Your job contains 1 sequence.
>psy17342
MDWAEAGESQISGTLHGLQADWNEEGDPGLPQLPQDLQFDMTGDEKSSTKLSFCRQFFDE
KWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNTKFKKTTPEFEFFCQSP
VLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIGTQN
AHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLSLAFPQNDVNNFVVGCE
DGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIK
ENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPA
LSRVTWTPNGTQLCVGDEKGAITMFDVGEVGIACLKFITSG
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17342
(401 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1PSE8 - symbol:DYNC1I1 "Uncharacterized protei... 1183 1.3e-122 2
UNIPROTKB|O14576 - symbol:DYNC1I1 "Cytoplasmic dynein 1 i... 1183 1.3e-122 2
MGI|MGI:107743 - symbol:Dync1i1 "dynein cytoplasmic 1 int... 1184 2.2e-122 2
UNIPROTKB|F1SF88 - symbol:LOC100523985 "Uncharacterized p... 1178 4.5e-122 2
FB|FBgn0003654 - symbol:sw "short wing" species:7227 "Dro... 1188 9.5e-121 1
FB|FBgn0053497 - symbol:Sdic2 "Sperm-specific dynein inte... 1187 1.2e-120 1
FB|FBgn0053499 - symbol:Sdic4 "Sperm-specific dynein inte... 1187 1.2e-120 1
UNIPROTKB|E1C7N2 - symbol:DYNC1I1 "Uncharacterized protei... 1185 2.0e-120 1
UNIPROTKB|Q29RQ3 - symbol:DYNC1I1 "Cytoplasmic dynein 1 i... 1185 2.0e-120 1
UNIPROTKB|F5H050 - symbol:DYNC1I1 "Cytoplasmic dynein 1 i... 1185 2.0e-120 1
MGI|MGI:107750 - symbol:Dync1i2 "dynein cytoplasmic 1 int... 1184 2.5e-120 1
UNIPROTKB|D4A9K8 - symbol:Dync1i1 "Cytoplasmic dynein 1 i... 1184 2.5e-120 1
UNIPROTKB|G3V9V3 - symbol:Dync1i2 "Cytoplasmic dynein 1 i... 1184 2.5e-120 1
UNIPROTKB|Q6AZ35 - symbol:Dync1i2 "Cytoplasmic dynein 1 i... 1184 2.5e-120 1
UNIPROTKB|G5E9K1 - symbol:DYNC1I1 "Dynein, cytoplasmic 1,... 1183 3.2e-120 1
RGD|2512 - symbol:Dync1i1 "dynein cytoplasmic 1 intermedi... 1182 4.1e-120 1
UNIPROTKB|F1N7H7 - symbol:DYNC1I2 "Cytoplasmic dynein 1 i... 1181 5.2e-120 1
UNIPROTKB|Q0III3 - symbol:DYNC1I2 "Cytoplasmic dynein 1 i... 1181 5.2e-120 1
UNIPROTKB|E2RM92 - symbol:DYNC1I2 "Uncharacterized protei... 1181 5.2e-120 1
UNIPROTKB|E2RMA7 - symbol:DYNC1I2 "Uncharacterized protei... 1181 5.2e-120 1
UNIPROTKB|B7ZA04 - symbol:DYNC1I2 "cDNA, FLJ79018, highly... 1181 5.2e-120 1
UNIPROTKB|F8W8S0 - symbol:DYNC1I2 "Cytoplasmic dynein 1 i... 1181 5.2e-120 1
UNIPROTKB|Q13409 - symbol:DYNC1I2 "Cytoplasmic dynein 1 i... 1181 5.2e-120 1
UNIPROTKB|F1S087 - symbol:DYNC1I2 "Uncharacterized protei... 1181 5.2e-120 1
UNIPROTKB|Q5NVM2 - symbol:DYNC1I2 "Cytoplasmic dynein 1 i... 1181 5.2e-120 1
UNIPROTKB|F1P3C7 - symbol:DYNC1I2 "Uncharacterized protei... 1174 2.9e-119 1
ZFIN|ZDB-GENE-090121-1 - symbol:dync1i2b "dynein, cytopla... 1171 6.0e-119 1
RGD|620174 - symbol:Dync1i2 "dynein cytoplasmic 1 interme... 1169 9.8e-119 1
ZFIN|ZDB-GENE-060929-1086 - symbol:dync1i2a "dynein, cyto... 1164 3.3e-118 1
ZFIN|ZDB-GENE-061215-62 - symbol:dync1i1 "dynein, cytopla... 1130 1.3e-114 1
FB|FBgn0052823 - symbol:Sdic3 "Sperm-specific dynein inte... 1125 4.5e-114 1
FB|FBgn0067861 - symbol:Sdic1 "Sperm-specific dynein inte... 916 1.2e-100 2
DICTYBASE|DDB_G0280849 - symbol:dicA "cytoplasmic dynein ... 823 4.5e-82 1
ASPGD|ASPL0000049823 - symbol:nudI species:162425 "Emeric... 584 4.6e-78 2
WB|WBGene00015927 - symbol:dyci-1 species:6239 "Caenorhab... 752 1.5e-74 1
UNIPROTKB|O45087 - symbol:dyci-1 "Protein DYCI-1" species... 752 1.5e-74 1
GENEDB_PFALCIPARUM|PF10_0196 - symbol:PF10_0196 "cytoplas... 636 3.0e-62 1
UNIPROTKB|Q8IJJ9 - symbol:PF10_0196 "Cytoplasmic dynein i... 636 3.0e-62 1
UNIPROTKB|G4MTS7 - symbol:MGG_04771 "Cytoplasmic dynein 1... 580 2.5e-56 1
POMBASE|SPBC646.17c - symbol:dic1 "meiotic dynein interme... 293 9.6e-38 2
ZFIN|ZDB-GENE-050522-322 - symbol:wdr78 "WD repeat domain... 306 3.0e-26 1
UNIPROTKB|I3LLI7 - symbol:DNAI2 "Uncharacterized protein"... 297 1.3e-25 1
MGI|MGI:2685574 - symbol:Dnaic2 "dynein, axonemal, interm... 296 2.1e-25 1
UNIPROTKB|E1BPM9 - symbol:DNAI2 "Uncharacterized protein"... 295 2.6e-25 1
RGD|1359602 - symbol:Dnai2 "dynein, axonemal, intermediat... 291 7.2e-25 1
UNIPROTKB|Q9GZS0 - symbol:DNAI2 "Dynein intermediate chai... 288 1.4e-24 1
ZFIN|ZDB-GENE-070410-46 - symbol:zgc:162235 "zgc:162235" ... 282 2.5e-23 1
UNIPROTKB|F1NQ70 - symbol:DNAI2 "Uncharacterized protein"... 280 5.2e-23 1
UNIPROTKB|P27766 - symbol:ODA6 "Dynein, 70 kDa intermedia... 272 1.3e-21 1
MGI|MGI:2385328 - symbol:Wdr78 "WD repeat domain 78" spec... 202 1.3e-19 2
UNIPROTKB|E7EQL5 - symbol:DYNC1I2 "Cytoplasmic dynein 1 i... 227 1.6e-18 1
ZFIN|ZDB-GENE-070112-1302 - symbol:zgc:158666 "zgc:158666... 246 3.3e-18 1
UNIPROTKB|Q32KS2 - symbol:DNAI1 "Dynein intermediate chai... 243 8.5e-18 1
UNIPROTKB|F1PBZ6 - symbol:DNAI1 "Uncharacterized protein"... 233 1.2e-16 1
RGD|1565671 - symbol:Dnai1 "dynein, axonemal, intermediat... 225 1.1e-15 1
MGI|MGI:1916172 - symbol:Dnaic1 "dynein, axonemal, interm... 222 2.3e-15 1
ZFIN|ZDB-GENE-070928-9 - symbol:dync2i1 "dynein, cytoplas... 147 9.9e-14 2
UNIPROTKB|Q9UI46 - symbol:DNAI1 "Dynein intermediate chai... 201 5.4e-13 1
UNIPROTKB|F1NB77 - symbol:Gga.16647 "Uncharacterized prot... 195 1.9e-12 1
FB|FBgn0034566 - symbol:CG9313 species:7227 "Drosophila m... 189 1.3e-11 1
UNIPROTKB|Q96EX3 - symbol:WDR34 "WD repeat-containing pro... 181 6.0e-11 1
FB|FBgn0029993 - symbol:CG1571 species:7227 "Drosophila m... 177 2.4e-10 1
FB|FBgn0036195 - symbol:CG6053 species:7227 "Drosophila m... 170 1.2e-09 1
UNIPROTKB|F1NVZ6 - symbol:Gga.9664 "Uncharacterized prote... 118 2.8e-08 2
FB|FBgn0263979 - symbol:Caf1 "Chromatin assembly factor 1... 152 7.0e-08 1
MGI|MGI:2445085 - symbol:Wdr60 "WD repeat domain 60" spec... 108 1.4e-07 2
RGD|1306493 - symbol:Wdr60 "WD repeat domain 60" species:... 107 1.8e-07 2
UNIPROTKB|Q9I8G9 - symbol:RBBP7 "Histone-binding protein ... 143 6.9e-07 1
UNIPROTKB|I3LKT8 - symbol:RBBP4 "Uncharacterized protein"... 142 7.6e-07 1
MGI|MGI:1919070 - symbol:Wdr34 "WD repeat domain 34" spec... 144 7.9e-07 1
UNIPROTKB|F2Z4M0 - symbol:RBBP4 "Histone-binding protein ... 142 9.0e-07 1
UNIPROTKB|Q9W7I5 - symbol:RBBP4 "Histone-binding protein ... 142 9.0e-07 1
UNIPROTKB|Q3MHL3 - symbol:RBBP4 "Histone-binding protein ... 142 9.0e-07 1
UNIPROTKB|E2QXR8 - symbol:RBBP4 "Uncharacterized protein"... 142 9.0e-07 1
UNIPROTKB|Q09028 - symbol:RBBP4 "Histone-binding protein ... 142 9.0e-07 1
UNIPROTKB|Q5RF92 - symbol:RBBP4 "Histone-binding protein ... 142 9.0e-07 1
MGI|MGI:1194912 - symbol:Rbbp4 "retinoblastoma binding pr... 142 9.0e-07 1
RGD|1593768 - symbol:Rbbp4 "retinoblastoma binding protei... 142 9.0e-07 1
UNIPROTKB|Q5M7K4 - symbol:rbbp4 "Histone-binding protein ... 141 1.2e-06 1
DICTYBASE|DDB_G0282529 - symbol:rbbD "putative Retinoblas... 139 1.9e-06 1
UNIPROTKB|O93377 - symbol:rbbp4-a "Histone-binding protei... 138 2.5e-06 1
UNIPROTKB|Q6INH0 - symbol:rbbp4-b "Histone-binding protei... 138 2.5e-06 1
FB|FBgn0036973 - symbol:Rbbp5 species:7227 "Drosophila me... 121 2.7e-06 2
UNIPROTKB|Q8AVH1 - symbol:rbbp7 "Histone-binding protein ... 137 3.2e-06 1
ZFIN|ZDB-GENE-030131-848 - symbol:rbb4l "retinoblastoma b... 137 3.3e-06 1
ZFIN|ZDB-GENE-030131-445 - symbol:rbb4 "retinoblastoma bi... 136 4.5e-06 1
UNIPROTKB|E9PC52 - symbol:RBBP7 "Histone-binding protein ... 135 5.2e-06 1
UNIPROTKB|K7GRD3 - symbol:LOC100519001 "Uncharacterized p... 135 5.2e-06 1
UNIPROTKB|Q3SWX8 - symbol:RBBP7 "Histone-binding protein ... 135 5.4e-06 1
UNIPROTKB|E2RM49 - symbol:RBBP7 "Uncharacterized protein"... 135 5.4e-06 1
UNIPROTKB|Q16576 - symbol:RBBP7 "Histone-binding protein ... 135 5.4e-06 1
UNIPROTKB|F1SQR0 - symbol:LOC100519001 "Uncharacterized p... 135 5.4e-06 1
UNIPROTKB|Q4R304 - symbol:RBBP7 "Histone-binding protein ... 135 5.4e-06 1
MGI|MGI:1194910 - symbol:Rbbp7 "retinoblastoma binding pr... 135 5.4e-06 1
RGD|620125 - symbol:Rbbp7 "retinoblastoma binding protein... 135 5.4e-06 1
UNIPROTKB|E2RM67 - symbol:RBBP7 "Uncharacterized protein"... 135 6.4e-06 1
UNIPROTKB|I3LV46 - symbol:LOC100519001 "Uncharacterized p... 135 6.4e-06 1
UNIPROTKB|Q6P315 - symbol:rbbp7 "Histone-binding protein ... 134 7.0e-06 1
POMBASE|SPAC29A4.18 - symbol:prw1 "Clr6 histone deacetyla... 134 7.2e-06 1
UNIPROTKB|Q6GPU3 - symbol:dtl-b "Denticleless protein hom... 112 1.1e-05 2
WARNING: Descriptions of 45 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|F1PSE8 [details] [associations]
symbol:DYNC1I1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0005868 "cytoplasmic dynein complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025956 Pfam:PF00400 Pfam:PF11540
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0007018 GeneTree:ENSGT00690000101848 OMA:SLHFLTW
GO:GO:0005868 EMBL:AAEX03009317 Ensembl:ENSCAFT00000003385
Uniprot:F1PSE8
Length = 628
Score = 1183 (421.5 bits), Expect = 1.3e-122, Sum P(2) = 1.3e-122
Identities = 212/379 (55%), Positives = 282/379 (74%)
Query: 14 TLHGLQADWNEEGDPGLPQLPQDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDW 73
T+ ++ E+ D ++L+ + GD ++ LSF RQF+DE WSK+R VT MDW
Sbjct: 220 TIRVIERALAEDSDIFFDYSGRELE-EKDGDVQAGANLSFNRQFYDEHWSKHRVVTCMDW 278
Query: 74 STQHPELLLASYHRNKEAPNEPDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYL 133
S Q+PEL++ASY+ N++AP+EPDGV L+WN CQS V+S CFA+F+P L
Sbjct: 279 SLQYPELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNL 338
Query: 134 ILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRL 193
++GGTYSGQIVLWD R ++TPV RTPLS AHTHPV+C++V+GTQNAHNLI++S DG++
Sbjct: 339 VVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLITVSTDGKM 398
Query: 194 CSWSLEMLSSPQETRDLQYNNKQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNK 253
CSWSL+MLS+PQE+ +L YN ++K +AV +AFP DVNNFVVG E+G VY+ACRHG+K
Sbjct: 399 CSWSLDMLSTPQESMELVYN--KSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSK 456
Query: 254 AGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRD 313
AG E +EGH+GPV G++ H A G IDFSHL++TSS+DW+VKLW K NKP++SF + D
Sbjct: 457 AGIGEVFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTVKLWTTKHNKPLYSFEDNAD 516
Query: 314 YVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQL 373
YV DV WSP++PALFA V+ GR+DLWNLN DTEVP S +EGA AL+RV W G ++
Sbjct: 517 YVYDVMWSPVHPALFACVDGMGRLDLWNLNNDTEVPTASVAIEGASALNRVRWAQAGKEV 576
Query: 374 CVGDEKGAITMFDVGEVGI 392
VGD +G I ++DVGE+ +
Sbjct: 577 AVGDSEGRIWIYDVGELAV 595
Score = 43 (20.2 bits), Expect = 1.3e-122, Sum P(2) = 1.3e-122
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 4 AEAGESQISGTLHGLQADWNEEGDPGLPQLPQD 36
+EAG SQ SG L L + DP + QL D
Sbjct: 90 SEAG-SQDSGDLGPLTRTLQWDTDPSVLQLQSD 121
>UNIPROTKB|O14576 [details] [associations]
symbol:DYNC1I1 "Cytoplasmic dynein 1 intermediate chain 1"
species:9606 "Homo sapiens" [GO:0005874 "microtubule" evidence=IEA]
[GO:0000777 "condensed chromosome kinetochore" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0000776 "kinetochore"
evidence=IDA] [GO:0005868 "cytoplasmic dynein complex"
evidence=ISS] [GO:0031982 "vesicle" evidence=IDA] [GO:0003774
"motor activity" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0005829 "cytosol" evidence=TAS] [GO:0019886
"antigen processing and presentation of exogenous peptide antigen
via MHC class II" evidence=TAS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0003777 "microtubule motor activity"
evidence=ISS] [GO:0047496 "vesicle transport along microtubule"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025956 Pfam:PF00400 Pfam:PF11540
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005829
GO:GO:0048471 Reactome:REACT_6900 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0019886 GO:GO:0008017
GO:GO:0000922 GO:GO:0005874 GO:GO:0031982 GO:GO:0003777
GO:GO:0000777 GO:GO:0047496 EMBL:AC002540 CTD:1780 eggNOG:NOG308180
HOGENOM:HOG000116383 HOVERGEN:HBG004083 KO:K10415 OMA:SLHFLTW
OrthoDB:EOG4RBQJ5 GO:GO:0005868 EMBL:AF063228 EMBL:AF123074
EMBL:AK091339 EMBL:AC022261 EMBL:AC091779 EMBL:AC002452
IPI:IPI00022461 IPI:IPI00220137 IPI:IPI01012006
RefSeq:NP_001129028.1 RefSeq:NP_001129029.1 RefSeq:NP_004402.1
UniGene:Hs.440364 DisProt:DP00360 ProteinModelPortal:O14576
SMR:O14576 IntAct:O14576 MINT:MINT-156403 STRING:O14576
PhosphoSite:O14576 PaxDb:O14576 PRIDE:O14576
Ensembl:ENST00000324972 Ensembl:ENST00000359388
Ensembl:ENST00000447467 Ensembl:ENST00000457059 GeneID:1780
KEGG:hsa:1780 UCSC:uc003uob.3 UCSC:uc003uoc.4 UCSC:uc003uod.4
GeneCards:GC07P095401 HGNC:HGNC:2963 HPA:HPA021315 MIM:603772
neXtProt:NX_O14576 PharmGKB:PA27434 InParanoid:O14576
PhylomeDB:O14576 GenomeRNAi:1780 NextBio:7243 ArrayExpress:O14576
Bgee:O14576 CleanEx:HS_DYNC1I1 Genevestigator:O14576
GermOnline:ENSG00000158560 Uniprot:O14576
Length = 645
Score = 1183 (421.5 bits), Expect = 1.3e-122, Sum P(2) = 1.3e-122
Identities = 212/379 (55%), Positives = 282/379 (74%)
Query: 14 TLHGLQADWNEEGDPGLPQLPQDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDW 73
T+ ++ E+ D ++L+ + GD ++ LSF RQF+DE WSK+R VT MDW
Sbjct: 237 TIRVIERALAEDSDIFFDYSGRELE-EKDGDVQAGANLSFNRQFYDEHWSKHRVVTCMDW 295
Query: 74 STQHPELLLASYHRNKEAPNEPDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYL 133
S Q+PEL++ASY+ N++AP+EPDGV L+WN CQS V+S CFA+F+P L
Sbjct: 296 SLQYPELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNL 355
Query: 134 ILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRL 193
++GGTYSGQIVLWD R ++TPV RTPLS AHTHPV+C++V+GTQNAHNLI++S DG++
Sbjct: 356 VVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLITVSTDGKM 415
Query: 194 CSWSLEMLSSPQETRDLQYNNKQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNK 253
CSWSL+MLS+PQE+ +L YN ++K +AV +AFP DVNNFVVG E+G VY+ACRHG+K
Sbjct: 416 CSWSLDMLSTPQESMELVYN--KSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSK 473
Query: 254 AGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRD 313
AG E +EGH+GPV G++ H A G IDFSHL++TSS+DW+VKLW K NKP++SF + D
Sbjct: 474 AGIGEVFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTVKLWTTKHNKPLYSFEDNAD 533
Query: 314 YVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQL 373
YV DV WSP++PALFA V+ GR+DLWNLN DTEVP S +EGA AL+RV W G ++
Sbjct: 534 YVYDVMWSPVHPALFACVDGMGRLDLWNLNNDTEVPTASVAIEGASALNRVRWAQAGKEV 593
Query: 374 CVGDEKGAITMFDVGEVGI 392
VGD +G I ++DVGE+ +
Sbjct: 594 AVGDSEGRIWVYDVGELAV 612
Score = 43 (20.2 bits), Expect = 1.3e-122, Sum P(2) = 1.3e-122
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 4 AEAGESQISGTLHGLQADWNEEGDPGLPQLPQD 36
+EAG SQ SG L L + DP + QL D
Sbjct: 107 SEAG-SQDSGDLGPLTRTLQWDTDPSVLQLQSD 138
>MGI|MGI:107743 [details] [associations]
symbol:Dync1i1 "dynein cytoplasmic 1 intermediate chain 1"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0000776 "kinetochore" evidence=ISO]
[GO:0000922 "spindle pole" evidence=ISO] [GO:0003774 "motor
activity" evidence=IEA] [GO:0003777 "microtubule motor activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005868
"cytoplasmic dynein complex" evidence=ISO] [GO:0005874
"microtubule" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0007018 "microtubule-based movement" evidence=IEA] [GO:0008017
"microtubule binding" evidence=ISO] [GO:0030286 "dynein complex"
evidence=TAS] [GO:0031982 "vesicle" evidence=ISO] [GO:0047496
"vesicle transport along microtubule" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025956
Pfam:PF00400 Pfam:PF11540 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:107743 GO:GO:0048471 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0008017
GO:GO:0000922 GO:GO:0005874 GO:GO:0031982 GO:GO:0003777
EMBL:CH466533 GO:GO:0000777 GO:GO:0047496 CTD:1780 eggNOG:NOG308180
GeneTree:ENSGT00690000101848 HOGENOM:HOG000116383
HOVERGEN:HBG004083 KO:K10415 GO:GO:0005868 EMBL:AF063229
EMBL:AF063230 EMBL:BC051992 IPI:IPI00131084 IPI:IPI00226946
RefSeq:NP_001177952.1 RefSeq:NP_001177954.1 RefSeq:NP_034193.2
UniGene:Mm.20893 ProteinModelPortal:O88485 SMR:O88485 IntAct:O88485
MINT:MINT-3088793 STRING:O88485 PhosphoSite:O88485 PaxDb:O88485
PRIDE:O88485 Ensembl:ENSMUST00000115554 Ensembl:ENSMUST00000115559
GeneID:13426 KEGG:mmu:13426 NextBio:283843 Bgee:O88485
CleanEx:MM_DYNC1I1 Genevestigator:O88485
GermOnline:ENSMUSG00000029757 Uniprot:O88485
Length = 628
Score = 1184 (421.8 bits), Expect = 2.2e-122, Sum P(2) = 2.2e-122
Identities = 212/379 (55%), Positives = 281/379 (74%)
Query: 14 TLHGLQADWNEEGDPGLPQLPQDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDW 73
T+ ++ E+ D ++L+ + GD ++ LSF RQF+DE WSK+R VT MDW
Sbjct: 220 TIRVIERALAEDSDIFFDYSGRELE-EKDGDVQAGANLSFNRQFYDEHWSKHRVVTCMDW 278
Query: 74 STQHPELLLASYHRNKEAPNEPDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYL 133
S Q+PEL++ASY N++AP+EPDGV L+WN CQS V+S CFA+F+P L
Sbjct: 279 SLQYPELMVASYSNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNL 338
Query: 134 ILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRL 193
++GGTYSGQIVLWD R ++TPV RTPLS AHTHPV+C++V+GTQNAHNLI++S DG++
Sbjct: 339 VVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLITVSTDGKM 398
Query: 194 CSWSLEMLSSPQETRDLQYNNKQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNK 253
CSWSL+MLS+PQE+ +L YN ++K +AV +AFP DVNNFVVG E+G VY+ACRHG+K
Sbjct: 399 CSWSLDMLSTPQESMELVYN--KSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSK 456
Query: 254 AGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRD 313
AG E +EGH+GPV G++ H A G IDFSHL++TSS+DW+VKLW K NKP++SF + D
Sbjct: 457 AGIGEVFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTVKLWTTKHNKPLYSFEDNAD 516
Query: 314 YVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQL 373
YV DV WSP++PALFA V+ GR+DLWNLN DTEVP S +EGA AL+RV W G ++
Sbjct: 517 YVYDVMWSPVHPALFACVDGMGRLDLWNLNSDTEVPTASVAIEGASALNRVRWAQGGKEV 576
Query: 374 CVGDEKGAITMFDVGEVGI 392
VGD +G I ++DVGE+ +
Sbjct: 577 AVGDSEGRIWIYDVGELAV 595
Score = 40 (19.1 bits), Expect = 2.2e-122, Sum P(2) = 2.2e-122
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 4 AEAGESQISGTLHGLQADWNEEGDPGLPQLPQD 36
++AG SQ SG L L + DP + QL D
Sbjct: 90 SDAG-SQDSGDLGPLTRTLQWDTDPSVLQLQSD 121
>UNIPROTKB|F1SF88 [details] [associations]
symbol:LOC100523985 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0007018 "microtubule-based movement" evidence=IEA]
[GO:0005868 "cytoplasmic dynein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025956 Pfam:PF00400 Pfam:PF11540 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0007018
GeneTree:ENSGT00690000101848 OMA:SLHFLTW GO:GO:0005868
EMBL:FP102837 EMBL:CU914326 Ensembl:ENSSSCT00000016708
Uniprot:F1SF88
Length = 552
Score = 1178 (419.7 bits), Expect = 4.5e-122, Sum P(2) = 4.5e-122
Identities = 211/379 (55%), Positives = 281/379 (74%)
Query: 14 TLHGLQADWNEEGDPGLPQLPQDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDW 73
T+ ++ E+ D ++L+ + GD ++ LSF RQF+DE WSK+R VT MDW
Sbjct: 144 TIRVIERALAEDSDIFFDYSGRELE-EKDGDVQAGANLSFNRQFYDEHWSKHRVVTCMDW 202
Query: 74 STQHPELLLASYHRNKEAPNEPDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYL 133
S Q+PEL++ASY+ N++AP+EPDGV L+WN CQS V+S CFA+F+P L
Sbjct: 203 SLQYPELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNL 262
Query: 134 ILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRL 193
++GGTYSGQIVLWD R ++TPV RTPLS AHTHPV+C++V+GTQNAHNLI++S DG++
Sbjct: 263 VVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLITVSTDGKM 322
Query: 194 CSWSLEMLSSPQETRDLQYNNKQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNK 253
CSWSL+MLS+PQE+ +L YN ++K +AV +AFP DVNNFVVG E+G VY+ACRHG+K
Sbjct: 323 CSWSLDMLSTPQESMELVYN--KSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSK 380
Query: 254 AGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRD 313
AG E +EGH+GPV G++ H A G IDFSHL++TSS+DW+VKLW K NKP++SF + D
Sbjct: 381 AGIGEVFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTVKLWTTKHNKPLYSFEDNAD 440
Query: 314 YVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQL 373
YV DV WSP++PALFA V+ GR+DLWNLN DTEVP S +EGA AL+ V W G ++
Sbjct: 441 YVYDVMWSPVHPALFACVDGMGRLDLWNLNNDTEVPTASVAIEGASALNHVRWAQAGKEV 500
Query: 374 CVGDEKGAITMFDVGEVGI 392
VGD +G I ++DVGE+ +
Sbjct: 501 AVGDSEGRIWIYDVGELAV 519
Score = 43 (20.2 bits), Expect = 4.5e-122, Sum P(2) = 4.5e-122
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 4 AEAGESQISGTLHGLQADWNEEGDPGLPQLPQD 36
+EAG SQ SG L L + DP + QL D
Sbjct: 12 SEAG-SQDSGDLGPLTRTLQWDTDPSVLQLQSD 43
>FB|FBgn0003654 [details] [associations]
symbol:sw "short wing" species:7227 "Drosophila melanogaster"
[GO:0005868 "cytoplasmic dynein complex" evidence=IEA;NAS]
[GO:0003777 "microtubule motor activity" evidence=NAS] [GO:0001754
"eye photoreceptor cell differentiation" evidence=IGI] [GO:0016482
"cytoplasmic transport" evidence=IMP] [GO:0034501 "protein
localization to kinetochore" evidence=IMP] [GO:0007291 "sperm
individualization" evidence=IMP] [GO:0007051 "spindle organization"
evidence=IMP] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0045503 "dynein light chain binding" evidence=IPI] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0008088
"axon cargo transport" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025956
Pfam:PF00400 Pfam:PF11540 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005875 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005765 EMBL:AE014298 GO:GO:0031965
GO:GO:0008088 GO:GO:0051642 GO:GO:0007291 GO:GO:0005874
GO:GO:0034501 EMBL:L41945 GO:GO:0003774 GO:GO:0016482 GO:GO:0007051
ChiTaRS:SLC4A1 GO:GO:0001754 eggNOG:NOG308180
GeneTree:ENSGT00690000101848 KO:K10415 GO:GO:0005868 EMBL:AF070687
EMBL:AF070689 EMBL:AF070690 EMBL:AF070691 EMBL:AF070692
EMBL:AF070693 EMBL:AF070694 EMBL:AF070695 EMBL:AF070696
EMBL:AF070697 EMBL:AF070698 EMBL:AF070699 EMBL:AF263371
EMBL:BT016101 RefSeq:NP_477069.1 RefSeq:NP_477070.1
RefSeq:NP_477071.1 RefSeq:NP_477072.1 RefSeq:NP_477073.1
RefSeq:NP_477074.1 RefSeq:NP_477075.2 RefSeq:NP_477076.1
RefSeq:NP_477077.1 RefSeq:NP_477078.1 RefSeq:NP_477079.1
RefSeq:NP_996521.1 RefSeq:NP_996522.1 UniGene:Dm.20780 PDB:2P2T
PDB:3FM7 PDB:3L9K PDBsum:2P2T PDBsum:3FM7 PDBsum:3L9K
ProteinModelPortal:Q24246 SMR:Q24246 DIP:DIP-19664N IntAct:Q24246
MINT:MINT-1717948 STRING:Q24246 PaxDb:Q24246
EnsemblMetazoa:FBtr0089406 GeneID:44160 KEGG:dme:Dmel_CG18000
CTD:44160 FlyBase:FBgn0003654 InParanoid:Q24246 OMA:SAGHEDS
OrthoDB:EOG4WWQ0J PhylomeDB:Q24246 EvolutionaryTrace:Q24246
GenomeRNAi:44160 NextBio:836907 Bgee:Q24246 GermOnline:CG18000
Uniprot:Q24246
Length = 663
Score = 1188 (423.3 bits), Expect = 9.5e-121, P = 9.5e-121
Identities = 208/346 (60%), Positives = 269/346 (77%)
Query: 44 DEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWN 103
DE+S +LS R F+DE+WSKNR +T MDWST PEL++ SYH N+E+PNEPDGV ++WN
Sbjct: 292 DERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPELVVGSYHNNEESPNEPDGVVMVWN 351
Query: 104 XXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSV 163
CQS V+S CFAKFNP LILGGTYSGQIVLWD RVQK+TP+ RTPLS
Sbjct: 352 TKFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQIVLWDNRVQKRTPIQRTPLSA 411
Query: 164 MAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVL 223
AHTHPV+C+ ++GTQNAHN+ISIS+DG+LCSWSL+MLS PQ+T +LQ +Q+K +A+
Sbjct: 412 AAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQ--QRQSKAIAIT 469
Query: 224 SLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSH 283
S+AFP N++N+ V+G EDG VYSA RHG ++G E YE H GP+ G+S+H Q DF H
Sbjct: 470 SMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNEVYERHLGPITGISTHYNQLSPDFGH 529
Query: 284 LYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLN 343
L+LTSS DW++KLW++K+ KP++SF + DYVMDV WSP++PALFA V+ +GR+DLWNLN
Sbjct: 530 LFLTSSIDWTIKLWSLKDTKPLYSFEDNSDYVMDVAWSPVHPALFAAVDGSGRLDLWNLN 589
Query: 344 LDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
DTEVP S +V GAPAL+RV+WTP+G +C+GDE G + ++DV E
Sbjct: 590 QDTEVPTASIVVAGAPALNRVSWTPSGLHVCIGDEAGKLYVYDVAE 635
>FB|FBgn0053497 [details] [associations]
symbol:Sdic2 "Sperm-specific dynein intermediate chain 2"
species:7227 "Drosophila melanogaster" [GO:0005868 "cytoplasmic
dynein complex" evidence=IEA] [GO:0005858 "axonemal dynein complex"
evidence=ISS] [GO:0003777 "microtubule motor activity"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025956 Pfam:PF00400 Pfam:PF11540
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10
SUPFAM:SSF50978 EMBL:AE014298 GO:GO:0007018
GeneTree:ENSGT00690000101848 KO:K10415 GO:GO:0005868
OrthoDB:EOG4WWQ0J OMA:NQSSPDF RefSeq:NP_996516.1 RefSeq:NP_996519.1
UniGene:Dm.33740 UniGene:Dm.34221 SMR:Q7KWG3 STRING:Q7KWG3
EnsemblMetazoa:FBtr0089610 EnsemblMetazoa:FBtr0089612
GeneID:2768883 GeneID:2768886 KEGG:dme:Dmel_CG33497
KEGG:dme:Dmel_CG33499 UCSC:CG33497-RA CTD:2768883 CTD:2768886
FlyBase:FBgn0053497 FlyBase:FBgn0053499 InParanoid:Q7KWG3
NextBio:848456 Uniprot:Q7KWG3
Length = 543
Score = 1187 (422.9 bits), Expect = 1.2e-120, P = 1.2e-120
Identities = 208/346 (60%), Positives = 269/346 (77%)
Query: 44 DEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWN 103
DE+S +LS R F+DE+WSKNR +T MDWST PEL++ SYH N+E+PNEPDGV ++WN
Sbjct: 172 DERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPELVVGSYHNNEESPNEPDGVVMVWN 231
Query: 104 XXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSV 163
CQS V+S CFAKFNP LILGGTYSGQIVLWD RVQK+TP+ RTPLS
Sbjct: 232 TKFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQIVLWDNRVQKRTPIQRTPLSA 291
Query: 164 MAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVL 223
AHTHPV+C+ ++GTQNAHN+ISIS+DG+LCSWSL+MLS PQ+T +LQ +Q+K +A+
Sbjct: 292 AAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQ--QRQSKAIAIT 349
Query: 224 SLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSH 283
S+AFP N++N+ V+G EDG VYSA RHG ++G E YE H GP+ G+S+H Q DF H
Sbjct: 350 SMAFPANEINSVVMGSEDGYVYSASRHGLRSGVNEVYERHLGPITGISTHYNQLSPDFGH 409
Query: 284 LYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLN 343
L+LTSS DW++KLW++K+ KP++SF + DYVMDV WSP++PALFA V+ +GR+DLWNLN
Sbjct: 410 LFLTSSIDWTIKLWSLKDTKPLYSFEDNSDYVMDVAWSPVHPALFAAVDGSGRLDLWNLN 469
Query: 344 LDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
DTEVP S +V GAPAL+RV+WTP+G +C+GDE G + ++DV E
Sbjct: 470 QDTEVPTASIVVAGAPALNRVSWTPSGLHVCIGDEAGKLYVYDVAE 515
>FB|FBgn0053499 [details] [associations]
symbol:Sdic4 "Sperm-specific dynein intermediate chain 4"
species:7227 "Drosophila melanogaster" [GO:0005868 "cytoplasmic
dynein complex" evidence=IEA] [GO:0005858 "axonemal dynein complex"
evidence=ISS] [GO:0003777 "microtubule motor activity"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025956 Pfam:PF00400 Pfam:PF11540
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10
SUPFAM:SSF50978 EMBL:AE014298 GO:GO:0007018
GeneTree:ENSGT00690000101848 KO:K10415 GO:GO:0005868
OrthoDB:EOG4WWQ0J OMA:NQSSPDF RefSeq:NP_996516.1 RefSeq:NP_996519.1
UniGene:Dm.33740 UniGene:Dm.34221 SMR:Q7KWG3 STRING:Q7KWG3
EnsemblMetazoa:FBtr0089610 EnsemblMetazoa:FBtr0089612
GeneID:2768883 GeneID:2768886 KEGG:dme:Dmel_CG33497
KEGG:dme:Dmel_CG33499 UCSC:CG33497-RA CTD:2768883 CTD:2768886
FlyBase:FBgn0053497 FlyBase:FBgn0053499 InParanoid:Q7KWG3
NextBio:848456 Uniprot:Q7KWG3
Length = 543
Score = 1187 (422.9 bits), Expect = 1.2e-120, P = 1.2e-120
Identities = 208/346 (60%), Positives = 269/346 (77%)
Query: 44 DEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWN 103
DE+S +LS R F+DE+WSKNR +T MDWST PEL++ SYH N+E+PNEPDGV ++WN
Sbjct: 172 DERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPELVVGSYHNNEESPNEPDGVVMVWN 231
Query: 104 XXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSV 163
CQS V+S CFAKFNP LILGGTYSGQIVLWD RVQK+TP+ RTPLS
Sbjct: 232 TKFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQIVLWDNRVQKRTPIQRTPLSA 291
Query: 164 MAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVL 223
AHTHPV+C+ ++GTQNAHN+ISIS+DG+LCSWSL+MLS PQ+T +LQ +Q+K +A+
Sbjct: 292 AAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQ--QRQSKAIAIT 349
Query: 224 SLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSH 283
S+AFP N++N+ V+G EDG VYSA RHG ++G E YE H GP+ G+S+H Q DF H
Sbjct: 350 SMAFPANEINSVVMGSEDGYVYSASRHGLRSGVNEVYERHLGPITGISTHYNQLSPDFGH 409
Query: 284 LYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLN 343
L+LTSS DW++KLW++K+ KP++SF + DYVMDV WSP++PALFA V+ +GR+DLWNLN
Sbjct: 410 LFLTSSIDWTIKLWSLKDTKPLYSFEDNSDYVMDVAWSPVHPALFAAVDGSGRLDLWNLN 469
Query: 344 LDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
DTEVP S +V GAPAL+RV+WTP+G +C+GDE G + ++DV E
Sbjct: 470 QDTEVPTASIVVAGAPALNRVSWTPSGLHVCIGDEAGKLYVYDVAE 515
>UNIPROTKB|E1C7N2 [details] [associations]
symbol:DYNC1I1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005868 "cytoplasmic dynein complex"
evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0031982 "vesicle" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025956 Pfam:PF00400 Pfam:PF11540 PROSITE:PS50294
SMART:SM00320 GO:GO:0000776 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0000922 GO:GO:0031982 GO:GO:0007018
GeneTree:ENSGT00690000101848 OMA:SLHFLTW GO:GO:0005868
EMBL:AADN02000732 EMBL:AADN02000733 EMBL:AADN02000734
IPI:IPI00580379 Ensembl:ENSGALT00000015824 Uniprot:E1C7N2
Length = 617
Score = 1185 (422.2 bits), Expect = 2.0e-120, P = 2.0e-120
Identities = 212/379 (55%), Positives = 282/379 (74%)
Query: 14 TLHGLQADWNEEGDPGLPQLPQDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDW 73
T+ ++ E+ D +D++ + GD ++ LSF RQF+DE WSK+R VT MDW
Sbjct: 209 TIRVIERALAEDSDIFFDYSGRDVE-EKDGDVQAGANLSFNRQFYDEHWSKHRVVTCMDW 267
Query: 74 STQHPELLLASYHRNKEAPNEPDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYL 133
S Q+PEL++ASY+ N++AP+EPDGV L+WN CQS V+S CFA+F+P L
Sbjct: 268 SLQYPELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNL 327
Query: 134 ILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRL 193
++GGTYSGQIVLWD R ++TPV RTPLS AHTHPV+C++V+GTQNAHNLI++S DG++
Sbjct: 328 VVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLITVSTDGKM 387
Query: 194 CSWSLEMLSSPQETRDLQYNNKQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNK 253
CSWSL+MLS+PQE+ +L YN ++K +AV +AFP DVNNFVVG E+G VY+ACRHG+K
Sbjct: 388 CSWSLDMLSTPQESMELVYN--KSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSK 445
Query: 254 AGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRD 313
AG E +EGH+GPV G++ H A G IDFSHL++TSS+DW+VKLW K NKP++SF + D
Sbjct: 446 AGIGEIFEGHQGPVTGINCHMAVGSIDFSHLFVTSSFDWTVKLWTTKHNKPLYSFEDNAD 505
Query: 314 YVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQL 373
YV DV WSP++PALFA V+ GR+DLWNLN DTEVP S +EGA AL+RV W G ++
Sbjct: 506 YVYDVMWSPVHPALFACVDGMGRLDLWNLNNDTEVPTASVTIEGASALNRVRWAQAGKEV 565
Query: 374 CVGDEKGAITMFDVGEVGI 392
VGD +G I ++DVGE+ +
Sbjct: 566 AVGDSEGRIWIYDVGELAV 584
>UNIPROTKB|Q29RQ3 [details] [associations]
symbol:DYNC1I1 "Cytoplasmic dynein 1 intermediate chain 1"
species:9913 "Bos taurus" [GO:0031982 "vesicle" evidence=ISS]
[GO:0005868 "cytoplasmic dynein complex" evidence=IDA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0000777 "condensed chromosome
kinetochore" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0003774 "motor
activity" evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025956 Pfam:PF00400 Pfam:PF11540
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0006810 GO:GO:0000922
GO:GO:0005874 GO:GO:0031982 GO:GO:0007018 GO:GO:0003774
GO:GO:0000777 EMBL:BC114074 IPI:IPI00728694 RefSeq:NP_001039981.1
UniGene:Bt.3699 ProteinModelPortal:Q29RQ3 SMR:Q29RQ3 STRING:Q29RQ3
Ensembl:ENSBTAT00000020774 GeneID:613724 KEGG:bta:613724 CTD:1780
eggNOG:NOG308180 GeneTree:ENSGT00690000101848 HOGENOM:HOG000116383
HOVERGEN:HBG004083 InParanoid:Q29RQ3 KO:K10415 OMA:SLHFLTW
OrthoDB:EOG4RBQJ5 NextBio:20898728 GO:GO:0005868 Uniprot:Q29RQ3
Length = 608
Score = 1185 (422.2 bits), Expect = 2.0e-120, P = 2.0e-120
Identities = 212/379 (55%), Positives = 282/379 (74%)
Query: 14 TLHGLQADWNEEGDPGLPQLPQDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDW 73
T+ ++ E+ D ++L+ + GD ++ LSF RQF+DE WSK+R VT MDW
Sbjct: 200 TIRVIERALAEDSDIFFDYSGRELE-EKDGDVQAGANLSFNRQFYDEHWSKHRVVTCMDW 258
Query: 74 STQHPELLLASYHRNKEAPNEPDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYL 133
