BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1736
(125 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3V0Q1|DYH12_MOUSE Dynein heavy chain 12, axonemal OS=Mus musculus GN=Dnah12 PE=1 SV=2
Length = 3086
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 71/115 (61%), Positives = 89/115 (77%)
Query: 2 TIPIDHLTFDFVVLQINKSESPPEDGVYCYGLFLDGARWDRTSNQLAEQFPKVLNDALPI 61
TIPID L ++F V+ + S++PPEDGVY +GL+LDGARWDR S LAEQ+PK+L D +PI
Sbjct: 2959 TIPIDLLGYEFEVIPFDYSDTPPEDGVYIHGLYLDGARWDRFSGLLAEQYPKLLFDLMPI 3018
Query: 62 IWFVPTKKVELQIGSRYVCPLYKTSERRGTLSTTGHSTNYVIPLLLNTGLPSSHW 116
IW P K+E+ Y+CPLYKTSER+GTLSTTGHSTN+VI +LL T P+ HW
Sbjct: 3019 IWIKPNLKIEIVKIEAYICPLYKTSERKGTLSTTGHSTNFVIAMLLKTDQPTQHW 3073
>sp|Q923J6|DYH12_RAT Dynein heavy chain 12, axonemal OS=Rattus norvegicus GN=Dnah12 PE=2
SV=2
Length = 3092
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/115 (62%), Positives = 88/115 (76%)
Query: 2 TIPIDHLTFDFVVLQINKSESPPEDGVYCYGLFLDGARWDRTSNQLAEQFPKVLNDALPI 61
TIPID L ++F V+ + + +PPEDGVY +GL+LDGARW+RTS LAEQ PK+L D +PI
Sbjct: 2966 TIPIDLLGYEFEVIPSDNATNPPEDGVYIHGLYLDGARWNRTSGLLAEQHPKLLFDLMPI 3025
Query: 62 IWFVPTKKVELQIGSRYVCPLYKTSERRGTLSTTGHSTNYVIPLLLNTGLPSSHW 116
IW P K E+ YVCPLYKTSER+GTLSTTGHSTN+VI +LL T LP+ HW
Sbjct: 3026 IWIKPNVKTEIVKTDAYVCPLYKTSERKGTLSTTGHSTNFVIAMLLRTELPAQHW 3080
>sp|Q6ZR08|DYH12_HUMAN Dynein heavy chain 12, axonemal OS=Homo sapiens GN=DNAH12 PE=2 SV=2
Length = 3092
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 70/115 (60%), Positives = 87/115 (75%)
Query: 2 TIPIDHLTFDFVVLQINKSESPPEDGVYCYGLFLDGARWDRTSNQLAEQFPKVLNDALPI 61
T PID L ++F V+ + S++ PEDGVY +GL+LDGARWDR S LAEQ+PK+L D +PI
Sbjct: 2965 TTPIDLLGYEFEVIPSDTSDTSPEDGVYIHGLYLDGARWDRESGLLAEQYPKLLFDLMPI 3024
Query: 62 IWFVPTKKVELQIGSRYVCPLYKTSERRGTLSTTGHSTNYVIPLLLNTGLPSSHW 116
IW PT+K + YVCPLYKTSER+GTLSTTGHSTN+VI +LL T P+ HW
Sbjct: 3025 IWIKPTQKSRIIKSDAYVCPLYKTSERKGTLSTTGHSTNFVIAMLLKTDQPTRHW 3079
>sp|Q63170|DYH7_RAT Dynein heavy chain 7, axonemal OS=Rattus norvegicus GN=Dnah7 PE=2
SV=2
Length = 4057
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/115 (56%), Positives = 83/115 (72%)
Query: 2 TIPIDHLTFDFVVLQINKSESPPEDGVYCYGLFLDGARWDRTSNQLAEQFPKVLNDALPI 61
