BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17342
(401 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q24246|DYIN_DROME Cytoplasmic dynein 1 intermediate chain OS=Drosophila melanogaster
GN=sw PE=1 SV=3
Length = 663
Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust.
Identities = 217/346 (62%), Positives = 279/346 (80%), Gaps = 2/346 (0%)
Query: 44 DEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWN 103
DE+S +LS R F+DE+WSKNR +T MDWST PEL++ SYH N+E+PNEPDGV ++WN
Sbjct: 292 DERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPELVVGSYHNNEESPNEPDGVVMVWN 351
Query: 104 TKFKKTTPEFEFFCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSV 163
TKFKK+TPE F CQS V+S CFAKFNP LILGGTYSGQIVLWD RVQK+TP+ RTPLS
Sbjct: 352 TKFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQIVLWDNRVQKRTPIQRTPLSA 411
Query: 164 MAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVL 223
AHTHPV+C+ ++GTQNAHN+ISIS+DG+LCSWSL+MLS PQ+T +LQ +Q+K +A+
Sbjct: 412 AAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQ--QRQSKAIAIT 469
Query: 224 SLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSH 283
S+AFP N++N+ V+G EDG VYSA RHG ++G E YE H GP+ G+S+H Q DF H
Sbjct: 470 SMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNEVYERHLGPITGISTHYNQLSPDFGH 529
Query: 284 LYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLN 343
L+LTSS DW++KLW++K+ KP++SF + DYVMDV WSP++PALFA V+ +GR+DLWNLN
Sbjct: 530 LFLTSSIDWTIKLWSLKDTKPLYSFEDNSDYVMDVAWSPVHPALFAAVDGSGRLDLWNLN 589
Query: 344 LDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
DTEVP S +V GAPAL+RV+WTP+G +C+GDE G + ++DV E
Sbjct: 590 QDTEVPTASIVVAGAPALNRVSWTPSGLHVCIGDEAGKLYVYDVAE 635
>sp|O88487|DC1I2_MOUSE Cytoplasmic dynein 1 intermediate chain 2 OS=Mus musculus
GN=Dync1i2 PE=2 SV=1
Length = 612
Score = 483 bits (1244), Expect = e-136, Method: Compositional matrix adjust.
Identities = 221/355 (62%), Positives = 285/355 (80%), Gaps = 3/355 (0%)
Query: 35 QDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNE 94
+DL+ D G+ ++ KLS RQFFDE+WSK+R V+ +DWS+Q+PELL+ASY+ N+EAP+E
Sbjct: 224 RDLE-DKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEEAPHE 282
Query: 95 PDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKT 154
PDGV L+WN K+KKTTPE+ F CQS V+S FAKF+P L++GGTYSGQIVLWD R K+T
Sbjct: 283 PDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRT 342
Query: 155 PVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNN 214
PV RTPLS AHTHPV+C++V+GTQNAHNLISIS DG++CSWSL+MLS PQ++ +L +
Sbjct: 343 PVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVH-- 400
Query: 215 KQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHR 274
KQ+K +AV S++FP DVNNFVVG E+G+VY+ACRHG+KAG E +EGH+GP+ G+ H
Sbjct: 401 KQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHA 460
Query: 275 AQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVA 334
A G +DFSHL++TSS+DW+VKLW K NKP++SF + DYV DV WSP +PALFA V+
Sbjct: 461 AVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGM 520
Query: 335 GRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
GR+DLWNLN DTEVP S VEG PAL+RV WT +G ++ VGD +G I ++DVGE
Sbjct: 521 GRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGE 575
>sp|O88485|DC1I1_MOUSE Cytoplasmic dynein 1 intermediate chain 1 OS=Mus musculus
GN=Dync1i1 PE=1 SV=2
Length = 628
Score = 483 bits (1243), Expect = e-135, Method: Compositional matrix adjust.
Identities = 217/350 (62%), Positives = 279/350 (79%), Gaps = 2/350 (0%)
Query: 43 GDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIW 102
GD ++ LSF RQF+DE WSK+R VT MDWS Q+PEL++ASY N++AP+EPDGV L+W
Sbjct: 248 GDVQAGANLSFNRQFYDEHWSKHRVVTCMDWSLQYPELMVASYSNNEDAPHEPDGVALVW 307
Query: 103 NTKFKKTTPEFEFFCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLS 162
N KFKKTTPE+ F CQS V+S CFA+F+P L++GGTYSGQIVLWD R ++TPV RTPLS
Sbjct: 308 NMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLS 367
Query: 163 VMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAV 222
AHTHPV+C++V+GTQNAHNLI++S DG++CSWSL+MLS+PQE+ +L YN ++K +AV
Sbjct: 368 AAAHTHPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLSTPQESMELVYN--KSKPVAV 425
Query: 223 LSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFS 282
+AFP DVNNFVVG E+G VY+ACRHG+KAG E +EGH+GPV G++ H A G IDFS
Sbjct: 426 TGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIGEVFEGHQGPVTGINCHMAVGPIDFS 485
Query: 283 HLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNL 342
HL++TSS+DW+VKLW K NKP++SF + DYV DV WSP++PALFA V+ GR+DLWNL
Sbjct: 486 HLFVTSSFDWTVKLWTTKHNKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRLDLWNL 545
Query: 343 NLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGEVGI 392
N DTEVP S +EGA AL+RV W G ++ VGD +G I ++DVGE+ +
Sbjct: 546 NSDTEVPTASVAIEGASALNRVRWAQGGKEVAVGDSEGRIWIYDVGELAV 595
>sp|Q0III3|DC1I2_BOVIN Cytoplasmic dynein 1 intermediate chain 2 OS=Bos taurus GN=DYNC1I2
PE=1 SV=1
Length = 612
Score = 482 bits (1241), Expect = e-135, Method: Compositional matrix adjust.
Identities = 220/355 (61%), Positives = 285/355 (80%), Gaps = 3/355 (0%)
Query: 35 QDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNE 94
+DL+ D G+ ++ KLS RQFFDE+WSK+R V+ +DWS+Q+PELL+ASY+ N++AP+E
Sbjct: 224 RDLE-DKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHE 282
Query: 95 PDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKT 154
PDGV L+WN K+KKTTPE+ F CQS V+S FAKF+P L++GGTYSGQIVLWD R K+T
Sbjct: 283 PDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRT 342
Query: 155 PVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNN 214
PV RTPLS AHTHPV+C++V+GTQNAHNLISIS DG++CSWSL+MLS PQ++ +L +
Sbjct: 343 PVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVH-- 400
Query: 215 KQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHR 274
KQ+K +AV S++FP DVNNFVVG E+G+VY+ACRHG+KAG E +EGH+GP+ G+ H
Sbjct: 401 KQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHS 460
Query: 275 AQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVA 334
A G +DFSHL++TSS+DW+VKLW K NKP++SF + DYV DV WSP +PALFA V+
Sbjct: 461 AVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGM 520
Query: 335 GRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
GR+DLWNLN DTEVP S VEG PAL+RV WT +G ++ VGD +G I ++DVGE
Sbjct: 521 GRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGE 575
>sp|Q29RQ3|DC1I1_BOVIN Cytoplasmic dynein 1 intermediate chain 1 OS=Bos taurus GN=DYNC1I1
PE=1 SV=1
Length = 608
Score = 482 bits (1241), Expect = e-135, Method: Compositional matrix adjust.
Identities = 217/350 (62%), Positives = 280/350 (80%), Gaps = 2/350 (0%)
Query: 43 GDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIW 102
GD ++ LSF RQF+DE WSK+R VT MDWS Q+PEL++ASY+ N++AP+EPDGV L+W
Sbjct: 228 GDVQAGANLSFNRQFYDEHWSKHRVVTCMDWSLQYPELMVASYNNNEDAPHEPDGVALVW 287
Query: 103 NTKFKKTTPEFEFFCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLS 162
N KFKKTTPE+ F CQS V+S CFA+F+P L++GGTYSGQIVLWD R ++TPV RTPLS
Sbjct: 288 NMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLS 347
Query: 163 VMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAV 222
AHTHPV+C++V+GTQNAHNLI++S DG++CSWSL+MLS+PQE+ +L YN ++K +AV
Sbjct: 348 AAAHTHPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLSTPQESMELVYN--KSKPVAV 405
Query: 223 LSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFS 282
+AFP DVNNFVVG E+G VY+ACRHG+KAG E +EGH+GPV G++ H A G IDFS
Sbjct: 406 TGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIGEVFEGHQGPVTGINCHMAVGPIDFS 465
Query: 283 HLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNL 342
HL++TSS+DW+VKLW K NKP++SF + DYV DV WSP++PALFA V+ GR+DLWNL
Sbjct: 466 HLFVTSSFDWTVKLWTTKHNKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRLDLWNL 525
Query: 343 NLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGEVGI 392
N DTEVP S +EGA AL+RV W G ++ VGD +G I ++DVGE+ +
Sbjct: 526 NNDTEVPTASVAIEGASALNRVRWAQGGKEVAVGDSEGRIWIYDVGELAV 575
>sp|O14576|DC1I1_HUMAN Cytoplasmic dynein 1 intermediate chain 1 OS=Homo sapiens
GN=DYNC1I1 PE=1 SV=2
Length = 645
Score = 482 bits (1240), Expect = e-135, Method: Compositional matrix adjust.
Identities = 217/350 (62%), Positives = 280/350 (80%), Gaps = 2/350 (0%)
Query: 43 GDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIW 102
GD ++ LSF RQF+DE WSK+R VT MDWS Q+PEL++ASY+ N++AP+EPDGV L+W
Sbjct: 265 GDVQAGANLSFNRQFYDEHWSKHRVVTCMDWSLQYPELMVASYNNNEDAPHEPDGVALVW 324
Query: 103 NTKFKKTTPEFEFFCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLS 162
N KFKKTTPE+ F CQS V+S CFA+F+P L++GGTYSGQIVLWD R ++TPV RTPLS
Sbjct: 325 NMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLS 384
Query: 163 VMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAV 222
AHTHPV+C++V+GTQNAHNLI++S DG++CSWSL+MLS+PQE+ +L YN ++K +AV
Sbjct: 385 AAAHTHPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLSTPQESMELVYN--KSKPVAV 442
Query: 223 LSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFS 282
+AFP DVNNFVVG E+G VY+ACRHG+KAG E +EGH+GPV G++ H A G IDFS
Sbjct: 443 TGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIGEVFEGHQGPVTGINCHMAVGPIDFS 502
Query: 283 HLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNL 342
HL++TSS+DW+VKLW K NKP++SF + DYV DV WSP++PALFA V+ GR+DLWNL
Sbjct: 503 HLFVTSSFDWTVKLWTTKHNKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRLDLWNL 562
Query: 343 NLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGEVGI 392
N DTEVP S +EGA AL+RV W G ++ VGD +G I ++DVGE+ +
Sbjct: 563 NNDTEVPTASVAIEGASALNRVRWAQAGKEVAVGDSEGRIWVYDVGELAV 612
>sp|Q63100|DC1I1_RAT Cytoplasmic dynein 1 intermediate chain 1 OS=Rattus norvegicus
GN=Dync1i1 PE=1 SV=1
Length = 643
Score = 481 bits (1237), Expect = e-135, Method: Compositional matrix adjust.