S Q+PEL++ASY+ N++AP+EPDGV L+WN CQS V+S CFA+F+P L
Sbjct: 259 SLQYPELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNL 318
Query: 134 ILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRL 193
++GGTYSGQIVLWD R ++TPV RTPLS AHTHPV+C++V+GTQNAHNLI++S DG++
Sbjct: 319 VVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLITVSTDGKM 378
Query: 194 CSWSLEMLSSPQETRDLQYNNKQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNK 253
CSWSL+MLS+PQE+ +L YN ++K +AV +AFP DVNNFVVG E+G VY+ACRHG+K
Sbjct: 379 CSWSLDMLSTPQESMELVYN--KSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSK 436
Query: 254 AGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRD 313
AG E +EGH+GPV G++ H A G IDFSHL++TSS+DW+VKLW K NKP++SF + D
Sbjct: 437 AGIGEVFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTVKLWTTKHNKPLYSFEDNAD 496
Query: 314 YVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQL 373
YV DV WSP++PALFA V+ GR+DLWNLN DTEVP S +EGA AL+RV W G ++
Sbjct: 497 YVYDVMWSPVHPALFACVDGMGRLDLWNLNNDTEVPTASVAIEGASALNRVRWAQGGKEV 556
Query: 374 CVGDEKGAITMFDVGEVGI 392
VGD +G I ++DVGE+ +
Sbjct: 557 AVGDSEGRIWIYDVGELAV 575
>UNIPROTKB|F5H050 [details] [associations]
symbol:DYNC1I1 "Cytoplasmic dynein 1 intermediate chain 1"
species:9606 "Homo sapiens" [GO:0005868 "cytoplasmic dynein
complex" evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025956 Pfam:PF00400 Pfam:PF11540
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0007018 EMBL:AC002540 GO:GO:0005868 EMBL:AC022261
EMBL:AC091779 EMBL:AC002452 HGNC:HGNC:2963 IPI:IPI01012537
ProteinModelPortal:F5H050 SMR:F5H050 Ensembl:ENST00000537881
ArrayExpress:F5H050 Bgee:F5H050 Uniprot:F5H050
Length = 602
Score = 1185 (422.2 bits), Expect = 2.0e-120, P = 2.0e-120
Identities = 215/382 (56%), Positives = 284/382 (74%)
Query: 14 TLHGLQADWNEEGDPGLPQLPQDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDW 73
T+ ++ E+ D ++L+ + GD ++ LSF RQF+DE WSK+R VT MDW
Sbjct: 200 TIRVIERALAEDSDIFFDYSGRELE-EKDGDVQAGANLSFNRQFYDEHWSKHRVVTCMDW 258
Query: 74 STQHPELLLASYHRNKEAPNEPDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYL 133
S Q+PEL++ASY+ N++AP+EPDGV L+WN CQS V+S CFA+F+P L
Sbjct: 259 SLQYPELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNL 318
Query: 134 ILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRL 193
++GGTYSGQIVLWD R ++TPV RTPLS AHTHPV+C++V+GTQNAHNLI++S DG++
Sbjct: 319 VVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLITVSTDGKM 378
Query: 194 CSWSLEMLSSPQETRDLQYNNKQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNK 253
CSWSL+MLS+PQE+ +L YN ++K +AV +AFP DVNNFVVG E+G VY+ACRHG+K
Sbjct: 379 CSWSLDMLSTPQESMELVYN--KSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSK 436
Query: 254 AGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRD 313
AG E +EGH+GPV G++ H A G IDFSHL++TSS+DW+VKLW K NKP++SF + D
Sbjct: 437 AGIGEVFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTVKLWTTKHNKPLYSFEDNAD 496
Query: 314 YVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQL 373
YV DV WSP++PALFA V+ GR+DLWNLN DTEVP S +EGA AL+RV W G ++
Sbjct: 497 YVYDVMWSPVHPALFACVDGMGRLDLWNLNNDTEVPTASVAIEGASALNRVRWAQAGKEV 556
Query: 374 CVGDEKGAITMFDVGEVGIACL 395
VGD +G I ++DVGE G+A L
Sbjct: 557 AVGDSEGRIWVYDVGE-GLAML 577
>MGI|MGI:107750 [details] [associations]
symbol:Dync1i2 "dynein cytoplasmic 1 intermediate chain 2"
species:10090 "Mus musculus" [GO:0003774 "motor activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005868 "cytoplasmic dynein complex" evidence=IEA] [GO:0005874
"microtubule" evidence=ISO] [GO:0006810 "transport" evidence=IEA]
[GO:0007018 "microtubule-based movement" evidence=IEA] [GO:0030286
"dynein complex" evidence=IEA] [GO:0031982 "vesicle" evidence=ISO]
[GO:0032403 "protein complex binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025956 Pfam:PF00400 Pfam:PF11540 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:107750 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0006810
GO:GO:0005874 GO:GO:0031982 GO:GO:0007018 GO:GO:0003774
eggNOG:NOG308180 GeneTree:ENSGT00690000101848 HOVERGEN:HBG004083
KO:K10415 OrthoDB:EOG4RBQJ5 GO:GO:0005868 CTD:1781 EMBL:AF063231
EMBL:AK088015 EMBL:AK164437 EMBL:AK168730 IPI:IPI00131086
RefSeq:NP_001185805.1 RefSeq:NP_001185806.1 RefSeq:NP_001185807.1
RefSeq:NP_034194.1 UniGene:Mm.249479 ProteinModelPortal:O88487
SMR:O88487 IntAct:O88487 STRING:O88487 PhosphoSite:O88487
REPRODUCTION-2DPAGE:O88487 PaxDb:O88487 PRIDE:O88487
Ensembl:ENSMUST00000081710 Ensembl:ENSMUST00000112138 GeneID:13427
KEGG:mmu:13427 NextBio:283847 Bgee:O88487 CleanEx:MM_DYNC1I2
Genevestigator:O88487 GermOnline:ENSMUSG00000027012 Uniprot:O88487
Length = 612
Score = 1184 (421.8 bits), Expect = 2.5e-120, P = 2.5e-120
Identities = 213/355 (60%), Positives = 275/355 (77%)
Query: 35 QDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNE 94
+DL+ D G+ ++ KLS RQFFDE+WSK+R V+ +DWS+Q+PELL+ASY+ N+EAP+E
Sbjct: 224 RDLE-DKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEEAPHE 282
Query: 95 PDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKT 154
PDGV L+WN CQS V+S FAKF+P L++GGTYSGQIVLWD R K+T
Sbjct: 283 PDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRT 342
Query: 155 PVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNN 214
PV RTPLS AHTHPV+C++V+GTQNAHNLISIS DG++CSWSL+MLS PQ++ +L +
Sbjct: 343 PVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVH-- 400
Query: 215 KQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHR 274
KQ+K +AV S++FP DVNNFVVG E+G+VY+ACRHG+KAG E +EGH+GP+ G+ H
Sbjct: 401 KQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHA 460
Query: 275 AQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVA 334
A G +DFSHL++TSS+DW+VKLW K NKP++SF + DYV DV WSP +PALFA V+
Sbjct: 461 AVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGM 520
Query: 335 GRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
GR+DLWNLN DTEVP S VEG PAL+RV WT +G ++ VGD +G I ++DVGE
Sbjct: 521 GRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGE 575
>UNIPROTKB|D4A9K8 [details] [associations]
symbol:Dync1i1 "Cytoplasmic dynein 1 intermediate chain 1"
species:10116 "Rattus norvegicus" [GO:0005868 "cytoplasmic dynein
complex" evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025956 Pfam:PF00400 Pfam:PF11540
PROSITE:PS50294 SMART:SM00320 RGD:2512 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0007018 GO:GO:0005868 IPI:IPI00957324
EMBL:AC091353 EMBL:AC095999 EMBL:AC099174 ProteinModelPortal:D4A9K8
Ensembl:ENSRNOT00000039981 ArrayExpress:D4A9K8 Uniprot:D4A9K8
Length = 622
Score = 1184 (421.8 bits), Expect = 2.5e-120, P = 2.5e-120
Identities = 212/379 (55%), Positives = 281/379 (74%)
Query: 14 TLHGLQADWNEEGDPGLPQLPQDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDW 73
T+ ++ E+ D ++L+ + GD ++ LSF RQF+DE WSK+R VT MDW
Sbjct: 214 TIRVIERALAEDSDIFFDYSGRELE-EKDGDVQAGANLSFNRQFYDEHWSKHRVVTCMDW 272
Query: 74 STQHPELLLASYHRNKEAPNEPDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYL 133
S Q+PEL++ASY N++AP+EPDGV L+WN CQS V+S CFA+F+P L
Sbjct: 273 SLQYPELMVASYSNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNL 332
Query: 134 ILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRL 193
++GGTYSGQIVLWD R ++TPV RTPLS AHTHPV+C++V+GTQNAHNLI++S DG++
Sbjct: 333 VVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLITVSTDGKM 392
Query: 194 CSWSLEMLSSPQETRDLQYNNKQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNK 253
CSWSL+MLS+PQE+ +L YN ++K +AV +AFP DVNNFVVG E+G VY+ACRHG+K
Sbjct: 393 CSWSLDMLSTPQESMELVYN--KSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSK 450
Query: 254 AGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRD 313
AG E +EGH+GPV G++ H A G IDFSHL++TSS+DW+VKLW K NKP++SF + D
Sbjct: 451 AGIGEVFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTVKLWTTKHNKPLYSFEDNAD 510
Query: 314 YVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQL 373
YV DV WSP++PALFA V+ GR+DLWNLN DTEVP S +EGA AL+RV W G ++
Sbjct: 511 YVYDVMWSPVHPALFACVDGMGRLDLWNLNSDTEVPTASVAIEGASALNRVRWAQGGKEV 570
Query: 374 CVGDEKGAITMFDVGEVGI 392
VGD +G I ++DVGE+ +
Sbjct: 571 AVGDSEGRIWIYDVGELAV 589
>UNIPROTKB|G3V9V3 [details] [associations]
symbol:Dync1i2 "Cytoplasmic dynein 1 intermediate chain 2"
species:10116 "Rattus norvegicus" [GO:0005868 "cytoplasmic dynein
complex" evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025956 Pfam:PF00400 Pfam:PF11540
PROSITE:PS50294 SMART:SM00320 RGD:620174 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0007018 EMBL:CH473949
GeneTree:ENSGT00690000101848 KO:K10415 GO:GO:0005868 CTD:1781
UniGene:Rn.11014 RefSeq:NP_446332.2 ProteinModelPortal:G3V9V3
Ensembl:ENSRNOT00000067729 GeneID:116659 KEGG:rno:116659
Uniprot:G3V9V3
Length = 638
Score = 1184 (421.8 bits), Expect = 2.5e-120, P = 2.5e-120
Identities = 213/355 (60%), Positives = 275/355 (77%)
Query: 35 QDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNE 94
+DL+ D G+ ++ KLS RQFFDE+WSK+R V+ +DWS+Q+PELL+ASY+ N+EAP+E
Sbjct: 250 RDLE-DKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEEAPHE 308
Query: 95 PDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKT 154
PDGV L+WN CQS V+S FAKF+P L++GGTYSGQIVLWD R K+T
Sbjct: 309 PDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRT 368
Query: 155 PVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNN 214
PV RTPLS AHTHPV+C++V+GTQNAHNLISIS DG++CSWSL+MLS PQ++ +L +
Sbjct: 369 PVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVH-- 426
Query: 215 KQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHR 274
KQ+K +AV S++FP DVNNFVVG E+G+VY+ACRHG+KAG E +EGH+GP+ G+ H
Sbjct: 427 KQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHA 486
Query: 275 AQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVA 334
A G +DFSHL++TSS+DW+VKLW K NKP++SF + DYV DV WSP +PALFA V+
Sbjct: 487 AVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGM 546
Query: 335 GRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
GR+DLWNLN DTEVP S VEG PAL+RV WT +G ++ VGD +G I ++DVGE
Sbjct: 547 GRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGE 601
>UNIPROTKB|Q6AZ35 [details] [associations]
symbol:Dync1i2 "Cytoplasmic dynein 1 intermediate chain 2"
species:10116 "Rattus norvegicus" [GO:0005868 "cytoplasmic dynein
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025956 Pfam:PF00400 Pfam:PF11540
PROSITE:PS50294 SMART:SM00320 RGD:620174 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0007018 EMBL:CH473949
GeneTree:ENSGT00690000101848 HOGENOM:HOG000116383
HOVERGEN:HBG004083 KO:K10415 GO:GO:0005868 CTD:1781 IPI:IPI00464798
UniGene:Rn.11014 RefSeq:NP_446332.2 GeneID:116659 KEGG:rno:116659
EMBL:BC078764 RefSeq:NP_001257553.1 RefSeq:NP_001257554.1
SMR:Q6AZ35 STRING:Q6AZ35 Ensembl:ENSRNOT00000047243
InParanoid:Q6AZ35 Genevestigator:Q6AZ35 Uniprot:Q6AZ35
Length = 632
Score = 1184 (421.8 bits), Expect = 2.5e-120, P = 2.5e-120
Identities = 213/355 (60%), Positives = 275/355 (77%)
Query: 35 QDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNE 94
+DL+ D G+ ++ KLS RQFFDE+WSK+R V+ +DWS+Q+PELL+ASY+ N+EAP+E
Sbjct: 244 RDLE-DKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEEAPHE 302
Query: 95 PDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKT 154
PDGV L+WN CQS V+S FAKF+P L++GGTYSGQIVLWD R K+T
Sbjct: 303 PDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRT 362
Query: 155 PVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNN 214
PV RTPLS AHTHPV+C++V+GTQNAHNLISIS DG++CSWSL+MLS PQ++ +L +
Sbjct: 363 PVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVH-- 420
Query: 215 KQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHR 274
KQ+K +AV S++FP DVNNFVVG E+G+VY+ACRHG+KAG E +EGH+GP+ G+ H
Sbjct: 421 KQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHA 480
Query: 275 AQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVA 334
A G +DFSHL++TSS+DW+VKLW K NKP++SF + DYV DV WSP +PALFA V+
Sbjct: 481 AVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGM 540
Query: 335 GRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
GR+DLWNLN DTEVP S VEG PAL+RV WT +G ++ VGD +G I ++DVGE
Sbjct: 541 GRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGE 595
>UNIPROTKB|G5E9K1 [details] [associations]
symbol:DYNC1I1 "Dynein, cytoplasmic 1, intermediate chain
1, isoform CRA_c" species:9606 "Homo sapiens" [GO:0005868
"cytoplasmic dynein complex" evidence=IEA] [GO:0007018
"microtubule-based movement" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025956
Pfam:PF00400 Pfam:PF11540 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:CH471091 GO:GO:0007018
EMBL:AC002540 GO:GO:0005868 EMBL:AC022261 EMBL:AC091779
EMBL:AC002452 UniGene:Hs.440364 HGNC:HGNC:2963
ProteinModelPortal:G5E9K1 SMR:G5E9K1 PRIDE:G5E9K1
Ensembl:ENST00000437599 ArrayExpress:G5E9K1 Bgee:G5E9K1
Uniprot:G5E9K1
Length = 625
Score = 1183 (421.5 bits), Expect = 3.2e-120, P = 3.2e-120
Identities = 212/379 (55%), Positives = 282/379 (74%)
Query: 14 TLHGLQADWNEEGDPGLPQLPQDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDW 73
T+ ++ E+ D ++L+ + GD ++ LSF RQF+DE WSK+R VT MDW
Sbjct: 217 TIRVIERALAEDSDIFFDYSGRELE-EKDGDVQAGANLSFNRQFYDEHWSKHRVVTCMDW 275
Query: 74 STQHPELLLASYHRNKEAPNEPDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYL 133
S Q+PEL++ASY+ N++AP+EPDGV L+WN CQS V+S CFA+F+P L
Sbjct: 276 SLQYPELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNL 335
Query: 134 ILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRL 193
++GGTYSGQIVLWD R ++TPV RTPLS AHTHPV+C++V+GTQNAHNLI++S DG++
Sbjct: 336 VVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLITVSTDGKM 395
Query: 194 CSWSLEMLSSPQETRDLQYNNKQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNK 253
CSWSL+MLS+PQE+ +L YN ++K +AV +AFP DVNNFVVG E+G VY+ACRHG+K
Sbjct: 396 CSWSLDMLSTPQESMELVYN--KSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSK 453
Query: 254 AGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRD 313
AG E +EGH+GPV G++ H A G IDFSHL++TSS+DW+VKLW K NKP++SF + D
Sbjct: 454 AGIGEVFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTVKLWTTKHNKPLYSFEDNAD 513
Query: 314 YVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQL 373
YV DV WSP++PALFA V+ GR+DLWNLN DTEVP S +EGA AL+RV W G ++
Sbjct: 514 YVYDVMWSPVHPALFACVDGMGRLDLWNLNNDTEVPTASVAIEGASALNRVRWAQAGKEV 573
Query: 374 CVGDEKGAITMFDVGEVGI 392
VGD +G I ++DVGE+ +
Sbjct: 574 AVGDSEGRIWVYDVGELAV 592
>RGD|2512 [details] [associations]
symbol:Dync1i1 "dynein cytoplasmic 1 intermediate chain 1"
species:10116 "Rattus norvegicus" [GO:0000776 "kinetochore"
evidence=IEA;ISO;ISS] [GO:0000777 "condensed chromosome kinetochore"
evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA;ISO;ISS]
[GO:0003777 "microtubule motor activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005868 "cytoplasmic dynein
complex" evidence=IEA;ISS;IDA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0007018 "microtubule-based movement" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031982 "vesicle"
evidence=IEA;ISO;ISS] [GO:0047496 "vesicle transport along
microtubule" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025956 Pfam:PF00400 Pfam:PF11540
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 RGD:2512 GO:GO:0048471
GO:GO:0000776 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0008017 GO:GO:0000922 GO:GO:0005874 GO:GO:0031982 GO:GO:0003777
GO:GO:0000777 GO:GO:0047496 CTD:1780 eggNOG:NOG308180
HOGENOM:HOG000116383 HOVERGEN:HBG004083 KO:K10415 OrthoDB:EOG4RBQJ5
GO:GO:0005868 EMBL:X66845 IPI:IPI00205748 IPI:IPI00957324
IPI:IPI00968479 PIR:A43423 RefSeq:NP_062107.1 UniGene:Rn.11273
ProteinModelPortal:Q63100 SMR:Q63100 STRING:Q63100 PhosphoSite:Q63100
PRIDE:Q63100 GeneID:29564 KEGG:rno:29564 UCSC:RGD:2512
InParanoid:Q63100 NextBio:609628 ArrayExpress:Q63100
Genevestigator:Q63100 GermOnline:ENSRNOG00000009700 Uniprot:Q63100
Length = 643
Score = 1182 (421.1 bits), Expect = 4.1e-120, P = 4.1e-120
Identities = 212/379 (55%), Positives = 281/379 (74%)
Query: 14 TLHGLQADWNEEGDPGLPQLPQDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDW 73
T+ ++ E+ D ++L+ + GD ++ LSF RQF+DE WSK+R VT MDW
Sbjct: 235 TIRVIERALAEDSDIFFDYSGRELE-EKDGDVQAGANLSFNRQFYDEHWSKHRVVTCMDW 293
Query: 74 STQHPELLLASYHRNKEAPNEPDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYL 133
S Q+PEL++ASY N++AP+EPDGV L+WN CQS V+S CFA+F+P L
Sbjct: 294 SLQYPELMVASYSNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNL 353
Query: 134 ILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRL 193
++GGTYSGQIVLWD R ++TPV RTPLS AHTHPV+C++V+GTQNAHNLI++S DG++
Sbjct: 354 VVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLITVSTDGKM 413
Query: 194 CSWSLEMLSSPQETRDLQYNNKQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNK 253
CSWSL+MLS+PQE+ +L YN ++K +AV +AFP DVNNFVVG E+G VY+ACRHG+K
Sbjct: 414 CSWSLDMLSTPQESMELVYN--KSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSK 471
Query: 254 AGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRD 313
AG E +EGH+GPV G++ H A G IDFSHL++TSS+DW+VKLW K NKP++SF + D
Sbjct: 472 AGIGEVFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTVKLWTTKHNKPLYSFEDNAD 531
Query: 314 YVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQL 373
YV DV WSP++PALFA V+ GR+DLWNLN DTEVP S +EGA AL+RV W G ++
Sbjct: 532 YVYDVMWSPVHPALFACVDGMGRLDLWNLNSDTEVPTASVAIEGAYALNRVRWAQGGKEV 591
Query: 374 CVGDEKGAITMFDVGEVGI 392
VGD +G I ++DVGE+ +
Sbjct: 592 AVGDSEGRIWIYDVGELAV 610
>UNIPROTKB|F1N7H7 [details] [associations]
symbol:DYNC1I2 "Cytoplasmic dynein 1 intermediate chain 2"
species:9913 "Bos taurus" [GO:0031982 "vesicle" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0005868 "cytoplasmic dynein complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025956 Pfam:PF00400 Pfam:PF11540
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005874 GO:GO:0031982
GO:GO:0007018 GeneTree:ENSGT00690000101848 GO:GO:0005868
IPI:IPI00839366 OMA:WAHSGRE EMBL:DAAA02004233 EMBL:DAAA02004234
EMBL:DAAA02004235 Ensembl:ENSBTAT00000003429 ArrayExpress:F1N7H7
Uniprot:F1N7H7
Length = 612
Score = 1181 (420.8 bits), Expect = 5.2e-120, P = 5.2e-120
Identities = 212/355 (59%), Positives = 275/355 (77%)
Query: 35 QDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNE 94
+DL+ D G+ ++ KLS RQFFDE+WSK+R V+ +DWS+Q+PELL+ASY+ N++AP+E
Sbjct: 224 RDLE-DKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHE 282
Query: 95 PDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKT 154
PDGV L+WN CQS V+S FAKF+P L++GGTYSGQIVLWD R K+T
Sbjct: 283 PDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRT 342
Query: 155 PVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNN 214
PV RTPLS AHTHPV+C++V+GTQNAHNLISIS DG++CSWSL+MLS PQ++ +L +
Sbjct: 343 PVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVH-- 400
Query: 215 KQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHR 274
KQ+K +AV S++FP DVNNFVVG E+G+VY+ACRHG+KAG E +EGH+GP+ G+ H
Sbjct: 401 KQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHS 460
Query: 275 AQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVA 334
A G +DFSHL++TSS+DW+VKLW K NKP++SF + DYV DV WSP +PALFA V+
Sbjct: 461 AVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGM 520
Query: 335 GRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
GR+DLWNLN DTEVP S VEG PAL+RV WT +G ++ VGD +G I ++DVGE
Sbjct: 521 GRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGE 575
>UNIPROTKB|Q0III3 [details] [associations]
symbol:DYNC1I2 "Cytoplasmic dynein 1 intermediate chain 2"
species:9913 "Bos taurus" [GO:0031982 "vesicle" evidence=ISS]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
[GO:0007018 "microtubule-based movement" evidence=IEA] [GO:0005868
"cytoplasmic dynein complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025956
Pfam:PF00400 Pfam:PF11540 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0006810 GO:GO:0005874 GO:GO:0031982 GO:GO:0007018
GO:GO:0003774 eggNOG:NOG308180 HOGENOM:HOG000116383
HOVERGEN:HBG004083 KO:K10415 GO:GO:0005868 EMBL:BC122627
IPI:IPI00839366 RefSeq:NP_001069351.1 UniGene:Bt.3906
ProteinModelPortal:Q0III3 SMR:Q0III3 STRING:Q0III3 PRIDE:Q0III3
GeneID:526329 KEGG:bta:526329 CTD:1781 NextBio:20874347
Uniprot:Q0III3
Length = 612
Score = 1181 (420.8 bits), Expect = 5.2e-120, P = 5.2e-120
Identities = 212/355 (59%), Positives = 275/355 (77%)
Query: 35 QDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNE 94
+DL+ D G+ ++ KLS RQFFDE+WSK+R V+ +DWS+Q+PELL+ASY+ N++AP+E
Sbjct: 224 RDLE-DKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHE 282
Query: 95 PDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKT 154
PDGV L+WN CQS V+S FAKF+P L++GGTYSGQIVLWD R K+T
Sbjct: 283 PDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRT 342
Query: 155 PVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNN 214
PV RTPLS AHTHPV+C++V+GTQNAHNLISIS DG++CSWSL+MLS PQ++ +L +
Sbjct: 343 PVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVH-- 400
Query: 215 KQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHR 274
KQ+K +AV S++FP DVNNFVVG E+G+VY+ACRHG+KAG E +EGH+GP+ G+ H
Sbjct: 401 KQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHS 460
Query: 275 AQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVA 334
A G +DFSHL++TSS+DW+VKLW K NKP++SF + DYV DV WSP +PALFA V+
Sbjct: 461 AVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGM 520
Query: 335 GRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
GR+DLWNLN DTEVP S VEG PAL+RV WT +G ++ VGD +G I ++DVGE
Sbjct: 521 GRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGE 575
>UNIPROTKB|E2RM92 [details] [associations]
symbol:DYNC1I2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0031982 "vesicle" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0005868 "cytoplasmic dynein complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025956 Pfam:PF00400 Pfam:PF11540
PROSITE:PS50294 SMART:SM00320 GO:GO:0005813 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005874 GO:GO:0031982 GO:GO:0007018
GeneTree:ENSGT00690000101848 KO:K10415 GO:GO:0005868 CTD:1781
OMA:WAHSGRE EMBL:AAEX03017756 RefSeq:XP_859757.1
ProteinModelPortal:E2RM92 Ensembl:ENSCAFT00000020210 GeneID:478797
KEGG:cfa:478797 Uniprot:E2RM92
Length = 612
Score = 1181 (420.8 bits), Expect = 5.2e-120, P = 5.2e-120
Identities = 212/355 (59%), Positives = 275/355 (77%)
Query: 35 QDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNE 94
+DL+ D G+ ++ KLS RQFFDE+WSK+R V+ +DWS+Q+PELL+ASY+ N++AP+E
Sbjct: 224 RDLE-DKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHE 282
Query: 95 PDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKT 154
PDGV L+WN CQS V+S FAKF+P L++GGTYSGQIVLWD R K+T
Sbjct: 283 PDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRT 342
Query: 155 PVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNN 214
PV RTPLS AHTHPV+C++V+GTQNAHNLISIS DG++CSWSL+MLS PQ++ +L +
Sbjct: 343 PVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVH-- 400
Query: 215 KQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHR 274
KQ+K +AV S++FP DVNNFVVG E+G+VY+ACRHG+KAG E +EGH+GP+ G+ H
Sbjct: 401 KQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHA 460
Query: 275 AQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVA 334
A G +DFSHL++TSS+DW+VKLW K NKP++SF + DYV DV WSP +PALFA V+
Sbjct: 461 AVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGM 520
Query: 335 GRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
GR+DLWNLN DTEVP S VEG PAL+RV WT +G ++ VGD +G I ++DVGE
Sbjct: 521 GRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGE 575
>UNIPROTKB|E2RMA7 [details] [associations]
symbol:DYNC1I2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0005868 "cytoplasmic dynein complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025956 Pfam:PF00400 Pfam:PF11540
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0007018 GeneTree:ENSGT00690000101848 GO:GO:0005868
EMBL:AAEX03017756 Ensembl:ENSCAFT00000020196 Uniprot:E2RMA7
Length = 602
Score = 1181 (420.8 bits), Expect = 5.2e-120, P = 5.2e-120
Identities = 212/355 (59%), Positives = 275/355 (77%)
Query: 35 QDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNE 94
+DL+ D G+ ++ KLS RQFFDE+WSK+R V+ +DWS+Q+PELL+ASY+ N++AP+E
Sbjct: 214 RDLE-DKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHE 272
Query: 95 PDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKT 154
PDGV L+WN CQS V+S FAKF+P L++GGTYSGQIVLWD R K+T
Sbjct: 273 PDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRT 332
Query: 155 PVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNN 214
PV RTPLS AHTHPV+C++V+GTQNAHNLISIS DG++CSWSL+MLS PQ++ +L +
Sbjct: 333 PVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVH-- 390
Query: 215 KQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHR 274
KQ+K +AV S++FP DVNNFVVG E+G+VY+ACRHG+KAG E +EGH+GP+ G+ H
Sbjct: 391 KQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHA 450
Query: 275 AQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVA 334
A G +DFSHL++TSS+DW+VKLW K NKP++SF + DYV DV WSP +PALFA V+
Sbjct: 451 AVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGM 510
Query: 335 GRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
GR+DLWNLN DTEVP S VEG PAL+RV WT +G ++ VGD +G I ++DVGE
Sbjct: 511 GRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGE 565
>UNIPROTKB|B7ZA04 [details] [associations]
symbol:DYNC1I2 "cDNA, FLJ79018, highly similar to
Cytoplasmic dynein 1 intermediate chain 2" species:9606 "Homo
sapiens" [GO:0005868 "cytoplasmic dynein complex" evidence=IEA]
[GO:0007018 "microtubule-based movement" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025956 Pfam:PF00400 Pfam:PF11540 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0007018
EMBL:AC068039 HOVERGEN:HBG004083 GO:GO:0005868 EMBL:AC064826
UniGene:Hs.546250 GeneID:1781 HGNC:HGNC:2964 ChiTaRS:DYNC1I2
EMBL:AK316119 IPI:IPI00915993 RefSeq:NP_001258715.1
RefSeq:NP_001258716.1 SMR:B7ZA04 STRING:B7ZA04
Ensembl:ENST00000358002 Ensembl:ENST00000410079 UCSC:uc010zds.1
Uniprot:B7ZA04
Length = 630
Score = 1181 (420.8 bits), Expect = 5.2e-120, P = 5.2e-120
Identities = 212/355 (59%), Positives = 275/355 (77%)
Query: 35 QDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNE 94
+DL+ D G+ ++ KLS RQFFDE+WSK+R V+ +DWS+Q+PELL+ASY+ N++AP+E
Sbjct: 242 RDLE-DKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHE 300
Query: 95 PDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKT 154
PDGV L+WN CQS V+S FAKF+P L++GGTYSGQIVLWD R K+T
Sbjct: 301 PDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRT 360
Query: 155 PVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNN 214
PV RTPLS AHTHPV+C++V+GTQNAHNLISIS DG++CSWSL+MLS PQ++ +L +
Sbjct: 361 PVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVH-- 418
Query: 215 KQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHR 274
KQ+K +AV S++FP DVNNFVVG E+G+VY+ACRHG+KAG E +EGH+GP+ G+ H
Sbjct: 419 KQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHA 478
Query: 275 AQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVA 334
A G +DFSHL++TSS+DW+VKLW K NKP++SF + DYV DV WSP +PALFA V+
Sbjct: 479 AVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALFACVDGM 538
Query: 335 GRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
GR+DLWNLN DTEVP S VEG PAL+RV WT +G ++ VGD +G I ++DVGE
Sbjct: 539 GRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGE 593
>UNIPROTKB|F8W8S0 [details] [associations]
symbol:DYNC1I2 "Cytoplasmic dynein 1 intermediate chain 2"
species:9606 "Homo sapiens" [GO:0005868 "cytoplasmic dynein
complex" evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025956 Pfam:PF00400 Pfam:PF11540
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0007018 EMBL:AC068039 GO:GO:0005868 EMBL:AC064826
HGNC:HGNC:2964 ChiTaRS:DYNC1I2 IPI:IPI01015321
ProteinModelPortal:F8W8S0 SMR:F8W8S0 PRIDE:F8W8S0
Ensembl:ENST00000534253 ArrayExpress:F8W8S0 Bgee:F8W8S0
Uniprot:F8W8S0
Length = 638
Score = 1181 (420.8 bits), Expect = 5.2e-120, P = 5.2e-120
Identities = 212/355 (59%), Positives = 275/355 (77%)
Query: 35 QDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNE 94
+DL+ D G+ ++ KLS RQFFDE+WSK+R V+ +DWS+Q+PELL+ASY+ N++AP+E
Sbjct: 250 RDLE-DKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHE 308
Query: 95 PDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKT 154
PDGV L+WN CQS V+S FAKF+P L++GGTYSGQIVLWD R K+T
Sbjct: 309 PDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRT 368
Query: 155 PVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNN 214
PV RTPLS AHTHPV+C++V+GTQNAHNLISIS DG++CSWSL+MLS PQ++ +L +
Sbjct: 369 PVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVH-- 426
Query: 215 KQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHR 274
KQ+K +AV S++FP DVNNFVVG E+G+VY+ACRHG+KAG E +EGH+GP+ G+ H
Sbjct: 427 KQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHA 486
Query: 275 AQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVA 334
A G +DFSHL++TSS+DW+VKLW K NKP++SF + DYV DV WSP +PALFA V+
Sbjct: 487 AVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALFACVDGM 546
Query: 335 GRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
GR+DLWNLN DTEVP S VEG PAL+RV WT +G ++ VGD +G I ++DVGE
Sbjct: 547 GRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGE 601
>UNIPROTKB|Q13409 [details] [associations]
symbol:DYNC1I2 "Cytoplasmic dynein 1 intermediate chain 2"
species:9606 "Homo sapiens" [GO:0005868 "cytoplasmic dynein
complex" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0007018
"microtubule-based movement" evidence=NAS] [GO:0003777 "microtubule
motor activity" evidence=NAS] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0005813 "centrosome" evidence=IDA] [GO:0031982 "vesicle"
evidence=IDA] [GO:0005874 "microtubule" evidence=IDA] [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0019886 "antigen processing and presentation of
exogenous peptide antigen via MHC class II" evidence=TAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025956 Pfam:PF00400 Pfam:PF11540 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0005813
Reactome:REACT_6900 Reactome:REACT_115566 GO:GO:0000086
GO:GO:0019048 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0019886 GO:GO:0006810 EMBL:CH471058 GO:GO:0005874
GO:GO:0031982 GO:GO:0003777 GO:GO:0007018 EMBL:AC068039
eggNOG:NOG308180 HOVERGEN:HBG004083 KO:K10415 OrthoDB:EOG4RBQJ5
GO:GO:0005868 CTD:1781 EMBL:AF134477 EMBL:AF250307 EMBL:AY037160
EMBL:BT007130 EMBL:AK055491 EMBL:AL137519 EMBL:BX537412
EMBL:AC064826 EMBL:BC091498 EMBL:BC109375 EMBL:BC015038 EMBL:U39575
IPI:IPI00216348 IPI:IPI00302712 IPI:IPI00744015 IPI:IPI00827813
IPI:IPI00827859 PIR:T46365 RefSeq:NP_001258714.1
RefSeq:NP_001258717.1 RefSeq:NP_001258718.1 RefSeq:NP_001258719.1
RefSeq:NP_001369.1 UniGene:Hs.546250 ProteinModelPortal:Q13409
SMR:Q13409 IntAct:Q13409 MINT:MINT-5004520 STRING:Q13409
PhosphoSite:Q13409 DMDM:23503058 REPRODUCTION-2DPAGE:IPI00827813
PaxDb:Q13409 PRIDE:Q13409 DNASU:1781 Ensembl:ENST00000263811
Ensembl:ENST00000340296 Ensembl:ENST00000397119
Ensembl:ENST00000409197 Ensembl:ENST00000409317
Ensembl:ENST00000409453 Ensembl:ENST00000409773
Ensembl:ENST00000508530 GeneID:1781 KEGG:hsa:1781 UCSC:uc002uha.1
UCSC:uc002uhb.1 UCSC:uc002uhc.3 UCSC:uc002uhd.1
GeneCards:GC02P172543 HGNC:HGNC:2964 HPA:CAB033836 MIM:603331
neXtProt:NX_Q13409 PharmGKB:PA27435 OMA:WAHSGRE ChiTaRS:DYNC1I2
GenomeRNAi:1781 NextBio:7247 ArrayExpress:Q13409 Bgee:Q13409
Genevestigator:Q13409 GermOnline:ENSG00000077380 Uniprot:Q13409
Length = 638
Score = 1181 (420.8 bits), Expect = 5.2e-120, P = 5.2e-120
Identities = 212/355 (59%), Positives = 275/355 (77%)
Query: 35 QDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNE 94
+DL+ D G+ ++ KLS RQFFDE+WSK+R V+ +DWS+Q+PELL+ASY+ N++AP+E
Sbjct: 250 RDLE-DKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHE 308
Query: 95 PDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKT 154
