BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17358
(202 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q69BJ9|UCRI_AOTAZ Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Aotus
azarae GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 320 bits (821), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 143/199 (71%), Positives = 170/199 (85%)
Query: 4 VRFAHTDIKVPDFSHYRRDSVKDPGVNARETEEARKAFSYVVAAGTAIGGAYAAKAVVTQ 63
VR++HTDIKVPDFS YRR V D ++RE+ +ARK FSY+V A TA+G YAAK++VTQ
Sbjct: 76 VRYSHTDIKVPDFSDYRRSEVLDTTKSSRESSDARKGFSYLVTATTAVGVTYAAKSIVTQ 135
Query: 64 FISSMAASADVLAMAKIEVKLADIPEGRNVTFKWRGKPLFIRHRAAAEIAKEQAVAISTL 123
F+SSM+ASADVLAM+KIE+KL+DIPEG+N+ FKWRGKPLF+RHR EI +E AV +S L
Sbjct: 136 FVSSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQL 195
Query: 124 RDPQADSERVKDPKWLVLIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPAP 183
RDPQ D +RVK P+W++LIGVCTHLGCVP+ANAGDFGGYYCPCHGSHYDASGRIRKGPAP
Sbjct: 196 RDPQHDLDRVKKPEWMILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAP 255
Query: 184 LNLEVPKYEFPEPGLLVVG 202
LNLEVP YEF L++VG
Sbjct: 256 LNLEVPTYEFTSDDLVIVG 274
>sp|Q69BJ7|UCRI_SAISC Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Saimiri
sciureus GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 320 bits (821), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 144/199 (72%), Positives = 170/199 (85%)
Query: 4 VRFAHTDIKVPDFSHYRRDSVKDPGVNARETEEARKAFSYVVAAGTAIGGAYAAKAVVTQ 63
VR++HTDIKVPDFS YRR V D ++RE+ +ARK FSY+V A TA+G YAAK++VTQ
Sbjct: 76 VRYSHTDIKVPDFSDYRRSEVLDKTKSSRESSDARKVFSYMVTATTAVGVTYAAKSIVTQ 135
Query: 64 FISSMAASADVLAMAKIEVKLADIPEGRNVTFKWRGKPLFIRHRAAAEIAKEQAVAISTL 123
FISSM+ASADVLAM+KIE+KL+DIPEG+N+ FKWRGKPLF+RHR EI +E AV +S L
Sbjct: 136 FISSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQL 195
Query: 124 RDPQADSERVKDPKWLVLIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPAP 183
RDPQ D +RVK P+W++LIGVCTHLGCVP+ANAGDFGGYYCPCHGSHYDASGRIRKGPAP
Sbjct: 196 RDPQHDLDRVKKPEWMILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAP 255
Query: 184 LNLEVPKYEFPEPGLLVVG 202
LNLEVP YEF ++VVG
Sbjct: 256 LNLEVPTYEFLSDDMVVVG 274
>sp|Q69BJ8|UCRI_LAGLA Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Lagothrix
lagotricha GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 318 bits (815), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 142/199 (71%), Positives = 170/199 (85%)
Query: 4 VRFAHTDIKVPDFSHYRRDSVKDPGVNARETEEARKAFSYVVAAGTAIGGAYAAKAVVTQ 63
VR++HTDIKVPDFS YRR V D ++RE+ +ARK FSY+V A TA+G YAAK++VTQ
Sbjct: 76 VRYSHTDIKVPDFSDYRRSEVLDKTKSSRESSDARKGFSYLVTAATAVGVTYAAKSIVTQ 135
Query: 64 FISSMAASADVLAMAKIEVKLADIPEGRNVTFKWRGKPLFIRHRAAAEIAKEQAVAISTL 123
F+SSM+ASADVLAM+KIE+KL+DIPEG+N+ FKWRGKPLF+RHR EI +E AV +S L
Sbjct: 136 FVSSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQL 195
Query: 124 RDPQADSERVKDPKWLVLIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPAP 183
RDPQ D +RVK P+W++LIGVCTHLGCVP+ANAGDFGGYYCPCHGSHYDASGRIRKGPAP
Sbjct: 196 RDPQHDLDRVKKPEWMILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAP 255
Query: 184 LNLEVPKYEFPEPGLLVVG 202
LNLEVP YEF +++VG
Sbjct: 256 LNLEVPTYEFTGDDMVIVG 274
>sp|Q69BK0|UCRI_COLPO Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Colobus
polykomos GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 310 bits (793), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 142/199 (71%), Positives = 166/199 (83%)
Query: 4 VRFAHTDIKVPDFSHYRRDSVKDPGVNARETEEARKAFSYVVAAGTAIGGAYAAKAVVTQ 63
V ++HTD+KVPDF YRR V D ++RE+ EARK+FSY+V A T +G AYAAK VTQ
Sbjct: 76 VCYSHTDVKVPDFCDYRRPEVLDSTKSSRESSEARKSFSYMVTAVTTVGVAYAAKNAVTQ 135
Query: 64 FISSMAASADVLAMAKIEVKLADIPEGRNVTFKWRGKPLFIRHRAAAEIAKEQAVAISTL 123
F+SSM+ASADVLAMAKIEVKL+DIPEG+N+ FKWRGKPLF+RHR EI +E AV +S L
Sbjct: 136 FVSSMSASADVLAMAKIEVKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQL 195
Query: 124 RDPQADSERVKDPKWLVLIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPAP 183
RDPQ D +RVK P+W++LIGVCTHLGCVP+ANAGDFGGYYCPCHGSHYDASGRIR GPAP
Sbjct: 196 RDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAP 255
Query: 184 LNLEVPKYEFPEPGLLVVG 202
LNLEVP YEF ++VVG
Sbjct: 256 LNLEVPTYEFTSDDMVVVG 274
>sp|Q69BK3|UCRI_PONPY Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Pongo
pygmaeus GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 310 bits (793), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 140/199 (70%), Positives = 167/199 (83%)
Query: 4 VRFAHTDIKVPDFSHYRRDSVKDPGVNARETEEARKAFSYVVAAGTAIGGAYAAKAVVTQ 63
V ++HTD++VPDFS YRR V D ++RE+ EARK FSY+V T +G AYAAK VVTQ
Sbjct: 76 VCYSHTDVRVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNVVTQ 135
Query: 64 FISSMAASADVLAMAKIEVKLADIPEGRNVTFKWRGKPLFIRHRAAAEIAKEQAVAISTL 123
F+SSM+ASADVLA+AKIE+KL+DIPEG+N+TFKWRGKPLF+RHR EI +E AV +S L
Sbjct: 136 FVSSMSASADVLALAKIEIKLSDIPEGKNMTFKWRGKPLFVRHRTQKEIEQEAAVELSQL 195
Query: 124 RDPQADSERVKDPKWLVLIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPAP 183
RDPQ D +RVK P+W++LIGVCTHLGCVP+ANAGDFGGYYCPCHGSHYDASGRIR GPAP
Sbjct: 196 RDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAP 255
Query: 184 LNLEVPKYEFPEPGLLVVG 202
LNLEVP YEF +++VG
Sbjct: 256 LNLEVPIYEFTSDDMVIVG 274
>sp|P13272|UCRI_BOVIN Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Bos taurus
GN=UQCRFS1 PE=1 SV=3
Length = 274