Identities = 217/350 (62%), Positives = 279/350 (79%), Gaps = 2/350 (0%)
Query: 43 GDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIW 102
GD ++ LSF RQF+DE WSK+R VT MDWS Q+PEL++ASY N++AP+EPDGV L+W
Sbjct: 263 GDVQAGANLSFNRQFYDEHWSKHRVVTCMDWSLQYPELMVASYSNNEDAPHEPDGVALVW 322
Query: 103 NTKFKKTTPEFEFFCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLS 162
N KFKKTTPE+ F CQS V+S CFA+F+P L++GGTYSGQIVLWD R ++TPV RTPLS
Sbjct: 323 NMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLS 382
Query: 163 VMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAV 222
AHTHPV+C++V+GTQNAHNLI++S DG++CSWSL+MLS+PQE+ +L YN ++K +AV
Sbjct: 383 AAAHTHPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLSTPQESMELVYN--KSKPVAV 440
Query: 223 LSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFS 282
+AFP DVNNFVVG E+G VY+ACRHG+KAG E +EGH+GPV G++ H A G IDFS
Sbjct: 441 TGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIGEVFEGHQGPVTGINCHMAVGPIDFS 500
Query: 283 HLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNL 342
HL++TSS+DW+VKLW K NKP++SF + DYV DV WSP++PALFA V+ GR+DLWNL
Sbjct: 501 HLFVTSSFDWTVKLWTTKHNKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRLDLWNL 560
Query: 343 NLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGEVGI 392
N DTEVP S +EGA AL+RV W G ++ VGD +G I ++DVGE+ +
Sbjct: 561 NSDTEVPTASVAIEGAYALNRVRWAQGGKEVAVGDSEGRIWIYDVGELAV 610
>sp|Q5NVM2|DC1I2_PONAB Cytoplasmic dynein 1 intermediate chain 2 OS=Pongo abelii
GN=DYNC1I2 PE=2 SV=1
Length = 638
Score = 480 bits (1236), Expect = e-135, Method: Compositional matrix adjust.
Identities = 220/355 (61%), Positives = 285/355 (80%), Gaps = 3/355 (0%)
Query: 35 QDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNE 94
+DL+ D G+ ++ KLS RQFFDE+WSK+R V+ +DWS+Q+PELL+ASY+ N++AP+E
Sbjct: 250 RDLE-DKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHE 308
Query: 95 PDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKT 154
PDGV L+WN K+KKTTPE+ F CQS V+S FAKF+P L++GGTYSGQIVLWD R K+T
Sbjct: 309 PDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRT 368
Query: 155 PVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNN 214
PV RTPLS AHTHPV+C++V+GTQNAHNLISIS DG++CSWSL+MLS PQ++ +L +
Sbjct: 369 PVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVH-- 426
Query: 215 KQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHR 274
KQ+K +AV S++FP DVNNFVVG E+G+VY+ACRHG+KAG E +EGH+GP+ G+ H
Sbjct: 427 KQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHA 486
Query: 275 AQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVA 334
A G +DFSHL++TSS+DW+VKLW K NKP++SF + DYV DV WSP +PALFA V+
Sbjct: 487 AVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALFACVDGM 546
Query: 335 GRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
GR+DLWNLN DTEVP S VEG PAL+RV WT +G ++ VGD +G I ++DVGE
Sbjct: 547 GRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGE 601
>sp|Q13409|DC1I2_HUMAN Cytoplasmic dynein 1 intermediate chain 2 OS=Homo sapiens
GN=DYNC1I2 PE=1 SV=3
Length = 638
Score = 480 bits (1236), Expect = e-135, Method: Compositional matrix adjust.
Identities = 220/355 (61%), Positives = 285/355 (80%), Gaps = 3/355 (0%)
Query: 35 QDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNE 94
+DL+ D G+ ++ KLS RQFFDE+WSK+R V+ +DWS+Q+PELL+ASY+ N++AP+E
Sbjct: 250 RDLE-DKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHE 308
Query: 95 PDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKT 154
PDGV L+WN K+KKTTPE+ F CQS V+S FAKF+P L++GGTYSGQIVLWD R K+T
Sbjct: 309 PDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRT 368
Query: 155 PVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNN 214
PV RTPLS AHTHPV+C++V+GTQNAHNLISIS DG++CSWSL+MLS PQ++ +L +
Sbjct: 369 PVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVH-- 426
Query: 215 KQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHR 274
KQ+K +AV S++FP DVNNFVVG E+G+VY+ACRHG+KAG E +EGH+GP+ G+ H
Sbjct: 427 KQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHA 486
Query: 275 AQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVA 334
A G +DFSHL++TSS+DW+VKLW K NKP++SF + DYV DV WSP +PALFA V+
Sbjct: 487 AVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALFACVDGM 546
Query: 335 GRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
GR+DLWNLN DTEVP S VEG PAL+RV WT +G ++ VGD +G I ++DVGE
Sbjct: 547 GRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGE 601
>sp|Q62871|DC1I2_RAT Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus
GN=Dync1i2 PE=1 SV=1
Length = 638
Score = 478 bits (1231), Expect = e-134, Method: Compositional matrix adjust.
Identities = 220/355 (61%), Positives = 285/355 (80%), Gaps = 3/355 (0%)
Query: 35 QDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNE 94
+DL+ D G+ ++ KLS RQFFDE+WSK+R V+ +DWS+Q+PELL+ASY+ N+EAP+E
Sbjct: 250 RDLE-DKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEEAPHE 308
Query: 95 PDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKT 154
PDGV L+WN K+KKTTPE+ F CQS V+S FAKF+P L++GGTYSGQIVLWD R K+T
Sbjct: 309 PDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRT 368
Query: 155 PVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNN 214
PV RTPLS AHTHPV+C++V+GTQNAHNLISIS DG++CSWSL+MLS PQ++ +L +
Sbjct: 369 PVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVH-- 426
Query: 215 KQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHR 274
KQ+K +AV S++FP DVNNFVVG E+G+VY+ACRHG+KAG E +EGH+GP+ G+ H
Sbjct: 427 KQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHA 486
Query: 275 AQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVA 334
A G +DFSHL++TSS+DW+VKLW+ K NKP++SF + DYV DV SP +PALFA V+
Sbjct: 487 AVGAVDFSHLFVTSSFDWTVKLWSTKNNKPLYSFEDNSDYVYDVIGSPTHPALFACVDGM 546
Query: 335 GRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
GR+DLWNLN DTEVP S VEG PAL+RV WT +G ++ VGD +G I ++DVGE
Sbjct: 547 GRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGE 601
>sp|P54703|DYIN_DICDI Cytoplasmic dynein 1 intermediate chain OS=Dictyostelium discoideum
GN=dicA PE=2 SV=2
Length = 654
Score = 334 bits (856), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 163/375 (43%), Positives = 248/375 (66%), Gaps = 25/375 (6%)
Query: 36 DLQFDMT-GDEKS---STKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEA 91
D+ D T DE S S +L DE+W+K+R++T + WST+HPEL+++SY N+
Sbjct: 246 DILVDYTISDENSKGTSKELKLLATLSDERWTKHRSITDISWSTKHPELVVSSYSANEAG 305
Query: 92 PNEPDGVCLIW--NTKFKKTTPEFEFFCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTR 149
++PDGV L+W N F+K PE+ F CQSPV++ F+KF+ LI+GGTYSGQIV+WDTR
Sbjct: 306 SHDPDGVALVWSVNNYFQK--PEYVFTCQSPVMTTFFSKFHSTLIVGGTYSGQIVIWDTR 363
Query: 150 VQKKTPVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRD 209
+ K PV +TPLS + HTHPV+ M+V+G+ NA++L+SIS D +LCSW+LE LS P ET +
Sbjct: 364 AEAK-PVQKTPLSSVGHTHPVYSMAVVGSANANSLVSISTDAKLCSWNLENLSQPIETIE 422
Query: 210 LQYNNKQTKN---------------LAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKA 254
L +N + N +AV SL FP+N++N+F +G E+G + A RHGN+
Sbjct: 423 LNSSNTNSANKAGGGGSGGGAPNMSIAVTSLVFPENELNHFYIGTEEGVICQAGRHGNRI 482
Query: 255 GNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDY 314
E Y+GH GP+ + H ++G DFS +L+SS DW+ KLW+ K+ P++SF ++ DY
Sbjct: 483 VMNERYKGHFGPITSVDLHPSKGGADFSQYFLSSSTDWTCKLWSSKKETPLYSFEDYVDY 542
Query: 315 VMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLC 374
V D +WSP++P++F+T + +G + LW+LN D E P + +++R+ W+ +G ++
Sbjct: 543 VYDARWSPVHPSIFSTGDGSGTLSLWDLNQDLEAPIFRHKISNR-SVNRLAWSHDGKRIL 601
Query: 375 VGDEKGAITMFDVGE 389
VGD G++++FD E
Sbjct: 602 VGDSGGSLSLFDSSE 616
>sp|O94518|DIC1_SCHPO Dynein intermediate chain 1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=dic1 PE=1 SV=2
Length = 544
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 176/358 (49%), Gaps = 35/358 (9%)
Query: 57 FFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFF 116
F DEK + N V + +S+ ELL+ SY + KEA G+ ++WN ++K +PE
Sbjct: 184 FQDEKITLNSVVNSISYSSFFEELLITSYAKPKEAL-RTRGLAIVWNQRWK-NSPESVLK 241
Query: 117 CQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVI 176
+S + C + F+P LI GG Y+GQ+ LWD R Q + PV T + H PV ++ I
Sbjct: 242 ARSEITVCKPSPFHPQLIAGGAYNGQVFLWDLR-QGQYPVSFTTIISGGHLEPVTDITYI 300
Query: 177 GTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYN-NKQTKNLAVLSLAF-PQNDVNN 234
