Your job contains 1 sequence.
>psy17363
MEDTEEYYNEILNYPKSVQDALKEIMPSTDVLDDHDFDSVQYINSLFPTEQSLSNIDDVI
MKMESNIKEMDEEIETVVRSQSGVGQDGKKALEDSQKVIMQLFSQVRDIKSKAEKSEEMV
REITRDIKLLDTAKRNLTTAITCLNHLHMLVTGVHSLRTLIEQRQYGEIVMPLQGVIEVM
KHFQDSTDIPQILELRSQVAQIQNTLSEQITQDLKNAFQNPSSGSFVPSKQIAEALRVVS
ILDPKVKKNILEWFISLQLSEYLVLFDESEDSAWLDKIDKRYAWFKKQLLHVEDKFGTLF
PPHWQLSEKITLEFCERTRSELGKIMSKRKFEIDVKLLLYAIQKTSNFEQLLEKRFADDE
TEGENKTKFDGIIGSCFQNYLYIYIESLDRNLSDLIDRFAEDSKQVLNNINETCETSAAP
VLPSCADLFMFYKKSLVQCTQLSTGEPMVALATTFQQYLRHYAHKVLQQNVSKQAGQTAN
TTLASVSNITRDLGLIKDQRTKYTPQEQAKICCVLTTAEYCLETTQQLEQKLKEKVDPNL
ANKIDLSNEQDVFHNVISSCIQLLVQDLELACEPALTAMVKTNWSSVESVGDQSGYVTAI
TSHLKQSVPLIRTNLSSSRKYFTQFCVKFANSFIPKLVQHVFKCKPLSTVGAEQLLLDIH
MLKTVLLDLPSIGSQVVRKAPASFTKVVVKGMTKAEMILKLVMASAEPDICFVEQFCKLL
PESDMTEFQRILDMKGLKTNEKNNLINLFRPKNPSNTSSSLVAATNSTSSSRQDTSSIQK
LNNLIKKNLM
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17363
(790 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q5ZLD7 - symbol:VPS53 "Vacuolar protein sorting... 1185 1.5e-221 2
UNIPROTKB|E1BJW7 - symbol:VPS53 "Uncharacterized protein"... 1185 2.5e-221 2
MGI|MGI:1915549 - symbol:Vps53 "vacuolar protein sorting ... 1180 6.6e-221 2
UNIPROTKB|F1RHI3 - symbol:VPS53 "Uncharacterized protein"... 1175 9.7e-220 2
UNIPROTKB|E2R1D2 - symbol:VPS53 "Uncharacterized protein"... 1173 9.7e-220 2
ZFIN|ZDB-GENE-041114-199 - symbol:vps53 "vacuolar protein... 1179 1.2e-219 2
UNIPROTKB|Q5VIR6 - symbol:VPS53 "Vacuolar protein sorting... 970 2.0e-184 2
DICTYBASE|DDB_G0285901 - symbol:DDB_G0285901 "Vps53-like ... 628 7.3e-111 3
WB|WBGene00011502 - symbol:vps-53 species:6239 "Caenorhab... 979 1.3e-98 1
UNIPROTKB|P34561 - symbol:vps-53 "Vacuolar protein sortin... 979 1.3e-98 1
POMBASE|SPAC3A12.15 - symbol:vps53 "GARP complex subunit ... 499 4.0e-67 2
TAIR|locus:2036396 - symbol:AT1G50970 "AT1G50970" species... 513 2.8e-63 2
CGD|CAL0005237 - symbol:VPS53 species:5476 "Candida albic... 329 4.2e-41 2
UNIPROTKB|Q5AB78 - symbol:VPS53 "Putative uncharacterized... 329 4.2e-41 2
SGD|S000003566 - symbol:VPS53 "Component of the GARP (Gol... 400 5.9e-34 1
RGD|1311391 - symbol:Vps53 "vacuolar protein sorting 53 h... 314 4.1e-27 1
UNIPROTKB|G4NB99 - symbol:MGG_00594 "Uncharacterized prot... 135 0.00026 2
>UNIPROTKB|Q5ZLD7 [details] [associations]
symbol:VPS53 "Vacuolar protein sorting-associated protein
53 homolog" species:9031 "Gallus gallus" [GO:0015031 "protein
transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
Pfam:PF04100 GO:GO:0005794 GO:GO:0015031 GO:GO:0010008
eggNOG:NOG327715 HOGENOM:HOG000265899 InterPro:IPR007234
EMBL:AJ719797 IPI:IPI00589817 RefSeq:NP_001012824.1
UniGene:Gga.10180 ProteinModelPortal:Q5ZLD7 STRING:Q5ZLD7
GeneID:417622 KEGG:gga:417622 CTD:55275 HOVERGEN:HBG092351
InParanoid:Q5ZLD7 OrthoDB:EOG4894KW NextBio:20820897 Uniprot:Q5ZLD7
Length = 831
Score = 1185 (422.2 bits), Expect = 1.5e-221, Sum P(2) = 1.5e-221
Identities = 245/449 (54%), Positives = 312/449 (69%)
Query: 345 TSNFEQLLEKRFADDETEGE-NKTKFDGIIGSCFQNYLYIYIESLDRNLSDLIDRFAEDS 403
T E ++EK AD + + F GI+ CF+ +LY+YIES D+NLS+LIDRF D
Sbjct: 391 TETDEIVIEKSDADKPKKPKVPDNPFHGIVSKCFEPHLYVYIESQDKNLSELIDRFVADF 450
Query: 404 KQVLNNINETCETSAAPVLPSCADLFMFYKKSLVQCTQLSTGEPMVALATTFQQYLRHYA 463
K + A VLPSCADLF++YKK +VQC+QLSTGEPM+AL T FQ+YLR YA
Sbjct: 451 K-AQGPPKPNVDEGGA-VLPSCADLFVYYKKCMVQCSQLSTGEPMIALTTIFQKYLREYA 508
Query: 464 HKVLQQNVSKQAGQTANTTLASVSNITRDLGLIKDQRTKYTPQEQAKICCVLTTAEYCLE 523
K+L N+ K + T+ S+ + G + K+T +E IC +L+TAEYCL
Sbjct: 509 WKILSGNLPKTTSSSGGLTITSL--LKEKEG---SEVAKFTLEELCLICSILSTAEYCLA 563
Query: 524 TTQQLEQKLKEKVDPNLANKIDLSNEQDVFHNVISSCIQLLVQDLELACEPALTAMVKTN 583
TTQQLE+KLKEKVD +L +I+L+ E D F VIS+ IQLLVQDL+ AC+PALTAM K
Sbjct: 564 TTQQLEEKLKEKVDASLVERINLTGETDTFSIVISNSIQLLVQDLDAACDPALTAMSKMQ 623
Query: 584 WSSVESVGDQSGYVTAITSHLKQSVPLIRTNLSSSRKYFTQFCVKFANSFIPKLVQHVFK 643
W +VE VGDQS YVT++ H+KQ+VP+IR NL+S+RKYFTQFC+KFANSFIPK + H+FK
Sbjct: 624 WQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCIKFANSFIPKFINHLFK 683
Query: 644 CKPLSTVGAEQLLLDIHMLKTVLLDLPSIGSQVVRKAPASFTKVVVKGMTKAEMILKLVM 703
CKP+S VGAEQLLLD H LK VLLDLPSIGSQVVRKAPAS+T++VVKGMT+AEMILK+VM
Sbjct: 684 CKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRKAPASYTRIVVKGMTRAEMILKVVM 743
Query: 704 ASAEPDICFVEQFCKLLPESDMTEFQRILDMKGLKTNEKNNLINLFR---PKNPSNTSSS 760
A EP + FV+ + KLL + FQ+ILDMKGLK +E+++++ LFR P PS +S
Sbjct: 744 APHEPPVVFVDNYIKLLADCSTDTFQKILDMKGLKRSEQSSMLELFRQRLPAPPSGVENS 803
Query: 761 LVAAXXXXXXXXXXXXXIQKLNNLIKKNL 789
+ I+KL LIKK L
Sbjct: 804 -GSLSLSAPTPEQESSRIRKLEKLIKKRL 831
Score = 977 (349.0 bits), Expect = 1.5e-221, Sum P(2) = 1.5e-221
Identities = 191/349 (54%), Positives = 258/349 (73%)
Query: 12 LNYPKSVQDALKEIMPSTDVLDDHDFDSVQYINSLFPTEQSLSNIDDVIMKMESNIKEMD 71
L +VQ A++++ PS D LD DF++V+YIN+LFPTEQSL+NID+V+ K+ I+++D
Sbjct: 16 LELAPAVQAAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLANIDEVVNKIRLKIRKLD 75
Query: 72 EEIETVVRSQSGVGQDGKKALEDSQKVIMQLFSQVRDIKSKAEKSEEMVREITRDIKLLD 131
+ I TVVR Q+ VGQDG++ALE++QK I QLF +++DIK KAEKSE+MV+EITRDIK LD
Sbjct: 76 DNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEKSEQMVKEITRDIKQLD 135
Query: 132 TAKRNLTTAITCLNHLHMLVTGVHSLRTLIEQRQYGEIVMPLQGVIEVMKHFQDSTDIPQ 191
AKR+LTT+IT LNHLHML GV SL + +RQYGE+ LQGV+ V++HF IPQ
Sbjct: 136 HAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQGVVNVLEHFNKYMGIPQ 195
Query: 192 ILELRSQVAQIQNTLSEQITQDLKNAFQNPSSGSFVP---SKQIAEALRVVSILDPKVKK 248
I +L +V QN L +QI D + AF PS G+ P S + +A V ++LDP++K+
Sbjct: 196 IRQLSERVKAAQNELGQQILADFEEAF--PSQGTKRPGGPSNVLRDACLVANVLDPRIKQ 253
Query: 249 NILEWFISLQLSEYLVLFDESEDSAWLDKIDKRYAWFKKQLLHVEDKFGTLFPPHWQLSE 308
I++ FI LSEYLVLF E++D AWLDKID+RYAW K+QL+ E+K+G +FP W ++E
Sbjct: 254 EIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEEKYGRMFPQEWCMTE 313
Query: 309 KITLEFCERTRSELGKIMSKRKFEIDVKLLLYAIQKTSNFEQLLEKRFA 357
+I +EFC TR+EL KIM R EI+VKLLL+AIQ+T+NFE LL KRF+
Sbjct: 314 RIAVEFCHVTRTELAKIMRTRAKEIEVKLLLFAIQRTTNFEGLLAKRFS 362
>UNIPROTKB|E1BJW7 [details] [associations]
symbol:VPS53 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000938 "GARP complex" evidence=IEA] Pfam:PF04100
GeneTree:ENSGT00390000015165 OMA:KFINHLF InterPro:IPR007234
CTD:55275 EMBL:DAAA02048650 EMBL:DAAA02048651 EMBL:DAAA02048652
IPI:IPI00699470 RefSeq:NP_001180097.1 UniGene:Bt.106826
Ensembl:ENSBTAT00000024133 GeneID:512144 KEGG:bta:512144
NextBio:20870262 Uniprot:E1BJW7
Length = 832
Score = 1185 (422.2 bits), Expect = 2.5e-221, Sum P(2) = 2.5e-221
Identities = 242/424 (57%), Positives = 303/424 (71%)
Query: 369 FDGIIGSCFQNYLYIYIESLDRNLSDLIDRFAEDSKQVLNNINETCETSAAPVLPSCADL 428
F GI+ CF+ +LY+YIES D+NL +LIDRF D K T E A VLPSCADL
Sbjct: 417 FHGIVSKCFEPHLYVYIESQDKNLGELIDRFVADFKAQGPPKPNTDEGGA--VLPSCADL 474
Query: 429 FMFYKKSLVQCTQLSTGEPMVALATTFQQYLRHYAHKVLQQNVSKQAGQTANTTLASVSN 488
F++YKK +VQC+QLSTGEPM+AL T FQ+YLR YA K+L N+ K + T++S+
Sbjct: 475 FVYYKKCMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTSSSGGLTISSL-- 532
Query: 489 ITRDLGLIKDQRTKYTPQEQAKICCVLTTAEYCLETTQQLEQKLKEKVDPNLANKIDLSN 548
+ G + K+T +E IC +L+TAEYCL TTQQLE+KLKEKVD +L +I+L+
Sbjct: 533 LKEKEG---SEAAKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDVSLTERINLTG 589
Query: 549 EQDVFHNVISSCIQLLVQDLELACEPALTAMVKTNWSSVESVGDQSGYVTAITSHLKQSV 608
E D F VISS IQLLVQDL+ AC+PALTAM K W +VE VGDQS YVT++ H+KQ+V
Sbjct: 590 EMDTFSTVISSSIQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNV 649
Query: 609 PLIRTNLSSSRKYFTQFCVKFANSFIPKLVQHVFKCKPLSTVGAEQLLLDIHMLKTVLLD 668
P+IR NL+S+RKYFTQFC+KFANSFIPK + H+FKCKP+S VGAEQLLLD H LK VLLD
Sbjct: 650 PIIRDNLASTRKYFTQFCIKFANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLD 709
Query: 669 LPSIGSQVVRKAPASFTKVVVKGMTKAEMILKLVMASAEPDICFVEQFCKLLPESDMTEF 728
LPSIGSQVVRKAPAS+TK+VVKGMT+AEMILK+VMA EP + FV+ + KLL + + F
Sbjct: 710 LPSIGSQVVRKAPASYTKIVVKGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNTETF 769