TIPID L FD+ V+ + ++ PEDGVY +GLFLDGA W+R + +LAE PKVL D +P+
Sbjct: 3930 TIPIDLLGFDYEVMDDKEYKNAPEDGVYIHGLFLDGASWNRKTKKLAESHPKVLYDTVPV 3989
Query: 62 IWFVPTKKVELQIGSRYVCPLYKTSERRGTLSTTGHSTNYVIPLLLNTGLPSSHW 116
+W P KK ++ YV PLYKTSERRGTLSTTGHSTN+VI ++L + P HW
Sbjct: 3990 MWLKPCKKSDIPKRPSYVAPLYKTSERRGTLSTTGHSTNFVIAMILPSDQPKEHW 4044
>sp|Q8TD57|DYH3_HUMAN Dynein heavy chain 3, axonemal OS=Homo sapiens GN=DNAH3 PE=2 SV=1
Length = 4116
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/119 (56%), Positives = 80/119 (67%), Gaps = 1/119 (0%)
Query: 2 TIPIDHLTFDFVVL-QINKSESPPEDGVYCYGLFLDGARWDRTSNQLAEQFPKVLNDALP 60
TIPIDH+ F+F V Q E+ PEDG Y GLFL+GARWDR + Q+ E PK+L D LP
Sbjct: 3988 TIPIDHIGFEFEVTPQETVMENNPEDGAYIKGLFLEGARWDRKTMQIGESLPKILYDPLP 4047
Query: 61 IIWFVPTKKVELQIGSRYVCPLYKTSERRGTLSTTGHSTNYVIPLLLNTGLPSSHWKNK 119
IIW P + YVCP+YKTS RRGTLSTTGHSTNYV+ + L T +P HW N+
Sbjct: 4048 IIWLKPGESAMFLHQDIYVCPVYKTSARRGTLSTTGHSTNYVLSIELPTDMPQKHWINR 4106
>sp|Q8WXX0|DYH7_HUMAN Dynein heavy chain 7, axonemal OS=Homo sapiens GN=DNAH7 PE=1 SV=2
Length = 4024
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 81/115 (70%)
Query: 2 TIPIDHLTFDFVVLQINKSESPPEDGVYCYGLFLDGARWDRTSNQLAEQFPKVLNDALPI 61
TIPID L FD+ V++ + + PPEDGV+ +GLFLDGA W+R +LAE PK+L D +P+
Sbjct: 3897 TIPIDLLGFDYEVMEDKEYKHPPEDGVFIHGLFLDGASWNRKIKKLAESHPKILYDTVPV 3956
Query: 62 IWFVPTKKVELQIGSRYVCPLYKTSERRGTLSTTGHSTNYVIPLLLNTGLPSSHW 116
+W P K+ ++ YV PLYKTSERRG LSTTGHSTN+VI + L + P HW
Sbjct: 3957 MWLKPCKRADIPKRPSYVAPLYKTSERRGVLSTTGHSTNFVIAMTLPSDQPKEHW 4011
>sp|Q8BW94|DYH3_MOUSE Dynein heavy chain 3, axonemal OS=Mus musculus GN=Dnah3 PE=1 SV=2
Length = 4083
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 81/119 (68%), Gaps = 1/119 (0%)
Query: 2 TIPIDHLTFDFVVL-QINKSESPPEDGVYCYGLFLDGARWDRTSNQLAEQFPKVLNDALP 60
TIPIDH+ F+F V + E+ PEDG Y GLFL+GARWDR+++Q+ E PK+L D LP
Sbjct: 3955 TIPIDHIGFEFEVTPKETTMENIPEDGAYIKGLFLEGARWDRSTSQIGESLPKILYDPLP 4014
Query: 61 IIWFVPTKKVELQIGSRYVCPLYKTSERRGTLSTTGHSTNYVIPLLLNTGLPSSHWKNK 119
IIW P + YVCP+YKTS RRG LSTTGHSTNYV+ + L T +P HW N+
Sbjct: 4015 IIWLKPGESASFLHQDIYVCPVYKTSARRGILSTTGHSTNYVLSIELPTDMPQKHWINR 4073
>sp|Q63164|DYH1_RAT Dynein heavy chain 1, axonemal OS=Rattus norvegicus GN=Dnah1 PE=2
