Query psy1735
Match_columns 335
No_of_seqs 122 out of 225
Neff 5.9
Searched_HMMs 29240
Date Fri Aug 16 20:03:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1735.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1735hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1rrp_B Nuclear pore complex pr 99.2 3.1E-11 1.1E-15 102.5 10.1 98 13-110 26-133 (134)
2 1xke_A RAN-binding protein 2; 98.7 1.5E-07 5.2E-12 79.3 10.8 98 14-111 13-120 (130)
3 2ec1_A Nucleoporin 50 kDa; ran 98.6 2.7E-07 9.3E-12 77.3 11.2 95 14-110 18-124 (125)
4 3n7c_A ABR034WP; nuclear pore 98.6 1.7E-07 5.8E-12 79.2 9.8 98 14-111 16-121 (130)
5 1k5d_B RAN-specific GTPase-act 98.5 8.3E-07 2.8E-11 80.1 12.7 98 14-111 51-161 (201)
6 4hat_B RAN-specific GTPase-act 98.5 6.5E-07 2.2E-11 76.5 10.5 98 13-110 27-135 (140)
7 2y8g_A Ranbp3-B, RAN-binding p 98.5 9.1E-07 3.1E-11 75.3 10.2 91 14-105 20-120 (138)
8 2crf_A RAN binding protein 3; 98.4 8.5E-07 2.9E-11 76.6 9.8 91 14-105 32-132 (150)
9 3m1i_B RAN-specific GTPase-act 98.4 1.4E-06 4.8E-11 78.0 11.1 98 13-110 78-186 (191)
10 1qc6_A EVH1 domain from ENA/VA 97.8 0.00018 6.3E-09 60.3 10.6 96 13-110 8-110 (130)
11 1evh_A WH1 domain, protein (ME 97.5 0.00086 2.9E-08 54.9 10.4 93 13-107 8-106 (112)
12 1ddw_A GLGF-domain protein hom 97.5 0.0014 4.8E-08 54.3 11.6 96 13-110 8-108 (120)
13 1egx_A VAsp, vasodilator-stimu 97.4 0.0011 3.8E-08 54.5 9.8 94 13-108 8-109 (115)
14 1i2h_A PSD-ZIP45(homer-1C/VESL 97.1 0.0043 1.5E-07 54.3 11.2 97 12-110 12-113 (168)
15 2jp2_A Spred-2, sprouty-relate 97.0 0.0048 1.6E-07 51.6 9.9 93 14-107 18-119 (126)
16 1xod_A Spred1; sprouty, EVH1, 96.8 0.0045 1.6E-07 51.1 8.4 94 14-108 9-111 (118)
17 2ifs_A N-WAsp, wiskott-aldrich 96.1 0.053 1.8E-06 47.4 11.0 94 16-110 65-158 (169)
18 1mke_A WIP - N-WAsp, fusion pr 96.0 0.069 2.4E-06 45.9 11.2 94 16-110 48-141 (152)
19 3syx_A Sprouty-related, EVH1 d 92.6 0.32 1.1E-05 40.7 7.1 99 9-108 11-118 (130)
20 2lyd_A Decapping protein 1; DC 91.5 1.7 5.9E-05 36.3 10.5 95 14-110 36-132 (134)
21 2qkl_A DCP1 protein, SPBC3B9.2 89.4 3.4 0.00012 34.2 10.4 91 13-108 30-124 (127)
22 2crp_A RGS5, regulator of G-pr 48.4 13 0.00044 30.5 3.4 59 139-198 11-69 (150)
23 2dlr_A RGS10, regulator of G-p 23.1 81 0.0028 25.5 4.2 49 149-198 11-59 (149)
24 3c7l_A Regulator of G-protein 22.6 1.6E+02 0.0056 23.3 5.9 48 150-198 15-62 (137)
25 2oqb_A Histone-arginine methyl 21.9 3.2E+02 0.011 22.1 11.3 94 16-111 13-108 (117)
26 2dlv_A RGS18, regulator of G-p 21.6 60 0.002 25.9 3.0 41 157-198 19-59 (140)
27 1zv4_X RGS17, regulator of G-p 21.3 63 0.0021 26.7 3.2 41 156-197 36-76 (158)
No 1
>1rrp_B Nuclear pore complex protein NUP358; complex (small GTPase/nuclear protein), small GTPase, nuclear transport; HET: GNP; 2.96A {Homo sapiens} SCOP: b.55.1.3
Probab=99.24 E-value=3.1e-11 Score=102.46 Aligned_cols=98 Identities=21% Similarity=0.348 Sum_probs=85.6
Q ss_pred CCcEEEEEeCC-CCCceeeceEEEEEEEecCCCceEEEEEecCCCCeeEEeeecCCcccceec--cEEEEEecC-----C
Q psy1735 13 RRRVKLYALNA-DRQWDDKGTGHVSSIYVEKHKGMSLLVRAEADGTLLLESKIQTDTAYQKQQ--DTLIVWSER-----D 84 (335)
Q Consensus 13 ~~RVKvY~L~~-~~~W~D~GTG~~s~~~~e~~~~~~l~V~sE~~~~~LL~s~I~~~~~YqrQq--eTlIvW~e~-----~ 84 (335)
..|+|||.++. +++|.++|+|.+........+...|++|.+..+.++|+++|.++-.|+.+. +..++|+-. +
T Consensus 26 ~~raKL~~~~~~~~~WkerG~G~lkil~~k~~~k~RlvmR~d~~~kv~lN~~i~~~m~~~~~~~s~~~~~~~~~d~~d~~ 105 (134)
T 1rrp_B 26 CNRAKLFRFDVESKEWKERGIGNVKILRHKTSGKIRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWHALDYADEL 105 (134)
T ss_dssp EEEEEEEEECSSSSCEEEEEEEEEEEEEESSSCCCEEEEECTTTCCEEECCBCCSSCCCBCSTTCTTEEEEEEEECTTSS
T ss_pred EEEEEEEEEcccCCCcccCcEEEEEEEEECCCCeEEEEEEEcCCCcEEEEeEecCCceEeecCCCCeEEEEEcccccCCC
Confidence 37999999973 679999999999987776678899999999999999999999999999874 689999632 2
Q ss_pred --CCceeeeccCccchHHHHHHHHHHhc
Q psy1735 85 --NYDLALSFQEKAGCDEIWEKICQVQG 110 (335)
Q Consensus 85 --~~dlALSFQe~~GC~~iW~~I~~vQ~ 110 (335)
...+||.|..++.|+++++.|.+.|.
T Consensus 106 ~k~~~~~irfk~~e~A~~f~~~~~e~~~ 133 (134)
T 1rrp_B 106 PKPEQLAIRFKTPEEAALFKCKFEEAQS 133 (134)
T ss_dssp CEEEEEEEECSSHHHHHHHHHHHHHTTC
T ss_pred CceEEEEEEECCHHHHHHHHHHHHHHhh
Confidence 35789999999999999999998874
No 2
>1xke_A RAN-binding protein 2; beta barrel, pleckstrin-homology (PH) domain, phosphotyrosine-binding (PTB) domain, protein transport; NMR {Homo sapiens} SCOP: b.55.1.3
Probab=98.66 E-value=1.5e-07 Score=79.30 Aligned_cols=98 Identities=24% Similarity=0.365 Sum_probs=84.0
Q ss_pred CcEEEEEeCC-CCCceeeceEEEEEEEecCCCceEEEEEecCCCCeeEEeeecCCcccceec--cEEEEEe-----cCC-
Q psy1735 14 RRVKLYALNA-DRQWDDKGTGHVSSIYVEKHKGMSLLVRAEADGTLLLESKIQTDTAYQKQQ--DTLIVWS-----ERD- 84 (335)
Q Consensus 14 ~RVKvY~L~~-~~~W~D~GTG~~s~~~~e~~~~~~l~V~sE~~~~~LL~s~I~~~~~YqrQq--eTlIvW~-----e~~- 84 (335)
.|+|||++.. ++.|.++|+|-+......+.+...|++|.+....++|++.|.++-.|+... +.-++|+ |.+
T Consensus 13 ~raKL~~~~~~~~~WkERG~G~lkil~~k~~~k~RlvmR~d~~~kv~lN~~i~~~m~~~~~~~s~~~~~~~~~d~~d~~~ 92 (130)
T 1xke_A 13 QRVKLFRFDAEVSQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDA 92 (130)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEEEEEEETTSSCEEEEEEETTTTEEEEEEECCTTSCEEECTTCSSCEEEEEEECSSSCS
T ss_pred EEEEEEEEcCCCCCcccCcEEEEEEEEcCCCCeEEEEEEEcCCCeEEEecEeCCCcEEeecCCCCeEEEEEecccCCCCC
Confidence 5899999964 479999999999887776677899999999999999999999999998864 5678897 322
Q ss_pred -CCceeeeccCccchHHHHHHHHHHhcC
Q psy1735 85 -NYDLALSFQEKAGCDEIWEKICQVQGK 111 (335)
Q Consensus 85 -~~dlALSFQe~~GC~~iW~~I~~vQ~~ 111 (335)
-.-+||.|-.++-++++.+.|.+.|..
