Your job contains 1 sequence.
>psy17351
MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALFGMGFTPDYVVYHELIMTSK
EYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRKALEHLHEMEDQMKQAQDEIQARK
EEEERRQAQVSSRVGEILTPGLKETAPGTPYTPRRTPKRFGL
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17351
(162 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|B4DVG8 - symbol:DHX38 "Uncharacterized protein"... 363 3.4e-50 2
UNIPROTKB|F1S3A8 - symbol:DHX38 "Uncharacterized protein"... 363 1.2e-48 2
ZFIN|ZDB-GENE-040426-1144 - symbol:dhx38 "DEAH (Asp-Glu-A... 366 1.6e-48 2
UNIPROTKB|E1C094 - symbol:E1C094 "Uncharacterized protein... 363 5.5e-48 2
UNIPROTKB|F1NY80 - symbol:F1NY80 "Uncharacterized protein... 363 5.6e-48 2
UNIPROTKB|F1MVJ1 - symbol:DHX38 "Pre-mRNA-splicing factor... 363 8.3e-48 2
UNIPROTKB|E2RC56 - symbol:DHX38 "Uncharacterized protein"... 363 8.3e-48 2
UNIPROTKB|Q17R09 - symbol:DHX38 "Pre-mRNA-splicing factor... 363 8.3e-48 2
UNIPROTKB|Q92620 - symbol:DHX38 "Pre-mRNA-splicing factor... 363 8.3e-48 2
RGD|1310345 - symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box po... 363 8.4e-48 2
FB|FBgn0026713 - symbol:l(1)G0007 "lethal (1) G0007" spec... 344 2.0e-44 2
WB|WBGene00003389 - symbol:mog-1 species:6239 "Caenorhabd... 264 1.4e-33 2
UNIPROTKB|P34498 - symbol:mog-1 "Probable pre-mRNA-splici... 264 1.4e-33 2
UNIPROTKB|G4MTU4 - symbol:MGG_11351 "Pre-mRNA-splicing fa... 228 5.1e-30 2
ASPGD|ASPL0000014477 - symbol:AN4032 species:162425 "Emer... 216 1.8e-29 2
DICTYBASE|DDB_G0285843 - symbol:helD "putative RNA splici... 223 3.7e-28 2
POMBASE|SPBC1711.17 - symbol:prp16 "ATP-dependent RNA hel... 186 3.4e-21 2
SGD|S000001794 - symbol:PRP16 "DEAH-box RNA helicase invo... 157 4.6e-19 2
GENEDB_PFALCIPARUM|MAL13P1.322 - symbol:MAL13P1.322 "spli... 171 2.2e-18 2
UNIPROTKB|C0H5K5 - symbol:MAL13P1.322 "Splicing factor, p... 171 2.2e-18 2
WB|WBGene00003393 - symbol:mog-5 species:6239 "Caenorhabd... 156 1.9e-16 2
UNIPROTKB|Q09530 - symbol:mog-5 "Probable pre-mRNA-splici... 156 1.9e-16 2
DICTYBASE|DDB_G0291183 - symbol:dhx8 "putative RNA splici... 162 2.8e-16 2
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 163 3.9e-16 2
UNIPROTKB|F1S1H3 - symbol:DHX8 "Uncharacterized protein" ... 160 8.1e-16 2
UNIPROTKB|E2R9R9 - symbol:DHX8 "Uncharacterized protein" ... 160 8.2e-16 2
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 160 8.2e-16 2
UNIPROTKB|F1MEM4 - symbol:DHX8 "Uncharacterized protein" ... 160 8.4e-16 2
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 160 8.6e-16 2
MGI|MGI:1306823 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box... 160 8.6e-16 2
UNIPROTKB|F1P306 - symbol:LOC100858239 "Uncharacterized p... 160 1.2e-15 2
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 157 2.7e-15 2
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 137 4.7e-15 2
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 149 1.3e-13 2
SGD|S000000815 - symbol:PRP22 "DEAH-box RNA-dependent ATP... 131 7.8e-13 2
CGD|CAL0005059 - symbol:orf19.2818 species:5476 "Candida ... 141 8.2e-13 2
POMBASE|SPAC10F6.02c - symbol:prp22 "ATP-dependent RNA he... 130 3.4e-12 2
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 168 3.3e-11 1
UNIPROTKB|Q5JP46 - symbol:DHX16 "Putative pre-mRNA-splici... 111 9.1e-11 2
UNIPROTKB|Q5SQH5 - symbol:DHX16 "Putative pre-mRNA-splici... 111 9.1e-11 2
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 131 1.2e-10 2
ZFIN|ZDB-GENE-070410-11 - symbol:zgc:158828 "zgc:158828" ... 123 1.5e-10 2
RGD|1302963 - symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box po... 110 1.6e-10 2
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 124 2.5e-10 2
UNIPROTKB|F1PGL2 - symbol:DHX16 "Uncharacterized protein"... 113 2.6e-10 2
UNIPROTKB|O60231 - symbol:DHX16 "Putative pre-mRNA-splici... 111 4.1e-10 2
UNIPROTKB|E1BF68 - symbol:DHX16 "Uncharacterized protein"... 110 5.3e-10 2
UNIPROTKB|E1C4U5 - symbol:DHX35 "Uncharacterized protein"... 119 8.3e-10 2
UNIPROTKB|F1RU83 - symbol:DHX16 "Putative pre-mRNA-splici... 108 8.6e-10 2
UNIPROTKB|Q767K6 - symbol:DHX16 "Putative pre-mRNA-splici... 108 8.6e-10 2
FB|FBgn0086444 - symbol:l(2)37Cb "lethal (2) 37Cb" specie... 122 1.2e-09 2
UNIPROTKB|F5GXM6 - symbol:DHX35 "Probable ATP-dependent R... 113 1.5e-09 2
UNIPROTKB|Q9H5Z1 - symbol:DHX35 "Probable ATP-dependent R... 113 1.7e-09 2
UNIPROTKB|D3ZZG1 - symbol:Dhx35 "Protein Dhx35" species:1... 113 1.7e-09 2
UNIPROTKB|Q5THR1 - symbol:DHX35 "Probable ATP-dependent R... 147 2.8e-09 1
RGD|1311165 - symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box po... 147 2.8e-09 1
ASPGD|ASPL0000070923 - symbol:AN4721 species:162425 "Emer... 150 2.9e-09 1
DICTYBASE|DDB_G0285937 - symbol:dhx16 "putative RNA splic... 105 4.5e-09 2
UNIPROTKB|E1BDN4 - symbol:DHX35 "Uncharacterized protein"... 112 4.5e-09 2
ZFIN|ZDB-GENE-030131-8589 - symbol:dhx16 "DEAH (Asp-Glu-A... 112 9.3e-09 2
UNIPROTKB|F1SDW0 - symbol:DHX35 "Uncharacterized protein"... 109 9.9e-09 2
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 124 1.2e-08 2
UNIPROTKB|G4NFJ0 - symbol:MGG_08807 "Pre-mRNA-splicing fa... 141 2.6e-08 1
ASPGD|ASPL0000006947 - symbol:AN5827 species:162425 "Emer... 112 3.5e-08 2
UNIPROTKB|F1MWZ4 - symbol:F1MWZ4 "Uncharacterized protein... 94 1.4e-07 2
UNIPROTKB|E2RQN1 - symbol:DHX35 "Uncharacterized protein"... 106 1.6e-07 2
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 129 5.3e-07 1
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 129 5.3e-07 1
DICTYBASE|DDB_G0270110 - symbol:dhx33 "DEAD/DEAH box heli... 96 9.1e-07 2
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 107 1.3e-06 2
UNIPROTKB|F1PRA1 - symbol:DHX33 "Uncharacterized protein"... 88 1.4e-06 2
TAIR|locus:2197965 - symbol:AT1G26370 species:3702 "Arabi... 100 1.7e-06 2
UNIPROTKB|Q05BE5 - symbol:DHX33 "DEAH (Asp-Glu-Ala-His) b... 89 2.3e-06 2
UNIPROTKB|G4N1N4 - symbol:MGG_07501 "ATP-dependent RNA he... 106 2.5e-06 2
UNIPROTKB|I3L1L6 - symbol:DHX33 "Putative ATP-dependent R... 89 4.1e-06 2
UNIPROTKB|Q9H6R0 - symbol:DHX33 "Putative ATP-dependent R... 89 5.7e-06 2
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 116 6.9e-06 1
UNIPROTKB|G4NHA6 - symbol:MGG_03893 "Pre-mRNA-splicing fa... 101 9.0e-06 2
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 100 9.2e-06 2
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 103 1.0e-05 2
UNIPROTKB|O45244 - symbol:mog-4 "Probable pre-mRNA-splici... 103 1.0e-05 2
RGD|1307239 - symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box po... 81 1.9e-05 2
MGI|MGI:2445102 - symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) bo... 81 2.9e-05 2
UNIPROTKB|E2RQN7 - symbol:DHX35 "Uncharacterized protein"... 107 5.6e-05 1
POMBASE|SPBC19C2.01 - symbol:cdc28 "ATP-dependent RNA hel... 102 7.6e-05 2
DICTYBASE|DDB_G0269306 - symbol:dhx35 "DEAD/DEAH box heli... 102 0.00016 2
UNIPROTKB|E1BYA5 - symbol:DHX33 "Uncharacterized protein"... 80 0.00036 2
WB|WBGene00018967 - symbol:F56D2.6 species:6239 "Caenorha... 98 0.00083 2
UNIPROTKB|Q20875 - symbol:F56D2.6 "Putative pre-mRNA-spli... 98 0.00083 2
>UNIPROTKB|B4DVG8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC009087
UniGene:Hs.151218 HGNC:HGNC:17211 ChiTaRS:DHX38 EMBL:AK301074
IPI:IPI00909589 SMR:B4DVG8 STRING:B4DVG8 Ensembl:ENST00000536867
UCSC:uc010vmp.2 HOVERGEN:HBG093770 Uniprot:B4DVG8