Query: 729 QRILDMKGLKTNEKNNLINLFR---PKNPSNTSSSLVAAXXXXXXXXXXXXXIQKLNNLI 785
Q+ILDMKGLK +E+++++ LFR P PS S + I+KL LI
Sbjct: 770 QKILDMKGLKRSEQSSMLELFRQRLPAPPSGPEGSS-SLSLLAPTPEQESSRIRKLEKLI 828
Query: 786 KKNL 789
KK L
Sbjct: 829 KKRL 832
Score = 975 (348.3 bits), Expect = 2.5e-221, Sum P(2) = 2.5e-221
Identities = 195/364 (53%), Positives = 263/364 (72%)
Query: 1 MEDTE-EYYNE---ILNYPKSVQDALKEIMPSTDVLDDHDFDSVQYINSLFPTEQSLSNI 56
ME+ E E+ E +L VQ A++++ PS D LD DF++V+YIN+LFPTEQSL+NI
Sbjct: 2 MEEEELEFVEELEAVLQLTPDVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLANI 61
Query: 57 DDVIMKMESNIKEMDEEIETVVRSQSGVGQDGKKALEDSQKVIMQLFSQVRDIKSKAEKS 116
D+V+ K+ I+ +D+ I TVVR Q+ VGQDG++ALE++QK I QLF +++DIK KAEKS
Sbjct: 62 DEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEKS 121
Query: 117 EEMVREITRDIKLLDTAKRNLTTAITCLNHLHMLVTGVHSLRTLIEQRQYGEIVMPLQGV 176
E+MV+EITRDIK LD AKR+LTT+IT LNHLHML GV SL + +RQYGE+ LQGV
Sbjct: 122 EQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQGV 181
Query: 177 IEVMKHFQDSTDIPQILELRSQVAQIQNTLSEQITQDLKNAFQNPSSGSFVP---SKQIA 233
+ V++HF IPQI +L +V Q L +QI D + AF PS G+ P S +
Sbjct: 182 MNVLEHFHKYMGIPQIRQLSERVKAAQTELGQQILADFEEAF--PSQGTKRPGGPSNVLR 239
Query: 234 EALRVVSILDPKVKKNILEWFISLQLSEYLVLFDESEDSAWLDKIDKRYAWFKKQLLHVE 293
+A +V +ILDP++K+ I++ FI LSEYLVLF E++D AWLDKID+RYAW K+QL+ E
Sbjct: 240 DACQVANILDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYE 299
Query: 294 DKFGTLFPPHWQLSEKITLEFCERTRSELGKIMSKRKFEIDVKLLLYAIQKTSNFEQLLE 353
+K+G +FP W ++E+I +EFC TR+EL KIM R EI+VKLLL+AIQ+T+NFE L
Sbjct: 300 EKYGRMFPREWYMAERIAVEFCHITRTELAKIMRTRAKEIEVKLLLFAIQRTTNFEGFLA 359
Query: 354 KRFA 357
KRF+
Sbjct: 360 KRFS 363
Score = 50 (22.7 bits), Expect = 1.5e-123, Sum P(2) = 1.5e-123
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 244 PKVKKNILEWFISLQLSEYLVLFDESEDSAWLDKIDKRYAWFKKQ 288
PK N +S +L ++ ES+D + ID+ A FK Q
Sbjct: 410 PKAPDNPFHGIVSKCFEPHLYVYIESQDKNLGELIDRFVADFKAQ 454
>MGI|MGI:1915549 [details] [associations]
symbol:Vps53 "vacuolar protein sorting 53 (yeast)"
species:10090 "Mus musculus" [GO:0000938 "GARP complex"
evidence=ISO] [GO:0005768 "endosome" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] MGI:MGI:1915549 Pfam:PF04100
GO:GO:0005794 GO:GO:0015031 GO:GO:0010008 EMBL:AL591129
eggNOG:NOG327715 GeneTree:ENSGT00390000015165 HOGENOM:HOG000265899
OMA:KFINHLF InterPro:IPR007234 CTD:55275 HOVERGEN:HBG092351
OrthoDB:EOG4894KW EMBL:AK009970 EMBL:AK019408 EMBL:AK033495
EMBL:AK049259 EMBL:BC034371 IPI:IPI00229808 IPI:IPI00387427
RefSeq:NP_080940.2 UniGene:Mm.46397 ProteinModelPortal:Q8CCB4
STRING:Q8CCB4 PhosphoSite:Q8CCB4 PaxDb:Q8CCB4 PRIDE:Q8CCB4
Ensembl:ENSMUST00000056601 Ensembl:ENSMUST00000108419 GeneID:68299
KEGG:mmu:68299 UCSC:uc007kfa.1 UCSC:uc011xzq.1 InParanoid:Q8CCB4
NextBio:326953 Bgee:Q8CCB4 CleanEx:MM_VPS53 Genevestigator:Q8CCB4
GermOnline:ENSMUSG00000017288 Uniprot:Q8CCB4
Length = 832
Score = 1180 (420.4 bits), Expect = 6.6e-221, Sum P(2) = 6.6e-221
Identities = 251/456 (55%), Positives = 316/456 (69%)
Query: 343 QKTSNFEQL-LEKRFADDETEGENKTK-----FDGIIGSCFQNYLYIYIESLDRNLSDLI 396
+ T E+L LEK E E K K F GI+ CF+ +LY+YIES D+NLS+LI
Sbjct: 389 ETTPEMEELALEK----GELEQPKKPKAPDNPFHGIVSKCFEPHLYVYIESQDKNLSELI 444
Query: 397 DRFAEDSKQVLNNINETCETSAAPVLPSCADLFMFYKKSLVQCTQLSTGEPMVALATTFQ 456
DRF D K T E A VLPSCADLF++YKK +VQC+QLSTGEPM+AL T FQ
Sbjct: 445 DRFVADFKAQGPPKPNTDEGGA--VLPSCADLFVYYKKCMVQCSQLSTGEPMIALTTIFQ 502
Query: 457 QYLRHYAHKVLQQNVSKQAGQTANTTLASVSNITRDLGLIKDQRTKYTPQEQAKICCVLT 516
+YLR YA K+L N+ K + + T++S+ + G + ++T +E IC +L+
Sbjct: 503 KYLREYAWKILSGNLPKTSSSSGGLTISSL--LKEKEG---SEVARFTLEELCLICSILS 557
Query: 517 TAEYCLETTQQLEQKLKEKVDPNLANKIDLSNEQDVFHNVISSCIQLLVQDLELACEPAL 576
TAEYCL TTQQLE+KLKEKVD +L +I+L+ E D F VISS IQLLVQDL+ AC+PAL
Sbjct: 558 TAEYCLATTQQLEEKLKEKVDVSLTERINLTGEMDTFSTVISSSIQLLVQDLDAACDPAL 617
Query: 577 TAMVKTNWSSVESVGDQSGYVTAITSHLKQSVPLIRTNLSSSRKYFTQFCVKFANSFIPK 636
AM K W +VE VGDQS YVT++ H+KQ+VP+IR NL+S+RKYFTQFC+KFANSFIPK
Sbjct: 618 IAMSKMPWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCIKFANSFIPK 677
Query: 637 LVQHVFKCKPLSTVGAEQLLLDIHMLKTVLLDLPSIGSQVVRKAPASFTKVVVKGMTKAE 696
+ H+FKCKP+S VGAEQLLLD H LK VLLDLPSIGSQVVRKAPAS+TK+VVKGMT+AE
Sbjct: 678 FITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRKAPASYTKIVVKGMTRAE 737
Query: 697 MILKLVMASAEPDICFVEQFCKLLPESDMTEFQRILDMKGLKTNEKNNLINLFR---PKN 753
MILK+VMA EP + FV+ + KLL + + FQ+ILDMKGLK +E+++++ L R P
Sbjct: 738 MILKVVMAPHEPLVVFVDNYIKLLTDCNSETFQKILDMKGLKRSEQSSMLELLRQRLPAP 797
Query: 754 PSNTSSSLVAAXXXXXXXXXXXXXIQKLNNLIKKNL 789
PS T S + I+KL LIKK L
Sbjct: 798 PSGTEGSSTLSLIAPTPEQESSR-IRKLEKLIKKRL 832
Score = 976 (348.6 bits), Expect = 6.6e-221, Sum P(2) = 6.6e-221
Identities = 196/364 (53%), Positives = 263/364 (72%)
Query: 1 MEDTE-EYYNE---ILNYPKSVQDALKEIMPSTDVLDDHDFDSVQYINSLFPTEQSLSNI 56
ME+ E E+ E +L VQ A++++ PS D LD DF++V+YIN+LFPTEQSL+NI
Sbjct: 2 MEEEELEFVEELEAVLQLTPEVQLAIEQVFPSQDPLDQADFNAVEYINTLFPTEQSLANI 61
Query: 57 DDVIMKMESNIKEMDEEIETVVRSQSGVGQDGKKALEDSQKVIMQLFSQVRDIKSKAEKS 116
DDV+ K+ I+ +D+ I TVVR Q+ VGQDG++ALE++QK I QLF +++DIK KAEKS
Sbjct: 62 DDVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEKS 121
Query: 117 EEMVREITRDIKLLDTAKRNLTTAITCLNHLHMLVTGVHSLRTLIEQRQYGEIVMPLQGV 176
E+MV+EITRDIK LD AKR+LTT+IT LNHLHML GV SL + +RQYGE+ LQGV
Sbjct: 122 EQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQGV 181
Query: 177 IEVMKHFQDSTDIPQILELRSQVAQIQNTLSEQITQDLKNAFQNPSSGSFVP---SKQIA 233
+ V++HF IPQI +L +V Q L +QI D + AF PS G+ P S +
Sbjct: 182 MNVLEHFHKYMGIPQIRQLSERVKAAQTELGQQILADFEEAF--PSQGTKRPGGPSNVLR 239
Query: 234 EALRVVSILDPKVKKNILEWFISLQLSEYLVLFDESEDSAWLDKIDKRYAWFKKQLLHVE 293
+A V +ILDP++K+ I++ FI LSEYLVLF E++D AWLDKID+RYAW K+QL+ E
Sbjct: 240 DACLVANILDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWVKRQLVDYE 299
Query: 294 DKFGTLFPPHWQLSEKITLEFCERTRSELGKIMSKRKFEIDVKLLLYAIQKTSNFEQLLE 353
+K+G +FP W ++E+I++EFC TR+EL KIM R EI+VKLLL+AIQ+T+NFE L
Sbjct: 300 EKYGRMFPREWCMTERISVEFCHVTRAELSKIMRARAKEIEVKLLLFAIQRTTNFEGFLA 359
Query: 354 KRFA 357
KRF+
Sbjct: 360 KRFS 363
>UNIPROTKB|F1RHI3 [details] [associations]
symbol:VPS53 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000938 "GARP complex" evidence=IEA] Pfam:PF04100
GeneTree:ENSGT00390000015165 OMA:KFINHLF InterPro:IPR007234
EMBL:CU929257 EMBL:CU928997 RefSeq:XP_003131861.1 UniGene:Ssc.19038
Ensembl:ENSSSCT00000019386 GeneID:100523207 KEGG:ssc:100523207
Uniprot:F1RHI3
Length = 832
Score = 1175 (418.7 bits), Expect = 9.7e-220, Sum P(2) = 9.7e-220
Identities = 240/424 (56%), Positives = 302/424 (71%)
Query: 369 FDGIIGSCFQNYLYIYIESLDRNLSDLIDRFAEDSKQVLNNINETCETSAAPVLPSCADL 428
F GI+ CF+ +LY+YIES D+NL +LIDRF D K + + A VLPSCADL
Sbjct: 417 FHGIVSKCFEPHLYVYIESQDKNLGELIDRFVADFK-AQGPPKPSMDEGGA-VLPSCADL 474
Query: 429 FMFYKKSLVQCTQLSTGEPMVALATTFQQYLRHYAHKVLQQNVSKQAGQTANTTLASVSN 488
F++YKK +VQC+QLSTGEPM+AL T FQ+YL+ YA K+L N+ K + T++S+
Sbjct: 475 FVYYKKCMVQCSQLSTGEPMIALTTIFQKYLQEYAWKILSGNLPKTTSSSGGLTISSL-- 532
Query: 489 ITRDLGLIKDQRTKYTPQEQAKICCVLTTAEYCLETTQQLEQKLKEKVDPNLANKIDLSN 548
+ G + K+T +E IC +L+TAEYCL TTQQLE+KLKEKVD +L +I+LS
Sbjct: 533 LKEKEG---SEVAKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDVSLIERINLSG 589
Query: 549 EQDVFHNVISSCIQLLVQDLELACEPALTAMVKTNWSSVESVGDQSGYVTAITSHLKQSV 608
E D F VISS IQLLVQDL+ AC+PALTAM K W +VE VGDQS YVT++ H+KQ+V
Sbjct: 590 EMDTFSTVISSSIQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNV 649
Query: 609 PLIRTNLSSSRKYFTQFCVKFANSFIPKLVQHVFKCKPLSTVGAEQLLLDIHMLKTVLLD 668
P+IR NL+S+RKYFTQFC+KFANSFIPK + H+FKCKP+S VGAEQLLLD H LK VLLD
Sbjct: 650 PIIRDNLASTRKYFTQFCIKFANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLD 709
Query: 669 LPSIGSQVVRKAPASFTKVVVKGMTKAEMILKLVMASAEPDICFVEQFCKLLPESDMTEF 728
LPSIGSQVVRKAPAS+TK+VVKGMT+AEMILK+VMA EP + FV+ + KLL + + F