T Consensus 93 ~~~~~~irfks~e~a~~f~~~~ee~k~~ 120 (130)
T 1xke_A 93 KLEQLAAKFKTPELAEEFKQKFEECQRL 120 (130)
T ss_dssp EEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEECCHHHHHHHHHHHHHHHHH
Confidence 245799999999999999999998864
No 3
>2ec1_A Nucleoporin 50 kDa; ranbp domain, nuclear pore-associated protein 60 kDa-like, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.62 E-value=2.7e-07 Score=77.35 Aligned_cols=95 Identities=19% Similarity=0.400 Sum_probs=80.3
Q ss_pred CcEEEEEeCCCCCceeeceEEEEEEEecCCCceEEEEEecCC-CCeeEEeeecCCcccceec-cEEEEEecC----CC--
Q psy1735 14 RRVKLYALNADRQWDDKGTGHVSSIYVEKHKGMSLLVRAEAD-GTLLLESKIQTDTAYQKQQ-DTLIVWSER----DN-- 85 (335)
Q Consensus 14 ~RVKvY~L~~~~~W~D~GTG~~s~~~~e~~~~~~l~V~sE~~-~~~LL~s~I~~~~~YqrQq-eTlIvW~e~----~~-- 85 (335)
.|+|+|+.. +++|.++|+|.+...-.+ .+...|++|.+.. +.++|++.|.++-.|+..+ +++.+|+=+ ++
T Consensus 18 ~raKLf~~~-~~~WkERGvG~lki~~~k-~~k~RllmR~d~~~~kv~lN~~i~~~m~~~~~g~~~~~~~~~~~~~~d~~~ 95 (125)
T 2ec1_A 18 KKCKLFYKK-DNEFKEKGIGTLHLKPTA-NQKTQLLVRADTNLGNILLNVLIPPNMPCTRTGKNNVLIVCVPNPPIDEKN 95 (125)
T ss_dssp EEEEEEEEC-SSSEEEEEEEEEEEEECS-SSSEEEEEEESSSSCCBSCCEECCSSCCEECCTTTEEEEEECCSSCSCSSS
T ss_pred EeeEEEEec-CCCcccccEEEEEeeecC-CCcEEEEEEecCCCCEEEEeeEEcCCCeEEecCCCcEEEEEccCCcccCCC
Confidence 699999995 579999999999875444 5679999999987 8999999999999999974 788888522 22
Q ss_pred ----CceeeeccCccchHHHHHHHHHHhc
Q psy1735 86 ----YDLALSFQEKAGCDEIWEKICQVQG 110 (335)
Q Consensus 86 ----~dlALSFQe~~GC~~iW~~I~~vQ~ 110 (335)
.-+||.|-.++-++++.+.|.+.|.
T Consensus 96 ~~~~~~~~lrfk~~e~a~~f~~~~~e~k~ 124 (125)
T 2ec1_A 96 ATMPVTMLIRVKTSEDADELHKILLEKKD 124 (125)
T ss_dssp SSSCEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEEECCHHHHHHHHHHHHHhhc
Confidence 2489999999999999999988764
No 4
>3n7c_A ABR034WP; nuclear pore complex, NUP2, RAN-binding domain, nucleoporin, structural genomics, PSI-2, protein structure initiative; 2.26A {Ashbya gossypii} PDB: 3oan_A
Probab=98.61 E-value=1.7e-07 Score=79.16 Aligned_cols=98 Identities=18% Similarity=0.373 Sum_probs=80.5
Q ss_pred CcEEEEEeCC-CCCceeeceEEEEEEEec-CCCceEEEEEecCCCCeeEEeeecCCcccceec---cEEEEEec---CCC
Q psy1735 14 RRVKLYALNA-DRQWDDKGTGHVSSIYVE-KHKGMSLLVRAEADGTLLLESKIQTDTAYQKQQ---DTLIVWSE---RDN 85 (335)
Q Consensus 14 ~RVKvY~L~~-~~~W~D~GTG~~s~~~~e-~~~~~~l~V~sE~~~~~LL~s~I~~~~~YqrQq---eTlIvW~e---~~~ 85 (335)
.|+|||.+.. ++.|.++|+|-+...... +.+...|++|.+..+.++|++.|.++-.|++.. .+.+.|.. +.-
T Consensus 16 ~raKL~~f~~~~~~WkerG~G~lkil~~k~~~~k~RllmR~d~~~kv~lN~~i~~~m~~~~~~~~~~~~v~~~~~~dgk~ 95 (130)
T 3n7c_A 16 EKAKLLIFDSDTKGYTSRGVGELKLLRKKDDKGKVRVLCRSEGMGHVLLNTSVVKSFKYQPIDADNENLIKWPIITDGKL 95 (130)
T ss_dssp EEEEEEEECC---CEEEEEEEEEEEEEETTEEEEEEEEEEC-CCCCEEEEEECCTTBCCEESCTTCTTEEEEEEEETTEE
T ss_pred EEEEEEEEeCCCCCchhcceEEEEEEEecCCCCEEEEEEEecCCceEEeeccccCCcEEeEcCCCCccEEEEEecCCCce
Confidence 6899999975 458999999999876544 356799999999999999999999999999875 57888863 333
Q ss_pred CceeeeccCccchHHHHHHHHHHhcC
Q psy1735 86 YDLALSFQEKAGCDEIWEKICQVQGK 111 (335)
Q Consensus 86 ~dlALSFQe~~GC~~iW~~I~~vQ~~ 111 (335)
.-+||.|-.++-++++.+.|.+.|..
T Consensus 96 ~~~~lrfks~e~A~~f~~~iee~~~~ 121 (130)
T 3n7c_A 96 ETFIIKVKQKADGRRLVGAVADAQQA 121 (130)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCHHHHHHHHHHHHHHHhh
Confidence 56899999999999999999988763
No 5
>1k5d_B RAN-specific GTPase-activating protein; ranbp1, rangap, GAP, signal transduction, nuclear transport, GTP hydrolysis, ground state; HET: GNP; 2.70A {Homo sapiens} SCOP: b.55.1.3 PDB: 1k5g_B*
Probab=98.53 E-value=8.3e-07 Score=80.12 Aligned_cols=98 Identities=19% Similarity=0.328 Sum_probs=82.8
Q ss_pred CcEEEEEe--C-CCCCceeeceEEEEEEEecCCCceEEEEEecCCCCeeEEeeecCCcccceec--cEEEEEec---CC-
Q psy1735 14 RRVKLYAL--N-ADRQWDDKGTGHVSSIYVEKHKGMSLLVRAEADGTLLLESKIQTDTAYQKQQ--DTLIVWSE---RD- 84 (335)
Q Consensus 14 ~RVKvY~L--~-~~~~W~D~GTG~~s~~~~e~~~~~~l~V~sE~~~~~LL~s~I~~~~~YqrQq--eTlIvW~e---~~- 84 (335)
.|+|||++ + +++.|.++|+|-+........+..+|++|.+..+.++|++.|.++-.|++.. +.-++|+- ..
T Consensus 51 ~RaKLf~f~~d~~~~~WKERGvG~lkIlk~k~t~k~RlvMR~d~~~kV~LN~~I~~~m~~~~~~~s~ks~v~~~~~d~ad 130 (201)
T 1k5d_B 51 MRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFAD 130 (201)
T ss_dssp EEEEEEEECCTTSSCCEEEEEEEEEEEEECSSSCCEEEEEEETTTCCEEEEEECCSSCCCCBCSSCSSEEEEEEEEECTT
T ss_pred EeeeEEEecccccCCCccccceEEEEEEEcCCCCcEEEEEEECCcceEEEeeEecCCceeeecCCCCceEEEEeccccCC
Confidence 69999999 4 2468999999999877665667899999999999999999999999999874 56789942 21
Q ss_pred ----CCceeeeccCccchHHHHHHHHHHhcC
Q psy1735 85 ----NYDLALSFQEKAGCDEIWEKICQVQGK 111 (335)
Q Consensus 85 ----~~dlALSFQe~~GC~~iW~~I~~vQ~~ 111 (335)
-.-+||.|-.++-++.+...|.+.|..