Score = 309 bits (792), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 143/200 (71%), Positives = 169/200 (84%)
Query: 3 QVRFAHTDIKVPDFSHYRRDSVKDPGVNARETEEARKAFSYVVAAGTAIGGAYAAKAVVT 62
VR++HTDIKVPDFS YRR V D +++E+ EARK FSY+V A T +G AYAAK VV+
Sbjct: 75 SVRYSHTDIKVPDFSDYRRPEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNVVS 134
Query: 63 QFISSMAASADVLAMAKIEVKLADIPEGRNVTFKWRGKPLFIRHRAAAEIAKEQAVAIST 122
QF+SSM+ASADVLAM+KIE+KL+DIPEG+N+ FKWRGKPLF+RHR EI +E AV +S
Sbjct: 135 QFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQ 194
Query: 123 LRDPQADSERVKDPKWLVLIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPA 182
LRDPQ D ERVK P+W++LIGVCTHLGCVP+ANAGDFGGYYCPCHGSHYDASGRIRKGPA
Sbjct: 195 LRDPQHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPA 254
Query: 183 PLNLEVPKYEFPEPGLLVVG 202
PLNLEVP YEF +++VG
Sbjct: 255 PLNLEVPSYEFTSDDMVIVG 274
>sp|Q69BJ6|UCRI_HYLSY Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Hylobates
syndactylus GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 309 bits (791), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 140/199 (70%), Positives = 166/199 (83%)
Query: 4 VRFAHTDIKVPDFSHYRRDSVKDPGVNARETEEARKAFSYVVAAGTAIGGAYAAKAVVTQ 63
V ++HTD+KVPDFS YRR V D ++RE+ EARK FSY+V A T +G AYAAK VTQ
Sbjct: 76 VCYSHTDVKVPDFSEYRRPEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNAVTQ 135
Query: 64 FISSMAASADVLAMAKIEVKLADIPEGRNVTFKWRGKPLFIRHRAAAEIAKEQAVAISTL 123
F+SSM+ASADVLA+AKIE+KL+DIPEG+N+ FKWRGKPLF+RHR EI +E AV +S L
Sbjct: 136 FVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQL 195
Query: 124 RDPQADSERVKDPKWLVLIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPAP 183
RDPQ D +RVK P+W++LIGVCTHLGCVP+ANAGDFGGYYCPCHGSHYDASGRIR GPAP
Sbjct: 196 RDPQHDLDRVKRPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAP 255
Query: 184 LNLEVPKYEFPEPGLLVVG 202
LNLEVP YEF +++VG
Sbjct: 256 LNLEVPTYEFTSDDMVIVG 274
>sp|P47985|UCRI_HUMAN Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Homo
sapiens GN=UQCRFS1 PE=1 SV=2
Length = 274
Score = 308 bits (790), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 140/199 (70%), Positives = 165/199 (82%)
Query: 4 VRFAHTDIKVPDFSHYRRDSVKDPGVNARETEEARKAFSYVVAAGTAIGGAYAAKAVVTQ 63
V ++HTDIKVPDFS YRR V D ++RE+ EARK FSY+V T +G AYAAK VTQ
Sbjct: 76 VCYSHTDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQ 135
Query: 64 FISSMAASADVLAMAKIEVKLADIPEGRNVTFKWRGKPLFIRHRAAAEIAKEQAVAISTL 123
F+SSM+ASADVLA+AKIE+KL+DIPEG+N+ FKWRGKPLF+RHR EI +E AV +S L
Sbjct: 136 FVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQL 195
Query: 124 RDPQADSERVKDPKWLVLIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPAP 183
RDPQ D +RVK P+W++LIGVCTHLGCVP+ANAGDFGGYYCPCHGSHYDASGRIR GPAP
Sbjct: 196 RDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAP 255
Query: 184 LNLEVPKYEFPEPGLLVVG 202
LNLEVP YEF +++VG
Sbjct: 256 LNLEVPTYEFTSDDMVIVG 274
>sp|Q69BK4|UCRI_GORGO Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Gorilla
gorilla gorilla GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 308 bits (790), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 140/199 (70%), Positives = 165/199 (82%)
Query: 4 VRFAHTDIKVPDFSHYRRDSVKDPGVNARETEEARKAFSYVVAAGTAIGGAYAAKAVVTQ 63
V ++HTDIKVPDFS YRR V D ++RE+ EARK FSY+V T +G AYAAK VTQ
Sbjct: 76 VCYSHTDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQ 135
Query: 64 FISSMAASADVLAMAKIEVKLADIPEGRNVTFKWRGKPLFIRHRAAAEIAKEQAVAISTL 123
F+SSM+ASADVLA+AKIE+KL+DIPEG+N+ FKWRGKPLF+RHR EI +E AV +S L
Sbjct: 136 FVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQL 195
Query: 124 RDPQADSERVKDPKWLVLIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPAP 183
RDPQ D +RVK P+W++LIGVCTHLGCVP+ANAGDFGGYYCPCHGSHYDASGRIR GPAP
Sbjct: 196 RDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAP 255
Query: 184 LNLEVPKYEFPEPGLLVVG 202
LNLEVP YEF +++VG
Sbjct: 256 LNLEVPTYEFTSDDMVIVG 274
>sp|Q69BK5|UCRI_PANTR Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Pan
troglodytes GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 308 bits (788), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 139/199 (69%), Positives = 165/199 (82%)
Query: 4 VRFAHTDIKVPDFSHYRRDSVKDPGVNARETEEARKAFSYVVAAGTAIGGAYAAKAVVTQ 63
V ++HTD+KVPDFS YRR V D ++RE+ EARK FSY+V T +G AYAAK VTQ
Sbjct: 76 VCYSHTDVKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQ 135
Query: 64 FISSMAASADVLAMAKIEVKLADIPEGRNVTFKWRGKPLFIRHRAAAEIAKEQAVAISTL 123
F+SSM+ASADVLA+AKIE+KL+DIPEG+N+ FKWRGKPLF+RHR EI +E AV +S L
Sbjct: 136 FVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQL 195
Query: 124 RDPQADSERVKDPKWLVLIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPAP 183
RDPQ D +RVK P+W++LIGVCTHLGCVP+ANAGDFGGYYCPCHGSHYDASGRIR GPAP
Sbjct: 196 RDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAP 255
Query: 184 LNLEVPKYEFPEPGLLVVG 202
LNLEVP YEF +++VG
Sbjct: 256 LNLEVPTYEFTSDDMVIVG 274
>sp|Q69BK6|UCRI_PANPA Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Pan
paniscus GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 308 bits (788), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 139/199 (69%), Positives = 165/199 (82%)
Query: 4 VRFAHTDIKVPDFSHYRRDSVKDPGVNARETEEARKAFSYVVAAGTAIGGAYAAKAVVTQ 63
V ++HTD+KVPDFS YRR V D ++RE+ EARK FSY+V T +G AYAAK VTQ