Sbjct: 710 LPSIGSQVVRKAPASYTKIVVKGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNTETF 769
Query: 729 QRILDMKGLKTNEKNNLINLFR---PKNPSNTSSSLVAAXXXXXXXXXXXXXIQKLNNLI 785
Q+ILDMKGLK +E+++ + LFR P PS S + I+KL LI
Sbjct: 770 QKILDMKGLKRSEQSSTLELFRQRLPTPPSGPEGSS-SLSLLAPTPEQESSRIRKLEKLI 828
Query: 786 KKNL 789
KK L
Sbjct: 829 KKRL 832
Score = 970 (346.5 bits), Expect = 9.7e-220, Sum P(2) = 9.7e-220
Identities = 194/364 (53%), Positives = 262/364 (71%)
Query: 1 MEDTE-EYYNE---ILNYPKSVQDALKEIMPSTDVLDDHDFDSVQYINSLFPTEQSLSNI 56
ME+ E E+ E +L VQ A++++ PS D LD DF++V+YIN+LFPTEQSL+NI
Sbjct: 2 MEEEELEFVEELEAVLQLTPDVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLANI 61
Query: 57 DDVIMKMESNIKEMDEEIETVVRSQSGVGQDGKKALEDSQKVIMQLFSQVRDIKSKAEKS 116
D+V+ K+ I+ +D+ I TVVR Q+ VGQDG++ALE++QK I QLF +++DIK KAEKS
Sbjct: 62 DEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEKS 121
Query: 117 EEMVREITRDIKLLDTAKRNLTTAITCLNHLHMLVTGVHSLRTLIEQRQYGEIVMPLQGV 176
E+MV+EITRDIK LD AKR+LTT+IT LNHLHML GV SL + +RQYGE+ LQGV
Sbjct: 122 EQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQGV 181
Query: 177 IEVMKHFQDSTDIPQILELRSQVAQIQNTLSEQITQDLKNAFQNPSSGSFVP---SKQIA 233
+ V++HF IPQI +L +V Q L +QI D + AF PS G+ P S +
Sbjct: 182 MNVLEHFHRYMGIPQIRQLSERVKAAQTELGQQILADFEEAF--PSQGTKRPGGPSNVLR 239
Query: 234 EALRVVSILDPKVKKNILEWFISLQLSEYLVLFDESEDSAWLDKIDKRYAWFKKQLLHVE 293
+A + +ILDP++K+ I++ FI LSEYLVLF E++D AWLDKID+RYAW K+QL+ E
Sbjct: 240 DACLIANILDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYE 299
Query: 294 DKFGTLFPPHWQLSEKITLEFCERTRSELGKIMSKRKFEIDVKLLLYAIQKTSNFEQLLE 353
+K+G +FP W ++E+I +EFC TR+EL KIM R EI+VKLLL+AIQ+T+NFE L
Sbjct: 300 EKYGRMFPREWYMAERIAVEFCHITRTELAKIMRTRAKEIEVKLLLFAIQRTTNFEGFLA 359
Query: 354 KRFA 357
KRF+
Sbjct: 360 KRFS 363
Score = 50 (22.7 bits), Expect = 1.7e-122, Sum P(2) = 1.7e-122
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 244 PKVKKNILEWFISLQLSEYLVLFDESEDSAWLDKIDKRYAWFKKQ 288
PK N +S +L ++ ES+D + ID+ A FK Q
Sbjct: 410 PKAPDNPFHGIVSKCFEPHLYVYIESQDKNLGELIDRFVADFKAQ 454
>UNIPROTKB|E2R1D2 [details] [associations]
symbol:VPS53 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0000938 "GARP complex" evidence=IEA]
Pfam:PF04100 GeneTree:ENSGT00390000015165 OMA:KFINHLF
InterPro:IPR007234 CTD:55275 EMBL:AAEX03006688 RefSeq:XP_548308.2
ProteinModelPortal:E2R1D2 Ensembl:ENSCAFT00000030338 GeneID:491188
KEGG:cfa:491188 NextBio:20864069 Uniprot:E2R1D2
Length = 832
Score = 1173 (418.0 bits), Expect = 9.7e-220, Sum P(2) = 9.7e-220
Identities = 241/424 (56%), Positives = 302/424 (71%)
Query: 369 FDGIIGSCFQNYLYIYIESLDRNLSDLIDRFAEDSKQVLNNINETCETSAAPVLPSCADL 428
F GI+ CF+ +LY+YIES D+NL +LIDRF D K T E A VLPSCADL
Sbjct: 417 FHGIVSKCFEPHLYVYIESQDKNLGELIDRFVADFKAQGPPKPNTEEGGA--VLPSCADL 474
Query: 429 FMFYKKSLVQCTQLSTGEPMVALATTFQQYLRHYAHKVLQQNVSKQAGQTANTTLASVSN 488
F++YKK +VQC+QLSTGEPM+AL T FQ+YLR YA K+L N+ K + T++S+
Sbjct: 475 FVYYKKCMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTSSSGGLTISSL-- 532
Query: 489 ITRDLGLIKDQRTKYTPQEQAKICCVLTTAEYCLETTQQLEQKLKEKVDPNLANKIDLSN 548
+ G + K+T +E IC +L+TAEYCL TTQQLE+KLKEKVD +L +I+L+
Sbjct: 533 LKEKEG---SEVAKFTLEELCLICGILSTAEYCLATTQQLEEKLKEKVDVSLIERINLTG 589
Query: 549 EQDVFHNVISSCIQLLVQDLELACEPALTAMVKTNWSSVESVGDQSGYVTAITSHLKQSV 608
E D F VISS IQLLVQDL+ AC+PALTAM K W +VE VGDQS YVT++ H+KQ+V
Sbjct: 590 EMDTFSTVISSSIQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNV 649
Query: 609 PLIRTNLSSSRKYFTQFCVKFANSFIPKLVQHVFKCKPLSTVGAEQLLLDIHMLKTVLLD 668
P+IR NL+S+RKYFTQFC+KFANSFIPK + H+FKCKP+S VGAEQLLLD H LK VLLD
Sbjct: 650 PIIRDNLASTRKYFTQFCIKFANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLD 709
Query: 669 LPSIGSQVVRKAPASFTKVVVKGMTKAEMILKLVMASAEPDICFVEQFCKLLPESDMTEF 728
LPSIGSQVVRKAPAS+TK+VVKGMT+AEMILK+VMA EP + FV+ + KLL + + F
Sbjct: 710 LPSIGSQVVRKAPASYTKIVVKGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNTETF 769
Query: 729 QRILDMKGLKTNEKNNLINLFR---PKNPSNTSSSLVAAXXXXXXXXXXXXXIQKLNNLI 785
Q+ILDMKGLK +E+++++ L R P PS S + I+KL LI
Sbjct: 770 QKILDMKGLKRSEQSSMLELLRQRLPTPPSGPEGSS-SLSLLAPTPEQESSRIRKLEKLI 828
Query: 786 KKNL 789
KK L
Sbjct: 829 KKRL 832
Score = 972 (347.2 bits), Expect = 9.7e-220, Sum P(2) = 9.7e-220
Identities = 195/364 (53%), Positives = 262/364 (71%)
Query: 1 MEDTE-EYYNE---ILNYPKSVQDALKEIMPSTDVLDDHDFDSVQYINSLFPTEQSLSNI 56
ME+ E E+ E +L VQ A++++ PS D LD DF++V+YIN+LFPTEQSL+NI
Sbjct: 2 MEEEELEFVEELEAVLQLTPDVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLANI 61
Query: 57 DDVIMKMESNIKEMDEEIETVVRSQSGVGQDGKKALEDSQKVIMQLFSQVRDIKSKAEKS 116
D+V+ K+ I+ +D+ I TVVR Q+ VGQDG++ALE++QK I QLF +++DIK KAEKS
Sbjct: 62 DEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEKS 121
Query: 117 EEMVREITRDIKLLDTAKRNLTTAITCLNHLHMLVTGVHSLRTLIEQRQYGEIVMPLQGV 176
E+MV+EITRDIK LD AKR+LTT+IT LNHLHML GV SL + +RQYGE+ LQGV
Sbjct: 122 EQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQGV 181
Query: 177 IEVMKHFQDSTDIPQILELRSQVAQIQNTLSEQITQDLKNAFQNPSSGSFVP---SKQIA 233
+ V++HF IPQI +L +V Q L +QI D + AF PS G+ P S +
Sbjct: 182 MNVLEHFHKYMGIPQIRQLSERVKAAQTELGQQILADFEEAF--PSQGTKRPGGPSNVLR 239
Query: 234 EALRVVSILDPKVKKNILEWFISLQLSEYLVLFDESEDSAWLDKIDKRYAWFKKQLLHVE 293
+A V +ILDP++K+ I++ FI LSEYLVLF E++D AWLDKID+RYAW K+QL+ E
Sbjct: 240 DACLVANILDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYE 299
Query: 294 DKFGTLFPPHWQLSEKITLEFCERTRSELGKIMSKRKFEIDVKLLLYAIQKTSNFEQLLE 353
+K+G +FP W ++E+I +EFC TR+EL KIM R EI+VKLLL+AIQ+T+NFE L
Sbjct: 300 EKYGRMFPREWYMTERIAVEFCHVTRTELAKIMRTRAKEIEVKLLLFAIQRTTNFEGFLA 359
Query: 354 KRFA 357
KRF+
Sbjct: 360 KRFS 363
Score = 54 (24.1 bits), Expect = 1.1e-122, Sum P(2) = 1.1e-122
Identities = 21/75 (28%), Positives = 33/75 (44%)
Query: 221 PSSGSFV---PSKQIAEALRVVSILD----PKVKKNILEWFISLQLSEYLVLFDESEDSA 273
PS+ F+ P+ ++ E LD PK N +S +L ++ ES+D
Sbjct: 380 PSTNPFLEDEPAPEMEELTMEKGDLDQPKKPKAPDNPFHGIVSKCFEPHLYVYIESQDKN 439
Query: 274 WLDKIDKRYAWFKKQ 288
+ ID+ A FK Q
Sbjct: 440 LGELIDRFVADFKAQ 454
Score = 38 (18.4 bits), Expect = 8.6e-100, Sum P(2) = 8.6e-100
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 733 DMKGLKTNEKNNLINLFRPKNPSNTSSSLVA 763
+M+ L T EK +L +PK P N +V+
Sbjct: 393 EMEEL-TMEKGDLDQPKKPKAPDNPFHGIVS 422
>ZFIN|ZDB-GENE-041114-199 [details] [associations]
symbol:vps53 "vacuolar protein sorting 53 homolog
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
Pfam:PF04100 ZFIN:ZDB-GENE-041114-199 EMBL:BX908796
GeneTree:ENSGT00390000015165 InterPro:IPR007234 IPI:IPI00994476
Ensembl:ENSDART00000122184 ArrayExpress:E7FAG0 Bgee:E7FAG0
Uniprot:E7FAG0
Length = 832
Score = 1179 (420.1 bits), Expect = 1.2e-219, Sum P(2) = 1.2e-219
Identities = 244/455 (53%), Positives = 317/455 (69%)
Query: 342 IQKTSNFEQLLEKRFADDETEGENKTK-----FDGIIGSCFQNYLYIYIESLDRNLSDLI 396
++ S + + EK D++ + K K F GI+ CF+ +LY+YIES D+NL +LI
Sbjct: 387 LEDESGEDNVSEK---DEDLDRPKKPKAPDNPFHGIVSKCFEPHLYVYIESQDKNLGELI 443
Query: 397 DRFAEDSKQVLNNINETCETSAAPVLPSCADLFMFYKKSLVQCTQLSTGEPMVALATTFQ 456
DRF D + + T E A VLPSCADLF++YKK +VQC+QLSTGEPM+AL T FQ
Sbjct: 444 DRFVADFRAQGPPKSGTDEGGA--VLPSCADLFVYYKKCMVQCSQLSTGEPMIALTTIFQ 501
Query: 457 QYLRHYAHKVLQQNVSKQAGQTANTTLASVSNITRDLGLIKDQRTKYTPQEQAKICCVLT 516
+YLR YA K+L N+ K + + T++S+ + G + K+T +E IC +L+
Sbjct: 502 KYLREYAWKILSGNLPKTSTNSGGLTISSL--LKEKEG---SEVAKFTVEELCLICSILS 556
Query: 517 TAEYCLETTQQLEQKLKEKVDPNLANKIDLSNEQDVFHNVISSCIQLLVQDLELACEPAL 576
TAEYCL TT QLE+KLKEKVD +L +I+LS E D F VIS+ IQLLVQDL+ AC+PAL
Sbjct: 557 TAEYCLATTLQLEEKLKEKVDKSLMERINLSGEMDTFSTVISNSIQLLVQDLDAACDPAL 616
Query: 577 TAMVKTNWSSVESVGDQSGYVTAITSHLKQSVPLIRTNLSSSRKYFTQFCVKFANSFIPK 636
TAM K W SVE VGDQS YVT++ H+KQ+VP+IR NL+S+RKYFTQFC+KF NSFIPK
Sbjct: 617 TAMSKMPWQSVEHVGDQSPYVTSVIMHIKQNVPIIRDNLASTRKYFTQFCIKFTNSFIPK 676
Query: 637 LVQHVFKCKPLSTVGAEQLLLDIHMLKTVLLDLPSIGSQVVRKAPASFTKVVVKGMTKAE 696
+ H+F+CKP+S VGAEQLLLD H LKTVLLDLPSIGSQVVRKAPAS+TK+VVKGMT+AE
