Your job contains 1 sequence.
>psy17350
MTLSLEVLGLNPGGVLLNAYFKMNARQIKRLENKKRKMDALVEIKTLNEADKQMMHPYVI
DTSVIFNTTGIRTHKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKLKLSKGDLC
STKPAHHTVNLGFSLNDYLMFAHELPGLRDRFVKMEVIPPSSYTTSLVHELVMSSRHMEA
QDMTPSKETSLPSNVTNSTHSPSQTIKSAFPIGTQPVRSANTESLSATSQNTKSQSQNIE
SAFQNTKSQSQYIESAFQNTKSQPQNIQLASQSTKSKSEIPLNDESKSATPQNTESQSVA
SAKRKSSESKSVEDKFPRTMLLLSALQMIEEDYPIPLRGELSAKFSKYINTKEVYAEVTP
TSPLYGLDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALL
APVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIFNTTGIRTHKP
KLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKLKLSKGDLIGLKL
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17350
(528 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0035707 - symbol:CG8368 species:7227 "Drosophila m... 618 5.4e-65 2
WB|WBGene00015462 - symbol:C05C8.5 species:6239 "Caenorha... 441 1.4e-41 1
UNIPROTKB|Q2T9U5 - symbol:Q2T9U5 "Putative RNA exonucleas... 410 1.8e-37 1
UNIPROTKB|E2RFH9 - symbol:LOC479820 "Uncharacterized prot... 401 1.6e-36 1
UNIPROTKB|E2RFH4 - symbol:LOC479820 "Uncharacterized prot... 400 1.7e-36 1
UNIPROTKB|Q96IC2 - symbol:44M2.3 "Putative RNA exonucleas... 388 4.2e-35 1
UNIPROTKB|E1BR93 - symbol:LOC427001 "Uncharacterized prot... 386 6.4e-35 1
UNIPROTKB|F1P5D1 - symbol:LOC427001 "Uncharacterized prot... 386 6.9e-35 1
RGD|1305412 - symbol:Exnef "exonuclease NEF-sp" species:1... 376 7.7e-34 1
UNIPROTKB|F1M6V9 - symbol:Exnef "Protein Exnef" species:1... 376 7.7e-34 1
UNIPROTKB|G4MYV4 - symbol:MGG_15523 "Uncharacterized prot... 370 3.0e-33 1
POMBASE|SPAC637.09 - symbol:SPAC637.09 "ribonuclease H70 ... 365 1.9e-32 1
UNIPROTKB|F1RPB4 - symbol:F1RPB4 "Uncharacterized protein... 350 2.4e-31 2
ASPGD|ASPL0000067196 - symbol:AN7566 species:162425 "Emer... 347 2.6e-29 1
CGD|CAL0006149 - symbol:orf19.6195 species:5476 "Candida ... 342 1.2e-28 1
TAIR|locus:2145244 - symbol:AT5G25800 species:3702 "Arabi... 336 2.6e-28 1
SGD|S000003508 - symbol:RNH70 "3'-5' exoribonuclease" spe... 332 7.0e-28 1
DICTYBASE|DDB_G0291590 - symbol:rexo1 "RNA exonuclease 1"... 324 1.7e-27 2
FB|FBgn0039544 - symbol:CG12877 species:7227 "Drosophila ... 311 2.1e-27 2
RGD|1564472 - symbol:RGD1564472 "similar to Transcription... 313 6.8e-27 2
UNIPROTKB|H3BQ98 - symbol:LOC81691 "Protein LOC81691" spe... 291 3.3e-25 1
UNIPROTKB|A0PJM3 - symbol:REXO1L2P "Putative exonuclease ... 305 8.3e-25 2
UNIPROTKB|Q8IX06 - symbol:REXO1L1 "Exonuclease GOR" speci... 306 1.5e-24 2
UNIPROTKB|F5GW92 - symbol:REXO1L10P "Protein REXO1L10P" s... 305 2.0e-24 2
ZFIN|ZDB-GENE-030131-1650 - symbol:rexo1 "REX1, RNA exonu... 287 4.4e-24 2
UNIPROTKB|E2QX02 - symbol:REXO1 "Uncharacterized protein"... 299 3.4e-23 1
UNIPROTKB|F1SDH3 - symbol:LOC100525449 "Uncharacterized p... 297 5.7e-23 1
UNIPROTKB|H3BM72 - symbol:LOC81691 "Protein LOC81691" spe... 270 7.1e-23 1
UNIPROTKB|Q8N1G1 - symbol:REXO1 "RNA exonuclease 1 homolo... 300 1.5e-22 2
UNIPROTKB|E1BDF8 - symbol:LOC788506 "Uncharacterized prot... 287 7.6e-22 1
MGI|MGI:1914182 - symbol:Rexo1 "REX1, RNA exonuclease 1 h... 287 7.6e-22 1
ZFIN|ZDB-GENE-061013-448 - symbol:zgc:152968 "zgc:152968"... 265 8.3e-22 2
UNIPROTKB|F1N3K9 - symbol:LOC100335177 "Uncharacterized p... 271 1.0e-21 1
UNIPROTKB|F1P0Z1 - symbol:REXO1 "Uncharacterized protein"... 274 1.1e-20 2
UNIPROTKB|F1P8U5 - symbol:F1P8U5 "Uncharacterized protein... 258 2.8e-20 1
UNIPROTKB|I3LLP7 - symbol:I3LLP7 "Uncharacterized protein... 261 3.7e-19 3
TAIR|locus:2169717 - symbol:SDN2 "small RNA degrading nuc... 242 2.7e-17 2
FB|FBgn0261548 - symbol:CG42666 species:7227 "Drosophila ... 245 1.3e-16 2
TAIR|locus:2083163 - symbol:SDN1 "small RNA degrading nuc... 228 2.8e-16 1
ASPGD|ASPL0000065793 - symbol:AN10955 species:162425 "Eme... 200 7.8e-16 2
ZFIN|ZDB-GENE-070928-8 - symbol:isg20l2 "interferon stimu... 218 8.9e-16 1
POMBASE|SPBC1604.09c - symbol:SPBC1604.09c "exoribonuclea... 189 8.9e-16 2
UNIPROTKB|I3L751 - symbol:REXO4 "Uncharacterized protein"... 222 1.0e-15 2
UNIPROTKB|F1N5B5 - symbol:REXO4 "Uncharacterized protein"... 224 1.4e-15 2
WB|WBGene00004095 - symbol:pqe-1 species:6239 "Caenorhabd... 230 1.4e-15 2
TAIR|locus:2155563 - symbol:SDN3 "small RNA degrading nuc... 230 6.5e-15 2
POMBASE|SPAC1782.08c - symbol:rex3 "exonuclease Rex3 (pre... 217 1.1e-14 1
UNIPROTKB|Q9GZR2 - symbol:REXO4 "RNA exonuclease 4" speci... 213 1.7e-14 1
CGD|CAL0006310 - symbol:orf19.4948 species:5476 "Candida ... 212 1.8e-14 1
UNIPROTKB|F1PBR5 - symbol:REXO4 "Uncharacterized protein"... 207 7.2e-14 1
WB|WBGene00013244 - symbol:Y56A3A.33 species:6239 "Caenor... 205 8.0e-14 1
MGI|MGI:2684957 - symbol:Rexo4 "REX4, RNA exonuclease 4 h... 201 1.1e-13 2
UNIPROTKB|H9KZR7 - symbol:H9KZR7 "Uncharacterized protein... 182 3.0e-13 2
RGD|1306220 - symbol:Rexo4 "REX4, RNA exonuclease 4 homol... 199 5.7e-13 1
SGD|S000004097 - symbol:REX3 "RNA exonuclease" species:49... 194 7.8e-13 2
TAIR|locus:2086320 - symbol:AT3G15080 species:3702 "Arabi... 189 9.0e-13 1
UNIPROTKB|Q8WTP8 - symbol:AEN "Apoptosis-enhancing nuclea... 192 1.5e-12 1
UNIPROTKB|E2R2F5 - symbol:ISG20 "Uncharacterized protein"... 174 2.1e-12 1
UNIPROTKB|F6X5D6 - symbol:ISG20 "Uncharacterized protein"... 174 2.1e-12 1
RGD|1306407 - symbol:Isg20 "interferon stimulated exonucl... 171 4.5e-12 1
UNIPROTKB|F1SRT3 - symbol:AEN "Uncharacterized protein" s... 188 4.5e-12 1
UNIPROTKB|H9L3P1 - symbol:H9L3P1 "Uncharacterized protein... 188 4.6e-12 1
UNIPROTKB|H9L3P2 - symbol:H9L3P2 "Uncharacterized protein... 188 4.7e-12 1
UNIPROTKB|J9PA78 - symbol:AEN "Uncharacterized protein" s... 185 9.9e-12 1
UNIPROTKB|F1PWV6 - symbol:AEN "Uncharacterized protein" s... 185 1.2e-11 1
MGI|MGI:1915298 - symbol:Aen "apoptosis enhancing nucleas... 184 1.5e-11 1
UNIPROTKB|F1MZX4 - symbol:LOC614749 "Uncharacterized prot... 183 1.7e-11 1
RGD|1305051 - symbol:Aen "apoptosis enhancing nuclease" s... 183 1.9e-11 1
UNIPROTKB|E1BNM5 - symbol:ISG20 "Uncharacterized protein"... 165 2.0e-11 1
UNIPROTKB|G3N2Q8 - symbol:ISG20 "Uncharacterized protein"... 165 2.0e-11 1
UNIPROTKB|F8WG03 - symbol:Aen "Apoptosis-enhancing nuclea... 183 2.4e-11 1
UNIPROTKB|E2R7T9 - symbol:REXO4 "Uncharacterized protein"... 183 4.4e-11 1
UNIPROTKB|E1C018 - symbol:AEN "Uncharacterized protein" s... 178 4.6e-11 1
UNIPROTKB|Q5REE2 - symbol:AEN "Apoptosis-enhancing nuclea... 179 5.0e-11 1
UNIPROTKB|F1NQP7 - symbol:Gga.48606 "Uncharacterized prot... 182 5.6e-11 2
TAIR|locus:2083153 - symbol:AT3G50090 species:3702 "Arabi... 176 1.1e-10 1
FB|FBgn0036405 - symbol:CG6833 species:7227 "Drosophila m... 172 1.3e-10 2
UNIPROTKB|I3LB04 - symbol:ISG20 "Uncharacterized protein"... 153 3.9e-10 1
MGI|MGI:2140076 - symbol:Isg20l2 "interferon stimulated e... 158 1.3e-09 2
ZFIN|ZDB-GENE-120215-216 - symbol:si:ch73-209e20.4 "si:ch... 161 1.7e-09 2
UNIPROTKB|Q96AZ6 - symbol:ISG20 "Interferon-stimulated ge... 147 1.7e-09 1
TAIR|locus:2066406 - symbol:AT2G48100 species:3702 "Arabi... 165 2.4e-09 1
SGD|S000005440 - symbol:REX4 "Putative RNA exonuclease po... 159 2.6e-09 2
UNIPROTKB|Q66UW5 - symbol:Isg20 "Interferon-stimulated ge... 145 2.9e-09 1
UNIPROTKB|Q2YDK1 - symbol:ISG20L2 "Interferon-stimulated ... 162 3.8e-09 2
RGD|1359413 - symbol:Isg20l2 "interferon stimulated exonu... 160 1.0e-08 1
WB|WBGene00012465 - symbol:Y17G7B.12 species:6239 "Caenor... 155 1.4e-08 1
DICTYBASE|DDB_G0281327 - symbol:rexo4 "RNA exonuclease 4"... 144 2.4e-08 2
DICTYBASE|DDB_G0269694 - symbol:pan2 "polyA specific ribo... 140 4.8e-08 3
CGD|CAL0003518 - symbol:orf19.5220 species:5476 "Candida ... 151 5.2e-08 1
UNIPROTKB|E2QS77 - symbol:ISG20L2 "Uncharacterized protei... 152 7.1e-08 1
UNIPROTKB|F1RHI9 - symbol:ISG20L2 "Uncharacterized protei... 155 7.2e-08 2
UNIPROTKB|Q9H9L3 - symbol:ISG20L2 "Interferon-stimulated ... 149 2.6e-07 2
ASPGD|ASPL0000071877 - symbol:AN5013 species:162425 "Emer... 127 5.5e-07 3
ASPGD|ASPL0000070457 - symbol:AN4357 species:162425 "Emer... 144 1.3e-06 1
TAIR|locus:2170533 - symbol:AT5G40310 species:3702 "Arabi... 140 1.6e-06 1
UNIPROTKB|G4N4M9 - symbol:MGG_06005 "RNA exonuclease 3" s... 111 2.6e-05 3
TAIR|locus:2086839 - symbol:AT3G27970 species:3702 "Arabi... 126 6.0e-05 1
UNIPROTKB|Q5F450 - symbol:PAN2 "PAB-dependent poly(A)-spe... 123 0.00070 1
>FB|FBgn0035707 [details] [associations]
symbol:CG8368 species:7227 "Drosophila melanogaster"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:AE014296 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 GeneTree:ENSGT00630000089807 EMBL:BT023775
RefSeq:NP_648050.1 RefSeq:NP_729177.1 UniGene:Dm.30144 SMR:Q9VRX7
IntAct:Q9VRX7 MINT:MINT-298361 EnsemblMetazoa:FBtr0076976
EnsemblMetazoa:FBtr0076977 GeneID:38740 KEGG:dme:Dmel_CG8368
UCSC:CG8368-RA FlyBase:FBgn0035707 InParanoid:Q9VRX7 OMA:DKFPRTK
OrthoDB:EOG49P8DJ GenomeRNAi:38740 NextBio:810128 Uniprot:Q9VRX7
Length = 681
Score = 618 (222.6 bits), Expect = 5.4e-65, Sum P(2) = 5.4e-65
Identities = 126/206 (61%), Positives = 153/206 (74%)
Query: 314 DKFPRTMLLLSALQMIEEDYPIPLRGELSAKFSKYINTKEVYAEVTPTSPLYGLDCEMCK 373
DKFPRT LLLSALQM++E YPIPL+GEL +F + TK++YA VT SP++G+DCEMC
Sbjct: 306 DKFPRTKLLLSALQMVDEGYPIPLQGELHTRFQNFKFTKDLYAPVTNRSPMFGVDCEMCH 365
Query: 374 TSNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVATRLEHVQKI 433
T NELTR+++V+E VYE+LV P N IT+YLT YSGIT ++ V RL+ VQK
Sbjct: 366 TEAGCNELTRISIVNENYETVYETLVLPNNRITDYLTQYSGITAEIMEQVTKRLDVVQKE 425
Query: 434 LSELLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIFNTTGIRTHKPKLKMLTSHFLGLD 493
+SELLPPDAILVGQSLN DL+A+KMMHPYVIDTSV FNT+G+R K KLK L FL
Sbjct: 426 VSELLPPDAILVGQSLNSDLNAMKMMHPYVIDTSVCFNTSGVRRRKTKLKDLAKTFLQEI 485
Query: 494 IQNQDGGHCSKEDAIAALRLVKLKLS 519
IQ GH S ED+ A L+LVK KL+
Sbjct: 486 IQENIDGHDSIEDSRATLKLVKKKLA 511
Score = 171 (65.3 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 51/115 (44%), Positives = 65/115 (56%)
Query: 39 DALVEIKTLNEA--DKQMMHPYVIDTSVIFNTTGIRTHKPKLKMLTSHFLGLDIQNQDGG 96
DA++ ++LN +MMHPYVIDTSV FNT+G+R K KLK L FL IQ G
Sbjct: 433 DAILVGQSLNSDLNAMKMMHPYVIDTSVCFNTSGVRRRKTKLKDLAKTFLQEIIQENIDG 492
Query: 97 HCSKEDAIAALRLVKLKLSK----GD--LCSTKPAHHTVNL--GFSLNDYLMFAH 143
H S ED+ A L+LVK KL+ GD L K N G ++++ L FAH
Sbjct: 493 HDSIEDSRATLKLVKKKLANSIEFGDQILTQHKQLQELANASSGDTISNNL-FAH 546
Score = 62 (26.9 bits), Expect = 5.4e-65, Sum P(2) = 5.4e-65
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 23 MNARQIKRLENKKRKMDALVEIKTLNEADK 52
M+ +Q +R E KK+K+ AL + LN+ D+
Sbjct: 5 MSTKQHERNEKKKKKLAALANLMELNDRDR 34
>WB|WBGene00015462 [details] [associations]
symbol:C05C8.5 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 GeneTree:ENSGT00630000089807 EMBL:FO080353 PIR:T31744
RefSeq:NP_504838.1 ProteinModelPortal:O16312 SMR:O16312
PaxDb:O16312 EnsemblMetazoa:C05C8.5.1 EnsemblMetazoa:C05C8.5.2
GeneID:179116 KEGG:cel:CELE_C05C8.5 UCSC:C05C8.5 CTD:179116
WormBase:C05C8.5 HOGENOM:HOG000021553 InParanoid:O16312 OMA:DAWAAMR
NextBio:903992 Uniprot:O16312
Length = 594
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 95/212 (44%), Positives = 133/212 (62%)
Query: 315 KFPRTMLLLSALQMIEEDYPIPLRGELSAKFSKYINTKEVYAEVTPTSPLYGLDCEMCKT 374
K ++ +L+ Q+ + YP P GE + TK+ Y +++ +SP++ +DCEMC+T
Sbjct: 179 KHDKSHFVLTTEQLAQRRYPFP--GEEGV-----VPTKQGYKKISASSPMFSVDCEMCET 231
Query: 375 SNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVATRLEHVQKIL 434
ELTR+++VDE EN + ++LVKP IT+Y+T +SGIT ++ V T L VQK +
Sbjct: 232 DVANRELTRISIVDEFENTILDTLVKPEGRITDYVTRWSGITPDMMEGVTTTLGDVQKAI 291
Query: 435 SELLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIFNTTGIRTH-KPKLKMLTSHFLGLD 493
LLPPDAILVG SL DL A+KM HP+ +D + N T T + LK LT FLG
Sbjct: 292 QSLLPPDAILVGHSLEHDLQAMKMTHPFCLDVGHVLNYTNSNTEFRNSLKNLTELFLGAQ 351
Query: 494 IQNQDGGHCSKEDAIAALRLVKLKLSKGDLIG 525
IQ++ G HCS EDA AA+RL +LKL KG + G
Sbjct: 352 IQSEFG-HCSYEDAWAAMRLAQLKLEKGLMFG 382
Score = 142 (55.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 32/66 (48%), Positives = 41/66 (62%)
Query: 53 QMMHPYVIDTSVIFNTTGIRTH-KPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVK 111
+M HP+ +D + N T T + LK LT FLG IQ++ G HCS EDA AA+RL +
Sbjct: 314 KMTHPFCLDVGHVLNYTNSNTEFRNSLKNLTELFLGAQIQSEFG-HCSYEDAWAAMRLAQ 372
Query: 112 LKLSKG 117
LKL KG
Sbjct: 373 LKLEKG 378
>UNIPROTKB|Q2T9U5 [details] [associations]
symbol:Q2T9U5 "Putative RNA exonuclease NEF-sp"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 GeneTree:ENSGT00630000089807 EMBL:BC111262
IPI:IPI00691015 RefSeq:NP_001033243.1 UniGene:Bt.53153
ProteinModelPortal:Q2T9U5 PRIDE:Q2T9U5 Ensembl:ENSBTAT00000008458
GeneID:532864 KEGG:bta:532864 HOGENOM:HOG000015091
HOVERGEN:HBG101031 InParanoid:Q2T9U5 OMA:KMIHPYV NextBio:20875829
ArrayExpress:Q2T9U5 Uniprot:Q2T9U5
Length = 783
Score = 410 (149.4 bits), Expect = 1.8e-37, P = 1.8e-37
Identities = 100/205 (48%), Positives = 128/205 (62%)
Query: 319 TMLLLSALQMIEEDYPIPLRGELSAKFSKYINTKEVYAEVTPTSPLYGLDCEMCKTSNDQ 378
T LL+ +M + Y PL+G L + ++ TK VT SPL+GLDCEMC TS +
Sbjct: 190 TRCLLTKEEM--KTYHFPLQGFLDCE--NFVPTK-CNGSVTDNSPLFGLDCEMCLTSKGR 244
Query: 379 NELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVATRLEHVQKILSELL 438
ELTR++LV E V + LVKP N I +YLT++SGIT+ +L PV T+L+ VQ+ L LL
Sbjct: 245 -ELTRISLVAEGGGCVMDELVKPDNKIVDYLTSFSGITKKILNPVTTKLKDVQRRLKILL 303
Query: 439 PPDAILVGQSLNCDLHALKMMHPYVIDTSVIF-NTTGIRTHKPKLKMLTSHFLGLDIQNQ 497
PPDA+LVG SL+ DL ALKM+HPYVIDTS+++ G R KLK L LG DIQ
Sbjct: 304 PPDAVLVGHSLDLDLRALKMIHPYVIDTSLLYVREQGRRF---KLKFLAKAILGKDIQCP 360
Query: 498 DG-GHCSKEDAIAALRLVKLKLSKG 521
D GH + EDA L L + L G
Sbjct: 361 DRLGHDATEDARTTLELARYFLKYG 385
>UNIPROTKB|E2RFH9 [details] [associations]
symbol:LOC479820 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00630000089807
OMA:KMIHPYV EMBL:AAEX03004472 Ensembl:ENSCAFT00000028467
Uniprot:E2RFH9
Length = 774
Score = 401 (146.2 bits), Expect = 1.6e-36, P = 1.6e-36
Identities = 107/275 (38%), Positives = 150/275 (54%)
Query: 252 YIESAFQNT-KSQPQNIQLASQSTKSKSEIPLNDESK--SATPQNTESQXXXXXXXXXXX 308
++ AF++ + P + + K + D+SK + +T S+
Sbjct: 119 FLRKAFRHKFRLPPPSSNFLADIIGLKKKQATRDQSKMGEGSLPSTSSKVRVNLQNDPII 178
Query: 309 XXXXXDKFPRTMLLLSALQMIEEDYPIPLRGELSAKFSKYINTKEVYAEVTPTSPLYGLD 368
K T LL+ +M + + PL+G + ++ TK +T SPL+GLD
Sbjct: 179 QKYGSKKVCLTRCLLTKEEM--KTFHFPLQG--CPDCANFVPTK-CNGSITDNSPLFGLD 233
Query: 369 CEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVATRLE 428
CEMC TS + ELTR++LV E + V + LVKP N I +YLT++SGIT+ +L PV TRL+
Sbjct: 234 CEMCVTSKGR-ELTRISLVAEGGSCVMDELVKPDNKILDYLTSFSGITKKILNPVTTRLK 292
Query: 429 HVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIF-NTTGIRTHKPKLKMLTS 487
VQ+ L LLPPDA+LVG SL+ DL ALKM+HPYVIDTS+++ G R KLK L
Sbjct: 293 DVQRQLKSLLPPDAVLVGHSLDLDLRALKMIHPYVIDTSLLYVREQGRRF---KLKFLAK 349
Query: 488 HFLGLDIQNQDG-GHCSKEDAIAALRLVKLKLSKG 521
LG DIQ + GH + EDA L L + L G
Sbjct: 350 AILGKDIQCPNRLGHDATEDARTTLELARYFLKYG 384
>UNIPROTKB|E2RFH4 [details] [associations]
symbol:LOC479820 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00630000089807
EMBL:AAEX03004472 Ensembl:ENSCAFT00000028470 Uniprot:E2RFH4
Length = 733
Score = 400 (145.9 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 97/205 (47%), Positives = 128/205 (62%)
Query: 319 TMLLLSALQMIEEDYPIPLRGELSAKFSKYINTKEVYAEVTPTSPLYGLDCEMCKTSNDQ 378
T LL+ +M + + PL+G + ++ TK +T SPL+GLDCEMC TS +
Sbjct: 144 TRCLLTKEEM--KTFHFPLQG--CPDCANFVPTK-CNGSITDNSPLFGLDCEMCVTSKGR 198
Query: 379 NELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVATRLEHVQKILSELL 438
ELTR++LV E + V + LVKP N I +YLT++SGIT+ +L PV TRL+ VQ+ L LL
Sbjct: 199 -ELTRISLVAEGGSCVMDELVKPDNKILDYLTSFSGITKKILNPVTTRLKDVQRQLKSLL 257
Query: 439 PPDAILVGQSLNCDLHALKMMHPYVIDTSVIF-NTTGIRTHKPKLKMLTSHFLGLDIQNQ 497
PPDA+LVG SL+ DL ALKM+HPYVIDTS+++ G R KLK L LG DIQ
Sbjct: 258 PPDAVLVGHSLDLDLRALKMIHPYVIDTSLLYVREQGRRF---KLKFLAKAILGKDIQCP 314
Query: 498 DG-GHCSKEDAIAALRLVKLKLSKG 521
+ GH + EDA L L + L G
Sbjct: 315 NRLGHDATEDARTTLELARYFLKYG 339
>UNIPROTKB|Q96IC2 [details] [associations]
symbol:44M2.3 "Putative RNA exonuclease NEF-sp"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 EMBL:AC004381
GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:CH471228 HOVERGEN:HBG101031 OMA:KMIHPYV
EMBL:AF332193 EMBL:AL136763 EMBL:AK057254 EMBL:AK314458
EMBL:BC007646 EMBL:BC068503 EMBL:AL162035 IPI:IPI00021754
IPI:IPI00307029 PIR:T47187 RefSeq:NP_001138396.1
RefSeq:NP_001185982.1 RefSeq:NP_112203.2 UniGene:Hs.177926
ProteinModelPortal:Q96IC2 SMR:Q96IC2 IntAct:Q96IC2
PhosphoSite:Q96IC2 DMDM:74760869 PaxDb:Q96IC2 PRIDE:Q96IC2
DNASU:81691 GeneID:81691 KEGG:hsa:81691 UCSC:uc002dhv.3
UCSC:uc002dhx.3 GeneCards:GC16P020817 HPA:HPA040755 HPA:HPA040868
neXtProt:NX_Q96IC2 InParanoid:Q96IC2 OrthoDB:EOG44F69Z
PhylomeDB:Q96IC2 GenomeRNAi:81691 NextBio:72040 Bgee:Q96IC2
Genevestigator:Q96IC2 Uniprot:Q96IC2
Length = 774
Score = 388 (141.6 bits), Expect = 4.2e-35, P = 4.2e-35
Identities = 96/205 (46%), Positives = 125/205 (60%)
Query: 319 TMLLLSALQMIEEDYPIPLRGELSAKFSKYINTKEVYAEVTPTSPLYGLDCEMCKTSNDQ 378
T LL+ +M + PL+G + ++ TK + SPL+GLDCEMC TS +
Sbjct: 188 TRCLLTKEEM--RTFHFPLQGFPDCE--NFLLTK-CNGSIADNSPLFGLDCEMCLTSKGR 242
Query: 379 NELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVATRLEHVQKILSELL 438
ELTR++LV E V + LVKP N I +YLT++SGIT+ +L PV T+L+ VQ+ L LL
Sbjct: 243 -ELTRISLVAEGGCCVMDELVKPENKILDYLTSFSGITKKILNPVTTKLKDVQRQLKALL 301
Query: 439 PPDAILVGQSLNCDLHALKMMHPYVIDTSVIF-NTTGIRTHKPKLKMLTSHFLGLDIQNQ 497
PPDA+LVG SL+ DL ALKM+HPYVIDTS+++ G R KLK L LG DIQ
Sbjct: 302 PPDAVLVGHSLDLDLRALKMIHPYVIDTSLLYVREQGRRF---KLKFLAKVILGKDIQCP 358
Query: 498 DG-GHCSKEDAIAALRLVKLKLSKG 521
D GH + EDA L L + L G
Sbjct: 359 DRLGHDATEDARTILELARYFLKHG 383
>UNIPROTKB|E1BR93 [details] [associations]
symbol:LOC427001 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00630000089807
EMBL:AADN02064630 EMBL:AADN02064631 EMBL:AADN02064632
EMBL:AADN02064633 EMBL:AADN02064634 IPI:IPI00915205
ProteinModelPortal:E1BR93 Ensembl:ENSGALT00000039112
ArrayExpress:E1BR93 Uniprot:E1BR93
Length = 755
Score = 386 (140.9 bits), Expect = 6.4e-35, P = 6.4e-35
Identities = 94/204 (46%), Positives = 123/204 (60%)
Query: 319 TMLLLSALQMIEEDYPIPLRGELSAKFSKYINTKEVYAEVTPTSPLYGLDCEMCKTSNDQ 378
T L++ ++ + DYP +R K Y+ T E + T +SPL+GLDCEMC T+
Sbjct: 182 TSYTLTSEELKKNDYP--MRDSPGCK--GYMYT-ECDLQRTDSSPLFGLDCEMCLTARG- 235
Query: 379 NELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVATRLEHVQKILSELL 438
NE+ RV+LVD + + LVKP + I NY T YSG+TR +L PV TRL +Q L ++L
Sbjct: 236 NEVVRVSLVDAEGQCLLNELVKPESVIVNYCTRYSGVTRKMLLPVKTRLPDIQTRLKKIL 295
Query: 439 PPDAILVGQSLNCDLHALKMMHPYVIDTSVIFNTTGIRTHKPKLKMLTSHFLGLDIQ-NQ 497
P DA+LVG SLN DL AL+M+HP VIDTS++F R K LK L LG +IQ Q
Sbjct: 296 PHDAVLVGHSLNADLQALQMIHPSVIDTSLLFARNEGRRFK--LKFLAKAVLGKEIQCEQ 353
Query: 498 DGGHCSKEDAIAALRLVKLKLSKG 521
GH EDA AAL L + + KG
Sbjct: 354 RLGHDPAEDARAALELAQFFIKKG 377
>UNIPROTKB|F1P5D1 [details] [associations]
symbol:LOC427001 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00630000089807
EMBL:AADN02064630 EMBL:AADN02064631 EMBL:AADN02064632
EMBL:AADN02064633 EMBL:AADN02064634 IPI:IPI00601052
Ensembl:ENSGALT00000003504 ArrayExpress:F1P5D1 Uniprot:F1P5D1
Length = 773
Score = 386 (140.9 bits), Expect = 6.9e-35, P = 6.9e-35
Identities = 94/204 (46%), Positives = 123/204 (60%)
Query: 319 TMLLLSALQMIEEDYPIPLRGELSAKFSKYINTKEVYAEVTPTSPLYGLDCEMCKTSNDQ 378
T L++ ++ + DYP +R K Y+ T E + T +SPL+GLDCEMC T+
Sbjct: 182 TSYTLTSEELKKNDYP--MRDSPGCK--GYMYT-ECDLQRTDSSPLFGLDCEMCLTARG- 235
Query: 379 NELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVATRLEHVQKILSELL 438
NE+ RV+LVD + + LVKP + I NY T YSG+TR +L PV TRL +Q L ++L
Sbjct: 236 NEVVRVSLVDAEGQCLLNELVKPESVIVNYCTRYSGVTRKMLLPVKTRLPDIQTRLKKIL 295
Query: 439 PPDAILVGQSLNCDLHALKMMHPYVIDTSVIFNTTGIRTHKPKLKMLTSHFLGLDIQ-NQ 497
P DA+LVG SLN DL AL+M+HP VIDTS++F R K LK L LG +IQ Q
Sbjct: 296 PHDAVLVGHSLNADLQALQMIHPSVIDTSLLFARNEGRRFK--LKFLAKAVLGKEIQCEQ 353
Query: 498 DGGHCSKEDAIAALRLVKLKLSKG 521
GH EDA AAL L + + KG
Sbjct: 354 RLGHDPAEDARAALELAQFFIKKG 377
>RGD|1305412 [details] [associations]
symbol:Exnef "exonuclease NEF-sp" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISO] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 RGD:1305412 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 HOGENOM:HOG000015091 HOVERGEN:HBG101031 OrthoDB:EOG44F69Z
EMBL:BC128775 IPI:IPI00565694 RefSeq:NP_001073174.1
UniGene:Rn.203990 ProteinModelPortal:A1A5R7 PhosphoSite:A1A5R7
PRIDE:A1A5R7 GeneID:309036 KEGG:rno:309036 UCSC:RGD:1305412
CTD:309036 InParanoid:A1A5R7 NextBio:660038 Genevestigator:A1A5R7
Uniprot:A1A5R7
Length = 754
Score = 376 (137.4 bits), Expect = 7.7e-34, P = 7.7e-34
Identities = 94/205 (45%), Positives = 129/205 (62%)
Query: 319 TMLLLSALQMIEEDYPIPLRGELSAKFSKYINTKEVYAE-VTPTSPLYGLDCEMCKTSND 377
T LL+ +M + + PL+G S +I K Y+ +T +SPL+GLDCE+C TS
Sbjct: 182 TRCLLTKEEM--KTFHFPLQG--SPNCENFILLK--YSGFITDSSPLFGLDCEVCLTSMG 235
Query: 378 QNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVATRLEHVQKILSEL 437
+ ELTR++LV E + + LVKP I +YLT++SGIT+ +L PV T+L+ VQK+L EL
Sbjct: 236 K-ELTRISLVAEGGYCLMDELVKPDFKILDYLTSFSGITKEILNPVTTKLKDVQKLLREL 294
Query: 438 LPPDAILVGQSLNCDLHALKMMHPYVIDTSVIFNTTGIRTHKPKLKMLTSHFLGLDIQNQ 497