Length = 539
Score = 363 (132.8 bits), Expect = 3.4e-50, Sum P(2) = 3.4e-50
Identities = 72/125 (57%), Positives = 86/125 (68%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
S+LFGMG+TPDY+VYHEL+MT+KEYMQCVTAVDG+WLAELGPMF+SVK+ GKS RR+
Sbjct: 417 SSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRR 476
Query: 98 ALEHLHEMEDQMKQAQDXXXXXXXXXXXXXXXVSSRVGEILTPGLKETAPGTPYTPRRTP 157
A E ME++M A++ S R +I TPG KE G P TPRRTP
Sbjct: 477 AKEEASAMEEEMALAEEQLRARRQEQEKRSPLGSVRSTKIYTPGRKEQ--GEPMTPRRTP 534
Query: 158 KRFGL 162
RFGL
Sbjct: 535 ARFGL 539
Score = 179 (68.1 bits), Expect = 3.4e-50, Sum P(2) = 3.4e-50
Identities = 30/41 (73%), Positives = 37/41 (90%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
MRKVREVR QLK+I++QQ+M L SCGTDWD++RKCIC+A F
Sbjct: 350 MRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYF 390
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 363 (132.8 bits), Expect = 1.2e-48, Sum P(2) = 1.2e-48
Identities = 72/125 (57%), Positives = 86/125 (68%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
S+LFGMG+TPDY+VYHEL+MT+KEYMQCVTAVDG+WLAELGPMF+SVK+ GKS RR+
Sbjct: 644 SSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRR 703
Query: 98 ALEHLHEMEDQMKQAQDXXXXXXXXXXXXXXXVSSRVGEILTPGLKETAPGTPYTPRRTP 157
A E ME++M A++ S R +I TPG KE G P TPRRTP
Sbjct: 704 AKEEASAMEEEMALAEEQLRARRQEQEKRSPLGSVRSTKIYTPGRKEQ--GEPMTPRRTP 761
Query: 158 KRFGL 162
RFGL
Sbjct: 762 ARFGL 766
Score = 179 (68.1 bits), Expect = 1.2e-48, Sum P(2) = 1.2e-48
Identities = 30/41 (73%), Positives = 37/41 (90%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
MRKVREVR QLK+I++QQ+M L SCGTDWD++RKCIC+A F
Sbjct: 577 MRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYF 617
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 366 (133.9 bits), Expect = 1.6e-48, Sum P(2) = 1.6e-48
Identities = 71/125 (56%), Positives = 86/125 (68%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
SALFGMG+TPDY++YHEL+MT+KEYMQCVTAVDG+WLAELGPMF+S+K GKS RR+
Sbjct: 1136 SALFGMGYTPDYIIYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGKSRQENRRR 1195
Query: 98 ALEHLHEMEDQMKQAQDXXXXXXXXXXXXXXXVSSRVGEILTPGLKETAPGTPYTPRRTP 157
A E + ME++M AQ+ S R +I TPG KE TP TP+RTP
Sbjct: 1196 AKEEITNMEEEMSLAQEQIRARKEEQDRKNNLGSVRAVKICTPGRKEEM--TPMTPKRTP 1253
Query: 158 KRFGL 162
RFGL
Sbjct: 1254 ARFGL 1258
Score = 183 (69.5 bits), Expect = 1.6e-48, Sum P(2) = 1.6e-48
Identities = 32/41 (78%), Positives = 38/41 (92%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
MRKVREVR QLK+I++QQKM L+SCG+DWDVIRKCIC+A F
Sbjct: 1069 MRKVREVRAQLKDIMVQQKMNLISCGSDWDVIRKCICAAYF 1109
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 363 (132.8 bits), Expect = 5.5e-48, Sum P(2) = 5.5e-48
Identities = 71/125 (56%), Positives = 86/125 (68%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
S+LFGMG+TPDY+VYHEL+MT+KEYMQCVTAVDG+WLAELGPMF+S+K GKS RR+
Sbjct: 1042 SSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGKSRQENRRR 1101
Query: 98 ALEHLHEMEDQMKQAQDXXXXXXXXXXXXXXXVSSRVGEILTPGLKETAPGTPYTPRRTP 157
A E ME++M A++ S+R +I TPG KE G P TPRRTP
Sbjct: 1102 AKEEASAMEEEMALAEEQLRARREEQERRNPLGSARCTKIYTPGRKEQ--GEPLTPRRTP 1159
Query: 158 KRFGL 162
RFGL
Sbjct: 1160 ARFGL 1164
Score = 180 (68.4 bits), Expect = 5.5e-48, Sum P(2) = 5.5e-48
Identities = 31/41 (75%), Positives = 37/41 (90%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
MRKVREVR QLK+I++QQ+M L SCGTDWDV+RKCIC+A F
Sbjct: 975 MRKVREVRAQLKDIMVQQRMSLASCGTDWDVVRKCICAAYF 1015
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 363 (132.8 bits), Expect = 5.6e-48, Sum P(2) = 5.6e-48
Identities = 71/125 (56%), Positives = 86/125 (68%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
S+LFGMG+TPDY+VYHEL+MT+KEYMQCVTAVDG+WLAELGPMF+S+K GKS RR+
Sbjct: 1048 SSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGKSRQENRRR 1107
Query: 98 ALEHLHEMEDQMKQAQDXXXXXXXXXXXXXXXVSSRVGEILTPGLKETAPGTPYTPRRTP 157
A E ME++M A++ S+R +I TPG KE G P TPRRTP
Sbjct: 1108 AKEEASAMEEEMALAEEQLRARREEQERRNPLGSARCTKIYTPGRKEQ--GEPLTPRRTP 1165
Query: 158 KRFGL 162
RFGL
Sbjct: 1166 ARFGL 1170
Score = 180 (68.4 bits), Expect = 5.6e-48, Sum P(2) = 5.6e-48
Identities = 31/41 (75%), Positives = 37/41 (90%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
MRKVREVR QLK+I++QQ+M L SCGTDWDV+RKCIC+A F
Sbjct: 981 MRKVREVRAQLKDIMVQQRMSLASCGTDWDVVRKCICAAYF 1021
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 363 (132.8 bits), Expect = 8.3e-48, Sum P(2) = 8.3e-48
Identities = 72/125 (57%), Positives = 86/125 (68%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
S+LFGMG+TPDY+VYHEL+MT+KEYMQCVTAVDG+WLAELGPMF+SVK+ GKS RR+
Sbjct: 1104 SSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRR 1163
Query: 98 ALEHLHEMEDQMKQAQDXXXXXXXXXXXXXXXVSSRVGEILTPGLKETAPGTPYTPRRTP 157
A E ME++M A++ S R +I TPG KE G P TPRRTP
Sbjct: 1164 AKEEASAMEEEMALAEEQLRARRQEQEKRSPLGSVRSTKIYTPGRKEQ--GEPMTPRRTP 1221
Query: 158 KRFGL 162
RFGL
Sbjct: 1222 ARFGL 1226
Score = 179 (68.1 bits), Expect = 8.3e-48, Sum P(2) = 8.3e-48
Identities = 30/41 (73%), Positives = 37/41 (90%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
MRKVREVR QLK+I++QQ+M L SCGTDWD++RKCIC+A F
Sbjct: 1037 MRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYF 1077
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 363 (132.8 bits), Expect = 8.3e-48, Sum P(2) = 8.3e-48
Identities = 72/125 (57%), Positives = 86/125 (68%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
S+LFGMG+TPDY+VYHEL+MT+KEYMQCVTAVDG+WLAELGPMF+SVK+ GKS RR+
Sbjct: 1104 SSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRR 1163
Query: 98 ALEHLHEMEDQMKQAQDXXXXXXXXXXXXXXXVSSRVGEILTPGLKETAPGTPYTPRRTP 157
A E ME++M A++ S R +I TPG KE G P TPRRTP
Sbjct: 1164 AKEEASAMEEEMALAEEQLRARRQEQEKRSPLGSVRSTKIYTPGRKEQ--GEPMTPRRTP 1221
Query: 158 KRFGL 162
RFGL
Sbjct: 1222 ARFGL 1226
Score = 179 (68.1 bits), Expect = 8.3e-48, Sum P(2) = 8.3e-48
Identities = 30/41 (73%), Positives = 37/41 (90%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
MRKVREVR QLK+I++QQ+M L SCGTDWD++RKCIC+A F
Sbjct: 1037 MRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYF 1077
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 363 (132.8 bits), Expect = 8.3e-48, Sum P(2) = 8.3e-48
Identities = 72/125 (57%), Positives = 86/125 (68%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
S+LFGMG+TPDY+VYHEL+MT+KEYMQCVTAVDG+WLAELGPMF+SVK+ GKS RR+
Sbjct: 1105 SSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRR 1164
Query: 98 ALEHLHEMEDQMKQAQDXXXXXXXXXXXXXXXVSSRVGEILTPGLKETAPGTPYTPRRTP 157
A E ME++M A++ S R +I TPG KE G P TPRRTP
Sbjct: 1165 AKEEASAMEEEMALAEEQLRARRQEQEKRSPLGSVRSTKIYTPGRKEQ--GEPMTPRRTP 1222
Query: 158 KRFGL 162
RFGL
Sbjct: 1223 ARFGL 1227
Score = 179 (68.1 bits), Expect = 8.3e-48, Sum P(2) = 8.3e-48
Identities = 30/41 (73%), Positives = 37/41 (90%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
MRKVREVR QLK+I++QQ+M L SCGTDWD++RKCIC+A F
Sbjct: 1038 MRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYF 1078
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 363 (132.8 bits), Expect = 8.3e-48, Sum P(2) = 8.3e-48
Identities = 72/125 (57%), Positives = 86/125 (68%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
S+LFGMG+TPDY+VYHEL+MT+KEYMQCVTAVDG+WLAELGPMF+SVK+ GKS RR+
Sbjct: 1105 SSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRR 1164
