BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy17351
         (162 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q17R09|PRP16_BOVIN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos
            taurus GN=DHX38 PE=2 SV=1
          Length = 1227

 Score =  200 bits (508), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 105/192 (54%), Positives = 132/192 (68%), Gaps = 32/192 (16%)

Query: 1    MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSA--------------------- 39
            MRKVREVR QLK+I++QQ+M L SCGTDWD++RKCIC+A                     
Sbjct: 1038 MRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGM 1097

Query: 40   ---------LFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKS 90
                     LFGMG+TPDY+VYHEL+MT+KEYMQCVTAVDG+WLAELGPMF+SVK+ GKS
Sbjct: 1098 PCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKS 1157

Query: 91   GSTKRRKALEHLHEMEDQMKQAQDEIQARKEEEERRQAQVSSRVGEILTPGLKETAPGTP 150
                RR+A E    ME++M  A+++++AR++E+E+R    S R  +I TPG KE   G P
Sbjct: 1158 RQENRRRAKEEASAMEEEMALAEEQLRARRQEQEKRSPLGSVRSTKIYTPGRKEQ--GEP 1215

Query: 151  YTPRRTPKRFGL 162
             TPRRTP RFGL
Sbjct: 1216 MTPRRTPARFGL 1227


>sp|Q92620|PRP16_HUMAN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo
            sapiens GN=DHX38 PE=1 SV=2
          Length = 1227

 Score =  200 bits (508), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 105/192 (54%), Positives = 132/192 (68%), Gaps = 32/192 (16%)

Query: 1    MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSA--------------------- 39
            MRKVREVR QLK+I++QQ+M L SCGTDWD++RKCIC+A                     
Sbjct: 1038 MRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGM 1097

Query: 40   ---------LFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKS 90
                     LFGMG+TPDY+VYHEL+MT+KEYMQCVTAVDG+WLAELGPMF+SVK+ GKS
Sbjct: 1098 PCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKS 1157

Query: 91   GSTKRRKALEHLHEMEDQMKQAQDEIQARKEEEERRQAQVSSRVGEILTPGLKETAPGTP 150
                RR+A E    ME++M  A+++++AR++E+E+R    S R  +I TPG KE   G P
Sbjct: 1158 RQENRRRAKEEASAMEEEMALAEEQLRARRQEQEKRSPLGSVRSTKIYTPGRKEQ--GEP 1215

Query: 151  YTPRRTPKRFGL 162
             TPRRTP RFGL
Sbjct: 1216 MTPRRTPARFGL 1227


>sp|P34498|MOG1_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1
            OS=Caenorhabditis elegans GN=mog-1 PE=1 SV=2
          Length = 1131

 Score =  156 bits (394), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 80/169 (47%), Positives = 110/169 (65%), Gaps = 32/169 (18%)

Query: 1    MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSA--------------------- 39
            ++KVREVR QLKEI+   K+ L+S G++WD++RKCICSA                     
Sbjct: 948  LKKVREVRAQLKEIMQDLKLPLISNGSEWDIVRKCICSAYFHNAARLKGIGEYVNVRTGI 1007

Query: 40   ---------LFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKS 90
                     LFGMGF PDYVVYHELIMT+KEYMQCVTAVD  WLAELGPMF+S+KE+ +S
Sbjct: 1008 PCFLHPTSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSIKESKQS 1067

Query: 91   GSTKRRKALEHLHEMEDQMKQAQDEIQARKEEEER--RQAQVSSRVGEI 137
                + +++  +  ME +M++AQ E++ RKEE ++  ++ + S RV E+
Sbjct: 1068 RKELKMESVRTVETMEAEMREAQKEMERRKEESDKAFKRPESSRRVVEV 1116


>sp|Q9P774|PRP16_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16
            OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
            GN=prp16 PE=3 SV=2
          Length = 1173

 Score = 97.4 bits (241), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 53/163 (32%), Positives = 91/163 (55%), Gaps = 32/163 (19%)

Query: 1    MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSA--------------------- 39
            +++ R++R QL EI+ +QK+ L S  +DWD++R+ +CSA                     
Sbjct: 998  LKRARDIRQQLVEIMSKQKISLESV-SDWDIVRRVLCSAYFHQAACAKGIGEYVHLRSGM 1056