LPPDA+LVG L+ DL LK++HPYVIDTS+++ G + + KL L LG DIQ
Sbjct: 295 LPPDAVLVGHCLDLDLRVLKIIHPYVIDTSLLY--IGKQGRRFKLTFLAKVILGKDIQCP 352
Query: 498 DG-GHCSKEDAIAALRLVKLKLSKG 521
+ GH EDA AL LV+ L G
Sbjct: 353 NKLGHDGIEDARTALELVQYFLKYG 377
>UNIPROTKB|F1M6V9 [details] [associations]
symbol:Exnef "Protein Exnef" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006055 InterPro:IPR012337
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
SMART:SM00479 Pfam:PF00929 RGD:1305412 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0004527 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00630000089807 IPI:IPI00565694
Ensembl:ENSRNOT00000019654 Uniprot:F1M6V9
Length = 754
Score = 376 (137.4 bits), Expect = 7.7e-34, P = 7.7e-34
Identities = 94/205 (45%), Positives = 129/205 (62%)
Query: 319 TMLLLSALQMIEEDYPIPLRGELSAKFSKYINTKEVYAE-VTPTSPLYGLDCEMCKTSND 377
T LL+ +M + + PL+G S +I K Y+ +T +SPL+GLDCE+C TS
Sbjct: 182 TRCLLTKEEM--KTFHFPLQG--SPNCENFILLK--YSGFITDSSPLFGLDCEVCLTSMG 235
Query: 378 QNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVATRLEHVQKILSEL 437
+ ELTR++LV E + + LVKP I +YLT++SGIT+ +L PV T+L+ VQK+L EL
Sbjct: 236 K-ELTRISLVAEGGYCLMDELVKPDFKILDYLTSFSGITKEILNPVTTKLKDVQKLLREL 294
Query: 438 LPPDAILVGQSLNCDLHALKMMHPYVIDTSVIFNTTGIRTHKPKLKMLTSHFLGLDIQNQ 497
LPPDA+LVG L+ DL LK++HPYVIDTS+++ G + + KL L LG DIQ
Sbjct: 295 LPPDAVLVGHCLDLDLRVLKIIHPYVIDTSLLY--IGKQGRRFKLTFLAKVILGKDIQCP 352
Query: 498 DG-GHCSKEDAIAALRLVKLKLSKG 521
+ GH EDA AL LV+ L G
Sbjct: 353 NKLGHDGIEDARTALELVQYFLKYG 377
>UNIPROTKB|G4MYV4 [details] [associations]
symbol:MGG_15523 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:CM001232
RefSeq:XP_003713422.1 ProteinModelPortal:G4MYV4
EnsemblFungi:MGG_15523T0 GeneID:12987077 KEGG:mgr:MGG_15523
Uniprot:G4MYV4
Length = 720
Score = 370 (135.3 bits), Expect = 3.0e-33, P = 3.0e-33
Identities = 80/169 (47%), Positives = 106/169 (62%)
Query: 358 VTPTSPLYGLDCEMCKT--SNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGI 415
+T ++ +DCEMC+T +N LTRVT++ VV + LVKP PI +YLT +SGI
Sbjct: 307 ITAGREIFAIDCEMCRTGPTNHDLSLTRVTILSWDGEVVMDELVKPSLPILDYLTQFSGI 366
Query: 416 TRALLAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIFNTTGI 475
T+ +L PV T L +QK L ELL P +ILVG SL+ D+ AL+M HP+V+DTS++F
Sbjct: 367 TKEMLEPVTTTLPDIQKRLLELLTPRSILVGHSLDSDMKALQMAHPFVVDTSILFPNPSS 426
Query: 476 RTHKPKLKMLTSHFLGLDIQNQDG---GHCSKEDAIAALRLVKLKLSKG 521
K LK L S +LG +Q +G GH S EDA+ AL LVK K KG
Sbjct: 427 PNGKHSLKHLASKYLGRQVQKDEGSLKGHDSYEDALTALDLVKKKCEKG 475
Score = 144 (55.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 32/68 (47%), Positives = 40/68 (58%)
Query: 53 QMMHPYVIDTSVIFNTTGIRTHKPKLKMLTSHFLGLDIQNQDG---GHCSKEDAIAALRL 109
QM HP+V+DTS++F K LK L S +LG +Q +G GH S EDA+ AL L
Sbjct: 408 QMAHPFVVDTSILFPNPSSPNGKHSLKHLASKYLGRQVQKDEGSLKGHDSYEDALTALDL 467
Query: 110 VKLKLSKG 117
VK K KG
Sbjct: 468 VKKKCEKG 475
Score = 46 (21.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 417 RALL-APVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIFNTTGI 475
R LL VAT + + +I + L PP A LV S D ++ + +NT G+
Sbjct: 628 RCLLEVAVATVTQRIGRIYAAL-PPCAALVVFSGTGDPREMERLRAQQAQYKAEYNTPGM 686
Query: 476 R 476
+
Sbjct: 687 K 687
>POMBASE|SPAC637.09 [details] [associations]
symbol:SPAC637.09 "ribonuclease H70 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000467
"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006396
"RNA processing" evidence=ISO] [GO:0008408 "3'-5' exonuclease
activity" evidence=ISO] [GO:0034415 "tRNA 3'-trailer cleavage,
exonucleolytic" evidence=ISO] [GO:0034476 "U5 snRNA 3'-end
processing" evidence=ISO] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 PomBase:SPAC637.09 Pfam:PF00929 GO:GO:0005634
EMBL:CU329670 GO:GO:0003676 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0000467 GO:GO:0034476
OrthoDB:EOG4MKRQF GO:GO:0034415 PIR:T39001 RefSeq:NP_594627.2
STRING:O94443 EnsemblFungi:SPAC637.09.1 GeneID:2543505
HOGENOM:HOG000165759 NextBio:20804515 Uniprot:O94443
Length = 631
Score = 365 (133.5 bits), Expect = 1.9e-32, P = 1.9e-32
Identities = 84/210 (40%), Positives = 125/210 (59%)
Query: 322 LLSALQMIEEDYPI-P--LRGELSAKFSKYINTKEVYAEVTPTSP-LYGLDCEMCKTSND 377
L+S IE++YP+ P ++GE + S ++ + + P +P + +DCEM +T N
Sbjct: 231 LMSYESFIEDEYPLHPTVMKGEEVTQPSGWVASAGDFHS-PPINPKILAIDCEMVRTENG 289
Query: 378 QNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVATRLEHVQKILSEL 437
E+ RVT+VD + V+Y+ VKP +P+T+Y+T YSGIT L V T L VQ L +
Sbjct: 290 L-EIARVTIVDMKSEVIYDEFVKPESPVTDYVTQYSGITEEKLRNVTTVLSDVQSYLKKT 348
Query: 438 LPPDAILVGQSLNCDLHALKMMHPYVIDTSVIFNTTGIRTHKPKLKMLTSHFLGLDIQNQ 497
+ + +L+G SLN DL+ LK HP++IDT+ I+N T KP LK L + +L +IQ
Sbjct: 349 VDNNTVLLGHSLNSDLNCLKFTHPHIIDTANIYNHTRGPPSKPSLKWLATKWLRREIQKA 408
Query: 498 DG-GHCSKEDAIAALRLVKLKLSKGDLIGL 526
GH S EDA+A + L+KLK+ G GL
Sbjct: 409 GALGHDSAEDALACVDLLKLKVKNGPAFGL 438
Score = 124 (48.7 bits), Expect = 0.00024, P = 0.00024
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 56 HPYVIDTSVIFNTTGIRTHKPKLKMLTSHFLGLDIQNQDG-GHCSKEDAIAALRLVKLKL 114
HP++IDT+ I+N T KP LK L + +L +IQ GH S EDA+A + L+KLK+
Sbjct: 371 HPHIIDTANIYNHTRGPPSKPSLKWLATKWLRREIQKAGALGHDSAEDALACVDLLKLKV 430
Query: 115 SKG 117
G
Sbjct: 431 KNG 433
>UNIPROTKB|F1RPB4 [details] [associations]
symbol:F1RPB4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00630000089807
OMA:KMIHPYV EMBL:FP016068 EMBL:CU464004 Ensembl:ENSSSCT00000008605
Uniprot:F1RPB4
Length = 790
Score = 350 (128.3 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 95/207 (45%), Positives = 121/207 (58%)
Query: 319 TMLLLSALQMIEEDYPIPLRGELSAKFSKYINTKEVYAEVTPTSPLYGLDCEMCKTSNDQ 378
T LL+ +M + Y PL+G K K + +V E S L GLD C TS +
Sbjct: 190 TRCLLTKEEM--KAYHFPLQGFF--KSEKIVAKSKVTGENFTHSHLSGLDNNRCLTSKGR 245
Query: 379 NELTRVTLVDEQENVVYESLVKPYNPITNYLTA--YSGITRALLAPVATRLEHVQKILSE 436
ELTR++LV E V + LVKP N I +YLT+ +SGIT+ +L PV T+L+ VQ+ L
Sbjct: 246 -ELTRISLVAEGGCCVMDELVKPDNKIVDYLTSESFSGITKKILNPVTTKLKDVQRQLKA 304
Query: 437 LLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIF-NTTGIRTHKPKLKMLTSHFLGLDIQ 495
LLPPDA+LVG SL+ DL ALKM+HPYVIDTS+++ G R KLK L LG DIQ
Sbjct: 305 LLPPDAVLVGHSLDLDLRALKMIHPYVIDTSLLYVREQGRRF---KLKFLAKTILGKDIQ 361
Query: 496 NQDG-GHCSKEDAIAALRLVKLKLSKG 521
D GH + EDA L L + L G
Sbjct: 362 CPDRLGHDAIEDARTTLELARYFLKYG 388
Score = 54 (24.1 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 21/72 (29%), Positives = 33/72 (45%)
Query: 132 GFSLNDYLMFAHELPGLRDRFV-KMEVIPPSSYTTSLVHELVMSSRHMEAQDMTPSKETS 190
G S + F E LR F K + PPSS + +++ R + D++ + E S
Sbjct: 105 GMSQLHFYRFYLEFGFLRKAFRHKFRLPPPSS---DFLADIIGLQRKKKIGDLSKTMEGS 161
Query: 191 LPSNVTNSTHSP 202
LPS + + SP
Sbjct: 162 LPSVSSKVSISP 173
>ASPGD|ASPL0000067196 [details] [associations]
symbol:AN7566 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0003676 GO:GO:0005622 EMBL:AACD01000129 EMBL:BN001304
GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 OrthoDB:EOG4MKRQF HOGENOM:HOG000165759 RefSeq:XP_680835.1
ProteinModelPortal:Q5AVW4 EnsemblFungi:CADANIAT00000673
GeneID:2869567 KEGG:ani:AN7566.2 OMA:WARMREL Uniprot:Q5AVW4
Length = 723
Score = 347 (127.2 bits), Expect = 2.6e-29, P = 2.6e-29
Identities = 75/168 (44%), Positives = 102/168 (60%)
Query: 358 VTPTSPLYGLDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITR 417
+T + LDCEMC T +ELTR++LV VV + LVKP P+ +YLT +SGIT+
Sbjct: 339 MTAGRDVLALDCEMCITEGGSSELTRISLVRWDGEVVLDELVKPRLPVIDYLTRFSGITK 398
Query: 418 ALLAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIFNTTGIRT 477
+L PV T L +Q+ L ++ P +ILVG SLN DL+ALK+ HP+++DT ++
Sbjct: 399 EMLDPVTTTLRDIQQKLLNIITPRSILVGHSLNSDLNALKLTHPFIVDTVFLYPHPRGPP 458
Query: 478 HKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKLKLSKGDLIG 525
+ LK LT +LG +IQ GH S EDA A L LVK K KG+ G
Sbjct: 459 LRASLKWLTQKYLGKEIQKGTTGHDSIEDARAVLELVKQKCEKGEQWG 506
Score = 120 (47.3 bits), Expect = 0.00080, P = 0.00080
Identities = 28/73 (38%), Positives = 39/73 (53%)
Query: 53 QMMHPYVIDTSVIFNTTGIRTHKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKL 112
++ HP+++DT ++ + LK LT +LG +IQ GH S EDA A L LVK
Sbjct: 438 KLTHPFIVDTVFLYPHPRGPPLRASLKWLTQKYLGKEIQKGTTGHDSIEDARAVLELVKQ 497
Query: 113 KLSKGDLCSTKPA 125
K KG+ T A
Sbjct: 498 KCEKGEQWGTSDA 510
>CGD|CAL0006149 [details] [associations]
symbol:orf19.6195 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0000175 "3'-5'-exoribonuclease
activity" evidence=IEA] [GO:0034415 "tRNA 3'-trailer cleavage,
exonucleolytic" evidence=IEA] [GO:0034476 "U5 snRNA 3'-end
processing" evidence=IEA] [GO:0000467 "exonucleolytic trimming to
generate mature 3'-end of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0002107 "generation of mature 3'-end of 5S rRNA generated by
RNA polymerase III" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 CGD:CAL0006149 Pfam:PF00929
GO:GO:0003676 GO:GO:0005622 GO:GO:0004527 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AACQ01000038
EMBL:AACQ01000037 KO:K14570 RefSeq:XP_718702.1 RefSeq:XP_718786.1
ProteinModelPortal:Q5AAW5 GeneID:3639488 GeneID:3639626
KEGG:cal:CaO19.13575 KEGG:cal:CaO19.6195 Uniprot:Q5AAW5
Length = 744
Score = 342 (125.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 99/307 (32%), Positives = 147/307 (47%)
Query: 230 QNTKSQSQNIESAFQNTKSQSQYIESAFQNTKSQPQNIQLASQSTKS-KSEIPLNDESKS 288
Q ++ ++ ++ Q++K +S+ + A N K Q + T KS P + +S
Sbjct: 200 QLEENLAETADNGLQSSKEKSKQ-QCAISNLKRIDQLSFIFDNFTNFIKSSSPGSKDSIF 258
Query: 289 ATPQNTESQXXXXXXXXXXXXXXXXDKFPRTMLLLSALQMIEEDYPIPLRGEL--SAK-- 344
++ Q + K LLL+ Q+ +YP L + K
Sbjct: 259 SSLQTLLNVPLTKNEKNSLLRKSKATKITIKDLLLTEQQLKTYNYPTTLVDSTWKATKDL 318
Query: 345 FSKYINTKEVYAEVTPTSPLYGLDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYNP 404
++ N E T S +Y LDCE CK Q LTR++L+D + VV + LVKP
Sbjct: 319 YNTDSNNNEKSDSETRKSRIYALDCEFCKAGAKQ-VLTRISLLDFEAKVVMDELVKPKEE 377
Query: 405 ITNYLTAYSGITRALLAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVI 464
IT+Y+T YSGIT LL V T +E +Q + + IL+G SL DL+ +K+ H ++
Sbjct: 378 ITDYVTKYSGITEELLRDVTTTIEDIQNLFVNTVSQQDILIGHSLESDLNVMKIKHDNIV 437
Query: 465 DTSVIFNTTGIRTHKPKLKMLTSHFLGLDIQNQDG---GHCSKEDAIAALRLVKLKLSKG 521
DTS+I+ KP LK L L IQ +G GH S EDA A L LVKLK+ +G
Sbjct: 438 DTSIIYEHNRGPPSKPSLKSLAEKHLNRQIQAGEGQGLGHSSIEDAKACLDLVKLKIIEG 497
Query: 522 DLIGLKL 528
L G+ +
Sbjct: 498 KLFGVNV 504
>TAIR|locus:2145244 [details] [associations]
symbol:AT5G25800 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR006055 InterPro:IPR012337
InterPro:IPR017849 SMART:SM00479 Pfam:PF00929 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003676 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
Gene3D:3.40.720.10 EMBL:AC005405 KO:K14570 EMBL:AY128370
IPI:IPI00537859 IPI:IPI00915141 RefSeq:NP_197952.2 UniGene:At.30891
ProteinModelPortal:Q8L7M4 SMR:Q8L7M4 PaxDb:Q8L7M4 PRIDE:Q8L7M4
EnsemblPlants:AT5G25800.1 GeneID:832649 KEGG:ath:AT5G25800
TAIR:At5g25800 HOGENOM:HOG000244006 OMA:KETILVG PhylomeDB:Q8L7M4
ProtClustDB:CLSN2681069 Genevestigator:Q8L7M4 Uniprot:Q8L7M4
Length = 567
Score = 336 (123.3 bits), Expect = 2.6e-28, P = 2.6e-28
Identities = 86/207 (41%), Positives = 116/207 (56%)
Query: 329 IEEDYPIPLRG-ELSAKFSKYINTKEVYAEVTPTSP---------LYGLDCEMCKTSNDQ 378
+ +D P P+ LS K + E+TPT P + LDCEMC T
Sbjct: 170 LTKDIPFPVSYYTLSQKEMEQNGYTFEKLELTPTLPAPSGSCPPEIVALDCEMCITKEGL 229
Query: 379 NELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVATRLEHVQKILSELL 438
ELTRVTLVD Q V+ + LV P NPIT+Y T YSGIT ++ V T L+ +Q+ +L+
Sbjct: 230 -ELTRVTLVDIQGQVLLDKLVMPTNPITDYNTRYSGITAVMMEGVTTTLKDIQEEFLKLV 288
Query: 439 PPDAILVGQSLNCDLHALKMMHPYVIDTSVIFNTTGIRTHKPKLKMLTSHFLGLDIQNQD 498
+ ILVG SL DL +LK+ H VIDT+V++ R++K KL++L FL +IQ +
Sbjct: 289 FKETILVGHSLENDLLSLKISHNLVIDTAVLYKHPHGRSYKTKLRILAKKFLAREIQESE 348
Query: 499 GGHCSKEDAIAALRLVKLKLSKGDLIG 525
GH S EDA AA+ L LK+ G G
Sbjct: 349 SGHDSAEDAKAAMDLALLKIKHGPDFG 375
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 53 QMMHPYVIDTSVIFNTTGIRTHKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKL 112
++ H VIDT+V++ R++K KL++L FL +IQ + GH S EDA AA+ L L
Sbjct: 307 KISHNLVIDTAVLYKHPHGRSYKTKLRILAKKFLAREIQESESGHDSAEDAKAAMDLALL 366
Query: 113 KLSKG 117
K+ G
Sbjct: 367 KIKHG 371
>SGD|S000003508 [details] [associations]
symbol:RNH70 "3'-5' exoribonuclease" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0034415 "tRNA 3'-trailer cleavage, exonucleolytic"
evidence=IGI;IMP] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=IMP] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0034476 "U5 snRNA 3'-end processing"
evidence=IGI] [GO:0000467 "exonucleolytic trimming to generate
mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IGI] [GO:0002107
"generation of mature 3'-end of 5S rRNA generated by RNA polymerase
III" evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 SGD:S000003508 Pfam:PF00929
GO:GO:0005634 EMBL:BK006941 GO:GO:0003723 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0000175 EMBL:Z73062
GO:GO:0000467 EMBL:X84098 KO:K14570 GO:GO:0034476
GeneTree:ENSGT00630000089807 EMBL:Z73061 PIR:S64609
RefSeq:NP_011792.1 ProteinModelPortal:P53331 SMR:P53331
DIP:DIP-5564N IntAct:P53331 MINT:MINT-551078 STRING:P53331
PaxDb:P53331 PeptideAtlas:P53331 EnsemblFungi:YGR276C GeneID:853193
KEGG:sce:YGR276C CYGD:YGR276c HOGENOM:HOG000065977
OrthoDB:EOG4MKRQF NextBio:973350 Genevestigator:P53331
GermOnline:YGR276C GO:GO:0002107 GO:GO:0034415 Uniprot:P53331
Length = 553
Score = 332 (121.9 bits), Expect = 7.0e-28, P = 7.0e-28
Identities = 84/207 (40%), Positives = 116/207 (56%)
Query: 321 LLLSALQMIEEDYPIPLRGELSAKFSKYINTKEVYAEVTPTSPLYGLDCEMCKTSNDQNE 380
L+LS Q++ DYP+ G+ + + ++ T + S ++ LDCEMC S
Sbjct: 187 LVLSEQQLVANDYPLD-SGDTNFD-TDWVQTVDF---THGGSHIFALDCEMC-LSEQGLV 240
Query: 381 LTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVATR-LEHVQKILSELLP 439
LTR++LV+ V+YE LVKP PI +YLT YSGIT L A + L VQK L +++
Sbjct: 241 LTRISLVNFDNEVIYEELVKPDVPIVDYLTRYSGITEEKLTVGAKKTLREVQKDLLKIIS 300
Query: 440 PDAILVGQSLNCDLHALKMMHPYVIDTSVIFNTTGIRTHKPKLKMLTSHFLGLDIQNQDG 499
IL+G SL DL +K+ HP V+DT++I++ KP LK L+ FL IQN G
Sbjct: 301 RSDILIGHSLQNDLKVMKLKHPLVVDTAIIYHHKAGDPFKPSLKYLSETFLNKSIQN--G 358
Query: 500 GHCSKEDAIAALRLVKLKLSKGDLIGL 526
H S EDA A L L KLK+ G G+
Sbjct: 359 EHDSVEDARACLELTKLKILNGLAFGI 385
Score = 127 (49.8 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 35/98 (35%), Positives = 51/98 (52%)
Query: 22 KMNARQIKR-LENKKRKMDALVEIKTLNEAD-KQMMHPYVIDTSVIFNTTGIRTHKPKLK 79
K R++++ L + D L+ N+ ++ HP V+DT++I++ KP LK
Sbjct: 285 KKTLREVQKDLLKIISRSDILIGHSLQNDLKVMKLKHPLVVDTAIIYHHKAGDPFKPSLK 344
Query: 80 MLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKLKLSKG 117
L+ FL IQN G H S EDA A L L KLK+ G
Sbjct: 345 YLSETFLNKSIQN--GEHDSVEDARACLELTKLKILNG 380
>DICTYBASE|DDB_G0291590 [details] [associations]
symbol:rexo1 "RNA exonuclease 1" species:44689
"Dictyostelium discoideum" [GO:0005622 "intracellular"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016070 "RNA
metabolic process" evidence=IC] [GO:0008408 "3'-5' exonuclease
activity" evidence=ISS] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 dictyBase:DDB_G0291590 Pfam:PF00929 EMBL:AAFI02000177
GenomeReviews:CM000155_GR GO:GO:0003676 GO:GO:0005622
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0016070
GO:GO:0008408 KO:K14570 RefSeq:XP_635319.1
ProteinModelPortal:Q54EC1 EnsemblProtists:DDB0305007 GeneID:8628263
KEGG:ddi:DDB_G0291590 InParanoid:Q54EC1 OMA:EMLAIDC Uniprot:Q54EC1
Length = 694
Score = 324 (119.1 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 75/168 (44%), Positives = 103/168 (61%)
Query: 364 LYGLDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPV 423
+ +DCEMC+T Q ELTR+++V+EQ+ VV LV P PI +YLT YSGIT L V
Sbjct: 328 MLAIDCEMCRTEGGQLELTRISIVNEQKKVVLNELVLPEKPIIDYLTQYSGITADTLKNV 387
Query: 424 ATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIFNTTGIRTHKPKLK 483
RL + L +L+ D +L+G SL DL A+K +H +IDTS+++ TG + K LK
Sbjct: 388 TNRLSDIHAKLEKLVGVDTVLIGHSLENDLKAMKFIHRKIIDTSILY-PTG-SSGKFSLK 445
Query: 484 MLTSHFLGLDIQN-QDG--GHCSKEDAIAALRLVKLKLSKGDLIGLKL 528
LT +L IQ+ + G GH S EDA AA+ L +LK+ KG G +L
Sbjct: 446 YLTKKYLNRIIQSTKHGKLGHDSIEDARAAMDLAQLKIQKGKSFGTRL 493
Score = 120 (47.3 bits), Expect = 0.00076, P = 0.00076
Identities = 66/240 (27%), Positives = 110/240 (45%)
Query: 30 RLENKKRKMDALVEIKTLN-----EADKQMM---HPYVIDTSVIFNTTGIRTHKPKLKML 81
RL + K++ LV + T+ E D + M H +IDTS+++ TG + K LK L
Sbjct: 390 RLSDIHAKLEKLVGVDTVLIGHSLENDLKAMKFIHRKIIDTSILY-PTG-SSGKFSLKYL 447
Query: 82 TSHFLGLDIQN-QDG--GHCSKEDAIAALRLVKLKLSKGDLCSTKPAHHTVNLGFSLNDY 138
T +L IQ+ + G GH S EDA AA+ L +LK+ KG T+ A NL +N +
Sbjct: 448 TKKYLNRIIQSTKHGKLGHDSIEDARAAMDLAQLKIQKGKSFGTRLASME-NLFDKINKH 506
Query: 139 LMFAHELPGLRD-RFVKMEVIP--PSSYTTSLVHELVMSSRHMEAQDMTPSKETSLPSNV 195
+ + L D + +V+ ++ +++ S + + D+ S+ TSL
Sbjct: 507 EKKSSFIDRLEDIKTFTSQVVSCFNCENDNEVIEKIIKQSSNSSSSDLIFSQLTSL---- 562
Query: 196 TNSTHSPSQTIKSAFPIGTQPVRSANTESLSATSQNTKSQSQNIESAFQNTKSQSQYIES 255
S H S K F I T P + T + + T+ + + I + T+ + + I S
Sbjct: 563 --SDHFKSLLPKQ-FSI-TNPEENKLTTTTTTTTTTITNPIETIIDSPLLTEKEIKEIHS 618
Score = 49 (22.3 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 19/83 (22%), Positives = 35/83 (42%)
Query: 217 VRSANTESLSATSQNTKSQSQNIESAFQNTKSQSQYIE--SAFQNTKSQPQNIQLASQST 274
+++ E+ S N + + N + QN K ++ I + FQ S + S +
Sbjct: 4 LKNKKIENSSIEVDNNNNNNNNNNNKNQNNKKRTLEISYTNKFQFLDSSDSGGE--SDTD 61
Query: 275 KSKSEIPLNDESKSATPQNTESQ 297
K + + L + KS+ N SQ
Sbjct: 62 KEMNRVSLKKKKKSSPISNKLSQ 84
>FB|FBgn0039544 [details] [associations]
symbol:CG12877 species:7227 "Drosophila melanogaster"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:AE014297 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 GeneTree:ENSGT00630000089807 EMBL:BT133134
RefSeq:NP_001034073.1 UniGene:Dm.14943 SMR:Q2PDP6
EnsemblMetazoa:FBtr0100446 GeneID:43333 KEGG:dme:Dmel_CG12877
UCSC:CG12877-RC FlyBase:FBgn0039544 OMA:GGWETSY OrthoDB:EOG4FTTFN
GenomeRNAi:43333 NextBio:833402 Uniprot:Q2PDP6
Length = 991
Score = 311 (114.5 bits), Expect = 2.1e-27, Sum P(2) = 2.1e-27
Identities = 75/176 (42%), Positives = 99/176 (56%)
Query: 344 KFSKYINTKEVYAEVTPTSP-LYGLDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPY 402
K + ++ T E E PT +Y LDCEMC T++ ELTRVT+VD VY++LVKP
Sbjct: 812 KLTCFVKTIERGEEFVPTKKDIYALDCEMCYTTHGI-ELTRVTVVDINGRSVYDALVKPD 870
Query: 403 NPITNYLTAYSGITRALLAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPY 462
N I +Y T YSGIT A+L+ + VQ +L + +LVG SL DL ALK++H
Sbjct: 871 NQIVDYNTTYSGITEAMLSNETRTIRDVQAVLMSMFHAKTVLVGHSLESDLKALKLIHDV 930
Query: 463 VIDTSVIFNTTGIRTHKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKLKL 518
V+DTSV+F K LK L L IQ + GH S EDA ++L+K L
Sbjct: 931 VVDTSVLFPHKMGPPKKRALKTLCIENLKRIIQESEAGHDSAEDAEVCIQLIKYYL 986
Score = 70 (29.7 bits), Expect = 2.1e-27, Sum P(2) = 2.1e-27
Identities = 26/100 (26%), Positives = 51/100 (51%)
Query: 198 STHSPSQTIKSAFPIGTQPVRSANTESLSATSQNTKSQSQNIESAFQNTKSQSQYIESAF 257
S+HS + K T S+ +S S++S + KS S + ++ KS S +S+
Sbjct: 235 SSHSDKERSKER---NTSSSSSSKHKSSSSSSSSKKSSSSD---KHRDDKSSSSRHKSSS 288
Query: 258 QNTKSQPQNIQLASQSTKSKSEIPLNDESKSATPQNTESQ 297
++ S+ + + +S S++SK++ + SKSA +E +
Sbjct: 289 SSSSSKSHHHKSSSSSSRSKTKRS-SSSSKSAGTSKSEPE 327
Score = 67 (28.6 bits), Expect = 4.3e-27, Sum P(2) = 4.3e-27
Identities = 27/108 (25%), Positives = 56/108 (51%)
Query: 187 KETSLPSNVTNSTHSPSQTIKSAFPIGTQPVRSANTESLSATSQNTKSQSQNIESAFQNT 246
KE S N ++S+ S ++ S+ S+ S S ++ KS S +S+ ++
Sbjct: 240 KERSKERNTSSSSSSKHKSSSSS--------SSSKKSSSSDKHRDDKSSSSRHKSSSSSS 291
Query: 247 KSQSQYIESAFQNTKSQPQNIQLASQST-KSKSEIPLNDESKSA--TP 291
S+S + +S+ +++S+ + +S+S SKSE + ++++A TP
Sbjct: 292 SSKSHHHKSSSSSSRSKTKRSSSSSKSAGTSKSEPEADKDTEAAVLTP 339
Score = 58 (25.5 bits), Expect = 3.7e-26, Sum P(2) = 3.7e-26
Identities = 23/113 (20%), Positives = 61/113 (53%)
Query: 175 SRHMEAQDMTPSKETSLPSNVTNSTHSPSQTIKSAFPIGTQPVRSANTESLSATSQNTKS 234
S H + + +S S+ S+ S S + KS+ + +S+++ S++S ++ S
Sbjct: 235 SSHSDKERSKERNTSSSSSSKHKSSSSSSSSKKSSSSDKHRDDKSSSSRHKSSSSSSS-S 293
Query: 235 QSQNIESAFQNTKSQSQYIESAFQN---TKSQPQNIQLASQSTKSKSEIPLND 284
+S + +S+ +++S+++ S+ ++ +KS+P+ + + + +E P++D
Sbjct: 294 KSHHHKSSSSSSRSKTKRSSSSSKSAGTSKSEPEADKDTEAAVLTPAE-PMDD 345
Score = 56 (24.8 bits), Expect = 6.1e-26, Sum P(2) = 6.1e-26
Identities = 19/83 (22%), Positives = 35/83 (42%)
Query: 174 SSRHMEAQDMTPSKE---TSLPSNVTNSTHSPSQTIKSAFPIGTQPVRSANTESLSATSQ 230
SSRH + + SK S S+ + T S + KSA ++P +TE+ T
Sbjct: 281 SSRHKSSSSSSSSKSHHHKSSSSSSRSKTKRSSSSSKSAGTSKSEPEADKDTEAAVLTPA 340
Query: 231 NTKSQSQNIESAFQNTKSQSQYI 253
+++ F+ S+ + +
Sbjct: 341 EPMDDLDDMDFDFEADTSEGEIV 363
Score = 40 (19.1 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 21/145 (14%), Positives = 48/145 (33%)
Query: 175 SRHMEAQDMTPSKETSLPSNVTNSTHSPSQTIKSAFPIGTQPVRSANTESLSATSQNTKS 234
+R +D PSKE + IK + R + E + +
Sbjct: 169 ARDSHEKDRKPSKERERDIEKKKIRELKREKIKDRDRDRDRD-REKDKEKSKERDREKEK 227
Query: 235 QSQNIESAFQNTKSQSQYIESAFQNTKSQPQNIQLASQSTKSKSEIPLNDESKSATPQNT 294
++ + + K +S+ ++ ++ + +S S S+ +D+S S+ +++
Sbjct: 228 NDRDKRKSSHSDKERSKERNTSSSSSSKHKSSSSSSSSKKSSSSDKHRDDKSSSSRHKSS 287
Query: 295 ESQXXXXXXXXXXXXXXXXDKFPRT 319
S K R+
Sbjct: 288 SSSSSSKSHHHKSSSSSSRSKTKRS 312
>RGD|1564472 [details] [associations]