T Consensus 131 ~~~k~e~~~iRfks~e~A~~f~~~~ee~k~~ 161 (201)
T 1k5d_B 131 ECPKPELLAIRFLNAENAQKFKTKFEECRKE 161 (201)
T ss_dssp SSCEEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEEECCHHHHHHHHHHHHHHHHH
Confidence 134899999999999999999988864
No 6
>4hat_B RAN-specific GTPase-activating protein 1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_B* 4hav_B* 4haw_B* 4hax_B* 4hay_B* 4haz_B* 4hb0_B* 4hb2_B* 4hb3_B* 4hb4_B* 4gmx_B* 4gpt_B*
Probab=98.50 E-value=6.5e-07 Score=76.50 Aligned_cols=98 Identities=19% Similarity=0.421 Sum_probs=82.5
Q ss_pred CCcEEEEEeCC-CCCceeeceEEEEEEEecCCCceEEEEEecCCCCeeEEeeecCCcccceec--cEEEEEe---c-CCC
Q psy1735 13 RRRVKLYALNA-DRQWDDKGTGHVSSIYVEKHKGMSLLVRAEADGTLLLESKIQTDTAYQKQQ--DTLIVWS---E-RDN 85 (335)
Q Consensus 13 ~~RVKvY~L~~-~~~W~D~GTG~~s~~~~e~~~~~~l~V~sE~~~~~LL~s~I~~~~~YqrQq--eTlIvW~---e-~~~ 85 (335)
..|+|+|++.. ++.|.++|+|-+......+.+...|++|.+..+.++|++.|.++-.|+... +.-++|+ | +++
T Consensus 27 ~~raKLf~f~~~~~~WkerG~G~lkilk~k~~~k~RllmR~d~~~kv~lN~~i~~~m~~~~~~~s~k~~v~~~~~D~sdg 106 (140)
T 4hat_B 27 KVRAKLFRFDKDAKEWKERGTGDCKFLKNKKTNKVRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEG 106 (140)
T ss_dssp EEEEEEEEEETTTTEEEEEEEEEEEEEEETTTCCEEEEEECTTTCCEEEEEECCTTCCCBCCTTCSSEEEEEEEEECTTS
T ss_pred EEeEEEEEEcCCCCCcccccEEEEEEEEcCCCCeEEEEEEecCcceEEEEeEecCCeEEeEcCCCCceEEEEccccCCCC
Confidence 36899999964 568999999999887666667799999999999999999999999999975 3467885 2 222
Q ss_pred ----CceeeeccCccchHHHHHHHHHHhc
Q psy1735 86 ----YDLALSFQEKAGCDEIWEKICQVQG 110 (335)
Q Consensus 86 ----~dlALSFQe~~GC~~iW~~I~~vQ~ 110 (335)
.-+|+.|-.++-++++.+.+.+.|.
T Consensus 107 ~~~~~~~~iRfk~~e~A~~f~~~~ee~~~ 135 (140)
T 4hat_B 107 EAEAFTFAIRFGSKENADKFKEEFEKAQE 135 (140)
T ss_dssp SCEEEEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEEECCHHHHHHHHHHHHHHHH
Confidence 3589999999999999999988875
No 7
>2y8g_A Ranbp3-B, RAN-binding protein 3; protein transport, CRM1-mediated nuclear export; 1.61A {Homo sapiens} PDB: 2y8f_A
Probab=98.46 E-value=9.1e-07 Score=75.35 Aligned_cols=91 Identities=15% Similarity=0.266 Sum_probs=74.5
Q ss_pred CcEEEEEeCC-CCCceeeceEEEEEEEecC----CCceEEEEEecCCCCeeEEeeecCCcccceeccEEEEEec-----C
Q psy1735 14 RRVKLYALNA-DRQWDDKGTGHVSSIYVEK----HKGMSLLVRAEADGTLLLESKIQTDTAYQKQQDTLIVWSE-----R 83 (335)
Q Consensus 14 ~RVKvY~L~~-~~~W~D~GTG~~s~~~~e~----~~~~~l~V~sE~~~~~LL~s~I~~~~~YqrQqeTlIvW~e-----~ 83 (335)
.|+|+|.+.. ++.|.++|+|.+....... .....|++|.+....++|++.|.++-.|++..+.-++|+- .
T Consensus 20 ~raKL~~f~~~~~~WkERG~G~lkil~~k~~~~~t~k~RlvmR~d~~~kv~lN~~i~~~m~~~~~~~k~~~~~~~d~~d~ 99 (138)
T 2y8g_A 20 MQCKLFVFDKTSQSWVAVGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQ 99 (138)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEEEEEEEECTTTCCEEEEEEEEETTTCCEEEEEECCTTCCEEEEETTEEEEECCC--CC
T ss_pred EEeEEEEEecCCCCchhceEEEEEEEEeccCCCCCccEEEEEEEcCcceEEEeeEecCCceeecCCCCEEEEEEecCCCC
Confidence 6899999975 4689999999987776531 3568999999999999999999999999998899999982 2
Q ss_pred CCCceeeeccCccchHHHHHHH
Q psy1735 84 DNYDLALSFQEKAGCDEIWEKI 105 (335)
Q Consensus 84 ~~~dlALSFQe~~GC~~iW~~I 105 (335)
.-.-++|.|-.++-+ ..+..+
T Consensus 100 ~~~~~lirfk~~e~a-~lf~~~ 120 (138)
T 2y8g_A 100 GVKVFLISASSKDTG-QLYAAL 120 (138)
T ss_dssp CCCEEEEECCHHHHH-HHHHHH
T ss_pred ceEEEEEEECCHHHH-HHHHHH
Confidence 235789999999877 455444
No 8
>2crf_A RAN binding protein 3; RAN_BP1 domain, ranbp3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.3
Probab=98.44 E-value=8.5e-07 Score=76.56 Aligned_cols=91 Identities=15% Similarity=0.299 Sum_probs=75.0
Q ss_pred CcEEEEEeCC-CCCceeeceEEEEEEEec----CCCceEEEEEecCCCCeeEEeeecCCcccceeccEEEEEe--cCC--
Q psy1735 14 RRVKLYALNA-DRQWDDKGTGHVSSIYVE----KHKGMSLLVRAEADGTLLLESKIQTDTAYQKQQDTLIVWS--ERD-- 84 (335)
Q Consensus 14 ~RVKvY~L~~-~~~W~D~GTG~~s~~~~e----~~~~~~l~V~sE~~~~~LL~s~I~~~~~YqrQqeTlIvW~--e~~-- 84 (335)
.|+|||.+.. ++.|.++|+|.+...... ......|++|.+....++|++.|.++-.|++..++-++|+ |++
T Consensus 32 ~raKL~~fd~~~~~WkERG~G~lkil~~k~~~~~t~k~RlvmR~d~~~kv~lN~~i~~~m~~~~~~~k~~~~~~~d~~d~ 111 (150)
T 2crf_A 32 MQCKLFVFDKTSQSWVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIHITAMDTEDQ 111 (150)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEEEEEEEECSSSCSEEEEEEEEESSSCCEEEEEECCTTCCEECCSSSEEEEEEEBSSSC
T ss_pred EEeEEEEEcCCCCCcccceeEEEEEEeccccCCCCccEEEEEEEcCcceEEeeeeccCCceeecCCCCEEEEEeecCCCC
Confidence 6899999964 468999999988776543 2356899999999999999999999999999899999998 432
Q ss_pred -CCceeeeccCccchHHHHHHH
Q psy1735 85 -NYDLALSFQEKAGCDEIWEKI 105 (335)
Q Consensus 85 -~~dlALSFQe~~GC~~iW~~I 105 (335)
-.-++|.|-.++.++ .+..|
T Consensus 112 ~~~~~lirfk~~e~a~-lf~~~ 132 (150)
T 2crf_A 112 GVKVFLISASSKDTGQ-LYAAL 132 (150)
T ss_dssp CEEEEEEECCHHHHHH-HHHHH
T ss_pred ceEEEEEEECCHHHHH-HHHHH
Confidence 245799999999885 55544
No 9
>3m1i_B RAN-specific GTPase-activating protein 1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae}
Probab=98.42 E-value=1.4e-06 Score=77.98 Aligned_cols=98 Identities=20% Similarity=0.411 Sum_probs=82.8
Q ss_pred CCcEEEEEeCC-CCCceeeceEEEEEEEecCCCceEEEEEecCCCCeeEEeeecCCcccceec--cEEEEEec----CCC
Q psy1735 13 RRRVKLYALNA-DRQWDDKGTGHVSSIYVEKHKGMSLLVRAEADGTLLLESKIQTDTAYQKQQ--DTLIVWSE----RDN 85 (335)
Q Consensus 13 ~~RVKvY~L~~-~~~W~D~GTG~~s~~~~e~~~~~~l~V~sE~~~~~LL~s~I~~~~~YqrQq--eTlIvW~e----~~~ 85 (335)
..|+|||++.. ++.|.++|+|.+........+..+|++|.+..+.++|++.|.++-.|++.. +.-++|.- +++
T Consensus 78 ~~RaKLf~f~~~~~~WKERGvG~lkilk~ket~k~RllMR~d~~~kV~LN~~I~~~m~~~~~~~sdks~v~~~~~D~sdg 157 (191)
T 3m1i_B 78 KVRAKLFRFDADAKEWKERGTGDCKFLKNKKTNKVRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEG 157 (191)
T ss_dssp EEEEEEEEEETTTTEEEEEEEEEEEEEEETTTCCEEEEEECTTTCCEEEEEECCTTCCCBCCTTCSSEEEEEEEEECTTS
T ss_pred EEeeEEEEEecCCCCccceeEEEEEEEEcCCCCeEEEEEEecCcceEEEeeecCCCcEEeECCCCCceEEEEecCcCCCC
Confidence 36999999964 468999999999887666567799999999999999999999999999984 45788862 133
Q ss_pred ----CceeeeccCccchHHHHHHHHHHhc
Q psy1735 86 ----YDLALSFQEKAGCDEIWEKICQVQG 110 (335)
Q Consensus 86 ----~dlALSFQe~~GC~~iW~~I~~vQ~ 110 (335)
.-+||.|-.++-++.+...|.+.|.