PDGV L+WN CQS V+S FAKF+P L++GGTYSGQIVLWD R K+T
Sbjct: 309 PDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRT 368
Query: 155 PVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNN 214
PV RTPLS AHTHPV+C++V+GTQNAHNLISIS DG++CSWSL+MLS PQ++ +L +
Sbjct: 369 PVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVH-- 426
Query: 215 KQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHR 274
KQ+K +AV S++FP DVNNFVVG E+G+VY+ACRHG+KAG E +EGH+GP+ G+ H
Sbjct: 427 KQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHA 486
Query: 275 AQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVA 334
A G +DFSHL++TSS+DW+VKLW K NKP++SF + DYV DV WSP +PALFA V+
Sbjct: 487 AVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALFACVDGM 546
Query: 335 GRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
GR+DLWNLN DTEVP S VEG PAL+RV WT +G ++ VGD +G I ++DVGE
Sbjct: 547 GRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGE 601
>UNIPROTKB|F1S087 [details] [associations]
symbol:DYNC1I2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031982 "vesicle" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0007018 "microtubule-based movement" evidence=IEA] [GO:0005868
"cytoplasmic dynein complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025956
Pfam:PF00400 Pfam:PF11540 PROSITE:PS50294 SMART:SM00320
GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005874
GO:GO:0031982 GO:GO:0007018 GeneTree:ENSGT00690000101848 KO:K10415
GO:GO:0005868 CTD:1781 OMA:WAHSGRE EMBL:CU928539 EMBL:AEMK01189537
RefSeq:NP_001230424.1 UniGene:Ssc.23632 UniGene:Ssc.78639
Ensembl:ENSSSCT00000017365 GeneID:100154566 KEGG:ssc:100154566
Uniprot:F1S087
Length = 612
Score = 1181 (420.8 bits), Expect = 5.2e-120, P = 5.2e-120
Identities = 212/355 (59%), Positives = 275/355 (77%)
Query: 35 QDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNE 94
+DL+ D G+ ++ KLS RQFFDE+WSK+R V+ +DWS+Q+PELL+ASY+ N++AP+E
Sbjct: 224 RDLE-DKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHE 282
Query: 95 PDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKT 154
PDGV L+WN CQS V+S FAKF+P L++GGTYSGQIVLWD R K+T
Sbjct: 283 PDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRT 342
Query: 155 PVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNN 214
PV RTPLS AHTHPV+C++V+GTQNAHNLISIS DG++CSWSL+MLS PQ++ +L +
Sbjct: 343 PVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVH-- 400
Query: 215 KQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHR 274
KQ+K +AV S++FP DVNNFVVG E+G+VY+ACRHG+KAG E +EGH+GP+ G+ H
Sbjct: 401 KQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHA 460
Query: 275 AQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVA 334
A G +DFSHL++TSS+DW+VKLW K NKP++SF + DYV DV WSP +PALFA V+
Sbjct: 461 AVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGM 520
Query: 335 GRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
GR+DLWNLN DTEVP S VEG PAL+RV WT +G ++ VGD +G I ++DVGE
Sbjct: 521 GRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGE 575
>UNIPROTKB|Q5NVM2 [details] [associations]
symbol:DYNC1I2 "Cytoplasmic dynein 1 intermediate chain 2"
species:9601 "Pongo abelii" [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025956 Pfam:PF00400 Pfam:PF11540 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005813 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0006810 GO:GO:0005874
GO:GO:0031982 GO:GO:0007018 GO:GO:0003774
GeneTree:ENSGT00690000101848 HOVERGEN:HBG004083 KO:K10415
GO:GO:0005868 CTD:1781 EMBL:CR857877 EMBL:CR859506 EMBL:CR926000
RefSeq:NP_001127088.1 RefSeq:NP_001128826.1 UniGene:Pab.18418
ProteinModelPortal:Q5NVM2 SMR:Q5NVM2 PRIDE:Q5NVM2
Ensembl:ENSPPYT00000015018 GeneID:100174119 KEGG:pon:100174119
InParanoid:Q5NVM2 Uniprot:Q5NVM2
Length = 638
Score = 1181 (420.8 bits), Expect = 5.2e-120, P = 5.2e-120
Identities = 212/355 (59%), Positives = 275/355 (77%)
Query: 35 QDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNE 94
+DL+ D G+ ++ KLS RQFFDE+WSK+R V+ +DWS+Q+PELL+ASY+ N++AP+E
Sbjct: 250 RDLE-DKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHE 308
Query: 95 PDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKT 154
PDGV L+WN CQS V+S FAKF+P L++GGTYSGQIVLWD R K+T
Sbjct: 309 PDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRT 368
Query: 155 PVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNN 214
PV RTPLS AHTHPV+C++V+GTQNAHNLISIS DG++CSWSL+MLS PQ++ +L +
Sbjct: 369 PVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVH-- 426
Query: 215 KQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHR 274
KQ+K +AV S++FP DVNNFVVG E+G+VY+ACRHG+KAG E +EGH+GP+ G+ H
Sbjct: 427 KQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHA 486
Query: 275 AQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVA 334
A G +DFSHL++TSS+DW+VKLW K NKP++SF + DYV DV WSP +PALFA V+
Sbjct: 487 AVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALFACVDGM 546
Query: 335 GRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
GR+DLWNLN DTEVP S VEG PAL+RV WT +G ++ VGD +G I ++DVGE
Sbjct: 547 GRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGE 601
>UNIPROTKB|F1P3C7 [details] [associations]
symbol:DYNC1I2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005868 "cytoplasmic dynein complex"
evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0031982 "vesicle" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025956 Pfam:PF00400 Pfam:PF11540 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005874 GO:GO:0031982 GO:GO:0007018
GeneTree:ENSGT00690000101848 GO:GO:0005868 OMA:WAHSGRE
EMBL:AADN02020242 IPI:IPI00596972 Ensembl:ENSGALT00000015547
Ensembl:ENSGALT00000015548 Uniprot:F1P3C7
Length = 609
Score = 1174 (418.3 bits), Expect = 2.9e-119, P = 2.9e-119
Identities = 211/355 (59%), Positives = 272/355 (76%)
Query: 35 QDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNE 94
+DL+ D G+ ++ KLS RQFFDE+WSK+R V +DWS+Q+PELL+ASY+ N++AP+E
Sbjct: 221 RDLE-DKEGEIQAGAKLSLNRQFFDERWSKHRVVCCLDWSSQYPELLVASYNNNEDAPHE 279
Query: 95 PDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKT 154
PDGV L+WN CQS V+S FAKF+P L++GGTYSGQIVLWD R K+T
Sbjct: 280 PDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRT 339
Query: 155 PVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNN 214
PV RTPLS AHTHPV+C++V+GTQNAHNLISIS DG++CSWSL+MLS PQ++ +L +
Sbjct: 340 PVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSQPQDSMELVH-- 397
Query: 215 KQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHR 274
KQ+K +AV ++FP DVNNFVVG E+G+VY+ACRHG+KAG E +EGH+GP+ G+ H
Sbjct: 398 KQSKAVAVTCMSFPIGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHA 457
Query: 275 AQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVA 334
A G +DFSHL++TSS+DW+VKLW K NKP++SF + DYV DV WSP +PALFA V+
Sbjct: 458 AVGPVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGM 517
Query: 335 GRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
GR+DLWNLN DTEVP S VEG PAL+RV WT G ++ VGD +G I ++DVGE
Sbjct: 518 GRLDLWNLNNDTEVPTASITVEGNPALNRVRWTHTGREIAVGDSEGQIVIYDVGE 572
>ZFIN|ZDB-GENE-090121-1 [details] [associations]
symbol:dync1i2b "dynein, cytoplasmic 1, intermediate
chain 2b" species:7955 "Danio rerio" [GO:0005868 "cytoplasmic
dynein complex" evidence=IEA] [GO:0007018 "microtubule-based
movement" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025956 Pfam:PF00400 Pfam:PF11540
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-090121-1
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0007018
GeneTree:ENSGT00690000101848 GO:GO:0005868 EMBL:CR384078
IPI:IPI00799576 Ensembl:ENSDART00000092571 Bgee:E7FG12
Uniprot:E7FG12
Length = 628
Score = 1171 (417.3 bits), Expect = 6.0e-119, P = 6.0e-119
Identities = 211/355 (59%), Positives = 271/355 (76%)
Query: 35 QDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNE 94
+DLQ D G+ ++ KLS RQF DE+WSK+R VT +DWS Q+PELL+ASY N+EAP+E
Sbjct: 240 RDLQ-DKEGESQAGAKLSLNRQFADERWSKHRVVTCLDWSPQYPELLVASYCSNEEAPHE 298
Query: 95 PDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKT 154
PDGV L+WN CQS V+S FA+F+P L++GGTYSGQIVLWD R K+T
Sbjct: 299 PDGVALVWNMKYKKTTPEYVFHCQSAVMSAAFAQFHPNLVVGGTYSGQIVLWDNRSNKRT 358
Query: 155 PVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNN 214
PV RTPLS AHTHPV+C++V+GTQNAHNLISIS DG++CSWSL+MLS+PQ++ +L +
Sbjct: 359 PVQRTPLSASAHTHPVYCVNVVGTQNAHNLISISTDGKMCSWSLDMLSTPQDSLELVF-- 416
Query: 215 KQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHR 274
KQ+K++AV S++FP DVNNFVVG EDG+VY+ACRHG+KAG E +EGH GP+ GL H
Sbjct: 417 KQSKSVAVTSMSFPLGDVNNFVVGSEDGSVYTACRHGSKAGISEMFEGHHGPITGLDCHT 476
Query: 275 AQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVA 334
A G +DFSHL++TSS+DW+VKLW K NKP++SF + DYV DV WSP +PALFA V+
Sbjct: 477 AAGPVDFSHLFVTSSFDWTVKLWGTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGV 536
Query: 335 GRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
G +DLWNLN +TEVP S VEG PAL+RV W +G ++ VGD +G + ++DVGE
Sbjct: 537 GHLDLWNLNNETEVPTASVTVEGNPALNRVRWAHSGREVAVGDSEGQLHIYDVGE 591
>RGD|620174 [details] [associations]
symbol:Dync1i2 "dynein cytoplasmic 1 intermediate chain 2"
species:10116 "Rattus norvegicus" [GO:0003774 "motor activity"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005868
"cytoplasmic dynein complex" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA;ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA;TAS] [GO:0031982 "vesicle" evidence=ISO;ISS]
[GO:0032403 "protein complex binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025956 Pfam:PF00400 Pfam:PF11540 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:620174 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0006810
GO:GO:0005874 GO:GO:0031982 GO:GO:0007018 GO:GO:0003774
eggNOG:NOG308180 HOGENOM:HOG000116383 HOVERGEN:HBG004083
OrthoDB:EOG4RBQJ5 GO:GO:0005868 EMBL:U39044 EMBL:U39045 EMBL:U39046
IPI:IPI00230954 IPI:IPI00339159 IPI:IPI00464798 UniGene:Rn.11014
PDB:2PG1 PDBsum:2PG1 ProteinModelPortal:Q62871 SMR:Q62871
IntAct:Q62871 STRING:Q62871 PhosphoSite:Q62871 PRIDE:Q62871
UCSC:RGD:620174 InParanoid:Q62871 EvolutionaryTrace:Q62871
NextBio:619443 ArrayExpress:Q62871 Genevestigator:Q62871
GermOnline:ENSRNOG00000009781 Uniprot:Q62871
Length = 638
Score = 1169 (416.6 bits), Expect = 9.8e-119, P = 9.8e-119
Identities = 212/355 (59%), Positives = 275/355 (77%)
Query: 35 QDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNE 94
+DL+ D G+ ++ KLS RQFFDE+WSK+R V+ +DWS+Q+PELL+ASY+ N+EAP+E
Sbjct: 250 RDLE-DKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEEAPHE 308
Query: 95 PDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKT 154
PDGV L+WN CQS V+S FAKF+P L++GGTYSGQIVLWD R K+T
Sbjct: 309 PDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRT 368
Query: 155 PVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNN 214
PV RTPLS AHTHPV+C++V+GTQNAHNLISIS DG++CSWSL+MLS PQ++ +L +
Sbjct: 369 PVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVH-- 426
Query: 215 KQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHR 274
KQ+K +AV S++FP DVNNFVVG E+G+VY+ACRHG+KAG E +EGH+GP+ G+ H
Sbjct: 427 KQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHA 486
Query: 275 AQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVA 334
A G +DFSHL++TSS+DW+VKLW+ K NKP++SF + DYV DV SP +PALFA V+
Sbjct: 487 AVGAVDFSHLFVTSSFDWTVKLWSTKNNKPLYSFEDNSDYVYDVIGSPTHPALFACVDGM 546
Query: 335 GRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
GR+DLWNLN DTEVP S VEG PAL+RV WT +G ++ VGD +G I ++DVGE
Sbjct: 547 GRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGE 601
>ZFIN|ZDB-GENE-060929-1086 [details] [associations]
symbol:dync1i2a "dynein, cytoplasmic 1,
intermediate chain 2a" species:7955 "Danio rerio" [GO:0005868
"cytoplasmic dynein complex" evidence=IEA] [GO:0007018
"microtubule-based movement" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-060929-1086 Gene3D:2.130.10.10
SUPFAM:SSF50978 HOVERGEN:HBG004083 KO:K10415 EMBL:BC124315
IPI:IPI00801948 RefSeq:NP_001070135.1 UniGene:Dr.38804
ProteinModelPortal:Q08CA8 STRING:Q08CA8 PRIDE:Q08CA8 GeneID:767729
KEGG:dre:767729 CTD:767729 eggNOG:NOG248972 NextBio:20918115
Uniprot:Q08CA8
Length = 471
Score = 1164 (414.8 bits), Expect = 3.3e-118, P = 3.3e-118
Identities = 206/355 (58%), Positives = 275/355 (77%)
Query: 35 QDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNE 94
+D++ + G+ ++ TKLS R+F D++WSK R VT +DWS Q+PELL+ASY+ N+EAP+E
Sbjct: 83 RDME-EKEGEMQAGTKLSLNRKFVDDRWSKQRVVTCLDWSPQYPELLVASYNNNEEAPHE 141
Query: 95 PDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKT 154
PDGV L+WN CQS V+S FAKF+P L++GGTYSGQIVLWD R ++T
Sbjct: 142 PDGVALVWNMKYKKATPEYVFHCQSAVMSAAFAKFHPNLVVGGTYSGQIVLWDNRSNRRT 201
Query: 155 PVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNN 214
PV RTPLS AHTHPV+C++V+GTQNAHNLISIS DG++CSWSL+MLS PQ++ +L +
Sbjct: 202 PVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKMCSWSLDMLSQPQDSMELVF-- 259
Query: 215 KQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHR 274
KQ+K++AV S++FP DVNNFVVG EDG+VY+A RHG++AG E +EGH GP+ G+ H
Sbjct: 260 KQSKSVAVTSMSFPLGDVNNFVVGSEDGSVYAASRHGSRAGISEMFEGHHGPITGIHCHT 319
Query: 275 AQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVA 334
A G +DFSHL+LT+S+DW+VKLW+ K NKP++SF + DYV DV WSP++PALFA V+
Sbjct: 320 AAGPVDFSHLFLTASFDWTVKLWSNKNNKPLYSFEDNSDYVYDVMWSPVHPALFACVDGL 379
Query: 335 GRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
GRVDLWNLN DTEVP S V+G+PAL+R+ W+ +G ++ VGD +G I ++DVGE
Sbjct: 380 GRVDLWNLNNDTEVPTASVAVDGSPALNRLRWSQSGREIAVGDSEGQIHIYDVGE 434
>ZFIN|ZDB-GENE-061215-62 [details] [associations]
symbol:dync1i1 "dynein, cytoplasmic 1, intermediate
chain 1" species:7955 "Danio rerio" [GO:0005868 "cytoplasmic dynein
complex" evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025956 Pfam:PF00400 Pfam:PF11540 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-061215-62 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0007018 CTD:1780 eggNOG:NOG308180
GeneTree:ENSGT00690000101848 HOGENOM:HOG000116383
HOVERGEN:HBG004083 KO:K10415 OrthoDB:EOG4RBQJ5 GO:GO:0005868
EMBL:BX571853 EMBL:BC128858 IPI:IPI00612037 RefSeq:NP_001073459.1
UniGene:Dr.87827 SMR:A1A5Y4 STRING:A1A5Y4
Ensembl:ENSDART00000086409 GeneID:561525 KEGG:dre:561525
InParanoid:A1A5Y4 OMA:FFNINSE NextBio:20883970 Uniprot:A1A5Y4
Length = 627
Score = 1130 (402.8 bits), Expect = 1.3e-114, P = 1.3e-114
Identities = 201/358 (56%), Positives = 272/358 (75%)
Query: 35 QDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNE 94
+D++ D GD ++ + LSF R F+DE WSK+R VT +DWS Q+PELL+ASY+ N++AP+E
Sbjct: 240 RDME-DKEGDLQAGSNLSFNRHFYDEHWSKHRVVTSLDWSPQYPELLVASYNTNEDAPHE 298
Query: 95 PDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKT 154
PDGV L+WN CQS V+S FA+F+P L++GGTYSGQI +WD R ++T
Sbjct: 299 PDGVVLVWNMKFKKATPEYIFHCQSSVMSVGFAQFHPNLVIGGTYSGQIAMWDNRSHRRT 358
Query: 155 PVHRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNN 214
PV RTPLS AHTHPV+C++V+GTQNA+NLI++S DG++CSWSL+MLS PQE+ +L YN
Sbjct: 359 PVQRTPLSATAHTHPVYCVNVVGTQNANNLITVSTDGKMCSWSLDMLSQPQESMELIYN- 417
Query: 215 KQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHR 274
++K +AV +AFP +DVNN+VVG E+G VY+A RHG+KAG E ++GH+GPV G+S H
Sbjct: 418 -KSKPVAVTCMAFPASDVNNYVVGSEEGTVYTASRHGSKAGIGEIFDGHQGPVTGISCHN 476
Query: 275 AQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVA 334
A G +DFSHL+ TSS+DW+VKLW+ K NKP++SF + DYV DV WSP++PALFATV+
Sbjct: 477 AVGPVDFSHLFTTSSFDWTVKLWSTKHNKPLYSFEDNADYVYDVMWSPVHPALFATVDGN 536
Query: 335 GRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGEVGI 392
GR+DLWNLN TEVP+ S VEG AL+RV W G ++ VGD +G + ++DVGE+ +
Sbjct: 537 GRLDLWNLNNYTEVPSASVSVEGGCALNRVRWASGGREVAVGDSEGRVWIYDVGELAV 594
>FB|FBgn0052823 [details] [associations]
symbol:Sdic3 "Sperm-specific dynein intermediate chain 3"
species:7227 "Drosophila melanogaster" [GO:0005868 "cytoplasmic
dynein complex" evidence=IEA] [GO:0007018 "microtubule-based
movement" evidence=ISS] [GO:0005858 "axonemal dynein complex"
evidence=ISS] [GO:0003777 "microtubule motor activity"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025956 Pfam:PF11540 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:AE014298 GO:GO:0007018
GeneTree:ENSGT00690000101848 KO:K10415 GO:GO:0005868
OrthoDB:EOG4WWQ0J RefSeq:NP_728323.2 UniGene:Dm.33687 HSSP:P26256
ProteinModelPortal:Q8IRZ3 SMR:Q8IRZ3 STRING:Q8IRZ3
EnsemblMetazoa:FBtr0089465 GeneID:318231 KEGG:dme:Dmel_CG32823
UCSC:CG32823-RB CTD:318231 FlyBase:FBgn0052823 InParanoid:Q8IRZ3
OMA:DMLGQPQ PhylomeDB:Q8IRZ3 GenomeRNAi:318231 NextBio:845254
ArrayExpress:Q8IRZ3 Bgee:Q8IRZ3 Uniprot:Q8IRZ3
Length = 544
Score = 1125 (401.1 bits), Expect = 4.5e-114, P = 4.5e-114
Identities = 206/357 (57%), Positives = 265/357 (74%)
Query: 44 DEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWN 103
DE+S +LS R F+DE+WSKNR +T MDWST P+L++ SYH N+E+PNEPDGV ++WN
Sbjct: 172 DERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPKLVVGSYHNNEESPNEPDGVVMVWN 231
Query: 104 XXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSV 163
CQS V+S CFAKFNP LILGGTYSGQIVLWD RVQK+TP+ RTPLS
Sbjct: 232 TKFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQIVLWDNRVQKRTPIQRTPLSA 291
Query: 164 MAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVL 223
AHTHPV+C+ ++GTQNAHN+ISIS+DG+LCSWSL+MLS PQ+T +LQ +Q+K +A+
Sbjct: 292 AAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQ--QRQSKAIAIT 349
Query: 224 SLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSH 283
S+AFP N++N+ V+G EDG VYSA RHG ++G E YE H GP+ G+S+H Q DF H
Sbjct: 350 SMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNEVYERHLGPITGISTHYNQLSPDFGH 409
Query: 284 LYLTSSYD-WSVKL----------WNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVE 332
L+LTSS WS+KL I NKP++SF + DY+MDV WSP++PALFA V+
Sbjct: 410 LFLTSSIKIWSLKLPISSCQFSVVSGINSNKPLYSFEDNSDYMMDVAWSPVHPALFAAVD 469
Query: 333 VAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
+GR+DLWNLN DTEVP S +V GAPAL+RV+WTP+G +C+GDE G + ++DV E
Sbjct: 470 GSGRLDLWNLNQDTEVPTASIVVAGAPALNRVSWTPSGLHVCIGDEAGKLYVYDVAE 526
>FB|FBgn0067861 [details] [associations]
symbol:Sdic1 "Sperm-specific dynein intermediate chain 1"
species:7227 "Drosophila melanogaster" [GO:0005868 "cytoplasmic
dynein complex" evidence=IEA] [GO:0003777 "microtubule motor
activity" evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0005858 "axonemal dynein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025956 Pfam:PF00400 Pfam:PF11540 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0019861 Gene3D:2.130.10.10
SUPFAM:SSF50978 EMBL:AE014298 GO:GO:0007018
GeneTree:ENSGT00690000101848 KO:K10415 GO:GO:0005868
OrthoDB:EOG4WWQ0J RefSeq:NP_524670.2 UniGene:Dm.23361
ProteinModelPortal:Q9W5W4 SMR:Q9W5W4 IntAct:Q9W5W4 MINT:MINT-976997
STRING:Q9W5W4 EnsemblMetazoa:FBtr0089604 GeneID:43984
KEGG:dme:Dmel_CG9580 UCSC:CG9580-RA CTD:43984 FlyBase:FBgn0067861
InParanoid:Q9W5W4 PhylomeDB:Q9W5W4 GenomeRNAi:43984 NextBio:836510
ArrayExpress:Q9W5W4 Bgee:Q9W5W4 Uniprot:Q9W5W4
Length = 517
Score = 916 (327.5 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
Identities = 162/280 (57%), Positives = 212/280 (75%)
Query: 44 DEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWN 103
DE+S +LS R F+DE+WSKNR +T MDWST PEL++ SYH N+E+PNEPDGV ++WN
Sbjct: 172 DERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPELVVGSYHNNEESPNEPDGVVMVWN 231
Query: 104 XXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSV 163
CQS V+S CFAKFNP LILGGTYSGQIVLWD RVQK+TP+ RTPLS
Sbjct: 232 TKFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQIVLWDNRVQKRTPIQRTPLSA 291
Query: 164 MAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVL 223
AHTHPV+C+ ++GTQNAHN+ISIS+DG+LCSWSL+MLS PQ+T +LQ +Q+K +A+
Sbjct: 292 AAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQ--QRQSKAIAIT 349
Query: 224 SLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSH 283
S+AFP N++N+ V+G EDG VYSA RHG ++G E YE H GP+ G+S+H Q DF H
Sbjct: 350 SMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNEVYERHLGPITGISTHYNQLSPDFGH 409
Query: 284 LYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPI 323
L+LTSS DW++KLW++K+ KP++SF ++ + WSP+
Sbjct: 410 LFLTSSIDWTIKLWSLKDTKPLYSFEQY------IAWSPV 443
Score = 102 (41.0 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 357 GAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
GAPAL R +WTP+G LC+GDE G + ++DV E
Sbjct: 459 GAPALRRDSWTPSG--LCIGDEAGKLYVYDVAE 489
Score = 57 (25.1 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 17/61 (27%), Positives = 27/61 (44%)
Query: 291 DWSVKLWNIKENK--PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEV 348
D V +WN K K P F+ + VM ++ NP L +G++ LW+ +
Sbjct: 224 DGVVMVWNTKFKKSTPEDVFH-CQSAVMSTCFAKFNPNLILGGTYSGQIVLWDNRVQKRT 282
Query: 349 P 349
P
Sbjct: 283 P 283
>DICTYBASE|DDB_G0280849 [details] [associations]
symbol:dicA "cytoplasmic dynein intermediate chain"
species:44689 "Dictyostelium discoideum" [GO:0005813 "centrosome"
evidence=TAS] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0005868 "cytoplasmic dynein complex"
evidence=IEA] [GO:0030286 "dynein complex" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003774
"motor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025956
Pfam:PF00400 Pfam:PF11540 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0280849 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR GO:GO:0005874
GO:GO:0007018 GO:GO:0003774 eggNOG:NOG308180 KO:K10415
GO:GO:0005868 EMBL:U25116 EMBL:AAFI02000039 RefSeq:XP_640973.1
ProteinModelPortal:P54703 STRING:P54703 EnsemblProtists:DDB0215397
GeneID:8622777 KEGG:ddi:DDB_G0280849 OMA:THANILV
ProtClustDB:CLSZ2497213 Uniprot:P54703
Length = 654
Score = 823 (294.8 bits), Expect = 4.5e-82, P = 4.5e-82
Identities = 151/358 (42%), Positives = 235/358 (65%)
Query: 47 SSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNXXX 106
+S +L DE+W+K+R++T + WST+HPEL+++SY N+ ++PDGV L+W+
Sbjct: 261 TSKELKLLATLSDERWTKHRSITDISWSTKHPELVVSSYSANEAGSHDPDGVALVWSVNN 320
Query: 107 XXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAH 166
CQSPV++ F+KF+ LI+GGTYSGQIV+WDTR + K PV +TPLS + H
Sbjct: 321 YFQKPEYVFTCQSPVMTTFFSKFHSTLIVGGTYSGQIVIWDTRAEAK-PVQKTPLSSVGH 379
Query: 167 THPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKN------- 219
THPV+ M+V+G+ NA++L+SIS D +LCSW+LE LS P ET +L +N + N
Sbjct: 380 THPVYSMAVVGSANANSLVSISTDAKLCSWNLENLSQPIETIELNSSNTNSANKAGGGGS 439
Query: 220 --------LAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLS 271
+AV SL FP+N++N+F +G E+G + A RHGN+ E Y+GH GP+ +
Sbjct: 440 GGGAPNMSIAVTSLVFPENELNHFYIGTEEGVICQAGRHGNRIVMNERYKGHFGPITSVD 499
Query: 272 SHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATV 331
H ++G DFS +L+SS DW+ KLW+ K+ P++SF ++ DYV D +WSP++P++F+T
Sbjct: 500 LHPSKGGADFSQYFLSSSTDWTCKLWSSKKETPLYSFEDYVDYVYDARWSPVHPSIFSTG 559
Query: 332 EVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
+ +G + LW+LN D E P + +++R+ W+ +G ++ VGD G++++FD E
Sbjct: 560 DGSGTLSLWDLNQDLEAPIFRHKISNR-SVNRLAWSHDGKRILVGDSGGSLSLFDSSE 616
>ASPGD|ASPL0000049823 [details] [associations]
symbol:nudI species:162425 "Emericella nidulans"
[GO:0051010 "microtubule plus-end binding" evidence=IDA]
[GO:0030473 "nuclear migration along microtubule" evidence=IMP]
[GO:0005868 "cytoplasmic dynein complex" evidence=IDA] [GO:0001411
"hyphal tip" evidence=IDA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0035974 "meiotic spindle pole body" evidence=IEA] [GO:0030981
"cortical microtubule cytoskeleton" evidence=IEA] [GO:0030989
"dynein-driven meiotic oscillatory nuclear movement" evidence=IEA]
[GO:0030437 "ascospore formation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
EMBL:BN001307 EMBL:AACD01000022 eggNOG:NOG308180
HOGENOM:HOG000116383 KO:K10415 OrthoDB:EOG4G1QRQ RefSeq:XP_659058.1
ProteinModelPortal:Q5BDC6 STRING:Q5BDC6
EnsemblFungi:CADANIAT00008067 GeneID:2875090 KEGG:ani:AN1454.2
OMA:FSPFHPN Uniprot:Q5BDC6
Length = 689
Score = 584 (210.6 bits), Expect = 4.6e-78, Sum P(2) = 4.6e-78
Identities = 124/310 (40%), Positives = 185/310 (59%)
Query: 1 MDWAEAGESQISGTLHGLQADWNEEGDPGLPQLPQDLQFDMT-GDEKSSTKLSFCRQFFD 59
+D+ E I L +++ D L + +L+ D G +K K C QF+D
Sbjct: 241 LDFVERSAKVIE---RALDEEYDVLADYELGGMDAELEDDDEHGKKKRGIK-EVC-QFWD 295
Query: 60 EKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNXXXXXXXXXXXXXCQS 119
E+WSK R ++ + +S + PEL+LASY +N AP+EPDG+ IWN S
Sbjct: 296 ERWSKKRMISDICFSPKFPELVLASYTKNPSAPHEPDGLVQIWNQHLHSRPEYVFHST-S 354
Query: 120 PVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKK---TPVHRTPLSVMAHTHPVFCMSVI 176
+L+ F+ F+P +I+GG+YSGQ++LWDTR + PV +TPL+ HTHPV+ +S++
Sbjct: 355 DILTAKFSPFHPNIIVGGSYSGQVLLWDTRSSRAGGGAPVQKTPLTGAGHTHPVYSISIV 414
Query: 177 GTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNN-KQTKNLAVLSLAFPQNDVNNF 235
GTQNAHN+I+ S DG +C W+++MLS PQE +L +T++LA +++FPQ+D F
Sbjct: 415 GTQNAHNIITASTDGVVCGWTVDMLSQPQEYLELSTPPPSKTEDLAPTTISFPQSDPTFF 474
Query: 236 VVGCEDGNVYSACRH---GNKAGNVE--CYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSY 290
+VG E+G +Y R+ G KAG Y GH P++ + H A+G +D L L+SS
Sbjct: 475 IVGTEEGGIYPCHRYDRAGAKAGTDHRLAYRGHAAPIMSTAFHPARGPVDLGDLMLSSSL 534
Query: 291 DWSVKLWNIK 300
DWSVKLW I+
Sbjct: 535 DWSVKLWRIR 544
Score = 220 (82.5 bits), Expect = 4.6e-78, Sum P(2) = 4.6e-78
Identities = 56/153 (36%), Positives = 77/153 (50%)
Query: 260 YEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK---------------- 303
Y GH P++ + H A+G +D L L+SS DWSVKLW I+
Sbjct: 504 YRGHAAPIMSTAFHPARGPVDLGDLMLSSSLDWSVKLWRIRPPAATAPAATSGITDTQVV 563
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPA--TSAIVEGAPA 360
P+ N D V D +WSP P +F+ V+ AG +++W+L DTEVPA T+ A
Sbjct: 564 TPILDINR-EDVVYDARWSPHRPGVFSLVDGAGNLEVWDLYTDTEVPAVRTTPSKGRAGV 622
Query: 361 LSR----VTWTPN-GTQLCVGDEKGAITMFDVG 388
LSR V W G +L G G +T+F+VG
Sbjct: 623 LSRSLNKVAWEEREGRRLATGGLDGVVTVFEVG 655
>WB|WBGene00015927 [details] [associations]
symbol:dyci-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0035046 "pronuclear
migration" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0043652 "engulfment of apoptotic
cell" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0002009 GO:GO:0035046
GO:GO:0006898 GO:GO:0040007 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0043652 eggNOG:NOG308180
GeneTree:ENSGT00690000101848 HOGENOM:HOG000116383 KO:K10415
EMBL:FO080597 PIR:H88712 RefSeq:NP_501038.1
ProteinModelPortal:O45087 SMR:O45087 DIP:DIP-25870N IntAct:O45087
MINT:MINT-1066510 STRING:O45087 PaxDb:O45087
EnsemblMetazoa:C17H12.1.1 EnsemblMetazoa:C17H12.1.2 GeneID:177440
KEGG:cel:CELE_C17H12.1 UCSC:C17H12.1.1 CTD:177440 WormBase:C17H12.1
InParanoid:O45087 OMA:NQSSPDF NextBio:896830 Uniprot:O45087
Length = 643
Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
Identities = 140/350 (40%), Positives = 218/350 (62%)
Query: 47 SSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNXXX 106
S L + + DE W+ R VT M +S +P+LL SY + PNEP GV ++WN
Sbjct: 265 SDDLLHLAQVYQDETWTAKRLVTGMAFSEHYPDLLAVSYGPC-DIPNEPPGVIVVWNTKS 323
Query: 107 XXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRV-QKKTPVHRTPLSVMA 165
CQS + S FA+F+ +L+L G SGQI +WD R+ +K P++R+PL+ A
Sbjct: 324 KRMTAEFIVYCQSEIQSVAFARFHAHLLLAGCESGQICVWDNRLTSRKLPINRSPLTTQA 383
Query: 166 HTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLSL 225
HT+ V C++V+GT+NAHN +S+S DGR+CSW+++ L+ P + ++L K+ K + +
Sbjct: 384 HTYTVSCLAVVGTKNAHNFVSLSRDGRICSWNVDNLTQPVDGKELM--TKEGKAASATRM 441
Query: 226 AFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVE---CYEGHEGPVVGLSSHRAQGHIDFS 282
+FP ++ FVVG + G + +A R+G ++ CY+GH G + G+ HRA G +DFS
Sbjct: 442 SFPIGEMQTFVVGTDTGEILAASRNGADPAVIKTDVCYKGHSGTLTGIEFHRASGVVDFS 501
Query: 283 HLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNL 342
HL+++SS+DW+VKLW+ K+ SF D V+DV WSP++PA+FA+++ G + +WNL
Sbjct: 502 HLFISSSHDWTVKLWSTKDANLKFSFESHPDLVLDVAWSPVHPAVFASIDADGNIFVWNL 561
Query: 343 NLDTEVPATS--AIVEGAPA-LSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
N D E P A EG ++R+ W+P+G + VGD++G + M+DV E
Sbjct: 562 NEDVEGPVARLRAGAEGESVYMNRLIWSPDGKHVFVGDDEGRVHMYDVRE 611
>UNIPROTKB|O45087 [details] [associations]
symbol:dyci-1 "Protein DYCI-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009792 GO:GO:0002009 GO:GO:0035046 GO:GO:0006898
GO:GO:0040007 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0043652 eggNOG:NOG308180 GeneTree:ENSGT00690000101848
HOGENOM:HOG000116383 KO:K10415 EMBL:FO080597 PIR:H88712
RefSeq:NP_501038.1 ProteinModelPortal:O45087 SMR:O45087
DIP:DIP-25870N IntAct:O45087 MINT:MINT-1066510 STRING:O45087
PaxDb:O45087 EnsemblMetazoa:C17H12.1.1 EnsemblMetazoa:C17H12.1.2
GeneID:177440 KEGG:cel:CELE_C17H12.1 UCSC:C17H12.1.1 CTD:177440
WormBase:C17H12.1 InParanoid:O45087 OMA:NQSSPDF NextBio:896830
Uniprot:O45087
Length = 643
Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
Identities = 140/350 (40%), Positives = 218/350 (62%)
Query: 47 SSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNXXX 106
S L + + DE W+ R VT M +S +P+LL SY + PNEP GV ++WN
Sbjct: 265 SDDLLHLAQVYQDETWTAKRLVTGMAFSEHYPDLLAVSYGPC-DIPNEPPGVIVVWNTKS 323
Query: 107 XXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRV-QKKTPVHRTPLSVMA 165
CQS + S FA+F+ +L+L G SGQI +WD R+ +K P++R+PL+ A
Sbjct: 324 KRMTAEFIVYCQSEIQSVAFARFHAHLLLAGCESGQICVWDNRLTSRKLPINRSPLTTQA 383
Query: 166 HTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLSL 225
HT+ V C++V+GT+NAHN +S+S DGR+CSW+++ L+ P + ++L K+ K + +
Sbjct: 384 HTYTVSCLAVVGTKNAHNFVSLSRDGRICSWNVDNLTQPVDGKELM--TKEGKAASATRM 441
Query: 226 AFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVE---CYEGHEGPVVGLSSHRAQGHIDFS 282
+FP ++ FVVG + G + +A R+G ++ CY+GH G + G+ HRA G +DFS
Sbjct: 442 SFPIGEMQTFVVGTDTGEILAASRNGADPAVIKTDVCYKGHSGTLTGIEFHRASGVVDFS 501
Query: 283 HLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNL 342
HL+++SS+DW+VKLW+ K+ SF D V+DV WSP++PA+FA+++ G + +WNL
Sbjct: 502 HLFISSSHDWTVKLWSTKDANLKFSFESHPDLVLDVAWSPVHPAVFASIDADGNIFVWNL 561
Query: 343 NLDTEVPATS--AIVEGAPA-LSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
N D E P A EG ++R+ W+P+G + VGD++G + M+DV E
Sbjct: 562 NEDVEGPVARLRAGAEGESVYMNRLIWSPDGKHVFVGDDEGRVHMYDVRE 611
>GENEDB_PFALCIPARUM|PF10_0196 [details] [associations]
symbol:PF10_0196 "cytoplasmic dynein
intermediate chain, putative" species:5833 "Plasmodium falciparum"
[GO:0003777 "microtubule motor activity" evidence=ISS] [GO:0005868
"cytoplasmic dynein complex" evidence=ISS] [GO:0007018
"microtubule-based movement" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0003777
EMBL:AE014185 GO:GO:0007018 KO:K10415 GO:GO:0005868 OMA:SISECDI
RefSeq:XP_001347481.1 ProteinModelPortal:Q8IJJ9 IntAct:Q8IJJ9
MINT:MINT-1676651 EnsemblProtists:PF10_0196:mRNA GeneID:810354
KEGG:pfa:PF10_0196 EuPathDB:PlasmoDB:PF3D7_1020300
HOGENOM:HOG000284454 ProtClustDB:CLSZ2432566 Uniprot:Q8IJJ9
Length = 769
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 129/351 (36%), Positives = 202/351 (57%)
Query: 40 DMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPN--EPDG 97
DM + + KL ++ +K+ R +T + S + EL LASY + E N EP+G
Sbjct: 389 DMLENTQDVDKLKLMNTYYCKKYINGRGITDVRTSNIYNELFLASYGLS-ECSNCIEPEG 447
Query: 98 VCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVH 157
L+WN +S V + F KF+P+LI+GGTY+G +VLWD R K P+
Sbjct: 448 YVLLWNVTMKNRPEYVFTS-ESSVCTALFNKFHPHLIIGGTYTGNVVLWDIRASLK-PIQ 505
Query: 158 RTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQT 217
+T L+ H H ++C +IGTQN+HNLI+ DGRLC+WSL M + P T DL+ N++
Sbjct: 506 QTLLTSQGHMHSIYCAEIIGTQNSHNLITADTDGRLCNWSLSMFTYPSNTIDLKKGNRE- 564
Query: 218 KNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQG 277
++ + AFP+ D+N G EDG ++ A HG K G + H+GP+ H +
Sbjct: 565 --ISCTTFAFPEGDINTLYGGTEDGTLFQAQIHGMKVGIINSDIIHDGPITSAQFHPSLD 622
Query: 278 HI-DFSHLYLTSSYDWSVKLWNIKENK-PVHSFNEFRDYVMDVQWSPINPALFATVEVAG 335
+ D + L LTSS DW+ +L +IK K P+ F+ F DY+MD++WSP +PALF+T G
Sbjct: 623 EMNDNNDLILTSSVDWTCQLLSIKNIKNPLIVFDSFEDYIMDIKWSPTHPALFSTCSSNG 682
