Sum_probs=42.0
Q ss_pred ceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCCCCcC
Q psy17341 165 NVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 165 ~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~hPnL 231 (232)
.|++|+|+|... +||++- .+|.|.||++... .+...+.. ..+|.+++|+|....|
T Consensus 275 ~v~~~~~sp~~~-~l~s~~---------~dg~i~iwd~~~~--~~~~~~~~~~~~v~~~~~s~~g~~l 330 (368)
T 3mmy_A 275 AVNGIAFHPVHG-TLATVG---------SDGRFSFWDKDAR--TKLKTSEQLDQPISACCFNHNGNIF 330 (368)
T ss_dssp CEEEEEECTTTC-CEEEEE---------TTSCEEEEETTTT--EEEEECCCCSSCEEEEEECTTSSCE
T ss_pred ceEEEEEecCCC-EEEEEc---------cCCeEEEEECCCC--cEEEEecCCCCCceEEEECCCCCeE
Confidence 699999999654 444442 3689999999974 56666665 5699999999987655
No 39
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.53 E-value=0.025 Score=47.91 Aligned_cols=57 Identities=19% Similarity=0.216 Sum_probs=45.8
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-------CCCeEEEEecCCCCcC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-------QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-------~S~V~~v~FsP~hPnL 231 (232)
....|++|+|+|.. +|+++. .+|.|.+|++... .+...+.. ..+|.+++|+|....|
T Consensus 185 ~~~~i~~~~~~~~~--~l~~~~---------~dg~i~i~d~~~~--~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l 248 (397)
T 1sq9_A 185 PSQFATSVDISERG--LIATGF---------NNGTVQISELSTL--RPLYNFESQHSMINNSNSIRSVKFSPQGSLL 248 (397)
T ss_dssp SCCCCCEEEECTTS--EEEEEC---------TTSEEEEEETTTT--EEEEEEECCC---CCCCCEEEEEECSSTTEE
T ss_pred CCCCceEEEECCCc--eEEEEe---------CCCcEEEEECCCC--ceeEEEeccccccccCCccceEEECCCCCEE
Confidence 36679999999977 666653 3689999999874 68888887 7899999999975443
No 40
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.52 E-value=0.019 Score=47.42 Aligned_cols=61 Identities=15% Similarity=0.105 Sum_probs=45.2
Q ss_pred cCCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCC------------------ceEEeC-CCCeEE
Q psy17341 161 SKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTP------------------EFEFFC-QSPVLS 221 (232)
Q Consensus 161 SK~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~P------------------Eyvf~~-~S~V~~ 221 (232)
.....|++|+|+|..+.+|+++- .+|.|.||++..+ ..+ ...+.. ...|.+
T Consensus 257 ~~~~~v~~~~~~~~~~~~l~~~~---------~dg~i~iwd~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~ 326 (357)
T 3i2n_A 257 AHKSTVWQVRHLPQNRELFLTAG---------GAGGLHLWKYEYP-IQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISS 326 (357)
T ss_dssp CCSSCEEEEEEETTEEEEEEEEE---------TTSEEEEEEEECC-SCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEE
T ss_pred CCcCCEEEEEECCCCCcEEEEEe---------CCCcEEEeecCCC-cccccccCCCCccccccccceeeccccCCCCeeE
Confidence 34568999999998776777653 3689999999876 333 233443 458999
Q ss_pred EEecCCCCcC
Q psy17341 222 CCFAKFFFLY 231 (232)
Q Consensus 222 v~FsP~hPnL 231 (232)
++|+|....|
T Consensus 327 ~~~s~~~~~l 336 (357)
T 3i2n_A 327 LDWSPDKRGL 336 (357)
T ss_dssp EEECSSSTTE
T ss_pred EEEcCCCCeE
Confidence 9999987765
No 41
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=95.49 E-value=0.034 Score=47.56 Aligned_cols=58 Identities=14% Similarity=0.072 Sum_probs=42.4
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCCCCcC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~hPnL 231 (232)
-...|++|+|+|... +||++- .+|.|.||++... .+...+.. ...|++++|+|....|
T Consensus 138 h~~~v~~~~~~~~~~-~l~s~s---------~d~~i~iwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l 196 (420)
T 3vl1_A 138 HVSEITKLKFFPSGE-ALISSS---------QDMQLKIWSVKDG--SNPRTLIGHRATVTDIAIIDRGRNV 196 (420)
T ss_dssp SSSCEEEEEECTTSS-EEEEEE---------TTSEEEEEETTTC--CCCEEEECCSSCEEEEEEETTTTEE
T ss_pred ccCccEEEEECCCCC-EEEEEe---------CCCeEEEEeCCCC--cCceEEcCCCCcEEEEEEcCCCCEE
Confidence 346899999999744 444432 3689999999885 45555654 5699999999976544
No 42
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.49 E-value=0.016 Score=49.02 Aligned_cols=53 Identities=11% Similarity=0.252 Sum_probs=40.0
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCC-----CCceEEe-CCCCeEEEEecCC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKT-----TPEFEFF-CQSPVLSCCFAKF 227 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~-----~PEyvf~-~~S~V~~v~FsP~ 227 (232)
-...|++|+|+| .+||++- .+|.|.||++... . .+...+. ...+|+|++|+|.
T Consensus 15 h~~~i~~~~~~~---~~l~s~~---------~dg~i~iw~~~~~-~~~~~~~~~~~~~~h~~~v~~~~~~~~ 73 (397)
T 1sq9_A 15 HDADIFSVSACN---SFTVSCS---------GDGYLKVWDNKLL-DNENPKDKSYSHFVHKSGLHHVDVLQA 73 (397)
T ss_dssp SSSCEEEEEECS---SEEEEEE---------TTSEEEEEESBCC-TTCCGGGGEEEEECCTTCEEEEEEEEE
T ss_pred hhcCeEEEEecC---CeEEEEc---------CCCEEEEEECCCc-ccccCCCcceEEecCCCcEEEEEEecc
Confidence 345999999998 6777662 3689999999886 3 1344444 4579999999987
No 43
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.34 E-value=0.043 Score=45.21 Aligned_cols=58 Identities=9% Similarity=0.140 Sum_probs=45.7
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCCcC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hPnL 231 (232)
....|++|+|+|... +|+++. .+|.|.+|++... .+...+....+|.++.|+|....|
T Consensus 217 ~~~~v~~~~~~~~~~-~l~~~~---------~d~~i~v~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~l 274 (369)
T 3zwl_B 217 HEKSISDMQFSPDLT-YFITSS---------RDTNSFLVDVSTL--QVLKKYETDCPLNTAVITPLKEFI 274 (369)
T ss_dssp CSSCEEEEEECTTSS-EEEEEE---------TTSEEEEEETTTC--CEEEEEECSSCEEEEEECSSSSEE
T ss_pred CCCceeEEEECCCCC-EEEEec---------CCceEEEEECCCC--ceeeeecCCCCceeEEecCCCceE
Confidence 356899999999644 444442 3689999999984 688888889999999999987754
No 44
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.31 E-value=0.012 Score=52.08 Aligned_cols=60 Identities=18% Similarity=0.251 Sum_probs=43.6
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEE--eCCCCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEF--FCQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf--~~~S~V~~v~FsP~hPnL 231 (232)
...|++|+|+|..+.+||++- .+|.|.||++...+....+.. .-..+|++++|+|....|
T Consensus 250 ~~~v~~v~~~p~~~~~~~s~s---------~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l 311 (435)
T 4e54_B 250 KKKVTHVALNPCCDWFLATAS---------VDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARL 311 (435)
T ss_dssp SSCEEEEEECTTCSSEEEEEE---------TTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEE
T ss_pred cceEEeeeecCCCceEEEEec---------CcceeeEEecccccccceEEEeeeccccccceeECCCCCee
Confidence 357999999999888887653 368999999988633333322 225689999999976554
No 45
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=95.27 E-value=0.02 Score=48.05 Aligned_cols=55 Identities=18% Similarity=0.198 Sum_probs=40.8
Q ss_pred cceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCCCCc
Q psy17341 164 RNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKFFFL 230 (232)
Q Consensus 164 R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~hPn 230 (232)
..|++|+|||.-+-|++++ .+|.|.||++... .+...+.. ..+|.+++|+|....
T Consensus 14 ~~V~~~~fsp~~~~l~s~~----------~dg~v~lWd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~ 69 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTL----------YSGRVELWNYETQ--VEVRSIQVTETPVRAGKFIARKNW 69 (304)
T ss_dssp SCEEEEEECSSSSEEEEEE----------TTSEEEEEETTTT--EEEEEEECCSSCEEEEEEEGGGTE
T ss_pred CceEEEEECCCCCEEEEEc----------CCCcEEEEECCCC--ceeEEeeccCCcEEEEEEeCCCCE
Confidence 4799999999876555443 2689999999875 35555554 568999999987543
No 46
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=95.24 E-value=0.034 Score=48.07 Aligned_cols=59 Identities=17% Similarity=0.288 Sum_probs=45.1
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEE--e-CCCCeEEEEecCCCCcC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEF--F-CQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf--~-~~S~V~~v~FsP~hPnL 231 (232)
-...|++|+|+|.-+.+|+++. .+|.|.||++... .+...+ . ....|++++|+|....|
T Consensus 130 h~~~v~~~~~~p~~~~~l~s~~---------~dg~i~iwd~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l 191 (402)
T 2aq5_A 130 HTKRVGIVAWHPTAQNVLLSAG---------CDNVILVWDVGTG--AAVLTLGPDVHPDTIYSVDWSRDGALI 191 (402)
T ss_dssp CSSCEEEEEECSSBTTEEEEEE---------TTSCEEEEETTTT--EEEEEECTTTCCSCEEEEEECTTSSCE
T ss_pred CCCeEEEEEECcCCCCEEEEEc---------CCCEEEEEECCCC--CccEEEecCCCCCceEEEEECCCCCEE
Confidence 3468999999999877777653 3589999999974 566676 3 35699999999965433
No 47
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=95.24 E-value=0.038 Score=46.77 Aligned_cols=56 Identities=23% Similarity=0.373 Sum_probs=44.1
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCCc
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFFL 230 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hPn 230 (232)
...|++++|+|.-. +||.+- .+|.|.||++... .+.+.+..+..|.+++|+|....
T Consensus 196 ~~~v~~~~~sp~g~-~l~s~~---------~dg~i~iwd~~~~--~~~~~~~~~~~v~~~~~sp~~~~ 251 (319)
T 3frx_A 196 NSNINTLTASPDGT-LIASAG---------KDGEIMLWNLAAK--KAMYTLSAQDEVFSLAFSPNRYW 251 (319)
T ss_dssp CSCEEEEEECTTSS-EEEEEE---------TTCEEEEEETTTT--EEEEEEECCSCEEEEEECSSSSE
T ss_pred CCcEEEEEEcCCCC-EEEEEe---------CCCeEEEEECCCC--cEEEEecCCCcEEEEEEcCCCCE
Confidence 45799999999643 444331 3699999999985 68888899999999999997654
No 48
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.17 E-value=0.036 Score=48.57 Aligned_cols=61 Identities=20% Similarity=0.154 Sum_probs=47.7
Q ss_pred cCCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCC-CCeEEEEecCCCCcC
Q psy17341 161 SKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQ-SPVLSCCFAKFFFLY 231 (232)
Q Consensus 161 SK~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~-S~V~~v~FsP~hPnL 231 (232)
..+..|+++.|+|....|++++-. .+|.|.||++... .+-..|..+ ..|++++|+|....|
T Consensus 318 ~~~~~v~~~~~~~~~~~lv~~sg~--------~d~~I~iwd~~~~--~~v~~l~gH~~~V~~l~~spdg~~l 379 (420)
T 4gga_A 318 DAHSQVCSILWSPHYKELISGHGF--------AQNQLVIWKYPTM--AKVAELKGHTSRVLSLTMSPDGATV 379 (420)
T ss_dssp ECSSCEEEEEEETTTTEEEEEECT--------TTCCEEEEETTTC--CEEEEECCCSSCEEEEEECTTSSCE
T ss_pred ccccceeeeeecCCCCeEEEEEec--------CCCEEEEEECCCC--cEEEEEcCCCCCEEEEEEcCCCCEE
Confidence 345679999999999888766422 3589999999874 688888774 589999999986654
No 49
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=95.16 E-value=0.016 Score=52.65 Aligned_cols=64 Identities=9% Similarity=-0.008 Sum_probs=44.5
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCC------CCCCceEEeC----CCCeEEEEecCCCCcCC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFK------KTTPEFEFFC----QSPVLSCCFAKFFFLYA 232 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~p------k~~PEyvf~~----~S~V~~v~FsP~hPnLI 232 (232)
...|++|+|||.- .+|||+|.+. ..+|.|.||++... ...|-+.+.. ...|.+++|||.++++|
T Consensus 92 ~~~v~~l~~spdg-~~lav~~~sg-----s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l 165 (434)
T 2oit_A 92 KFPIHHLALSCDN-LTLSACMMSS-----EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMV 165 (434)
T ss_dssp SSCEEEEEECTTS-CEEEEEEEET-----TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEE
T ss_pred CCcccEEEEcCCC-CEEEEEEecc-----CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEE
Confidence 3469999999974 5777776321 24799999987542 0245444443 56899999999977653
No 50
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.11 E-value=0.055 Score=44.87 Aligned_cols=59 Identities=15% Similarity=0.211 Sum_probs=42.4
Q ss_pred CcceeEeecCCCC--CCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCc--eEEe---CCCCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQH--PELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPE--FEFF---CQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~--~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PE--yvf~---~~S~V~~v~FsP~hPnL 231 (232)
...|++|+|+|.. ..+||++- .+|.|.||++... ..|. .++. ....|++++|+|....|
T Consensus 206 ~~~v~~~~~sp~~~~~~~l~s~~---------~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 271 (379)
T 3jrp_A 206 SDWVRDVAWSPTVLLRSYLASVS---------QDRTCIIWTQDNE-QGPWKKTLLKEEKFPDVLWRASWSLSGNVL 271 (379)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEE---------TTSCEEEEEESST-TSCCEEEESSSSCCSSCEEEEEECSSSCCE
T ss_pred cCcEeEEEECCCCCCCCeEEEEe---------CCCEEEEEeCCCC-CccceeeeeccccCCCcEEEEEEcCCCCEE
Confidence 4579999999986 56666652 3589999999885 3332 1221 45789999999987654
No 51
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=95.06 E-value=0.04 Score=47.85 Aligned_cols=59 Identities=8% Similarity=0.164 Sum_probs=46.4
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCC-CCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQ-SPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~-S~V~~v~FsP~hPnL 231 (232)
...|++++|+|....+|+.+- .+|.|.||++... ..+-..+... ..|.+++|+|....|
T Consensus 205 ~~~v~~~~~~~~~~~~l~sgs---------~D~~v~~wd~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~l 264 (380)
T 3iz6_a 205 TADVLSLSINSLNANMFISGS---------CDTTVRLWDLRIT-SRAVRTYHGHEGDINSVKFFPDGQRF 264 (380)
T ss_dssp CSCEEEEEECSSSCCEEEEEE---------TTSCEEEEETTTT-CCCCEEECCCSSCCCEEEECTTSSEE
T ss_pred ccCeEEEEeecCCCCEEEEEE---------CCCeEEEEECCCC-CcceEEECCcCCCeEEEEEecCCCeE
Confidence 457899999988888777652 3689999999976 6787788764 589999999976544
No 52
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=95.06 E-value=0.045 Score=48.26 Aligned_cols=57 Identities=14% Similarity=0.141 Sum_probs=42.6
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCC-CCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQ-SPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~-S~V~~v~FsP~hPnL 231 (232)
..+|++|+|+|..+ ++|++- .+|.|.||++... .+...|... ..|+|++|+|....|
T Consensus 108 ~~~V~~~~~~p~~~-~l~s~s---------~Dg~i~vwd~~~~--~~~~~l~~h~~~V~~v~~~~~~~~l 165 (410)
T 1vyh_C 108 RSPVTRVIFHPVFS-VMVSAS---------EDATIKVWDYETG--DFERTLKGHTDSVQDISFDHSGKLL 165 (410)
T ss_dssp SSCEEEEEECSSSS-EEEEEE---------SSSCEEEEETTTC--CCCEEECCCSSCEEEEEECTTSSEE
T ss_pred CCcEEEEEEcCCCC-EEEEEe---------CCCeEEEEECCCC--cEEEEEeccCCcEEEEEEcCCCCEE
Confidence 35899999999765 443331 3689999999874 567777765 589999999976543
No 53
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=95.02 E-value=0.066 Score=44.13 Aligned_cols=61 Identities=18% Similarity=0.160 Sum_probs=45.1
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCC--C--CCCceEEeCCC----------CeEEEEecCC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFK--K--TTPEFEFFCQS----------PVLSCCFAKF 227 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~p--k--~~PEyvf~~~S----------~V~~v~FsP~ 227 (232)
....|++|+|+|....+|+++. .+|.|.||++... . ..+.+.|.+.. .|.+++|+|.