SV=2
Length = 4516
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
Query: 2 TIPIDHLTFDFVVLQINKSE--SPPEDGVYCYGLFLDGARWDRTSNQLAEQFPKVLNDAL 59
I ID +TFDF VL SE P G Y YGLFL+GARWD QLAE PK L +
Sbjct: 4387 VISIDTITFDFKVLSYASSEIAERPSTGCYIYGLFLEGARWDPFDFQLAESRPKELYTEM 4446
Query: 60 PIIWFVPTKKVELQIGSRYVCPLYKTSERRGTLSTTGHSTNYVIPLLLNTGLPSSHW 116
+IW +P ++Q Y+CP+YKT R GTLSTTGHSTNYVI + + + P HW
Sbjct: 4447 AVIWLLPVANRKVQNQDFYLCPIYKTLTRAGTLSTTGHSTNYVIAVEIPSNQPQRHW 4503
>sp|Q9P2D7|DYH1_HUMAN Dynein heavy chain 1, axonemal OS=Homo sapiens GN=DNAH1 PE=2 SV=4
Length = 4330
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 73/117 (62%), Gaps = 2/117 (1%)
Query: 2 TIPIDHLTFDFVVLQINKSE--SPPEDGVYCYGLFLDGARWDRTSNQLAEQFPKVLNDAL 59
I ID ++FDF V+ SE P+ G Y +GLFL+GARWD + QLAE PK L +
Sbjct: 4201 VISIDTISFDFKVMFEAPSELTQRPQVGCYIHGLFLEGARWDPEAFQLAESQPKELYTEM 4260
Query: 60 PIIWFVPTKKVELQIGSRYVCPLYKTSERRGTLSTTGHSTNYVIPLLLNTGLPSSHW 116
+IW +PT + Q Y+CP+YKT R GTLSTTGHSTNYVI + + T P HW
Sbjct: 4261 AVIWLLPTPNRKAQDQDFYLCPIYKTLTRAGTLSTTGHSTNYVIAVEIPTHQPQRHW 4317
>sp|Q9C0G6|DYH6_HUMAN Dynein heavy chain 6, axonemal OS=Homo sapiens GN=DNAH6 PE=1 SV=3
Length = 4158
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 71/139 (51%), Gaps = 23/139 (16%)
Query: 3 IPIDHLTFDFVVLQINKSESP----------------------PEDGVYCYGLFLDGARW 40
+PID L+F + V+ + ++ PEDGV +G+F+D +RW
Sbjct: 4011 LPIDELSFKYSVIPTYRDQAAVIEAAKTVQFGQELPMDMELPSPEDGVLVHGMFMDASRW 4070
Query: 41 DRTSNQLAEQFPKVLNDALPIIWFVPTKKVELQIGSRYVCPLYKTSERRGTLSTTGHSTN 100
D + + P +N LP++ F P + + + Y CPLYKT R GTLSTTGHSTN
Sbjct: 4071 DDKEMVIEDALPGQMNPVLPVVHFEPQQNYKPS-PTLYHCPLYKTGARAGTLSTTGHSTN 4129
Query: 101 YVIPLLLNTGLPSSHWKNK 119
+V+ +LL + +W K
Sbjct: 4130 FVVTVLLPSKRSKDYWIAK 4148
>sp|Q0VDD8|DYH14_HUMAN Dynein heavy chain 14, axonemal OS=Homo sapiens GN=DNAH14 PE=2 SV=3
Length = 3507
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
Query: 13 VVLQINKSESPPEDGVYCYGLFLDGARWDRTSNQLAEQFPKVLNDALPIIWFVPTK---- 68
+V + K + GVY +GLF++GARW+R L + P + P I+F+PTK
Sbjct: 3381 IVRRAFKGSASSHTGVYIFGLFIEGARWNREQKILEDSLPLEMCCDFPDIYFLPTKISTK 3440
Query: 69 --KVELQIGSR---YVCPLYKTSERRGTLSTTGHSTNYVIPLLLNTGLPSSHW 116
Q S + CP+Y+T ER L+TTG TN++ + L+T P SHW