Query: 336 RVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFD 386
++ LWN+ DTE A ++ + + +++ W+ +G +L D +G +T+++
Sbjct: 683 KIKLWNILYDTESSFYEASLDNS-STNKLAWSHDGKRLIAADTQGCLTLWN 732
>UNIPROTKB|Q8IJJ9 [details] [associations]
symbol:PF10_0196 "Cytoplasmic dynein intermediate chain,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003777
"microtubule motor activity" evidence=ISS] [GO:0005868 "cytoplasmic
dynein complex" evidence=ISS] [GO:0007018 "microtubule-based
movement" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0003777 EMBL:AE014185
GO:GO:0007018 KO:K10415 GO:GO:0005868 OMA:SISECDI
RefSeq:XP_001347481.1 ProteinModelPortal:Q8IJJ9 IntAct:Q8IJJ9
MINT:MINT-1676651 EnsemblProtists:PF10_0196:mRNA GeneID:810354
KEGG:pfa:PF10_0196 EuPathDB:PlasmoDB:PF3D7_1020300
HOGENOM:HOG000284454 ProtClustDB:CLSZ2432566 Uniprot:Q8IJJ9
Length = 769
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 129/351 (36%), Positives = 202/351 (57%)
Query: 40 DMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPN--EPDG 97
DM + + KL ++ +K+ R +T + S + EL LASY + E N EP+G
Sbjct: 389 DMLENTQDVDKLKLMNTYYCKKYINGRGITDVRTSNIYNELFLASYGLS-ECSNCIEPEG 447
Query: 98 VCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVH 157
L+WN +S V + F KF+P+LI+GGTY+G +VLWD R K P+
Sbjct: 448 YVLLWNVTMKNRPEYVFTS-ESSVCTALFNKFHPHLIIGGTYTGNVVLWDIRASLK-PIQ 505
Query: 158 RTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQT 217
+T L+ H H ++C +IGTQN+HNLI+ DGRLC+WSL M + P T DL+ N++
Sbjct: 506 QTLLTSQGHMHSIYCAEIIGTQNSHNLITADTDGRLCNWSLSMFTYPSNTIDLKKGNRE- 564
Query: 218 KNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQG 277
++ + AFP+ D+N G EDG ++ A HG K G + H+GP+ H +
Sbjct: 565 --ISCTTFAFPEGDINTLYGGTEDGTLFQAQIHGMKVGIINSDIIHDGPITSAQFHPSLD 622
Query: 278 HI-DFSHLYLTSSYDWSVKLWNIKENK-PVHSFNEFRDYVMDVQWSPINPALFATVEVAG 335
+ D + L LTSS DW+ +L +IK K P+ F+ F DY+MD++WSP +PALF+T G
Sbjct: 623 EMNDNNDLILTSSVDWTCQLLSIKNIKNPLIVFDSFEDYIMDIKWSPTHPALFSTCSSNG 682
Query: 336 RVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFD 386
++ LWN+ DTE A ++ + + +++ W+ +G +L D +G +T+++
Sbjct: 683 KIKLWNILYDTESSFYEASLDNS-STNKLAWSHDGKRLIAADTQGCLTLWN 732
>UNIPROTKB|G4MTS7 [details] [associations]
symbol:MGG_04771 "Cytoplasmic dynein 1 intermediate chain
2" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0043581
EMBL:CM001232 KO:K10415 RefSeq:XP_003713723.1
ProteinModelPortal:G4MTS7 EnsemblFungi:MGG_04771T0 GeneID:2677897
KEGG:mgr:MGG_04771 Uniprot:G4MTS7
Length = 695
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 117/259 (45%), Positives = 164/259 (63%)
Query: 50 KLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNXXXXXX 109
K+ RQF+DE+WSK R +T +D+S + +L+LAS +N AP+EPDG+ +WN
Sbjct: 290 KIREIRQFYDERWSKKRPITSIDFSPKFSDLVLASASKNVTAPHEPDGIVQVWNLNLHDR 349
Query: 110 XXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHP 169
QS +L+ F+ F+P LI+GG YSGQ++LWDTR + PV +TPL+ HTHP
Sbjct: 350 AEFVLHA-QSDILTAKFSPFHPNLIIGGAYSGQVLLWDTRSRSSAPVQKTPLTGQGHTHP 408
Query: 170 VFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTK--NLAVLSLAF 227
V+ + VIGTQNA+N+I+ S DG +C WS++ML++PQE+ L +QTK +L+ +AF
Sbjct: 409 VYSLDVIGTQNANNIITTSTDGVVCGWSVDMLAAPQESLML-LTPQQTKTDDLSPTCMAF 467
Query: 228 PQNDVNNFVVGCEDGNVYSACRH---GNKAG---NVECYEGHEGPVVGLSSHRAQGHIDF 281
PQ D F+VG E+G +Y R+ G KAG NV Y GH PV + H G +DF
Sbjct: 468 PQADPTYFLVGSEEGVIYPCHRYDRAGAKAGVDKNVS-YRGHSAPVRSVDFHSNLGPVDF 526
Query: 282 SHLYLTSSYDWSVKLWNIK 300
L L+SS DWS KLW ++
Sbjct: 527 GDLVLSSSLDWSAKLWKVR 545
Score = 215 (80.7 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 54/155 (34%), Positives = 77/155 (49%)
Query: 256 NVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIK------------ENK 303
NV Y GH PV + H G +DF L L+SS DWS KLW ++ N
Sbjct: 502 NVS-YRGHSAPVRSVDFHSNLGPVDFGDLVLSSSLDWSAKLWKVRPPGGIGTAGLLSSNA 560
Query: 304 PV--HSFNEF--RDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAP 359
V EF D V D WSP+ P +F+ V+ AG +++W+L ++TE P P
Sbjct: 561 EVAVSPLMEFAREDIVYDAAWSPLRPGVFSLVDGAGYLEIWDLTVETEEPVARIQPNARP 620
Query: 360 -----ALSRVTWTPN-GTQLCVGDEKGAITMFDVG 388
+L++V W + G +L G GA+T+F+VG
Sbjct: 621 GARVASLNKVAWERSEGKRLATGGIAGALTVFEVG 655
>POMBASE|SPBC646.17c [details] [associations]
symbol:dic1 "meiotic dynein intermediate chain Dic1"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0030286 "dynein complex" evidence=TAS]
[GO:0030437 "ascospore formation" evidence=IMP] [GO:0030981
"cortical microtubule cytoskeleton" evidence=IDA] [GO:0030989
"dynein-driven meiotic oscillatory nuclear movement" evidence=IMP]
[GO:0035974 "meiotic spindle pole body" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC646.17c GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0030437 GO:GO:0030286 GO:GO:0030989
GO:GO:0030981 eggNOG:NOG308180 KO:K10415 PIR:T40593
RefSeq:XP_001713125.1 ProteinModelPortal:O94518 STRING:O94518
EnsemblFungi:SPBC646.17c.1 GeneID:5802757 KEGG:spo:SPBC646.17c
OMA:SISECDI OrthoDB:EOG4G1QRQ NextBio:20892063 GO:GO:0035974
Uniprot:O94518
Length = 544
Score = 293 (108.2 bits), Expect = 9.6e-38, Sum P(2) = 9.6e-38
Identities = 83/262 (31%), Positives = 127/262 (48%)
Query: 57 FFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNXXXXXXXXXXXXX 116
F DEK + N V + +S+ ELL+ SY + KEA G+ ++WN
Sbjct: 184 FQDEKITLNSVVNSISYSSFFEELLITSYAKPKEALRTR-GLAIVWNQRWKNSPESVLKA 242
Query: 117 CQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVI 176
+S + C + F+P LI GG Y+GQ+ LWD R Q + PV T + H PV ++ I
Sbjct: 243 -RSEITVCKPSPFHPQLIAGGAYNGQVFLWDLR-QGQYPVSFTTIISGGHLEPVTDITYI 300
Query: 177 GTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYN-NKQTKNLAVLSLAF-PQNDVNN 234
++N+++ S DG + W +M S P ET L + ++ + L+F P+N++
Sbjct: 301 NNPPSNNIVTCSTDGLVHIWEPDMFSRPSETICLSSQVDSSSQCIPATCLSFIPENNME- 359
Query: 235 FVVGCEDGNVYSACRHG---NKA---GNVECYEGHEGPVVGLSSHRAQGHIDF----SHL 284
F+VG EDG + R KA NV YEGH + G+ + F
Sbjct: 360 FLVGAEDGKLQRGYRSDYSETKAVQPSNVS-YEGHNVFISGIDVMTSNSQNVFLEKNKDF 418
Query: 285 YLTSSYDWSVKLWNIKENKPVH 306
LTSS+DW+V+LW ++ H
Sbjct: 419 ALTSSFDWTVRLWQCSPSRNQH 440
Score = 140 (54.3 bits), Expect = 9.6e-38, Sum P(2) = 9.6e-38
Identities = 29/90 (32%), Positives = 47/90 (52%)
Query: 298 NIKENKPVHSFNEF--RDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIV 355
++ E ++S F + V DV+W P FA+V+ G ++LW+L D E P TS I
Sbjct: 447 DLDEQVIINSCKTFTHKAMVFDVKWCVSEPCCFASVDALGNLNLWDLQKDVEAPVTSDIP 506
Query: 356 EGAPALSRVTWTPNGTQLCVGDEKGAITMF 385
+G P L+++ W P L G G + ++
Sbjct: 507 DGKP-LNKIAWQPEKRNLACGGLNGNVHIY 535
>ZFIN|ZDB-GENE-050522-322 [details] [associations]
symbol:wdr78 "WD repeat domain 78" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050522-322
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:NOG145991 CTD:79819
EMBL:BC095632 IPI:IPI00494572 RefSeq:NP_001018595.1
UniGene:Dr.92506 ProteinModelPortal:Q502N3 GeneID:553797
KEGG:dre:553797 HOGENOM:HOG000148595 HOVERGEN:HBG059084
InParanoid:Q502N3 OrthoDB:EOG4SJ5F1 NextBio:20880515 Uniprot:Q502N3
Length = 778
Score = 306 (112.8 bits), Expect = 3.0e-26, P = 3.0e-26
Identities = 91/370 (24%), Positives = 168/370 (45%)
Query: 41 MTGDEKSST---KLSFCRQFFDEKW------SKNRNVTYMDWSTQHPELLLASYHRNKEA 91
M +E+S T K S C F + W + RNVT M W+ ++P+LL Y + E
Sbjct: 396 MVMEEESWTEQSKNSHC-PFLERLWDFSCELTMGRNVTCMVWNKKNPDLLAVGYGQ-VEF 453
Query: 92 PNEPDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQ 151
N G+ W+ C+S V + F+ N + G Y G I +++ +
Sbjct: 454 KNPNSGLVCCWSLKNPTWPDRVFY-CESGVTALDFSASNANQLAVGMYDGTIAIYNVQTS 512
Query: 152 KKTPVHRTPLSVMAHTHPVFCMSVIGTQNA------HNLISISNDGRLCSW----SLEML 201
++TP+ + HT PV+ ++ I ++ L+S+S+DGR+ W S+E +
Sbjct: 513 EQTPITDSSDCANLHTSPVWQLTWIDHEDGLAADKGEILVSVSSDGRISKWIHYKSMECV 572
Query: 202 SSPQ-ETRDLQYNNKQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECY 260
+ + DLQ+ + + F ND ++VG E+G+++ C ++ Y
Sbjct: 573 DLMKLKIHDLQWKQHISSLTPGMCFDFHPNDSKIYLVGTEEGHIHK-CSSSYNEQYLDSY 631
Query: 261 EGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQW 320
+ H+ PV ++ S ++L+ S DW+++LW PV F + V D+ W
Sbjct: 632 KAHKRPV-----YKVTWSPFCSDVFLSCSSDWTIQLWRQDLQIPVMGFTSGQRVVFDIMW 686
Query: 321 SPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKG 380
SP +F V G+V++W+L + + P + + ++P + VGD +G
Sbjct: 687 SPHCATVFGAVS-EGKVEIWDLRVSSLDPTLVNWTSPGVNPTALLFSPETDCVLVGDSEG 745
Query: 381 AITMFDVGEV 390
+T++ + +
Sbjct: 746 QVTVYKLKNI 755
>UNIPROTKB|I3LLI7 [details] [associations]
symbol:DNAI2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005858 "axonemal dynein
complex" evidence=IEA] [GO:0003777 "microtubule motor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0042384 GO:GO:0003777
GO:GO:0035085 GeneTree:ENSGT00690000101848 GO:GO:0005858
OMA:HPDGNRK EMBL:FP680599 Ensembl:ENSSSCT00000030835 Uniprot:I3LLI7
Length = 575
Score = 297 (109.6 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 97/360 (26%), Positives = 158/360 (43%)
Query: 44 DEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYH-RN-KEAPNEPDGVCLI 101
DE S K F D + K R+ T++ W L +Y N + AP I
Sbjct: 144 DEAPSAKT--INVFRDPQEIK-RSATHLSWHPDGNRKLAVAYSCLNFQRAPEGMSNESYI 200
Query: 102 WNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPL 161
W+ SP+++ + + +++LGG Y+GQI WDTR K + V
Sbjct: 201 WDLENPNRPEISLKP-PSPLVTLEYNPKDSHVLLGGCYNGQIACWDTR--KGSLVAELST 257
Query: 162 SVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNK-QTKN- 219
+H PV+ + ++ S S DG++ W + +S P E + K Q +N
Sbjct: 258 IEFSHRDPVYGTIWLQSKTGTECFSASTDGQVMWWDIRKMSEPTEVVVMDITKKEQLENA 317
Query: 220 LAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGN-KAGNVEC-YEGHEGPVVGLSSHRAQG 277
L +SL F F+VG E G V S R +A + C + GH GPV L Q
Sbjct: 318 LGAISLEFESTLPTKFMVGTEQGIVISCNRKAKTQAEKIVCTFSGHHGPVYAL-----QR 372
Query: 278 HIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFR-DYVMDVQWSPINPALFATVEVAGR 336
+ + +LT DW+ ++W+ + + ++ Y+ D WSP+ PA+F T ++ G
Sbjct: 373 NPFYPKNFLTVG-DWTARIWSEDSRESSIMWTKYHMAYLTDGAWSPVRPAVFFTTKMDGT 431
Query: 337 VDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGEVGIACLK 396
+D+W+ PA S V AL + +G+ + G + G T+ +V G+ L+
Sbjct: 432 LDIWDFVFKQCDPALSLKVCDE-ALFSLRVQDSGSFIACGSQLGTATLLEVSS-GLCTLQ 489
>MGI|MGI:2685574 [details] [associations]
symbol:Dnaic2 "dynein, axonemal, intermediate chain 2"
species:10090 "Mus musculus" [GO:0003774 "motor activity"
evidence=IEA] [GO:0003777 "microtubule motor activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005858 "axonemal dynein complex" evidence=ISO]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] [GO:0008152 "metabolic process" evidence=ISO]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0030286 "dynein complex" evidence=IEA] [GO:0035085 "cilium
axoneme" evidence=ISO] [GO:0042384 "cilium assembly" evidence=ISO]
[GO:0042995 "cell projection" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2685574 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
EMBL:CH466558 GO:GO:0042384 GO:GO:0005874 GO:GO:0003777
GO:GO:0035085 EMBL:AL663079 GeneTree:ENSGT00690000101848
GO:GO:0005858 HOGENOM:HOG000259651 HOVERGEN:HBG013035 KO:K11143
OMA:HPDGNRK OrthoDB:EOG45TCN2 EMBL:EF565270 IPI:IPI00112690
IPI:IPI00403331 RefSeq:NP_001030050.2 UniGene:Mm.212764
ProteinModelPortal:A2AC93 SMR:A2AC93 DIP:DIP-59778N STRING:A2AC93
PhosphoSite:A2AC93 PaxDb:A2AC93 PRIDE:A2AC93 DNASU:432611
Ensembl:ENSMUST00000069325 Ensembl:ENSMUST00000092469
Ensembl:ENSMUST00000141762 GeneID:432611 KEGG:mmu:432611
UCSC:uc007mfn.1 CTD:432611 InParanoid:A2AC94 NextBio:407836
Bgee:A2AC93 Genevestigator:A2AC93 Uniprot:A2AC93
Length = 623
Score = 296 (109.3 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 90/330 (27%), Positives = 147/330 (44%)
Query: 66 RNVTYMDWSTQHPELLLASYH--RNKEAPNEPDGVCLIWNXXXXXXXXXXXXXCQSPVLS 123
R T++ W L +Y + + AP + IW+ SP+++
Sbjct: 163 RTATHLSWHPDGNRKLAVAYSCLKFQRAPMSMNYDSYIWDLENPNRPEIALKPL-SPLVT 221
Query: 124 CCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIGTQNAHN 183
+ + +++LGG Y+GQI WDTR K + V +H PV+ + ++
Sbjct: 222 LEYNPKDSHVLLGGCYNGQIACWDTR--KGSLVAELSTIEFSHRDPVYGTIWLQSKTGTE 279
Query: 184 LISISNDGRLCSWSLEMLSSPQETRDLQYNNK-QTKN-LAVLSLAFPQNDVNNFVVGCED 241
S S DG++ W + +S P E + + K Q +N L +SL F F+VG E
Sbjct: 280 CFSASTDGQVMWWDIRKISEPIEVVIMDISRKEQLENALGAISLEFESTLPTKFMVGTEQ 339
Query: 242 GNVYSACRHGN-KAGNVEC-YEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNI 299
G V S R +A + C + GH GP+ L Q + + +LT DW+ ++W+
Sbjct: 340 GIVISCNRKAKTQAEKIVCTFYGHHGPIYAL-----QRNPFYPKNFLTVG-DWTARIWSE 393
Query: 300 KENKPVHSFNEFR-DYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGA 358
+ + ++ Y+ D WSP+ PA+F T ++ G +D+W+L PA S V
Sbjct: 394 DSRESSIMWTKYHMAYLSDGAWSPVRPAVFFTTKMDGTLDIWDLVFKQCDPALSLKVCDD 453
Query: 359 PALS-RVTWTPNGTQLCVGDEKGAITMFDV 387
P RV NG + G E G T+ +V
Sbjct: 454 PLFCLRVQ--DNGCLIACGSELGTTTLLEV 481
>UNIPROTKB|E1BPM9 [details] [associations]
symbol:DNAI2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005858 "axonemal dynein
complex" evidence=IEA] [GO:0003777 "microtubule motor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0042384 GO:GO:0003777
GO:GO:0035085 GeneTree:ENSGT00690000101848 GO:GO:0005858
OMA:HPDGNRK EMBL:DAAA02049588 EMBL:DAAA02049589 IPI:IPI00703972
Ensembl:ENSBTAT00000022242 Uniprot:E1BPM9
Length = 616
Score = 295 (108.9 bits), Expect = 2.6e-25, P = 2.6e-25
Identities = 97/361 (26%), Positives = 156/361 (43%)
Query: 44 DEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYH-RN-KEAPNEPDGVCLI 101
DE S K F D + K R T++ W L +Y N + AP I
Sbjct: 144 DEAPSAKT--INVFRDPQEIK-RPATHVSWHPDGNRKLAVAYSCLNFQRAPEGMSNESYI 200
Query: 102 WNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPL 161
W+ SP+++ + + +++L G Y+GQI WDTR K + V
Sbjct: 201 WDLENPNRPEITLKP-SSPLVTLEYNPKDSHVLLAGCYNGQIACWDTR--KGSLVAELST 257
Query: 162 SVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQ-TKN- 219
+H PV+ + ++ S S DG++ W + LS P E + K+ +N
Sbjct: 258 IEFSHRDPVYGTIWLQSKTGTECFSASTDGQVMWWDIRKLSEPTEVVIMDITKKEHLENA 317
Query: 220 LAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNK-AGNVEC-YEGHEGPVVGLSSHRAQG 277
L +SL F F+VG E G V S R G A + C + GH GP+ L Q
Sbjct: 318 LGAISLEFESTLPTKFMVGTEQGVVISCNRKGKTPAEKIVCTFSGHHGPIYAL-----QR 372
Query: 278 HIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFR-DYVMDVQWSPINPALFATVEVAGR 336
+ + +LT DW+ ++W+ + + ++ Y+ D WSP+ PA+F T ++ G
Sbjct: 373 NPFYPKNFLTVG-DWTARIWSEDSRESSIMWTKYHMAYLTDAAWSPVRPAVFFTTKMDGT 431
Query: 337 VDLWNLNLDTEVPATSA-IVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGEVGIACL 395
+D+W+ PA S + + A RV NG + G + G T+ +V G+ L
Sbjct: 432 LDIWDFVFKQCDPALSLKVCDEALFCLRVQ--DNGCFIACGSQLGTTTLLEVSN-GLCTL 488
Query: 396 K 396
+
Sbjct: 489 Q 489
>RGD|1359602 [details] [associations]
symbol:Dnai2 "dynein, axonemal, intermediate chain 2"
species:10116 "Rattus norvegicus" [GO:0003777 "microtubule motor
activity" evidence=IEA;ISO] [GO:0005858 "axonemal dynein complex"
evidence=IEA;ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IEA;ISO] [GO:0042384 "cilium
assembly" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1359602 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0030030 GO:GO:0005874 GO:GO:0035085
GO:GO:0030286 GO:GO:0003774 GeneTree:ENSGT00690000101848 CTD:64446
eggNOG:NOG284872 HOGENOM:HOG000259651 HOVERGEN:HBG013035 KO:K11143
OMA:HPDGNRK EMBL:BC081920 IPI:IPI00372973 RefSeq:NP_001007727.1
UniGene:Rn.137787 ProteinModelPortal:Q66HC9 STRING:Q66HC9
PRIDE:Q66HC9 Ensembl:ENSRNOT00000038852 GeneID:360654
KEGG:rno:360654 InParanoid:Q66HC9 NextBio:673627
ArrayExpress:Q66HC9 Genevestigator:Q66HC9 Uniprot:Q66HC9
Length = 619
Score = 291 (107.5 bits), Expect = 7.2e-25, P = 7.2e-25
Identities = 89/330 (26%), Positives = 145/330 (43%)
Query: 66 RNVTYMDWSTQHPELLLASYH--RNKEAPNEPDGVCLIWNXXXXXXXXXXXXXCQSPVLS 123
R T++ W + L +Y + + +P IW+ SP+++
Sbjct: 163 RTATHLSWHPDGNKKLAVAYSCLQFQRSPMGMSHDSYIWDLENPNRPEIALKP-SSPLIT 221
Query: 124 CCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIGTQNAHN 183
+ + +++LGG Y+GQI WDTR K + V +H PV+ + ++
Sbjct: 222 LEYNPKDSHVLLGGCYNGQIACWDTR--KGSLVAELSTIEFSHRDPVYGTIWLQSKTGTE 279
Query: 184 LISISNDGRLCSWSLEMLSSPQETRDLQYNNK-QTKN-LAVLSLAFPQNDVNNFVVGCED 241
S S DG++ W + +S P E + K Q +N L +SL F F+VG E
Sbjct: 280 CFSASTDGQVMWWDIRKISEPTEVVIMDITRKEQLENALGAISLEFESTLPTKFMVGTEQ 339
Query: 242 GNVYSACRHGNK-AGNVEC-YEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNI 299
G V S R A + C + GH GP+ L Q + + +LT DW+ ++W+
Sbjct: 340 GIVISCNRKAKTPAEKIVCTFSGHHGPIYAL-----QRNPFYPKNFLTVG-DWAARIWSE 393
Query: 300 KENKPVHSFNEFR-DYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGA 358
+ + + + Y+ D WSP+ PA+F T ++ G +D+W+L PA S V
Sbjct: 394 ESRESSIMWTRYHMAYLSDGAWSPVRPAVFFTTKMDGTLDIWDLVFKQCDPALSLKVCDD 453
Query: 359 PALS-RVTWTPNGTQLCVGDEKGAITMFDV 387
P RV T G + G E G T+ +V
Sbjct: 454 PLFCLRVQDT--GCLIACGSELGTTTLLEV 481
>UNIPROTKB|Q9GZS0 [details] [associations]
symbol:DNAI2 "Dynein intermediate chain 2, axonemal"
species:9606 "Homo sapiens" [GO:0005874 "microtubule" evidence=IEA]
[GO:0003777 "microtubule motor activity" evidence=IMP] [GO:0005858
"axonemal dynein complex" evidence=IMP] [GO:0035085 "cilium
axoneme" evidence=IMP] [GO:0042384 "cilium assembly" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
EMBL:CH471099 GO:GO:0042384 GO:GO:0005874 GO:GO:0003777
GO:GO:0035085 EMBL:AC103809 Orphanet:244 GO:GO:0005858
Orphanet:98861 EMBL:AF250288 EMBL:AF253097 EMBL:AF253087
EMBL:AF253088 EMBL:AF253089 EMBL:AF260782 EMBL:AF253090
EMBL:AF253091 EMBL:AF253092 EMBL:AF253093 EMBL:AF253094
EMBL:AF253095 EMBL:AF253096 EMBL:AJ295276 EMBL:BC039582
EMBL:AL137526 IPI:IPI00304288 IPI:IPI00789929 PIR:T46370
RefSeq:NP_001166281.1 RefSeq:NP_075462.3 UniGene:Hs.147472
ProteinModelPortal:Q9GZS0 SMR:Q9GZS0 STRING:Q9GZS0
PhosphoSite:Q9GZS0 DMDM:311033373 PRIDE:Q9GZS0 DNASU:64446
Ensembl:ENST00000311014 Ensembl:ENST00000446837
Ensembl:ENST00000582036 GeneID:64446 KEGG:hsa:64446 UCSC:uc002jkf.3
UCSC:uc002jkg.3 CTD:64446 GeneCards:GC17P072292 H-InvDB:HIX0027346
H-InvDB:HIX0202470 HGNC:HGNC:18744 HPA:CAB006245 MIM:605483
MIM:612444 neXtProt:NX_Q9GZS0 PharmGKB:PA38669 eggNOG:NOG284872
HOGENOM:HOG000259651 HOVERGEN:HBG013035 InParanoid:Q9GZS0 KO:K11143
OMA:HPDGNRK OrthoDB:EOG45TCN2 PhylomeDB:Q9GZS0 GenomeRNAi:64446
NextBio:66463 ArrayExpress:Q9GZS0 Bgee:Q9GZS0 CleanEx:HS_DNAI2
Genevestigator:Q9GZS0 GermOnline:ENSG00000171595 Uniprot:Q9GZS0
Length = 605
Score = 288 (106.4 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 89/339 (26%), Positives = 146/339 (43%)
Query: 66 RNVTYMDWSTQHPELLLASYH--RNKEAPNEPDGVCLIWNXXXXXXXXXXXXXCQSPVLS 123
R T++ W L +Y + AP IW+ SP+++
Sbjct: 163 RAATHLSWHPDGNRKLAVAYSCLDFQRAPVGMSSDSYIWDLENPNKPELALKP-SSPLVT 221
Query: 124 CCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIGTQNAHN 183
F + +++LGG Y+GQI WDTR K + V +H PV+ + ++
Sbjct: 222 LEFNPKDSHVLLGGCYNGQIACWDTR--KGSLVAELSTIESSHRDPVYGTIWLQSKTGTE 279
Query: 184 LISISNDGRLCSWSLEMLSSPQETRDLQYNNK-QTKN-LAVLSLAFPQNDVNNFVVGCED 241
S S DG++ W + +S P E L K Q +N L +SL F F+VG E
Sbjct: 280 CFSASTDGQVMWWDIRKMSEPTEVVILDITKKEQLENALGAISLEFESTLPTKFMVGTEQ 339
Query: 242 GNVYSACRHGN-KAGNVEC-YEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNI 299
G V S R A + C + GH GP+ L Q + + +LT DW+ ++W+
Sbjct: 340 GIVISCNRKAKTSAEKIVCTFPGHHGPIYAL-----QRNPFYPKNFLTVG-DWTARIWSE 393
Query: 300 KENKPVHSFNEFR-DYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSA-IVEG 357
+ + ++ Y+ D WSP+ P +F T + G +D+W+ + P S + +
Sbjct: 394 DSRESSIMWTKYHMAYLTDAAWSPVRPTVFFTTRMDGTLDIWDFMFEQCDPTLSLKVCDE 453
Query: 358 APALSRVTWTPNGTQLCVGDEKGAITMFDVGEVGIACLK 396
A RV NG + G + G T+ +V G++ L+
Sbjct: 454 ALFCLRVQ--DNGCLIACGSQLGTTTLLEVSP-GLSTLQ 489
>ZFIN|ZDB-GENE-070410-46 [details] [associations]
symbol:zgc:162235 "zgc:162235" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-070410-46 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00690000101848 EMBL:AL954682 EMBL:CU459056
IPI:IPI00495757 Ensembl:ENSDART00000009319 ArrayExpress:F1QXZ0
Bgee:F1QXZ0 Uniprot:F1QXZ0
Length = 555
Score = 282 (104.3 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 93/338 (27%), Positives = 152/338 (44%)
Query: 59 DEKWSKNRNVTYMDWSTQHPELLLASYH--RNKEAPNEPDGVCLIWNXXXXXXXXXXXXX 116
D K K R T + W L +Y + P IWN
Sbjct: 151 DPKKEK-RAATSLSWHPVDNHKLAVAYSCVEFQRGPKNMSSDSYIWNIENNKQPEMTLKS 209
Query: 117 CQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTH--PVFCMS 174
SP++ + N +++GG+Y+GQI WDTR + PV +S + H+H PV+ +
Sbjct: 210 V-SPLVCLEYNLKNISILIGGSYNGQIGYWDTRSGSQ-PVQ---ISAIEHSHKDPVYKVI 264
Query: 175 VIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNL----AVLSLAFPQN 230
+ T+ S S DG++ W + +S P T+ L + ++KNL S+ F N
Sbjct: 265 WLQTKIGTEAFSASTDGQVLFWDIRNMSEP--TKQLILDPAKSKNLNNAFGAFSMEF-DN 321
Query: 231 DVNNFVVGCEDGNVYSACRHGNKAGN-VEC-YEGHEGPVVGLSSHRAQGHIDFSHLYLTS 288
+ F+VG E G V R + C Y GH GPV + Q + F +LT
Sbjct: 322 TMPKFLVGTEQGLVVLCNRKLETTDEPIVCTYSGHLGPV-----YAVQRNPFFPKYFLTV 376
Query: 289 SYDWSVKLWN--IKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDT 346
+ DW+ ++W+ I+ + + S ++MD WSP+ PA+F TV++ G +D+W++ L
Sbjct: 377 A-DWTARIWSEDIRLSS-IMSTKYHTSHLMDGCWSPVRPAVFFTVKMDGTLDVWDILLKQ 434
Query: 347 EVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITM 384
+ P S V S + + +C G + G +T+
Sbjct: 435 KDPVLSLKVCDETLYS-IRVKNDSPLMCCGSQLGTVTL 471
>UNIPROTKB|F1NQ70 [details] [associations]
symbol:DNAI2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003777 "microtubule motor activity" evidence=IEA]
[GO:0005858 "axonemal dynein complex" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0042384 "cilium assembly"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0003777 GO:GO:0035085
GeneTree:ENSGT00690000101848 GO:GO:0005858 OMA:HPDGNRK
EMBL:AADN02030096 IPI:IPI00603536 Ensembl:ENSGALT00000007161
Uniprot:F1NQ70
Length = 519
Score = 280 (103.6 bits), Expect = 5.2e-23, P = 5.2e-23
Identities = 77/284 (27%), Positives = 135/284 (47%)
Query: 119 SPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIGT 178
SP++S + + ++++GG Y+GQ+ WDTR + PV + + +H PV+ + +
Sbjct: 212 SPLVSLEYNPKDSHILVGGCYNGQMAYWDTR-KGGLPVEVSTVEA-SHRDPVYGAIWLQS 269
Query: 179 QNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQT-KN-LAVLSLAFPQNDVNNFV 236
+ S S DG++ W + LS P E L K+ +N L +L F F+
Sbjct: 270 KTGTECFSASTDGQVLWWDIRKLSEPTEVLILDITRKELLENALGASTLEFEPTMPTKFM 329
Query: 237 VGCEDGNVYSACRHGNKAGN---VECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWS 293
VG E G V AC K Y GH GPV L+ + F ++LT DW+
Sbjct: 330 VGTEQGIVI-ACNRKAKTPPEKITSTYSGHHGPVYALARNPF-----FPKIFLTVG-DWT 382
Query: 294 VKLWNIKENKPVHSFNEFR-DYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATS 352
++W+ + + + ++ Y+ D WS + P++F T ++ G +D+W++ P+ S
Sbjct: 383 ARIWSEETKESSIMWTKYHLCYLTDGCWSTVRPSVFFTTKMDGTLDIWDILFKQNNPSLS 442
Query: 353 AIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGEVGIACLK 396
+ P LS + NG + G + G IT+ ++ G+ L+
Sbjct: 443 LKICDEP-LSSLRLQDNGCVVGCGSKLGTITLLEISS-GLCTLQ 484
>UNIPROTKB|P27766 [details] [associations]
symbol:ODA6 "Dynein, 70 kDa intermediate chain, flagellar
outer arm" species:3055 "Chlamydomonas reinhardtii" [GO:0031514
"motile cilium" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005929 GO:GO:0009434 GO:GO:0005874 GO:GO:0030286
GO:GO:0003774 GO:GO:0035086 eggNOG:NOG284872 EMBL:X55382
EMBL:X68128 PIR:S25521 ProteinModelPortal:P27766 IntAct:P27766
STRING:P27766 Uniprot:P27766
Length = 567
Score = 272 (100.8 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 82/335 (24%), Positives = 148/335 (44%)
Query: 66 RNVTYMDWSTQH--PELLLASYHRNKEAPNEPDGVCL---IWNXXXXXXXXXXXXXCQSP 120
R+ +Y++W P++++A + + +P G+ L IW+ P
Sbjct: 162 RSASYVNWHPDGSVPKVVVA--YSILQFQQQPAGMPLSSYIWDVNNPNTPEYEMV----P 215
Query: 121 VLSCCFAKFN---PYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIG 177
C AKFN L+ G Y+GQ+ +D R + PV TP+ + +H P++ + +
Sbjct: 216 TSQICCAKFNLKDNNLVGAGQYNGQLAYFDVR-KGNGPVEATPIDI-SHRDPIYDFAWLQ 273
Query: 178 TQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLSLAFPQN-DVNNFV 236
++ +++S DG + W L ++ E L+ N +T + + L + N NF+
Sbjct: 274 SKTGTECMTVSTDGNVLWWDLRKMNECVENMPLKEKNSET-TVGGVCLEYDTNAGPTNFM 332
Query: 237 VGCEDGNVYSACRHG-NKAGNVE-CYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSV 294
VG E G ++S R N V+ GH GP+ GL + F+ Y S DW+
Sbjct: 333 VGTEQGQIFSCNRKAKNPVDRVKYVLSGHHGPIYGLRRN------PFNSKYFLSIGDWTA 386
Query: 295 KLW--NIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATS 352
++W + P+ + Y+ WSP P +F T+++ G +D+W+L P +
Sbjct: 387 RVWVEDTAVKTPILTTKYHPTYLTGGTWSPSRPGVFFTIKMDGAMDVWDLYYKHNEPTLT 446
Query: 353 AIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDV 387
V AL+ +G + VG G ++ +
Sbjct: 447 VQVSDL-ALTAFAVQESGGTVAVGTSDGCTSVLQL 480
>MGI|MGI:2385328 [details] [associations]
symbol:Wdr78 "WD repeat domain 78" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2385328 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GeneTree:ENSGT00690000102094 EMBL:AL844176
EMBL:AK030997 EMBL:BC028975 EMBL:BC034130 IPI:IPI00890251
RefSeq:NP_666366.4 UniGene:Mm.374877 ProteinModelPortal:E9PYY5
SMR:E9PYY5 Ensembl:ENSMUST00000036451 Ensembl:ENSMUST00000036557
Ensembl:ENSMUST00000106868 Ensembl:ENSMUST00000116316 GeneID:242584
KEGG:mmu:242584 CTD:79819 HOGENOM:HOG000147824 HOVERGEN:HBG069393
OMA:FYPTTYV NextBio:385424 Bgee:E9PYY5 Uniprot:E9PYY5
Length = 807
Score = 202 (76.2 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 61/228 (26%), Positives = 99/228 (43%)
Query: 177 GTQNAHNLISISNDGRLCSW---------SLEMLSSPQETRDLQYNNKQTKNLAVLS--- 224
G L+SIS DGR+ W L L T + K+ K A++S
Sbjct: 561 GDDKREILVSISADGRISKWIIRKGLDCHDLMRLKRTTATGGKKGGEKEKKGEALISRQA 620
Query: 225 ----LAFPQNDVNNFVVGCEDGNVYS-ACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHI 279
AF D N ++ G E+G ++ +C + + +E Y GH+GPV ++ +
Sbjct: 621 PGMCFAFHPKDTNIYLAGTEEGLIHKCSCSYNEQY--LETYRGHKGPV-----YKVTWNP 673
Query: 280 DFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDL 339
++L+ S DW V +W+ KP SF V DV WSP + +FA RV++
Sbjct: 674 FCPDVFLSCSADWGVMIWHQDTVKPFLSFYPTTYVVYDVSWSPKSAYIFAAAN-ENRVEI 732
Query: 340 WNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDV 387
W+L + T P + + V + L VGD G + ++++
Sbjct: 733 WDLQISTLDPLIVNVANPGIKFTTVLFAKETDCLLVGDSDGQVAVYEL 780
Score = 107 (42.7 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 39/173 (22%), Positives = 73/173 (42%)
Query: 32 QLPQDLQFDMTGDEKSSTKLSFCRQF-FDEKWSKNRNVTYMDWSTQHPELLLASYHRNKE 90
++ +L+ ++ E+S+ + R + F +K NV+ + W+ +P+LL Y N
Sbjct: 411 EVEMELELEIA-TEQSTIPANLERLWSFSCDLTKGLNVSSLSWNKANPDLLAVGYG-NFG 468
Query: 91 APNEPDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRV 150
+ G+ W+ V S F+ +P L+ G ++G + +++ +
Sbjct: 469 FREQKKGMACCWSIKNPMWPERIYQSSYG-VTSVDFSNSSPNLLAVGYHNGTVAIYNVQS 527
Query: 151 QKKTPVHRTPLSVMAHTHPVFCMSVI-------GTQNAHNLISISNDGRLCSW 196
PV + S H PV+ + I G L+SIS DGR+ W
Sbjct: 528 SHNIPVLDSSESPQKHLGPVWQVQWIEQDRGTTGDDKREILVSISADGRISKW 580
>UNIPROTKB|E7EQL5 [details] [associations]
symbol:DYNC1I2 "Cytoplasmic dynein 1 intermediate chain 2"
species:9606 "Homo sapiens" [GO:0005868 "cytoplasmic dynein
complex" evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] InterPro:IPR025956 Pfam:PF11540 GO:GO:0007018
EMBL:AC068039 GO:GO:0005868 EMBL:AC064826 HGNC:HGNC:2964
ChiTaRS:DYNC1I2 IPI:IPI00917978 ProteinModelPortal:E7EQL5
SMR:E7EQL5 PRIDE:E7EQL5 Ensembl:ENST00000435234 ArrayExpress:E7EQL5
Bgee:E7EQL5 Uniprot:E7EQL5
Length = 305
Score = 227 (85.0 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 40/69 (57%), Positives = 57/69 (82%)
Query: 35 QDLQFDMTGDEKSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNE 94
+DL+ D G+ ++ KLS RQFFDE+WSK+R V+ +DWS+Q+PELL+ASY+ N++AP+E
Sbjct: 224 RDLE-DKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHE 282
Query: 95 PDGVCLIWN 103
PDGV L+WN
Sbjct: 283 PDGVALVWN 291
>ZFIN|ZDB-GENE-070112-1302 [details] [associations]
symbol:zgc:158666 "zgc:158666" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-070112-1302 Gene3D:2.130.10.10
SUPFAM:SSF50978 GeneTree:ENSGT00690000102094 OMA:AINKYEA
EMBL:CU062650 EMBL:CR812470 IPI:IPI00829212
Ensembl:ENSDART00000080431 Bgee:F1QBY7 Uniprot:F1QBY7
Length = 660
Score = 246 (91.7 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 89/369 (24%), Positives = 167/369 (45%)
Query: 32 QLPQD-LQFDMTGDE---KSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELL---LAS 84
++ QD + F+ DE + T L + +D+ +K +VT + W+ + +L L S
Sbjct: 267 EVAQDFMYFEDAADEFRGEKGTLLPLWKFQYDK--AKGLSVTALCWNHIYSDLFAVGLGS 324
Query: 85 YHRNKEAPNEPDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIV 144
Y E + G+ L + S V+ + YL+ G Y G +
Sbjct: 325 Y----EFTQQERGMLLFYTLKNPSFPEFIFNT-DSGVMCVDIHEQLSYLVAVGLYDGCVS 379
Query: 145 LWDTRVQKKTPVHRTPLSVMAHTHPVFCMS--VIGTQNAHNLISISNDGRLCSWSL---- 198
++D R + P++ + S HT V+ + + HN S+S DGR+ SW+L
Sbjct: 380 VYDLRKKSDQPMYNSIASSGKHTGAVWQVKWQKDDLDSNHNFFSVSTDGRVVSWTLVKHE 439
Query: 199 ----EMLSSPQETRDLQYNNKQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKA 254
+++ P + + + K A SL F + ++F+VG E G ++ ++ +
Sbjct: 440 IVFTDIIKLPPVDK-VPDDLKNVVATAGTSLDFHKQKDHHFLVGTEAGKIHKGSKYYSSK 498
Query: 255 GNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDY 314
+E Y+ H + +S R +++++ +DW VK+W+ N PV +F E +
Sbjct: 499 F-LEMYDAH---FMTVSCVRWNPF--HPNVFISCGWDWMVKIWDHTINSPVFTF-ELKSS 551
Query: 315 VMDVQWSPINPALFATVEVAGRVDLWNLNLDT-EVPATSAIVEGAPALSRVTWTPNGTQL 373
V DV WSP + +FA V G+V +++L+++ E +V L + + P +
Sbjct: 552 VTDVAWSPYSSTVFAAVTADGKVHVFDLSINKYEALCQQKVVSKKTRLLHIEFNPVHPII 611
Query: 374 CVGDEKGAI 382
VGD++G +
Sbjct: 612 IVGDDRGRV 620
>UNIPROTKB|Q32KS2 [details] [associations]
symbol:DNAI1 "Dynein intermediate chain 1, axonemal"
species:9913 "Bos taurus" [GO:0003351 "epithelial cilium movement"
evidence=IEA] [GO:0030286 "dynein complex" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005874 GO:GO:0030286 GO:GO:0003774 EMBL:BC109952
IPI:IPI00710794 RefSeq:NP_001033231.1 UniGene:Bt.50872
ProteinModelPortal:Q32KS2 STRING:Q32KS2 PRIDE:Q32KS2
Ensembl:ENSBTAT00000011254 GeneID:524709 KEGG:bta:524709 CTD:27019
eggNOG:NOG145991 GeneTree:ENSGT00690000102094 HOGENOM:HOG000231705
HOVERGEN:HBG005545 InParanoid:Q32KS2 KO:K10409 OMA:AINKYEA
OrthoDB:EOG4VDPXX NextBio:20874025 GO:GO:0003351 Uniprot:Q32KS2
Length = 702
Score = 243 (90.6 bits), Expect = 8.5e-18, P = 8.5e-18
Identities = 80/344 (23%), Positives = 162/344 (47%)
Query: 56 QFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNXXXXXXXXXXXX 115
+F ++K +K VT + W+ ++ +L H + + + G+ L+++
Sbjct: 326 KFQNDK-AKRLAVTALCWNPKYNDLFAVG-HGSYDFMKQSRGMLLLYSMKNPSFPEYIFS 383
Query: 116 XCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSV 175
+S ++ +PYL++ G Y G + +++ + P R+ HT PV+ +
Sbjct: 384 S-ESGIMCLDMHVDHPYLVVVGHYDGNVAIYNLKKPHSQPSFRSSAKSGKHTDPVWQVRW 442
Query: 176 IGTQNAHNL--ISISNDGRLCSWSL---EMLSSPQETRDLQYNNKQTKNLAVLSL----- 225
HNL S+S+DGR+ SW+L E++ + + L+ T+ L L +
Sbjct: 443 QKDDMDHNLNFFSVSSDGRIVSWTLVKSELVHT--DVIKLKVEGSTTEGLEGLQIHTVGC 500
Query: 226 --AFP-QNDVNN-FVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDF 281
AF +++ F+VG E+G +Y C + ++ Y+ H V +S + H
Sbjct: 501 GTAFDFHREIDYLFLVGTEEGKIYK-CSKSYSSQFLDTYDAHNMAVDAVSWNPY--H--- 554
Query: 282 SHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWN 341
+ ++++ S DW+VK+W+ P+ + + V DV W+P + +FA V G+ +++
Sbjct: 555 TKVFMSCSSDWTVKIWDHTIKTPMFIY-DLNSAVGDVAWAPYSSTVFAAVTTNGKTHVFD 613
Query: 342 LNLDT-EVPATSAIV-EGAPALSRVTWTPNGTQLCVGDEKGAIT 383
L+++ E +V + L+ V + P + VGD++G +T
Sbjct: 614 LSINKYEAICNQPVVAKKKNKLTHVQFNPIHPIIIVGDDRGHVT 657
>UNIPROTKB|F1PBZ6 [details] [associations]
symbol:DNAI1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003351 "epithelial cilium movement"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00690000102094 GO:GO:0003351 EMBL:AAEX03007945
EMBL:AAEX03007943 EMBL:AAEX03007944 Ensembl:ENSCAFT00000003051
Uniprot:F1PBZ6
Length = 688
Score = 233 (87.1 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 80/343 (23%), Positives = 158/343 (46%)
Query: 56 QFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNXXXXXXXXXXXX 115
+F ++K +K VT + W+ ++ +L H + + + G+ L+++