T Consensus 192 ~~~~i~~i~~~~~~~~~l~~~~---------~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 262 (342)
T 1yfq_A 192 LKYQIRDVALLPKEQEGYACSS---------IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPR 262 (342)
T ss_dssp CSSCEEEEEECSGGGCEEEEEE---------TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTT
T ss_pred CCCceeEEEECCCCCCEEEEEe---------cCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCC
Confidence 3457999999993345666653 2689999999773 0 26888888864 8999999997
Q ss_pred CCcC
Q psy17341 228 FFLY 231 (232)
Q Consensus 228 hPnL 231 (232)
...|
T Consensus 263 ~~~l 266 (342)
T 1yfq_A 263 HKFL 266 (342)
T ss_dssp TCCE
T ss_pred CCEE
Confidence 6544
No 54
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=94.99 E-value=0.052 Score=44.24 Aligned_cols=57 Identities=12% Similarity=0.052 Sum_probs=44.5
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hPnL 231 (232)
...|++|+|+|.-. +++++. .+|.|.+|++... .+...+..+..|.+++|+|....|
T Consensus 183 ~~~i~~~~~~~~~~-~l~~~~---------~dg~i~~~d~~~~--~~~~~~~~~~~v~~~~~s~~~~~l 239 (337)
T 1gxr_A 183 TDGASCIDISNDGT-KLWTGG---------LDNTVRSWDLREG--RQLQQHDFTSQIFSLGYCPTGEWL 239 (337)
T ss_dssp SSCEEEEEECTTSS-EEEEEE---------TTSEEEEEETTTT--EEEEEEECSSCEEEEEECTTSSEE
T ss_pred cCceEEEEECCCCC-EEEEEe---------cCCcEEEEECCCC--ceEeeecCCCceEEEEECCCCCEE
Confidence 45799999999654 444432 3689999999985 577778888999999999986544
No 55
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=94.98 E-value=0.037 Score=48.08 Aligned_cols=58 Identities=17% Similarity=0.295 Sum_probs=44.3
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCCCCcCC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKFFFLYA 232 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~hPnLI 232 (232)
...|++|+|+|. ..+||++. .+|.|.||++... .|.+.+.. ...|.+++|+|..++|+
T Consensus 217 ~~~v~~~~~~~~-~~~l~s~~---------~d~~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~p~~~~ll 275 (401)
T 4aez_A 217 SSEVCGLAWRSD-GLQLASGG---------NDNVVQIWDARSS--IPKFTKTNHNAAVKAVAWCPWQSNLL 275 (401)
T ss_dssp SSCEEEEEECTT-SSEEEEEE---------TTSCEEEEETTCS--SEEEEECCCSSCCCEEEECTTSTTEE
T ss_pred CCCeeEEEEcCC-CCEEEEEe---------CCCeEEEccCCCC--CccEEecCCcceEEEEEECCCCCCEE
Confidence 457999999994 34555542 3589999999984 67777754 56999999999888764
No 56
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=94.96 E-value=0.036 Score=48.34 Aligned_cols=58 Identities=14% Similarity=0.028 Sum_probs=42.4
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEE-eC-CCCeEEEEecCCCCcC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEF-FC-QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf-~~-~S~V~~v~FsP~hPnL 231 (232)
....|++|+|||.- .+||++- .+|.|.||++... .|...+ .. ...|++++|||.-..|
T Consensus 268 ~~~~V~~~~~Spdg-~~lasgs---------~D~~V~iwd~~~~--~~~~~~~~gH~~~V~~v~fSpdg~~l 327 (365)
T 4h5i_A 268 RFKGITSMDVDMKG-ELAVLAS---------NDNSIALVKLKDL--SMSKIFKQAHSFAITEVTISPDSTYV 327 (365)
T ss_dssp SCSCEEEEEECTTS-CEEEEEE---------TTSCEEEEETTTT--EEEEEETTSSSSCEEEEEECTTSCEE
T ss_pred CCCCeEeEEECCCC-CceEEEc---------CCCEEEEEECCCC--cEEEEecCcccCCEEEEEECCCCCEE
Confidence 34679999999964 4565542 3689999999884 566654 44 4689999999976544
No 57
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=94.92 E-value=0.045 Score=46.60 Aligned_cols=57 Identities=23% Similarity=0.195 Sum_probs=41.3
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~hPnL 231 (232)
...|++|+|+|... ++|.+ + .+|.|.||++... .+...|.. ...|.+++|+|....|
T Consensus 76 ~~~V~~~~~~~~~~-~l~s~-s--------~D~~v~lwd~~~~--~~~~~~~~h~~~v~~v~~sp~~~~l 133 (343)
T 2xzm_R 76 NHFVSDLALSQENC-FAISS-S--------WDKTLRLWDLRTG--TTYKRFVGHQSEVYSVAFSPDNRQI 133 (343)
T ss_dssp SSCEEEEEECSSTT-EEEEE-E--------TTSEEEEEETTSS--CEEEEEECCCSCEEEEEECSSTTEE
T ss_pred CCceEEEEECCCCC-EEEEE-c--------CCCcEEEEECCCC--cEEEEEcCCCCcEEEEEECCCCCEE
Confidence 45799999998654 33322 1 3699999999875 46566665 5699999999976544
No 58
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=94.91 E-value=0.039 Score=49.36 Aligned_cols=58 Identities=10% Similarity=0.123 Sum_probs=44.5
Q ss_pred CCcceeEeecCCC---------CCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCCCC
Q psy17341 162 KNRNVTYMDWSTQ---------HPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKFFF 229 (232)
Q Consensus 162 K~R~VT~IdWsP~---------~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~hP 229 (232)
....|++|+|+|. ...+||++. .+|.|.||++... ..+-..+.. .+.|++++|+|...
T Consensus 530 h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~---------~dg~i~iw~~~~~-~~~~~~~~~h~~~v~~l~~s~~~~ 597 (615)
T 1pgu_A 530 RTSKINAISWKPAEKGANEEEIEEDLVATGS---------LDTNIFIYSVKRP-MKIIKALNAHKDGVNNLLWETPST 597 (615)
T ss_dssp CSSCEEEEEECCCC------CCSCCEEEEEE---------TTSCEEEEESSCT-TCCEEETTSSTTCEEEEEEEETTE
T ss_pred CCCceeEEEEcCccccccccccCCCEEEEEc---------CCCcEEEEECCCC-ceechhhhcCccceEEEEEcCCCC
Confidence 4568999999994 455666553 3689999999986 566666665 46999999999876
No 59
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=94.80 E-value=0.081 Score=46.64 Aligned_cols=57 Identities=18% Similarity=0.035 Sum_probs=42.3
Q ss_pred cceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCC-CCeEEEEecCCCCcCC
Q psy17341 164 RNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQ-SPVLSCCFAKFFFLYA 232 (232)
Q Consensus 164 R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~-S~V~~v~FsP~hPnLI 232 (232)
..|++|+|+|.-.-|+.++ .+|.|.||+++.. .+...+... ..|++++|+|..+.|+
T Consensus 339 ~~v~~v~~~~~g~~l~s~s----------~D~~i~vwd~~~~--~~~~~~~~h~~~v~~l~~~~~~~~l~ 396 (410)
T 1vyh_C 339 NWVRGVLFHSGGKFILSCA----------DDKTLRVWDYKNK--RCMKTLNAHEHFVTSLDFHKTAPYVV 396 (410)
T ss_dssp SCEEEEEECSSSSCEEEEE----------TTTEEEEECCTTS--CCCEEEECCSSCEEEEEECSSSSCEE
T ss_pred CcEEEEEEcCCCCEEEEEe----------CCCeEEEEECCCC--ceEEEEcCCCCcEEEEEEcCCCCEEE
Confidence 4688999998655444332 3699999999875 566777664 5899999999987653
No 60
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=94.80 E-value=0.077 Score=43.24 Aligned_cols=58 Identities=17% Similarity=0.177 Sum_probs=44.1
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCCcC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hPnL 231 (232)
....|++|+|+|... +++++- .+|.|.+|++... .+.+.+.....|.++.|+|....|
T Consensus 264 ~~~~v~~~~~~~~~~-~l~~~~---------~dg~i~~~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l 321 (337)
T 1gxr_A 264 HESCVLSLKFAYCGK-WFVSTG---------KDNLLNAWRTPYG--ASIFQSKESSSVLSCDISVDDKYI 321 (337)
T ss_dssp CSSCEEEEEECTTSS-EEEEEE---------TTSEEEEEETTTC--CEEEEEECSSCEEEEEECTTSCEE
T ss_pred CccceeEEEECCCCC-EEEEec---------CCCcEEEEECCCC--eEEEEecCCCcEEEEEECCCCCEE
Confidence 345799999999655 443332 3589999999985 566777788999999999986544
No 61
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=94.79 E-value=0.054 Score=47.27 Aligned_cols=57 Identities=14% Similarity=0.178 Sum_probs=43.6
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hPnL 231 (232)
...|++|+|+|...-|+.++ .+|.|.||++... .....+.....|.+++|+|.+.++
T Consensus 165 ~~~v~~~~~~p~~~~l~s~s----------~d~~v~iwd~~~~--~~~~~~~~~~~v~~~~~~~~~~~~ 221 (393)
T 1erj_A 165 EQDIYSLDYFPSGDKLVSGS----------GDRTVRIWDLRTG--QCSLTLSIEDGVTTVAVSPGDGKY 221 (393)
T ss_dssp SSCEEEEEECTTSSEEEEEE----------TTSEEEEEETTTT--EEEEEEECSSCEEEEEECSTTCCE
T ss_pred CCCEEEEEEcCCCCEEEEec----------CCCcEEEEECCCC--eeEEEEEcCCCcEEEEEECCCCCE
Confidence 45799999999765443322 3689999999874 567778888899999999976654
No 62
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=94.64 E-value=0.099 Score=42.21 Aligned_cols=55 Identities=9% Similarity=0.026 Sum_probs=41.9
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCC-CeEEEEecCCCC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQS-PVLSCCFAKFFF 229 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S-~V~~v~FsP~hP 229 (232)
....|++|+|+|.. .|++++ .+|.|.+|++... .+...+..+. .|.+++|+|...
T Consensus 224 ~~~~i~~~~~~~~~-~l~~~~----------~dg~v~iwd~~~~--~~~~~~~~~~~~i~~~~~~~~~~ 279 (313)
T 3odt_A 224 HESFVYCIKLLPNG-DIVSCG----------EDRTVRIWSKENG--SLKQVITLPAISIWSVDCMSNGD 279 (313)
T ss_dssp CSSCEEEEEECTTS-CEEEEE----------TTSEEEEECTTTC--CEEEEEECSSSCEEEEEECTTSC
T ss_pred CCceEEEEEEecCC-CEEEEe----------cCCEEEEEECCCC--ceeEEEeccCceEEEEEEccCCC
Confidence 34579999999976 344332 3689999999985 5777777665 999999999764
No 63
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=94.64 E-value=0.074 Score=43.64 Aligned_cols=54 Identities=13% Similarity=0.191 Sum_probs=43.0
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFF 228 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~h 228 (232)
...|++|+|+|.-. +||++- .+|.|.||++... .+.+.+.....|.++.|+|..
T Consensus 215 ~~~v~~~~~s~~~~-~l~s~s---------~Dg~i~iwd~~~~--~~~~~~~~~~~v~~~~~~~~~ 268 (340)
T 4aow_A 215 TGYLNTVTVSPDGS-LCASGG---------KDGQAMLWDLNEG--KHLYTLDGGDIINALCFSPNR 268 (340)
T ss_dssp SSCEEEEEECTTSS-EEEEEE---------TTCEEEEEETTTT--EEEEEEECSSCEEEEEECSSS
T ss_pred CCcEEEEEECCCCC-EEEEEe---------CCCeEEEEEeccC--ceeeeecCCceEEeeecCCCC
Confidence 45799999998644 555431 3689999999985 688889999999999999864
No 64
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=94.62 E-value=0.06 Score=46.52 Aligned_cols=57 Identities=11% Similarity=0.088 Sum_probs=42.5
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcE-EEEEeCCCCCCCCceEEe---CCCCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGV-CLIWNTKFKKTTPEFEFF---CQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~Gl-VlvWslk~pk~~PEyvf~---~~S~V~~v~FsP~hPnL 231 (232)
...|++|+|||.- .+||.+- .+|. |.||++... .+.+.|. -...|.+++|+|....|
T Consensus 195 ~~~v~~~~~s~~g-~~l~s~s---------~d~~~v~iwd~~~~--~~~~~~~~g~h~~~v~~~~~s~~~~~l 255 (355)
T 3vu4_A 195 TNPIKMVRLNRKS-DMVATCS---------QDGTIIRVFKTEDG--VLVREFRRGLDRADVVDMKWSTDGSKL 255 (355)
T ss_dssp SSCEEEEEECTTS-SEEEEEE---------TTCSEEEEEETTTC--CEEEEEECTTCCSCEEEEEECTTSCEE
T ss_pred CCceEEEEECCCC-CEEEEEe---------CCCCEEEEEECCCC--cEEEEEEcCCCCCcEEEEEECCCCCEE
Confidence 4579999999953 4554431 3685 999999984 5777777 56799999999976544
No 65
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=94.56 E-value=0.055 Score=44.80 Aligned_cols=58 Identities=16% Similarity=0.127 Sum_probs=41.5
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCCCCcC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~hPnL 231 (232)
-...|++|+|+|.-. +||++- .+|.|.||++... .....+.. ..+|.+++|+|....|
T Consensus 22 h~~~v~~~~~s~~~~-~l~s~~---------~dg~i~iw~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l 80 (312)
T 4ery_A 22 HTKAVSSVKFSPNGE-WLASSS---------ADKLIKIWGAYDG--KFEKTISGHKLGISDVAWSSDSNLL 80 (312)
T ss_dssp CSSCEEEEEECTTSS-EEEEEE---------TTSCEEEEETTTC--CEEEEECCCSSCEEEEEECTTSSEE
T ss_pred cCCcEEEEEECCCCC-EEEEee---------CCCeEEEEeCCCc--ccchhhccCCCceEEEEEcCCCCEE
Confidence 346899999999644 554431 3689999999875 35555554 4589999999976543
No 66
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=94.55 E-value=0.076 Score=43.93 Aligned_cols=57 Identities=19% Similarity=0.289 Sum_probs=42.2
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~hPnL 231 (232)
...|++|+|+|.. .+||++- .+|.|.||++... .+...+.. ...|.|+.|+|....|
T Consensus 65 ~~~v~~~~~~~~~-~~l~s~~---------~d~~i~vwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l 122 (312)
T 4ery_A 65 KLGISDVAWSSDS-NLLVSAS---------DDKTLKIWDVSSG--KCLKTLKGHSNYVFCCNFNPQSNLI 122 (312)
T ss_dssp SSCEEEEEECTTS-SEEEEEE---------TTSEEEEEETTTC--CEEEEEECCSSCEEEEEECSSSSEE
T ss_pred CCceEEEEEcCCC-CEEEEEC---------CCCEEEEEECCCC--cEEEEEcCCCCCEEEEEEcCCCCEE
Confidence 4579999999964 4554431 3689999999874 56666665 4589999999976543
No 67
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=94.53 E-value=0.056 Score=47.09 Aligned_cols=56 Identities=13% Similarity=0.014 Sum_probs=43.1
Q ss_pred ceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCCc
Q psy17341 165 NVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFFL 230 (232)
Q Consensus 165 ~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hPn 230 (232)
.|.+|+|||.- .++|++-|+ .+|.|.||+++.. .+.+.+.....|.+++|+|..-.
T Consensus 135 ~~~~v~fSpDg-~~la~as~~-------~d~~i~iwd~~~~--~~~~~~~~~~~V~~v~fspdg~~ 190 (365)
T 4h5i_A 135 YTKLVYISREG-TVAAIASSK-------VPAIMRIIDPSDL--TEKFEIETRGEVKDLHFSTDGKV 190 (365)
T ss_dssp CEEEEEECTTS-SCEEEEESC-------SSCEEEEEETTTT--EEEEEEECSSCCCEEEECTTSSE
T ss_pred CEEEEEEcCCC-CEEEEEECC-------CCCEEEEeECCCC--cEEEEeCCCCceEEEEEccCCce
Confidence 47889999864 345554443 3699999999984 68888888899999999997543
No 68
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=94.51 E-value=0.12 Score=43.55 Aligned_cols=59 Identities=15% Similarity=0.258 Sum_probs=39.8
Q ss_pred cceeEeecCCCC---CCeEEEEeccCCCCCCCCCcEEEEEeCCCCC--C-CCceEEeCCCCeEEEEecCCCCcC
Q psy17341 164 RNVTYMDWSTQH---PELLLASYHRNKEAPNEPDGVCLIWNTKFKK--T-TPEFEFFCQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 164 R~VT~IdWsP~~---~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk--~-~PEyvf~~~S~V~~v~FsP~hPnL 231 (232)
..|++|+|+|.. ..+||.+ + .+|.|.||++.... . .+..+-.-...|.+++|+|....|
T Consensus 213 ~~V~~v~~sp~~~~~~~~las~-s--------~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~l 277 (316)
T 3bg1_A 213 DWVRDVAWAPSIGLPTSTIASC-S--------QDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANIL 277 (316)
T ss_dssp SCEEEEECCCCSSCSCCEEEEE-E--------TTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCE
T ss_pred CceEEEEecCCCCCCCceEEEE-c--------CCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEE
Confidence 469999999976 2344432 2 36999999998631 1 123333346799999999986654
No 69
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=94.50 E-value=0.073 Score=45.32 Aligned_cols=57 Identities=25% Similarity=0.375 Sum_probs=40.5
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~hPnL 231 (232)
...|++|+|+|... ++|.+- .+|.|.||++... .+...+.. ...|++++|+|....|
T Consensus 55 ~~~v~~~~~s~d~~-~l~s~s---------~Dg~v~iWd~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l 112 (340)
T 1got_B 55 LAKIYAMHWGTDSR-LLLSAS---------QDGKLIIWDSYTT--NKVHAIPLRSSWVMTCAYAPSGNYV 112 (340)
T ss_dssp SSCEEEEEECTTSS-EEEEEE---------TTTEEEEEETTTC--CEEEEEECSSSCEEEEEECTTSSEE
T ss_pred CCceEEEEECCCCC-EEEEEe---------CCCcEEEEECCCC--CcceEeecCCccEEEEEECCCCCEE
Confidence 35899999998654 444331 3699999999875 34555554 4589999999975443
No 70
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=94.43 E-value=0.04 Score=44.56 Aligned_cols=57 Identities=14% Similarity=0.145 Sum_probs=41.3
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hPnL 231 (232)
...|++|+| |. ..+||++. .+|.|.||++... ..+..+......|.+++|+|....|
T Consensus 18 ~~~v~~~~~-~~-~~~l~s~~---------~dg~v~vw~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l 74 (313)
T 3odt_A 18 DQDVRDVVA-VD-DSKVASVS---------RDGTVRLWSKDDQ-WLGTVVYTGQGFLNSVCYDSEKELL 74 (313)
T ss_dssp SSCEEEEEE-EE-TTEEEEEE---------TTSEEEEEEESSS-EEEEEEEECSSCEEEEEEETTTTEE
T ss_pred CCCcEEEEe-cC-CCEEEEEE---------cCCcEEEEECCCC-EEEEEeecCCccEEEEEECCCCCEE
Confidence 458999999 54 44555442 3699999999775 4455555557899999999976543
No 71
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=94.42 E-value=0.027 Score=56.17 Aligned_cols=56 Identities=11% Similarity=0.163 Sum_probs=43.8
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCC-------------------CCeEEEE
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQ-------------------SPVLSCC 223 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~-------------------S~V~~v~ 223 (232)
...|++|+|||....++|+++. +|.| ||+++.. .+...|... ..|++++
T Consensus 151 ~~~V~sl~~sp~~~~~l~~g~~---------dg~v-lWd~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~ 218 (902)
T 2oaj_A 151 LSPIVSIQWNPRDIGTVLISYE---------YVTL-TYSLVEN--EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSL 218 (902)
T ss_dssp CCCCCEEEEETTEEEEEEEECS---------SCEE-EEETTTT--EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEE
T ss_pred CCCeEEEEEccCCCCEEEEEeC---------CCcE-EEECCCC--ceEEEEecccCCcCCCcccccccccccCCCeEEEE
Confidence 3479999999988788888753 4899 9999874 566666544 5799999
Q ss_pred ecCCCCc
Q psy17341 224 FAKFFFL 230 (232)
Q Consensus 224 FsP~hPn 230 (232)
|+|.-..