Sbjct: 76 VCYSHTDVKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQ 135
Query: 64 FISSMAASADVLAMAKIEVKLADIPEGRNVTFKWRGKPLFIRHRAAAEIAKEQAVAISTL 123
F+SSM+ASADVLA+AKIE+KL+DIPEG+N+ FKWRGKPLF+RHR EI +E AV +S L
Sbjct: 136 FVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQL 195
Query: 124 RDPQADSERVKDPKWLVLIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPAP 183
RDPQ D +RVK P+W++LIGVCTHLGCVP+ANAGDFGGYYCPCHGSHYDASGRIR GPAP
Sbjct: 196 RDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAP 255
Query: 184 LNLEVPKYEFPEPGLLVVG 202
LNLEVP YEF +++VG
Sbjct: 256 LNLEVPTYEFTSDDMVIVG 274
>sp|Q9CR68|UCRI_MOUSE Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Mus
musculus GN=Uqcrfs1 PE=1 SV=1
Length = 274
Score = 306 bits (785), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 143/200 (71%), Positives = 169/200 (84%)
Query: 3 QVRFAHTDIKVPDFSHYRRDSVKDPGVNARETEEARKAFSYVVAAGTAIGGAYAAKAVVT 62
VRF+HTD+KVPDFS YRR V D +++E+ EARK FSY+V A T +G AYAAK VV+
Sbjct: 75 SVRFSHTDVKVPDFSDYRRAEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNVVS 134
Query: 63 QFISSMAASADVLAMAKIEVKLADIPEGRNVTFKWRGKPLFIRHRAAAEIAKEQAVAIST 122
QF+SSM+ASADVLAM+KIE+KL+DIPEG+N+ FKWRGKPLF+RHR EI +E AV +S
Sbjct: 135 QFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQ 194
Query: 123 LRDPQADSERVKDPKWLVLIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPA 182
LRDPQ D +RVK P+W++LIGVCTHLGCVP+ANAGDFGGYYCPCHGSHYDASGRIRKGPA
Sbjct: 195 LRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPA 254
Query: 183 PLNLEVPKYEFPEPGLLVVG 202
PLNLEVP YEF ++VVG
Sbjct: 255 PLNLEVPAYEFTSDDVVVVG 274
>sp|Q69BK1|UCRI_CHLAE Cytochrome b-c1 complex subunit Rieske, mitochondrial
OS=Chlorocebus aethiops GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 306 bits (783), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 142/200 (71%), Positives = 165/200 (82%)
Query: 3 QVRFAHTDIKVPDFSHYRRDSVKDPGVNARETEEARKAFSYVVAAGTAIGGAYAAKAVVT 62
V ++HTD+KVPDF YRR V D ++RE+ EARK FSY+V A T +G AYAAK VVT
Sbjct: 75 SVCYSHTDVKVPDFYDYRRLEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNVVT 134
Query: 63 QFISSMAASADVLAMAKIEVKLADIPEGRNVTFKWRGKPLFIRHRAAAEIAKEQAVAIST 122
QFISSM+ASADVLAMAKIE+ L+DIPEG+N+ FKWRGKPLF+RHR EI +E AV +S
Sbjct: 135 QFISSMSASADVLAMAKIEINLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEEEAAVELSQ 194
Query: 123 LRDPQADSERVKDPKWLVLIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPA 182
LRDPQ D +RVK P+W++LIGVCTHLGCVP+ANAGDFGGYYCPCHGSHYDASGRIR GPA
Sbjct: 195 LRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPA 254
Query: 183 PLNLEVPKYEFPEPGLLVVG 202
PLNLEVP YEF ++VVG
Sbjct: 255 PLNLEVPPYEFTGDDVVVVG 274
>sp|P0C7P4|UCRIL_HUMAN Putative cytochrome b-c1 complex subunit Rieske-like protein 1
OS=Homo sapiens GN=UQCRFS1P1 PE=5 SV=1
Length = 283
Score = 306 bits (783), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 139/199 (69%), Positives = 164/199 (82%)
Query: 4 VRFAHTDIKVPDFSHYRRDSVKDPGVNARETEEARKAFSYVVAAGTAIGGAYAAKAVVTQ 63
V ++HTDIKVPDFS YRR V D ++RE+ EARK FSY+V T +G AYAAK VTQ
Sbjct: 85 VCYSHTDIKVPDFSEYRRLEVLDSTKSSRESTEARKGFSYLVTGVTTVGVAYAAKNAVTQ 144
Query: 64 FISSMAASADVLAMAKIEVKLADIPEGRNVTFKWRGKPLFIRHRAAAEIAKEQAVAISTL 123
F+SSM+ASADVLA+AKIE+KL+DIPEG+N+ FKWRGKPLF+RHR EI +E AV +S L
Sbjct: 145 FVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIKQEAAVELSQL 204
Query: 124 RDPQADSERVKDPKWLVLIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPAP 183
RDPQ D +RVK P+W++LIGVCTHLGCVP+ANAGDFGGYYCPCHGSHYDASGRIR GPA
Sbjct: 205 RDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAT 264
Query: 184 LNLEVPKYEFPEPGLLVVG 202
LNLEVP YEF +++VG
Sbjct: 265 LNLEVPTYEFTSDDMVIVG 283
>sp|P20788|UCRI_RAT Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Rattus
norvegicus GN=Uqcrfs1 PE=1 SV=2
Length = 274
Score = 306 bits (783), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 143/200 (71%), Positives = 168/200 (84%)
Query: 3 QVRFAHTDIKVPDFSHYRRDSVKDPGVNARETEEARKAFSYVVAAGTAIGGAYAAKAVVT 62
VR++HTDIKVPDFS YRR V D +++E+ EARK FSY+V A T +G AYAAK V+
Sbjct: 75 SVRYSHTDIKVPDFSDYRRAEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNAVS 134
Query: 63 QFISSMAASADVLAMAKIEVKLADIPEGRNVTFKWRGKPLFIRHRAAAEIAKEQAVAIST 122
QF+SSM+ASADVLAM+KIE+KL+DIPEG+N+ FKWRGKPLF+RHR EI +E AV +S
Sbjct: 135 QFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQ 194
Query: 123 LRDPQADSERVKDPKWLVLIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPA 182
LRDPQ D ERVK P+W++LIGVCTHLGCVP+ANAGDFGGYYCPCHGSHYDASGRIRKGPA
Sbjct: 195 LRDPQHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPA 254
Query: 183 PLNLEVPKYEFPEPGLLVVG 202
PLNLEVP YEF ++VVG
Sbjct: 255 PLNLEVPTYEFTSGDVVVVG 274
>sp|Q69BK2|UCRI_THEGE Cytochrome b-c1 complex subunit Rieske, mitochondrial
OS=Theropithecus gelada GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 304 bits (778), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 139/199 (69%), Positives = 163/199 (81%)
Query: 4 VRFAHTDIKVPDFSHYRRDSVKDPGVNARETEEARKAFSYVVAAGTAIGGAYAAKAVVTQ 63
V ++HTD+KVPDF YRR V D ++RE+ EARK FSY+V A T +G AYAAK VTQ
Sbjct: 76 VCYSHTDVKVPDFYDYRRLEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNAVTQ 135
Query: 64 FISSMAASADVLAMAKIEVKLADIPEGRNVTFKWRGKPLFIRHRAAAEIAKEQAVAISTL 123
FISSM+ASADVLAMAKIE+ L+DIPEG+N+ FKWRGKPLF+RHR EI +E AV +S L