Query: 40   ---------LFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKS 90
                     L+G+G+ PDYV+YHEL++TSKEYM  VT+VD  WLAE G +++SVKE  ++
Sbjct: 1057 PCHLHVTSSLYGLGYLPDYVIYHELVLTSKEYMNIVTSVDPYWLAEFGGVYYSVKERFRN 1116

Query: 91   GSTKRRKALEHLHEMEDQMKQAQDEIQARKEEEERRQAQVSSR 133
             +    +      +++ Q+  A  E+ A+++  + ++   S R
Sbjct: 1117 ETESYDRVFSSKPQLDAQIA-ADRELDAKQKLAKNQEPVKSKR 1158


>sp|P15938|PRP16_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
           OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
           GN=PRP16 PE=1 SV=2
          Length = 1071

 Score = 90.5 bits (223), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 47/113 (41%), Positives = 62/113 (54%), Gaps = 30/113 (26%)

Query: 3   KVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICS------------------------ 38
           + R++R QL  IL  QK+ ++S G DWD+I+KCICS                        
Sbjct: 874 RARDIRDQLLTILKSQKIPVISSGKDWDIIKKCICSGFAHQAAKITGLRNYVHLKTGVSV 933

Query: 39  ------ALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVK 85
                 AL G+G  P YVVYHEL+MTSKEY+ CVT+VD  WL E G + + +K
Sbjct: 934 QLHPTSALHGLGDLPPYVVYHELLMTSKEYICCVTSVDPFWLMEYGGLLYDIK 986


>sp|Q54F05|DHX8_DICDI ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8
            PE=3 SV=1
          Length = 1160

 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 28/132 (21%)

Query: 1    MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALFG------------------ 42
            +R+ ++VR QL  I+ + K+ ++S G ++  I+K ICS  F                   
Sbjct: 1015 LRRAQDVRKQLITIMDRYKLDIISAGRNYTKIQKAICSGFFANASKKDPNEGYKTLVEGQ 1074

Query: 43   ----------MGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGS 92
                          PD+V+YHEL+MT+KEYM+ V  +D +WL EL P FF   +  K   
Sbjct: 1075 PVYIHPSSTLFNRNPDWVIYHELVMTTKEYMREVCTIDPKWLVELAPKFFKTSDPNKISK 1134

Query: 93   TKRRKALEHLHE 104
             KR++ +E L++
Sbjct: 1135 RKRKEKIEPLYD 1146


>sp|Q09530|MOG5_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5
            OS=Caenorhabditis elegans GN=mog-5 PE=1 SV=1
          Length = 1200

 Score = 85.1 bits (209), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 28/132 (21%)

Query: 1    MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALFGM--------GF------- 45
            M++ +++R QL  I+ + K+ +VSCG D   ++K ICS  F          G+       
Sbjct: 1047 MKRAQDIRKQLLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYRTLTDGQ 1106

Query: 46   -------------TPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGS 92
                          P++VVYHEL+MT+KEYM+ VTA+D +WL E  P FF + ++ K  +
Sbjct: 1107 NVYIHPSSACFQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGDSTKLST 1166

Query: 93   TKRRKALEHLHE 104
             KR + ++ L +
Sbjct: 1167 FKRNQKIDPLFD 1178


>sp|Q38953|DHX8_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
            OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2
          Length = 1168

 Score = 82.8 bits (203), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 28/132 (21%)

Query: 1    MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALFGMGF--------------- 45
            +R+ ++VR QL  I+ + K+ +V+ G ++  IRK I +  F  G                
Sbjct: 1022 LRRAQDVRKQLLSIMDKYKLDVVTAGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQ 1081

Query: 46   -------------TPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGS 92
                          PD+V+YH+L+MT+KEYM+ VT +D +WL EL P FF V +  K   
Sbjct: 1082 PVYIHPSSALFQRQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSK 1141

Query: 93   TKRRKALEHLHE 104
             KR++ +E L++
Sbjct: 1142 RKRQERIEPLYD 1153


>sp|Q14562|DHX8_HUMAN ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1
          Length = 1220

 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 28/132 (21%)