Query: 98 ALEHLHEMEDQMKQAQDXXXXXXXXXXXXXXXVSSRVGEILTPGLKETAPGTPYTPRRTP 157
A E ME++M A++ S R +I TPG KE G P TPRRTP
Sbjct: 1165 AKEEASAMEEEMALAEEQLRARRQEQEKRSPLGSVRSTKIYTPGRKEQ--GEPMTPRRTP 1222
Query: 158 KRFGL 162
RFGL
Sbjct: 1223 ARFGL 1227
Score = 179 (68.1 bits), Expect = 8.3e-48, Sum P(2) = 8.3e-48
Identities = 30/41 (73%), Positives = 37/41 (90%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
MRKVREVR QLK+I++QQ+M L SCGTDWD++RKCIC+A F
Sbjct: 1038 MRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYF 1078
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 363 (132.8 bits), Expect = 8.4e-48, Sum P(2) = 8.4e-48
Identities = 72/125 (57%), Positives = 86/125 (68%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
S+LFGMG+TPDY+VYHEL+MT+KEYMQCVTAVDG+WLAELGPMF+SVK+ GKS RR+
Sbjct: 1106 SSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRR 1165
Query: 98 ALEHLHEMEDQMKQAQDXXXXXXXXXXXXXXXVSSRVGEILTPGLKETAPGTPYTPRRTP 157
A E ME++M A++ S R +I TPG KE G P TPRRTP
Sbjct: 1166 AKEEASAMEEEMALAEEQLRARRQEQEKRSPLGSVRSTKIYTPGRKEQ--GEPMTPRRTP 1223
Query: 158 KRFGL 162
RFGL
Sbjct: 1224 ARFGL 1228
Score = 179 (68.1 bits), Expect = 8.4e-48, Sum P(2) = 8.4e-48
Identities = 30/41 (73%), Positives = 37/41 (90%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
MRKVREVR QLK+I++QQ+M L SCGTDWD++RKCIC+A F
Sbjct: 1039 MRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYF 1079
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 344 (126.2 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 73/125 (58%), Positives = 87/125 (69%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
SAL+G+G TPDYVVYHELIMT+KEYMQC TAVDG WLAELGPMFFSVKE+G+SG K+++
Sbjct: 1107 SALYGLGTTPDYVVYHELIMTAKEYMQCATAVDGYWLAELGPMFFSVKESGRSGREKKKQ 1166
Query: 98 ALEHLHEMEDQMKQAQDXXXXXXXXXXXXXXXVSSRVGEILTPGLKETAPGTPYTPRRTP 157
A EHL EME+QM +AQ ++++ EI TPG A TPRRTP
Sbjct: 1167 AAEHLKEMEEQMLKAQHEMEERKQQAAEREEQLATKQ-EIATPG---NA-----TPRRTP 1217
Query: 158 KRFGL 162
R GL
Sbjct: 1218 ARIGL 1222
Score = 166 (63.5 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 28/41 (68%), Positives = 35/41 (85%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
MRKVREVR QLK+I+ QQ + ++SCG DWD++RKCICSA F
Sbjct: 1040 MRKVREVRQQLKDIMTQQNLSVISCGIDWDIVRKCICSAYF 1080
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 264 (98.0 bits), Expect = 1.4e-33, Sum P(2) = 1.4e-33
Identities = 49/76 (64%), Positives = 62/76 (81%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
SALFGMGF PDYVVYHELIMT+KEYMQCVTAVD WLAELGPMF+S+KE+ +S + +
Sbjct: 1015 SALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSIKESKQSRKELKME 1074
Query: 98 ALEHLHEMEDQMKQAQ 113
++ + ME +M++AQ
Sbjct: 1075 SVRTVETMEAEMREAQ 1090
Score = 143 (55.4 bits), Expect = 1.4e-33, Sum P(2) = 1.4e-33
Identities = 25/41 (60%), Positives = 34/41 (82%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
++KVREVR QLKEI+ K+ L+S G++WD++RKCICSA F
Sbjct: 948 LKKVREVRAQLKEIMQDLKLPLISNGSEWDIVRKCICSAYF 988
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 264 (98.0 bits), Expect = 1.4e-33, Sum P(2) = 1.4e-33
Identities = 49/76 (64%), Positives = 62/76 (81%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
SALFGMGF PDYVVYHELIMT+KEYMQCVTAVD WLAELGPMF+S+KE+ +S + +
Sbjct: 1015 SALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSIKESKQSRKELKME 1074
Query: 98 ALEHLHEMEDQMKQAQ 113
++ + ME +M++AQ
Sbjct: 1075 SVRTVETMEAEMREAQ 1090
Score = 143 (55.4 bits), Expect = 1.4e-33, Sum P(2) = 1.4e-33
Identities = 25/41 (60%), Positives = 34/41 (82%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
++KVREVR QLKEI+ K+ L+S G++WD++RKCICSA F
Sbjct: 948 LKKVREVRAQLKEIMQDLKLPLISNGSEWDIVRKCICSAYF 988
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 228 (85.3 bits), Expect = 5.1e-30, Sum P(2) = 5.1e-30
Identities = 45/77 (58%), Positives = 56/77 (72%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
SAL+G+GF PDYVVYHELI+TSKEYM VT+VD WLA+LG +F+SVKE G S KR
Sbjct: 876 SALYGLGFLPDYVVYHELILTSKEYMSTVTSVDPMWLADLGGVFYSVKEKGYSARDKRVV 935
Query: 98 ALEHLHEMEDQMKQAQD 114
E +ME + + A+D
Sbjct: 936 ETEFNRKMEIEAQMAED 952
Score = 144 (55.7 bits), Expect = 5.1e-30, Sum P(2) = 5.1e-30
Identities = 24/41 (58%), Positives = 33/41 (80%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
+R+ +EVR QL +I+ QKM +VSCGTDWDV+R+CICS +
Sbjct: 809 LRRAKEVRDQLLDIMKTQKMDIVSCGTDWDVVRRCICSGYY 849
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 216 (81.1 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 44/77 (57%), Positives = 54/77 (70%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
SAL+G+G+ P+YVVYHELI+TSKEYM VTAVD WLAELG +F+SVKE G S +R
Sbjct: 762 SALYGLGYVPEYVVYHELILTSKEYMSTVTAVDPHWLAELGGVFYSVKEKGYSHRERRVT 821
Query: 98 ALEHLHEMEDQMKQAQD 114
E ME + + A D
Sbjct: 822 EQEFNRRMEIESQIAAD 838
Score = 150 (57.9 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 24/41 (58%), Positives = 33/41 (80%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
+R+ +EVR QL +I++ QK+ L+SCGTDWD IRKCICS +
Sbjct: 695 LRRAKEVRDQLNDIMVMQKLPLISCGTDWDEIRKCICSGFY 735
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 223 (83.6 bits), Expect = 3.7e-28, Sum P(2) = 3.7e-28
Identities = 42/60 (70%), Positives = 50/60 (83%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
SAL+G+G+ PDY+VYHEL+MTSKEYMQ VTAVD WLAE+GPMFFS+K KS K+RK
Sbjct: 1233 SALYGLGYAPDYIVYHELVMTSKEYMQIVTAVDPNWLAEMGPMFFSIK---KSLKDKKRK 1289
Score = 135 (52.6 bits), Expect = 3.7e-28, Sum P(2) = 3.7e-28
Identities = 25/41 (60%), Positives = 33/41 (80%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
MRKVREVR QL +I++Q MK+ SCG++WD+IRK I S+ F
Sbjct: 1166 MRKVREVRGQLLDIMVQHDMKVESCGSNWDIIRKAITSSYF 1206
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 186 (70.5 bits), Expect = 3.4e-21, Sum P(2) = 3.4e-21
Identities = 31/51 (60%), Positives = 43/51 (84%)
Query: 36 ICSALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKE 86
+ S+L+G+G+ PDYV+YHEL++TSKEYM VT+VD WLAE G +++SVKE
Sbjct: 1062 VTSSLYGLGYLPDYVIYHELVLTSKEYMNIVTSVDPYWLAEFGGVYYSVKE 1112
Score = 104 (41.7 bits), Expect = 3.4e-21, Sum P(2) = 3.4e-21
Identities = 18/41 (43%), Positives = 31/41 (75%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
+++ R++R QL EI+ +QK+ L S +DWD++R+ +CSA F
Sbjct: 998 LKRARDIRQQLVEIMSKQKISLESV-SDWDIVRRVLCSAYF 1037
Score = 34 (17.0 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 5 REVRTQLKEILIQQKMKLVSCGTDWDV 31
R RTQ++E L ++ G+ DV
Sbjct: 212 RRYRTQMEEPLSSKRRNRFGNGSRRDV 238
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 157 (60.3 bits), Expect = 4.6e-19, Sum P(2) = 4.6e-19
Identities = 35/79 (44%), Positives = 46/79 (58%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
SAL G+G P YVVYHEL+MTSKEY+ CVT+VD WL E G + + +K K+
Sbjct: 939 SALHGLGDLPPYVVYHELLMTSKEYICCVTSVDPFWLMEYGGLLYDIKRI-KNDQEATTT 997
Query: 98 AL--EHLHEMEDQMKQAQD 114
L EH D+++ D
Sbjct: 998 GLFGEHYEHTLDKVEDDID 1016
Score = 112 (44.5 bits), Expect = 4.6e-19, Sum P(2) = 4.6e-19
Identities = 19/36 (52%), Positives = 27/36 (75%)
Query: 3 KVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICS 38
+ R++R QL IL QK+ ++S G DWD+I+KCICS
Sbjct: 874 RARDIRDQLLTILKSQKIPVISSGKDWDIIKKCICS 909
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 171 (65.3 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 28/48 (58%), Positives = 40/48 (83%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVK 85