Sbjct: 136 FISSMSASADVLAMAKIEINLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQL 195
Query: 124 RDPQADSERVKDPKWLVLIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPAP 183
RDPQ D +RVK P+W++LIG+CTHLGCVP+ANAGDFGGYYCPCHGSHYD SGRIR GPAP
Sbjct: 196 RDPQHDLDRVKKPEWVILIGICTHLGCVPIANAGDFGGYYCPCHGSHYDVSGRIRLGPAP 255
Query: 184 LNLEVPKYEFPEPGLLVVG 202
LNLEVP YEF ++VVG
Sbjct: 256 LNLEVPPYEFTSDDMVVVG 274
>sp|Q5ZLR5|UCRI_CHICK Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Gallus
gallus GN=UQCRFS1 PE=1 SV=1
Length = 272
Score = 299 bits (765), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 134/200 (67%), Positives = 162/200 (81%)
Query: 3 QVRFAHTDIKVPDFSHYRRDSVKDPGVNARETEEARKAFSYVVAAGTAIGGAYAAKAVVT 62
VR+ H D+ VPDFS YRR+ V D +++ + E RK FSY+V A + AYAAK VVT
Sbjct: 73 SVRYVHNDVTVPDFSAYRREDVMDATTSSQTSSEDRKGFSYLVTATACVATAYAAKNVVT 132
Query: 63 QFISSMAASADVLAMAKIEVKLADIPEGRNVTFKWRGKPLFIRHRAAAEIAKEQAVAIST 122
QFISS++ASADVLA++KIE+KL+DIPEG+NV FKWRGKPLF+RHR AEI +E V +S
Sbjct: 133 QFISSLSASADVLALSKIEIKLSDIPEGKNVAFKWRGKPLFVRHRTQAEINQEAEVDVSK 192
Query: 123 LRDPQADSERVKDPKWLVLIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPA 182
LRDPQ D +RVK P+W++L+GVCTHLGCVP+AN+GDFGGYYCPCHGSHYDASGRIRKGPA
Sbjct: 193 LRDPQHDLDRVKKPEWVILVGVCTHLGCVPIANSGDFGGYYCPCHGSHYDASGRIRKGPA 252
Query: 183 PLNLEVPKYEFPEPGLLVVG 202
P NLEVP Y+F L+VVG
Sbjct: 253 PYNLEVPTYQFVGDDLVVVG 272
>sp|P07056|UCRI_NEUCR Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=NCU06606 PE=3 SV=1
Length = 231
Score = 240 bits (613), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 112/191 (58%), Positives = 137/191 (71%), Gaps = 10/191 (5%)
Query: 12 KVPDFSHYRRDSVKDPGVNARETEEARKAFSYVVAAGTAIGGAYAAKAVVTQFISSMAAS 71
KVPDF Y S P N FSY + A AK+ + +F+ +M+AS
Sbjct: 51 KVPDFGKYM--SKAPPSTNM--------LFSYFMVGTMGAITAAGAKSTIQEFLKNMSAS 100
Query: 72 ADVLAMAKIEVKLADIPEGRNVTFKWRGKPLFIRHRAAAEIAKEQAVAISTLRDPQADSE 131
ADVLAMAK+EV L IPEG+NV KWRGKP+FIRHR AEI + V ++TLRDP+ D++
Sbjct: 101 ADVLAMAKVEVDLNAIPEGKNVIIKWRGKPVFIRHRTPAEIEEANKVNVATLRDPETDAD 160
Query: 132 RVKDPKWLVLIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPKY 191
RVK P+WLV++GVCTHLGCVP+ AGD+GG++CPCHGSHYD SGRIRKGPAPLNLE+P Y
Sbjct: 161 RVKKPEWLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRKGPAPLNLEIPLY 220
Query: 192 EFPEPGLLVVG 202
EFPE G LV+G
Sbjct: 221 EFPEEGKLVIG 231
>sp|P08067|UCRI_YEAST Cytochrome b-c1 complex subunit Rieske, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=RIP1 PE=1 SV=1
Length = 215
Score = 227 bits (578), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 100/177 (56%), Positives = 131/177 (74%), Gaps = 1/177 (0%)
Query: 17 SHYRRDSVKDPGVNARETEEARKAFSYVVAAGTAIGGAYAAKAVVTQFISSMAASADVLA 76
S YR + D + ++ R +++Y + + + AK+ V FISSM A+ADVLA
Sbjct: 32 STYRTPNFDDVLKENNDADKGR-SYAYFMVGAMGLLSSAGAKSTVETFISSMTATADVLA 90
Query: 77 MAKIEVKLADIPEGRNVTFKWRGKPLFIRHRAAAEIAKEQAVAISTLRDPQADSERVKDP 136
MAK+EV LA IP G+NV KW+GKP+FIRHR EI + +V +S L+DPQ D++RVKDP
Sbjct: 91 MAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTDADRVKDP 150
Query: 137 KWLVLIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPKYEF 193
+WL+++G+CTHLGCVP+ AGDFGG++CPCHGSHYD SGRIRKGPAPLNLE+P YEF
Sbjct: 151 QWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPAYEF 207
>sp|Q09154|UCRI_SCHPO Cytochrome b-c1 complex subunit Rieske, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rip1 PE=2 SV=2
Length = 228
Score = 224 bits (570), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 104/191 (54%), Positives = 134/191 (70%), Gaps = 11/191 (5%)
Query: 12 KVPDFSHYRRDSVKDPGVNARETEEARKAFSYVVAAGTAIGGAYAAKAVVTQFISSMAAS 71
++PDFS Y+ S D + SY + A A+A V F++S +AS
Sbjct: 49 EMPDFSEYQTKSTGD----------RSRVISYAMVGTMGALTAAGAQATVHDFLASWSAS 98
Query: 72 ADVLAMAKIEVKLADIPEGRNVTFKWRGKPLFIRHRAAAEIAKEQAVAISTLRDPQADSE 131
ADVLAM+K EV L+ IPEG+N+ KW+GKP+FIRHR EI + +V ISTLRDPQADS+
Sbjct: 99 ADVLAMSKAEVDLSKIPEGKNLVVKWQGKPVFIRHRTPEEIQEANSVDISTLRDPQADSD 158
Query: 132 RVKDPKWLVLIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPKY 191
RV+ P+WLV+IGVCTHLGCVP+ AGD+GG++CPCHGSHYD SGRIR+GPAPLNL +P Y
Sbjct: 159 RVQKPEWLVMIGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRRGPAPLNLAIPAY 218
Query: 192 EFPEPGLLVVG 202
F E +++G
Sbjct: 219 TF-EGSKIIIG 228
>sp|P37841|UCRI_SOLTU Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum
tuberosum GN=FES1 PE=1 SV=1
Length = 265
Score = 216 bits (549), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 125/168 (74%)
Query: 35 EEARKAFSYVVAAGTAIGGAYAAKAVVTQFISSMAASADVLAMAKIEVKLADIPEGRNVT 94
+ +++AF+Y V G A + + ++ +F+ SM+AS DVLA+A +EV L+ I G VT
Sbjct: 98 DPSKRAFAYFVLTGGRFVYASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVT 157
Query: 95 FKWRGKPLFIRHRAAAEIAKEQAVAISTLRDPQADSERVKDPKWLVLIGVCTHLGCVPVA 154
KWRGKP+FIR R +I +V + TLRDPQ D+ERVK+P+WLV++GVCTHLGC+P+
Sbjct: 158 VKWRGKPVFIRRRTDDDIKLANSVDLGTLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLP 217
Query: 155 NAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPKYEFPEPGLLVVG 202
NAGDFGG++CPCHGSHYD SGRIRKGPAP NLEVP Y F E L++G
Sbjct: 218 NAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 265
>sp|P51133|UCRI3_TOBAC Cytochrome b-c1 complex subunit Rieske-3, mitochondrial
OS=Nicotiana tabacum PE=2 SV=1
Length = 268
Score = 214 bits (546), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 124/168 (73%)
