Your job contains 1 sequence.
>psy17364
MLHSKSSFLARFFHASANQLTTNKSLLGKLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQ
EQAKELGWAKASKLAGRKTSQGLISIAVEGKHATMVEFNCETDFVARNKQFQGMAELISL
ACLNYTKTQVQPQEPFAKVFLDTAQLQSLAGPENKSLADHVAILISSVGENLVLRRAACV
TVNEDHDVAGFTHPSPGLEHTGPILGKFGSLMVYQDLKTGDKQQNVQNVARQLCQHVIGM
NPKSIGSEEDTPNEDPEEETIMYHQEFLLDPTQYVGEVIVAAGIKPVEFLRFECGEGCEE
SEETQTQAATAG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17364
(312 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
MGI|MGI:1913649 - symbol:Tsfm "Ts translation elongation ... 536 1.2e-51 1
UNIPROTKB|P43897 - symbol:TSFM "Elongation factor Ts, mit... 526 1.3e-50 1
UNIPROTKB|P43896 - symbol:TSFM "Elongation factor Ts, mit... 518 9.5e-50 1
RGD|1593058 - symbol:Tsfm "Ts translation elongation fact... 515 2.0e-49 1
FB|FBgn0032646 - symbol:CG6412 species:7227 "Drosophila m... 508 1.1e-48 1
UNIPROTKB|F1PBM5 - symbol:METTL21B "Elongation factor Ts"... 497 1.6e-47 1
ZFIN|ZDB-GENE-061215-17 - symbol:tsfm "Ts translation elo... 471 9.1e-45 1
UNIPROTKB|F8W6R3 - symbol:TSFM "Elongation factor Ts, mit... 429 2.6e-40 1
WB|WBGene00010094 - symbol:tsfm-1 species:6239 "Caenorhab... 385 1.1e-38 2
UNIPROTKB|C9JT21 - symbol:TSFM "Elongation factor Ts" spe... 380 4.0e-35 1
UNIPROTKB|F8VS27 - symbol:TSFM "Elongation factor Ts, mit... 345 2.0e-31 1
UNIPROTKB|F8VPA7 - symbol:TSFM "Elongation factor Ts, mit... 337 1.4e-30 1
UNIPROTKB|C9JG32 - symbol:TSFM "Elongation factor Ts" spe... 325 2.7e-29 1
UNIPROTKB|I3LF68 - symbol:TSFM "Elongation factor Ts, mit... 300 1.2e-26 1
DICTYBASE|DDB_G0286399 - symbol:tsfm "elongation factor T... 222 3.6e-18 1
TIGR_CMR|SPO_1975 - symbol:SPO_1975 "translation elongati... 198 4.0e-17 2
UNIPROTKB|J9JHC7 - symbol:TSFM "Uncharacterized protein" ... 210 4.1e-17 1
TIGR_CMR|GSU_1920 - symbol:GSU_1920 "translation elongati... 171 1.6e-16 2
TAIR|locus:2136158 - symbol:AT4G11120 species:3702 "Arabi... 204 1.9e-15 1
TIGR_CMR|ECH_0515 - symbol:ECH_0515 "translation elongati... 198 4.8e-15 1
TIGR_CMR|CBU_1385 - symbol:CBU_1385 "translation elongati... 164 3.6e-14 3
TIGR_CMR|DET_0376 - symbol:DET_0376 "translation elongati... 181 5.0e-14 1
TIGR_CMR|BA_3964 - symbol:BA_3964 "translation elongation... 185 6.0e-14 2
TIGR_CMR|CHY_1786 - symbol:CHY_1786 "translation elongati... 159 1.1e-13 2
UNIPROTKB|P0A6P1 - symbol:tsf species:83333 "Escherichia ... 156 9.6e-11 2
TIGR_CMR|CJE_1315 - symbol:CJE_1315 "translation elongati... 171 1.0e-10 1
POMBASE|SPBC800.07c - symbol:tsf1 "mitochondrial translat... 168 1.3e-10 1
TIGR_CMR|NSE_0947 - symbol:NSE_0947 "translation elongati... 166 2.0e-10 1
UNIPROTKB|Q9KPV3 - symbol:tsf "Elongation factor Ts" spec... 148 5.2e-10 2
TIGR_CMR|VC_2259 - symbol:VC_2259 "elongation factor Ts" ... 148 5.2e-10 2
TIGR_CMR|APH_0398 - symbol:APH_0398 "translation elongati... 158 1.9e-09 1
UNIPROTKB|Q10788 - symbol:tsf "Elongation factor Ts" spec... 155 3.4e-09 1
TAIR|locus:2119946 - symbol:emb2726 "embryo defective 272... 155 9.5e-09 2
TIGR_CMR|CPS_1554 - symbol:CPS_1554 "translation elongati... 143 1.2e-07 1
TIGR_CMR|SO_1630 - symbol:SO_1630 "translation elongation... 139 3.5e-07 1
UNIPROTKB|F8WCK2 - symbol:TSFM "Elongation factor Ts, mit... 104 2.9e-05 1
>MGI|MGI:1913649 [details] [associations]
symbol:Tsfm "Ts translation elongation factor,
mitochondrial" species:10090 "Mus musculus" [GO:0003746
"translation elongation factor activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0006412 "translation" evidence=IEA] [GO:0006414
"translational elongation" evidence=IEA] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 MGI:MGI:1913649 GO:GO:0005739
GO:GO:0005634 GO:GO:0003746 SUPFAM:SSF46934 eggNOG:COG0264
KO:K02357 Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
CTD:10102 GeneTree:ENSGT00390000016293 HOGENOM:HOG000220988
HOVERGEN:HBG005571 OMA:FANCKKA EMBL:AK012240 EMBL:AK169164
EMBL:BC057904 IPI:IPI00113052 RefSeq:NP_079813.1 UniGene:Mm.29900
ProteinModelPortal:Q9CZR8 SMR:Q9CZR8 STRING:Q9CZR8
PhosphoSite:Q9CZR8 PaxDb:Q9CZR8 PRIDE:Q9CZR8
Ensembl:ENSMUST00000040560 GeneID:66399 KEGG:mmu:66399
UCSC:uc007hhm.1 InParanoid:Q9CZR8 ChiTaRS:TSFM NextBio:321563
Bgee:Q9CZR8 CleanEx:MM_TSFM Genevestigator:Q9CZR8
GermOnline:ENSMUSG00000040521 Uniprot:Q9CZR8
Length = 324
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 118/287 (41%), Positives = 179/287 (62%)
Query: 13 FHA--SANQLTTNKSLLGKLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKELGWAK 70
FHA S + ++K LL KLR+KTGYSF NCKKAL+ DL +AE WL +QA++ GW+K
Sbjct: 33 FHAGPSLSSAASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEDWLHKQAQKEGWSK 92
Query: 71 ASKLAGRKTSQGLISIAVEGKHATMVEFNCETDFVARNKQFQGMAELISLACLNYTKTQV 130
A+KL GRKT +GLI + EG A +VE NCETDFV+RN +FQ + + ++L + + +
Sbjct: 93 AAKLHGRKTKEGLIGLLQEGNTAVLVEVNCETDFVSRNLKFQQLVQQVALGTMAHCQNLT 152
Query: 131 QPQEPFAKVFLDTAQLQSLA-GPENK-SLADHVAILISSVGENLVLRRAACVTVNEDHDV 188
++K FL++++L LA GP+ + SL D +A+ I +GEN++L+RAA V V V
Sbjct: 153 DRLSTYSKGFLNSSELSELAAGPDREGSLKDQLALAIGKLGENMILKRAAWVKVPSGFYV 212
Query: 189 AGFTH---PSPGLEHTGPILGKFGSLMVYQDLKTGDKQQNVQNVARQLCQHVIGMNPKSI 245
+ H SP L++ +LGK+G+L++ + T ++ N++ V R+L QHV+GM P S+
Sbjct: 213 GSYVHGVTQSPSLQNL--VLGKYGALVICE---TPEQIANLEEVGRRLGQHVVGMAPLSV 267
Query: 246 GSXXXXXXXXXXXXXIMYHQEFLLDPTQYVGEVIVAAGIKPVEFLRF 292
GS M Q +LLDP+ +G+ + G+ V+F+RF
Sbjct: 268 GSLDDEPGGETETR--MLPQPYLLDPSITLGQYVQPQGVTVVDFVRF 312
>UNIPROTKB|P43897 [details] [associations]
symbol:TSFM "Elongation factor Ts, mitochondrial"
species:9606 "Homo sapiens" [GO:0003746 "translation elongation
factor activity" evidence=IEA] [GO:0032784 "regulation of
DNA-dependent transcription, elongation" evidence=TAS] [GO:0006414
"translational elongation" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005739 GO:GO:0005634 EMBL:CH471054 GO:GO:0003746
EMBL:AC025165 SUPFAM:SSF46934 GO:GO:0006414 eggNOG:COG0264
KO:K02357 Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
CTD:10102 HOGENOM:HOG000220988 HOVERGEN:HBG005571 OMA:FANCKKA
OrthoDB:EOG48PMKQ EMBL:AF110399 EMBL:AK304621 EMBL:AK308981
EMBL:BC022862 EMBL:BC093068 EMBL:L37936 IPI:IPI00021016
IPI:IPI00216260 IPI:IPI00916152 IPI:IPI00956590 PIR:I84606
RefSeq:NP_001166166.1 RefSeq:NP_001166167.1 RefSeq:NP_001166168.1
RefSeq:NP_005717.3 UniGene:Hs.632704 PDB:2CP9 PDBsum:2CP9
ProteinModelPortal:P43897 SMR:P43897 IntAct:P43897
MINT:MINT-3297563 STRING:P43897 PhosphoSite:P43897 DMDM:12644268
PaxDb:P43897 PRIDE:P43897 Ensembl:ENST00000323833
Ensembl:ENST00000454289 Ensembl:ENST00000540550
Ensembl:ENST00000543727 GeneID:10102 KEGG:hsa:10102 UCSC:uc001sqh.3
UCSC:uc001sqi.3 GeneCards:GC12P058176 HGNC:HGNC:12367 HPA:HPA006204
MIM:604723 MIM:610505 neXtProt:NX_P43897 Orphanet:168566
PharmGKB:PA37037 EvolutionaryTrace:P43897 GenomeRNAi:10102
NextBio:38213 ArrayExpress:P43897 Bgee:P43897 CleanEx:HS_TSFM
Genevestigator:P43897 GermOnline:ENSG00000123297 GO:GO:0032784
Uniprot:P43897
Length = 325
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 113/276 (40%), Positives = 174/276 (63%)
Query: 22 TNKSLLGKLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKELGWAKASKLAGRKTSQ 81
++K LL KLR+KTGYSF NCKKAL+ DL +AE WL ++A++ GW+KA+KL GRKT +
Sbjct: 45 SSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKAAKLQGRKTKE 104
Query: 82 GLISIAVEGKHATMVEFNCETDFVARNKQFQGMAELISLACLNYTKTQVQPQEPFAKVFL 141
GLI + EG +VE NCETDFV+RN +FQ + + ++L + + +T ++K FL
Sbjct: 105 GLIGLLQEGNTTVLVEVNCETDFVSRNLKFQLLVQQVALGTMMHCQTLKDQPSAYSKGFL 164
Query: 142 DTAQLQSL-AGPENK-SLADHVAILISSVGENLVLRRAACVTVNEDHDVAGFTH---PSP 196
++++L L AGP+ + SL D +A+ I +GEN++L+RAA V V V + H SP