S+L+ +G+TPDYV+Y E++ T+KEYM+ VT VD +WL ELGP+FF +K
Sbjct: 1102 SSLYNIGYTPDYVIYQEIVFTTKEYMRNVTTVDPEWLCELGPLFFYMK 1149
Score = 92 (37.4 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
+ K +EV +QL +I+ +K VSC W++IRK ICS F
Sbjct: 1035 LNKAKEVYSQLIDIIKTLNIKNVSCDNKWELIRKTICSGYF 1075
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 171 (65.3 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 28/48 (58%), Positives = 40/48 (83%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVK 85
S+L+ +G+TPDYV+Y E++ T+KEYM+ VT VD +WL ELGP+FF +K
Sbjct: 1102 SSLYNIGYTPDYVIYQEIVFTTKEYMRNVTTVDPEWLCELGPLFFYMK 1149
Score = 92 (37.4 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
+ K +EV +QL +I+ +K VSC W++IRK ICS F
Sbjct: 1035 LNKAKEVYSQLIDIIKTLNIKNVSCDNKWELIRKTICSGYF 1075
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 156 (60.0 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 27/58 (46%), Positives = 42/58 (72%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRKALEHLHE 104
P++VVYHEL+MT+KEYM+ VTA+D +WL E P FF + ++ K + KR + ++ L +
Sbjct: 1121 PEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGDSTKLSTFKRNQKIDPLFD 1178
Score = 89 (36.4 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
M++ +++R QL I+ + K+ +VSCG D ++K ICS F
Sbjct: 1047 MKRAQDIRKQLLGIMDRHKLLMVSCGRDVSRVQKAICSGFF 1087
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 156 (60.0 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 27/58 (46%), Positives = 42/58 (72%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRKALEHLHE 104
P++VVYHEL+MT+KEYM+ VTA+D +WL E P FF + ++ K + KR + ++ L +
Sbjct: 1121 PEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGDSTKLSTFKRNQKIDPLFD 1178
Score = 89 (36.4 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
M++ +++R QL I+ + K+ +VSCG D ++K ICS F
Sbjct: 1047 MKRAQDIRKQLLGIMDRHKLLMVSCGRDVSRVQKAICSGFF 1087
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 162 (62.1 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 30/67 (44%), Positives = 43/67 (64%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
S LF PD+V+YHEL+MT+KEYM+ V +D +WL EL P FF + K KR++
Sbjct: 1082 STLFNRN--PDWVIYHELVMTTKEYMREVCTIDPKWLVELAPKFFKTSDPNKISKRKRKE 1139
Query: 98 ALEHLHE 104
+E L++
Sbjct: 1140 KIEPLYD 1146
Score = 81 (33.6 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
+R+ ++VR QL I+ + K+ ++S G ++ I+K ICS F
Sbjct: 1015 LRRAQDVRKQLITIMDRYKLDIISAGRNYTKIQKAICSGFF 1055
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 163 (62.4 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 32/73 (43%), Positives = 47/73 (64%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
SALF P++VVYHEL++T+KEYM+ VT +D +WL E P FF V + K K+++
Sbjct: 1108 SALFNR--QPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQ 1165
Query: 98 ALEHLHEMEDQMK 110
LE L+ + M+
Sbjct: 1166 RLEPLYNRGEGMR 1178
Score = 79 (32.9 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
+R+ +++R Q+ I+ + K+ +VSCG ++K ICS F
Sbjct: 1041 LRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFF 1081
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 160 (61.4 bits), Expect = 8.1e-16, Sum P(2) = 8.1e-16
Identities = 31/71 (43%), Positives = 46/71 (64%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
SALF P++VVYHEL++T+KEYM+ VT +D +WL E P FF V + K K+++
Sbjct: 1131 SALFNR--QPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQ 1188
Query: 98 ALEHLHEMEDQ 108
LE L+ ++
Sbjct: 1189 RLEPLYNRYEE 1199
Score = 79 (32.9 bits), Expect = 8.1e-16, Sum P(2) = 8.1e-16
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
+R+ +++R Q+ I+ + K+ +VSCG ++K ICS F
Sbjct: 1064 LRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFF 1104
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 160 (61.4 bits), Expect = 8.2e-16, Sum P(2) = 8.2e-16
Identities = 31/71 (43%), Positives = 46/71 (64%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
SALF P++VVYHEL++T+KEYM+ VT +D +WL E P FF V + K K+++
Sbjct: 1135 SALFNR--QPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQ 1192
Query: 98 ALEHLHEMEDQ 108
LE L+ ++
Sbjct: 1193 RLEPLYNRYEE 1203
Score = 79 (32.9 bits), Expect = 8.2e-16, Sum P(2) = 8.2e-16
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
+R+ +++R Q+ I+ + K+ +VSCG ++K ICS F
Sbjct: 1068 LRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFF 1108
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 160 (61.4 bits), Expect = 8.2e-16, Sum P(2) = 8.2e-16
Identities = 31/71 (43%), Positives = 46/71 (64%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
SALF P++VVYHEL++T+KEYM+ VT +D +WL E P FF V + K K+++
Sbjct: 1139 SALFNR--QPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQ 1196
Query: 98 ALEHLHEMEDQ 108
LE L+ ++
Sbjct: 1197 RLEPLYNRYEE 1207
Score = 79 (32.9 bits), Expect = 8.2e-16, Sum P(2) = 8.2e-16
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
+R+ +++R Q+ I+ + K+ +VSCG ++K ICS F
Sbjct: 1072 LRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFF 1112
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 160 (61.4 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
Identities = 31/71 (43%), Positives = 46/71 (64%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
SALF P++VVYHEL++T+KEYM+ VT +D +WL E P FF V + K K+++
Sbjct: 1149 SALFNR--QPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQ 1206
Query: 98 ALEHLHEMEDQ 108
LE L+ ++
Sbjct: 1207 RLEPLYNRYEE 1217
Score = 79 (32.9 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
+R+ +++R Q+ I+ + K+ +VSCG ++K ICS F
Sbjct: 1082 LRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFF 1122
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 160 (61.4 bits), Expect = 8.6e-16, Sum P(2) = 8.6e-16
Identities = 31/71 (43%), Positives = 46/71 (64%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
SALF P++VVYHEL++T+KEYM+ VT +D +WL E P FF V + K K+++
Sbjct: 1161 SALFNR--QPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQ 1218
Query: 98 ALEHLHEMEDQ 108
LE L+ ++
Sbjct: 1219 RLEPLYNRYEE 1229
Score = 79 (32.9 bits), Expect = 8.6e-16, Sum P(2) = 8.6e-16
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
+R+ +++R Q+ I+ + K+ +VSCG ++K ICS F
Sbjct: 1094 LRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFF 1134
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 160 (61.4 bits), Expect = 8.6e-16, Sum P(2) = 8.6e-16
Identities = 31/71 (43%), Positives = 46/71 (64%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
SALF P++VVYHEL++T+KEYM+ VT +D +WL E P FF V + K K+++
Sbjct: 1163 SALFNR--QPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQ 1220
Query: 98 ALEHLHEMEDQ 108
LE L+ ++
Sbjct: 1221 RLEPLYNRYEE 1231
Score = 79 (32.9 bits), Expect = 8.6e-16, Sum P(2) = 8.6e-16
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
+R+ +++R Q+ I+ + K+ +VSCG ++K ICS F
Sbjct: 1096 LRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFF 1136
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 160 (61.4 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 31/71 (43%), Positives = 46/71 (64%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
SALF P++VVYHEL++T+KEYM+ VT +D +WL E P FF V + K K+++
Sbjct: 1087 SALFNR--QPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQ 1144
Query: 98 ALEHLHEMEDQ 108
LE L+ ++
Sbjct: 1145 RLEPLYNRYEE 1155
Score = 77 (32.2 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