Sbjct: 3441 TPNASNQTDSELYAFECPVYQTPERSRILATTGLPTNFLTSVYLSTKKPPSHW 3493
>sp|Q96JB1|DYH8_HUMAN Dynein heavy chain 8, axonemal OS=Homo sapiens GN=DNAH8 PE=1 SV=2
Length = 4490
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 59/114 (51%), Gaps = 10/114 (8%)
Query: 5 IDHLTFDFVVLQINKSE--SPPEDGVYCYGLFLDGARWDRTSNQLAEQFPKVLNDALPII 62
+D +T VL+ K E SPP +GVY YGL++DGA WDR + +L E PKVL LP++
Sbjct: 4373 LDTVTIHNEVLRQTKEEITSPPGEGVYIYGLYMDGAAWDRRNGKLMESTPKVLFTQLPVL 4432
Query: 63 WFVPTKKVELQIGSRYVCPLYKTSERRGTLSTTGHSTNYVIPLLLNTGLPSSHW 116
+ YVCP+YK RR L+ ++ + L T L HW
Sbjct: 4433 HIFAINSTAPKDPKLYVCPIYKKP-RRTDLT-------FITVVYLRTVLSPDHW 4478
>sp|Q91XQ0|DYH8_MOUSE Dynein heavy chain 8, axonemal OS=Mus musculus GN=Dnahc8 PE=2 SV=2
Length = 4731
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 10/114 (8%)
Query: 5 IDHLTFDFVVLQINKSE--SPPEDGVYCYGLFLDGARWDRTSNQLAEQFPKVLNDALPII 62
+D +T VL+ K E +PP +GVY YGL++DGA WDR + +L E PKVL LP++
Sbjct: 4614 LDTVTIHNEVLRQTKEEIITPPAEGVYIYGLYMDGASWDRRNGKLTESTPKVLFTQLPVL 4673
Query: 63 WFVPTKKVELQIGSRYVCPLYKTSERRGTLSTTGHSTNYVIPLLLNTGLPSSHW 116
+ YVCP+YK RR L+ ++ + L T L HW
Sbjct: 4674 HIFAINSTAPKDPKLYVCPIYKKP-RRTDLT-------FITVVYLRTVLSPDHW 4719
>sp|Q9MBF8|DYH1B_CHLRE Dynein-1-beta heavy chain, flagellar inner arm I1 complex
OS=Chlamydomonas reinhardtii GN=DHC10 PE=1 SV=1
Length = 4513
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 64/118 (54%), Gaps = 7/118 (5%)
Query: 2 TIPIDHLTFDFVVLQINKSE--SPPEDGVYCYGLFLDGARWDRTSNQLAEQFPKVLNDAL 59
++PID L+F+F ++ +++ E +PP++GVY GLFL+GA WD + L E P L +
Sbjct: 4387 SVPIDTLSFEFSIINLDEREINAPPKEGVYIKGLFLEGAGWDFENGCLCEPNPMELIVPM 4446
Query: 60 PIIWFVPTKKVELQIGSRYVCPLYKTSERRGTLSTTGHSTNYVIPLLLNTGLPS-SHW 116
PI+ F P + + Y CPLY R G T +++I + L +G HW
Sbjct: 4447 PILLFRPVENKKRTAKGIYTCPLYLYPLRTG----TRERPSFMINVDLRSGSADPDHW 4500
>sp|P0C6F1|DYH2_MOUSE Dynein heavy chain 2, axonemal OS=Mus musculus GN=Dnah2 PE=2 SV=1
Length = 4456
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 7/117 (5%)
Query: 3 IPIDHLTFDFVVLQINKSE--SPPEDGVYCYGLFLDGARWDRTSNQLAEQFPKVLNDALP 60
I +D L+++F+V ++ S PP+DGV+ GL+L+GA WDR ++ L E P L +P
Sbjct: 4331 ISVDSLSWEFIVSTVDDSNLVYPPKDGVWVRGLYLEGAGWDRKNSCLVEAEPMQLVCLMP 4390
