Query psy1736
Match_columns 125
No_of_seqs 102 out of 856
Neff 7.8
Searched_HMMs 13730
Date Fri Aug 16 20:23:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1736.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/1736hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1bdsa_ g.9.1.1 (A:) BDs-I def 43.1 2.5 0.00018 20.6 0.1 12 112-123 12-23 (43)
2 d3b5ha2 b.1.1.4 (A:23-102) Cer 23.7 28 0.0021 19.5 2.5 43 35-86 28-70 (80)
3 d1ig3a1 b.82.6.1 (A:179-263) T 23.6 14 0.00099 20.9 1.1 19 30-48 34-52 (85)
4 d1e0na_ b.72.1.1 (A:) Hypothet 20.4 14 0.001 16.2 0.5 10 80-89 11-20 (27)
5 d1wv3a2 b.26.1.4 (A:79-186) Pr 17.5 32 0.0024 19.4 1.8 14 24-37 75-88 (108)
6 d2h7aa1 d.350.1.1 (A:2-110) Hy 13.0 47 0.0034 19.6 1.8 13 78-90 13-25 (109)
7 d1iqqa_ d.124.1.1 (A:) S3-RNas 11.3 93 0.0067 19.5 3.1 33 6-38 2-40 (200)
8 d2dg1a1 b.68.6.1 (A:6-324) Lac 10.0 66 0.0048 21.3 2.0 21 31-51 38-59 (319)
9 d1adta3 g.51.1.1 (A:386-529) S 9.9 39 0.0028 21.0 0.6 13 77-89 62-76 (144)
10 d1uila_ d.50.1.1 (A:) ATP-depe 9.0 1.8E+02 0.013 16.5 3.9 36 81-121 43-78 (113)
No 1
>d1bdsa_ g.9.1.1 (A:) BDs-I defensin {Sea anemone (Anemonia sulcata) [TaxId: 6108]}
Probab=43.06 E-value=2.5 Score=20.56 Aligned_cols=12 Identities=8% Similarity=0.075 Sum_probs=9.5
Q ss_pred CCCeEEeeceee
Q psy1736 112 PSSHWKNKCGQV 123 (125)
Q Consensus 112 ~~~~Wi~rgval 123 (125)
.-+.||+||+|-
T Consensus 12 rgdlwilrgtcp 23 (43)
T d1bdsa_ 12 RGDLWILRGTCP 23 (43)
T ss_dssp CCEEECSCSSCC
T ss_pred CCcEEEEecccC
Confidence 457899999874
No 2
>d3b5ha2 b.1.1.4 (A:23-102) Cervical EMMPRIN {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.69 E-value=28 Score=19.50 Aligned_cols=43 Identities=16% Similarity=0.240 Sum_probs=24.6
Q ss_pred EEeeeEeCCCCeeeecCCccccccCCeEEEEeeeccccCCCCeEEeeeeeee
Q psy1736 35 LDGARWDRTSNQLAEQFPKVLNDALPIIWFVPTKKVELQIGSRYVCPLYKTS 86 (125)
Q Consensus 35 LeGA~Wd~~~~~L~e~~~~~l~~~lPvi~l~~~~~~~~~~~~~y~cPvY~~~ 86 (125)
++|-+|-.....|.|.......... + .......+.|.| ||++.
T Consensus 28 i~ghrW~K~gkvl~ed~~~~~~tey-----~---V~~~D~SGeY~C-VFl~~ 70 (80)
T d3b5ha2 28 VTGHRWLKGGVVLKEDALPGQKTEF-----K---VDSDDQWGEYSC-VFLPE 70 (80)
T ss_dssp CCEEEEESSSEEEECTTCCCSEEEE-----E---ECGGGCCEEEEE-EEEST
T ss_pred eeeeEEeeCCEEccccCCCCCceEE-----E---EecCCCCceEEE-EEcCC
Confidence 6788999888888875432222111 1 112235677888 67643
No 3
>d1ig3a1 b.82.6.1 (A:179-263) Thiamin pyrophosphokinase, substrate-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.56 E-value=14 Score=20.87 Aligned_cols=19 Identities=26% Similarity=0.672 Sum_probs=15.7
Q ss_pred EcceEEEeeeEeCCCCeee
Q psy1736 30 CYGLFLDGARWDRTSNQLA 48 (125)
Q Consensus 30 v~GL~LeGA~Wd~~~~~L~ 48 (125)
+.|+.+.|.+|+.++..|.
T Consensus 34 ~~~vt~~Glky~L~~~~l~ 52 (85)
T d1ig3a1 34 CNQVTTTGLKWNLTNDVLG 52 (85)
T ss_dssp EEEEEEESBSSCCSSEEEB
T ss_pred ceeEEEeCCEEeCCCCEEE
Confidence 5788999999999876654
No 4
>d1e0na_ b.72.1.1 (A:) Hypothetical protein Yjq8 (Set2p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.40 E-value=14 Score=16.20 Aligned_cols=10 Identities=40% Similarity=0.816 Sum_probs=8.2
Q ss_pred eeeeeeeeeC
Q psy1736 80 CPLYKTSERR 89 (125)
Q Consensus 80 cPvY~~~~R~ 89 (125)
-|+|.+.+|.