symbol:RGD1564472 "similar to Transcription elongation factor B
polypeptide 3 binding protein 1" species:10116 "Rattus norvegicus"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 RGD:1564472 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00630000089807
IPI:IPI00767432 Ensembl:ENSRNOT00000049320 Uniprot:F1LWS9
Length = 465
Score = 313 (115.2 bits), Expect = 6.8e-27, Sum P(2) = 6.8e-27
Identities = 71/157 (45%), Positives = 95/157 (60%)
Query: 364 LYGLDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPV 423
+Y LDCEM T++ ELTRVT+VD ++V+Y++ VKP N I +Y T +SG+T LA
Sbjct: 304 IYALDCEMSYTTHGL-ELTRVTVVDTDQHVIYDTFVKPDNEIVDYNTMFSGVTETDLANT 362
Query: 424 ATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIFNTTGIRTHKPKLK 483
RL VQ +L L + IL+G SL DL ALK +H V+DTSV+F K L+
Sbjct: 363 RVRLCDVQAVLLSLFSTETILIGHSLESDLLALKFIHGTVVDTSVLFPHHRGPPFKRSLR 422
Query: 484 MLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKLKLSK 520
LTS +L IQ GGH S EDA A ++LV K+ +
Sbjct: 423 GLTSQYLNRIIQTDSGGHSSIEDATACMQLVTWKIQE 459
Score = 41 (19.5 bits), Expect = 6.8e-27, Sum P(2) = 6.8e-27
Identities = 16/53 (30%), Positives = 22/53 (41%)
Query: 138 YLMFAHELPGLRDRFV-KMEVIPPSSYTTSLVHE-LVMSSRHMEAQDMTPSKE 188
Y + + P L F K+ V Y E L SS H+EA + S+E
Sbjct: 80 YTLIGVKKPVLTKEFKDKIPVAMRQHYLGLFTEECLKFSSSHLEAIEKAQSEE 132
>UNIPROTKB|H3BQ98 [details] [associations]
symbol:LOC81691 "Protein LOC81691" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
EMBL:AC004381 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
Ensembl:ENST00000565340 Bgee:H3BQ98 Uniprot:H3BQ98
Length = 143
Score = 291 (107.5 bits), Expect = 3.3e-25, P = 3.3e-25
Identities = 67/128 (52%), Positives = 84/128 (65%)
Query: 396 ESLVKPYNPITNYLTAYSGITRALLAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHA 455
+ LVKP N I +YLT++SGIT+ +L PV T+L+ VQ+ L LLPPDA+LVG SL+ DL A
Sbjct: 2 DELVKPENKILDYLTSFSGITKKILNPVTTKLKDVQRQLKALLPPDAVLVGHSLDLDLRA 61
Query: 456 LKMMHPYVIDTSVIF-NTTGIRTHKPKLKMLTSHFLGLDIQNQDG-GHCSKEDAIAALRL 513
LKM+HPYVIDTS+++ G R KLK L LG DIQ D GH + EDA L L
Sbjct: 62 LKMIHPYVIDTSLLYVREQGRRF---KLKFLAKVILGKDIQCPDRLGHDATEDARTILEL 118
Query: 514 VKLKLSKG 521
+ L G
Sbjct: 119 ARYFLKHG 126
Score = 106 (42.4 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 30/67 (44%), Positives = 37/67 (55%)
Query: 53 QMMHPYVIDTSVIF-NTTGIRTHKPKLKMLTSHFLGLDIQNQDG-GHCSKEDAIAALRLV 110
+M+HPYVIDTS+++ G R KLK L LG DIQ D GH + EDA L L
Sbjct: 63 KMIHPYVIDTSLLYVREQGRRF---KLKFLAKVILGKDIQCPDRLGHDATEDARTILELA 119
Query: 111 KLKLSKG 117
+ L G
Sbjct: 120 RYFLKHG 126
>UNIPROTKB|A0PJM3 [details] [associations]
symbol:REXO1L2P "Putative exonuclease GOR-like protein"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AF279874 IPI:IPI00937866
UniGene:Hs.535056 ProteinModelPortal:A0PJM3 SMR:A0PJM3 PRIDE:A0PJM3
UCSC:uc010mgi.2 GeneCards:GC08M086790 HGNC:HGNC:32239
neXtProt:NX_A0PJM3 HOGENOM:HOG000112759 HOVERGEN:HBG107960
InParanoid:A0PJM3 OrthoDB:EOG4PZJ5X ArrayExpress:A0PJM3
Genevestigator:A0PJM3 Uniprot:A0PJM3
Length = 583
Score = 305 (112.4 bits), Expect = 8.3e-25, Sum P(2) = 8.3e-25
Identities = 73/168 (43%), Positives = 100/168 (59%)
Query: 352 KEVYAEVTPTSPLYGLDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTA 411
KE+ + P +Y LDCEMC T++ ELTRVT+VD VVY++ VKP N I +Y T
Sbjct: 399 KELSRDAYPG--IYALDCEMCYTTHGL-ELTRVTVVDADMRVVYDTFVKPDNEIVDYNTR 455
Query: 412 YSGITRALLAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIF- 470
+SG+T A +A + L VQ IL IL+G SL DL ALK++H V+DT+V+F
Sbjct: 456 FSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHSTVVDTAVLFP 515
Query: 471 NTTGIRTHKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKLKL 518
+ G +K L+ L + +L IQ+ GH S EDA A L+LV K+
Sbjct: 516 HYLGF-PYKRSLRNLAADYLAQIIQDSQDGHNSSEDANACLQLVMWKV 562
Score = 42 (19.8 bits), Expect = 8.3e-25, Sum P(2) = 8.3e-25
Identities = 19/97 (19%), Positives = 33/97 (34%)
Query: 146 PGLRDRFVKMEVIPPSSYTTSLVHELVMSSRHMEAQDMTPSKETSLPSNVTNSTHSPSQT 205
P R ++ P + S V R A +P T S SQ
Sbjct: 85 PAQRGSACRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQR 144
Query: 206 IKSAFPIGTQPVRSANTESLSATSQNTKSQSQNIESA 242
+ + +G QP ++ N ++ + T S + + A
Sbjct: 145 SRGS-KVGRQPGKTRNRSGMACKTTATTSSKRIVRRA 180
Score = 40 (19.1 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 179 EAQDMTPSKETSLPSNVTNSTHSPSQ 204
E Q+ P+ + P VT S + P+Q
Sbjct: 62 EPQNRGPAVPPAWPKMVTESCYFPAQ 87
>UNIPROTKB|Q8IX06 [details] [associations]
symbol:REXO1L1 "Exonuclease GOR" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
HOGENOM:HOG000112759 HOVERGEN:HBG107960 OrthoDB:EOG4PZJ5X
EMBL:AC093331 EMBL:AF495523 EMBL:AF023669 IPI:IPI00892939
RefSeq:NP_758439.4 UniGene:Hs.373854 ProteinModelPortal:Q8IX06
SMR:Q8IX06 STRING:Q8IX06 PhosphoSite:Q8IX06 DMDM:205831276
PaxDb:Q8IX06 PRIDE:Q8IX06 DNASU:254958 Ensembl:ENST00000379010
GeneID:254958 KEGG:hsa:254958 UCSC:uc022axf.1 CTD:254958
GeneCards:GC08M086568 H-InvDB:HIX0034285 H-InvDB:HIX0168820
H-InvDB:HIX0188684 H-InvDB:HIX0188686 H-InvDB:HIX0188687
H-InvDB:HIX0188688 H-InvDB:HIX0188689 H-InvDB:HIX0188690
HGNC:HGNC:24660 neXtProt:NX_Q8IX06 PharmGKB:PA142671078
InParanoid:Q8IX06 KO:K14570 OMA:RIARIPM GenomeRNAi:254958
NextBio:92431 Bgee:Q8IX06 CleanEx:HS_REXO1L1 Genevestigator:Q8IX06
Uniprot:Q8IX06
Length = 675
Score = 306 (112.8 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 73/168 (43%), Positives = 100/168 (59%)
Query: 352 KEVYAEVTPTSPLYGLDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTA 411
KE+ + P +Y LDCEMC T++ ELTRVT+VD VVY++ VKP N I +Y T
Sbjct: 491 KELSRDAYPG--IYALDCEMCYTTHGL-ELTRVTVVDADMRVVYDTFVKPDNEIVDYNTR 547
Query: 412 YSGITRALLAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIF- 470
+SG+T A +A + L VQ IL IL+G SL DL ALK++H V+DT+V+F
Sbjct: 548 FSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHSTVVDTAVLFP 607
Query: 471 NTTGIRTHKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKLKL 518
+ G +K L+ L + +L IQ+ GH S EDA A L+LV K+
Sbjct: 608 HYLGF-PYKRSLRNLAADYLAQIIQDSQDGHNSSEDASACLQLVMWKV 654
Score = 42 (19.8 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 19/97 (19%), Positives = 33/97 (34%)
Query: 146 PGLRDRFVKMEVIPPSSYTTSLVHELVMSSRHMEAQDMTPSKETSLPSNVTNSTHSPSQT 205
P R ++ P + S V R A +P T S SQ
Sbjct: 177 PAQRGSACRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQR 236
Query: 206 IKSAFPIGTQPVRSANTESLSATSQNTKSQSQNIESA 242
+ + +G QP ++ N ++ + T S + + A
Sbjct: 237 SRGS-KVGRQPGKTRNRSGMACKTTATTSSKRIVRRA 272
Score = 40 (19.1 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 179 EAQDMTPSKETSLPSNVTNSTHSPSQ 204
E Q+ P+ + P VT S + P+Q
Sbjct: 154 EPQNRGPAVPPAWPKMVTESCYFPAQ 179
>UNIPROTKB|F5GW92 [details] [associations]
symbol:REXO1L10P "Protein REXO1L10P" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 IPI:IPI00937866
HGNC:HGNC:32239 KO:K14570 EMBL:AC232323 RefSeq:XP_002342903.1
Ensembl:ENST00000425429 Ensembl:ENST00000540724 GeneID:100288562
KEGG:hsa:100288562 OMA:VIHCTVV NextBio:20778309 Uniprot:F5GW92
Length = 675
Score = 305 (112.4 bits), Expect = 2.0e-24, Sum P(2) = 2.0e-24
Identities = 73/168 (43%), Positives = 100/168 (59%)
Query: 352 KEVYAEVTPTSPLYGLDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTA 411
KE+ + P +Y LDCEMC T++ ELTRVT+VD VVY++ VKP N I +Y T
Sbjct: 491 KELSRDAYPG--IYALDCEMCYTTHGL-ELTRVTVVDADMRVVYDTFVKPDNEIVDYNTR 547
Query: 412 YSGITRALLAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIF- 470
+SG+T A +A + L VQ IL IL+G SL DL ALK++H V+DT+V+F
Sbjct: 548 FSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHSTVVDTAVLFP 607
Query: 471 NTTGIRTHKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKLKL 518
+ G +K L+ L + +L IQ+ GH S EDA A L+LV K+
Sbjct: 608 HYLGF-PYKRSLRNLAADYLAQIIQDSQDGHNSSEDANACLQLVMWKV 654
Score = 42 (19.8 bits), Expect = 2.0e-24, Sum P(2) = 2.0e-24
Identities = 19/97 (19%), Positives = 33/97 (34%)
Query: 146 PGLRDRFVKMEVIPPSSYTTSLVHELVMSSRHMEAQDMTPSKETSLPSNVTNSTHSPSQT 205
P R ++ P + S V R A +P T S SQ
Sbjct: 177 PAQRGSACRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDAKRTRVASSSQR 236
Query: 206 IKSAFPIGTQPVRSANTESLSATSQNTKSQSQNIESA 242
+ + +G QP ++ N ++ + T S + + A
Sbjct: 237 SRGS-KVGRQPGKTRNRSGMACKTTATTSSKRIVRRA 272
Score = 40 (19.1 bits), Expect = 3.2e-24, Sum P(2) = 3.2e-24
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 179 EAQDMTPSKETSLPSNVTNSTHSPSQ 204
E Q+ P+ + P VT S + P+Q
Sbjct: 154 EPQNRGPAVPPAWPKMVTESCYFPAQ 179
>ZFIN|ZDB-GENE-030131-1650 [details] [associations]
symbol:rexo1 "REX1, RNA exonuclease 1 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
ZFIN:ZDB-GENE-030131-1650 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 KO:K14570
GeneTree:ENSGT00630000089807 CTD:57455 HOGENOM:HOG000039979
HOVERGEN:HBG090644 OMA:GGWETSY EMBL:BX511253 IPI:IPI00896271
RefSeq:NP_001119888.1 UniGene:Dr.64589 Ensembl:ENSDART00000079618
GeneID:564551 KEGG:dre:564551 NextBio:20885442 Uniprot:B0S6F3
Length = 1207
Score = 287 (106.1 bits), Expect = 4.4e-24, Sum P(2) = 4.4e-24
Identities = 65/174 (37%), Positives = 101/174 (58%)
Query: 348 YINTKEVYAEVTPTSPLYGLDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYNPITN 407
++ T V + +Y LDCEMC T ELTRVT+++ + VVY++ VKP + + +
Sbjct: 1030 FVKTFSKPLPVDGNAGVYALDCEMCYTKQGL-ELTRVTVINSELKVVYDTFVKPGSRVVD 1088
Query: 408 YLTAYSGITRALLAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVIDTS 467
Y T +SG+T L L VQ +L + D+IL+G SL DL ALK++H V+DT+
Sbjct: 1089 YNTRFSGVTADDLENTTISLRDVQAVLLSMFSADSILIGHSLESDLFALKLIHSMVVDTA 1148
Query: 468 VIF-NTTGIRTHKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKLKLSK 520
++F + G+ +K L+ L + +L IQ+ GGH S EDA A + L+ K+ +
Sbjct: 1149 IVFPHRLGL-PYKRALRNLMADYLKRIIQDNVGGHDSSEDARACMELMIWKIKE 1201
Score = 68 (29.0 bits), Expect = 4.4e-24, Sum P(2) = 4.4e-24
Identities = 28/119 (23%), Positives = 58/119 (48%)
Query: 182 DMTPSKETSLPSNVTNSTHSPSQTIKSAFPIGTQPVRSANTESLSATSQNTKSQSQNIE- 240
D T S++ + + T+ S SQT + T V+ N +S + SQ + S +++
Sbjct: 338 DDTESQDVNRTNKKTDKKVSASQTKTNK----TDKVKKENKDS-NKKSQKEQQDSSSVDK 392
Query: 241 ---SAFQNTKSQSQYIESAFQNTKSQPQNIQLASQSTKSKSEIPLNDESKSATPQNTES 296
S+ + SQS+ IE + +K + + AS+S + K + + +++S+ + +S
Sbjct: 393 TSKSSSKKDNSQSKNIEGS-SKSKEKSHKDKSASKSAEEKDKKVVKIKTESSHKEKNKS 450
Score = 61 (26.5 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 21/74 (28%), Positives = 31/74 (41%)
Query: 216 PVRSANTESLSATSQNTKSQSQNIESAFQNTKSQSQYIESAFQNTKSQPQNIQLASQSTK 275
P S +TES N K+ + S + K+ E+ N KSQ + +S
Sbjct: 334 PCESDDTESQDVNRTNKKTDKKVSASQTKTNKTDKVKKENKDSNKKSQKEQQDSSSVDKT 393
Query: 276 SKSEIPL-NDESKS 288
SKS N +SK+
Sbjct: 394 SKSSSKKDNSQSKN 407
Score = 57 (25.1 bits), Expect = 6.3e-23, Sum P(2) = 6.3e-23
Identities = 25/117 (21%), Positives = 55/117 (47%)
Query: 175 SRHMEAQDMTPSKETSLPSNVTNSTHSPSQTIKSAFPIGTQPVR-SANTESLS-ATSQNT 232
S+ + + K+ S TN T + K + + + S++ + S ++S+
Sbjct: 342 SQDVNRTNKKTDKKVSASQTKTNKTDKVKKENKDSNKKSQKEQQDSSSVDKTSKSSSKKD 401
Query: 233 KSQSQNIESAFQNTKSQSQYIESAFQNTKSQPQNIQLASQSTKSKSEIPLNDESKSA 289
SQS+NIE + +K +S +SA ++ + + + + K K+E +++KS+
Sbjct: 402 NSQSKNIEGS-SKSKEKSHKDKSASKSAEEKDKKV------VKIKTESSHKEKNKSS 451
Score = 45 (20.9 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 10/57 (17%), Positives = 28/57 (49%)
Query: 186 SKETSLPSNVTNSTHSPSQTIKSAFPIGTQPVRSANTESLSATSQNTKSQSQNIESA 242
S +S P++ ++ SP++ + + Q ++++S T Q + + ++S+
Sbjct: 725 SLPSSKPADASSRVLSPTRVVTDQLSVKAQTSAGILSKTISTTVQKRVAHTPTLKSS 781
Score = 45 (20.9 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 20/95 (21%), Positives = 38/95 (40%)
Query: 158 IPPSSYTTSLVHELVMSSRHMEAQDMTPSK-ETSLPSNVTNSTHSPSQTIKSAFPIGTQP 216
I SS + H+ +S+ E +D K +T N + + K P+ T
Sbjct: 408 IEGSSKSKEKSHKDKSASKSAEEKDKKVVKIKTESSHKEKNKSSDGIKKPKMDKPVKTDK 467
Query: 217 VRSANTESLSATSQNTKSQSQNIESAFQNTKSQSQ 251
V S + + ++ + +S+ NTK +S+
Sbjct: 468 VLSKIKDQKNGKLESGSKEKDKKKSSSSNTKDKSK 502
Score = 41 (19.5 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 15/72 (20%), Positives = 32/72 (44%)
Query: 226 SATSQNTKSQSQNIESAFQNTKSQSQYIESAFQNTKSQPQNIQLASQSTKSKSEIPLNDE 285
SA Q K Q ++ F +S + + K + + ASQ+ +K++ + E
Sbjct: 316 SAMGQQ-KKQISKTDAYFSPCESDDTESQDVNRTNKKTDKKVS-ASQTKTNKTD-KVKKE 372
Query: 286 SKSATPQNTESQ 297
+K + ++ + Q
Sbjct: 373 NKDSNKKSQKEQ 384
>UNIPROTKB|E2QX02 [details] [associations]
symbol:REXO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 OMA:VAYDRSP EMBL:AAEX03012623
EMBL:AAEX03012624 Ensembl:ENSCAFT00000030942 Uniprot:E2QX02
Length = 1208
Score = 299 (110.3 bits), Expect = 3.4e-23, P = 3.4e-23
Identities = 72/168 (42%), Positives = 100/168 (59%)
Query: 352 KEVYAEVTPTSPLYGLDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTA 411
KE+ + P +Y LDCEM T+ ELTRVT+VD VVY++ VKP N I +Y T
Sbjct: 1037 KELSEDAHPG--IYALDCEMSYTTYGL-ELTRVTVVDTDMQVVYDTFVKPDNEIVDYNTR 1093
Query: 412 YSGITRALLAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIF- 470
+SG+T A LA + L VQ +L + D +L+G SL DL ALK++H V+DTSV+F
Sbjct: 1094 FSGVTEADLADTSISLRDVQAVLLSMFSADTVLIGHSLESDLLALKVIHSTVVDTSVLFP 1153
Query: 471 NTTGIRTHKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKLKL 518
+ G+ +K L+ L + +L IQ+ GH S EDA A + LV K+
Sbjct: 1154 HRLGL-PYKRSLRNLMADYLRQIIQDNVDGHSSSEDASACMHLVIWKI 1200
>UNIPROTKB|F1SDH3 [details] [associations]
symbol:LOC100525449 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 KO:K14570
GeneTree:ENSGT00630000089807 OMA:VAYDRSP EMBL:FP236669
EMBL:FP102751 RefSeq:XP_003123050.1 RefSeq:XP_003123064.2
UniGene:Ssc.70280 Ensembl:ENSSSCT00000014685
Ensembl:ENSSSCT00000014691 GeneID:100513338 GeneID:100525449
KEGG:ssc:100513338 KEGG:ssc:100525449 Uniprot:F1SDH3
Length = 1211
Score = 297 (109.6 bits), Expect = 5.7e-23, P = 5.7e-23
Identities = 72/168 (42%), Positives = 100/168 (59%)
Query: 352 KEVYAEVTPTSPLYGLDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTA 411
KE+ + P +Y LDCEM T+ ELTRVT+VD VVY++ V+P N I +Y T
Sbjct: 1040 KELSGDAHPG--IYALDCEMSYTTYGL-ELTRVTVVDTDLQVVYDTFVRPDNEIVDYNTR 1096
Query: 412 YSGITRALLAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIF- 470
+SG+T A LA + L VQ +L + D IL+G SL DL ALK++H V+DTSV+F
Sbjct: 1097 FSGVTEADLADTSISLRDVQAVLLSMFSSDTILIGHSLESDLLALKVIHSTVVDTSVLFP 1156
Query: 471 NTTGIRTHKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKLKL 518
+ G+ +K L+ L + +L IQ+ GH S EDA A + LV K+
Sbjct: 1157 HRLGL-PYKRSLRNLMADYLRQIIQDNVDGHSSSEDASACMHLVIWKI 1203
>UNIPROTKB|H3BM72 [details] [associations]
symbol:LOC81691 "Protein LOC81691" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 EMBL:AC004381
InterPro:IPR013520 SUPFAM:SSF53098 Ensembl:ENST00000566276
Bgee:H3BM72 Uniprot:H3BM72
Length = 212
Score = 270 (100.1 bits), Expect = 7.1e-23, P = 7.1e-23
Identities = 63/135 (46%), Positives = 86/135 (63%)
Query: 319 TMLLLSALQMIEEDYPIPLRGELSAKFSKYINTKEVYAEVTPTSPLYGLDCEMCKTSNDQ 378
T LL+ +M + PL+G + ++ TK + SPL+GLDCEMC TS +
Sbjct: 84 TRCLLTKEEM--RTFHFPLQGFPDCE--NFLLTK-CNGSIADNSPLFGLDCEMCLTSKGR 138
Query: 379 NELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVATRLEHVQKILSELL 438
ELTR++LV E V + LVKP N I +YLT++SGIT+ +L PV T+L+ VQ+ L LL
Sbjct: 139 -ELTRISLVAEGGCCVMDELVKPENKILDYLTSFSGITKKILNPVTTKLKDVQRQLKALL 197
Query: 439 PPDAILVGQSLNCDL 453
PPDA+LVG SL+ DL
Sbjct: 198 PPDAVLVGHSLDLDL 212
>UNIPROTKB|Q8N1G1 [details] [associations]
symbol:REXO1 "RNA exonuclease 1 homolog" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0005634 GO:GO:0003676 GO:GO:0004527 GO:GO:0090305
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AC012615
OrthoDB:EOG4PZJ5X KO:K14570 EMBL:AB032964 EMBL:BC032244
IPI:IPI00297396 RefSeq:NP_065746.3 UniGene:Hs.192477
ProteinModelPortal:Q8N1G1 SMR:Q8N1G1 IntAct:Q8N1G1
MINT:MINT-1401484 STRING:Q8N1G1 PhosphoSite:Q8N1G1 DMDM:296452990
PaxDb:Q8N1G1 PRIDE:Q8N1G1 Ensembl:ENST00000170168 GeneID:57455
KEGG:hsa:57455 UCSC:uc002lua.4 CTD:57455 GeneCards:GC19M001815
H-InvDB:HIX0014594 H-InvDB:HIX0027481 HGNC:HGNC:24616 HPA:HPA042155
HPA:HPA042552 MIM:609614 neXtProt:NX_Q8N1G1 PharmGKB:PA142671077
HOGENOM:HOG000039979 HOVERGEN:HBG090644 InParanoid:Q8N1G1
OMA:VAYDRSP GenomeRNAi:57455 NextBio:63632 ArrayExpress:Q8N1G1
Bgee:Q8N1G1 CleanEx:HS_REXO1 Genevestigator:Q8N1G1
GermOnline:ENSG00000079313 Uniprot:Q8N1G1
Length = 1221
Score = 300 (110.7 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 73/168 (43%), Positives = 101/168 (60%)
Query: 352 KEVYAEVTPTSPLYGLDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTA 411
KE+ + P +Y LDCEM T+ ELTRVT+VD +VVY++ VKP N I +Y T
Sbjct: 1050 KELSGDTHPG--IYALDCEMSYTTYGL-ELTRVTVVDTDVHVVYDTFVKPDNEIVDYNTR 1106
Query: 412 YSGITRALLAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIF- 470
+SG+T A LA + L VQ +L + D IL+G SL DL ALK++H V+DTSV+F
Sbjct: 1107 FSGVTEADLADTSVTLRDVQAVLLSMFSADTILIGHSLESDLLALKVIHSTVVDTSVLFP 1166
Query: 471 NTTGIRTHKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKLKL 518
+ G+ +K L+ L + +L IQ+ GH S EDA A + LV K+
Sbjct: 1167 HRLGL-PYKRSLRNLMADYLRQIIQDNVDGHSSSEDAGACMHLVIWKV 1213
Score = 39 (18.8 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 174 SSRHMEAQDMTPSKETSLPSNVTNST-HSPSQTIKSAFPIGTQPVRSANTESLSAT 228
S+RH+ + P S ++P+ K P G+ R +++E +AT
Sbjct: 241 SARHLSRASSRDERAAKRPRGSRGSEPYTPAPK-KLCDPFGSCDARFSDSEDEAAT 295
>UNIPROTKB|E1BDF8 [details] [associations]
symbol:LOC788506 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005634 GO:GO:0003676
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 KO:K14570
GeneTree:ENSGT00630000089807 CTD:57455 OMA:VAYDRSP
EMBL:DAAA02020285 IPI:IPI00700340 RefSeq:NP_001179237.1
UniGene:Bt.25942 Ensembl:ENSBTAT00000026945 GeneID:512048
KEGG:bta:512048 NextBio:20870228 Uniprot:E1BDF8
Length = 1211
Score = 287 (106.1 bits), Expect = 7.6e-22, P = 7.6e-22
Identities = 69/168 (41%), Positives = 99/168 (58%)
Query: 352 KEVYAEVTPTSPLYGLDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTA 411
KE+ + P +Y LDCEM T+ ELTRVT+VD VVY++ V+P N I +Y T
Sbjct: 1040 KELSGDAHPG--VYALDCEMSYTTYGL-ELTRVTVVDTDLQVVYDTFVRPDNEIVDYNTR 1096
Query: 412 YSGITRALLAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIF- 470
+SG+T A LA + L VQ +L + D +L+G SL DL L+++H V+DTSV+F
Sbjct: 1097 FSGVTEADLADTSISLRDVQAVLLSMFSSDTVLIGHSLESDLLCLQVIHSTVVDTSVLFP 1156
Query: 471 NTTGIRTHKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKLKL 518
+ G+ +K L+ L + +L IQ+ GH S EDA A + LV K+
Sbjct: 1157 HRLGL-PYKRSLRNLMADYLRQIIQDNVDGHSSSEDASACMHLVIWKI 1203
>MGI|MGI:1914182 [details] [associations]
symbol:Rexo1 "REX1, RNA exonuclease 1 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 MGI:MGI:1914182
GO:GO:0005634 GO:GO:0003676 GO:GO:0004527 GO:GO:0090305
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 OrthoDB:EOG4PZJ5X
KO:K14570 GeneTree:ENSGT00630000089807 CTD:57455
HOGENOM:HOG000039979 HOVERGEN:HBG090644 OMA:VAYDRSP EMBL:AK173108
EMBL:AK006228 EMBL:AK144769 EMBL:BC039623 EMBL:BC052424
EMBL:BC069964 IPI:IPI00469996 IPI:IPI00759993 RefSeq:NP_080128.2
UniGene:Mm.1116 ProteinModelPortal:Q7TT28 SMR:Q7TT28 IntAct:Q7TT28
PhosphoSite:Q7TT28 PRIDE:Q7TT28 Ensembl:ENSMUST00000057910
GeneID:66932 KEGG:mmu:66932 UCSC:uc007gdq.1 UCSC:uc007gds.1
InParanoid:Q7TT28 NextBio:323057 Bgee:Q7TT28 CleanEx:MM_REXO1
Genevestigator:Q7TT28 GermOnline:ENSMUSG00000047417 Uniprot:Q7TT28
Length = 1213
Score = 287 (106.1 bits), Expect = 7.6e-22, P = 7.6e-22
Identities = 67/156 (42%), Positives = 94/156 (60%)
Query: 364 LYGLDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPV 423
++ LDCEM T+ ELTRVT+VD VVY++ VKP N + +Y T +SG+T A L
Sbjct: 1052 VFALDCEMSYTTYGL-ELTRVTVVDTDMQVVYDTFVKPDNEVVDYNTRFSGVTEADLVDT 1110
Query: 424 ATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIF-NTTGIRTHKPKL 482
+ L VQ +L + D IL+G SL DL ALK++H V+DTSV+F + G+ +K L
Sbjct: 1111 SITLRDVQAVLLSMFSADTILIGHSLESDLLALKVIHGTVVDTSVLFPHRLGL-PYKRSL 1169
Query: 483 KMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKLKL 518
+ L + +L IQ+ GH S EDA A + LV K+
Sbjct: 1170 RNLMADYLRQIIQDNVDGHSSSEDASACMHLVIWKI 1205
>ZFIN|ZDB-GENE-061013-448 [details] [associations]
symbol:zgc:152968 "zgc:152968" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 ZFIN:ZDB-GENE-061013-448 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 EMBL:CR762466 IPI:IPI00870950
ProteinModelPortal:B8JII5 Ensembl:ENSDART00000139636
HOVERGEN:HBG106838 OMA:DPMEECY ArrayExpress:B8JII5 Bgee:B8JII5
Uniprot:B8JII5
Length = 1251
Score = 265 (98.3 bits), Expect = 8.3e-22, Sum P(2) = 8.3e-22
Identities = 63/159 (39%), Positives = 93/159 (58%)
Query: 358 VTPTSP-LYGLDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGIT 416
V T P +Y +D + C T+ EL RVT+V VV++S VKP N + +Y T +SGI+
Sbjct: 1082 VGKTCPGIYAIDTQTCYTTQGL-ELARVTVVSSSLQVVFDSFVKPDNDVIDYNTRFSGIS 1140
Query: 417 RALLAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIF-NTTGI 475
A + ++ L VQ +L + D IL+G L DL ALK++H V+DTSV+F + G+
Sbjct: 1141 EADVKSSSSSLRDVQAVLLSFINADTILIGHGLENDLAALKIIHSTVVDTSVVFPHRLGL 1200
Query: 476 RTHKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLV 514
HK +L LT+ +L IQ GH ++EDA A + L+
Sbjct: 1201 -PHKRELNSLTADYLRRIIQESVEGHDTREDATACMELM 1238
Score = 71 (30.1 bits), Expect = 8.3e-22, Sum P(2) = 8.3e-22
Identities = 32/124 (25%), Positives = 56/124 (45%)
Query: 166 SLVHELVMSSRHMEAQDMTPSKETSLPSNVTNSTHSPSQTIKSAFPIGTQPVRSANTESL 225
S + + S ++ ++D++ + P + S SP + +G P S +SL