Query: 61 IIWFVPTKKVELQIGSRYVCPLYKTSERRGTLSTTGHSTNYVIPLLLNTG-LPSSHW 116
I F P + + Y CP Y R G+ ++VI + L +G + S HW
Sbjct: 4391 TIHFRPAESRKKSAKGMYSCPCYYYPNRAGSTD----RASFVIGIDLRSGSMTSDHW 4443
>sp|Q9P225|DYH2_HUMAN Dynein heavy chain 2, axonemal OS=Homo sapiens GN=DNAH2 PE=2 SV=3
Length = 4427
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 3 IPIDHLTFDFVVLQINKSE--SPPEDGVYCYGLFLDGARWDRTSNQLAEQFPKVLNDALP 60
+ +D L+++F+V ++ S PP+DGV+ GL+L+GA WDR ++ L E P L +P
Sbjct: 4302 VSVDSLSWEFIVSTVDDSNLVYPPKDGVWVRGLYLEGAGWDRKNSCLVEAEPMQLVCLMP 4361
Query: 61 IIWFVPTKKVELQIGSRYVCPLYKTSERRGTLSTTGHSTNYVIPLLLNTG-LPSSHW 116
I F P + + Y CP Y R G + ++VI + L +G + HW
Sbjct: 4362 TIHFRPAESRKKSAKGMYSCPCYYYPNRAG----SSDRASFVIGIDLRSGAMTPDHW 4414
>sp|Q9UFH2|DYH17_HUMAN Dynein heavy chain 17, axonemal OS=Homo sapiens GN=DNAH17 PE=1 SV=2
Length = 4485
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 4 PIDHLTFDFVVLQINKSE--SPPEDGVYCYGLFLDGARWDRTSNQLAEQFPKVLNDALPI 61
P+D + V + N+ + +PP +G Y YGLF++GARWD + +AE K L A+P+
Sbjct: 4369 PLDKMCLSVEVTKKNREDMTAPPREGSYVYGLFMEGARWDTQTGVIAEARLKELTPAMPV 4428
Query: 62 IWFVPTKKVELQIGSRYVCPLYKTSER 88
I+ ++ + Y CP+YKT R
Sbjct: 4429 IFIKAIPVDRMETKNIYECPVYKTRIR 4455
>sp|Q9SMH3|DYH1A_CHLRE Dynein-1-alpha heavy chain, flagellar inner arm I1 complex
OS=Chlamydomonas reinhardtii GN=DHC1 PE=1 SV=1
Length = 4625
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 24 PEDGVYCYGLFLDGARWDRTSNQLAEQFPKVLNDALPIIWFVPTKKVELQIGSRYVCPLY 83
P+ G Y GL+L+GA WD ++QL +Q PKVL + LPI+ +P + +L++ + + P+Y
Sbjct: 4525 PKYGCYMSGLYLEGAAWDLEASQLRKQDPKVLVNELPILQVIPIEANKLKLANTFRAPVY 4584
Query: 84 KTSERRGTLSTTGHSTNYVIPLLLNTGLPSSHW 116
T RR + V L + SSHW
Sbjct: 4585 VTQARRNAM-----GVGLVFDADLASAEHSSHW 4612
>sp|Q69Z23|DYH17_MOUSE Dynein heavy chain 17, axonemal OS=Mus musculus GN=Dnah17 PE=2 SV=2
Length = 4481
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 4 PIDHLTFDFVVLQINKSE--SPPEDGVYCYGLFLDGARWDRTSNQLAEQFPKVLNDALPI 61
P+D + V + N+ + +PP +G Y YGLF++GARWD + +AE K L +P+
Sbjct: 4365 PLDKMCLSVEVTKKNREDMTAPPREGSYVYGLFMEGARWDTQTGVIAEARLKDLTPVMPV 4424
Query: 62 IWFVPTKKVELQIGSRYVCPLYKTSER 88
I+ ++ + Y CP+YKT R
Sbjct: 4425 IFIKAIPVDRMETKNIYECPVYKTRIR 4451