Sbjct: 677 FINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVVRKAPASYTKIVVKGMTRAE 736
Query: 697 MILKLVMASAEPDICFVEQFCKLLPESDMTEFQRILDMKGLKTNEKNNLINLFRPKNPSN 756
MILK+VMA EP + FV+ + KLL +S+ FQ+ILDMKGLK +E++ ++ LFR + P+
Sbjct: 737 MILKVVMAPHEPSVVFVDNYIKLLADSNPETFQKILDMKGLKRSEQSTMLELFRQRLPTP 796
Query: 757 TSS--SLVAAXXXXXXXXXXXXXIQKLNNLIKKNL 789
S + I+KL LIKK +
Sbjct: 797 PSGPDGGPSLSFSAPTPEQESSRIRKLEKLIKKRI 831
Score = 965 (344.8 bits), Expect = 1.2e-219, Sum P(2) = 1.2e-219
Identities = 193/364 (53%), Positives = 264/364 (72%)
Query: 1 MEDTE-EYYNE---ILNYPKSVQDALKEIMPSTDVLDDHDFDSVQYINSLFPTEQSLSNI 56
MED E E+ + IL+ VQ A++++ PS D LD DF++V+YIN+LFPTEQSL+NI
Sbjct: 2 MEDEELEFVEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLANI 61
Query: 57 DDVIMKMESNIKEMDEEIETVVRSQSGVGQDGKKALEDSQKVIMQLFSQVRDIKSKAEKS 116
D+V+ + I+++D+ I TVVR Q+ VGQDG++ALE++QK I QLF +++DIK KAEKS
Sbjct: 62 DEVVNNIRLKIRKLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEKS 121
Query: 117 EEMVREITRDIKLLDTAKRNLTTAITCLNHLHMLVTGVHSLRTLIEQRQYGEIVMPLQGV 176
E+MV+EITRDIK LD AKR+LTT+IT LNHLHML GV SL + +RQYGE+ LQGV
Sbjct: 122 EQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQGV 181
Query: 177 IEVMKHFQDSTDIPQILELRSQVAQIQNTLSEQITQDLKNAFQNPSSGSFV---PSKQIA 233
+ V++HFQ IPQI +L +V Q+ L QI D + F P+ GS PS +
Sbjct: 182 VNVLEHFQKYMGIPQIRQLSERVKAAQSELGTQILADFEETF--PAQGSKKSGGPSIVLR 239
Query: 234 EALRVVSILDPKVKKNILEWFISLQLSEYLVLFDESEDSAWLDKIDKRYAWFKKQLLHVE 293
+A V ++LDP++K+ I++ FI LSEY+VLF E++D AWLDKID+RYAW K+QL+ E
Sbjct: 240 DACLVANVLDPRIKQEIIKKFIRQHLSEYMVLFQENQDVAWLDKIDRRYAWIKRQLVDYE 299
Query: 294 DKFGTLFPPHWQLSEKITLEFCERTRSELGKIMSKRKFEIDVKLLLYAIQKTSNFEQLLE 353
+K+G +FP W ++E+I +EFC TR+EL K+M R EI+VKLLL+AIQ+T+NFE LL
Sbjct: 300 EKYGRMFPEEWCMTERIAVEFCHITRTELTKLMRTRAREIEVKLLLFAIQRTTNFEGLLA 359
Query: 354 KRFA 357
KRF+
Sbjct: 360 KRFS 363
>UNIPROTKB|Q5VIR6 [details] [associations]
symbol:VPS53 "Vacuolar protein sorting-associated protein
53 homolog" species:9606 "Homo sapiens" [GO:0015031 "protein
transport" evidence=IEA] [GO:0010008 "endosome membrane"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000938 "GARP complex" evidence=IDA] Pfam:PF04100 EMBL:CH471108
GO:GO:0015031 GO:GO:0010008 GO:GO:0000938 eggNOG:NOG327715
HOGENOM:HOG000265899 OMA:KFINHLF InterPro:IPR007234 CTD:55275
HOVERGEN:HBG092351 OrthoDB:EOG4894KW EMBL:AY444797 EMBL:AF246287
EMBL:EU021218 EMBL:AK001841 EMBL:AK290343 EMBL:AC015853
EMBL:AC027455 EMBL:BC006116 EMBL:AF318335 IPI:IPI00181824
IPI:IPI00656021 IPI:IPI00847977 RefSeq:NP_001121631.1
RefSeq:NP_060759.2 UniGene:Hs.461819 ProteinModelPortal:Q5VIR6
DIP:DIP-59352N IntAct:Q5VIR6 STRING:Q5VIR6 PhosphoSite:Q5VIR6
DMDM:74746777 PaxDb:Q5VIR6 PRIDE:Q5VIR6 Ensembl:ENST00000291074
Ensembl:ENST00000437048 Ensembl:ENST00000571805 GeneID:55275
KEGG:hsa:55275 UCSC:uc002frm.2 UCSC:uc002frn.2
GeneCards:GC17M000381 H-InvDB:HIX0013386 HGNC:HGNC:25608
HPA:HPA022988 HPA:HPA024446 neXtProt:NX_Q5VIR6 PharmGKB:PA142670618
InParanoid:Q5VIR6 ChiTaRS:VPS53 GenomeRNAi:55275 NextBio:59405
ArrayExpress:Q5VIR6 Bgee:Q5VIR6 CleanEx:HS_VPS53
Genevestigator:Q5VIR6 GermOnline:ENSG00000141252 Uniprot:Q5VIR6
Length = 699
Score = 970 (346.5 bits), Expect = 2.0e-184, Sum P(2) = 2.0e-184
Identities = 195/364 (53%), Positives = 262/364 (71%)
Query: 1 MEDTE-EYYNE---ILNYPKSVQDALKEIMPSTDVLDDHDFDSVQYINSLFPTEQSLSNI 56
ME+ E E+ E +L VQ A++++ PS D LD DF++V+YIN+LFPTEQSL+NI
Sbjct: 2 MEEEELEFVEELEAVLQLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLANI 61
Query: 57 DDVIMKMESNIKEMDEEIETVVRSQSGVGQDGKKALEDSQKVIMQLFSQVRDIKSKAEKS 116
D+V+ K+ I+ +D+ I TVVR Q+ VGQDG++ALE++QK I QLF +++DIK KAEKS
Sbjct: 62 DEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEKS 121
Query: 117 EEMVREITRDIKLLDTAKRNLTTAITCLNHLHMLVTGVHSLRTLIEQRQYGEIVMPLQGV 176
E+MV+EITRDIK LD AKR+LTT+IT LNHLHML GV SL + +RQYGE+ LQGV
Sbjct: 122 EQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQGV 181
Query: 177 IEVMKHFQDSTDIPQILELRSQVAQIQNTLSEQITQDLKNAFQNPSSGSFVP---SKQIA 233
+ V++HF IPQI +L +V Q L +QI D + AF PS G+ P S +
Sbjct: 182 MNVLEHFHKYMGIPQIRQLSERVKAAQTELGQQILADFEEAF--PSQGTKRPGGPSNVLR 239
Query: 234 EALRVVSILDPKVKKNILEWFISLQLSEYLVLFDESEDSAWLDKIDKRYAWFKKQLLHVE 293
+A V +ILDP++K+ I++ FI LSEYLVLF E++D AWLDKID+RYAW K+QL+ E
Sbjct: 240 DACLVANILDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYE 299
Query: 294 DKFGTLFPPHWQLSEKITLEFCERTRSELGKIMSKRKFEIDVKLLLYAIQKTSNFEQLLE 353
+K+G +FP W ++E+I +EFC TR+EL KIM R EI+VKLLL+AIQ+T+NFE L
Sbjct: 300 EKYGRMFPREWCMAERIAVEFCHVTRAELAKIMRTRAKEIEVKLLLFAIQRTTNFEGFLA 359
Query: 354 KRFA 357
KRF+
Sbjct: 360 KRFS 363
Score = 841 (301.1 bits), Expect = 2.0e-184, Sum P(2) = 2.0e-184
Identities = 173/315 (54%), Positives = 220/315 (69%)
Query: 343 QKTSNFEQLL-EKRFADDETEGENKTK-FDGIIGSCFQNYLYIYIESLDRNLSDLIDRFA 400
+ T E+L EK D + + F GI+ CF+ +LY+YIES D+NL +LIDRF
Sbjct: 389 EPTPEMEELATEKGDLDQPKKPKAPDNPFHGIVSKCFEPHLYVYIESQDKNLGELIDRFV 448
Query: 401 EDSKQVLNNINETCETSAAPVLPSCADLFMFYKKSLVQCTQLSTGEPMVALATTFQQYLR 460
D K T E A VLPSCADLF++YKK +VQC+QLSTGEPM+AL T FQ+YLR
Sbjct: 449 ADFKAQGPPKPNTDEGGA--VLPSCADLFVYYKKCMVQCSQLSTGEPMIALTTIFQKYLR 506
Query: 461 HYAHKVLQQNVSKQAGQTANTTLASVSNITRDLGLIKDQRTKYTPQEQAKICCVLTTAEY 520
YA K+L N+ K + T++S+ + G + K+T +E IC +L+TAEY
Sbjct: 507 EYAWKILSGNLPKTTTSSGGLTISSL--LKEKEG---SEVAKFTLEELCLICNILSTAEY 561
Query: 521 CLETTQQLEQKLKEKVDPNLANKIDLSNEQDVFHNVISSCIQLLVQDLELACEPALTAMV 580
CL TTQQLE+KLKEKVD +L +I+L+ E D F VISS IQLLVQDL+ AC+PALTAM
Sbjct: 562 CLATTQQLEEKLKEKVDVSLIERINLTGEMDTFSTVISSSIQLLVQDLDAACDPALTAMS 621
Query: 581 KTNWSSVESVGDQSGYVTAITSHLKQSVPLIRTNLSSSRKYFTQFCVKFANSFIPKLVQH 640
K W +VE VGDQS YVT++ H+KQ+VP+IR NL+S+RKYFTQFCVKFANSFIPK + H
Sbjct: 622 KMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCVKFANSFIPKFITH 681
Query: 641 VFKCKPLSTVGAEQL 655
+FKCKP+S VGAEQ+
Sbjct: 682 LFKCKPISMVGAEQV 696
Score = 39 (18.8 bits), Expect = 1.1e-99, Sum P(2) = 1.1e-99
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 733 DMKGLKTNEKNNLINLFRPKNPSNTSSSLVA 763
+M+ L T EK +L +PK P N +V+
Sbjct: 393 EMEELAT-EKGDLDQPKKPKAPDNPFHGIVS 422
>DICTYBASE|DDB_G0285901 [details] [associations]
symbol:DDB_G0285901 "Vps53-like domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0044351 "macropinocytosis" evidence=RCA] dictyBase:DDB_G0285901
Pfam:PF04100 EMBL:AAFI02000082 eggNOG:NOG327715 OMA:KFINHLF
InterPro:IPR007234 RefSeq:XP_637994.1 PRIDE:Q54MJ6
EnsemblProtists:DDB0233070 GeneID:8625345 KEGG:ddi:DDB_G0285901
InParanoid:Q54MJ6 ProtClustDB:CLSZ2846701 Uniprot:Q54MJ6
Length = 838
Score = 628 (226.1 bits), Expect = 7.3e-111, Sum P(3) = 7.3e-111
Identities = 134/365 (36%), Positives = 222/365 (60%)
Query: 6 EYYNEILNYPKSVQDALKEIMPSTDV-LDDHDFDSVQYINSLFPTEQSLSNIDDVIMKME 64
E+ N++ + P+ +Q A+++I+P TD D HDF+ V YIN F EQSL+ +D+ + +++
Sbjct: 13 EWTNDMFS-PE-LQAAIRDIVPVTDRDFDKHDFNPVAYINDNFSNEQSLTRLDNFMNRLK 70
Query: 65 SNIKEMDEEIETVVRSQSGVGQDGKKALEDSQKVIMQLFSQVRDIKSKAEKSEEMVREIT 124
I ++DEEI VR QS G GK+ LE++++ I +L +++ DIKSKA +SE+MV EI
Sbjct: 71 LKIIKIDEEIIQEVRLQSISGGKGKEDLENAKRSINELLTKITDIKSKANQSEQMVTEIC 130
Query: 125 RDIKLLDTAKRNLTTAITCLNHLHMLVTGVHSLRTLIEQRQYGEIVMPLQGVIEVMKHFQ 184
+DIK LD AK+NLTTAIT L LHM+V GV L+ +++++QYG + L+ + + F+
Sbjct: 131 KDIKSLDYAKKNLTTAITTLKRLHMMVMGVEQLKEMVDKKQYGTVAKLLEATAQFAEGFK 190
Query: 185 DSTDIPQILELRSQVAQIQNTLSEQITQDLKNAFQNPSSGSFVPSKQIA--EALRVVSIL 242
D + P+I L ++ I++ + +QI +D N + +S P+++ + V+ L
Sbjct: 191 DYRESPKIYALNKELDNIRSRVKDQIYEDF-NQYVPYTSNQIKPNEENRWKSSCYVIDAL 249
Query: 243 DPKVKKNILEWFISLQLSEYLVLFDESEDSAWLDKIDKRYAWFKKQLLHVEDKFGTLFPP 302
+VKK+ L WF QLS Y F +S LD D+R+ W+ +Q+ +++ +FPP
Sbjct: 250 GSEVKKDFLRWFCGSQLSSYKKAFGSQSESYTLDSTDRRFGWWSRQIKIFREEYALVFPP 309
Query: 303 HWQLSEKITLEFCERTRSELGKIMSKRKFEIDVKLLLYAIQKTSNFEQLLEKRFADDETE 362
W + E+I+ EFC TR +L +++ K I+V L+ A++KT FE L + FA + +
Sbjct: 310 EWCMEEQISYEFCILTRLDLSEVLLINKNSIEVPQLIKALKKTLTFENKLYELFAQNNQK 369