Sbjct: 462 SSISGYALKSENVSSKDISQIHQQYFPMVSSQSLPSPLHKAEEHRFLG--PPHS---QSL 516
Query: 226 SATSQNTKSQSQNIESAFQNTKSQSQYIESAFQNTKSQPQNIQLASQSTKSKSEIPLNDE 285
+ TS T QS + E QNT + Y+ S P N QL ++ +S ++P ++
Sbjct: 517 TETSWVTL-QSSHGEPFVQNTPA---YVSEIDFGVVSAPSNSQLNPRTVESIEKLPTSNV 572
Query: 286 SKSA 289
S SA
Sbjct: 573 SYSA 576
Score = 52 (23.4 bits), Expect = 7.9e-20, Sum P(2) = 7.9e-20
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 239 IESAFQNTKSQSQYIESAFQN-TKSQPQNIQLASQSTKSKS 278
+ S + + SQ SA QN T +PQN ++ + KS++
Sbjct: 433 VNSVYGDECISSQSPRSALQNLTSREPQNSSISGYALKSEN 473
Score = 43 (20.2 bits), Expect = 6.9e-19, Sum P(2) = 6.9e-19
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 212 IGTQPVRSANTESLSATSQNTKSQSQNIESAFQNTKSQSQYIESAFQNTKSQ 263
I +Q RSA S QN+ ++S ++K SQ + F SQ
Sbjct: 442 ISSQSPRSALQNLTSREPQNSSISGYALKSENVSSKDISQIHQQYFPMVSSQ 493
>UNIPROTKB|F1N3K9 [details] [associations]
symbol:LOC100335177 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 EMBL:DAAA02022135 EMBL:DAAA02022136
IPI:IPI00687563 Ensembl:ENSBTAT00000048722 OMA:FAVNCEV
Uniprot:F1N3K9
Length = 387
Score = 271 (100.5 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 64/165 (38%), Positives = 96/165 (58%)
Query: 364 LYGLDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPV 423
++ + CE C T+ E TRVT+VD VVY++ VKP + +Y T +SG+ L +
Sbjct: 226 VFAMSCEACYTAKGL-EPTRVTVVDPSLQVVYDTFVKPDEEVIDYNTRFSGVAEDDLKNM 284
Query: 424 ATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIF-NTTGIRTHKPKL 482
T + VQ IL L D IL+G S L+ALK++H ++DT+V+F + G+ H+ L
Sbjct: 285 KTSVRDVQAILLNLFSADTILIGHSFEHSLYALKLIHTSIVDTTVLFPHPLGL-PHRRSL 343
Query: 483 KMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKLKLSKGDLIGLK 527
K L + +L IQ++ GGH S E+A A + LV K++ DL G K
Sbjct: 344 KGLVADYLQRVIQDEVGGHSSSENATACMELVLWKVND-DLKGKK 387
>UNIPROTKB|F1P0Z1 [details] [associations]
symbol:REXO1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 OMA:VAYDRSP EMBL:AADN02066720
IPI:IPI00599868 Ensembl:ENSGALT00000001557 Uniprot:F1P0Z1
Length = 1217
Score = 274 (101.5 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 61/158 (38%), Positives = 93/158 (58%)
Query: 364 LYGLDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPV 423
++ LDCEMC T ELTRVT+++ VVY++ VKP + +Y T +SG+T L
Sbjct: 1056 IFALDCEMCYTKQGL-ELTRVTVINSDLKVVYDTFVKPDTKVVDYNTRFSGVTEEDLENT 1114
Query: 424 ATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIF-NTTGIRTHKPKL 482
+ L VQ +L + D IL+G SL DL ALK++H V+DT+++F + G+ +K L
Sbjct: 1115 SITLRDVQAVLLNMFSADTILIGHSLESDLFALKLIHGTVVDTAIVFPHRLGL-PYKRAL 1173
Query: 483 KMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKLKLSK 520
+ L + +L IQ+ GH S EDA A + L+ K+ +
Sbjct: 1174 RTLMADYLKRIIQDNVEGHDSSEDARACMELMIWKIKE 1211
Score = 50 (22.7 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 26/120 (21%), Positives = 48/120 (40%)
Query: 174 SSRHMEAQDMTPSKETSLPSNVTNSTHSPSQTIKSAFPIGTQPVRSANTESLSAT-SQNT 232
SS EA S S PS + + S + S ++ +A
Sbjct: 290 SSSEDEADAEYKSTSVSSPSKAGSESESEDGLSNKERSAASGDFSSQGSKETAAKYGMED 349
Query: 233 KSQSQNI--ESAFQ-NTKSQSQYIESAFQNTKSQPQNIQLASQSTKSKSEIPLNDESKSA 289
SQ I ++A + N K+ Y Q T+++ N + ++ + KS++ ++SK+A
Sbjct: 350 LPSSQKIPPKTALEKNAKAAKSYSGKNDQETENK--NKESKDKTKRKKSDVSKKEKSKNA 407
Score = 50 (22.7 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 30/147 (20%), Positives = 61/147 (41%)
Query: 151 RFVKMEVIPPSSYTTSLVHELVMSSRHMEAQDMTPSKETSLPSNVTNSTHSPSQTIKSAF 210
RF E + Y ++ V + E++D +KE S S +S S K
Sbjct: 288 RFSSSEDEADAEYKSTSVSSPSKAGSESESEDGLSNKERSAASGDFSSQGSKETAAKYGM 347
Query: 211 ---PIGTQ-PVRSA---NTESLSATS--QNTKSQSQNIESAFQNTKSQSQYIESAFQNTK 261
P + P ++A N ++ + S + +++++N ES TK + + ++
Sbjct: 348 EDLPSSQKIPPKTALEKNAKAAKSYSGKNDQETENKNKESK-DKTKRKKSDVSKKEKSKN 406
Query: 262 SQPQNIQLASQSTKSKSEIPLNDESKS 288
++ + + K+K+E N + KS
Sbjct: 407 AEKDKVGKKEEKAKTKNE-EKNCKDKS 432
Score = 46 (21.3 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 11/49 (22%), Positives = 23/49 (46%)
Query: 145 LPGLRDRFVKMEVIPPSSYTTSLVHELVMSSRHMEAQDMTPSKETSLPS 193
LPG + R +P + T ++ LV + + +TP+ ++ P+
Sbjct: 716 LPGEKRRIAH---VPNVALTAAVKQSLVSGKKTAAGKSVTPANDSEAPT 761
Score = 41 (19.5 bits), Expect = 9.6e-20, Sum P(2) = 9.6e-20
Identities = 7/62 (11%), Positives = 31/62 (50%)
Query: 218 RSANTESLSATSQNTKSQSQNIESAFQNTKSQSQYIESAFQNTKSQPQNIQLASQSTKSK 277
+ ++TE L + + +K ++ ++++ + + S+++ + + + + + A + K
Sbjct: 459 KGSSTEKLGGSKKESKLKTADVKNGKETSSSKNKDKGTKTSTVEQKKEKVNPAGKGDPKK 518
Query: 278 SE 279
+
Sbjct: 519 GQ 520
Score = 40 (19.1 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 26/142 (18%), Positives = 49/142 (34%)
Query: 155 MEVIPPSSYTTSLVHELVMSSRHMEAQDMTPSKETSLPSNVTNSTHSPSQTIKSAFPIGT 214
+E P S+Y+ L+ + + PS E + P + A +
Sbjct: 233 LEYDPLSNYSARLLSKATTKELKGSKRGRAPSYEDPYSPSRKKLCEVPDEYEVCARFSSS 292
Query: 215 QPVRSANTESLSATSQNTKSQSQNIESAFQNTKSQSQYIESAFQNTKSQPQNIQLASQST 274
+ A +S S +S + E N K +S F + S+ + +
Sbjct: 293 EDEADAEYKSTSVSSPSKAGSESESEDGLSN-KERSA-ASGDFSSQGSKETAAKYGMEDL 350
Query: 275 KSKSEIPLNDESKSATPQNTES 296
S +IP K+A +N ++
Sbjct: 351 PSSQKIP----PKTALEKNAKA 368
>UNIPROTKB|F1P8U5 [details] [associations]
symbol:F1P8U5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 EMBL:AAEX03007922 OMA:FAVNCEV
Ensembl:ENSCAFT00000002678 Uniprot:F1P8U5
Length = 369
Score = 258 (95.9 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 63/165 (38%), Positives = 96/165 (58%)
Query: 364 LYGLDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPV 423
++ ++CE+C T+ ELT+VT+VD VVY++ VKP + + +Y T SG+ L
Sbjct: 209 VFAVNCEVCYTAKGL-ELTQVTVVDPSLQVVYDTFVKPDDEVIDYNTRLSGVVEDDLKNT 267
Query: 424 ATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIF-NTTGIRTHKPKL 482
T + VQ IL L D +L+G S L+ALK++H V+DT+++F + G+ HK L
Sbjct: 268 KTSIRDVQAILLNLFSADTVLIGHSFEHSLYALKLIHSSVVDTTILFPHRLGL-PHKRSL 326
Query: 483 KMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKLKLSKGDLIGLK 527
K L + +L IQ+ D + S E+A A + LV K+ K DL G K
Sbjct: 327 KSLVADYLQRIIQDDDHNN-SSENATACMELVLWKV-KEDLKGKK 369
>UNIPROTKB|I3LLP7 [details] [associations]
symbol:I3LLP7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
SUPFAM:SSF53098 GeneTree:ENSGT00630000089807 EMBL:CU571150
Ensembl:ENSSSCT00000025893 OMA:QKKRIAH Uniprot:I3LLP7
Length = 999
Score = 261 (96.9 bits), Expect = 3.7e-19, Sum P(3) = 3.7e-19
Identities = 68/168 (40%), Positives = 96/168 (57%)
Query: 364 LYGLDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTA--YSGITRALLA 421
++ ++C+MC T+ ELT VT+VD VVY++ VKP I +Y T +SG+ L
Sbjct: 835 VFAVNCQMCYTAKGL-ELTHVTVVDSSLQVVYDTFVKPDEEIIDYNTRSRFSGVVENDLK 893
Query: 422 PVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIF-NTTGIRTHKP 480
T + VQ IL L D IL+G S L+ALK++H V+DT+V+F + G+ HK
Sbjct: 894 NTKTSICDVQAILLNLFSADTILIGHSFEHSLYALKLIHTSVVDTTVMFPHRLGL-PHKR 952
Query: 481 KLKMLTSHFLGLDIQNQD-GGHCSKEDAIAALRLVKLKLSKGDLIGLK 527
LK L + +L IQ+ GGH S E+A A + LV K+ K DL G K
Sbjct: 953 SLKSLVADYLQRIIQDDGFGGHNSSENATACMELVLWKV-KDDLKGKK 999
Score = 47 (21.6 bits), Expect = 3.7e-19, Sum P(3) = 3.7e-19
Identities = 19/95 (20%), Positives = 39/95 (41%)
Query: 204 QTIKSAFPIGTQPVRSANTESLSATSQNTKS--QSQNIESAFQNTKSQSQYIESAFQNTK 261
++ A P + + + ES + ++ K+ +QN+E + ++ Q Y + Q
Sbjct: 325 ESTSCALPCDKEIQKEHHNESYPKSRRHVKTCYDTQNMEWRYSPSQPQFSYSDDHIQEKV 384
Query: 262 SQPQNIQLASQSTKSKSEIPLNDESKSATPQNTES 296
+ QN + + + I D K T +T S
Sbjct: 385 LRVQNDSQDLNTFEDRKLIEF-DFDKECTEDDTLS 418
Score = 41 (19.5 bits), Expect = 3.7e-19, Sum P(3) = 3.7e-19
Identities = 15/63 (23%), Positives = 26/63 (41%)
Query: 27 QIKRLENKKRKMDALVEIKTLNEADKQMMHP------YVIDTSVIFNTTGIRTHKPKLKM 80
QI+ +E +K +D ++ T + D P +D N G++ H K+
Sbjct: 256 QIRGIEEEK--VDK-TQLTTQRDGDSNRSEPPKSLMKTSLDNKTNINLCGVKNHISKMGS 312
Query: 81 LTS 83
TS
Sbjct: 313 FTS 315
>TAIR|locus:2169717 [details] [associations]
symbol:SDN2 "small RNA degrading nuclease 2" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003676 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AB005241 KO:K14570
HOGENOM:HOG000083886 EMBL:BT009685 EMBL:AK118437 IPI:IPI00548498
IPI:IPI00892313 RefSeq:NP_001119175.1 RefSeq:NP_196173.1
UniGene:At.43773 ProteinModelPortal:Q9FFG1 SMR:Q9FFG1 IntAct:Q9FFG1
PaxDb:Q9FFG1 PRIDE:Q9FFG1 EnsemblPlants:AT5G05540.1 GeneID:830437
KEGG:ath:AT5G05540 TAIR:At5g05540 InParanoid:Q9FFG1 OMA:QAFENIA
PhylomeDB:Q9FFG1 ProtClustDB:CLSN2686647 Genevestigator:Q9FFG1
Uniprot:Q9FFG1
Length = 466
Score = 242 (90.2 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 65/206 (31%), Positives = 100/206 (48%)
Query: 323 LSALQMIEEDYPIPLRGELSAKFSKYINTKEVYAEVTPTS-PLYGLDCEMCKTSNDQNEL 381
L + + ++YP+ +A+ ++ T ++ PT + +DCEM + +
Sbjct: 102 LVRMTLTHDEYPLDYLFPSNAE--DWVRTGLGKKKMEPTKIEMIAIDCEMVLCEDGSEAV 159
Query: 382 TRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVATRLEHVQKILSELLPPD 441
RV VD V+ + VKP P+ +Y T +G+T L + +Q+ L + D
Sbjct: 160 VRVAAVDRDLKVILDEFVKPNQPVVDYRTFITGLTAQDLEKATISVVDIQEKLLMFISED 219
Query: 442 AILVGQSLNCDLHALKMMHPYVIDTSVIF--NTTG----IRTHKPKLKMLTSHFLGLDIQ 495
ILVGQSLN DL LK+ H VIDTS++F N G +R +P L L LG ++Q
Sbjct: 220 TILVGQSLNHDLKVLKVDHARVIDTSLVFKYNYDGTRRPLRLKRPSLNYLCKCILGYEVQ 279
Query: 496 NQDGGHCSKEDAIAALRLVKLKLSKG 521
+ H DA AA++LV L G
Sbjct: 280 KEGVPHNCVHDAEAAMKLVLAILDNG 305
Score = 37 (18.1 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 256 AFQNTKSQPQNIQLASQSTKSKSEI 280
AF T + +++QL ++S K +++
Sbjct: 61 AFLTTLKKKEDLQLLAKSLKLDNDV 85
>FB|FBgn0261548 [details] [associations]
symbol:CG42666 species:7227 "Drosophila melanogaster"
[GO:0004527 "exonuclease activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:AE014298 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 FlyBase:FBgn0261548 UniGene:Dm.19
GeneID:31136 KEGG:dme:Dmel_CG42666 GenomeRNAi:31136 NextBio:772085
EMBL:AY069617 RefSeq:NP_569945.1 SMR:Q8T023
EnsemblMetazoa:FBtr0302654 UCSC:CG14801-RB InParanoid:Q8T023
Uniprot:Q8T023
Length = 787
Score = 245 (91.3 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 62/159 (38%), Positives = 89/159 (55%)
Query: 364 LYGLDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPV 423
+Y LDCEM T ++T+V+LV +VYE V+P I +Y T YSGIT L
Sbjct: 620 VYALDCEMSYTGRGL-DVTKVSLVALNGQLVYEHFVRPVCDIIDYNTQYSGITETDLCSG 678
Query: 424 ATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIFNTTGIRTHKPKLK 483
A L VQ+ L +L+ D IL+G L DL AL+++H +IDTS+ F ++ L+
Sbjct: 679 AKSLAEVQRDLLQLITADTILIGHGLENDLRALRLVHNTLIDTSISFPHCNGFPYRRALR 738
Query: 484 MLTSHFLGLDIQNQDG--GHCSKEDAIAALRLVKLKLSK 520
LT L DIQ DG GH S ED+ A + L+ ++++
Sbjct: 739 HLTKVHLKRDIQAGDGTTGHSSFEDSRACMELMLWRVNR 777
Score = 37 (18.1 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 159 PPSSYTTSLVHELVMSSRHMEAQDMTPSKETSLPSNVTNSTHS 201
P S++ S + SS T S TS S+ TNS S
Sbjct: 308 PNSNHGGSSQQKTCDSSSSSALSSPTSSATTSATSSPTNSPTS 350
>TAIR|locus:2083163 [details] [associations]
symbol:SDN1 "small RNA degrading nuclease 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008408 "3'-5' exonuclease activity"
evidence=IDA] [GO:0010587 "miRNA catabolic process" evidence=IDA]
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR012677
SMART:SM00479 Pfam:PF00929 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0008408 EMBL:AL132978 KO:K14570 GO:GO:0010587 EMBL:BT030315
IPI:IPI00540352 PIR:T45863 RefSeq:NP_190579.2 UniGene:At.35533
ProteinModelPortal:A3KPE8 SMR:A3KPE8 PaxDb:A3KPE8 PRIDE:A3KPE8
EnsemblPlants:AT3G50100.1 GeneID:824172 KEGG:ath:AT3G50100
TAIR:At3g50100 HOGENOM:HOG000083886 InParanoid:A3KPE8 OMA:DYRTDIT
PhylomeDB:A3KPE8 ProtClustDB:CLSN2925541 Genevestigator:A3KPE8
Uniprot:A3KPE8
Length = 409
Score = 228 (85.3 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 54/165 (32%), Positives = 82/165 (49%)
Query: 357 EVTPTSPLYGLDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGIT 416
+V ++ + +DCEM + L RV +VD V+ + VKP P+ +Y T +GIT
Sbjct: 133 KVMESTNMVAVDCEMVLCEDGTEGLVRVGVVDRDLKVILDEFVKPNKPVVDYRTDITGIT 192
Query: 417 RALLAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIFNTTGIR 476
+ + + +Q+ L L ILVG SLN DL LK+ HP VIDT+++F R
Sbjct: 193 AEDIENASLSVVDIQETLQPFLSTGTILVGHSLNRDLEVLKIDHPKVIDTALVFKYPNTR 252
Query: 477 T-HKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKLKLSK 520
+P L L LG +++ H DA AA++L + K
Sbjct: 253 KLRRPSLNNLCKSILGYEVRKTGVPHDCVHDASAAMKLALAVVEK 297
>ASPGD|ASPL0000065793 [details] [associations]
symbol:AN10955 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0000027 "ribosomal large subunit assembly"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0003676 GO:GO:0005622 EMBL:BN001304 GO:GO:0004527
HOGENOM:HOG000182422 InterPro:IPR013520 SUPFAM:SSF53098
ProteinModelPortal:C8VBH1 EnsemblFungi:CADANIAT00000588 OMA:KHMAEAR
Uniprot:C8VBH1
Length = 299
Score = 200 (75.5 bits), Expect = 7.8e-16, Sum P(2) = 7.8e-16
Identities = 62/155 (40%), Positives = 86/155 (55%)
Query: 367 LDCEMCKTSND-QNE--LTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPV 423
+DCEM D N+ L RV++V+ + VY+S V+P +T++ T SGI +A
Sbjct: 107 MDCEMVGIGPDPDNDSALARVSIVNYNGDQVYDSYVRPKEMVTDWRTHVSGILPKHMAE- 165
Query: 424 ATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPY--VIDTSVIFNTTGIRTH-KP 480
A LE VQK ++E+L ILVG +L DL AL + HP + DTS + P
Sbjct: 166 ARSLEQVQKEVAEILE-GRILVGHALRNDLDALLLSHPKRDIRDTSKHPPYRKVAGGGSP 224
Query: 481 KLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVK 515
+LK+L S FLGL+IQ G H S EDA A + L +
Sbjct: 225 RLKILASEFLGLNIQA--GAHSSMEDAKATMLLYR 257
Score = 54 (24.1 bits), Expect = 7.8e-16, Sum P(2) = 7.8e-16
Identities = 23/100 (23%), Positives = 41/100 (41%)
Query: 144 ELPGLRDRFVKMEVIPPSSYTTSLVHELVMSSRHMEAQDMTPSKETSLPSNVTNSTHSPS 203
EL L + K++ +T + S R + D+ ++++ + NST
Sbjct: 2 ELKALSSNWKKLQETLKKDVSTPPTQKRKRSDREPQ-NDLVKKRKSAAEAGKRNSTSRTV 60
Query: 204 QTIKSAFPI--GTQPVR-SANTESLSATSQNTKSQSQNIE 240
Q K + GT SAN S + S+ + +S N+E
Sbjct: 61 QAPKKQKRMSQGTPDKNASANETSNAVVSRENEGRSPNVE 100
>ZFIN|ZDB-GENE-070928-8 [details] [associations]
symbol:isg20l2 "interferon stimulated exonuclease
gene 20-like 2" species:7955 "Danio rerio" [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
ZFIN:ZDB-GENE-070928-8 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 CTD:81875
OrthoDB:EOG4H4641 EMBL:AL954306 EMBL:BC152518 IPI:IPI00931450
RefSeq:NP_001096663.1 UniGene:Dr.87096 Ensembl:ENSDART00000109664
GeneID:558447 KEGG:dre:558447 HOVERGEN:HBG095874 InParanoid:A3KH10
NextBio:20882472 Uniprot:A3KH10
Length = 321
Score = 218 (81.8 bits), Expect = 8.9e-16, P = 8.9e-16
Identities = 66/167 (39%), Positives = 86/167 (51%)
Query: 360 PTSPL-Y-GLDCEMCKTS--NDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGI 415
P P+ Y LDCEM T Q+EL R ++V +VVY+ VKP NP+T+Y T +SGI
Sbjct: 130 PPGPIKYLALDCEMVGTGPKGAQSELARCSIVSYDGDVVYDKYVKPINPVTDYRTRWSGI 189
Query: 416 TRALLAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHP--YVIDTSVI--FN 471
R L AT H QK + +++ ++VG +++ D ALK HP DTS I N
Sbjct: 190 RRQDLLH-ATPFYHAQKEIVKIIT-GKVVVGHAIHNDFKALKYFHPAFQTRDTSRIPLLN 247
Query: 472 TTGIRTHKP--KLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKL 516
K LK LT L DIQ GH S EDA A + L K+
Sbjct: 248 EKAGFPEKQCVSLKKLTQAILKRDIQTGYRGHSSVEDAKATMELYKV 294
>POMBASE|SPBC1604.09c [details] [associations]
symbol:SPBC1604.09c "exoribonuclease Rex4 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0008408 "3'-5' exonuclease
activity" evidence=ISO] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 PomBase:SPBC1604.09c Pfam:PF00929 GO:GO:0005730
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003676
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0006364 KO:K01175 OMA:NDIPESQ
PIR:T39505 RefSeq:NP_596631.1 ProteinModelPortal:O94375
STRING:O94375 EnsemblFungi:SPBC1604.09c.1 GeneID:2540203
KEGG:spo:SPBC1604.09c OrthoDB:EOG4TB7M4 NextBio:20801335
Uniprot:O94375
Length = 260
Score = 189 (71.6 bits), Expect = 8.9e-16, Sum P(2) = 8.9e-16
Identities = 53/164 (32%), Positives = 88/164 (53%)
Query: 367 LDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVATR 426
+DCEM ++D + L RV++V+ +VVY++ V+P +T++ T SG+ ++ A
Sbjct: 96 MDCEMVGVADDMSVLARVSIVNYHGHVVYDTYVRPKEKVTDWRTWVSGV-KSFHMRDAPS 154
Query: 427 LEHVQKILSELLPPDAILVGQSLNCDLHALKMMHP--YVIDTSVIFNTTGI-RTHKPKLK 483
E VQ ++++L + +LVG +++ DL L + HP + DTS + + P LK
Sbjct: 155 FEKVQAEVAKILD-NRVLVGHAVHNDLKVLLLSHPRRMIRDTSRFSGYRKLAKGRTPGLK 213
Query: 484 MLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKLKLSKGDLIGLK 527
L LG DIQ+ G H S +DA A + L K + D + K
Sbjct: 214 KLAEVILGRDIQS--GQHSSVQDAQATMELYKKVKKEMDEVAFK 255
Score = 47 (21.6 bits), Expect = 8.9e-16, Sum P(2) = 8.9e-16
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 22 KMNARQIKRLENKKRKMDALVEIKTLNEA-DKQMMHPYVIDTSVIFNTTGIRT 73
K N + + +KKR M+ L + N+ + Q++ Y +D S + T + T
Sbjct: 38 KNNENENSYIVDKKR-MNELKKFAKENDIPESQVLDAYGVDASKLTRKTNLET 89
>UNIPROTKB|I3L751 [details] [associations]
symbol:REXO4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005730 GO:GO:0003676
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:QKEVAEM EMBL:FP565513
Ensembl:ENSSSCT00000028732 Uniprot:I3L751
Length = 421
Score = 222 (83.2 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 63/153 (41%), Positives = 86/153 (56%)
Query: 367 LDCEMCKTS--NDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVA 424
LDCEM D++ L RV+LV++ VY+ VKP P+T+Y TA SGI LA
Sbjct: 245 LDCEMVGVGPQGDESMLARVSLVNQFGKCVYDKYVKPTQPVTDYRTAVSGIRPENLAQ-G 303
Query: 425 TRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPY--VIDTSVI--FNTTGIRTHKP 480
E VQK ++ LL ILVG +L+ DL L + HP V DT F + +++ +P
Sbjct: 304 EEFEIVQKEVAALLK-GRILVGHALHNDLKVLFLGHPKKKVRDTQKYRPFRSQ-VKSGRP 361
Query: 481 KLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRL 513
LK+L LGL +Q + HCS +DA AA+RL
Sbjct: 362 SLKLLAEKILGLPVQQAE--HCSVQDAQAAMRL 392
Score = 42 (19.8 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 15/83 (18%), Positives = 32/83 (38%)
Query: 215 QPVRSANTESLSATSQNTKSQSQNIESAFQNTKSQSQYIESAFQNTKSQPQNIQLASQST 274
+P A ESL + N++ Q Q + + + +++ E +NT + S
Sbjct: 73 KPKSQALEESLVPSRLNSRKQPQRAQPSRKAVPDRAERSEVGTENTAPEASGGAAPSPRL 132
Query: 275 KSKSEIPLNDESKSATPQNTESQ 297
++ + P Q+ E +
Sbjct: 133 PTQRKRPAPRTQAGGRAQHREKE 155
>UNIPROTKB|F1N5B5 [details] [associations]
symbol:REXO4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005730 GO:GO:0003676
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:QKEVAEM EMBL:DAAA02032345
EMBL:DAAA02032346 IPI:IPI01000627 Ensembl:ENSBTAT00000026283
Uniprot:F1N5B5
Length = 402
Score = 224 (83.9 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 61/156 (39%), Positives = 88/156 (56%)
Query: 367 LDCEMCKTSNDQNE--LTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVA 424
+DCEM + E + RV+LV++ VY+ VKP P+T+Y TA SG+ A LA
Sbjct: 228 MDCEMVGVGPEGEESVVARVSLVNQHGRCVYDKHVKPTQPVTDYRTAVSGVRPADLAQ-G 286
Query: 425 TRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPY--VIDTSVI--FNTTGIRTHKP 480
E VQ+ ++ELL ILVG +L+ DL AL + HP + DT F T +++ +P
Sbjct: 287 EEFEVVQREVAELLK-GRILVGHALHNDLKALFLGHPKKKIRDTQKYKPFRTQ-VKSGRP 344
Query: 481 KLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKL 516
LK+L LG+ +Q + HCS +DA A+RL L
Sbjct: 345 SLKLLAERILGIQVQQAE--HCSVQDAQVAMRLYVL 378
Score = 37 (18.1 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 259 NTKSQPQNIQLASQSTKSKSE 279
++K QPQ +Q S K++
Sbjct: 82 DSKKQPQRVQQNRNSISDKAK 102
>WB|WBGene00004095 [details] [associations]
symbol:pqe-1 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0005634 GO:GO:0003676 GO:GO:0004527 GO:GO:0090305
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 KO:K14570
EMBL:FO081435 PIR:T16421 RefSeq:NP_498135.2 RefSeq:NP_498136.2
RefSeq:NP_498137.2 RefSeq:NP_741133.1 RefSeq:NP_741134.1
RefSeq:NP_741135.1 UniGene:Cel.17767 ProteinModelPortal:Q10124
SMR:Q10124 DIP:DIP-26275N MINT:MINT-1038159 STRING:Q10124
PaxDb:Q10124 PRIDE:Q10124 EnsemblMetazoa:F52C9.8b GeneID:175731
KEGG:cel:CELE_F52C9.8 UCSC:F52C9.8d.2 CTD:175731 WormBase:F52C9.8a
WormBase:F52C9.8b WormBase:F52C9.8c WormBase:F52C9.8d
WormBase:F52C9.8e WormBase:F52C9.8f GeneTree:ENSGT00630000089807
InParanoid:Q10124 OMA:DICRYHN NextBio:889402 ArrayExpress:Q10124
Uniprot:Q10124
Length = 1647
Score = 230 (86.0 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 61/187 (32%), Positives = 100/187 (53%)
Query: 344 KFSKYINTKEVYAEVTPTSPLYGLDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYN 403
+ S +++T ++ +Y LDCEM T L R+T+VD Q N V + VKP
Sbjct: 1458 ELSTFVSTPVPVPNDQRSTRVYALDCEMVYTIAGP-ALARLTMVDMQRNRVLDVFVKPPT 1516
Query: 404 PITNYLTAYSGITRALLAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYV 463
+ + T +SG+T + L+ + L + + D IL+G SL DL A++++H V
Sbjct: 1517 DVLDPNTEFSGLTMEQINSAPDTLKTCHQKLFKYVNADTILIGHSLESDLKAMRVVHKNV 1576
Query: 464 IDTSVIFNTTGIRTHKPKLKMLTSHFLGLDIQ--NQDG-GHCSKEDAIAALRLVKLKLSK 520
IDT+++F +T R K LK+L++ L +IQ N+D GH S EDA+ + L+ L
Sbjct: 1577 IDTAILFRST--RDTKVALKVLSAKLLHKNIQGDNEDAIGHDSMEDALTCVDLIFYGLRN 1634
Query: 521 GDLIGLK 527
+ I ++
Sbjct: 1635 PESIAIR 1641
Score = 52 (23.4 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 26/93 (27%), Positives = 38/93 (40%)
Query: 174 SSRHMEAQDMTPSKETSLPSNVTNSTHSPSQTIKSAFPIGTQPVRSANTESLSATSQNTK 233
S R D S+ET P N + SPS KS S++T S S+ T
Sbjct: 941 SMRSTSPNDRRKSRETP-PGNRSMRRTSPSDGRKSRDTPTASSSMSSSTLSYCKKSKETP 999