>sp|Q8TE73|DYH5_HUMAN Dynein heavy chain 5, axonemal OS=Homo sapiens GN=DNAH5 PE=1 SV=3
Length = 4624
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 22 SPPEDGVYCYGLFLDGARWDRTSNQLAEQFPKVLNDALPIIWFVPTKKVELQIGSRYVCP 81
+PP +GVY YGL+L+GA WD+ + +L E PKVL + +P+I L+ Y CP
Sbjct: 4527 APPTEGVYVYGLYLEGAGWDKRNMKLIESKPKVLFELMPVIRIYAENNT-LRDPRFYSCP 4585
Query: 82 LYKTSERRGTLSTTGHSTNYVIPLLLNTGLPSSHW 116
+YK R NY+ + L T HW
Sbjct: 4586 IYKKPVRT--------DLNYIAAVDLRTAQTPEHW 4612
>sp|Q8VHE6|DYH5_MOUSE Dynein heavy chain 5, axonemal OS=Mus musculus GN=Dnah5 PE=1 SV=2
Length = 4621
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 22 SPPEDGVYCYGLFLDGARWDRTSNQLAEQFPKVLNDALPIIWFVPTKKVELQIGSRYVCP 81
+PP +GVY YGL+L+GA WD+ + +L E PKVL + +P+I + Y CP
Sbjct: 4524 APPTEGVYVYGLYLEGAGWDKRNMKLIESKPKVLFELMPVIRIFAENNTA-RDPRLYCCP 4582
Query: 82 LYKTSERRGTLSTTGHSTNYVIPLLLNTGLPSSHW 116
+YK R NY+ + L T HW
Sbjct: 4583 IYKKPVRT--------DLNYIAAVDLKTAQAPEHW 4609
>sp|P39057|DYHC_HELCR Dynein beta chain, ciliary OS=Heliocidaris crassispina PE=1 SV=1
Length = 4466
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Query: 4 PIDHLTFDFVVLQINKSE--SPPEDGVYCYGLFLDGARWDRTSNQLAEQFPKVLNDALPI 61
P+D + V + NK + S P +G Y +GLF++GARWD +N +A+ K L +P+
Sbjct: 4350 PLDKMCLQCDVTKKNKEDFSSAPREGSYVHGLFMEGARWDTQTNMIADARLKELAPNMPV 4409
Query: 62 IWF--VPTKKVELQIGSRYVCPLYKTSER 88
I+ +P K + + + Y CP+YKT +R
Sbjct: 4410 IFIKAIPVDKQDTR--NIYECPVYKTKQR 4436
>sp|P23098|DYHC_TRIGR Dynein beta chain, ciliary OS=Tripneustes gratilla PE=1 SV=1
Length = 4466
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Query: 4 PIDHLTFDFVVLQINKSE--SPPEDGVYCYGLFLDGARWDRTSNQLAEQFPKVLNDALPI 61
P+D + V + NK + S P +G Y +GLF++GARWD +N +A+ K L +P+
Sbjct: 4350 PLDKMCLQCDVTKKNKEDFSSAPREGSYVHGLFMEGARWDTQTNMIADARLKELAPNMPV 4409
Query: 62 IWF--VPTKKVELQIGSRYVCPLYKTSER 88
I+ +P K + + + Y CP+YKT +R
Sbjct: 4410 IFIKAIPVDKQDTR--NIYECPVYKTKQR 4436
>sp|Q9NYC9|DYH9_HUMAN Dynein heavy chain 9, axonemal OS=Homo sapiens GN=DNAH9 PE=1 SV=3
Length = 4486
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 4 PIDHLTFDFVVLQINKSE--SPPEDGVYCYGLFLDGARWDRTSNQLAEQFPKVLNDALPI 61
P+D + + + N+ E SPP +G Y +GLF++GA WD + + E K L +P+
Sbjct: 4370 PLDQMALQCDMTKKNREEFRSPPREGAYIHGLFMEGACWDTQAGIITEAKLKDLTPPMPV 4429