++N+++ S DG + W +M S P ET L + ++ + L+F P+N++
Sbjct: 301 NNPPSNNIVTCSTDGLVHIWEPDMFSRPSETICLSSQVDSSSQCIPATCLSFIPENNME- 359
Query: 235 FVVGCEDGNVYSACR------HGNKAGNVECYEGHEGPVVGLSSHRAQGHIDF----SHL 284
F+VG EDG + R + NV YEGH + G+ + F
Sbjct: 360 FLVGAEDGKLQRGYRSDYSETKAVQPSNVS-YEGHNVFISGIDVMTSNSQNVFLEKNKDF 418
Query: 285 YLTSSYDWSVKLW---------------NIKENKPVHSFNEF--RDYVMDVQWSPINPAL 327
LTSS+DW+V+LW ++ E ++S F + V DV+W P
Sbjct: 419 ALTSSFDWTVRLWQCSPSRNQHELVPSNDLDEQVIINSCKTFTHKAMVFDVKWCVSEPCC 478
Query: 328 FATVEVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMF 385
FA+V+ G ++LW+L D E P TS I +G P L+++ W P L G G + ++
Sbjct: 479 FASVDALGNLNLWDLQKDVEAPVTSDIPDGKP-LNKIAWQPEKRNLACGGLNGNVHIY 535
>sp|A2AC93|DNAI2_MOUSE Dynein intermediate chain 2, axonemal OS=Mus musculus GN=Dnai2 PE=1
SV=2
Length = 623
Score = 112 bits (280), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 146/331 (44%), Gaps = 17/331 (5%)
Query: 65 NRNVTYMDWSTQHPELLLASYH--RNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVL 122
R T++ W L +Y + + AP + IW+ + PE SP++
Sbjct: 162 KRTATHLSWHPDGNRKLAVAYSCLKFQRAPMSMNYDSYIWDLE-NPNRPEIALKPLSPLV 220
Query: 123 SCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIGTQNAH 182
+ + + +++LGG Y+GQI WDTR K + V +H PV+ + ++
Sbjct: 221 TLEYNPKDSHVLLGGCYNGQIACWDTR--KGSLVAELSTIEFSHRDPVYGTIWLQSKTGT 278
Query: 183 NLISISNDGRLCSWSLEMLSSPQET--RDLQYNNKQTKNLAVLSLAFPQNDVNNFVVGCE 240
S S DG++ W + +S P E D+ + L +SL F F+VG E
Sbjct: 279 ECFSASTDGQVMWWDIRKISEPIEVVIMDISRKEQLENALGAISLEFESTLPTKFMVGTE 338
Query: 241 DGNVYSACRHGN-KAGNVEC-YEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWN 298
G V S R +A + C + GH GP+ L Q + + +LT DW+ ++W+
Sbjct: 339 QGIVISCNRKAKTQAEKIVCTFYGHHGPIYAL-----QRNPFYPKNFLTVG-DWTARIWS 392
Query: 299 IKENKPVHSFNEFR-DYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEG 357
+ + ++ Y+ D WSP+ PA+F T ++ G +D+W+L PA S V
Sbjct: 393 EDSRESSIMWTKYHMAYLSDGAWSPVRPAVFFTTKMDGTLDIWDLVFKQCDPALSLKVCD 452
Query: 358 APALSRVTWTPNGTQLCVGDEKGAITMFDVG 388
P + NG + G E G T+ +V
Sbjct: 453 DPLFC-LRVQDNGCLIACGSELGTTTLLEVS 482
>sp|Q66HC9|DNAI2_RAT Dynein intermediate chain 2, axonemal OS=Rattus norvegicus GN=Dnai2
PE=2 SV=1
Length = 619
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 146/331 (44%), Gaps = 19/331 (5%)
Query: 65 NRNVTYMDWSTQHPELLLASYH--RNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVL 122
R T++ W + L +Y + + +P IW+ + PE SP++
Sbjct: 162 KRTATHLSWHPDGNKKLAVAYSCLQFQRSPMGMSHDSYIWDLE-NPNRPEIALKPSSPLI 220
Query: 123 SCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIGTQNAH 182
+ + + +++LGG Y+GQI WDTR K + V +H PV+ + ++
Sbjct: 221 TLEYNPKDSHVLLGGCYNGQIACWDTR--KGSLVAELSTIEFSHRDPVYGTIWLQSKTGT 278
Query: 183 NLISISNDGRLCSWSLEMLSSPQET--RDLQYNNKQTKNLAVLSLAFPQNDVNNFVVGCE 240
S S DG++ W + +S P E D+ + L +SL F F+VG E
Sbjct: 279 ECFSASTDGQVMWWDIRKISEPTEVVIMDITRKEQLENALGAISLEFESTLPTKFMVGTE 338
Query: 241 DGNVYSACRHGNK-AGNVEC-YEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWN 298
G V S R A + C + GH GP+ L Q + + +LT DW+ ++W+
Sbjct: 339 QGIVISCNRKAKTPAEKIVCTFSGHHGPIYAL-----QRNPFYPKNFLTVG-DWAARIWS 392
Query: 299 IKENKPVHSFNEFR-DYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEG 357
+ + + + Y+ D WSP+ PA+F T ++ G +D+W+L PA S V
Sbjct: 393 EESRESSIMWTRYHMAYLSDGAWSPVRPAVFFTTKMDGTLDIWDLVFKQCDPALSLKVCD 452
Query: 358 APALS-RVTWTPNGTQLCVGDEKGAITMFDV 387
P RV T G + G E G T+ +V
Sbjct: 453 DPLFCLRVQDT--GCLIACGSELGTTTLLEV 481
>sp|Q9GZS0|DNAI2_HUMAN Dynein intermediate chain 2, axonemal OS=Homo sapiens GN=DNAI2 PE=1
SV=2
Length = 605
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 143/331 (43%), Gaps = 17/331 (5%)
Query: 65 NRNVTYMDWSTQHPELLLASYH--RNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVL 122
R T++ W L +Y + AP IW+ + PE SP++
Sbjct: 162 KRAATHLSWHPDGNRKLAVAYSCLDFQRAPVGMSSDSYIWDLE-NPNKPELALKPSSPLV 220
Query: 123 SCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIGTQNAH 182
+ F + +++LGG Y+GQI WDTR K + V +H PV+ + ++
Sbjct: 221 TLEFNPKDSHVLLGGCYNGQIACWDTR--KGSLVAELSTIESSHRDPVYGTIWLQSKTGT 278
Query: 183 NLISISNDGRLCSWSLEMLSSPQETRDLQYNNK-QTKN-LAVLSLAFPQNDVNNFVVGCE 240
S S DG++ W + +S P E L K Q +N L +SL F F+VG E
Sbjct: 279 ECFSASTDGQVMWWDIRKMSEPTEVVILDITKKEQLENALGAISLEFESTLPTKFMVGTE 338
Query: 241 DGNVYSACRHGN-KAGNVEC-YEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWN 298
G V S R A + C + GH GP+ L Q + + +LT DW+ ++W+
Sbjct: 339 QGIVISCNRKAKTSAEKIVCTFPGHHGPIYAL-----QRNPFYPKNFLTVG-DWTARIWS 392
Query: 299 IKENKPVHSFNEFR-DYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEG 357
+ + ++ Y+ D WSP+ P +F T + G +D+W+ + P S V
Sbjct: 393 EDSRESSIMWTKYHMAYLTDAAWSPVRPTVFFTTRMDGTLDIWDFMFEQCDPTLSLKV-C 451
Query: 358 APALSRVTWTPNGTQLCVGDEKGAITMFDVG 388
AL + NG + G + G T+ +V
Sbjct: 452 DEALFCLRVQDNGCLIACGSQLGTTTLLEVS 482
>sp|P27766|DYI3_CHLRE Dynein, 70 kDa intermediate chain, flagellar outer arm
OS=Chlamydomonas reinhardtii GN=ODA6 PE=1 SV=1
Length = 567
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 152/335 (45%), Gaps = 29/335 (8%)
Query: 66 RNVTYMDWSTQH--PELLLASYHRNKEAPNEPDGVCL---IWNTKFKKTTPEFEFFCQSP 120
R+ +Y++W P++++A + + +P G+ L IW+ TPE+E P
Sbjct: 162 RSASYVNWHPDGSVPKVVVA--YSILQFQQQPAGMPLSSYIWDVN-NPNTPEYEMV---P 215
Query: 121 VLSCCFAKFNPY---LILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIG 177
C AKFN L+ G Y+GQ+ +D R + PV TP+ + +H P++ + +
Sbjct: 216 TSQICCAKFNLKDNNLVGAGQYNGQLAYFDVR-KGNGPVEATPIDI-SHRDPIYDFAWLQ 273
Query: 178 TQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLSLAFPQN-DVNNFV 236
++ +++S DG + W L ++ E L+ N +T + + L + N NF+
Sbjct: 274 SKTGTECMTVSTDGNVLWWDLRKMNECVENMPLKEKNSET-TVGGVCLEYDTNAGPTNFM 332
Query: 237 VGCEDGNVYSACRHGNKAGNVECY--EGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSV 294
VG E G ++S R + Y GH GP+ GL + F+ Y S DW+
Sbjct: 333 VGTEQGQIFSCNRKAKNPVDRVKYVLSGHHGPIYGLRRN------PFNSKYFLSIGDWTA 386
Query: 295 KLW--NIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATS 352
++W + P+ + Y+ WSP P +F T+++ G +D+W+L P +
Sbjct: 387 RVWVEDTAVKTPILTTKYHPTYLTGGTWSPSRPGVFFTIKMDGAMDVWDLYYKHNEPTLT 446
Query: 353 AIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDV 387
V AL+ +G + VG G ++ +
Sbjct: 447 VQVSDL-ALTAFAVQESGGTVAVGTSDGCTSVLQL 480
>sp|Q16960|DYI3_HELCR Dynein intermediate chain 3, ciliary OS=Heliocidaris crassispina
PE=2 SV=1
Length = 597
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 140/331 (42%), Gaps = 17/331 (5%)
Query: 65 NRNVTYMDWSTQHPELLLASYH--RNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVL 122
R T++ W P+ L +Y ++ E IW+ + PEF SP++
Sbjct: 161 KRPATHLSWYPDGPKKLAVAYSSLEFQKTSAETSMDSYIWDIE-NPNKPEFVLKPVSPLV 219
Query: 123 SCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIGTQNAH 182
+ + ++++GG Y+GQ+ WDTR + V +P+ +H PV+ + ++
Sbjct: 220 CLEYNPKDVHVLIGGCYNGQVAFWDTR-KGSQAVEMSPVE-HSHHDPVYKTIWLQSKTGT 277
Query: 183 NLISISNDGRLCSWSLEMLSSPQET--RDLQYNNKQTKNLAVLSLAFPQNDVNNFVVGCE 240
S S DG++ W + L P E D K V+SL + F+VG E
Sbjct: 278 ECFSASTDGQVLWWDMRKLGEPTEKLIMDPSKKGKMENAQGVISLEYEPTIPTKFMVGTE 337
Query: 241 DGNVYSACRHGNKAGN--VECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWN 298
G + S R V Y+ H GPV L Q + F +LT DW+ ++W+
Sbjct: 338 QGTIISCNRKAKTPPEKIVAIYKEHIGPVYSL-----QRNPFFPKNFLTVG-DWTARIWS 391
Query: 299 IKENKPVHSFNEFR-DYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEG 357
+ ++ Y+ D WSP+ PA+F T ++ G +D+W+ + P S V
Sbjct: 392 EDIRDSSIMWTKYHMSYLTDGCWSPVRPAVFFTTKMDGSLDVWDYLFKQKDPTLSLQV-S 450
Query: 358 APALSRVTWTPNGTQLCVGDEKGAITMFDVG 388
AL + G + G G T+ ++
Sbjct: 451 DDALHSLRVQDQGRLIATGSNSGTTTLLELS 481
>sp|E9PYY5|WDR78_MOUSE WD repeat-containing protein 78 OS=Mus musculus GN=Wdr78 PE=2 SV=1
Length = 807
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 149/354 (42%), Gaps = 32/354 (9%)
Query: 63 SKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVL 122
+K NV+ + W+ +P+LL Y N + G+ W+ K PE + V
Sbjct: 442 TKGLNVSSLSWNKANPDLLAVGYG-NFGFREQKKGMACCWSIK-NPMWPERIYQSSYGVT 499
Query: 123 SCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVI------ 176
S F+ +P L+ G ++G + +++ + PV + S H PV+ + I
Sbjct: 500 SVDFSNSSPNLLAVGYHNGTVAIYNVQSSHNIPVLDSSESPQKHLGPVWQVQWIEQDRGT 559
Query: 177 -GTQNAHNLISISNDGRLCSW---------SLEMLSSPQETRDLQYNNKQTKNLAVLS-- 224