Query: 35 EEARKAFSYVVAAGTAIGGAYAAKAVVTQFISSMAASADVLAMAKIEVKLADIPEGRNVT 94
+ +++AF+Y V G A + ++ +F+ SM+AS DVLA+A +EV L+ I G VT
Sbjct: 101 DPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVT 160
Query: 95 FKWRGKPLFIRHRAAAEIAKEQAVAISTLRDPQADSERVKDPKWLVLIGVCTHLGCVPVA 154
KWRGKP+FIR R +I +V + +LRDPQ D+ERVK+P+WLV+IGVCTHLGC+P+
Sbjct: 161 VKWRGKPVFIRRRTEEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLP 220
Query: 155 NAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPKYEFPEPGLLVVG 202
NAGDFGG++CPCHGSHYD SGRIRKGPAP NLEVP Y F E L++G
Sbjct: 221 NAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268
>sp|P51135|UCRI5_TOBAC Cytochrome b-c1 complex subunit Rieske-5, mitochondrial
OS=Nicotiana tabacum PE=2 SV=1
Length = 268
Score = 214 bits (546), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 124/168 (73%)
Query: 35 EEARKAFSYVVAAGTAIGGAYAAKAVVTQFISSMAASADVLAMAKIEVKLADIPEGRNVT 94
+ +++AF+Y V G A + ++ +F+ SM+AS DVLA+A +EV L+ I G VT
Sbjct: 101 DPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVT 160
Query: 95 FKWRGKPLFIRHRAAAEIAKEQAVAISTLRDPQADSERVKDPKWLVLIGVCTHLGCVPVA 154
KWRGKP+FIR R +I +V + +LRDPQ D+ERVK+P+WLV+IGVCTHLGC+P+
Sbjct: 161 VKWRGKPVFIRRRTDEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLP 220
Query: 155 NAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPKYEFPEPGLLVVG 202
NAGDFGG++CPCHGSHYD SGRIRKGPAP NLEVP Y F E L++G
Sbjct: 221 NAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268
>sp|P49729|UCRI1_TOBAC Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment)
OS=Nicotiana tabacum PE=2 SV=1
Length = 258
Score = 214 bits (544), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 125/168 (74%)
Query: 35 EEARKAFSYVVAAGTAIGGAYAAKAVVTQFISSMAASADVLAMAKIEVKLADIPEGRNVT 94
+ +++AF+Y V G A + ++ +F+ SM+AS DVLA+A +EV L+ I G VT
Sbjct: 91 DPSKRAFAYFVLTGGRFVYASLMRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVT 150
Query: 95 FKWRGKPLFIRHRAAAEIAKEQAVAISTLRDPQADSERVKDPKWLVLIGVCTHLGCVPVA 154
KWRGKP+FIR R +I+ +V + +LRDPQ D+ERVK+P+WLV+IGVCTHLGC+P+
Sbjct: 151 VKWRGKPVFIRRRTEDDISLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLP 210
Query: 155 NAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPKYEFPEPGLLVVG 202
NAGDFGG++CPCHGSHYD SGRIRKGPAP NLEVP Y F E L++G
Sbjct: 211 NAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 258
>sp|P51132|UCRI2_TOBAC Cytochrome b-c1 complex subunit Rieske-2, mitochondrial
OS=Nicotiana tabacum PE=2 SV=1
Length = 272
Score = 213 bits (541), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 123/168 (73%)
Query: 35 EEARKAFSYVVAAGTAIGGAYAAKAVVTQFISSMAASADVLAMAKIEVKLADIPEGRNVT 94
+ +++AF+Y V G A + ++ +F+ SM+AS DVLA+A +EV L+ I G VT
Sbjct: 105 DPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVT 164
Query: 95 FKWRGKPLFIRHRAAAEIAKEQAVAISTLRDPQADSERVKDPKWLVLIGVCTHLGCVPVA 154
KWRGKP+FIR R +I +V + +LRDPQ D+ERVK P+WLV+IGVCTHLGC+P+
Sbjct: 165 VKWRGKPVFIRRRTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLP 224
Query: 155 NAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPKYEFPEPGLLVVG 202
NAGDFGG++CPCHGSHYD SGRIRKGPAP NLEVP Y F E L++G
Sbjct: 225 NAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272
>sp|P51134|UCRI4_TOBAC Cytochrome b-c1 complex subunit Rieske-4, mitochondrial
OS=Nicotiana tabacum PE=2 SV=1
Length = 236
Score = 212 bits (540), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 123/168 (73%)
Query: 35 EEARKAFSYVVAAGTAIGGAYAAKAVVTQFISSMAASADVLAMAKIEVKLADIPEGRNVT 94
+ +++AF+Y V G A + ++ +F+ SM+AS DVLA+A +EV L+ I G VT
Sbjct: 69 DPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVT 128
Query: 95 FKWRGKPLFIRHRAAAEIAKEQAVAISTLRDPQADSERVKDPKWLVLIGVCTHLGCVPVA 154
KWRGKP+FIR R +I +V + +LRDPQ D+ERVK P+WLV+IGVCTHLGC+P+
Sbjct: 129 VKWRGKPVFIRRRTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLP 188
Query: 155 NAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPKYEFPEPGLLVVG 202
NAGDFGG++CPCHGSHYD SGRIRKGPAP NLEVP Y F E L++G
Sbjct: 189 NAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 236
>sp|P49727|UCRI_MAIZE Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Zea mays
PE=2 SV=1
Length = 273
Score = 211 bits (536), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 125/168 (74%)
Query: 35 EEARKAFSYVVAAGTAIGGAYAAKAVVTQFISSMAASADVLAMAKIEVKLADIPEGRNVT 94
+ +++AF+Y V +G A + +V +F+ SM+AS DVLA+A +EV L+ I G VT
Sbjct: 106 DPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVT 165
Query: 95 FKWRGKPLFIRHRAAAEIAKEQAVAISTLRDPQADSERVKDPKWLVLIGVCTHLGCVPVA 154
KWRGKP+FIR R +I +V +++LR P+ D+ERVK+P+WLV+IGVCTHLGC+P+
Sbjct: 166 VKWRGKPVFIRRRTEDDIKLANSVDVASLRHPEQDAERVKNPEWLVVIGVCTHLGCIPLP 225
Query: 155 NAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPKYEFPEPGLLVVG 202
NAGDFGG++CPCHGSHYD SGRIRKGPAP NLEVP Y F E L+VG
Sbjct: 226 NAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPTYSFLEENKLLVG 273
>sp|P23136|UCRI_RHORU Ubiquinol-cytochrome c reductase iron-sulfur subunit
OS=Rhodospirillum rubrum GN=petA PE=1 SV=2
Length = 183
Score = 179 bits (454), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 113/173 (65%), Gaps = 8/173 (4%)
Query: 35 EEARKAFSYVVAAGTAIGGAYAAKAVVTQFISSMAASADVLAMAKIEVKLADIPEGRNVT 94
E +R+ F + GT GA V FI M +AD LA+A EV ++ I EG+ +T