Query: 363 GENKT 367
+ T
Sbjct: 370 LSSPT 374
Score = 364 (133.2 bits), Expect = 7.3e-111, Sum P(3) = 7.3e-111
Identities = 82/238 (34%), Positives = 135/238 (56%)
Query: 506 QEQAKICCVLTTAEYCLETTQQLEQKLKEKVDPNLANKIDLSNEQDVFHNVISSCIQLLV 565
QE IC ++ TAE+C +T+ Q+ K+ +D IDL + Q+ F ++I+ ++ LV
Sbjct: 582 QEDKTICLIINTAEFCRKTSGQMTDGFKKIIDEKYKESIDLKDIQNDFSSIIAKGVKALV 641
Query: 566 QDLELACEPALTAMVKTNWSS-VESVGDQSGYVTAITSHLKQSVPLIRTNLSSSRKYFTQ 624
+E +P L +M + W + VGD S YV + + S L LS ++F
Sbjct: 642 SGIEAKLDPHLQSMTRMEWGERYQYVGDNSPYVNEVVQIISDSSQLEVAWLSP--EHFRY 699
Query: 625 FCVKFANSFIPKLVQHVFKCKPLSTVGAEQLLLDIHMLKTVLLDLPSIGSQVVRKAPASF 684
FC FA+SF ++ Q ++KC+ +S +G++ +LLDI +KTVLLDLP+ ++ + +
Sbjct: 700 FCDLFASSFGLRIPQSIYKCRGISEIGSQGILLDITTIKTVLLDLPNKVKD--GRSNSRY 757
Query: 685 TKVVVKGMTKAEMILKLVMASAEPDICFVEQFCKLLPESDMTEFQRILDMKGLKTNEK 742
TK++ K KAE +LK++ S + VE F L P+S +FQ+I+D+KG K +K
Sbjct: 758 TKLLNKEFAKAENLLKVIGCSQDH---LVETFKDLFPDSTNADFQKIMDLKGFKVGDK 812
Score = 137 (53.3 bits), Expect = 7.3e-111, Sum P(3) = 7.3e-111
Identities = 31/110 (28%), Positives = 56/110 (50%)
Query: 368 KFDGIIGSCFQNYLYIYIESLDRNLSDLIDRFAEDSKQVLNNINETCETSAAPVLPSCAD 427
+F GII S F Y+ +YI D+ + +++++ + K L+ + A +L SC D
Sbjct: 475 RFKGIISSSFDPYMDLYINEEDKLIGEVLEKVMAEEKWTLS------DEEANKILTSCTD 528
Query: 428 LFMFYKKSLVQCTQLSTGEPMVALATTFQQYLRHYAHKVLQQNVSKQAGQ 477
L + K +C +L+ GEP L F++YL YA+ ++ + G+
Sbjct: 529 LVFHFIKVRNRCAELTKGEPFFNLYHLFRKYLTQYAN-IISGKIHTDVGR 577
>WB|WBGene00011502 [details] [associations]
symbol:vps-53 species:6239 "Caenorhabditis elegans"
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0000938 "GARP complex" evidence=IPI] Pfam:PF04100
GO:GO:0010008 GO:GO:0040015 GO:GO:0060378 EMBL:Z27079 GO:GO:0000938
PIR:D88564 PIR:S41008 RefSeq:NP_001255027.1 RefSeq:NP_001255028.1
ProteinModelPortal:P34561 PaxDb:P34561 PRIDE:P34561
EnsemblMetazoa:T05G5.8a.1 EnsemblMetazoa:T05G5.8a.2
EnsemblMetazoa:T05G5.8a.3 GeneID:176377 KEGG:cel:CELE_T05G5.8
UCSC:T05G5.8.2 CTD:176377 WormBase:T05G5.8a WormBase:T05G5.8b
eggNOG:NOG327715 GeneTree:ENSGT00390000015165 HOGENOM:HOG000265899
InParanoid:P34561 OMA:KFINHLF NextBio:892314 InterPro:IPR007234
Uniprot:P34561
Length = 798
Score = 979 (349.7 bits), Expect = 1.3e-98, P = 1.3e-98
Identities = 242/748 (32%), Positives = 406/748 (54%)
Query: 24 EIMPSTDVLDD-HDFDSVQYINSLFPTEQSLSNIDDVIMKMESNIKEMDEEIETVVRSQS 82
E+ S +V+++ D +Y P ++ I++ + E ++ ++D I +V +
Sbjct: 8 ELKLSDNVMNEISDMCITEYCK---PNMSLMAQINE-LFPTEQSLTQLDSIIASV---EG 60
Query: 83 GVGQ-DGKKA--LEDSQKVIM---QLFSQVRDIKSKAEKSEEMVREITRDI-KLLDTAKR 135
+G+ D + A +E + V + +D + EKS +RE T+ +++ R
Sbjct: 61 EIGELDNELAYLVETNANVSERGEEALKHAQDAMIELEKSIGSIRERTKSSDEIVREMTR 120
Query: 136 NLTTAITCLNHLHMLVTGVHSLRTLIEQRQYGEIVMPLQGVIEVMKHFQDSTDIPQILEL 195
++ +L +T +H L L+ + + + + + ++ Q+ +
Sbjct: 121 DIKQLDIAKRNLTASITTLHHLHILLTGVESLGAWVDKKDYSSIARQLPAILNVLQLFDA 180
Query: 196 RSQVAQIQNT------LSEQITQDLKNAFQNP-SSGSFVPSKQIAEALRVVSILDPKVKK 248
+ QI N L +T L +N +G S +I + RV + L+ VK+
Sbjct: 181 YKESDQIANLSGQLDKLKASLTIQLAKDLKNAFQTGQL--SDRITDMCRVAAALEGNVKE 238
Query: 249 NILEWFISLQLSEYLVLFDESEDSAWLDKIDKRYAWFKKQLLHVEDK-FGTLFPPHWQLS 307
N ++WFI QLSEY++++ ++E+ AWLDK+D RY WF ++L E +FP W +
Sbjct: 239 NFVKWFIEQQLSEYVIIYADNEEGAWLDKVDDRYKWFVRKLTDFERAGLSNIFPADWHMG 298
Query: 308 EKITLEFCERTRSELGKIMSKRKFEIDVKLLLYAIQKTSNFEQLLEKRFADDETEGENKT 367
++T EFC TR L +IM++R+ ++D KLL +AIQ T FE LL KRF E +G
Sbjct: 299 RRLTSEFCTVTRDILYRIMTRRRQDLDWKLLGHAIQHTKMFEALLTKRFP--EKDG---I 353
Query: 368 KFDGIIGSCFQNYLYIYIESLDRNLSDLIDRFAEDSKQVLNNINETCETSAAPVLPSCAD 427
F+ I S F +L ++I + ++ L++ +D A + + T A P PS AD
Sbjct: 354 SFEKAIWSVFDTFLDVFINAQEKTLNEFLDTCASKIRSGEEKPSRESSTHAVP-FPSSAD 412
Query: 428 LFMFYKKSLVQCTQLSTGEPMVALATTF---QQYLRHYAHKVLQQNVSKQAGQTANTTLA 484
+F+ KK + + ++LS+ EP + + LR YA L + Q + A
Sbjct: 413 MFLLLKKVITESSKLSS-EPDALIRDVIGVVRVCLRGYATSCLVAFLPSLGSQQSGA--A 469
Query: 485 SVSNITRDLGLIKDQRTKYTPQEQAKICCVLTTAEYCLETTQQLEQKLKEKVDPNLANKI 544
++ ++ R+ + + TP +Q +CC+L TA++C ET+ QL++KL +++ P +
Sbjct: 470 NLFSLIRE----EIAYPRLTPDQQFLVCCILATADWCAETSIQLQEKLSQRI-PG----V 520
Query: 545 DLSNEQDVFHNVISSCIQLLVQDLELACEPALTAMVKTNWSSVESVGDQSGYVTAITSHL 604
D+S E + F+++ + +Q+LVQD+E C+ AL ++ K NW++V+ VGD+S ++ ++ +HL
Sbjct: 521 DISQETEAFYSITNQSLQVLVQDVESTCDAALQSISKVNWTAVDCVGDESPFIGSMRAHL 580
Query: 605 KQSVPLIRTNLSSSRKYFTQFCVKFANSFIPKLVQHVFKCKPLSTVGAEQLLLDIHMLKT 664
+Q+VPLIR LS RKYF FC+K A K V +F+C+ +ST GAEQLLL+ H LKT
Sbjct: 581 RQAVPLIRDMLSDRRKYFAHFCLKLATQLAHKFVGSLFRCRTISTHGAEQLLLETHSLKT 640
Query: 665 VLLDLPSIGSQVVRKAPASFTKVVVKGMTKAEMILKLVMASAEPDICFVEQFCKLLPESD 724
LL +PSI S + K P ++ V +TKAEMILK+VM S E FVEQ+ KLLP SD
Sbjct: 641 FLLSVPSIDSIINSKPPTAYVTSVNAALTKAEMILKVVMCSLETVDEFVEQYIKLLPASD 700
Query: 725 MTEFQRILDMKGLKTNEKNNLINLFRPK 752
E Q++L+MKG+K E + ++N +R K
Sbjct: 701 AAEMQKVLEMKGVKRQEHSAVLNAYRLK 728
>UNIPROTKB|P34561 [details] [associations]
symbol:vps-53 "Vacuolar protein sorting-associated protein
53 homolog" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] [GO:0000938 "GARP complex"
evidence=IDA] [GO:0060378 "regulation of brood size" evidence=IMP]
Pfam:PF04100 GO:GO:0010008 GO:GO:0040015 GO:GO:0060378 EMBL:Z27079
GO:GO:0000938 PIR:D88564 PIR:S41008 RefSeq:NP_001255027.1
RefSeq:NP_001255028.1 ProteinModelPortal:P34561 PaxDb:P34561
PRIDE:P34561 EnsemblMetazoa:T05G5.8a.1 EnsemblMetazoa:T05G5.8a.2
EnsemblMetazoa:T05G5.8a.3 GeneID:176377 KEGG:cel:CELE_T05G5.8
UCSC:T05G5.8.2 CTD:176377 WormBase:T05G5.8a WormBase:T05G5.8b
eggNOG:NOG327715 GeneTree:ENSGT00390000015165 HOGENOM:HOG000265899
InParanoid:P34561 OMA:KFINHLF NextBio:892314 InterPro:IPR007234
Uniprot:P34561
Length = 798
Score = 979 (349.7 bits), Expect = 1.3e-98, P = 1.3e-98
Identities = 242/748 (32%), Positives = 406/748 (54%)
Query: 24 EIMPSTDVLDD-HDFDSVQYINSLFPTEQSLSNIDDVIMKMESNIKEMDEEIETVVRSQS 82
E+ S +V+++ D +Y P ++ I++ + E ++ ++D I +V +
Sbjct: 8 ELKLSDNVMNEISDMCITEYCK---PNMSLMAQINE-LFPTEQSLTQLDSIIASV---EG 60
Query: 83 GVGQ-DGKKA--LEDSQKVIM---QLFSQVRDIKSKAEKSEEMVREITRDI-KLLDTAKR 135
+G+ D + A +E + V + +D + EKS +RE T+ +++ R
Sbjct: 61 EIGELDNELAYLVETNANVSERGEEALKHAQDAMIELEKSIGSIRERTKSSDEIVREMTR 120
Query: 136 NLTTAITCLNHLHMLVTGVHSLRTLIEQRQYGEIVMPLQGVIEVMKHFQDSTDIPQILEL 195
++ +L +T +H L L+ + + + + + ++ Q+ +
Sbjct: 121 DIKQLDIAKRNLTASITTLHHLHILLTGVESLGAWVDKKDYSSIARQLPAILNVLQLFDA 180
Query: 196 RSQVAQIQNT------LSEQITQDLKNAFQNP-SSGSFVPSKQIAEALRVVSILDPKVKK 248
+ QI N L +T L +N +G S +I + RV + L+ VK+
Sbjct: 181 YKESDQIANLSGQLDKLKASLTIQLAKDLKNAFQTGQL--SDRITDMCRVAAALEGNVKE 238
Query: 249 NILEWFISLQLSEYLVLFDESEDSAWLDKIDKRYAWFKKQLLHVEDK-FGTLFPPHWQLS 307
N ++WFI QLSEY++++ ++E+ AWLDK+D RY WF ++L E +FP W +
Sbjct: 239 NFVKWFIEQQLSEYVIIYADNEEGAWLDKVDDRYKWFVRKLTDFERAGLSNIFPADWHMG 298
Query: 308 EKITLEFCERTRSELGKIMSKRKFEIDVKLLLYAIQKTSNFEQLLEKRFADDETEGENKT 367
++T EFC TR L +IM++R+ ++D KLL +AIQ T FE LL KRF E +G
Sbjct: 299 RRLTSEFCTVTRDILYRIMTRRRQDLDWKLLGHAIQHTKMFEALLTKRFP--EKDG---I 353
Query: 368 KFDGIIGSCFQNYLYIYIESLDRNLSDLIDRFAEDSKQVLNNINETCETSAAPVLPSCAD 427
F+ I S F +L ++I + ++ L++ +D A + + T A P PS AD
Sbjct: 354 SFEKAIWSVFDTFLDVFINAQEKTLNEFLDTCASKIRSGEEKPSRESSTHAVP-FPSSAD 412
Query: 428 LFMFYKKSLVQCTQLSTGEPMVALATTF---QQYLRHYAHKVLQQNVSKQAGQTANTTLA 484
+F+ KK + + ++LS+ EP + + LR YA L + Q + A
Sbjct: 413 MFLLLKKVITESSKLSS-EPDALIRDVIGVVRVCLRGYATSCLVAFLPSLGSQQSGA--A 469
Query: 485 SVSNITRDLGLIKDQRTKYTPQEQAKICCVLTTAEYCLETTQQLEQKLKEKVDPNLANKI 544
++ ++ R+ + + TP +Q +CC+L TA++C ET+ QL++KL +++ P +
Sbjct: 470 NLFSLIRE----EIAYPRLTPDQQFLVCCILATADWCAETSIQLQEKLSQRI-PG----V 520
Query: 545 DLSNEQDVFHNVISSCIQLLVQDLELACEPALTAMVKTNWSSVESVGDQSGYVTAITSHL 604
D+S E + F+++ + +Q+LVQD+E C+ AL ++ K NW++V+ VGD+S ++ ++ +HL
Sbjct: 521 DISQETEAFYSITNQSLQVLVQDVESTCDAALQSISKVNWTAVDCVGDESPFIGSMRAHL 580
Query: 605 KQSVPLIRTNLSSSRKYFTQFCVKFANSFIPKLVQHVFKCKPLSTVGAEQLLLDIHMLKT 664
+Q+VPLIR LS RKYF FC+K A K V +F+C+ +ST GAEQLLL+ H LKT