G L+SIS DGR+ W L L T + K+ K A++S
Sbjct: 560 TGDDKREILVSISADGRISKWIIRKGLDCHDLMRLKRTTATGGKKGGEKEKKGEALISRQ 619
Query: 225 -----LAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHI 279
AF D N ++ G E+G ++ C +E Y GH+GPV ++ +
Sbjct: 620 APGMCFAFHPKDTNIYLAGTEEGLIHK-CSCSYNEQYLETYRGHKGPV-----YKVTWNP 673
Query: 280 DFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDL 339
++L+ S DW V +W+ KP SF V DV WSP + +FA RV++
Sbjct: 674 FCPDVFLSCSADWGVMIWHQDTVKPFLSFYPTTYVVYDVSWSPKSAYIFAAAN-ENRVEI 732
Query: 340 WNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGEVGIA 393
W+L + T P + + V + L VGD G + ++++ + A
Sbjct: 733 WDLQISTLDPLIVNVANPGIKFTTVLFAKETDCLLVGDSDGQVAVYELRNMPTA 786
>sp|Q5VTH9|WDR78_HUMAN WD repeat-containing protein 78 OS=Homo sapiens GN=WDR78 PE=2 SV=1
Length = 848
Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 155/354 (43%), Gaps = 44/354 (12%)
Query: 63 SKNRNVTYMDWSTQHPELLLASYHRN--KEAPNEPDGVCLIWNTKFKKTTPEF-EFFCQS 119
+K NV+ + W+ +P+LL Y KE + G+ W+ K P + E QS
Sbjct: 483 TKGLNVSSLAWNKTNPDLLAVGYGHFGFKE---QKRGLACCWSIK----NPMWPERIYQS 535
Query: 120 P--VLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVI- 176
P V + F+ P L+ G ++G I +++ R PV + S H PV+ + I
Sbjct: 536 PYGVTAVDFSIGAPNLLAVGYHNGTIAIYNVRSNSNVPVLDSSESPQKHLGPVWQLQWIE 595
Query: 177 ------GTQNAHNLISISNDGRLCSW---------SLEMLSSPQETRDLQYNNKQTKNLA 221
G L+SIS DGR+ W L L + + K+ K+ A
Sbjct: 596 QDRGTTGDGKREILVSISADGRISKWVIRKGLDCYDLMRLKRTTAASNKKGGEKEKKDEA 655
Query: 222 VLS-------LAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHR 274
++S AF D N ++ G E+G+++ C ++ Y GH+GPV ++ +
Sbjct: 656 LISRQAPGMCFAFHPKDTNIYLAGTEEGHIHK-CSCSYNEQYLDTYRGHKGPVYKVTWN- 713
Query: 275 AQGHIDFSH-LYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEV 333
F H ++L+ S DW V +W + KP SF V DV WSP + +FA
Sbjct: 714 -----PFCHDVFLSCSADWGVIIWQQENVKPSLSFYPATSVVYDVAWSPKSSYIFAAAN- 767
Query: 334 AGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDV 387
RV++W+L++ T P + + + L VGD G ++++++
Sbjct: 768 ENRVEIWDLHISTLDPLIVNTANPGIKFTTILFAKQTDCLLVGDSDGQVSVYEL 821
>sp|Q16959|DYI2_HELCR Dynein intermediate chain 2, ciliary OS=Heliocidaris crassispina
PE=2 SV=1
Length = 702
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 175/377 (46%), Gaps = 44/377 (11%)
Query: 33 LPQDLQF--DMTGD--EKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRN 88
+ QD ++ DM+ + ++ T L + +D+ SK VT + W+ ++ +L A H +
Sbjct: 297 VSQDFKYYEDMSDEFRDQEGTLLPLWKFSYDK--SKRLAVTSVCWNPKYKDLF-AVAHGS 353
Query: 89 KEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDT 148
+ + G+ L + K + PEF + S V+ +PYLI G G + +++
Sbjct: 354 YDFMKQSRGMILFYTLK-NPSFPEFVYPTDSGVMCIDIRPEHPYLICVGYCDGSVGVFNV 412
Query: 149 RVQKKTPVHRTPLSVMAHTHPVFCMS--VIGTQNAHNLISISNDGRLCSWSL-------- 198
PV ++ HT PV+ ++ N N S+S+DGR+ +W+L
Sbjct: 413 TSTDANPVFQSTAKTGKHTDPVWQVAWQKDDLDNNLNFFSVSSDGRVVAWTLVKNELTYT 472
Query: 199 -----EMLSSPQETRDLQYNNKQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNK 253
++ S+PQ D + T F + F+VG E+G ++ C
Sbjct: 473 DVIQLQLDSAPQ---DGPEGTQLTPLGCGTCFDFHKQTDYLFLVGTEEGKIHK-CSKAYS 528
Query: 254 AGNVECYEGHEGPVVGLSSHRAQGHIDFSH----LYLTSSYDWSVKLWN-IKENKPVHSF 308
+ ++ +E H H A + ++H ++++ S DWSVK+W+ N P+ +F
Sbjct: 529 SQFLDTFEAH---------HMAVYKVMWNHFHPKIFISCSADWSVKIWDHTYRNGPMFTF 579
Query: 309 NEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVP--ATSAIVEGAPALSRVTW 366
+ V DV W+P + +FA V G+V +++LNL+ P + + + L+ +T+
Sbjct: 580 -DLGSAVGDVAWAPYSSTVFAAVTADGKVHVFDLNLNKYEPICEQAVVQKKKTKLTHITF 638
Query: 367 TPNGTQLCVGDEKGAIT 383
PN + VGD++G ++
Sbjct: 639 NPNFPIVLVGDDRGYVS 655
>sp|Q32KS2|DNAI1_BOVIN Dynein intermediate chain 1, axonemal OS=Bos taurus GN=DNAI1 PE=2
SV=1
Length = 702
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 160/342 (46%), Gaps = 27/342 (7%)
Query: 58 FDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC 117
F +K VT + W+ ++ +L A H + + + G+ L+++ K + PE+ F
Sbjct: 327 FQNDKAKRLAVTALCWNPKYNDLF-AVGHGSYDFMKQSRGMLLLYSMK-NPSFPEYIFSS 384
Query: 118 QSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIG 177
+S ++ +PYL++ G Y G + +++ + P R+ HT PV+ +
Sbjct: 385 ESGIMCLDMHVDHPYLVVVGHYDGNVAIYNLKKPHSQPSFRSSAKSGKHTDPVWQVRWQK 444
Query: 178 TQNAHNL--ISISNDGRLCSWSL---EMLSSPQETRDLQYNNKQTKNLAVLSL------- 225
HNL S+S+DGR+ SW+L E++ + + L+ T+ L L +
Sbjct: 445 DDMDHNLNFFSVSSDGRIVSWTLVKSELVHT--DVIKLKVEGSTTEGLEGLQIHTVGCGT 502
Query: 226 --AFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSH 283
F + F+VG E+G +Y C + ++ Y+ H V +S + +
Sbjct: 503 AFDFHREIDYLFLVGTEEGKIYK-CSKSYSSQFLDTYDAHNMAVDAVSWNPYH-----TK 556
Query: 284 LYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLN 343
++++ S DW+VK+W+ P+ + + V DV W+P + +FA V G+ +++L+
Sbjct: 557 VFMSCSSDWTVKIWDHTIKTPMFIY-DLNSAVGDVAWAPYSSTVFAAVTTNGKTHVFDLS 615
Query: 344 LDT--EVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAIT 383
++ + + + L+ V + P + VGD++G +T
Sbjct: 616 INKYEAICNQPVVAKKKNKLTHVQFNPIHPIIIVGDDRGHVT 657
>sp|Q4V8G4|WDR78_RAT WD repeat-containing protein 78 OS=Rattus norvegicus GN=Wdr78 PE=2
SV=1
Length = 803
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 150/351 (42%), Gaps = 38/351 (10%)
Query: 63 SKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEF-EFFCQSP- 120
+K NV+ + W+ + +LL Y N + G+ W+ K P + E QSP
Sbjct: 441 TKGLNVSSLSWNKANSDLLAVGYG-NFGFKEQKRGMACCWSIK----NPMWPERIYQSPY 495
Query: 121 -VLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVI--- 176
V S F+ +P L+ G ++G + +++ + TPV + S H PV+ + I
Sbjct: 496 GVTSVDFSISSPNLLAVGYHNGTVAIYNVQSNHNTPVLDSSESPQKHLGPVWQVQWIEQD 555
Query: 177 ----GTQNAHNLISISNDGRLCSW---------SLEMLSSPQETRDLQYNNKQTKNLAVL 223
G L+SIS DGR+ W L L T + K+ K A++
Sbjct: 556 RGTTGDDRREILVSISADGRISKWVIRKGLDCHDLMHLKRTTVTSSKKGIEKEKKGEALI 615
Query: 224 S-------LAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQ 276
S AF D N ++ G E+G ++ C +E Y GH+GPV ++
Sbjct: 616 SRQAPGMCFAFHTKDTNIYLAGTEEGLIHK-CSCSYNEQYLETYRGHKGPV-----YKVT 669
Query: 277 GHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGR 336
+ ++L+ S DW V +W+ KP +F V DV WSP + +FA R
Sbjct: 670 WNPFCPDVFLSCSADWGVMIWHQDNVKPFFTFYPTTYVVYDVAWSPKSAYIFAAAN-ENR 728
Query: 337 VDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDV 387
V++W+L + T P + + V + L VGD G + ++++
Sbjct: 729 VEIWDLQISTLDPLIVNVANPGIKFTTVLFAKQTDCLLVGDSDGQVAVYEL 779
>sp|Q5XIL8|DNAI1_RAT Dynein intermediate chain 1, axonemal OS=Rattus norvegicus GN=Dnai1
PE=2 SV=1
Length = 705
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 157/340 (46%), Gaps = 23/340 (6%)
Query: 58 FDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC 117
F +K VT + W+ ++ +L A H + + + G+ L+++ K + PE+ F
Sbjct: 330 FQNDKAKRLAVTALCWNPKYKDLF-AVGHGSYDFMKQSRGMLLLYSMK-NPSFPEYMFSS 387
Query: 118 QSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIG 177
+S ++ +PYL++ G Y G + +++ + P R+ HT PV+ +
Sbjct: 388 ESGIMCLDMHMDHPYLVVVGYYDGNVAIYNLKKPHSQPCFRSTSKSGKHTDPVWQVKWQK 447
Query: 178 TQNAHNL--ISISNDGRLCSWSL---EMLS-SPQETRDLQYNNKQTKNLAVLSLA----- 226
HNL S+S+DGR+ SW+L E++ + +D + + L + ++
Sbjct: 448 DDMDHNLNFFSVSSDGRIVSWTLVKSELVHIDVIKLKDEGSTTEIPEGLQLHTVGCGTAF 507
Query: 227 -FPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLY 285
F + F+VG E+G +Y C + ++ Y+ H V + + + +
Sbjct: 508 DFHKEIDYLFLVGTEEGKIYK-CSKSYSSQFLDTYDAHNMAVDAVLWNPYHARV-----F 561
Query: 286 LTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLD 345
++ S DW+VK+W+ P+ ++ V DV W+P + +FA V G+ +++L ++
Sbjct: 562 ISCSSDWTVKIWDHAIKTPMFIYD-LNAAVGDVAWAPYSSTVFAAVTTDGKAHVFDLAVN 620
Query: 346 T--EVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAIT 383
+ + + ++ V + P + VGD++G IT
Sbjct: 621 KYEAICNQPVVAKKKNKITHVQFNPIHPIIIVGDDRGHIT 660
>sp|Q8C0M8|DNAI1_MOUSE Dynein intermediate chain 1, axonemal OS=Mus musculus GN=Dnai1 PE=2
SV=1
Length = 701
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 155/341 (45%), Gaps = 27/341 (7%)
Query: 58 FDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC 117
F +K VT + W+ ++ +L A H + + + G+ L+++ K + PE+ F
Sbjct: 326 FQNDKAKRLAVTALCWNPKYKDLF-AVGHGSYDFMKQSRGMLLLYSMK-NPSFPEYMFSS 383
Query: 118 QSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIG 177
+S ++ +PYL++ G Y G + +++ + P R+ HT PV+ +
Sbjct: 384 ESGIMCLDVHVDHPYLVVVGYYDGNVAIYNLKKPHSQPCFRSTSKSGKHTDPVWQVKWQK 443
Query: 178 TQNAHNL--ISISNDGRLCSWSL---EMLSSPQETRDLQYNNKQTKNLAVLSL------- 225