T Consensus 158 e~k~e~~aIRFk~~E~A~eF~~~~eeaq~ 186 (191)
T 3m1i_B 158 EAEAFTFAIRFGSKENADKFKEEFEKAQE 186 (191)
T ss_dssp SCEEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEEECCHHHHHHHHHHHHHHHH
Confidence 3589999999999999999988875
No 10
>1qc6_A EVH1 domain from ENA/VAsp-like protein; AN incomplete seven stranded anti-parallel beta barrel closed by AN alpha helix, EVH1 domain; 2.60A {Mus musculus} SCOP: b.55.1.4
Probab=97.77 E-value=0.00018 Score=60.32 Aligned_cols=96 Identities=13% Similarity=0.223 Sum_probs=73.1
Q ss_pred CCcEEEEEeCC-CCCceeeceE-----EEEEEEecCCCceEEEEE-ecCCCCeeEEeeecCCcccceeccEEEEEecCCC
Q psy1735 13 RRRVKLYALNA-DRQWDDKGTG-----HVSSIYVEKHKGMSLLVR-AEADGTLLLESKIQTDTAYQKQQDTLIVWSERDN 85 (335)
Q Consensus 13 ~~RVKvY~L~~-~~~W~D~GTG-----~~s~~~~e~~~~~~l~V~-sE~~~~~LL~s~I~~~~~YqrQqeTlIvW~e~~~ 85 (335)
.-|++||..++ .+.|...|+| .|+...... ...+-+|. ...+..+++++.|..+-.|.+.-.+..+|.+. .
T Consensus 8 ~~~A~V~~~d~~~~~W~~~g~G~~~l~~V~i~~~~~-~~~~Riv~~~~~~~~vi~n~~i~~~~~y~~~~~~Fh~w~~~-~ 85 (130)
T 1qc6_A 8 QARASVMVYDDTSKKWVPIKPGQQGFSRINIYHNTA-SSTFRVVGVKLQDQQVVINYSIVKGLKYNQATPTFHQWRDA-R 85 (130)
T ss_dssp EEEEEEEEEETTTTEEEECC-----CEEEEEEEETT-TTEEEEEEECTTTCCEEEEEECCTTCEEEEEETTEEEEECS-S
T ss_pred EEEEEEEEECCCCCceeECCCCceeeeEEEEEecCC-CcEEEEEEEeCCCCeEEEeeEEeCCcEEeccCCeeEEEEcC-C
Confidence 35899999864 4689999999 333333333 33443443 44789999999999999999999999999887 4
Q ss_pred CceeeeccCccchHHHHHHHHHHhc
Q psy1735 86 YDLALSFQEKAGCDEIWEKICQVQG 110 (335)
Q Consensus 86 ~dlALSFQe~~GC~~iW~~I~~vQ~ 110 (335)
.-++|+|++.+-+....+.+.+...
T Consensus 86 ~~~GL~F~se~eA~~F~~~~~~al~ 110 (130)
T 1qc6_A 86 QVYGLNFASKEEATTFSNAMLFALN 110 (130)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCHHHHHHHHHHHHHHHH
Confidence 7889999999999999888876554
No 11
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=97.48 E-value=0.00086 Score=54.90 Aligned_cols=93 Identities=17% Similarity=0.322 Sum_probs=73.5
Q ss_pred CCcEEEEEeCC-CCCceeec--eEE--EEEEEecCCCceEEEE-EecCCCCeeEEeeecCCcccceeccEEEEEecCCCC
Q psy1735 13 RRRVKLYALNA-DRQWDDKG--TGH--VSSIYVEKHKGMSLLV-RAEADGTLLLESKIQTDTAYQKQQDTLIVWSERDNY 86 (335)
Q Consensus 13 ~~RVKvY~L~~-~~~W~D~G--TG~--~s~~~~e~~~~~~l~V-~sE~~~~~LL~s~I~~~~~YqrQqeTlIvW~e~~~~ 86 (335)
.-|+.||..++ .+.|.-.| .|. ++...+. ..+.+.+| ..-.++++++++.|.++-.|.+-..+.-.|.+.. .
T Consensus 8 ~~~A~V~~~d~~~~~W~p~~~~~g~s~V~~~~d~-~~~~yrIv~~~l~~~~vv~~~~l~~~~~y~~~~p~Fh~w~~~~-~ 85 (112)
T 1evh_A 8 QARAAVMVYDDANKKWVPAGGSTGFSRVHIYHHT-GNNTFRVVGRKIQDHQVVINCAIPKGLKYNQATQTFHQWRDAR-Q 85 (112)
T ss_dssp EEEEEEEEEETTTTEEEEGGGCCSCEEEEEEEET-TTTEEEEEEEETTTCCEEEEEEECTTCCCBCCSSSEEEEECSS-C
T ss_pred EEEEEEEEEcCCCCceEECCCCCCceEEEEEEEC-CCCEEEEEEEECCCCcEEEeeEecCCceEEecCccceeEecCC-E
Confidence 35889999865 35999999 675 4444333 34555554 4446889999999999999999999999999885 8
Q ss_pred ceeeeccCccchHHHHHHHHH
Q psy1735 87 DLALSFQEKAGCDEIWEKICQ 107 (335)
Q Consensus 87 dlALSFQe~~GC~~iW~~I~~ 107 (335)
-+.|.|++.+.+....+.+.+
T Consensus 86 ~~GLnF~se~eA~~F~~~v~~ 106 (112)
T 1evh_A 86 VYGLNFGSKEDANVFASAMMH 106 (112)
T ss_dssp EEEEEESSHHHHHHHHHHHHH
T ss_pred EEEEecCCHHHHHHHHHHHHH
Confidence 899999999999998887754
No 12
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=97.46 E-value=0.0014 Score=54.33 Aligned_cols=96 Identities=16% Similarity=0.343 Sum_probs=77.5
Q ss_pred CCcEEEEEeCCC--CCcee--eceEEEEEEEecCCCceEEEEEecCCCCeeEEeeecCCcccceeccEEEEEecCC-CCc
Q psy1735 13 RRRVKLYALNAD--RQWDD--KGTGHVSSIYVEKHKGMSLLVRAEADGTLLLESKIQTDTAYQKQQDTLIVWSERD-NYD 87 (335)
Q Consensus 13 ~~RVKvY~L~~~--~~W~D--~GTG~~s~~~~e~~~~~~l~V~sE~~~~~LL~s~I~~~~~YqrQqeTlIvW~e~~-~~d 87 (335)
.-|++||.-++. +.|.. .|.|.|+..++.. .+.+-+|. -.++++++++.|.++-.|.+.-.+.-.|.+.. +.-
T Consensus 8 ~~rA~V~~~D~~tk~~W~p~g~~~~~V~~~~d~~-~~~yRIv~-~~~~~vv~n~~i~~~l~y~~a~p~FhqW~d~~~~~~ 85 (120)
T 1ddw_A 8 STRAHVFQIDPNTKKNWVPTSKHAVTVSYFYDST-RNVYRIIS-LDGSKAIINSTITPNMTFTKTSQKFGQWADSRANTV 85 (120)
T ss_dssp EEEEEEEEECTTTSCSEEESCSSCEEEEEEEETT-TTEEEEEE-EETTEEEEEEECCTTCCCEECSSSEEEEEETTTTEE
T ss_pred EEEEEEEEEcCCCCCceEeCCCCceEEEEEEcCC-CCEEEEEE-ccCCEEEEeCEecCCcEEeeCCccccEEEcCCCcEE
Confidence 368999999763 49999 6677666555543 44444444 44889999999999999999999999999987 789
Q ss_pred eeeeccCccchHHHHHHHHHHhc
Q psy1735 88 LALSFQEKAGCDEIWEKICQVQG 110 (335)
Q Consensus 88 lALSFQe~~GC~~iW~~I~~vQ~ 110 (335)
++|.||.++-+...-+.+.++..