Sbjct: 165 NSSELSGLPAGPDREGSLKDQLALAIGKLGENMILKRAAWVKVPSGFYVGSYVHGAMQSP 224
Query: 197 GLEHTGPILGKFGSLMVYQDLKTGDKQQNVQNVARQLCQHVIGMNPKSIGSXXXXXXXXX 256
L +LGK+G+L++ + T +++ N+++V R+L QHV+GM P S+GS
Sbjct: 225 SLHKL--VLGKYGALVICE---TSEQKTNLEDVGRRLGQHVVGMAPLSVGSLDDEPGGEA 279
Query: 257 XXXXIMYHQEFLLDPTQYVGEVIVAAGIKPVEFLRF 292
M Q +LLDP+ +G+ + G+ V+F+RF
Sbjct: 280 ETK--MLSQPYLLDPSITLGQYVQPQGVSVVDFVRF 313
>UNIPROTKB|P43896 [details] [associations]
symbol:TSFM "Elongation factor Ts, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003746 "translation
elongation factor activity" evidence=IEA] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005739 GO:GO:0005634
GO:GO:0003746 SUPFAM:SSF46934 eggNOG:COG0264 KO:K02357
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713 EMBL:L37935
EMBL:BC149988 IPI:IPI00697490 PIR:I45941 RefSeq:NP_776629.1
UniGene:Bt.103027 PDB:1XB2 PDBsum:1XB2 ProteinModelPortal:P43896
SMR:P43896 IntAct:P43896 STRING:P43896 PRIDE:P43896
Ensembl:ENSBTAT00000022496 GeneID:281551 KEGG:bta:281551 CTD:10102
GeneTree:ENSGT00390000016293 HOGENOM:HOG000220988
HOVERGEN:HBG005571 InParanoid:P43896 OMA:FANCKKA OrthoDB:EOG48PMKQ
EvolutionaryTrace:P43896 NextBio:20805502 Uniprot:P43896
Length = 338
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 115/286 (40%), Positives = 176/286 (61%)
Query: 13 FHASA-NQLTTNKSLLGKLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKELGWAKA 71
FH+ + ++K LL KLR+KTGYSF NCKKAL+ DL +AE WL +QA++ GW+KA
Sbjct: 48 FHSGSWLSSASSKELLMKLRRKTGYSFINCKKALETCGGDLKQAESWLHKQAQKEGWSKA 107
Query: 72 SKLAGRKTSQGLISIAVEGKHATMVEFNCETDFVARNKQFQGMAELISLACLNYTKTQVQ 131
++L GRKT +GLI + EG +VE NCETDFV+RN +FQ + + ++L L + +
Sbjct: 108 ARLHGRKTKEGLIGLLQEGDTTVLVEVNCETDFVSRNLKFQQLVQQVALGTLLHCQNLKD 167
Query: 132 PQEPFAKVFLDTAQLQSL-AGPENK-SLADHVAILISSVGENLVLRRAACVTVNEDHDVA 189
++K FL++++L L AGPE + SL D +A+ I +GEN++L+RAA V V V
Sbjct: 168 QLSTYSKGFLNSSELSELPAGPEREGSLKDQLALAIGKLGENMILKRAAWVKVPAGFYVG 227
Query: 190 GFTHP---SPGLEHTGPILGKFGSLMVYQDLKTGDKQQNVQNVARQLCQHVIGMNPKSIG 246
+ H SP L + +LGK+G+L++ + T + + N+ ++ R+L QHV+GM P S+G
Sbjct: 228 SYVHGAMHSPSLHNL--VLGKYGALVICE---TSELKANLADLGRRLGQHVVGMAPLSVG 282
Query: 247 SXXXXXXXXXXXXXIMYHQEFLLDPTQYVGEVIVAAGIKPVEFLRF 292
S M Q +LLDP+ +G+ + G+ V+F+RF
Sbjct: 283 SLDDEPGGEAETK--MLSQPYLLDPSITLGQYVQPHGVSVVDFVRF 326
>RGD|1593058 [details] [associations]
symbol:Tsfm "Ts translation elongation factor, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0003746 "translation
elongation factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
RGD:1593058 GO:GO:0005739 GO:GO:0003746 SUPFAM:SSF46934
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
HOVERGEN:HBG005571 EMBL:AJ005161 IPI:IPI00555157
ProteinModelPortal:Q9QYU2 SMR:Q9QYU2 PRIDE:Q9QYU2
Genevestigator:Q9QYU2 Uniprot:Q9QYU2
Length = 324
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 116/286 (40%), Positives = 176/286 (61%)
Query: 14 HA--SANQLTTNKSLLGKLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKELGWAKA 71
HA S + ++K LL KLR+ TGYSF NCKKAL+ DL +AE WL +QA++ GW+KA
Sbjct: 34 HAGPSLSSSASSKELLMKLRRTTGYSFVNCKKALETCGGDLKQAEAWLHKQAQKEGWSKA 93
Query: 72 SKLAGRKTSQGLISIAVEGKHATMVEFNCETDFVARNKQFQGMAELISLACLNYTKTQVQ 131
+KL GRKT +GLI + E A +VE NCETDFV+RN +FQ + + ++L + + +
Sbjct: 94 AKLHGRKTKEGLIGLLQEENTAVLVEVNCETDFVSRNVKFQQLVQQVALGTMAHCQNLTD 153
Query: 132 PQEPFAKVFLDTAQLQSLA-GPENK-SLADHVAILISSVGENLVLRRAACVTVNEDHDVA 189
++K FL++++L LA GP+ + SL D +A+ I ++GEN+ L+RAA V V V
Sbjct: 154 QLSTYSKGFLNSSELSELAAGPDGEGSLKDQLALAIGTLGENMSLKRAAWVKVPSGFYVG 213
Query: 190 GFTH---PSPGLEHTGPILGKFGSLMVYQDLKTGDKQQNVQNVARQLCQHVIGMNPKSIG 246
+ H SP L++ +LGK+G+L++ Q T ++ N++ V R+L QHV+GM P S+G
Sbjct: 214 SYVHGEMQSPSLQNL--VLGKYGALVICQ---TPEQITNLEEVGRRLGQHVVGMAPLSVG 268
Query: 247 SXXXXXXXXXXXXXIMYHQEFLLDPTQYVGEVIVAAGIKPVEFLRF 292
S M Q +LLDP+ +G+ + G+ V+F+RF
Sbjct: 269 SLDDEPGGETETR--MLPQPYLLDPSITLGQYVQPQGVTVVDFVRF 312
>FB|FBgn0032646 [details] [associations]
symbol:CG6412 species:7227 "Drosophila melanogaster"
[GO:0006414 "translational elongation" evidence=ISS] [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] HAMAP:MF_00050 InterPro:IPR000449
InterPro:IPR001816 InterPro:IPR009060 InterPro:IPR014039
InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126
PROSITE:PS01127 GO:GO:0005739 EMBL:AE014134 GO:GO:0003746
SUPFAM:SSF46934 eggNOG:COG0264 KO:K02357 Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 GeneTree:ENSGT00390000016293
OMA:FANCKKA EMBL:AY051938 RefSeq:NP_609847.1 UniGene:Dm.4434
HSSP:P02997 ProteinModelPortal:Q9VJC7 SMR:Q9VJC7 IntAct:Q9VJC7
MINT:MINT-318283 STRING:Q9VJC7 PaxDb:Q9VJC7 PRIDE:Q9VJC7
EnsemblMetazoa:FBtr0080994 GeneID:35060 KEGG:dme:Dmel_CG6412
UCSC:CG6412-RA FlyBase:FBgn0032646 InParanoid:Q9VJC7
OrthoDB:EOG4VT4D3 PhylomeDB:Q9VJC7 ChiTaRS:CG6412 GenomeRNAi:35060
NextBio:791621 Bgee:Q9VJC7 Uniprot:Q9VJC7
Length = 318
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 107/273 (39%), Positives = 158/273 (57%)
Query: 24 KSLLGKLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKELGWAKASKLAGRKTSQGL 83
KS L LRKKTGY+F NCKKAL+ + D+G AEKWL EQA+ LGW+KA+K+A R T+ GL
Sbjct: 29 KSALAALRKKTGYTFANCKKALEKHNNDVGLAEKWLHEQAQTLGWSKATKVADRATAHGL 88
Query: 84 ISIAVEGKHATMVEFNCETDFVARNKQFQGMAELISLACLNYTKTQVQPQEPFAKVFLDT 143
I + + G MVE NCETDFVARN F+ + ++ CL YT + + K+ D
Sbjct: 89 IGVLIRGNRGAMVELNCETDFVARNDTFKRFVDHVACMCLQYTDLTDFDGDLW-KLGFDA 147
Query: 144 AQLQSLAGPENKSLADHVAILISSVGENLVLRRAACVTVNEDHDVAGFTHPSP-GLEHTG 202
L++L E ++L DH+A+LI ++GEN +RRA C N D + G+ HP+P + T
Sbjct: 148 DALRNLRTEEGRTLGDHLALLIGAIGENATIRRALCFKANNDLKLVGYAHPAPTNVGTTE 207
Query: 203 PI--LGKFGSLMVYQDLKTGDKQQNVQNVARQLCQHVIGMNPKSIGSXXXXX-XXXXXXX 259
I +GK+G+++ Y ++ + + + +CQ ++GM P IG
Sbjct: 208 GITQVGKYGAIVAY---RSTHPLLDFE-FHKSICQQIVGMKPTKIGEYDKDKPAENKDDE 263
Query: 260 XIMYHQEFLLDPTQYVGEVIVAAGIKPVEFLRF 292
+ HQE+LLD + VGE + + V++ RF
Sbjct: 264 TCLIHQEYLLDADKTVGEALQEHNCEIVDYHRF 296
>UNIPROTKB|F1PBM5 [details] [associations]
symbol:METTL21B "Elongation factor Ts" species:9615 "Canis
lupus familiaris" [GO:0003746 "translation elongation factor
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005622 GO:GO:0003746 SUPFAM:SSF46934 Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 OMA:FANCKKA
GeneTree:ENSGT00550000074572 EMBL:AAEX03006960 EMBL:AAEX03006959
Ensembl:ENSCAFT00000000451 Uniprot:F1PBM5
Length = 321
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 112/290 (38%), Positives = 175/290 (60%)
Query: 11 RFFHASANQLTT--NKSLLGKLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKELGW 68
R FHA ++ +K L KLR++TGYSF NCKKAL+ DL +AE WL +QA++ GW
Sbjct: 28 RPFHAGPWLWSSAPSKDALVKLRRRTGYSFVNCKKALEACGGDLKQAESWLHKQAQKEGW 87
Query: 69 AKASKLAGRKTSQGLISIAVEGKHATMVEFNCETDFVARNKQFQGMAELISLACLNYTKT 128
++A+KL GRKT +GLI + +G +VE NCETDFV+RN +FQ + + ++L L + +
Sbjct: 88 SRAAKLHGRKTKEGLIGLLQDGNATVLVEVNCETDFVSRNLKFQQLVQQVALGTLLHCQN 147
Query: 129 QVQPQEPFAKVFLDTAQLQSL-AGPENKS-LADHVAILISSVGENLVLRRAACVTVNEDH 186
++K FL++++L L AGPE + L D +A+ I +GEN+ L+RAA V V
Sbjct: 148 LKDQLSTYSKGFLNSSELSELPAGPEKEGCLKDQLALAIGKLGENMTLKRAAWVKVPAGF 207
Query: 187 DVAGFTHPSPGLEHTGPI----LGKFGSLMVYQDLKTGDKQQNVQNVARQLCQHVIGMNP 242
V + H G H+ + LGK+G+L+V + T +++ +++++ R+L QHV+GM P
Sbjct: 208 YVGSYVH---GAMHSSSLHNLELGKYGALVVCE---TSERKASLEDLGRRLGQHVVGMAP 261
Query: 243 KSIGSXXXXXXXXXXXXXIMYHQEFLLDPTQYVGEVIVAAGIKPVEFLRF 292
S+GS M Q +LLDP+ +G+ + G+ V+F+RF
Sbjct: 262 LSVGSLDDEPGGEAETK--MLSQPYLLDPSITLGQYVQPQGVSVVDFVRF 309
>ZFIN|ZDB-GENE-061215-17 [details] [associations]
symbol:tsfm "Ts translation elongation factor,
mitochondrial" species:7955 "Danio rerio" [GO:0003746 "translation