Query: 1    MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALFG------------------ 42
            +R+ +++R Q+  I+ + K+ +VSCG     ++K ICS  F                   
Sbjct: 1072 LRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQ 1131

Query: 43   ----------MGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGS 92
                          P++VVYHEL++T+KEYM+ VT +D +WL E  P FF V +  K   
Sbjct: 1132 VVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSK 1191

Query: 93   TKRRKALEHLHE 104
             K+++ LE L+ 
Sbjct: 1192 QKKQQRLEPLYN 1203


>sp|A2A4P0|DHX8_MOUSE ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1
          Length = 1244

 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 28/132 (21%)

Query: 1    MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALFG------------------ 42
            +R+ +++R Q+  I+ + K+ +VSCG     ++K ICS  F                   
Sbjct: 1096 LRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQ 1155

Query: 43   ----------MGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGS 92
                          P++VVYHEL++T+KEYM+ VT +D +WL E  P FF V +  K   
Sbjct: 1156 VVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSK 1215

Query: 93   TKRRKALEHLHE 104
             K+++ LE L+ 
Sbjct: 1216 QKKQQRLEPLYN 1227


>sp|O42643|PRP22_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
            OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
            GN=prp22 PE=1 SV=1
          Length = 1168

 Score = 69.7 bits (169), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 29/125 (23%)

Query: 1    MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALFG------------------ 42
            MR+  +VR QL  ++ + +  +VSCG   ++I + +CS  F                   
Sbjct: 1018 MRRAEDVRKQLIRLMDRYRHPVVSCGRKRELILRALCSGYFTNVAKRDSHEGCYKTIVEN 1077

Query: 43   -----------MGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSG 91
                        G   ++V+YHELI TSKEYM  V+ V+ +WL E+ P FF      +  
Sbjct: 1078 APVYMHPSGVLFGKAAEWVIYHELIQTSKEYMHTVSTVNPKWLVEVAPTFFKFANANQVS 1137

Query: 92   STKRR 96
             TK+ 
Sbjct: 1138 KTKKN 1142


>sp|P24384|PRP22_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
            OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
            GN=PRP22 PE=1 SV=1
          Length = 1145

 Score = 68.2 bits (165), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 31/126 (24%)

Query: 1    MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF------------------- 41
            +++ R+V++Q+  I  +  +KL+SC +D D+IRK   S  F                   
Sbjct: 990  LKRARDVKSQISMIFKKIGLKLISCHSDPDLIRKTFVSGFFMNAAKRDSQVGYKTINGGT 1049

Query: 42   GMGFTP---------DYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGS 92
             +G  P         +YV+YH +++TS+EYM  VT+++ QWL E+ P F+   + G + S
Sbjct: 1050 EVGIHPSSSLYGKEYEYVMYHSIVLTSREYMSQVTSIEPQWLLEVAPHFY---KAGDAES 1106

Query: 93   TKRRKA 98
              R+KA
Sbjct: 1107 QSRKKA 1112


>sp|Q54MH3|DHX16_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
            OS=Dictyostelium discoideum GN=dhx16 PE=3 SV=1
          Length = 1106

 Score = 63.9 bits (154), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 28/118 (23%)

Query: 1    MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF---------GMGFT----- 46
            M++ ++VR QL+ +L + ++ LVS   D D IRKCI S  F         G+  T     
Sbjct: 975  MKRAQDVRDQLELLLERVEIPLVSNVDDTDSIRKCIASGFFYNSAKLEKSGLFRTTKHNQ 1034

Query: 47   --------------PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKS 90
                          P +VVYHEL++T+KE+M+ +  +   WL E+ P  +  K+   +
Sbjct: 1035 SVQIHPSSCLFQSPPKWVVYHELVLTTKEFMRQIVEIQSSWLHEIAPHIYKEKDVNDN 1092


>sp|Q767K6|DHX16_PIG Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
            OS=Sus scrofa GN=DHX16 PE=3 SV=1
          Length = 1045

 Score = 60.5 bits (145), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 27/113 (23%)

Query: 1    MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALFGM-------GF-------- 45
            MR+ R+VR QL+ +L + ++ L SC  D+  +RK I +  F         G+        
Sbjct: 912  MRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSGYRTVKQQQT 971