HNL S+S+DGR+ SW+L E++ + L+ T+ L L
Sbjct: 444 DDMDHNLNFFSVSSDGRIVSWTLVKSELVHI--DIIKLKTEGSTTEIPEGLQLHTVGCGT 501
Query: 226 --AFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSH 283
F + F+VG E+G +Y C + ++ Y+ H V + + +
Sbjct: 502 AFDFHKEIDYMFLVGTEEGKIYK-CSKSYSSQFLDTYDAHNMAVDAVLWNPYH-----TK 555
Query: 284 LYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLN 343
++++ S DW+VK+W+ P+ ++ V DV W+P + +FA V G+ +++L
Sbjct: 556 VFMSCSSDWTVKIWDHTIKTPMFIYD-LNSAVGDVAWAPYSSTVFAAVTTDGKAHVFDLA 614
Query: 344 LDT--EVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAI 382
++ + + + ++ V + P + VGD++G I
Sbjct: 615 VNKYEAICNQPVVAKKKNKITHVQFNPIHPIIIVGDDRGHI 655
>sp|Q5U4F6|WDR34_MOUSE WD repeat-containing protein 34 OS=Mus musculus GN=Wdr34 PE=2 SV=2
Length = 535
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 135/304 (44%), Gaps = 44/304 (14%)
Query: 119 SPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVF-CMSVIG 177
S V+ F P I GG YSG++++WD + + RT L+ HT PV+ + +
Sbjct: 217 SAVMCLAFHPTQPSHIAGGLYSGEVLVWDMSRPEDPLLWRTGLTDDTHTDPVYQVLWLPE 276
Query: 178 TQNAHN--LISISNDGRLCSW--------------SLEMLSSPQETRDLQYNNKQTKNLA 221
+++H ++S + DG++ W +L + P+ T+ L+ + +
Sbjct: 277 PRHSHRFQVLSAATDGKVLLWRGSGAGQLRLTKGFALAVQQLPRSTK-LKKPPRGETEVG 335
Query: 222 VLSLAFPQNDVNNFVVGCEDG---------NVYSACRHGN----KAGNVECYEGHEGPVV 268
V S+AF D + FV+G E G V + R + +A + H GPV
Sbjct: 336 VTSVAFSSFDSSLFVLGTEGGFPLKCSLASEVAALTRMPSSVPLRAPVQFTFSPHGGPVY 395
Query: 269 GLSS---HRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINP 325
+S HR +L+L++ D V L+++ + +P+ S Y+ V+WSP+ P
Sbjct: 396 SVSCSPFHR--------NLFLSAGTDGHVHLYSMLQAQPLTSLQLSHKYLFAVRWSPVRP 447
Query: 326 ALFATVEVAGRVDLWNLNLDTEVPATS--AIVEGAPALSRVTWTPNGTQLCVGDEKGAIT 383
+FA G V L++L ++ P S +G+P + L GD KG +
Sbjct: 448 LVFAAASGEGDVQLFDLQKSSQKPTVSITQTQDGSPVYCLEFNSQQTQLLAAGDAKGMVK 507
Query: 384 MFDV 387
++ +
Sbjct: 508 VWQL 511
>sp|Q9UI46|DNAI1_HUMAN Dynein intermediate chain 1, axonemal OS=Homo sapiens GN=DNAI1 PE=1
SV=1
Length = 699
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 147/338 (43%), Gaps = 22/338 (6%)
Query: 58 FDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFC 117
F +K +VT + W+ ++ +L Y + + + G+ L+++ K + PE+ F
Sbjct: 325 FQNDKAKRLSVTALCWNPKYRDLFAVGYG-SYDFMKQSRGMLLLYSLK-NPSFPEYMFSS 382
Query: 118 QSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIG 177
S V+ +PYL+ G Y G + +++ + P + H+ PV+ +
Sbjct: 383 NSGVMCLDIHVDHPYLVAVGHYDGNVAIYNLKKPHSQPSFCSSAKSGKHSDPVWQVKWQK 442
Query: 178 TQNAHNL--ISISNDGRLCSWSLEMLSSPQ-ETRDLQYNNKQTKNLAVLSL--------- 225
NL S+S+DGR+ SW+L + L+ T+ L L
Sbjct: 443 DDMDQNLNFFSVSSDGRIVSWTLVKRKLVHIDVIKLKVEGSTTEVPEGLQLHPVGCGTAF 502
Query: 226 AFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLY 285
F + F+VG E+G +Y C + ++ Y+ H V +S + + ++
Sbjct: 503 DFHKEIDYMFLVGTEEGKIYK-CSKSYSSQFLDTYDAHNMSVDTVSWNPYH-----TKVF 556
Query: 286 LTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLD 345
++ S DW+VK+W+ P+ + + V DV W+P + +FA V G+ +++L ++
Sbjct: 557 MSCSSDWTVKIWDHTIKTPMFIY-DLNSAVGDVAWAPYSSTVFAAVTTDGKAHIFDLAIN 615
Query: 346 T-EVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAI 382
E + L+ V + + VGD++G I
Sbjct: 616 KYEAICNQPVAAKKNRLTHVQFNLIHPIIIVGDDRGHI 653
>sp|Q96EX3|WDR34_HUMAN WD repeat-containing protein 34 OS=Homo sapiens GN=WDR34 PE=1 SV=2
Length = 536
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 123/311 (39%), Gaps = 58/311 (18%)
Query: 72 DWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFNP 131
DWST + + R P +P V + S VL F P
Sbjct: 187 DWSTLKSFVCAWNLDRRDLRPQQPSAVVEV----------------PSAVLCLAFHPTQP 230
Query: 132 YLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPV---FCMSVIGTQNAHNLISIS 188
+ GG YSG++++WD + + RT L+ HT PV + G + ++S++
Sbjct: 231 SHVAGGLYSGEVLVWDLSRLEDPLLWRTGLTDDTHTDPVSQVVWLPEPGHSHRFQVLSVA 290
Query: 189 NDGRLCSW--------------SLEMLSSPQETRDLQYNNKQTKNLAVLSLAFPQNDVNN 234
DG++ W +L M P+ T+ L+ + + + ++AF D
Sbjct: 291 TDGKVLLWQGIGVGQLQLTEGFALVMQQLPRSTK-LKKHPRGETEVGATAVAFSSFDPRL 349
Query: 235 FVVGCEDGNVYSACRHGNKAGNVE-------------CYEGHEGPVVGLSS---HRAQGH 278
F++G E G +A + H GP+ +S HR
Sbjct: 350 FILGTEGGFPLKCSLAAGEAALTRMPSSVPLRAPAQFTFSPHGGPIYSVSCSPFHR---- 405
Query: 279 IDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVD 338
+L+L++ D V L+++ + P+ S Y+ V+WSP+ P +FA G V
Sbjct: 406 ----NLFLSAGTDGHVHLYSMLQAPPLTSLQLSLKYLFAVRWSPVRPLVFAAASGKGDVQ 461
Query: 339 LWNLNLDTEVP 349
L++L ++ P
Sbjct: 462 LFDLQKSSQKP 472
>sp|Q39578|DYI2_CHLRE Dynein, 78 kDa intermediate chain, flagellar outer arm
OS=Chlamydomonas reinhardtii GN=ODA9 PE=1 SV=3
Length = 683
Score = 78.6 bits (192), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 152/345 (44%), Gaps = 27/345 (7%)
Query: 56 QFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEF 115
+F +K SK R VT + W+ + ++ Y + E + G+ I++ K + PE+ F
Sbjct: 301 RFVSDK-SKRRQVTSVCWNPLYDDMFAVGYG-SYEFLKQASGLINIYSLK-NPSHPEYTF 357
Query: 116 FCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCM-- 173
+S V+ F L+ G Y G ++++D R++K P+++ + PV+ +
Sbjct: 358 HTESGVMCVHFHPEFANLLAVGCYDGSVLVYDVRLKKDEPIYQASVRTGKLNDPVWQIYW 417
Query: 174 SVIGTQNAHNLISISNDGRLCSWSL-------EMLSSPQETRDLQYNNKQTKNLA----- 221
Q + +SIS+DG + W+L E L + R + ++ N +
Sbjct: 418 QPDDAQKSLQFVSISSDGAVNLWTLTKSELIPECLMKLRVVRAGETREEEDPNASGAAGG 477
Query: 222 -VLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHID 280
+ + ++VG E+G ++ C + + Y H V + H H
Sbjct: 478 CCMDFCKMPGQESIYLVGTEEGAIHR-CSKAYSSQYLSTYVSHHLAVYAV--HWNNIH-- 532
Query: 281 FSHLYLTSSYDWSVKLWNI--KENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVD 338
++L++S + + + V +F+ D + DV W+ + P +FA V GRV
Sbjct: 533 -PSMFLSASCRLDHQAVGLCHDPKRAVMNFD-LNDSIGDVSWAALQPTVFAAVTDDGRVH 590
Query: 339 LWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAIT 383
+++L + +P S V L+++ + P + VGD+KG +T
Sbjct: 591 VFDLAQNKLLPLCSQKVVKKAKLTKLVFNPKHPIVLVGDDKGCVT 635
>sp|Q8C761|WDR60_MOUSE WD repeat-containing protein 60 OS=Mus musculus GN=Wdr60 PE=2 SV=1
Length = 999
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 120/312 (38%), Gaps = 77/312 (24%)
Query: 101 IWNTKFKKTTPEFEFFCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKK------- 153
+W+ ++ + P+ C+S V CCF+ +L+ GT G +V+WD R +
Sbjct: 623 VWDI-WQPSGPQKVLICESKVTCCCFSPLKAFLLFAGTVHGSVVVWDLREDSRIHHYVRL 681
Query: 154 --------TPV-----------HRTPLSVM------AHTHPVFCMSVIGTQN-----AHN 183
TP HR+PL + A+ F +S TQ + +
Sbjct: 682 SNCFWAFRTPTFSTDGILTSVNHRSPLQAIEPVATSAYKKQSFVLSPFSTQEEMAGLSFH 741
Query: 184 LISISNDGRLCSWSLEMLSSP-------------------------QETRDLQYNNKQT- 217
+ S+ G L W + L Q L + + +
Sbjct: 742 IASLDETGVLNVWVVVELPKADISGSMSDLGLIPGGRIKLVHSTVIQLGNSLSHKDSELW 801
Query: 218 KNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAG-NVECYEGHEGPVVGLSSHRAQ 276
+ LS+ F +D N+FVVG + G + + R + V E H + ++
Sbjct: 802 GSTQTLSVKFLPSDPNHFVVGTDMGLISHSTRQDWRVSPRVFKPEQHGVRPIKVNV---- 857
Query: 277 GHIDFS----HLYLTSSYDWSVKLWNIKENKPVHSFNEFRD--YVMDVQWSPINPALFAT 330
IDFS ++L D S++L + +P+ ++ V +QWSP PA+F
Sbjct: 858 --IDFSPFEETVFLAGCSDGSIRLHQLTSERPIMQWDNSTSGHAVTSLQWSPTRPAVFLV 915
Query: 331 VEVAGRVDLWNL 342
+ A R+ +W+L
Sbjct: 916 QDDASRIYVWDL 927
>sp|P0CS36|HAT2_CRYNJ Histone acetyltransferase type B subunit 2 OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=HAT2 PE=3 SV=1
Length = 435
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 130 NPYLILGGTYSGQIVLWD-TRVQKKTPVH---RTPLSVMAHTHPVFCMSVIGTQNAHNLI 185
NP LI T +G++ ++D T+ + K P + + + + T + +S + H ++
Sbjct: 149 NPELIATKTVTGEVYVFDRTKHESKAPANGECKPDIRLKGQTKEGYGLSWNALKEGH-IL 207
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLSLA--FPQNDVNNFVVGCEDGN 243
S S D + W ++ S ++ LQ T + A ++ P+N+ N F +DG
Sbjct: 208 SASEDTTIGHWDIQGYS--KQDPSLQPLRLYTGHSAYVADVEWHPKNE-NMFGSVSDDGQ 264
Query: 244 VYS-ACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKE- 301
+ R N A +GH + +S + +L+LT S D ++ LW++++
Sbjct: 265 IMIWDTRSDNTAKASSQVQGHNAEINCISFAPSS-----EYLFLTGSSDNTIALWDLRKL 319
Query: 302 NKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLN 343
+ HSF + V+ + WSP +P FA+ RV +W+L+
Sbjct: 320 STKHHSFEAHTNDVLQLSWSPTSPVHFASASADRRVHIWDLD 361
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 90/212 (42%), Gaps = 24/212 (11%)
Query: 202 SSPQETRDLQ-YNNKQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKA-GNVEC 259