Sbjct: 321 KFQNDK-AKRLAVTALCWNPKYNDLFAVG-HGSYDFMKQSQGMLLLYSMKNPSFPEYIFS 378
Query: 116 XCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCM-- 173
+S ++ +PYL++ G Y G + +++ + P R+ HT PV+ +
Sbjct: 379 S-ESGIMCLDMHVDHPYLVVVGHYDGNVAIYNLKKPHSQPSFRSSAKSGKHTDPVWQVRW 437
Query: 174 SVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRD---LQYNNKQTKNLAVLSL----- 225
N N S+S+DGR+ SW+L L S D L+ T L L L
Sbjct: 438 QKDDMDNNLNFFSVSSDGRIVSWTL--LKSELVHTDVIKLKAEGSTTDGLDGLQLHTMGC 495
Query: 226 --AFP-QNDVNN-FVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDF 281
AF +++ F+VG E+G +Y C + ++ Y+ H V +S + H
Sbjct: 496 GTAFDFHKEIDYMFLVGTEEGKIYK-CSKSYSSKFLDTYDAHNMAVDAVSW--SPYH--- 549
Query: 282 SHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWN 341
+ ++++ S DW+VK+W+ P+ + + V DV W+P + +FA V G+ +++
Sbjct: 550 TKVFMSCSSDWTVKIWDHTIKTPMFIY-DLNSAVGDVAWAPYSSTVFAAVTTNGKTHVFD 608
Query: 342 LNLDT-EVPATSAIV-EGAPALSRVTWTPNGTQLCVGDEKGAI 382
L+++ E + +V + ++ V + P + VGD++G +
Sbjct: 609 LSINKYEAICSQPVVTKKKNKITHVQFNPIHPIIIVGDDRGHV 651
>RGD|1565671 [details] [associations]
symbol:Dnai1 "dynein, axonemal, intermediate chain 1"
species:10116 "Rattus norvegicus" [GO:0003351 "epithelial cilium
movement" evidence=IEA;ISO] [GO:0003774 "motor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005874
"microtubule" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0030286 "dynein complex" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1565671 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005874
GO:GO:0035085 GO:GO:0030286 GO:GO:0003774 CTD:27019
eggNOG:NOG145991 GeneTree:ENSGT00690000102094 HOGENOM:HOG000231705
HOVERGEN:HBG005545 KO:K10409 OrthoDB:EOG4VDPXX GO:GO:0003351
EMBL:BC083662 IPI:IPI00200420 RefSeq:NP_001019513.1
UniGene:Rn.93980 ProteinModelPortal:Q5XIL8 STRING:Q5XIL8
PRIDE:Q5XIL8 Ensembl:ENSRNOT00000067657 GeneID:500442
KEGG:rno:500442 UCSC:RGD:1565671 InParanoid:Q5XIL8 NextBio:706209
ArrayExpress:Q5XIL8 Genevestigator:Q5XIL8
GermOnline:ENSRNOG00000013734 Uniprot:Q5XIL8
Length = 705
Score = 225 (84.3 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 76/342 (22%), Positives = 158/342 (46%)
Query: 56 QFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNXXXXXXXXXXXX 115
+F ++K +K VT + W+ ++ +L H + + + G+ L+++
Sbjct: 329 KFQNDK-AKRLAVTALCWNPKYKDLFAVG-HGSYDFMKQSRGMLLLYSMKNPSFPEYMFS 386
Query: 116 XCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSV 175
+S ++ +PYL++ G Y G + +++ + P R+ HT PV+ +
Sbjct: 387 S-ESGIMCLDMHMDHPYLVVVGYYDGNVAIYNLKKPHSQPCFRSTSKSGKHTDPVWQVKW 445
Query: 176 IGTQNAHNL--ISISNDGRLCSWSL---EMLSSPQ-ETRDLQYNNKQTKNLAVLSL---- 225
HNL S+S+DGR+ SW+L E++ + +D + + L + ++
Sbjct: 446 QKDDMDHNLNFFSVSSDGRIVSWTLVKSELVHIDVIKLKDEGSTTEIPEGLQLHTVGCGT 505
Query: 226 AFP-QNDVNN-FVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSH 283
AF +++ F+VG E+G +Y C + ++ Y+ H V + + +
Sbjct: 506 AFDFHKEIDYLFLVGTEEGKIYK-CSKSYSSQFLDTYDAHNMAVDAVLWNPYHARV---- 560
Query: 284 LYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLN 343
+++ S DW+VK+W+ P+ + + V DV W+P + +FA V G+ +++L
Sbjct: 561 -FISCSSDWTVKIWDHAIKTPMFIY-DLNAAVGDVAWAPYSSTVFAAVTTDGKAHVFDLA 618
Query: 344 LDT-EVPATSAIV-EGAPALSRVTWTPNGTQLCVGDEKGAIT 383
++ E +V + ++ V + P + VGD++G IT
Sbjct: 619 VNKYEAICNQPVVAKKKNKITHVQFNPIHPIIIVGDDRGHIT 660
>MGI|MGI:1916172 [details] [associations]
symbol:Dnaic1 "dynein, axonemal, intermediate chain 1"
species:10090 "Mus musculus" [GO:0003351 "epithelial cilium
movement" evidence=IMP] [GO:0003774 "motor activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005929
"cilium" evidence=IEA] [GO:0030286 "dynein complex" evidence=IEA]
[GO:0042995 "cell projection" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1916172 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005874
GO:GO:0035085 GO:GO:0030286 GO:GO:0003774 eggNOG:NOG145991
GeneTree:ENSGT00690000102094 HOGENOM:HOG000231705
HOVERGEN:HBG005545 KO:K10409 OMA:AINKYEA OrthoDB:EOG4VDPXX
GO:GO:0003351 EMBL:AK030213 EMBL:AK047808 IPI:IPI00309604
RefSeq:NP_780347.2 UniGene:Mm.79127 ProteinModelPortal:Q8C0M8
SMR:Q8C0M8 STRING:Q8C0M8 PhosphoSite:Q8C0M8 PaxDb:Q8C0M8
PRIDE:Q8C0M8 Ensembl:ENSMUST00000102963 GeneID:68922 KEGG:mmu:68922
CTD:68922 InParanoid:Q8C0M8 NextBio:328193 Bgee:Q8C0M8
CleanEx:MM_DNAIC1 Genevestigator:Q8C0M8
GermOnline:ENSMUSG00000061322 Uniprot:Q8C0M8
Length = 701
Score = 222 (83.2 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 81/366 (22%), Positives = 164/366 (44%)
Query: 35 QDLQF-DMTGDE---KSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKE 90
QD ++ + T DE + T L + F ++K +K VT + W+ ++ +L H + +
Sbjct: 301 QDFKYYEDTADEYRDQEGTLLPLWK-FQNDK-AKRLAVTALCWNPKYKDLFAVG-HGSYD 357
Query: 91 APNEPDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRV 150
+ G+ L+++ +S ++ +PYL++ G Y G + +++ +
Sbjct: 358 FMKQSRGMLLLYSMKNPSFPEYMFSS-ESGIMCLDVHVDHPYLVVVGYYDGNVAIYNLKK 416
Query: 151 QKKTPVHRTPLSVMAHTHPVFCMSVIGTQNAHNL--ISISNDGRLCSWSL--------EM 200
P R+ HT PV+ + HNL S+S+DGR+ SW+L ++
Sbjct: 417 PHSQPCFRSTSKSGKHTDPVWQVKWQKDDMDHNLNFFSVSSDGRIVSWTLVKSELVHIDI 476
Query: 201 LSSPQETRDLQYNNKQTKNLAVLSLAFP-QNDVNN-FVVGCEDGNVYSACRHGNKAGNVE 258
+ E + + AF +++ F+VG E+G +Y C + ++
Sbjct: 477 IKLKTEGSTTEIPEGLQLHTVGCGTAFDFHKEIDYMFLVGTEEGKIYK-CSKSYSSQFLD 535
Query: 259 CYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDV 318
Y+ H V + + H + ++++ S DW+VK+W+ P+ + + V DV
Sbjct: 536 TYDAHNMAVDAVLWNPY--H---TKVFMSCSSDWTVKIWDHTIKTPMFIY-DLNSAVGDV 589
Query: 319 QWSPINPALFATVEVAGRVDLWNLNLDT-EVPATSAIV-EGAPALSRVTWTPNGTQLCVG 376
W+P + +FA V G+ +++L ++ E +V + ++ V + P + VG
Sbjct: 590 AWAPYSSTVFAAVTTDGKAHVFDLAVNKYEAICNQPVVAKKKNKITHVQFNPIHPIIIVG 649
Query: 377 DEKGAI 382
D++G I
Sbjct: 650 DDRGHI 655
>ZFIN|ZDB-GENE-070928-9 [details] [associations]
symbol:dync2i1 "dynein, cytoplasmic 2, intermediate
chain 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005622 "intracellular"
evidence=IMP] [GO:0042073 "intraflagellar transport" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-070928-9
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0042073
GeneTree:ENSGT00690000102094 HOGENOM:HOG000232095
HOVERGEN:HBG058945 OMA:PVYCLEF EMBL:CU466275 EMBL:BC152526
IPI:IPI00511565 RefSeq:NP_001099160.1 UniGene:Dr.82496
Ensembl:ENSDART00000080347 GeneID:794361 KEGG:dre:794361 CTD:794361
NextBio:20931822 Uniprot:A7MD87
Length = 501
Score = 147 (56.8 bits), Expect = 9.9e-14, Sum P(2) = 9.9e-14
Identities = 54/227 (23%), Positives = 102/227 (44%)
Query: 39 FDMTGDEKS-STKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAP--NEP 95
F++ +E++ S + Q D + K+ VT + W+ ++ + R + NE
Sbjct: 100 FEVNWEEQNESVSCMYRLQHVDAQ-EKSLQVTSVSWNCTG-SVIACGFGRVDDGDWSNEK 157
Query: 96 DGVCLIWNXXXXXXXXXX---XXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQK 152
VC WN +PV+ CF P ++ GG YSG++V+WDT +
Sbjct: 158 ACVCT-WNVDRQNLNPKRPDVIIDVATPVMCLCFHPVRPSVVAGGLYSGEVVVWDTSRSQ 216
Query: 153 KTPVHRTPLSVMAHTHPVFCMS-VIGTQNAH-NLISISNDGRLCSWSLE------MLSSP 204
+ +T +S H PV+ ++ V G + +++S + GR+ W+++ +LSS
Sbjct: 217 DLILAQTGMSADTHREPVYQINWVPGARRGEFSVLSAGSGGRVLLWTIDGSEAKLLLSSG 276
Query: 205 QET--RDLQYNNKQTKN-----LAVLSLAFPQNDVNNFVVGCEDGNV 244
+ + + +K + V ++A D++ F+VG E G V
Sbjct: 277 YALVRQQMPQSGAASKTRGSLTIGVTAVALSPWDLDTFLVGSEGGLV 323
Score = 105 (42.0 bits), Expect = 9.9e-14, Sum P(2) = 9.9e-14
Identities = 46/181 (25%), Positives = 79/181 (43%)
Query: 220 LAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHE----GPV-VGLSSHR 274
+ V ++A D++ F+VG E G V C ++ +G P+ S
Sbjct: 299 IGVTAVALSPWDLDTFLVGSEGGLVLK-CSFSSETAAAVPSDGESVILRAPMQFSFSPRG 357
Query: 275 AQGH-IDFS--H--LYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFA 329
H + FS H L+++ D L ++ + P+ + YV V+WSP P +FA
Sbjct: 358 GPIHSVHFSPFHRNLFVSVGTDGLAHLHSVLQPCPLLALRVSDSYVFGVRWSPTRPLVFA 417
Query: 330 TVEVAGRVDLWNLNLDTEVP-AT-SAIVEGAPALSRVTWTPNGTQL-CVGDEKGAITMFD 386
V G V +++L + P AT G PA + + P T L VG+ G++ ++
Sbjct: 418 AVTGQGLVQMFDLGRRSLRPVATIDQNAGGQPAYC-LEFNPKHTNLLAVGNADGSVNIWQ 476
Query: 387 V 387
+
Sbjct: 477 L 477
Score = 42 (19.8 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 12/41 (29%), Positives = 24/41 (58%)
Query: 318 VQWSPINPALFATVEVAGRVDLWNLNLD-TEVPAT-SAIVE 356
++++P + L A G V++W L+ + TE A +A++E
Sbjct: 453 LEFNPKHTNLLAVGNADGSVNIWQLSAELTEQGAKETAMLE 493
>UNIPROTKB|Q9UI46 [details] [associations]
symbol:DNAI1 "Dynein intermediate chain 1, axonemal"
species:9606 "Homo sapiens" [GO:0003774 "motor activity"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0030286 "dynein
complex" evidence=IEA] [GO:0003351 "epithelial cilium movement"
evidence=IEA] [GO:0035085 "cilium axoneme" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=TAS] [GO:0005929 "cilium"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005856 GO:GO:0005929 GO:GO:0030030
GO:GO:0005874 GO:GO:0035085 GO:GO:0030286 GO:GO:0003774
Orphanet:244 EMBL:AL160270 CTD:27019 eggNOG:NOG145991
HOGENOM:HOG000231705 HOVERGEN:HBG005545 KO:K10409 OMA:AINKYEA
OrthoDB:EOG4VDPXX GO:GO:0003351 EMBL:AF091619 EMBL:AF190496
EMBL:AF190477 EMBL:AF190478 EMBL:AF190479 EMBL:AF190480
EMBL:AF190481 EMBL:AF190482 EMBL:AF190483 EMBL:AF190484
EMBL:AF190485 EMBL:AF190486 EMBL:AF190487 EMBL:AF190488
EMBL:AF190489 EMBL:AF190490 EMBL:AF190491 EMBL:AF190492
EMBL:AF190493 EMBL:AF190494 EMBL:AF190495 EMBL:BC030583
IPI:IPI00006030 RefSeq:NP_036276.1 UniGene:Hs.112667
ProteinModelPortal:Q9UI46 SMR:Q9UI46 STRING:Q9UI46
PhosphoSite:Q9UI46 DMDM:12643888 PRIDE:Q9UI46 DNASU:27019
Ensembl:ENST00000242317 GeneID:27019 KEGG:hsa:27019 UCSC:uc003zum.3
GeneCards:GC09P034448 HGNC:HGNC:2954 HPA:HPA021649 HPA:HPA021843
MIM:244400 MIM:604366 neXtProt:NX_Q9UI46 Orphanet:98861
PharmGKB:PA27407 InParanoid:Q9UI46 PhylomeDB:Q9UI46 ChiTaRS:DNAI1
GenomeRNAi:27019 NextBio:49540 ArrayExpress:Q9UI46 Bgee:Q9UI46
CleanEx:HS_DNAI1 Genevestigator:Q9UI46 GermOnline:ENSG00000122735
Uniprot:Q9UI46
Length = 699
Score = 201 (75.8 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 82/367 (22%), Positives = 160/367 (43%)
Query: 33 LPQDLQF-DMTGDE---KSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRN 88
+ QD ++ D DE + T L + F ++K +K +VT + W+ ++ +L Y +
Sbjct: 298 IAQDFKYYDDAADEYRDQVGTLLPLWK-FQNDK-AKRLSVTALCWNPKYRDLFAVGYG-S 354
Query: 89 KEAPNEPDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDT 148
+ + G+ L+++ S V+ +PYL+ G Y G + +++
Sbjct: 355 YDFMKQSRGMLLLYSLKNPSFPEYMFSS-NSGVMCLDIHVDHPYLVAVGHYDGNVAIYNL 413
Query: 149 RVQKKTPVHRTPLSVMAHTHPVFCMSVIGTQNAHNL--ISISNDGRLCSWSLEMLSSPQ- 205
+ P + H+ PV+ + NL S+S+DGR+ SW+L
Sbjct: 414 KKPHSQPSFCSSAKSGKHSDPVWQVKWQKDDMDQNLNFFSVSSDGRIVSWTLVKRKLVHI 473
Query: 206 ETRDLQYNNKQTKNLAVLSL-------AFP-QNDVNN-FVVGCEDGNVYSACRHGNKAGN 256
+ L+ T+ L L AF +++ F+VG E+G +Y C +
Sbjct: 474 DVIKLKVEGSTTEVPEGLQLHPVGCGTAFDFHKEIDYMFLVGTEEGKIYK-CSKSYSSQF 532
Query: 257 VECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVM 316
++ Y+ H V +S + H + ++++ S DW+VK+W+ P+ + + V
Sbjct: 533 LDTYDAHNMSVDTVSWNPY--H---TKVFMSCSSDWTVKIWDHTIKTPMFIY-DLNSAVG 586
Query: 317 DVQWSPINPALFATVEVAGRVDLWNLNLDT-EVPATSAIVEGAPALSRVTWTPNGTQLCV 375
DV W+P + +FA V G+ +++L ++ E + L+ V + + V
Sbjct: 587 DVAWAPYSSTVFAAVTTDGKAHIFDLAINKYEAICNQPVAAKKNRLTHVQFNLIHPIIIV 646
Query: 376 GDEKGAI 382
GD++G I
Sbjct: 647 GDDRGHI 653
>UNIPROTKB|F1NB77 [details] [associations]
symbol:Gga.16647 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003351 "epithelial cilium movement"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00690000102094 OMA:AINKYEA GO:GO:0003351
EMBL:AADN02068954 EMBL:AADN02068955 EMBL:AADN02068956
EMBL:AADN02068957 EMBL:AADN02068958 EMBL:AADN02068959
EMBL:AADN02068960 EMBL:AADN02068961 EMBL:AADN02068962
EMBL:AADN02068963 EMBL:AADN02068964 EMBL:AADN02068965
EMBL:AADN02068966 EMBL:AADN02068967 EMBL:AADN02068968
EMBL:AADN02068969 EMBL:AADN02068970 IPI:IPI00593534
Ensembl:ENSGALT00000009363 Uniprot:F1NB77
Length = 587
Score = 195 (73.7 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 71/326 (21%), Positives = 143/326 (43%)
Query: 33 LPQDLQ-FDMTGDE---KSSTKLSFCRQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRN 88
+ QD + F+ DE T L + +D+ +K VT + W+ ++ +L Y +
Sbjct: 273 IAQDFKYFEDASDEYRDHRGTLLPLWKFQYDK--TKRLAVTAISWNPKYKDLFAVGYG-S 329
Query: 89 KEAPNEPDGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDT 148
+ + G+ +++ +S ++ +P+L+ G Y G + +++
Sbjct: 330 YDFMKQSQGMLVLYTMKNPTFPEYVFSS-ESGIMCLDIHNDHPHLMAVGFYDGNVAIYNF 388
Query: 149 RVQKKTPVHRTPLSVMAHTHPVFCMS--VIGTQNAHNLISISNDGRLCSWSL-------- 198
+ P +++ HT PV+ + N N S+S+DGR+ SW+L
Sbjct: 389 KKATSQPSYKSSAKSGKHTDPVWQVKWQKDDMDNNLNFFSVSSDGRIVSWTLVKNELVHT 448
Query: 199 EMLSSPQETRDLQY-NNKQTKNLAV-LSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGN 256
+++ E +Q Q + + S F + F+VG E+G +Y C +
Sbjct: 449 DVIKLSAEGTTMQGPEGLQLQTVGCGTSFDFHKKIDYLFLVGTEEGKIYK-CSKCYSSQF 507
Query: 257 VECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVM 316
++ +E H V +S + H+ ++++ S DW+VK+W+ P+ + + V
Sbjct: 508 LDVFEAHHMAVDSVSWNPY--HLK---IFISCSSDWTVKIWDHTIKTPMFIY-DLNAAVG 561
Query: 317 DVQWSPINPALFATVEVAGRVDLWNL 342
DV WSP + +FA V G+ +++L
Sbjct: 562 DVAWSPYSSTVFAAVTTDGKAHVFDL 587
>FB|FBgn0034566 [details] [associations]
symbol:CG9313 species:7227 "Drosophila melanogaster"
[GO:0005868 "cytoplasmic dynein complex" evidence=ISS] [GO:0003774
"motor activity" evidence=ISS] [GO:0005875 "microtubule associated
complex" evidence=ISS] [GO:0030286 "dynein complex" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0007018
"microtubule-based movement" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
SMART:SM00320 EMBL:AE013599 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0007605 GO:GO:0007018 GO:GO:0030286 GO:GO:0042623
eggNOG:NOG145991 GeneTree:ENSGT00690000102094 KO:K10409 OMA:AINKYEA
EMBL:AY118746 RefSeq:NP_611530.5 UniGene:Dm.12386 SMR:Q8MSJ9
IntAct:Q8MSJ9 MINT:MINT-750962 STRING:Q8MSJ9
EnsemblMetazoa:FBtr0071521 GeneID:37374 KEGG:dme:Dmel_CG9313
UCSC:CG9313-RA FlyBase:FBgn0034566 InParanoid:Q8MSJ9
OrthoDB:EOG47M0CZ GenomeRNAi:37374 NextBio:803325 Uniprot:Q8MSJ9
Length = 739
Score = 189 (71.6 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 79/337 (23%), Positives = 142/337 (42%)
Query: 63 SKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDG-VCLIWNXXXXXXXXXXXXXCQSPV 121
+K NVT + ++ + +L + + +G +CL C V
Sbjct: 356 TKKMNVTDILFNPSYYDLFAVCFGSHDFMKQTNEGYLCLFTVKNPSFPDYIIQTDCG--V 413
Query: 122 LSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIGTQNA 181
+ C P+L + G Y G + +++ R K P++ + H V+ + G A
Sbjct: 414 MCCDIHPTYPFLAVIGLYDGNVAVYNLREDCKEPLYVSRGVNCKHGECVWQIKW-GLDMA 472
Query: 182 H---NLISISNDGRLCSWSL--------EMLSSPQETR--DLQYNNKQTKNLAVLSLAFP 228
N S+S+DGR+ +W L +++ +E D K T + F
Sbjct: 473 DGEVNFFSVSSDGRVFNWILMQNKLWVTTIITLYRENGLVDGPDGTKVTLKSGGSCMVFH 532
Query: 229 QNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTS 288
D F+VG E G +Y C + + Y H V + +R S+++++
Sbjct: 533 PVDNKIFLVGTECGYIYK-CSTAFSSKYLMTYYAHNMSVYRIDFNRFN-----SNIFVSC 586
Query: 289 SYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDT-E 347
DW VK+W P+ F + V DV+W+P + +FA V G+V +++LN++ +
Sbjct: 587 GADWMVKVWEDMRPDPLFIF-DLGAAVGDVKWAPYSSTVFAAVTTEGKVHVFDLNVNKYK 645
Query: 348 VPATSAIV-EGAPALSRVTWTPNGTQLCVGDEKGAIT 383
A+V + L+R+++ + VGDEKG T
Sbjct: 646 AICIQAVVPKRKNKLTRLSFNEKLAFIVVGDEKGVTT 682
>UNIPROTKB|Q96EX3 [details] [associations]
symbol:WDR34 "WD repeat-containing protein 34" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
EMBL:AL356481 EMBL:BC001614 EMBL:BC011874 IPI:IPI00306130
RefSeq:NP_443076.2 UniGene:Hs.495240 ProteinModelPortal:Q96EX3
SMR:Q96EX3 IntAct:Q96EX3 STRING:Q96EX3 PhosphoSite:Q96EX3
DMDM:88985038 PRIDE:Q96EX3 DNASU:89891 Ensembl:ENST00000372715
GeneID:89891 KEGG:hsa:89891 UCSC:uc004bvq.1 CTD:89891
GeneCards:GC09M131395 HGNC:HGNC:28296 HPA:HPA040764 HPA:HPA041091
MIM:613363 neXtProt:NX_Q96EX3 PharmGKB:PA134951680 eggNOG:NOG319112
HOGENOM:HOG000232095 HOVERGEN:HBG058945 InParanoid:Q96EX3
OMA:PVYCLEF OrthoDB:EOG43TZVB GenomeRNAi:89891 NextBio:76421
ArrayExpress:Q96EX3 Bgee:Q96EX3 CleanEx:HS_WDR34
Genevestigator:Q96EX3 GermOnline:ENSG00000119333 Uniprot:Q96EX3
Length = 536
Score = 181 (68.8 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 71/302 (23%), Positives = 133/302 (44%)
Query: 119 SPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVI-- 176
S VL F P + GG YSG++++WD + + RT L+ HT PV + +
Sbjct: 218 SAVLCLAFHPTQPSHVAGGLYSGEVLVWDLSRLEDPLLWRTGLTDDTHTDPVSQVVWLPE 277
Query: 177 -GTQNAHNLISISNDGRLCSW--------------SLEMLSSPQETRDLQYNNKQTKNLA 221
G + ++S++ DG++ W +L M P+ T+ ++ +T+ +
Sbjct: 278 PGHSHRFQVLSVATDGKVLLWQGIGVGQLQLTEGFALVMQQLPRSTKLKKHPRGETE-VG 336
Query: 222 VLSLAFPQNDVNNFVVGCEDG-NVYSACRHGNKA-----GNVEC-------YEGHEGPVV 268
++AF D F++G E G + + G A +V + H GP+
Sbjct: 337 ATAVAFSSFDPRLFILGTEGGFPLKCSLAAGEAALTRMPSSVPLRAPAQFTFSPHGGPIY 396
Query: 269 GLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALF 328
+S + H +L+L++ D V L+++ + P+ S Y+ V+WSP+ P +F
Sbjct: 397 SVSC--SPFH---RNLFLSAGTDGHVHLYSMLQAPPLTSLQLSLKYLFAVRWSPVRPLVF 451
Query: 329 ATVEVAGRVDLWNLNLDTEVPAT--SAIVEGAPALSRVTWTPNGTQL-CVGDEKGAITMF 385
A G V L++L ++ P + +P + + TQL GD +G + ++
Sbjct: 452 AAASGKGDVQLFDLQKSSQKPTVLIKQTQDESPVYC-LEFNSQQTQLLAAGDAQGTVKVW 510
Query: 386 DV 387
+
Sbjct: 511 QL 512
>FB|FBgn0029993 [details] [associations]
symbol:CG1571 species:7227 "Drosophila melanogaster"
[GO:0003774 "motor activity" evidence=ISS] [GO:0005868 "cytoplasmic
dynein complex" evidence=ISS] [GO:0005875 "microtubule associated
complex" evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0030286 "dynein complex" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0007018 GO:GO:0030286 GO:GO:0042623
EMBL:AY118275 ProteinModelPortal:Q8MTB1 SMR:Q8MTB1 PRIDE:Q8MTB1
FlyBase:FBgn0029993 eggNOG:NOG298469 InParanoid:Q8MTB1
OrthoDB:EOG4H44JQ ArrayExpress:Q8MTB1 Bgee:Q8MTB1 Uniprot:Q8MTB1
Length = 651
Score = 177 (67.4 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 81/337 (24%), Positives = 136/337 (40%)
Query: 55 RQFFDEKWSKNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVC---LIWNXXXXXXXX 111
RQ +W N + +M T H A R + +EP G +W+
Sbjct: 165 RQLRSIEWMPNNSRQFMTQYTNH----FAKGERLRPVTDEPFGGTNGFYVWDVKNPLKPR 220
Query: 112 XXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVF 171
Q L+ K ++ GGT GQ+ LW T + P+ PL V +H
Sbjct: 221 ITYDSKQQVSLAKICPKDENNMV-GGTGLGQVCLWGT-FKGGLPIRNCPLEV-SHRETTS 277
Query: 172 CMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYN--NKQTK--NLAVLSLAF 227
+ + +++ S S DG + W L P + L+ +Q++ + V L F
Sbjct: 278 ALCWVHSKSNTEFYSGSLDGSIKYWDTRDLKMPMQELLLEPEPQERQSRMDSHGVTVLEF 337
Query: 228 PQNDVNNFVVGCEDGNVYSACRHGNKAGN--VECYEGHEGPVVGLSSHRAQGHIDFSHLY 285
F++G + G+V+ R G + Y+ GPV ++ + F +
Sbjct: 338 EYTIPVRFIIGSDMGHVFVGNRKGMTPMETLLAHYQLFVGPVRSINRNPF-----FVKNF 392
Query: 286 LTSSYDWSVKLWNIKENKPVHSFNEFRD--YVMDVQWSPINPALFATVEVAGRVDLWNLN 343
L + DW ++W+ +E K S FR ++ WS +LF T ++ G VD W+L
Sbjct: 393 LVTG-DWRARIWS-EEVKDSPSTMYFRKNAQILCGAWSTGRCSLFVTGDINGVVDFWDLL 450
Query: 344 LDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKG 380
L P S V+ A++ + + P G L +G + G
Sbjct: 451 LHHRKPIRS--VDFKVAIADLVFRPEGDLLAIGLKNG 485
>FB|FBgn0036195 [details] [associations]
symbol:CG6053 species:7227 "Drosophila melanogaster"
[GO:0005868 "cytoplasmic dynein complex" evidence=ISS] [GO:0003774
"motor activity" evidence=ISS] [GO:0005875 "microtubule associated
complex" evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0042623 "ATPase activity, coupled" evidence=ISS]
[GO:0007605 "sensory perception of sound" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007605 GO:GO:0007018
GO:GO:0042623 GeneTree:ENSGT00690000101848 KO:K11143 OMA:HPDGNRK
RefSeq:NP_648497.2 UniGene:Dm.27849 ProteinModelPortal:Q9VTM3
SMR:Q9VTM3 EnsemblMetazoa:FBtr0301326 GeneID:39318
KEGG:dme:Dmel_CG6053 UCSC:CG6053-RA FlyBase:FBgn0036195
InParanoid:Q9VTM3 OrthoDB:EOG44J103 PhylomeDB:Q9VTM3
GenomeRNAi:39318 NextBio:813031 ArrayExpress:Q9VTM3 Bgee:Q9VTM3
Uniprot:Q9VTM3
Length = 576
Score = 170 (64.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 66/281 (23%), Positives = 118/281 (41%)
Query: 120 PVLSCCFAKFN---PYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVI 176
P + C ++N P ++ G Y+GQ+ WDTR K PV + V H PV +
Sbjct: 211 PKVPCVCLEYNQKDPTSLVSGMYNGQVAAWDTR-HGKLPVMISEREV-CHRDPVNSVLWN 268
Query: 177 GTQNAHNLISISNDGRLCSWSLEMLSSPQET--RDLQYNNKQ--TKNLAVLSLAFPQNDV 232
+++ S +DG++ W L+ P + D ++ Q +++ + L +
Sbjct: 269 NSKSGTEFFSGGSDGQVLWWDTRKLTEPLDRLLMDPVKSDDQDLSRSYGISVLEYETTIP 328
Query: 233 NNFVVGCEDGNVYSACRHGNK-AGNVEC-YEGHEGPVVGLSSHRAQGHIDFSHLYLTSSY 290
F+ G E G ++S R G ++ H GPV ++ + A F +LT
Sbjct: 329 TRFMAGTEMGMLFSCNRKGKTPTEKIQIRMMCHLGPVYAITRNPA-----FVKNFLTVG- 382
Query: 291 DWSVKLWN--IKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEV 348
DW ++W+ +E+ + + + + D WS + F + G +D W+L
Sbjct: 383 DWCARIWSEDCRESSIIWTKSS-SSMLTDGAWSYTKVSQFFITRMDGVLDTWDLLQQQNE 441
Query: 349 PATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
P + V P L V NG + G + GA + +V +
Sbjct: 442 PVLTVKVCDEP-LYCVRTNENGKFVSCGSQLGATFLVEVSD 481
>UNIPROTKB|F1NVZ6 [details] [associations]
symbol:Gga.9664 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 OMA:VQCNEDN
GeneTree:ENSGT00390000013743 EMBL:AADN02000374 IPI:IPI00573684
Ensembl:ENSGALT00000010589 ArrayExpress:F1NVZ6 Uniprot:F1NVZ6
Length = 1074
Score = 118 (46.6 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 43/182 (23%), Positives = 83/182 (45%)
Query: 222 VLSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDF 281
+L++ F +D N+F+VG G + RH K + + E +G+ S IDF
Sbjct: 872 MLTVKFLPSDPNHFIVGTNVGLIGHGTRHDLKV-LPKLFRPQE---IGMRSISINA-IDF 926
Query: 282 ----SHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDY--VMDVQWSPINPALFATVEVAG 335
L+L D S++L + P+ +N+ + V+ +QW+ PA+F ++ +
Sbjct: 927 FPFGKSLFLVGCSDGSIRLHQMTSEYPLMQWNDSTNGQPVIALQWALTRPAVFFVLDASS 986
Query: 336 RVDLWNLNLDTEV-PATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGEVGIAC 394
+ +W+L L+ ++ P + P+ + +T G G + + GE+ I C
Sbjct: 987 NIYIWDL-LENDLFPVAKQTI---PSENVITMALLGEPEKTNGLLGIVLANNSGEIDIHC 1042
Query: 395 LK 396
+K
Sbjct: 1043 VK 1044
Score = 92 (37.4 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 23/67 (34%), Positives = 30/67 (44%)
Query: 117 CQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVI 176
C S VL CCF+ L+ GT G +++WD R + H T S T V S
Sbjct: 705 CDSEVLCCCFSPRKTTLVFAGTVDGSLLVWDLREDARMHPHVT-FSETDWTFRVPTFSTD 763
Query: 177 GTQNAHN 183
G N+ N
Sbjct: 764 GILNSVN 770
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 152 (58.6 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 62/239 (25%), Positives = 109/239 (45%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHRT-P-LSVMAHTHPVFCMSVIGTQNAHNLI 185
N +I T S ++++D T+ K P P L + H + +S N + L+
Sbjct: 140 NACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGY-LL 198
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + ++P+E R + N T + AV+ +A+ + F +D +
Sbjct: 199 SASDDHTICLWDIN--ATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKL 256
Query: 245 YS-ACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
R+ N + + H V LS + + +F + T S D +V LW+++ K
Sbjct: 257 MIWDTRNNNTSKPSHTVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNLK 311
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+HSF +D + VQWSP N + A+ R+ +W+L+ E +T +G P L
Sbjct: 312 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 370
>MGI|MGI:2445085 [details] [associations]
symbol:Wdr60 "WD repeat domain 60" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005929
"cilium" evidence=IDA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2445085 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005929 CTD:55112 eggNOG:NOG325464 HOGENOM:HOG000154850
HOVERGEN:HBG094160 OMA:VQCNEDN OrthoDB:EOG4B8JCW EMBL:AK052482
EMBL:AK144138 IPI:IPI00226499 RefSeq:NP_666151.3 UniGene:Mm.31382
ProteinModelPortal:Q8C761 SMR:Q8C761 PhosphoSite:Q8C761
PaxDb:Q8C761 PRIDE:Q8C761 Ensembl:ENSMUST00000039349 GeneID:217935
KEGG:mmu:217935 UCSC:uc007phj.1 GeneTree:ENSGT00390000013743
InParanoid:Q8C761 NextBio:376106 Bgee:Q8C761 CleanEx:MM_WDR60
Genevestigator:Q8C761 GermOnline:ENSMUSG00000042050 Uniprot:Q8C761
Length = 999
Score = 108 (43.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 37/127 (29%), Positives = 61/127 (48%)
Query: 223 LSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAG-NVECYEGHEGPVVGLSSHRAQGHIDF 281
LS+ F +D N+FVVG + G + + R + V E H G+ + IDF
Sbjct: 807 LSVKFLPSDPNHFVVGTDMGLISHSTRQDWRVSPRVFKPEQH-----GVRPIKVNV-IDF 860
Query: 282 SH----LYLTSSYDWSVKLWNIKENKPVHSF-NEFRDY-VMDVQWSPINPALFATVEVAG 335
S ++L D S++L + +P+ + N + V +QWSP PA+F + A
Sbjct: 861 SPFEETVFLAGCSDGSIRLHQLTSERPIMQWDNSTSGHAVTSLQWSPTRPAVFLVQDDAS 920
Query: 336 RVDLWNL 342
R+ +W+L
Sbjct: 921 RIYVWDL 927
Score = 95 (38.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 23/68 (33%), Positives = 30/68 (44%)
Query: 117 CQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLS--VMAHTHPVFCMS 174
C+S V CCF+ +L+ GT G +V+WD R + H LS A P F
Sbjct: 638 CESKVTCCCFSPLKAFLLFAGTVHGSVVVWDLREDSRIH-HYVRLSNCFWAFRTPTFSTD 696
Query: 175 VIGTQNAH 182
I T H
Sbjct: 697 GILTSVNH 704
>RGD|1306493 [details] [associations]
symbol:Wdr60 "WD repeat domain 60" species:10116 "Rattus
norvegicus" [GO:0005929 "cilium" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
SMART:SM00320 RGD:1306493 Gene3D:2.130.10.10 SUPFAM:SSF50978
OrthoDB:EOG4B8JCW GeneTree:ENSGT00390000013743 IPI:IPI00368856
Ensembl:ENSRNOT00000006144 UCSC:RGD:1306493 Uniprot:D3ZYV1
Length = 1000
Score = 107 (42.7 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 33/126 (26%), Positives = 62/126 (49%)
Query: 223 LSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFS 282
LS+ F +D N+FVVG + G + + R + + + ++ + V + + IDFS
Sbjct: 808 LSVKFLPSDPNHFVVGTDMGLISHSTRQDWRV-SPKVFKPQQHGVRPIKVNV----IDFS 862
Query: 283 H----LYLTSSYDWSVKLWNIKENKPVHSFNEFRD--YVMDVQWSPINPALFATVEVAGR 336
++L D S++L + +P+ ++ V +QWSP PA+F + A R
Sbjct: 863 PFEETVFLAGCSDGSIRLHQLTSERPIMQWDNSTSGRSVTSLQWSPTRPAVFLVQDDASR 922
Query: 337 VDLWNL 342
+ +W+L
Sbjct: 923 IYVWDL 928
Score = 95 (38.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 23/68 (33%), Positives = 30/68 (44%)
Query: 117 CQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLS--VMAHTHPVFCMS 174
C+S V CCF+ +L+ GT G +V+WD R + H LS A P F
Sbjct: 639 CESKVTCCCFSPLKAFLLFAGTVHGSVVVWDLREDSRIH-HYVRLSSCFWAFRTPTFSTD 697
Query: 175 VIGTQNAH 182
I T H
Sbjct: 698 GILTSVNH 705
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 143 (55.4 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 59/239 (24%), Positives = 104/239 (43%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR-TP-LSVMAHTHPVFCMSVIGTQNAHNLI 185
NPY+I T S ++++D T+ K P P L + H + +S H L+
Sbjct: 134 NPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNSNLKGH-LL 192
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + + P+E + + T + AV+ +A+ + F +D +
Sbjct: 193 SASDDHTVCLWDIS--AGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 250
Query: 245 YSACRHGNKAGNVE-CYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
N + H V LS + + +F + T S D +V LW+++ K
Sbjct: 251 MIWDTRSNTTSKPSHSVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNLK 305
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+HSF +D + V WSP N + A+ R+++W+L+ E + +G P L
Sbjct: 306 LKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 364
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 142 (55.0 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 59/239 (24%), Positives = 107/239 (44%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR-TP-LSVMAHTHPVFCMSVIGTQNAHNLI 185
NP +I T S ++++D T+ K P P L + H + +S + H L+
Sbjct: 101 NPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGH-LL 159
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + + P+E + + T + AV+ +++ + F +D +
Sbjct: 160 SASDDHTICLWDISAV--PKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 217
Query: 245 YS-ACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
R N + + H V LS + + +F + T S D +V LW+++ K
Sbjct: 218 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNLK 272
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+HSF +D + VQWSP N + A+ R+++W+L+ E + +G P L
Sbjct: 273 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 331
>MGI|MGI:1919070 [details] [associations]
symbol:Wdr34 "WD repeat domain 34" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919070 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 EMBL:BX005298 CTD:89891
eggNOG:NOG319112 HOVERGEN:HBG058945 OrthoDB:EOG43TZVB EMBL:BC085113
IPI:IPI00349055 RefSeq:NP_001008498.2 UniGene:Mm.88053
ProteinModelPortal:Q5U4F6 SMR:Q5U4F6 STRING:Q5U4F6
PhosphoSite:Q5U4F6 PaxDb:Q5U4F6 PRIDE:Q5U4F6 GeneID:71820
KEGG:mmu:71820 InParanoid:Q5U4F6 NextBio:334600 Bgee:Q5U4F6
CleanEx:MM_WDR34 Genevestigator:Q5U4F6
GermOnline:ENSMUSG00000039715 Uniprot:Q5U4F6
Length = 535
Score = 144 (55.7 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 68/267 (25%), Positives = 118/267 (44%)
Query: 144 VLWDTRVQKKT---PVHRTP-LSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLC---SW 196
+LW T + T PV++ L H+H +S T L S G+L +
Sbjct: 253 LLWRTGLTDDTHTDPVYQVLWLPEPRHSHRFQVLSA-ATDGKVLLWRGSGAGQLRLTKGF 311
Query: 197 SLEMLSSPQETRDLQYNNKQTKNLAVLSLAFPQNDVNNFVVGCEDG---------NVYSA 247
+L + P+ T+ L+ + + V S+AF D + FV+G E G V +
Sbjct: 312 ALAVQQLPRSTK-LKKPPRGETEVGVTSVAFSSFDSSLFVLGTEGGFPLKCSLASEVAAL 370
Query: 248 CRHGNKA---GNVE-CYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
R + V+ + H GPV +S + H +L+L++ D V L+++ + +
Sbjct: 371 TRMPSSVPLRAPVQFTFSPHGGPVYSVSC--SPFH---RNLFLSAGTDGHVHLYSMLQAQ 425
Query: 304 PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIV--EGAPAL 361
P+ S Y+ V+WSP+ P +FA G V L++L ++ P S +G+P
Sbjct: 426 PLTSLQLSHKYLFAVRWSPVRPLVFAAASGEGDVQLFDLQKSSQKPTVSITQTQDGSPVY 485
Query: 362 SRVTWTPNGTQL-CVGDEKGAITMFDV 387
+ + TQL GD KG + ++ +
Sbjct: 486 C-LEFNSQQTQLLAAGDAKGMVKVWQL 511
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 142 (55.0 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 59/239 (24%), Positives = 107/239 (44%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR-TP-LSVMAHTHPVFCMSVIGTQNAHNLI 185
NP +I T S ++++D T+ K P P L + H + +S + H L+
Sbjct: 136 NPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGH-LL 194
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + + P+E + + T + AV+ +++ + F +D +
Sbjct: 195 SASDDHTICLWDISAV--PKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 245 YS-ACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
R N + + H V LS + + +F + T S D +V LW+++ K
Sbjct: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNLK 307
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+HSF +D + VQWSP N + A+ R+++W+L+ E + +G P L
Sbjct: 308 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 142 (55.0 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 59/239 (24%), Positives = 107/239 (44%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR-TP-LSVMAHTHPVFCMSVIGTQNAHNLI 185
NP +I T S ++++D T+ K P P L + H + +S + H L+
Sbjct: 136 NPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGH-LL 194
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + + P+E + + T + AV+ +++ + F +D +
Sbjct: 195 SASDDHTICLWDISAV--PKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 245 YS-ACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
R N + + H V LS + + +F + T S D +V LW+++ K
Sbjct: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNLK 307
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+HSF +D + VQWSP N + A+ R+++W+L+ E + +G P L
Sbjct: 308 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 142 (55.0 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 59/239 (24%), Positives = 107/239 (44%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR-TP-LSVMAHTHPVFCMSVIGTQNAHNLI 185
NP +I T S ++++D T+ K P P L + H + +S + H L+
Sbjct: 136 NPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGH-LL 194