Query: 234 SQSQNIESAFQNTKSQSQYIESAFQNTKSQPQN 266
+ IE Q K++ Q +N K++ +N
Sbjct: 1000 MSYEEIE---QQKKAKRQ------RNCKTREEN 1023
Score = 52 (23.4 bits), Expect = 2.3e-15, Sum P(3) = 2.3e-15
Identities = 25/89 (28%), Positives = 40/89 (44%)
Query: 201 SPSQTIKSAFPIGTQPVRSANT--ESLSATSQNTKSQSQNIESAFQNTK--SQSQYIESA 256
S S++ KSA P + R T S+ +TS N + +S+ ++ + S S +S
Sbjct: 916 SDSRSKKSATPTDRRRSRDTPTGSRSMRSTSPNDRRKSRETPPGNRSMRRTSPSDGRKSR 975
Query: 257 FQNTKSQPQNIQLASQSTKSKSEIPLNDE 285
T S + S KSK E P++ E
Sbjct: 976 DTPTASSSMSSSTLSYCKKSK-ETPMSYE 1003
Score = 46 (21.3 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 18/76 (23%), Positives = 30/76 (39%)
Query: 229 SQNTKSQSQNIESAFQNTKSQSQYIESAFQNT--KSQPQNIQLASQSTKSKSE-----IP 281
SQN + Q Q + ++ SQ + A K++P Q+++ K E +P
Sbjct: 32 SQNAQQQQQQASAPGTSSGGPSQAVSGASSGASMKTEPVARQVSTAQMKRDLEQAAVYVP 91
Query: 282 LNDESKSATPQNTESQ 297
S PQ + Q
Sbjct: 92 TPIPEGSTQPQQRQQQ 107
Score = 43 (20.2 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 24/112 (21%), Positives = 43/112 (38%)
Query: 181 QDMTPSKETSLPSNVTNSTHSPSQTIKSAFPIGTQPVRSANTESLSATSQNTKSQSQNIE 240
Q ++ S P ST + K+A GT P +++ S+ + Q
Sbjct: 100 QPQQRQQQQSQPQARQMSTQQAANLRKNAAAAGTPP-----KQAMQGASREQGNAHQ--P 152
Query: 241 SAFQNTKSQSQYIESAFQNTKSQPQNIQLASQSTKSKSEIPLNDESKSATPQ 292
+A Q +S +Q + N PQ +Q + + P + ++A PQ
Sbjct: 153 TAGQIPQSSNQPAQQT-HNVPRMPQPLQQVPHPSPVRGSHPAAQQVQNA-PQ 202
Score = 43 (20.2 bits), Expect = 1.9e-14, Sum P(3) = 1.9e-14
Identities = 17/84 (20%), Positives = 33/84 (39%)
Query: 205 TIKSAFPIGTQPVRSANTESLSATSQNTKSQSQNIES-AFQNTKSQSQYIESAFQNTKSQ 263
T A P QP S +S + + S+ + + K+++ I +
Sbjct: 732 TTNQAVP-QNQPASSVQIAQVSTSESDAPGTSEAAATETMTSPKTKNNVIVETEGEQEED 790
Query: 264 PQNIQLASQSTKSKSEIPLNDESK 287
I + +S K +++I NDE +
Sbjct: 791 EDEIPI-KKSKKRRAKIVSNDEEE 813
Score = 42 (19.8 bits), Expect = 2.3e-15, Sum P(3) = 2.3e-15
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 174 SSRHMEAQDMTPSKETSLPSN-VTNSTH 200
+++H + + P TSLP N N TH
Sbjct: 375 AAQHPSSGTVAPMHITSLPGNHPLNRTH 402
Score = 42 (19.8 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 198 STHSPSQTIKSAFP---IGTQPVRSANTESLSATSQNTKSQSQNIESAFQNTKSQSQYIE 254
S+ PSQ + A + T+PV A S + ++ + + + + +Q Q
Sbjct: 48 SSGGPSQAVSGASSGASMKTEPV--ARQVSTAQMKRDLEQAAVYVPTPIPEGSTQPQQR- 104
Query: 255 SAFQNTKSQPQNIQLASQ 272
Q +SQPQ Q+++Q
Sbjct: 105 ---QQQQSQPQARQMSTQ 119
>TAIR|locus:2155563 [details] [associations]
symbol:SDN3 "small RNA degrading nuclease 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0016592 "mediator complex" evidence=IDA]
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00479 Pfam:PF00929 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
EMBL:AB020742 GO:GO:0016592 KO:K14570 UniGene:At.28408
UniGene:At.71151 EMBL:AY080843 EMBL:BT001977 IPI:IPI00524191
RefSeq:NP_201525.2 ProteinModelPortal:Q8RXK2 SMR:Q8RXK2
IntAct:Q8RXK2 STRING:Q8RXK2 PaxDb:Q8RXK2 PRIDE:Q8RXK2
EnsemblPlants:AT5G67240.1 GeneID:836859 KEGG:ath:AT5G67240
TAIR:At5g67240 HOGENOM:HOG000154279 InParanoid:Q8RXK2 OMA:LYVRKMV
PhylomeDB:Q8RXK2 ProtClustDB:CLSN2918891 Genevestigator:Q8RXK2
Uniprot:Q8RXK2
Length = 782
Score = 230 (86.0 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
Identities = 55/167 (32%), Positives = 81/167 (48%)
Query: 356 AEVTPTSPLYGLDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGI 415
++V ++ + +DCEM + L RV VD VV + VKP P+ +Y T +G+
Sbjct: 137 SKVIKSTRMLSIDCEMVTCEDGSQALVRVGAVDRDLKVVLDKFVKPDKPVIDYKTDITGV 196
Query: 416 TRALLAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIFNTTGI 475
T L + +QK L L ILVG L+ DL L++ H VIDTS +F
Sbjct: 197 TAEDLERATLSVADIQKKLRRFLSVGTILVGHGLHNDLQVLRIDHARVIDTSYVFEFVDA 256
Query: 476 -RTHKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKLKLSKG 521
+T +P L L LG +++ H DA AA++LV + KG
Sbjct: 257 PKTQRPSLNNLCKSVLGQEVRMDGAAHNCVHDAAAAMKLVLAAVEKG 303
Score = 37 (18.1 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
Identities = 13/62 (20%), Positives = 30/62 (48%)
Query: 237 QNIESAFQNTKSQSQYIESAFQNTKSQPQNIQLASQSTKSKSEIPLNDESKSATP-QNTE 295
+ + S+ + +S + AF T + +++QL ++ + + L ++ K TP + T
Sbjct: 41 KKLGSSLSDPARRSNDVLVAFLLTFKKKEDLQLIARVMQCGANRELIEKFKQETPDKETP 100
Query: 296 SQ 297
Q
Sbjct: 101 EQ 102
>POMBASE|SPAC1782.08c [details] [associations]
symbol:rex3 "exonuclease Rex3 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0000467 "exonucleolytic trimming to
generate mature 3'-end of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006396
"RNA processing" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISO] [GO:0034476 "U5 snRNA 3'-end processing"
evidence=ISO] [GO:0043628 "ncRNA 3'-end processing" evidence=ISO]
InterPro:IPR000571 InterPro:IPR006055 InterPro:IPR012337
PROSITE:PS50103 SMART:SM00479 PomBase:SPAC1782.08c Pfam:PF00929
GO:GO:0005739 GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0000467
GO:GO:0034476 PIR:T50098 RefSeq:NP_594715.1
ProteinModelPortal:Q9P7H2 EnsemblFungi:SPAC1782.08c.1
GeneID:2542165 KEGG:spo:SPAC1782.08c OMA:CETANSK OrthoDB:EOG48KVM8
NextBio:20803237 Uniprot:Q9P7H2
Length = 540
Score = 217 (81.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 54/157 (34%), Positives = 88/157 (56%)
Query: 367 LDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVATR 426
LDCE+C T+N EL R+T+V +E+++ + +KP I + T +SGI A
Sbjct: 385 LDCELCYTTNGM-ELARLTVV-AKESIIMDVFIKPKGKILSLNTRFSGIHDAKELESGIT 442
Query: 427 LEHVQKILSEL-LPPDAILVGQSLNCDLHALKMMHPYVIDTSVIFNTTGIRTHKPKLKML 485
++ + + EL + + IL+G L DL+A++++H VIDT+++F + LK L
Sbjct: 443 MDQMYIKIKELGMNKNTILIGHGLENDLNAMRLIHKRVIDTALLFTHARGPPFRYSLKYL 502
Query: 486 TSHFLGLDIQNQDGGHCSKEDAIAALRLVKLKLSKGD 522
T +LG IQ H S+EDA++AL+LV K +
Sbjct: 503 TKKYLGTTIQTST--HDSEEDAVSALQLVFYKTKSNE 537
>UNIPROTKB|Q9GZR2 [details] [associations]
symbol:REXO4 "RNA exonuclease 4" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=NAS]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
EMBL:CH471090 GO:GO:0003700 GO:GO:0003676 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
EMBL:AL158826 KO:K01175 EMBL:AF295774 EMBL:AF273304 EMBL:AL136894
EMBL:AK025493 EMBL:AK314333 EMBL:BC009274 IPI:IPI00010653
IPI:IPI00513877 RefSeq:NP_065118.2 UniGene:Hs.438409
ProteinModelPortal:Q9GZR2 SMR:Q9GZR2 IntAct:Q9GZR2 STRING:Q9GZR2
PhosphoSite:Q9GZR2 DMDM:71153418 SWISS-2DPAGE:Q9GZR2 PaxDb:Q9GZR2
PRIDE:Q9GZR2 DNASU:57109 Ensembl:ENST00000371935
Ensembl:ENST00000371942 Ensembl:ENST00000445916
Ensembl:ENST00000453165 Ensembl:ENST00000454825
Ensembl:ENST00000562216 Ensembl:ENST00000568937
Ensembl:ENST00000569763 Ensembl:ENST00000570226 GeneID:57109
KEGG:hsa:57109 UCSC:uc004cdm.3 CTD:57109 GeneCards:GC09M136271
HGNC:HGNC:12820 HPA:HPA047006 MIM:602930 neXtProt:NX_Q9GZR2
PharmGKB:PA37414 HOGENOM:HOG000231626 HOVERGEN:HBG000999
InParanoid:Q9GZR2 OMA:QKEVAEM OrthoDB:EOG4VX263 PhylomeDB:Q9GZR2
GenomeRNAi:57109 NextBio:62959 ArrayExpress:Q9GZR2 Bgee:Q9GZR2
CleanEx:HS_REXO4 Genevestigator:Q9GZR2 GermOnline:ENSG00000148300
Uniprot:Q9GZR2
Length = 422
Score = 213 (80.0 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 58/153 (37%), Positives = 87/153 (56%)
Query: 367 LDCEMCKTS--NDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVA 424
LDCEM +++ RV++V++ VY+ VKP P+T+Y TA SGI L
Sbjct: 246 LDCEMVGVGPKGEESMAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQ-G 304
Query: 425 TRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPY--VIDTSVI--FNTTGIRTHKP 480
LE VQK ++E+L ILVG +L+ DL L + HP + DT F + +++ +P
Sbjct: 305 EELEVVQKEVAEMLK-GRILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFKSQ-VKSGRP 362
Query: 481 KLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRL 513
L++L+ LGL +Q + HCS +DA AA+RL
Sbjct: 363 SLRLLSEKILGLQVQQAE--HCSIQDAQAAMRL 393
>CGD|CAL0006310 [details] [associations]
symbol:orf19.4948 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000175 "3'-5'-exoribonuclease activity" evidence=IEA]
[GO:0034476 "U5 snRNA 3'-end processing" evidence=IEA] [GO:0000467
"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
CGD:CAL0006310 Pfam:PF00929 GO:GO:0005634 GO:GO:0005737
GO:GO:0003676 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AACQ01000010
EMBL:AACQ01000009 GO:GO:0006364 RefSeq:XP_722159.1
RefSeq:XP_722272.1 ProteinModelPortal:Q5AL29 STRING:Q5AL29
GeneID:3636061 GeneID:3636164 KEGG:cal:CaO19.12413
KEGG:cal:CaO19.4948 Uniprot:Q5AL29
Length = 404
Score = 212 (79.7 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 62/179 (34%), Positives = 96/179 (53%)
Query: 348 YINTKEVYAEVTPTSP--LYGLDCEMCKTSNDQNELTRVTLVDE-QENVVYESLVKPYNP 404
Y TKE++ + S + G+DCEM T+ EL R+T +D V + +KP
Sbjct: 223 YQFTKELFTTTSTKSKSRVLGIDCEMGFTTKGF-ELMRITAIDYFTSKTVLDIFIKPIGE 281
Query: 405 ITNYLTAYSGITRALLAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVI 464
I ++ T YSGI L + + ++K L E++ + IL+G L D++A++++H +I
Sbjct: 282 IVDFNTRYSGI-HELTDDFLSWEQSMEK-LGEIMDSETILIGHGLENDMNAMRLIHENII 339
Query: 465 DTSVIFNT---TGIRTHKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKLKLSK 520
DTS++F TG T + LK L FL IQ G H S ED+IAA+ +VK + K
Sbjct: 340 DTSILFPNKWKTG-PTRRWSLKDLAFEFLSRRIQT--GEHDSCEDSIAAIDIVKYFVKK 395
>UNIPROTKB|F1PBR5 [details] [associations]
symbol:REXO4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AAEX03006772
Ensembl:ENSCAFT00000031428 Uniprot:F1PBR5
Length = 411
Score = 207 (77.9 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 55/153 (35%), Positives = 86/153 (56%)
Query: 367 LDCEMCKTS--NDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVA 424
+DCEM +++ RV++V++ VY+ VKP P+T+Y TA SGI L
Sbjct: 235 MDCEMVGAGPKGEESVAARVSIVNQYGKCVYDKYVKPTQPVTDYRTAVSGIRPENLKQ-G 293
Query: 425 TRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPY--VIDTSVI--FNTTGIRTHKP 480
+ E VQK ++++L ILVG +L+ DL L + HP + DT F + +++ +P
Sbjct: 294 EKFEVVQKEVADMLK-GRILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFKSQ-VKSGRP 351
Query: 481 KLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRL 513
LK+L LG+ +Q + HCS +DA AA+RL
Sbjct: 352 SLKLLAERILGIQVQQAE--HCSIQDAQAAMRL 382
>WB|WBGene00013244 [details] [associations]
symbol:Y56A3A.33 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0006974
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
EMBL:AL132860 KO:K14570 GeneTree:ENSGT00630000089807
RefSeq:NP_499565.1 ProteinModelPortal:Q9U220 SMR:Q9U220
EnsemblMetazoa:Y56A3A.33.1 EnsemblMetazoa:Y56A3A.33.2 GeneID:176636
KEGG:cel:CELE_Y56A3A.33 UCSC:Y56A3A.33 CTD:176636
WormBase:Y56A3A.33 HOGENOM:HOG000019974 InParanoid:Q9U220
OMA:HTLNGLE NextBio:893398 ArrayExpress:Q9U220 Uniprot:Q9U220
Length = 365
Score = 205 (77.2 bits), Expect = 8.0e-14, P = 8.0e-14
Identities = 51/157 (32%), Positives = 90/157 (57%)
Query: 361 TSPLYGLDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALL 420
++ ++ LDCE+ T N E+ RV+LVD + V+ ++ P + ++ + +SG+T +
Sbjct: 178 SNKVFALDCELVHTLNGL-EVARVSLVDMKGKVLLDTFALPVFEVISFNSTFSGVTEKDM 236
Query: 421 APVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIFNTTG-IRTHK 479
A LE + L +L+ + +LVG SL DL AL+++H VIDT+V+F+ R++
Sbjct: 237 ES-AISLEACRLQLFQLINSETLLVGHSLESDLKALRLVHHNVIDTAVLFSIVDPSRSYI 295
Query: 480 PKLKM--LTSHFLGLDIQNQDGGHCSKEDAIAALRLV 514
KL + L +L D+Q++ GH S ED+ + L+
Sbjct: 296 LKLSLQNLAKKYLCKDVQSEASGHSSIEDSHTCMELL 332
>MGI|MGI:2684957 [details] [associations]
symbol:Rexo4 "REX4, RNA exonuclease 4 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 MGI:MGI:2684957
GO:GO:0005730 GO:GO:0003676 GO:GO:0004527 GO:GO:0090305
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 KO:K01175 CTD:57109
HOGENOM:HOG000231626 HOVERGEN:HBG000999 EMBL:AK079733 EMBL:AK138894
EMBL:BC060147 IPI:IPI00407108 RefSeq:NP_997117.2 UniGene:Mm.291874
ProteinModelPortal:Q6PAQ4 SMR:Q6PAQ4 PhosphoSite:Q6PAQ4
PaxDb:Q6PAQ4 PRIDE:Q6PAQ4 DNASU:227656 Ensembl:ENSMUST00000114020
GeneID:227656 KEGG:mmu:227656 UCSC:uc008iwn.1 InParanoid:Q6PAQ4
OMA:EWESIAR ChiTaRS:REXO4 NextBio:378724 Bgee:Q6PAQ4
CleanEx:MM_REXO4 Genevestigator:Q6PAQ4
GermOnline:ENSMUSG00000052406 Uniprot:Q6PAQ4
Length = 432
Score = 201 (75.8 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 56/153 (36%), Positives = 85/153 (55%)
Query: 367 LDCEMCKTS--NDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVA 424
LDCEM +++ RV++V++ VY+ VKP P+T+Y TA SGI L
Sbjct: 256 LDCEMVGVGPKGEESIAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQ-G 314
Query: 425 TRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPY--VIDTSVI--FNTTGIRTHKP 480
E V+K ++E+L ILVG +L+ DL L + HP + DT F + +++ +P
Sbjct: 315 EEFEVVKKEVAEMLK-GRILVGHALHNDLKVLFLDHPKKKIRDTQKFKPFRSR-VKSGRP 372
Query: 481 KLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRL 513
LK L+ LG+ +Q + HCS +DA AA+RL
Sbjct: 373 SLKRLSEKILGIRVQQAE--HCSIQDAQAAMRL 403
Score = 47 (21.6 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 13/59 (22%), Positives = 27/59 (45%)
Query: 236 SQNIESAFQNTKSQSQYIESAFQNTKSQPQNIQLASQSTKSKSEIPLNDESKSATPQNT 294
SQN ++ + K +SQ E + + Q+ Q+ K S+ D+ ++ ++T
Sbjct: 81 SQNWKALQELLKQKSQAAEKPLVSQMDDKMHPQIIQQNRKKASDKSKGDKQRTEKAKST 139
>UNIPROTKB|H9KZR7 [details] [associations]
symbol:H9KZR7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AADN02075373
Ensembl:ENSGALT00000017760 OMA:PTESDIW Uniprot:H9KZR7
Length = 379
Score = 182 (69.1 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 55/157 (35%), Positives = 83/157 (52%)
Query: 367 LDCEMCKT--SNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVA 424
+DCEM S + + + RV++V+ +Y+ VKP +T+Y TA SGI L
Sbjct: 208 MDCEMVGVGPSGEDSIVARVSIVNLFGKCIYDKYVKPTEEVTDYRTAVSGIRPEHLK-TG 266
Query: 425 TRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPY--VIDTSVI--FNTTGIRTHKP 480
+ VQK ++++L ILVG +L+ DL L + HP + DT F ++ +P
Sbjct: 267 EDFKTVQKEVADILN-GRILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFRQR-VKNARP 324
Query: 481 KLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKLK 517
LK+L L D+Q Q HCS +DA AA+RL L+
Sbjct: 325 SLKLLCDRLL--DVQVQTSEHCSIQDAQAAMRLYTLE 359
Score = 61 (26.5 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 22/102 (21%), Positives = 37/102 (36%)
Query: 160 PSSYTTSLVHELVMSSRHMEAQDMTPSKETSLPSNVTNSTHSPSQTIKSAFPIGTQPVRS 219
PS+ T + L+ + T + P + P T S P+ +
Sbjct: 47 PSAQTNTKKQHLLKEGNSQQVPAGTGDENVLKPKSTNKKDRGP--TAHSP-PLAKVKSKK 103
Query: 220 ANTESLSATSQNTKSQSQNIESAFQNTKSQSQYIESAFQNTK 261
A T+ S K ++ NIE + K + + E+A Q K
Sbjct: 104 AATDKNSKPKHTEKRKNGNIEKEKSDVKHKKRKAEAAVQQPK 145
>RGD|1306220 [details] [associations]
symbol:Rexo4 "REX4, RNA exonuclease 4 homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
RGD:1306220 GO:GO:0005730 GO:GO:0003676 GO:GO:0004527
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 KO:K01175 CTD:57109
HOGENOM:HOG000231626 HOVERGEN:HBG000999 OrthoDB:EOG4VX263
EMBL:BC161820 IPI:IPI00563200 RefSeq:NP_001029056.1
UniGene:Rn.116879 Ensembl:ENSRNOT00000042289 GeneID:311826
KEGG:rno:311826 UCSC:RGD:1306220 NextBio:664229
Genevestigator:B1WBN4 Uniprot:B1WBN4
Length = 409
Score = 199 (75.1 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 56/153 (36%), Positives = 83/153 (54%)
Query: 367 LDCEMCKTS--NDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVA 424
LDCEM +++ RV++V++ VY+ VKP P+T+Y TA SGI L
Sbjct: 233 LDCEMVGVGPKGEESIAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQ-G 291
Query: 425 TRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPY--VIDTSVI--FNTTGIRTHKP 480
E V+K ++ +L ILVG +L DL L + HP + DT F + +++ +P
Sbjct: 292 EEFEVVKKEVAAMLK-GRILVGHALRNDLKVLFLEHPKKKIRDTQKFKPFRSL-VKSARP 349
Query: 481 KLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRL 513
LK L+ LGL +Q + HCS +DA AA+RL
Sbjct: 350 SLKQLSEKILGLRVQQAE--HCSVQDAQAAMRL 380
>SGD|S000004097 [details] [associations]
symbol:REX3 "RNA exonuclease" species:4932 "Saccharomyces
cerevisiae" [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IMP] [GO:0043628 "ncRNA
3'-end processing" evidence=IMP] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000467
"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IGI] [GO:0034476 "U5 snRNA 3'-end processing"
evidence=IGI] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
SGD:S000004097 Pfam:PF00929 GO:GO:0005634 GO:GO:0005737
GO:GO:0003676 EMBL:BK006945 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:X89514 EMBL:U53878 EMBL:U53876 GO:GO:0000175
GO:GO:0000467 GO:GO:0034476 OrthoDB:EOG48KVM8 EMBL:Z73279
EMBL:Z73280 PIR:S64944 RefSeq:NP_013208.1 ProteinModelPortal:Q12090
SMR:Q12090 STRING:Q12090 EnsemblFungi:YLR107W GeneID:850797
KEGG:sce:YLR107W CYGD:YLR107w HOGENOM:HOG000154095 OMA:DCEMAFT
NextBio:967014 Genevestigator:Q12090 GermOnline:YLR107W
Uniprot:Q12090
Length = 404
Score = 194 (73.4 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 56/177 (31%), Positives = 93/177 (52%)
Query: 344 KFSKYINTKEVYAEVTPTSPLYGLDCEMCKTSNDQNELTRVTLVDE-QENVVYESLVKPY 402
K SK+ +T ++ + LDCEM TS E+ R+T+VD +++ +++P
Sbjct: 227 KISKFSSTDDIDG----VENVLSLDCEMAFTSLGY-EMIRLTIVDFFTGKTLFDHVIQPI 281
Query: 403 NPITNYLTAYSGITRALLAPVATRLEHVQKILSE-LLPPDAILVGQSLNCDLHALKMMHP 461
I + + +SG+ T E + LSE L+ ++IL+G L DL+ +++ H
Sbjct: 282 GDIVDLNSDFSGVHEIDRTNCPTYKEALDVFLSENLINKNSILIGHGLENDLNVMRLFHN 341
Query: 462 YVIDTSVIFNTTGIRTHKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKLKL 518
VIDT+++++ T K LK L L IQN G H S +DAIA + +VK+K+
Sbjct: 342 KVIDTAILYSRTKF---KVSLKNLAFEVLSRKIQN--GEHDSSQDAIATMDVVKVKI 393
Score = 45 (20.9 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 19/83 (22%), Positives = 38/83 (45%)
Query: 208 SAFPIGTQPVRSA--NTESL-SATSQNTKSQSQN-IESAFQNTK--SQSQYIESAFQNTK 261
S I +P++ A + S+ +A S TKS++ +++ ++K ++ YI QN
Sbjct: 85 SKIKINGRPLKGAKPHLSSIGNANSITTKSKAMEALKALILDSKVLEKNGYIVKEMQNKT 144
Query: 262 SQPQNIQLASQSTKSKSEIPLND 284
+ + QL + + S D
Sbjct: 145 NDDNSTQLYAPCLRCSSNFKKTD 167
>TAIR|locus:2086320 [details] [associations]
symbol:AT3G15080 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 eggNOG:COG0847 HOGENOM:HOG000182422
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AY087954 EMBL:BT024904
EMBL:EU682310 EMBL:AK228883 IPI:IPI00522165 RefSeq:NP_566499.1
UniGene:At.39112 ProteinModelPortal:Q8LAA0 STRING:Q8LAA0
PaxDb:Q8LAA0 PRIDE:Q8LAA0 EnsemblPlants:AT3G15080.1 GeneID:820738
KEGG:ath:AT3G15080 TAIR:At3g15080 InParanoid:Q8LAA0 OMA:CPIEDAR
PhylomeDB:Q8LAA0 ProtClustDB:CLSN2688390 Genevestigator:Q8LAA0
Uniprot:Q8LAA0
Length = 275
Score = 189 (71.6 bits), Expect = 9.0e-13, P = 9.0e-13
Identities = 58/150 (38%), Positives = 80/150 (53%)
Query: 367 LDCEMCKTSND-QNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVAT 425
+DCEM S ++ L RVTLV++ NV+Y+ V+P + ++ T+ SGI L A
Sbjct: 86 MDCEMVGVSQGTKSALGRVTLVNKWGNVLYDEFVRPVEHVVDFRTSISGIRPRDLRK-AK 144
Query: 426 RLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPY--VIDTSVIFNTTGIRTHKPKLK 483
Q ++EL+ ILVG +L+ DL AL + HP + DT +T K LK
Sbjct: 145 DFRVAQTKVAELIK-GKILVGHALHNDLKALLLTHPKKDIRDTGEYQPFLKGKTRK-SLK 202
Query: 484 MLTSHFLGLDIQNQDGGHCSKEDAIAALRL 513
L S LG DIQN G HC +DA AA+ L
Sbjct: 203 HLASEILGADIQN--GEHCPIDDARAAMML 230
>UNIPROTKB|Q8WTP8 [details] [associations]
symbol:AEN "Apoptosis-enhancing nuclease" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0010212 "response to ionizing radiation"
evidence=IDA] [GO:0004527 "exonuclease activity" evidence=IDA]
[GO:0042771 "intrinsic apoptotic signaling pathway in response to
DNA damage by p53 class mediator" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005654 GO:GO:0005730
GO:GO:0042771 GO:GO:0003676 GO:GO:0010212 GO:GO:0004527
EMBL:AF327352 EMBL:AC013489 EMBL:CH471101 EMBL:BC005164
EMBL:BC014407 EMBL:BC020988 EMBL:AK022546 IPI:IPI00074083
IPI:IPI00141525 RefSeq:NP_073604.3 UniGene:Hs.436102
ProteinModelPortal:Q8WTP8 SMR:Q8WTP8 STRING:Q8WTP8
PhosphoSite:Q8WTP8 DMDM:296434390 PRIDE:Q8WTP8 DNASU:64782
Ensembl:ENST00000332810 Ensembl:ENST00000379231 GeneID:64782
KEGG:hsa:64782 UCSC:uc002bmt.2 CTD:64782 GeneCards:GC15P089164
H-InvDB:HIX0012556 HGNC:HGNC:25722 HPA:HPA048599 MIM:610177
neXtProt:NX_Q8WTP8 PharmGKB:PA162375720 eggNOG:COG0847
HOGENOM:HOG000182422 HOVERGEN:HBG100435 OMA:HKRKSRQ
OrthoDB:EOG4P8FJM PhylomeDB:Q8WTP8 GenomeRNAi:64782 NextBio:66818
ArrayExpress:Q8WTP8 Bgee:Q8WTP8 CleanEx:HS_AEN
Genevestigator:Q8WTP8 InterPro:IPR013520 SUPFAM:SSF53098
Uniprot:Q8WTP8
Length = 325
Score = 192 (72.6 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 57/163 (34%), Positives = 82/163 (50%)
Query: 362 SPLYGLDCEMCKTS--NDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRAL 419
S +DCEM T +EL R ++V NV+Y+ ++P PI +Y T +SGITR
Sbjct: 108 SKCVAIDCEMVGTGPRGRVSELARCSIVSYHGNVLYDKYIRPEMPIADYRTRWSGITRQH 167
Query: 420 LAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHP--YVIDTSVIFN---TTG 474
+ A + QK + +LL ++VG +L+ D ALK +HP DT+ + N G
Sbjct: 168 MRK-AVPFQVAQKEILKLLK-GKVVVGHALHNDFQALKYVHPRSQTRDTTYVPNFLSEPG 225
Query: 475 IRTH-KPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKL 516
+ T + LK L L IQ GH S EDA A+ L +L
Sbjct: 226 LHTRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRL 268
>UNIPROTKB|E2R2F5 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016605 "PML body" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008310 "single-stranded DNA
specific 3'-5' exodeoxyribonuclease activity" evidence=IEA]
[GO:0006401 "RNA catabolic process" evidence=IEA] [GO:0000738 "DNA