Query: 62 IWF--VPTKKVELQIGSRYVCPLYKTSER 88
++ +P K + + S Y CP+YKTS+R
Sbjct: 4430 MFIKAIPADKQDCR--SVYSCPVYKTSQR 4456
>sp|Q39610|DYHA_CHLRE Dynein alpha chain, flagellar outer arm OS=Chlamydomonas reinhardtii
GN=ODA11 PE=3 SV=2
Length = 4499
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 3 IPIDHLTFDFVVLQINKSESPPED---GVYCYGLFLDGARWDRTSNQLAEQFPKVLNDAL 59
+P+D + F V ++ E E GVY +GL L+GARWDR L + P L+ A+
Sbjct: 4374 LPLDVMKFMTEVTRMTSPEQVTEAAPLGVYVHGLVLEGARWDREDGCLRDSKPNELHPAM 4433
Query: 60 PIIWFVPTKKVELQIGSRYVCPLYKTSERRGTLS 93
P++ P + + Y CP+Y +R S
Sbjct: 4434 PVLQVKPVTADQFNLEGYYECPVYTNMQRANVYS 4467
>sp|Q96DT5|DYH11_HUMAN Dynein heavy chain 11, axonemal OS=Homo sapiens GN=DNAH11 PE=1 SV=3
Length = 4523
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 23 PPEDGVYCYGLFLDGARWDRTSNQLAEQFPKVLNDALPIIWFVPTKKVELQIGSRYVCPL 82
PP +G Y +GLF++GARWD + + E K L +P+I+ T + Y CP+
Sbjct: 4428 PPREGAYLHGLFMEGARWDTQAGTIVEARLKELACPMPVIFAKATPVDRQETKQTYECPV 4487
Query: 83 YKTSER 88
Y+T R
Sbjct: 4488 YRTKLR 4493
>sp|Q8IVF4|DYH10_HUMAN Dynein heavy chain 10, axonemal OS=Homo sapiens GN=DNAH10 PE=1 SV=4
Length = 4471
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 13/113 (11%)
Query: 4 PIDHLTFDFVVLQINKSESPPE---DGVYCYGLFLDGARWDRTSNQLAEQFPKVLNDALP 60
P+D T V + ++ E G + GL+L+GA WD L + PKVL LP
Sbjct: 4349 PLDRSTLFTQVTKFQDADEVNERAGQGCFVSGLYLEGADWDIEKGCLIKSKPKVLVVDLP 4408
Query: 61 IIWFVPTKKVELQIGSRYVCPLYKTSERRGTLS----------TTGHSTNYVI 103
I+ +P + L++ + + P+Y TS RR + TT H +++V+
Sbjct: 4409 ILKIIPIEAHRLKLQNTFRTPVYTTSMRRNAMGVGLVFEADLFTTRHISHWVL 4461
>sp|Q39565|DYHB_CHLRE Dynein beta chain, flagellar outer arm OS=Chlamydomonas reinhardtii
GN=ODA4 PE=3 SV=1
Length = 4568
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%)
Query: 16 QINKSESPPEDGVYCYGLFLDGARWDRTSNQLAEQFPKVLNDALPIIWFVPTKKVELQIG 75
Q ++ E+ DG + +GL L+GARWD L + PK L +P+I + + ++
Sbjct: 4465 QPDQIEANSRDGAFIHGLTLEGARWDDKIGALDDSKPKELFCPMPVILVRAVTQDKAEMK 4524
Query: 76 SRYVCPLYKTSER 88
Y CP+Y T R
Sbjct: 4525 DVYKCPVYTTEAR 4537
>sp|Q39575|DYHG_CHLRE Dynein gamma chain, flagellar outer arm OS=Chlamydomonas reinhardtii
GN=ODA2 PE=1 SV=1
Length = 4485