Sbjct: 581 RQAVPLIRDMLSDRRKYFAHFCLKLATQLAHKFVGSLFRCRTISTHGAEQLLLETHSLKT 640
Query: 665 VLLDLPSIGSQVVRKAPASFTKVVVKGMTKAEMILKLVMASAEPDICFVEQFCKLLPESD 724
LL +PSI S + K P ++ V +TKAEMILK+VM S E FVEQ+ KLLP SD
Sbjct: 641 FLLSVPSIDSIINSKPPTAYVTSVNAALTKAEMILKVVMCSLETVDEFVEQYIKLLPASD 700
Query: 725 MTEFQRILDMKGLKTNEKNNLINLFRPK 752
E Q++L+MKG+K E + ++N +R K
Sbjct: 701 AAEMQKVLEMKGVKRQEHSAVLNAYRLK 728
>POMBASE|SPAC3A12.15 [details] [associations]
symbol:vps53 "GARP complex subunit Vps53 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000938 "GARP complex"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006886 "intracellular
protein transport" evidence=IC] [GO:0006896 "Golgi to vacuole
transport" evidence=ISO] [GO:0010008 "endosome membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISO] [GO:0042147 "retrograde transport, endosome to Golgi"
evidence=ISO] PomBase:SPAC3A12.15 Pfam:PF04100 GO:GO:0006886
EMBL:CU329670 GO:GO:0010008 GO:GO:0006896 GO:GO:0042147
GO:GO:0000938 eggNOG:NOG327715 OMA:KFINHLF InterPro:IPR007234
PIR:T38683 RefSeq:NP_593341.1 EnsemblFungi:SPAC3A12.15.1
GeneID:2542930 KEGG:spo:SPAC3A12.15 OrthoDB:EOG42JS19
NextBio:20803966 Uniprot:P87129
Length = 756
Score = 499 (180.7 bits), Expect = 4.0e-67, Sum P(2) = 4.0e-67
Identities = 111/441 (25%), Positives = 231/441 (52%)
Query: 32 LDDHDFDSVQYINSLFPTEQSLSNIDDVIMKMESNIKEMDEEIETVVRSQSGVGQDGKKA 91
+ +++F V+ ++ L P + + ++ + + + ++E ++++ ++ +
Sbjct: 14 IGNNEFKFVETLHELLPEDITYDDLGSLRLSLSERLQESVKKLDANKKTYEDAKLSMGEK 73
Query: 92 LEDSQKVIMQLFSQVRDIKSKAEKSEEMVREITRDIKLLDTAKRNLTTAITCLNHLHMLV 151
++D I+ L ++ ++S AE ++ + ++T +IK LD AK+NL T++T L L MLV
Sbjct: 74 MDDLNSSIVSLLQELSTLQSVAENTQSSIVQMTSEIKNLDFAKQNLATSMTMLKRLQMLV 133
Query: 152 TGVHSLRTLIEQRQYGEIVMPLQGVIEVMKHFQDSTDIPQILELRSQVAQIQNTLSEQIT 211
T LRTL + +++GE + +Q ++++ F+ + +I L +++ Q + EQ+
Sbjct: 134 TAYEKLRTLRQNQKFGEAISLMQATLQLLNFFKKYRSVERIASLSRSISEFQKSFYEQVF 193
Query: 212 QDLKNAFQNPSS--GSFVPS--KQIAEALRVVSILDPKVKKNILEWFISLQLSEYLVLFD 267
++ F+ S G F PS + + E R + I ++++ W+ QL +++ +F
Sbjct: 194 DTFQSQFKKESGMRGGFSPSSVQYLNELCRFIDIFAGDPPESVIRWYCRHQLEDFMKVFR 253
Query: 268 ESEDSAWLDKIDKRYAWFKKQLLHVEDKFGTLFPPHWQLSEKITLEFCERTRSELGKIMS 327
E+E++ L+ + +RY WFKK L + +FPPHW++ ++ FCE T+++L K++
Sbjct: 254 ENEEAGSLENLPRRYTWFKKLLQTYDQLHKPIFPPHWKVDFRLYEVFCEETKNDLSKLLK 313
Query: 328 KRKFEIDVKLLLYAIQKTSNFEQLLEKRFADDET------EGENKTKFDGIIGSCFQNYL 381
+ + V + ++++T FE ++ RF + ++ E + + ++ + S F+ +
Sbjct: 314 DDRLSLQV--FVASLEQTLEFESFIDHRFYNTKSRFNSNFEPKERQAYNAL-SSVFEPHY 370
Query: 382 YIYIESLDRNLSDLIDRFAEDSKQVLNNINETCETSAAPVLPSCADLFMFYKKSLVQCTQ 441
+Y + S L + FA + KQ T E+S VL S LF Y+K+L Q +
Sbjct: 371 TLYFNQQSQEFSILFENFALE-KQT-----STDESSQ--VLSSSIKLFQAYRKTLTQFVR 422
Query: 442 LSTGEPMVALATTFQQYLRHY 462
L+ P+V L F ++LR Y
Sbjct: 423 LTRSSPLVGLKNLFIKWLRRY 443
Score = 246 (91.7 bits), Expect = 4.0e-67, Sum P(2) = 4.0e-67
Identities = 68/251 (27%), Positives = 119/251 (47%)
Query: 515 LTTAEYCLETTQQLEQKLKEKVDPNLANKIDLSNEQDVFHNVISSCIQLLVQDLELACEP 574
L TAEY TT +LE++ +E + +K+ S +V + + ++ E
Sbjct: 464 LNTAEYIYRTTIELEKRFQEISNKEFKDKMSFSEVLEVISSSRGTLLKFATGKFENVLNS 523
Query: 575 ALTAMVKTNWSSVESVGDQSGYVTAITSHL--KQSVPLIRTNLSSSRKYFTQFCVKFANS 632
L + K + ++E+VGDQS YV ++ K S L +L+ + FC + S
Sbjct: 524 DLEPLSKMDLKNIETVGDQSSYVGGAVQNMTAKASEFLSVVDLNM---FARNFCDRSCES 580
Query: 633 FIPKLVQHVFKCKPLSTVGAEQLLLDIHMLKTVLLDLPSIGSQVVRKAPASFTKVVVKGM 692
F + + ++ KP+S VGAEQLLLD++ K LL LP + S+ + M
Sbjct: 581 FTRQFLNAIYLAKPISEVGAEQLLLDLYSFKNALLKLPDLKQDY--SITDSYINHLTIFM 638
Query: 693 TKAEMILKLVMASAEPDICFVEQFCKLLPESDMTEFQRILDMKGLKTNEKNNLINLFRP- 751
E +LK ++ A P F++ + L+ + +T F +L++KG+ ++ ++ + F
Sbjct: 639 GYIETVLKTLLTPASPKAGFIQSYIFLVKDRSVTNFTVLLELKGVGKSDISSFLQQFSDF 698
Query: 752 --KNPSNTSSS 760
K P SS
Sbjct: 699 VKKTPQLEESS 709
>TAIR|locus:2036396 [details] [associations]
symbol:AT1G50970 "AT1G50970" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0006810 "transport"
evidence=ISS] Pfam:PF04100 EMBL:CP002684 InterPro:IPR007234
IPI:IPI00523682 RefSeq:NP_175510.2 UniGene:At.49965
ProteinModelPortal:F4I7Y2 EnsemblPlants:AT1G50970.1 GeneID:841519
KEGG:ath:AT1G50970 OMA:WTIFPAS Uniprot:F4I7Y2
Length = 569
Score = 513 (185.6 bits), Expect = 2.8e-63, Sum P(2) = 2.8e-63
Identities = 131/438 (29%), Positives = 228/438 (52%)
Query: 40 VQYINSLFPTEQSLSNIDDVIMKMESNIKEMDEEIETVVRSQSGVGQDGKKALEDSQKVI 99
+ +IN +FP E SLS ++ + K+ I+ +D I VV Q G K+ L D+
Sbjct: 7 LDFINQMFPVEASLSCVESFMQKICDEIRRVDATILAVVSQQGNSGTRAKENLNDAICAA 66
Query: 100 MQLFSQVRDIKSKAEKSEEMVREITRDIKLLDTAKRNLTTAITCLNHLHMLVTGVHSLRT 159
+L ++++IKSKAE++E MV++I DIK LD AK+N+TTA+T L+ L MLV+ V L+
Sbjct: 67 EELSHKIQEIKSKAEQTEAMVQDICSDIKKLDFAKKNITTAVTALSRLTMLVSAVQQLQV 126
Query: 160 LIEQRQYGEIVMPLQGVIEVMKHFQDSTDIPQILELRSQVAQIQNTLSEQITQDLKNAFQ 219
+ +RQY E L+ + E+ HF+ D+P+I+ELR ++ I+ L + D +
Sbjct: 127 MTSKRQYKEAATQLEAINELCNHFKAYMDLPKIMELREKLKNIKQILKFHVFSDFSSLGT 186
Query: 220 NPSSGSFVPSKQIAEALRVVSILDPKVKKNILEWFISLQLSEYLVLFDESEDSAWLDKID 279
+ K+++++ VV L+P V++ ++ F S +L+ Y ++ +E LD+I+
Sbjct: 187 GTETEELFLLKKLSDSCLVVDALEPSVREELINNFCSRELTSYEQIYVGAELKT-LDEIE 245
Query: 280 KRYAWFKKQLLHVEDKFGTLFPPHWQLSEKITLEFCERTRSELGKIMSKRKFEIDVKLLL 339
Y + + K+ T+FP W + ++ ++ +TR ++ I+ K + DV+ LL
Sbjct: 246 LIYNQLSCLIRKNQGKW-TIFPASWHVPYRLCIQLSRKTRVQVESILVNLKEKSDVEKLL 304
Query: 340 YAIQKTSNFEQLLEKRFA------DDETEG--ENKTKFD--GIIGSCFQNYLYIYIESLD 389
+++T FE+ LE +F DD G N KF+ G+I SCF+ +L IYIE +
Sbjct: 305 LELKRTLEFERELEMKFGGGGSIGDDIIGGGGNNSQKFNFRGMISSCFEPHLTIYIEKEE 364
Query: 390 RNLSDLIDRFA-EDSKQVLNNINETCETSAAPVLPSCADLFMFYKKSLVQCTQLSTGEPM 448
L L+++ E++ + + E S +L D+ M K Q +
Sbjct: 365 MELMQLLEKVVQEETWDIEEELGCHSENSVYLMLLDAHDMKMILLKVPSLARQPEASALL 424
Query: 449 VALATTFQQYLRHYAHKV 466
V AT Y++ H++
Sbjct: 425 VKTATA--SYVKLVNHQM 440
Score = 158 (60.7 bits), Expect = 2.8e-63, Sum P(2) = 2.8e-63
Identities = 40/115 (34%), Positives = 65/115 (56%)
Query: 655 LLLDIHMLKTVLLDLPSIGSQ------VVRKAPASFTKVVVKGMTKAEMILKLVMASAEP 708
+LLD H +K +LL +PS+ Q +V+ A AS+ K+V M +AE +LK++ A P
Sbjct: 397 MLLDAHDMKMILLKVPSLARQPEASALLVKTATASYVKLVNHQMKRAEAVLKVI---ASP 453
Query: 709 DICFVEQFCKLLPESDMTEFQRILDMKGLKTNEKNNLINLFRPKNPSNTSSSLVA 763
+ ++ + L PE EFQRIL +KGL E+ ++++ F + T S+ A
Sbjct: 454 IVTVIDTYRALFPEETPMEFQRILVLKGLTKAEQQSILDDFNNHSSRITQLSVAA 508
>CGD|CAL0005237 [details] [associations]
symbol:VPS53 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0000938 "GARP complex"
evidence=IEA] [GO:0006896 "Golgi to vacuole transport"
evidence=IEA] [GO:0042147 "retrograde transport, endosome to Golgi"
evidence=IEA] CGD:CAL0005237 Pfam:PF04100 EMBL:AACQ01000036
EMBL:AACQ01000035 eggNOG:NOG327715 InterPro:IPR007234
RefSeq:XP_718949.1 RefSeq:XP_719053.1 GeneID:3639319 GeneID:3639467
KEGG:cal:CaO19.13513 KEGG:cal:CaO19.6094 Uniprot:Q5AB78
Length = 699
Score = 329 (120.9 bits), Expect = 4.2e-41, Sum P(2) = 4.2e-41
Identities = 88/322 (27%), Positives = 162/322 (50%)
Query: 32 LDDHDFDSVQYINSLFPTEQSLSNIDDVIMKMESNIKEMDEEIETVVRSQSGVGQDGKKA 91
+D +D ++N +F + +L+ + ++ + +++ EEI V
Sbjct: 1 MDSPTYDPTTHLNKIFSSPDTLNELPQLLNHVSQYKRQLTEEINKSTAKYERV------- 53
Query: 92 LEDSQKVIMQLFSQVRDIKSKAEKSEEMVREITRDIKLLDTAKRNLTTAITCLNHLHMLV 151
D + I L + + +IK + +++ + ++T I+ LD K+NL ++T L L MLV
Sbjct: 54 --DLSEDISHLATSIGEIKRDSSMTKQSISQMTGSIQRLDCTKKNLVASMTLLKRLQMLV 111
Query: 152 TGVHSLRTLIEQRQYGEIVMPLQGVI-EVMKHFQDSTDIPQILELRSQVAQIQNTLSEQI 210
++L +++ Y EI L GV+ E+++ FQ I +I ++ V QN L + I
Sbjct: 112 NVNNTLSSILPSHDYKEIYQ-LLGVLKELLQFFQPYKSIDEINQINLMVVHTQNKLIDDI 170
Query: 211 TQDLKNAFQNPSSGSFVPSKQIAEALRVVSILDPKVKKNILEWFISLQLSEYLVLFDESE 270
D + ++N +Q+ R++ ++D K K +L WF +LQL + +F S
Sbjct: 171 FMDFEE-YKNKDE------EQLLFGARILELIDVKYKDKLLAWFYNLQLQDLQEIF--SG 221
Query: 271 DSAWLDKIDKRYAWFKKQLLHVEDKFGTLFPPHWQLSEKITLEFCERTRSELGKIMSKRK 330
++ LD +++R+ +FK L V+ +FP W +S IT EFC+ TR ++ K++ K