catabolic process, exonucleolytic" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0016605 GO:GO:0003676
GO:GO:0009615 GO:GO:0006401 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0000175 GO:GO:0000738 GO:GO:0008310
Ensembl:ENSCAFT00000018291 Uniprot:E2R2F5
Length = 183
Score = 174 (66.3 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 58/161 (36%), Positives = 82/161 (50%)
Query: 367 LDCEMCKTSNDQNE-LTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGIT-RAL--LAP 422
+DCEM + L R +LVD V+Y+ ++P IT+Y T SGIT R + P
Sbjct: 10 IDCEMVGVGPSRKSGLARCSLVDLHGTVLYDKFIRPEGEITDYRTQVSGITPRHMEQATP 69
Query: 423 VAT-RLEHVQKILSELLPPDAILVGQSLNCDLHALKM-MHPYVI-DTS---VIFNTTGIR 476
A RLE +Q + +L+ VG L D ALK M Y I DTS +++ ++
Sbjct: 70 FAVARLEILQLLEGKLV------VGHDLKHDFQALKENMSNYAIYDTSTDRLLWREANLQ 123
Query: 477 T-HKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKL 516
+ L++L+ LG IQN GH S EDA AA+ L +L
Sbjct: 124 NCRRVSLRVLSERLLGRRIQNSRFGHSSVEDAKAAMELYRL 164
>UNIPROTKB|F6X5D6 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 CTD:3669 KO:K12579 OMA:ARCSLVD
Ensembl:ENSCAFT00000018291 EMBL:AAEX03002317 RefSeq:XP_545847.2
GeneID:488729 KEGG:cfa:488729 Uniprot:F6X5D6
Length = 171
Score = 174 (66.3 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 58/161 (36%), Positives = 82/161 (50%)
Query: 367 LDCEMCKTSNDQNE-LTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGIT-RAL--LAP 422
+DCEM + L R +LVD V+Y+ ++P IT+Y T SGIT R + P
Sbjct: 10 IDCEMVGVGPSRKSGLARCSLVDLHGTVLYDKFIRPEGEITDYRTQVSGITPRHMEQATP 69
Query: 423 VAT-RLEHVQKILSELLPPDAILVGQSLNCDLHALKM-MHPYVI-DTS---VIFNTTGIR 476
A RLE +Q + +L+ VG L D ALK M Y I DTS +++ ++
Sbjct: 70 FAVARLEILQLLEGKLV------VGHDLKHDFQALKENMSNYAIYDTSTDRLLWREANLQ 123
Query: 477 T-HKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKL 516
+ L++L+ LG IQN GH S EDA AA+ L +L
Sbjct: 124 NCRRVSLRVLSERLLGRRIQNSRFGHSSVEDAKAAMELYRL 164
>RGD|1306407 [details] [associations]
symbol:Isg20 "interferon stimulated exonuclease gene 20"
species:10116 "Rattus norvegicus" [GO:0000175
"3'-5'-exoribonuclease activity" evidence=ISO] [GO:0000738 "DNA
catabolic process, exonucleolytic" evidence=ISO] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006401 "RNA catabolic process" evidence=ISO] [GO:0008310
"single-stranded DNA specific 3'-5' exodeoxyribonuclease activity"
evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
[GO:0016605 "PML body" evidence=ISO] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 RGD:1306407
GO:GO:0016605 GO:GO:0003676 GO:GO:0009615 GO:GO:0006401
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 GO:GO:0000175
GO:GO:0000738 GO:GO:0008310 CTD:3669 HOVERGEN:HBG052149 KO:K12579
OrthoDB:EOG4M91SN EMBL:BC086557 IPI:IPI00364365
RefSeq:NP_001008510.1 UniGene:Rn.16103 SMR:Q5RJP5
Ensembl:ENSRNOT00000024826 GeneID:293052 KEGG:rno:293052
NextBio:635263 Genevestigator:Q5RJP5 Uniprot:Q5RJP5
Length = 181
Score = 171 (65.3 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 55/163 (33%), Positives = 83/163 (50%)
Query: 362 SP-LYGLDCEMCKTSNDQ-NELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRAL 419
SP + +DCEM + + L R ++V+ V+Y+ ++P IT+Y T SGIT
Sbjct: 4 SPEVVAMDCEMVGLGPQRVSGLARCSIVNVHSAVLYDKYIQPEGEITDYRTQVSGITPQH 63
Query: 420 LAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKM-MHPYVI-DTS---VIFNTTG 474
+A E +IL +LL ++VG L D ALK M Y I DTS ++++
Sbjct: 64 MARATPFAEARLEIL-QLLK-GKLVVGHDLKHDFSALKEDMRKYTIYDTSTDMLLWHEAK 121
Query: 475 IRTH-KPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKL 516
+ + + L++L L IQN GHCS EDA A + L K+
Sbjct: 122 LHCYSRVSLRLLCKRLLHKSIQNNWRGHCSVEDARATMELYKI 164
>UNIPROTKB|F1SRT3 [details] [associations]
symbol:AEN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005654
GO:GO:0005730 GO:GO:0042771 GO:GO:0003676 GO:GO:0010212
GO:GO:0004527 OMA:HKRKSRQ InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:FP017226 RefSeq:XP_003121906.1
UniGene:Ssc.43796 Ensembl:ENSSSCT00000005624 GeneID:100522657
KEGG:ssc:100522657 Uniprot:F1SRT3
Length = 325
Score = 188 (71.2 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 56/163 (34%), Positives = 83/163 (50%)
Query: 362 SPLYGLDCEMCKTS--NDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRAL 419
S +DCEM T +EL R ++V +V+Y+ ++P PI +Y T +SGITR
Sbjct: 108 SKCVAIDCEMVGTGPRGRVSELARCSVVSYYGDVLYDKYIRPEMPIVDYRTRWSGITRQH 167
Query: 420 LAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHP--YVIDTSVIFNTT---G 474
+ A + QK + +LL ++VG +L+ D ALK +HP DT+ + N G
Sbjct: 168 MRK-AIPFQVAQKEILKLLK-GKVVVGHALHNDFQALKYVHPRGQTRDTTYVPNLLSQPG 225
Query: 475 IRTH-KPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKL 516
+ T + LK L L IQ GH S EDA+ A+ L +L
Sbjct: 226 LHTRTRVSLKDLALQLLHKKIQVGQHGHSSVEDAVTAMELYRL 268
>UNIPROTKB|H9L3P1 [details] [associations]
symbol:H9L3P1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AADN02034596 EMBL:AADN02034597
Ensembl:ENSGALT00000040830 Uniprot:H9L3P1
Length = 327
Score = 188 (71.2 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 58/168 (34%), Positives = 80/168 (47%)
Query: 360 PTSPLYGLDCEMCKTSND--QNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITR 417
P S L +DCEM T + L R ++V + +V+Y+S V+P PI +Y T +SGI +
Sbjct: 147 PPSKLVAIDCEMVGTGPGGCTSSLARCSIVGYEGDVLYDSYVRPTEPIVDYRTRWSGIRK 206
Query: 418 ALLA---PVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVI--DTSVI--F 470
+ P + KILS ++VG +++ D ALK HP + DTS I
Sbjct: 207 KHMVNAVPFCKAQREILKILS-----GKVVVGHAVHNDFKALKYSHPKELTRDTSKIPLL 261
Query: 471 NTTGIRTHKP--KLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKL 516
N G LK L L DIQ GHCS EDA + L K+
Sbjct: 262 NQKGGFPENVAISLKRLAKELLHKDIQVGKSGHCSVEDARTTMELYKV 309
>UNIPROTKB|H9L3P2 [details] [associations]
symbol:H9L3P2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AADN02034596 EMBL:AADN02034597
Ensembl:ENSGALT00000040831 OMA:PTEPIVD Uniprot:H9L3P2
Length = 328
Score = 188 (71.2 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 58/168 (34%), Positives = 80/168 (47%)
Query: 360 PTSPLYGLDCEMCKTSND--QNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITR 417
P S L +DCEM T + L R ++V + +V+Y+S V+P PI +Y T +SGI +
Sbjct: 148 PPSKLVAIDCEMVGTGPGGCTSSLARCSIVGYEGDVLYDSYVRPTEPIVDYRTRWSGIRK 207
Query: 418 ALLA---PVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVI--DTSVI--F 470
+ P + KILS ++VG +++ D ALK HP + DTS I
Sbjct: 208 KHMVNAVPFCKAQREILKILS-----GKVVVGHAVHNDFKALKYSHPKELTRDTSKIPLL 262
Query: 471 NTTGIRTHKP--KLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKL 516
N G LK L L DIQ GHCS EDA + L K+
Sbjct: 263 NQKGGFPENVAISLKRLAKELLHKDIQVGKSGHCSVEDARTTMELYKV 310
>UNIPROTKB|J9PA78 [details] [associations]
symbol:AEN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 CTD:64782 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 EMBL:AAEX03002316
EMBL:AAEX03002317 RefSeq:XP_545846.2 Ensembl:ENSCAFT00000047692
GeneID:488728 KEGG:cfa:488728 Uniprot:J9PA78
Length = 324
Score = 185 (70.2 bits), Expect = 9.9e-12, P = 9.9e-12
Identities = 55/163 (33%), Positives = 82/163 (50%)
Query: 362 SPLYGLDCEMCKTS--NDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRAL 419
S +DCEM T +EL R ++V +V+Y+ ++P PI +Y T +SG+TR
Sbjct: 108 SKCVAIDCEMVGTGPRGRVSELARCSVVSYHGDVLYDKYIRPEMPIVDYRTRWSGVTRQH 167
Query: 420 LAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHP--YVIDTSVIFNTT---G 474
+ A + QK + +LL ++VG +L+ D ALK +HP DT+ + N G
Sbjct: 168 MRK-AIPFQVAQKEILKLLK-GKVVVGHALHNDFQALKYVHPRSQTRDTTYVPNLLHQPG 225
Query: 475 IRTH-KPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKL 516
+ T + LK L L IQ GH S EDA A+ L +L
Sbjct: 226 LHTRTRVSLKDLALQLLHKKIQAGQHGHSSVEDATTAMELYRL 268
>UNIPROTKB|F1PWV6 [details] [associations]
symbol:AEN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042771 "intrinsic apoptotic signaling
pathway in response to DNA damage by p53 class mediator"
evidence=IEA] [GO:0010212 "response to ionizing radiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0005654 GO:GO:0005730 GO:GO:0042771 GO:GO:0003676
GO:GO:0010212 GO:GO:0004527 OMA:HKRKSRQ InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 EMBL:AAEX03002316
EMBL:AAEX03002317 Ensembl:ENSCAFT00000018286 Uniprot:F1PWV6
Length = 336
Score = 185 (70.2 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 55/163 (33%), Positives = 82/163 (50%)
Query: 362 SPLYGLDCEMCKTS--NDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRAL 419
S +DCEM T +EL R ++V +V+Y+ ++P PI +Y T +SG+TR
Sbjct: 108 SKCVAIDCEMVGTGPRGRVSELARCSVVSYHGDVLYDKYIRPEMPIVDYRTRWSGVTRQH 167
Query: 420 LAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHP--YVIDTSVIFNTT---G 474
+ A + QK + +LL ++VG +L+ D ALK +HP DT+ + N G
Sbjct: 168 MRK-AIPFQVAQKEILKLLK-GKVVVGHALHNDFQALKYVHPRSQTRDTTYVPNLLHQPG 225
Query: 475 IRTH-KPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKL 516
+ T + LK L L IQ GH S EDA A+ L +L
Sbjct: 226 LHTRTRVSLKDLALQLLHKKIQAGQHGHSSVEDATTAMELYRL 268
>MGI|MGI:1915298 [details] [associations]
symbol:Aen "apoptosis enhancing nuclease" species:10090 "Mus
musculus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=ISO] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0010212 "response to
ionizing radiation" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=ISO]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
MGI:MGI:1915298 GO:GO:0005654 GO:GO:0005730 GO:GO:0042771
GO:GO:0003676 GO:GO:0010212 GO:GO:0004527 CTD:64782 eggNOG:COG0847
HOGENOM:HOG000182422 HOVERGEN:HBG100435 OMA:HKRKSRQ
OrthoDB:EOG4P8FJM InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AK090056
EMBL:AK012555 EMBL:AK031972 EMBL:AK165708 EMBL:AK166806
EMBL:AK167042 EMBL:AK167658 EMBL:BC022614 IPI:IPI00857428
IPI:IPI00990849 RefSeq:NP_001156411.1 RefSeq:NP_080807.3
UniGene:Mm.34109 ProteinModelPortal:Q9CZI9 SMR:Q9CZI9
PhosphoSite:Q9CZI9 PRIDE:Q9CZI9 Ensembl:ENSMUST00000107421
Ensembl:ENSMUST00000107423 Ensembl:ENSMUST00000107425 GeneID:68048
KEGG:mmu:68048 UCSC:uc009hxp.1 UCSC:uc009hxq.1
GeneTree:ENSGT00520000055542 InParanoid:Q9CZI9 NextBio:326308
Bgee:Q9CZI9 Genevestigator:Q9CZI9 Uniprot:Q9CZI9
Length = 336
Score = 184 (69.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 60/176 (34%), Positives = 88/176 (50%)
Query: 352 KEVYAEVTPTSPL--YGLDCEMCKTSNDQ--NELTRVTLVDEQENVVYESLVKPYNPITN 407
K V E P+ +DCEM T +EL R ++V +V+Y+ ++P PI +
Sbjct: 95 KSVPREAPRPGPIKCVAIDCEMVGTGPQGRVSELARCSVVSYSGDVLYDKYIRPEMPIVD 154
Query: 408 YLTAYSGITRALLAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHP--YVID 465
Y T +SGITR + A + QK + +LL ++VG +L+ D ALK +HP D
Sbjct: 155 YRTRWSGITRQHMHK-AIPFQVAQKEILKLLK-GKVVVGHALHNDFQALKYVHPRSQTRD 212
Query: 466 TSVIFNTTG-----IRTHKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKL 516
T+ + N IRT + LK L + L IQ GH S EDA+ A+ L +L
Sbjct: 213 TTYVPNLLSQPSSLIRT-RVSLKDLALNLLHKKIQVGHQGHSSVEDAMTAMELYQL 267
>UNIPROTKB|F1MZX4 [details] [associations]
symbol:LOC614749 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005654
GO:GO:0005730 GO:GO:0042771 GO:GO:0003676 GO:GO:0010212
GO:GO:0004527 OMA:HKRKSRQ InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:DAAA02052106 IPI:IPI00714615
Ensembl:ENSBTAT00000023454 Uniprot:F1MZX4
Length = 325
Score = 183 (69.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 56/163 (34%), Positives = 83/163 (50%)
Query: 362 SPLYGLDCEMCKTS--NDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRAL 419
S +DCEM T +EL R ++V V+Y+ ++P PI +Y T +SGITR
Sbjct: 108 SKCVAIDCEMVGTGPRGRVSELARCSVVSYHGEVLYDKYIRPEMPIVDYRTRWSGITRQH 167
Query: 420 LAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHP--YVIDT-SV--IFNTTG 474
+ A + QK + +LL ++VG +L+ D ALK +HP DT SV + + G
Sbjct: 168 MRK-AIPFQVAQKEILKLLK-GKVVVGHALHNDFQALKYIHPRGQTRDTTSVPSLLSQPG 225
Query: 475 IRT-HKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKL 516
+ ++ LK L L IQ GH S EDA+ A+ L +L
Sbjct: 226 LHVRNRVSLKDLALQLLHKKIQVGQHGHSSVEDAVTAMELYRL 268
>RGD|1305051 [details] [associations]
symbol:Aen "apoptosis enhancing nuclease" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA;ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=IEA;ISO;ISS] [GO:0005730 "nucleolus" evidence=IEA;ISO;ISS]
[GO:0010212 "response to ionizing radiation" evidence=IEA;ISO;ISS]
[GO:0042771 "intrinsic apoptotic signaling pathway in response to
DNA damage by p53 class mediator" evidence=IEA;ISO;ISS]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
RGD:1305051 GO:GO:0005654 GO:GO:0005730 GO:GO:0042771 EMBL:CH473980
GO:GO:0003676 GO:GO:0010212 GO:GO:0004527 CTD:64782 eggNOG:COG0847
HOGENOM:HOG000182422 HOVERGEN:HBG100435 OrthoDB:EOG4P8FJM
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00520000055542
EMBL:BC166435 IPI:IPI00365766 RefSeq:NP_001101957.1
UniGene:Rn.46887 ProteinModelPortal:B2GUW6 SMR:B2GUW6 PRIDE:B2GUW6
Ensembl:ENSRNOT00000064438 GeneID:361594 KEGG:rno:361594
UCSC:RGD:1305051 NextBio:676841 Genevestigator:B2GUW6
Uniprot:B2GUW6
Length = 332
Score = 183 (69.5 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 60/182 (32%), Positives = 93/182 (51%)
Query: 346 SKYINTKEVYAEVTPTS-PL-Y-GLDCEMCKTSNDQ--NELTRVTLVDEQENVVYESLVK 400
SK + +K P+S P Y +DCEM T +EL R ++V +V+Y+ ++
Sbjct: 84 SKGLCSKRPVPREAPSSGPSKYVAIDCEMVGTGPQGRVSELARCSVVSYSGDVLYDKYIR 143
Query: 401 PYNPITNYLTAYSGITRALLAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMH 460
P PI +Y T +SGITR + A + QK + +LL ++VG +L+ D ALK +H
Sbjct: 144 PEMPIVDYRTRWSGITRQHMHK-AIPFQVAQKEILKLLK-GKVVVGHALHNDFQALKYVH 201
Query: 461 P--YVIDTSVIFNT----TGIRTHKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLV 514
P + DT+ + N + + + LK L + L IQ GH S EDA+ A+ L
Sbjct: 202 PGSQIRDTTYVPNLLSQPSSLTRARVSLKDLALNLLHKKIQVGHHGHSSVEDAMTAMELY 261
Query: 515 KL 516
+L
Sbjct: 262 QL 263
>UNIPROTKB|E1BNM5 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016605 "PML body" evidence=IEA] [GO:0009615 "response
to virus" evidence=IEA] [GO:0008310 "single-stranded DNA specific
3'-5' exodeoxyribonuclease activity" evidence=IEA] [GO:0006401 "RNA
catabolic process" evidence=IEA] [GO:0000738 "DNA catabolic
process, exonucleolytic" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0016605 GO:GO:0003676
GO:GO:0009615 GO:GO:0006401 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 GO:GO:0000175 GO:GO:0000738
GO:GO:0008310 CTD:3669 KO:K12579 EMBL:DAAA02052106 IPI:IPI00695516
RefSeq:XP_002696560.1 RefSeq:XP_583075.1 UniGene:Bt.22275
ProteinModelPortal:E1BNM5 Ensembl:ENSBTAT00000019639 GeneID:506604
KEGG:bta:506604 NextBio:20867677 Uniprot:E1BNM5
Length = 171
Score = 165 (63.1 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 55/167 (32%), Positives = 86/167 (51%)
Query: 361 TSPLYGLDCEMCKTSN-DQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRAL 419
++ + +DCEM ++ L R +LVD +V+Y+ ++P IT+Y T SGIT
Sbjct: 4 SADVVAMDCEMVGLGPFRESGLARCSLVDYHGSVLYDKFIRPEGDITDYRTPVSGITARN 63
Query: 420 L---APVAT-RLEHVQKILSELLPPDAILVGQSLNCDLHALKM-MHPYVI-DTSV---IF 470
+ P A RLE +Q + +L+ VG L D ALK M Y I DT+ ++
Sbjct: 64 MEGATPFAVARLEILQVLKGKLV------VGHDLKHDFKALKENMSDYAIYDTAADRRLW 117
Query: 471 NTTGIR-THKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKL 516
G++ + L++L+ LG IQ+ GH S EDA AA+ L ++
Sbjct: 118 REAGLQYCRRVSLRVLSQRLLGRRIQDSVLGHNSVEDARAAMELYRI 164
>UNIPROTKB|G3N2Q8 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016605 "PML body" evidence=IEA] [GO:0009615 "response
to virus" evidence=IEA] [GO:0008310 "single-stranded DNA specific
3'-5' exodeoxyribonuclease activity" evidence=IEA] [GO:0006401 "RNA
catabolic process" evidence=IEA] [GO:0000738 "DNA catabolic
process, exonucleolytic" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0016605 GO:GO:0003676
GO:GO:0009615 GO:GO:0006401 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 GO:GO:0000175 GO:GO:0000738
GO:GO:0008310 OMA:ARCSLVD EMBL:DAAA02052106
Ensembl:ENSBTAT00000065058 Uniprot:G3N2Q8
Length = 181
Score = 165 (63.1 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 55/167 (32%), Positives = 86/167 (51%)
Query: 361 TSPLYGLDCEMCKTSN-DQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRAL 419
++ + +DCEM ++ L R +LVD +V+Y+ ++P IT+Y T SGIT
Sbjct: 4 SADVVAMDCEMVGLGPFRESGLARCSLVDYHGSVLYDKFIRPEGDITDYRTPVSGITARN 63
Query: 420 L---APVAT-RLEHVQKILSELLPPDAILVGQSLNCDLHALKM-MHPYVI-DTSV---IF 470
+ P A RLE +Q + +L+ VG L D ALK M Y I DT+ ++
Sbjct: 64 MEGATPFAVARLEILQVLKGKLV------VGHDLKHDFKALKENMSDYAIYDTAADRRLW 117
Query: 471 NTTGIR-THKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKL 516
G++ + L++L+ LG IQ+ GH S EDA AA+ L ++
Sbjct: 118 REAGLQYCRRVSLRVLSQRLLGRRIQDSVLGHNSVEDARAAMELYRI 164
>UNIPROTKB|F8WG03 [details] [associations]
symbol:Aen "Apoptosis-enhancing nuclease" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 RGD:1305051 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 IPI:IPI00949441
Ensembl:ENSRNOT00000024962 OMA:GMVPREV Uniprot:F8WG03
Length = 355
Score = 183 (69.5 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 60/182 (32%), Positives = 93/182 (51%)
Query: 346 SKYINTKEVYAEVTPTS-PL-Y-GLDCEMCKTSNDQ--NELTRVTLVDEQENVVYESLVK 400
SK + +K P+S P Y +DCEM T +EL R ++V +V+Y+ ++
Sbjct: 107 SKGLCSKRPVPREAPSSGPSKYVAIDCEMVGTGPQGRVSELARCSVVSYSGDVLYDKYIR 166
Query: 401 PYNPITNYLTAYSGITRALLAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMH 460
P PI +Y T +SGITR + A + QK + +LL ++VG +L+ D ALK +H
Sbjct: 167 PEMPIVDYRTRWSGITRQHMHK-AIPFQVAQKEILKLLK-GKVVVGHALHNDFQALKYVH 224
Query: 461 P--YVIDTSVIFNT----TGIRTHKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLV 514
P + DT+ + N + + + LK L + L IQ GH S EDA+ A+ L
Sbjct: 225 PGSQIRDTTYVPNLLSQPSSLTRARVSLKDLALNLLHKKIQVGHHGHSSVEDAMTAMELY 284
Query: 515 KL 516
+L
Sbjct: 285 QL 286
>UNIPROTKB|E2R7T9 [details] [associations]
symbol:REXO4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:QKEVAEM EMBL:AAEX03006772
Ensembl:ENSCAFT00000035775 Uniprot:E2R7T9
Length = 447
Score = 183 (69.5 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 53/153 (34%), Positives = 82/153 (53%)
Query: 367 LDCEMCKTS--NDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVA 424
+DCEM +++ RV++V++ VY+ VKP P+T+Y TA SGI L
Sbjct: 248 MDCEMVGAGPKGEESVAARVSIVNQYGKCVYDKYVKPTQPVTDYRTAVSGIRPENLKQ-G 306
Query: 425 TRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPY--VIDTSVI--FNTTGIRTHKP 480
+ E VQK ++++L ILVG +L+ DL L + HP + DT F + +++ +P
Sbjct: 307 EKFEVVQKEVADMLK-GRILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFKSQ-VKSGRP 364
Query: 481 KLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRL 513
LK+L LG+ +Q + HCS D I RL
Sbjct: 365 SLKLLAERILGIQVQQAE--HCS--DNIQLERL 393
>UNIPROTKB|E1C018 [details] [associations]
symbol:AEN "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0042771 "intrinsic apoptotic signaling pathway in response to
DNA damage by p53 class mediator" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005654
GO:GO:0005730 GO:GO:0042771 GO:GO:0003676 GO:GO:0010212
GO:GO:0004527 OMA:HKRKSRQ InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AADN02041516 IPI:IPI00577225
ProteinModelPortal:E1C018 Ensembl:ENSGALT00000010894
NextBio:20819091 Uniprot:E1C018
Length = 301
Score = 178 (67.7 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 59/173 (34%), Positives = 82/173 (47%)
Query: 357 EVTPTSP--LYGLDCEMCKTS--NDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAY 412
++ P P +DCEM T Q+EL R ++V +V+Y+ V P P+ ++ T +
Sbjct: 89 QLCPPRPNKYVAIDCEMVGTGPRGRQSELARCSIVSYDGDVIYDKYVLPLLPVVDFRTRW 148
Query: 413 SGITRALLA---PVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPY--VIDTS 467
SGIT+ + P E + KIL D I+VG +++ D ALK HP DTS
Sbjct: 149 SGITKRHMESAIPFRAAQEEILKILK-----DRIVVGHAIHNDFQALKYFHPKERTRDTS 203
Query: 468 VI--FNT-TGIRTH-KPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKL 516
I N G+ LK L H L IQ GH S EDA A+ L +L
Sbjct: 204 RIPLLNQRAGLPPGANASLKSLARHLLQKKIQVGCKGHSSVEDARTAMELYRL 256
>UNIPROTKB|Q5REE2 [details] [associations]
symbol:AEN "Apoptosis-enhancing nuclease" species:9601
"Pongo abelii" [GO:0004527 "exonuclease activity" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0010212 "response to ionizing radiation"
evidence=ISS] [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=ISS]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0005654 GO:GO:0005730 GO:GO:0042771 GO:GO:0003676
GO:GO:0010212 GO:GO:0004527 CTD:64782 HOGENOM:HOG000182422
HOVERGEN:HBG100435 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:CR857587
RefSeq:NP_001124869.1 UniGene:Pab.10699 ProteinModelPortal:Q5REE2
SMR:Q5REE2 GeneID:100171731 KEGG:pon:100171731 Uniprot:Q5REE2
Length = 325
Score = 179 (68.1 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 56/164 (34%), Positives = 82/164 (50%)
Query: 362 SPLYGLDCEMCKTS--NDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRAL 419
S +DCEM T +EL R ++V +V+Y+ ++P PI +Y T +SGITR
Sbjct: 108 SKCVAIDCEMVGTGPRGRVSELARCSIVSYHGDVLYDKYIRPEMPIVDYRTRWSGITRQH 167
Query: 420 LAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHP--YVIDTSVIFN-----T 472
+ A + QK + +LL ++VG +L+ D ALK +HP DT+ + N +
Sbjct: 168 MCK-AIPFQVAQKEILKLLK-GKVVVGHALHNDFQALKYVHPRSQTRDTTYVPNFLSEPS 225
Query: 473 TGIRTHKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKL 516