+R+ +++R Q+ I+ + K+ +VSCG ++K ICS F
Sbjct: 1020 LRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFF 1060
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 157 (60.3 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
SALF P++VVYHEL++T+KEYM+ VT +D +WL E P FF V + + K+++
Sbjct: 1129 SALFNR--QPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTRLSKQKKQQ 1186
Query: 98 ALEHLHEMEDQ 108
LE L+ ++
Sbjct: 1187 RLEPLYNRYEE 1197
Score = 77 (32.2 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
+R+ +++R Q+ I+ + K+ +VSCG ++K ICS F
Sbjct: 1062 LRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFF 1102
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 137 (53.3 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
S+L+G P YV+YH L++TSKEYM CV+ +D WL EL P +F + K+++
Sbjct: 914 SSLYGK--KPQYVIYHTLLLTSKEYMHCVSIIDPNWLYELAPKYFRPADAKTVQEIKKKQ 971
Query: 98 AL 99
+
Sbjct: 972 KI 973
Score = 93 (37.8 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
MR+ EVR QLK I+ + K +SCG D D +R+ CS F
Sbjct: 847 MRRAMEVRKQLKSIMQRFGYKTMSCGNDVDRVRRTFCSGYF 887
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 149 (57.5 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
SALF P++V+YHEL+ T+KEYM+ VT +D +WL E P FF + K K+ +
Sbjct: 1160 SALFNR--QPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPSFFRFSDPTKLSKFKKNQ 1217
Query: 98 ALEHLHEMEDQ 108
LE L+ ++
Sbjct: 1218 RLEPLYNKYEE 1228
Score = 69 (29.3 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
+++ ++VR QL I+ + K+ +VS G + I+K ICS F
Sbjct: 1093 LKRSQDVRKQLLGIMDRHKLDVVSAGKNSVRIQKAICSGFF 1133
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 131 (51.2 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 25/61 (40%), Positives = 42/61 (68%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
S+L+G + +YV+YH +++TS+EYM VT+++ QWL E+ P F+ + G + S R+K
Sbjct: 1057 SSLYGKEY--EYVMYHSIVLTSREYMSQVTSIEPQWLLEVAPHFY---KAGDAESQSRKK 1111
Query: 98 A 98
A
Sbjct: 1112 A 1112
Score = 79 (32.9 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
+++ R+V++Q+ I + +KL+SC +D D+IRK S F
Sbjct: 990 LKRARDVKSQISMIFKKIGLKLISCHSDPDLIRKTFVSGFF 1030
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 141 (54.7 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
S+L + +YV+YHEL++T KEYM CVT VD WL E G FF V ++ ++ +
Sbjct: 963 SSLLDSNLSTNYVIYHELVLTKKEYMNCVTTVDPIWLLEYGYKFFGVADSHRNKIDS--E 1020
Query: 98 ALEHLHEMEDQM---KQAQDXXXXXXXXXXXXXXXVSSRVGEI 137
A+ + + E Q+ K+ D S+RV +
Sbjct: 1021 AILNKQKFEKQLLKDKEIYDDIIKQQSKRRSNEISTSNRVSSL 1063
Score = 68 (29.0 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 12/39 (30%), Positives = 26/39 (66%)
Query: 3 KVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
+ ++++ QL I+ + K+ ++ TD D IRKC+C++ +
Sbjct: 893 RAKDIKHQLMLIMKKNKLAILKSKTD-DDIRKCLCASFY 930
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 130 (50.8 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 28/68 (41%), Positives = 38/68 (55%)
Query: 40 LFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRR-KA 98
LFG ++V+YHELI TSKEYM V+ V+ +WL E+ P FF + TK+ K
Sbjct: 1088 LFGKA--AEWVIYHELIQTSKEYMHTVSTVNPKWLVEVAPTFFKFANANQVSKTKKNLKV 1145
Query: 99 LEHLHEME 106
L + E
Sbjct: 1146 LPLYNRFE 1153
Score = 74 (31.1 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
MR+ +VR QL ++ + + +VSCG ++I + +CS F
Sbjct: 1018 MRRAEDVRKQLIRLMDRYRHPVVSCGRKRELILRALCSGYF 1058
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 168 (64.2 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
SALF PD+V+YH+L+MT+KEYM+ VT +D +WL EL P FF V + K KR++
Sbjct: 1089 SALFQR--QPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKRQE 1146
Query: 98 ALEHLHE 104
+E L++
Sbjct: 1147 RIEPLYD 1153
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 111 (44.1 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
S+LF P +++YHEL++T+KE+M+ V ++ WL E+ P ++ KE + K K
Sbjct: 493 SSLFEQ--QPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPK 550
Query: 98 ALEHLHE 104
+ E
Sbjct: 551 KIGKTRE 557
Score = 72 (30.4 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
MR+ R+VR QL+ +L + ++ L SC D+ +RK I + F
Sbjct: 427 MRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYF 467
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 111 (44.1 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
S+LF P +++YHEL++T+KE+M+ V ++ WL E+ P ++ KE + K K
Sbjct: 493 SSLFEQ--QPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPK 550
Query: 98 ALEHLHE 104
+ E
Sbjct: 551 KIGKTRE 557
Score = 72 (30.4 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
MR+ R+VR QL+ +L + ++ L SC D+ +RK I + F
Sbjct: 427 MRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYF 467
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 131 (51.2 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
P +VVYHEL++TSKEYM+ VT + +WL EL P ++ +K+ + S K K
Sbjct: 987 PRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAASKKMPK 1037
Score = 57 (25.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 12/41 (29%), Positives = 25/41 (60%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
M++ R++R QL+ +L + ++ + S + D +RK I + F
Sbjct: 913 MKRARDIRDQLEGLLERVEIDISSNLNELDSVRKSIVAGFF 953
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 123 (48.4 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
S L+G P +VV++E++ TSK YM+ VTAV+ WL EL P F+ + G S S+KR K
Sbjct: 632 SVLYGEK-PPKWVVFNEVVQTSKYYMRDVTAVESSWLVELAPHFYKQAKHG-SLSSKRAK 689
Score = 60 (26.2 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 7 VRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
VR QL+ +L + K+ S D DVI +CI S F
Sbjct: 571 VREQLRHLLNKFKVPRTSSEGDPDVILRCIVSGFF 605
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 110 (43.8 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
S+LF P +++YHEL++T+KE+M+ V ++ WL E+ P ++ KE + K K
Sbjct: 977 SSLFEQ--QPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPK 1034
Query: 98 ALEHLHE 104
+ E
Sbjct: 1035 KVGKTRE 1041
Score = 77 (32.2 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
MR+ R+VR QL+ +L + ++ L SC D+ +RK I S F
Sbjct: 911 MRRARDVREQLEGLLERVEVGLTSCQGDYVRVRKAITSGYF 951
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 124 (48.7 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
P +VVYH+L++TSKEYM+ VT + +WL E+ P ++ +K+ + S K K
Sbjct: 987 PRWVVYHQLVLTSKEYMRQVTELKPEWLIEIAPHYYQLKDVEDATSKKMPK 1037
Score = 61 (26.5 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 13/41 (31%), Positives = 25/41 (60%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
M++ R++R QL+ +L + ++ + S + D IRK I + F
Sbjct: 913 MKRARDIRDQLEGLLERVEIDVSSNANELDSIRKSIVAGFF 953
Score = 33 (16.7 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 5/14 (35%), Positives = 12/14 (85%)
Query: 3 KVREVRTQLKEILI 16
K+R + T+++E++I
Sbjct: 635 KIRGLGTKIRELII 648
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 113 (44.8 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRKALEHLHE 104
P +++YHEL++T+KE+M+ V ++ WL E+ P ++ KE S K K + E
Sbjct: 982 PRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHSKKMPKKIGKTRE 1039
Score = 72 (30.4 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
MR+ R+VR QL+ +L + ++ L SC D+ +RK I + F
Sbjct: 909 MRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYF 949
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 111 (44.1 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