Sbjct: 222 EAGSLDNLNRRFIYFKNILKQVQQY--KIFP--WDISNAITQEFCQITRQDISKLLYNSK 277
Query: 331 FEIDVKLLLYAIQKTSNFEQLL 352
I+ K LL + KT FE+ L
Sbjct: 278 --IESKTLLDNLTKTLEFEKSL 297
Score = 188 (71.2 bits), Expect = 4.2e-41, Sum P(2) = 4.2e-41
Identities = 51/237 (21%), Positives = 106/237 (44%)
Query: 514 VLTTAEYCLETTQQLEQKLKEKVDPNLANKIDLSNEQDVFHNVISSCIQLLVQDLELACE 573
+L T +Y + ++L K+++ +A D F+ +I+ I L+ + + +
Sbjct: 408 LLNTGDYIINNIEELADKIQKTTTHTIA-----PFNTDAFYQLINKSISSLLLKMSIDYK 462
Query: 574 PALTAMVKTNWSSVESVGDQSGYVTAITSHLKQSVPLIRTNLSSSRKYFTQFCVKFANSF 633
P +W ++SV D S Y+ + S +++ +I L Y F K
Sbjct: 463 PCWREFFNLDWGQLDSVNDISSYMNDLKSKTAENLRVILP-LIIRDSYVRNFNDKLVEML 521
Query: 634 IPKLVQHVFKCKPLSTVGAEQLLLDIHMLKTVLLDLPSIGSQVVRKAPASFTKVVVKGMT 693
+ + ++ KP++ EQ+L+D+ LK L P + V K S+ K V
Sbjct: 522 VTTIANNLKFVKPMTATSVEQILMDVSSLKEDALRFPLFSVKDVSK---SYQKFVNHQFG 578
Query: 694 KAEMILKLVMASAEPDICFVEQFCKLLPESDMTEFQRILDMKGLKTNEKNNLINLFR 750
+ +LKL+M + P +E + L+ + ++ F ++L +KG+ + + ++ F+
Sbjct: 579 DLQSLLKLLMVPSIPVENLIESYFALIGDKSVSNFVKVLKLKGVDKAQHHKYVDNFK 635
Score = 125 (49.1 bits), Expect = 0.00040, P = 0.00040
Identities = 137/621 (22%), Positives = 252/621 (40%)
Query: 121 REITRDIKLLDTAKRNLTTAITCLNHLHMLVTGVHSLRTLIEQRQYGEIVMPLQGVIEVM 180
R++T +I TAK ++HL + + ++ +Q ++ +Q +
Sbjct: 37 RQLTEEINK-STAKYERVDLSEDISHLATSIGEIKRDSSMTKQ-SISQMTGSIQRLDCTK 94
Query: 181 KHFQDSTDIPQILELRSQVAQIQNTLSEQI-TQDLKNAFQ-----NPSSGSFVPSKQIAE 234
K+ S + + L++ + + NTLS + + D K +Q F P K I E
Sbjct: 95 KNLVASMTLLKRLQM---LVNVNNTLSSILPSHDYKEIYQLLGVLKELLQFFQPYKSIDE 151
Query: 235 ALRVVSILDPKVKKNILEWFISLQLSEYLVLFDESE---DSAWLDKIDKRY-----AWFK 286
+ ++++ + +++ I + EY DE + + L+ ID +Y AWF
Sbjct: 152 -INQINLMVVHTQNKLID-DIFMDFEEYKNK-DEEQLLFGARILELIDVKYKDKLLAWFY 208
Query: 287 KQLLHVEDKFGTLFPPHWQLSEKITLEFCERTRSELGKIMSKRKFEIDVKLLLYAIQKTS 346
L ++D +F + + F ++ L ++ + F D+ AI T
Sbjct: 209 N--LQLQD-LQEIFSGEAGSLDNLNRRFIY-FKNILKQVQQYKIFPWDIS---NAI--TQ 259
Query: 347 NFEQLLEKRFAD--DETEGENKTKFDGIIGSC-FQNYLYIYIESLDRNLSDLIDRFAEDS 403
F Q+ + + ++ E+KT D + + F+ L ++ E + + + +
Sbjct: 260 EFCQITRQDISKLLYNSKIESKTLLDNLTKTLEFEKSLGLHNE-ISSVFEPYLSIWVHEQ 318
Query: 404 KQVLNNINETCETSAAPVLP--------SCADLFMFYKKSLVQCTQLSTGEPMVALATTF 455
+ LN+ + E SA P LP S +LF + + L T+L+ G+ +V LA F
Sbjct: 319 DKYLNS--KMLEFSAVPQLPPDVPNIAVSSTELFKIFNRLLSHITKLTNGDTIVDLARVF 376
Query: 456 QQYLRHYAHKVLQQNVSKQA-GQTANTTLASVSNITRD--LGLIKDQRTKYTPQEQAKIC 512
+YL Y ++L +S G + + N T D + I++ K I
Sbjct: 377 NKYLSEYNRRILAPILSTDDFGAESLKYFTMLLN-TGDYIINNIEELADKIQKTTTHTIA 435
Query: 513 CVLTTAEYCLETTQQLEQKLKEKVD--PNLANKIDLSNEQDVFHNVISSCIQLLVQDLEL 570
T A Y L LK +D P +L Q N ISS + L
Sbjct: 436 PFNTDAFYQLINKSISSLLLKMSIDYKPCWREFFNLDWGQLDSVNDISSYMNDLKSKTAE 495
Query: 571 ACEPALTAMVKTNWSSVESVGDQ--SGYVTAITSHLKQSVPLIRTNLS------SSRKY- 621
L +++ ++ V + D+ VT I ++LK P+ T++ SS K
Sbjct: 496 NLRVILPLIIRDSY--VRNFNDKLVEMLVTTIANNLKFVKPMTATSVEQILMDVSSLKED 553
Query: 622 ---FTQFCVKFANSFIPKLVQHVFKCKPLSTVGAEQLLLDIHMLKTVLLD--LPSIGSQV 676
F F VK + K V H F G Q LL + M+ ++ ++ + S + +
Sbjct: 554 ALRFPLFSVKDVSKSYQKFVNHQF--------GDLQSLLKLLMVPSIPVENLIESYFALI 605
Query: 677 VRKAPASFTKVV-VKGMTKAE 696
K+ ++F KV+ +KG+ KA+
Sbjct: 606 GDKSVSNFVKVLKLKGVDKAQ 626
>UNIPROTKB|Q5AB78 [details] [associations]
symbol:VPS53 "Putative uncharacterized protein VPS53"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] CGD:CAL0005237 Pfam:PF04100
EMBL:AACQ01000036 EMBL:AACQ01000035 eggNOG:NOG327715
InterPro:IPR007234 RefSeq:XP_718949.1 RefSeq:XP_719053.1
GeneID:3639319 GeneID:3639467 KEGG:cal:CaO19.13513
KEGG:cal:CaO19.6094 Uniprot:Q5AB78
Length = 699
Score = 329 (120.9 bits), Expect = 4.2e-41, Sum P(2) = 4.2e-41
Identities = 88/322 (27%), Positives = 162/322 (50%)
Query: 32 LDDHDFDSVQYINSLFPTEQSLSNIDDVIMKMESNIKEMDEEIETVVRSQSGVGQDGKKA 91
+D +D ++N +F + +L+ + ++ + +++ EEI V
Sbjct: 1 MDSPTYDPTTHLNKIFSSPDTLNELPQLLNHVSQYKRQLTEEINKSTAKYERV------- 53
Query: 92 LEDSQKVIMQLFSQVRDIKSKAEKSEEMVREITRDIKLLDTAKRNLTTAITCLNHLHMLV 151
D + I L + + +IK + +++ + ++T I+ LD K+NL ++T L L MLV
Sbjct: 54 --DLSEDISHLATSIGEIKRDSSMTKQSISQMTGSIQRLDCTKKNLVASMTLLKRLQMLV 111
Query: 152 TGVHSLRTLIEQRQYGEIVMPLQGVI-EVMKHFQDSTDIPQILELRSQVAQIQNTLSEQI 210
++L +++ Y EI L GV+ E+++ FQ I +I ++ V QN L + I
Sbjct: 112 NVNNTLSSILPSHDYKEIYQ-LLGVLKELLQFFQPYKSIDEINQINLMVVHTQNKLIDDI 170
Query: 211 TQDLKNAFQNPSSGSFVPSKQIAEALRVVSILDPKVKKNILEWFISLQLSEYLVLFDESE 270
D + ++N +Q+ R++ ++D K K +L WF +LQL + +F S
Sbjct: 171 FMDFEE-YKNKDE------EQLLFGARILELIDVKYKDKLLAWFYNLQLQDLQEIF--SG 221
Query: 271 DSAWLDKIDKRYAWFKKQLLHVEDKFGTLFPPHWQLSEKITLEFCERTRSELGKIMSKRK 330
++ LD +++R+ +FK L V+ +FP W +S IT EFC+ TR ++ K++ K
Sbjct: 222 EAGSLDNLNRRFIYFKNILKQVQQY--KIFP--WDISNAITQEFCQITRQDISKLLYNSK 277
Query: 331 FEIDVKLLLYAIQKTSNFEQLL 352
I+ K LL + KT FE+ L
Sbjct: 278 --IESKTLLDNLTKTLEFEKSL 297
Score = 188 (71.2 bits), Expect = 4.2e-41, Sum P(2) = 4.2e-41
Identities = 51/237 (21%), Positives = 106/237 (44%)
Query: 514 VLTTAEYCLETTQQLEQKLKEKVDPNLANKIDLSNEQDVFHNVISSCIQLLVQDLELACE 573
+L T +Y + ++L K+++ +A D F+ +I+ I L+ + + +
Sbjct: 408 LLNTGDYIINNIEELADKIQKTTTHTIA-----PFNTDAFYQLINKSISSLLLKMSIDYK 462
Query: 574 PALTAMVKTNWSSVESVGDQSGYVTAITSHLKQSVPLIRTNLSSSRKYFTQFCVKFANSF 633
P +W ++SV D S Y+ + S +++ +I L Y F K
Sbjct: 463 PCWREFFNLDWGQLDSVNDISSYMNDLKSKTAENLRVILP-LIIRDSYVRNFNDKLVEML 521
Query: 634 IPKLVQHVFKCKPLSTVGAEQLLLDIHMLKTVLLDLPSIGSQVVRKAPASFTKVVVKGMT 693
+ + ++ KP++ EQ+L+D+ LK L P + V K S+ K V
Sbjct: 522 VTTIANNLKFVKPMTATSVEQILMDVSSLKEDALRFPLFSVKDVSK---SYQKFVNHQFG 578
Query: 694 KAEMILKLVMASAEPDICFVEQFCKLLPESDMTEFQRILDMKGLKTNEKNNLINLFR 750
+ +LKL+M + P +E + L+ + ++ F ++L +KG+ + + ++ F+
Sbjct: 579 DLQSLLKLLMVPSIPVENLIESYFALIGDKSVSNFVKVLKLKGVDKAQHHKYVDNFK 635
Score = 125 (49.1 bits), Expect = 0.00040, P = 0.00040
Identities = 137/621 (22%), Positives = 252/621 (40%)
Query: 121 REITRDIKLLDTAKRNLTTAITCLNHLHMLVTGVHSLRTLIEQRQYGEIVMPLQGVIEVM 180
R++T +I TAK ++HL + + ++ +Q ++ +Q +
Sbjct: 37 RQLTEEINK-STAKYERVDLSEDISHLATSIGEIKRDSSMTKQ-SISQMTGSIQRLDCTK 94
Query: 181 KHFQDSTDIPQILELRSQVAQIQNTLSEQI-TQDLKNAFQ-----NPSSGSFVPSKQIAE 234
K+ S + + L++ + + NTLS + + D K +Q F P K I E
Sbjct: 95 KNLVASMTLLKRLQM---LVNVNNTLSSILPSHDYKEIYQLLGVLKELLQFFQPYKSIDE 151
Query: 235 ALRVVSILDPKVKKNILEWFISLQLSEYLVLFDESE---DSAWLDKIDKRY-----AWFK 286
+ ++++ + +++ I + EY DE + + L+ ID +Y AWF
Sbjct: 152 -INQINLMVVHTQNKLID-DIFMDFEEYKNK-DEEQLLFGARILELIDVKYKDKLLAWFY 208
Query: 287 KQLLHVEDKFGTLFPPHWQLSEKITLEFCERTRSELGKIMSKRKFEIDVKLLLYAIQKTS 346
L ++D +F + + F ++ L ++ + F D+ AI T
Sbjct: 209 N--LQLQD-LQEIFSGEAGSLDNLNRRFIY-FKNILKQVQQYKIFPWDIS---NAI--TQ 259
Query: 347 NFEQLLEKRFAD--DETEGENKTKFDGIIGSC-FQNYLYIYIESLDRNLSDLIDRFAEDS 403
F Q+ + + ++ E+KT D + + F+ L ++ E + + + +
Sbjct: 260 EFCQITRQDISKLLYNSKIESKTLLDNLTKTLEFEKSLGLHNE-ISSVFEPYLSIWVHEQ 318
Query: 404 KQVLNNINETCETSAAPVLP--------SCADLFMFYKKSLVQCTQLSTGEPMVALATTF 455
+ LN+ + E SA P LP S +LF + + L T+L+ G+ +V LA F
Sbjct: 319 DKYLNS--KMLEFSAVPQLPPDVPNIAVSSTELFKIFNRLLSHITKLTNGDTIVDLARVF 376
Query: 456 QQYLRHYAHKVLQQNVSKQA-GQTANTTLASVSNITRD--LGLIKDQRTKYTPQEQAKIC 512
+YL Y ++L +S G + + N T D + I++ K I
Sbjct: 377 NKYLSEYNRRILAPILSTDDFGAESLKYFTMLLN-TGDYIINNIEELADKIQKTTTHTIA 435
Query: 513 CVLTTAEYCLETTQQLEQKLKEKVD--PNLANKIDLSNEQDVFHNVISSCIQLLVQDLEL 570
T A Y L LK +D P +L Q N ISS + L
Sbjct: 436 PFNTDAFYQLINKSISSLLLKMSIDYKPCWREFFNLDWGQLDSVNDISSYMNDLKSKTAE 495
Query: 571 ACEPALTAMVKTNWSSVESVGDQ--SGYVTAITSHLKQSVPLIRTNLS------SSRKY- 621
L +++ ++ V + D+ VT I ++LK P+ T++ SS K
Sbjct: 496 NLRVILPLIIRDSY--VRNFNDKLVEMLVTTIANNLKFVKPMTATSVEQILMDVSSLKED 553
Query: 622 ---FTQFCVKFANSFIPKLVQHVFKCKPLSTVGAEQLLLDIHMLKTVLLD--LPSIGSQV 676
F F VK + K V H F G Q LL + M+ ++ ++ + S + +
Sbjct: 554 ALRFPLFSVKDVSKSYQKFVNHQF--------GDLQSLLKLLMVPSIPVENLIESYFALI 605
Query: 677 VRKAPASFTKVV-VKGMTKAE 696
K+ ++F KV+ +KG+ KA+
Sbjct: 606 GDKSVSNFVKVLKLKGVDKAQ 626
>SGD|S000003566 [details] [associations]