T Consensus 11 rpmyynaq~q 20 (27)
T d1e0na_ 11 RPLYYNAEQK 20 (27)
T ss_dssp SEEEEETTTT
T ss_pred ceeeeehhhh
Confidence 3899998886
No 5
>d1wv3a2 b.26.1.4 (A:79-186) Protein EssC {Staphylococcus aureus [TaxId: 1280]}
Probab=17.50 E-value=32 Score=19.36 Aligned_cols=14 Identities=29% Similarity=0.584 Sum_probs=11.4
Q ss_pred CCCceEEcceEEEe
Q psy1736 24 PEDGVYCYGLFLDG 37 (125)
Q Consensus 24 ~~~G~~v~GL~LeG 37 (125)
.++-+||.|++||-
T Consensus 75 igdhiyvegiwlev 88 (108)
T d1wv3a2 75 IGDHIYVEGIWLEV 88 (108)
T ss_dssp TTCEEEETTEEEEE
T ss_pred ecceEEEEEEEEEE
Confidence 35679999999983
No 6
>d2h7aa1 d.350.1.1 (A:2-110) Hypothetical protein YcgL {Escherichia coli [TaxId: 562]}
Probab=12.97 E-value=47 Score=19.62 Aligned_cols=13 Identities=31% Similarity=0.800 Sum_probs=9.0
Q ss_pred EEeeeeeeeeeCC
Q psy1736 78 YVCPLYKTSERRG 90 (125)
Q Consensus 78 y~cPvY~~~~R~~ 90 (125)
..|=||+++.|.+
T Consensus 13 M~C~IYKS~kK~~ 25 (109)
T d2h7aa1 13 MFCVIYRSSKRDQ 25 (109)
T ss_dssp CCEEEEEETTSSS
T ss_pred eEEEEeccCCCCC
Confidence 4577777777765
No 7
>d1iqqa_ d.124.1.1 (A:) S3-RNase {Japanese pear (Pyrus pyrifolia) [TaxId: 3767]}
Probab=11.32 E-value=93 Score=19.55 Aligned_cols=33 Identities=18% Similarity=0.250 Sum_probs=20.1
Q ss_pred eEEEeEEEEEec------cCcCCCCCCceEEcceEEEee
Q psy1736 6 DHLTFDFVVLQI------NKSESPPEDGVYCYGLFLDGA 38 (125)
Q Consensus 6 d~l~~~~~v~~~------~~~~~~~~~G~~v~GL~LeGA 38 (125)
|-+.|..++... .....++..++.||||+=+..
T Consensus 2 Dy~~l~~~Wpps~C~~~~~~C~~~~~~~fTIHGLWP~~~ 40 (200)
T d1iqqa_ 2 DYFQFTQQYQLAVCNSNRTLCKDPPDKLFTVHGLWPSNM 40 (200)
T ss_dssp CEEEEEEEEHHHHTTSSSSCCSSCCCSSEEEEEEEEECS
T ss_pred ceEEEEEECChHHhCCCCCCCCCCCCCCeEEEcccCCCC
Confidence 445566666322 123345567899999998743
No 8
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}
Probab=10.03 E-value=66 Score=21.31 Aligned_cols=21 Identities=38% Similarity=0.664 Sum_probs=14.1
Q ss_pred cceEEEeeeEeCCCCe-eeecC
Q psy1736 31 YGLFLDGARWDRTSNQ-LAEQF 51 (125)
Q Consensus 31 ~GL~LeGA~Wd~~~~~-L~e~~ 51 (125)
.|++|||-.||.+... +.|..
T Consensus 38 ~~~~lEG~~~D~~G~Ly~~D~~ 59 (319)
T d2dg1a1 38 KGLQLEGLNFDRQGQLFLLDVF 59 (319)
T ss_dssp SCCCEEEEEECTTSCEEEEETT
T ss_pred CCcCcEeCEECCCCCEEEEECC
Confidence 4788999999976432 34433
No 9
>d1adta3 g.51.1.1 (A:386-529) Second Zn-domain of early E2A DNA-binding protein, ADDBP {Human adenovirus type 5 [TaxId: 28285]}
Probab=9.87 E-value=39 Score=21.02 Aligned_cols=13 Identities=31% Similarity=0.948 Sum_probs=4.0
Q ss_pred eEEe--eeeeeeeeC
Q psy1736 77 RYVC--PLYKTSERR 89 (125)
Q Consensus 77 ~y~c--PvY~~~~R~ 89 (125)
+|+| |||+++.+.
T Consensus 62 VFQCCNPv~rnsra~ 76 (144)
T d1adta3 62 VFQCCNPVYRNSRAQ 76 (144)
T ss_dssp EEECCCC--------
T ss_pred EEecCCccccCcccC
Confidence 5788 999987664
No 10
>d1uila_ d.50.1.1 (A:) ATP-dependent RNA helicase A, Dhx9 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=9.01 E-value=1.8e+02 Score=16.54 Aligned_cols=36 Identities=11% Similarity=0.170 Sum_probs=20.1
Q ss_pred eeeeeeeeCCcccCCCCcccEEEEEEecCCCCCCeEEeece
Q psy1736 81 PLYKTSERRGTLSTTGHSTNYVIPLLLNTGLPSSHWKNKCG 121 (125)
Q Consensus 81 PvY~~~~R~~~l~t~g~s~n~v~~v~L~~~~~~~~Wi~rgv 121 (125)
|.|...++ | ..|...|.+.|.+.........+-+|.
T Consensus 43 p~Y~i~~~-G----p~H~~~F~~~v~i~~~~~~~~~~~~G~ 78 (113)
T d1uila_ 43 GEYKYTQV-G----PDHNRSFIAEMTIYIKQLGRRIFAREH 78 (113)
T ss_dssp CCCEEEEE-S----CSTTCEEEEEEEEEETTTTEEEEEECC
T ss_pred CceEEeee-c----cCCCCeEEEEEEEeeeccCCeEEeecc
Confidence 78876544 2 135667888888754332334444443
Done!