elongation factor activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006414 "translational
elongation" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01127 ZFIN:ZDB-GENE-061215-17 GO:GO:0005622 GO:GO:0003746
SUPFAM:SSF46934 Gene3D:3.30.479.20 PANTHER:PTHR11741
SUPFAM:SSF54713 TIGRFAMs:TIGR00116 HOGENOM:HOG000220988
HOVERGEN:HBG005571 EMBL:BC152076 IPI:IPI00829007 UniGene:Dr.84965
STRING:A7MC80 ArrayExpress:A7MC80 Uniprot:A7MC80
Length = 311
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 102/277 (36%), Positives = 159/277 (57%)
Query: 16 SANQLTTNKSLLGKLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKELGWAKASKLA 75
S L +K+LL + RK TGY+F NCKKAL+ D+ +AE WL EQAK+ GW+KA+KL
Sbjct: 35 SCPSLAADKALLLQPRKSTGYTFVNCKKALEKCNNDITQAESWLHEQAKKEGWSKATKLE 94
Query: 76 GRKTSQGLISIAVEGKHATMVEFNCETDFVARNKQFQGMAELISLACLNYTKTQVQPQEP 135
GRK +GLI + + A MVE NCETDFVARN++FQ + + ++L+ + + T +
Sbjct: 95 GRKAKEGLIGLMMHDNAAVMVEVNCETDFVARNEKFQQLVKDVALSVMAHQSTS--KKTG 152
Query: 136 FAKVFLDTAQLQSLAGPENKSLADHVAILISSVGENLVLRRAACVTVNEDHDVAGFTHPS 195
F K L + + L P+ SLAD +A+ I +GEN+ +RRA ++V D + + H +
Sbjct: 153 FIKSVLSSEDMSKLNAPDGPSLADQLALTIGRLGENIAMRRAVSLSVPSDWHIGSYIHGT 212
Query: 196 PGLEHTGPILGKFGSLMVYQDLKTGDKQQNVQNVARQLCQHVIGMNPKSIGSXXXXXXXX 255
+ G +G++GSL+V+Q G+ ++ + R+L QHV+G P S+G+
Sbjct: 213 VAGQ-VGIEMGRYGSLVVFQ----GEPKEGTYALGRKLAQHVMGEAPVSLGNMDDLPCGD 267
Query: 256 XXXXXIMYHQEFLLDPTQYVGEVIVAAGIKPVEFLRF 292
+ Q FL DP V + + + ++F+RF
Sbjct: 268 SETRLLP--QTFLPDPKYTVAQYLTLQDARVLDFIRF 302
>UNIPROTKB|F8W6R3 [details] [associations]
symbol:TSFM "Elongation factor Ts, mitochondrial"
species:9606 "Homo sapiens" [GO:0003746 "translation elongation
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] HAMAP:MF_00050
InterPro:IPR001816 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00889 PROSITE:PS01127 GO:GO:0005739 GO:GO:0005634
GO:GO:0003746 EMBL:AC025165 Gene3D:3.30.479.20 PANTHER:PTHR11741
SUPFAM:SSF54713 HGNC:HGNC:12367 IPI:IPI00910455
ProteinModelPortal:F8W6R3 SMR:F8W6R3 PRIDE:F8W6R3
Ensembl:ENST00000350762 UCSC:uc010sse.2 ArrayExpress:F8W6R3
Bgee:F8W6R3 Uniprot:F8W6R3
Length = 285
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 93/243 (38%), Positives = 149/243 (61%)
Query: 55 AEKWLQEQAKELGWAKASKLAGRKTSQGLISIAVEGKHATMVEFNCETDFVARNKQFQGM 114
AE WL ++A++ GW+KA+KL GRKT +GLI + EG +VE NCETDFV+RN +FQ +
Sbjct: 38 AEIWLHKEAQKEGWSKAAKLQGRKTKEGLIGLLQEGNTTVLVEVNCETDFVSRNLKFQLL 97
Query: 115 AELISLACLNYTKTQVQPQEPFAKVFLDTAQLQSL-AGPENK-SLADHVAILISSVGENL 172
+ ++L + + +T ++K FL++++L L AGP+ + SL D +A+ I +GEN+
Sbjct: 98 VQQVALGTMMHCQTLKDQPSAYSKGFLNSSELSGLPAGPDREGSLKDQLALAIGKLGENM 157
Query: 173 VLRRAACVTVNEDHDVAGFTH---PSPGLEHTGPILGKFGSLMVYQDLKTGDKQQNVQNV 229
+L+RAA V V V + H SP L +LGK+G+L++ + T +++ N+++V
Sbjct: 158 ILKRAAWVKVPSGFYVGSYVHGAMQSPSLHKL--VLGKYGALVICE---TSEQKTNLEDV 212
Query: 230 ARQLCQHVIGMNPKSIGSXXXXXXXXXXXXXIMYHQEFLLDPTQYVGEVIVAAGIKPVEF 289
R+L QHV+GM P S+GS M Q +LLDP+ +G+ + G+ V+F
Sbjct: 213 GRRLGQHVVGMAPLSVGSLDDEPGGEAETK--MLSQPYLLDPSITLGQYVQPQGVSVVDF 270
Query: 290 LRF 292
+RF
Sbjct: 271 VRF 273
>WB|WBGene00010094 [details] [associations]
symbol:tsfm-1 species:6239 "Caenorhabditis elegans"
[GO:0003746 "translation elongation factor activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006414
"translational elongation" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005739 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0000003 GO:GO:0003746
SUPFAM:SSF46934 eggNOG:COG0264 KO:K02357 Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 TIGRFAMs:TIGR00116
GeneTree:ENSGT00390000016293 HOGENOM:HOG000220988 OMA:FANCKKA
EMBL:D87850 EMBL:Z78198 PIR:T22713 RefSeq:NP_506079.1
UniGene:Cel.19688 ProteinModelPortal:Q20819 SMR:Q20819
DIP:DIP-25617N MINT:MINT-1104171 STRING:Q20819 PaxDb:Q20819
EnsemblMetazoa:F55C5.5 GeneID:179683 KEGG:cel:CELE_F55C5.5
UCSC:F55C5.5 CTD:179683 WormBase:F55C5.5 InParanoid:Q20819
NextBio:906442 Uniprot:Q20819
Length = 316
Score = 385 (140.6 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 88/233 (37%), Positives = 133/233 (57%)
Query: 15 ASANQLTTNKSLLGKLRKKTGYSFTNCKKAL-DLNEQDLGKAEKWLQEQAKELGWAKASK 73
A A + + ++L+ LRKKTGYS+ NC+KAL E D+ A KWL+E A + GWAKA+K
Sbjct: 19 AEAEKKVSKEALMA-LRKKTGYSYVNCRKALIQFGENDMDSAVKWLKEAAAKEGWAKAAK 77
Query: 74 LAGRKTSQGLISIAVEGKHATMVEFNCETDFVARNKQFQGMAELISLACLNYTKTQVQPQ 133
L R TS GL+S+ + A +VE +CETDFVAR+ F+ + IS + L K + Q
Sbjct: 78 LGTRVTSNGLVSVVTDNSTAAVVELSCETDFVARSGAFKDLLSNISNSVL--AKAKPQSI 135
Query: 134 EPFAKVFLDTAQLQSLAGPENKSLADHVAILISSVGENLVLRRAACVTVNEDHDVAGFTH 193
+K+ T L L + K++ + +++ I +GEN+ +RR E + G +H
Sbjct: 136 SSGSKLQEFTYDLGDLTDSDGKNMREVLSLSIGKLGENMTVRRVKAFKAPEGTTLFGASH 195
Query: 194 PSPGLEHTGPILGKFGSLMVYQDLKTGDKQQNVQNVARQLCQHVIGMNPKSIG 246
P G + P +G+F SL+ G Q +A Q+CQH+IGM+P+S+G
Sbjct: 196 PKDGTDDI-P-MGRFISLIALNQSSPGSISS--QQLAGQICQHIIGMSPESLG 244
Score = 45 (20.9 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 262 MYHQEFLLDPTQYVGEVIVAAGIKPVEFLR 291
+ Q F+L+P+Q V E + + ++F+R
Sbjct: 281 LLRQAFMLNPSQSVHEYLKSHNANILDFVR 310
>UNIPROTKB|C9JT21 [details] [associations]
symbol:TSFM "Elongation factor Ts" species:9606 "Homo
sapiens" [GO:0005622 "intracellular" evidence=IEA] [GO:0003746
"translation elongation factor activity" evidence=IEA]
HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005622 GO:GO:0003746 EMBL:AC025165 SUPFAM:SSF46934
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
HOGENOM:HOG000220988 HGNC:HGNC:12367 IPI:IPI00916739
ProteinModelPortal:C9JT21 SMR:C9JT21 STRING:C9JT21 PRIDE:C9JT21
Ensembl:ENST00000457189 ArrayExpress:C9JT21 Bgee:C9JT21
Uniprot:C9JT21
Length = 169
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 76/167 (45%), Positives = 112/167 (67%)
Query: 29 KLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKELGWAKASKLAGRKTSQGLISIAV 88
KLR+KTGYSF NCKKAL+ DL +AE WL ++A++ GW+KA+KL GRKT +GLI +
Sbjct: 2 KLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKAAKLQGRKTKEGLIGLLQ 61
Query: 89 EGKHATMVEFNCETDFVARNKQFQGMAELISLACLNYTKTQVQPQEPFAKVFLDTAQLQS 148
EG +VE NCETDFV+RN +FQ + + ++L + + +T ++K FL++++L
Sbjct: 62 EGNTTVLVEVNCETDFVSRNLKFQLLVQQVALGTMMHCQTLKDQPSAYSKGFLNSSELSG 121
Query: 149 L-AGPENK-SLADHVAILISSVGENLVLRRAACVTVNEDHDVAGFTH 193
L AGP+ + SL D +A+ I +GEN++L+RAA V V V + H
Sbjct: 122 LPAGPDREGSLKDQLALAIGKLGENMILKRAAWVKVPSGFYVGSYVH 168
>UNIPROTKB|F8VS27 [details] [associations]
symbol:TSFM "Elongation factor Ts, mitochondrial"
species:9606 "Homo sapiens" [GO:0003746 "translation elongation
factor activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005739 GO:GO:0003746 EMBL:AC025165 SUPFAM:SSF46934
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
HGNC:HGNC:12367 IPI:IPI01021816 ProteinModelPortal:F8VS27
SMR:F8VS27 Ensembl:ENST00000550559 ArrayExpress:F8VS27 Bgee:F8VS27
Uniprot:F8VS27
Length = 230
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 70/152 (46%), Positives = 103/152 (67%)
Query: 22 TNKSLLGKLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKELGWAKASKLAGRKTSQ 81
++K LL KLR+KTGYSF NCKKAL+ DL +AE WL ++A++ GW+KA+KL GRKT +
Sbjct: 45 SSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKAAKLQGRKTKE 104
Query: 82 GLISIAVEGKHATMVEFNCETDFVARNKQFQGMAELISLACLNYTKTQVQPQEPFAKVFL 141
GLI + EG +VE NCETDFV+RN +FQ + + ++L + + +T ++K FL
Sbjct: 105 GLIGLLQEGNTTVLVEVNCETDFVSRNLKFQLLVQQVALGTMMHCQTLKDQPSAYSKGFL 164
Query: 142 DTAQLQSL-AGPENK-SLADHVAILISSVGEN 171
++++L L AGP+ + SL D +A+ I S N
Sbjct: 165 NSSELSGLPAGPDREGSLKDQLALAIGSQARN 196
>UNIPROTKB|F8VPA7 [details] [associations]
symbol:TSFM "Elongation factor Ts, mitochondrial"
species:9606 "Homo sapiens" [GO:0003746 "translation elongation