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + + P+E + + T + AV+ +++ + F +D +
Sbjct: 195 SASDDHTICLWDISAV--PKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 245 YS-ACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
R N + + H V LS + + +F + T S D +V LW+++ K
Sbjct: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNLK 307
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+HSF +D + VQWSP N + A+ R+++W+L+ E + +G P L
Sbjct: 308 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 142 (55.0 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 59/239 (24%), Positives = 107/239 (44%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR-TP-LSVMAHTHPVFCMSVIGTQNAHNLI 185
NP +I T S ++++D T+ K P P L + H + +S + H L+
Sbjct: 136 NPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGH-LL 194
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + + P+E + + T + AV+ +++ + F +D +
Sbjct: 195 SASDDHTICLWDISAV--PKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 245 YS-ACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
R N + + H V LS + + +F + T S D +V LW+++ K
Sbjct: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNLK 307
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+HSF +D + VQWSP N + A+ R+++W+L+ E + +G P L
Sbjct: 308 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 142 (55.0 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 59/239 (24%), Positives = 107/239 (44%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR-TP-LSVMAHTHPVFCMSVIGTQNAHNLI 185
NP +I T S ++++D T+ K P P L + H + +S + H L+
Sbjct: 136 NPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGH-LL 194
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + + P+E + + T + AV+ +++ + F +D +
Sbjct: 195 SASDDHTICLWDISAV--PKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 245 YS-ACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
R N + + H V LS + + +F + T S D +V LW+++ K
Sbjct: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNLK 307
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+HSF +D + VQWSP N + A+ R+++W+L+ E + +G P L
Sbjct: 308 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 142 (55.0 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 59/239 (24%), Positives = 107/239 (44%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR-TP-LSVMAHTHPVFCMSVIGTQNAHNLI 185
NP +I T S ++++D T+ K P P L + H + +S + H L+
Sbjct: 136 NPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGH-LL 194
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + + P+E + + T + AV+ +++ + F +D +
Sbjct: 195 SASDDHTICLWDISAV--PKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 245 YS-ACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
R N + + H V LS + + +F + T S D +V LW+++ K
Sbjct: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNLK 307
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+HSF +D + VQWSP N + A+ R+++W+L+ E + +G P L
Sbjct: 308 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 142 (55.0 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 59/239 (24%), Positives = 107/239 (44%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR-TP-LSVMAHTHPVFCMSVIGTQNAHNLI 185
NP +I T S ++++D T+ K P P L + H + +S + H L+
Sbjct: 136 NPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGH-LL 194
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + + P+E + + T + AV+ +++ + F +D +
Sbjct: 195 SASDDHTICLWDISAV--PKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 245 YS-ACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
R N + + H V LS + + +F + T S D +V LW+++ K
Sbjct: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNLK 307
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+HSF +D + VQWSP N + A+ R+++W+L+ E + +G P L
Sbjct: 308 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 142 (55.0 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 59/239 (24%), Positives = 107/239 (44%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR-TP-LSVMAHTHPVFCMSVIGTQNAHNLI 185
NP +I T S ++++D T+ K P P L + H + +S + H L+
Sbjct: 136 NPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGH-LL 194
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + + P+E + + T + AV+ +++ + F +D +
Sbjct: 195 SASDDHTICLWDISAV--PKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 245 YS-ACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
R N + + H V LS + + +F + T S D +V LW+++ K
Sbjct: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNLK 307
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+HSF +D + VQWSP N + A+ R+++W+L+ E + +G P L
Sbjct: 308 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 59/239 (24%), Positives = 107/239 (44%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR-TP-LSVMAHTHPVFCMSVIGTQNAHNLI 185
NP +I T S ++++D T+ K P P L + H + +S + NL+
Sbjct: 136 NPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSW-NPNLSGNLL 194
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + + P+E + + T + AV+ +++ + F +D +
Sbjct: 195 SASDDHTICLWDISAV--PKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 245 YS-ACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
R N + + H V LS + + +F + T S D +V LW+++ K
Sbjct: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNLK 307
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+HSF +D + VQWSP N + A+ R+++W+L+ E + +G P L
Sbjct: 308 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 139 (54.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 63/241 (26%), Positives = 100/241 (41%)
Query: 130 NPYLILGGTYSGQIVLWDTRVQKKTPVHRTP-------LSVMAHTHPVFCMSVIGTQNAH 182
N +I T S ++ ++DT K P+ TP L + H + +S + H
Sbjct: 133 NHSIIATKTVSSEVYIFDTT---KHPLEPTPDGKCSPNLKLTGHKKEGYGISWNPRKEGH 189
Query: 183 NLISISNDGRLCSWSLEMLSSPQETRD-LQYNNKQTKNLAVLSLAFPQNDVNNFVVGCED 241
L+S S+D +C W + S T D L N T + ++ + +D VG +
Sbjct: 190 -LLSCSDDQSICMWDISAASKSDSTLDALNIYNGHTSIVEDVAWHYI-HDTFFGSVGDDK 247
Query: 242 GNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKE 301
+ R G K + E H V LS + +F L T S D +V LW+++
Sbjct: 248 KLMIWDTRTGTKP--IHVVEAHNSEVNCLSFNP---FCEF--LVATGSTDKTVALWDMRN 300
Query: 302 -NKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPA 360
+HS D V VQ+SP N + A+ RV++W+L+ E +G P
Sbjct: 301 LGNRLHSLISHTDEVFQVQFSPHNETVLASCGSDRRVNVWDLSRIGEEQNNEDAADGPPE 360
Query: 361 L 361
L
Sbjct: 361 L 361
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 138 (53.6 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 58/239 (24%), Positives = 107/239 (44%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR-TP-LSVMAHTHPVFCMSVIGTQNAHNLI 185
NP +I T + ++++D T+ K P P L + H + +S + NL+
Sbjct: 136 NPCIIATKTPTSDVLVFDYTKHPSKPDPSGECNPNLRLRGHQKEGYGLSW-NPNLSGNLL 194
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + + P+E + + T + AV+ +++ + F +D +
Sbjct: 195 SASDDHTICLWDISAV--PKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 245 YS-ACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
R N + + H V LS + + +F + T S D +V LW+++ K
Sbjct: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNLK 307
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+HSF +D + VQWSP N + A+ R+++W+L+ E + +G P L
Sbjct: 308 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 138 (53.6 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 59/239 (24%), Positives = 107/239 (44%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR-TP-LSVMAHTHPVFCMSVIGTQNAHNLI 185
NP +I T S ++++D T+ K P P L + H + +S + NL+
Sbjct: 136 NPCIIATKTPSCDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSW-NPNLSGNLL 194
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + + P+E + + T + AV+ +++ + F +D +
Sbjct: 195 SASDDHTICLWDISAV--PKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 245 YS-ACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
R N + + H V LS + + +F + T S D +V LW+++ K
Sbjct: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNLK 307
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+HSF +D + VQWSP N + A+ R+++W+L+ E + +G P L
Sbjct: 308 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
>FB|FBgn0036973 [details] [associations]
symbol:Rbbp5 species:7227 "Drosophila melanogaster"
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0044666
"MLL3/4 complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0048188 GO:GO:0051568
HSSP:P16649 GO:GO:0044666 KO:K14961 OMA:YPEEFDG
GeneTree:ENSGT00530000064100 EMBL:AY071120 EMBL:BT032759
RefSeq:NP_649209.1 UniGene:Dm.6107 SMR:Q9VPH8 MINT:MINT-833391
STRING:Q9VPH8 EnsemblMetazoa:FBtr0078242 GeneID:40239
KEGG:dme:Dmel_CG5585 UCSC:CG5585-RA FlyBase:FBgn0036973
InParanoid:Q9VPH8 OrthoDB:EOG4V9S5V GenomeRNAi:40239 NextBio:817732
Uniprot:Q9VPH8
Length = 489
Score = 121 (47.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 39/122 (31%), Positives = 61/122 (50%)
Query: 117 CQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVI 176
C S ++C F K+ L +G G+IV+WD + + + AH HPV C S+
Sbjct: 23 CISLAVTCAFNKYGTLLAVGCN-DGRIVIWDFLTRGIAKI------ISAHVHPV-C-SLS 73
Query: 177 GTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLSLAF-PQNDVNNF 235
T+N H L+S S D +C W ++L T +L++ + VL + F P+ND N
Sbjct: 74 WTRNGHKLLSASTDNNVCIW--DVL-----TGELEHKYRFPS--PVLKVQFDPRND-NRL 123
Query: 236 VV 237
+V
Sbjct: 124 LV 125
Score = 61 (26.5 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 22/96 (22%), Positives = 42/96 (43%)
Query: 290 YDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVP 349
Y W + N+ K +H + ++DV W P+ P + A++ +G V +W N +V
Sbjct: 276 YIWEKSIGNLV--KILHGTKG--ELLLDVVWHPVRP-IIASIS-SGLVSIWAQN---QVE 326
Query: 350 ATSAIVEGAPALSR-VTWTPNGTQLCVGDEKGAITM 384
SA L V + ++ + DE ++ +
Sbjct: 327 NWSAFAPDFKELDENVEYEERESEFDIADEDKSVDL 362
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 137 (53.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 58/239 (24%), Positives = 105/239 (43%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR-TP-LSVMAHTHPVFCMSVIGTQNAHNLI 185
NP +I T S ++++D T+ K P +P L + H + +S + H L+
Sbjct: 135 NPCIIATKTPSADVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEGYGLSWNSNLSGH-LL 193
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + + P+E + + T + AV+ +A+ + F +D +
Sbjct: 194 SASDDHTVCLWDIS--AGPKEGKVVDAKAVFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
Query: 245 YSACRHGNKAGNVE-CYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
N + H V LS + + +F + T S D +V LW+++ K
Sbjct: 252 MIWDTRSNTTSKPSHSVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNLK 306
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+HSF +D + V WSP N + A+ R+++W+L+ E + +G P L
Sbjct: 307 LKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 365
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 137 (53.3 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 46/182 (25%), Positives = 84/182 (46%)
Query: 183 NLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCED 241
NL+S S+D +C W + +P+E + + T + AV+ +++ + F +D
Sbjct: 192 NLLSASDDHTICLWDIS--GAPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADD 249
Query: 242 GNVYS-ACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIK 300
+ R N + + H V LS + + +F + T S D +V LW+++
Sbjct: 250 QKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLR 304
Query: 301 ENK-PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAP 359
K +HSF +D + VQWSP N + A+ R+++W+L+ E + +G P
Sbjct: 305 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPP 364
Query: 360 AL 361
L
Sbjct: 365 EL 366
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 136 (52.9 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 59/240 (24%), Positives = 107/240 (44%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR-TP-LSVMAHTHPVFCMSVIGTQNAHN-L 184
NP +I T + ++++D T+ K P TP L + H + +S N L
Sbjct: 136 NPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEGYGLS--WNPNLSGCL 193
Query: 185 ISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGN 243
+S S+D +C W + + P+E + + T + AV+ +++ + F +D
Sbjct: 194 LSASDDHTICLWDISTV--PKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQK 251
Query: 244 VYS-ACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKEN 302
+ R N + + H V LS + + +F + T S D +V LW+++
Sbjct: 252 LMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNL 306
Query: 303 K-PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
K +HSF +D + VQWSP N + A+ R+++W+L+ E + +G P L
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 135 (52.6 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 57/239 (23%), Positives = 105/239 (43%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR-TP-LSVMAHTHPVFCMSVIGTQNAHNLI 185
NP++I T S ++++D T+ K P P L + H + +S + H L+
Sbjct: 126 NPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGH-LL 184
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + + P+E + + T + AV+ +A+ + F +D +
Sbjct: 185 SASDDHTVCLWDIN--AGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 242
Query: 245 YSACRHGNKAGNVE-CYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
N + H V LS + + +F + T S D +V LW+++ K
Sbjct: 243 MIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNLK 297
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+H+F +D + V WSP N + A+ R+++W+L+ E + +G P L
Sbjct: 298 LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 356
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 135 (52.6 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 57/239 (23%), Positives = 105/239 (43%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR-TP-LSVMAHTHPVFCMSVIGTQNAHNLI 185
NP++I T S ++++D T+ K P P L + H + +S + H L+
Sbjct: 126 NPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGH-LL 184
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + + P+E + + T + AV+ +A+ + F +D +
Sbjct: 185 SASDDHTVCLWDIN--AGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 242
Query: 245 YSACRHGNKAGNVE-CYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
N + H V LS + + +F + T S D +V LW+++ K
Sbjct: 243 MIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNLK 297
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+H+F +D + V WSP N + A+ R+++W+L+ E + +G P L
Sbjct: 298 LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 356
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 135 (52.6 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 57/239 (23%), Positives = 105/239 (43%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR-TP-LSVMAHTHPVFCMSVIGTQNAHNLI 185
NP++I T S ++++D T+ K P P L + H + +S + H L+
Sbjct: 135 NPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGH-LL 193
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + + P+E + + T + AV+ +A+ + F +D +
Sbjct: 194 SASDDHTVCLWDIN--AGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
Query: 245 YSACRHGNKAGNVE-CYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
N + H V LS + + +F + T S D +V LW+++ K
Sbjct: 252 MIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNLK 306
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+H+F +D + V WSP N + A+ R+++W+L+ E + +G P L
Sbjct: 307 LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 365
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 135 (52.6 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 57/239 (23%), Positives = 105/239 (43%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR-TP-LSVMAHTHPVFCMSVIGTQNAHNLI 185
NP++I T S ++++D T+ K P P L + H + +S + H L+
Sbjct: 135 NPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGH-LL 193
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + + P+E + + T + AV+ +A+ + F +D +
Sbjct: 194 SASDDHTVCLWDIN--AGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
Query: 245 YSACRHGNKAGNVE-CYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
N + H V LS + + +F + T S D +V LW+++ K
Sbjct: 252 MIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNLK 306
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+H+F +D + V WSP N + A+ R+++W+L+ E + +G P L
Sbjct: 307 LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 365
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 135 (52.6 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 57/239 (23%), Positives = 105/239 (43%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR-TP-LSVMAHTHPVFCMSVIGTQNAHNLI 185
NP++I T S ++++D T+ K P P L + H + +S + H L+
Sbjct: 135 NPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGH-LL 193
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + + P+E + + T + AV+ +A+ + F +D +
Sbjct: 194 SASDDHTVCLWDIN--AGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
Query: 245 YSACRHGNKAGNVE-CYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
N + H V LS + + +F + T S D +V LW+++ K
Sbjct: 252 MIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNLK 306
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+H+F +D + V WSP N + A+ R+++W+L+ E + +G P L
Sbjct: 307 LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 365
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 135 (52.6 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 57/239 (23%), Positives = 105/239 (43%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR-TP-LSVMAHTHPVFCMSVIGTQNAHNLI 185
NP++I T S ++++D T+ K P P L + H + +S + H L+
Sbjct: 135 NPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGH-LL 193
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + + P+E + + T + AV+ +A+ + F +D +
Sbjct: 194 SASDDHTVCLWDIN--AGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
Query: 245 YSACRHGNKAGNVE-CYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
N + H V LS + + +F + T S D +V LW+++ K
Sbjct: 252 MIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNLK 306
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+H+F +D + V WSP N + A+ R+++W+L+ E + +G P L
Sbjct: 307 LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 365
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 135 (52.6 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 57/239 (23%), Positives = 105/239 (43%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR-TP-LSVMAHTHPVFCMSVIGTQNAHNLI 185
NP++I T S ++++D T+ K P P L + H + +S + H L+
Sbjct: 135 NPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGH-LL 193
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + + P+E + + T + AV+ +A+ + F +D +
Sbjct: 194 SASDDHTVCLWDIN--AGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
Query: 245 YSACRHGNKAGNVE-CYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
N + H V LS + + +F + T S D +V LW+++ K
Sbjct: 252 MIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNLK 306
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+H+F +D + V WSP N + A+ R+++W+L+ E + +G P L
Sbjct: 307 LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 365
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 135 (52.6 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 57/239 (23%), Positives = 105/239 (43%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR-TP-LSVMAHTHPVFCMSVIGTQNAHNLI 185
NP++I T S ++++D T+ K P P L + H + +S + H L+
Sbjct: 135 NPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGH-LL 193
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + + P+E + + T + AV+ +A+ + F +D +
Sbjct: 194 SASDDHTVCLWDIN--AGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
Query: 245 YSACRHGNKAGNVE-CYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
N + H V LS + + +F + T S D +V LW+++ K
Sbjct: 252 MIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNLK 306
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+H+F +D + V WSP N + A+ R+++W+L+ E + +G P L
Sbjct: 307 LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 365
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 135 (52.6 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 57/239 (23%), Positives = 105/239 (43%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR-TP-LSVMAHTHPVFCMSVIGTQNAHNLI 185
NP++I T S ++++D T+ K P P L + H + +S + H L+
Sbjct: 135 NPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGH-LL 193
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + + P+E + + T + AV+ +A+ + F +D +
Sbjct: 194 SASDDHTVCLWDIN--AGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
Query: 245 YSACRHGNKAGNVE-CYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
N + H V LS + + +F + T S D +V LW+++ K
Sbjct: 252 MIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNLK 306
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+H+F +D + V WSP N + A+ R+++W+L+ E + +G P L
Sbjct: 307 LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 365
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 135 (52.6 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 57/239 (23%), Positives = 105/239 (43%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR-TP-LSVMAHTHPVFCMSVIGTQNAHNLI 185
NP++I T S ++++D T+ K P P L + H + +S + H L+
Sbjct: 179 NPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGH-LL 237
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + + P+E + + T + AV+ +A+ + F +D +
Sbjct: 238 SASDDHTVCLWDIN--AGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 295
Query: 245 YSACRHGNKAGNVE-CYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
N + H V LS + + +F + T S D +V LW+++ K
Sbjct: 296 MIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNLK 350
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+H+F +D + V WSP N + A+ R+++W+L+ E + +G P L
Sbjct: 351 LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 409
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 135 (52.6 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 57/239 (23%), Positives = 105/239 (43%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR-TP-LSVMAHTHPVFCMSVIGTQNAHNLI 185
NP++I T S ++++D T+ K P P L + H + +S + H L+
Sbjct: 179 NPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGH-LL 237
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + + P+E + + T + AV+ +A+ + F +D +
Sbjct: 238 SASDDHTVCLWDIN--AGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 295
Query: 245 YSACRHGNKAGNVE-CYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
N + H V LS + + +F + T S D +V LW+++ K
Sbjct: 296 MIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNLK 350
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+H+F +D + V WSP N + A+ R+++W+L+ E + +G P L
Sbjct: 351 LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 409
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 134 (52.2 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 58/239 (24%), Positives = 105/239 (43%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR-TP-LSVMAHTHPVFCMSVIGTQNAHNLI 185
NP +I T S ++++D T+ K P +P L + H + +S + H L+
Sbjct: 135 NPCIIATKTPSADVLVFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNSNLSGH-LL 193
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + + P+E + + T + AV+ +A+ + F +D +
Sbjct: 194 SASDDHTVCLWDIS--AGPKEGKVVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
Query: 245 YSACRHGNKAGNVE-CYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
N + H V LS + + +F + T S D +V LW+++ K
Sbjct: 252 MIWDTRSNTTSKPSHSVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNLK 306
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+HSF +D + V WSP N + A+ R+++W+L+ E + +G P L
Sbjct: 307 LKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 365
>POMBASE|SPAC29A4.18 [details] [associations]
symbol:prw1 "Clr6 histone deacetylase complex subunit
Prw1" species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0006342 "chromatin silencing"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L complex"
evidence=IDA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC29A4.18 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0000070 GO:GO:0006342 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0016575 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0032221 HOGENOM:HOG000160330 PIR:T38471
RefSeq:NP_594864.1 ProteinModelPortal:O14021 DIP:DIP-29342N
IntAct:O14021 STRING:O14021 EnsemblFungi:SPAC29A4.18.1
GeneID:2541804 KEGG:spo:SPAC29A4.18 OMA:HISSHEK OrthoDB:EOG4MWCH4
NextBio:20802892 Uniprot:O14021
Length = 431
Score = 134 (52.2 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 56/252 (22%), Positives = 102/252 (40%)
Query: 123 SCCFAKFNPY----LILGGTYSGQIVLWDTR-VQKKTPVHRTPLS----VMAHTHPVFCM 173
S C AK P + G Y ++++D + + +PL + HT P C
Sbjct: 131 SVCSAKLMPQDDSCVATVGNYHNDVLVFDKESFESYSSASESPLKPKYRLTKHTQP--CT 188
Query: 174 SVIGT-QNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYN-NKQTKNLAVLSLAFPQND 231
SV + L+S S D L W L + L+ + + K ++ + + D
Sbjct: 189 SVCWNFLSKGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSHEKQVSDVRFHYKHQD 248
Query: 232 VNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYD 291
+ V + +V+ R H GP+ ++ + H DF + T S D
Sbjct: 249 LLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNP---HNDF--ILATCSTD 303
Query: 292 WSVKLWNIKE-NKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLN-LDTEVP 349
++ LW+++ N+ +H+ D V + +SP + A+ R +W+L+ + + P
Sbjct: 304 KTIALWDLRNLNQRLHTLEGHEDIVTKISFSPHEEPILASTSADRRTLVWDLSRIGEDQP 363
Query: 350 ATSAIVEGAPAL 361
A A +G P L
Sbjct: 364 AEEA-QDGPPEL 374
>UNIPROTKB|Q6GPU3 [details] [associations]
symbol:dtl-b "Denticleless protein homolog B" species:8355
"Xenopus laevis" [GO:0000209 "protein polyubiquitination"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006513 "protein
monoubiquitination" evidence=ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] [GO:0009411 "response to UV"
evidence=ISS] [GO:0019985 "translesion synthesis" evidence=ISS]
[GO:0031464 "Cul4A-RING ubiquitin ligase complex" evidence=ISS]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=ISS]
[GO:0031572 "G2 DNA damage checkpoint" evidence=ISS] [GO:0051726
"regulation of cell cycle" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0009411 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006511 GO:GO:0000209 GO:GO:0031572 GO:GO:0006513
GO:GO:0031464 GO:GO:0031465 GO:GO:0019985 HOVERGEN:HBG057737
KO:K11790 EMBL:BC073015 RefSeq:NP_001085609.1 UniGene:Xl.34158
ProteinModelPortal:Q6GPU3 GeneID:444035 KEGG:xla:444035 CTD:51514
Xenbase:XB-GENE-985629 Uniprot:Q6GPU3
Length = 711
Score = 112 (44.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 46/183 (25%), Positives = 70/183 (38%)
Query: 173 MSVIGTQNAHNLISISN-DGRLCSWSLEMLSS-----PQETRDLQYNNKQTKNLAVLSLA 226
++V+ Q+ + +IS DG + W L S P + Y T+ L SL
Sbjct: 220 VTVVIFQDEYTVISAGAVDGVVKIWDLRKNYSTYRQDPVPVKLFPYPGNSTRKLGYSSLV 279
Query: 227 FPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYL 286
N F C D NVY G K V + GH+ + +A D L L
Sbjct: 280 LDPTGTNLFA-SCTDDNVYMFNATGLKTDPVSVFRGHQNSTFYI---KASVSPDGQFL-L 334
Query: 287 TSSYDWSVKLWNIKEN--KPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNL 344
+ S D S +W + + P++ ++ V V W + AT V +W LN
Sbjct: 335 SGSSDHSAYIWQVSDPLAAPINLIGHCQE-VTSVAWCQSDFTKIATCSDDNTVRIWRLNR 393
Query: 345 DTE 347
+E
Sbjct: 394 SSE 396
Score = 69 (29.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 118 QSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHR 158
Q + S F+KF + G G I++WDTR KK +R
Sbjct: 140 QCSLKSVAFSKFERAVFSTGGRDGNIMVWDTRCNKKDGFYR 180
>UNIPROTKB|Q6P1W0 [details] [associations]
symbol:dtl "Denticleless protein homolog" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000209 "protein
polyubiquitination" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005813 "centrosome" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006513 "protein monoubiquitination" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0009411
"response to UV" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=ISS] [GO:0031465 "Cul4B-RING ubiquitin ligase complex"
evidence=ISS] [GO:0031572 "G2 DNA damage checkpoint" evidence=ISS]
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0007095 GO:GO:0009411 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006511 GO:GO:0000209
GO:GO:0031572 GO:GO:0006513 GO:GO:0031464 GO:GO:0031465
GO:GO:0019985 HOVERGEN:HBG057737 KO:K11790 CTD:51514
GeneTree:ENSGT00530000064210 HOGENOM:HOG000112290 OrthoDB:EOG4N5VWH
EMBL:CR848464 EMBL:BC064851 RefSeq:NP_989402.1 UniGene:Str.5334
ProteinModelPortal:Q6P1W0 STRING:Q6P1W0 Ensembl:ENSXETT00000031497
GeneID:395039 KEGG:xtr:395039 Xenbase:XB-GENE-985623
InParanoid:Q6P1W0 OMA:GWACQKK Bgee:Q6P1W0 Uniprot:Q6P1W0
Length = 713
Score = 109 (43.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 48/188 (25%), Positives = 71/188 (37%)
Query: 173 MSVIGTQNAHNLISISN-DGRLCSWSLEMLSS-----PQETRDLQYNNKQTKNLAVLSLA 226
++V+ Q+ H +IS DG + W L S P + Y T+ L +L
Sbjct: 220 VTVVIFQDEHTIISAGAVDGIVKVWDLRKNYSAYRQDPVPAKLFPYPGNSTRKLGYSNLV 279
Query: 227 FPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYL 286
N F C D NVY G K V + GH+ + + + D L L
Sbjct: 280 LDPTGTNLFA-SCTDDNVYMFNATGLKTEPVSVFGGHQNSTFYIKTSVSP---DGQFL-L 334
Query: 287 TSSYDWSVKLWNIKENK--PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNL 344
+ S D S +W + + K PV ++ V V W + AT V +W L
Sbjct: 335 SGSSDHSAYIWQVSDPKVPPVTLTGHCQE-VTSVAWCQSDFTKIATCSDDNTVRVWRLKR 393
Query: 345 DTEVPATS 352
+E A S
Sbjct: 394 SSEDSAQS 401
Score = 70 (29.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 118 QSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHR 158
Q + S F+KF + G G I++WDTR KK +R
Sbjct: 140 QCSLKSVAFSKFEKAVFSTGGRDGNIMVWDTRCNKKDGFYR 180
>UNIPROTKB|B4DRT0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 UniGene:Hs.16003
HGNC:HGNC:9887 ChiTaRS:RBBP4 EMBL:AK299410 IPI:IPI00983362
SMR:B4DRT0 STRING:B4DRT0 Ensembl:ENST00000544435 UCSC:uc010ohj.2
HOVERGEN:HBG103193 Uniprot:B4DRT0
Length = 173
Score = 118 (46.6 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 27/83 (32%), Positives = 44/83 (53%)
Query: 281 FSHLYL-TSSYDWSVKLWNIKENK-PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVD 338
+S L T S D +V LW+++ K +HSF +D + VQWSP N + A+ R++
Sbjct: 32 YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 91
Query: 339 LWNLNLDTEVPATSAIVEGAPAL 361
+W+L+ E + +G P L
Sbjct: 92 VWDLSKIGEEQSPEDAEDGPPEL 114
>ZFIN|ZDB-GENE-040426-1417 [details] [associations]
symbol:wdr77 "WD repeat domain 77" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-040426-1417
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 CTD:79084 HOVERGEN:HBG052458 KO:K13221
EMBL:BC056278 EMBL:BC066433 IPI:IPI00493407 RefSeq:NP_956828.1
UniGene:Dr.24325 GeneID:393506 KEGG:dre:393506 NextBio:20814532
Uniprot:Q7SZR9
Length = 319
Score = 127 (49.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 32/105 (30%), Positives = 56/105 (53%)
Query: 286 LTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLD 345
++ S D +K+W++ + ++S+N V V SP++ LF + GR+ LW+ D
Sbjct: 131 VSCSADCRIKVWDLNQETVINSYNAHSQPVSGVSCSPVDEFLFLSCAQDGRLLLWDQRKD 190
Query: 346 TEVPATSAIVEGAPALS--RVTWTP-NGTQLCVGDEKGAITMFDV 387
PAT V+ +P+ S V W P + + + GDE G +T+ D+
Sbjct: 191 K--PATRIDVQ-SPSCSPTAVVWHPQHSSTIAYGDELGRVTVKDL 232
>UNIPROTKB|F1P7U4 [details] [associations]
symbol:WDR60 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
OMA:VQCNEDN GeneTree:ENSGT00390000013743 EMBL:AAEX03010344
Ensembl:ENSCAFT00000008456 Uniprot:F1P7U4
Length = 1050
Score = 101 (40.6 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 117 CQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHR 158
C+S V CCF+ F +L+ GT G I+LWD R + +H+
Sbjct: 687 CESKVTCCCFSPFKAFLLFAGTAHGSIILWDLREDSR--IHQ 726
Score = 80 (33.2 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 30/140 (21%), Positives = 67/140 (47%)
Query: 223 LSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFS 282
L++ F +D ++F+VG + G + R + + + Y+ + V + + IDFS
Sbjct: 856 LNVKFLPSDPSHFIVGTDMGLISHGTRQDLRV-SPKLYKPQQHDVRPVRVNV----IDFS 910
Query: 283 H----LYLTSSYDWSVKLWNIKENKPVHSFNEFRD--YVMDVQWSPINPALFATVEVAGR 336
++L D S++L + P+ +N+ + V ++WS PA+F +
Sbjct: 911 PFGEPVFLAGCSDGSIRLHQLTSECPLLQWNDSTEGHAVTGLRWSLTRPAVFLAQDETSC 970
Query: 337 VDLWNLNLDTEV-PATSAIV 355
+ +W+L L++++ P ++
Sbjct: 971 IYIWDL-LESDLGPVAKQLI 989