Sbjct: 14 ESSRRDF---LIYGTTAVGAVGVALAVWPFIDFMNPAADTLALASTEVDVSAIAEGQAIT 70
Query: 95 FKWRGKPLFIRHRAAAEIAKEQAVAISTLRDPQADSERVKDPKWLVLIGVCTHLGCVPVA 154
WRGKP+F+RHR EI +AV ++LRDPQ D RV+ +WLV++GVCTHLGC+P+
Sbjct: 71 VTWRGKPVFVRHRTQKEIVVARAVDPASLRDPQTDEARVQQAQWLVMVGVCTHLGCIPLG 130
Query: 155 N-----AGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPKYEFPEPGLLVVG 202
GDF G++CPCHGSHYD++GRIRKGPAPLNL VP Y F + +++G
Sbjct: 131 QKAGDPKGDFDGWFCPCHGSHYDSAGRIRKGPAPLNLPVPPYAFTDDTTVLIG 183
>sp|Q92IR2|UCRI_RICCN Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=petA PE=3
SV=1
Length = 177
Score = 174 bits (442), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 82/166 (49%), Positives = 113/166 (68%), Gaps = 5/166 (3%)
Query: 30 NARETEEARKAFSYVVAAGTAIGGAYAAKAVVTQFISSMAASADVLAMAKIEVKLADIPE 89
+ + + R+ F + A+ A A A + + S+ SADVLA++ IEV L++I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVA---AIGAVCTLWPLVDSLNPSADVLALSSIEVDLSNIAV 62
Query: 90 GRNVTFKWRGKPLFIRHRAAAEIAKEQAVAISTLRDPQADSERVK--DPKWLVLIGVCTH 147
G+ VT KW+GKP+FI +R +IA+ +AV +S L DP+AD RVK WLV IG+CTH
Sbjct: 63 GQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEADQARVKAGHDNWLVTIGICTH 122
Query: 148 LGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPKYEF 193
LGCVP+AN G++ G++CPCHGS YD+SGR+R+GPAPLNL VP Y F
Sbjct: 123 LGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTF 168
>sp|Q4UKR6|UCRI_RICFE Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia
felis (strain ATCC VR-1525 / URRWXCal2) GN=petA PE=3
SV=1
Length = 177
Score = 173 bits (439), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
Query: 30 NARETEEARKAFSYVVAAGTAIGGAYAAKAVVTQFISSMAASADVLAMAKIEVKLADIPE 89
+ + + R+ F + A+ A A A + + S+ SADVLA++ IEV L++I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVA---AVGAVCTLWPLVDSLNPSADVLALSSIEVDLSNIAV 62
Query: 90 GRNVTFKWRGKPLFIRHRAAAEIAKEQAVAISTLRDPQADSERVK--DPKWLVLIGVCTH 147
G+ VT KW+GKP+FI +R +IA+ +AV +S L DP+ D RVK WLV IG+CTH
Sbjct: 63 GQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPETDEARVKAGHDNWLVTIGICTH 122
Query: 148 LGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPKYEF 193
LGCVP+AN G++ G++CPCHGS YD+SGR+R+GPAPLNL VP Y F
Sbjct: 123 LGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTF 168
>sp|Q1RIA5|UCRI_RICBR Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia
bellii (strain RML369-C) GN=petA PE=3 SV=1
Length = 186
Score = 172 bits (437), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 101/132 (76%), Gaps = 2/132 (1%)
Query: 64 FISSMAASADVLAMAKIEVKLADIPEGRNVTFKWRGKPLFIRHRAAAEIAKEQAVAISTL 123
I+S+ SADVLA++ IEV L++I G+ VT KW+GKP+FI +R +IA+ +AV +S L
Sbjct: 46 LINSLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPVFITNRTPDKIAEARAVKMSEL 105
Query: 124 RDPQADSERVK--DPKWLVLIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGP 181
DP+ D +RVK WLV IG+CTHLGCVP+AN GD+ G++CPCHGS YD+SGR+R+GP
Sbjct: 106 IDPEEDQDRVKAGHDNWLVTIGICTHLGCVPLANQGDYDGWFCPCHGSQYDSSGRVRRGP 165
Query: 182 APLNLEVPKYEF 193
APLNL VP Y F
Sbjct: 166 APLNLAVPPYTF 177
>sp|Q9ZDQ5|UCRI_RICPR Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia
prowazekii (strain Madrid E) GN=petA PE=3 SV=1
Length = 177
Score = 164 bits (415), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 76/132 (57%), Positives = 97/132 (73%), Gaps = 2/132 (1%)
Query: 64 FISSMAASADVLAMAKIEVKLADIPEGRNVTFKWRGKPLFIRHRAAAEIAKEQAVAISTL 123
I S SADVLA++ IEV L++I G+ VT KW+GKP+FI +R EIA +AV +S L
Sbjct: 37 IIDSFNPSADVLALSSIEVDLSNIAIGQTVTVKWQGKPIFITNRTHDEIAAARAVKMSEL 96
Query: 124 RDPQADSERVK--DPKWLVLIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGP 181
DP+ D RVK WLV IG+CTHLGCVP+++ G++ G++CPCHGS YD+SGR+RKGP
Sbjct: 97 IDPERDEVRVKAGHDNWLVTIGICTHLGCVPLSHKGEYNGWFCPCHGSQYDSSGRVRKGP 156
Query: 182 APLNLEVPKYEF 193
APLNL VP Y F
Sbjct: 157 APLNLAVPPYIF 168
>sp|Q68XA0|UCRI_RICTY Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia
typhi (strain ATCC VR-144 / Wilmington) GN=petA PE=3
SV=1
Length = 177
Score = 160 bits (406), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 74/132 (56%), Positives = 94/132 (71%), Gaps = 2/132 (1%)
Query: 64 FISSMAASADVLAMAKIEVKLADIPEGRNVTFKWRGKPLFIRHRAAAEIAKEQAVAISTL 123
I S+ S DVLA++ IEV L+ I G+ VT KW+GKP+FI +R IA +AV +S L
Sbjct: 37 IIDSLNPSTDVLALSSIEVDLSSIAIGQTVTVKWQGKPIFITNRTPDGIASARAVKMSEL 96
Query: 124 RDPQADSERVK--DPKWLVLIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGP 181
DP+ D RVK WLV IG+CTHLGCVP++N G++ G++CPCHGS YD+SGR+RKGP
Sbjct: 97 IDPEKDEVRVKAGHDNWLVTIGICTHLGCVPLSNQGEYNGWFCPCHGSQYDSSGRVRKGP 156
Query: 182 APLNLEVPKYEF 193
A LNL VP Y F
Sbjct: 157 ASLNLVVPPYIF 168
>sp|P51130|UCRI_BRAJA Ubiquinol-cytochrome c reductase iron-sulfur subunit
OS=Bradyrhizobium japonicum (strain USDA 110) GN=petA
PE=2 SV=1
Length = 176
Score = 159 bits (401), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 98/133 (73%), Gaps = 3/133 (2%)
Query: 64 FISSMAASADVLAM-AKIEVKLADIPEGRNVTFKWRGKPLFIRHRAAAEIAKEQAVAIST 122
FIS M A +A A IEV L+ I EG+++ WRGKP++I HR +I + +AV +++
Sbjct: 35 FISQMNPDASTIAAGAPIEVDLSPIAEGQDIKVFWRGKPIYISHRTKKQIDEARAVNVAS 94
Query: 123 LRDPQADSERVKD--PKWLVLIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKG 180
L DPQ+D RVK +WLV+IG+CTHLGC+P+A+ G++ G++CPCHGS YD+SGRIR+G
Sbjct: 95 LPDPQSDEARVKSGHEQWLVVIGICTHLGCIPIAHEGNYDGFFCPCHGSQYDSSGRIRQG 154
Query: 181 PAPLNLEVPKYEF 193