IR + LK L L IQ GH S EDA A+ L +L
Sbjct: 226 LHIRA-RVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRL 268
>UNIPROTKB|F1NQP7 [details] [associations]
symbol:Gga.48606 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:QKEVAEM EMBL:AADN02026478
IPI:IPI00594596 Ensembl:ENSGALT00000005016 Uniprot:F1NQP7
Length = 414
Score = 182 (69.1 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 55/157 (35%), Positives = 83/157 (52%)
Query: 367 LDCEMCKT--SNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVA 424
+DCEM S + + + RV++V+ +Y+ VKP +T+Y TA SGI L
Sbjct: 243 MDCEMVGVGPSGEDSIVARVSIVNLFGKCIYDKYVKPTEEVTDYRTAVSGIRPEHLK-TG 301
Query: 425 TRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPY--VIDTSVI--FNTTGIRTHKP 480
+ VQK ++++L ILVG +L+ DL L + HP + DT F ++ +P
Sbjct: 302 EDFKTVQKEVADILN-GRILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFRQR-VKNARP 359
Query: 481 KLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKLK 517
LK+L L D+Q Q HCS +DA AA+RL L+
Sbjct: 360 SLKLLCDRLL--DVQVQTSEHCSIQDAQAAMRLYTLE 394
Score = 41 (19.5 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 13/54 (24%), Positives = 26/54 (48%)
Query: 213 GTQPVRSANTESLSATSQNTKS-----QSQNIESAFQNTKSQSQYIESAFQNTK 261
G +P ++ ++ + T + KS ++ NIE + K + + E+A Q K
Sbjct: 130 GPKPRKAEEDKNWNGTKSDGKSCKEKRKNGNIEKEKSDVKHKKRKAEAAVQQPK 183
>TAIR|locus:2083153 [details] [associations]
symbol:AT3G50090 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003676 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AL132978 KO:K14570
HOGENOM:HOG000083886 IPI:IPI00524773 PIR:T45862 RefSeq:NP_190578.1
UniGene:At.53865 ProteinModelPortal:Q9SN09 SMR:Q9SN09
EnsemblPlants:AT3G50090.1 GeneID:824171 KEGG:ath:AT3G50090
TAIR:At3g50090 InParanoid:Q9SN09 OMA:FLHRIPH PhylomeDB:Q9SN09
ProtClustDB:CLSN2914751 Genevestigator:Q9SN09 Uniprot:Q9SN09
Length = 322
Score = 176 (67.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 48/158 (30%), Positives = 70/158 (44%)
Query: 364 LYGLDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPV 423
+ LDCEM + + RV VD V+ + VKP+ P+ +Y TA +G+T +
Sbjct: 75 MLALDCEMVLCEDGTEGVVRVGAVDRNLKVILDEFVKPHKPVVDYRTAITGVTAEDVQKA 134
Query: 424 ATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIFNTTGIRT-HKPKL 482
L +Q+ L L AIL+ HP VIDTS++F R +P L
Sbjct: 135 TLSLVDIQEKLRPFLSAGAILID-------------HPIVIDTSLVFKYPNSRKLRRPSL 181
Query: 483 KMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKLKLSK 520
L LG ++Q H DA AA++L + K
Sbjct: 182 NTLCMSVLGYEVQKAGVSHHCVHDAAAAMKLALAVIKK 219
>FB|FBgn0036405 [details] [associations]
symbol:CG6833 species:7227 "Drosophila melanogaster"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:AE014296 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AY060760 RefSeq:NP_001189105.1
RefSeq:NP_648689.1 UniGene:Dm.3871 SMR:Q9VUC3 IntAct:Q9VUC3
STRING:Q9VUC3 EnsemblMetazoa:FBtr0075774 EnsemblMetazoa:FBtr0302433
GeneID:39559 KEGG:dme:Dmel_CG6833 UCSC:CG6833-RA
FlyBase:FBgn0036405 InParanoid:Q9VUC3 OMA:GQEIQTG OrthoDB:EOG4PK0R4
GenomeRNAi:39559 NextBio:814273 Uniprot:Q9VUC3
Length = 290
Score = 172 (65.6 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 54/154 (35%), Positives = 78/154 (50%)
Query: 364 LYGLDCEMCKTSNDQNE--LTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLA 421
+ +DCEM ++ + L RV++V+ +V+ + VKP +T+Y T+ SGI +A
Sbjct: 117 ILAMDCEMVGVGHNTRDDMLARVSIVNRMGHVLLDKYVKPRKEVTDYRTSVSGIRPQDIA 176
Query: 422 PVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPY--VIDTSVIFNTTGI--RT 477
VQ + +L+ ILVG L DL L + HP+ + DTS + T
Sbjct: 177 N-GEDFAAVQNEVMKLIH-GRILVGHGLRNDLAVLGIRHPFHDIRDTSHYKPLCKLISNT 234
Query: 478 HKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAAL 511
H P LK LT LG +IQ G H S EDA AA+
Sbjct: 235 HTPSLKRLTKAVLGQEIQT--GEHNSVEDARAAM 266
Score = 39 (18.8 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 221 NTESLSATSQNTKSQSQNIESAFQNTKSQSQYIE 254
++ S SA ++NT ++N+ S N + +E
Sbjct: 22 SSRSGSANNKNTTDSTKNVVSPQHNQRKLQASME 55
>UNIPROTKB|I3LB04 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016605 "PML body" evidence=IEA] [GO:0009615 "response
to virus" evidence=IEA] [GO:0008310 "single-stranded DNA specific
3'-5' exodeoxyribonuclease activity" evidence=IEA] [GO:0006401 "RNA
catabolic process" evidence=IEA] [GO:0000738 "DNA catabolic
process, exonucleolytic" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0016605 GO:GO:0003676
GO:GO:0009615 GO:GO:0006401 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 GO:GO:0000175 GO:GO:0000738
GO:GO:0008310 OMA:ARCSLVD EMBL:FP017226 Ensembl:ENSSSCT00000024643
Uniprot:I3LB04
Length = 174
Score = 153 (58.9 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 54/161 (33%), Positives = 80/161 (49%)
Query: 367 LDCEMCKTSN-DQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALL---AP 422
+DCEM ++ L R +LVD V+Y+ ++P IT+Y T SGIT + P
Sbjct: 10 MDCEMVGLGPFRESGLARCSLVDFHGTVLYDKFIRPEGEITDYRTPVSGITARNMEGATP 69
Query: 423 VAT-RLEHVQKILSELLPPDAILVGQSLNCDLHALKM-MHPYVI-DTS---VIFNTTGIR 476
A RLE +Q + +L+ VG L D ALK M Y I DT+ +++ +
Sbjct: 70 FAVARLEILQLLKGKLV------VGHDLKHDFKALKENMSNYTIYDTAQDRLLWREADLH 123
Query: 477 -THKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKL 516
+ L++L+ LG IQ+ GH S EDA A + L +L
Sbjct: 124 YCRRVSLRLLSQRLLGRRIQDSVLGHNSVEDARATMELYRL 164
>MGI|MGI:2140076 [details] [associations]
symbol:Isg20l2 "interferon stimulated exonuclease gene
20-like 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 MGI:MGI:2140076
GO:GO:0005730 GO:GO:0003676 GO:GO:0042254 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 HOGENOM:HOG000182422
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00520000055542
KO:K01175 CTD:81875 HOVERGEN:HBG107986 OrthoDB:EOG4H4641
EMBL:AK053778 EMBL:AK155979 EMBL:BC098326 IPI:IPI00222565
RefSeq:NP_808331.1 UniGene:Mm.45744 ProteinModelPortal:Q3U1G5
SMR:Q3U1G5 PhosphoSite:Q3U1G5 PaxDb:Q3U1G5 PRIDE:Q3U1G5
Ensembl:ENSMUST00000055984 GeneID:229504 KEGG:mmu:229504
UCSC:uc008ptj.1 InParanoid:Q4KMV7 NextBio:379467 Bgee:Q3U1G5
CleanEx:MM_ISG20L2 Genevestigator:Q3U1G5 Uniprot:Q3U1G5
Length = 368
Score = 158 (60.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 54/165 (32%), Positives = 79/165 (47%)
Query: 364 LYGLDCEMCKTS--NDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLA 421
+ +DCEM T + L R ++V+ +V+Y+ V P I NY T +SGI + +
Sbjct: 194 MVAIDCEMVGTGPKGRVSSLARCSIVNYNGDVLYDEYVLPPCYIVNYRTRWSGIRKCHMV 253
Query: 422 ---PVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVI--DTSVIFNTTGIR 476
P T + KILS +++G +++ D AL+ HP + DTS I +
Sbjct: 254 NATPFKTARSQILKILS-----GKVVIGHAIHNDYKALQYFHPKSLTRDTSRI-PLLNRK 307
Query: 477 THKPK-----LKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKL 516
P+ LK LT L DIQ + GH S EDA A + L KL
Sbjct: 308 ADCPENVTLSLKHLTKKLLSRDIQVGNTGHSSVEDAQATMELYKL 352
Score = 52 (23.4 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 30/133 (22%), Positives = 58/133 (43%)
Query: 154 KMEVIPPSSYTTSLVH---ELVMSSRHMEAQDMTPSKETSLPSNVTNSTHSPSQTIKSAF 210
K+ PP TS V +++ + EA E S S +P+ + K+A
Sbjct: 52 KLNSEPPKKGETSRVDGILKILPCPKKKEAAASKRDSERSKDKKAPLSWLTPAPSKKTAS 111
Query: 211 PIGTQPV----RSANTESLSATSQNTKSQSQNIESAFQNTKSQSQYIESAFQNTKSQPQN 266
+ + +SA ++ S + +K +S + A +N+ +Q+Q S + +K +P
Sbjct: 112 VVSKIDLLGEFQSALPKTKSTQKKGSKKKSLKKKIATENS-TQAQ---SKDKGSKKKPLK 167
Query: 267 IQLASQSTKSKSE 279
ST+++SE
Sbjct: 168 KNAVPNSTQARSE 180
Score = 37 (18.1 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 244 QNTKSQSQYIES-AFQNTKSQPQNIQLASQSTKSKSEIPLNDES 286
Q + +++E F N K+QP N + +K SE P E+
Sbjct: 25 QRFVKKRRFLEQKGFLNKKNQPPN-----KVSKLNSEPPKKGET 63
>ZFIN|ZDB-GENE-120215-216 [details] [associations]
symbol:si:ch73-209e20.4 "si:ch73-209e20.4"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
ZFIN:ZDB-GENE-120215-216 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00520000055542
KO:K01175 EMBL:FP243383 IPI:IPI00613534 RefSeq:XP_002665913.1
ProteinModelPortal:F1QJP9 Ensembl:ENSDART00000121769
GeneID:100333127 KEGG:dre:100333127 Bgee:F1QJP9 Uniprot:F1QJP9
Length = 418
Score = 161 (61.7 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 51/153 (33%), Positives = 80/153 (52%)
Query: 367 LDCEMCKTS--NDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVA 424
+DCEM + + L RV+LV+ +Y+ VKP +T+Y TA SGI R
Sbjct: 236 MDCEMVGVGYKGEDSILARVSLVNHFGKCIYDKYVKPTEKVTDYRTAVSGI-RPDDIKNG 294
Query: 425 TRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHP--YVIDTSVI--FNTTGIRTHKP 480
++ VQK ++++L ILVG +++ DL L + HP + DT F +++ +P
Sbjct: 295 EDIKTVQKEVAQILK-GRILVGHAIHNDLKILLLDHPKKMIRDTQRYKPFRQK-VKSSRP 352
Query: 481 KLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRL 513
L+ L L ++Q Q G H S +DA A +RL
Sbjct: 353 ALRNLCRQIL--NVQVQQGEHSSVQDAQATMRL 383
Score = 50 (22.7 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 193 SNVTNSTHSPSQTIKSAFPIGTQPVRSANTESLSATSQNTKSQSQNIESAFQNTKSQSQY 252
+NV N PS S P + + A E++ A S+ +K ++ E N K QS +
Sbjct: 92 ANV-NGKQKPSSPKDSHKP--EKRFKKAK-ETVKAESEKSKRVEKDGE--LTNGKEQSGH 145
Query: 253 IESAFQNTKSQPQNIQLASQSTKSKSEIPLNDESKSATP 291
+ F+ K + ++ + + KSK+E +E K+A P
Sbjct: 146 KQ--FKAEKRKNKDGKEKGMNKKSKAE---EEEKKTAEP 179
>UNIPROTKB|Q96AZ6 [details] [associations]
symbol:ISG20 "Interferon-stimulated gene 20 kDa protein"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0008859 "exoribonuclease II activity"
evidence=IEA] [GO:0016605 "PML body" evidence=IDA] [GO:0006401 "RNA
catabolic process" evidence=IDA] [GO:0000738 "DNA catabolic
process, exonucleolytic" evidence=IDA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IDA] [GO:0008310
"single-stranded DNA specific 3'-5' exodeoxyribonuclease activity"
evidence=IDA] [GO:0009615 "response to virus" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0019221 "cytokine-mediated
signaling pathway" evidence=TAS] [GO:0060337 "type I
interferon-mediated signaling pathway" evidence=TAS]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
Reactome:REACT_6900 GO:GO:0060337 GO:GO:0046872 GO:GO:0016605
GO:GO:0008283 GO:GO:0051607 GO:GO:0003723 GO:GO:0009615
GO:GO:0006401 eggNOG:COG0847 HOGENOM:HOG000182422
InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0006364 GO:GO:0000175
GO:GO:0000738 GO:GO:0008310 GO:GO:0008859 EMBL:X89773 EMBL:U88964
EMBL:BT006952 EMBL:CR456942 EMBL:BC007922 EMBL:BC016341
IPI:IPI00514614 IPI:IPI00647246 RefSeq:NP_002192.2
UniGene:Hs.459265 PDB:1WLJ PDBsum:1WLJ ProteinModelPortal:Q96AZ6
SMR:Q96AZ6 STRING:Q96AZ6 PhosphoSite:Q96AZ6 DMDM:57012967
PaxDb:Q96AZ6 PRIDE:Q96AZ6 DNASU:3669 Ensembl:ENST00000306072
Ensembl:ENST00000560741 GeneID:3669 KEGG:hsa:3669 UCSC:uc002bmv.1
CTD:3669 GeneCards:GC15P089181 HGNC:HGNC:6130 MIM:604533
neXtProt:NX_Q96AZ6 PharmGKB:PA29930 HOVERGEN:HBG052149 KO:K12579
OMA:ARCSLVD OrthoDB:EOG4M91SN PhylomeDB:Q96AZ6 ChiTaRS:ISG20
EvolutionaryTrace:Q96AZ6 GenomeRNAi:3669 NextBio:14359 Bgee:Q96AZ6
CleanEx:HS_ISG20 Genevestigator:Q96AZ6 GermOnline:ENSG00000172183
Uniprot:Q96AZ6
Length = 181
Score = 147 (56.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 52/161 (32%), Positives = 80/161 (49%)
Query: 367 LDCEMCKTS-NDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLA---P 422
+DCEM + ++ L R +LV+ V+Y+ ++P IT+Y T SG+T + P
Sbjct: 10 MDCEMVGLGPHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVGATP 69
Query: 423 VAT-RLEHVQKILSELLPPDAILVGQSLNCDLHALKM-MHPYVI-DTS---VIFNTTGI- 475
A RLE +Q + +L+ VG L D ALK M Y I DTS +++ +
Sbjct: 70 FAVARLEILQLLKGKLV------VGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREAKLD 123
Query: 476 RTHKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKL 516
+ L++L+ L IQN GH S EDA A + L ++
Sbjct: 124 HCRRVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQI 164
>TAIR|locus:2066406 [details] [associations]
symbol:AT2G48100 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=RCA]
InterPro:IPR006055 InterPro:IPR007087 InterPro:IPR012337
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00479 Pfam:PF00929 EMBL:CP002685 GO:GO:0008270
GO:GO:0003676 GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:AC006072 EMBL:AF386965 EMBL:AY081469
IPI:IPI00546038 PIR:D84923 RefSeq:NP_001031560.1 RefSeq:NP_566124.1
RefSeq:NP_973715.1 UniGene:At.13478 ProteinModelPortal:Q9ZU79
SMR:Q9ZU79 EnsemblPlants:AT2G48100.1 EnsemblPlants:AT2G48100.2
EnsemblPlants:AT2G48100.3 GeneID:819422 KEGG:ath:AT2G48100
TAIR:At2g48100 InParanoid:Q9ZU79 OMA:MRLYKRM PhylomeDB:Q9ZU79
ProtClustDB:CLSN2917359 ArrayExpress:Q9ZU79 Genevestigator:Q9ZU79
Uniprot:Q9ZU79
Length = 344
Score = 165 (63.1 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 54/160 (33%), Positives = 81/160 (50%)
Query: 367 LDCEMCKTSNDQ--NELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVA 424
LDCEM D ++ V LVD+ ENV++ + V+P P+T+Y +G+T+ L
Sbjct: 135 LDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGLTKEDLKD-G 193
Query: 425 TRLEHV-QKILSELL--PPDA----ILVGQSLNCDLHALKMMHP-YVI-DTSVIFNTTGI 475
LEHV +++ S L D +LVG L D+ LK+ +P +++ DT+
Sbjct: 194 MPLEHVRERVFSFLCGGQNDGAGRLLLVGHDLRHDMSCLKLEYPSHLLRDTAKYVPLMKT 253
Query: 476 RTHKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVK 515
LK LT +LG IQ G H ED ++A+RL K
Sbjct: 254 NLVSQSLKYLTKSYLGYKIQC--GKHEVYEDCVSAMRLYK 291
>SGD|S000005440 [details] [associations]
symbol:REX4 "Putative RNA exonuclease possibly involved in
ribosome biogenesis" species:4932 "Saccharomyces cerevisiae"
[GO:0005622 "intracellular" evidence=IEA] [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;IGI]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0008408 "3'-5' exonuclease
activity" evidence=ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0090305 "nucleic acid phosphodiester bond hydrolysis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IGI]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 SGD:S000005440
Pfam:PF00929 GO:GO:0005730 EMBL:BK006948 GO:GO:0003676
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 GO:GO:0008408
GO:GO:0006364 KO:K01175 GO:GO:0000027 EMBL:Z74822 OrthoDB:EOG4TB7M4
PIR:S66773 RefSeq:NP_014561.1 ProteinModelPortal:Q08237 SMR:Q08237
DIP:DIP-5458N IntAct:Q08237 MINT:MINT-543211 STRING:Q08237
PaxDb:Q08237 EnsemblFungi:YOL080C GeneID:854075 KEGG:sce:YOL080C
CYGD:YOL080c OMA:ALMLSHP NextBio:975698 Genevestigator:Q08237
GermOnline:YOL080C Uniprot:Q08237
Length = 289
Score = 159 (61.0 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 52/155 (33%), Positives = 75/155 (48%)
Query: 367 LDCEMCKTSNDQNE--LTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVA 424
+DCE + E L R+++V+ +VV + VKP + + T SGI +
Sbjct: 124 MDCEFVGVGPEGKESALARISIVNYFGHVVLDEFVKPREKVVEWRTWVSGIKPEHMKNAI 183
Query: 425 TRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVI--DTS--VIFNTTGIRTHKP 480
T + QK +++L ILVG +L DL AL + HP + DTS + F + P
Sbjct: 184 T-FKEAQKKTADILE-GRILVGHALKHDLEALMLSHPKSLLRDTSRHLPFRKLYAKGKTP 241
Query: 481 KLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVK 515
LK LT L + IQ +G H S EDA A + L K
Sbjct: 242 SLKKLTREVLKISIQ--EGEHSSVEDARATMLLYK 274
Score = 42 (19.8 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 219 SANTESLSATSQNTKSQSQNIES--AFQNTKSQSQYIESAFQNTKSQPQ 265
S+N ++L A+ N S +N +S +N K S+ + + T+ P+
Sbjct: 4 SSNWQALLASESNPTSNGKNKQSNRKIRNVKKVSKTVNVS-STTQYAPR 51
>UNIPROTKB|Q66UW5 [details] [associations]
symbol:Isg20 "Interferon-stimulated gene 20 kDa protein"
species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:0008859 "exoribonuclease II activity" evidence=IEA] [GO:0051607
"defense response to virus" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005634
GO:GO:0046872 GO:GO:0045087 GO:GO:0051607 GO:GO:0003723
GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0006364
GO:GO:0008859 CTD:3669 HOVERGEN:HBG052149 KO:K12579 EMBL:AY702647
RefSeq:NP_001005351.2 UniGene:Ssc.42771 ProteinModelPortal:Q66UW5
SMR:Q66UW5 GeneID:448855 KEGG:ssc:448855 Uniprot:Q66UW5
Length = 181
Score = 145 (56.1 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 52/161 (32%), Positives = 79/161 (49%)
Query: 367 LDCEMCKTS-NDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLA---P 422
+DCEM ++ L R +LV+ V+Y+ ++P IT+Y T SG+T + P
Sbjct: 10 MDCEMVGMGPRRESGLARCSLVNVHGAVLYDKFIQPEGEITDYRTRVSGVTPQHMVGATP 69
Query: 423 VAT-RLEHVQKILSELLPPDAILVGQSLNCDLHALKM-MHPYVI-DTS---VIFNTTGI- 475
A RLE +Q + +L+ VG L D ALK M+ Y I DTS +++ +
Sbjct: 70 FAVARLEILQLLKGKLV------VGHDLKHDFQALKEDMNRYTIYDTSTDMLLWREAKLD 123
Query: 476 RTHKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKL 516
+ L++L L IQN GH S EDA A + L ++
Sbjct: 124 HCRRVSLRVLCERLLHKSIQNSLLGHSSVEDAKATMELYQI 164
>UNIPROTKB|Q2YDK1 [details] [associations]
symbol:ISG20L2 "Interferon-stimulated 20 kDa
exonuclease-like 2" species:9913 "Bos taurus" [GO:0005730
"nucleolus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
GO:GO:0003676 GO:GO:0042254 GO:GO:0004527 GO:GO:0090305
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 EMBL:BC110186
IPI:IPI00711321 RefSeq:NP_001039682.1 UniGene:Bt.80589
ProteinModelPortal:Q2YDK1 SMR:Q2YDK1 PRIDE:Q2YDK1
Ensembl:ENSBTAT00000001989 GeneID:515980 KEGG:bta:515980 CTD:81875
HOVERGEN:HBG107986 InParanoid:Q2YDK1 OMA:GTGPKGH OrthoDB:EOG4H4641
NextBio:20872080 Uniprot:Q2YDK1
Length = 349
Score = 162 (62.1 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 55/181 (30%), Positives = 88/181 (48%)
Query: 346 SKYINTKEVYAEVTPTSP--LYGLDCEMCKTS--NDQNELTRVTLVDEQENVVYESLVKP 401
S + +++ Y+ V+ P + +DCEM T + L R ++V+ +V+Y+ + P
Sbjct: 155 STHTHSENKYSGVSQKIPGKMVAIDCEMVGTGPKGHVSSLARCSIVNYDGDVLYDEYILP 214
Query: 402 YNPITNYLTAYSGITRALLAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHP 461
I +Y T +SGI + + AT + + + ++L I+VG +++ D AL+ +HP
Sbjct: 215 PCHIVDYRTRWSGIRKQHMVN-ATPFKIARNQILKILA-GKIVVGHAIHNDFKALQYIHP 272
Query: 462 YVI--DTSVI--FNTTGIRTHKP--KLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVK 515
+ DTS I N LK LT L DIQ GH S EDA A + L K
Sbjct: 273 KSLTRDTSHIPLLNRKADCPENATMSLKSLTKKLLNRDIQAGKSGHSSVEDAQATMELYK 332
Query: 516 L 516
L
Sbjct: 333 L 333
Score = 42 (19.8 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 30/137 (21%), Positives = 49/137 (35%)
Query: 159 PPSSYTTSLVHELVMSSRHMEAQDMTPSKETSLPSNVTNSTHSPSQTIKSAFPIGTQPVR 218
P + + H + R + + +K+ PS V PSQ ++ GT
Sbjct: 15 PKKALEGNAKHRKFVKKRRLLERKGFLNKKKQPPSKVPKLHSEPSQKGETPRVDGTWKAT 74
Query: 219 SANTESLSATSQNTKSQSQNIESAFQ-NTKSQSQYIESAFQNTKSQPQNIQLASQSTKSK 277
+ +A S + QS + ++A T + SQ S + Q A KS
Sbjct: 75 PLPKKKTTAASSSGSEQSLDKKAAVPWLTPAPSQKAGSVVAKVDLLGE-FQSALPKIKSH 133
Query: 278 SEIPLNDES-KSATPQN 293
P S K+ P+N
Sbjct: 134 PTRPQKKGSQKNPPPKN 150
>RGD|1359413 [details] [associations]
symbol:Isg20l2 "interferon stimulated exonuclease gene 20-like
2" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 RGD:1359413 GO:GO:0005730 GO:GO:0003676
GO:GO:0042254 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
HOGENOM:HOG000182422 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 CTD:81875 HOVERGEN:HBG107986
OrthoDB:EOG4H4641 EMBL:BC079314 IPI:IPI00373225
RefSeq:NP_001007742.1 UniGene:Rn.56954 ProteinModelPortal:Q6AXU3
PRIDE:Q6AXU3 Ensembl:ENSRNOT00000015471 GeneID:361977
KEGG:rno:361977 UCSC:RGD:1359413 InParanoid:Q6AXU3 OMA:ESGARTF
NextBio:678262 Genevestigator:Q6AXU3 Uniprot:Q6AXU3
Length = 369
Score = 160 (61.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 54/165 (32%), Positives = 79/165 (47%)
Query: 364 LYGLDCEMCKTS--NDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLA 421
+ +DCEM T + L R ++V+ +V+Y+ ++P I +Y T +SGI + +
Sbjct: 195 MVAIDCEMVGTGPKGRVSSLARCSIVNYNGDVLYDEYIRPPCYIVDYRTRWSGIRKCHMV 254
Query: 422 ---PVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVI--DTSVIFNTTGIR 476
P T + KILS ++VG +++ D AL+ HP + DTS I +
Sbjct: 255 NATPFKTARSQILKILS-----GKVVVGHAIHNDYKALQYFHPKSLTRDTSQI-PLLNRK 308
Query: 477 THKPK-----LKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKL 516
P+ LK LT L DIQ GH S EDA A L L KL
Sbjct: 309 ADCPENVTLSLKHLTKKLLSRDIQTGLSGHSSVEDAQATLELYKL 353
>WB|WBGene00012465 [details] [associations]
symbol:Y17G7B.12 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 eggNOG:COG0847 HOGENOM:HOG000182422
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00520000055542
EMBL:AL023828 PIR:T26504 RefSeq:NP_496560.1
ProteinModelPortal:Q9XXI3 SMR:Q9XXI3 STRING:Q9XXI3 PaxDb:Q9XXI3
EnsemblMetazoa:Y17G7B.12.1 EnsemblMetazoa:Y17G7B.12.2 GeneID:174842
KEGG:cel:CELE_Y17G7B.12 UCSC:Y17G7B.12 CTD:174842
WormBase:Y17G7B.12 InParanoid:Q9XXI3 OMA:TAKCTIL NextBio:885742
Uniprot:Q9XXI3
Length = 269
Score = 155 (59.6 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 48/153 (31%), Positives = 75/153 (49%)
Query: 367 LDCEMCKTS--NDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVA 424
+DCE + L R+++V+E +VY+ VKP +T++ TA SGI + A
Sbjct: 105 IDCEYVGAGMGGTTDILARISIVNELGKIVYDKFVKPTEKVTDFRTAVSGIRPENMIK-A 163
Query: 425 TRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVI--DTSVIFNTTGIRTHK--P 480
+ Q +S+L+ I++G +++ D LK+ H + DT+ + H P
Sbjct: 164 IPFDRAQTEVSKLID-GRIVIGHAVHNDFRVLKLNHIRKLTRDTAKCTILKNMANHHGTP 222
Query: 481 KLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRL 513
LK L LG++IQ G H S DA ALRL
Sbjct: 223 SLKKLAKEVLGIEIQR--GEHDSITDARVALRL 253
>DICTYBASE|DDB_G0281327 [details] [associations]