T Consensus 219 fspdg~~ 225 (902)
T 2oaj_A 219 YHPNSLH 225 (902)
T ss_dssp ECTTSSE
T ss_pred EcCCCCE
Confidence 9997543
No 72
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=94.41 E-value=0.096 Score=44.81 Aligned_cols=61 Identities=13% Similarity=0.156 Sum_probs=41.3
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCC--CCCCceEEe-----C-CCCeEEEEecCCCCcCC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFK--KTTPEFEFF-----C-QSPVLSCCFAKFFFLYA 232 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~p--k~~PEyvf~-----~-~S~V~~v~FsP~hPnLI 232 (232)
..+.|.+|+|+|...-|+.++ .+|.|.||+.... +..|.+.+. . ...|.|++|||..|++|
T Consensus 251 h~~~v~~v~~~~~~~~l~s~~----------~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l 319 (345)
T 3fm0_A 251 HSRTIYDIAWCQLTGALATAC----------GDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLL 319 (345)
T ss_dssp CSSCEEEEEECTTTCCEEEEE----------TTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEE
T ss_pred CCCcEEEEEEecCCCEEEEEe----------CCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEE
Confidence 346799999999765444332 3588999987653 134444332 1 45899999999988653
No 73
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=94.39 E-value=0.035 Score=45.81 Aligned_cols=57 Identities=16% Similarity=0.204 Sum_probs=42.2
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCC---CCceEEeCCCCeEEEEecCCCC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKT---TPEFEFFCQSPVLSCCFAKFFF 229 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~---~PEyvf~~~S~V~~v~FsP~hP 229 (232)
-...|++|+|+|. ..+||++. .+|.|.||++... . .+..++.....|+|++|+|...
T Consensus 10 h~~~v~~~~~s~~-~~~l~~~~---------~d~~v~iw~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~ 69 (342)
T 1yfq_A 10 PKDYISDIKIIPS-KSLLLITS---------WDGSLTVYKFDIQ-AKNVDLLQSLRYKHPLLCCNFIDNTD 69 (342)
T ss_dssp CSSCEEEEEEEGG-GTEEEEEE---------TTSEEEEEEEETT-TTEEEEEEEEECSSCEEEEEEEESSS
T ss_pred CCCcEEEEEEcCC-CCEEEEEc---------CCCeEEEEEeCCC-CccccceeeeecCCceEEEEECCCCC
Confidence 3458999999995 34555542 3589999999875 3 2556666678999999999754
No 74
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=94.36 E-value=0.09 Score=43.88 Aligned_cols=59 Identities=14% Similarity=0.245 Sum_probs=40.2
Q ss_pred CcceeEeecCCCC--CCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCC--ceEE---eCCCCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQH--PELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTP--EFEF---FCQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~--~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~P--Eyvf---~~~S~V~~v~FsP~hPnL 231 (232)
...|++|+|+|.. ..+||.+ + .+|.|.||++... ..| ..++ .-+..|.+++|+|....|
T Consensus 204 ~~~V~~v~~sp~~~~~~~las~-s--------~D~~v~iWd~~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 269 (297)
T 2pm7_B 204 SDWVRDVAWSPTVLLRSYMASV-S--------QDRTCIIWTQDNE-QGPWKKTLLKEEKFPDVLWRASWSLSGNVL 269 (297)
T ss_dssp SSCEEEEEECCCCSSSEEEEEE-E--------TTSCEEEEEESST-TSCCEEEESSSSCCSSCEEEEEECSSSCCE
T ss_pred CCceEEEEECCCCCCceEEEEE-E--------CCCcEEEEEeCCC-CCccceeeeecccCCCcEEEEEECCCCCEE
Confidence 3479999999986 3455443 2 3689999999875 322 1233 125689999999986654
No 75
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=94.32 E-value=0.097 Score=49.19 Aligned_cols=56 Identities=16% Similarity=0.236 Sum_probs=41.0
Q ss_pred cceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEE--EecCCCCcC
Q psy17341 164 RNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSC--CFAKFFFLY 231 (232)
Q Consensus 164 R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v--~FsP~hPnL 231 (232)
..|+|++|+|. ++||++. .+|.|.+|++..+ ..|-..+.. ..+|+++ .|+|.-+++
T Consensus 267 ~~v~sv~~s~~--~~lasgs---------~DgtV~lWD~~~~-~~~~~~~~~H~~~V~sv~~~~s~~g~~~ 325 (524)
T 2j04_B 267 SLITTFDFLSP--TTVVCGF---------KNGFVAEFDLTDP-EVPSFYDQVHDSYILSVSTAYSDFEDTV 325 (524)
T ss_dssp TCEEEEEESSS--SEEEEEE---------TTSEEEEEETTBC-SSCSEEEECSSSCEEEEEEECCTTSCCE
T ss_pred CCEEEEEecCC--CeEEEEe---------CCCEEEEEECCCC-CCceEEeecccccEEEEEEEcCCCCCeE
Confidence 57999999973 5666653 3699999999986 678777765 4689999 455542254
No 76
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.24 E-value=0.11 Score=48.85 Aligned_cols=60 Identities=8% Similarity=0.089 Sum_probs=44.6
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCC---CCCceEEeCC-CCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKK---TTPEFEFFCQ-SPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk---~~PEyvf~~~-S~V~~v~FsP~hPnL 231 (232)
...|++|+|+|...++||.+- .+|.|.||++.... ..+...+..+ ..|.|++|+|....|
T Consensus 382 ~~~V~~v~~~~~~~~~l~s~s---------~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l 445 (694)
T 3dm0_A 382 TDMVTAIATPIDNADIIVSAS---------RDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFA 445 (694)
T ss_dssp SSCEEEEECCTTCCSEEEEEE---------TTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEE
T ss_pred CceeEEEEecCCCCCEEEEEe---------CCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEE
Confidence 458999999999999887652 36899999997641 1234556654 589999999976544
No 77
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.09 E-value=0.056 Score=50.71 Aligned_cols=58 Identities=19% Similarity=0.257 Sum_probs=42.6
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEe-CCCCeEEEEecCCCCcC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFF-CQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~-~~S~V~~v~FsP~hPnL 231 (232)
....|++|+|||.-+ ++|++. .+|.|.||++... .+...+. ...+|.+++|+|....|
T Consensus 12 h~~~v~~i~~sp~~~-~la~~~---------~~g~v~iwd~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l 70 (814)
T 3mkq_A 12 RSDRVKGIDFHPTEP-WVLTTL---------YSGRVEIWNYETQ--VEVRSIQVTETPVRAGKFIARKNWI 70 (814)
T ss_dssp ECSCEEEEEECSSSS-EEEEEE---------TTSEEEEEETTTT--EEEEEEECCSSCEEEEEEEGGGTEE
T ss_pred CCCceEEEEECCCCC-EEEEEe---------CCCEEEEEECCCC--ceEEEEecCCCcEEEEEEeCCCCEE
Confidence 345799999999654 555553 2589999999875 3545555 46799999999976544
No 78
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=94.01 E-value=0.22 Score=42.51 Aligned_cols=54 Identities=19% Similarity=0.376 Sum_probs=42.1
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEe--CCCCeEEEEecC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFF--CQSPVLSCCFAK 226 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~--~~S~V~~v~FsP 226 (232)
...|++|+|+|..+.+|+++. .+|.|.||++... ..|-..+. ....|.++.|++
T Consensus 290 ~~~v~~~~~~~~~~~~l~~g~---------~dg~i~vwd~~~~-~~~~~~~~~~~~~~v~~~~~~~ 345 (420)
T 3vl1_A 290 TCSCNSLTVDGNNANYIYAGY---------ENGMLAQWDLRSP-ECPVGEFLINEGTPINNVYFAA 345 (420)
T ss_dssp SSCEEEEEECSSCTTEEEEEE---------TTSEEEEEETTCT-TSCSEEEEESTTSCEEEEEEET
T ss_pred CCCceeEEEeCCCCCEEEEEe---------CCCeEEEEEcCCC-cCchhhhhccCCCCceEEEeCC
Confidence 357999999999887887764 3589999999997 67766665 456888887654
No 79
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=93.99 E-value=0.11 Score=45.90 Aligned_cols=58 Identities=7% Similarity=-0.046 Sum_probs=42.5
Q ss_pred ceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEe---CCCCeEEEEecCCCCcC
Q psy17341 165 NVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFF---CQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 165 ~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~---~~S~V~~v~FsP~hPnL 231 (232)
.|++|+|+|...-|+|++. .+|.|.||++......+...+. .+..|++++|+|....|
T Consensus 104 ~v~~~~~s~d~~~l~~~~~---------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l 164 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACAD---------SDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTV 164 (450)
T ss_dssp CEEEEEECTTSSEEEEEEG---------GGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEE
T ss_pred ceEEEEEcCCCCEEEEEEC---------CCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEE
Confidence 7999999998766655542 2589999999831135666663 35799999999976554
No 80
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=93.95 E-value=0.077 Score=45.11 Aligned_cols=60 Identities=13% Similarity=0.184 Sum_probs=37.9
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCC-----CCCceEEeC-CCCeEEEEecCCCCcC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKK-----TTPEFEFFC-QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk-----~~PEyvf~~-~S~V~~v~FsP~hPnL 231 (232)
-...|++|+|+|.. .+||++. .+|.|.||++..+. ..+..++.. ...|.+++|+|....|
T Consensus 57 h~~~v~~v~~sp~~-~~las~s---------~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l 122 (330)
T 2hes_X 57 HKKAIRSVAWRPHT-SLLAAGS---------FDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYL 122 (330)
T ss_dssp CCSCEEEEEECTTS-SEEEEEE---------TTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEE
T ss_pred ccCCEEEEEECCCC-CEEEEEe---------CCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEE
Confidence 34589999999974 4555442 36899999996421 123455554 3589999999975443
No 81
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=93.92 E-value=0.1 Score=43.94 Aligned_cols=59 Identities=8% Similarity=0.157 Sum_probs=36.9
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCC-CCCceEEeC-CCCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKK-TTPEFEFFC-QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk-~~PEyvf~~-~S~V~~v~FsP~hPnL 231 (232)
...|++|+|+|.-. +||++- .+|.|.||++...+ ..|...+.. ...|.+++|+|....|
T Consensus 55 ~~~v~~~~~s~~~~-~l~s~s---------~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 115 (377)
T 3dwl_C 55 DKIVTCVDWAPKSN-RIVTCS---------QDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKF 115 (377)
T ss_dssp SSCEEEEEECTTTC-CEEEEE---------TTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCC
T ss_pred CceEEEEEEeCCCC-EEEEEe---------CCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEE
Confidence 45799999999754 444432 36899999999862 235555544 5699999999965443
No 82
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=93.90 E-value=0.07 Score=45.51 Aligned_cols=57 Identities=16% Similarity=0.174 Sum_probs=40.9
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~hPnL 231 (232)
...|++|+|+|.-.-|+.++ .+|.|.||++... .+...|.. ...|.+++|+|....|
T Consensus 248 ~~~v~~~~~sp~~~~l~s~s----------~D~~v~iwd~~~~--~~~~~~~~h~~~v~~v~~s~~g~~l 305 (321)
T 3ow8_A 248 ASWVLNVAFCPDDTHFVSSS----------SDKSVKVWDVGTR--TCVHTFFDHQDQVWGVKYNGNGSKI 305 (321)
T ss_dssp SSCEEEEEECTTSSEEEEEE----------TTSCEEEEETTTT--EEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CCceEEEEECCCCCEEEEEe----------CCCcEEEEeCCCC--EEEEEEcCCCCcEEEEEECCCCCEE
Confidence 34699999999755333222 3689999999875 45556644 5699999999976544
No 83
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=93.88 E-value=0.052 Score=47.15 Aligned_cols=56 Identities=23% Similarity=0.370 Sum_probs=40.5
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCC-CCeEEEEecCCCCc
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQ-SPVLSCCFAKFFFL 230 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~-S~V~~v~FsP~hPn 230 (232)
...|++|+|+|.-.-|+.+| .+|.|.||++... .+...+... ..|++++|+|....
T Consensus 66 ~~~V~~~~~sp~~~~l~s~s----------~D~~v~iWd~~~~--~~~~~~~~h~~~v~~~~~s~~g~~ 122 (380)
T 3iz6_a 66 SGKVYSLDWTPEKNWIVSAS----------QDGRLIVWNALTS--QKTHAIKLHCPWVMECAFAPNGQS 122 (380)
T ss_dssp SSCEEEEEECTTSSCEEEEE----------TTSEEEEEETTTT--EEEEEEECCCTTCCCCEECTTSSE
T ss_pred ccEEEEEEEcCCCCEEEEEe----------CCCeEEEEECCCC--ccceEEecCCCCEEEEEECCCCCE
Confidence 35799999999654343332 3799999999874 456666654 47999999997543
No 84
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=93.83 E-value=0.14 Score=45.87 Aligned_cols=55 Identities=15% Similarity=0.127 Sum_probs=40.7
Q ss_pred cceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCC-CCeEEEEecCCCCcC
Q psy17341 164 RNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQ-SPVLSCCFAKFFFLY 231 (232)
Q Consensus 164 R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~-S~V~~v~FsP~hPnL 231 (232)
..|+||+|||.- .+||++- .+|.|.||+.. ..+...|... ..|+|++|+|....|
T Consensus 17 ~~V~~~a~spdg-~~las~~---------~d~~v~iWd~~---~~~~~~l~gh~~~V~~l~fspdg~~l 72 (577)
T 2ymu_A 17 SSVRGVAFSPDG-QTIASAS---------DDKTVKLWNRN---GQLLQTLTGHSSSVWGVAFSPDGQTI 72 (577)
T ss_dssp SCEEEEEECTTS-SCEEEEE---------TTSEEEEECTT---SCEEEEEECCSSCEEEEEECTTSSEE
T ss_pred CcEEEEEECCCC-CEEEEEe---------CCCEEEEEECC---CCEEEEEeCCCCCEEEEEECCCCCEE
Confidence 479999999954 3555541 36899999953 4577777764 599999999976544
No 85
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=93.82 E-value=0.069 Score=45.58 Aligned_cols=57 Identities=18% Similarity=0.194 Sum_probs=41.7
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCC-CCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQ-SPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~-S~V~~v~FsP~hPnL 231 (232)
...|++|+|+|.-. +||++ ..+|.|.||++... .+...+... ..|++++|+|....|
T Consensus 206 ~~~v~~l~~spd~~-~l~s~---------s~dg~i~iwd~~~~--~~~~~~~~h~~~v~~~~~sp~~~~l 263 (321)
T 3ow8_A 206 AMPIRSLTFSPDSQ-LLVTA---------SDDGYIKIYDVQHA--NLAGTLSGHASWVLNVAFCPDDTHF 263 (321)
T ss_dssp SSCCCEEEECTTSC-EEEEE---------CTTSCEEEEETTTC--CEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CCceeEEEEcCCCC-EEEEE---------cCCCeEEEEECCCc--ceeEEEcCCCCceEEEEECCCCCEE
Confidence 45799999999644 44443 13689999999875 455666654 579999999987654
No 86
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=93.77 E-value=0.12 Score=43.09 Aligned_cols=56 Identities=20% Similarity=0.269 Sum_probs=40.4
Q ss_pred CcceeEeecCCC-CCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCC
Q psy17341 163 NRNVTYMDWSTQ-HPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKF 227 (232)
Q Consensus 163 ~R~VT~IdWsP~-~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~ 227 (232)
...|++|+|+|. +..+||.+- .+|.|.||++...+..+...+.. ...|.+++|+|.