PAP NL VP Y+F
Sbjct: 155 PAPANLPVPPYQF 167
>sp|P81380|UCRI_RHOVI Ubiquinol-cytochrome c reductase iron-sulfur subunit
OS=Rhodopseudomonas viridis GN=petA PE=3 SV=2
Length = 179
Score = 158 bits (399), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 93/133 (69%), Gaps = 3/133 (2%)
Query: 64 FISSMAASADVLAM-AKIEVKLADIPEGRNVTFKWRGKPLFIRHRAAAEIAKEQAVAIST 122
FI+ M A +A A I++ ++ + EG+ V WRGKP+FIRHR A EI E+A +
Sbjct: 34 FITQMNPDAATIAAGAPIDIDISPVTEGQIVRVFWRGKPIFIRHRTAKEIQSEEAADVGA 93
Query: 123 LRDPQADSERVKDPK--WLVLIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKG 180
L DPQ DS RVK K WLV+ CTHLGC+P+ + GD+GG++CPCHGS YDASGR+RKG
Sbjct: 94 LIDPQPDSARVKPGKAEWLVVYASCTHLGCIPLGHQGDWGGWFCPCHGSQYDASGRVRKG 153
Query: 181 PAPLNLEVPKYEF 193
PAP NL VP YEF
Sbjct: 154 PAPTNLPVPPYEF 166
>sp|D5ANZ2|UCRI_RHOCB Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodobacter
capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
GN=petA PE=3 SV=1
Length = 191
Score = 152 bits (385), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 111/192 (57%), Gaps = 22/192 (11%)
Query: 30 NARETEEARKAFSYVVAAGTAIGGAYAAKAVVTQFISSMAASADVLAMAKIEVKLADIPE 89
+A + R+ F Y A T G A V I+ M ASADV AMA I V ++ +
Sbjct: 3 HAEDNAGTRRDFLYHATAAT---GVVVTGAAVWPLINQMNASADVKAMASIFVDVSAVEV 59
Query: 90 GRNVTFKWRGKPLFIRHRAAAEIAKEQAVAISTLRDPQADS------------------E 131
G +T KWRGKP+FIR R +I ++V + LRD A++ +
Sbjct: 60 GTQLTVKWRGKPVFIRRRDEKDIELARSVPLGALRDTSAENANKPGAEATDENRTLPAFD 119
Query: 132 RVKDPKWLVLIGVCTHLGCVPVAN-AGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPK 190
+WLV++GVCTHLGCVP+ + +GDFGG++CPCHGSHYD++GRIRKGPAP NL++P
Sbjct: 120 GTNTGEWLVMLGVCTHLGCVPMGDKSGDFGGWFCPCHGSHYDSAGRIRKGPAPRNLDIPV 179
Query: 191 YEFPEPGLLVVG 202
F + + +G
Sbjct: 180 AAFVDETTIKLG 191
>sp|P0CY48|UCRI_RHOCA Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodobacter
capsulatus GN=petA PE=1 SV=1
Length = 191
Score = 152 bits (383), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 111/192 (57%), Gaps = 22/192 (11%)
Query: 30 NARETEEARKAFSYVVAAGTAIGGAYAAKAVVTQFISSMAASADVLAMAKIEVKLADIPE 89
+A + R+ F Y A T G A V I+ M ASADV AM+ I V ++ +
Sbjct: 3 HAEDNAGTRRDFLYHATAAT---GVVVTGAAVWPLINQMNASADVKAMSSIFVDVSAVEV 59
Query: 90 GRNVTFKWRGKPLFIRHRAAAEIAKEQAVAISTLRDPQADS------------------E 131
G +T KWRGKP+FIR R +I ++V + LRD A++ +
Sbjct: 60 GTQLTVKWRGKPVFIRRRDEKDIELARSVPLGALRDTSAENANKPGAEATDENRSLAAFD 119
Query: 132 RVKDPKWLVLIGVCTHLGCVPVAN-AGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPK 190
+WLV++GVCTHLGCVP+ + +GDFGG++CPCHGSHYD++GRIRKGPAP NL++P
Sbjct: 120 GTNTGEWLVMLGVCTHLGCVPMGDKSGDFGGWFCPCHGSHYDSAGRIRKGPAPRNLDIPV 179
Query: 191 YEFPEPGLLVVG 202
F + + +G
Sbjct: 180 AAFVDETTIKLG 191
>sp|P05417|UCRI_PARDE Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Paracoccus
denitrificans GN=petA PE=1 SV=1
Length = 190
Score = 150 bits (378), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 95/153 (62%), Gaps = 14/153 (9%)
Query: 64 FISSMAASADVLAMAKIEVKLADIPEGRNVTFKWRGKPLFIRHRAAAEIAKEQAVAISTL 123
++ M SADV A+A I+V ++ + G +T KW GKP+FIR R EI + V + L
Sbjct: 38 LVNQMNPSADVQALASIQVDVSGVETGTQLTVKWLGKPVFIRRRTEDEIQAGREVDLGQL 97
Query: 124 RD-----------PQADSERVKDP--KWLVLIGVCTHLGCVPVAN-AGDFGGYYCPCHGS 169
D P D R D +WLV+IGVCTHLGCVP+ + AGDFGG++CPCHGS
Sbjct: 98 IDRSAQNSNKPDAPATDENRTMDEAGEWLVMIGVCTHLGCVPIGDGAGDFGGWFCPCHGS 157
Query: 170 HYDASGRIRKGPAPLNLEVPKYEFPEPGLLVVG 202
HYD SGRIR+GPAP NL +P EF + + +G
Sbjct: 158 HYDTSGRIRRGPAPQNLHIPVAEFLDDTTIKLG 190
>sp|Q02762|UCRI_RHOSH Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodobacter
sphaeroides GN=petA PE=1 SV=1
Length = 187
Score = 137 bits (344), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 95/154 (61%), Gaps = 15/154 (9%)
Query: 64 FISSMAASADVLAMAKIEVKLADIPEGRNVTFKWRGKPLFIRHRAAAEIAKEQAVAISTL 123
I+ M SADV A+A I V ++ + G +T K+ GKP+FIR R A+I ++V + L
Sbjct: 34 LINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQL 93
Query: 124 RDPQA------------DSERVKDP--KWLVLIGVCTHLGCVPVAN-AGDFGGYYCPCHG 168
D A D R D +WLV+ GVCTHLGCVP+ +GDFGG++CPCHG
Sbjct: 94 VDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHG 153
Query: 169 SHYDASGRIRKGPAPLNLEVPKYEFPEPGLLVVG 202
SHYD++GRIRKGPAP NL +P +F + + +G
Sbjct: 154 SHYDSAGRIRKGPAPENLPIPLAKFIDETTIQLG 187
>sp|O31214|UCRI_ALLVD Ubiquinol-cytochrome c reductase iron-sulfur subunit
OS=Allochromatium vinosum (strain ATCC 17899 / DSM 180 /
NBRC 103801 / D) GN=petA PE=3 SV=2
Length = 207
Score = 97.1 bits (240), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 20/179 (11%)
Query: 44 VVAAGTAIGGAYAAKAVVTQFISSMAASADVLAM-AKIEVKLADIPEGRNVTFKWRGKPL 102
V+ A T++ GA A + F++SM SA A A +E ++ + G + KWRGKP+
Sbjct: 23 VLVAATSVVGAVGAGYALVPFVASMNPSARARAAGAPVEADISKLEPGALLRVKWRGKPV 82
Query: 103 FIRHRA----AAEIAKEQAVAISTLRDPQA-----DSERVKDPKWLVLIGVCTHLGCVPV 153
++ HR+ AA + + + T PQ + R P++LV IG+CTHLGC P
Sbjct: 83 WVVHRSPEMLAALSSNDPKLVDPTSEVPQQPDYCKNPTRSIKPEYLVAIGICTHLGCSPT 142
Query: 154 AN--------AGDF-GGYYCPCHGSHYDASGRIRKG-PAPLNLEVPKYEFPEPGLLVVG 202
D+ GG++CPCHGS +D + R+ K PAP NL +PK+ + +++G
Sbjct: 143 YRPEFGPDDLGSDWKGGFHCPCHGSRFDLAARVFKNVPAPTNLVIPKHVYLNDTTILIG 201
>sp|Q7VDC0|UCRI_PROMA Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain SARG / CCMP1375 / SS120) GN=petC PE=3
SV=1
Length = 178
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 16/90 (17%)