factor activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005739 GO:GO:0003746 EMBL:AC025165 SUPFAM:SSF46934
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
HGNC:HGNC:12367 IPI:IPI01022674 ProteinModelPortal:F8VPA7
SMR:F8VPA7 Ensembl:ENST00000548851 ArrayExpress:F8VPA7 Bgee:F8VPA7
Uniprot:F8VPA7
Length = 200
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 68/146 (46%), Positives = 101/146 (69%)
Query: 22 TNKSLLGKLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKELGWAKASKLAGRKTSQ 81
++K LL KLR+KTGYSF NCKKAL+ DL +AE WL ++A++ GW+KA+KL GRKT +
Sbjct: 45 SSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKAAKLQGRKTKE 104
Query: 82 GLISIAVEGKHATMVEFNCETDFVARNKQFQGMAELISLACLNYTKTQVQPQEPFAKVFL 141
GLI + EG +VE NCETDFV+RN +FQ + + ++L + + +T ++K FL
Sbjct: 105 GLIGLLQEGNTTVLVEVNCETDFVSRNLKFQLLVQQVALGTMMHCQTLKDQPSAYSKGFL 164
Query: 142 DTAQLQSL-AGPENK-SLADHVAILI 165
++++L L AGP+ + SL D +A+ I
Sbjct: 165 NSSELSGLPAGPDREGSLKDQLALAI 190
>UNIPROTKB|C9JG32 [details] [associations]
symbol:TSFM "Elongation factor Ts" species:9606 "Homo
sapiens" [GO:0005622 "intracellular" evidence=IEA] [GO:0003746
"translation elongation factor activity" evidence=IEA]
HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005622 GO:GO:0003746 EMBL:AC025165 SUPFAM:SSF46934
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
HGNC:HGNC:12367 IPI:IPI01022674 ProteinModelPortal:C9JG32
SMR:C9JG32 STRING:C9JG32 PRIDE:C9JG32 Ensembl:ENST00000434359
HOGENOM:HOG000152327 ArrayExpress:C9JG32 Bgee:C9JG32 Uniprot:C9JG32
Length = 140
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 65/139 (46%), Positives = 96/139 (69%)
Query: 29 KLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKELGWAKASKLAGRKTSQGLISIAV 88
KLR+KTGYSF NCKKAL+ DL +AE WL ++A++ GW+KA+KL GRKT +GLI +
Sbjct: 2 KLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKAAKLQGRKTKEGLIGLLQ 61
Query: 89 EGKHATMVEFNCETDFVARNKQFQGMAELISLACLNYTKTQVQPQEPFAKVFLDTAQLQS 148
EG +VE NCETDFV+RN +FQ + + ++L + + +T ++K FL++++L
Sbjct: 62 EGNTTVLVEVNCETDFVSRNLKFQLLVQQVALGTMMHCQTLKDQPSAYSKGFLNSSELSG 121
Query: 149 L-AGPENK-SLADHVAILI 165
L AGP+ + SL D +A+ I
Sbjct: 122 LPAGPDREGSLKDQLALAI 140
>UNIPROTKB|I3LF68 [details] [associations]
symbol:TSFM "Elongation factor Ts, mitochondrial"
species:9823 "Sus scrofa" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003746 "translation
elongation factor activity" evidence=IEA] HAMAP:MF_00050
InterPro:IPR001816 InterPro:IPR009060 InterPro:IPR014039
InterPro:IPR018101 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005739 GO:GO:0005634 GO:GO:0003746 SUPFAM:SSF46934
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
GeneTree:ENSGT00390000016293 Ensembl:ENSSSCT00000024924 OMA:AGPEHEG
Uniprot:I3LF68
Length = 162
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 61/129 (47%), Positives = 86/129 (66%)
Query: 13 FHAS-ANQLTTNKSLLGKLRKKTGYSFTNCKKALDLNE--QDLGKAEKWLQEQAKELGWA 69
FHA ++K LL KLR+KTGYSF NCKKAL L DL +AE WL +QA++ GW+
Sbjct: 34 FHAGPCLSSASSKELLMKLRRKTGYSFVNCKKALXLETCCGDLKQAESWLHKQAQKEGWS 93
Query: 70 KASKLAGRKTSQGLISIAVEGKHATMVEFNCETDFVARNKQFQGMAELISLACLNYTKTQ 129
KA++L GRKT +GLI + EG + +VE NCETDFV+RN +FQ + + ++L L + ++
Sbjct: 94 KAARLHGRKTKEGLIGLLQEGNTSVLVEVNCETDFVSRNLKFQQLVQQVALGTLLHCQSL 153
Query: 130 VQPQEPFAK 138
P ++K
Sbjct: 154 KDPLSTYSK 162
>DICTYBASE|DDB_G0286399 [details] [associations]
symbol:tsfm "elongation factor Ts" species:44689
"Dictyostelium discoideum" [GO:0006414 "translational elongation"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003746
"translation elongation factor activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
dictyBase:DDB_G0286399 GO:GO:0005739 GenomeReviews:CM000153_GR
GO:GO:0003746 EMBL:AAFI02000085 SUPFAM:SSF46934 eggNOG:COG0264
KO:K02357 Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
TIGRFAMs:TIGR00116 RefSeq:XP_637727.1 ProteinModelPortal:Q54LV3
STRING:Q54LV3 EnsemblProtists:DDB0266366 GeneID:8625592
KEGG:ddi:DDB_G0286399 OMA:ILEMNSE ProtClustDB:CLSZ2846693
Uniprot:Q54LV3
Length = 355
Score = 222 (83.2 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 71/254 (27%), Positives = 130/254 (51%)
Query: 12 FFHASANQLTTNKSLLGKLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKELGWAKA 71
F S +++ L+ +LRKKT CKKAL + D+ A KWL E+ K A A
Sbjct: 36 FCTQSTSEVKVPTELVVQLRKKTQSPVQECKKALQASNNDMDGAIKWLLEKGK----ATA 91
Query: 72 SKLAGRKTSQGLISIAVE---GKHATMVEFNCETDFVARNKQFQGMAELISLACLNYTKT 128
KL R +++G+IS+ V+ GK A ++E N ETDFV+R F+ +A IS A L+ +
Sbjct: 92 EKLKSRVSAEGIISVLVDSGSGK-AVILEMNSETDFVSRGDIFRNLARDISKATLSNPIS 150
Query: 129 QVQPQEPFAKVFLDTAQLQSLA----------G-PENKSLADHVAILISSVGENLVLRRA 177
+ E + LD Q++++ G E ++ D + ++S + EN+V+RRA
Sbjct: 151 GGKLAEN-GILELDPTQVENIYPIKINITNEDGVAEEMTIKDSIVRIVSKLRENIVIRRA 209
Query: 178 ACVT-VNEDHD-----VAGFTHPSPGLEHTGPILGKFGSLMVYQDLKTGDKQQNVQNVAR 231
+ + +N +++ ++ + H S + +G+ GS++ ++ + +++ A
Sbjct: 210 SFIQPLNNNNNNSKSYISSYAHDSTSEKKD---VGRLGSIVQFEYQGDCNNMNSLKEFAN 266
Query: 232 QLCQHVIGMNPKSI 245
QL H++ +P +
Sbjct: 267 QLAIHIVSNSPSVV 280
>TIGR_CMR|SPO_1975 [details] [associations]
symbol:SPO_1975 "translation elongation factor Ts"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003746 SUPFAM:SSF46934
eggNOG:COG0264 KO:K02357 OMA:YLHGTRI ProtClustDB:PRK09377
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
TIGRFAMs:TIGR00116 HOGENOM:HOG000220987 RefSeq:YP_167210.1
ProteinModelPortal:Q5LRZ5 GeneID:3192723 KEGG:sil:SPO1975
PATRIC:23377281 Uniprot:Q5LRZ5
Length = 291
Score = 198 (74.8 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 56/154 (36%), Positives = 81/154 (52%)
Query: 25 SLLGKLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKELGWAKASKLAGRKTSQGLI 84
+L+ +LR TG + KKAL + D+ A WL+ + G AKA+K +GR ++GL+
Sbjct: 6 ALVKELRDSTGAGMMDAKKALTETDGDMEAAVDWLRTK----GLAKAAKKSGRTAAEGLV 61
Query: 85 SIAVEGKHATMVEFNCETDFVARNKQFQGMAELISLACLNYTKTQVQPQEPFAKVFLDTA 144
++ VEG VE N ETDFVA+N FQ M I+ A L A +D
Sbjct: 62 AVVVEGGKGVAVEVNSETDFVAKNSDFQEMVGKIAAAAL-------------AADDVDAL 108
Query: 145 QLQSLAGPENKSLADHVAILISSVGENLVLRRAA 178
L G KS+AD + I+++GEN+ +RR A
Sbjct: 109 LAADLGG---KSVADTLTAKIATIGENMSVRRLA 139
Score = 42 (19.8 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 265 QEFLLDPTQYVGEVIVAAGIKPVEFLR 291
Q+F+++P VG AG + F+R
Sbjct: 241 QQFVVNPDLTVGAAAAEAGAEITGFVR 267
>UNIPROTKB|J9JHC7 [details] [associations]
symbol:TSFM "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0003746 "translation elongation factor activity" evidence=IEA]
InterPro:IPR001816 InterPro:IPR014039 Pfam:PF00889 GO:GO:0005622
GO:GO:0003746 Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
GeneTree:ENSGT00390000016293 EMBL:AAEX03015399
Ensembl:ENSCAFT00000011570 OMA:ANDPWHE Uniprot:J9JHC7
Length = 172
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 54/162 (33%), Positives = 91/162 (56%)
Query: 136 FAKVFLDTAQLQSL-AGPENKS-LADHVAILISSVGENLVLRRAACVTVNEDHDVAGFTH 193
++K FL++++L L AGPE + L D +A+ I +GEN+ +RAA V V V + H
Sbjct: 6 YSKGFLNSSELSELPAGPEKEGCLKDQLALAIGKLGENMTCKRAAWVKVPAGFYVGSYVH 65
Query: 194 P---SPGLEHTGPILGKFGSLMVYQDLKTGDKQQNVQNVARQLCQHVIGMNPKSIGSXXX 250
SP L + LGK+G+L+V + T +++ +++++ R+L QHV+GM P S+GS
Sbjct: 66 GAMHSPSLHNLE--LGKYGALVVCE---TSERKASLEDLGRRLGQHVVGMAPLSVGSLDD 120
Query: 251 XXXXXXXXXXIMYHQEFLLDPTQYVGEVIVAAGIKPVEFLRF 292
M Q + LDP+ +G+ + G+ V+F+ F
Sbjct: 121 EPGGEAETK--MLSQPYFLDPSITLGKYVQPQGVSVVDFVWF 160
>TIGR_CMR|GSU_1920 [details] [associations]
symbol:GSU_1920 "translation elongation factor Ts"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 GO:GO:0003746
EMBL:AE017180 GenomeReviews:AE017180_GR SUPFAM:SSF46934