S+LF P +++YHEL++T+KE+M+ V ++ WL E+ P ++ KE + K K
Sbjct: 974 SSLFEQ--QPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPK 1031
Query: 98 ALEHLHE 104
+ E
Sbjct: 1032 KIGKTRE 1038
Score = 72 (30.4 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
MR+ R+VR QL+ +L + ++ L SC D+ +RK I + F
Sbjct: 908 MRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYF 948
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 110 (43.8 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRKALEHLHE 104
P +++YHEL++T+KE+M+ V ++ WL E+ P ++ KE + K K + E
Sbjct: 985 PRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKIGKTRE 1042
Score = 72 (30.4 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
MR+ R+VR QL+ +L + ++ L SC D+ +RK I + F
Sbjct: 912 MRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYF 952
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 119 (46.9 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRKALEH 101
P +VVY+E+I T+K YM+ VTA++ WL EL P F+ + T S + KR K +H
Sbjct: 652 PRWVVYNEVIQTAKYYMRDVTAIESAWLVELAPHFYQ-QGTHLSLNAKRAKVDDH 705
Score = 57 (25.1 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 7 VRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
VR QLK++L+ K+ S D D + +CI S F
Sbjct: 583 VREQLKKLLVCFKVPKKSSEGDPDPVLRCIVSGFF 617
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 108 (43.1 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 16/40 (40%), Positives = 29/40 (72%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKE 86
P +++YHEL++T+KE+M+ V ++ WL E+ P ++ KE
Sbjct: 985 PRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKE 1024
Score = 72 (30.4 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
MR+ R+VR QL+ +L + ++ L SC D+ +RK I + F
Sbjct: 912 MRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYF 952
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 108 (43.1 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 16/40 (40%), Positives = 29/40 (72%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKE 86
P +++YHEL++T+KE+M+ V ++ WL E+ P ++ KE
Sbjct: 985 PRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKE 1024
Score = 72 (30.4 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
MR+ R+VR QL+ +L + ++ L SC D+ +RK I + F
Sbjct: 912 MRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYF 952
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 122 (48.0 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
P +V+YHEL+ TSKEYM+ V ++ +WL E+ P ++ KE S + K K
Sbjct: 835 PRWVLYHELVFTSKEYMRQVIEIESKWLLEVAPHYYKAKELEDSTNKKMPK 885
Score = 55 (24.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 12/41 (29%), Positives = 24/41 (58%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
M++ R+VR QL ++ + ++ +VSC + +RK + F
Sbjct: 761 MKRARDVREQLVGLMQRVEIDMVSCLPETVNVRKAATAGYF 801
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 113 (44.8 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
P +V+Y+E+I TSK YM+ VTA++ WL EL P F+ + T S KR K
Sbjct: 619 PRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ-QGTHLSLKAKRAK 668
Score = 60 (26.2 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 7 VRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
VR QLK++L++ ++ S D D++ +CI S F
Sbjct: 550 VREQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGFF 584
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 113 (44.8 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
P +V+Y+E+I TSK YM+ VTA++ WL EL P F+ + T S KR K
Sbjct: 650 PRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ-QGTHLSLKAKRAK 699
Score = 60 (26.2 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 7 VRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
VR QLK++L++ ++ S D D++ +CI S F
Sbjct: 581 VREQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGFF 615
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 113 (44.8 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
P +V+Y+E+I TSK YM+ VTA++ WL EL P F+ + T S KR K
Sbjct: 650 PRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ-QGTHLSLKAKRAK 699
Score = 60 (26.2 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 7 VRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
VR QLK++L++ ++ +S D D + +CI S F
Sbjct: 581 VRDQLKKLLVKFQVPKMSSEGDPDPVLRCIVSGFF 615
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 147 (56.8 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 39/96 (40%), Positives = 56/96 (58%)
Query: 7 VRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALFGMG--F--TPDY-VVYHELIMTSKE 61
VR QLK++L++ ++ S D D++ +CI S F F T Y V+Y+E+I TSK
Sbjct: 581 VREQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGFFANAARFHSTGAYRVIYNEVIQTSKY 640
Query: 62 YMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
YM+ VTA++ WL EL P F+ + T S KR K
Sbjct: 641 YMRDVTAIESAWLLELAPHFYQ-QGTHLSLKAKRAK 675
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 147 (56.8 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 39/96 (40%), Positives = 56/96 (58%)
Query: 7 VRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALFGMG--F--TPDY-VVYHELIMTSKE 61
VR QLK++L++ ++ +S D D + +CI S F F T Y V+Y+E+I TSK
Sbjct: 581 VRDQLKKLLVKFQVPKMSSEGDPDPVLRCIVSGFFANAARFHSTGAYRVIYNEVIQTSKY 640
Query: 62 YMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
YM+ VTA++ WL EL P F+ + T S KR K
Sbjct: 641 YMRDVTAIESAWLLELAPHFYQ-QGTHLSLKAKRAK 675
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 150 (57.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 26/66 (39%), Positives = 41/66 (62%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
SA+FG ++V+YH L++T+KEYM C T ++ +WL E P FF V T + K+ +
Sbjct: 1151 SAMFGK--PAEHVIYHTLVLTTKEYMHCTTGIEPKWLVEAAPTFFKVAPTDRLSKRKKAE 1208
Query: 98 ALEHLH 103
++ LH
Sbjct: 1209 RIQPLH 1214
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 105 (42.0 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKE 86
P +VVYHEL++T+KE+M+ + + WL E+ P + K+
Sbjct: 1049 PKWVVYHELVLTTKEFMRQIVEIQSSWLHEIAPHIYKEKD 1088
Score = 80 (33.2 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
M++ ++VR QL+ +L + ++ LVS D D IRKCI S F
Sbjct: 975 MKRAQDVRDQLELLLERVEIPLVSNVDDTDSIRKCIASGFF 1015
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 112 (44.5 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
P +V+Y+E+I TSK YM+ VTA++ WL EL P F+ + T S KR K
Sbjct: 650 PRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ-QGTHLSLRAKRAK 699
Score = 57 (25.1 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 7 VRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
VR QLK++L++ ++ S D D + +CI S F
Sbjct: 581 VREQLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFF 615
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 112 (44.5 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTK--RR--KALEHL 102
P +++YHEL+ T+KE+M+ V ++ WL E+ P ++ KE S S K R+ KA E L
Sbjct: 994 PRWMIYHELVFTTKEFMRQVIEIESGWLLEVAPHYYKNKELEDSSSKKMPRKQGKAREEL 1053
Score = 58 (25.5 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 13/41 (31%), Positives = 25/41 (60%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
M++ R+VR QL+ ++ + +++L S D IRK + + F
Sbjct: 921 MKRARDVRDQLEGLMDRIEVELCSSNGDSMPIRKAVTAGYF 961
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 109 (43.4 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETG 88
P +V+Y+E+I TSK YM+ VTA++ WL EL P F+ G
Sbjct: 650 PRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQGTVG 691