>UNIPROTKB|H0YCT5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 PRIDE:H0YCT5 Ensembl:ENST00000460669 Bgee:H0YCT5
Uniprot:H0YCT5
Length = 180
Score = 118 (46.6 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 27/83 (32%), Positives = 44/83 (53%)
Query: 281 FSHLYL-TSSYDWSVKLWNIKENK-PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVD 338
+S L T S D +V LW+++ K +HSF +D + VQWSP N + A+ R++
Sbjct: 39 YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 98
Query: 339 LWNLNLDTEVPATSAIVEGAPAL 361
+W+L+ E + +G P L
Sbjct: 99 VWDLSKIGEEQSPEDAEDGPPEL 121
>UNIPROTKB|P93397 [details] [associations]
symbol:P93397 "Guanine nucleotide-binding protein subunit
beta-1" species:4097 "Nicotiana tabacum" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:Z84820 PIR:T04086 ProteinModelPortal:P93397
IntAct:P93397 Uniprot:P93397
Length = 377
Score = 127 (49.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 75/259 (28%), Positives = 111/259 (42%)
Query: 149 RVQKKTPVHRTPLSVMA------HTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLS 202
R Q KTPV P ++ HT V+ S+ T + ++S S DGRL W+ L+
Sbjct: 41 RSQGKTPVTFGPTDLVCCRILQGHTGKVY--SLDWTPEKNRIVSASQDGRLIVWNA--LT 96
Query: 203 SPQETRDLQYNNKQTKNLAVLSLAFPQNDVNNFVVGCEDGNVYSACRHGN------KAGN 256
S Q+T ++ V++ AF + + V C G + S C N K GN
Sbjct: 97 S-QKTHAIKLPCAW-----VMTCAFSPSGQS---VAC--GGLDSVCSIFNLNSPIDKDGN 145
Query: 257 ---VECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFN-EFR 312
GH+G V SS + D +HL +TSS D + LW+I F EF+
Sbjct: 146 HPVSRMLSGHKGYV---SSCQYVPDED-THL-ITSSGDQTCVLWDITTGLRTSVFGGEFQ 200
Query: 313 D-YVMDVQWSPI---NPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTP 368
+ DVQ I NP LF + LW+ + + T EG ++ V + P
Sbjct: 201 SGHTADVQSVSISSSNPRLFVSGSCDTTARLWDTRVASRAQRTFYGHEGD--VNTVKFFP 258
Query: 369 NGTQLCVGDEKGAITMFDV 387
+G + G E G +FD+
Sbjct: 259 DGNRFGTGSEDGTCRLFDI 277
>UNIPROTKB|Q40687 [details] [associations]
symbol:LOC_Os03g46650 "Guanine nucleotide-binding protein
subunit beta" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEP;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005783 GO:GO:0005886 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0048527 GO:GO:0009817 GO:GO:0009845
GO:GO:0009887 GO:GO:0004871 GO:GO:0010154 GO:GO:0030968
GO:GO:0009867 PRINTS:PR00319 GO:GO:0080008 HOGENOM:HOG000176356
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X89737
EMBL:AC133930 PIR:T03765 ProteinModelPortal:Q40687 IntAct:Q40687
STRING:Q40687 EnsemblPlants:LOC_Os03g46650.1 Gramene:Q40687
Uniprot:Q40687
Length = 380
Score = 126 (49.4 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 64/255 (25%), Positives = 113/255 (44%)
Query: 148 TRVQKKTPVHRTPLSVMA------HTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEML 201
+R Q +TPV P ++ H+ V+ S+ T + ++S S DGRL W+ L
Sbjct: 41 SRTQGRTPVSFNPTDLVCCRTLQGHSGKVY--SLDWTPEKNWIVSASQDGRLIVWNA--L 96
Query: 202 SSPQETRDLQYNNKQTKNLAVLSLAFPQNDVNNFVVGCEDG-NVYSACRHGNKAGNV--- 257
+S Q+T ++ + V++ AF N + G + ++++ ++ GN+
Sbjct: 97 TS-QKTHAIKLHCPW-----VMTCAFAPNGQSVACGGLDSACSIFNLNSQADRDGNIPVS 150
Query: 258 ECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFN-EFRD-YV 315
GH+G V SS Q D +TSS D + LW++ + + F EF +
Sbjct: 151 RILTGHKGYV---SS--CQYVPDQETRLITSSGDQTCVLWDVTTGQRISIFGGEFPSGHT 205
Query: 316 MDVQWSPINPA---LFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQ 372
DV IN + +F + V LW++ + + T EG ++ V + P+G +
Sbjct: 206 ADVLSLSINSSNSNMFVSGSCDATVRLWDIRIASRAVRTYHGHEGD--INSVKFFPDGQR 263
Query: 373 LCVGDEKGAITMFDV 387
G + G +FDV
Sbjct: 264 FGTGSDDGTCRLFDV 278
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 126 (49.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 57/240 (23%), Positives = 105/240 (43%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR-TP-LSVMAHTHPVFCMSVIGTQNAHNLI 185
NP++I T S ++++D T+ K P P L + H + +S + H L+
Sbjct: 135 NPHIIATKTPSSGVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGH-LL 193
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + + P+E + + T + AV+ +A+ + F +D +
Sbjct: 194 SASDDHTVCLWDIN--AGPKEGKIVDAKAVFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
Query: 245 YSACRHGNKAGNVE-CYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
N + H V LS + + +F + T S D +V LW+++ K
Sbjct: 252 MMWDTRSNTTSKPSHLVDAHTAEVNCLSFNP---YSEF--ILATGSADKTVALWDLRNLK 306
Query: 304 -PVHSFNEFRDYVMDV-QWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+H+F +D + V WSP N + A+ R+++W+L+ E + +G P L
Sbjct: 307 LKLHTFESHKDEIFQVVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 366
>UNIPROTKB|Q4V837 [details] [associations]
symbol:dtl-a "Denticleless protein homolog A" species:8355
"Xenopus laevis" [GO:0000209 "protein polyubiquitination"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006513 "protein
monoubiquitination" evidence=ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] [GO:0009411 "response to UV"
evidence=ISS] [GO:0019985 "translesion synthesis" evidence=ISS]
[GO:0031464 "Cul4A-RING ubiquitin ligase complex" evidence=ISS]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=ISS]
[GO:0031572 "G2 DNA damage checkpoint" evidence=ISS] [GO:0051726
"regulation of cell cycle" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0009411 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006511 GO:GO:0000209 GO:GO:0031572 GO:GO:0006513
GO:GO:0031464 GO:GO:0031465 GO:GO:0019985 EMBL:BC097560
RefSeq:NP_001090030.1 UniGene:Xl.78280 ProteinModelPortal:Q4V837
GeneID:735103 KEGG:xla:735103 CTD:735103 Xenbase:XB-GENE-6254292
HOVERGEN:HBG057737 KO:K11790 Uniprot:Q4V837
Length = 710
Score = 105 (42.0 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 46/183 (25%), Positives = 67/183 (36%)
Query: 173 MSVIGTQNAHNLISISN-DGRLCSWSLEMLSS-----PQETRDLQYNNKQTKNLAVLSLA 226
++V+ Q+ + +IS DG + W L S P + Y T+ L SL
Sbjct: 220 VTVVIFQDEYTIISAGAVDGVVKIWDLRKNYSAYRQDPVPVKHFPYPGNSTRKLGYSSLV 279
Query: 227 FPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYL 286
N F C D NVY G K V + GH+ + +A D L L
Sbjct: 280 LDPTGTNLFA-SCTDDNVYMFNATGLKTDPVSIFRGHQNSTFYI---KASVSPDGQFL-L 334
Query: 287 TSSYDWSVKLWNIKENK--PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNL 344
+ S D S +W + + PV ++ V V W + AT V +W L
Sbjct: 335 SGSSDHSAYIWQVSDPMAAPVTLMGHCQE-VTSVAWCQSDFTKIATCSDDNTVRVWRLKR 393
Query: 345 DTE 347
E
Sbjct: 394 SCE 396
Score = 69 (29.3 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 118 QSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHR 158
Q + S F+KF + G G I++WDTR KK +R
Sbjct: 140 QCSLKSVSFSKFERAVFSTGGRDGNIMMWDTRCSKKDGFYR 180
>ZFIN|ZDB-GENE-041010-198 [details] [associations]
symbol:thoc6 "THO complex 6 homolog (Drosophila)"
species:7955 "Danio rerio" [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041010-198 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0006397 GO:GO:0003723 GO:GO:0051028 KO:K13175 EMBL:BC083222
IPI:IPI00502677 RefSeq:NP_001006095.1 UniGene:Dr.77715
ProteinModelPortal:Q5XJS5 STRING:Q5XJS5 PRIDE:Q5XJS5
GeneID:100004014 KEGG:dre:100004014 CTD:79228 HOGENOM:HOG000008085
HOVERGEN:HBG079643 InParanoid:Q5XJS5 OrthoDB:EOG42V8GK
NextBio:20786086 ArrayExpress:Q5XJS5 Uniprot:Q5XJS5
Length = 323
Score = 123 (48.4 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 49/198 (24%), Positives = 86/198 (43%)
Query: 121 VLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVH---RTP-LSVMAHTHPVFCMSVI 176
V S F+ YL G Y G+I ++ + P L+ AH PVF S++
Sbjct: 11 VFSQSFSPCGRYLAAGNNY-GEIAVFSLSAALSPDASERSQKPILNFTAHDGPVF--SLL 67
Query: 177 GTQNAHNLISISNDGRLCSWS-LEMLSSPQETRDLQYNNKQTK-NLAVLSLAFPQNDVNN 234
T++ +L+S N G + +WS E++ + + N +T + ++ NN
Sbjct: 68 STES--HLLSAGN-GEISAWSWAELIKKSTKAAWTRKPNYETSLEIPEINAMIINPKDNN 124
Query: 235 FVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSV 294
+VG D N++ +V +GH + LS +G I L+ D +V
Sbjct: 125 LIVGGGDNNIHIMDMETGTFKSV--LKGHTDYIHCLSFKEREGEI------LSGGEDGAV 176
Query: 295 KLWNIKENKPVHSFNEFR 312
++W+ + N+PVH F+
Sbjct: 177 RIWDSRTNRPVHCIEVFK 194
>FB|FBgn0035256 [details] [associations]
symbol:CG13930 species:7227 "Drosophila melanogaster"
[GO:0003774 "motor activity" evidence=ISS] [GO:0005868 "cytoplasmic
dynein complex" evidence=ISS] [GO:0005875 "microtubule associated
complex" evidence=ISS] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0030286 "dynein complex" evidence=ISS]
[GO:0007018 "microtubule-based movement" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0007018
GO:GO:0030286 GO:GO:0042623 eggNOG:NOG145991
GeneTree:ENSGT00690000102094 RefSeq:NP_647645.1 UniGene:Dm.27034
ProteinModelPortal:Q9W0A6 SMR:Q9W0A6 EnsemblMetazoa:FBtr0072803
GeneID:38210 KEGG:dme:Dmel_CG13930 UCSC:CG13930-RA
FlyBase:FBgn0035256 InParanoid:Q9W0A6 OMA:DWCIRIW OrthoDB:EOG4QNKB8
PhylomeDB:Q9W0A6 GenomeRNAi:38210 NextBio:807540
ArrayExpress:Q9W0A6 Bgee:Q9W0A6 Uniprot:Q9W0A6
Length = 685
Score = 126 (49.4 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 35/156 (22%), Positives = 67/156 (42%)
Query: 229 QNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTS 288
Q+D+ + V ++G +Y C ++E + H+GP + +YLT
Sbjct: 487 QSDI--YYVLTDEGTLYK-CSTNYPLQHLELRQVHDGPAACMEFSPWS-----PRMYLTC 538
Query: 289 SYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEV 348
DW +++W P+ + V +WS + + ++ VD+W+L T
Sbjct: 539 GSDWCIRIWLAGILLPIVTLQHHLSPVHCARWSRTHSTILVSLS-RSTVDIWDLRNSTMK 597
Query: 349 PATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITM 384
P +S +++ + +T G L VG+E G + M
Sbjct: 598 PVSSTVIDADIFYTTFKFTHCGRSLAVGNEAGNLLM 633
Score = 45 (20.9 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 22/95 (23%), Positives = 41/95 (43%)
Query: 118 QSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVI- 176
Q PV++ F+ P L+ G ++G + + D Q P+ + + PV + I
Sbjct: 347 QVPVVTVEFSPTQPQLLAIGLHNGGVEVRDISGQDLPPLAVSQRLSSPYFEPVTAIKWIY 406
Query: 177 -----GTQNAH--NLISISNDGRLCSWSLEMLSSP 204
G +N H ++ S G + + L ++SP
Sbjct: 407 FEGDVGCRNPHITPFLATSQAGAVTKYRL--INSP 439
>UNIPROTKB|E1BJV8 [details] [associations]
symbol:LOC539953 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0031572 "G2 DNA damage checkpoint" evidence=IEA] [GO:0031465
"Cul4B-RING ubiquitin ligase complex" evidence=IEA] [GO:0031464
"Cul4A-RING ubiquitin ligase complex" evidence=IEA] [GO:0019985
"translesion synthesis" evidence=IEA] [GO:0009411 "response to UV"
evidence=IEA] [GO:0006513 "protein monoubiquitination"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005813 GO:GO:0009411
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0004842 GO:GO:0031572 GO:GO:0006513
GO:GO:0031464 GO:GO:0031465 GO:GO:0019985 KO:K11790
GeneTree:ENSGT00530000064210 OMA:ICTYFHR EMBL:DAAA02043770
IPI:IPI00695259 RefSeq:XP_003587156.1 Ensembl:ENSBTAT00000024147
GeneID:539953 KEGG:bta:539953 Uniprot:E1BJV8
Length = 730
Score = 102 (41.0 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 48/203 (23%), Positives = 74/203 (36%)
Query: 173 MSVIGTQNAHNLISISN-DGRLCSWSLEM-----LSSPQETRDLQYNNKQTKNLAVLSLA 226
++V+ Q+ + L+S DG + W L P ++ Y T+ L SL
Sbjct: 219 VTVVLFQDENTLVSAGAVDGIIKIWDLRKNYTAYRQEPIASKSFLYPGSSTRKLGYSSLI 278
Query: 227 FPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYL 286
F C D N+Y G K V + GH+ S+ + I +L
Sbjct: 279 LDSTGSTLFA-NCTDDNIYMFNMTGLKTSPVAVFSGHQN-----STFYVKSSISPDDQFL 332
Query: 287 TS-SYDWSVKLWNIKE--NKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLN 343
S S D + +W + + P ++ V V W P + AT + +W LN
Sbjct: 333 VSGSSDEAAYIWKVSMPWHPPTVLLGHSQE-VTSVCWCPSDFTKIATCSDDNTLKVWRLN 391
Query: 344 LDTEVPATSAIVEGAPALSRVTW 366
D E + G LS V W
Sbjct: 392 RDLEEKS------GGDKLSIVGW 408
Score = 71 (30.1 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 118 QSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHR 158
Q + S F+KF + G G I++WDTR KK +R
Sbjct: 140 QCSLKSVAFSKFEKAVFCTGGRDGNIMVWDTRCNKKDGFYR 180
>CGD|CAL0000862 [details] [associations]
symbol:orf19.7632 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
SMART:SM00320 CGD:CAL0000862 Gene3D:2.130.10.10 SUPFAM:SSF50978
EMBL:AACQ01000032 KO:K10415 RefSeq:XP_719392.1
ProteinModelPortal:Q5ACL0 STRING:Q5ACL0 GeneID:3639042
KEGG:cal:CaO19.7632 eggNOG:KOG1587 HOGENOM:HOG000094560
Uniprot:Q5ACL0
Length = 495
Score = 125 (49.1 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 65/288 (22%), Positives = 123/288 (42%)
Query: 126 FAKFNPYLILGGTYSGQIVLWDTRVQKKT--PVHRTPL-------SVMAHTHPVFCMSVI 176
F K+N + I+GG +G I +W+ + PV TPL S ++H + ++
Sbjct: 211 FDKYNNHRIVGGLSNGGICIWELGNSSISLMPVLSTPLYSSILRTSALSHLDKIVYLTQF 270
Query: 177 GTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLSLAF--PQNDVN- 233
++S+S DG + WS +L P+ + + + ++ + V++ + P V
Sbjct: 271 LLDGNPCILSVSRDGVVNVWSANLLVEPKLSFKIFGSTRKADDSQVMNGLYLGPDEIVGT 330
Query: 234 NFV----VGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSS 289
NF+ V DG +Y GN E HE + + S I +L ++S
Sbjct: 331 NFILDLIVATNDGRIYK--------GNGELV--HEDCLSIIGSL-----IKLDNLIISSH 375
Query: 290 YDWSVKLWNIKENKPVHSFNEF-RDYVM-DVQWSPINPALFATV---EVAGR---VDLWN 341
+W+ K+W ++ +P F + Y++ + P TV +A VD+W+
Sbjct: 376 SEWNFKIWKQQQVQP---FKDIPTPYIVRQMIIRPQRKLQLVTVGYPNLANSRYVVDIWD 432
Query: 342 LNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
L+ P T+ I+E + + + G V KG +T++ + +
Sbjct: 433 LSKKIYSPITT-IMESVDKIDDIAFNETGDTFIVV-VKGNMTVYSIDD 478
>UNIPROTKB|Q5ACL0 [details] [associations]
symbol:CaO19.7632 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
SMART:SM00320 CGD:CAL0000862 Gene3D:2.130.10.10 SUPFAM:SSF50978
EMBL:AACQ01000032 KO:K10415 RefSeq:XP_719392.1
ProteinModelPortal:Q5ACL0 STRING:Q5ACL0 GeneID:3639042
KEGG:cal:CaO19.7632 eggNOG:KOG1587 HOGENOM:HOG000094560
Uniprot:Q5ACL0
Length = 495
Score = 125 (49.1 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 65/288 (22%), Positives = 123/288 (42%)
Query: 126 FAKFNPYLILGGTYSGQIVLWDTRVQKKT--PVHRTPL-------SVMAHTHPVFCMSVI 176
F K+N + I+GG +G I +W+ + PV TPL S ++H + ++
Sbjct: 211 FDKYNNHRIVGGLSNGGICIWELGNSSISLMPVLSTPLYSSILRTSALSHLDKIVYLTQF 270
Query: 177 GTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLSLAF--PQNDVN- 233
++S+S DG + WS +L P+ + + + ++ + V++ + P V
Sbjct: 271 LLDGNPCILSVSRDGVVNVWSANLLVEPKLSFKIFGSTRKADDSQVMNGLYLGPDEIVGT 330
Query: 234 NFV----VGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSS 289
NF+ V DG +Y GN E HE + + S I +L ++S
Sbjct: 331 NFILDLIVATNDGRIYK--------GNGELV--HEDCLSIIGSL-----IKLDNLIISSH 375
Query: 290 YDWSVKLWNIKENKPVHSFNEF-RDYVM-DVQWSPINPALFATV---EVAGR---VDLWN 341
+W+ K+W ++ +P F + Y++ + P TV +A VD+W+
Sbjct: 376 SEWNFKIWKQQQVQP---FKDIPTPYIVRQMIIRPQRKLQLVTVGYPNLANSRYVVDIWD 432
Query: 342 LNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
L+ P T+ I+E + + + G V KG +T++ + +
Sbjct: 433 LSKKIYSPITT-IMESVDKIDDIAFNETGDTFIVV-VKGNMTVYSIDD 478
>UNIPROTKB|Q61Y48 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6238 "Caenorhabditis briggsae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0040035 "hermaphrodite genitalia development"
evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0017053 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0042826
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 EMBL:HE600990
ProteinModelPortal:Q61Y48 SMR:Q61Y48 STRING:Q61Y48 PRIDE:Q61Y48
EnsemblMetazoa:CBG03710 WormBase:CBG03710 Uniprot:Q61Y48
Length = 416
Score = 115 (45.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 27/83 (32%), Positives = 42/83 (50%)
Query: 281 FSHLYL-TSSYDWSVKLWNIKENK-PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVD 338
+S L T S D +V LW+++ + +HSF RD + VQWSP N + A+ R+
Sbjct: 276 YSEFILATGSADKTVALWDLRNLRLKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLH 335
Query: 339 LWNLNLDTEVPATSAIVEGAPAL 361
+W+L+ E +G P L
Sbjct: 336 VWDLSKIGEDQTAEDAEDGPPEL 358
Score = 49 (22.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 19/72 (26%), Positives = 30/72 (41%)
Query: 131 PYLILGGTYSGQIVLWDTRVQKKTPVHRT--PL-SVMAHTHPVFCMSVIGTQNAHNLI-S 186
P +I + S + ++D P T PL + HT + +S N LI S
Sbjct: 133 PTIIATKSPSADVYIFDYTKYPSVPKDNTFNPLLKLKGHTKEGYGLS--WNPNKEGLILS 190
Query: 187 ISNDGRLCSWSL 198
S+D +C W +
Sbjct: 191 ASDDQTVCHWDI 202
>UNIPROTKB|F1SQR9 [details] [associations]
symbol:NEDD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045177 "apical part of cell" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA] [GO:0000242
"pericentriolar material" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0045177
GO:GO:0005932 GO:GO:0000242 GO:GO:0000922
GeneTree:ENSGT00390000001561 EMBL:CU896549
Ensembl:ENSSSCT00000000974 OMA:XPKIASS Uniprot:F1SQR9
Length = 390
Score = 121 (47.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 35/125 (28%), Positives = 65/125 (52%)
Query: 269 GLSSHRAQGHIDFSHLYLTS-----SYDWSVKLWNIKENKPVHSFNE-FRDYVMDVQWSP 322
G S+++ H+ +S L+ S S + V LW++ P HSF+ + + +SP
Sbjct: 158 GHGSNQSVRHLKYS-LFKKSLLGSVSDNGIVTLWDVNSQSPYHSFDSAHKAPASAIGFSP 216
Query: 323 INPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAI 382
+N LF T+ + R+ L++ + ++ T +V AP L+ V + P+G L +G +G I
Sbjct: 217 VNELLFVTIGLDKRIILYDTS-SKKIVKT--LVADAP-LTAVDFMPDGATLAIGSSRGKI 272
Query: 383 TMFDV 387
+D+
Sbjct: 273 YQYDL 277
Score = 41 (19.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 20/72 (27%), Positives = 29/72 (40%)
Query: 166 HTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQT-KNLAVLS 224
HT P SV + N + L++ S+ G S P +L KQT +L S
Sbjct: 31 HTSPHGISSVCWSSNNNFLVTASSSGDKIVVS-SCKCKPVPLLELGEGQKQTCVSLNSTS 89
Query: 225 LAFPQNDVNNFV 236
+ +NN V
Sbjct: 90 MYLVSGGLNNTV 101
>TAIR|locus:2090146 [details] [associations]
symbol:AT3G15470 "AT3G15470" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 EMBL:AB022218 EMBL:AC024081 HOGENOM:HOG000239143
EMBL:AF372960 EMBL:AY081717 IPI:IPI00541904 RefSeq:NP_566515.1
UniGene:At.11977 UniGene:At.48664 ProteinModelPortal:Q9LDG7
SMR:Q9LDG7 STRING:Q9LDG7 PaxDb:Q9LDG7 PRIDE:Q9LDG7
EnsemblPlants:AT3G15470.1 GeneID:820786 KEGG:ath:AT3G15470
TAIR:At3g15470 InParanoid:Q9LDG7 OMA:GMASTEN PhylomeDB:Q9LDG7
ProtClustDB:CLSN2917135 Genevestigator:Q9LDG7 Uniprot:Q9LDG7
Length = 883
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 35/130 (26%), Positives = 68/130 (52%)
Query: 260 YEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQ 319
++GH V+ L+ ++Q HL L+SS D +V+LWN+ + F+ DYV +Q
Sbjct: 509 FQGHVDDVLDLAWSKSQ------HL-LSSSMDKTVRLWNLSSQTCLKVFSH-SDYVTCIQ 560
Query: 320 WSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEK 379
++P++ F + + +V +W++ D +V + E ++ +TP+G + VG K
Sbjct: 561 FNPVDDRYFISGSLDAKVRVWSIP-DRQVVDWYDLHE---MVTSACYTPDGQGVLVGSYK 616
Query: 380 GAITMFDVGE 389
G+ M+ +
Sbjct: 617 GSCRMYSASD 626
>UNIPROTKB|Q8WVS4 [details] [associations]
symbol:WDR60 "WD repeat-containing protein 60" species:9606
"Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 EMBL:AC004863
EMBL:AC124833 EMBL:BC014491 EMBL:AK001162 IPI:IPI00165454
RefSeq:NP_060521.4 UniGene:Hs.389945 ProteinModelPortal:Q8WVS4
SMR:Q8WVS4 IntAct:Q8WVS4 STRING:Q8WVS4 PhosphoSite:Q8WVS4
DMDM:296453073 PaxDb:Q8WVS4 PRIDE:Q8WVS4 DNASU:55112
Ensembl:ENST00000407559 GeneID:55112 KEGG:hsa:55112 UCSC:uc003woe.4
CTD:55112 GeneCards:GC07P158649 H-InvDB:HIX0007267 HGNC:HGNC:21862
HPA:HPA020607 HPA:HPA021316 neXtProt:NX_Q8WVS4 PharmGKB:PA142670594
eggNOG:NOG325464 HOGENOM:HOG000154850 HOVERGEN:HBG094160
InParanoid:Q8WVS4 OMA:VQCNEDN OrthoDB:EOG4B8JCW ChiTaRS:WDR60
GenomeRNAi:55112 NextBio:58736 ArrayExpress:Q8WVS4 Bgee:Q8WVS4
CleanEx:HS_WDR60 Genevestigator:Q8WVS4 GermOnline:ENSG00000126870
Uniprot:Q8WVS4
Length = 1066
Score = 90 (36.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 29/126 (23%), Positives = 58/126 (46%)
Query: 223 LSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFS 282
L++ F +D N+F++G + G + R + + ++ + G+ + IDFS
Sbjct: 864 LNVKFLPSDPNHFIIGTDMGLISHGTRQDLRVAP-KLFKPQQH---GIRPVKVNV-IDFS 918
Query: 283 H----LYLTSSYDWSVKLWNIKENKPVHSFNEFRDY--VMDVQWSPINPALFATVEVAGR 336
++L D S++L + P+ ++ D V +QWSP PA+F +
Sbjct: 919 PFGEPIFLAGCSDGSIRLHQLSSAFPLLQWDSSTDSHAVTGLQWSPTRPAVFLVQDDTSN 978
Query: 337 VDLWNL 342
+ +W+L
Sbjct: 979 IYIWDL 984
Score = 85 (35.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 117 CQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTR 149
C+S V CC + +L+ GT G +V+WD R
Sbjct: 695 CESQVTCCCLSPLKAFLLFAGTAHGSVVVWDLR 727
>TAIR|locus:2117169 [details] [associations]
symbol:AT4G18900 "AT4G18900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K14791 IPI:IPI00537780
RefSeq:NP_567565.1 UniGene:At.50695 ProteinModelPortal:F4JSB9
SMR:F4JSB9 PRIDE:F4JSB9 EnsemblPlants:AT4G18900.1 GeneID:827624
KEGG:ath:AT4G18900 OMA:GFDVRQA PhylomeDB:F4JSB9 Uniprot:F4JSB9
Length = 461
Score = 121 (47.7 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 222 VLSLAFPQNDVNNFVVGCEDG-----NVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQ 276
V SLA+ + ++FVV EDG +V A +++ GH+ +S +
Sbjct: 322 VESLAWDPHSEHSFVVSLEDGTVKGFDVRQASISASESNPSFTINGHDEAATSVSYN--- 378
Query: 277 GHIDFSHLYLTSSYDWSVKLWNIKENKP--VHSFNEFRDYVMDVQWSPINPALFATVEVA 334
I +L T S D +VKLW++ N+P + + N + + +SP NP L A V
Sbjct: 379 --ISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFSPDNPFLLAMGGVM 436
Query: 335 GRVDLWNLNLDTEV 348
G + LW+ DT V
Sbjct: 437 GELKLWDTLSDTNV 450
Score = 40 (19.1 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 21 DWNEEGDPGLPQLPQDLQF--DMTGDEKSSTKL 51
D +++ D P LP DL MT D+K + +L
Sbjct: 114 DHDDDSDDDPPILPTDLVIVCAMT-DDKEANRL 145
Score = 39 (18.8 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 19/88 (21%), Positives = 32/88 (36%)
Query: 64 KNRNVTYMDWSTQHPELLLA--SYHRNKEAPNEPDGVCLIWNXXXXXXXXXXXXXCQSPV 121
+N+ Y S L LA RN A D +W+ + V
Sbjct: 221 QNKEGNYKQGSHTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKE-V 279
Query: 122 LSCCFAKFNPYLILGGTYSGQIVLWDTR 149
+ + + P ++L G++ +VL D R
Sbjct: 280 QAVAWNHYAPEVLLSGSFDQTVVLKDGR 307
>UNIPROTKB|Q5ZJW8 [details] [associations]
symbol:DTL "Denticleless protein homolog" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0005813 "centrosome"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0031572 "G2
DNA damage checkpoint" evidence=ISS] [GO:0031465 "Cul4B-RING
ubiquitin ligase complex" evidence=ISS] [GO:0031464 "Cul4A-RING
ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0051726
"regulation of cell cycle" evidence=ISS] [GO:0019985 "translesion
synthesis" evidence=ISS] [GO:0009411 "response to UV" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006513 "protein monoubiquitination" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000209 "protein polyubiquitination" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0009411 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006511 GO:GO:0004842 GO:GO:0000209
GO:GO:0031572 GO:GO:0006513 GO:GO:0031464 GO:GO:0031465
GO:GO:0019985 HOVERGEN:HBG057737 KO:K11790 CTD:51514 EMBL:AJ720316
IPI:IPI00592297 RefSeq:NP_001026219.1 UniGene:Gga.20498
ProteinModelPortal:Q5ZJW8 STRING:Q5ZJW8 Ensembl:ENSGALT00000015990
GeneID:421373 KEGG:gga:421373 GeneTree:ENSGT00530000064210
HOGENOM:HOG000112290 InParanoid:Q5ZJW8 OMA:ICTYFHR
OrthoDB:EOG4N5VWH NextBio:20824150 Uniprot:Q5ZJW8
Length = 720
Score = 102 (41.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 41/177 (23%), Positives = 64/177 (36%)
Query: 173 MSVIGTQNAHNLISISN-DGRLCSWSLEM-----LSSPQETRDLQYNNKQTKNLAVLSLA 226
++V+ Q+ H LIS DG + W L P ++ Y T+ L SL
Sbjct: 216 VTVVLLQDEHTLISAGAVDGVIKVWDLRKNYAAYRQDPVPSKSFFYPGTSTRKLGYSSLV 275
Query: 227 FPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYL 286
N F C D ++Y K V + GH+ + S + D L +
Sbjct: 276 LDSTGANLFA-NCTDDSIYMFNMTSLKTFPVAVFSGHQNSTFYIKSSISP---DDQFL-V 330
Query: 287 TSSYDWSVKLWNIKE-NKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNL 342
+ S D + +W + E + P V + W P + AT V +W L
Sbjct: 331 SGSSDCNAYIWKVSEPSLPPRILVGHSQEVTSIAWCPSDFTKIATCSDDNTVRIWRL 387
Score = 68 (29.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 118 QSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHR 158
Q + S F++F + G G I++WDTR KK +R
Sbjct: 136 QCSLKSVAFSRFEKAVFCTGGRDGNIMVWDTRCNKKDGFYR 176
>TAIR|locus:2040731 [details] [associations]
symbol:AT2G37670 "AT2G37670" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AC004684 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 IPI:IPI00535445 PIR:T02533 RefSeq:NP_181303.1
UniGene:At.50121 ProteinModelPortal:O80935 SMR:O80935
EnsemblPlants:AT2G37670.1 GeneID:818344 KEGG:ath:AT2G37670
TAIR:At2g37670 HOGENOM:HOG000239143 InParanoid:O80935 OMA:GWIKVRQ
PhylomeDB:O80935 ProtClustDB:CLSN2683085 ArrayExpress:O80935
Genevestigator:O80935 Uniprot:O80935
Length = 903
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 60/232 (25%), Positives = 95/232 (40%)
Query: 163 VMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAV 222
+ AH V+ + +Q+AH L S D + W + QE +L N+ +
Sbjct: 400 IQAHEGAVWTIKF--SQDAHYLASGGADRVIHVWEV------QEC-ELMSMNEGSLTPIH 450
Query: 223 LSLAFPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEG----HEGPVVGLSSHRAQGH 278
SL + V + G S RH + V E + PV L H
Sbjct: 451 PSLCDSSGNEITVVEKKKKGKGSSGRRHNHIPDYVHVPETVFSFSDKPVCSLKGH-LDAI 509
Query: 279 IDFS----HLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVA 334
+D S L L+SS D +V+LW+I E K DYV +Q+SP++ F + +
Sbjct: 510 LDLSWSKSQLLLSSSMDKTVRLWDI-ETKTCLKLFAHNDYVTCIQFSPVDENYFLSGSLD 568
Query: 335 GRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFD 386
++ +W++ D V S + E A +TP+G +G KG +D
Sbjct: 569 AKIRIWSIQ-DRHVVEWSDLHEMVTA---ACYTPDGQGALIGSHKGICRAYD 616
>ZFIN|ZDB-GENE-060929-156 [details] [associations]
symbol:eml1 "echinoderm microtubule associated
protein like 1" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-060929-156 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR011047 SUPFAM:SSF50998 CTD:2009 InterPro:IPR005108
Pfam:PF03451 GeneTree:ENSGT00550000074369 EMBL:BX546478
IPI:IPI00866085 RefSeq:NP_001180527.1 UniGene:Dr.80188
Ensembl:ENSDART00000126414 GeneID:767643 KEGG:dre:767643
NextBio:20918037 Uniprot:E7EXY5
Length = 813
Score = 106 (42.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 35/132 (26%), Positives = 57/132 (43%)
Query: 261 EGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQW 320
+GH + GL+ H H +LT +D + LW+ ++P+ + D +
Sbjct: 538 QGHTDELWGLTIH------PLKHQFLTCGHDKHIYLWDSDSHQPIWT-KTLEDSAQSAGF 590
Query: 321 SPINPALFATVEVAGRVDLWNLNLDTEVPATSAI-VEGAPALSRVTWTPNGTQLCVGDEK 379
P ATV V + W L LDTE + +G LS + ++P+G L +G
Sbjct: 591 HPSG----ATVAVGMQTGRW-LVLDTESKDLVTVHTDGNEQLSVIRFSPDGNFLAIGSHD 645
Query: 380 GAITMFDVGEVG 391
I ++ V E G
Sbjct: 646 NYIYIYAVAENG 657
Score = 64 (27.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 24/88 (27%), Positives = 37/88 (42%)
Query: 183 NLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLSLAFPQNDVNNFVVGCEDG 242
N+I LC WSLE S ++ + KQ K VL + F +N + + G G
Sbjct: 384 NIIVTCGKSHLCFWSLEKGSLVKKQGLFE---KQEKPKFVLCVTFSEN--GDAITGDSSG 438
Query: 243 NVYSACRHGNKAGNVECYEGHEGPVVGL 270
N+ + N+ ++ HE V L
Sbjct: 439 NILVWGKGSNRI-SLAIQGAHEASVFAL 465
>TAIR|locus:2100267 [details] [associations]
symbol:AT3G01340 "AT3G01340" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006886 "intracellular
protein transport" evidence=ISS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006900 "membrane budding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 EMBL:CP002686 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 EMBL:AC010676
HOGENOM:HOG000216895 KO:K14004 ProtClustDB:CLSN2683847
EMBL:AF370262 EMBL:AY063079 IPI:IPI00528696 RefSeq:NP_001030616.1
RefSeq:NP_186783.1 UniGene:At.18565 ProteinModelPortal:Q9SRI1
SMR:Q9SRI1 IntAct:Q9SRI1 STRING:Q9SRI1 PRIDE:Q9SRI1 ProMEX:Q9SRI1
DNASU:821216 EnsemblPlants:AT3G01340.1 EnsemblPlants:AT3G01340.2
GeneID:821216 KEGG:ath:AT3G01340 TAIR:At3g01340 InParanoid:Q9SRI1
OMA:KIDQAHP PhylomeDB:Q9SRI1 ArrayExpress:Q9SRI1
Genevestigator:Q9SRI1 Uniprot:Q9SRI1
Length = 302
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 59/247 (23%), Positives = 105/247 (42%)
Query: 157 HRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQ 216
HR P+ +A HP F G+ L S S DG++ W + Q T+ + + +
Sbjct: 55 HRGPVWQVAWAHPKF-----GSL----LASCSYDGQIILWKEG--NQNQWTQAHVFTDHK 103
Query: 217 TKNLAVLSLAFPQNDVN-NFVVGCEDGN--VYSACRHGNKAGNVECYEGHEGPVVGLSSH 273
++V S+A+ +++ + G DGN V+SA G + + H V +S
Sbjct: 104 ---VSVNSIAWAPHELGLSLACGASDGNISVFSARADGGW-DTTKIDQAHPVGVTSVSWA 159
Query: 274 RA--------QGHIDFSHLYLTSSYDWSVKLWNIKENK-PVHSF---NEFRDYVMDVQWS 321
A G ID + + D +VK+W + F N+ D+V DV W+
Sbjct: 160 PATEPGALVSSGMIDPVYKLASGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWA 219
Query: 322 P---INPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDE 378
P + + A+ G+V +W + + E + + + + RV+W+ G L V D
Sbjct: 220 PNLGLPKSTIASGSEDGKVIIWTIGKEGEQWEGTVLKDFKTPVWRVSWSLTGNLLAVSDG 279
Query: 379 KGAITMF 385
+T++
Sbjct: 280 NNNVTVW 286
>TAIR|locus:2028539 [details] [associations]
symbol:AT1G48870 species:3702 "Arabidopsis thaliana"
[GO:0000159 "protein phosphatase type 2A complex" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IEA;ISS] [GO:0008601 "protein phosphatase type 2A
regulator activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR000009 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PRINTS:PR00600 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GO:GO:0007165 GO:GO:0000159
GO:GO:0008601 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC084414 HSSP:P16649 HOGENOM:HOG000239143
EMBL:DQ446345 IPI:IPI00522109 PIR:E96526 RefSeq:NP_175318.1
UniGene:At.52083 ProteinModelPortal:Q9FVP7 SMR:Q9FVP7
EnsemblPlants:AT1G48870.1 GeneID:841309 KEGG:ath:AT1G48870
TAIR:At1g48870 InParanoid:Q9FVP7 OMA:KKSHVEL PhylomeDB:Q9FVP7
ProtClustDB:CLSN2914209 ArrayExpress:Q9FVP7 Genevestigator:Q9FVP7
Uniprot:Q9FVP7
Length = 593
Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
Identities = 37/130 (28%), Positives = 66/130 (50%)
Query: 258 ECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMD 317
E Y GH G V+ L+ D S+L L++S D +V+LW ++ +H F+ +YV
Sbjct: 267 ELY-GHTGDVLDLAWS------D-SNLLLSASKDKTVRLWRTGCDQCLHVFHH-NNYVTC 317
Query: 318 VQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGD 377
V+++P+N FA+ + G+ +W L+ + V T ++S +++ PNG VG
Sbjct: 318 VEFNPVNKNNFASGSIDGKARIWGLSEERVVAWTDV----RDSISAISYQPNGNGFVVGC 373
Query: 378 EKGAITMFDV 387
G + +
Sbjct: 374 ITGNCRFYQI 383
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 120 (47.3 bits), Expect = 0.00025, P = 0.00025
Identities = 55/239 (23%), Positives = 107/239 (44%)
Query: 130 NPYLILGGTYSGQIVLWD-TR-VQKKTPVHR--TPLSVMAHTHPVFCMSVIGTQNAHNLI 185
NP +I T S ++++D T+ K P + L + H + +S + + L+
Sbjct: 136 NPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNSDLHLRGHQKEGYGLSWNPYLSGY-LL 194
Query: 186 SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLS-LAFPQNDVNNFVVGCEDGNV 244
S S+D +C W + + P+E + + T + AV+ +++ + F +D +
Sbjct: 195 SASDDHTICLWDISAV--PKEGKVVGAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 245 YS-ACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK 303
R N + + + V LS + + +F + + S D +V LW+++ K
Sbjct: 253 MIWDTRSNNTSKPSHSVDAYTAEVNCLSFNP---NSEF--ILASGSPDKTVALWDLRNLK 307
Query: 304 -PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPAL 361
+HSF +D + VQWSP N + A+ R+++W+L+ E + +G P L
Sbjct: 308 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
>TAIR|locus:2161253 [details] [associations]
symbol:MSI1 "MULTICOPY SUPRESSOR OF IRA1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0043234 "protein complex"
evidence=IPI] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=RCA;IMP]
[GO:0009909 "regulation of flower development" evidence=RCA;IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0010214 "seed coat development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0009555 "pollen development" evidence=IGI;IMP] [GO:0045787
"positive regulation of cell cycle" evidence=IGI;RCA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IPI]
[GO:0006275 "regulation of DNA replication" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=RCA]
[GO:0016570 "histone modification" evidence=RCA] [GO:0048449
"floral organ formation" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009555 GO:GO:0010214 GO:GO:0008283