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 1 MTIPIDHLTFDFVVLQINKSESPPEDGVYCYGLFLDGARWDRTSNQLAEQFPKVLNDALP 60
M+ + H DF L+ E PE GVY YGL+LD R D N+L + PK L + LP
Sbjct: 4371 MSSEVTHRPKDFESLK----EGAPE-GVYVYGLYLD-LRLDGRENRLMDSDPKKLFNPLP 4424
Query: 61 IIWFVPTKKVELQIGSRYVCPL-YKTSERRGTLSTTGHSTNYVIPLLLNTGLPSSHW 116
++ + + Y P Y+ R+G N++ + T S W
Sbjct: 4425 VLHVDGVLAKDKKRSGLYEAPKPYRVKARKG--------LNFITTFSVRTEDDKSKW 4473
>sp|Q8IID4|DYHC2_PLAF7 Dynein heavy chain-like protein PF11_0240 OS=Plasmodium falciparum
(isolate 3D7) GN=PF11_0240 PE=3 SV=1
Length = 5251
Score = 34.3 bits (77), Expect = 0.25, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 26/116 (22%)
Query: 3 IPIDHLTFDFVVLQINKSE--SPPEDGVYCYGLFLDGARW-----------------DRT 43
+PID L + V I K E + + +Y +GL+L GA W D
Sbjct: 5107 VPIDKLKLKWQVTNITKLEDLNNKNNALYIHGLYLQGASWFINSKNDTFTFDKDNINDNV 5166
Query: 44 S-NQLAEQFPKVLNDALPIIWF--VPTKKVEL---QIGSRYV-CPLYKTSERRGTL 92
S + E PK + ++P+I+ + ++ EL + R + PLY TS+R T
Sbjct: 5167 SYGNIIESVPKHIYYSMPLIYVYCISNEQDELLKENMEYRSLDTPLYVTSDRGNTF 5222
>sp|Q9UUH0|YKIC_SCHPO Uncharacterized protein C630.12 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC630.12 PE=4 SV=1
Length = 422
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 77 RYVCPLYKTSERRGTLSTTGHSTNYVIPLLLNT 109
RY PLYKT RR +LSTT H ++ + L+T
Sbjct: 370 RYSLPLYKTHARRFSLSTTIHLFKKIVRITLST 402
>sp|Q8JVC2|RDRP_PCVC RNA-directed RNA polymerase OS=Penicillium chrysogenum virus
(isolate Caston/2003) GN=p1 PE=4 SV=1
Length = 1117
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Query: 54 VLNDALPIIWFVPTKKVELQIGSRYVCPLYKTSERRGTLSTTGHSTN 100
+L+ ++P++ FV T++ L+IG+R V L TL TT H N
Sbjct: 150 LLDYSVPVVIFVHTEETALEIGARPVACL--------TLETTAHEMN 188
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,851,208
Number of Sequences: 539616
Number of extensions: 1824809
Number of successful extensions: 3419
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3378
Number of HSP's gapped (non-prelim): 35
length of query: 125
length of database: 191,569,459
effective HSP length: 92
effective length of query: 33
effective length of database: 141,924,787
effective search space: 4683517971
effective search space used: 4683517971
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)