symbol:VPS53 "Component of the GARP (Golgi-associated
retrograde protein) complex" species:4932 "Saccharomyces
cerevisiae" [GO:0000938 "GARP complex" evidence=IPI] [GO:0005794
"Golgi apparatus" evidence=IEA;IDA;TAS] [GO:0042147 "retrograde
transport, endosome to Golgi" evidence=IDA] [GO:0006896 "Golgi to
vacuole transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] SGD:S000003566 Pfam:PF04100 EMBL:BK006943
GO:GO:0015031 GO:GO:0010008 GO:GO:0006896 GO:GO:0042147
GO:GO:0000938 eggNOG:NOG327715 GeneTree:ENSGT00390000015165
InterPro:IPR007234 OrthoDB:EOG42JS19 EMBL:Z49304 PIR:S56801
RefSeq:NP_012505.1 PDB:3NS4 PDBsum:3NS4 ProteinModelPortal:P47061
SMR:P47061 DIP:DIP-5902N IntAct:P47061 MINT:MINT-619612
STRING:P47061 PaxDb:P47061 EnsemblFungi:YJL029C GeneID:853423
KEGG:sce:YJL029C CYGD:YJL029c HOGENOM:HOG000000812 OMA:VEDYSRY
EvolutionaryTrace:P47061 NextBio:973951 Genevestigator:P47061
GermOnline:YJL029C Uniprot:P47061
Length = 822
Score = 400 (145.9 bits), Expect = 5.9e-34, P = 5.9e-34
Identities = 165/736 (22%), Positives = 335/736 (45%)
Query: 36 DFDSVQYINSLFPTEQSLSNIDDVIMKMESNIKEMDEEIETVVRSQSGVGQDGKKA--LE 93
D+D ++ I ++ +++SL+NID++I S K++ E+I ++ ++ + + K + +E
Sbjct: 7 DYDPLEDITNILFSKESLNNIDELISITRSYKKQLQEDI---LKEENELKEHPKNSAEIE 63
Query: 94 DSQKVIMQLFSQVRDIKSKAEKSEEMVREITRDIKLLDTAKRNLTTAITCLNHLHMLVTG 153
S + + Q F + +D+ + E + + +T I LD AK+NLT ++T +L +L
Sbjct: 64 ASLRKVFQDFKETQDVSASTELT---ISNLTEGISYLDIAKKNLTHSLTLFQNLKILTDS 120
Query: 154 VHSLRTLIEQRQYGEIVMPLQGVIEVMKH-FQDSTDIPQILELRSQVAQIQNTLSEQITQ 212
L+ Q + ++V P + + + ++ F + +I L S +++++ +I Q
Sbjct: 121 YIQCNELLSQGSFKKMVSPYKIMCSLAENTFISYKSLDEINYLLSSISRLKGDTLSKIKQ 180
Query: 213 DLKNAFQ--NPSSGSFVPSKQIAEALRVVSILDPKVKKNILEWFISLQLSEYLVLFDESE 270
+ F N S + ++ E + D + +++W + L E +F +
Sbjct: 181 NYNALFSGGNISEHDTALTMELREGACELLDCDTSTRAQMIDWCLDKLLFEMKEIFRVDD 240
Query: 271 DSAWLDKIDKRYAWFKKQLLHVEDKFGTLFPPHWQLSEKITLEFCERTRSELGKIMSKRK 330
++ L+ + +RY +FKK L + KF F W+++ ++T F T +L ++ KR+
Sbjct: 241 EAGSLENLSRRYIYFKKILNNFNSKFADYFLKDWEMAVRLTTTFYHITHKDLQTLL-KRE 299
Query: 331 FEI---DVKLLLYAIQKTSNFEQLLEKRFADDETEGENKTKFDGIIGSCFQNYLYIYIES 387
F+ + L + A+Q T +FE+ ++ RF+ K K + + SCF+ YL +++
Sbjct: 300 FKDKNPSIDLFMTALQSTLDFEKYIDVRFS-------KKIK-EPKLSSCFEPYLTLWVSH 351
Query: 388 LDRNLSDLIDRFAEDSKQVLNNINETCETSAAPVLPSCADLFMFYKKSLVQCTQL----S 443
++ + + + K N ET + VLPS ADLF Y+ L Q +L +
Sbjct: 352 QNQMMEKKFLSYMSEPKYPSN------ETESL-VLPSSADLFRTYRSVLTQTLELIDNNA 404
Query: 444 TGEPMVALATTFQQYLRHYAHKVL-----QQNVSKQAG-QTANTTLASVSNI---TRDLG 494
+ +LA F ++L+ Y+ K+L N+ Q + A T+ ++ +
Sbjct: 405 NDSILTSLANFFSRWLQTYSQKILLPLLLPDNIEVQDKLEAAKYTVLLINTADYCATTID 464
Query: 495 LIKDQRTKYTPQEQAKICCVLTTAEYCLETTQQLEQKLKEKVDPNLANKI--DLSNEQDV 552
++D+ ++++ + T + + L +V P N + + N D
Sbjct: 465 QLEDKLSEFSGNREKLANSFTKTKNIYDDLLAKGTSFLLNRVIPLDLNFVWREFINN-DW 523
Query: 553 FHNVISSCIQLLVQDLELACEPALT-AMVKTNW---SSVESVGDQSGYVTAITSHLKQSV 608
+ I + +V + PALT A +K S++ + Q + L + +
Sbjct: 524 SNAAIEDYSRYMVTLKSVLKMPALTDASIKQQQEQPSTLAFILSQFNRDVYKWNFLDKVI 583
Query: 609 PLIRTNLSSSRKYFTQFCVKFANSFIPKLVQHVFKCKPLSTVGAEQLLLDIHMLKTVLLD 668
+I TN S+ Q F+ + + F+ + + +G EQLLLD+ +LK +
Sbjct: 584 DIITTNFVSNTIRLLQPVPPFSLAGSKRK----FETRTVVNIG-EQLLLDLELLKEIFHT 638
Query: 669 LP-SIGSQVVRKAPASFTKVVVKGMTKAEMILK---LVMASAEPDICFVEQFCKLL---P 721
LP S+ + + S+ +V + +LK L+MA + + E + KL P
Sbjct: 639 LPESVSNDSDLRENTSYKRVKRHADNNIDQLLKFIKLLMAPLDSADDYYETYSKLTNNNP 698
Query: 722 ESDMTEFQRILDMKGL 737
+S + F +L +KG+
Sbjct: 699 DSAVWSF--VLALKGI 712
>RGD|1311391 [details] [associations]
symbol:Vps53 "vacuolar protein sorting 53 homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000938 "GARP
complex" evidence=ISO] RGD:1311391 Pfam:PF04100 InterPro:IPR007234
IPI:IPI00776805 Ensembl:ENSRNOT00000056287 ArrayExpress:F1LXD5
Uniprot:F1LXD5
Length = 120
Score = 314 (115.6 bits), Expect = 4.1e-27, P = 4.1e-27
Identities = 62/100 (62%), Positives = 77/100 (77%)
Query: 91 ALEDSQKVIMQLFSQVRDIKSKAEKSEEMVREITRDIKLLDTAKRNLTTAITCLNHLHML 150
ALE++QK I QLF +++DIK KAEKSE+MV+EITRDIK LD AKR+LTT+IT LNHLHML
Sbjct: 21 ALEEAQKAIQQLFGKIKDIKDKAEKSEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHML 80
Query: 151 VTGVHSLRTLIEQRQYGEIVMPLQGVIEVMKHFQDSTDIP 190
GV SL + +RQYGE+ LQGV+ V++HF IP
Sbjct: 81 AGGVDSLEAMTRRRQYGEVANLLQGVMNVLEHFHKYMGIP 120
>UNIPROTKB|G4NB99 [details] [associations]
symbol:MGG_00594 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043581 "mycelium development" evidence=IEP] InterPro:IPR012929
Pfam:PF07926 EMBL:CM001235 GO:GO:0005643 GO:GO:0006606 KO:K09291
GO:GO:0043581 RefSeq:XP_003718445.1 ProteinModelPortal:G4NB99
EnsemblFungi:MGG_00594T0 GeneID:2675100 KEGG:mgr:MGG_00594
Uniprot:G4NB99
Length = 2056
Score = 135 (52.6 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 107/555 (19%), Positives = 217/555 (39%)
Query: 64 ESNIKEM-DEEIETVVRSQSG-VGQDGKKALEDSQKVIMQLFSQVRDIKSKAEKSEEMVR 121
E + ++ DEE+E R Q G V ++ + D+ +I + F +DI EK+EE++R
Sbjct: 520 EKGLDQLTDEEVEHFSRLQRGEVSENSLNDMSDTHMLITEKFVAFKDIAELQEKNEELLR 579
Query: 122 EITRDIKLLDTAKRNLTTAITCLNHLHMLVTGVHSLRTLIEQRQYGEIVMPLQGVIEVMK 181
+TRD+ K A+ + + LR L+ + Q Q + MK
Sbjct: 580 -VTRDLAY----KFENEEALAAQRNAAQDQQEIEKLRDLVTKLQEES-----QALTTRMK 629
Query: 182 HFQDSTDI-PQILELRSQVAQIQNTLSEQITQDLKNAFQNPSSGSFVPSKQIAEALRVV- 239
+ D+ ++L+ ++ +IQ+ L + D + + S + + ALR +
Sbjct: 630 SYMTERDMFRRMLQQKATAGEIQSVLGNSV--DGREVLASIEQNS-ADDQDLNAALRELQ 686
Query: 240 SILDPKVKKNILEWFISLQLSEYLVLFDESEDSAWLDKIDKRYAWFKKQLLHVEDKFGTL 299
S D + ++ + ++ L D+S A + ++ + + ++ ++ L
Sbjct: 687 SNFDAYRNEQSIDLQTVREQAKQLA-DDKSALQAEVARVTSQLSLLTERYETLQGTNADL 745
Query: 300 FPPHWQLSEKITLEFCERTRSELGKIMSKRKFEIDVKLLLYAIQ-KTSN-------FEQL 351
L ++ + + ++ G S+ + I+ K LL +++ + SN ++ +
Sbjct: 746 EAQKEHLKKRAS-DLSQQVAKTEGLAQSRAEDLIETKGLLESMRAENSNLKAEKSLWKSI 804
Query: 352 LEKRFADDETEGENKTKFDGIIGS--CFQNYLYIYIESLDRNLSDLIDRFAEDSKQVLNN 409
++ D+E GE K++ ++ S QN + R + ID +
Sbjct: 805 QDRLIKDNEDLGEEKSRLSNLLASQQSLQNERQLSESETKRRMQSQIDTLETELNTTKRR 864
Query: 410 INETCETSAAPVLPSCADLFMFYKKSLVQCTQLSTG-EPMVALATTFQQYLRHYAHKVLQ 468
+ + E S L D K+ LS E +AL T+ ++
Sbjct: 865 LADEVEESKKLQLRKEYDTQQAQKRIDDLMAALSQNKEESIALKTSRDHLQARVDELTIE 924
Query: 469 QNVSKQAGQTANTTLASVSNITRDLGLIKDQ--RTKYTPQEQAKICCVLTTAEYCLETTQ 526
+++ Q L S +N T +DQ R + E + L A LE +
Sbjct: 925 VRSAEERAQRLQPQLTSRANHTNAGEDSEDQEARIQELTGEVVDLRRELEIANTRLENAK 984
Query: 527 QLEQKLKEKVDPNLANKIDLSNEQDVFHNVISSCI---QLLVQDLELACEPALTAMVKTN 583
+ KE + L + Q+ + + S I +++LE L+A + T+
Sbjct: 985 AEAEHFKELAQTMEEDLRSLESSQETYREELDSTIAAKDAKIKELEQRIGD-LSAELATS 1043
Query: 584 WSSVESVGDQSGYVT 598
S + S+ D G ++
Sbjct: 1044 NSELSSLRDSQGEIS 1058
Score = 50 (22.7 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 40/182 (21%), Positives = 78/182 (42%)
Query: 530 QKLKEKVDPNLANKIDLSNEQDVFHNVISSCIQLLVQDLEL---ACEPALTAMVKTNWSS 586
Q+L+ ++ P A +L N Q+V+ + I+ L +D + E LT + +
Sbjct: 1325 QQLETQLHPLQARVGELEN-QEVY---LQEEIKQLQEDRDRWQKRTESILTKYGRVDPGE 1380
Query: 587 VESVGDQSGYVTAITSHLKQSVPLIRTNLSSSRKYFTQFCVKFANSFIPKLVQHVFKCKP 646
+E + + A LKQ+ I+T L ++K K+ N +++ K K
Sbjct: 1381 LEQMKQSVANLEAERDALKQNEDGIKTQLEEAQKTLESERTKW-NEARGRIIDQA-KSKA 1438
Query: 647 LSTVGAEQLLLD-IHMLKTVLLDLPSIGS-QVVRKAPASFTKVVVKGMTKAEMILKLVMA 704
G + L + ++ LK + L GS +VVR A+ + + + ++ + + A
Sbjct: 1439 REQTGVIRTLNEELNALKENIKSLE--GSLEVVRSEKAAMEEQLATAHEQLQLQQQQLQA 1496
Query: 705 SA 706
A
Sbjct: 1497 PA 1498
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.131 0.366 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 790 777 0.00094 121 3 11 22 0.40 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 623 (66 KB)
Total size of DFA: 366 KB (2183 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 84.07u 0.15s 84.22t Elapsed: 00:00:07
Total cpu time: 84.08u 0.15s 84.23t Elapsed: 00:00:07
Start: Thu Aug 15 16:55:38 2013 End: Thu Aug 15 16:55:45 2013