T Consensus 86 ~GLnF~s~~eA~~F~~~~~~~~~ 108 (120)
T 1ddw_A 86 YGLGFSSEHHLSKFAEKFQEFKE 108 (120)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEeccCCHHHHHHHHHHHHHHHH
Confidence 99999999999998888877654
No 13
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=97.36 E-value=0.0011 Score=54.51 Aligned_cols=94 Identities=14% Similarity=0.248 Sum_probs=73.5
Q ss_pred CCcEEEEEeCC-CCCceeece---EE--EEEEEecCCCceEEE-EEecC-CCCeeEEeeecCCcccceeccEEEEEecCC
Q psy1735 13 RRRVKLYALNA-DRQWDDKGT---GH--VSSIYVEKHKGMSLL-VRAEA-DGTLLLESKIQTDTAYQKQQDTLIVWSERD 84 (335)
Q Consensus 13 ~~RVKvY~L~~-~~~W~D~GT---G~--~s~~~~e~~~~~~l~-V~sE~-~~~~LL~s~I~~~~~YqrQqeTlIvW~e~~ 84 (335)
.-||.||.-++ .+.|.-.|. |. ++...+. ..+.+.+ ...-. ++++++++.|.++-.|.+...+.-.|.+..
T Consensus 8 ~~~A~V~~~d~~~~~W~p~~~g~~gvs~V~~~~d~-~~~~yrI~~~~l~~~~~vv~~~~l~~~l~y~~~~p~FH~w~~~~ 86 (115)
T 1egx_A 8 SSRATVMLYDDGNKRWLPAGTGPQAFSRVQIYHNP-TANSFRVVGRKMQPDQQVVINCAIVRGVKYNQATPNFHQWRDAR 86 (115)
T ss_dssp EEEEECBEECTTTSSCCBSSCSCCCCEEEEEEEET-TTTEEEEEEEESSTTCCEEEEEEECSSCCCCCSSTTEEEEESSS
T ss_pred EEEEEEEEEcCCCCceeECCCCCCCccEEEEEEeC-CCCEEEEEEEEcCCCCEEEEeeEEcCCceEEecCccceEEecCC
Confidence 35889999865 356999998 55 5444443 3444444 33434 889999999999999999999999999885
Q ss_pred CCceeeeccCccchHHHHHHHHHH
Q psy1735 85 NYDLALSFQEKAGCDEIWEKICQV 108 (335)
Q Consensus 85 ~~dlALSFQe~~GC~~iW~~I~~v 108 (335)
.-+.|.||..+-+....+.+.+.
T Consensus 87 -~~~GLnF~se~eA~~F~~~v~~a 109 (115)
T 1egx_A 87 -QVWGLNFGSKEDAAQFAAGMASA 109 (115)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHH
T ss_pred -EEEEEecCCHHHHHHHHHHHHHH
Confidence 88999999999999988877553
No 14
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=97.10 E-value=0.0043 Score=54.31 Aligned_cols=97 Identities=15% Similarity=0.331 Sum_probs=77.8
Q ss_pred CCCcEEEEEeCCC--CCcee--eceEEEEEEEecCCCceEEEEEecCCCCeeEEeeecCCcccceeccEEEEEecCC-CC
Q psy1735 12 TRRRVKLYALNAD--RQWDD--KGTGHVSSIYVEKHKGMSLLVRAEADGTLLLESKIQTDTAYQKQQDTLIVWSERD-NY 86 (335)
Q Consensus 12 ~~~RVKvY~L~~~--~~W~D--~GTG~~s~~~~e~~~~~~l~V~sE~~~~~LL~s~I~~~~~YqrQqeTlIvW~e~~-~~ 86 (335)
..-||+||.-++. ..|.- .|.|.|+..++- ..+.+-+|. -.+.++++++.|.++-.|.+.-.+.-.|.+.. +.
T Consensus 12 ~s~rA~Vm~~D~~tk~~WvP~g~~~~~V~i~~d~-~rnsyRIvg-~~d~kvvinc~I~~~l~Y~kasp~FHqW~d~~~~~ 89 (168)
T 1i2h_A 12 FSTRAHVFQIDPNTKKNWVPTSKHAVTVSYFYDS-TRNVYRIIS-LDGSKAIINSTITPNMTFTKTSQKFGQWADSRANT 89 (168)
T ss_dssp EEEEEEEEEECTTSSCCSEESCSSCEEEEEEEET-TTTEEEEEE-EETTEEEEEEECCTTCCEEEEETTEEEEEETTTTE
T ss_pred EEEEEEEEEECCCCCCceeecCCCCeEEEEEEcC-CCCEEEEEE-ccCCEEEEecEecCCcEEeeCCcccceeecCCCcE
Confidence 3469999999764 37999 777766555544 344544444 34889999999999999999999999999986 68
Q ss_pred ceeeeccCccchHHHHHHHHHHhc
Q psy1735 87 DLALSFQEKAGCDEIWEKICQVQG 110 (335)
Q Consensus 87 dlALSFQe~~GC~~iW~~I~~vQ~ 110 (335)
-++|.||.++-+...-+.+.++..
T Consensus 90 v~GLnF~Se~eA~~F~~~~~~ale 113 (168)
T 1i2h_A 90 VYGLGFSSEHHLSKFAEKFQEFKE 113 (168)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHH
T ss_pred EEEeccCCHHHHHHHHHHHHHHHH
Confidence 999999999999998888877654
No 15
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=96.97 E-value=0.0048 Score=51.55 Aligned_cols=93 Identities=18% Similarity=0.282 Sum_probs=73.1
Q ss_pred CcEEEEEeCC-CCCceeeceEE---EEEEEe----cCCCceEEEEEe-cCCCCeeEEeeecCCcccceeccEEEEEecCC
Q psy1735 14 RRVKLYALNA-DRQWDDKGTGH---VSSIYV----EKHKGMSLLVRA-EADGTLLLESKIQTDTAYQKQQDTLIVWSERD 84 (335)
Q Consensus 14 ~RVKvY~L~~-~~~W~D~GTG~---~s~~~~----e~~~~~~l~V~s-E~~~~~LL~s~I~~~~~YqrQqeTlIvW~e~~ 84 (335)
-||-||.-++ .+.|.-.|.|- ++..+. +...+.+.++-- -.++.+++++.|.++-.|.+-..+.-.|.+.+
T Consensus 18 ~~A~Vm~~D~~~~~W~p~~~g~ls~v~v~~~~~~~d~~~~~yrI~~~~l~d~~vv~~~~l~~~l~Y~~~~p~FH~w~~~~ 97 (126)
T 2jp2_A 18 VKAVVMTRDDSSGGWFPQEGGGISRVGVCKVMHPEGNGRSGFLIHGERQKDKLVVLECYVRKDLVYTKANPTFHHWKVDN 97 (126)
T ss_dssp EEEEEEEECTTSSSSEECSCCSCEEEEEECCBCTTCSSCBCEEEEEEESSSSCEEEEEEESSCCCEEEEETTEEEEECSS
T ss_pred EEEEEeeEcCCCCCEeeCCCCCcccEEEEEecCCCCCCCCEEEEEEEEcCCCeEEEEEEEeCCceEEecCCcceEEEcCC
Confidence 5888888854 46899999885 333433 334455555443 35889999999999999999999999999885
Q ss_pred CCceeeeccCccchHHHHHHHHH
Q psy1735 85 NYDLALSFQEKAGCDEIWEKICQ 107 (335)
Q Consensus 85 ~~dlALSFQe~~GC~~iW~~I~~ 107 (335)
.-++|.|++.+-+....+.+.+
T Consensus 98 -~~~GLnF~se~eA~~F~~~v~~ 119 (126)
T 2jp2_A 98 -RKFGLTFQSPADARAFDRGVRK 119 (126)
T ss_dssp -SEEEEEESSHHHHHHHHHHHHH
T ss_pred -EEEEEecCCHHHHHHHHHHHHH
Confidence 5599999999999998887754
No 16
>1xod_A Spred1; sprouty, EVH1, peptide-binding, signaling protein; 1.15A {Xenopus tropicalis} SCOP: b.55.1.4 PDB: 1tj6_A
Probab=96.82 E-value=0.0045 Score=51.06 Aligned_cols=94 Identities=20% Similarity=0.271 Sum_probs=71.3
Q ss_pred CcEEEEEeCC-CCCceeeceEEE---EEEEe----cCCCceEEEEEe-cCCCCeeEEeeecCCcccceeccEEEEEecCC
Q psy1735 14 RRVKLYALNA-DRQWDDKGTGHV---SSIYV----EKHKGMSLLVRA-EADGTLLLESKIQTDTAYQKQQDTLIVWSERD 84 (335)
Q Consensus 14 ~RVKvY~L~~-~~~W~D~GTG~~---s~~~~----e~~~~~~l~V~s-E~~~~~LL~s~I~~~~~YqrQqeTlIvW~e~~ 84 (335)
-|+.||.-++ .+.|.-.|.|-+ +..+. +...+.+.+|-- -.++.+++++.|.++-.|.+...+.-.|.+.