T Consensus 53 ~~~V~~v~~s~~~~g~~l~s~s---------~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~ 110 (297)
T 2pm7_B 53 EGPVWRVDWAHPKFGTILASCS---------YDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPH 110 (297)
T ss_dssp SSCEEEEEECCGGGCSEEEEEE---------TTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCG
T ss_pred cCCeEEEEecCCCcCCEEEEEc---------CCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcC
Confidence 358999999864 456666542 36899999998752235555554 468999999997
No 87
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=93.76 E-value=0.095 Score=45.21 Aligned_cols=55 Identities=22% Similarity=0.439 Sum_probs=39.0
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCCCC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKFFF 229 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~hP 229 (232)
...|+||+|+|... +||.+ + .+|.|.||+.... .....+.. ...|++++|+|...
T Consensus 64 ~~~V~~~~~s~d~~-~l~s~-s--------~Dg~v~vWd~~~~--~~~~~~~~~~~~v~~~~~sp~g~ 119 (354)
T 2pbi_B 64 GNKVLCMDWCKDKR-RIVSS-S--------QDGKVIVWDSFTT--NKEHAVTMPCTWVMACAYAPSGC 119 (354)
T ss_dssp SSCEEEEEECTTSS-EEEEE-E--------TTSEEEEEETTTC--CEEEEEECSSSCCCEEEECTTSS
T ss_pred CCeEEEEEECCCCC-EEEEE-e--------CCCeEEEEECCCC--CcceEEecCCCCEEEEEECCCCC
Confidence 34799999999754 44433 1 3799999998764 34444444 45899999999754
No 88
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=93.71 E-value=0.096 Score=49.22 Aligned_cols=56 Identities=5% Similarity=-0.012 Sum_probs=39.7
Q ss_pred ceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCCCCcCC
Q psy17341 165 NVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKFFFLYA 232 (232)
Q Consensus 165 ~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~hPnLI 232 (232)
.|++|+|||.-.- ||++- .++.|.||+++.. . ....|.. ...|++++|||.++.|+
T Consensus 357 ~v~~v~fsp~~~~-l~s~~---------~d~tv~lwd~~~~-~-~~~~l~gH~~~V~sva~Sp~g~~l~ 413 (524)
T 2j04_B 357 NLVPVVYCPQIYS-YIYSD---------GASSLRAVPSRAA-F-AVHPLVSRETTITAIGVSRLHPMVL 413 (524)
T ss_dssp SCCCEEEETTTTE-EEEEC---------SSSEEEEEETTCT-T-CCEEEEECSSCEEEEECCSSCCBCE
T ss_pred cccceEeCCCcCe-EEEeC---------CCCcEEEEECccc-c-cceeeecCCCceEEEEeCCCCCeEE
Confidence 4899999997544 33321 2468999999985 3 3344443 56999999999998763
No 89
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=93.67 E-value=0.067 Score=50.18 Aligned_cols=58 Identities=9% Similarity=-0.018 Sum_probs=43.5
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCCCCcC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~hPnL 231 (232)
....|++++|+|... +||++. .+|.|.||++... .+...+.. ...|.+++|+|..+.|
T Consensus 54 ~~~~v~~~~~s~~~~-~l~~~~---------~dg~i~vw~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l 112 (814)
T 3mkq_A 54 TETPVRAGKFIARKN-WIIVGS---------DDFRIRVFNYNTG--EKVVDFEAHPDYIRSIAVHPTKPYV 112 (814)
T ss_dssp CSSCEEEEEEEGGGT-EEEEEE---------TTSEEEEEETTTC--CEEEEEECCSSCEEEEEECSSSSEE
T ss_pred CCCcEEEEEEeCCCC-EEEEEe---------CCCeEEEEECCCC--cEEEEEecCCCCEEEEEEeCCCCEE
Confidence 456899999999654 455442 2689999999875 45556664 5689999999998765
No 90
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=93.64 E-value=0.12 Score=43.92 Aligned_cols=55 Identities=20% Similarity=0.192 Sum_probs=40.8
Q ss_pred ceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCCCCcC
Q psy17341 165 NVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 165 ~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~hPnL 231 (232)
.|++|+|+|.-. ++|++. .+|.|.||++... .+...+.. ...|.|++|+|....|
T Consensus 272 ~v~~~~~s~~g~-~l~~g~---------~d~~i~vwd~~~~--~~~~~~~~h~~~v~~~~~s~dg~~l 327 (340)
T 1got_B 272 GITSVSFSKSGR-LLLAGY---------DDFNCNVWDALKA--DRAGVLAGHDNRVSCLGVTDDGMAV 327 (340)
T ss_dssp CEEEEEECTTSS-EEEEEE---------TTSEEEEEETTTC--CEEEEEECCSSCEEEEEECTTSSCE
T ss_pred ceEEEEECCCCC-EEEEEC---------CCCeEEEEEcccC--cEeeEeecCCCcEEEEEEcCCCCEE
Confidence 699999999654 555543 3589999999875 45566665 4699999999976544
No 91
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=93.43 E-value=0.087 Score=45.06 Aligned_cols=59 Identities=20% Similarity=0.192 Sum_probs=39.9
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCC-CCeEEEEecCCCCc
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQ-SPVLSCCFAKFFFL 230 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~-S~V~~v~FsP~hPn 230 (232)
-...|++|+|+|.- .+||++- .+|.|.||++......+...|... ..|.+++|+|....
T Consensus 60 h~~~v~~~~~sp~g-~~l~s~s---------~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~ 119 (345)
T 3fm0_A 60 HQRTVRKVAWSPCG-NYLASAS---------FDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNL 119 (345)
T ss_dssp CSSCEEEEEECTTS-SEEEEEE---------TTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSE
T ss_pred cCCcEEEEEECCCC-CEEEEEE---------CCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCE
Confidence 34689999999964 3444431 368999999876411234455543 58999999997543
No 92
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=93.37 E-value=0.18 Score=43.38 Aligned_cols=58 Identities=14% Similarity=0.147 Sum_probs=43.5
Q ss_pred CcceeEeecCCCCC-CeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHP-ELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~-eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~hPnL 231 (232)
...|++++|+|... .+|+.+. .+|.|.+|++... .+...|.. ...|.+++|+|....|
T Consensus 196 ~~~v~~~~~~~~~~g~~l~sgs---------~Dg~v~~wd~~~~--~~~~~~~~h~~~v~~v~~~p~~~~l 255 (354)
T 2pbi_B 196 GADVLCLDLAPSETGNTFVSGG---------CDKKAMVWDMRSG--QCVQAFETHESDVNSVRYYPSGDAF 255 (354)
T ss_dssp SSCEEEEEECCCSSCCEEEEEE---------TTSCEEEEETTTC--CEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CCCeEEEEEEeCCCCCEEEEEe---------CCCeEEEEECCCC--cEEEEecCCCCCeEEEEEeCCCCEE
Confidence 45799999999764 5665542 3689999999885 56677765 4689999999976543
No 93
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=93.32 E-value=0.14 Score=43.04 Aligned_cols=57 Identities=14% Similarity=0.229 Sum_probs=43.1
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCCCCcC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~hPnL 231 (232)
....|++|+|+|.. +++++. .+|.|.+|++... .+...+.. ..+|.+++|+|....|
T Consensus 288 ~~~~i~~~~~~~~~--~l~~~~---------~d~~i~i~d~~~~--~~~~~~~~~~~~i~~~~~s~~~~~l 345 (425)
T 1r5m_A 288 HSQSIVSASWVGDD--KVISCS---------MDGSVRLWSLKQN--TLLALSIVDGVPIFAGRISQDGQKY 345 (425)
T ss_dssp CSSCEEEEEEETTT--EEEEEE---------TTSEEEEEETTTT--EEEEEEECTTCCEEEEEECTTSSEE
T ss_pred CCccEEEEEECCCC--EEEEEe---------CCCcEEEEECCCC--cEeEecccCCccEEEEEEcCCCCEE
Confidence 45689999999976 555442 2589999999885 46666765 5799999999976544
No 94
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=93.31 E-value=0.14 Score=43.21 Aligned_cols=58 Identities=17% Similarity=0.155 Sum_probs=37.8
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCC--CceEEe--CCCCeEEEEecCCCCc
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTT--PEFEFF--CQSPVLSCCFAKFFFL 230 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~--PEyvf~--~~S~V~~v~FsP~hPn 230 (232)
-...|++|+|+|.-. +||++. .+|.|.+|++... .. ....+. ....|++++|+|....
T Consensus 99 ~~~~v~~~~~~~~~~-~l~~~~---------~d~~i~iwd~~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 160 (377)
T 3dwl_C 99 LNRAATFVRWSPNED-KFAVGS---------GARVISVCYFEQE-NDWWVSKHLKRPLRSTILSLDWHPNNVL 160 (377)
T ss_dssp CSSCEEEEECCTTSS-CCEEEE---------SSSCEEECCC------CCCCEEECSSCCSCEEEEEECTTSSE
T ss_pred cCCceEEEEECCCCC-EEEEEe---------cCCeEEEEEECCc-ccceeeeEeecccCCCeEEEEEcCCCCE
Confidence 355899999999644 444332 2578999999885 32 345555 3679999999996543
No 95
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=93.25 E-value=0.12 Score=42.94 Aligned_cols=55 Identities=13% Similarity=0.022 Sum_probs=42.0
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCC-CeEEEEecCCCC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQS-PVLSCCFAKFFF 229 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S-~V~~v~FsP~hP 229 (232)
...|++|+|+|... +|+++. .+|.|.+|++... .+...+.... +|.+++|+|...
T Consensus 202 ~~~v~~~~~~~~~~-~l~~~~---------~d~~i~i~d~~~~--~~~~~~~~~~~~v~~~~~~~~~~ 257 (372)
T 1k8k_C 202 CGWVHGVCFSANGS-RVAWVS---------HDSTVCLADADKK--MAVATLASETLPLLAVTFITESS 257 (372)
T ss_dssp SSCEEEEEECSSSS-EEEEEE---------TTTEEEEEEGGGT--TEEEEEECSSCCEEEEEEEETTE
T ss_pred CCeEEEEEECCCCC-EEEEEe---------CCCEEEEEECCCC--ceeEEEccCCCCeEEEEEecCCC
Confidence 45799999999654 444442 3689999999885 5777777654 999999998754
No 96
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=93.24 E-value=0.07 Score=44.42 Aligned_cols=59 Identities=10% Similarity=0.017 Sum_probs=41.6
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~hPnL 231 (232)
..+|++|+|+|.- .+||++- .+|.|.||++...+..+...+.. ...|.+++|+|....|
T Consensus 8 ~~~i~~~~~s~~~-~~l~~~~---------~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 67 (372)
T 1k8k_C 8 VEPISCHAWNKDR-TQIAICP---------NNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRI 67 (372)
T ss_dssp SSCCCEEEECTTS-SEEEEEC---------SSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEE
T ss_pred CCCeEEEEECCCC-CEEEEEe---------CCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEE
Confidence 4589999999864 4555541 25899999998741115556654 5699999999965443
No 97
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=93.22 E-value=0.15 Score=42.95 Aligned_cols=57 Identities=21% Similarity=0.271 Sum_probs=40.5
Q ss_pred CcceeEeecCCC-CCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCCC
Q psy17341 163 NRNVTYMDWSTQ-HPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKFF 228 (232)
Q Consensus 163 ~R~VT~IdWsP~-~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~h 228 (232)
...|++|+|+|. ...+||.+- .+|.|.||++...+..+.+.+.. ...|.+++|+|..
T Consensus 57 ~~~V~~v~~~~~~~~~~l~s~s---------~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~ 115 (316)
T 3bg1_A 57 EGPVWQVAWAHPMYGNILASCS---------YDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHD 115 (316)
T ss_dssp SSCEEEEEECCGGGSSCEEEEE---------TTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTT
T ss_pred CccEEEEEeCCCCCCCEEEEEE---------CCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCC
Confidence 358999999864 456666541 36899999998752234555554 4689999999974
No 98
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=93.22 E-value=0.15 Score=43.22 Aligned_cols=59 Identities=17% Similarity=0.110 Sum_probs=38.5
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCC--CCceEEeC-CCCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKT--TPEFEFFC-QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~--~PEyvf~~-~S~V~~v~FsP~hPnL 231 (232)
...|++|+|+|.- .+||.+- .+|.|.||++..... .+..++.. ...|.+++|+|....|
T Consensus 107 ~~~V~~v~~sp~g-~~las~s---------~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l 168 (330)
T 2hes_X 107 ENEVKGVAWSNDG-YYLATCS---------RDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALL 168 (330)
T ss_dssp --CEEEEEECTTS-CEEEEEE---------TTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEE
T ss_pred CCcEEEEEECCCC-CEEEEEe---------CCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEE
Confidence 3579999999964 3444431 368999999954311 23345554 4589999999975543
No 99
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=93.20 E-value=0.13 Score=43.45 Aligned_cols=57 Identities=19% Similarity=0.111 Sum_probs=40.5
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~hPnL 231 (232)
...|++++|+|.-.-|+.++ .+|.|.||++... .+...|.. ..+|++++|+|....|
T Consensus 65 ~~~v~~~~~s~dg~~l~s~s----------~D~~v~~wd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l 122 (319)
T 3frx_A 65 SHIVQDCTLTADGAYALSAS----------WDKTLRLWDVATG--ETYQRFVGHKSDVMSVDIDKKASMI 122 (319)
T ss_dssp SSCEEEEEECTTSSEEEEEE----------TTSEEEEEETTTT--EEEEEEECCSSCEEEEEECTTSCEE
T ss_pred cccEEEEEECCCCCEEEEEe----------CCCEEEEEECCCC--CeeEEEccCCCcEEEEEEcCCCCEE
Confidence 45899999998644333322 3699999999885 35455554 5689999999975543
No 100
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=93.13 E-value=0.14 Score=45.74 Aligned_cols=55 Identities=13% Similarity=0.155 Sum_probs=40.1
Q ss_pred cCCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCC--CCCCceEEeCC-CC-eEEEEecC
Q psy17341 161 SKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFK--KTTPEFEFFCQ-SP-VLSCCFAK 226 (232)
Q Consensus 161 SK~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~p--k~~PEyvf~~~-S~-V~~v~FsP 226 (232)
.....|++|+|||.-. ++|++. +|.|.||++... +..+...|... .. |+|++|+|
T Consensus 16 ~~~~~v~~~~~spdg~-~l~~~~----------~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp 74 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTN-AIAYPC----------GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSP 74 (615)
T ss_dssp CCTTCCCCCEEETTTT-EEEEEE----------TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECS
T ss_pred CccCceeEEEECCCCC-EEEEec----------CCeEEEEECCCCCCccccceEEecCCCceEEEEEECc
Confidence 4566899999999754 555543 368999999864 01466667654 46 99999999
No 101
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=93.06 E-value=0.15 Score=44.34 Aligned_cols=56 Identities=11% Similarity=0.046 Sum_probs=41.0
Q ss_pred cceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCC-CCeEEEEecCCCCcC
Q psy17341 164 RNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQ-SPVLSCCFAKFFFLY 231 (232)
Q Consensus 164 R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~-S~V~~v~FsP~hPnL 231 (232)
..|++|+|+|.-. +||++. .+|.|.||++... .+..++... ..|.+++|+|....|
T Consensus 124 ~~v~~v~~s~dg~-~l~s~~---------~d~~i~iwd~~~~--~~~~~~~~h~~~v~~~~~~p~~~~l 180 (393)
T 1erj_A 124 LYIRSVCFSPDGK-FLATGA---------EDRLIRIWDIENR--KIVMILQGHEQDIYSLDYFPSGDKL 180 (393)
T ss_dssp CBEEEEEECTTSS-EEEEEE---------TTSCEEEEETTTT--EEEEEECCCSSCEEEEEECTTSSEE
T ss_pred eeEEEEEECCCCC-EEEEEc---------CCCeEEEEECCCC--cEEEEEccCCCCEEEEEEcCCCCEE
Confidence 3599999999644 454432 3589999999874 466666654 589999999986554
No 102
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=92.89 E-value=0.17 Score=45.29 Aligned_cols=55 Identities=15% Similarity=0.056 Sum_probs=40.2
Q ss_pred cceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCCCCcC
Q psy17341 164 RNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 164 R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~hPnL 231 (232)
..|++|+|||.-. +||++. .+|.|.||++.. .+...+.. ...|.+++|+|....|
T Consensus 58 ~~V~~l~fspdg~-~las~~---------~d~~i~vWd~~~---~~~~~~~~~~~~v~~~~~s~d~~~l 113 (577)
T 2ymu_A 58 SSVWGVAFSPDGQ-TIASAS---------DDKTVKLWNRNG---QLLQTLTGHSSSVRGVAFSPDGQTI 113 (577)
T ss_dssp SCEEEEEECTTSS-EEEEEE---------TTSCEEEEETTS---CEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CCEEEEEECCCCC-EEEEEe---------CCCEEEEEECCC---CEEEEEECCCCCEEEEEECCCCCEE
Confidence 4799999999643 554432 258999999643 46677766 4589999999976554
No 103
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=92.87 E-value=0.15 Score=43.16 Aligned_cols=56 Identities=13% Similarity=0.024 Sum_probs=38.3
Q ss_pred cceeEeecCCCC-CCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEE--eCCCCeEEEEecCCCCc
Q psy17341 164 RNVTYMDWSTQH-PELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEF--FCQSPVLSCCFAKFFFL 230 (232)
Q Consensus 164 R~VT~IdWsP~~-~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf--~~~S~V~~v~FsP~hPn 230 (232)
..|++|+|+|.. ..+||++ + .+|.|.||++... .+..++ +....|+|++|+|....