symbol:rexo4 "RNA exonuclease 4" species:44689
"Dictyostelium discoideum" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0090305 "nucleic acid phosphodiester bond
hydrolysis" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004518
"nuclease activity" evidence=IEA] InterPro:IPR012337
dictyBase:DDB_G0281327 Pfam:PF00929 GO:GO:0005634
GenomeReviews:CM000152_GR EMBL:AAFI02000040 GO:GO:0003676
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0004518 RefSeq:XP_640882.1 ProteinModelPortal:Q54U94
STRING:Q54U94 EnsemblProtists:DDB0305008 GeneID:8622938
KEGG:ddi:DDB_G0281327 OMA:NDIPESQ Uniprot:Q54U94
Length = 298
Score = 144 (55.7 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 32/109 (29%), Positives = 60/109 (55%)
Query: 352 KEVYAEVTPTSPLYGLDCEMCKTSNDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTA 411
KE+ + +S + +DC++ + ++ L +V + ++ ++YE +VKP + I ++ T
Sbjct: 114 KEI-DNLNESSKFFSIDCKIIEIEGNKGTLGKVCIANQNGQIIYEKIVKPMDKIVDFRTK 172
Query: 412 YSGITRALLAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMH 460
++G+TR + T VQK + ++L ILVG L DL LK+ H
Sbjct: 173 FTGLTRDKVQREGTDFLQVQKEVEKILR-HKILVGHDLVHDLKNLKLAH 220
Score = 51 (23.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 19/82 (23%), Positives = 42/82 (51%)
Query: 221 NTESLSATSQNTKSQSQNIESAFQNTKSQSQYIESA--FQNTK---SQPQNIQLASQSTK 275
N +S+++ TK + +N +A+Q K ++SA + +TK + +I+ +Q +
Sbjct: 37 NKQSINSNWNVTKEKIKNKNNAYQKKKEAKLKLKSATPYTSTKVIEEKKPHIKDFNQLCQ 96
Query: 276 SKSEI-PLNDESKSATPQNTES 296
+ I P++D S T + ++
Sbjct: 97 EHNIISPIDDNLVSPTQKEIDN 118
Score = 50 (22.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 14/55 (25%), Positives = 29/55 (52%)
Query: 223 ESLSATSQNTKSQSQNIESAFQNTKSQSQYIESAFQNTKSQPQNIQLASQSTKSK 277
ES + S+ +++ Q+I S + TK + + +A+Q K ++ A+ T +K
Sbjct: 26 ESFTKVSKTVENK-QSINSNWNVTKEKIKNKNNAYQKKKEAKLKLKSATPYTSTK 79
>DICTYBASE|DDB_G0269694 [details] [associations]
symbol:pan2 "polyA specific ribonuclease subunit"
species:44689 "Dictyostelium discoideum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0031251 "PAN complex" evidence=ISS] [GO:0006397
"mRNA processing" evidence=ISS] [GO:0006301 "postreplication
repair" evidence=ISS] [GO:0004535 "poly(A)-specific ribonuclease
activity" evidence=ISS] InterPro:IPR017986 InterPro:IPR001394
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR015943
PROSITE:PS50235 SMART:SM00479 dictyBase:DDB_G0269694 Pfam:PF00929
EMBL:AAFI02000005 GenomeReviews:CM000150_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0006397 GO:GO:0003676 GO:GO:0006511
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0004221
GO:GO:0006301 GO:GO:0004535 KO:K12571 GO:GO:0031251 OMA:SKFGIED
RefSeq:XP_646196.2 ProteinModelPortal:Q55DD5
EnsemblProtists:DDB0237517 GeneID:8617149 KEGG:ddi:DDB_G0269694
InParanoid:Q55DD5 Uniprot:Q55DD5
Length = 1536
Score = 140 (54.3 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 45/145 (31%), Positives = 69/145 (47%)
Query: 381 LTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAP-VATR----LEHVQKILS 435
L RV+++ E ++ ++ P+T+YLT +SGI L P ++T+ L+ L
Sbjct: 1303 LARVSIIRENGEAFFDDYIQSIEPVTDYLTRFSGINPGDLDPKLSTKNVITLKSCYLKLR 1362
Query: 436 ELLPPDAILVGQSLNCDLHALKMMHP--YVIDTSVIFNTTGIRTHKPKLKMLTSHFLGLD 493
L+ VG L D + + P +IDT +F R K L+ L L +D
Sbjct: 1363 YLVDQGVKFVGHGLKKDFRIINIYVPPNQIIDTVELFQLKNQR--KLSLRFLAYILLKID 1420
Query: 494 IQNQDGGHCSKEDAIAALRLVKLKL 518
IQ++ HCS EDA A+ L K L
Sbjct: 1421 IQSET--HCSVEDAKTAMDLYKAYL 1443
Score = 70 (29.7 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 23/85 (27%), Positives = 39/85 (45%)
Query: 184 TPSKETSLPSNVTNSTHSPSQTIKSAFPIGTQPVRSANTESLSATSQNTKSQS-QNIESA 242
TP+ +T P N + TH QT +S+ PI T P T + S +S ++ S S ++
Sbjct: 954 TPNGKTLSPPNFSTPTH---QTHQSSTPIST-PTHQITTSNSSTSSNSSTSLSPSSLSIL 1009
Query: 243 FQNTKSQSQYIESAFQNTKSQPQNI 267
N + + + NT + + I
Sbjct: 1010 INNNQLTTTTTTTTTTNTATPIEEI 1034
Score = 61 (26.5 bits), Expect = 3.8e-07, Sum P(3) = 3.8e-07
Identities = 25/93 (26%), Positives = 44/93 (47%)
Query: 208 SAFPIGTQPVRSANTESLSATSQNTKSQSQ-NIESAFQNTKSQSQYIESAFQNTKSQP-Q 265
S+ P+ Q +S+ T + S+TS T S N + N + + + NT SQP
Sbjct: 891 SSIPL--QQSQSSTTTTTSSTSTITVPPSTYNNNNNNNNNNNNNNNNNNNNSNTNSQPIN 948
Query: 266 NIQLASQSTKSKS----EIPLNDESKSATPQNT 294
N +++ + K+ S P + +S+TP +T
Sbjct: 949 NTNISTPNGKTLSPPNFSTPTHQTHQSSTPIST 981
Score = 52 (23.4 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 21/100 (21%), Positives = 43/100 (43%)
Query: 193 SNVTNSTHSPSQTIKSAFPIGTQPVRSANTESLSATSQNTKSQSQNIES-AFQNTKSQSQ 251
+N N++++ SQ I + I T ++ + + S + T S I + Q T S S
Sbjct: 934 NNNNNNSNTNSQPINNT-NISTPNGKTLSPPNFSTPTHQTHQSSTPISTPTHQITTSNSS 992
Query: 252 YIESAFQNTKSQPQNIQLASQSTKSKSEIPLNDESKSATP 291
S+ +T P ++ + + + + + +ATP
Sbjct: 993 --TSSNSSTSLSPSSLSILINNNQLTTTTTTTTTTNTATP 1030
Score = 48 (22.0 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 133 FSLNDYLMFAHELPGLRDRFVKMEVIPPSSYTTSLVHEL 171
F + D+ M + + +F +E I P+SYT S + L
Sbjct: 594 FGVEDFDMVEYN----KTKFAGLENILPNSYTNSCIQNL 628
Score = 45 (20.9 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 201 SPSQTIKSAFPIGTQPVRSANTESLSATSQNTKSQSQNIESAFQNTKSQSQYIESAFQNT 260
SP Q+ ++ +G Q + N + + + N + + N + Q+Q +S+ +
Sbjct: 40 SPLQSQTLSYNLGNQSHNNNNNNNNNNNNNNNNNNNNNNNNNNNQQPPQTQQQQSSPSPS 99
Query: 261 KSQPQNIQ 268
S P N Q
Sbjct: 100 PS-PNNNQ 106
Score = 42 (19.8 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 20/104 (19%), Positives = 43/104 (41%)
Query: 195 VTNSTHSPSQTIKSAFPIG-TQPV-RSANTESLSATSQNTKSQSQNIESAFQNTKSQSQY 252
+T ++P ++ P TQ + + L+A + K Q + I + SQ
Sbjct: 1053 ITEYPNNPEKSKHHVDPKDLTQEINKDGQLYELTACVSHIKDQVKRIP---KQGHCVSQI 1109
Query: 253 IESAFQNTKSQPQNIQLASQSTKSKSEIPLNDESKSATPQNTES 296
S F N + + ++++L + S + N+ + + T N +
Sbjct: 1110 KVSDFYNKEFKEESLELLGSNNNSSNSDNENNTNNTTTFNNNNN 1153
Score = 40 (19.1 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 221 NTESLSATSQNTKSQSQNIESAFQNT-KSQSQYIESAFQN 259
NT + + + N + + N + N K + YI+S + N
Sbjct: 1144 NTTTFNNNNNNNNNNNNNNNNNNNNNNKHRPNYIDSTWFN 1183
>CGD|CAL0003518 [details] [associations]
symbol:orf19.5220 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0000027 "ribosomal large subunit
assembly" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 CGD:CAL0003518
Pfam:PF00929 GO:GO:0005634 GO:GO:0003676 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0006364 KO:K01175 EMBL:AACQ01000070 EMBL:AACQ01000071
RefSeq:XP_716289.1 RefSeq:XP_716353.1 ProteinModelPortal:Q5A3Q0
STRING:Q5A3Q0 GeneID:3641941 GeneID:3642012 KEGG:cal:CaO19.12687
KEGG:cal:CaO19.5220 Uniprot:Q5A3Q0
Length = 285
Score = 151 (58.2 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 51/155 (32%), Positives = 76/155 (49%)
Query: 367 LDCEMCKTSNDQNE--LTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLAPVA 424
+DCE D E L R+++++ V+ ++ V+P +T++ T SGI + A
Sbjct: 119 IDCEFVGIGKDGEESALARISIINYYGVVLLDTYVRPQERVTDWRTWVSGIQSYHMQD-A 177
Query: 425 TRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHP--YVIDTSVIFNTTGIRTHK-PK 481
+ Q EL+ + ILVG ++N DL L + HP + DT I K P
Sbjct: 178 IDFKTAQLKTMELIN-NKILVGHAVNNDLDILFLSHPKSMIRDTCKFPKFREIAGGKSPS 236
Query: 482 LKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKL 516
LK L HF+ +DIQ G H S EDA A + L +L
Sbjct: 237 LKKLIKHFIQVDIQI--GQHSSVEDARATMLLFRL 269
>UNIPROTKB|E2QS77 [details] [associations]
symbol:ISG20L2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005634
GO:GO:0003676 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 CTD:81875 OMA:GTGPKGH
EMBL:AAEX03005314 RefSeq:XP_547530.2 Ensembl:ENSCAFT00000026521
GeneID:490409 KEGG:cfa:490409 NextBio:20863435 Uniprot:E2QS77
Length = 348
Score = 152 (58.6 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 53/166 (31%), Positives = 79/166 (47%)
Query: 359 TPTSPLYGLDCEMCKTS--NDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGIT 416
TP + +DCEM T + L R ++V+ +V+Y+ + P I +Y T +SGI
Sbjct: 170 TPKK-MVAIDCEMVGTGPKGHVSSLARCSIVNYHGDVLYDEYILPPCHIVDYRTRWSGIR 228
Query: 417 RALLAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVI--DTSVI--FNT 472
+ + AT + + + ++L I+VG +++ D AL+ HP + DTS I N
Sbjct: 229 KQHMVN-ATPFKVARGQILKILT-GKIVVGHAIHNDFKALQYFHPKSLTRDTSHIPPLNR 286
Query: 473 TGIRTHKP--KLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKL 516
LK LT L DIQ GH S EDA A + L KL
Sbjct: 287 KADCPENATMSLKSLTKKLLNRDIQVGKSGHSSVEDAQATMELYKL 332
>UNIPROTKB|F1RHI9 [details] [associations]
symbol:ISG20L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005634 GO:GO:0003676
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:GTGPKGH EMBL:CU582900
RefSeq:XP_001924782.1 UniGene:Ssc.54513 Ensembl:ENSSSCT00000007088
GeneID:100157573 KEGG:ssc:100157573 Uniprot:F1RHI9
Length = 343
Score = 155 (59.6 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 54/181 (29%), Positives = 86/181 (47%)
Query: 346 SKYINTKEVYAEVTPTSP--LYGLDCEMCKTS--NDQNELTRVTLVDEQENVVYESLVKP 401
S ++++ Y+ + P + +DCEM T + L R ++V+ +V+Y+ + P
Sbjct: 149 STQAHSEKKYSGASQKGPSKMVAIDCEMVGTGPKGHVSSLARCSIVNYNGDVLYDEYILP 208
Query: 402 YNPITNYLTAYSGITRALLAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHP 461
I +Y T +SGI + + AT + + + ++L I+VG +++ D AL+ HP
Sbjct: 209 PCHIVDYRTRWSGIRKQHMVN-ATPFKIARSQILKILT-GKIVVGHAIHNDFKALQYFHP 266
Query: 462 YVI--DTSVI--FNTTGIRTHKP--KLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVK 515
+ DTS I N LK LT L DIQ GH S EDA A + L K
Sbjct: 267 KSLTRDTSHIPLLNRKADCPENATMSLKRLTKKLLDRDIQVGKSGHSSVEDAQATMELYK 326
Query: 516 L 516
L
Sbjct: 327 L 327
Score = 37 (18.1 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 257 FQNTKSQPQN--IQLASQSTKSKSEIPLND 284
F N K QP + +L S+S+K K + P D
Sbjct: 40 FLNKKQQPPSKVAKLQSESSK-KGKSPKVD 68
>UNIPROTKB|Q9H9L3 [details] [associations]
symbol:ISG20L2 "Interferon-stimulated 20 kDa
exonuclease-like 2" species:9606 "Homo sapiens" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0005634 GO:GO:0005730 GO:GO:0003676
GO:GO:0042254 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
HOGENOM:HOG000182422 InterPro:IPR013520 SUPFAM:SSF53098
EMBL:CH471121 KO:K01175 EMBL:AL590666 CTD:81875 HOVERGEN:HBG107986
OMA:GTGPKGH OrthoDB:EOG4H4641 EMBL:AY391837 EMBL:AK022733
EMBL:BC000575 IPI:IPI00008963 RefSeq:NP_112242.1 UniGene:Hs.301904
ProteinModelPortal:Q9H9L3 IntAct:Q9H9L3 MINT:MINT-1457372
STRING:Q9H9L3 PhosphoSite:Q9H9L3 DMDM:42559527 SWISS-2DPAGE:Q9H9L3
PaxDb:Q9H9L3 PeptideAtlas:Q9H9L3 PRIDE:Q9H9L3 DNASU:81875
Ensembl:ENST00000313146 Ensembl:ENST00000368219 GeneID:81875
KEGG:hsa:81875 UCSC:uc001fps.1 GeneCards:GC01M156691
HGNC:HGNC:25745 HPA:HPA028005 MIM:611930 neXtProt:NX_Q9H9L3
PharmGKB:PA142671650 InParanoid:Q9H9L3 PhylomeDB:Q9H9L3
ChiTaRS:ISG20L2 GenomeRNAi:81875 NextBio:72218 Bgee:Q9H9L3
CleanEx:HS_ISG20L2 Genevestigator:Q9H9L3 GermOnline:ENSG00000143319
Uniprot:Q9H9L3
Length = 353
Score = 149 (57.5 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 51/161 (31%), Positives = 77/161 (47%)
Query: 364 LYGLDCEMCKTS--NDQNELTRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRALLA 421
+ +DCEM T + L R ++V+ +V+Y+ + P I +Y T +SGI + +
Sbjct: 179 MVAIDCEMVGTGPKGHVSSLARCSIVNYNGDVLYDEYILPPCHIVDYRTRWSGIRKQHMV 238
Query: 422 PVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVI--DTSVI--FNTTGIRT 477
AT + + + ++L I+VG +++ D AL+ HP + DTS I N
Sbjct: 239 N-ATPFKIARGQILKILT-GKIVVGHAIHNDFKALQYFHPKSLTRDTSHIPPLNRKADCP 296
Query: 478 HKP--KLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLVKL 516
LK LT L DIQ GH S EDA A + L KL
Sbjct: 297 ENATMSLKHLTKKLLNRDIQVGKSGHSSVEDAQATMELYKL 337
Score = 39 (18.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 14/59 (23%), Positives = 27/59 (45%)
Query: 182 DMTPSKETSLPSNVTNSTHSPSQTIKSAFPIGTQPVRSANTESLSATSQNTKS-QSQNI 239
D+ +++LP ++ T S ++ + P ++A S A S+N S SQ +
Sbjct: 117 DLLGEFQSALPKINSHPTRSQKKSSQKKSSKKNHPQKNAPQNSTQAHSENKCSGASQKL 175
>ASPGD|ASPL0000071877 [details] [associations]
symbol:AN5013 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0000175 "3'-5'-exoribonuclease activity" evidence=IEA]
[GO:0034476 "U5 snRNA 3'-end processing" evidence=IEA] [GO:0000467
"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:BN001303 EMBL:AACD01000084 GO:GO:0006364
RefSeq:XP_662617.1 ProteinModelPortal:Q5B367 GeneID:2872816
KEGG:ani:AN5013.2 HOGENOM:HOG000198400 OMA:FDCEMGY
OrthoDB:EOG4JMBZF Uniprot:Q5B367
Length = 638
Score = 127 (49.8 bits), Expect = 5.5e-07, Sum P(3) = 5.5e-07
Identities = 38/122 (31%), Positives = 66/122 (54%)
Query: 401 PYNPITNYLTAYSGITRALLAPVATRLEHVQKILSELLPPDAILVGQSLNCDLHALKMMH 460
PY+ +A S + + L V++ + +L LL P L+G +++ DL+A +++H
Sbjct: 468 PYSTAPTKSSAPSSSSPSQLQLVSSPAA-ARTLLFNLLTPSTPLIGHAIDNDLNACRIIH 526
Query: 461 PYVIDTSVIF-NTTGIRTHKPKLKMLTSHFLGLDIQN--QDG--GHCSKEDAIAALRLVK 515
P VIDT++++ + G ++ L+ L L +IQ G GH S EDA+A LV+
Sbjct: 527 PTVIDTAILYPHPGGGLPYRMSLRTLAKKHLDREIQTGGASGKQGHDSVEDALATGDLVR 586
Query: 516 LK 517
+K
Sbjct: 587 VK 588
Score = 60 (26.2 bits), Expect = 5.5e-07, Sum P(3) = 5.5e-07
Identities = 22/66 (33%), Positives = 33/66 (50%)
Query: 357 EVTPTSP-LYG-----LDCEMCKTSNDQNELTRVTLVDEQENV-VYESLVKPYNPITNYL 409
E TP +P L+ DCEM T+ EL R+T V E V + LV+P + +
Sbjct: 394 EKTPENPDLHNPTPICFDCEMGYTTLGM-ELIRLTAVSWPEGKKVLDVLVRPLGEVLDLN 452
Query: 410 TAYSGI 415
+ +SG+
Sbjct: 453 SRFSGV 458
Score = 48 (22.0 bits), Expect = 5.5e-07, Sum P(3) = 5.5e-07
Identities = 33/162 (20%), Positives = 66/162 (40%)
Query: 125 AHHTVNLGFSLNDYLMFAHELPGLRDRFVKMEVIPPSSYTTSLVHELVMSSRHM-EAQDM 183
+H +N + D ++ E L + +K+E P + T +L RH+ ++
Sbjct: 27 SHRDLNSAPAAQDQVLEQKEPAKLPPKRLKLEPRPEAKETPK--DDL----RHVSDSGRS 80
Query: 184 TPSKETSLPSNVTNSTHSPSQTIKSAFPIGTQPVRSANTESLSATSQNTKSQSQNIESAF 243
TP K+T+ P+ TN+ ++ P+ QP NT AT+ + + N S+
Sbjct: 81 TPVKKTTAPA--TNA--------ENISPVSRQPNIPKNT----ATAPIKRELNANTGSSI 126
Query: 244 QNTKSQSQYIESAFQNTKSQPQNIQLASQSTKSKSEIPLNDE 285
++ + + N+++A + LND+
Sbjct: 127 PPRRAPKEALNPRMIQKSPATYNVRMAILKKLHGTLCSLNDQ 168
>ASPGD|ASPL0000070457 [details] [associations]
symbol:AN4357 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
InterPro:IPR006055 InterPro:IPR007087 InterPro:IPR012337
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00479 Pfam:PF00929 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:BN001303 InterPro:IPR022755 Pfam:PF12171
EMBL:AACD01000075 RefSeq:XP_661961.1 ProteinModelPortal:Q5B523
EnsemblFungi:CADANIAT00006101 GeneID:2872156 KEGG:ani:AN4357.2
OrthoDB:EOG4B5SDQ Uniprot:Q5B523
Length = 560
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 47/163 (28%), Positives = 81/163 (49%)
Query: 367 LDCEMC----KTSNDQNELTRVTLVDEQEN-VVYESLVKPY--NPITNYLTAYSGITRAL 419
LDCEM +++ +E+ R+ VD V+ + V+P + N+ T SG+ ++L
Sbjct: 371 LDCEMVGVVGPNNSEVSEVVRLAAVDFLSGEVLVNTFVEPAADQRVINWRTRVSGVNKSL 430
Query: 420 LAPVATRLEHVQ--KILSELL----PPDAILVGQSLNCDLHALKMMHPYVIDTSVIFN-- 471
L+ + + + VQ + +LL IL+G SL+ DL L M+H ++D++++
Sbjct: 431 LSEMKKQGQTVQGWEAARDLLWMFVDKQTILIGHSLHNDLAVLGMVHQRIVDSAILTRDA 490
Query: 472 TTGIRTHKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRLV 514
G + +++ L F LDIQ G C ED AA +V
Sbjct: 491 VAGAKEDCARVRKLAKTFFELDIQTGKGHDCL-EDTFAAREVV 532
>TAIR|locus:2170533 [details] [associations]
symbol:AT5G40310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00096 InterPro:IPR006055 InterPro:IPR007087
InterPro:IPR012337 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 SMART:SM00479 Pfam:PF00929
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:AB006702 HOGENOM:HOG000237419
ProtClustDB:CLSN2687545 IPI:IPI00536517 RefSeq:NP_198847.1
UniGene:At.55275 ProteinModelPortal:Q9FNE7 SMR:Q9FNE7
EnsemblPlants:AT5G40310.1 GeneID:834029 KEGG:ath:AT5G40310
TAIR:At5g40310 InParanoid:Q9FNE7 OMA:ITDESEN PhylomeDB:Q9FNE7
Genevestigator:Q9FNE7 Uniprot:Q9FNE7
Length = 348
Score = 140 (54.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 57/178 (32%), Positives = 84/178 (47%)
Query: 362 SP-LYGLDCEMCKTSNDQN-EL-TRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRA 418
SP + L C+M +D + +L RV + DE ENVV+ + VKP P+TNY +GI
Sbjct: 123 SPRVVALSCKMVGGGSDGSLDLCARVCITDESENVVFHTYVKPTIPVTNYRYEMTGIRPE 182
Query: 419 LLAPVATRLEHVQKILSELL----------PPDA---ILVGQSLNCDLHALKMMHP--YV 463
L A RL+H Q+ + E L P + ILVG L+ L +L++ + +
Sbjct: 183 NLRD-AMRLKHAQRKVQEFLCNGEPMWKIRPRNGKARILVGHGLDNHLDSLQLEYSSSMI 241
Query: 464 IDTSVIFNTTGIRTHKPKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRL-VKLKLSK 520
DT+ LK LT +LG DI G ED +A +RL +++ K
Sbjct: 242 RDTAEYPPLMKSSKLSNSLKYLTQAYLGYDIHV--GIQDPYEDCVATMRLYTRMRYQK 297
>UNIPROTKB|G4N4M9 [details] [associations]
symbol:MGG_06005 "RNA exonuclease 3" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:CM001233 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
RefSeq:XP_003711851.1 ProteinModelPortal:G4N4M9
EnsemblFungi:MGG_06005T0 GeneID:2683970 KEGG:mgr:MGG_06005
Uniprot:G4N4M9
Length = 701
Score = 111 (44.1 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 33/99 (33%), Positives = 51/99 (51%)
Query: 428 EHVQKILSELLPPDAILVGQSLNCDLHALKMMHPYVIDTSVIF-NTTGIRTHKPKLKMLT 486
E + +L L+ D L+G L DL+ ++++HP ++DT +++ + G+ L+ML
Sbjct: 573 EVARDLLFSLISRDTPLMGHGLENDLNCMRVVHPVIVDTVLLYPHNRGLPIRNG-LRMLM 631
Query: 487 SHFLGLDIQ-----NQDGGHCSKEDAIAALRLVKLKLSK 520
L IQ Q GH S EDA AA LV+ K K
Sbjct: 632 QTILNTRIQVEPAEGQLAGHDSAEDARAAGDLVRWKTRK 670
Score = 62 (26.9 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 221 NTESLSATSQNTKSQSQNIESAFQNTKSQSQYIESAFQNTKSQPQNIQLASQST 274
NT+S++ T+Q S + S++ KSQ Q + F K P + A + T
Sbjct: 139 NTQSVTPTTQR-HSHNNPFSSSYSTPKSQQQANNNPFSTRKHSPVSTTPAPEPT 191
Score = 48 (22.0 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 368 DCEMCKTSNDQNELTRVTLVD-EQENVVYESLVKPYNPITNYLTAYSGI 415
DCEM T E+ R T + + LV+P+ + + + YSG+
Sbjct: 489 DCEMGYTVKGF-EMIRFTATSWPSGEELMDVLVRPFGEVLDLNSQYSGV 536
>TAIR|locus:2086839 [details] [associations]
symbol:AT3G27970 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR006055 InterPro:IPR007087 InterPro:IPR012337
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00479 Pfam:PF00929 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:BT033110
EMBL:AB493636 IPI:IPI00533339 RefSeq:NP_189436.2 UniGene:At.50233
ProteinModelPortal:B3LFC1 SMR:B3LFC1 PaxDb:B3LFC1 PRIDE:B3LFC1
EnsemblPlants:AT3G27970.1 GeneID:822421 KEGG:ath:AT3G27970
TAIR:At3g27970 HOGENOM:HOG000237419 OMA:LPKVECA PhylomeDB:B3LFC1
ProtClustDB:CLSN2687545 Genevestigator:B3LFC1 Uniprot:B3LFC1
Length = 357
Score = 126 (49.4 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 54/178 (30%), Positives = 84/178 (47%)
Query: 362 SP-LYGLDCEMCKTSNDQN-EL-TRVTLVDEQENVVYESLVKPYNPITNYLTAYSGITRA 418
SP + L C+M +D + +L RV + DE +NV++ + VKP +T+Y +GI
Sbjct: 132 SPRVVALSCKMVGGGSDGSLDLCARVCITDESDNVIFHTYVKPSMAVTSYRYETTGIRPE 191
Query: 419 LLAPVATRLEHVQKILSELL----P-----PDA----ILVGQSLNCDLHALKMMHPYVID 465
L A L+ VQ+ + E L P P ILVG L+ DL L++ +P +
Sbjct: 192 NLRD-AMPLKQVQRKIQEFLCNGEPMWKIRPRGGKARILVGHGLDHDLDRLQLEYPSSMI 250
Query: 466 TSVIFNTTGIRTHK--PKLKMLTSHFLGLDIQNQDGGHCSKEDAIAALRL-VKLKLSK 520
++T K LK LT +LG D+ G ED +A +RL +++ K
Sbjct: 251 RDTAKYPPLMKTSKLSNSLKYLTQAYLGYDVHF--GIQDPYEDCVATMRLYTRMRYQK 306
>UNIPROTKB|Q5F450 [details] [associations]
symbol:PAN2 "PAB-dependent poly(A)-specific ribonuclease
subunit 2" species:9031 "Gallus gallus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay" evidence=IEA]
[GO:0004535 "poly(A)-specific ribonuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001394
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR015943
PROSITE:PS50235 SMART:SM00479 Pfam:PF00929 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0003676 GO:GO:0090305 GO:GO:0006511 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0004221 GO:GO:0004535
KO:K12571 EMBL:AJ851450 IPI:IPI00579039 RefSeq:NP_001012972.1
UniGene:Gga.18769 ProteinModelPortal:Q5F450 STRING:Q5F450
GeneID:429172 KEGG:gga:429172 CTD:9924 HOGENOM:HOG000230585
HOVERGEN:HBG089847 InParanoid:Q5F450 OrthoDB:EOG4HQDHH
NextBio:20829982 Uniprot:Q5F450
Length = 1197
Score = 123 (48.4 bits), Expect = 0.00070, P = 0.00070
Identities = 60/200 (30%), Positives = 90/200 (45%)
Query: 335 IPLRGELSAKFSKYINTKEVYAEVTPTSPLYGLDCEMCKTSNDQNELTRVTLVDEQ---E 391
+P G+L ++++ E AE+ G + K S Q + R+T V Q E
Sbjct: 963 MPQAGDLVGLDAEFVTLNEEEAELRSD----GTKSTI-KPS--QMSVARITCVRGQGPNE 1015
Query: 392 NVVY-ESLVKPYNPITNYLTAYSGITRALL-APVA----TRLEHVQKILSELLPPDAILV 445
V + + + + +YLT YSGI L A ++ T L+ L L+ V
Sbjct: 1016 GVPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDVGVKFV 1075
Query: 446 GQSLNCDLHALKMMHP--YVIDTSVIFNTTGIRTHKPKLKMLTSHFLGLDIQNQDGGHCS 503
G L D + +M P VIDT +F+ R L+ L +FL L IQ + H S
Sbjct: 1076 GHGLQKDFRVINLMVPKDQVIDTVYLFHIP--RKRMISLRFLAWYFLDLKIQGET--HDS 1131
Query: 504 KEDAIAALRLVK--LKLSKG 521
EDA AL+L + L+LS+G
Sbjct: 1132 IEDARTALQLYRKYLELSQG 1151
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.128 0.354 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 528 498 0.00084 119 3 11 23 0.44 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 99
No. of states in DFA: 594 (63 KB)
Total size of DFA: 242 KB (2129 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 54.04u 0.16s 54.20t Elapsed: 00:00:05
Total cpu time: 54.05u 0.16s 54.21t Elapsed: 00:00:05
Start: Thu Aug 15 15:57:14 2013 End: Thu Aug 15 15:57:19 2013