Query: 46   ------------TPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKE 86
                         P +++YHEL++T+KE+M+ V  ++  WL E+ P ++  KE
Sbjct: 972  VFIHPNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKE 1024


>sp|Q7YR39|DHX16_PANTR Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
            OS=Pan troglodytes GN=DHX16 PE=3 SV=1
          Length = 1044

 Score = 60.5 bits (145), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 27/113 (23%)

Query: 1    MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALFGM-------GF-------- 45
            MR+ R+VR QL+ +L + ++ L SC  D+  +RK I +  F         G+        
Sbjct: 911  MRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSGYRTVKQQQT 970

Query: 46   ------------TPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKE 86
                         P +++YHEL++T+KE+M+ V  ++  WL E+ P ++  KE
Sbjct: 971  VFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKE 1023


>sp|O60231|DHX16_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
            OS=Homo sapiens GN=DHX16 PE=1 SV=2
          Length = 1041

 Score = 60.5 bits (145), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 27/113 (23%)

Query: 1    MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALFGM-------GF-------- 45
            MR+ R+VR QL+ +L + ++ L SC  D+  +RK I +  F         G+        
Sbjct: 908  MRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSGYRTVKQQQT 967

Query: 46   ------------TPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKE 86
                         P +++YHEL++T+KE+M+ V  ++  WL E+ P ++  KE
Sbjct: 968  VFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKE 1020


>sp|Q9H5Z1|DHX35_HUMAN Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35
           PE=1 SV=2
          Length = 703

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 32/121 (26%)

Query: 7   VRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALFGMGF--------------------- 45
           VR QLK++L++ ++   S   D D++ +CI S  F                         
Sbjct: 581 VREQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHP 640

Query: 46  --------TPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
                    P +V+Y+E+I TSK YM+ VTA++  WL EL P F+   + G   S K ++
Sbjct: 641 ASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY---QQGTHLSLKAKR 697

Query: 98  A 98
           A
Sbjct: 698 A 698


>sp|Q54NJ4|DHX15_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15
           OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1
          Length = 727

 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 31/120 (25%)

Query: 1   MRKVREVRTQLKEILIQQKMKLVSCGTD----WDVIRKCICSALF--------------- 41
           +++   VR+QL  IL + K+ LVS   +    ++ I+KCI +  F               
Sbjct: 581 IKQADSVRSQLARILTRFKLPLVSGDVNSKFYYENIKKCIAAGFFMQVAKCEKKNIYFTL 640

Query: 42  ------------GMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGK 89
                       G+   P++ +Y+E ++TS+ Y++ +T V   WL EL P +F  K   K
Sbjct: 641 GDEQSVIFHPSTGLTRRPEFCIYNEFVLTSENYIRTITDVKFDWLLELAPSYFKQKSFPK 700


>sp|Q9H6R0|DHX33_HUMAN Putative ATP-dependent RNA helicase DHX33 OS=Homo sapiens GN=DHX33
           PE=1 SV=2
          Length = 707

 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 28/110 (25%)

Query: 1   MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF---------GMGFT----- 46
           M  V EVR QL++I ++  M + S   D + +R+C+  +LF         G   T     
Sbjct: 589 MTLVAEVRAQLRDICLKMSMPIASSRGDVESVRRCLAHSLFMSTAELQPDGTYATTDTHQ 648

Query: 47  --------------PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFF 82
                         P  VVY EL+ T+K YM+ +  +D QWL E  P +F
Sbjct: 649 PVAIHPSSVLFHCKPACVVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYF 698


>sp|O42945|DHX15_SCHPO Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43
           OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
           GN=prp43 PE=3 SV=1
          Length = 735

 Score = 52.8 bits (125), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 34/137 (24%)

Query: 7   VRTQLKEILIQQKMKLVSCGTD----WDVIRKCICSALF--------------------- 41
           VR QL+  + +Q+++L+S   D    +  IR+ + S  F                     
Sbjct: 597 VRKQLRRTMERQEVELISTPFDDKNYYVNIRRALVSGFFMQVAKKSANGKNYVTMKDNQV 656