Score = 57 (25.1 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 7 VRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
VR QLK++L++ ++ S D D + +CI S F
Sbjct: 581 VREQLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFF 615
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 124 (48.7 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 22/70 (31%), Positives = 45/70 (64%)
Query: 42 GMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRKALEH 101
G+ TP++VVY+E ++T+K +++ VTA+ +WL EL P ++ + + + K AL+
Sbjct: 664 GLSVTPEWVVYNEFVLTTKSFIRNVTAIRPEWLIELAPNYYDLDDFDNNKEVK--SALQK 721
Query: 102 LHEMEDQMKQ 111
+++M + K+
Sbjct: 722 VYQMAARSKK 731
Score = 41 (19.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 7 VRTQLKEILIQQKMKLVSCGTD---WDV-IRKCICSALF 41
VR QL+ + +Q+++L+S D + V IR+ + S F
Sbjct: 597 VRKQLRRTMERQEVELISTPFDDKNYYVNIRRALVSGFF 635
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 141 (54.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 24/66 (36%), Positives = 43/66 (65%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
SALFG ++V+YH L++T+KEYM C T+++ +WL + P FF V + K ++++
Sbjct: 1116 SALFGKH--AEWVIYHTLVLTTKEYMHCTTSIEPKWLVDAAPTFFKVSASDKLSKRRQQE 1173
Query: 98 ALEHLH 103
++ L+
Sbjct: 1174 RIQPLY 1179
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 112 (44.5 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
S LF + P +V+Y EL++TSKEYM+ + +WL E+ P ++ K+ G+ K+ K
Sbjct: 1060 STLFEVN--PRWVIYFELVLTSKEYMRSNMPLQAEWLVEVAPHYYKKKDLETLGTEKKPK 1117
Score = 53 (23.7 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDV-IRKCICSALF 41
+ + R+VR QL ++ + ++ + SCG++ V I+K I + F
Sbjct: 991 LTRARDVRDQLAKLCDRVEVTVSSCGSNNIVPIQKAITAGFF 1032
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 94 (38.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 20/39 (51%), Positives = 24/39 (61%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVK 85
P VVY EL+ TSK YM+ + VD +WL E P FF K
Sbjct: 670 PACVVYTELLFTSKCYMRDLCVVDAEWLYEAAPDFFRKK 708
Score = 85 (35.0 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
M V EVR QL++I I+ M +VS D + IR+C+ +LF
Sbjct: 596 MMLVAEVRAQLRDICIKMSMPIVSSRGDTESIRRCLAHSLF 636
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 106 (42.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 50 VVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
V+Y+E+I TSK YM+ VTA++ WL EL P F+ + T S KR K
Sbjct: 650 VIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ-QGTHLSLKAKRAK 696
Score = 57 (25.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 7 VRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
VR QLK++L++ ++ S D D + +CI S F
Sbjct: 573 VREQLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFF 607
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 129 (50.5 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
S LF P +VVYHEL++T+KEY++ T + QWL +L P F + K K R+
Sbjct: 1211 STLFNKN--PLFVVYHELVLTNKEYIRDCTIIQPQWLIQLAPNLFIPADEKKISKIKLRE 1268
Query: 98 ALEHLHEMEDQ 108
+E LH ++
Sbjct: 1269 KIEPLHNYYEE 1279
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 129 (50.5 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
S LF P +VVYHEL++T+KEY++ T + QWL +L P F + K K R+
Sbjct: 1211 STLFNKN--PLFVVYHELVLTNKEYIRDCTIIQPQWLIQLAPNLFIPADEKKISKIKLRE 1268
Query: 98 ALEHLHEMEDQ 108
+E LH ++
Sbjct: 1269 KIEPLHNYYEE 1279
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 96 (38.9 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
Identities = 13/56 (23%), Positives = 36/56 (64%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRKALEHL 102
P +++Y+EL +T+K + + + ++G WLAE+ P ++ + T + +++ +++ +
Sbjct: 670 PQHILYNELTITTKAFARNIIPIEGSWLAEICPKYYGTRLTKQQQQQQQQNSIQSI 725
Score = 74 (31.1 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
M KV V QL + I K+ +VSCG+D+D I+K F
Sbjct: 596 MIKVLNVFEQLVKYCISLKLPIVSCGSDFDRIKKSFIGGFF 636
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 107 (42.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 21/64 (32%), Positives = 39/64 (60%)
Query: 48 DYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRKALEHLHEMED 107
++++Y+E ++TSK Y++ VT V +WL E+ P ++++ K G K +LE + E
Sbjct: 697 EWLIYNEFVLTSKNYIRTVTVVKPEWLVEIAPKYYNLDHFAK-GDVKL--SLERVVERVG 753
Query: 108 QMKQ 111
MK+
Sbjct: 754 NMKK 757
Score = 39 (18.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 9/47 (19%), Positives = 23/47 (48%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTD------WDVIRKCICSALF 41
+ + VR QL+ ++ + ++L+S W+ ++K + + F
Sbjct: 616 LTSAKNVRNQLQRLMQKYDLQLISQYNQVSEFEYWENVKKALVAGFF 662
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 88 (36.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
M EVR QL++I ++ M +VSC D + IR+C+ +LF
Sbjct: 498 MMLAAEVRAQLRDICLKMSMPMVSCRGDVESIRRCLAHSLF 538
Score = 83 (34.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 22/48 (45%), Positives = 27/48 (56%)
Query: 38 SALFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVK 85
SALF P VVY EL+ TSK YM+ + V +WL E P +F K
Sbjct: 565 SALFHC--RPACVVYTELLHTSKCYMRDLCVVAAEWLYEAAPDYFRRK 610
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 100 (40.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKE 86
P+ V+++EL+ TSK+Y++ +T +D WL+EL P F E
Sbjct: 678 PECVIFNELMQTSKKYIKNLTIIDSLWLSELAPHHFQTAE 717
Score = 64 (27.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 11/41 (26%), Positives = 23/41 (56%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
++ R++ Q++E + Q + SCG D R+C+ ++ F
Sbjct: 604 LKHARDIYRQIREHVEQIGFNVSSCGNDMLAFRRCLAASFF 644
>UNIPROTKB|Q05BE5 [details] [associations]
symbol:DHX33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33,
isoform CRA_c" species:9606 "Homo sapiens" [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 EMBL:CH471108 GO:GO:0004386 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC004148 UniGene:Hs.250456
HGNC:HGNC:16718 ChiTaRS:DHX33 EMBL:BC050409 IPI:IPI00789223
SMR:Q05BE5 Ensembl:ENST00000433302 UCSC:uc010clf.3
HOVERGEN:HBG082280 Uniprot:Q05BE5
Length = 483
Score = 89 (36.4 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVK 85
P VVY EL+ T+K YM+ + +D QWL E P +F K
Sbjct: 439 PACVVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYFRRK 477
Score = 77 (32.2 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
M V EVR QL++I ++ M + S D + +R+C+ +LF
Sbjct: 365 MTLVAEVRAQLRDICLKMSMPIASSRGDVESVRRCLAHSLF 405
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 106 (42.4 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKE 86
P V+Y+EL+ T+KEYM+ ++ +WLAEL P F K+
Sbjct: 962 PRMVIYYELVQTTKEYMRSCMPIEPKWLAELAPHFHKAKD 1001
Score = 49 (22.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 11/43 (25%), Positives = 25/43 (58%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCG--TDWDVIRKCICSALF 41
+ + R+VR QL ++ + ++ L +CG ++ I++ I + F
Sbjct: 883 LTRARDVREQLSKLCERVEVTLSTCGGISNMPPIKRAITAGFF 925
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 89 (36.4 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVK 85
P VVY EL+ T+K YM+ + +D QWL E P +F K
Sbjct: 573 PACVVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYFRRK 611
Score = 77 (32.2 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
M V EVR QL++I ++ M + S D + +R+C+ +LF
Sbjct: 499 MTLVAEVRAQLRDICLKMSMPIASSRGDVESVRRCLAHSLF 539