T Consensus 9 ~~A~V~~~d~~~~~W~p~~~g~ls~v~i~~~~~~~d~~~~~yrIv~~~l~~~~vv~~~~l~~~~~y~~~~p~Fh~w~~~- 87 (118)
T 1xod_A 9 VRAVVMTRDDSSGGWLQLGGGGLSSVTVSKTLQPGDSGGTEFLVHGERLRDKTVVLECVLRRDLVYNKVTPTFHHWRIG- 87 (118)
T ss_dssp EEEEEEEECSSSSCEEEGGGCCCEEEEEECC---------CCEEEEEETTTCCEEEEEECCTTCEEEEEETTEEEEEET-
T ss_pred EEEEEeeEcCCCCCEeeCCCCCcccEEEEEecCcCCCCCCEEEEEEEECCCCeEEEEEEEeCCcEEEecCCcceEEEeC-
Confidence 5788898854 469999998864 33333 233444555443 3588999999999999999999999999987
Q ss_pred CCceeeeccCccchHHHHHHHHHH
Q psy1735 85 NYDLALSFQEKAGCDEIWEKICQV 108 (335)
Q Consensus 85 ~~dlALSFQe~~GC~~iW~~I~~v 108 (335)
+.-+.|.|+..+.+....+.+.+.
T Consensus 88 ~~~~GL~F~se~eA~~F~~~v~~a 111 (118)
T 1xod_A 88 DKKFGLTFQSPADARAFDRGIRRA 111 (118)
T ss_dssp TEEEEEEESSHHHHHHHHHHHHHH
T ss_pred CEEEEEecCCHHHHHHHHHHHHHH
Confidence 566999999999999998877654
No 17
>2ifs_A N-WAsp, wiskott-aldrich syndrome protien ineracting protein and neural wiskott-aldrich syndrome...; verprolin, polyproline, protein- protein complex; NMR {Homo sapiens}
Probab=96.07 E-value=0.053 Score=47.40 Aligned_cols=94 Identities=20% Similarity=0.391 Sum_probs=74.6
Q ss_pred EEEEEeCCCCCceeeceEEEEEEEecCCCceEEEEEecCCCCeeEEeeecCCcccceeccEEEEEecCCCCceeeeccCc
Q psy1735 16 VKLYALNADRQWDDKGTGHVSSIYVEKHKGMSLLVRAEADGTLLLESKIQTDTAYQKQQDTLIVWSERDNYDLALSFQEK 95 (335)
Q Consensus 16 VKvY~L~~~~~W~D~GTG~~s~~~~e~~~~~~l~V~sE~~~~~LL~s~I~~~~~YqrQqeTlIvW~e~~~~dlALSFQe~ 95 (335)
|.||.-..++.|.-.|+|-+....+-.....+|-+-.-.++.++.+..|-.+-.|+.......+|.+ ++.-++|+|.+.
T Consensus 65 aqLy~a~~~~~W~~~~~Gal~~vkD~~~rsyf~RlvDl~~~~vvweqELY~~f~Y~~~r~~FHtFe~-d~c~~GLnFade 143 (169)
T 2ifs_A 65 VQLYAADRNCMWSKKCSGVACLVKDNPQRSYFLRIFDIKDGKLLWEQELYNNFVYNSPRGYFHTFAG-DTCQVALNFANE 143 (169)
T ss_dssp EEEEEEETTTEEEEEEEEEEEEEEETTTTEEEEEEEETTTCCCCEEEECCSSCCCBCCCSSEEEEEC-SSSEEEEECSCH
T ss_pred EEEEEECCCCeeEecCceEEEEEEECCCCeEEEEEEEccCCeEEEEeecccceeeccCCCeEEEeec-CCcEEEEeeCCH
Confidence 7889886667999999998765544333444453444446789999999999999999999999964 577799999999
Q ss_pred cchHHHHHHHHHHhc
Q psy1735 96 AGCDEIWEKICQVQG 110 (335)
Q Consensus 96 ~GC~~iW~~I~~vQ~ 110 (335)
+-+......+.+-..
T Consensus 144 ~EA~~F~~~V~~~l~ 158 (169)
T 2ifs_A 144 EEAKKFRKAVTDLLG 158 (169)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999998876543
No 18
>1mke_A WIP - N-WAsp, fusion protein consisting of wiskott-aldrich syndrome protein interacting protein...; polyproline, protein-protein complex; NMR {Rattus norvegicus} SCOP: b.55.1.4
Probab=96.00 E-value=0.069 Score=45.92 Aligned_cols=94 Identities=20% Similarity=0.391 Sum_probs=75.0
Q ss_pred EEEEEeCCCCCceeeceEEEEEEEecCCCceEEEEEecCCCCeeEEeeecCCcccceeccEEEEEecCCCCceeeeccCc
Q psy1735 16 VKLYALNADRQWDDKGTGHVSSIYVEKHKGMSLLVRAEADGTLLLESKIQTDTAYQKQQDTLIVWSERDNYDLALSFQEK 95 (335)
Q Consensus 16 VKvY~L~~~~~W~D~GTG~~s~~~~e~~~~~~l~V~sE~~~~~LL~s~I~~~~~YqrQqeTlIvW~e~~~~dlALSFQe~ 95 (335)
|.||.-..++.|.-.|+|-+....+-.....+|-+-.-.++.++.+..|-.+-.|++......+|.. ++.-++|+|.+.
T Consensus 48 aqLy~a~~~~~W~~~~~Gal~~VkD~~~rsyf~RlvDl~~~~viweqELY~~f~Y~~~r~~FHtFe~-d~c~~GLnFade 126 (152)
T 1mke_A 48 VQLYAADRNCMWSKKCSGVACLVKDNPQRSYFLRIFDIKDGKLLWEQELYNNFVYNSPRGYFHTFAG-DTCQVALNFANE 126 (152)
T ss_dssp EEEEEEETTTEEEEEEEEEEEEEEETTTTEEEEEEECSSSCSEEEEEECCSSCCCBCSSSSEEEEEC-SSSEEEEEESSH
T ss_pred EEEEEECCCCceEecCceEEEEEEECCCCeEEEEEEEccCCeEEEEeecccceeeccCCCeEEEEec-CCcEEEEeeCCH
Confidence 7889986667999999998765554333444453444446789999999999999999999999965 577799999999
Q ss_pred cchHHHHHHHHHHhc
Q psy1735 96 AGCDEIWEKICQVQG 110 (335)
Q Consensus 96 ~GC~~iW~~I~~vQ~ 110 (335)
+-+......+.+-..