T Consensus 126 ~~v~~~~~~~~~~~~~l~s~-s--------~dg~i~~wd~~~~--~~~~~~~~~~~~~i~~~~~~pdg~~ 184 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTEYFIWA-D--------NRGTIGFQSYEDD--SQYIVHSAKSDVEYSSGVLHKDSLL 184 (343)
T ss_dssp SCEEEEECCC---CCEEEEE-E--------TTCCEEEEESSSS--CEEEEECCCSSCCCCEEEECTTSCE
T ss_pred CCEEEEEcCCCCCCCEEEEE-e--------CCCcEEEEECCCC--cEEEEEecCCCCceEEEEECCCCCE
Confidence 479999999954 3444433 2 3689999999875 454444 33457999999997543
No 104
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=92.56 E-value=0.26 Score=47.45 Aligned_cols=57 Identities=23% Similarity=0.244 Sum_probs=42.1
Q ss_pred CCcceeEeecCCCC-CCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCC
Q psy17341 162 KNRNVTYMDWSTQH-PELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKF 227 (232)
Q Consensus 162 K~R~VT~IdWsP~~-~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~ 227 (232)
....|++|+|+|.. ..+++++- .+|.|.+|++......+...+.. ...|.++.|+|.
T Consensus 98 h~~~V~~v~~sp~~~~~~l~sgs---------~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~ 156 (753)
T 3jro_A 98 HSASVNSVQWAPHEYGPLLLVAS---------SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 156 (753)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEE---------TTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCC
T ss_pred CCCCeEEEEECCCCCCCEEEEEe---------CCCcEEEEEeecCCCcceeEeecCCCceEEEEecCc
Confidence 45689999999985 45666552 36899999998863344444444 579999999995
No 105
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=92.37 E-value=0.18 Score=47.39 Aligned_cols=57 Identities=19% Similarity=0.153 Sum_probs=41.2
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~hPnL 231 (232)
...|++|+|+|.-. +++++ + .+|.|.||++... .....|.. ...|+|++|+|....|
T Consensus 430 ~~~v~~v~~s~~g~-~l~sg-s--------~Dg~v~vwd~~~~--~~~~~~~~h~~~v~~~~~s~~~~~l 487 (694)
T 3dm0_A 430 SHFVEDVVLSSDGQ-FALSG-S--------WDGELRLWDLAAG--VSTRRFVGHTKDVLSVAFSLDNRQI 487 (694)
T ss_dssp SSCEEEEEECTTSS-EEEEE-E--------TTSEEEEEETTTT--EEEEEEECCSSCEEEEEECTTSSCE
T ss_pred CCcEEEEEECCCCC-EEEEE-e--------CCCcEEEEECCCC--cceeEEeCCCCCEEEEEEeCCCCEE
Confidence 35799999998643 44332 1 3699999999874 45556655 4589999999987654
No 106
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=91.28 E-value=0.29 Score=45.52 Aligned_cols=56 Identities=20% Similarity=0.250 Sum_probs=39.2
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC--CCCeEEEEecCCC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC--QSPVLSCCFAKFF 228 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~--~S~V~~v~FsP~h 228 (232)
...|++|+|||.-. +||.+ + .+|.|.||++..+...+..++.. ...|++++|+|..
T Consensus 536 ~~~V~~v~fspdg~-~lasg--s-------~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~ 593 (611)
T 1nr0_A 536 TAKVACVSWSPDNV-RLATG--S-------LDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNET 593 (611)
T ss_dssp SSCEEEEEECTTSS-EEEEE--E-------TTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETT
T ss_pred ccceeEEEECCCCC-EEEEE--E-------CCCcEEEEECCCcccccchhhccCcccCeeEEEEcCCC
Confidence 45799999999754 33332 1 36899999998862233245544 4799999999864
No 107
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=91.24 E-value=0.39 Score=40.56 Aligned_cols=58 Identities=10% Similarity=-0.145 Sum_probs=45.2
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hPnL 231 (232)
+..|++++|+|.-.-|++++. .+|.|.+|++... .....+.....|.+++|+|....|
T Consensus 31 ~~~~~~~~~s~dg~~l~~~~~---------~d~~i~v~d~~~~--~~~~~~~~~~~v~~~~~spdg~~l 88 (391)
T 1l0q_A 31 GSNPMGAVISPDGTKVYVANA---------HSNDVSIIDTATN--NVIATVPAGSSPQGVAVSPDGKQV 88 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEEG---------GGTEEEEEETTTT--EEEEEEECSSSEEEEEECTTSSEE
T ss_pred CCCcceEEECCCCCEEEEECC---------CCCeEEEEECCCC--eEEEEEECCCCccceEECCCCCEE
Confidence 346899999998776655542 2478999999874 567777778899999999987755
No 108
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=91.08 E-value=0.29 Score=45.49 Aligned_cols=59 Identities=15% Similarity=0.118 Sum_probs=42.3
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCC-CCeEEEEecCCCCcC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQ-SPVLSCCFAKFFFLY 231 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~-S~V~~v~FsP~hPnL 231 (232)
-...|++++|+|..+.+||.+- .+|.|.||+... ......|... ..|.|++|+|....|
T Consensus 146 h~~~v~~v~f~p~~~~~l~s~s---------~D~~v~lwd~~~--~~~~~~l~~H~~~V~~v~fspdg~~l 205 (611)
T 1nr0_A 146 QARAMNSVDFKPSRPFRIISGS---------DDNTVAIFEGPP--FKFKSTFGEHTKFVHSVRYNPDGSLF 205 (611)
T ss_dssp CSSCEEEEEECSSSSCEEEEEE---------TTSCEEEEETTT--BEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CCCCceEEEECCCCCeEEEEEe---------CCCeEEEEECCC--CeEeeeeccccCceEEEEECCCCCEE
Confidence 3458999999998776555431 368999999765 3455566654 489999999975443
No 109
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=90.94 E-value=0.54 Score=41.04 Aligned_cols=56 Identities=11% Similarity=0.044 Sum_probs=39.5
Q ss_pred eeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCCc
Q psy17341 166 VTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFFL 230 (232)
Q Consensus 166 VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hPn 230 (232)
+....|+|....+++++-+ .+|.|.||++... ...........+|.+++|||.-..
T Consensus 318 ~~~~~~~~~~~~~~~~sgs--------~Dg~V~lwd~~~~-~~~~~~~~~~~~V~svafspdG~~ 373 (393)
T 4gq1_A 318 LLGACPHPRYMDYFATAHS--------QHGLIQLINTYEK-DSNSIPIQLGMPIVDFCWHQDGSH 373 (393)
T ss_dssp SSCCEECSSCTTEEEEEET--------TTTEEEEEETTCT-TCCEEEEECSSCEEEEEECTTSSE
T ss_pred ceeEEEccCCCCEEEEEEC--------CCCEEEEEECCCC-cEEEEecCCCCcEEEEEEcCCCCE
Confidence 3455677777777777632 3699999999886 333444555679999999997543
No 110
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=90.82 E-value=0.36 Score=42.53 Aligned_cols=56 Identities=5% Similarity=-0.056 Sum_probs=38.6
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCC--CceEEe-CCCCeEEEEecCC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTT--PEFEFF-CQSPVLSCCFAKF 227 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~--PEyvf~-~~S~V~~v~FsP~ 227 (232)
-...|++|+|+|.-. +|+++- .+|.|.+|++...+.. +...+. -...|.|++|+|.
T Consensus 148 ~~~~v~~~~~sp~~~-~l~~~~---------~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~ 206 (450)
T 2vdu_B 148 FSKRPNAISIAEDDT-TVIIAD---------KFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKD 206 (450)
T ss_dssp CSSCEEEEEECTTSS-EEEEEE---------TTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEEC
T ss_pred CCCCceEEEEcCCCC-EEEEEe---------CCCcEEEEecCCcccccccceeeecccCceEEEEEcCC
Confidence 346899999999764 444441 2689999999875222 222333 3579999999997
No 111
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=90.74 E-value=0.2 Score=43.38 Aligned_cols=67 Identities=9% Similarity=0.027 Sum_probs=44.0
Q ss_pred CcceeEeecCC--CCCCeEEEEeccCCC----CCCCCCcEEEEEeCCCCCCCCceEEeC---CCCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWST--QHPELLLASYHRNKE----APNEPDGVCLIWNTKFKKTTPEFEFFC---QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP--~~~eL~aVSYgs~~~----~~~~~~GlVlvWslk~pk~~PEyvf~~---~S~V~~v~FsP~hPnL 231 (232)
...|..+.|+| ....+..+.|..... .....+|.|.+|++... .+...+.. ...|+|++|+|....|
T Consensus 154 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~--~~~~~~~~~~h~~~v~~~~~s~~~~~l 229 (437)
T 3gre_A 154 CECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTL--ERLQIIENSPRHGAVSSICIDEECCVL 229 (437)
T ss_dssp EEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTC--CEEEEEECCGGGCCEEEEEECTTSCEE
T ss_pred cceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC--eeeEEEccCCCCCceEEEEECCCCCEE
Confidence 34777788877 444444444332111 11124799999999884 67888876 4799999999985443
No 112
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=90.61 E-value=0.38 Score=47.93 Aligned_cols=56 Identities=7% Similarity=-0.009 Sum_probs=42.5
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hPnL 231 (232)
...|++|+|+| ..+||.+ + .+|.|.||++... .+-..+..+..|+|++|+|....|
T Consensus 58 ~~~V~~l~fsp--g~~L~S~-s--------~D~~v~lWd~~~~--~~~~~~~~~~~V~~v~~sp~g~~l 113 (902)
T 2oaj_A 58 RSAIKEMRFVK--GIYLVVI-N--------AKDTVYVLSLYSQ--KVLTTVFVPGKITSIDTDASLDWM 113 (902)
T ss_dssp CCCEEEEEEET--TTEEEEE-E--------TTCEEEEEETTTC--SEEEEEECSSCEEEEECCTTCSEE
T ss_pred CCCEEEEEEcC--CCEEEEE-E--------CcCeEEEEECCCC--cEEEEEcCCCCEEEEEECCCCCEE
Confidence 45899999999 3344443 2 3689999999875 466677777899999999986554
No 113
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=90.45 E-value=0.24 Score=47.70 Aligned_cols=56 Identities=21% Similarity=0.273 Sum_probs=40.5
Q ss_pred CcceeEeecCCCC-CCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEe-CCCCeEEEEecCC
Q psy17341 163 NRNVTYMDWSTQH-PELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFF-CQSPVLSCCFAKF 227 (232)
Q Consensus 163 ~R~VT~IdWsP~~-~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~-~~S~V~~v~FsP~ 227 (232)
...|++|+|+|.. ..+|+++. .+|.|.||++...+..+...+. ...+|.|++|+|.
T Consensus 53 ~~~V~~l~~s~~~~~~~l~s~s---------~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~ 110 (753)
T 3jro_A 53 EGPVWRVDWAHPKFGTILASCS---------YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPH 110 (753)
T ss_dssp SSCEEEEEECCTTSCSEEEEEE---------TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCG
T ss_pred cCceEEEEecCCCCCCEEEEEe---------CCCeEEEEECCCCcccccccccCCCCCeEEEEECCC
Confidence 4689999998864 56666553 2689999999875112444444 3569999999997
No 114
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=90.29 E-value=0.55 Score=39.67 Aligned_cols=59 Identities=10% Similarity=-0.086 Sum_probs=46.2
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCCcC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hPnL 231 (232)
.+..+++++|+|...-|++++. .+|.|.+|++... .+...+.....+.++.|+|....|
T Consensus 114 ~~~~~~~~~~s~dg~~l~~~~~---------~~~~v~~~d~~~~--~~~~~~~~~~~~~~~~~~~dg~~l 172 (391)
T 1l0q_A 114 TGKSPLGLALSPDGKKLYVTNN---------GDKTVSVINTVTK--AVINTVSVGRSPKGIAVTPDGTKV 172 (391)
T ss_dssp CSSSEEEEEECTTSSEEEEEET---------TTTEEEEEETTTT--EEEEEEECCSSEEEEEECTTSSEE
T ss_pred CCCCcceEEECCCCCEEEEEeC---------CCCEEEEEECCCC--cEEEEEecCCCcceEEECCCCCEE
Confidence 3457899999998766655542 3589999999874 577888888899999999987654
No 115
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=90.28 E-value=0.37 Score=47.95 Aligned_cols=60 Identities=22% Similarity=0.268 Sum_probs=43.3
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCCCCcC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~hPnL 231 (232)
....|++++|+|.....++++-+ .+|.|.+|++... .+...+.. ...|.+++|+|....|
T Consensus 698 ~~~~v~~~~~~~~~~~~~l~sg~--------~d~~v~vwd~~~~--~~~~~~~~h~~~v~~~~~sp~~~~l 758 (1249)
T 3sfz_A 698 HSEQVNCCHFTNKSNHLLLATGS--------NDFFLKLWDLNQK--ECRNTMFGHTNSVNHCRFSPDDELL 758 (1249)
T ss_dssp CSSCEEEEEECSSSSCCEEEEEE--------TTSCEEEEETTSS--SEEEEECCCSSCEEEEEECSSTTEE
T ss_pred CCCcEEEEEEecCCCceEEEEEe--------CCCeEEEEECCCc--chhheecCCCCCEEEEEEecCCCEE
Confidence 34579999999976555554433 3689999999885 45555554 4699999999976544
No 116
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=90.15 E-value=0.5 Score=41.15 Aligned_cols=53 Identities=15% Similarity=0.226 Sum_probs=40.4
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKF 227 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~ 227 (232)
-...|++|+|+|.. +++++. .+|.|.||++... .+...|.. .+.|.|++|+|.
T Consensus 161 h~~~V~~l~~~~~~--~l~s~s---------~dg~i~vwd~~~~--~~~~~~~~h~~~v~~l~~~~~ 214 (464)
T 3v7d_B 161 HDGGVWALKYAHGG--ILVSGS---------TDRTVRVWDIKKG--CCTHVFEGHNSTVRCLDIVEY 214 (464)
T ss_dssp CSSCEEEEEECSTT--EEEEEE---------TTSCEEEEETTTT--EEEEEECCCSSCEEEEEEEES
T ss_pred CCcCEEEEEEcCCC--EEEEEe---------CCCCEEEEECCCC--cEEEEECCCCCccEEEEEecC
Confidence 45689999999865 555442 3689999999875 46677764 579999999974
No 117
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=90.13 E-value=0.6 Score=40.03 Aligned_cols=65 Identities=9% Similarity=-0.124 Sum_probs=49.0
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hPnL 231 (232)
+..+++++|+|.-.-|++++++..... ..+|.|.+|++... .+...+.....+.+++|+|....|
T Consensus 253 ~~~~~~~~~~~~g~~l~~~~~~~~~~~--~~dg~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~g~~l 317 (433)
T 3bws_A 253 IGLPRGLLLSKDGKELYIAQFSASNQE--SGGGRLGIYSMDKE--KLIDTIGPPGNKRHIVSGNTENKI 317 (433)
T ss_dssp CSEEEEEEECTTSSEEEEEEEESCTTC--SCCEEEEEEETTTT--EEEEEEEEEECEEEEEECSSTTEE
T ss_pred CCCceEEEEcCCCCEEEEEECCCCccc--cCCCeEEEEECCCC--cEEeeccCCCCcceEEECCCCCEE
Confidence 456999999998887888887765422 35899999999874 355555556689999999987554
No 118
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=89.69 E-value=0.54 Score=46.76 Aligned_cols=57 Identities=12% Similarity=0.135 Sum_probs=42.1
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP~hPnL 231 (232)
...|++|+|||.-. ++|++ + .+|.|.||++... .+...+.. ...|+|++|+|....|
T Consensus 615 ~~~v~~~~~s~~~~-~l~s~-~--------~d~~i~vw~~~~~--~~~~~~~~h~~~v~~~~~s~~~~~l 672 (1249)
T 3sfz_A 615 TDAVYHACFSQDGQ-RIASC-G--------ADKTLQVFKAETG--EKLLDIKAHEDEVLCCAFSSDDSYI 672 (1249)
T ss_dssp SSCEEEEEECTTSS-EEEEE-E--------TTSCEEEEETTTC--CEEEEECCCSSCEEEEEECTTSSEE
T ss_pred cccEEEEEECCCCC-EEEEE-e--------CCCeEEEEECCCC--CEEEEeccCCCCEEEEEEecCCCEE
Confidence 45799999999644 44443 1 3689999999884 56666665 4599999999986544
No 119
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=88.71 E-value=1.3 Score=37.95 Aligned_cols=68 Identities=9% Similarity=-0.116 Sum_probs=48.5
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCC-----CCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCCcC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKE-----APNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~-----~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hPnL 231 (232)
....|.+|+|+|.-.-|++++.+.+.. .....+|.|.+|++... .+...+.....|.+++|+|....|
T Consensus 343 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~--~~~~~~~~~~~~~~~~~s~dg~~l 415 (433)
T 3bws_A 343 VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTD--TVKEFWEAGNQPTGLDVSPDNRYL 415 (433)
T ss_dssp CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTT--EEEEEEECSSSEEEEEECTTSCEE
T ss_pred CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCC--cEEEEecCCCCCceEEEcCCCCEE
Confidence 345689999999866566655543311 11234799999999874 577778888899999999976544
No 120
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=87.19 E-value=1.8 Score=42.41 Aligned_cols=56 Identities=14% Similarity=0.236 Sum_probs=38.7
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCC-CCc----eEEeCC-----CCeEEEEecCCC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKT-TPE----FEFFCQ-----SPVLSCCFAKFF 228 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~-~PE----yvf~~~-----S~V~~v~FsP~h 228 (232)
.+.|.+++|||.- .++|++ ..+|.|.||+++..+. .|+ ..+... +.|++++|+|..