+SP R +Q N+ N A P+ V G + V+ +H +KA N EC
Sbjct: 123 ASPARIRAIQTINHAGEVNRARYMPQNPELIATKTVTG--EVYVFDRTKHESKAPANGEC 180
Query: 260 -----YEGHEGPVVGLS-SHRAQGHIDFSHLYLTSSYDWSVKLWNIK-------ENKPVH 306
+G GLS + +GHI L++S D ++ W+I+ +P+
Sbjct: 181 KPDIRLKGQTKEGYGLSWNALKEGHI------LSASEDTTIGHWDIQGYSKQDPSLQPLR 234
Query: 307 SFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTW 366
+ YV DV+W P N +F +V G++ +W+ D A+S + ++ +++
Sbjct: 235 LYTGHSAYVADVEWHPKNENMFGSVSDDGQIMIWDTRSDNTAKASSQVQGHNAEINCISF 294
Query: 367 TPNGTQL-CVGDEKGAITMFDVGEVGIACLKF 397
P+ L G I ++D+ ++ F
Sbjct: 295 APSSEYLFLTGSSDNTIALWDLRKLSTKHHSF 326
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Query: 96 DGVCLIWNTKFKKTT-PEFEFFCQSPVLSC-CFAKFNPYLILGGTYSGQIVLWDTRVQKK 153
DG +IW+T+ T + + ++C FA + YL L G+ I LWD R K
Sbjct: 262 DGQIMIWDTRSDNTAKASSQVQGHNAEINCISFAPSSEYLFLTGSSDNTIALWDLR--KL 319
Query: 154 TPVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQ 211
+ H S AHT+ V +S T H S S D R+ W L+ + + Q D +
Sbjct: 320 STKHH---SFEAHTNDVLQLSWSPTSPVH-FASASADRRVHIWDLDAIGAEQTPDDAE 373
>sp|P0CS37|HAT2_CRYNB Histone acetyltransferase type B subunit 2 OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=HAT2 PE=3 SV=1
Length = 435
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 130 NPYLILGGTYSGQIVLWD-TRVQKKTPVH---RTPLSVMAHTHPVFCMSVIGTQNAHNLI 185
NP LI T +G++ ++D T+ + K P + + + + T + +S + H ++
Sbjct: 149 NPELIATKTVTGEVYVFDRTKHESKAPANGECKPDIRLKGQTKEGYGLSWNALKEGH-IL 207
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLSLA--FPQNDVNNFVVGCEDGN 243
S S D + W ++ S ++ LQ T + A ++ P+N+ N F +DG
Sbjct: 208 SASEDTTIGHWDIQGYS--KQDPSLQPLRLYTGHSAYVADVEWHPKNE-NMFGSVSDDGQ 264
Query: 244 VYS-ACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKE- 301
+ R N A +GH + +S + +L+LT S D ++ LW++++
Sbjct: 265 IMIWDTRSDNTAKASSQVQGHNAEINCISFAPSS-----EYLFLTGSSDNTIALWDLRKL 319
Query: 302 NKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLN 343
+ HSF + V+ + WSP +P FA+ RV +W+L+
Sbjct: 320 STKHHSFEAHTNDVLQLSWSPTSPVHFASASADRRVHIWDLD 361
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 90/212 (42%), Gaps = 24/212 (11%)
Query: 202 SSPQETRDLQ-YNNKQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKA-GNVEC 259
+SP R +Q N+ N A P+ V G + V+ +H +KA N EC
Sbjct: 123 ASPARIRAIQTINHAGEVNRARYMPQNPELIATKTVTG--EVYVFDRTKHESKAPANGEC 180
Query: 260 -----YEGHEGPVVGLS-SHRAQGHIDFSHLYLTSSYDWSVKLWNIK-------ENKPVH 306
+G GLS + +GHI L++S D ++ W+I+ +P+
Sbjct: 181 KPDIRLKGQTKEGYGLSWNALKEGHI------LSASEDTTIGHWDIQGYSKQDPSLQPLR 234
Query: 307 SFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTW 366
+ YV DV+W P N +F +V G++ +W+ D A+S + ++ +++
Sbjct: 235 LYTGHSAYVADVEWHPKNENMFGSVSDDGQIMIWDTRSDNTAKASSQVQGHNAEINCISF 294
Query: 367 TPNGTQL-CVGDEKGAITMFDVGEVGIACLKF 397
P+ L G I ++D+ ++ F
Sbjct: 295 APSSEYLFLTGSSDNTIALWDLRKLSTKHHSF 326
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Query: 96 DGVCLIWNTKFKKTT-PEFEFFCQSPVLSC-CFAKFNPYLILGGTYSGQIVLWDTRVQKK 153
DG +IW+T+ T + + ++C FA + YL L G+ I LWD R K
Sbjct: 262 DGQIMIWDTRSDNTAKASSQVQGHNAEINCISFAPSSEYLFLTGSSDNTIALWDLR--KL 319
Query: 154 TPVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQ 211
+ H S AHT+ V +S T H S S D R+ W L+ + + Q D +
Sbjct: 320 STKHH---SFEAHTNDVLQLSWSPTSPVH-FASASADRRVHIWDLDAIGAEQTPDDAE 373
>sp|Q24572|CAF1_DROME Probable histone-binding protein Caf1 OS=Drosophila melanogaster
GN=Caf1 PE=1 SV=1
Length = 430
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 23/201 (11%)
Query: 184 LISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDG 242
L+S S+D +C W + ++P+E R + N T + AV+ +A+ + F +D
Sbjct: 197 LLSASDDHTICLWDIN--ATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQ 254
Query: 243 NVYS-ACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYL-TSSYDWSVKLWNIK 300
+ R+ N + + H V LS + +S L T S D +V LW+++
Sbjct: 255 KLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNP------YSEFILATGSADKTVALWDLR 308
Query: 301 ENK-PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAP 359
K +HSF +D + VQWSP N + A+ R+ +W+L+ E +T +G P
Sbjct: 309 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 368
Query: 360 AL-----------SRVTWTPN 369
L S +W PN
Sbjct: 369 ELLFIHGGHTAKISDFSWNPN 389
>sp|Q9I8G9|RBBP7_CHICK Histone-binding protein RBBP7 OS=Gallus gallus GN=RBBP7 PE=1 SV=1
Length = 424
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 119/313 (38%), Gaps = 51/313 (16%)
Query: 108 KTTPEFEFFCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTP------- 160
K E + + V + NPY+I T S ++++D K P P
Sbjct: 112 KIETEIKINHEGEVNRARYMPQNPYIIATKTPSADVLVFD---YTKHPSKPDPSGECNPD 168
Query: 161 LSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNL 220
L + H + +S H L+S S+D +C W + + P+E + + T +
Sbjct: 169 LRLRGHQKEGYGLSWNSNLKGH-LLSASDDHTVCLWDIS--AGPKEGKIVDAKAIFTGHS 225
Query: 221 AVL----------SLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGL 270
AV+ SL D ++ N S H + H V L
Sbjct: 226 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSH--------SVDAHTAEVNCL 277
Query: 271 SSHRAQGHIDFSHLYL-TSSYDWSVKLWNIKENK-PVHSFNEFRDYVMDVQWSPINPALF 328
S + +S L T S D +V LW+++ K +HSF +D + V WSP N +
Sbjct: 278 SFNP------YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETIL 331
Query: 329 ATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL-----------SRVTWTPNGT-QLCVG 376
A+ R+++W+L+ E + +G P L S +W PN +C
Sbjct: 332 ASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 391
Query: 377 DEKGAITMFDVGE 389
E + ++ + E
Sbjct: 392 SEDNIMQIWQMAE 404
>sp|Q60972|RBBP4_MOUSE Histone-binding protein RBBP4 OS=Mus musculus GN=Rbbp4 PE=1 SV=5
Length = 425
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 113/285 (39%), Gaps = 36/285 (12%)
Query: 108 KTTPEFEFFCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTP------- 160
K E + + V + NP +I T S ++++D K P P
Sbjct: 114 KIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFD---YTKHPSKPDPSGECNPD 170
Query: 161 LSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNL 220
L + H + +S + H L+S S+D +C W + + P+E + + T +
Sbjct: 171 LRLRGHQKEGYGLSWNPNLSGH-LLSASDDHTICLWDISAV--PKEGKVVDAKTIFTGHT 227
Query: 221 AVL---SLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQG 277
AV+ S + V + ++ R N + + H V LS +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWD-TRSNNTSKPSHSVDAHTAEVNCLSFNP--- 283
Query: 278 HIDFSHLYL-TSSYDWSVKLWNIKENK-PVHSFNEFRDYVMDVQWSPINPALFATVEVAG 335
+S L T S D +V LW+++ K +HSF +D + VQWSP N + A+
Sbjct: 284 ---YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 340
Query: 336 RVDLWNLNLDTEVPATSAIVEGAPAL-----------SRVTWTPN 369
R+++W+L+ E + +G P L S +W PN
Sbjct: 341 RLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPN 385
>sp|Q09028|RBBP4_HUMAN Histone-binding protein RBBP4 OS=Homo sapiens GN=RBBP4 PE=1 SV=3
Length = 425
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 113/285 (39%), Gaps = 36/285 (12%)
Query: 108 KTTPEFEFFCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTP------- 160
K E + + V + NP +I T S ++++D K P P
Sbjct: 114 KIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFD---YTKHPSKPDPSGECNPD 170
Query: 161 LSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNL 220
L + H + +S + H L+S S+D +C W + + P+E + + T +
Sbjct: 171 LRLRGHQKEGYGLSWNPNLSGH-LLSASDDHTICLWDISAV--PKEGKVVDAKTIFTGHT 227
Query: 221 AVL---SLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQG 277
AV+ S + V + ++ R N + + H V LS +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWD-TRSNNTSKPSHSVDAHTAEVNCLSFNP--- 283
Query: 278 HIDFSHLYL-TSSYDWSVKLWNIKENK-PVHSFNEFRDYVMDVQWSPINPALFATVEVAG 335
+S L T S D +V LW+++ K +HSF +D + VQWSP N + A+
Sbjct: 284 ---YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 340
Query: 336 RVDLWNLNLDTEVPATSAIVEGAPAL-----------SRVTWTPN 369
R+++W+L+ E + +G P L S +W PN
Sbjct: 341 RLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPN 385
>sp|Q3MHL3|RBBP4_BOVIN Histone-binding protein RBBP4 OS=Bos taurus GN=RBBP4 PE=1 SV=3
Length = 425
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 113/285 (39%), Gaps = 36/285 (12%)
Query: 108 KTTPEFEFFCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTP------- 160
K E + + V + NP +I T S ++++D K P P
Sbjct: 114 KIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFD---YTKHPSKPDPSGECNPD 170