Query: 42  -------GMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTK 94
                  G+  TP++VVY+E ++T+K +++ VTA+  +WL EL P ++ + +   +   K
Sbjct: 657 VSLHPSCGLSVTPEWVVYNEFVLTTKSFIRNVTAIRPEWLIELAPNYYDLDDFDNNKEVK 716

Query: 95  RRKALEHLHEMEDQMKQ 111
              AL+ +++M  + K+
Sbjct: 717 --SALQKVYQMAARSKK 731


>sp|Q5RBD4|DHX35_PONAB Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35
           PE=2 SV=1
          Length = 720

 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 29/105 (27%)

Query: 7   VRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALFGMGF--------------------- 45
           VR QLK++L++ ++   S   D D + +CI S  F                         
Sbjct: 581 VREQLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHP 640

Query: 46  --------TPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFF 82
                    P +V+Y+E+I TSK YM+ VTA++  WL EL P F+
Sbjct: 641 ASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY 685


>sp|Q80VY9|DHX33_MOUSE Putative ATP-dependent RNA helicase DHX33 OS=Mus musculus GN=Dhx33
           PE=1 SV=1
          Length = 698

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 28/110 (25%)

Query: 1   MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF---------GMGFT----- 46
           M  V EVR QL+EI ++  M ++S   D + +R+C+  +LF         G   T     
Sbjct: 580 MLLVAEVRAQLREICLKMSMPIMSSRGDMESVRRCMAHSLFMNTAELQTDGTYATTDTHQ 639

Query: 47  --------------PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFF 82
                         P  VVY  L+ T+K YM+ +  VD +WL E  P +F
Sbjct: 640 PVAIHPSSVLFHCKPACVVYTSLLYTNKCYMRDLCVVDAEWLYEAAPDYF 689


>sp|P53131|PRP43_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
           OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
           GN=PRP43 PE=1 SV=1
          Length = 767

 Score = 49.7 bits (117), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 35/138 (25%)

Query: 6   EVRTQLKEILIQQKMKLVSCGTD----WDVIRKCICSALFG------------------- 42
            +R+QL+ ++ +  ++L +   +    +D IRK + S  F                    
Sbjct: 618 NIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAKKRSGAKGYITVKDNQ 677

Query: 43  ---------MGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGST 93
                    +G   ++V+Y+E ++TSK Y++ VT+V  +WL E+ P ++ +    K G  
Sbjct: 678 DVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYYDLSNFQK-GDV 736

Query: 94  KRRKALEHLHEMEDQMKQ 111
           K   +LE + E  D++ +
Sbjct: 737 KL--SLERIKEKVDRLNE 752


>sp|O45244|DHX16_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4
           OS=Caenorhabditis elegans GN=mog-4 PE=1 SV=2
          Length = 1008

 Score = 47.0 bits (110), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 29/122 (23%)

Query: 1   MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF-------GMGF-------- 45
           M++ R+VR QL  +L + +++  S  TD   IRK I +  F         G         
Sbjct: 874 MKRARDVRDQLVGLLERVEIETKS-STDTIKIRKAITAGYFYNVSKLDNTGHYKTVKHKH 932

Query: 46  -------------TPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGS 92
                        TP +VVY EL+ TSKE+M+ ++ ++  WL E+ P ++  +E   + +
Sbjct: 933 TTHPHPNSCLFEETPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYYKGRELEDATN 992

Query: 93  TK 94
            K
Sbjct: 993 KK 994


>sp|Q10752|CDC28_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
            cdc28 OS=Schizosaccharomyces pombe (strain 972 / ATCC
            24843) GN=cdc28 PE=3 SV=2
          Length = 1055

 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 55/124 (44%), Gaps = 30/124 (24%)

Query: 3    KVREVRTQLKEILIQQKMKLVSCGTD-WDVIRKCICSALFGMGF---------------- 45
            + R+VR QL  +  + +++LV+  ++  D I+K I +  F                    
Sbjct: 929  RARDVRDQLANLCERVEIELVTNSSESLDPIKKAITAGYFSNAARLDRSGDSYRTVKSNQ 988