T Consensus 129 ~~sv~svafSPDG-~~LAsg---------s~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg 194 (588)
T 2j04_A 129 SRTYHCFEWNPIE-SSIVVG---------NEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV 194 (588)
T ss_dssp TTCEEEEEECSSS-SCEEEE---------ETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE
T ss_pred cccEEEEEEcCCC-CEEEEE---------cCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc
Confidence 4579999999964 455444 1379999999988521 254 333322 489999999964
No 121
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=86.13 E-value=0.54 Score=36.98 Aligned_cols=57 Identities=16% Similarity=0.022 Sum_probs=40.7
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCC--CCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQ--SPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~--S~V~~v~FsP~hPnL 231 (232)
...|++++|+|.-. ++|++ .+|.|.+|++..+ ..+..++... ..|.+++|+|....|
T Consensus 41 ~~~v~~~~~spdg~-~l~~~----------~~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~spdg~~l 99 (297)
T 2ojh_A 41 PELFEAPNWSPDGK-YLLLN----------SEGLLYRLSLAGD-PSPEKVDTGFATICNNDHGISPDGALY 99 (297)
T ss_dssp SSCCEEEEECTTSS-EEEEE----------ETTEEEEEESSSC-CSCEECCCTTCCCBCSCCEECTTSSEE
T ss_pred CcceEeeEECCCCC-EEEEE----------cCCeEEEEeCCCC-CCceEeccccccccccceEECCCCCEE
Confidence 45799999999755 44443 1368999999883 4566666554 578999999976543
No 122
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=85.78 E-value=1.8 Score=38.30 Aligned_cols=59 Identities=8% Similarity=-0.046 Sum_probs=43.5
Q ss_pred cceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCCcC
Q psy17341 164 RNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 164 R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hPnL 231 (232)
..|++++|||.-.-|+.+++.. ..+.|.+|++... .+..+......|.+++|+|.-..|
T Consensus 179 ~~v~~~~~Spdg~~la~~s~~~-------~~~~i~~~d~~tg--~~~~l~~~~~~~~~~~~spdg~~l 237 (415)
T 2hqs_A 179 QPLMSPAWSPDGSKLAYVTFES-------GRSALVIQTLANG--AVRQVASFPRHNGAPAFSPDGSKL 237 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTT-------SSCEEEEEETTTC--CEEEEECCSSCEEEEEECTTSSEE
T ss_pred CcceeeEEcCCCCEEEEEEecC-------CCcEEEEEECCCC--cEEEeecCCCcccCEEEcCCCCEE
Confidence 4799999999876566555432 2468999999874 455565566789999999976543
No 123
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=84.68 E-value=1.5 Score=38.03 Aligned_cols=52 Identities=12% Similarity=0.087 Sum_probs=34.8
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAK 226 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP 226 (232)
...|++++|+|...-|++++ .+|.|.||++... .+...+.. ...|.++.|++
T Consensus 310 ~~~v~~~~~~~~~~~l~sg~----------~dg~i~vwd~~~~--~~~~~~~~h~~~v~~~~~~~ 362 (464)
T 3v7d_B 310 TDRIYSTIYDHERKRCISAS----------MDTTIRIWDLENG--ELMYTLQGHTALVGLLRLSD 362 (464)
T ss_dssp SSCEEEEEEETTTTEEEEEE----------TTSCEEEEETTTT--EEEEEECCCSSCEEEEEECS
T ss_pred CCCEEEEEEcCCCCEEEEEe----------CCCcEEEEECCCC--cEEEEEeCCCCcEEEEEEcC
Confidence 45799999999655444332 2577888888764 46666654 34788888774
No 124
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=84.42 E-value=2.3 Score=36.98 Aligned_cols=54 Identities=15% Similarity=0.188 Sum_probs=38.6
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEE------eCCCCeEEEEecCCCC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEF------FCQSPVLSCCFAKFFF 229 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf------~~~S~V~~v~FsP~hP 229 (232)
....|++++|++ .+++++- .+|.|.||++... .+...+ .....|.+++|+|...
T Consensus 361 ~~~~v~~~~~~~---~~l~s~~---------~dg~v~iwd~~~~--~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 420 (445)
T 2ovr_B 361 HQSAVTCLQFNK---NFVITSS---------DDGTVKLWDLKTG--EFIRNLVTLESGGSGGVVWRIRASNTKL 420 (445)
T ss_dssp CSSCEEEEEECS---SEEEEEE---------TTSEEEEEETTTC--CEEEEEEECTTGGGTCEEEEEEECSSEE
T ss_pred CCCCEEEEEECC---CEEEEEe---------CCCeEEEEECCCC--ceeeeeeccccCCCCceEEEEEecCCEE
Confidence 345799999974 5666553 3699999999985 344444 3456899999998643
No 125
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=84.08 E-value=1.4 Score=37.70 Aligned_cols=33 Identities=21% Similarity=0.281 Sum_probs=23.8
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFK 205 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~p 205 (232)
...|++|+|+|.-.=|++++ .+|.|.||++..+
T Consensus 240 ~~~v~~~~~s~~~~~l~s~s----------~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 240 RADVVDMKWSTDGSKLAVVS----------DKWTLHVFEIFND 272 (355)
T ss_dssp CSCEEEEEECTTSCEEEEEE----------TTCEEEEEESSCC
T ss_pred CCcEEEEEECCCCCEEEEEE----------CCCEEEEEEccCC
Confidence 45899999999654333322 2589999999875
No 126
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=80.63 E-value=3 Score=32.61 Aligned_cols=61 Identities=11% Similarity=0.014 Sum_probs=39.5
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCCcC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hPnL 231 (232)
....+.+++|+|.-.-|+.++.. +|.+.||.+......+..+......|.++.|+|....|
T Consensus 127 ~~~~~~~~~~spdg~~l~~~~~~---------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 187 (297)
T 2ojh_A 127 KNLPSYWHGWSPDGKSFTYCGIR---------DQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWI 187 (297)
T ss_dssp SSSSEEEEEECTTSSEEEEEEEE---------TTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEE
T ss_pred cCCCccceEECCCCCEEEEEECC---------CCceEEEEEECCCCcceEcccCCCccccceECCCCCEE
Confidence 33458999999987655544432 36688888654312334444445789999999976544
No 127
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=80.50 E-value=1.3 Score=41.18 Aligned_cols=53 Identities=9% Similarity=-0.109 Sum_probs=40.9
Q ss_pred cceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCCc
Q psy17341 164 RNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFFL 230 (232)
Q Consensus 164 R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hPn 230 (232)
..|++++|||. ..++++.. |.|.+|++... .+..+......|.+++|||.--.
T Consensus 82 ~~v~~~~~spd--~~~~~~~~----------~~i~~~d~~~~--~~~~l~~~~~~~~~~~~SpdG~~ 134 (706)
T 2z3z_A 82 FPSFRTLDAGR--GLVVLFTQ----------GGLVGFDMLAR--KVTYLFDTNEETASLDFSPVGDR 134 (706)
T ss_dssp CCCEEEEETTT--TEEEEEET----------TEEEEEETTTT--EEEEEECCTTCCTTCEECTTSSE
T ss_pred cCceeEEECCC--CeEEEEEC----------CEEEEEECCCC--ceEEccCCcccccCCcCCCCCCE
Confidence 67999999998 56666543 78999999774 46666666778999999997543
No 128
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=79.33 E-value=1.8 Score=35.22 Aligned_cols=61 Identities=10% Similarity=-0.123 Sum_probs=40.9
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCC--CceEEeCCCCeEEEEecCCCCcC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTT--PEFEFFCQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~--PEyvf~~~S~V~~v~FsP~hPnL 231 (232)
....+++|+|+|.-.-|++++.+ +|.|.+|++...... +-..+.....+.+++|+|....|
T Consensus 36 ~~~~~~~~~~spdg~~l~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 98 (343)
T 1ri6_A 36 VPGQVQPMVVSPDKRYLYVGVRP---------EFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFV 98 (343)
T ss_dssp CSSCCCCEEECTTSSEEEEEETT---------TTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEE
T ss_pred cCCCCceEEECCCCCEEEEeecC---------CCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEE
Confidence 34578999999976656655543 378999999732122 23345555688999999876543
No 129
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=78.64 E-value=3.7 Score=35.72 Aligned_cols=50 Identities=12% Similarity=0.263 Sum_probs=36.4
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEecC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFAK 226 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~FsP 226 (232)
...|++|+| ...+++++. .+|.|.||++... .+...+.. ...|++++|++
T Consensus 173 ~~~v~~l~~---~~~~l~sg~---------~dg~i~vwd~~~~--~~~~~~~~h~~~v~~l~~~~ 223 (435)
T 1p22_A 173 TGSVLCLQY---DERVIITGS---------SDSTVRVWDVNTG--EMLNTLIHHCEAVLHLRFNN 223 (435)
T ss_dssp SSCEEEEEC---CSSEEEEEE---------TTSCEEEEESSSC--CEEEEECCCCSCEEEEECCT
T ss_pred CCcEEEEEE---CCCEEEEEc---------CCCeEEEEECCCC--cEEEEEcCCCCcEEEEEEcC
Confidence 457899998 355666653 3689999999885 45556654 45899999975
No 130
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=77.86 E-value=2.7 Score=34.07 Aligned_cols=60 Identities=5% Similarity=-0.117 Sum_probs=39.4
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCC--CCCCceEEeCCCCeEEEEecCCCCcC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFK--KTTPEFEFFCQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~p--k~~PEyvf~~~S~V~~v~FsP~hPnL 231 (232)
...+++|+|+|.-.-|++++. .+|.|.+|++... +..+...+.....+.+++|+|....|
T Consensus 230 ~~~~~~i~~s~dg~~l~v~~~---------~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 291 (343)
T 1ri6_A 230 TRWAADIHITPDGRHLYACDR---------TASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYL 291 (343)
T ss_dssp CCCEEEEEECTTSSEEEEEET---------TTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEE
T ss_pred cCCccceEECCCCCEEEEEec---------CCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEE
Confidence 346778999987665544331 2589999999842 12334445555668999999875443
No 131
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=72.02 E-value=5.3 Score=34.62 Aligned_cols=49 Identities=12% Similarity=0.175 Sum_probs=26.8
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEec
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFA 225 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~Fs 225 (232)
...|++++|+ +++++++.. +|.|.+|++... .+...+.. ...|.|+.|+
T Consensus 159 ~~~v~~~~~~---~~~l~s~~~---------dg~i~vwd~~~~--~~~~~~~~h~~~v~~~~~~ 208 (445)
T 2ovr_B 159 TGGVWSSQMR---DNIIISGST---------DRTLKVWNAETG--ECIHTLYGHTSTVRCMHLH 208 (445)
T ss_dssp SSCEEEEEEE---TTEEEEEET---------TSCEEEEETTTT--EEEEEECCCSSCEEEEEEE
T ss_pred CCCEEEEEec---CCEEEEEeC---------CCeEEEEECCcC--cEEEEECCCCCcEEEEEec
Confidence 4578899987 445655432 355666665543 23333332 2356666554
No 132
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=71.42 E-value=7.8 Score=31.48 Aligned_cols=54 Identities=9% Similarity=-0.155 Sum_probs=39.3
Q ss_pred cceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCCc
Q psy17341 164 RNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFFL 230 (232)
Q Consensus 164 R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hPn 230 (232)
..+.+++|+|....+++++ .|.|.+|+++.. .....+.....+.+++|+|..-.
T Consensus 255 ~~~~~~~~sp~dg~~l~~~-----------~~~v~~~d~~~~--~~~~~~~~~~~~~~~~~s~dg~~ 308 (349)
T 1jmx_B 255 ELYFTGLRSPKDPNQIYGV-----------LNRLAKYDLKQR--KLIKAANLDHTYYCVAFDKKGDK 308 (349)
T ss_dssp SCEEEEEECSSCTTEEEEE-----------ESEEEEEETTTT--EEEEEEECSSCCCEEEECSSSSC
T ss_pred CcceeeEecCCCCCEEEEE-----------cCeEEEEECccC--eEEEEEcCCCCccceEECCCCCE
Confidence 4678899999444555555 368999999874 45566667778889999987543
No 133
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=69.74 E-value=7.4 Score=33.77 Aligned_cols=49 Identities=12% Similarity=0.243 Sum_probs=34.8
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC-CCCeEEEEec
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC-QSPVLSCCFA 225 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~-~S~V~~v~Fs 225 (232)
...|+|++|. ..++|++. .+|.|.||++... .+...+.. ...|+|++|+
T Consensus 133 ~~~v~~~~~d---~~~l~~g~---------~dg~i~iwd~~~~--~~~~~~~~h~~~v~~l~~~ 182 (435)
T 1p22_A 133 SKGVYCLQYD---DQKIVSGL---------RDNTIKIWDKNTL--ECKRILTGHTGSVLCLQYD 182 (435)
T ss_dssp CCCEEEEECC---SSEEEEEE---------SSSCEEEEESSSC--CEEEEECCCSSCEEEEECC
T ss_pred CCcEEEEEEC---CCEEEEEe---------CCCeEEEEeCCCC--eEEEEEcCCCCcEEEEEEC
Confidence 3568888883 45565552 3689999999874 56666665 4589999993
No 134
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=66.07 E-value=5.9 Score=38.77 Aligned_cols=49 Identities=10% Similarity=0.039 Sum_probs=34.7
Q ss_pred cceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCC--CceEEe--CCCCeEEEEec
Q psy17341 164 RNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTT--PEFEFF--CQSPVLSCCFA 225 (232)
Q Consensus 164 R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~--PEyvf~--~~S~V~~v~Fs 225 (232)
..|.+|+|||.- |++++. ++.|.+|++... .. +...+. ....|.+++|+
T Consensus 183 ~~V~sVawSPdg--Laass~----------D~tVrlWd~~~~-~~~~~~~tL~~~h~~~V~svaFs 235 (588)
T 2j04_A 183 DWVTHIVWYEDV--LVAALS----------NNSVFSMTVSAS-SHQPVSRMIQNASRRKITDLKIV 235 (588)
T ss_dssp CCEEEEEEETTE--EEEEET----------TCCEEEECCCSS-SSCCCEEEEECCCSSCCCCEEEE
T ss_pred ccEEEEEEcCCc--EEEEeC----------CCeEEEEECCCC-ccccceeeecccccCcEEEEEEE
Confidence 379999999975 443332 579999999886 32 223452 34789999998
No 135
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=65.72 E-value=10 Score=33.30 Aligned_cols=59 Identities=8% Similarity=-0.188 Sum_probs=39.4
Q ss_pred cceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCCcC
Q psy17341 164 RNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFFLY 231 (232)
Q Consensus 164 R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hPnL 231 (232)
..|.+++|||.-.-|+.++.. +...-|.+|++... .+..+......|.++.|+|....|
T Consensus 223 ~~~~~~~~spdg~~la~~~~~-------~g~~~i~~~d~~~~--~~~~l~~~~~~~~~~~~spdg~~l 281 (415)
T 2hqs_A 223 RHNGAPAFSPDGSKLAFALSK-------TGSLNLYVMDLASG--QIRQVTDGRSNNTEPTWFPDSQNL 281 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECT-------TSSCEEEEEETTTC--CEEECCCCSSCEEEEEECTTSSEE
T ss_pred CcccCEEEcCCCCEEEEEEec-------CCCceEEEEECCCC--CEEeCcCCCCcccceEECCCCCEE
Confidence 368999999975544433321 12457999999874 344444456789999999975443
No 136
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=60.47 E-value=17 Score=29.52 Aligned_cols=57 Identities=5% Similarity=-0.166 Sum_probs=41.7
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCC---ceEEeCCCCeEEEEecCCCC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTP---EFEFFCQSPVLSCCFAKFFF 229 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~P---Eyvf~~~S~V~~v~FsP~hP 229 (232)
.+..+.++.|+|.-.-|++++.+ +|.|.+|++... .. ...+.....+.++.|+|.--
T Consensus 174 ~~~~~~~~~~spdg~~l~v~~~~---------~~~v~v~d~~~~--~~~~~~~~~~~~~~~~~~~~spdg~ 233 (331)
T 3u4y_A 174 GGTRPFNITFTPDGNFAFVANLI---------GNSIGILETQNP--ENITLLNAVGTNNLPGTIVVSRDGS 233 (331)
T ss_dssp SSSSEEEEEECTTSSEEEEEETT---------TTEEEEEECSST--TSCEEEEEEECSSCCCCEEECTTSS
T ss_pred CCCCccceEECCCCCEEEEEeCC---------CCeEEEEECCCC--cccceeeeccCCCCCceEEECCCCC
Confidence 34567899999976656655432 478999999864 33 66677778889999998754
No 137
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=57.99 E-value=13 Score=29.85 Aligned_cols=51 Identities=4% Similarity=-0.200 Sum_probs=36.6
Q ss_pred ceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCC
Q psy17341 165 NVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFF 229 (232)
Q Consensus 165 ~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hP 229 (232)
.+.+|+|+|.-.-| +++ +|.|.+|+++.. .+...+.....+.++.|+|..-
T Consensus 242 ~~~~~~~s~dg~~l-~~~-----------~~~v~~~d~~~~--~~~~~~~~~~~~~~~~~s~dg~ 292 (337)
T 1pby_B 242 FYFSTAVNPAKTRA-FGA-----------YNVLESFDLEKN--ASIKRVPLPHSYYSVNVSTDGS 292 (337)
T ss_dssp CEEEEEECTTSSEE-EEE-----------ESEEEEEETTTT--EEEEEEECSSCCCEEEECTTSC
T ss_pred ceeeEEECCCCCEE-EEe-----------CCeEEEEECCCC--cCcceecCCCceeeEEECCCCC
Confidence 56678999865444 444 278999999874 4556666777889999998643
No 138
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=57.41 E-value=9.5 Score=30.95 Aligned_cols=66 Identities=12% Similarity=-0.055 Sum_probs=41.5
Q ss_pred CcceeEeecCCCCCCeEEEEeccC--CCCCCCCCcEEEEEeCCCCC-CCCceEEeCCCCeEEEEecCCC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRN--KEAPNEPDGVCLIWNTKFKK-TTPEFEFFCQSPVLSCCFAKFF 228 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~--~~~~~~~~GlVlvWslk~pk-~~PEyvf~~~S~V~~v~FsP~h 228 (232)
+..+.++.|+|.-.-|++++.... ........|.|.+|++...+ ......+..+..|.+++|+|..