Query: 161 LSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNL 220
L + H + +S + H L+S S+D +C W + + P+E + + T +
Sbjct: 171 LRLRGHQKEGYGLSWNPNLSGH-LLSASDDHTICLWDISAV--PKEGKVVDAKTIFTGHT 227
Query: 221 AVL---SLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQG 277
AV+ S + V + ++ R N + + H V LS +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWD-TRSNNTSKPSHSVDAHTAEVNCLSFNP--- 283
Query: 278 HIDFSHLYL-TSSYDWSVKLWNIKENK-PVHSFNEFRDYVMDVQWSPINPALFATVEVAG 335
+S L T S D +V LW+++ K +HSF +D + VQWSP N + A+
Sbjct: 284 ---YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 340
Query: 336 RVDLWNLNLDTEVPATSAIVEGAPAL-----------SRVTWTPN 369
R+++W+L+ E + +G P L S +W PN
Sbjct: 341 RLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPN 385
>sp|Q9W7I5|RBBP4_CHICK Histone-binding protein RBBP4 OS=Gallus gallus GN=RBBP4 PE=1 SV=3
Length = 425
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 113/285 (39%), Gaps = 36/285 (12%)
Query: 108 KTTPEFEFFCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTP------- 160
K E + + V + NP +I T S ++++D K P P
Sbjct: 114 KIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFD---YTKHPSKPDPSGECNPD 170
Query: 161 LSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNL 220
L + H + +S + H L+S S+D +C W + + P+E + + T +
Sbjct: 171 LRLRGHQKEGYGLSWNPNLSGH-LLSASDDHTICLWDISAV--PKEGKVVDAKTIFTGHT 227
Query: 221 AVL---SLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQG 277
AV+ S + V + ++ R N + + H V LS +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWD-TRSNNTSKPSHSVDAHTAEVNCLSFNP--- 283
Query: 278 HIDFSHLYL-TSSYDWSVKLWNIKENK-PVHSFNEFRDYVMDVQWSPINPALFATVEVAG 335
+S L T S D +V LW+++ K +HSF +D + VQWSP N + A+
Sbjct: 284 ---YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 340
Query: 336 RVDLWNLNLDTEVPATSAIVEGAPAL-----------SRVTWTPN 369
R+++W+L+ E + +G P L S +W PN
Sbjct: 341 RLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPN 385
>sp|Q5RF92|RBBP4_PONAB Histone-binding protein RBBP4 OS=Pongo abelii GN=RBBP4 PE=2 SV=3
Length = 425
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 113/285 (39%), Gaps = 36/285 (12%)
Query: 108 KTTPEFEFFCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTP------- 160
K E + + V + NP +I T S ++++D K P P
Sbjct: 114 KIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFD---YTKHPSKPDPSGECNPD 170
Query: 161 LSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNL 220
L + H + +S + H L+S S+D +C W + + P+E + + T +
Sbjct: 171 LRLRGHQKEGYGLSWNPNLSGH-LLSASDDHTICLWDISAV--PKEGKVVDAKTIFTGHT 227
Query: 221 AVL---SLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQG 277
AV+ S + V + ++ R N + + H V LS +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWD-TRSNNTSKPSHSVDAHTAEVNCLSFNP--- 283
Query: 278 HIDFSHLYL-TSSYDWSVKLWNIKENK-PVHSFNEFRDYVMDVQWSPINPALFATVEVAG 335
+S L T S D +V LW+++ K +HSF +D + VQWSP N + A+
Sbjct: 284 ---YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 340
Query: 336 RVDLWNLNLDTEVPATSAIVEGAPAL-----------SRVTWTPN 369
R+++W+L+ E + +G P L S +W PN
Sbjct: 341 RLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPN 385
>sp|Q7ZTY4|RBBP7_DANRE Histone-binding protein RBBP7 OS=Danio rerio GN=rbbp7 PE=2 SV=1
Length = 426
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 25/203 (12%)
Query: 183 NLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVL---SLAFPQNDVNNFVVGC 239
NL+S S+D +C W + +P+E + + T + AV+ S + V
Sbjct: 192 NLLSASDDHTICLWDIS--GAPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADD 249
Query: 240 EDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYL-TSSYDWSVKLWN 298
+ ++ R N + + H V LS + +S L T S D +V LW+
Sbjct: 250 QKLMIWD-TRSNNTSKPSHSVDAHTAEVNCLSFNP------YSEFILATGSADKTVALWD 302
Query: 299 IKENK-PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEG 357
++ K +HSF +D + VQWSP N + A+ R+++W+L+ E + +G
Sbjct: 303 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDG 362
Query: 358 APAL-----------SRVTWTPN 369
P L S +W PN
Sbjct: 363 PPELLFIHGGHTAKISDFSWNPN 385
>sp|Q6P1W0|DTL_XENTR Denticleless protein homolog OS=Xenopus tropicalis GN=dtl PE=1 SV=1
Length = 713
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 94/271 (34%), Gaps = 37/271 (13%)
Query: 118 QSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHR---------------TPLS 162
Q + S F+KF + G G I++WDTR KK +R TP
Sbjct: 140 QCSLKSVAFSKFEKAVFSTGGRDGNIMVWDTRCNKKDGFYRQVNQITGAHNALDKQTPSK 199
Query: 163 VMAHTHPVF----------CMSVIGTQNAHNLISI-SNDGRLCSWSLEMLSS-----PQE 206
V V ++V+ Q+ H +IS + DG + W L S P
Sbjct: 200 VKKRKPYVRGLAPSVDSQQSVTVVIFQDEHTIISAGAVDGIVKVWDLRKNYSAYRQDPVP 259
Query: 207 TRDLQYNNKQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGP 266
+ Y T+ L +L N F C D NVY G K V + GH+
Sbjct: 260 AKLFPYPGNSTRKLGYSNLVLDPTGTNLFA-SCTDDNVYMFNATGLKTEPVSVFGGHQNS 318
Query: 267 VVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK-PVHSFNEFRDYVMDVQWSPINP 325
+ + + L+ S D S +W + + K P + V V W +
Sbjct: 319 TFYIKTSVSPD----GQFLLSGSSDHSAYIWQVSDPKVPPVTLTGHCQEVTSVAWCQSDF 374
Query: 326 ALFATVEVAGRVDLWNLNLDTEVPATSAIVE 356
AT V +W L +E A S E
Sbjct: 375 TKIATCSDDNTVRVWRLKRSSEDSAQSDKTE 405
>sp|O93377|RBP4A_XENLA Histone-binding protein RBBP4-A OS=Xenopus laevis GN=rbbp4-a PE=1
SV=3
Length = 425
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 25/203 (12%)
Query: 183 NLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVL---SLAFPQNDVNNFVVGC 239
NL+S S+D +C W + + P+E + + T + AV+ S + V
Sbjct: 192 NLLSASDDHTICLWDISAV--PKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADD 249
Query: 240 EDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYL-TSSYDWSVKLWN 298
+ ++ R N + + H V LS + +S L T S D +V LW+
Sbjct: 250 QKLMIWD-TRSNNTSKPSHSVDAHTAEVNCLSFNP------YSEFILATGSADKTVALWD 302
Query: 299 IKENK-PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEG 357
++ K +HSF +D + VQWSP N + A+ R+++W+L+ E + +G
Sbjct: 303 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG 362
Query: 358 APAL-----------SRVTWTPN 369
P L S +W PN
Sbjct: 363 PPELLFIHGGHTAKISDFSWNPN 385
>sp|Q6INH0|RBP4B_XENLA Histone-binding protein RBBP4-B OS=Xenopus laevis GN=rbbp4-b PE=1
SV=3
Length = 425
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 25/203 (12%)
Query: 183 NLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVL---SLAFPQNDVNNFVVGC 239
NL+S S+D +C W + + P+E + + T + AV+ S + V
Sbjct: 192 NLLSASDDHTICLWDISAV--PKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADD 249
Query: 240 EDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYL-TSSYDWSVKLWN 298
+ ++ R N + + H V LS + +S L T S D +V LW+
Sbjct: 250 QKLMIWD-TRSNNTSKPSHSVDAHTAEVNCLSFNP------YSEFILATGSADKTVALWD 302
Query: 299 IKENK-PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEG 357
++ K +HSF +D + VQWSP N + A+ R+++W+L+ E + +G
Sbjct: 303 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG 362
Query: 358 APAL-----------SRVTWTPN 369
P L S +W PN
Sbjct: 363 PPELLFIHGGHTAKISDFSWNPN 385
>sp|Q5M7K4|RBBP4_XENTR Histone-binding protein RBBP4 OS=Xenopus tropicalis GN=rbbp4 PE=2
SV=3
Length = 425
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 25/203 (12%)
Query: 183 NLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVL---SLAFPQNDVNNFVVGC 239
NL+S S+D +C W + + P+E + + T + AV+ S + V
Sbjct: 192 NLLSASDDHTICLWDISAV--PKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADD 249
Query: 240 EDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYL-TSSYDWSVKLWN 298
+ ++ R N + + H V LS + +S L T S D +V LW+
Sbjct: 250 QKLMIWD-TRSNNTSKPSHSVDAHTAEVNCLSFNP------YSEFILATGSADKTVALWD 302
Query: 299 IKENK-PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEG 357
++ K +HSF +D + VQWSP N + A+ R+++W+L+ E + +G
Sbjct: 303 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG 362
Query: 358 APAL-----------SRVTWTPN 369
P L S +W PN
Sbjct: 363 PPELLFIHGGHTAKISDFSWNPN 385
>sp|Q54SD4|RBBD_DICDI Probable histone-binding protein rbbD OS=Dictyostelium discoideum
GN=rbbD PE=3 SV=1
Length = 423
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 103/260 (39%), Gaps = 32/260 (12%)
Query: 130 NPYLILGGTYSGQIVLWDTRVQKKTPVHRTP-------LSVMAHTHPVFCMSVIGTQNAH 182
N +I T S ++ ++DT K P+ TP L + H + +S + H
Sbjct: 133 NHSIIATKTVSSEVYIFDT---TKHPLEPTPDGKCSPNLKLTGHKKEGYGISWNPRKEGH 189