eggNOG:COG0264 HOGENOM:HOG000220986 KO:K02357 Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 TIGRFAMs:TIGR00116
ProtClustDB:PRK12332 RefSeq:NP_952969.1 ProteinModelPortal:P61333
SMR:P61333 GeneID:2685331 KEGG:gsu:GSU1920 PATRIC:22026705
OMA:EAREGII BioCyc:GSUL243231:GH27-1977-MONOMER Uniprot:P61333
Length = 216
Score = 171 (65.3 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 49/135 (36%), Positives = 70/135 (51%)
Query: 27 LGKLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKELGWAKASKLAGRKTSQGLIS- 85
+ +LRK TG +CKKAL DL +A +L+++ G A ASK AGR ++G +
Sbjct: 8 VNELRKITGAGLMDCKKALTETNGDLEQAVDYLRKK----GLAAASKKAGRAATEGAVGS 63
Query: 86 -IAVEGKHATMVEFNCETDFVARNKQFQGMAELISL----ACLNYTKTQVQPQEPFAKVF 140
I GK +VE NCETDFVARN FQ + I++ A Y + + P E +
Sbjct: 64 YIHAGGKIGVLVEVNCETDFVARNDNFQAFVKDIAMHIAAASPQYVRREEVPAELLEREK 123
Query: 141 -LDTAQLQSLAGPEN 154
+ A+ + PEN
Sbjct: 124 EIYRAKARETGKPEN 138
Score = 50 (22.7 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 147 QSLAGPENKSLADHVAILISSVGENLVLRRAACVTVNE 184
Q+ +K++ + ISS+GEN+ +RR A + E
Sbjct: 160 QNFVKDPDKTVQQFLNETISSIGENMSVRRFARFVLGE 197
>TAIR|locus:2136158 [details] [associations]
symbol:AT4G11120 species:3702 "Arabidopsis thaliana"
[GO:0003746 "translation elongation factor activity"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0006414
"translational elongation" evidence=IEA;ISS] HAMAP:MF_00050
InterPro:IPR001816 InterPro:IPR009060 InterPro:IPR014039
InterPro:IPR018101 Pfam:PF00889 PROSITE:PS01127 GO:GO:0005739
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161531 GO:GO:0003746
SUPFAM:SSF46934 EMBL:AF080120 EMBL:AL049876 eggNOG:COG0264
HOGENOM:HOG000220986 OMA:YLHGTRI Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 TIGRFAMs:TIGR00116 EMBL:BT015741
EMBL:BT020174 IPI:IPI00518106 PIR:T08191 RefSeq:NP_192850.2
UniGene:At.3293 ProteinModelPortal:Q5XF75 SMR:Q5XF75 STRING:Q5XF75
PaxDb:Q5XF75 PRIDE:Q5XF75 EnsemblPlants:AT4G11120.1 GeneID:826713
KEGG:ath:AT4G11120 GeneFarm:4380 TAIR:At4g11120 InParanoid:Q5XF75
PhylomeDB:Q5XF75 ProtClustDB:CLSN2680955 Genevestigator:Q5XF75
Uniprot:Q5XF75
Length = 395
Score = 204 (76.9 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 66/242 (27%), Positives = 122/242 (50%)
Query: 7 SFLARFFHASANQLTTNKSLLGKLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKEL 66
+F+ F + ++ SL+ +LR++T + K +L DL A+K L+++ K L
Sbjct: 58 NFIRSFSSEAPPAVSDQMSLIKQLRERTSAPIKDVKASLVECNWDLEAAQKDLRKRGKVL 117
Query: 67 GWAKASKLAGRKTSQGLISIAV-EGKHATMVEFNCETDFVARNKQFQGMAELISLACL-- 123
ASK + R ++G++++A EGK A ++E NCETDFVARN+ FQ +A ++ L
Sbjct: 118 ----ASKKSSRTAAEGMLAVAQNEGKVA-VIELNCETDFVARNEIFQYLALAMAKHALLV 172
Query: 124 NYTKTQVQPQEPFAKVFLDTAQLQSLAGPE---NKSLADHVAILISSVGENLVLRRAACV 180
+ QV PF + +L +L P+ ++++ V + + +GEN+ RR +
Sbjct: 173 ESSSQQVSGVFPFGPELFEEFKL-NLDHPKVNGETTVSNAVTEVAAIMGENVKFRRGFLM 231
Query: 181 TVNEDHDVAGFTHPSPGLEHTGPILGKFGSLMVYQDLKTGDKQQNVQNVARQLCQHVIGM 240
+ + ++ + H SP P LG+ ++ + + + +Q V +L HV+
Sbjct: 232 SKSSAGVLSAYLHTSPQ-----PGLGRIAGIVSLEVEGENTQLEAIQRVGSELAMHVVAA 286
Query: 241 NP 242
P
Sbjct: 287 KP 288
>TIGR_CMR|ECH_0515 [details] [associations]
symbol:ECH_0515 "translation elongation factor Ts"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0003746 SUPFAM:SSF46934
eggNOG:COG0264 HOGENOM:HOG000220986 KO:K02357 OMA:YLHGTRI
ProtClustDB:PRK09377 Gene3D:3.30.479.20 PANTHER:PTHR11741
SUPFAM:SSF54713 TIGRFAMs:TIGR00116 RefSeq:YP_507330.1
ProteinModelPortal:Q2GGV3 STRING:Q2GGV3 GeneID:3928034
KEGG:ech:ECH_0515 PATRIC:20576498
BioCyc:ECHA205920:GJNR-517-MONOMER Uniprot:Q2GGV3
Length = 288
Score = 198 (74.8 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 61/177 (34%), Positives = 96/177 (54%)
Query: 29 KLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKELGWAKASKLAGRKTSQGLISIAV 88
+LR TG +CK+AL+ D+ KA+ +L+EQ G AKA K + + S GL+++ V
Sbjct: 10 ELRNLTGAGVGDCKEALNSCGGDIEKAKNYLREQ----GIAKAYKKSTKDVSDGLVAVHV 65
Query: 89 EGKHATMVEFNCETDFVARNKQFQGMA-ELISLACLNYTKTQVQPQEPFAKVFLDTAQLQ 147
G ++E N ETDFVARN++FQ + L+SLA + V+ E F K +
Sbjct: 66 NGNQGAILEVNSETDFVARNEKFQKLVLNLVSLA----NQYAVEDIEDFLKH-------E 114
Query: 148 SLAGPENKSLADHVAILISSVGENLVLRRAACVTVNEDHDVAGFTHPSPGLEHTGPI 204
++G S+ D + I+ +GEN+ L + ++VN V G+ H SP + + G I
Sbjct: 115 YVSGT---SIHDEIMTNIAVIGENIHLNKIGYLSVNAGV-VGGYIH-SPVVNNLGKI 166
>TIGR_CMR|CBU_1385 [details] [associations]
symbol:CBU_1385 "translation elongation factor Ts"
species:227377 "Coxiella burnetii RSA 493" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 GO:GO:0003746
EMBL:AE016828 GenomeReviews:AE016828_GR SUPFAM:SSF46934
eggNOG:COG0264 KO:K02357 OMA:YLHGTRI ProtClustDB:PRK09377
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
TIGRFAMs:TIGR00116 HOGENOM:HOG000220987 EMBL:AF127534
RefSeq:NP_820374.1 ProteinModelPortal:Q9X5U9 SMR:Q9X5U9
PRIDE:Q9X5U9 GeneID:1209291 KEGG:cbu:CBU_1385 PATRIC:17931515
BioCyc:CBUR227377:GJ7S-1373-MONOMER Uniprot:Q9X5U9
Length = 296
Score = 164 (62.8 bits), Expect = 3.6e-14, Sum P(3) = 3.6e-14
Identities = 56/179 (31%), Positives = 89/179 (49%)
Query: 20 LTTNKSLLGK-LRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKELGWAKASKLAGRK 78
+TT ++ K LR++TG + CKKAL D+ A L ++ G AKA+K AG+
Sbjct: 1 MTTITPIMVKELRERTGAAVMACKKALQETNGDMEAAIDLL----RKAGDAKAAKRAGKT 56
Query: 79 TSQGLISIAV--EGKHATMVEFNCETDFVARNKQFQGMAELISLACLNYTKTQVQPQEPF 136
++G+I IA+ + K M E N ETDFVAR+ F A ++ +
Sbjct: 57 AAEGVIVIAISKDQKKGFMAEVNSETDFVARDTNFMAFASKVA-------------ERGL 103
Query: 137 AKVFLDTAQLQSLAGPENKS--LADHVAILISSVGENLVLRRAACVTVNEDHDVAGFTH 193
A+ D A +L N S + D L++ +GEN+ +RR A +++ D V ++H
Sbjct: 104 AEGVSDVAATLALPIEPNSSSTIEDERKALVNRIGENIQIRRVA--SLSSDGVVGHYSH 160
Score = 59 (25.8 bits), Expect = 3.6e-14, Sum P(3) = 3.6e-14
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 265 QEFLLDPTQYVGEVIVAAGIKPVEFLRF 292
Q F+ DP + VG+++ A K + FLRF
Sbjct: 244 QSFVKDPEKLVGDLLKAEKAKVLAFLRF 271
Score = 39 (18.8 bits), Expect = 3.6e-14, Sum P(3) = 3.6e-14
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 229 VARQLCQHVIGMNPKSIGS 247
+A+ L HV NP+++ +
Sbjct: 177 LAKGLAMHVAAFNPQAVSA 195
>TIGR_CMR|DET_0376 [details] [associations]
symbol:DET_0376 "translation elongation factor Ts,
putative" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003746 "translation elongation factor activity" evidence=ISS]
[GO:0006414 "translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01127 GO:GO:0005737 GO:GO:0003746 EMBL:CP000027
GenomeReviews:CP000027_GR SUPFAM:SSF46934 eggNOG:COG0264
HOGENOM:HOG000220986 KO:K02357 Gene3D:3.30.479.20 PANTHER:PTHR11741
SUPFAM:SSF54713 TIGRFAMs:TIGR00116 ProtClustDB:PRK12332 OMA:EAREGII
RefSeq:YP_181122.1 ProteinModelPortal:Q3Z9H7 STRING:Q3Z9H7
GeneID:3230302 KEGG:det:DET0376 PATRIC:21607821
BioCyc:DETH243164:GJNF-376-MONOMER Uniprot:Q3Z9H7
Length = 167
Score = 181 (68.8 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 54/166 (32%), Positives = 83/166 (50%)
Query: 20 LTTNKSLLGKLRKKTGYSFTNCKKAL-DLNEQDLGKAEKWLQEQAKELGWAKASKLAGRK 78
+ N + +LR+K G C+ AL D N G EK QE +E G KA+K A R+
Sbjct: 1 MAINAEQIKELREKCGAGVMECRNALMDSN----GNVEK-AQEILREKGLVKAAKKAERE 55
Query: 79 TSQGLIS--IAVEGKHATMVEFNCETDFVARNKQFQGMAELISLA----CLNYTKTQVQP 132
T QG++ I +G+ +VE NCETDFVAR F+ +A +++ C Y + +P
Sbjct: 56 TVQGIVESYIHTQGRIGALVELNCETDFVARTDAFKELAHNLAMQVAAMCPLYLSEEDRP 115
Query: 133 QEPFAKVFLDTAQLQSLAGPENKSLADHVAILISSVGENLVLRRAA 178
E + LQ +K++ + ++ VGEN+ L+R A
Sbjct: 116 AECEVEAENACLLLQPYIKDLSKTINGLIIETVAKVGENIRLKRFA 161
>TIGR_CMR|BA_3964 [details] [associations]
symbol:BA_3964 "translation elongation factor Ts"
species:198094 "Bacillus anthracis str. Ames" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003746