Query: 46   -------------TPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGS 92
                          P  ++Y EL++T+KEY + +T +  +WL E+ P +F  +   +   
Sbjct: 989  TVYIHPSSSVAEKKPKVIIYFELVLTTKEYCRQITEIQPEWLLEISPHYFKPENIEELQK 1048

Query: 93   TKRR 96
            T++R
Sbjct: 1049 TQKR 1052


>sp|Q20875|DHX15_CAEEL Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
           F56D2.6 OS=Caenorhabditis elegans GN=F56D2.6 PE=2 SV=1
          Length = 739

 Score = 43.1 bits (100), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/129 (22%), Positives = 57/129 (44%), Gaps = 36/129 (27%)

Query: 1   MRKVREVRTQLKEILIQQKMKLVSCGTDWDV------IRKCICSALFG------------ 42
           M+    VRTQL  ++ +  ++ VS  TD+        IRK + +  F             
Sbjct: 598 MKTADTVRTQLSRVMDKYNLRRVS--TDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYV 655

Query: 43  ---------------MGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKET 87
                          +   P++ +Y+E ++T+K +++ VT V  +WL ++ P ++ + + 
Sbjct: 656 TVKDNQLVNLHPSTVLDHKPEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDL-DN 714

Query: 88  GKSGSTKRR 96
              G TKR+
Sbjct: 715 FPDGDTKRK 723


>sp|O22899|DHX15_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
           OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1
          Length = 729

 Score = 40.4 bits (93), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 70/153 (45%), Gaps = 41/153 (26%)

Query: 1   MRKVREVRTQLKEILIQQKMKLVSCGTDWDV------IRKCICSALF------------- 41
           M+    VR QL  I+ +  +K+  C TD++       IRK + +  F             
Sbjct: 585 MKSADNVRQQLVRIMSRFNLKM--CSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYL 642

Query: 42  --------------GMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKET 87
                          +   P++V+Y+E ++T++ +++ VT + G+WL ++   ++ +   
Sbjct: 643 TVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYDLSNF 702

Query: 88  GKSGSTKRRKALEHLHEMEDQMKQAQDEIQARK 120
               + + ++ALE L++  ++ K   +E + RK
Sbjct: 703 ---PNCEAKRALEKLYKKREREK---NESKNRK 729


>sp|Q8IY37|DHX37_HUMAN Probable ATP-dependent RNA helicase DHX37 OS=Homo sapiens GN=DHX37
            PE=1 SV=1
          Length = 1157

 Score = 40.0 bits (92), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 26/35 (74%)

Query: 47   PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMF 81
            P++VVY E++ T+K YM+ V++V+ QW+  L P +
Sbjct: 977  PEFVVYQEIVETTKMYMKGVSSVEVQWIPALLPSY 1011


>sp|O43143|DHX15_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
           OS=Homo sapiens GN=DHX15 PE=1 SV=2
          Length = 795

 Score = 39.7 bits (91), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 11/40 (27%), Positives = 27/40 (67%)

Query: 47  PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKE 86
           P++V+Y+E ++T+K Y++  T +  +WL ++ P ++ +  
Sbjct: 731 PEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770


>sp|O35286|DHX15_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
           OS=Mus musculus GN=Dhx15 PE=2 SV=2
          Length = 795

 Score = 39.7 bits (91), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 11/40 (27%), Positives = 27/40 (67%)

Query: 47  PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKE 86
           P++V+Y+E ++T+K Y++  T +  +WL ++ P ++ +  
Sbjct: 731 PEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770


>sp|Q5RAZ4|DHX15_PONAB Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
           OS=Pongo abelii GN=DHX15 PE=2 SV=2
          Length = 795

 Score = 39.7 bits (91), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 11/40 (27%), Positives = 27/40 (67%)

Query: 47  PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKE 86
           P++V+Y+E ++T+K Y++  T +  +WL ++ P ++ +  
Sbjct: 731 PEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770


>sp|Q03319|PRH1_SCHPO Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces
           pombe (strain 972 / ATCC 24843) GN=prh1 PE=3 SV=2
          Length = 719

 Score = 38.1 bits (87), Expect = 0.022,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 2/50 (4%)