T Consensus 127 ~EA~~F~~~V~~~l~ 141 (152)
T 1mke_A 127 EEAKKFRKAVTDLLG 141 (152)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999998876543
No 19
>3syx_A Sprouty-related, EVH1 domain-containing protein 1; WH1 domain, human sprouty-related, EVH1 domain-containing PR Q7Z699; 2.45A {Homo sapiens}
Probab=92.57 E-value=0.32 Score=40.74 Aligned_cols=99 Identities=20% Similarity=0.266 Sum_probs=72.0
Q ss_pred ccCCCCcEEEEEeCC-CCCceeeceEEEEEE--Eec-C----CCceEEEEEe-cCCCCeeEEeeecCCcccceeccEEEE
Q psy1735 9 ADDTRRRVKLYALNA-DRQWDDKGTGHVSSI--YVE-K----HKGMSLLVRA-EADGTLLLESKIQTDTAYQKQQDTLIV 79 (335)
Q Consensus 9 ~~~~~~RVKvY~L~~-~~~W~D~GTG~~s~~--~~e-~----~~~~~l~V~s-E~~~~~LL~s~I~~~~~YqrQqeTlIv 79 (335)
|+-.+-|+-|..-++ .+.|.--|-|=++.. |.- . ..+.+.+|-. -.|..++|++.|.++-.|.|=..|.=.
T Consensus 11 ~~~~~~rA~Vm~~Dd~tk~WlP~gg~glS~v~iy~~~~~~~~~~~~yRIvg~r~~d~~vvinc~I~~~l~Ynkatp~FHq 90 (130)
T 3syx_A 11 MSYARVRAVVMTRDDSSGGWLPLGGSGLSSVTVFKVPHQEENGCADFFIRGERLRDKMVVLECMLKKDLIYNKVTPTFHH 90 (130)
T ss_dssp TEEEEEEEEEEEECSSSSCEEESSSSCCEEEEEEEEESSSTTSSEEEEEEEEETTTCCEEEEEECCTTCEEEEEETTEEE
T ss_pred ceeeEEEEEeeeEcCCCCceEeCCCCCCceEEEEeccCCCCCCCcEEEEEEEecCCCeEEEeeeecCCceEEeccccccc
Confidence 444566888888876 468999875533333 321 1 1234444433 257789999999999999999999999
Q ss_pred EecCCCCceeeeccCccchHHHHHHHHHH
Q psy1735 80 WSERDNYDLALSFQEKAGCDEIWEKICQV 108 (335)
Q Consensus 80 W~e~~~~dlALSFQe~~GC~~iW~~I~~v 108 (335)
|.++. .-+-|.||.++.....=+.+..+
T Consensus 91 Wrd~~-~~yGL~F~S~~dA~~F~~~~~~A 118 (130)
T 3syx_A 91 WKIDD-KKFGLTFQSPADARAFDRGIRRA 118 (130)
T ss_dssp EEETT-EEEEEEESSHHHHHHHHHHHHHH
T ss_pred ccccC-eEeecccCCHHHHHHHHHHHHHH
Confidence 99986 55999999999998877766443
No 20
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=91.52 E-value=1.7 Score=36.30 Aligned_cols=95 Identities=17% Similarity=0.265 Sum_probs=65.5
Q ss_pred CcEEEEEeCCC-CCceeeceEEEEEEEe-cCCCceEEEEEecCCCCeeEEeeecCCcccceeccEEEEEecCCCCceeee
Q psy1735 14 RRVKLYALNAD-RQWDDKGTGHVSSIYV-EKHKGMSLLVRAEADGTLLLESKIQTDTAYQKQQDTLIVWSERDNYDLALS 91 (335)
Q Consensus 14 ~RVKvY~L~~~-~~W~D~GTG~~s~~~~-e~~~~~~l~V~sE~~~~~LL~s~I~~~~~YqrQqeTlIvW~e~~~~dlALS 91 (335)
.-|-||..+++ ++|+-.|..=....+. +..+-..++|-+-.+.+-+ .-.|.++..++.|++-|| |....+.-+.|-
T Consensus 36 ~~v~vY~f~~~~~~W~K~~iEG~LFv~~R~~~P~~~~ivLNR~~~~n~-~~~l~~~~~~e~~~~~li-~r~~~~~I~GiW 113 (134)
T 2lyd_A 36 SHVAFYTFNSSQNEWEKTDVEGAFFIYHRNAEPFHSIFINNRLNTTSF-VEPITGSLELQSQPPFLL-YRNERSRIRGFW 113 (134)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEEEEEEECSSSSSEEEEEEETTTTEEE-EEECCSSCEEEEETTEEE-EEEGGGEEEEEE
T ss_pred CeEEEEEecCCcCceeEcCCcceEEEEEccCCCceEEEEEcCCCCcce-eEEcCCCcEEEeeCCEEE-EECCCCcEEEEE
Confidence 46889999764 5899886531111121 2233455666655444433 356999999999988655 665556678999
Q ss_pred ccCccchHHHHHHHHHHhc
Q psy1735 92 FQEKAGCDEIWEKICQVQG 110 (335)
Q Consensus 92 FQe~~GC~~iW~~I~~vQ~ 110 (335)
|-+.+-|..|.+.+..+.+
T Consensus 114 f~~~~d~~~i~~~l~~l~~ 132 (134)
T 2lyd_A 114 FYNSEECDRISGLVNGLLK 132 (134)
T ss_dssp ESSHHHHHHHHHHHHHHHH
T ss_pred ecChHHHHHHHHHHHHHHh
Confidence 9999999999999988765
No 21
>2qkl_A DCP1 protein, SPBC3B9.21 protein; protein-protein complex, hydrolase; 2.33A {Schizosaccharomyces pombe} PDB: 2qkm_A*
Probab=89.43 E-value=3.4 Score=34.20 Aligned_cols=91 Identities=10% Similarity=0.163 Sum_probs=61.9
Q ss_pred CCcEEEEEeCC-CCCceeeceE---EEEEEEecCCCceEEEEEecCCCCeeEEeeecCCcccceeccEEEEEecCCCCce
Q psy1735 13 RRRVKLYALNA-DRQWDDKGTG---HVSSIYVEKHKGMSLLVRAEADGTLLLESKIQTDTAYQKQQDTLIVWSERDNYDL 88 (335)
Q Consensus 13 ~~RVKvY~L~~-~~~W~D~GTG---~~s~~~~e~~~~~~l~V~sE~~~~~LL~s~I~~~~~YqrQqeTlIvW~e~~~~dl 88 (335)
.--|=||..+. .++|...|.. |+.. .. .+...++|-+-.+.+-+. -.|.++..++-|++-|| ++.+.+.-+
T Consensus 30 a~~v~vY~f~~~~~~W~K~~iEGtLFv~~--R~-~P~~~~iVlNR~~~~n~~-~~i~~~~~~e~~~~~l~-~r~~~~~i~ 104 (127)
T 2qkl_A 30 ASHVAVYQFDVGSQKWLKTSIEGTFFLVK--DQ-RARVGYVILNRNSPENLY-LFINHPSNVHLVDRYLI-HRTENQHVV 104 (127)
T ss_dssp EEEEEEECC------CCEEEEEEEEEEEE--ET-TCCEEEEEEESSSSCCEE-EEECSGGGEEEETTEEE-EEETTTEEE
T ss_pred CCeEEEEEecCCCCceEEcCcEEEEEEEE--cc-CCceEEEEEcCCCCcCee-EecCCCceEEEeCCEEE-EEcCCCcEE
Confidence 35688999986 4699988653 3221 12 344566666655544443 56999999998888555 776667788
Q ss_pred eeeccCccchHHHHHHHHHH
Q psy1735 89 ALSFQEKAGCDEIWEKICQV 108 (335)
Q Consensus 89 ALSFQe~~GC~~iW~~I~~v 108 (335)
+|=|-+++-|..|.+.+..+
T Consensus 105 GiWf~~~~d~~~i~~~l~~l 124 (127)
T 2qkl_A 105 GLWMFDPNDMSRIFNIVKES 124 (127)
T ss_dssp EEEESSTHHHHHHHHHHHHH
T ss_pred EEEEEchHHHHHHHHHHHHH
Confidence 99999999999999988654
No 22
>2crp_A RGS5, regulator of G-protein signaling 5; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.36 E-value=13 Score=30.52 Aligned_cols=59 Identities=10% Similarity=0.262 Sum_probs=42.2
Q ss_pred CcCCCccCcCCHHHHHHHHHHhcCChhHHHHHHHHHhchhHHHHHHHHHHHHHhcCChhh
Q psy1735 139 PIELPPCEINRLEEIKELMQTCLASPVRKEKLAEAIESEGYIRKLVGIFHMCEDLENLPG 198 (335)
Q Consensus 139 ~~~LP~~~l~nL~eI~~~l~~~~~s~~~re~l~~~i~~~~Yi~kL~~lF~~cEd~ed~~~ 198 (335)
++.+|.|+..........+...+.+|.++..+..++.+ .|-...+.++..||+.+...+
T Consensus 11 ~~~~~~~s~~~~~~w~~sl~~iL~~~~g~~~F~~Fl~~-e~s~Enl~Fw~~ve~yk~~~~ 69 (150)