SUPFAM:SSF46934 eggNOG:COG0264 KO:K02357 OMA:YLHGTRI
ProtClustDB:PRK09377 Gene3D:3.30.479.20 PANTHER:PTHR11741
SUPFAM:SSF54713 TIGRFAMs:TIGR00116 RefSeq:NP_846207.1
RefSeq:YP_020603.1 RefSeq:YP_029928.1 ProteinModelPortal:Q81WK9
PRIDE:Q81WK9 DNASU:1086812 EnsemblBacteria:EBBACT00000010254
EnsemblBacteria:EBBACT00000015045 EnsemblBacteria:EBBACT00000019672
GeneID:1086812 GeneID:2819542 GeneID:2848103 KEGG:ban:BA_3964
KEGG:bar:GBAA_3964 KEGG:bat:BAS3677 HOGENOM:HOG000220987
BioCyc:BANT260799:GJAJ-3735-MONOMER
BioCyc:BANT261594:GJ7F-3852-MONOMER Uniprot:Q81WK9
Length = 295
Score = 185 (70.2 bits), Expect = 6.0e-14, Sum P(2) = 6.0e-14
Identities = 59/170 (34%), Positives = 90/170 (52%)
Query: 26 LLGKLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKELGWAKASKLAGRKTSQGLIS 85
++ +LR+KTG +CKKAL D+ KA +L+E+ G AKA+K A R ++GL
Sbjct: 7 MVKELREKTGAGMMDCKKALTETNGDMEKAIDFLREK----GIAKAAKKADRIAAEGLTF 62
Query: 86 IAVEGKHATMVEFNCETDFVARNKQFQGMAELISLACLNYTKTQVQPQEPFAKVFLDTAQ 145
I G ++E N ETDFVA+N+ FQ + + ++ L +P A V + A
Sbjct: 63 IETNGNDGLILELNSETDFVAKNEGFQTLIKELAAHLL--------ANKP-ANV--EEAM 111
Query: 146 LQSLAGPEN-KSLADHVAILISSVGENLVLRRAACVTVNEDHDVAG-FTH 193
Q++ EN K + +H+ I+ +GE L LRR V+ D D G + H
Sbjct: 112 AQTM---ENGKKVEEHINEAIAKIGEKLTLRRFEIVS-KTDADAFGAYLH 157
Score = 38 (18.4 bits), Expect = 6.0e-14, Sum P(2) = 6.0e-14
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 230 ARQLCQHVIGMNPKSI 245
A+ + H+ +NPK I
Sbjct: 177 AKDVAMHIAAVNPKYI 192
>TIGR_CMR|CHY_1786 [details] [associations]
symbol:CHY_1786 "translation elongation factor Ts"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003746 "translation elongation factor activity" evidence=ISS]
[GO:0006414 "translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0003746 SUPFAM:SSF46934
eggNOG:COG0264 HOGENOM:HOG000220986 KO:K02357 Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 TIGRFAMs:TIGR00116
RefSeq:YP_360606.1 ProteinModelPortal:Q3AB78 SMR:Q3AB78
STRING:Q3AB78 PRIDE:Q3AB78 GeneID:3728651 KEGG:chy:CHY_1786
PATRIC:21276683 OMA:YIHTGAR ProtClustDB:PRK12332
BioCyc:CHYD246194:GJCN-1785-MONOMER Uniprot:Q3AB78
Length = 217
Score = 159 (61.0 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 40/119 (33%), Positives = 68/119 (57%)
Query: 26 LLGKLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKELGWAKASKLAGRKTSQGLIS 85
++ +LR++TG +CK+AL+ D+ KA + L+++ G A A+K AGR ++G++
Sbjct: 6 MVKELRERTGAGMMDCKRALEEANGDMEKAIEILRQK----GLAAAAKKAGRIATEGVVE 61
Query: 86 IAVEG--KHATMVEFNCETDFVARNKQFQGMAELISL----ACLNYTKTQVQPQEPFAK 138
+ G + +VE NCETDFVA+ +F+ A I++ A Y + + PQE K
Sbjct: 62 AYIHGGGRIGVLVEINCETDFVAKTDEFKSFARDIAMQIAAAKPEYVRREDVPQEVIEK 120
Score = 37 (18.1 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 138 KVFLDTAQLQS--LAGPENKSLADHVAILISSVGENLVLRR 176
K F + L+ + P+ ++ D + I+ +GEN+ +RR
Sbjct: 149 KFFKEVCLLEQPFIKNPDI-TVKDLLTEKIAKIGENINIRR 188
>UNIPROTKB|P0A6P1 [details] [associations]
symbol:tsf species:83333 "Escherichia coli K-12"
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0006412 "translation" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006414 "translational
elongation" evidence=IEA] [GO:0003746 "translation elongation
factor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] HAMAP:MF_00050 InterPro:IPR000449
InterPro:IPR001816 InterPro:IPR009060 InterPro:IPR014039
InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126
PROSITE:PS01127 GO:GO:0005737 GO:GO:0016020 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0008270 GO:GO:0003746 EMBL:U70214 SUPFAM:SSF46934 EMBL:D13334
eggNOG:COG0264 HOGENOM:HOG000220986 KO:K02357 OMA:YLHGTRI
ProtClustDB:PRK09377 Gene3D:3.30.479.20 PANTHER:PTHR11741
SUPFAM:SSF54713 TIGRFAMs:TIGR00116 EMBL:V00343 PIR:A03525
RefSeq:NP_414712.1 RefSeq:YP_488472.1 PDB:1EFU PDB:3MMP PDBsum:1EFU
PDBsum:3MMP ProteinModelPortal:P0A6P1 SMR:P0A6P1 DIP:DIP-31835N
IntAct:P0A6P1 MINT:MINT-1273899 PhosSite:P0810442
SWISS-2DPAGE:P0A6P1 PaxDb:P0A6P1 PRIDE:P0A6P1
EnsemblBacteria:EBESCT00000002436 EnsemblBacteria:EBESCT00000016027
GeneID:12931801 GeneID:944866 KEGG:ecj:Y75_p0166 KEGG:eco:b0170
PATRIC:32115449 EchoBASE:EB1026 EcoGene:EG11033
BioCyc:EcoCyc:EG11033-MONOMER BioCyc:ECOL316407:JW0165-MONOMER
EvolutionaryTrace:P0A6P1 Genevestigator:P0A6P1 Uniprot:P0A6P1
Length = 283
Score = 156 (60.0 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 38/107 (35%), Positives = 61/107 (57%)
Query: 25 SLLGKLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKELGWAKASKLAGRKTSQGLI 84
SL+ +LR++TG +CKKAL E + G E ++ K G KA+K AG + G+I
Sbjct: 7 SLVKELRERTGAGMMDCKKAL--TEAN-GDIELAIENMRKS-GAIKAAKKAGNVAADGVI 62
Query: 85 SIAVEGKHATMVEFNCETDFVARNKQFQGMAELISLACLNYTKTQVQ 131
++G + ++E NC+TDFVA++ FQ A+ + A + T V+
Sbjct: 63 KTKIDGNYGIILEVNCQTDFVAKDAGFQAFADKVLDAAVAGKITDVE 109
Score = 47 (21.6 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 8/28 (28%), Positives = 18/28 (64%)
Query: 265 QEFLLDPTQYVGEVIVAAGIKPVEFLRF 292
Q F+++P++ VG+++ + F+RF
Sbjct: 232 QPFVMEPSKTVGQLLKEHNAEVTGFIRF 259
>TIGR_CMR|CJE_1315 [details] [associations]
symbol:CJE_1315 "translation elongation factor Ts"
species:195099 "Campylobacter jejuni RM1221" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 GO:GO:0003746
EMBL:CP000025 GenomeReviews:CP000025_GR SUPFAM:SSF46934
eggNOG:COG0264 KO:K02357 OMA:YLHGTRI ProtClustDB:PRK09377
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
TIGRFAMs:TIGR00116 HOGENOM:HOG000220987 RefSeq:YP_179302.1
ProteinModelPortal:Q5HTT3 STRING:Q5HTT3 GeneID:3231822
KEGG:cjr:CJE1315 PATRIC:20044430
BioCyc:CJEJ195099:GJC0-1341-MONOMER Uniprot:Q5HTT3
Length = 357
Score = 171 (65.3 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 54/171 (31%), Positives = 86/171 (50%)
Query: 25 SLLGKLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKELGWAKASKLAGRKTSQGLI 84
+++ +LR+ TG +CK AL D KA + L+E K LG KA+K A R ++GL+
Sbjct: 7 AMVKELRESTGAGMMDCKNALSETNGDFDKAVQLLRE--KGLG--KAAKKADRLAAEGLV 62
Query: 85 SIAVEGKH--ATMVEFNCETDFVARNKQFQGMAELISLACLNYTKTQVQPQEPFAKVFLD 142
S+ V AT+ E N ETDFVA+N QF +A T +Q + L
Sbjct: 63 SVKVSDDFTSATVSEINSETDFVAKNDQF--------IALTKDTTAHIQSNSLQSVEELH 114
Query: 143 TAQLQSLAGPENKSLADHVAILISSVGENLVLRRAACVTVNEDHDVAGFTH 193
++ + + +++ I+++GENLV+RR A + + V G+ H
Sbjct: 115 SSTINGV------KFEEYLKSQIATIGENLVVRRFATLKAGANGVVNGYIH 159
>POMBASE|SPBC800.07c [details] [associations]
symbol:tsf1 "mitochondrial translation elongation factor
EF-Ts Tsf1" species:4896 "Schizosaccharomyces pombe" [GO:0003746
"translation elongation factor activity" evidence=IMP] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005525 "GTP binding" evidence=IC] [GO:0005759 "mitochondrial
matrix" evidence=IGI] [GO:0006414 "translational elongation"
evidence=IGI] [GO:0032543 "mitochondrial translation" evidence=NAS]
HAMAP:MF_00050 InterPro:IPR001816 InterPro:IPR014039 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 PomBase:SPBC800.07c GO:GO:0005525
GO:GO:0005759 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003746
GO:GO:0005085 GO:GO:0032543 eggNOG:COG0264 KO:K02357
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
RefSeq:NP_595108.1 HSSP:P43895 ProteinModelPortal:Q9HGL5
STRING:Q9HGL5 EnsemblFungi:SPBC800.07c.1 GeneID:2540692
KEGG:spo:SPBC800.07c OrthoDB:EOG49W5R5 NextBio:20801816
Uniprot:Q9HGL5
Length = 299
Score = 168 (64.2 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 61/244 (25%), Positives = 113/244 (46%)
Query: 18 NQLTTNKSLLGKLRKKTGYSFTNCKKALD-LNEQDLGKAEKWLQEQAKELGWAKASKLAG 76
++L + + + KLR +T S K++++ +L A + L+++ + G A K
Sbjct: 28 SKLPSKLADIKKLRSETNASMDLVKQSVEEAGVGNLELAREILKKKIVQRGGKLAEKSKN 87
Query: 77 RKTSQGLI--SIAVEGKHATMVEFNCETDFVARNKQFQGMAELISLACLNYTKTQVQPQE 134