Query: 38  SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKET 87
           S+LFG     + ++YHEL+ T+K Y++ V+++   WL  + P + + + T
Sbjct: 672 SSLFGKKV--EAIMYHELVFTTKSYVRGVSSIRSNWLNAVAPHYLARRST 719


>sp|P34305|RHA2_CAEEL Putative ATP-dependent RNA helicase rha-2 OS=Caenorhabditis elegans
           GN=rha-2 PE=3 SV=2
          Length = 1148

 Score = 37.0 bits (84), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 3/55 (5%)

Query: 37  CSALFGMGFTPDYVVYHELI-MTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKS 90
           CS +F     P++V+Y EL+ +  K+ M  V AVD +WL+ L   + +  E  K+
Sbjct: 947 CSVVFTE--EPEFVIYQELVQVNEKKLMTSVCAVDKEWLSRLAESYCNYGEQDKN 999


>sp|P0CE10|Y4102_ARATH Putative uncharacterized protein At4g01020, chloroplastic
           OS=Arabidopsis thaliana GN=At4g01020 PE=4 SV=1
          Length = 1787

 Score = 35.8 bits (81), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 23/41 (56%)

Query: 39  ALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGP 79
           +L   G  P +VV+ EL+    +Y+ CVTA D + L  L P
Sbjct: 896 SLLAFGQKPSWVVFGELLSIVDQYLVCVTAFDFEALYMLDP 936


>sp|Q7MV54|SYA_PORGI Alanine--tRNA ligase OS=Porphyromonas gingivalis (strain ATCC
           BAA-308 / W83) GN=alaS PE=3 SV=1
          Length = 876

 Score = 35.0 bits (79), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 19/130 (14%)

Query: 28  DWDVIRKCICSALFGMGFT---PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSV 84
           DW V+R+   S   G  FT    + + Y ++   +KEY Q V + D  + AE+G     V
Sbjct: 453 DWVVLREG-ESKFSGYDFTETETEILRYRQVKQKNKEYFQVVLS-DTPFYAEMGG---QV 507

Query: 85  KETGK----SG------STKRRKALEHLHEMEDQMKQAQDEIQARKEEEERRQAQVSSRV 134
            ++G+    SG       TKR   L  +H M+   +   D   AR  +++RRQA+ +   
Sbjct: 508 GDSGQLIDESGVAYDIFDTKRENNLS-VHLMKKLPESTTDTFVARINQDKRRQAEANHTA 566

Query: 135 GEILTPGLKE 144
             +L   L+E
Sbjct: 567 THLLHEALRE 576


>sp|P33332|SEC3_YEAST Exocyst complex component SEC3 OS=Saccharomyces cerevisiae (strain
           ATCC 204508 / S288c) GN=SEC3 PE=1 SV=1
          Length = 1336

 Score = 34.7 bits (78), Expect = 0.28,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 27/41 (65%)

Query: 89  KSGSTKRRKALEHLHEMEDQMKQAQDEIQARKEEEERRQAQ 129
           K    KR+  LEH  ++E++ ++ Q E++A+K+ E +RQ Q
Sbjct: 369 KQEERKRQMELEHQRQLEEEERKRQMELEAKKQMELKRQRQ 409


>sp|P20095|PRP2_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
           PRP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
           S288c) GN=PRP2 PE=1 SV=1
          Length = 876

 Score = 34.3 bits (77), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 13/35 (37%), Positives = 24/35 (68%), Gaps = 1/35 (2%)

Query: 49  YVVYHELIMTSKEYMQ-CVTAVDGQWLAELGPMFF 82
           YV+Y +L++TSKE+++ C+     +WL ++ P  F
Sbjct: 829 YVLYQQLMLTSKEFIRDCLVIPKEEWLIDMVPQIF 863


>sp|Q6PE54|DHX40_MOUSE Probable ATP-dependent RNA helicase DHX40 OS=Mus musculus GN=Dhx40
           PE=2 SV=1
          Length = 779

 Score = 32.0 bits (71), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 11/48 (22%), Positives = 27/48 (56%)

Query: 48  DYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKR 95
           +++++HE+++T+K Y + V  +  +W+ +L P    +     S   +R
Sbjct: 666 EWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHELNAHDLSSVARR 713