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 89 (36.4 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVK 85
P VVY EL+ T+K YM+ + +D QWL E P +F K
Sbjct: 663 PACVVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYFRRK 701
Score = 77 (32.2 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
M V EVR QL++I ++ M + S D + +R+C+ +LF
Sbjct: 589 MTLVAEVRAQLRDICLKMSMPIASSRGDVESVRRCLAHSLF 629
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 116 (45.9 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 22/69 (31%), Positives = 42/69 (60%)
Query: 43 MGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRKALEHL 102
+G ++V+Y+E ++TSK Y++ VT+V +WL E+ P ++ + K G K +LE +
Sbjct: 687 LGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYYDLSNFQK-GDVKL--SLERI 743
Query: 103 HEMEDQMKQ 111
E D++ +
Sbjct: 744 KEKVDRLNE 752
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 101 (40.6 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 46 TPDY--VVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKR--RKALEH 101
T DY V+YHE ++TSK+Y++ VT + +WL ++ P ++ + + + KR + +E
Sbjct: 704 TTDYEWVLYHEFVLTSKQYIRTVTGIRPEWLIDIAPNYYDL-DNFEDDQAKRALKSVVEK 762
Query: 102 LHEME 106
+ E
Sbjct: 763 MKRRE 767
Score = 56 (24.8 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 7 VRTQLKEILIQQKMKLVSCG-TD---WDVIRKCICSALF 41
VR QLK I+ +Q ++LVS TD + IR+C+ + F
Sbjct: 635 VRAQLKGIMERQDLELVSTPFTDKNYYTNIRRCLVAGFF 673
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 100 (40.3 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 42 GMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGK 89
G+ P++ +Y+E ++TS+ Y++ +T V WL EL P +F K K
Sbjct: 653 GLTRRPEFCIYNEFVLTSENYIRTITDVKFDWLLELAPSYFKQKSFPK 700
Score = 57 (25.1 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTD----WDVIRKCICSALF 41
+++ VR+QL IL + K+ LVS + ++ I+KCI + F
Sbjct: 581 IKQADSVRSQLARILTRFKLPLVSGDVNSKFYYENIKKCIAAGFF 625
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 103 (41.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 46 TPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
TP +VVY EL+ TSKE+M+ ++ ++ WL E+ P ++ +E + + K K
Sbjct: 946 TPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYYKGRELEDATNKKMPK 997
Score = 53 (23.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
M++ R+VR QL +L + +++ S TD IRK I + F
Sbjct: 874 MKRARDVRDQLVGLLERVEIETKS-STDTIKIRKAITAGYF 913
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 103 (41.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 46 TPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
TP +VVY EL+ TSKE+M+ ++ ++ WL E+ P ++ +E + + K K
Sbjct: 946 TPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYYKGRELEDATNKKMPK 997
Score = 53 (23.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
M++ R+VR QL +L + +++ S TD IRK I + F
Sbjct: 874 MKRARDVRDQLVGLLERVEIETKS-STDTIKIRKAITAGYF 913
>RGD|1307239 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10116 "Rattus norvegicus" [GO:0000182 "rDNA binding"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=ISO] [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=ISO] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 RGD:1307239 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 IPI:IPI00952339
Ensembl:ENSRNOT00000068255 UCSC:RGD:1307239 Uniprot:D3ZWE8
Length = 475
Score = 81 (33.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVK 85
P VVY L+ T+K YM+ + VD +WL E P +F K
Sbjct: 431 PACVVYTSLLYTNKCYMRDLCVVDAEWLYEAAPDYFRRK 469
Score = 79 (32.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
M V EVR QL++I ++ M ++S D + +R+C+ +LF
Sbjct: 357 MLLVAEVRAQLRDICLKMSMPIMSSRGDMESVRRCLAHSLF 397
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 81 (33.6 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVK 85
P VVY L+ T+K YM+ + VD +WL E P +F K
Sbjct: 654 PACVVYTSLLYTNKCYMRDLCVVDAEWLYEAAPDYFRRK 692
Score = 81 (33.6 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
M V EVR QL+EI ++ M ++S D + +R+C+ +LF
Sbjct: 580 MLLVAEVRAQLREICLKMSMPIMSSRGDMESVRRCMAHSLF 620
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 107 (42.7 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 40 LFGMGFTPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRRK 97
LF F V+Y+E+I TSK YM+ VTA++ WL EL P F+ + T S KR K
Sbjct: 643 LFNRKFLQK-VIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ-QGTHLSLKAKRAK 698
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 102 (41.0 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 16/50 (32%), Positives = 31/50 (62%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRR 96
P ++Y EL++T+KEY + +T + +WL E+ P +F + + T++R
Sbjct: 1003 PKVIIYFELVLTTKEYCRQITEIQPEWLLEISPHYFKPENIEELQKTQKR 1052
Score = 47 (21.6 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 3 KVREVRTQLKEILIQQKMKLVSCGTD-WDVIRKCICSALF 41
+ R+VR QL + + +++LV+ ++ D I+K I + F
Sbjct: 929 RARDVRDQLANLCERVEIELVTNSSESLDPIKKAITAGYF 968
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 102 (41.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 15/41 (36%), Positives = 31/41 (75%)
Query: 46 TPDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKE 86
+P +V+++E+ +T+KEYM+ VT+++ WL E+ P ++ K+
Sbjct: 676 SPQWVIFNEVTITTKEYMKDVTSIEPNWLFEIAPHYYKFKK 716
Score = 40 (19.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTD-------WDVIRKCICSALF 41
M++V +VR QL + + ++SC ++IRK I S F
Sbjct: 595 MQRVLQVRKQLLAYAKKYSINVISCFDSNNNREQCSNLIRKAIVSGFF 642
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 80 (33.2 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVK 85
P VVY+ L+ T+K YM+ + VD +WL + P +F K
Sbjct: 616 PSCVVYNGLLHTNKCYMRDLCVVDAEWLYDAAPDYFRRK 654
Score = 71 (30.1 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSCGTDWDVIRKCICSALF 41
M V +VR QL++I ++ M + S +D IR+C+ +LF
Sbjct: 542 MMLVSDVRAQLRDICVKLSMPMESSRSDTANIRRCLAHSLF 582
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 98 (39.6 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 15/50 (30%), Positives = 33/50 (66%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRR 96
P++ +Y+E ++T+K +++ VT V +WL ++ P ++ + + G TKR+
Sbjct: 675 PEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDL-DNFPDGDTKRK 723
Score = 42 (19.8 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSC---GTDWDV-IRKCICSALF 41
M+ VRTQL ++ + ++ VS D+ + IRK + + F
Sbjct: 598 MKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFF 642
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 98 (39.6 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 15/50 (30%), Positives = 33/50 (66%)
Query: 47 PDYVVYHELIMTSKEYMQCVTAVDGQWLAELGPMFFSVKETGKSGSTKRR 96
P++ +Y+E ++T+K +++ VT V +WL ++ P ++ + + G TKR+
Sbjct: 675 PEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDL-DNFPDGDTKRK 723
Score = 42 (19.8 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 1 MRKVREVRTQLKEILIQQKMKLVSC---GTDWDV-IRKCICSALF 41
M+ VRTQL ++ + ++ VS D+ + IRK + + F
Sbjct: 598 MKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFF 642
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 162 147 0.00091 103 3 11 22 0.44 31
30 0.50 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 89
No. of states in DFA: 593 (63 KB)
Total size of DFA: 147 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.91u 0.08s 14.99t Elapsed: 00:00:06
Total cpu time: 14.91u 0.08s 14.99t Elapsed: 00:00:06
Start: Thu Aug 15 16:07:19 2013 End: Thu Aug 15 16:07:25 2013