T Consensus 91 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg 159 (349)
T 1jmx_B 91 GRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG 159 (349)
T ss_dssp EECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTS
T ss_pred cccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCC
Confidence 345889999998766666553210 00000124799999987621 1344566777789999999864
No 139
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=57.37 E-value=14 Score=33.81 Aligned_cols=46 Identities=11% Similarity=-0.042 Sum_probs=31.7
Q ss_pred ceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCC
Q psy17341 165 NVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKF 227 (232)
Q Consensus 165 ~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~ 227 (232)
.|.+|.|.+. . +|+. . .+|.|.+|+++.. .-+. ....|+|++|||.
T Consensus 128 ~v~~i~~~~p--~-~av~-~--------~dG~L~v~dl~~~--~~~~---~~~~Vs~v~WSpk 173 (388)
T 1xip_A 128 PVFQLKNVNN--T-LVIL-N--------SVNDLSALDLRTK--STKQ---LAQNVTSFDVTNS 173 (388)
T ss_dssp CEEEEEECSS--E-EEEE-E--------TTSEEEEEETTTC--CEEE---EEESEEEEEECSS
T ss_pred ceeeEEecCC--C-EEEE-E--------CCCCEEEEEccCC--cccc---ccCCceEEEEcCC
Confidence 4777777654 3 3332 1 4699999999975 2343 2369999999996
No 140
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=56.28 E-value=11 Score=30.34 Aligned_cols=64 Identities=8% Similarity=-0.059 Sum_probs=42.1
Q ss_pred ceeEeecCCCCCCeEEEEeccCCCCCCC--CCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCCc
Q psy17341 165 NVTYMDWSTQHPELLLASYHRNKEAPNE--PDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFFL 230 (232)
Q Consensus 165 ~VT~IdWsP~~~eL~aVSYgs~~~~~~~--~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hPn 230 (232)
.+.++.|+|.-.-|++++.+........ .+|.|.+|++... .+...+.....+.++.|+|..-.
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~--~~~~~~~~~~~~~~~~~s~dg~~ 148 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETL--SRRKAFEAPRQITMLAWARDGSK 148 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTT--EEEEEEECCSSCCCEEECTTSSC
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCC--cEEEEEeCCCCcceeEECCCCCE
Confidence 5778999987665665554321110001 3589999999764 45666777778888999987543
No 141
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=55.30 E-value=6 Score=36.20 Aligned_cols=54 Identities=20% Similarity=0.126 Sum_probs=33.0
Q ss_pred cceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEE------e----CCCCeEEEEecCCCC
Q psy17341 164 RNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEF------F----CQSPVLSCCFAKFFF 229 (232)
Q Consensus 164 R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf------~----~~S~V~~v~FsP~hP 229 (232)
-.|+||+|||+= ++++++ +|.|.+|+......++-..+ + -+..|+++.|.+.+-
T Consensus 163 ~~Vs~v~WSpkG---~~vg~~---------dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~ 226 (388)
T 1xip_A 163 QNVTSFDVTNSQ---LAVLLK---------DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQD 226 (388)
T ss_dssp ESEEEEEECSSE---EEEEET---------TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSE
T ss_pred CCceEEEEcCCc---eEEEEc---------CCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCe
Confidence 479999999987 455443 46677775544311112334 2 245699999887653
No 142
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=54.63 E-value=13 Score=30.19 Aligned_cols=62 Identities=15% Similarity=0.086 Sum_probs=45.4
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFF 229 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hP 229 (232)
+..+.++.|+|.-.-|++++++... ...+|.|.+|+.... .....+.....+.++.|+|..-
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~---~~~~~~v~~~d~~~~--~~~~~~~~~~~~~~~~~s~dg~ 101 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRK---LDKGGVVYRLDPVTL--EVTQAIHNDLKPFGATINNTTQ 101 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTT---TEESEEEEEECTTTC--CEEEEEEESSCCCSEEEETTTT
T ss_pred ccCccceEECCCCCEEEEEcCCCcC---CCCCccEEEEcCCCC--eEEEEEecCCCcceEEECCCCC
Confidence 3468899999987778777766542 123689999999874 4666666667788888888654
No 143
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=54.52 E-value=22 Score=29.65 Aligned_cols=56 Identities=11% Similarity=-0.025 Sum_probs=39.0
Q ss_pred ceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCC-------------CceEEeCCCCeEEEEecCCCCc
Q psy17341 165 NVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTT-------------PEFEFFCQSPVLSCCFAKFFFL 230 (232)
Q Consensus 165 ~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~-------------PEyvf~~~S~V~~v~FsP~hPn 230 (232)
.+.+|+|+|.-.-|++++++ ++.|.+|++... .. +...+.....+.++.|+|.-..
T Consensus 156 ~~~~~~~spdg~~l~~~~~~---------~~~v~v~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~ 224 (361)
T 3scy_A 156 HLHCVRITPDGKYLLADDLG---------TDQIHKFNINPN-ANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKF 224 (361)
T ss_dssp CEEEEEECTTSSEEEEEETT---------TTEEEEEEECTT-CCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSE
T ss_pred cceEEEECCCCCEEEEEeCC---------CCEEEEEEEcCC-CCcccccceeecccccceecCCCCCCeEEEEcCCCCE
Confidence 46889999977667766543 467899988765 32 3344555668889999987543
No 144
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=54.47 E-value=12 Score=34.84 Aligned_cols=54 Identities=11% Similarity=0.062 Sum_probs=38.4
Q ss_pred ceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCC--CCceEEeCCCCeEEEEecCCCCc
Q psy17341 165 NVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKT--TPEFEFFCQSPVLSCCFAKFFFL 230 (232)
Q Consensus 165 ~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~--~PEyvf~~~S~V~~v~FsP~hPn 230 (232)
.|++++|||.-.-|+.++. |.|.+|++... . .+..+......|.++.|||.--.
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-----------~~i~~~d~~~~-~~~~~~~l~~~~~~~~~~~~SPDG~~ 165 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-----------GELYLYDLKQE-GKAAVRQLTHGEGFATDAKLSPKGGF 165 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-----------TEEEEEESSSC-STTSCCBCCCSSSCEEEEEECTTSSE
T ss_pred CcceeEECCCCCEEEEEeC-----------CcEEEEECCCC-CcceEEEcccCCcccccccCCCCCCE
Confidence 4899999997654544442 78999999874 2 34444445578999999997543
No 145
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=47.37 E-value=31 Score=28.41 Aligned_cols=56 Identities=11% Similarity=0.033 Sum_probs=35.7
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEe--C----------CCCeEEEEecCCC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFF--C----------QSPVLSCCFAKFF 228 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~--~----------~S~V~~v~FsP~h 228 (232)
...+++|+|+|.-.-|++++|+ +|.|.+|++... .....+.. . ...+.++.|+|.-
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~---------~~~v~v~~~~~~-g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg 152 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYH---------KGTAEVMKIAAD-GALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDN 152 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETT---------TTEEEEEEECTT-SCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTS
T ss_pred CCCCEEEEECCCCCEEEEEeCC---------CCEEEEEEeCCC-CCeeecceeecCCCCCCccccCCCceEEEECCCC
Confidence 4567889999876656666542 478999998642 23332222 1 1248889998864
No 146
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=44.95 E-value=36 Score=27.55 Aligned_cols=57 Identities=5% Similarity=-0.075 Sum_probs=38.8
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEE-EEecCCCCc
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLS-CCFAKFFFL 230 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~-v~FsP~hPn 230 (232)
...+ +++|+|.-.-|++++.+ +|.|.+|++... ..+...+........ +.|+|....
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~---------~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~s~dg~~ 97 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDF---------CQTLVQIETQLE-PPKVVAIQEGQSSMADVDITPDDQF 97 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEEST---------TCEEEEEECSSS-SCEEEEEEECSSCCCCEEECTTSSE
T ss_pred CCcc-eEEEcCCCCEEEEEeCC---------CCeEEEEECCCC-ceeEEecccCCCCccceEECCCCCE
Confidence 4556 99999987766666653 358999999875 332555555555555 899987543
No 147
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=43.93 E-value=58 Score=30.07 Aligned_cols=58 Identities=9% Similarity=-0.002 Sum_probs=38.7
Q ss_pred CcceeEeecCC----CCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeC------------CCCeEEEEecC
Q psy17341 163 NRNVTYMDWST----QHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC------------QSPVLSCCFAK 226 (232)
Q Consensus 163 ~R~VT~IdWsP----~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~------------~S~V~~v~FsP 226 (232)
+..+..|+||| .-.=|++++|. +|.|.||+.... .|..++.. ...|.++.|+|
T Consensus 221 g~~p~~va~sp~~~~dg~~l~v~~~~---------~~~v~v~D~~t~--~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~ 289 (543)
T 1nir_A 221 GIEARSVESSKFKGYEDRYTIAGAYW---------PPQFAIMDGETL--EPKQIVSTRGMTVDTQTYHPEPRVAAIIASH 289 (543)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEE---------SSEEEEEETTTC--CEEEEEECCEECSSSCCEESCCCEEEEEECS
T ss_pred CCCcceEEeCCCcCCCCCEEEEEEcc---------CCeEEEEecccc--ccceeecccCcccCccccccCCceEEEEECC
Confidence 44567888888 44445555554 367889987653 45444443 34789999999
Q ss_pred CCCcC
Q psy17341 227 FFFLY 231 (232)
Q Consensus 227 ~hPnL 231 (232)
.++.+
T Consensus 290 ~~~~~ 294 (543)
T 1nir_A 290 EHPEF 294 (543)
T ss_dssp SSSEE
T ss_pred CCCEE
Confidence 87754
No 148
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=43.84 E-value=31 Score=31.72 Aligned_cols=61 Identities=10% Similarity=-0.008 Sum_probs=37.4
Q ss_pred ceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCC----CeEEEEecCCCC
Q psy17341 165 NVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQS----PVLSCCFAKFFF 229 (232)
Q Consensus 165 ~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S----~V~~v~FsP~hP 229 (232)
.|++++|||.-. .+|.+............|-|.+|++... .+ ..+.... .|.++.|||.--
T Consensus 62 ~v~~~~~SpDg~-~l~~~~~~~~~~~~~~~~~i~~~d~~~~--~~-~~l~~~~~~~~~~~~~~~SPdG~ 126 (723)
T 1xfd_A 62 RAIRYEISPDRE-YALFSYNVEPIYQHSYTGYYVLSKIPHG--DP-QSLDPPEVSNAKLQYAGWGPKGQ 126 (723)
T ss_dssp TCSEEEECTTSS-EEEEEESCCCCSSSCCCSEEEEEESSSC--CC-EECCCTTCCSCCCSBCCBCSSTT
T ss_pred ccceEEECCCCC-EEEEEecCccceeecceeeEEEEECCCC--ce-EeccCCccccccccccEECCCCC
Confidence 499999999744 4444433222112234689999999875 23 2333222 388999999743
No 149
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=43.11 E-value=25 Score=28.51 Aligned_cols=55 Identities=2% Similarity=-0.143 Sum_probs=37.7
Q ss_pred ceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEe-CCCCeEEEEecCCCC
Q psy17341 165 NVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFF-CQSPVLSCCFAKFFF 229 (232)
Q Consensus 165 ~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~-~~S~V~~v~FsP~hP 229 (232)
.+.+|.|+|.-.-|++++++. +|.|.+|++... .....+. ....+.++.|+|..-
T Consensus 142 ~~~~~~~s~dg~~l~~~~~~~--------~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~s~dg~ 197 (353)
T 3vgz_A 142 QPRELVADDATNTVYISGIGK--------ESVIWVVDGGNI--KLKTAIQNTGKMSTGLALDSEGK 197 (353)
T ss_dssp EEEEEEEETTTTEEEEEEESS--------SCEEEEEETTTT--EEEEEECCCCTTCCCCEEETTTT
T ss_pred CCceEEECCCCCEEEEEecCC--------CceEEEEcCCCC--ceEEEecCCCCccceEEECCCCC
Confidence 378899999877677666543 478899998764 3445555 344577888887643
No 150
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=41.96 E-value=18 Score=33.51 Aligned_cols=63 Identities=0% Similarity=-0.112 Sum_probs=41.3
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCC-------------------------
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQ------------------------- 216 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~------------------------- 216 (232)
..+.|++++|||.-.-|+.+++... ....+.|.+|++... .+..++...
T Consensus 35 ~~~~~~~~~~SpdG~~la~~~~~d~----~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (741)
T 2ecf_A 35 SGPTLMKPKVAPDGSRVTFLRGKDS----DRNQLDLWSYDIGSG--QTRLLVDSKVVLPGTETLSDEEKARRERQRIAAM 108 (741)
T ss_dssp TCCCCEEEEECTTSSEEEEEECCSS----CTTEEEEEEEETTTC--CEEEEECGGGTC--------------------CC
T ss_pred CCCCCCCceEecCCCEEEEEeccCC----CCcccEEEEEECCCC--ceeEccchhhcccccccccchhhhhhhhhhhccc
Confidence 3678999999997665555554211 112348999999874 455555432
Q ss_pred CCeEEEEecCCCCc
Q psy17341 217 SPVLSCCFAKFFFL 230 (232)
Q Consensus 217 S~V~~v~FsP~hPn 230 (232)
..|.++.|||.--.
T Consensus 109 ~~v~~~~~SpDg~~ 122 (741)
T 2ecf_A 109 TGIVDYQWSPDAQR 122 (741)
T ss_dssp EESCCCEECTTSSE
T ss_pred cCcceeEECCCCCE
Confidence 23889999997543
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=41.00 E-value=34 Score=28.17 Aligned_cols=56 Identities=4% Similarity=-0.143 Sum_probs=35.7
Q ss_pred cceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceE--EeC-CCCeEEEEecCCCC
Q psy17341 164 RNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFE--FFC-QSPVLSCCFAKFFF 229 (232)
Q Consensus 164 R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyv--f~~-~S~V~~v~FsP~hP 229 (232)
..+.+|+|+|.-.-|++++.+ +|.|.+|++... ...+.+ +.. ...+.+++|+|.--
T Consensus 240 ~~~~~i~~spdG~~l~v~~~~---------~~~v~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~spdg~ 298 (347)
T 3hfq_A 240 NGAAAIRLSHDGHFLYVSNRG---------YNTLAVFAVTAD-GHLTLIQQISTEGDFPRDFDLDPTEA 298 (347)
T ss_dssp CEEEEEEECTTSCEEEEEEET---------TTEEEEEEECGG-GCEEEEEEEECSSSCCCEEEECTTSS
T ss_pred CcceeEEECCCCCEEEEEeCC---------CCEEEEEEECCC-CcEEEeEEEecCCCCcCeEEECCCCC
Confidence 457889999876555555432 478999998743 233333 333 33578899988654
No 152
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=39.86 E-value=45 Score=30.48 Aligned_cols=33 Identities=18% Similarity=0.201 Sum_probs=24.7
Q ss_pred CCcEEEEEeCCCCCCCCceEEeC----CCCeEEEEecCC
Q psy17341 193 PDGVCLIWNTKFKKTTPEFEFFC----QSPVLSCCFAKF 227 (232)
Q Consensus 193 ~~GlVlvWslk~pk~~PEyvf~~----~S~V~~v~FsP~ 227 (232)
.||.|.||+++.. .....|+. ...|.+++|||.
T Consensus 201 ~D~TIkIWDl~TG--k~l~tL~g~~~~v~~v~~vafSpd 237 (356)
T 2w18_A 201 IMNNIVIWNLKTG--QLLKKMHIDDSYQASVCHKAYSEM 237 (356)
T ss_dssp TTSEEEEEETTTC--CEEEEEECCC---CCCEEEEEEET
T ss_pred CCCcEEEEECCCC--cEEEEEcCCCcceeeeEEEEECCC
Confidence 5799999999984 57777763 236778889884
No 153
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=39.59 E-value=18 Score=33.19 Aligned_cols=37 Identities=11% Similarity=-0.077 Sum_probs=26.5
Q ss_pred CCcEEEEEeCCCCCCCCceEEeCCC--CeEEEEecCCCCcC
Q psy17341 193 PDGVCLIWNTKFKKTTPEFEFFCQS--PVLSCCFAKFFFLY 231 (232)
Q Consensus 193 ~~GlVlvWslk~pk~~PEyvf~~~S--~V~~v~FsP~hPnL 231 (232)
.+|.|.||++... +.-..|.... .|.+++|||.-..|
T Consensus 303 ~DgTIkIWDl~tG--k~l~tL~gH~~~vvs~vafSPDG~~L 341 (356)
T 2w18_A 303 TSGTIAIWDLLLG--QCTALLPPVSDQHWSFVKWSGTDSHL 341 (356)
T ss_dssp TTSCEEEEETTTC--SEEEEECCC--CCCCEEEECSSSSEE
T ss_pred CCCcEEEEECCCC--cEEEEecCCCCCeEEEEEECCCCCEE
Confidence 4789999999884 5666675443 34568999986654
No 154
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=39.29 E-value=56 Score=29.99 Aligned_cols=61 Identities=13% Similarity=0.089 Sum_probs=38.7
Q ss_pred eeEeecCCCCCCeEEEEeccCCC------------------------CCCCCCcEEEEEeCCCCCCCCceEEeC------
Q psy17341 166 VTYMDWSTQHPELLLASYHRNKE------------------------APNEPDGVCLIWNTKFKKTTPEFEFFC------ 215 (232)
Q Consensus 166 VT~IdWsP~~~eL~aVSYgs~~~------------------------~~~~~~GlVlvWslk~pk~~PEyvf~~------ 215 (232)
++++.|||.-.-|+.+++..... +...+.+.|.+|++... . ....+..