Query: 183 NLISISNDGRLCSWSLEMLSSPQETRD-LQYNNKQTKNLAVLSLAFPQNDVNNFVVGCED 241
L+S S+D +C W + S T D L N T + ++ + D VG +
Sbjct: 190 -LLSCSDDQSICMWDISAASKSDSTLDALNIYNGHTSIVEDVAWHYIH-DTFFGSVGDDK 247
Query: 242 GNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKE 301
+ R G K + E H V LS +F L T S D +V LW+++
Sbjct: 248 KLMIWDTRTGTKP--IHVVEAHNSEVNCLS---FNPFCEF--LVATGSTDKTVALWDMRN 300
Query: 302 -NKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPA 360
+HS D V VQ+SP N + A+ RV++W+L+ E +G P
Sbjct: 301 LGNRLHSLISHTDEVFQVQFSPHNETVLASCGSDRRVNVWDLSRIGEEQNNEDAADGPPE 360
Query: 361 L-----------SRVTWTPN 369
L S +W PN
Sbjct: 361 LLFIHGGHTSKISDFSWNPN 380
>sp|Q6GPU3|DTLB_XENLA Denticleless protein homolog B OS=Xenopus laevis GN=dtl-b PE=2 SV=1
Length = 711
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 94/263 (35%), Gaps = 39/263 (14%)
Query: 118 QSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHR---------------TPLS 162
Q + S F+KF + G G I++WDTR KK +R TP
Sbjct: 140 QCSLKSVAFSKFERAVFSTGGRDGNIMVWDTRCNKKDGFYRQVNQITGAHNAIDKQTPSK 199
Query: 163 VMAHTHPVF----------CMSVIGTQNAHNLISI-SNDGRLCSWSLEMLSS-----PQE 206
V + ++V+ Q+ + +IS + DG + W L S P
Sbjct: 200 VKKRKPSIRGLAPSVDSQQSVTVVIFQDEYTVISAGAVDGVVKIWDLRKNYSTYRQDPVP 259
Query: 207 TRDLQYNNKQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGP 266
+ Y T+ L SL N F C D NVY G K V + GH+
Sbjct: 260 VKLFPYPGNSTRKLGYSSLVLDPTGTNLFA-SCTDDNVYMFNATGLKTDPVSVFRGHQNS 318
Query: 267 VVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKE--NKPVHSFNEFRDYVMDVQWSPIN 324
+ + + L+ S D S +W + + P++ ++ V V W +
Sbjct: 319 TFYIKASVSPD----GQFLLSGSSDHSAYIWQVSDPLAAPINLIGHCQE-VTSVAWCQSD 373
Query: 325 PALFATVEVAGRVDLWNLNLDTE 347
AT V +W LN +E
Sbjct: 374 FTKIATCSDDNTVRIWRLNRSSE 396
>sp|Q8WVS4|WDR60_HUMAN WD repeat-containing protein 60 OS=Homo sapiens GN=WDR60 PE=1 SV=3
Length = 1066
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 115/315 (36%), Gaps = 77/315 (24%)
Query: 98 VCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKK---- 153
V +W+ ++ + P+ C+S V CC + +L+ GT G +V+WD R +
Sbjct: 677 VLCVWDI-WQPSGPQKVLICESQVTCCCLSPLKAFLLFAGTAHGSVVVWDLREDSRLHYS 735
Query: 154 ---------------------TPV-HRTPL------SVMAHTHPVFCMSVIGTQN----- 180
T V HR+PL S H F +S TQ
Sbjct: 736 VTLSDGFWTFRTATFSTDGILTSVNHRSPLQAVEPISTSVHKKQSFVLSPFSTQEEMSGL 795
Query: 181 AHNLISISNDGRLCSWSLEMLSSPQ---ETRDL-----------------------QYNN 214
+ ++ S+ G L W + L DL N
Sbjct: 796 SFHIASLDESGVLNVWVVVELPKADIAGSISDLGLMPGGRVKLVHSALIQLGDSLSHKGN 855
Query: 215 KQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNK-AGNVECYEGHEGPVVGLSSH 273
+ L++ F +D N+F++G + G + R + A + + H V ++
Sbjct: 856 EFWGTTQTLNVKFLPSDPNHFIIGTDMGLISHGTRQDLRVAPKLFKPQQHGIRPVKVNV- 914
Query: 274 RAQGHIDFS----HLYLTSSYDWSVKLWNIKENKPVHSFNEFRD--YVMDVQWSPINPAL 327
IDFS ++L D S++L + P+ ++ D V +QWSP PA+
Sbjct: 915 -----IDFSPFGEPIFLAGCSDGSIRLHQLSSAFPLLQWDSSTDSHAVTGLQWSPTRPAV 969
Query: 328 FATVEVAGRVDLWNL 342
F + + +W+L
Sbjct: 970 FLVQDDTSNIYIWDL 984
>sp|Q3B7M6|NEDD1_BOVIN Protein NEDD1 OS=Bos taurus GN=NEDD1 PE=2 SV=1
Length = 659
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 9/124 (7%)
Query: 269 GLSSHRAQGHIDFS----HLYLTSSYDWSVKLWNIKENKPVHSFNE-FRDYVMDVQWSPI 323
G S+++ H+ +S L + S + V LW++ P H+F+ + + +SP+
Sbjct: 158 GHGSNQSIRHLKYSLFKKSLLGSVSDNGIVTLWDVNSQSPYHNFDSTHKAPASGICFSPV 217
Query: 324 NPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAIT 383
N LF TV + R+ L++ + V +V AP L+ V + P+G L +G +G I
Sbjct: 218 NELLFVTVGLDKRIILYDTSSKKLV---KTLVADAP-LTAVDFMPDGATLAIGSSRGKIY 273
Query: 384 MFDV 387
+D+
Sbjct: 274 QYDL 277
Score = 39.3 bits (90), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 13/114 (11%)
Query: 96 DGVCLIWNTKFKKTTPEFEFFCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQK--K 153
+G+ +W+ + F+ ++P CF+ N L + +I+L+DT +K K
Sbjct: 184 NGIVTLWDVNSQSPYHNFDSTHKAPASGICFSPVNELLFVTVGLDKRIILYDTSSKKLVK 243
Query: 154 TPVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQET 207
T V PL+ + P IG S+ G++ + L ML SP +T
Sbjct: 244 TLVADAPLTAVDFM-PDGATLAIG----------SSRGKIYQYDLRMLKSPIKT 286
>sp|Q3SWX8|RBBP7_BOVIN Histone-binding protein RBBP7 OS=Bos taurus GN=RBBP7 PE=2 SV=1
Length = 425
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 114/291 (39%), Gaps = 51/291 (17%)
Query: 130 NPYLILGGTYSGQIVLWDTRVQKKTPVHRTP-------LSVMAHTHPVFCMSVIGTQNAH 182
NP++I T S ++++D K P P L + H + +S + H
Sbjct: 135 NPHIIATKTPSSDVLVFD---YTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGH 191
Query: 183 NLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVL----------SLAFPQNDV 232
L+S S+D +C W + + P+E + + T + AV+ SL D
Sbjct: 192 -LLSASDDHTVCLWDIN--AGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADD 248
Query: 233 NNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYL-TSSYD 291
++ N S H + H V LS + +S L T S D
Sbjct: 249 QKLMIWDTRSNTTSKPSH--------LVDAHTAEVNCLSFNP------YSEFILATGSAD 294
Query: 292 WSVKLWNIKENK-PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPA 350
+V LW+++ K +H+F +D + V WSP N + A+ R+++W+L+ E +
Sbjct: 295 KTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQS 354
Query: 351 TSAIVEGAPAL-----------SRVTWTPNGT-QLCVGDEKGAITMFDVGE 389
+G P L S +W PN +C E + ++ + E
Sbjct: 355 AEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 405
>sp|Q60973|RBBP7_MOUSE Histone-binding protein RBBP7 OS=Mus musculus GN=Rbbp7 PE=1 SV=1
Length = 425
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 114/291 (39%), Gaps = 51/291 (17%)
Query: 130 NPYLILGGTYSGQIVLWDTRVQKKTPVHRTP-------LSVMAHTHPVFCMSVIGTQNAH 182
NP++I T S ++++D K P P L + H + +S + H
Sbjct: 135 NPHIIATKTPSSDVLVFD---YTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGH 191
Query: 183 NLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVL----------SLAFPQNDV 232
L+S S+D +C W + + P+E + + T + AV+ SL D
Sbjct: 192 -LLSASDDHTVCLWDIN--AGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADD 248
Query: 233 NNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYL-TSSYD 291
++ N S H + H V LS + +S L T S D
Sbjct: 249 QKLMIWDTRSNTTSKPSH--------LVDAHTAEVNCLSFNP------YSEFILATGSAD 294
Query: 292 WSVKLWNIKENK-PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPA 350
+V LW+++ K +H+F +D + V WSP N + A+ R+++W+L+ E +
Sbjct: 295 KTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQS 354
Query: 351 TSAIVEGAPAL-----------SRVTWTPNGT-QLCVGDEKGAITMFDVGE 389
+G P L S +W PN +C E + ++ + E
Sbjct: 355 AEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 405
>sp|Q71UF4|RBBP7_RAT Histone-binding protein RBBP7 OS=Rattus norvegicus GN=Rbbp7 PE=2
SV=1
Length = 425
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 114/291 (39%), Gaps = 51/291 (17%)
Query: 130 NPYLILGGTYSGQIVLWDTRVQKKTPVHRTP-------LSVMAHTHPVFCMSVIGTQNAH 182
NP++I T S ++++D K P P L + H + +S + H
Sbjct: 135 NPHIIATKTPSSDVLVFD---YTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGH 191
Query: 183 NLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVL----------SLAFPQNDV 232
L+S S+D +C W + + P+E + + T + AV+ SL D
Sbjct: 192 -LLSASDDHTVCLWDIN--AGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADD 248
Query: 233 NNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYL-TSSYD 291
++ N S H + H V LS + +S L T S D
Sbjct: 249 QKLMIWDTRSNTTSKPSH--------LVDAHTAEVNCLSFNP------YSEFILATGSAD 294
Query: 292 WSVKLWNIKENK-PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPA 350
+V LW+++ K +H+F +D + V WSP N + A+ R+++W+L+ E +
Sbjct: 295 KTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQS 354
Query: 351 TSAIVEGAPAL-----------SRVTWTPNGT-QLCVGDEKGAITMFDVGE 389
+G P L S +W PN +C E + ++ + E
Sbjct: 355 AEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 405
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 165,349,128
Number of Sequences: 539616
Number of extensions: 7235594
Number of successful extensions: 17263
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 502
Number of HSP's that attempted gapping in prelim test: 15990
Number of HSP's gapped (non-prelim): 1531
length of query: 401
length of database: 191,569,459
effective HSP length: 120
effective length of query: 281
effective length of database: 126,815,539
effective search space: 35635166459
effective search space used: 35635166459
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)