R +G I I+ +G+ A M E NCE+DFVA+ FQ +A I+ L+Y T
Sbjct: 88 RTAKEGWIIQCISEDGRKAVMAEINCESDFVAQTTPFQDLARRIASTFLHYLPTNHSSYS 147
Query: 135 PFAKVFLDTAQLQSLAGPE----------NKSLADHVAILISSVGENLVLRRAACVTVNE 184
A + + + Q+ N SL + + + S GE + ++R C+
Sbjct: 148 VEATLKNEILKHQAYVSKNHEANEKDVSSNVSLEEEIVKMTSFTGEKVQVQRLHCMNARV 207
Query: 185 DHDVAG-FTHPSPGLEHTGPI--LGKFGSLM-VYQDLKTGDKQQNVQNVARQLCQHVIGM 240
G F+H G + + P+ LG+ GS++ + DL T ++ + N Q+ + ++
Sbjct: 208 PSTAIGIFSH---GAKQSSPLQQLGRIGSMVQINSDLST---RKGLSN---QIAKEIVAQ 258
Query: 241 NPKS 244
+P S
Sbjct: 259 DPSS 262
>TIGR_CMR|NSE_0947 [details] [associations]
symbol:NSE_0947 "translation elongation factor Ts"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR001816 InterPro:IPR009060 InterPro:IPR014039
InterPro:IPR018101 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005737 GO:GO:0003746 SUPFAM:SSF46934 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0264 HOGENOM:HOG000220986
KO:K02357 OMA:YLHGTRI ProtClustDB:PRK09377 Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 TIGRFAMs:TIGR00116
RefSeq:YP_506811.1 STRING:Q2GCI5 GeneID:3932029 KEGG:nse:NSE_0947
PATRIC:22681873 BioCyc:NSEN222891:GHFU-949-MONOMER Uniprot:Q2GCI5
Length = 290
Score = 166 (63.5 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 55/179 (30%), Positives = 83/179 (46%)
Query: 27 LGKLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKELGWAKASKLAGRKTSQGLISI 86
L L K+T +CK+AL DL +A + L KELG A + K A R G++
Sbjct: 9 LKSLSKETSAGLVHCKQALSEAHGDLTRAREIL----KELGHAVSVKKANRGARDGVVGA 64
Query: 87 AVEGKHATMVEFNCETDFVARNKQFQGMAE-LISLACLNYTKTQVQPQEPFAKVFLDTAQ 145
GK ++E NCETDFVARN++FQ A+ ++ AC AKV +
Sbjct: 65 LSSGKFGVILELNCETDFVARNEKFQQFAQSVLEAACA-------------AKV-KSVEE 110
Query: 146 LQSLAGPENKSLADHVAILISSVGENLVLRRAACVTVNEDHDVAGFTHPSPGLEHTGPI 204
S P + + D + ++ EN+VL R V++ + + H + E+ G I
Sbjct: 111 CLSTPLPGGQKVRDAIVEQVAVFRENIVLSRCVTYEVSQSGLLGVYVH-NKYTENLGKI 168
>UNIPROTKB|Q9KPV3 [details] [associations]
symbol:tsf "Elongation factor Ts" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003746 SUPFAM:SSF46934
eggNOG:COG0264 KO:K02357 OMA:YLHGTRI ProtClustDB:PRK09377
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
TIGRFAMs:TIGR00116 PIR:A82100 RefSeq:NP_231890.1
ProteinModelPortal:Q9KPV3 PRIDE:Q9KPV3 DNASU:2613181 GeneID:2613181
KEGG:vch:VC2259 PATRIC:20083561 Uniprot:Q9KPV3
Length = 280
Score = 148 (57.2 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 44/125 (35%), Positives = 67/125 (53%)
Query: 20 LTTNKSLLGKLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKELGWAKASKLAGRKT 79
+ +L+ +LR++TG CKKAL D+ A E ++ G AKA+K AG
Sbjct: 1 MAVTAALVKELRERTGAGMMECKKALVETNGDIELAI----ENMRKSGAAKAAKKAGNIA 56
Query: 80 SQGLISIAVEGKH-ATMVEFNCETDFVARNKQFQGMAELISLACL--NYTKTQVQPQEPF 136
++G I I EG+ A +VE NC+TDFVA++ F A ++ A L + ++Q Q
Sbjct: 57 AEGTIMIK-EGEGIAALVEVNCQTDFVAKDSNFVAFANQVTDAALASKASVEELQAQFEE 115
Query: 137 AKVFL 141
A+V L
Sbjct: 116 ARVAL 120
Score = 50 (22.7 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 265 QEFLLDPTQYVGEVIVAAGIKPVEFLR 291
Q F+++P + VGE++ G F+R
Sbjct: 229 QPFVMEPKKTVGEILAEKGATVSAFIR 255
>TIGR_CMR|VC_2259 [details] [associations]
symbol:VC_2259 "elongation factor Ts" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003746 "translation elongation
factor activity" evidence=ISS] [GO:0006414 "translational
elongation" evidence=ISS] HAMAP:MF_00050 InterPro:IPR000449
InterPro:IPR001816 InterPro:IPR009060 InterPro:IPR014039
InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126
PROSITE:PS01127 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003746 SUPFAM:SSF46934
eggNOG:COG0264 KO:K02357 OMA:YLHGTRI ProtClustDB:PRK09377
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
TIGRFAMs:TIGR00116 PIR:A82100 RefSeq:NP_231890.1
ProteinModelPortal:Q9KPV3 PRIDE:Q9KPV3 DNASU:2613181 GeneID:2613181
KEGG:vch:VC2259 PATRIC:20083561 Uniprot:Q9KPV3
Length = 280
Score = 148 (57.2 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 44/125 (35%), Positives = 67/125 (53%)
Query: 20 LTTNKSLLGKLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKELGWAKASKLAGRKT 79
+ +L+ +LR++TG CKKAL D+ A E ++ G AKA+K AG
Sbjct: 1 MAVTAALVKELRERTGAGMMECKKALVETNGDIELAI----ENMRKSGAAKAAKKAGNIA 56
Query: 80 SQGLISIAVEGKH-ATMVEFNCETDFVARNKQFQGMAELISLACL--NYTKTQVQPQEPF 136
++G I I EG+ A +VE NC+TDFVA++ F A ++ A L + ++Q Q
Sbjct: 57 AEGTIMIK-EGEGIAALVEVNCQTDFVAKDSNFVAFANQVTDAALASKASVEELQAQFEE 115
Query: 137 AKVFL 141
A+V L
Sbjct: 116 ARVAL 120
Score = 50 (22.7 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 265 QEFLLDPTQYVGEVIVAAGIKPVEFLR 291
Q F+++P + VGE++ G F+R
Sbjct: 229 QPFVMEPKKTVGEILAEKGATVSAFIR 255
>TIGR_CMR|APH_0398 [details] [associations]
symbol:APH_0398 "translation elongation factor Ts"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 GO:GO:0003746
EMBL:CP000235 GenomeReviews:CP000235_GR SUPFAM:SSF46934
RefSeq:YP_505003.1 ProteinModelPortal:Q2GKU8 STRING:Q2GKU8
GeneID:3930974 KEGG:aph:APH_0398 PATRIC:20949404 eggNOG:COG0264
HOGENOM:HOG000220986 KO:K02357 OMA:YLHGTRI ProtClustDB:PRK09377
BioCyc:APHA212042:GHPM-426-MONOMER Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 TIGRFAMs:TIGR00116 Uniprot:Q2GKU8
Length = 287
Score = 158 (60.7 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 46/168 (27%), Positives = 84/168 (50%)
Query: 26 LLGKLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKELGWAKASKLAGRKTSQGLIS 85
++ +LR+ TG +CK+AL+ D+ KA ++L+E+ G +KA K + R + GL++
Sbjct: 7 VIKELRQITGAGIGDCKEALESCSGDMDKAREYLREK----GLSKAYKKSHRDVADGLVA 62
Query: 86 IAVEGKHATMVEFNCETDFVARNKQFQGMAELISLACLNYTKTQVQPQEPFAKVFLDTAQ 145
+ EG +++ ETDFVARN++F+ +A + Y V+ E F
Sbjct: 63 VFAEGDVGAILKLGSETDFVARNEKFRSLALGLVRGLYGYG---VEDLEGF--------- 110
Query: 146 LQSLAGPENKSLADHVAILISSVGENLVLRRAACVTVNEDHDVAGFTH 193
S + + +AD + + +GEN+VL V ++ + + H
Sbjct: 111 --SASSYDGSRVADEIVAAAAVLGENVVLSGVGFVKLSGPGVIGSYVH 156
>UNIPROTKB|Q10788 [details] [associations]
symbol:tsf "Elongation factor Ts" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005829 GO:GO:0005886
GO:GO:0040007 GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0003746 EMBL:BX842581
SUPFAM:SSF46934 eggNOG:COG0264 HOGENOM:HOG000220986 KO:K02357
OMA:YLHGTRI ProtClustDB:PRK09377 Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 TIGRFAMs:TIGR00116 PIR:D70925
RefSeq:NP_217405.1 RefSeq:NP_337468.1 RefSeq:YP_006516342.1
ProteinModelPortal:Q10788 SMR:Q10788 PRIDE:Q10788
EnsemblBacteria:EBMYCT00000001377 EnsemblBacteria:EBMYCT00000071329
GeneID:13317682 GeneID:888187 GeneID:925323 KEGG:mtc:MT2957
KEGG:mtu:Rv2889c KEGG:mtv:RVBD_2889c PATRIC:18128272
TubercuList:Rv2889c Uniprot:Q10788
Length = 271
Score = 155 (59.6 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 49/151 (32%), Positives = 79/151 (52%)
Query: 29 KLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQ-EQAKELGWAKASKLAGRKTSQGLISIA 87
+LR+ TG CK AL + D KA + L+ + AK++G K A R T++GL++
Sbjct: 11 RLRELTGAGMLACKNALAETDGDFDKAVEALRIKGAKDVG-----KRAERATAEGLVA-- 63
Query: 88 VEGKHATMVEFNCETDFVARNKQFQGMAELISLACLNYTKTQVQPQEPFAKVFLDTAQLQ 147
K ++E NCETDFVA+N +FQ +A+ + A +P + +D +
Sbjct: 64 --AKDGALIELNCETDFVAKNAEFQTLADQVVAAA-----AAAKPAD------VDALKGA 110
Query: 148 SLAGPENKSLADHVAILISSVGENLVLRRAA 178
S+ +K++ +A L + +GE L LRR A
Sbjct: 111 SIG---DKTVEQAIAELSAKIGEKLELRRVA 138
>TAIR|locus:2119946 [details] [associations]
symbol:emb2726 "embryo defective 2726" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003746 "translation elongation factor activity"
evidence=IEA;ISS] [GO:0006414 "translational elongation"
evidence=IEA;ISS] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0016117 "carotenoid biosynthetic