Query: 126 PQADSERVK----DPKWLVLIG-----------VCTHLGCVPVANAGDFGGYYCPCHGSH 170
P D V+ DP +L++ G +CTHLGCV N+G Y CPCHGS
Sbjct: 73 PAGDRSLVQGLKGDPTYLIVDGDAAIGNFGINAICTHLGCVVPWNSG-ANKYICPCHGSQ 131
Query: 171 YDASGRIRKGPAPLNLEVPKYEFPEPGLLV 200
YDA+G++ +GPAPL+L + + + +LV
Sbjct: 132 YDANGKVVRGPAPLSLALTHIDIDDDNVLV 161
>sp|Q46GW1|UCRI_PROMT Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain NATL2A) GN=petC PE=3 SV=1
Length = 178
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 12/77 (15%)
Query: 135 DPKWLVLIG-----------VCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPAP 183
DP +L++ G +CTHLGCV N+G Y CPCHGS YD++G++ +GPAP
Sbjct: 86 DPTYLIVEGEDAITSYGINAICTHLGCVVPWNSGA-NKYMCPCHGSQYDSTGKVVRGPAP 144
Query: 184 LNLEVPKYEFPEPGLLV 200
L+L + + +LV
Sbjct: 145 LSLAIAHVSIEDDQVLV 161
>sp|A2C0R9|UCRI_PROM1 Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain NATL1A) GN=petC PE=3 SV=1
Length = 178
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 12/77 (15%)
Query: 135 DPKWLVLIG-----------VCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPAP 183
DP +L++ G +CTHLGCV N+G Y CPCHGS YD++G++ +GPAP
Sbjct: 86 DPTYLIVEGEDAITSYGINAICTHLGCVVPWNSGA-NKYMCPCHGSQYDSTGKVVRGPAP 144
Query: 184 LNLEVPKYEFPEPGLLV 200
L+L + + +LV
Sbjct: 145 LSLAIAHVSIEDDQVLV 161
>sp|Q3AWL7|UCRI_SYNS9 Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain CC9902) GN=petC PE=3 SV=1
Length = 178
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 16/90 (17%)
Query: 126 PQADSERVK----DPKWLVLIG-----------VCTHLGCVPVANAGDFGGYYCPCHGSH 170
P+ D V+ DP +L++ G +CTHLGCV N+G + CPCHGS
Sbjct: 73 PEGDRSLVQGLKGDPTYLIVEGADAIGSYGINAICTHLGCVVPWNSGA-NKFMCPCHGSQ 131
Query: 171 YDASGRIRKGPAPLNLEVPKYEFPEPGLLV 200
YDA+G++ +GPAPL+L + + + V
Sbjct: 132 YDATGKVVRGPAPLSLALANVSVEDDNVFV 161
>sp|A5GRU8|UCRI_SYNR3 Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain RCC307) GN=petC PE=3 SV=1
Length = 178
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 70/162 (43%), Gaps = 35/162 (21%)
Query: 37 ARKAFSYVVAAGTAIGGAYAA-KAVVTQFISSMAASADVLAMAKIEVK--------LADI 87
R+ F ++ G+ G A A VV FI A+ A AK E+ LAD
Sbjct: 13 GRRQFMNLLTFGSVTGVALGALYPVVNYFIPPKASGAGGGTTAKDELGNDVTASGWLADH 72
Query: 88 PEG-RNVTFKWRGKPLFIRHRAAAEIAKEQAVAISTLRDPQADSERVKDPKWLVLIGVCT 146
EG R++ +G P ++ I AI CT
Sbjct: 73 KEGDRSLVQGLKGDPTYLIVDGPDSIGDYGINAI------------------------CT 108
Query: 147 HLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEV 188
HLGCV NAG + CPCHGS YDA+G++ +GPAPL+L +
Sbjct: 109 HLGCVVPWNAG-ANKFMCPCHGSQYDATGKVVRGPAPLSLAL 149
>sp|A9BE84|UCRI_PROM4 Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain MIT 9211) GN=petC PE=3 SV=1
Length = 178
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 16/78 (20%)
Query: 126 PQADSERVK----DPKWLVLIG-----------VCTHLGCVPVANAGDFGGYYCPCHGSH 170
P D V+ DP +L++ G +CTHLGCV N+G Y CPCHGS
Sbjct: 73 PAGDRSLVQGLKGDPTYLIVEGSEAIGNFGINAICTHLGCVVPWNSGA-NKYICPCHGSQ 131
Query: 171 YDASGRIRKGPAPLNLEV 188
YDA+G++ +GPAPL+L +
Sbjct: 132 YDANGKVVRGPAPLSLAL 149
>sp|Q7U566|UCRI_SYNPX Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain WH8102) GN=petC PE=3 SV=1
Length = 178
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 16/78 (20%)
Query: 126 PQADSERVK----DPKWLVLIG-----------VCTHLGCVPVANAGDFGGYYCPCHGSH 170
P+ D V+ DP +L++ G +CTHLGCV N+G + CPCHGS
Sbjct: 73 PEGDRSLVQGLKGDPTYLIVEGPDAIGSYGINAICTHLGCVVPWNSGA-NKFMCPCHGSQ 131
Query: 171 YDASGRIRKGPAPLNLEV 188
YDA+G++ +GPAPL+L +
Sbjct: 132 YDATGKVVRGPAPLSLAL 149
>sp|Q5CC92|UCRIB_CYAPA Cytochrome b6-f complex iron-sulfur subunit 2, cyanelle
OS=Cyanophora paradoxa GN=petC-2 PE=2 SV=1
Length = 241
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 141 LIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPKYEFPEPGLL 199
L VCTHLGCV N + G + CPCHGS YD +G++ +GPAPL+L + E G++
Sbjct: 165 LNAVCTHLGCVVPWNQSE-GKFMCPCHGSQYDRTGKVVRGPAPLSLALAHVNVLEDGVV 222
>sp|Q0I872|UCRI_SYNS3 Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain CC9311) GN=petC PE=3 SV=1
Length = 178
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 12/65 (18%)
Query: 135 DPKWLVLIGV-----------CTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPAP 183
DP +L++ GV CTHLGCV N+G + CPCHGS YDA+G++ +GPAP
Sbjct: 86 DPTYLIVEGVDAIGSYGINAICTHLGCVVPWNSGA-NKFMCPCHGSQYDATGKVVRGPAP 144
Query: 184 LNLEV 188
L+L +
Sbjct: 145 LSLAL 149
>sp|Q5CC93|UCRIA_CYAPA Cytochrome b6-f complex iron-sulfur subunit 1, cyanelle
OS=Cyanophora paradoxa GN=petC-1 PE=2 SV=1
Length = 239
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 141 LIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPKYEFPEPGLL 199
L VCTHLGCV NA + + CPCHGS YD +G++ +GPAPL+L + E G++
Sbjct: 163 LNAVCTHLGCVVPWNASE-NKFMCPCHGSQYDRTGKVVRGPAPLSLALAHVSVLEDGVV 220
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,698,912
Number of Sequences: 539616
Number of extensions: 2914259
Number of successful extensions: 7942
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 7751
Number of HSP's gapped (non-prelim): 124
length of query: 202
length of database: 191,569,459
effective HSP length: 112
effective length of query: 90
effective length of database: 131,132,467
effective search space: 11801922030
effective search space used: 11801922030
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)