>sp|Q5XI69|DHX40_RAT Probable ATP-dependent RNA helicase DHX40 OS=Rattus norvegicus
           GN=Dhx40 PE=2 SV=1
          Length = 779

 Score = 32.0 bits (71), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 11/48 (22%), Positives = 27/48 (56%)

Query: 48  DYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKR 95
           +++++HE+++T+K Y + V  +  +W+ +L P    +     S   +R
Sbjct: 666 EWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHELNAHDLSSVARR 713


>sp|Q5R864|DHX40_PONAB Probable ATP-dependent RNA helicase DHX40 OS=Pongo abelii GN=DHX40
           PE=2 SV=1
          Length = 779

 Score = 32.0 bits (71), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 2/71 (2%)

Query: 48  DYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKR--RKALEHLHEM 105
           +++V+HE+++T+K Y + V  +  +W+ +L P          S   +R  R+        
Sbjct: 666 EWIVFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRWTN 725

Query: 106 EDQMKQAQDEI 116
           ++ +KQ +D I
Sbjct: 726 KENVKQLKDGI 736


>sp|Q8IX18|DHX40_HUMAN Probable ATP-dependent RNA helicase DHX40 OS=Homo sapiens GN=DHX40
           PE=1 SV=2
          Length = 779

 Score = 31.2 bits (69), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 2/71 (2%)

Query: 48  DYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKR--RKALEHLHEM 105
           +++++HE+++T+K Y + V  +  +W+ +L P          S   +R  R+        
Sbjct: 666 EWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRWTN 725

Query: 106 EDQMKQAQDEI 116
           ++ +KQ +D I
Sbjct: 726 KENVKQLKDGI 736


>sp|Q9GQF1|JIP3_DROME JNK-interacting protein 3 OS=Drosophila melanogaster GN=syd PE=1
           SV=1
          Length = 1227

 Score = 31.2 bits (69), Expect = 3.0,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 29/50 (58%)

Query: 84  VKETGKSGSTKRRKALEHLHEMEDQMKQAQDEIQARKEEEERRQAQVSSR 133
           V+E   +    R K  + + E+ED++K+A+++++ +  E+E     ++ R
Sbjct: 404 VREELNAMQQSRTKLRQRISELEDELKKAKEQVKQQNTEQEENDVPLAQR 453


>sp|P29413|CALR_DROME Calreticulin OS=Drosophila melanogaster GN=Crc PE=1 SV=2
          Length = 406

 Score = 30.8 bits (68), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 5/79 (6%)

Query: 54  ELIMTSKEYMQ---CVTAVDGQWLAELGPMFFSVKETGKSG-STKRRKALEHLHEMEDQM 109
           E +   K Y++   C    D  W  + G +F +V  T     + K    +++    E +M
Sbjct: 298 EYVPDDKLYLRKEICTLGFD-LWQVKSGTIFDNVLITDDVELAAKAAAEVKNTQAGEKKM 356

Query: 110 KQAQDEIQARKEEEERRQA 128
           K+AQDE+Q +K+EEE ++A
Sbjct: 357 KEAQDEVQRKKDEEEAKKA 375


>sp|Q2H991|FYV10_CHAGB Protein FYV10 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51
           / DSM 1962 / NBRC 6347 / NRRL 1970) GN=FYV10 PE=3 SV=1
          Length = 441

 Score = 30.0 bits (66), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 3/57 (5%)

Query: 84  VKETGK---SGSTKRRKALEHLHEMEDQMKQAQDEIQARKEEEERRQAQVSSRVGEI 137
           VKET     SG    + A+E+L +M  +M+  + ++ A  +EE+R   Q+ SRV  +
Sbjct: 51  VKETANGLISGKASPQDAVENLDQMLVKMRGLKRKLTAAAKEEDRLYRQMDSRVAHL 107


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.133    0.391 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,492,521
Number of Sequences: 539616
Number of extensions: 2335707
Number of successful extensions: 16577
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 165
Number of HSP's that attempted gapping in prelim test: 15820
Number of HSP's gapped (non-prelim): 866
length of query: 162
length of database: 191,569,459
effective HSP length: 108
effective length of query: 54
effective length of database: 133,290,931
effective search space: 7197710274
effective search space used: 7197710274
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)