process" evidence=RCA] [GO:0019288 "isopentenyl diphosphate
biosynthetic process, mevalonate-independent pathway" evidence=RCA]
[GO:0034660 "ncRNA metabolic process" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR003029
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00575 Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126
PROSITE:PS01127 PROSITE:PS50126 GO:GO:0046686 GO:GO:0009570
EMBL:CP002687 EMBL:AL078470 EMBL:AL161574 GO:GO:0009941
GO:GO:0003746 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
SUPFAM:SSF46934 InterPro:IPR022967 SMART:SM00316 KO:K02357
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
TIGRFAMs:TIGR00116 HSSP:P43895 EMBL:AY056792 IPI:IPI00541725
PIR:T08961 RefSeq:NP_567820.1 UniGene:At.21764
ProteinModelPortal:Q9SZD6 SMR:Q9SZD6 STRING:Q9SZD6 PRIDE:Q9SZD6
ProMEX:Q9SZD6 EnsemblPlants:AT4G29060.1 GeneID:829027
KEGG:ath:AT4G29060 TAIR:At4g29060 HOGENOM:HOG000244107
InParanoid:Q9SZD6 OMA:DDLAMQV PhylomeDB:Q9SZD6
Genevestigator:Q9SZD6 Uniprot:Q9SZD6
Length = 953
Score = 155 (59.6 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 39/116 (33%), Positives = 69/116 (59%)
Query: 25 SLLGKLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKELGWAKASKLAGRKTSQGLI 84
+L+ +LR++TG +CK AL +E D+ KA+++L+++ G A A K A R TS+G I
Sbjct: 522 ALVKQLREETGAGMMDCKNALSESEGDMVKAQEYLRKK----GLASADKKASRATSEGRI 577
Query: 85 SIAV-EGKHATMVEFNCETDFVARNKQFQGMAELISL---AC--LNYTKTQVQPQE 134
+ + + ++E NCETDFV+R F+ + + +++ AC + Y T+ +E
Sbjct: 578 GAYIHDSRIGVLLEVNCETDFVSRGDIFKELVDDLAMQVAACPQVEYLVTEDVSEE 633
Score = 153 (58.9 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 39/118 (33%), Positives = 66/118 (55%)
Query: 15 ASANQLTTNKSLLGKLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKELGWAKASKL 74
AS + +L+ +LR++TG +CKKAL DL KA+++L+++ G + A K
Sbjct: 750 ASPPTTVVSAALVKQLREETGAGMMDCKKALAATGGDLEKAQEFLRKK----GLSSADKK 805
Query: 75 AGRKTSQGLISIAV-EGKHATMVEFNCETDFVARNKQFQGMAELISLACLNYTKTQVQ 131
+ R S+G I + + + ++E NCETDFV R+++F+ + + LA QVQ
Sbjct: 806 SSRLASEGRIGSYIHDSRIGVLIEVNCETDFVGRSEKFKELVD--DLAMQAVANPQVQ 861
Score = 48 (22.0 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 159 DHVAILISSVGENLVLRRAACVTVNEDH 186
D V ++++GEN+ +RR T+ ED+
Sbjct: 926 DLVKQTVATLGENIKVRRFVKFTLGEDN 953
Score = 40 (19.1 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 159 DHVAILISSVGENLVLRRAACVTVNE 184
D V I+++GEN+ ++R T+ E
Sbjct: 688 DLVKQRIATIGENIKVKRFVRYTLGE 713
>TIGR_CMR|CPS_1554 [details] [associations]
symbol:CPS_1554 "translation elongation factor Ts"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 GO:GO:0003746
EMBL:CP000083 GenomeReviews:CP000083_GR SUPFAM:SSF46934
eggNOG:COG0264 HOGENOM:HOG000220986 KO:K02357 OMA:YLHGTRI
ProtClustDB:PRK09377 Gene3D:3.30.479.20 PANTHER:PTHR11741
SUPFAM:SSF54713 TIGRFAMs:TIGR00116 RefSeq:YP_268296.1
ProteinModelPortal:Q485G9 SMR:Q485G9 STRING:Q485G9 PRIDE:Q485G9
GeneID:3522589 KEGG:cps:CPS_1554 PATRIC:21466315
BioCyc:CPSY167879:GI48-1635-MONOMER Uniprot:Q485G9
Length = 282
Score = 143 (55.4 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 39/112 (34%), Positives = 59/112 (52%)
Query: 25 SLLGKLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKELGWAKASKLAGRKTSQGLI 84
+++ +LR++T +CK AL E D+ A E ++ G AKA+K AG ++G I
Sbjct: 6 AMVKELRERTAAGMMDCKNALVEAEGDMELAI----ENMRKNGQAKAAKKAGNIAAEGAI 61
Query: 85 SIAVEGKHATMVEFNCETDFVARNKQFQGMAELISLACLNYTKTQVQPQEPF 136
I A +VE NC+TDFVA++ F G A ++ A L T + Q F
Sbjct: 62 LIKTTDGLAALVEVNCQTDFVAKDDNFLGFANEVADAALASKVTIAELQAQF 113
Score = 126 (49.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 61/244 (25%), Positives = 104/244 (42%)
Query: 61 EQAKELGWAKASKLAGRKTSQGLISIAVEGKHATMVEFNCETDFVARNKQFQGMAELISL 120
E ++ G AKA+K AG ++G I I A +VE NC+TDFVA++ F G A ++
Sbjct: 38 ENMRKNGQAKAAKKAGNIAAEGAILIKTTDGLAALVEVNCQTDFVAKDDNFLGFANEVAD 97
Query: 121 ACLNYTKTQVQPQEPFAKVFLDTAQLQSLAGPENKSLADHVAILISSVGENLVLRRAACV 180
A L +KV + A+LQ A E K + L++ +GEN+ +RR V
Sbjct: 98 AALA------------SKVTI--AELQ--AQFEEKRIT-----LVTKIGENINIRRVEYV 136
Query: 181 TVNEDHDVAGFTH------------PSPGLEHTGPILGKFGSLMVYQDLKTGDKQQNVQN 228
E ++A ++H + L+H + + D D N +
Sbjct: 137 ---EGANLASYSHGATIGVVVAGEGDAESLKHIAMHVAASKPEFLTPDDVPADVVANEKR 193
Query: 229 VARQLCQHVIGMNPKSIGSXXXXXXXXXXXXXI-MYHQEFLLDPTQYVGEVIVAAGIKPV 287
+ ++ + G P+ I + + Q F+++P + VG ++ GI
Sbjct: 194 IQIEMAMNE-G-KPQEIAEKMVTGRMKKFTGEVSLTGQAFIMEPKKTVGVILTEKGITVS 251
Query: 288 EFLR 291
F+R
Sbjct: 252 NFVR 255
>TIGR_CMR|SO_1630 [details] [associations]
symbol:SO_1630 "translation elongation factor Ts"
species:211586 "Shewanella oneidensis MR-1" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 GO:GO:0003746
EMBL:AE014299 GenomeReviews:AE014299_GR SUPFAM:SSF46934
eggNOG:COG0264 KO:K02357 OMA:YLHGTRI ProtClustDB:PRK09377
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
TIGRFAMs:TIGR00116 HOGENOM:HOG000220987 RefSeq:NP_717241.1
ProteinModelPortal:Q8EGH4 SMR:Q8EGH4 PRIDE:Q8EGH4 GeneID:1169424
KEGG:son:SO_1630 PATRIC:23522894 Uniprot:Q8EGH4
Length = 283
Score = 139 (54.0 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 35/90 (38%), Positives = 49/90 (54%)
Query: 29 KLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQAKELGWAKASKLAGRKTSQGLISIAV 88
+LR++TG +CKKAL E+ G E + K G AKA+K AG + G I I
Sbjct: 10 ELRERTGAGMMDCKKAL---EETNGDMELAIDNMRKS-GAAKAAKKAGNIAADGTILIKN 65
Query: 89 EGKHATMVEFNCETDFVARNKQFQGMAELI 118
A ++E NC+TDFVA++ F G A +
Sbjct: 66 GEGFAVLLEVNCQTDFVAKDANFLGFANAV 95
Score = 115 (45.5 bits), Expect = 0.00023, P = 0.00023
Identities = 66/254 (25%), Positives = 104/254 (40%)
Query: 49 EQDLGKAEKWLQEQAKELGWAKASKLAGRKTSQGLISIAVEGKHATMVEFNCETDFVARN 108
E+ G E + K G AKA+K AG + G I I A ++E NC+TDFVA++
Sbjct: 27 EETNGDMELAIDNMRKS-GAAKAAKKAGNIAADGTILIKNGEGFAVLLEVNCQTDFVAKD 85
Query: 109 KQFQGMAELISLACLNYTKTQVQPQEPFAKVFLDTAQLQSLAGPENKSLADHVAILISSV 168
F G A A L+ +KV L+ + Q E +A L++ +
Sbjct: 86 ANFLGFAN----AVLDVAAA--------SKVTLEDLKAQF----EEARVA-----LVAKI 124
Query: 169 GENLVLRRAACVTVNEDHDVAGFTHPSP-GLEHTGPILGKFGSLMVYQDLKTGDKQQNVQ 227
GEN+ +RR + + +A + H G+ TG + + + + N +
Sbjct: 125 GENINVRRVEYI---DGAKLASYRHGERIGVVVTGDADEETLKHLAMHVAASKPEYVNPE 181
Query: 228 NV-----AR-QLCQHVIGMN---PKSIGSXXXXXXXXXXXXXI-MYHQEFLLDPTQYVGE 277
+V AR Q Q I MN P I I + Q ++++P + VGE
Sbjct: 182 DVPADVVAREQALQIEISMNEGKPADIAEKMVVGRMKKFTGEISLTGQAYIMEPKKTVGE 241
Query: 278 VIVAAGIKPVEFLR 291
+ G K F+R
Sbjct: 242 FLKEKGAKVTNFIR 255
>UNIPROTKB|F8WCK2 [details] [associations]
symbol:TSFM "Elongation factor Ts, mitochondrial"
species:9606 "Homo sapiens" [GO:0003746 "translation elongation
factor activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR018101 Pfam:PF00627 PROSITE:PS01126
GO:GO:0005622 GO:GO:0003746 EMBL:AC025165 SUPFAM:SSF46934
PANTHER:PTHR11741 HGNC:HGNC:12367 IPI:IPI00917718
ProteinModelPortal:F8WCK2 SMR:F8WCK2 Ensembl:ENST00000417094
ArrayExpress:F8WCK2 Bgee:F8WCK2 Uniprot:F8WCK2
Length = 89
Score = 104 (41.7 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 22 TNKSLLGKLRKKTGYSFTNCKKALDLNEQDLGKAEKWLQEQA 63
++K LL KLR+KTGYSF NCKKAL+ DL + E QA
Sbjct: 45 SSKELLMKLRRKTGYSFVNCKKALETCGGDLKQTESCSVAQA 86
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.132 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 312 280 0.00082 115 3 11 22 0.37 34
33 0.41 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 36
No. of states in DFA: 603 (64 KB)
Total size of DFA: 200 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 21.88u 0.12s 22.00t Elapsed: 00:00:08
Total cpu time: 21.88u 0.12s 22.00t Elapsed: 00:00:11
Start: Thu Aug 15 16:58:08 2013 End: Thu Aug 15 16:58:19 2013