T 2crp_A 11 PAKTQKTSLDEALQWRDSLDKLLQNNYGLASFKSFLKS-EFSEENLEFWIACEDYKKIKS 69 (150)
T ss_dssp CCCCCCCCHHHHTHHHHCHHHHHHSHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHTCCC
T ss_pred CccCCCCCHHHHHHHHHhHHHHHCCHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHccCC
Confidence 45566555444444445566677789999999998874 567889999999998776653
No 23
>2dlr_A RGS10, regulator of G-protein signaling 10; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.14 E-value=81 Score=25.49 Aligned_cols=49 Identities=14% Similarity=0.312 Sum_probs=35.2
Q ss_pred CHHHHHHHHHHhcCChhHHHHHHHHHhchhHHHHHHHHHHHHHhcCChhh
Q psy1735 149 RLEEIKELMQTCLASPVRKEKLAEAIESEGYIRKLVGIFHMCEDLENLPG 198 (335)
Q Consensus 149 nL~eI~~~l~~~~~s~~~re~l~~~i~~~~Yi~kL~~lF~~cEd~ed~~~ 198 (335)
........+...+.+|.++..+..++.+ .+-...+.++..||+.+...+
T Consensus 11 ~~~~w~~sl~~iL~~~~g~~~F~~FL~~-e~~~Enl~Fw~~ve~yk~~~~ 59 (149)
T 2dlr_A 11 STAKWAASLENLLEDPEGVKRFREFLKK-EFSEENVLFWLACEDFKKMQD 59 (149)
T ss_dssp CHHHHHHCHHHHHHSHHHHHHHHHHHHH-HTCTHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHhHHHHHCCHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhccCC
Confidence 3444444555556678899999998874 456888999999998776544
No 24
>3c7l_A Regulator of G-protein signaling 16; RGS, RGS16, GAP, GTPase activating protein, heterotrimeric G-protein, lipoprotein, palmitate, phosphoprotein; 1.89A {Mus musculus} PDB: 3c7k_B* 2ik8_B*
Probab=22.61 E-value=1.6e+02 Score=23.27 Aligned_cols=48 Identities=10% Similarity=0.219 Sum_probs=37.0
Q ss_pred HHHHHHHHHHhcCChhHHHHHHHHHhchhHHHHHHHHHHHHHhcCChhh
Q psy1735 150 LEEIKELMQTCLASPVRKEKLAEAIESEGYIRKLVGIFHMCEDLENLPG 198 (335)
Q Consensus 150 L~eI~~~l~~~~~s~~~re~l~~~i~~~~Yi~kL~~lF~~cEd~ed~~~ 198 (335)
.......+...+.+|.++..+..++. ..+-...+.++..||+.+...+
T Consensus 15 ~~~w~~sl~~iL~~p~g~~~F~~Fl~-~e~s~Enl~Fw~~ve~~k~~~~ 62 (137)
T 3c7l_A 15 VLGWRESFDLLLNSKNGVAAFHAFLK-TEFSEENLEFWLACEEFKKIRS 62 (137)
T ss_dssp HHHHHHCHHHHTTCHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHhHHHHHCChHHHHHHHHHHH-HhCCHHHHHHHHHHHHHhccCC
Confidence 33444556667778999999999887 4566888999999999888764
No 25
>2oqb_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase, transcriptional regulati activation domain; 1.69A {Rattus norvegicus}
Probab=21.93 E-value=3.2e+02 Score=22.09 Aligned_cols=94 Identities=4% Similarity=0.112 Sum_probs=64.2
Q ss_pred EEEEEeCCCC-Cceeece-EEEEEEEecCCCceEEEEEecCCCCeeEEeeecCCcccceeccEEEEEecCCCCceeeecc
Q psy1735 16 VKLYALNADR-QWDDKGT-GHVSSIYVEKHKGMSLLVRAEADGTLLLESKIQTDTAYQKQQDTLIVWSERDNYDLALSFQ 93 (335)
Q Consensus 16 VKvY~L~~~~-~W~D~GT-G~~s~~~~e~~~~~~l~V~sE~~~~~LL~s~I~~~~~YqrQqeTlIvW~e~~~~dlALSFQ 93 (335)
|-|-.+++++ +-.-+=- .=|.....-+.+|+.+.+.++. +..+.+-.|..++.+.|-+-+=+.-+= .+..+-|-|.
T Consensus 13 v~v~~I~d~~~~~~~ky~~q~v~L~~~ydpqg~sv~i~~~~-~~~l~ef~V~~~TEc~rVGk~S~litl-g~~slLl~Fa 90 (117)
T 2oqb_A 13 ARLLTIGDANGEIQRHAEQQALRLEVRAGPDAAGIALYSHE-DVCVFKCSVSRETECSRVGRQSFIITL-GCNSVLIQFA 90 (117)
T ss_dssp EEEEEEECTTSSCEEEEEEEEEEEEEEECSSEEEEEEECTT-CCEEEEEEEETTSEEEEETTTEEEEEE-TTEEEEEECS
T ss_pred eEEEEEeCCCCcEeecccCceEEEEEEECCCCcEEEEEcCC-CeEEEEEEecCCccceeecCeEEEEEE-CCcEEEEEeC
Confidence 6666776643 4433222 3333333334466666655544 778899999999999998854333332 3467789999
Q ss_pred CccchHHHHHHHHHHhcC
Q psy1735 94 EKAGCDEIWEKICQVQGK 111 (335)
Q Consensus 94 e~~GC~~iW~~I~~vQ~~ 111 (335)
....|....+-|..+++.
T Consensus 91 s~~d~~~F~~~l~k~~~~ 108 (117)
T 2oqb_A 91 TPHDFCSFYNILKTCRGH 108 (117)
T ss_dssp SHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHhcC
Confidence 999999999999999884
No 26
>2dlv_A RGS18, regulator of G-protein signaling 18; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.56 E-value=60 Score=25.89 Aligned_cols=41 Identities=15% Similarity=0.324 Sum_probs=31.9
Q ss_pred HHHhcCChhHHHHHHHHHhchhHHHHHHHHHHHHHhcCChhh
Q psy1735 157 MQTCLASPVRKEKLAEAIESEGYIRKLVGIFHMCEDLENLPG 198 (335)
Q Consensus 157 l~~~~~s~~~re~l~~~i~~~~Yi~kL~~lF~~cEd~ed~~~ 198 (335)
+...+.+|.++..+..++. ..+-...+.++..||+.+...+
T Consensus 19 l~~iL~~~~~~~~F~~Fl~-~e~s~enl~Fw~~ve~~k~~~~ 59 (140)
T 2dlv_A 19 FDKLLSHRDGLEAFTRFLK-TEFSEENIEFWIACEDFKKSKG 59 (140)
T ss_dssp HHHHHHSHHHHHHHHHHHH-HTTCTHHHHHHHHHHHHTTCCH
T ss_pred HHHHHCChHHHHHHHHHHH-HhCCHHHHHHHHHHHHHhccCC
Confidence 4445557889999998886 4566789999999999888764
No 27
>1zv4_X RGS17, regulator of G-protein signaling 17; human RGSZ2, human RGS17(Z2), regulator of G-protein signali opioid receptor interacting protein; 2.40A {Homo sapiens}
Probab=21.31 E-value=63 Score=26.71 Aligned_cols=41 Identities=17% Similarity=0.357 Sum_probs=32.3
Q ss_pred HHHHhcCChhHHHHHHHHHhchhHHHHHHHHHHHHHhcCChh
Q psy1735 156 LMQTCLASPVRKEKLAEAIESEGYIRKLVGIFHMCEDLENLP 197 (335)
Q Consensus 156 ~l~~~~~s~~~re~l~~~i~~~~Yi~kL~~lF~~cEd~ed~~ 197 (335)
.+...+.+|.++..+..++.+ .|-...+.++..||+.+...
T Consensus 36 sl~~iL~dp~g~~~F~~FL~~-e~s~Enl~Fw~~ve~yk~~~ 76 (158)
T 1zv4_X 36 NFDKMMKAPAGRNLFREFLRT-EYSEENLLFWLACEDLKKEQ 76 (158)
T ss_dssp CHHHHHTSHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHCC
T ss_pred hHHHHhCCHHHHHHHHHHHHH-ccCHhHHHHHHHHHHHHhcC
Confidence 456667789999999998874 56788999999999776653
Done!