T Consensus 175 ~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~-~-~~~~l~~~~~~~~ 252 (723)
T 1xfd_A 175 HIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGP-T-HDLEMMPPDDPRM 252 (723)
T ss_dssp SEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSS-C-CCEECCCCCCGGG
T ss_pred cceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCC-c-eeEEeeCCccCCC
Confidence 47899999877676666543110 00122358999999875 2 2334443
Q ss_pred -CCCeEEEEecCCC
Q psy17341 216 -QSPVLSCCFAKFF 228 (232)
Q Consensus 216 -~S~V~~v~FsP~h 228 (232)
...|.++.|||..
T Consensus 253 ~~~~~~~~~~SpDg 266 (723)
T 1xfd_A 253 REYYITMVKWATST 266 (723)
T ss_dssp SSEEEEEEEESSSS
T ss_pred ccceeEEEEEeCCC
Confidence 3578999999964
No 155
>4fxe_A Antitoxin RELB; toxin/antitoxin system, toxin, nuclease, translational contr response, RELB, ribosome, toxin-toxin inhibitor compl; 2.75A {Escherichia coli} PDB: 2k29_A 2kc8_B
Probab=38.32 E-value=15 Score=26.68 Aligned_cols=23 Identities=22% Similarity=0.440 Sum_probs=20.2
Q ss_pred chhHHHHHHHHHHhcCCcccccc
Q psy17341 3 DKDQRKELDSMLSSLGVAPVADV 25 (232)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~ 25 (232)
|++-++++++.|..||+++-+-|
T Consensus 9 D~~lK~~a~~v~~~lGl~~s~Ai 31 (79)
T 4fxe_A 9 DDELKARSYAALEKMGVTPSEAL 31 (79)
T ss_dssp CHHHHHHHHHHHHHHTCCHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCHHHHH
Confidence 77889999999999999986655
No 156
>3cuq_A Vacuolar-sorting protein SNF8; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_A
Probab=37.21 E-value=16 Score=31.84 Aligned_cols=21 Identities=29% Similarity=0.627 Sum_probs=18.6
Q ss_pred chhHHHHHHHHHHhcCCcccc
Q psy17341 3 DKDQRKELDSMLSSLGVAPVA 23 (232)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~ 23 (232)
|+.-|++..+|+.||||.|++
T Consensus 37 dp~fR~~F~~mc~siGVDPla 57 (234)
T 3cuq_A 37 NPEFRVQFQDMCATIGVDPLA 57 (234)
T ss_dssp CHHHHHHHHHHHHHHTCCTTS
T ss_pred CHHHHHHHHHHHHHcCCCccc
Confidence 456799999999999999887
No 157
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=36.18 E-value=52 Score=26.84 Aligned_cols=59 Identities=7% Similarity=-0.066 Sum_probs=39.1
Q ss_pred cceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCCc
Q psy17341 164 RNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFFL 230 (232)
Q Consensus 164 R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hPn 230 (232)
..|+++.|||.-.-|+.++.... ....-|.+|++... .+..+...+. |.++.|+|..-.
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~-----~~~~~l~~~~~~~g--~~~~l~~~~~-~~~~~wspdg~~ 117 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEE-----KKVSEIWVADLETL--SSKKILEAKN-IRSLEWNEDSRK 117 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETT-----TTEEEEEEEETTTT--EEEEEEEESE-EEEEEECTTSSE
T ss_pred ccCCCeEECCCCCEEEEEEeccC-----CCcceEEEEECCCC--ceEEEEcCCC-ccceeECCCCCE
Confidence 35888999998766665554321 12245777887753 4566666556 999999987543
No 158
>1u5t_A Appears to BE functionally related to SNF7; SNF8P; ESCRT, endosomal, trafficking, protein complex, transport protein; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54 PDB: 1w7p_A
Probab=35.09 E-value=15 Score=32.02 Aligned_cols=21 Identities=29% Similarity=0.551 Sum_probs=18.9
Q ss_pred chhHHHHHHHHHHhcCCcccc
Q psy17341 3 DKDQRKELDSMLSSLGVAPVA 23 (232)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~ 23 (232)
|+.-|+...+|+.|+||.|++
T Consensus 57 dp~fR~~F~~mc~siGVDPLa 77 (233)
T 1u5t_A 57 SPEFRSKFMHMCSSIGIDPLS 77 (233)
T ss_dssp CHHHHHHHHHHHHHHTCCHHH
T ss_pred CHHHHHHHHHHHHHcCCCCCc
Confidence 566899999999999999887
No 159
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=33.36 E-value=73 Score=31.51 Aligned_cols=52 Identities=6% Similarity=-0.201 Sum_probs=39.5
Q ss_pred CCcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCC
Q psy17341 162 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFF 228 (232)
Q Consensus 162 K~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~h 228 (232)
....|.+.+||| +.+|.++. |-|.+|++... .+..+...+..|.++.|||.-
T Consensus 13 ~~~~~~~~~~S~---~~iaf~~~----------~~l~~~~~~gg--~~~~lt~~~~~v~~~~~SPDG 64 (1045)
T 1k32_A 13 MPNLLLNPDIHG---DRIIFVCC----------DDLWEHDLKSG--STRKIVSNLGVINNARFFPDG 64 (1045)
T ss_dssp CCCCCEEEEEET---TEEEEEET----------TEEEEEETTTC--CEEEEECSSSEEEEEEECTTS
T ss_pred ccceEeCcEEeC---CEEEEEEC----------CcEEEEECCCC--cEEEeeeCCCcccCeEECCCC
Confidence 445789999995 56665554 57999999763 576666667789999999974
No 160
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=31.62 E-value=47 Score=30.55 Aligned_cols=63 Identities=6% Similarity=-0.066 Sum_probs=39.9
Q ss_pred eeEeecCCCCCCeEEEEeccCCC-----------------------CCCCCCcEEEEEeCCCCCCCCceEEe---CCCCe
Q psy17341 166 VTYMDWSTQHPELLLASYHRNKE-----------------------APNEPDGVCLIWNTKFKKTTPEFEFF---CQSPV 219 (232)
Q Consensus 166 VT~IdWsP~~~eL~aVSYgs~~~-----------------------~~~~~~GlVlvWslk~pk~~PEyvf~---~~S~V 219 (232)
+.++.|||.-.-|+.+++..... ......+.|.+|++... .+..+.. ....|
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~--~~~~~~~~~~~~~~~ 260 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATG--KTVYLQTGEPKEKFL 260 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTT--EEEECCCCSCTTCEE
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCC--ceEeeccCCCCceeE
Confidence 68999999877676666432110 01124578999999874 2333332 23578
Q ss_pred EEEEecCCCCc
Q psy17341 220 LSCCFAKFFFL 230 (232)
Q Consensus 220 ~~v~FsP~hPn 230 (232)
.++.|+|.--.
T Consensus 261 ~~~~~spdg~~ 271 (706)
T 2z3z_A 261 TNLSWSPDENI 271 (706)
T ss_dssp EEEEECTTSSE
T ss_pred eeEEEECCCCE
Confidence 99999997543
No 161
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=29.52 E-value=87 Score=25.84 Aligned_cols=57 Identities=7% Similarity=-0.171 Sum_probs=34.8
Q ss_pred ceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCce--EEeCCCCeEEEEecCCCC
Q psy17341 165 NVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEF--EFFCQSPVLSCCFAKFFF 229 (232)
Q Consensus 165 ~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEy--vf~~~S~V~~v~FsP~hP 229 (232)
.+.+|.|+|.-.-|+++..+ ..+.|.||++......... .+.+...+.+++|+|.--
T Consensus 260 ~~~~i~~spdg~~l~v~~~~--------~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~ 318 (361)
T 3scy_A 260 GSGDIHLSPDGKYLYASNRL--------KADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGK 318 (361)
T ss_dssp CEEEEEECTTSSEEEEEECS--------SSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSC
T ss_pred CcccEEECCCCCEEEEECCC--------CCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCC
Confidence 35688899876545444433 1468999998632123323 333445788899998643
No 162
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=28.02 E-value=34 Score=31.22 Aligned_cols=67 Identities=6% Similarity=-0.225 Sum_probs=42.8
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCC----CCCceEE-eCCCCeEEEEecCCCC
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKK----TTPEFEF-FCQSPVLSCCFAKFFF 229 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk----~~PEyvf-~~~S~V~~v~FsP~hP 229 (232)
...+.+++|||.-.-|+.++.............-|.+|++...+ ..+..+. .....+..+.|||.--
T Consensus 129 ~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~ 200 (662)
T 3azo_A 129 GLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGR 200 (662)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSS
T ss_pred CccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCC
Confidence 34688999999888788777653221111233678899987620 1344444 3456778888888643
No 163
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=27.62 E-value=65 Score=31.88 Aligned_cols=64 Identities=6% Similarity=-0.174 Sum_probs=39.8
Q ss_pred cceeEeecCCCCCCeEEEEecc-CCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCCc
Q psy17341 164 RNVTYMDWSTQHPELLLASYHR-NKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFFL 230 (232)
Q Consensus 164 R~VT~IdWsP~~~eL~aVSYgs-~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hPn 230 (232)
..|.+++|||.-.-|+.++... +.+ ....++.|.+|++... . +..+......+.++.|+|.-..
T Consensus 421 ~~v~~~~~SpDG~~la~~~~~~~~~~-~~~~~~~i~l~d~~~g-~-~~~l~~~~~~~~~~~~spdG~~ 485 (1045)
T 1k32_A 421 AMITDFTISDNSRFIAYGFPLKHGET-DGYVMQAIHVYDMEGR-K-IFAATTENSHDYAPAFDADSKN 485 (1045)
T ss_dssp SCCCCEEECTTSCEEEEEEEECSSTT-CSCCEEEEEEEETTTT-E-EEECSCSSSBEEEEEECTTSCE
T ss_pred CCccceEECCCCCeEEEEecCccccc-cCCCCCeEEEEECCCC-c-EEEeeCCCcccCCceEcCCCCE
Confidence 4578999999766555444432 111 1124589999999875 2 3333334457888999986543
No 164
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=27.39 E-value=93 Score=28.68 Aligned_cols=50 Identities=20% Similarity=-0.015 Sum_probs=37.4
Q ss_pred ceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeC--CCCCCCCceEEeCCCCeEEEEecC
Q psy17341 165 NVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNT--KFKKTTPEFEFFCQSPVLSCCFAK 226 (232)
Q Consensus 165 ~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWsl--k~pk~~PEyvf~~~S~V~~v~FsP 226 (232)
.+.++.++|.-.-|++++. +|.|.+|++ .. ......+.....+..+.|||
T Consensus 180 ~~~~v~~spdg~~l~v~~~----------d~~V~v~D~~~~t--~~~~~~i~~g~~p~~va~sp 231 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGR----------DARIDMIDLWAKE--PTKVAEIKIGIEARSVESSK 231 (543)
T ss_dssp TEEEEEECTTSCEEEEEET----------TSEEEEEETTSSS--CEEEEEEECCSEEEEEEECC
T ss_pred ccceEEECCCCCEEEEECC----------CCeEEEEECcCCC--CcEEEEEecCCCcceEEeCC
Confidence 4778888887666665542 378999999 44 34666777778899999999
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=24.37 E-value=69 Score=30.24 Aligned_cols=60 Identities=10% Similarity=-0.025 Sum_probs=38.1
Q ss_pred eEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCCC
Q psy17341 167 TYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFFF 229 (232)
Q Consensus 167 T~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~hP 229 (232)
.++.|||.-. .+|.+++....-.....|-+.+|++... ....+...+..+..+.|||.--
T Consensus 65 ~~~~~Spdg~-~l~~~~~~~~~~r~~~~~~~~~~d~~~~--~~~~l~~~~~~~~~~~~SPdG~ 124 (740)
T 4a5s_A 65 NDYSISPDGQ-FILLEYNYVKQWRHSYTASYDIYDLNKR--QLITEERIPNNTQWVTWSPVGH 124 (740)
T ss_dssp CEEEECTTSS-EEEEEEEEEECSSSCEEEEEEEEETTTT--EECCSSCCCTTEEEEEECSSTT
T ss_pred cceEECCCCC-EEEEEECCeeeEEEccceEEEEEECCCC--cEEEcccCCCcceeeEECCCCC
Confidence 4589998754 4444444322212234588999999875 2333444467899999999743
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=24.31 E-value=93 Score=26.15 Aligned_cols=57 Identities=11% Similarity=-0.126 Sum_probs=36.8
Q ss_pred ceeEee-cCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCCceE---EeC-CCCeEEEEecC
Q psy17341 165 NVTYMD-WSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFE---FFC-QSPVLSCCFAK 226 (232)
Q Consensus 165 ~VT~Id-WsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~PEyv---f~~-~S~V~~v~FsP 226 (232)
.+.+|+ |+|.-.-|+++..+.+. ...|.|.+|++... .....+ ... ...+..++|+|
T Consensus 255 ~~~~i~~~spdG~~l~v~~~~~~~----~~~~~i~v~~~~~~-g~~~~~~~~~~~~~~~~~~~a~sp 316 (365)
T 1jof_A 255 YRADVCALTFSGKYMFASSRANKF----ELQGYIAGFKLRDC-GSIEKQLFLSPTPTSGGHSNAVSP 316 (365)
T ss_dssp EEEEEEEECTTSSEEEEEEEESST----TSCCEEEEEEECTT-SCEEEEEEEEECSSCCTTCCCEEE
T ss_pred ccccEEEECCCCCEEEEECCCCCC----CCCCeEEEEEECCC-CCEEEeeeeeecCCCCcccceecC
Confidence 588999 99987666655555431 24689999998632 445442 222 34567777887
No 167
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=23.75 E-value=57 Score=30.14 Aligned_cols=61 Identities=10% Similarity=0.019 Sum_probs=36.6
Q ss_pred ceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCCCCCCCC-ceEEeCCCCeEEEEecCCCC
Q psy17341 165 NVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTP-EFEFFCQSPVLSCCFAKFFF 229 (232)
Q Consensus 165 ~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk~pk~~P-Eyvf~~~S~V~~v~FsP~hP 229 (232)
.|.+++|||.-.- +|.+......-....+|.|.+|++...+.-+ ..+ ...|.++.|||.--
T Consensus 61 ~~~~~~~SpDg~~-la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~ 122 (719)
T 1z68_A 61 NASNYGLSPDRQF-VYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGS 122 (719)
T ss_dssp TCSEEEECTTSSE-EEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTT
T ss_pred ceeeEEECCCCCe-EEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCC
Confidence 4899999996554 4433332111112246899999997642100 221 35789999999754
No 168
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=21.31 E-value=1.2e+02 Score=24.54 Aligned_cols=60 Identities=15% Similarity=0.214 Sum_probs=35.4
Q ss_pred eeEeecCCCCCCeEEEEeccCC-----------CC------CCCCCcEEEEEeCCCCCCCCceEEeCCCCeEEEEecCCC
Q psy17341 166 VTYMDWSTQHPELLLASYHRNK-----------EA------PNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFF 228 (232)
Q Consensus 166 VT~IdWsP~~~eL~aVSYgs~~-----------~~------~~~~~GlVlvWslk~pk~~PEyvf~~~S~V~~v~FsP~h 228 (232)
|.++.|+|.-.-|+.++..... +. .....+-|.+|++... .+...+..+ .|.++.|+|..
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~--~~~~~l~~~-~~~~~~~spdg 182 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE--EVIEEFEKP-RFSSGIWHRDK 182 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTT--EEEEEEEEE-TTCEEEEETTE
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC--eEEeeecCC-CcccccCCCCe
Confidence 8999999987666666643100 00 0011357888998764 331223324 88888888753
No 169
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=20.60 E-value=1.9e+02 Score=24.15 Aligned_cols=59 Identities=7% Similarity=-0.192 Sum_probs=36.1
Q ss_pred CcceeEeecCCCCCCeEEEEeccCCCCCCCCCcEEEEEeCC-CCCCCCceEEe--C-CCCeEEEEecCCCCc
Q psy17341 163 NRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTK-FKKTTPEFEFF--C-QSPVLSCCFAKFFFL 230 (232)
Q Consensus 163 ~R~VT~IdWsP~~~eL~aVSYgs~~~~~~~~~GlVlvWslk-~pk~~PEyvf~--~-~S~V~~v~FsP~hPn 230 (232)
...+.+|.|+|.-.-|+++..+ .+.|.+|++. .-+..+...+. . ...+..+.|+|.--.
T Consensus 144 ~~~~~~~~~spdG~~l~~~~~~---------~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~ 206 (365)
T 1jof_A 144 NTGIHGMVFDPTETYLYSADLT---------ANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNY 206 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETT---------TTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSE
T ss_pred CCcceEEEECCCCCEEEEEcCC---------CCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCE
Confidence 4578999999976545444332 3578899987 32111222233 2 457888999986543
Done!