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 EMBL:AB019228 GO:GO:0009793 GO:GO:0009908
GO:GO:0048366 GO:GO:0009909 GO:GO:0006349 GO:GO:0016585
GO:GO:0045787 GO:GO:0031507 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 GO:GO:0010026 HOGENOM:HOG000160330
OMA:DGFLLHV EMBL:AF016846 EMBL:AY059874 EMBL:AY114646
IPI:IPI00535841 RefSeq:NP_200631.1 UniGene:At.49185
UniGene:At.66738 ProteinModelPortal:O22467 SMR:O22467
DIP:DIP-33481N IntAct:O22467 STRING:O22467 PaxDb:O22467
PRIDE:O22467 EnsemblPlants:AT5G58230.1 GeneID:835935
KEGG:ath:AT5G58230 GeneFarm:2813 TAIR:At5g58230 InParanoid:O22467
PhylomeDB:O22467 ProtClustDB:CLSN2683757 Genevestigator:O22467
GermOnline:AT5G58230 Uniprot:O22467
Length = 424
Score = 97 (39.2 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 23/77 (29%), Positives = 45/77 (58%)
Query: 287 TSSYDWSVKLWNIKE-NKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLN-L 344
T S D +VKL+++++ + +H+F+ ++ V V W+P N + A+ + R+ +W+L+ +
Sbjct: 291 TGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRI 350
Query: 345 DTEVPATSAIVEGAPAL 361
D E A +G P L
Sbjct: 351 DEEQTVEDA-EDGPPEL 366
Score = 65 (27.9 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 18/73 (24%), Positives = 38/73 (52%)
Query: 130 NPYLILGGTYSGQIVLWD-TRVQKKTPVHRT--P-LSVMAHTHPVFCMSVIGTQNAHNLI 185
NP++I T + ++ ++D ++ K P+ P L + H+ + +S + H L+
Sbjct: 137 NPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSEGYGLSWSKFKQGH-LL 195
Query: 186 SISNDGRLCSWSL 198
S S+D ++C W +
Sbjct: 196 SGSDDAQICLWDI 208
Score = 63 (27.2 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 33/123 (26%), Positives = 48/123 (39%)
Query: 126 FAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIGTQNAHNLI 185
++KF +L G+ QI LWD K AH V + H +
Sbjct: 186 WSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVV---EDVAWHLRHEYL 242
Query: 186 --SISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLSLAFPQNDVNNFVV--GCED 241
S+ +D L W L SP ++ +Q + ++ V LAF N N +VV G D
Sbjct: 243 FGSVGDDQYLLIWDLR---SPSASKPVQ--SVVAHSMEVNCLAF--NPFNEWVVATGSTD 295
Query: 242 GNV 244
V
Sbjct: 296 KTV 298
>UNIPROTKB|G4MUL1 [details] [associations]
symbol:MGG_07284 "Target-rapamycin complex subunit LST8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0001558 "regulation of cell growth"
evidence=ISS] [GO:0006810 "transport" evidence=ISS] [GO:0007165
"signal transduction" evidence=ISS] [GO:0010008 "endosome membrane"
evidence=ISS] [GO:0030295 "protein kinase activator activity"
evidence=ISS] [GO:0030950 "establishment or maintenance of actin
cytoskeleton polarity" evidence=ISS] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=ISS] [GO:0031505
"fungal-type cell wall organization" evidence=ISS] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=ISS] [GO:0031931
"TORC1 complex" evidence=ISS] [GO:0031932 "TORC2 complex"
evidence=ISS] [GO:0045860 "positive regulation of protein kinase
activity" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0000139 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558 GO:GO:0031929
GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030295
GO:GO:0010008 GO:GO:0031930 GO:GO:0031505 GO:GO:0031931
GO:GO:0030950 EMBL:CM001232 GO:GO:0031932 GO:GO:0031234 KO:K08266
RefSeq:XP_003715510.1 ProteinModelPortal:G4MUL1
EnsemblFungi:MGG_07284T0 GeneID:2683030 KEGG:mgr:MGG_07284
Uniprot:G4MUL1
Length = 317
Score = 117 (46.2 bits), Expect = 0.00032, P = 0.00032
Identities = 38/131 (29%), Positives = 66/131 (50%)
Query: 260 YEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQ 319
+EGH G V G++ H +G +TSS D +VK+W + S+N + V DV
Sbjct: 71 FEGHTGNVTGVAFH-CEGK-----WMVTSSEDGTVKIWETRTGTIQRSYNH-QSPVNDVV 123
Query: 320 WSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIV-EGAPALSRVTWTPNGTQLCVGDE 378
P N + + AG + LW+L D + TS +V E ++S +T +G+ LC +
Sbjct: 124 IHP-NQGEIISCDRAGTIRLWDL-ADNK--CTSEMVPEEDVSVSSLTVATDGSLLCAANN 179
Query: 379 KGAITMFDVGE 389
+G + ++ + +
Sbjct: 180 RGNVFVWTLSQ 190
>FB|FBgn0035922 [details] [associations]
symbol:Pex7 "Peroxin 7" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006911 EMBL:AE014296 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016558 KO:K13341
OMA:GHEYAVR GO:GO:0005053 PANTHER:PTHR22850:SF4
GeneTree:ENSGT00700000104578 RefSeq:NP_001137914.1
RefSeq:NP_648251.1 UniGene:Dm.15472 SMR:Q9VSN7 DIP:DIP-21383N
IntAct:Q9VSN7 MINT:MINT-790667 STRING:Q9VSN7
EnsemblMetazoa:FBtr0076568 EnsemblMetazoa:FBtr0273328 GeneID:38994
KEGG:dme:Dmel_CG6486 UCSC:CG6486-RA FlyBase:FBgn0035922
InParanoid:Q9VSN7 OrthoDB:EOG431ZDN ChiTaRS:CG6486 GenomeRNAi:38994
NextBio:811365 Uniprot:Q9VSN7
Length = 339
Score = 117 (46.2 bits), Expect = 0.00036, P = 0.00036
Identities = 35/130 (26%), Positives = 62/130 (47%)
Query: 266 PVVGLSSHRAQGH-IDFS-----HLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQ 319
P++ L H+ + + +D+ H L+ S+D ++KLW+ + +F D + +
Sbjct: 115 PLICLQEHKNEVYSLDWGEKWNYHTLLSGSWDCTLKLWDCNRQNSITTFVGHNDLIYGAK 174
Query: 320 WSPINPALFATVEVAGRVDLWNLNLD-TEVPATSAIVEGAPALSRVTWTP-NGTQLCVGD 377
+SP+ LFA+V G ++LWN +LD P S + AL W+ + L G
Sbjct: 175 FSPLIANLFASVSTDGHLNLWN-SLDFAGKPLMSIEAHASEALC-CDWSHFDRNVLVTGG 232
Query: 378 EKGAITMFDV 387
G I +D+
Sbjct: 233 SDGLIRGWDL 242
>UNIPROTKB|F5GZ90 [details] [associations]
symbol:DTL "Denticleless protein homolog" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AL606468 EMBL:AC092814 EMBL:AL592297
HGNC:HGNC:30288 IPI:IPI01011401 ProteinModelPortal:F5GZ90
SMR:F5GZ90 Ensembl:ENST00000542077 UCSC:uc010ptb.2
ArrayExpress:F5GZ90 Bgee:F5GZ90 Uniprot:F5GZ90
Length = 688
Score = 95 (38.5 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 46/201 (22%), Positives = 70/201 (34%)
Query: 173 MSVIGTQNAHNLISISN-DGRLCSWSLEM-----LSSPQETRDLQYNNKQTKNLAVLSLA 226
++V+ Q+ + L+S DG + W L P ++ Y T+ L SL
Sbjct: 177 VTVVLFQDENTLVSAGAVDGIIKVWDLRKNYTAYRQEPIASKSFLYPGSSTRKLGYSSLI 236
Query: 227 FPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYL 286
F C D N+Y G K V + GH+ + S + D L +
Sbjct: 237 LDSTGSTLFA-NCTDDNIYMFNMTGLKTSPVAIFNGHQNSTFYVKSSLSP---DDQFL-V 291
Query: 287 TSSYDWSVKLWNIKEN-KPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLD 345
+ S D + +W + +P V V W P + AT + +W LN
Sbjct: 292 SGSSDEAAYIWKVSTPWQPPTVLLGHSQEVTSVCWCPSDFTKIATCSDDNTLKIWRLNRG 351
Query: 346 TEVPATSAIVEGAPALSRVTW 366
E G LS V W
Sbjct: 352 LEEKP------GGDKLSTVGW 366
Score = 71 (30.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 118 QSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHR 158
Q + S F+KF + G G I++WDTR KK +R
Sbjct: 98 QCSLKSVAFSKFEKAVFCTGGRDGNIMVWDTRCNKKDGFYR 138
>CGD|CAL0005039 [details] [associations]
symbol:orf19.3467 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0005039
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
EMBL:AACQ01000154 InterPro:IPR016453 PIRSF:PIRSF005567
RefSeq:XP_712507.1 RefSeq:XP_712537.1 ProteinModelPortal:Q59S73
STRING:Q59S73 GeneID:3645845 GeneID:3645870 KEGG:cal:CaO19.10971
KEGG:cal:CaO19.3467 Uniprot:Q59S73
Length = 939
Score = 122 (48.0 bits), Expect = 0.00045, P = 0.00045
Identities = 42/157 (26%), Positives = 72/157 (45%)
Query: 233 NNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDW 292
N VVG +D + + N V +E H + ++ H ++ +I LTSS D
Sbjct: 68 NWIVVGSDDFQI--RVYNYNTGEKVTQFEAHPDYIRSIAVHPSKPYI------LTSSDDL 119
Query: 293 SVKLWNIKEN-KPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPAT 351
++KLWN N K +F + YVM V ++P +P FA+ + V +W+L + P
Sbjct: 120 TIKLWNWDHNWKLEQTFEGHQHYVMSVNFNPKDPNTFASACLDRTVKIWSLG--SSQPNF 177
Query: 352 SAIVEGAPALSRVTWTPNGTQ--LCVGDEKGAITMFD 386
+ I A ++ V + P + L + I ++D
Sbjct: 178 TLIAHEAKGVNYVDYYPQADKPYLITSSDDKTIKVWD 214
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 117 (46.2 bits), Expect = 0.00047, P = 0.00047
Identities = 49/175 (28%), Positives = 76/175 (43%)
Query: 219 NLAVLSLAFPQNDVN-NFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVG-LSSH-RA 275
N A + F + N V GN+ ++ H V+ +E V G +H +A
Sbjct: 48 NQAARCIRFASHSAPVNGVAWSPKGNLVASAGHDR---TVKIWEPKLRGVSGEFVAHSKA 104
Query: 276 QGHIDFS---HLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVE 332
+DF HL LT+S D S K+W + + V SF + ++V ++SP N L AT
Sbjct: 105 VRSVDFDSTGHLMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSP-NGKLVATAS 163
Query: 333 VAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDV 387
V +++++ E T AP ++ W P G L V I +FDV
Sbjct: 164 DDKSVRIYDVD-SGECVRTFTEERAAPR--QLAWHPWGNMLAVALGCNRIKIFDV 215
>UNIPROTKB|Q9NZJ0 [details] [associations]
symbol:DTL "Denticleless protein homolog" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0009411 "response to UV" evidence=IDA]
[GO:0019985 "translesion synthesis" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IDA] [GO:0006513
"protein monoubiquitination" evidence=IDA] [GO:0031464 "Cul4A-RING
ubiquitin ligase complex" evidence=IDA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0031572 "G2 DNA damage checkpoint"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IDA;TAS] [GO:0000209 "protein polyubiquitination"
evidence=IDA;TAS] [GO:0031465 "Cul4B-RING ubiquitin ligase complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 GO:GO:0009411 EMBL:CH471100 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
GO:GO:0031965 eggNOG:COG2319 GO:GO:0006511 GO:GO:0000209
GO:GO:0031572 GO:GO:0006513 GO:GO:0031464 GO:GO:0031465
GO:GO:0019985 HOVERGEN:HBG057737 KO:K11790 CTD:51514 OMA:ICTYFHR
OrthoDB:EOG4N5VWH EMBL:AF345896 EMBL:DQ641253 EMBL:AF195765
EMBL:AK000742 EMBL:AK001206 EMBL:AK001261 EMBL:AK027651
EMBL:AK292343 EMBL:AL606468 EMBL:AC092814 EMBL:AL592297
EMBL:BC033540 EMBL:BC033297 IPI:IPI00643808 IPI:IPI00827740
RefSeq:NP_057532.2 UniGene:Hs.656473 ProteinModelPortal:Q9NZJ0
SMR:Q9NZJ0 IntAct:Q9NZJ0 STRING:Q9NZJ0 PhosphoSite:Q9NZJ0
DMDM:302393825 PaxDb:Q9NZJ0 PRIDE:Q9NZJ0 DNASU:51514
Ensembl:ENST00000366991 GeneID:51514 KEGG:hsa:51514 UCSC:uc001hiz.4
GeneCards:GC01P212208 H-InvDB:HIX0020157 HGNC:HGNC:30288
HPA:HPA028016 MIM:610617 neXtProt:NX_Q9NZJ0 PharmGKB:PA142671941
InParanoid:Q9NZJ0 GenomeRNAi:51514 NextBio:55210
ArrayExpress:Q9NZJ0 Bgee:Q9NZJ0 CleanEx:HS_DTL
Genevestigator:Q9NZJ0 Uniprot:Q9NZJ0
Length = 730
Score = 95 (38.5 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 46/201 (22%), Positives = 70/201 (34%)
Query: 173 MSVIGTQNAHNLISISN-DGRLCSWSLEM-----LSSPQETRDLQYNNKQTKNLAVLSLA 226
++V+ Q+ + L+S DG + W L P ++ Y T+ L SL
Sbjct: 219 VTVVLFQDENTLVSAGAVDGIIKVWDLRKNYTAYRQEPIASKSFLYPGSSTRKLGYSSLI 278
Query: 227 FPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYL 286
F C D N+Y G K V + GH+ + S + D L +
Sbjct: 279 LDSTGSTLFA-NCTDDNIYMFNMTGLKTSPVAIFNGHQNSTFYVKSSLSP---DDQFL-V 333
Query: 287 TSSYDWSVKLWNIKEN-KPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLD 345
+ S D + +W + +P V V W P + AT + +W LN
Sbjct: 334 SGSSDEAAYIWKVSTPWQPPTVLLGHSQEVTSVCWCPSDFTKIATCSDDNTLKIWRLNRG 393
Query: 346 TEVPATSAIVEGAPALSRVTW 366
E G LS V W
Sbjct: 394 LEEKP------GGDKLSTVGW 408
Score = 71 (30.1 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 118 QSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHR 158
Q + S F+KF + G G I++WDTR KK +R
Sbjct: 140 QCSLKSVAFSKFEKAVFCTGGRDGNIMVWDTRCNKKDGFYR 180
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 107 (42.7 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 41/169 (24%), Positives = 71/169 (42%)
Query: 229 QNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTS 288
+N+V+ F D +Y C+ G + + + GH+G V G L +
Sbjct: 416 RNNVS-FATSSTDSMIY-LCKIG-ETRPAKTFTGHQGEV-NCVKWDPTGS-----LLASC 466
Query: 289 SYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPAL--------FATVEVAGRVDLW 340
S D + K+WNIK++ VH E + ++WSP P A+ V LW
Sbjct: 467 SDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLW 526
Query: 341 NLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAITMFDVGE 389
+ L + + + E P S + ++PNG + G +I ++ + E
Sbjct: 527 DAELGKMLCSFNGHRE--PVYS-LAFSPNGEYIASGSLDKSIHIWSIKE 572
Score = 56 (24.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 22/89 (24%), Positives = 37/89 (41%)
Query: 64 KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNXXXXXXXXXXXXXCQSPVLS 123
K+++VT +DW+ + LLA+ DG IW + P+ S
Sbjct: 323 KSKDVTTLDWNGEGT--LLAT--------GSCDGQARIWTLNGELISTLSKH--KGPIFS 370
Query: 124 CCFAKFNPYLILGGTYSGQIVLWDTRVQK 152
+ K YL L G+ V+WD + ++
Sbjct: 371 LKWNKKGDYL-LTGSVDRTAVVWDVKAEE 398
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 117 (46.2 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 39/132 (29%), Positives = 60/132 (45%)
Query: 256 NVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYV 315
N+ CY+GH PV AQ F H + + S+D + ++W++ +P+ V
Sbjct: 452 NLVCYKGHNYPVWD-----AQ-FSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDV 505
Query: 316 MDVQWSPINPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCV 375
VQW P N AT V LW++ T I + LS + +P+G +
Sbjct: 506 DCVQWHP-NCNYIATGSSDKTVRLWDVQ--TGECVRIFIGHRSMVLS-LAMSPDGRYMAS 561
Query: 376 GDEKGAITMFDV 387
GDE G I M+D+
Sbjct: 562 GDEDGTIMMWDL 573
Score = 46 (21.3 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 157 HRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRL 193
+R LS +A F + + T N N SIS+DG L
Sbjct: 331 NRVQLSSVAMPSVSF-YTFVNTHNGLNCSSISHDGSL 366
>UNIPROTKB|F1P0W9 [details] [associations]
symbol:NEDD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000242 "pericentriolar material" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0045177 "apical part of cell" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0045177
GO:GO:0005932 GO:GO:0000242 GO:GO:0000922
GeneTree:ENSGT00390000001561 OMA:FSPIRDD EMBL:AADN02005960
EMBL:AADN02005961 EMBL:AADN02005962 IPI:IPI00592551
Ensembl:ENSGALT00000018716 Uniprot:F1P0W9
Length = 671
Score = 116 (45.9 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 35/124 (28%), Positives = 63/124 (50%)
Query: 269 GLSSHRAQGHIDFSHL---YLTSSYD-WSVKLWNIKENKPVHSF-NEFRDYVMDVQWSPI 323
G +S + H+ +S L S D +V LW++ P +F N + ++ +SP+
Sbjct: 158 GYNSSQPIRHLKYSSFKKSLLGSVSDSGNVTLWDVNTQNPYRNFENTHKAPASEICFSPV 217
Query: 324 NPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEKGAIT 383
N L TV + R++L++ + ++ T IV P L+ V + P+GT L +G +G I
Sbjct: 218 NELLLVTVGLDKRINLYDTS-SKKLLTT--IVADHP-LTTVNFMPDGTTLTIGSSRGKIC 273
Query: 384 MFDV 387
+D+
Sbjct: 274 QYDL 277
Score = 47 (21.6 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 21/80 (26%), Positives = 35/80 (43%)
Query: 120 PVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIGTQ 179
PV S C+A N +L+ +IV+ K PV PL +A C+S+ +
Sbjct: 36 PVSSLCWASNNSFLVSASAAGDKIVVSSC---KSKPV---PLFEIAEGAKQTCVSL--SS 87
Query: 180 NAHNLISISNDGRLCSWSLE 199
++ + S D + W L+
Sbjct: 88 SSLYVASGGLDSTVHIWDLK 107
>TAIR|locus:2045648 [details] [associations]
symbol:AT2G30050 "AT2G30050" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005643 "nuclear pore"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0006900
"membrane budding" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005643 EMBL:AC004680 EMBL:AC004165 UniGene:At.25577
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE EMBL:AF412112
EMBL:AY124848 IPI:IPI00529872 PIR:T00593 RefSeq:NP_180566.1
UniGene:At.74333 ProteinModelPortal:O64740 SMR:O64740 IntAct:O64740
STRING:O64740 PaxDb:O64740 PRIDE:O64740 ProMEX:O64740
EnsemblPlants:AT2G30050.1 GeneID:817556 KEGG:ath:AT2G30050
TAIR:At2g30050 InParanoid:O64740 PhylomeDB:O64740
ProtClustDB:CLSN2683847 ArrayExpress:O64740 Genevestigator:O64740
Uniprot:O64740
Length = 302
Score = 114 (45.2 bits), Expect = 0.00063, P = 0.00063
Identities = 56/246 (22%), Positives = 105/246 (42%)
Query: 157 HRTPLSVMAHTHPVFCMSVIGTQNAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQ 216
HR P+ +A HP + S+ L S S DG++ W + Q T+D + + +
Sbjct: 55 HRGPVWEVAWAHPKYG-SI--------LASCSYDGQVILWKEG--NQNQWTQDHVFTDHK 103
Query: 217 TKNLAVLSLAFPQNDVN-NFVVGCEDGN--VYSACRHG-------NKAGNVECYEGHEGP 266
+ +V S+A+ +D+ + G DGN V++A G ++A V P
Sbjct: 104 S---SVNSIAWAPHDIGLSLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP 160
Query: 267 VVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENK-PVHSF---NEFRDYVMDVQWSP 322
+ + G +D + + D +VK+W + + F + D+V DV W+P
Sbjct: 161 ATAPGALVSSGLLDPVYKLASGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAP 220
Query: 323 ---INPALFATVEVAGRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVGDEK 379
+ + A+ G+V +W + + E + + + RV+W+ G L V D
Sbjct: 221 NLGLPKSTIASGSQDGKVIIWTVGKEGEQWEGKVLKDFMTPVWRVSWSLTGNLLAVSDGN 280
Query: 380 GAITMF 385
+T++
Sbjct: 281 NNVTVW 286
>WB|WBGene00003036 [details] [associations]
symbol:lin-53 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070176 "DRM
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0045892 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330 EMBL:AF116530
EMBL:Z81097 EMBL:AL023833 PIR:T23391 RefSeq:NP_492552.1
UniGene:Cel.19610 ProteinModelPortal:P90916 SMR:P90916
IntAct:P90916 MINT:MINT-114323 STRING:P90916 PaxDb:P90916
EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2 GeneID:172802
KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802 WormBase:K07A1.12
InParanoid:P90916 OMA:DGFLLHV NextBio:877063 GO:GO:0070176
Uniprot:P90916
Length = 417
Score = 116 (45.9 bits), Expect = 0.00067, P = 0.00067
Identities = 27/83 (32%), Positives = 43/83 (51%)
Query: 281 FSHLYL-TSSYDWSVKLWNIKENK-PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVD 338
+S L T S D +V LW+++ + +HSF RD + VQWSP N + A+ R+
Sbjct: 276 YSEFILATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLH 335
Query: 339 LWNLNLDTEVPATSAIVEGAPAL 361
+W+L+ E + +G P L
Sbjct: 336 VWDLSKIGEDQSAEDAEDGPPEL 358
>UNIPROTKB|P90916 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0070176
"DRM complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0017053
"transcriptional repressor complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0001708 GO:GO:0009792 GO:GO:0006915 GO:GO:0045892
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GO:GO:0040027 GeneTree:ENSGT00570000079069 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330
EMBL:AF116530 EMBL:Z81097 EMBL:AL023833 PIR:T23391
RefSeq:NP_492552.1 UniGene:Cel.19610 ProteinModelPortal:P90916
SMR:P90916 IntAct:P90916 MINT:MINT-114323 STRING:P90916
PaxDb:P90916 EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2
GeneID:172802 KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802
WormBase:K07A1.12 InParanoid:P90916 OMA:DGFLLHV NextBio:877063
GO:GO:0070176 Uniprot:P90916
Length = 417
Score = 116 (45.9 bits), Expect = 0.00067, P = 0.00067
Identities = 27/83 (32%), Positives = 43/83 (51%)
Query: 281 FSHLYL-TSSYDWSVKLWNIKENK-PVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVD 338
+S L T S D +V LW+++ + +HSF RD + VQWSP N + A+ R+
Sbjct: 276 YSEFILATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLH 335
Query: 339 LWNLNLDTEVPATSAIVEGAPAL 361
+W+L+ E + +G P L
Sbjct: 336 VWDLSKIGEDQSAEDAEDGPPEL 358
>DICTYBASE|DDB_G0270992 [details] [associations]
symbol:sec31 "putative transport protein"
species:44689 "Dictyostelium discoideum" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030127 "COPII
vesicle coat" evidence=ISS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=ISS] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0012507 "ER to Golgi transport vesicle membrane"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004098
InterPro:IPR015943 Pfam:PF00400 Pfam:PF02840 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0270992 GO:GO:0006886
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 GO:GO:0005681 GO:GO:0006888
GO:GO:0030127 eggNOG:NOG248389 KO:K14005 RefSeq:XP_646396.1
ProteinModelPortal:Q55CT5 STRING:Q55CT5 PRIDE:Q55CT5
EnsemblProtists:DDB0235185 GeneID:8617351 KEGG:ddi:DDB_G0270992
OMA:MMNQPPM Uniprot:Q55CT5
Length = 1355
Score = 122 (48.0 bits), Expect = 0.00069, P = 0.00069
Identities = 62/259 (23%), Positives = 102/259 (39%)
Query: 120 PVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHRTPLSVMAHTHPVFCMSVIGTQ 179
PV S F NP L+ G ++ +WD P P S + + C++ +
Sbjct: 131 PVQSIDFNVQNPNLLASGGSDSEVFIWDLS-DPTQPSALNPGSKSQQSSDITCVAW-NKK 188
Query: 180 NAHNLISISNDGRLCSWSLEMLSSPQETRDLQYNNKQTKNLAVLSLAFPQNDVNNFVVGC 239
AH L S S +G + W L+ + D N++ K S+ + ++ V
Sbjct: 189 VAHILGSASYNGYIVIWDLKSKKTLMTIND---RNRKCK---YRSIVWHPSEATQIVAAS 242
Query: 240 EDGN--VYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVK-- 295
ED + V A N V+ EGH+ V GLS + + S ++ W+
Sbjct: 243 EDDDHPVIQAWDLRNTTSPVKSMEGHKKGVWGLSWCPSDNALLLSTGKDNKTFCWNFDRQ 302
Query: 296 --LWNIKENKPVHSFNEFRD---------------YVMDVQWSPINPALFATVEVAGRVD 338
L I +N ++ N + + +VQWSP PAL +T G+V+
Sbjct: 303 EILCEINDNNSRNNINNNSNNSNSDNNNGNTDPNAWNFEVQWSPRVPALLSTSSYVGKVN 362
Query: 339 LWNLNLDTEVPATSAIVEG 357
+++L D +TS G
Sbjct: 363 VYSLQ-DVNEKSTSGSSAG 380
>RGD|621066 [details] [associations]
symbol:Eml2 "echinoderm microtubule associated protein like 2"
species:10116 "Rattus norvegicus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011041 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:621066 GO:GO:0005737
GO:GO:0003824 Gene3D:2.130.10.10 PROSITE:PS00678 eggNOG:COG2319
GO:GO:0005102 GO:GO:0008152 InterPro:IPR011047 SUPFAM:SSF50998
GO:GO:0008022 GO:GO:0005874 SUPFAM:SSF50952 HOGENOM:HOG000294061
HOVERGEN:HBG051470 InterPro:IPR005108 Pfam:PF03451 CTD:24139
EMBL:AF335571 EMBL:BC062038 IPI:IPI00421523 IPI:IPI00844824
PIR:JC7808 RefSeq:NP_620276.1 UniGene:Rn.76362
ProteinModelPortal:Q6P6T4 STRING:Q6P6T4 PRIDE:Q6P6T4 GeneID:192360
KEGG:rno:192360 InParanoid:Q6P6T4 NextBio:623047
ArrayExpress:Q6P6T4 Genevestigator:Q6P6T4 Uniprot:Q6P6T4
Length = 649
Score = 101 (40.6 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 36/132 (27%), Positives = 61/132 (46%)
Query: 261 EGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQW 320
+GH + GL++H ++ +++ D V LW+ + ++PV S D +
Sbjct: 374 QGHVEELWGLATHPSRAQ------FVSCGQDKLVHLWSSETHQPVWS-RSIEDPARSAGF 426
Query: 321 SPINPALFATVEVAGRVDLWNLNLDTEVPATSAI-VEGAPALSRVTWTPNGTQLCVGDEK 379
P L A V GR W L LDT+ AI +G +S V+++P+G L VG
Sbjct: 427 HPSGSVL-AVGTVTGR---WLL-LDTDTRDLVAIHTDGNEQISVVSFSPDGAYLAVGSHD 481
Query: 380 GAITMFDVGEVG 391
+ ++ V + G
Sbjct: 482 NLVYVYTVDQGG 493
Score = 62 (26.9 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 39/148 (26%), Positives = 59/148 (39%)
Query: 125 CFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVH-RTPLSVMAHTHPVFCMSVIGTQNAHN 183
C A +P ++ T GQ+ T+ K P H R SV T V + V
Sbjct: 110 CLA-VHPDMVTIAT--GQVA-GTTKEGKPLPPHVRVWDSVSLSTLHVLGLGVFDRAVCCV 165
Query: 184 LISISNDGRL-CSWSLE---MLSSPQETRDLQYNNKQTKNLAVLSLAFPQNDVNNFVVGC 239
S SN G L C+ +LS ++ + + + N AVL F D N ++ C
Sbjct: 166 AFSKSNGGNLLCAVDESNDHVLSVWDWAKESKVVDSKCSNEAVLVATFHPTDPN-LLITC 224
Query: 240 EDGNVYS-ACRHGNKAGNVECYEGHEGP 266
++Y + GN + +E HE P
Sbjct: 225 GKSHIYFWSLEGGNLSKRQGLFEKHEKP 252
>UNIPROTKB|Q6P6T4 [details] [associations]
symbol:Eml2 "Echinoderm microtubule-associated protein-like
2" species:10116 "Rattus norvegicus" [GO:0003824 "catalytic
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011041 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:621066 GO:GO:0005737
GO:GO:0003824 Gene3D:2.130.10.10 PROSITE:PS00678 eggNOG:COG2319
GO:GO:0005102 GO:GO:0008152 InterPro:IPR011047 SUPFAM:SSF50998
GO:GO:0008022 GO:GO:0005874 SUPFAM:SSF50952 HOGENOM:HOG000294061
HOVERGEN:HBG051470 InterPro:IPR005108 Pfam:PF03451 CTD:24139
EMBL:AF335571 EMBL:BC062038 IPI:IPI00421523 IPI:IPI00844824
PIR:JC7808 RefSeq:NP_620276.1 UniGene:Rn.76362
ProteinModelPortal:Q6P6T4 STRING:Q6P6T4 PRIDE:Q6P6T4 GeneID:192360
KEGG:rno:192360 InParanoid:Q6P6T4 NextBio:623047
ArrayExpress:Q6P6T4 Genevestigator:Q6P6T4 Uniprot:Q6P6T4
Length = 649
Score = 101 (40.6 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 36/132 (27%), Positives = 61/132 (46%)
Query: 261 EGHEGPVVGLSSHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQW 320
+GH + GL++H ++ +++ D V LW+ + ++PV S D +
Sbjct: 374 QGHVEELWGLATHPSRAQ------FVSCGQDKLVHLWSSETHQPVWS-RSIEDPARSAGF 426
Query: 321 SPINPALFATVEVAGRVDLWNLNLDTEVPATSAI-VEGAPALSRVTWTPNGTQLCVGDEK 379
P L A V GR W L LDT+ AI +G +S V+++P+G L VG
Sbjct: 427 HPSGSVL-AVGTVTGR---WLL-LDTDTRDLVAIHTDGNEQISVVSFSPDGAYLAVGSHD 481
Query: 380 GAITMFDVGEVG 391
+ ++ V + G
Sbjct: 482 NLVYVYTVDQGG 493
Score = 62 (26.9 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 39/148 (26%), Positives = 59/148 (39%)
Query: 125 CFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVH-RTPLSVMAHTHPVFCMSVIGTQNAHN 183
C A +P ++ T GQ+ T+ K P H R SV T V + V
Sbjct: 110 CLA-VHPDMVTIAT--GQVA-GTTKEGKPLPPHVRVWDSVSLSTLHVLGLGVFDRAVCCV 165
Query: 184 LISISNDGRL-CSWSLE---MLSSPQETRDLQYNNKQTKNLAVLSLAFPQNDVNNFVVGC 239
S SN G L C+ +LS ++ + + + N AVL F D N ++ C
Sbjct: 166 AFSKSNGGNLLCAVDESNDHVLSVWDWAKESKVVDSKCSNEAVLVATFHPTDPN-LLITC 224
Query: 240 EDGNVYS-ACRHGNKAGNVECYEGHEGP 266
++Y + GN + +E HE P
Sbjct: 225 GKSHIYFWSLEGGNLSKRQGLFEKHEKP 252
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 94 (38.1 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 35/162 (21%), Positives = 66/162 (40%)
Query: 227 FPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHI---DFSH 283
FP + V ++ +++C G C G + PV H + + D S
Sbjct: 314 FPFHSAPALDVDWQNNTTFASC--GTDMCIHVCRLGCDLPVKTFQGHTNEVNAIKWDPSG 371
Query: 284 LYLTS-SYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPA--------LFATVEVA 334
+ L S S D ++K+W++K++ VH + ++WSP PA + A+
Sbjct: 372 MLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFD 431
Query: 335 GRVDLWNLNLDTEVPATSAIVEGAPALSRVTWTPNGTQLCVG 376
V LW++ T + + + + ++P+G L G
Sbjct: 432 STVRLWDVEQGV---CTHTLTKHQEPVYSIAFSPDGKYLASG 470
Score = 67 (28.6 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 28/119 (23%), Positives = 45/119 (37%)
Query: 48 STKLSFCRQFFDEKWS---KNRNVTYMDWSTQHPELLLASYHRNKEAPNEPDGVCLIWNX 104
ST+L R E W N++VT +DW++ L + SY DG IW
Sbjct: 216 STQLVL-RHCIREGWHDVPSNKDVTSLDWNSDGTLLAMGSY----------DGFARIWTE 264
Query: 105 XXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRV---QKKTPVHRTP 160
+ P+ + + K Y++ G I+ WD +++ P H P
Sbjct: 265 NGNLASTLGQH--KGPIFALKWNKKGNYILSAGVDKTTII-WDAHTGEAKQQFPFHSAP 320
>MGI|MGI:1924093 [details] [associations]
symbol:Dtl "denticleless homolog (Drosophila)" species:10090
"Mus musculus" [GO:0000209 "protein polyubiquitination"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006513 "protein
monoubiquitination" evidence=ISO] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0009411 "response to UV"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0019985
"translesion synthesis" evidence=ISO] [GO:0031464 "Cul4A-RING
ubiquitin ligase complex" evidence=ISO] [GO:0031465 "Cul4B-RING
ubiquitin ligase complex" evidence=ISO] [GO:0031572 "G2 DNA damage
checkpoint" evidence=ISO] [GO:0051726 "regulation of cell cycle"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 MGI:MGI:1924093 GO:GO:0005634
GO:GO:0005737 GO:GO:0005813 GO:GO:0009411 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
GO:GO:0031965 eggNOG:COG2319 GO:GO:0006511 GO:GO:0004842
GO:GO:0000209 GO:GO:0031572 GO:GO:0006513 GO:GO:0031464
GO:GO:0031465 GO:GO:0019985 HOVERGEN:HBG057737 KO:K11790 CTD:51514
GeneTree:ENSGT00530000064210 OMA:ICTYFHR OrthoDB:EOG4N5VWH
EMBL:AB095735 EMBL:AB095736 EMBL:AK012919 EMBL:AK054412
EMBL:AK133177 EMBL:AK161401 EMBL:AK166351 EMBL:BC060208
IPI:IPI00226049 IPI:IPI00336310 IPI:IPI00828553 RefSeq:NP_084042.1
UniGene:Mm.189102 ProteinModelPortal:Q3TLR7 SMR:Q3TLR7
IntAct:Q3TLR7 STRING:Q3TLR7 PhosphoSite:Q3TLR7 PRIDE:Q3TLR7
Ensembl:ENSMUST00000027933 GeneID:76843 KEGG:mmu:76843
UCSC:uc007eck.1 UCSC:uc007ecn.1 NextBio:345915 Bgee:Q3TLR7
CleanEx:MM_DTL Genevestigator:Q3TLR7 Uniprot:Q3TLR7
Length = 729
Score = 95 (38.5 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 41/183 (22%), Positives = 67/183 (36%)
Query: 173 MSVIGTQNAHNLISISN-DGRLCSWSLEM-----LSSPQETRDLQYNNKQTKNLAVLSLA 226
++V+ Q+ + L+S DG + W L P ++ Y T+ L SL
Sbjct: 219 VTVVLFQDENTLVSAGAVDGIIKVWDLRKNYTAYRQEPIASKSFLYPGTSTRKLGYSSLV 278
Query: 227 FPQNDVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGHIDFSHLYL 286
F C D N+Y G K V + GH+ + S + D L +
Sbjct: 279 LDSTGSTLFA-NCTDDNIYMFNMTGLKTSPVAVFNGHQNSTFYVKSSLSP---DDQFL-I 333
Query: 287 TSSYDWSVKLWNIKE--NKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNL 344
+ S D + +W + + P ++ V V W P + AT + +W LN
Sbjct: 334 SGSSDEAAYIWKVSMPWHPPTVLLGHSQE-VTSVCWCPSDFTKIATCSDDNTLKIWRLNR 392
Query: 345 DTE 347
E
Sbjct: 393 GLE 395
Score = 69 (29.3 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 118 QSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQKKTPVHR 158
Q + S F KF + G G I++WDTR KK +R
Sbjct: 140 QCSLKSVAFPKFQKAVFSTGGRDGNIMIWDTRCNKKDGFYR 180
>FB|FBgn0029903 [details] [associations]
symbol:pod1 "pod1" species:7227 "Drosophila melanogaster"
[GO:0003779 "actin binding" evidence=ISS] [GO:0005884 "actin
filament" evidence=IDA] [GO:0051015 "actin filament binding"
evidence=IBA;IDA] [GO:0007411 "axon guidance" evidence=IMP]
[GO:0031532 "actin cytoskeleton reorganization" evidence=IDA]
[GO:0030426 "growth cone" evidence=IDA] [GO:0005881 "cytoplasmic
microtubule" evidence=IDA] [GO:0008017 "microtubule binding"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0031594
"neuromuscular junction" evidence=IDA] [GO:0097113
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate receptor
clustering" evidence=IMP] [GO:0030036 "actin cytoskeleton
organization" evidence=IBA] [GO:0015629 "actin cytoskeleton"
evidence=IBA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007411 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 EMBL:AE014298
GO:GO:0031594 GO:GO:0051015 GO:GO:0030674 GO:GO:0030426
GO:GO:0031532 GO:GO:0008017 GeneTree:ENSGT00550000074317
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 GO:GO:0097113
RefSeq:NP_001096897.1 UniGene:Dm.6234 ProteinModelPortal:A8JV09
SMR:A8JV09 STRING:A8JV09 EnsemblMetazoa:FBtr0112956 GeneID:31620
KEGG:dme:Dmel_CG4532 UCSC:CG4532-RF CTD:31620 FlyBase:FBgn0029903
OrthoDB:EOG4JH9WJ PhylomeDB:A8JV09 ChiTaRS:TCF21 GenomeRNAi:31620
NextBio:774525 Bgee:A8JV09 Uniprot:A8JV09
Length = 1255
Score = 121 (47.7 bits), Expect = 0.00081, P = 0.00081
Identities = 45/155 (29%), Positives = 69/155 (44%)
Query: 231 DVNNFVVGCEDGNVYSACRHGNKAGNVECYEGHEGPVVGLSSHRAQGH-IDFSHL----Y 285
D V C+DG V H +AG + E P L++H + + I F L
Sbjct: 884 DAQRLAVACDDGIV--KIWH-IEAGGLS--EPTNTPAGELTAHLDKIYFIRFHPLAADVL 938
Query: 286 LTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQWSPINPALFATVEVAGRVDLWNLNLD 345
LT+SYD ++KLW+++ S + D + D WSP L ATV G++ ++N
Sbjct: 939 LTASYDMTIKLWDLRTMTEKCSLSGHTDQIFDFAWSPCG-RLGATVCKDGKIRVYNPR-K 996
Query: 346 TEVPATSAIVEGAPALSRVTWTPNGTQL-CVGDEK 379
+E P +R+TW G + C G +K
Sbjct: 997 SETPIREGNGPVGTRGARITWALEGHYIVCTGFDK 1031
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 81 (33.6 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 262 GHEGPVVGLS-SHRAQGHIDFSHLYLTSSYDWSVKLWNIKENKPVHSFNEFRDYVMDVQW 320
GH PV+ + SH Q + + S D SV +++I +H+ + YV +
Sbjct: 237 GHCAPVLACAFSHDGQ-------MLASGSVDKSVIIYDIGTQSVLHTLTQHTRYVTTCAF 289
Query: 321 SPINPALFATVEVAGRVDLWNLNLDTEVPATS 352
+P N L AT + V++W +L+T A S
Sbjct: 290 AP-NTLLLATGSMDKTVNIWQFDLETPCQAGS 320
Score = 79 (32.9 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 17/57 (29%), Positives = 24/57 (42%)
Query: 96 DGVCLIWNXXXXXXXXXXXXXCQSPVLSCCFAKFNPYLILGGTYSGQIVLWDTRVQK 152
DG ++W+ SPV CCF+ + YL G G +VLW+ K
Sbjct: 75 DGTTVLWSAHSGHTLTVLEQPGGSPVRVCCFSPDSTYLASGAA-DGSVVLWNAHSYK 130
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.428 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 401 388 0.00093 117 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 145
No. of states in DFA: 628 (67 KB)
Total size of DFA: 316 KB (2159 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.46u 0.09s 33.55t Elapsed: 00:00:07
Total cpu time: 33.50u 0.09s 33.59t Elapsed: 00:00:07
Start: Thu Aug 15 15:08:20 2013 End: Thu Aug 15 15:08:27 2013
WARNINGS ISSUED: 1